RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADCY9 (Homo sapiens)

Ensembl gene IDs: ENSG00000162104

Ensembl transcript IDs: ENST00000294016.8, ENST00000571467.1, ENST00000571889.1, ENST00000572288.1, ENST00000574721.1, ENST00000575550.5, ENST00000576936.5

Found 685 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTGCCCTGGACTCTCAGGACGCCGGGACCCTGGCTCTGGCTGTCCTaGTGGGTGGCCATCCCAGGCACCGCCCCTGGAGAGGTGGCGGGT +
Preference number: 1 (lower is better)
Translates to: VPWTLRTPGPWLWLS*WVAIPGTAPGEVAG
Trigger: ACCCGCCACCTCTCCAGGGGCGGTGCCTGGGATGGCCACCCATCAGGACAGCCAGAGCCAGGGTCCCGGCGTCCTGAGAGTCCAGGGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR GCA 90 bp TGTCTTGGCCTGCATGCATGTGGGCGAGCCCCTAAACCCGCTCAGTaGAGGGAGCGCGGCTCACCCACAGCCCACGGGGCGCGGTGCTCG +
Preference number: 1 (lower is better)
Translates to: CLGLHACGRAPKPAQ*RERGSPTAHGARCS
Trigger: CGAGCACCGCGCCCCGTGGGCTGTGGGTGAGCCGCGCTCCCTGCACTGAGCGGGTTTAGGGGCTCGCCCACATGCATGCAGGCCAAGACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR GCA 90 bp GACCCCCGAGGCCTGGGCACACGGGCGTCGTGCCCGGCTGGCATTTaGTGTCTTGGCCTGCATGCATGTGGGCGAGCCCCTAAACCCGCT +
Preference number: 1 (lower is better)
Translates to: DPRGLGTRASCPAGI*CLGLHACGRAPKPA
Trigger: AGCGGGTTTAGGGGCTCGCCCACATGCATGCAGGCCAAGACAGCAAATGCCAGCCGGGCACGACGCCCGTGTGCCCAGGCCTCGGGGGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR GCA 90 bp TGGGCACACGGGCGTCGTGCCCGGCTGGCATTTGCTGTCTTGGCCTaGATGCATGTGGGCGAGCCCCTAAACCCGCTCAGTGCAGGGAGC +
Preference number: 1 (lower is better)
Translates to: WAHGRRARLAFAVLA*MHVGEPLNPLSAGS
Trigger: GCTCCCTGCACTGAGCGGGTTTAGGGGCTCGCCCACATGCATGCAGGCCAAGACAGCAAATGCCAGCCGGGCACGACGCCCGTGTGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR GCA 90 bp GCCCATGTGACAGGAAGCACGCGGCCTTCGGCTCTCCGGATCGTGTaGAAATGTGCAGGGGGAGCCCCCGCGGGTGACGTCAGTGTGGAT +
Preference number: 1 (lower is better)
Translates to: AHVTGSTRPSALRIV*KCAGGAPAGDVSVD
Trigger: ATCCACACTGACGTCACCCGCGGGGGCTCCCCCTGCACATTTGCACACGATCCGGAGAGCCGAAGGCCGCGTGCTTCCTGTCACATGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR CCA 90 bp GGCTGTCCTGATGGGTGGCCATCCCAGGCACCGCCCCTGGAGAGGTaGCGGGTCAGAATTGTGACTTCTTCATGCCGGGGAGGGCAATCT +
Preference number: 1 (lower is better)
Translates to: GCPDGWPSQAPPLER*RVRIVTSSCRGGQS
Trigger: AGATTGCCCTCCCCGGCATGAAGAAGTCACAATTCTGACCCGCCACCTCTCCAGGGGCGGTGCCTGGGATGGCCACCCATCAGGACAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR TCA 90 bp AGGCCAGCCCTGAAGGCACTTGTTCTCCACCACGTGCTGAACGGATaGCCCAGAGGCAGCGGGGTTTCCAGGGAAGGGAGCGAAAGGGAA +
Preference number: 1 (lower is better)
Translates to: RPALKALVLHHVLNG*PRGSGVSREGSERE
Trigger: TTCCCTTTCGCTCCCTTCCCTGGAAACCCCGCTGCCTCTGGGTCATCCGTTCAGCACGTGGTGGAGAACAAGTGCCTTCAGGGCTGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR CCA 90 bp GTGCCATCTGAGAGCGGGAGGCAGCCAAGAAACTTCTGGAATTTGTaGAAGCCAAGATGGCACCGGTGCTGCCGGCACAGACCCCCGTGG +
Preference number: 1 (lower is better)
Translates to: VPSESGRQPRNFWNL*KPRWHRCCRHRPPW
Trigger: CCACGGGGGTCTGTGCCGGCAGCACCGGTGCCATCTTGGCTTCCACAAATTCCAGAAGTTTCTTGGCTGCCTCCCGCTCTCAGATGGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR TCA 90 bp GATTTGACAGCGGAAAGCAAAATGCACAGGGACAACGGGCAAGACTaGCAAGGAGTGCACCCTGGGCCTCATCAGCGTCCCGGGGTCCCC +
Preference number: 1 (lower is better)
Translates to: DLTAESKMHRDNGQD*QGVHPGPHQRPGVP
Trigger: GGGGACCCCGGGACGCTGATGAGGCCCAGGGTGCACTCCTTGTCAGTCTTGCCCGTTGTCCCTGTGCATTTTGCTTTCCGCTGTCAAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR GCA 90 bp GGGACGGGGAGGACCCGAGGGGCTTCGTGGCCCAGAGAGAACGTCTaGACTGGCTGTTTAGGAAGGCTCAGGGTGTTTGAAAGACAACGT +
Preference number: 1 (lower is better)
Translates to: GTGRTRGASWPRENV*TGCLGRLRVFERQR
Trigger: ACGTTGTCTTTCAAACACCCTGAGCCTTCCTAAACAGCCAGTGCAGACGTTCTCTCTGGGCCACGAAGCCCCTCGGGTCCTCCCCGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR GCA 90 bp AGACAAGAGATGCACGGCGTTTCCGCTGCAGAGATTCTGTGGTTCTaGACTGAGGTATGCATCGGAGCAGGGGACGGGGAGGACCCGAGG +
Preference number: 1 (lower is better)
Translates to: RQEMHGVSAAEILWF*TEVCIGAGDGEDPR
Trigger: CCTCGGGTCCTCCCCGTCCCCTGCTCCGATGCATACCTCAGTGCAGAACCACAGAATCTCTGCAGCGGAAACGCCGTGCATCTCTTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR GCA 90 bp GGTATTGCCACCCTGAAGCACGACCCATGCCGTCAGCAGCCCTCGTaGCAGCTGCTTAGAAACTCGTGTCTCCAGCACGATGTGCTCGCT +
Preference number: 1 (lower is better)
Translates to: GIATLKHDPCRQQPS*QLLRNSCLQHDVLA
Trigger: AGCGAGCACATCGTGCTGGAGACACGAGTTTCTAAGCAGCTGGCACGAGGGCTGCTGACGGCATGGGTCGTGCTTCAGGGTGGCAATACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR TCA 90 bp GCGGAGAACTTTGCGGAGCATGTTCTGAGCGAGACAGCAAGGTCGTaGGCAAACGCCCAGCCCCTCAAAGCTACACAGCCTGGAGGGGAA +
Preference number: 1 (lower is better)
Translates to: AENFAEHVLSETARS*ANAQPLKATQPGGE
Trigger: TTCCCCTCCAGGCTGTGTAGCTTTGAGGGGCTGGGCGTTTGCTCACGACCTTGCTGTCTCGCTCAGAACATGCTCCGCAAAGTTCTCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR TCA 90 bp CTGTTGGTGAGCTTCTCCTCTTGGGGAGGGCTGAGGAGCCCGTTCTaGGTTTTGGGATTAGGTCCTCCAGAAGCCTTGGGTGGATGCGCC +
Preference number: 1 (lower is better)
Translates to: LLVSFSSWGGLRSPF*VLGLGPPEALGGCA
Trigger: GGCGCATCCACCCAAGGCTTCTGGAGGACCTAATCCCAAAACTCAGAACGGGCTCCTCAGCCCTCCCCAAGAGGAGAAGCTCACCAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571467.1
3UTR GCA 90 bp AGCCCTCGTGCCAGCTGCTTAGAAACTCGTGTCTCCAGCACGATGTaGTCGCTGCCAACAGACAAGAGATGCACGGCGTTTCCGCTGCAG +
Preference number: 1 (lower is better)
Translates to: SPRASCLETRVSSTM*SLPTDKRCTAFPLQ
Trigger: CTGCAGCGGAAACGCCGTGCATCTCTTGTCTGTTGGCAGCGAGCACATCGTGCTGGAGACACGAGTTTCTAAGCAGCTGGCACGAGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR GCA 90 bp ACTCGTGTCTCCAGCACGATGTGCTCGCTGCCAACAGACAAGAGATaGACGGCGTTTCCGCTGCAGAGATTCTGTGGTTCTGCACTGAGG +
Preference number: 1 (lower is better)
Translates to: TRVSSTMCSLPTDKR*TAFPLQRFCGSALR
Trigger: CCTCAGTGCAGAACCACAGAATCTCTGCAGCGGAAACGCCGTGCATCTCTTGTCTGTTGGCAGCGAGCACATCGTGCTGGAGACACGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR GCA 90 bp TGCCCTAAGTTCCTAAGAGGTATTGCCACCCTGAAGCACGACCCATaGCGTCAGCAGCCCTCGTGCCAGCTGCTTAGAAACTCGTGTCTC +
Preference number: 1 (lower is better)
Translates to: CPKFLRGIATLKHDP*RQQPSCQLLRNSCL
Trigger: GAGACACGAGTTTCTAAGCAGCTGGCACGAGGGCTGCTGACGGCATGGGTCGTGCTTCAGGGTGGCAATACCTCTTAGGAACTTAGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR TCA 90 bp TTGATGGGGAAGAAGTGTGTGCGGAGAACTTTGCGGAGCATGTTCTaGGCGAGACAGCAAGGTCGTGAGCAAACGCCCAGCCCCTCAAAG +
Preference number: 1 (lower is better)
Translates to: LMGKKCVRRTLRSMF*ARQQGREQTPSPSK
Trigger: CTTTGAGGGGCTGGGCGTTTGCTCACGACCTTGCTGTCTCGCTCAGAACATGCTCCGCAAAGTTCTCCGCACACACTTCTTCCCCATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR CCA 90 bp GACAACTCGGGCGAGCTCACTTCCACACAAACTTCAGACTCAATATaGCAAAACATAATCAGACAGGACCAGCAGCCAACTGCCCGGACG +
Preference number: 1 (lower is better)
Translates to: DNSGELTSTQTSDSI*QNIIRQDQQPTART
Trigger: CGTCCGGGCAGTTGGCTGCTGGTCCTGTCTGATTATGTTTTGCCATATTGAGTCTGAAGTTTGTGTGGAAGTGAGCTCGCCCGAGTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR GCA 90 bp GGAGAGGAACTGACAGGAACAACAGCCATGAGCTTGTTACCTTGGTaGTGTTTTTATGCTCGTCTTGGCAGCCGTTTTGAGGTGCTCCTC +
Preference number: 1 (lower is better)
Translates to: GEELTGTTAMSLLPW*CFYARLGSRFEVLL
Trigger: GAGGAGCACCTCAAAACGGCTGCCAAGACGAGCATAAAAACAGCACCAAGGTAACAAGCTCATGGCTGTTGTTCCTGTCAGTTCCTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571467.1
3UTR TCA 90 bp TTCCAGGGAAGGGAGCGAAAGGGAAGAATGGATGAAAATGAACCCTaGATAACTGTGATCCACACAGAAGTTAGGGCTGAAATGACCACA +
Preference number: 1 (lower is better)
Translates to: FQGRERKGRMDENEP*ITVIHTEVRAEMTT
Trigger: TGTGGTCATTTCAGCCCTAACTTCTGTGTGGATCACAGTTATTCAGGGTTCATTTTCATCCATTCTTCCCTTTCGCTCCCTTCCCTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR CCA 90 bp ACTCCTTACCTCGAAAATCTAGAAATTCAAATGCAGACGTGTCTTTaGAAACTACAAATGATTACAGCCCATGTGACAGGAAGCACGCGG +
Preference number: 1 (lower is better)
Translates to: TPYLENLEIQMQTCL*KLQMITAHVTGSTR
Trigger: CCGCGTGCTTCCTGTCACATGGGCTGTAATCATTTGTAGTTTCCAAAGACACGTCTGCATTTGAATTTCTAGATTTTCGAGGTAAGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR TCA 90 bp CTGCCGGCACAGACCCCCGTGGTTCTGAGCTGGACCCCGGCAGGGAGGAGCCCCGGTGAGAGGCGGCTCTaGGACCCCCGAGGCCTGGGC +
Preference number: 2 (lower is better)
Translates to: LPAQTPVVLSWTPAGRSPGERRL*DPRGLG
Trigger: GCCCAGGCCTCGGGGGTCTCAGAGCCGCCTCTCACC...GGGGCTCCTCCCTGCCGGGGTCCAGCTCAGAACCACGGGGGTCTGTGCCGGCAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR CCA 90 bp CAGGGGGAGCCCCCGCGGGTGACGTCAGTGTGGATGAAGTCACGGGTGTGGCAGAGGAGCCCCCGTGGGTaGCAGGGGCAGCTGGTGGGC +
Preference number: 2 (lower is better)
Translates to: QGEPPRVTSVWMKSRVWQRSPRG*QGQLVG
Trigger: GCCCACCAGCTGCCCCTGCCACCCACGGGGGCTCCT...CTGCCACACCCGTGACTTCATCCACACTGACGTCACCCGCGGGGGCTCCCCCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR CCA 90 bp GCAGCCAACTGCCCGGACGGAGCTCCCCCACACCACCCTCGGGATTCCGCCCCTGGCGTCGTGCCCGGCTaGCATTTGCTGTCTTGGCCT +
Preference number: 2 (lower is better)
Translates to: AANCPDGAPPHHPRDSAPGVVPG*HLLSWP
Trigger: AGGCCAAGACAGCAAATGCCAGCCGGGCACGACGCC...AGGGGCGGAATCCCGAGGGTGGTGTGGGGGAGCTCCGTCCGGGCAGTTGGCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR CAA 90 bp GAGGCCTGGGCACACGGGCGTCGTGCCCGGCTGGCATTTGCTGTCTaGGCCTGCATGCATGTGGGCGAGCCCCTAAACCCGCTCAGTGCA +
Preference number: 2 (lower is better)
Translates to: EAWAHGRRARLAFAV*ACMHVGEPLNPLSA
Trigger: TGCACTGAGCGGGTTTAGGGGCTCGCCCACATGCATGCAGGCCAAGACAGCAAATGCCAGCCGGGCACGACGCCCGTGTGCCCAGGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR GCA 90 bp CAGGGGGAGCCCCCGCGGGTGACGTCAGTGTGGATGAAGTCACGGGTGTGGCAGCGTCAGCAGCCCTCGTaGCAGCTGCTTAGAAACTCG +
Preference number: 2 (lower is better)
Translates to: QGEPPRVTSVWMKSRVWQRQQPS*QLLRNS
Trigger: CGAGTTTCTAAGCAGCTGGCACGAGGGCTGCTGACG...CTGCCACACCCGTGACTTCATCCACACTGACGTCACCCGCGGGGGCTCCCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR CCA 90 bp CGTGGGTGGCAGGGGCAGCTGGTGGGCTTCTCCTATTCCCCTAGCCTCAGAATTAGTGCGGGTGGGCAATaGGGGGTGGCGGAGCTGTCG +
Preference number: 2 (lower is better)
Translates to: RGWQGQLVGFSYSPSLRISAGGQ*GVAELS
Trigger: CGACAGCTCCGCCACCCCCCATTGCCCACCCGCACT...AATTCTGAGGCTAGGGGAATAGGAGAAGCCCACCAGCTGCCCCTGCCACCCACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR CCA 90 bp CCAGCACGATGTGCTCGCTGCCAACAGACAAGAGATGCACGGCGTTTCCGCTGCCCCGTGGTTCTGAGCTaGACCCCGGCAGGGAGGAGC +
Preference number: 2 (lower is better)
Translates to: PARCARCQQTRDARRFRCPVVLS*TPAGRS
Trigger: GCTCCTCCCTGCCGGGGTCCAGCTCAGAACCACGGG...GCAGCGGAAACGCCGTGCATCTCTTGTCTGTTGGCAGCGAGCACATCGTGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR CCA 90 bp CAGGGGGAGCCCCCGCGGGTGACGTCAGTGTGGATGAAGTCACGGGTGTGGCAGGGTCCCCTGAAAGACTaGCTACAACTCCGACCGGAC +
Preference number: 2 (lower is better)
Translates to: QGEPPRVTSVWMKSRVWQGPLKD*LQLRPD
Trigger: GTCCGGTCGGAGTTGTAGCCAGTCTTTCAGGGGACC...CTGCCACACCCGTGACTTCATCCACACTGACGTCACCCGCGGGGGCTCCCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR CCA 90 bp AGCAAGGTCGTGAGCAAACGCCCAGCCCCTCAAAGCTACACAGCCTGGAGGGGACCCAGGCACCGCCCCTaGAGAGGTGGCGGGTCAGAA +
Preference number: 2 (lower is better)
Translates to: SKVVSKRPAPQSYTAWRGPRHRP*RGGGSE
Trigger: TTCTGACCCGCCACCTCTCCAGGGGCGGTGCCTGGG...TCCCCTCCAGGCTGTGTAGCTTTGAGGGGCTGGGCGTTTGCTCACGACCTTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR GCA 90 bp TCATCAGCGTCCCGGGGTCCCCTGAAAGACTGGCTACAACTCCGACCGGACAACGGCACACGGGCGTCGTaGCCGGCTGGCATTTGCTGT +
Preference number: 2 (lower is better)
Translates to: SSASRGPLKDWLQLRPDNGTRAS*PAGICC
Trigger: ACAGCAAATGCCAGCCGGGCACGACGCCCGTGTGCC...GTTGTCCGGTCGGAGTTGTAGCCAGTCTTTCAGGGGACCCCGGGACGCTGATGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR GCA 90 bp CTTTGCGGAGCATGTTCTGAGCGAGACAGCAAGGTCGTGAGCAAACGCCCAGCCAGATGGCACCGGTGCTaGCGGCACAGACCCCCGTGG +
Preference number: 2 (lower is better)
Translates to: LCGACSERDSKVVSKRPARWHRC*RHRPPW
Trigger: CCACGGGGGTCTGTGCCGGCAGCACCGGTGCCATCT...GGCTGGGCGTTTGCTCACGACCTTGCTGTCTCGCTCAGAACATGCTCCGCAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR CCA 90 bp TCATCAGCGTCCCGGGGTCCCCTGAAAGACTGGCTACAACTCCGACCGGACAACCACCTCCACTCCCGATaGGGAGACCCCTGGGTGGAG +
Preference number: 2 (lower is better)
Translates to: SSASRGPLKDWLQLRPDNHLHSR*GDPWVE
Trigger: CTCCACCCAGGGGTCTCCCCATCGGGAGTGGAGGTG...GTTGTCCGGTCGGAGTTGTAGCCAGTCTTTCAGGGGACCCCGGGACGCTGATGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR CCA 90 bp CAGGGGGAGCCCCCGCGGGTGACGTCAGTGTGGATGAAGTCACGGGTGTGGCAGATCTGGTTACCTTCCTaGGAACTGCCCTCCCCTGTG +
Preference number: 2 (lower is better)
Translates to: QGEPPRVTSVWMKSRVWQIWLPS*ELPSPV
Trigger: CACAGGGGAGGGCAGTTCCCAGGAAGGTAACCAGAT...CTGCCACACCCGTGACTTCATCCACACTGACGTCACCCGCGGGGGCTCCCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR TCA 90 bp CTTTGCGGAGCATGTTCTGAGCGAGACAGCAAGGTCGTGAGCAAACGCCCAGCCAGGCCCTGTGCCATCTaGGAGCGGGAGGCAGCCAAG +
Preference number: 2 (lower is better)
Translates to: LCGACSERDSKVVSKRPARPCAI*EREAAK
Trigger: CTTGGCTGCCTCCCGCTCTCAGATGGCACAGGGCCT...GGCTGGGCGTTTGCTCACGACCTTGCTGTCTCGCTCAGAACATGCTCCGCAAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR GCA 90 bp CAGGGGGAGCCCCCGCGGGTGACGTCAGTGTGGATGAAGTCACGGGTGTGGCAGCAGCGGAAAGCAAAATaGACAGGGACAACGGGCAAG +
Preference number: 2 (lower is better)
Translates to: QGEPPRVTSVWMKSRVWQQRKAK*TGTTGK
Trigger: CTTGCCCGTTGTCCCTGTGCATTTTGCTTTCCGCTG...CTGCCACACCCGTGACTTCATCCACACTGACGTCACCCGCGGGGGCTCCCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR GCA 90 bp AAGCCTTGGGTGGATGCGCCAGGAGAGGAACTGACAGGAACAACAGCCATGAGCGCAGCCGTTTTGAGGTaGTCCTCCCTCGGCGCCGGC +
Preference number: 2 (lower is better)
Translates to: KPWVDAPGEELTGTTAMSAAVLR*SSLGAG
Trigger: GCCGGCGCCGAGGGAGGAGCACCTCAAAACGGCTGC...GCTCATGGCTGTTGTTCCTGTCAGTTCCTCTCCTGGCGCATCCACCCAAGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571467.1
3UTR-3UTR TCA 90 bp TCATCAGCGTCCCGGGGTCCCCTGAAAGACTGGCTACAACTCCGACCGGACAACGCACTGGCCATGCTTTaGGGTCCCACTCAGACCCCT +
Preference number: 2 (lower is better)
Translates to: SSASRGPLKDWLQLRPDNALAML*GPTQTP
Trigger: AGGGGTCTGAGTGGGACCTCAAAGCATGGCCAGTGC...GTTGTCCGGTCGGAGTTGTAGCCAGTCTTTCAGGGGACCCCGGGACGCTGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR CCA 90 bp CGGGCAAGACTGACAAGGAGTGCACCCTGGGCCTCATCAGCGTCCCGGGGTCCCGGCAACTGTGGCGCTTaGAAAGCACAACAGCCAAAT +
Preference number: 2 (lower is better)
Translates to: RARLTRSAPWASSASRGPGNCGA*KAQQPN
Trigger: ATTTGGCTGTTGTGCTTTCCAAGCGCCACAGTTGCC...GGGACCCCGGGACGCTGATGAGGCCCAGGGTGCACTCCTTGTCAGTCTTGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR CCA 90 bp CCAGCACGATGTGCTCGCTGCCAACAGACAAGAGATGCACGGCGTTTCCGCTGCTTGTGGAAGCCAAGATaGCACCGGTGCTGCCGGCAC +
Preference number: 2 (lower is better)
Translates to: PARCARCQQTRDARRFRCLWKPR*HRCCRH
Trigger: GTGCCGGCAGCACCGGTGCCATCTTGGCTTCCACAA...GCAGCGGAAACGCCGTGCATCTCTTGTCTGTTGGCAGCGAGCACATCGTGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR TCA 90 bp CAGGGGGAGCCCCCGCGGGTGACGTCAGTGTGGATGAAGTCACGGGTGTGGCAGCGAGACAGTGAGATTTaGCAGCGGAAAGCAAAATGC +
Preference number: 2 (lower is better)
Translates to: QGEPPRVTSVWMKSRVWQRDSEI*QRKAKC
Trigger: GCATTTTGCTTTCCGCTGTCAAATCTCACTGTCTCG...CTGCCACACCCGTGACTTCATCCACACTGACGTCACCCGCGGGGGCTCCCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR TCA 90 bp CAGGGGGAGCCCCCGCGGGTGACGTCAGTGTGGATGAAGTCACGGGTGTGGCAGGTGAAAACGAGACAGTaGGATTTGACAGCGGAAAGC +
Preference number: 2 (lower is better)
Translates to: QGEPPRVTSVWMKSRVWQVKTRQ*DLTAES
Trigger: GCTTTCCGCTGTCAAATCTCACTGTCTCGTTTTCAC...CTGCCACACCCGTGACTTCATCCACACTGACGTCACCCGCGGGGGCTCCCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR TCA 90 bp TTGGGGAGGGCTGAGGAGCCCGTTCTGAGTTTTGGGATTAGGTCCTCCAGAAGCTCTTGGCAGCCGTTTTaGGGTGCTCCTCCCTCGGCG +
Preference number: 2 (lower is better)
Translates to: LGRAEEPVLSFGIRSSRSSWQPF*GAPPSA
Trigger: CGCCGAGGGAGGAGCACCTCAAAACGGCTGCCAAGA...GCTTCTGGAGGACCTAATCCCAAAACTCAGAACGGGCTCCTCAGCCCTCCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000571467.1
3UTR-3UTR GCA 90 bp GAAGGCTCAGGGTGTTTGAAAGACAACGTTAAGCTCTGGGTGAGTCTGCACGGGCCAAGATGGCACCGGTaGTGCCGGCACAGACCCCCG +
Preference number: 2 (lower is better)
Translates to: EGSGCLKDNVKLWVSLHGPRWHR*CRHRPP
Trigger: CGGGGGTCTGTGCCGGCAGCACCGGTGCCATCTTGG...CCCGTGCAGACTCACCCAGAGCTTAACGTTGTCTTTCAAACACCCTGAGCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR TCA 90 bp CTTTGCGGAGCATGTTCTGAGCGAGACAGCAAGGTCGTGAGCAAACGCCCAGCCTTCTCCACCACGTGCTaGACGGATGACCCAGAGGCA +
Preference number: 2 (lower is better)
Translates to: LCGACSERDSKVVSKRPAFSTTC*TDDPEA
Trigger: TGCCTCTGGGTCATCCGTTCAGCACGTGGTGGAGAA...GGCTGGGCGTTTGCTCACGACCTTGCTGTCTCGCTCAGAACATGCTCCGCAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR CCA 90 bp GCAGCCAACTGCCCGGACGGAGCTCCCCCACACCACCCTCGGGATTCCGCCCCTAGCGAAAGGGAAGAATaGATGAAAATGAACCCTGAA +
Preference number: 2 (lower is better)
Translates to: AANCPDGAPPHHPRDSAPSEREE*MKMNPE
Trigger: TTCAGGGTTCATTTTCATCCATTCTTCCCTTTCGCT...AGGGGCGGAATCCCGAGGGTGGTGTGGGGGAGCTCCGTCCGGGCAGTTGGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR CCA 90 bp CGTGGGTGGCAGGGGCAGCTGGTGGGCTTCTCCTATTCCCCTAGCCTCAGAATTTGGCATTTGCTGTCTTaGCCTGCATGCATGTGGGCG +
Preference number: 2 (lower is better)
Translates to: RGWQGQLVGFSYSPSLRIWHLLS*PACMWA
Trigger: CGCCCACATGCATGCAGGCCAAGACAGCAAATGCCA...AATTCTGAGGCTAGGGGAATAGGAGAAGCCCACCAGCTGCCCCTGCCACCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR TCA 90 bp TGCAAATGTGCAGGGGGAGCCCCCGCGGGTGACGTCAGTGTGGATGAAGTCACGCTTGGTTTCCCGGGGTaGGGAATCACAAACACCTTT +
Preference number: 2 (lower is better)
Translates to: CKCAGGAPAGDVSVDEVTLGFPG*GITNTF
Trigger: AAAGGTGTTTGTGATTCCTCACCCCGGGAAACCAAG...CGTGACTTCATCCACACTGACGTCACCCGCGGGGGCTCCCCCTGCACATTTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR TCA 90 bp ACGTCCACAAAGTGGGCGTCCGTTTTCTCCCGGATGTTCTTGAACCTCAGCGGACCTCTTGGGGAGGGCTaGGGAGCCCGTTCTGAGTTT +
Preference number: 2 (lower is better)
Translates to: TSTKWASVFSRMFLNLSGPLGEG*GARSEF
Trigger: AAACTCAGAACGGGCTCCTCAGCCCTCCCCAAGAGG...TCCGCTGAGGTTCAAGAACATCCGGGAGAAAACGGACGCCCACTTTGTGGACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571467.1
3UTR-3UTR TCA 90 bp GTTCTTGAACCTCAGCGGAAGGAGAGCCGACTGGTCCAGGCTCACCCCTGCCCATCACACAGAGAAGTCTaGCTGTTGGTGAGCTTCTCC +
Preference number: 2 (lower is better)
Translates to: VLEPQRKESRLVQAHPCPSHREV*LLVSFS
Trigger: GGAGAAGCTCACCAACAGTCAGACTTCTCTGTGTGA...TGGGCAGGGGTGAGCCTGGACCAGTCGGCTCTCCTTCCGCTGAGGTTCAAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571467.1
3UTR-3UTR GCA 90 bp GAAGGCTCAGGGTGTTTGAAAGACAACGTTAAGCTCTGGGTGAGTCTGCACGGGGGAGCTGTCGTGACATaGCCCCTTCGCACCCCCTCT +
Preference number: 2 (lower is better)
Translates to: EGSGCLKDNVKLWVSLHGGAVVT*PLRTPS
Trigger: AGAGGGGGTGCGAAGGGGGCATGTCACGACAGCTCC...CCCGTGCAGACTCACCCAGAGCTTAACGTTGTCTTTCAAACACCCTGAGCCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR CAA 90 bp TTGATAACGTCCACAAAGTGGGCGTCCGTTTTCTCCCGGATGTTCTaGAACCTCAGCGGAAGGAGAGCCGACTGGTCCAGGCTCACCCCT +
Preference number: 2 (lower is better)
Translates to: LITSTKWASVFSRMF*NLSGRRADWSRLTP
Trigger: AGGGGTGAGCCTGGACCAGTCGGCTCTCCTTCCGCTGAGGTTCAAGAACATCCGGGAGAAAACGGACGCCCACTTTGTGGACGTTATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571467.1
3UTR-3UTR TCA 90 bp TGCCGTCAGCAGCCCTCGTGCCAGCTGCTTAGAAACTCGTGTCTCCAGCACGATGGAAGGAAATGGGCTTaGTGGGGAAGAAGTGTGTGC +
Preference number: 2 (lower is better)
Translates to: CRQQPSCQLLRNSCLQHDGRKWA*WGRSVC
Trigger: GCACACACTTCTTCCCCATCAAGCCCATTTCCTTCC...ATCGTGCTGGAGACACGAGTTTCTAAGCAGCTGGCACGAGGGCTGCTGACGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR CCA 90 bp GTGGCCAAAACACAAAAGAGACATCTGGTTACCTTCCTGGGAACTGCCCTCCCCAGCCATGATCTCCACTaGCGGCCTCTGTCCCGAGAC +
Preference number: 2 (lower is better)
Translates to: VAKTQKRHLVTFLGTALPSHDLH*RPLSRD
Trigger: GTCTCGGGACAGAGGCCGCCAGTGGAGATCATGGCT...GGGGAGGGCAGTTCCCAGGAAGGTAACCAGATGTCTCTTTTGTGTTTTGGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR CCA 90 bp TTGGCCTGCATGCATGTGGGCGAGCCCCTAAACCCGCTCAGTGCAGGGAGCGCGGAAAATAGTGTCTCGTaGGACGTGGGAAAAAGCAAT +
Preference number: 2 (lower is better)
Translates to: LACMHVGEPLNPLSAGSAENSVS*DVGKSN
Trigger: ATTGCTTTTTCCCACGTCCCACGAGACACTATTTTC...CGCGCTCCCTGCACTGAGCGGGTTTAGGGGCTCGCCCACATGCATGCAGGCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR TCA 90 bp CGAGACAGCAAGGTCGTGAGCAAACGCCCAGCCCCTCAAAGCTACACAGCCTGGAGAAAGAGCTTCATGTaGCCACAATCCCCACGAACA +
Preference number: 2 (lower is better)
Translates to: RDSKVVSKRPAPQSYTAWRKSFM*PQSPRT
Trigger: TGTTCGTGGGGATTGTGGTCACATGAAGCTCTTTCT...CCAGGCTGTGTAGCTTTGAGGGGCTGGGCGTTTGCTCACGACCTTGCTGTCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR GCA 90 bp GTGGCCAAAACACAAAAGAGACATCTGGTTACCTTCCTGGGAACTGCCCTCCCCTTTGCTGTCTTGGCCTaGATGCATGTGGGCGAGCCC +
Preference number: 2 (lower is better)
Translates to: VAKTQKRHLVTFLGTALPFAVLA*MHVGEP
Trigger: GGGCTCGCCCACATGCATGCAGGCCAAGACAGCAAA...GGGGAGGGCAGTTCCCAGGAAGGTAACCAGATGTCTCTTTTGTGTTTTGGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR CCA 90 bp CAAGATCTCACACAGAGAAGTCTGACTGTTGGTGAGCTTCTCCTCTTGGGGAGGGTCCTCCAGAAGCCTTaGGTGGATGCGCCAGGAGAG +
Preference number: 2 (lower is better)
Translates to: QDLTQRSLTVGELLLLGRVLQKP*VDAPGE
Trigger: CTCTCCTGGCGCATCCACCCAAGGCTTCTGGAGGAC...CCTCCCCAAGAGGAGAAGCTCACCAACAGTCAGACTTCTCTGTGTGAGATCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571467.1
3UTR-3UTR CCA 90 bp GACAACGTTAAGCTCTGGGTGAGTCTGCACGGGGCTGAACCAGACTCCACTTTGCTTCGCACCCCCTCTTaGCGGATTACTGGCACTTTA +
Preference number: 2 (lower is better)
Translates to: DNVKLWVSLHGAEPDSTLLRTPS*RITGTL
Trigger: TAAAGTGCCAGTAATCCGCCAAGAGGGGGTGCGAAG...CAAAGTGGAGTCTGGTTCAGCCCCGTGCAGACTCACCCAGAGCTTAACGTTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR CAA 90 bp CAAGATCTCACACAGAGAAGTCTGACTGTTGGTGAGCTTCTCCTCTaGGGGAGGGCTGAGGAGCCCGTTCTGAGTTTTGGGATTAGGTCC +
Preference number: 2 (lower is better)
Translates to: QDLTQRSLTVGELLL*GRAEEPVLSFGIRS
Trigger: GGACCTAATCCCAAAACTCAGAACGGGCTCCTCAGCCCTCCCCAAGAGGAGAAGCTCACCAACAGTCAGACTTCTCTGTGTGAGATCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571467.1
3UTR-3UTR TCA 90 bp GAAGGCTCAGGGTGTTTGAAAGACAACGTTAAGCTCTGGGTGAGTCTGCACGGGGGAAGACCAGCAAACTaGCAGTCACACCTGACAGGA +
Preference number: 2 (lower is better)
Translates to: EGSGCLKDNVKLWVSLHGGRPAN*QSHLTG
Trigger: TCCTGTCAGGTGTGACTGTCAGTTTGCTGGTCTTCC...CCCGTGCAGACTCACCCAGAGCTTAACGTTGTCTTTCAAACACCCTGAGCCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR GCA 90 bp AGGGGAGGACATTCAAATATACACCTTAATACTGATGCAGAAAGAGCTTCATGTGCCCACGGGGCGCGGTaGTCGGGAAAGTGCGGGTGG +
Preference number: 2 (lower is better)
Translates to: RGGHSNIHLNTDAERASCAHGAR*SGKCGW
Trigger: CCACCCGCACTTTCCCGAGCACCGCGCCCCGTGGGC...ACATGAAGCTCTTTCTGCATCAGTATTAAGGTGTATATTTGAATGTCCTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR CCA 90 bp AGGGGAGGACATTCAAATATACACCTTAATACTGATGCAGAAAGAGCTTCATGTGAGACCCCCGAGGCCTaGGCACACGGGCGTCGTGCC +
Preference number: 2 (lower is better)
Translates to: RGGHSNIHLNTDAERASCETPEA*AHGRRA
Trigger: GGCACGACGCCCGTGTGCCCAGGCCTCGGGGGTCTC...ACATGAAGCTCTTTCTGCATCAGTATTAAGGTGTATATTTGAATGTCCTCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR TCA 90 bp GACAACGTTAAGCTCTGGGTGAGTCTGCACGGGGCTGAACCAGACTCCACTTTGAAGTTAGGGCTGAAATaGCCACATAACACCACGTCC +
Preference number: 2 (lower is better)
Translates to: DNVKLWVSLHGAEPDSTLKLGLK*PHNTTS
Trigger: GGACGTGGTGTTATGTGGTCATTTCAGCCCTAACTT...CAAAGTGGAGTCTGGTTCAGCCCCGTGCAGACTCACCCAGAGCTTAACGTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR GCA 90 bp GAAGGCTCAGGGTGTTTGAAAGACAACGTTAAGCTCTGGGTGAGTCTGCACGGGGAATTGCACTGGCCATaGTTTGAGGTCCCACTCAGA +
Preference number: 2 (lower is better)
Translates to: EGSGCLKDNVKLWVSLHGELHWP*FEVPLR
Trigger: TCTGAGTGGGACCTCAAAGCATGGCCAGTGCAATTC...CCCGTGCAGACTCACCCAGAGCTTAACGTTGTCTTTCAAACACCCTGAGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR GCA 90 bp TCCGTTTTCTCCCGGATGTTCTTGAACCTCAGCGGAAGGAGAGCCGACTGGTCCTTGGTGCTGTTTTTATaGTCGTCTTGGCAGCCGTTT +
Preference number: 2 (lower is better)
Translates to: SVFSRMFLNLSGRRADWSLVLFL*SSWQPF
Trigger: AAACGGCTGCCAAGACGAGCATAAAAACAGCACCAA...GGACCAGTCGGCTCTCCTTCCGCTGAGGTTCAAGAACATCCGGGAGAAAACGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571467.1
3UTR CAA 90 bp GTGGATGCGCCAGGAGAGGAACTGACAGGAACAACAGCCATGAGCTaGTTACCTTGGTGCTGTTTTTATGCTCGTCTTGGCAGCCGTTTT +
Preference number: 2 (lower is better)
Translates to: VDAPGEELTGTTAMS*LPWCCFYARLGSRF
Trigger: AAAACGGCTGCCAAGACGAGCATAAAAACAGCACCAAGGTAACAAGCTCATGGCTGTTGTTCCTGTCAGTTCCTCTCCTGGCGCATCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571467.1
3UTR-3UTR TCA 90 bp TTGATAACGTCCACAAAGTGGGCGTCCGTTTTCTCCCGGATGTTCTTGAACCTCCTGAGGAGCCCGTTCTaGGTTTTGGGATTAGGTCCT +
Preference number: 2 (lower is better)
Translates to: LITSTKWASVFSRMFLNLLRSPF*VLGLGP
Trigger: AGGACCTAATCCCAAAACTCAGAACGGGCTCCTCAG...GAGGTTCAAGAACATCCGGGAGAAAACGGACGCCCACTTTGTGGACGTTATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571467.1
3UTR-3UTR TCA 90 bp TTGATAACGTCCACAAAGTGGGCGTCCGTTTTCTCCCGGATGTTCTTGAACCTCAAGTCTGACTGTTGGTaGGCTTCTCCTCTTGGGGAG +
Preference number: 2 (lower is better)
Translates to: LITSTKWASVFSRMFLNLKSDCW*ASPLGE
Trigger: CTCCCCAAGAGGAGAAGCTCACCAACAGTCAGACTT...GAGGTTCAAGAACATCCGGGAGAAAACGGACGCCCACTTTGTGGACGTTATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571467.1
3UTR-3UTR CCA 90 bp GACAACGTTAAGCTCTGGGTGAGTCTGCACGGGGCTGAACCAGACTCCACTTTGCACAAAAGAGACATCTaGTTACCTTCCTGGGAACTG +
Preference number: 2 (lower is better)
Translates to: DNVKLWVSLHGAEPDSTLHKRDI*LPSWEL
Trigger: CAGTTCCCAGGAAGGTAACCAGATGTCTCTTTTGTG...CAAAGTGGAGTCTGGTTCAGCCCCGTGCAGACTCACCCAGAGCTTAACGTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR TCA 90 bp ACTCCTTACCTCGAAAATCTAGAAATTCAAATGCAGACGTGTCTTTGGAAACTAGTGGCGGAGCTGTCGTaGCATGCCCCCTTCGCACCC +
Preference number: 2 (lower is better)
Translates to: TPYLENLEIQMQTCLWKLVAELS*HAPFAP
Trigger: GGGTGCGAAGGGGGCATGTCACGACAGCTCCGCCAC...TAGTTTCCAAAGACACGTCTGCATTTGAATTTCTAGATTTTCGAGGTAAGGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR TCA 90 bp ACTCCTTACCTCGAAAATCTAGAAATTCAAATGCAGACGTGTCTTTGGAAACTAAGACCCCCGTGGTTCTaGGCTGGACCCCGGCAGGGA +
Preference number: 2 (lower is better)
Translates to: TPYLENLEIQMQTCLWKLRPPWF*AGPRQG
Trigger: TCCCTGCCGGGGTCCAGCTCAGAACCACGGGGGTCT...TAGTTTCCAAAGACACGTCTGCATTTGAATTTCTAGATTTTCGAGGTAAGGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR GCA 90 bp AGGGGAGGACATTCAAATATACACCTTAATACTGATGCAGAAAGAGCTTCATGTCCTAAACCCGCTCAGTaGAGGGAGCGCGGCTCACCC +
Preference number: 2 (lower is better)
Translates to: RGGHSNIHLNTDAERASCPKPAQ*RERGSP
Trigger: GGGTGAGCCGCGCTCCCTGCACTGAGCGGGTTTAGG...ACATGAAGCTCTTTCTGCATCAGTATTAAGGTGTATATTTGAATGTCCTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR CCA 90 bp CGAGACAGCAAGGTCGTGAGCAAACGCCCAGCCCCTCAAAGCTACACAGCCTGGACTTCAGACTCAATATaGCAAAACATAATCAGACAG +
Preference number: 2 (lower is better)
Translates to: RDSKVVSKRPAPQSYTAWTSDSI*QNIIRQ
Trigger: CTGTCTGATTATGTTTTGCCATATTGAGTCTGAAGT...CCAGGCTGTGTAGCTTTGAGGGGCTGGGCGTTTGCTCACGACCTTGCTGTCTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR TCA 90 bp ACTCCTTACCTCGAAAATCTAGAAATTCAAATGCAGACGTGTCTTTGGAAACTAGGCCGAGGCCAGCCCTaGAGGCACTTGTTCTCCACC +
Preference number: 2 (lower is better)
Translates to: TPYLENLEIQMQTCLWKLGRGQP*RHLFST
Trigger: GGTGGAGAACAAGTGCCTTCAGGGCTGGCCTCGGCC...TAGTTTCCAAAGACACGTCTGCATTTGAATTTCTAGATTTTCGAGGTAAGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR TCA 90 bp GAAGGCTCAGGGTGTTTGAAAGACAACGTTAAGCTCTGGGTGAGTCTGCACGGGGATGAAAATGAACCCTaGATAACTGTGATCCACACA +
Preference number: 2 (lower is better)
Translates to: EGSGCLKDNVKLWVSLHGDENEP*ITVIHT
Trigger: TGTGTGGATCACAGTTATTCAGGGTTCATTTTCATC...CCCGTGCAGACTCACCCAGAGCTTAACGTTGTCTTTCAAACACCCTGAGCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR CCA 90 bp GTGGCCAAAACACAAAAGAGACATCTGGTTACCTTCCTGGGAACTGCCCTCCCCCTCTTGGCGGATTACTaGCACTTTATATCAGATTCA +
Preference number: 2 (lower is better)
Translates to: VAKTQKRHLVTFLGTALPLLADY*HFISDS
Trigger: TGAATCTGATATAAAGTGCCAGTAATCCGCCAAGAG...GGGGAGGGCAGTTCCCAGGAAGGTAACCAGATGTCTCTTTTGTGTTTTGGCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR TCA 90 bp AGGGGAGGACATTCAAATATACACCTTAATACTGATGCAGAAAGAGCTTCATGTTATTTCCCTCTCCGATaGGTCAGCTTCCAGGACCAA +
Preference number: 2 (lower is better)
Translates to: RGGHSNIHLNTDAERASCYFPLR*VSFQDQ
Trigger: TTGGTCCTGGAAGCTGACTCATCGGAGAGGGAAATA...ACATGAAGCTCTTTCTGCATCAGTATTAAGGTGTATATTTGAATGTCCTCCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR TCA 90 bp AGGGGAGGACATTCAAATATACACCTTAATACTGATGCAGAAAGAGCTTCATGTAGTGATGATGGGGACTaGTGCGGTGTGAAAACGAGA +
Preference number: 2 (lower is better)
Translates to: RGGHSNIHLNTDAERASCSDDGD*CGVKTR
Trigger: TCTCGTTTTCACACCGCATCAGTCCCCATCATCACT...ACATGAAGCTCTTTCTGCATCAGTATTAAGGTGTATATTTGAATGTCCTCCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR CCA 90 bp ACTCCTTACCTCGAAAATCTAGAAATTCAAATGCAGACGTGTCTTTGGAAACTAGCCTCAGAATTGCACTaGCCATGCTTTGAGGTCCCA +
Preference number: 2 (lower is better)
Translates to: TPYLENLEIQMQTCLWKLASELH*PCFEVP
Trigger: TGGGACCTCAAAGCATGGCCAGTGCAATTCTGAGGC...TAGTTTCCAAAGACACGTCTGCATTTGAATTTCTAGATTTTCGAGGTAAGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR GCA 90 bp ACTCCTTACCTCGAAAATCTAGAAATTCAAATGCAGACGTGTCTTTGGAAACTAGAGATTCTGTGGTTCTaGACTGAGGTATGCATCGGA +
Preference number: 2 (lower is better)
Translates to: TPYLENLEIQMQTCLWKLEILWF*TEVCIG
Trigger: TCCGATGCATACCTCAGTGCAGAACCACAGAATCTC...TAGTTTCCAAAGACACGTCTGCATTTGAATTTCTAGATTTTCGAGGTAAGGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR CCA 90 bp ACTCCTTACCTCGAAAATCTAGAAATTCAAATGCAGACGTGTCTTTGGAAACTATCACAAACACCTTTGTaGTTGGGGAAGGAAATGGGC +
Preference number: 2 (lower is better)
Translates to: TPYLENLEIQMQTCLWKLSQTPL*LGKEMG
Trigger: GCCCATTTCCTTCCCCAACCACAAAGGTGTTTGTGA...TAGTTTCCAAAGACACGTCTGCATTTGAATTTCTAGATTTTCGAGGTAAGGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR CCA 90 bp AGGGGAGGACATTCAAATATACACCTTAATACTGATGCAGAAAGAGCTTCATGTGTGTCTCGTGGGACGTaGGAAAAAGCAATAAAAATG +
Preference number: 2 (lower is better)
Translates to: RGGHSNIHLNTDAERASCVSRGT*EKAIKM
Trigger: CATTTTTATTGCTTTTTCCCACGTCCCACGAGACAC...ACATGAAGCTCTTTCTGCATCAGTATTAAGGTGTATATTTGAATGTCCTCCCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR GCA 90 bp ACTCCTTACCTCGAAAATCTAGAAATTCAAATGCAGACGTGTCTTTGGAAACTATATCAGATTCATGAATaGAAGTGTGTGTGCGCATGT +
Preference number: 2 (lower is better)
Translates to: TPYLENLEIQMQTCLWKLYQIHE*KCVCAC
Trigger: ACATGCGCACACACACTTGCATTCATGAATCTGATA...TAGTTTCCAAAGACACGTCTGCATTTGAATTTCTAGATTTTCGAGGTAAGGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR GCA 72 bp CTGCATGCATGTGGGCGAGCCCCTAAACCCGCTCAGTaGAGGGAGCGCGGCTCACCCACAGCCCACGGGGCG +
Preference number: 3 (lower is better)
Translates to: LHACGRAPKPAQ*RERGSPTAHGA
Trigger: CGCCCCGTGGGCTGTGGGTGAGCCGCGCTCCCTGCACTGAGCGGGTTTAGGGGCTCGCCCACATGCATGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR CCA 72 bp CCCCCGAGGCCTGGGCACACGGGCGTCGTGCCCGGCTaGCATTTGCTGTCTTGGCCTGCATGCATGTGGGCG +
Preference number: 3 (lower is better)
Translates to: PPRPGHTGVVPG*HLLSWPACMWA
Trigger: CGCCCACATGCATGCAGGCCAAGACAGCAAATGCCAGCCGGGCACGACGCCCGTGTGCCCAGGCCTCGGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR GCA 72 bp GGCCTGGGCACACGGGCGTCGTGCCCGGCTGGCATTTaGTGTCTTGGCCTGCATGCATGTGGGCGAGCCCCT +
Preference number: 3 (lower is better)
Translates to: GLGTRASCPAGI*CLGLHACGRAP
Trigger: AGGGGCTCGCCCACATGCATGCAGGCCAAGACAGCAAATGCCAGCCGGGCACGACGCCCGTGTGCCCAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR GCA 72 bp ACAGGAAGCACGCGGCCTTCGGCTCTCCGGATCGTGTaGAAATGTGCAGGGGGAGCCCCCGCGGGTGACGTC +
Preference number: 3 (lower is better)
Translates to: TGSTRPSALRIV*KCAGGAPAGDV
Trigger: GACGTCACCCGCGGGGGCTCCCCCTGCACATTTGCACACGATCCGGAGAGCCGAAGGCCGCGTGCTTCCTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR TCA 72 bp GTGCACCCTGGGCCTCATCAGCGTCCCGGGGTCCCCTaGAAGACTGGCTACAACTCCGACCGGACAACTCGG +
Preference number: 3 (lower is better)
Translates to: VHPGPHQRPGVP*KTGYNSDRTTR
Trigger: CCGAGTTGTCCGGTCGGAGTTGTAGCCAGTCTTTCAGGGGACCCCGGGACGCTGATGAGGCCCAGGGTGCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR GCA 72 bp GGGCGTCGTGCCCGGCTGGCATTTGCTGTCTTGGCCTaGATGCATGTGGGCGAGCCCCTAAACCCGCTCAGT +
Preference number: 3 (lower is better)
Translates to: GRRARLAFAVLA*MHVGEPLNPLS
Trigger: ACTGAGCGGGTTTAGGGGCTCGCCCACATGCATGCAGGCCAAGACAGCAAATGCCAGCCGGGCACGACGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR CCA 72 bp GATGGGTGGCCATCCCAGGCACCGCCCCTGGAGAGGTaGCGGGTCAGAATTGTGACTTCTTCATGCCGGGGA +
Preference number: 3 (lower is better)
Translates to: DGWPSQAPPLER*RVRIVTSSCRG
Trigger: TCCCCGGCATGAAGAAGTCACAATTCTGACCCGCCACCTCTCCAGGGGCGGTGCCTGGGATGGCCACCCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR CAA 90 bp GTGGGCGTCCGTTTTCTCCCGGATGTTCTTGAACCTCAGCGGAAGGAGAGCCGAGGTGAGCTTCTCCTCTaGGGGAGGGCTGAGGAGCCC +
Preference number: 3 (lower is better)
Translates to: VGVRFLPDVLEPQRKESRGELLL*GRAEEP
Trigger: GGGCTCCTCAGCCCTCCCCAAGAGGAGAAGCTCACC...TCGGCTCTCCTTCCGCTGAGGTTCAAGAACATCCGGGAGAAAACGGACGCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571467.1
3UTR CCA 72 bp CCGCGGGTGACGTCAGTGTGGATGAAGTCACGGGTGTaGCAGAGCCTGTGGGGCTCTCAAGCTATTCGAGGG +
Preference number: 3 (lower is better)
Translates to: PRVTSVWMKSRV*QSLWGSQAIRG
Trigger: CCCTCGAATAGCTTGAGAGCCCCACAGGCTCTGCCACACCCGTGACTTCATCCACACTGACGTCACCCGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR CAA 90 bp CTTTGCGGAGCATGTTCTGAGCGAGACAGCAAGGTCGTGAGCAAACGCCCAGCCGTGCCCGGCTGGCATTaGCTGTCTTGGCCTGCATGC +
Preference number: 3 (lower is better)
Translates to: LCGACSERDSKVVSKRPAVPGWH*LSWPAC
Trigger: GCATGCAGGCCAAGACAGCAAATGCCAGCCGGGCAC...GGCTGGGCGTTTGCTCACGACCTTGCTGTCTCGCTCAGAACATGCTCCGCAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR CAA 90 bp GTGGGCGTCCGTTTTCTCCCGGATGTTCTTGAACCTCAGCGGAAGGAGAGCCGAGGTCCTCCAGAAGCCTaGGGTGGATGCGCCAGGAGA +
Preference number: 3 (lower is better)
Translates to: VGVRFLPDVLEPQRKESRGPPEA*GGCARR
Trigger: TCTCCTGGCGCATCCACCCAAGGCTTCTGGAGGACC...TCGGCTCTCCTTCCGCTGAGGTTCAAGAACATCCGGGAGAAAACGGACGCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571467.1
3UTR GCA 72 bp AGCACGACCCATGCCGTCAGCAGCCCTCGTGCCAGCTaGTTAGAAACTCGTGTCTCCAGCACGATGTGCTCG +
Preference number: 3 (lower is better)
Translates to: STTHAVSSPRAS*LETRVSSTMCS
Trigger: CGAGCACATCGTGCTGGAGACACGAGTTTCTAAGCAGCTGGCACGAGGGCTGCTGACGGCATGGGTCGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR CAA 90 bp GCAGCCAACTGCCCGGACGGAGCTCCCCCACACCACCCTCGGGATTCCGCCCCTTTTCAGAGCTGGAATTaGCTCCCCAGATTAAATCCT +
Preference number: 3 (lower is better)
Translates to: AANCPDGAPPHHPRDSAPFQSWN*LPRLNP
Trigger: AGGATTTAATCTGGGGAGCAAATTCCAGCTCTGAAA...AGGGGCGGAATCCCGAGGGTGGTGTGGGGGAGCTCCGTCCGGGCAGTTGGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR CAA 90 bp CTTCTCCTCTTGGGGAGGGCTGAGGAGCCCGTTCTGAGTTTTGGGATTAGGTCCGTCTTGGCAGCCGTTTaGAGGTGCTCCTCCCTCGGC +
Preference number: 3 (lower is better)
Translates to: LLLLGRAEEPVLSFGIRSVLAAV*RCSSLG
Trigger: GCCGAGGGAGGAGCACCTCAAAACGGCTGCCAAGAC...GGACCTAATCCCAAAACTCAGAACGGGCTCCTCAGCCCTCCCCAAGAGGAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571467.1
3UTR TCA 72 bp GCGGAAAGCAAAATGCACAGGGACAACGGGCAAGACTaGCAAGGAGTGCACCCTGGGCCTCATCAGCGTCCC +
Preference number: 3 (lower is better)
Translates to: AESKMHRDNGQD*QGVHPGPHQRP
Trigger: GGGACGCTGATGAGGCCCAGGGTGCACTCCTTGTCAGTCTTGCCCGTTGTCCCTGTGCATTTTGCTTTCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR TCA 72 bp AGGCACCGCCCCTGGAGAGGTGGCGGGTCAGAATTGTaGCTTCTTCATGCCGGGGAGGGCAATCTGTATGTC +
Preference number: 3 (lower is better)
Translates to: RHRPWRGGGSEL*LLHAGEGNLYV
Trigger: GACATACAGATTGCCCTCCCCGGCATGAAGAAGTCACAATTCTGACCCGCCACCTCTCCAGGGGCGGTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR TCA 72 bp CCACAAAGTGGGCGTCCGTTTTCTCCCGGATGTTCTTaGACCTCAGCGGAAGGAGAGCCGACTGGTCCAGGC +
Preference number: 3 (lower is better)
Translates to: PQSGRPFSPGCS*TSAEGEPTGPG
Trigger: GCCTGGACCAGTCGGCTCTCCTTCCGCTGAGGTTCAAGAACATCCGGGAGAAAACGGACGCCCACTTTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571467.1
3UTR GCA 72 bp ATGGCAAAACATAATCAGACAGGACCAGCAGCCAACTaGCCGGACGGAGCTCCCCCACACCACCCTCGGGAT +
Preference number: 3 (lower is better)
Translates to: MAKHNQTGPAAN*PDGAPPHHPRD
Trigger: ATCCCGAGGGTGGTGTGGGGGAGCTCCGTCCGGGCAGTTGGCTGCTGGTCCTGTCTGATTATGTTTTGCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR CAA 90 bp TGCAAATGTGCAGGGGGAGCCCCCGCGGGTGACGTCAGTGTGGATGAAGTCACGGGGAAGGAAATGGGCTaGATGGGGAAGAAGTGTGTG +
Preference number: 3 (lower is better)
Translates to: CKCAGGAPAGDVSVDEVTGKEMG*MGKKCV
Trigger: CACACACTTCTTCCCCATCAAGCCCATTTCCTTCCC...CGTGACTTCATCCACACTGACGTCACCCGCGGGGGCTCCCCCTGCACATTTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR CAA 90 bp CAGGGGGAGCCCCCGCGGGTGACGTCAGTGTGGATGAAGTCACGGGTGTGGCAGTTCAATGCTGAAGTATaGCTTCCTGCCCTAAGTTCC +
Preference number: 3 (lower is better)
Translates to: QGEPPRVTSVWMKSRVWQFNAEV*LPALSS
Trigger: GGAACTTAGGGCAGGAAGCAATACTTCAGCATTGAA...CTGCCACACCCGTGACTTCATCCACACTGACGTCACCCGCGGGGGCTCCCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR GCA 72 bp AGGACCCGAGGGGCTTCGTGGCCCAGAGAGAACGTCTaGACTGGCTGTTTAGGAAGGCTCAGGGTGTTTGAA +
Preference number: 3 (lower is better)
Translates to: RTRGASWPRENV*TGCLGRLRVFE
Trigger: TTCAAACACCCTGAGCCTTCCTAAACAGCCAGTGCAGACGTTCTCTCTGGGCCACGAAGCCCCTCGGGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR TCA 72 bp TTTGCGGAGCATGTTCTGAGCGAGACAGCAAGGTCGTaGGCAAACGCCCAGCCCCTCAAAGCTACACAGCCT +
Preference number: 3 (lower is better)
Translates to: FAEHVLSETARS*ANAQPLKATQP
Trigger: AGGCTGTGTAGCTTTGAGGGGCTGGGCGTTTGCTCACGACCTTGCTGTCTCGCTCAGAACATGCTCCGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR TCA 72 bp AGCTTCTCCTCTTGGGGAGGGCTGAGGAGCCCGTTCTaGGTTTTGGGATTAGGTCCTCCAGAAGCCTTGGGT +
Preference number: 3 (lower is better)
Translates to: SFSSWGGLRSPF*VLGLGPPEALG
Trigger: ACCCAAGGCTTCTGGAGGACCTAATCCCAAAACTCAGAACGGGCTCCTCAGCCCTCCCCAAGAGGAGAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571467.1
3UTR GCA 72 bp CTGGAGAGGTGGCGGGTCAGAATTGTGACTTCTTCATaGCGGGGAGGGCAATCTGTATGTCTCTGGGGAGGA +
Preference number: 3 (lower is better)
Translates to: LERWRVRIVTSS*RGGQSVCLWGG
Trigger: TCCTCCCCAGAGACATACAGATTGCCCTCCCCGGCATGAAGAAGTCACAATTCTGACCCGCCACCTCTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR GCA 72 bp TTCCTAAGAGGTATTGCCACCCTGAAGCACGACCCATaGCGTCAGCAGCCCTCGTGCCAGCTGCTTAGAAAC +
Preference number: 3 (lower is better)
Translates to: FLRGIATLKHDP*RQQPSCQLLRN
Trigger: GTTTCTAAGCAGCTGGCACGAGGGCTGCTGACGGCATGGGTCGTGCTTCAGGGTGGCAATACCTCTTAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR TCA 72 bp AAGAAGTGTGTGCGGAGAACTTTGCGGAGCATGTTCTaGGCGAGACAGCAAGGTCGTGAGCAAACGCCCAGC +
Preference number: 3 (lower is better)
Translates to: KKCVRRTLRSMF*ARQQGREQTPS
Trigger: GCTGGGCGTTTGCTCACGACCTTGCTGTCTCGCTCAGAACATGCTCCGCAAAGTTCTCCGCACACACTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR GCA 72 bp GCCAGCTGCTTAGAAACTCGTGTCTCCAGCACGATGTaGTCGCTGCCAACAGACAAGAGATGCACGGCGTTT +
Preference number: 3 (lower is better)
Translates to: ASCLETRVSSTM*SLPTDKRCTAF
Trigger: AAACGCCGTGCATCTCTTGTCTGTTGGCAGCGAGCACATCGTGCTGGAGACACGAGTTTCTAAGCAGCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR CCA 72 bp TGGGCTTCTCCTATTCCCCTAGCCTCAGAATTGCACTaGCCATGCTTTGAGGTCCCACTCAGACCCCTCTTG +
Preference number: 3 (lower is better)
Translates to: WASPIPLASELH*PCFEVPLRPLL
Trigger: CAAGAGGGGTCTGAGTGGGACCTCAAAGCATGGCCAGTGCAATTCTGAGGCTAGGGGAATAGGAGAAGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR CAA 90 bp GTGGCCAAAACACAAAAGAGACATCTGGTTACCTTCCTGGGAACTGCCCTCCCCGGGCAACTGTGGCGCTaGGAAAGCACAACAGCCAAA +
Preference number: 3 (lower is better)
Translates to: VAKTQKRHLVTFLGTALPGQLWR*ESTTAK
Trigger: TTTGGCTGTTGTGCTTTCCAAGCGCCACAGTTGCCC...GGGGAGGGCAGTTCCCAGGAAGGTAACCAGATGTCTCTTTTGTGTTTTGGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR CAA 90 bp AGCAAGGTCGTGAGCAAACGCCCAGCCCCTCAAAGCTACACAGCCTGGAGGGGAACCTCGGATGTTTATTaGGTATTTCCCTCTCCGATG +
Preference number: 3 (lower is better)
Translates to: SKVVSKRPAPQSYTAWRGTSDVY*VFPSPM
Trigger: CATCGGAGAGGGAAATACCAAATAAACATCCGAGGT...TCCCCTCCAGGCTGTGTAGCTTTGAGGGGCTGGGCGTTTGCTCACGACCTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR TCA 72 bp CCAGACTCCACTTTGCAGCTCCTTGGTTTCCCGGGGTaGGGAATCACAAACACCTTTGTGGTTGGGGAAGGA +
Preference number: 3 (lower is better)
Translates to: PDSTLQLLGFPG*GITNTFVVGEG
Trigger: TCCTTCCCCAACCACAAAGGTGTTTGTGATTCCTCACCCCGGGAAACCAAGGAGCTGCAAAGTGGAGTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR CCA 72 bp GGAGCTGTCGTGACATGCCCCCTTCGCACCCCCTCTTaGCGGATTACTGGCACTTTATATCAGATTCATGAA +
Preference number: 3 (lower is better)
Translates to: GAVVTCPLRTPS*RITGTLYQIHE
Trigger: TTCATGAATCTGATATAAAGTGCCAGTAATCCGCCAAGAGGGGGTGCGAAGGGGGCATGTCACGACAGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR-3UTR CAA 90 bp GAGCCCGTTCTGAGTTTTGGGATTAGGTCCTCCAGAAGCCTTGGGTGGATGCGCACAACAGCCATGAGCTaGTTACCTTGGTGCTGTTTT +
Preference number: 3 (lower is better)
Translates to: EPVLSFGIRSSRSLGWMRTTAMS*LPWCCF
Trigger: AAAACAGCACCAAGGTAACAAGCTCATGGCTGTTGT...GCGCATCCACCCAAGGCTTCTGGAGGACCTAATCCCAAAACTCAGAACGGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571467.1
3UTR TCA 72 bp CAACCTCGGATGTTTATTTGGTATTTCCCTCTCCGATaGGTCAGCTTCCAGGACCAACACCTCCACTCCCGA +
Preference number: 3 (lower is better)
Translates to: QPRMFIWYFPLR*VSFQDQHLHSR
Trigger: TCGGGAGTGGAGGTGTTGGTCCTGGAAGCTGACTCATCGGAGAGGGAAATACCAAATAAACATCCGAGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR CCA 72 bp CATAACACCACGTCCGGGGAGGGCAACTGTGGCGCTTaGAAAGCACAACAGCCAAATACAAATATTACTGTG +
Preference number: 3 (lower is better)
Translates to: HNTTSGEGNCGA*KAQQPNTNITV
Trigger: CACAGTAATATTTGTATTTGGCTGTTGTGCTTTCCAAGCGCCACAGTTGCCCTCCCCGGACGTGGTGTTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR GCA 72 bp CTGACAGGAACAACAGCCATGAGCTTGTTACCTTGGTaGTGTTTTTATGCTCGTCTTGGCAGCCGTTTTGAG +
Preference number: 3 (lower is better)
Translates to: LTGTTAMSLLPW*CFYARLGSRFE
Trigger: CTCAAAACGGCTGCCAAGACGAGCATAAAAACAGCACCAAGGTAACAAGCTCATGGCTGTTGTTCCTGTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571467.1
3UTR CCA 72 bp CAAGAGGTATTGTCACAACCACCCTTTCTTCGGTATTaGAAGACCAGCAAACTGACAGTCACACCTGACAGG +
Preference number: 3 (lower is better)
Translates to: QEVLSQPPFLRY*KTSKLTVTPDR
Trigger: CCTGTCAGGTGTGACTGTCAGTTTGCTGGTCTTCCAATACCGAAGAAAGGGTGGTTGTGACAATACCTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR TCA 72 bp AACCACCCTTTCTTCGGTATTGGAAGACCAGCAAACTaGCAGTCACACCTGACAGGAAACCTTACAGCTAAT +
Preference number: 3 (lower is better)
Translates to: NHPFFGIGRPAN*QSHLTGNLTAN
Trigger: ATTAGCTGTAAGGTTTCCTGTCAGGTGTGACTGTCAGTTTGCTGGTCTTCCAATACCGAAGAAAGGGTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR TCA 72 bp TGCAACTCAAAGCAACTATTTACACACATTCAATGCTaGAGTATTGCTTCCTGCCCTAAGTTCCTAAGAGGT +
Preference number: 3 (lower is better)
Translates to: CNSKQLFTHIQC*SIASCPKFLRG
Trigger: ACCTCTTAGGAACTTAGGGCAGGAAGCAATACTTCAGCATTGAATGTGTGTAAATAGTTGCTTTGAGTTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp CTGCCGGCACAGACCCCCGTGGTTCTGAGCTGGACCCCGGCAGGGAGGAGCCCCGGAGCCGCGCTCCGATaGGTCAAAGGCGGCGCGCGG +
Preference number: 4 (lower is better)
Translates to: LPAQTPVVLSWTPAGRSPGAALR*VKGGAR
Trigger: CCGCGCGCCGCCTTTGACGCATCGGAGCGCGGCTCC...GGGGCTCCTCCCTGCCGGGGTCCAGCTCAGAACCACGGGGGTCTGTGCCGGCAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp GGAGCGCGGCTCACCCACAGCCCACGGGGCGCGGTGCTCGGGAAAGTGCGGGTGCCCCGATGGCGTGGATaGAGCCGTGGAGCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: GARLTHSPRGAVLGKVRVPRWRG*SRGAAP
Trigger: GGGGGCTGCTCCACGGCTGCATCCACGCCATCGGGG...CACCCGCACTTTCCCGAGCACCGCGCCCCGTGGGCTGTGGGTGAGCCGCGCTCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp CTGCCGGCACAGACCCCCGTGGTTCTGAGCTGGACCCCGGCAGGGAGGAGCCCCGCCCACGGGGCGCGGTaGTCGGGAAAGTGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: LPAQTPVVLSWTPAGRSPAHGAR*SGKCGW
Trigger: CCACCCGCACTTTCCCGAGCACCGCGCCCCGTGGGC...GGGGCTCCTCCCTGCCGGGGTCCAGCTCAGAACCACGGGGGTCTGTGCCGGCAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp CTGAGACCCCCGAGGCCTGGGCACACGGGCGTCGTGCCCGGCTGGCATTTGCTGGCAGCAGGGCTGCACTaGAGACCGCCAGGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: LRPPRPGHTGVVPGWHLLAAGLH*RPPGRR
Trigger: CCGCCGCCCTGGCGGTCTTCAGTGCAGCCCTGCTGC...CAGCAAATGCCAGCCGGGCACGACGCCCGTGTGCCCAGGCCTCGGGGGTCTCAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp GGAGCGCGGCTCACCCACAGCCCACGGGGCGCGGTGCTCGGGAAAGTGCGGGTGGCCGTGAGGGGCCCATaGTTGAAGCCGACGCGGAGC +
Preference number: 4 (lower is better)
Translates to: GARLTHSPRGAVLGKVRVAVRGP*LKPTRS
Trigger: GCTCCGCGTCGGCTTCAACCATGGGCCCCTCACGGC...CACCCGCACTTTCCCGAGCACCGCGCCCCGTGGGCTGTGGGTGAGCCGCGCTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp CTGCCGGCACAGACCCCCGTGGTTCTGAGCTGGACCCCGGCAGGGAGGAGCCCCTGGGGCAGCTTCTTCTaGCTGCGCAGCCGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: LPAQTPVVLSWTPAGRSPWGSFF*LRSRPP
Trigger: CGGAGGCCGGCTGCGCAGGCAGAAGAAGCTGCCCCA...GGGGCTCCTCCCTGCCGGGGTCCAGCTCAGAACCACGGGGGTCTGTGCCGGCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp GGAGCGCGGCTCACCCACAGCCCACGGGGCGCGGTGCTCGGGAAAGTGCGGGTGGGAAGGAGAGCCGACTaGTCCAGGCTCACCCCTGCC +
Preference number: 4 (lower is better)
Translates to: GARLTHSPRGAVLGKVRVGRRAD*SRLTPA
Trigger: GGCAGGGGTGAGCCTGGACCAGTCGGCTCTCCTTCC...CACCCGCACTTTCCCGAGCACCGCGCCCCGTGGGCTGTGGGTGAGCCGCGCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp GGAGCGCGGCTCACCCACAGCCCACGGGGCGCGGTGCTCGGGAAAGTGCGGGTGGGCACTCCACGCCGGTaGTGTCCATCCTGCTGGCGA +
Preference number: 4 (lower is better)
Translates to: GARLTHSPRGAVLGKVRVGTPRR*CPSCWR
Trigger: TCGCCAGCAGGATGGACACCACCGGCGTGGAGTGCC...CACCCGCACTTTCCCGAGCACCGCGCCCCGTGGGCTGTGGGTGAGCCGCGCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp GCAGCCAACTGCCCGGACGGAGCTCCCCCACACCACCCTCGGGATTCCGCCCCTGCCCCGCGAGCCGCCTaGGCACAAACAACTCCGCTG +
Preference number: 4 (lower is better)
Translates to: AANCPDGAPPHHPRDSAPAPRAA*AQTTPL
Trigger: CAGCGGAGTTGTTTGTGCGCAGGCGGCTCGCGGGGC...AGGGGCGGAATCCCGAGGGTGGTGTGGGGGAGCTCCGTCCGGGCAGTTGGCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp CTGCCGGCACAGACCCCCGTGGTTCTGAGCTGGACCCCGGCAGGGAGGAGCCCCTCACCGAGTCGAACTTaGGGTCCCACCAGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: LPAQTPVVLSWTPAGRSPSPSRT*GPTSGW
Trigger: CCAGCCGCTGGTGGGACCCCAAGTTCGACTCGGTGA...GGGGCTCCTCCCTGCCGGGGTCCAGCTCAGAACCACGGGGGTCTGTGCCGGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp GCAGCCAACTGCCCGGACGGAGCTCCCCCACACCACCCTCGGGATTCCGCCCCTTGGACCCCGATGGCGTaGATGCAGCCGTGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: AANCPDGAPPHHPRDSAPWTPMA*MQPWSS
Trigger: GCTGCTCCACGGCTGCATCCACGCCATCGGGGTCCA...AGGGGCGGAATCCCGAGGGTGGTGTGGGGGAGCTCCGTCCGGGCAGTTGGCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp CAGGGGGAGCCCCCGCGGGTGACGTCAGTGTGGATGAAGTCACGGGTGTGGCAGAACCGGCGCTGGGTCTaGGGGAAGCAGCGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: QGEPPRVTSVWMKSRVWQNRRWV*GKQRSR
Trigger: CCTGGAGCGCTGCTTCCCGCAGACCCAGCGCCGGTT...CTGCCACACCCGTGACTTCATCCACACTGACGTCACCCGCGGGGGCTCCCCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp GCAGCCAACTGCCCGGACGGAGCTCCCCCACACCACCCTCGGGATTCCGCCCCTTCCTCATGCCCAGGATaGCGCAAAGGACGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: AANCPDGAPPHHPRDSAPSSCPG*RKGRCP
Trigger: CGGGCACCGTCCTTTGCGGCATCCTGGGCATGAGGA...AGGGGCGGAATCCCGAGGGTGGTGTGGGGGAGCTCCGTCCGGGCAGTTGGCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp CTGCCGGCACAGACCCCCGTGGTTCTGAGCTGGACCCCGGCAGGGAGGAGCCCCAGGCCTCTGCACAGCTaGAGCGAGACTCCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: LPAQTPVVLSWTPAGRSPRPLHS*SETPWL
Trigger: GAGCCAAGGAGTCTCGCTGCAGCTGTGCAGAGGCCT...GGGGCTCCTCCCTGCCGGGGTCCAGCTCAGAACCACGGGGGTCTGTGCCGGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp CTGCCGGCACAGACCCCCGTGGTTCTGAGCTGGACCCCGGCAGGGAGGAGCCCCGGAGTAGACGGCCAGTaGGGGAAGCGACACCAGGAT +
Preference number: 4 (lower is better)
Translates to: LPAQTPVVLSWTPAGRSPGVDGQ*GKRHQD
Trigger: ATCCTGGTGTCGCTTCCCGCACTGGCCGTCTACTCC...GGGGCTCCTCCCTGCCGGGGTCCAGCTCAGAACCACGGGGGTCTGTGCCGGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp CAGGGGGAGCCCCCGCGGGTGACGTCAGTGTGGATGAAGTCACGGGTGTGGCAGGGACCAGCAGCCAACTaGCCGGACGGAGCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: QGEPPRVTSVWMKSRVWQGPAAN*PDGAPP
Trigger: TGGGGGAGCTCCGTCCGGGCAGTTGGCTGCTGGTCC...CTGCCACACCCGTGACTTCATCCACACTGACGTCACCCGCGGGGGCTCCCCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp CTGCCGGCACAGACCCCCGTGGTTCTGAGCTGGACCCCGGCAGGGAGGAGCCCCAGACCCACCAGGGCGTaGGCAGACTTGTTGGCACTC +
Preference number: 4 (lower is better)
Translates to: LPAQTPVVLSWTPAGRSPRPTRA*ADLLAL
Trigger: GAGTGCCAACAAGTCTGCCCACGCCCTGGTGGGTCT...GGGGCTCCTCCCTGCCGGGGTCCAGCTCAGAACCACGGGGGTCTGTGCCGGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp TTGGCCTGCATGCATGTGGGCGAGCCCCTAAACCCGCTCAGTGCAGGGAGCGCGGGGTGGCTGCCGTCCTaGGCCTGCGCGGTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: LACMHVGEPLNPLSAGSAGWLPS*ACAVFS
Trigger: GCTGAACACCGCGCAGGCCCAGGACGGCAGCCACCC...CGCGCTCCCTGCACTGAGCGGGTTTAGGGGCTCGCCCACATGCATGCAGGCCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp CGGGCAAGACTGACAAGGAGTGCACCCTGGGCCTCATCAGCGTCCCGGGGTCCCGGCTGTCCTGATGGGTaGCCATCCCAGGCACCGCCC +
Preference number: 4 (lower is better)
Translates to: RARLTRSAPWASSASRGPGCPDG*PSQAPP
Trigger: GGGCGGTGCCTGGGATGGCCACCCATCAGGACAGCC...GGGACCCCGGGACGCTGATGAGGCCCAGGGTGCACTCCTTGTCAGTCTTGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR CAA 72 bp AGGCCTGGGCACACGGGCGTCGTGCCCGGCTGGCATTaGCTGTCTTGGCCTGCATGCATGTGGGCGAGCCCC +
Preference number: 4 (lower is better)
Translates to: RPGHTGVVPGWH*LSWPACMWASP
Trigger: GGGGCTCGCCCACATGCATGCAGGCCAAGACAGCAAATGCCAGCCGGGCACGACGCCCGTGTGCCCAGGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp GGAGCGCGGCTCACCCACAGCCCACGGGGCGCGGTGCTCGGGAAAGTGCGGGTGTCTGGCCTTTCCCCTTaGCATTCACGGTCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: GARLTHSPRGAVLGKVRVSGLSP*HSRSLC
Trigger: ACAGAGGGACCGTGAATGTCAAGGGGAAAGGCCAGA...CACCCGCACTTTCCCGAGCACCGCGCCCCGTGGGCTGTGGGTGAGCCGCGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp TTGGCCTGCATGCATGTGGGCGAGCCCCTAAACCCGCTCAGTGCAGGGAGCGCGGCAGCCGTTTTGAGGTaGTCCTCCCTCGGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: LACMHVGEPLNPLSAGSAAAVLR*SSLGAG
Trigger: GCCGGCGCCGAGGGAGGAGCACCTCAAAACGGCTGC...CGCGCTCCCTGCACTGAGCGGGTTTAGGGGCTCGCCCACATGCATGCAGGCCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp GCAGCCAACTGCCCGGACGGAGCTCCCCCACACCACCCTCGGGATTCCGCCCCTCCCGGTAGCACTCCTTaGCGCCCTCGTAGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: AANCPDGAPPHHPRDSAPPGSTP*RPRSSP
Trigger: AGGAGAACTACGAGGGCGGCAAGGAGTGCTACCGGG...AGGGGCGGAATCCCGAGGGTGGTGTGGGGGAGCTCCGTCCGGGCAGTTGGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp CAGGGGGAGCCCCCGCGGGTGACGTCAGTGTGGATGAAGTCACGGGTGTGGCAGGGCACACGGGCGTCGTaGCCGGCTGGCATTTGCTGT +
Preference number: 4 (lower is better)
Translates to: QGEPPRVTSVWMKSRVWQGTRAS*PAGICC
Trigger: ACAGCAAATGCCAGCCGGGCACGACGCCCGTGTGCC...CTGCCACACCCGTGACTTCATCCACACTGACGTCACCCGCGGGGGCTCCCCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp GCAGCCAACTGCCCGGACGGAGCTCCCCCACACCACCCTCGGGATTCCGCCCCTGAAGCGACACCAGGATaGCCCCGATGCAGTGACGTG +
Preference number: 4 (lower is better)
Translates to: AANCPDGAPPHHPRDSAPEATPG*PRCSDV
Trigger: CACGTCACTGCATCGGGGCCATCCTGGTGTCGCTTC...AGGGGCGGAATCCCGAGGGTGGTGTGGGGGAGCTCCGTCCGGGCAGTTGGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp CTGCCGGCACAGACCCCCGTGGTTCTGAGCTGGACCCCGGCAGGGAGGAGCCCCTGGCAATCTCGTCTGTaGGAGACCGTCCGATGCTGC +
Preference number: 4 (lower is better)
Translates to: LPAQTPVVLSWTPAGRSPWQSRL*ETVRCC
Trigger: GCAGCATCGGACGGTCTCCCACAGACGAGATTGCCA...GGGGCTCCTCCCTGCCGGGGTCCAGCTCAGAACCACGGGGGTCTGTGCCGGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp GCGGCCTCTGTCCCGAGACTCGAGGCCGAGGCCAGCCCTGAAGGCACTTGTTCTGGGAAGTTCAGACCTTaGGCGCTCCCAGCCCCGCGA +
Preference number: 4 (lower is better)
Translates to: AASVPRLEAEASPEGTCSGKFRP*ALPAPR
Trigger: TCGCGGGGCTGGGAGCGCTCAAGGTCTGAACTTCCC...AGAACAAGTGCCTTCAGGGCTGGCCTCGGCCTCGAGTCTCGGGACAGAGGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp CTGCCGGCACAGACCCCCGTGGTTCTGAGCTGGACCCCGGCAGGGAGGAGCCCCCTCCCAGCTGCTCCATaGGATTGGCCAGGTTCACAT +
Preference number: 4 (lower is better)
Translates to: LPAQTPVVLSWTPAGRSPLPAAP*DWPGSH
Trigger: ATGTGAACCTGGCCAATCTCATGGAGCAGCTGGGAG...GGGGCTCCTCCCTGCCGGGGTCCAGCTCAGAACCACGGGGGTCTGTGCCGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp GGAGCGCGGCTCACCCACAGCCCACGGGGCGCGGTGCTCGGGAAAGTGCGGGTGCCTGTGAGCCGTCAATaGCCTCAAAGCCAGAAAGCA +
Preference number: 4 (lower is better)
Translates to: GARLTHSPRGAVLGKVRVPVSRQ*PQSQKA
Trigger: TGCTTTCTGGCTTTGAGGTCATTGACGGCTCACAGG...CACCCGCACTTTCCCGAGCACCGCGCCCCGTGGGCTGTGGGTGAGCCGCGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp TGCCGTCAGCAGCCCTCGTGCCAGCTGCTTAGAAACTCGTGTCTCCAGCACGATCCACCTCCTGGCCGATaGGGCTGGCGGGCCGCCGGA +
Preference number: 4 (lower is better)
Translates to: CRQQPSCQLLRNSCLQHDPPPGR*GWRAAG
Trigger: TCCGGCGGCCCGCCAGCCTCATCGGCCAGGAGGTGG...ATCGTGCTGGAGACACGAGTTTCTAAGCAGCTGGCACGAGGGCTGCTGACGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp GCAGCCAACTGCCCGGACGGAGCTCCCCCACACCACCCTCGGGATTCCGCCCCTTTCTCCACCACGTGCTaGACGGATGACCCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: AANCPDGAPPHHPRDSAPFSTTC*TDDPEA
Trigger: TGCCTCTGGGTCATCCGTTCAGCACGTGGTGGAGAA...AGGGGCGGAATCCCGAGGGTGGTGTGGGGGAGCTCCGTCCGGGCAGTTGGCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp GCGGCCTCTGTCCCGAGACTCGAGGCCGAGGCCAGCCCTGAAGGCACTTGTTCTTGGCTCTGGCTGTCCTaGTGGGTGGCCATCCCAGGC +
Preference number: 4 (lower is better)
Translates to: AASVPRLEAEASPEGTCSWLWLS*WVAIPG
Trigger: GCCTGGGATGGCCACCCATCAGGACAGCCAGAGCCA...AGAACAAGTGCCTTCAGGGCTGGCCTCGGCCTCGAGTCTCGGGACAGAGGCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp CTGCCGGCACAGACCCCCGTGGTTCTGAGCTGGACCCCGGCAGGGAGGAGCCCCTTGCGGAGCATGTTCTaGGCGAGACAGCAAGGTCGT +
Preference number: 4 (lower is better)
Translates to: LPAQTPVVLSWTPAGRSPLRSMF*ARQQGR
Trigger: ACGACCTTGCTGTCTCGCTCAGAACATGCTCCGCAA...GGGGCTCCTCCCTGCCGGGGTCCAGCTCAGAACCACGGGGGTCTGTGCCGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp CTGAGACCCCCGAGGCCTGGGCACACGGGCGTCGTGCCCGGCTGGCATTTGCTGACGTTAAGCTCTGGGTaGGTCTGCACGGGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: LRPPRPGHTGVVPGWHLLTLSSG*VCTGLN
Trigger: GTTCAGCCCCGTGCAGACTCACCCAGAGCTTAACGT...CAGCAAATGCCAGCCGGGCACGACGCCCGTGTGCCCAGGCCTCGGGGGTCTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp TTGGCCTGCATGCATGTGGGCGAGCCCCTAAACCCGCTCAGTGCAGGGAGCGCGCTCGCCTCCTCCAGCTaGGGCTCCGGAGGGAAGTTC +
Preference number: 4 (lower is better)
Translates to: LACMHVGEPLNPLSAGSALASSS*GSGGKF
Trigger: GAACTTCCCTCCGGAGCCGCAGCTGGAGGAGGCGAG...CGCGCTCCCTGCACTGAGCGGGTTTAGGGGCTCGCCCACATGCATGCAGGCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp GCGGCCTCTGTCCCGAGACTCGAGGCCGAGGCCAGCCCTGAAGGCACTTGTTCTCGTGGAGCAGCCCCCTaGTCAGCAGCTCCCAGTGCA +
Preference number: 4 (lower is better)
Translates to: AASVPRLEAEASPEGTCSRGAAP*SAAPSA
Trigger: TGCACTGGGAGCTGCTGAGCAGGGGGCTGCTCCACG...AGAACAAGTGCCTTCAGGGCTGGCCTCGGCCTCGAGTCTCGGGACAGAGGCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp CCAGCACGATGTGCTCGCTGCCAACAGACAAGAGATGCACGGCGTTTCCGCTGCGCCGCGTGGCCGCCGTaGCTCCGGGACCGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: PARCARCQQTRDARRFRCAAWPP*LRDRFA
Trigger: AGCAAAGCGGTCCCGGAGCCACGGCGGCCACGCGGC...GCAGCGGAAACGCCGTGCATCTCTTGTCTGTTGGCAGCGAGCACATCGTGCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp GCAGCCAACTGCCCGGACGGAGCTCCCCCACACCACCCTCGGGATTCCGCCCCTTTGCAGTGCTTGGGGTaGCTGTTGGAGGACAGCTGC +
Preference number: 4 (lower is better)
Translates to: AANCPDGAPPHHPRDSAPLQCLG*LLEDSC
Trigger: GCAGCTGTCCTCCAACAGCCACCCCAAGCACTGCAA...AGGGGCGGAATCCCGAGGGTGGTGTGGGGGAGCTCCGTCCGGGCAGTTGGCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp AGCAAGGTCGTGAGCAAACGCCCAGCCCCTCAAAGCTACACAGCCTGGAGGGGAGAGACCCCCGAGGCCTaGGCACACGGGCGTCGTGCC +
Preference number: 4 (lower is better)
Translates to: SKVVSKRPAPQSYTAWRGETPEA*AHGRRA
Trigger: GGCACGACGCCCGTGTGCCCAGGCCTCGGGGGTCTC...TCCCCTCCAGGCTGTGTAGCTTTGAGGGGCTGGGCGTTTGCTCACGACCTTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR CAA 72 bp GCACACGGGCGTCGTGCCCGGCTGGCATTTGCTGTCTaGGCCTGCATGCATGTGGGCGAGCCCCTAAACCCG +
Preference number: 4 (lower is better)
Translates to: AHGRRARLAFAV*ACMHVGEPLNP
Trigger: CGGGTTTAGGGGCTCGCCCACATGCATGCAGGCCAAGACAGCAAATGCCAGCCGGGCACGACGCCCGTGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp CTTTGCGGAGCATGTTCTGAGCGAGACAGCAAGGTCGTGAGCAAACGCCCAGCCGGTGAGAGGCGGCTCTaGGACCCCCGAGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: LCGACSERDSKVVSKRPAGERRL*DPRGLG
Trigger: GCCCAGGCCTCGGGGGTCTCAGAGCCGCCTCTCACC...GGCTGGGCGTTTGCTCACGACCTTGCTGTCTCGCTCAGAACATGCTCCGCAAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp CTGCCGGCACAGACCCCCGTGGTTCTGAGCTGGACCCCGGCAGGGAGGAGCCCCGGAAGGAAATGGGCTTaGTGGGGAAGAAGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: LPAQTPVVLSWTPAGRSPGRKWA*WGRSVC
Trigger: GCACACACTTCTTCCCCATCAAGCCCATTTCCTTCC...GGGGCTCCTCCCTGCCGGGGTCCAGCTCAGAACCACGGGGGTCTGTGCCGGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp GCAGCCAACTGCCCGGACGGAGCTCCCCCACACCACCCTCGGGATTCCGCCCCTTCTGTGGTTCTGCACTaGGGTATGCATCGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: AANCPDGAPPHHPRDSAPSVVLH*GMHRSR
Trigger: CCTGCTCCGATGCATACCTCAGTGCAGAACCACAGA...AGGGGCGGAATCCCGAGGGTGGTGTGGGGGAGCTCCGTCCGGGCAGTTGGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp GCGGCCTCTGTCCCGAGACTCGAGGCCGAGGCCAGCCCTGAAGGCACTTGTTCTTCATGTCGGAAGAGCTaGCGCCGCCACCATCTCCGG +
Preference number: 4 (lower is better)
Translates to: AASVPRLEAEASPEGTCSSCRKS*RRHHLR
Trigger: CCGGAGATGGTGGCGGCGGCAGCTCTTCCGACATGA...AGAACAAGTGCCTTCAGGGCTGGCCTCGGCCTCGAGTCTCGGGACAGAGGCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp CGTGGGTGGCAGGGGCAGCTGGTGGGCTTCTCCTATTCCCCTAGCCTCAGAATTGCTCCGGGACCGCTTTaGTCGCTCGCCTTCCGCGCC +
Preference number: 4 (lower is better)
Translates to: RGWQGQLVGFSYSPSLRIAPGPL*SLAFRA
Trigger: GGCGCGGAAGGCGAGCGAGCAAAGCGGTCCCGGAGC...AATTCTGAGGCTAGGGGAATAGGAGAAGCCCACCAGCTGCCCCTGCCACCCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp CGGGCAAGACTGACAAGGAGTGCACCCTGGGCCTCATCAGCGTCCCGGGGTCCCGCCCTCTCGAACAGCTaGGGCAGCTTCTTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: RARLTRSAPWASSASRGPALSNS*GSFFCL
Trigger: CAGGCAGAAGAAGCTGCCCCAGCTGTTCGAGAGGGC...GGGACCCCGGGACGCTGATGAGGCCCAGGGTGCACTCCTTGTCAGTCTTGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp TTGGCCTGCATGCATGTGGGCGAGCCCCTAAACCCGCTCAGTGCAGGGAGCGCGACAGGTGGACCCCGATaGCGTGGATGCAGCCGTGGA +
Preference number: 4 (lower is better)
Translates to: LACMHVGEPLNPLSAGSATGGPR*RGCSRG
Trigger: TCCACGGCTGCATCCACGCCATCGGGGTCCACCTGT...CGCGCTCCCTGCACTGAGCGGGTTTAGGGGCTCGCCCACATGCATGCAGGCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp CGAGACAGCAAGGTCGTGAGCAAACGCCCAGCCCCTCAAAGCTACACAGCCTGGAGGTGCTCCTGCGGGTaGCTGCCGTCCTGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: RDSKVVSKRPAPQSYTAWRCSCG*LPSWAC
Trigger: GCAGGCCCAGGACGGCAGCCACCCGCAGGAGCACCT...CCAGGCTGTGTAGCTTTGAGGGGCTGGGCGTTTGCTCACGACCTTGCTGTCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp GCAGCCAACTGCCCGGACGGAGCTCCCCCACACCACCCTCGGGATTCCGCCCCTCAGAAGGCACCAGGTTaGCAATCTCGTCTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: AANCPDGAPPHHPRDSAPQKAPG*QSRLWE
Trigger: CTCCCACAGACGAGATTGCCAACCTGGTGCCTTCTG...AGGGGCGGAATCCCGAGGGTGGTGTGGGGGAGCTCCGTCCGGGCAGTTGGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp TTGGCCTGCATGCATGTGGGCGAGCCCCTAAACCCGCTCAGTGCAGGGAGCGCGGGTGGCAGGGGCAGCTaGTGGGCTTCTCCTATTCCC +
Preference number: 4 (lower is better)
Translates to: LACMHVGEPLNPLSAGSAGGRGS*WASPIP
Trigger: GGGAATAGGAGAAGCCCACCAGCTGCCCCTGCCACC...CGCGCTCCCTGCACTGAGCGGGTTTAGGGGCTCGCCCACATGCATGCAGGCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp CGTGGGTGGCAGGGGCAGCTGGTGGGCTTCTCCTATTCCCCTAGCCTCAGAATTATGGCCCCGATGCAGTaGCGTGGTAGCCAGCCGGCG +
Preference number: 4 (lower is better)
Translates to: RGWQGQLVGFSYSPSLRIMAPMQ*RGSQPA
Trigger: CGCCGGCTGGCTACCACGTCACTGCATCGGGGCCAT...AATTCTGAGGCTAGGGGAATAGGAGAAGCCCACCAGCTGCCCCTGCCACCCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp CGAGACAGCAAGGTCGTGAGCAAACGCCCAGCCCCTCAAAGCTACACAGCCTGGCGCGGTGTTCAGCCCTaGCGCCGCCATGTACGTGGC +
Preference number: 4 (lower is better)
Translates to: RDSKVVSKRPAPQSYTAWRGVQP*RRHVRG
Trigger: GCCACGTACATGGCGGCGTCAGGGCTGAACACCGCG...CCAGGCTGTGTAGCTTTGAGGGGCTGGGCGTTTGCTCACGACCTTGCTGTCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp CCAGCACGATGTGCTCGCTGCCAACAGACAAGAGATGCACGGCGTTTCCGCTGCCGGAGCCCTCCATCCTaGAGGAGCCGCGCTCCGATG +
Preference number: 4 (lower is better)
Translates to: PARCARCQQTRDARRFRCRSPPS*RSRAPM
Trigger: CATCGGAGCGCGGCTCCTGCAGGATGGAGGGCTCCG...GCAGCGGAAACGCCGTGCATCTCTTGTCTGTTGGCAGCGAGCACATCGTGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp GGAGCGCGGCTCACCCACAGCCCACGGGGCGCGGTGCTCGGGAAAGTGCGGGTGAAAAGAGCACTTCGATaGACATGGAGAAGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: GARLTHSPRGAVLGKVRVKRALR*TWRSSP
Trigger: TGGGGAGCTTCTCCATGTGCATCGAAGTGCTCTTTT...CACCCGCACTTTCCCGAGCACCGCGCCCCGTGGGCTGTGGGTGAGCCGCGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp TGCAAATGTGCAGGGGGAGCCCCCGCGGGTGACGTCAGTGTGGATGAAGTCACGCCTAAACCCGCTCAGTaGAGGGAGCGCGGCTCACCC +
Preference number: 4 (lower is better)
Translates to: CKCAGGAPAGDVSVDEVTPKPAQ*RERGSP
Trigger: GGGTGAGCCGCGCTCCCTGCACTGAGCGGGTTTAGG...CGTGACTTCATCCACACTGACGTCACCCGCGGGGGCTCCCCCTGCACATTTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp TCCCTCTCCGATGAGTCAGCTTCCAGGACCAACACCTCCACTCCCGATGGGGAGCCAAGATGGCACCGGTaGTGCCGGCACAGACCCCCG +
Preference number: 4 (lower is better)
Translates to: SLSDESASRTNTSTPDGEPRWHR*CRHRPP
Trigger: CGGGGGTCTGTGCCGGCAGCACCGGTGCCATCTTGG...CTCCCCATCGGGAGTGGAGGTGTTGGTCCTGGAAGCTGACTCATCGGAGAGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp CGAGACAGCAAGGTCGTGAGCAAACGCCCAGCCCCTCAAAGCTACACAGCCTGGTACCGGAACCGGCGCTaGGTCTGCGGGAAGCAGCGC +
Preference number: 4 (lower is better)
Translates to: RDSKVVSKRPAPQSYTAWYRNRR*VCGKQR
Trigger: GCGCTGCTTCCCGCAGACCCAGCGCCGGTTCCGGTA...CCAGGCTGTGTAGCTTTGAGGGGCTGGGCGTTTGCTCACGACCTTGCTGTCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp CTGAGACCCCCGAGGCCTGGGCACACGGGCGTCGTGCCCGGCTGGCATTTGCTGTGCAGCGAGACTCCTTaGCTCTCTGACCCGATATCA +
Preference number: 4 (lower is better)
Translates to: LRPPRPGHTGVVPGWHLLCSETP*LSDPIS
Trigger: TGATATCGGGTCAGAGAGCCAAGGAGTCTCGCTGCA...CAGCAAATGCCAGCCGGGCACGACGCCCGTGTGCCCAGGCCTCGGGGGTCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp CCGGATGTTCTTGAACCTCAGCGGAAGGAGAGCCGACTGGTCCAGGCTCACCCCGGAAGGAGAGCCGACTaGTCCAGGCTCACCCCTGCC +
Preference number: 4 (lower is better)
Translates to: PDVLEPQRKESRLVQAHPGRRAD*SRLTPA
Trigger: GGCAGGGGTGAGCCTGGACCAGTCGGCTCTCCTTCC...GGGGTGAGCCTGGACCAGTCGGCTCTCCTTCCGCTGAGGTTCAAGAACATCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571467.1
CDS-3UTR CCA 90 bp CTGAGACCCCCGAGGCCTGGGCACACGGGCGTCGTGCCCGGCTGGCATTTGCTGTCAGGAAGCAGGTGGTaGACAGCGTCAGAAACACTG +
Preference number: 4 (lower is better)
Translates to: LRPPRPGHTGVVPGWHLLSGSRW*TASETL
Trigger: CAGTGTTTCTGACGCTGTCCACCACCTGCTTCCTGA...CAGCAAATGCCAGCCGGGCACGACGCCCGTGTGCCCAGGCCTCGGGGGTCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp CTGCCGGCACAGACCCCCGTGGTTCTGAGCTGGACCCCGGCAGGGAGGAGCCCCCGAGCCTGTGAACACTaGGAAGTGTATGTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: LPAQTPVVLSWTPAGRSPRACEH*EVYVGL
Trigger: GAGACCAACATACACTTCCCAGTGTTCACAGGCTCG...GGGGCTCCTCCCTGCCGGGGTCCAGCTCAGAACCACGGGGGTCTGTGCCGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp TCATCAGCGTCCCGGGGTCCCCTGAAAGACTGGCTACAACTCCGACCGGACAACCCCGTGGTTCTGAGCTaGACCCCGGCAGGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: SSASRGPLKDWLQLRPDNPVVLS*TPAGRS
Trigger: GCTCCTCCCTGCCGGGGTCCAGCTCAGAACCACGGG...GTTGTCCGGTCGGAGTTGTAGCCAGTCTTTCAGGGGACCCCGGGACGCTGATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp CGTGGGTGGCAGGGGCAGCTGGTGGGCTTCTCCTATTCCCCTAGCCTCAGAATTCGAACACCAGCAGGGTaGGAGCCAGCGAGGTCCACG +
Preference number: 4 (lower is better)
Translates to: RGWQGQLVGFSYSPSLRIRTPAG*EPARST
Trigger: CGTGGACCTCGCTGGCTCTCACCCTGCTGGTGTTCG...AATTCTGAGGCTAGGGGAATAGGAGAAGCCCACCAGCTGCCCCTGCCACCCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp CGAGACAGCAAGGTCGTGAGCAAACGCCCAGCCCCTCAAAGCTACACAGCCTGGGCTGTCGCCGCGTCCTaGGACAGGCGTCAAGACCTG +
Preference number: 4 (lower is better)
Translates to: RDSKVVSKRPAPQSYTAWAVAAS*DRRQDL
Trigger: CAGGTCTTGACGCCTGTCTCAGGACGCGGCGACAGC...CCAGGCTGTGTAGCTTTGAGGGGCTGGGCGTTTGCTCACGACCTTGCTGTCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp GCAGCCAACTGCCCGGACGGAGCTCCCCCACACCACCCTCGGGATTCCGCCCCTTCACACAGAGAAGTCTaGCTGTTGGTGAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: AANCPDGAPPHHPRDSAPSHREV*LLVSFS
Trigger: GGAGAAGCTCACCAACAGTCAGACTTCTCTGTGTGA...AGGGGCGGAATCCCGAGGGTGGTGTGGGGGAGCTCCGTCCGGGCAGTTGGCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp TCCCTCTCCGATGAGTCAGCTTCCAGGACCAACACCTCCACTCCCGATGGGGAGGGCCGAGGCCAGCCCTaGAGGCACTTGTTCTCCACC +
Preference number: 4 (lower is better)
Translates to: SLSDESASRTNTSTPDGEGRGQP*RHLFST
Trigger: GGTGGAGAACAAGTGCCTTCAGGGCTGGCCTCGGCC...CTCCCCATCGGGAGTGGAGGTGTTGGTCCTGGAAGCTGACTCATCGGAGAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp CTTTGCGGAGCATGTTCTGAGCGAGACAGCAAGGTCGTGAGCAAACGCCCAGCCGTGGCGGAGCTGTCGTaGCATGCCCCCTTCGCACCC +
Preference number: 4 (lower is better)
Translates to: LCGACSERDSKVVSKRPAVAELS*HAPFAP
Trigger: GGGTGCGAAGGGGGCATGTCACGACAGCTCCGCCAC...GGCTGGGCGTTTGCTCACGACCTTGCTGTCTCGCTCAGAACATGCTCCGCAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp CGTGGGTGGCAGGGGCAGCTGGTGGGCTTCTCCTATTCCCCTAGCCTCAGAATTTGCCGCAAAGGACGGTaGCCGTGTGCACCCCGACTC +
Preference number: 4 (lower is better)
Translates to: RGWQGQLVGFSYSPSLRICRKGR*PCAPRL
Trigger: GAGTCGGGGTGCACACGGGCACCGTCCTTTGCGGCA...AATTCTGAGGCTAGGGGAATAGGAGAAGCCCACCAGCTGCCCCTGCCACCCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp GTGGGCGTCCGTTTTCTCCCGGATGTTCTTGAACCTCAGCGGAAGGAGAGCCGAGCAGCCGTTTTGAGGTaGTCCTCCCTCGGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: VGVRFLPDVLEPQRKESRAAVLR*SSLGAG
Trigger: GCCGGCGCCGAGGGAGGAGCACCTCAAAACGGCTGC...TCGGCTCTCCTTCCGCTGAGGTTCAAGAACATCCGGGAGAAAACGGACGCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571467.1
CDS-3UTR GCA 90 bp TCATCAGCGTCCCGGGGTCCCCTGAAAGACTGGCTACAACTCCGACCGGACAACCTTCGCTCACCTGGATaGGGCACTCCACGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: SSASRGPLKDWLQLRPDNLRSPG*GTPRRW
Trigger: CCACCGGCGTGGAGTGCCGCATCCAGGTGAGCGAAG...GTTGTCCGGTCGGAGTTGTAGCCAGTCTTTCAGGGGACCCCGGGACGCTGATGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp TCCCTCTCCGATGAGTCAGCTTCCAGGACCAACACCTCCACTCCCGATGGGGAGGGTCCCACCAGCGGCTaGAGGCCCTCTCGAACAGCT +
Preference number: 4 (lower is better)
Translates to: SLSDESASRTNTSTPDGEGPTSG*RPSRTA
Trigger: AGCTGTTCGAGAGGGCCTCCAGCCGCTGGTGGGACC...CTCCCCATCGGGAGTGGAGGTGTTGGTCCTGGAAGCTGACTCATCGGAGAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp TGCCGTCAGCAGCCCTCGTGCCAGCTGCTTAGAAACTCGTGTCTCCAGCACGATGCGGGGGAGGCACGGTaGCCGCCTCGTACTTCAGGA +
Preference number: 4 (lower is better)
Translates to: CRQQPSCQLLRNSCLQHDAGEAR*PPRTSG
Trigger: TCCTGAAGTACGAGGCGGCCACCGTGCCTCCCCCGC...ATCGTGCTGGAGACACGAGTTTCTAAGCAGCTGGCACGAGGGCTGCTGACGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp CTGAGACCCCCGAGGCCTGGGCACACGGGCGTCGTGCCCGGCTGGCATTTGCTGGCTGCAGAGATTCTGTaGTTCTGCACTGAGGTATGC +
Preference number: 4 (lower is better)
Translates to: LRPPRPGHTGVVPGWHLLAAEIL*FCTEVC
Trigger: GCATACCTCAGTGCAGAACCACAGAATCTCTGCAGC...CAGCAAATGCCAGCCGGGCACGACGCCCGTGTGCCCAGGCCTCGGGGGTCTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp TGCACAGGGACAACGGGCAAGACTGACAAGGAGTGCACCCTGGGCCTCATCAGCGCGCGGGGGCGACCATaGCGATCAGTCTGGATCTCA +
Preference number: 4 (lower is better)
Translates to: CTGTTGKTDKECTLGLISARGRP*RSVWIS
Trigger: TGAGATCCAGACTGATCGTCATGGTCGCCCCCGCGC...GCTGATGAGGCCCAGGGTGCACTCCTTGTCAGTCTTGCCCGTTGTCCCTGTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp TGCAAATGTGCAGGGGGAGCCCCCGCGGGTGACGTCAGTGTGGATGAAGTCACGACCTCACCTGGGACATaGCGAACAGGTGGACCCCGA +
Preference number: 4 (lower is better)
Translates to: CKCAGGAPAGDVSVDEVTTSPGT*RTGGPR
Trigger: TCGGGGTCCACCTGTTCGTCATGTCCCAGGTGAGGT...CGTGACTTCATCCACACTGACGTCACCCGCGGGGGCTCCCCCTGCACATTTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp CGGGCAAGACTGACAAGGAGTGCACCCTGGGCCTCATCAGCGTCCCGGGGTCCCGACTCCTTGGCTCTCTaGCCCGATATCAGGTATGTC +
Preference number: 4 (lower is better)
Translates to: RARLTRSAPWASSASRGPDSLAL*PDIRYV
Trigger: GACATACCTGATATCGGGTCAGAGAGCCAAGGAGTC...GGGACCCCGGGACGCTGATGAGGCCCAGGGTGCACTCCTTGTCAGTCTTGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp CGAGACAGCAAGGTCGTGAGCAAACGCCCAGCCCCTCAAAGCTACACAGCCTGGTCTTGGCAGCCGTTTTaGGGTGCTCCTCCCTCGGCG +
Preference number: 4 (lower is better)
Translates to: RDSKVVSKRPAPQSYTAWSWQPF*GAPPSA
Trigger: CGCCGAGGGAGGAGCACCTCAAAACGGCTGCCAAGA...CCAGGCTGTGTAGCTTTGAGGGGCTGGGCGTTTGCTCACGACCTTGCTGTCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp TTGGCCTGCATGCATGTGGGCGAGCCCCTAAACCCGCTCAGTGCAGGGAGCGCGTGGATCTTGGTGCGGTaGAGATCCGCTTCCACGTCT +
Preference number: 4 (lower is better)
Translates to: LACMHVGEPLNPLSAGSAWILVR*RSASTS
Trigger: AGACGTGGAAGCGGATCTTCACCGCACCAAGATCCA...CGCGCTCCCTGCACTGAGCGGGTTTAGGGGCTCGCCCACATGCATGCAGGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp TGCCGTCAGCAGCCCTCGTGCCAGCTGCTTAGAAACTCGTGTCTCCAGCACGATAGGCCCTGTGCCATCTaGGAGCGGGAGGCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: CRQQPSCQLLRNSCLQHDRPCAI*EREAAK
Trigger: CTTGGCTGCCTCCCGCTCTCAGATGGCACAGGGCCT...ATCGTGCTGGAGACACGAGTTTCTAAGCAGCTGGCACGAGGGCTGCTGACGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp GCAGCCAACTGCCCGGACGGAGCTCCCCCACACCACCCTCGGGATTCCGCCCCTACTGACAGTCACACCTaGCAGGAAACCTTACAGCTA +
Preference number: 4 (lower is better)
Translates to: AANCPDGAPPHHPRDSAPTDSHT*QETLQL
Trigger: TAGCTGTAAGGTTTCCTGTCAGGTGTGACTGTCAGT...AGGGGCGGAATCCCGAGGGTGGTGTGGGGGAGCTCCGTCCGGGCAGTTGGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp TGCACAGGGACAACGGGCAAGACTGACAAGGAGTGCACCCTGGGCCTCATCAGCGAGACAGCAAGGTCGTaGGCAAACGCCCAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: CTGTTGKTDKECTLGLISETARS*ANAQPL
Trigger: GAGGGGCTGGGCGTTTGCTCACGACCTTGCTGTCTC...GCTGATGAGGCCCAGGGTGCACTCCTTGTCAGTCTTGCCCGTTGTCCCTGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp GAAGGCTCAGGGTGTTTGAAAGACAACGTTAAGCTCTGGGTGAGTCTGCACGGGCTCAGCAGCTCCCAGTaGAGGGCCCCGGCTCCGGGC +
Preference number: 4 (lower is better)
Translates to: EGSGCLKDNVKLWVSLHGLSSSQ*RAPAPG
Trigger: GCCCGGAGCCGGGGCCCTGCACTGGGAGCTGCTGAG...CCCGTGCAGACTCACCCAGAGCTTAACGTTGTCTTTCAAACACCCTGAGCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp CAGGGGGAGCCCCCGCGGGTGACGTCAGTGTGGATGAAGTCACGGGTGTGGCAGGGGCTCGAGGTGGCATaGCTCTTGACAGAATTCTCA +
Preference number: 4 (lower is better)
Translates to: QGEPPRVTSVWMKSRVWQGLEVA*LLTEFS
Trigger: TGAGAATTCTGTCAAGAGGCATGCCACCTCGAGCCC...CTGCCACACCCGTGACTTCATCCACACTGACGTCACCCGCGGGGGCTCCCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp TGCAAATGTGCAGGGGGAGCCCCCGCGGGTGACGTCAGTGTGGATGAAGTCACGCTGCCTGGTCCCGCATaGTCTGGATCTTGGTGCGGT +
Preference number: 4 (lower is better)
Translates to: CKCAGGAPAGDVSVDEVTLPGPA*SGSWCG
Trigger: ACCGCACCAAGATCCAGAGCATGCGGGACCAGGCAG...CGTGACTTCATCCACACTGACGTCACCCGCGGGGGCTCCCCCTGCACATTTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp TCCCTCTCCGATGAGTCAGCTTCCAGGACCAACACCTCCACTCCCGATGGGGAGTGGGAGACCGTCCGATaGTGCCATCCACCTGGACGC +
Preference number: 4 (lower is better)
Translates to: SLSDESASRTNTSTPDGEWETVR*CHPPGR
Trigger: GCGTCCAGGTGGATGGCAGCATCGGACGGTCTCCCA...CTCCCCATCGGGAGTGGAGGTGTTGGTCCTGGAAGCTGACTCATCGGAGAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp TGCACAGGGACAACGGGCAAGACTGACAAGGAGTGCACCCTGGGCCTCATCAGCGGAGCTGTCGTGACATaGCCCCTTCGCACCCCCTCT +
Preference number: 4 (lower is better)
Translates to: CTGTTGKTDKECTLGLISGAVVT*PLRTPS
Trigger: AGAGGGGGTGCGAAGGGGGCATGTCACGACAGCTCC...GCTGATGAGGCCCAGGGTGCACTCCTTGTCAGTCTTGCCCGTTGTCCCTGTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp TCCCTCTCCGATGAGTCAGCTTCCAGGACCAACACCTCCACTCCCGATGGGGAGCACAAACAACTCCGCTaGCGGCGCGGAGCCCTCCAT +
Preference number: 4 (lower is better)
Translates to: SLSDESASRTNTSTPDGEHKQLR*RRGALH
Trigger: ATGGAGGGCTCCGCGCCGCCAGCGGAGTTGTTTGTG...CTCCCCATCGGGAGTGGAGGTGTTGGTCCTGGAAGCTGACTCATCGGAGAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp CGGGCAAGACTGACAAGGAGTGCACCCTGGGCCTCATCAGCGTCCCGGGGTCCCCCTCTTCCTGATAGCTaGTCCTGTAGGATCGCTCCA +
Preference number: 4 (lower is better)
Translates to: RARLTRSAPWASSASRGPPLPDS*SCRIAP
Trigger: TGGAGCGATCCTACAGGACCAGCTATCAGGAAGAGG...GGGACCCCGGGACGCTGATGAGGCCCAGGGTGCACTCCTTGTCAGTCTTGCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp GACAACGTTAAGCTCTGGGTGAGTCTGCACGGGGCTGAACCAGACTCCACTTTGCGGCCCCCACGACGGTaGCGAGGGAGGACCTCATCC +
Preference number: 4 (lower is better)
Translates to: DNVKLWVSLHGAEPDSTLRPPRR*RGRTSS
Trigger: GGATGAGGTCCTCCCTCGCCACCGTCGTGGGGGCCG...CAAAGTGGAGTCTGGTTCAGCCCCGTGCAGACTCACCCAGAGCTTAACGTTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp GACAACGTTAAGCTCTGGGTGAGTCTGCACGGGGCTGAACCAGACTCCACTTTGACCTCGGGCAGCGGGTaGGCGCCGCCTCACACACTC +
Preference number: 4 (lower is better)
Translates to: DNVKLWVSLHGAEPDSTLTSGSG*APPHTL
Trigger: GAGTGTGTGAGGCGGCGCCCACCCGCTGCCCGAGGT...CAAAGTGGAGTCTGGTTCAGCCCCGTGCAGACTCACCCAGAGCTTAACGTTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp ATGGCAAAACATAATCAGACAGGACCAGCAGCCAACTGCCCGGACGGAGCTCCCAGTGCGGGTGGGCAATaGGGGGTGGCGGAGCTGTCG +
Preference number: 4 (lower is better)
Translates to: MAKHNQTGPAANCPDGAPSAGGQ*GVAELS
Trigger: CGACAGCTCCGCCACCCCCCATTGCCCACCCGCACT...GGGAGCTCCGTCCGGGCAGTTGGCTGCTGGTCCTGTCTGATTATGTTTTGCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp CTGCCGGCACAGACCCCCGTGGTTCTGAGCTGGACCCCGGCAGGGAGGAGCCCCCACAAAAGAGACATCTaGTTACCTTCCTGGGAACTG +
Preference number: 4 (lower is better)
Translates to: LPAQTPVVLSWTPAGRSPHKRDI*LPSWEL
Trigger: CAGTTCCCAGGAAGGTAACCAGATGTCTCTTTTGTG...GGGGCTCCTCCCTGCCGGGGTCCAGCTCAGAACCACGGGGGTCTGTGCCGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp AGCAAGGTCGTGAGCAAACGCCCAGCCCCTCAAAGCTACACAGCCTGGAGGGGAACAAGGAGTGCACCCTaGGCCTCATCAGCGTCCCGG +
Preference number: 4 (lower is better)
Translates to: SKVVSKRPAPQSYTAWRGTRSAP*ASSASR
Trigger: CCGGGACGCTGATGAGGCCCAGGGTGCACTCCTTGT...TCCCCTCCAGGCTGTGTAGCTTTGAGGGGCTGGGCGTTTGCTCACGACCTTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp GCAGCCAACTGCCCGGACGGAGCTCCCCCACACCACCCTCGGGATTCCGCCCCTTCACAAACACCTTTGTaGTTGGGGAAGGAAATGGGC +
Preference number: 4 (lower is better)
Translates to: AANCPDGAPPHHPRDSAPSQTPL*LGKEMG
Trigger: GCCCATTTCCTTCCCCAACCACAAAGGTGTTTGTGA...AGGGGCGGAATCCCGAGGGTGGTGTGGGGGAGCTCCGTCCGGGCAGTTGGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp GCGGCCTCTGTCCCGAGACTCGAGGCCGAGGCCAGCCCTGAAGGCACTTGTTCTGTGTGGCAGAGCCTGTaGGGCTCTCAAGCTATTCGA +
Preference number: 4 (lower is better)
Translates to: AASVPRLEAEASPEGTCSVWQSL*GSQAIR
Trigger: TCGAATAGCTTGAGAGCCCCACAGGCTCTGCCACAC...AGAACAAGTGCCTTCAGGGCTGGCCTCGGCCTCGAGTCTCGGGACAGAGGCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp GCAGCCAACTGCCCGGACGGAGCTCCCCCACACCACCCTCGGGATTCCGCCCCTGAATCATCCTCTCTTTaGGGGCTTTTTCCACTTCCA +
Preference number: 4 (lower is better)
Translates to: AANCPDGAPPHHPRDSAPESSSL*GLFPLP
Trigger: TGGAAGTGGAAAAAGCCCTCAAAGAGAGGATGATTC...AGGGGCGGAATCCCGAGGGTGGTGTGGGGGAGCTCCGTCCGGGCAGTTGGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp GCGGCCTCTGTCCCGAGACTCGAGGCCGAGGCCAGCCCTGAAGGCACTTGTTCTATTTGGGAGCAAATGTaGTTCCGCACGAAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: AASVPRLEAEASPEGTCSIWEQM*FRTKGR
Trigger: CCTGCCCTTCGTGCGGAATCACATTTGCTCCCAAAT...AGAACAAGTGCCTTCAGGGCTGGCCTCGGCCTCGAGTCTCGGGACAGAGGCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp TTGGCCTGCATGCATGTGGGCGAGCCCCTAAACCCGCTCAGTGCAGGGAGCGCGTGGCTCCGATGGTCTTaGTCTTCTCGATGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: LACMHVGEPLNPLSAGSAWLRWS*SSRCCC
Trigger: ACAGCAGCATCGAGAAGATCAAGACCATCGGAGCCA...CGCGCTCCCTGCACTGAGCGGGTTTAGGGGCTCGCCCACATGCATGCAGGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp GGAGCGCGGCTCACCCACAGCCCACGGGGCGCGGTGCTCGGGAAAGTGCGGGTGGATGAAAATGAACCCTaGATAACTGTGATCCACACA +
Preference number: 4 (lower is better)
Translates to: GARLTHSPRGAVLGKVRVDENEP*ITVIHT
Trigger: TGTGTGGATCACAGTTATTCAGGGTTCATTTTCATC...CACCCGCACTTTCCCGAGCACCGCGCCCCGTGGGCTGTGGGTGAGCCGCGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp CAGGGGGAGCCCCCGCGGGTGACGTCAGTGTGGATGAAGTCACGGGTGTGGCAGTATTTCCCTCTCCGATaGGTCAGCTTCCAGGACCAA +
Preference number: 4 (lower is better)
Translates to: QGEPPRVTSVWMKSRVWQYFPLR*VSFQDQ
Trigger: TTGGTCCTGGAAGCTGACTCATCGGAGAGGGAAATA...CTGCCACACCCGTGACTTCATCCACACTGACGTCACCCGCGGGGGCTCCCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp CGTGGGTGGCAGGGGCAGCTGGTGGGCTTCTCCTATTCCCCTAGCCTCAGAATTGCACTGGCCATGCTTTaGGGTCCCACTCAGACCCCT +
Preference number: 4 (lower is better)
Translates to: RGWQGQLVGFSYSPSLRIALAML*GPTQTP
Trigger: AGGGGTCTGAGTGGGACCTCAAAGCATGGCCAGTGC...AATTCTGAGGCTAGGGGAATAGGAGAAGCCCACCAGCTGCCCCTGCCACCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp TGCACAGGGACAACGGGCAAGACTGACAAGGAGTGCACCCTGGGCCTCATCAGCGACAACGGGCAAGACTaGCAAGGAGTGCACCCTGGG +
Preference number: 4 (lower is better)
Translates to: CTGTTGKTDKECTLGLISDNGQD*QGVHPG
Trigger: CCCAGGGTGCACTCCTTGTCAGTCTTGCCCGTTGTC...GCTGATGAGGCCCAGGGTGCACTCCTTGTCAGTCTTGCCCGTTGTCCCTGTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp GCAGCCAACTGCCCGGACGGAGCTCCCCCACACCACCCTCGGGATTCCGCCCCTAAGGCTCAGGGTGTTTaGAAGACAACGTTAAGCTCT +
Preference number: 4 (lower is better)
Translates to: AANCPDGAPPHHPRDSAPKAQGV*KTTLSS
Trigger: AGAGCTTAACGTTGTCTTTCAAACACCCTGAGCCTT...AGGGGCGGAATCCCGAGGGTGGTGTGGGGGAGCTCCGTCCGGGCAGTTGGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp CTGAGACCCCCGAGGCCTGGGCACACGGGCGTCGTGCCCGGCTGGCATTTGCTGACTTCTTCGATCTGCTaGATCTTAAAAGGGCGGAAG +
Preference number: 4 (lower is better)
Translates to: LRPPRPGHTGVVPGWHLLTSSIC*ILKGRK
Trigger: CTTCCGCCCTTTTAAGATGCAGCAGATCGAAGAAGT...CAGCAAATGCCAGCCGGGCACGACGCCCGTGTGCCCAGGCCTCGGGGGTCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp GCAGCCAACTGCCCGGACGGAGCTCCCCCACACCACCCTCGGGATTCCGCCCCTTTGGTGCTGTTTTTATaGTCGTCTTGGCAGCCGTTT +
Preference number: 4 (lower is better)
Translates to: AANCPDGAPPHHPRDSAPLVLFL*SSWQPF
Trigger: AAACGGCTGCCAAGACGAGCATAAAAACAGCACCAA...AGGGGCGGAATCCCGAGGGTGGTGTGGGGGAGCTCCGTCCGGGCAGTTGGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp CGGGCAAGACTGACAAGGAGTGCACCCTGGGCCTCATCAGCGTCCCGGGGTCCCTGCTGTAGTCCGGCTTaGTTAGGAGCTCGTCAAAGT +
Preference number: 4 (lower is better)
Translates to: RARLTRSAPWASSASRGPCCSPA*LGARQS
Trigger: ACTTTGACGAGCTCCTAAGCAAGCCGGACTACAGCA...GGGACCCCGGGACGCTGATGAGGCCCAGGGTGCACTCCTTGTCAGTCTTGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp GACAACGTTAAGCTCTGGGTGAGTCTGCACGGGGCTGAACCAGACTCCACTTTGCTGCCGTCCTGGGCCTaGGCGGTGTTCAGCCCTGAC +
Preference number: 4 (lower is better)
Translates to: DNVKLWVSLHGAEPDSTLLPSWA*AVFSPD
Trigger: GTCAGGGCTGAACACCGCGCAGGCCCAGGACGGCAG...CAAAGTGGAGTCTGGTTCAGCCCCGTGCAGACTCACCCAGAGCTTAACGTTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp CTTTGCGGAGCATGTTCTGAGCGAGACAGCAAGGTCGTGAGCAAACGCCCAGCCGAGACCGTCCGATGCTaGCATCCACCTGGACGCGGA +
Preference number: 4 (lower is better)
Translates to: LCGACSERDSKVVSKRPAETVRC*HPPGRG
Trigger: TCCGCGTCCAGGTGGATGGCAGCATCGGACGGTCTC...GGCTGGGCGTTTGCTCACGACCTTGCTGTCTCGCTCAGAACATGCTCCGCAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp ATGGCAAAACATAATCAGACAGGACCAGCAGCCAACTGCCCGGACGGAGCTCCCGATCGTGTGCAAATGTaGAGGGGGAGCCCCCGCGGG +
Preference number: 4 (lower is better)
Translates to: MAKHNQTGPAANCPDGAPDRVQM*RGSPRG
Trigger: CCCGCGGGGGCTCCCCCTGCACATTTGCACACGATC...GGGAGCTCCGTCCGGGCAGTTGGCTGCTGGTCCTGTCTGATTATGTTTTGCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp TGCCGTCAGCAGCCCTCGTGCCAGCTGCTTAGAAACTCGTGTCTCCAGCACGATTGTTGCTGTCCCCGCTaGAGTCGCAGCTCACCTCGG +
Preference number: 4 (lower is better)
Translates to: CRQQPSCQLLRNSCLQHDCCCPR*SRSSPR
Trigger: CCGAGGTGAGCTGCGACTCCAGCGGGGACAGCAACA...ATCGTGCTGGAGACACGAGTTTCTAAGCAGCTGGCACGAGGGCTGCTGACGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp CGGGCAAGACTGACAAGGAGTGCACCCTGGGCCTCATCAGCGTCCCGGGGTCCCACTTCAGGAAGCAGGTaGTGGACAGCGTCAGAAACA +
Preference number: 4 (lower is better)
Translates to: RARLTRSAPWASSASRGPTSGSR*WTASET
Trigger: TGTTTCTGACGCTGTCCACCACCTGCTTCCTGAAGT...GGGACCCCGGGACGCTGATGAGGCCCAGGGTGCACTCCTTGTCAGTCTTGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp TGCAAATGTGCAGGGGGAGCCCCCGCGGGTGACGTCAGTGTGGATGAAGTCACGGGACAGCTGGTGCTGTaGGATGACCCTGTGATCCGT +
Preference number: 4 (lower is better)
Translates to: CKCAGGAPAGDVSVDEVTGQLVL*DDPVIR
Trigger: ACGGATCACAGGGTCATCCCACAGCACCAGCTGTCC...CGTGACTTCATCCACACTGACGTCACCCGCGGGGGCTCCCCCTGCACATTTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp CGTGGGTGGCAGGGGCAGCTGGTGGGCTTCTCCTATTCCCCTAGCCTCAGAATTGGGGAGATGGACAGCTaGTGCTGTGGGATGACCCTG +
Preference number: 4 (lower is better)
Translates to: RGWQGQLVGFSYSPSLRIGEMDS*CCGMTL
Trigger: CAGGGTCATCCCACAGCACCAGCTGTCCATCTCCCC...AATTCTGAGGCTAGGGGAATAGGAGAAGCCCACCAGCTGCCCCTGCCACCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp CCAGCACGATGTGCTCGCTGCCAACAGACAAGAGATGCACGGCGTTTCCGCTGCCTGGACGCGGATGTCTaGGGAGATGGACAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: PARCARCQQTRDARRFRCLDADV*GDGQLV
Trigger: CACCAGCTGTCCATCTCCCCAGACATCCGCGTCCAG...GCAGCGGAAACGCCGTGCATCTCTTGTCTGTTGGCAGCGAGCACATCGTGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp TCCCTCTCCGATGAGTCAGCTTCCAGGACCAACACCTCCACTCCCGATGGGGAGACAGGTGGGCATCCTTaGCCTGCGTGCTGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: SLSDESASRTNTSTPDGETGGHP*PACCCQ
Trigger: CTGACAGCAGCACGCAGGCCAAGGATGCCCACCTGT...CTCCCCATCGGGAGTGGAGGTGTTGGTCCTGGAAGCTGACTCATCGGAGAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp TGCACAGGGACAACGGGCAAGACTGACAAGGAGTGCACCCTGGGCCTCATCAGCCCTTCCACGGTCTCTTaGGGGACAGGTGGGCATCCT +
Preference number: 4 (lower is better)
Translates to: CTGTTGKTDKECTLGLISPSTVS*GTGGHP
Trigger: AGGATGCCCACCTGTCCCCCAAGAGACCGTGGAAGG...GCTGATGAGGCCCAGGGTGCACTCCTTGTCAGTCTTGCCCGTTGTCCCTGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp TGCACAGGGACAACGGGCAAGACTGACAAGGAGTGCACCCTGGGCCTCATCAGCAGCCATGATCTCCACTaGCGGCCTCTGTCCCGAGAC +
Preference number: 4 (lower is better)
Translates to: CTGTTGKTDKECTLGLISSHDLH*RPLSRD
Trigger: GTCTCGGGACAGAGGCCGCCAGTGGAGATCATGGCT...GCTGATGAGGCCCAGGGTGCACTCCTTGTCAGTCTTGCCCGTTGTCCCTGTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp TTGGCCTGCATGCATGTGGGCGAGCCCCTAAACCCGCTCAGTGCAGGGAGCGCGCTTCGCACCCCCTCTTaGCGGATTACTGGCACTTTA +
Preference number: 4 (lower is better)
Translates to: LACMHVGEPLNPLSAGSALRTPS*RITGTL
Trigger: TAAAGTGCCAGTAATCCGCCAAGAGGGGGTGCGAAG...CGCGCTCCCTGCACTGAGCGGGTTTAGGGGCTCGCCCACATGCATGCAGGCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp CTTTGCGGAGCATGTTCTGAGCGAGACAGCAAGGTCGTGAGCAAACGCCCAGCCGGCGTCGTGCCCGGCTaGCATTTGCTGTCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: LCGACSERDSKVVSKRPAGVVPG*HLLSWP
Trigger: AGGCCAAGACAGCAAATGCCAGCCGGGCACGACGCC...GGCTGGGCGTTTGCTCACGACCTTGCTGTCTCGCTCAGAACATGCTCCGCAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp TCATCAGCGTCCCGGGGTCCCCTGAAAGACTGGCTACAACTCCGACCGGACAACCCGCCCCTGGAGAGGTaGCGGGTCAGAATTGTGACT +
Preference number: 4 (lower is better)
Translates to: SSASRGPLKDWLQLRPDNPPLER*RVRIVT
Trigger: AGTCACAATTCTGACCCGCCACCTCTCCAGGGGCGG...GTTGTCCGGTCGGAGTTGTAGCCAGTCTTTCAGGGGACCCCGGGACGCTGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp CTGAGACCCCCGAGGCCTGGGCACACGGGCGTCGTGCCCGGCTGGCATTTGCTGAAGTTCAGGCTGAACTaGTTAATGGGCGGCTTAAAA +
Preference number: 4 (lower is better)
Translates to: LRPPRPGHTGVVPGWHLLKFRLN*LMGGLK
Trigger: TTTTAAGCCGCCCATTAATCAGTTCAGCCTGAACTT...CAGCAAATGCCAGCCGGGCACGACGCCCGTGTGCCCAGGCCTCGGGGGTCTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp TGCACAGGGACAACGGGCAAGACTGACAAGGAGTGCACCCTGGGCCTCATCAGCTCCTGCTGGCGATGTTaGCGGTGTCTCCCCAGATGT +
Preference number: 4 (lower is better)
Translates to: CTGTTGKTDKECTLGLISSCWRC*RCLPRC
Trigger: ACATCTGGGGAGACACCGTCAACATCGCCAGCAGGA...GCTGATGAGGCCCAGGGTGCACTCCTTGTCAGTCTTGCCCGTTGTCCCTGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp GTGGCCAAAACACAAAAGAGACATCTGGTTACCTTCCTGGGAACTGCCCTCCCCAGACCCCCGTGGTTCTaGGCTGGACCCCGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: VAKTQKRHLVTFLGTALPRPPWF*AGPRQG
Trigger: TCCCTGCCGGGGTCCAGCTCAGAACCACGGGGGTCT...GGGGAGGGCAGTTCCCAGGAAGGTAACCAGATGTCTCTTTTGTGTTTTGGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp ATGGCAAAACATAATCAGACAGGACCAGCAGCCAACTGCCCGGACGGAGCTCCCCGTCCCGGGGTCCCCTaGAAGACTGGCTACAACTCC +
Preference number: 4 (lower is better)
Translates to: MAKHNQTGPAANCPDGAPRPGVP*KTGYNS
Trigger: GGAGTTGTAGCCAGTCTTTCAGGGGACCCCGGGACG...GGGAGCTCCGTCCGGGCAGTTGGCTGCTGGTCCTGTCTGATTATGTTTTGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp CTTTGCGGAGCATGTTCTGAGCGAGACAGCAAGGTCGTGAGCAAACGCCCAGCCCGCAGCTCACCTCGGTaGTGTGGTGATGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LCGACSERDSKVVSKRPARSSPR*CGDAAA
Trigger: AGCTGCTGCATCACCACAGCACCGAGGTGAGCTGCG...GGCTGGGCGTTTGCTCACGACCTTGCTGTCTCGCTCAGAACATGCTCCGCAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp GCGGCCTCTGTCCCGAGACTCGAGGCCGAGGCCAGCCCTGAAGGCACTTGTTCTATGCTGTATTTGCAGTaGTTGGGGTGGCTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: AASVPRLEAEASPEGTCSMLYLQ*LGWLLE
Trigger: CTCCAACAGCCACCCCAAGCACTGCAAATACAGCAT...AGAACAAGTGCCTTCAGGGCTGGCCTCGGCCTCGAGTCTCGGGACAGAGGCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp TTGGCCTGCATGCATGTGGGCGAGCCCCTAAACCCGCTCAGTGCAGGGAGCGCGTTCTCCTGGCAGAACTaGTCGATGGCCTTGATCATG +
Preference number: 4 (lower is better)
Translates to: LACMHVGEPLNPLSAGSAFSWQN*SMALIM
Trigger: CATGATCAAGGCCATCGAGCAGTTCTGCCAGGAGAA...CGCGCTCCCTGCACTGAGCGGGTTTAGGGGCTCGCCCACATGCATGCAGGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp TTGGGGAGGGCTGAGGAGCCCGTTCTGAGTTTTGGGATTAGGTCCTCCAGAAGCCCGGCCACTCCCAGCTaGTCCATGAGATTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LGRAEEPVLSFGIRSSRSPATPS*SMRLAR
Trigger: CCTGGCCAATCTCATGGAGCAGCTGGGAGTGGCCGG...GCTTCTGGAGGACCTAATCCCAAAACTCAGAACGGGCTCCTCAGCCCTCCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571467.1
CDS-3UTR GCA 90 bp AGCAAGGTCGTGAGCAAACGCCCAGCCCCTCAAAGCTACACAGCCTGGAGGGGACATCCTTGGCCTGCGTaGTGCTGTCAGAACCCAGAG +
Preference number: 4 (lower is better)
Translates to: SKVVSKRPAPQSYTAWRGHPWPA*CCQNPE
Trigger: CTCTGGGTTCTGACAGCAGCACGCAGGCCAAGGATG...TCCCCTCCAGGCTGTGTAGCTTTGAGGGGCTGGGCGTTTGCTCACGACCTTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp TCCCTCTCCGATGAGTCAGCTTCCAGGACCAACACCTCCACTCCCGATGGGGAGTGCCCGGCTGGCATTTaGTGTCTTGGCCTGCATGCA +
Preference number: 4 (lower is better)
Translates to: SLSDESASRTNTSTPDGECPAGI*CLGLHA
Trigger: TGCATGCAGGCCAAGACAGCAAATGCCAGCCGGGCA...CTCCCCATCGGGAGTGGAGGTGTTGGTCCTGGAAGCTGACTCATCGGAGAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp TGCAAATGTGCAGGGGGAGCCCCCGCGGGTGACGTCAGTGTGGATGAAGTCACGAGCCCTCGTGCCAGCTaGTTAGAAACTCGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: CKCAGGAPAGDVSVDEVTSPRAS*LETRVS
Trigger: GGAGACACGAGTTTCTAAGCAGCTGGCACGAGGGCT...CGTGACTTCATCCACACTGACGTCACCCGCGGGGGCTCCCCCTGCACATTTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp CTTTGCGGAGCATGTTCTGAGCGAGACAGCAAGGTCGTGAGCAAACGCCCAGCCCAGCTGCTGGTGGGGTaGGGAAGCCATGTTGTCGAG +
Preference number: 4 (lower is better)
Translates to: LCGACSERDSKVVSKRPAQLLVG*GSHVVE
Trigger: CTCGACAACATGGCTTCCCCACCCCACCAGCAGCTG...GGCTGGGCGTTTGCTCACGACCTTGCTGTCTCGCTCAGAACATGCTCCGCAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp CTTTGCGGAGCATGTTCTGAGCGAGACAGCAAGGTCGTGAGCAAACGCCCAGCCACAGGCGTCAAGACCTaGAACTGCGCAGCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: LCGACSERDSKVVSKRPATGVKT*NCAARV
Trigger: GACCCTGGCTGCGCAGTTCCAGGTCTTGACGCCTGT...GGCTGGGCGTTTGCTCACGACCTTGCTGTCTCGCTCAGAACATGCTCCGCAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp TGCCGTCAGCAGCCCTCGTGCCAGCTGCTTAGAAACTCGTGTCTCCAGCACGATAGCAGCCAGTCTGCCTaGTCCCGCATGCTCTGGATC +
Preference number: 4 (lower is better)
Translates to: CRQQPSCQLLRNSCLQHDSSQSA*SRMLWI
Trigger: GATCCAGAGCATGCGGGACCAGGCAGACTGGCTGCT...ATCGTGCTGGAGACACGAGTTTCTAAGCAGCTGGCACGAGGGCTGCTGACGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp TGCCGTCAGCAGCCCTCGTGCCAGCTGCTTAGAAACTCGTGTCTCCAGCACGATATGCTGCCATCCACCTaGACGCGGATGTCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: CRQQPSCQLLRNSCLQHDMLPST*TRMSGE
Trigger: CTCCCCAGACATCCGCGTCCAGGTGGATGGCAGCAT...ATCGTGCTGGAGACACGAGTTTCTAAGCAGCTGGCACGAGGGCTGCTGACGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp GACAACGTTAAGCTCTGGGTGAGTCTGCACGGGGCTGAACCAGACTCCACTTTGCACCTCCACTCCCGATaGGGAGACCCCTGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: DNVKLWVSLHGAEPDSTLHLHSR*GDPWVE
Trigger: CTCCACCCAGGGGTCTCCCCATCGGGAGTGGAGGTG...CAAAGTGGAGTCTGGTTCAGCCCCGTGCAGACTCACCCAGAGCTTAACGTTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp CTTTGCGGAGCATGTTCTGAGCGAGACAGCAAGGTCGTGAGCAAACGCCCAGCCTTGTGGAAGCCAAGATaGCACCGGTGCTGCCGGCAC +
Preference number: 4 (lower is better)
Translates to: LCGACSERDSKVVSKRPALWKPR*HRCCRH
Trigger: GTGCCGGCAGCACCGGTGCCATCTTGGCTTCCACAA...GGCTGGGCGTTTGCTCACGACCTTGCTGTCTCGCTCAGAACATGCTCCGCAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp GTGGCCAAAACACAAAAGAGACATCTGGTTACCTTCCTGGGAACTGCCCTCCCCCCCAGGCACCGCCCCTaGAGAGGTGGCGGGTCAGAA +
Preference number: 4 (lower is better)
Translates to: VAKTQKRHLVTFLGTALPPRHRP*RGGGSE
Trigger: TTCTGACCCGCCACCTCTCCAGGGGCGGTGCCTGGG...GGGGAGGGCAGTTCCCAGGAAGGTAACCAGATGTCTCTTTTGTGTTTTGGCCAC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp TGCAAATGTGCAGGGGGAGCCCCCGCGGGTGACGTCAGTGTGGATGAAGTCACGGACAACGTTAAGCTCTaGGTGAGTCTGCACGGGGCT +
Preference number: 4 (lower is better)
Translates to: CKCAGGAPAGDVSVDEVTDNVKL*VSLHGA
Trigger: AGCCCCGTGCAGACTCACCCAGAGCTTAACGTTGTC...CGTGACTTCATCCACACTGACGTCACCCGCGGGGGCTCCCCCTGCACATTTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp TTGGCCTGCATGCATGTGGGCGAGCCCCTAAACCCGCTCAGTGCAGGGAGCGCGAGAGAACGTCTGCACTaGCTGTTTAGGAAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: LACMHVGEPLNPLSAGSARERLH*LFRKAQ
Trigger: CTGAGCCTTCCTAAACAGCCAGTGCAGACGTTCTCT...CGCGCTCCCTGCACTGAGCGGGTTTAGGGGCTCGCCCACATGCATGCAGGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp CCAGCACGATGTGCTCGCTGCCAACAGACAAGAGATGCACGGCGTTTCCGCTGCCGGGTGACGTCAGTGTaGATGAAGTCACGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: PARCARCQQTRDARRFRCRVTSV*MKSRVW
Trigger: CCACACCCGTGACTTCATCCACACTGACGTCACCCG...GCAGCGGAAACGCCGTGCATCTCTTGTCTGTTGGCAGCGAGCACATCGTGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp TTGGCCTGCATGCATGTGGGCGAGCCCCTAAACCCGCTCAGTGCAGGGAGCGCGGAGAAGCTCCCCACTTaGGATAAGCAAGTATCTGTG +
Preference number: 4 (lower is better)
Translates to: LACMHVGEPLNPLSAGSAEKLPT*DKQVSV
Trigger: CACAGATACTTGCTTATCTCAAGTGGGGAGCTTCTC...CGCGCTCCCTGCACTGAGCGGGTTTAGGGGCTCGCCCACATGCATGCAGGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp TTGGCCTGCATGCATGTGGGCGAGCCCCTAAACCCGCTCAGTGCAGGGAGCGCGAAGTTAGGGCTGAAATaGCCACATAACACCACGTCC +
Preference number: 4 (lower is better)
Translates to: LACMHVGEPLNPLSAGSAKLGLK*PHNTTS
Trigger: GGACGTGGTGTTATGTGGTCATTTCAGCCCTAACTT...CGCGCTCCCTGCACTGAGCGGGTTTAGGGGCTCGCCCACATGCATGCAGGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp GCGGCCTCTGTCCCGAGACTCGAGGCCGAGGCCAGCCCTGAAGGCACTTGTTCTAGAAAGAGCTTCATGTaGCCACAATCCCCACGAACA +
Preference number: 4 (lower is better)
Translates to: AASVPRLEAEASPEGTCSRKSFM*PQSPRT
Trigger: TGTTCGTGGGGATTGTGGTCACATGAAGCTCTTTCT...AGAACAAGTGCCTTCAGGGCTGGCCTCGGCCTCGAGTCTCGGGACAGAGGCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp GACAACGTTAAGCTCTGGGTGAGTCTGCACGGGGCTGAACCAGACTCCACTTTGCCGGCCACTCCCAGCTaGTCCATGAGATTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: DNVKLWVSLHGAEPDSTLPATPS*SMRLAR
Trigger: CCTGGCCAATCTCATGGAGCAGCTGGGAGTGGCCGG...CAAAGTGGAGTCTGGTTCAGCCCCGTGCAGACTCACCCAGAGCTTAACGTTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp CTTTGCGGAGCATGTTCTGAGCGAGACAGCAAGGTCGTGAGCAAACGCCCAGCCCCTTGGCCTGCGTGCTaGTGTCAGAACCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: LCGACSERDSKVVSKRPAPWPAC*CQNPEM
Trigger: CATCTCTGGGTTCTGACAGCAGCACGCAGGCCAAGG...GGCTGGGCGTTTGCTCACGACCTTGCTGTCTCGCTCAGAACATGCTCCGCAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp CGTGGGTGGCAGGGGCAGCTGGTGGGCTTCTCCTATTCCCCTAGCCTCAGAATTCCAACAGACAAGAGATaGACGGCGTTTCCGCTGCAG +
Preference number: 4 (lower is better)
Translates to: RGWQGQLVGFSYSPSLRIPTDKR*TAFPLQ
Trigger: CTGCAGCGGAAACGCCGTGCATCTCTTGTCTGTTGG...AATTCTGAGGCTAGGGGAATAGGAGAAGCCCACCAGCTGCCCCTGCCACCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp CCAGCACGATGTGCTCGCTGCCAACAGACAAGAGATGCACGGCGTTTCCGCTGCGTCTCCAGCACGATGTaGTCGCTGCCAACAGACAAG +
Preference number: 4 (lower is better)
Translates to: PARCARCQQTRDARRFRCVSSTM*SLPTDK
Trigger: CTTGTCTGTTGGCAGCGAGCACATCGTGCTGGAGAC...GCAGCGGAAACGCCGTGCATCTCTTGTCTGTTGGCAGCGAGCACATCGTGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp CTGAGACCCCCGAGGCCTGGGCACACGGGCGTCGTGCCCGGCTGGCATTTGCTGCTAAGTATTTTGCGGTaGCCTCAGAAATGTGAACTT +
Preference number: 4 (lower is better)
Translates to: LRPPRPGHTGVVPGWHLLLSILR*PQKCEL
Trigger: AAGTTCACATTTCTGAGGCCACCGCAAAATACTTAG...CAGCAAATGCCAGCCGGGCACGACGCCCGTGTGCCCAGGCCTCGGGGGTCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp TTGGCCTGCATGCATGTGGGCGAGCCCCTAAACCCGCTCAGTGCAGGGAGCGCGTTCAAACCTTTCAACTaGTCAGCAACCACGCTCTGG +
Preference number: 4 (lower is better)
Translates to: LACMHVGEPLNPLSAGSAFKPFN*SATTLW
Trigger: CCAGAGCGTGGTTGCTGACCAGTTGAAAGGTTTGAA...CGCGCTCCCTGCACTGAGCGGGTTTAGGGGCTCGCCCACATGCATGCAGGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp GTGGCCAAAACACAAAAGAGACATCTGGTTACCTTCCTGGGAACTGCCCTCCCCACGAGAACCACCTCCTaGCCGATGAGGCTGGCGGGC +
Preference number: 4 (lower is better)
Translates to: VAKTQKRHLVTFLGTALPTRTTS*PMRLAG
Trigger: GCCCGCCAGCCTCATCGGCCAGGAGGTGGTTCTCGT...GGGGAGGGCAGTTCCCAGGAAGGTAACCAGATGTCTCTTTTGTGTTTTGGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp TGCAAATGTGCAGGGGGAGCCCCCGCGGGTGACGTCAGTGTGGATGAAGTCACGCGCTGTCATGGTTCTTaGAGTAGGTCTGGGACACCT +
Preference number: 4 (lower is better)
Translates to: CKCAGGAPAGDVSVDEVTRCHGS*SRSGTP
Trigger: AGGTGTCCCAGACCTACTCCAAGAACCATGACAGCG...CGTGACTTCATCCACACTGACGTCACCCGCGGGGGCTCCCCCTGCACATTTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp TGCACAGGGACAACGGGCAAGACTGACAAGGAGTGCACCCTGGGCCTCATCAGCTGGCATTTGCTGTCTTaGCCTGCATGCATGTGGGCG +
Preference number: 4 (lower is better)
Translates to: CTGTTGKTDKECTLGLISWHLLS*PACMWA
Trigger: CGCCCACATGCATGCAGGCCAAGACAGCAAATGCCA...GCTGATGAGGCCCAGGGTGCACTCCTTGTCAGTCTTGCCCGTTGTCCCTGTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp CGAGACAGCAAGGTCGTGAGCAAACGCCCAGCCCCTCAAAGCTACACAGCCTGGATCTGGTTACCTTCCTaGGAACTGCCCTCCCCTGTG +
Preference number: 4 (lower is better)
Translates to: RDSKVVSKRPAPQSYTAWIWLPS*ELPSPV
Trigger: CACAGGGGAGGGCAGTTCCCAGGAAGGTAACCAGAT...CCAGGCTGTGTAGCTTTGAGGGGCTGGGCGTTTGCTCACGACCTTGCTGTCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp GCGGCCTCTGTCCCGAGACTCGAGGCCGAGGCCAGCCCTGAAGGCACTTGTTCTAACTTCTGGAATTTGTaGAAGCCAAGATGGCACCGG +
Preference number: 4 (lower is better)
Translates to: AASVPRLEAEASPEGTCSNFWNL*KPRWHR
Trigger: CCGGTGCCATCTTGGCTTCCACAAATTCCAGAAGTT...AGAACAAGTGCCTTCAGGGCTGGCCTCGGCCTCGAGTCTCGGGACAGAGGCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp TGCCGTCAGCAGCCCTCGTGCCAGCTGCTTAGAAACTCGTGTCTCCAGCACGATATGAAGTCACGGGTGTaGCAGAGCCTGTGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: CRQQPSCQLLRNSCLQHDMKSRV*QSLWGS
Trigger: AGAGCCCCACAGGCTCTGCCACACCCGTGACTTCAT...ATCGTGCTGGAGACACGAGTTTCTAAGCAGCTGGCACGAGGGCTGCTGACGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp CGGGCAAGACTGACAAGGAGTGCACCCTGGGCCTCATCAGCGTCCCGGGGTCCCTTAAGTCATCGGCTATaGTTCTTGGCATCACGGAAT +
Preference number: 4 (lower is better)
Translates to: RARLTRSAPWASSASRGPLSHRL*FLASRN
Trigger: ATTCCGTGATGCCAAGAATCATAGCCGATGACTTAA...GGGACCCCGGGACGCTGATGAGGCCCAGGGTGCACTCCTTGTCAGTCTTGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp TGCAAATGTGCAGGGGGAGCCCCCGCGGGTGACGTCAGTGTGGATGAAGTCACGTGGCACTCATCTTGGTaGAGCCCACGATATCTGCAA +
Preference number: 4 (lower is better)
Translates to: CKCAGGAPAGDVSVDEVTWHSSW*SPRYLQ
Trigger: TTGCAGATATCGTGGGCTTCACCAAGATGAGTGCCA...CGTGACTTCATCCACACTGACGTCACCCGCGGGGGCTCCCCCTGCACATTTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp GTCCTCCAGAAGCCTTGGGTGGATGCGCCAGGAGAGGAACTGACAGGAACAACAGTGGCCTCAGAAATGTaGACTTTGCCGGCCACTCCC +
Preference number: 4 (lower is better)
Translates to: VLQKPWVDAPGEELTGTTVASEM*TLPATP
Trigger: GGGAGTGGCCGGCAAAGTTCACATTTCTGAGGCCAC...TGTTGTTCCTGTCAGTTCCTCTCCTGGCGCATCCACCCAAGGCTTCTGGAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571467.1
CDS-3UTR TCA 90 bp TCCCTCTCCGATGAGTCAGCTTCCAGGACCAACACCTCCACTCCCGATGGGGAGAAGTCTGACTGTTGGTaGGCTTCTCCTCTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: SLSDESASRTNTSTPDGEKSDCW*ASPLGE
Trigger: CTCCCCAAGAGGAGAAGCTCACCAACAGTCAGACTT...CTCCCCATCGGGAGTGGAGGTGTTGGTCCTGGAAGCTGACTCATCGGAGAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp AGCAAGGTCGTGAGCAAACGCCCAGCCCCTCAAAGCTACACAGCCTGGAGGGGATCTCATATTCGGAGGTaGCATGGGAGTAGACGGCCA +
Preference number: 4 (lower is better)
Translates to: SKVVSKRPAPQSYTAWRGSHIRR*HGSRRP
Trigger: TGGCCGTCTACTCCCATGTCACCTCCGAATATGAGA...TCCCCTCCAGGCTGTGTAGCTTTGAGGGGCTGGGCGTTTGCTCACGACCTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp TGCACAGGGACAACGGGCAAGACTGACAAGGAGTGCACCCTGGGCCTCATCAGCACCTCATCCAGGAGCTaGGCTGGCAGAAGTTACAGT +
Preference number: 4 (lower is better)
Translates to: CTGTTGKTDKECTLGLISTSSRS*AGRSYS
Trigger: ACTGTAACTTCTGCCAGCTCAGCTCCTGGATGAGGT...GCTGATGAGGCCCAGGGTGCACTCCTTGTCAGTCTTGCCCGTTGTCCCTGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp TGCCGTCAGCAGCCCTCGTGCCAGCTGCTTAGAAACTCGTGTCTCCAGCACGATTGTGGGATGACCCTGTaGTCCGTGCACTTTGGGTAC +
Preference number: 4 (lower is better)
Translates to: CRQQPSCQLLRNSCLQHDCGMTL*SVHFGY
Trigger: GTACCCAAAGTGCACGGATCACAGGGTCATCCCACA...ATCGTGCTGGAGACACGAGTTTCTAAGCAGCTGGCACGAGGGCTGCTGACGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp TCATCAGCGTCCCGGGGTCCCCTGAAAGACTGGCTACAACTCCGACCGGACAACCTGTTGGAGGACAGCTaGTTGGGGTTGATCTTGACG +
Preference number: 4 (lower is better)
Translates to: SSASRGPLKDWLQLRPDNLLEDS*LGLILT
Trigger: CGTCAAGATCAACCCCAAGCAGCTGTCCTCCAACAG...GTTGTCCGGTCGGAGTTGTAGCCAGTCTTTCAGGGGACCCCGGGACGCTGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp CCAGCACGATGTGCTCGCTGCCAACAGACAAGAGATGCACGGCGTTTCCGCTGCCAGAAATGTGAACTTTaGCGGCCACTCCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: PARCARCQQTRDARRFRCQKCEL*RPLPAA
Trigger: AGCAGCTGGGAGTGGCCGGCAAAGTTCACATTTCTG...GCAGCGGAAACGCCGTGCATCTCTTGTCTGTTGGCAGCGAGCACATCGTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp GTGGCCAAAACACAAAAGAGACATCTGGTTACCTTCCTGGGAACTGCCCTCCCCCCTCAGCAGCCAGTCTaGCTGGTCCCGCATGCTCTG +
Preference number: 4 (lower is better)
Translates to: VAKTQKRHLVTFLGTALPPQQPV*LVPHAL
Trigger: CAGAGCATGCGGGACCAGGCAGACTGGCTGCTGAGG...GGGGAGGGCAGTTCCCAGGAAGGTAACCAGATGTCTCTTTTGTGTTTTGGCCAC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp ATGGCAAAACATAATCAGACAGGACCAGCAGCCAACTGCCCGGACGGAGCTCCCTTTGCTGTCTTGGCCTaGATGCATGTGGGCGAGCCC +
Preference number: 4 (lower is better)
Translates to: MAKHNQTGPAANCPDGAPFAVLA*MHVGEP
Trigger: GGGCTCGCCCACATGCATGCAGGCCAAGACAGCAAA...GGGAGCTCCGTCCGGGCAGTTGGCTGCTGGTCCTGTCTGATTATGTTTTGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp TCATCAGCGTCCCGGGGTCCCCTGAAAGACTGGCTACAACTCCGACCGGACAACCAGCGGAAAGCAAAATaGACAGGGACAACGGGCAAG +
Preference number: 4 (lower is better)
Translates to: SSASRGPLKDWLQLRPDNQRKAK*TGTTGK
Trigger: CTTGCCCGTTGTCCCTGTGCATTTTGCTTTCCGCTG...GTTGTCCGGTCGGAGTTGTAGCCAGTCTTTCAGGGGACCCCGGGACGCTGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp CGAGACAGCAAGGTCGTGAGCAAACGCCCAGCCCCTCAAAGCTACACAGCCTGGAACCAGACTCCACTTTaGAGCTCCTTGGTTTCCCGG +
Preference number: 4 (lower is better)
Translates to: RDSKVVSKRPAPQSYTAWNQTPL*SSLVSR
Trigger: CCGGGAAACCAAGGAGCTGCAAAGTGGAGTCTGGTT...CCAGGCTGTGTAGCTTTGAGGGGCTGGGCGTTTGCTCACGACCTTGCTGTCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp TCCCTCTCCGATGAGTCAGCTTCCAGGACCAACACCTCCACTCCCGATGGGGAGCCCAGAGAGAACGTCTaGACTGGCTGTTTAGGAAGG +
Preference number: 4 (lower is better)
Translates to: SLSDESASRTNTSTPDGEPRENV*TGCLGR
Trigger: CCTTCCTAAACAGCCAGTGCAGACGTTCTCTCTGGG...CTCCCCATCGGGAGTGGAGGTGTTGGTCCTGGAAGCTGACTCATCGGAGAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp TCCCTCTCCGATGAGTCAGCTTCCAGGACCAACACCTCCACTCCCGATGGGGAGGTTCCTAAGAGGTATTaGCACCCTGAAGCACGACCC +
Preference number: 4 (lower is better)
Translates to: SLSDESASRTNTSTPDGEVPKRY*HPEARP
Trigger: GGGTCGTGCTTCAGGGTGGCAATACCTCTTAGGAAC...CTCCCCATCGGGAGTGGAGGTGTTGGTCCTGGAAGCTGACTCATCGGAGAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp CCAGCACGATGTGCTCGCTGCCAACAGACAAGAGATGCACGGCGTTTCCGCTGCGCACTTCGATGCACATaGAGAAGCTCCCCACTTGAG +
Preference number: 4 (lower is better)
Translates to: PARCARCQQTRDARRFRCALRCT*RSSPLE
Trigger: CTCAAGTGGGGAGCTTCTCCATGTGCATCGAAGTGC...GCAGCGGAAACGCCGTGCATCTCTTGTCTGTTGGCAGCGAGCACATCGTGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp CCAGCACGATGTGCTCGCTGCCAACAGACAAGAGATGCACGGCGTTTCCGCTGCTTTTCTTCCTGTTCTTaGGGCTCGAGGTGGCATGCC +
Preference number: 4 (lower is better)
Translates to: PARCARCQQTRDARRFRCFSSCS*GSRWHA
Trigger: GGCATGCCACCTCGAGCCCCAAGAACAGGAAGAAAA...GCAGCGGAAACGCCGTGCATCTCTTGTCTGTTGGCAGCGAGCACATCGTGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp CTGAGACCCCCGAGGCCTGGGCACACGGGCGTCGTGCCCGGCTGGCATTTGCTGGCTATAGGAGCTTTTTaGATGGAAGACTTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: LRPPRPGHTGVVPGWHLLAIGAF*MEDFFF
Trigger: GAAGAAAAAGTCTTCCATCCAAAAAGCTCCTATAGC...CAGCAAATGCCAGCCGGGCACGACGCCCGTGTGCCCAGGCCTCGGGGGTCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp TCCCTCTCCGATGAGTCAGCTTCCAGGACCAACACCTCCACTCCCGATGGGGAGTCAGCAACCACGCTCTaGCCCAGCCGTTCAATAACT +
Preference number: 4 (lower is better)
Translates to: SLSDESASRTNTSTPDGESATTL*PSRSIT
Trigger: AGTTATTGAACGGCTGGGCCAGAGCGTGGTTGCTGA...CTCCCCATCGGGAGTGGAGGTGTTGGTCCTGGAAGCTGACTCATCGGAGAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp TCATCAGCGTCCCGGGGTCCCCTGAAAGACTGGCTACAACTCCGACCGGACAACATAACGTCCACAAAGTaGGCGTCCGTTTTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: SSASRGPLKDWLQLRPDNITSTK*ASVFSR
Trigger: CCGGGAGAAAACGGACGCCCACTTTGTGGACGTTAT...GTTGTCCGGTCGGAGTTGTAGCCAGTCTTTCAGGGGACCCCGGGACGCTGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp GTGGCCAAAACACAAAAGAGACATCTGGTTACCTTCCTGGGAACTGCCCTCCCCCTCTCTTCGCTCACCTaGATGCGGCACTCCACGCCG +
Preference number: 4 (lower is better)
Translates to: VAKTQKRHLVTFLGTALPLSSLT*MRHSTP
Trigger: CGGCGTGGAGTGCCGCATCCAGGTGAGCGAAGAGAG...GGGGAGGGCAGTTCCCAGGAAGGTAACCAGATGTCTCTTTTGTGTTTTGGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp TCATCAGCGTCCCGGGGTCCCCTGAAAGACTGGCTACAACTCCGACCGGACAACGCCTCAGAATTGCACTaGCCATGCTTTGAGGTCCCA +
Preference number: 4 (lower is better)
Translates to: SSASRGPLKDWLQLRPDNASELH*PCFEVP
Trigger: TGGGACCTCAAAGCATGGCCAGTGCAATTCTGAGGC...GTTGTCCGGTCGGAGTTGTAGCCAGTCTTTCAGGGGACCCCGGGACGCTGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp TTGGGGAGGGCTGAGGAGCCCGTTCTGAGTTTTGGGATTAGGTCCTCCAGAAGCTCCAGAAGCCTTGGGTaGATGCGCCAGGAGAGGAAC +
Preference number: 4 (lower is better)
Translates to: LGRAEEPVLSFGIRSSRSSRSLG*MRQERN
Trigger: GTTCCTCTCCTGGCGCATCCACCCAAGGCTTCTGGA...GCTTCTGGAGGACCTAATCCCAAAACTCAGAACGGGCTCCTCAGCCCTCCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571467.1
3UTR CAA 72 bp TCCACAAAGTGGGCGTCCGTTTTCTCCCGGATGTTCTaGAACCTCAGCGGAAGGAGAGCCGACTGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: STKWASVFSRMF*NLSGRRADWSR
Trigger: CCTGGACCAGTCGGCTCTCCTTCCGCTGAGGTTCAAGAACATCCGGGAGAAAACGGACGCCCACTTTGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571467.1
CDS-3UTR TCA 90 bp TCCCTCTCCGATGAGTCAGCTTCCAGGACCAACACCTCCACTCCCGATGGGGAGAGGTGGCATGCCTCTTaGCAGAATTCTCACTCTCCT +
Preference number: 4 (lower is better)
Translates to: SLSDESASRTNTSTPDGERWHAS*QNSHSP
Trigger: AGGAGAGTGAGAATTCTGTCAAGAGGCATGCCACCT...CTCCCCATCGGGAGTGGAGGTGTTGGTCCTGGAAGCTGACTCATCGGAGAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp CTTTGCGGAGCATGTTCTGAGCGAGACAGCAAGGTCGTGAGCAAACGCCCAGCCCGGGGGAGTTCTTTATaGCCTCTTCCTGATAGCTGG +
Preference number: 4 (lower is better)
Translates to: LCGACSERDSKVVSKRPARGSSL*PLPDSW
Trigger: CCAGCTATCAGGAAGAGGTCATAAAGAACTCCCCCG...GGCTGGGCGTTTGCTCACGACCTTGCTGTCTCGCTCAGAACATGCTCCGCAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp GACAACGTTAAGCTCTGGGTGAGTCTGCACGGGGCTGAACCAGACTCCACTTTGCCACGTGGTAGGGGATaGTGTTCCTCAGCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: DNVKLWVSLHGAEPDSTLPRGRG*CSSAAS
Trigger: ACTGGCTGCTGAGGAACATCATCCCCTACCACGTGG...CAAAGTGGAGTCTGGTTCAGCCCCGTGCAGACTCACCCAGAGCTTAACGTTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp TTGGCCTGCATGCATGTGGGCGAGCCCCTAAACCCGCTCAGTGCAGGGAGCGCGCGAGGGTTTTGTAACTaGTGCTCTACATTTGTTTGC +
Preference number: 4 (lower is better)
Translates to: LACMHVGEPLNPLSAGSARGFCN*CSTFVC
Trigger: GCAAACAAATGTAGAGCATCAGTTACAAAACCCTCG...CGCGCTCCCTGCACTGAGCGGGTTTAGGGGCTCGCCCACATGCATGCAGGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp CTTTGCGGAGCATGTTCTGAGCGAGACAGCAAGGTCGTGAGCAAACGCCCAGCCGGACCGCAAAATAGATaGTCCACAGAAGGCAGGCGA +
Preference number: 4 (lower is better)
Translates to: LCGACSERDSKVVSKRPAGPQNR*STEGRR
Trigger: TCGCCTGCCTTCTGTGGAGCATCTATTTTGCGGTCC...GGCTGGGCGTTTGCTCACGACCTTGCTGTCTCGCTCAGAACATGCTCCGCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp CTTTGCGGAGCATGTTCTGAGCGAGACAGCAAGGTCGTGAGCAAACGCCCAGCCCCGTGCATAATGGATTaGCCCACCTTGAGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: LCGACSERDSKVVSKRPAPCIMD*PTLRKV
Trigger: CACCTTCCTCAAGGTGGGGCAATCCATTATGCACGG...GGCTGGGCGTTTGCTCACGACCTTGCTGTCTCGCTCAGAACATGCTCCGCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp CTTTGCGGAGCATGTTCTGAGCGAGACAGCAAGGTCGTGAGCAAACGCCCAGCCTGCTCTGGATCTTGGTaGGGTGAAGATCCGCTTCCA +
Preference number: 4 (lower is better)
Translates to: LCGACSERDSKVVSKRPACSGSW*GEDPLP
Trigger: TGGAAGCGGATCTTCACCGCACCAAGATCCAGAGCA...GGCTGGGCGTTTGCTCACGACCTTGCTGTCTCGCTCAGAACATGCTCCGCAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp CGTGGGTGGCAGGGGCAGCTGGTGGGCTTCTCCTATTCCCCTAGCCTCAGAATTAGTCATAGCCCATCTTaGTCAAGACGCGGTAGCTCT +
Preference number: 4 (lower is better)
Translates to: RGWQGQLVGFSYSPSLRISHSPS*SRRGSS
Trigger: AGAGCTACCGCGTCTTGAGCAAGATGGGCTATGACT...AATTCTGAGGCTAGGGGAATAGGAGAAGCCCACCAGCTGCCCCTGCCACCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp TCATCAGCGTCCCGGGGTCCCCTGAAAGACTGGCTACAACTCCGACCGGACAACGAATTGCACTGGCCATaGTTTGAGGTCCCACTCAGA +
Preference number: 4 (lower is better)
Translates to: SSASRGPLKDWLQLRPDNELHWP*FEVPLR
Trigger: TCTGAGTGGGACCTCAAAGCATGGCCAGTGCAATTC...GTTGTCCGGTCGGAGTTGTAGCCAGTCTTTCAGGGGACCCCGGGACGCTGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp GACAACGTTAAGCTCTGGGTGAGTCTGCACGGGGCTGAACCAGACTCCACTTTGTTCTGCACTGAGGTATaGATCGGAGCAGGGGACGGG +
Preference number: 4 (lower is better)
Translates to: DNVKLWVSLHGAEPDSTLFCTEV*IGAGDG
Trigger: CCCGTCCCCTGCTCCGATGCATACCTCAGTGCAGAA...CAAAGTGGAGTCTGGTTCAGCCCCGTGCAGACTCACCCAGAGCTTAACGTTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp CTTTGCGGAGCATGTTCTGAGCGAGACAGCAAGGTCGTGAGCAAACGCCCAGCCGCATGCTCTGGATCTTaGTGCGGTGAAGATCCGCTT +
Preference number: 4 (lower is better)
Translates to: LCGACSERDSKVVSKRPAACSGS*CGEDPL
Trigger: AAGCGGATCTTCACCGCACCAAGATCCAGAGCATGC...GGCTGGGCGTTTGCTCACGACCTTGCTGTCTCGCTCAGAACATGCTCCGCAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp TGCAAATGTGCAGGGGGAGCCCCCGCGGGTGACGTCAGTGTGGATGAAGTCACGGTGATCCGTGCACTTTaGGTACAGGTAGGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: CKCAGGAPAGDVSVDEVTVIRAL*VQVGLH
Trigger: ATGAAGACCTACCTGTACCCAAAGTGCACGGATCAC...CGTGACTTCATCCACACTGACGTCACCCGCGGGGGCTCCCCCTGCACATTTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp GCGGCCTCTGTCCCGAGACTCGAGGCCGAGGCCAGCCCTGAAGGCACTTGTTCTGAAAATAGTGTCTCGTaGGACGTGGGAAAAAGCAAT +
Preference number: 4 (lower is better)
Translates to: AASVPRLEAEASPEGTCSENSVS*DVGKSN
Trigger: ATTGCTTTTTCCCACGTCCCACGAGACACTATTTTC...AGAACAAGTGCCTTCAGGGCTGGCCTCGGCCTCGAGTCTCGGGACAGAGGCCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp GACAACGTTAAGCTCTGGGTGAGTCTGCACGGGGCTGAACCAGACTCCACTTTGGGTCCCCTGAAAGACTaGCTACAACTCCGACCGGAC +
Preference number: 4 (lower is better)
Translates to: DNVKLWVSLHGAEPDSTLGPLKD*LQLRPD
Trigger: GTCCGGTCGGAGTTGTAGCCAGTCTTTCAGGGGACC...CAAAGTGGAGTCTGGTTCAGCCCCGTGCAGACTCACCCAGAGCTTAACGTTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp TGCCGTCAGCAGCCCTCGTGCCAGCTGCTTAGAAACTCGTGTCTCCAGCACGATCACTTTGCAGCTCCTTaGTTTCCCGGGGTGAGGAAT +
Preference number: 4 (lower is better)
Translates to: CRQQPSCQLLRNSCLQHDHFAAP*FPGVRN
Trigger: ATTCCTCACCCCGGGAAACCAAGGAGCTGCAAAGTG...ATCGTGCTGGAGACACGAGTTTCTAAGCAGCTGGCACGAGGGCTGCTGACGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp TCCGTTTTCTCCCGGATGTTCTTGAACCTCAGCGGAAGGAGAGCCGACTGGTCCGGCAGGTCTTTCAACTaGTCAGCAACCACGCTCTGG +
Preference number: 4 (lower is better)
Translates to: SVFSRMFLNLSGRRADWSGRSFN*SATTLW
Trigger: CCAGAGCGTGGTTGCTGACCAGTTGAAAGACCTGCC...GGACCAGTCGGCTCTCCTTCCGCTGAGGTTCAAGAACATCCGGGAGAAAACGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571467.1
3UTR CAA 72 bp AGCTGGTGGGCTTCTCCTATTCCCCTAGCCTCAGAATaGCACTGGCCATGCTTTGAGGTCCCACTCAGACCC +
Preference number: 4 (lower is better)
Translates to: SWWASPIPLASE*HWPCFEVPLRP
Trigger: GGGTCTGAGTGGGACCTCAAAGCATGGCCAGTGCAATTCTGAGGCTAGGGGAATAGGAGAAGCCCACCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp CTTTGCGGAGCATGTTCTGAGCGAGACAGCAAGGTCGTGAGCAAACGCCCAGCCAGTCTCCCAGGGTGCTaGTTTTCTCACACTTGGTCT +
Preference number: 4 (lower is better)
Translates to: LCGACSERDSKVVSKRPASLPGC*FSHTWS
Trigger: AGACCAAGTGTGAGAAAATCAGCACCCTGGGAGACT...GGCTGGGCGTTTGCTCACGACCTTGCTGTCTCGCTCAGAACATGCTCCGCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp GAGCCCGTTCTGAGTTTTGGGATTAGGTCCTCCAGAAGCCTTGGGTGGATGCGCCTGAGGAGCCCGTTCTaGGTTTTGGGATTAGGTCCT +
Preference number: 4 (lower is better)
Translates to: EPVLSFGIRSSRSLGWMRLRSPF*VLGLGP
Trigger: AGGACCTAATCCCAAAACTCAGAACGGGCTCCTCAG...GCGCATCCACCCAAGGCTTCTGGAGGACCTAATCCCAAAACTCAGAACGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571467.1
CDS-3UTR TCA 90 bp GTGGGCGTCCGTTTTCTCCCGGATGTTCTTGAACCTCAGCGGAAGGAGAGCCGATCACACAGAGAAGTCTaGCTGTTGGTGAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: VGVRFLPDVLEPQRKESRSHREV*LLVSFS
Trigger: GGAGAAGCTCACCAACAGTCAGACTTCTCTGTGTGA...TCGGCTCTCCTTCCGCTGAGGTTCAAGAACATCCGGGAGAAAACGGACGCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571467.1
CDS-3UTR TCA 90 bp ATGGCAAAACATAATCAGACAGGACCAGCAGCCAACTGCCCGGACGGAGCTCCCACAGCATGTTGTTGTTaGAGTCGTCCACCACGCGCA +
Preference number: 4 (lower is better)
Translates to: MAKHNQTGPAANCPDGAPTACCC*SRPPRA
Trigger: TGCGCGTGGTGGACGACTTCAACAACAACATGCTGT...GGGAGCTCCGTCCGGGCAGTTGGCTGCTGGTCCTGTCTGATTATGTTTTGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp GAAGGCTCAGGGTGTTTGAAAGACAACGTTAAGCTCTGGGTGAGTCTGCACGGGGGCGGGTCAGAATTGTaGCTTCTTCATGCCGGGGAG +
Preference number: 4 (lower is better)
Translates to: EGSGCLKDNVKLWVSLHGGGSEL*LLHAGE
Trigger: CTCCCCGGCATGAAGAAGTCACAATTCTGACCCGCC...CCCGTGCAGACTCACCCAGAGCTTAACGTTGTCTTTCAAACACCCTGAGCCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp ATGGCAAAACATAATCAGACAGGACCAGCAGCCAACTGCCCGGACGGAGCTCCCGGAAGACCAGCAAACTaGCAGTCACACCTGACAGGA +
Preference number: 4 (lower is better)
Translates to: MAKHNQTGPAANCPDGAPGRPAN*QSHLTG
Trigger: TCCTGTCAGGTGTGACTGTCAGTTTGCTGGTCTTCC...GGGAGCTCCGTCCGGGCAGTTGGCTGCTGGTCCTGTCTGATTATGTTTTGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp CGAGACAGCAAGGTCGTGAGCAAACGCCCAGCCCCTCAAAGCTACACAGCCTGGATTGTGACTTCTTCATaGCGGGGAGGGCAATCTGTA +
Preference number: 4 (lower is better)
Translates to: RDSKVVSKRPAPQSYTAWIVTSS*RGGQSV
Trigger: TACAGATTGCCCTCCCCGGCATGAAGAAGTCACAAT...CCAGGCTGTGTAGCTTTGAGGGGCTGGGCGTTTGCTCACGACCTTGCTGTCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp ATGGCAAAACATAATCAGACAGGACCAGCAGCCAACTGCCCGGACGGAGCTCCCGTGTGCGGAGAACTTTaGGGAGCATGTTCTGAGCGA +
Preference number: 4 (lower is better)
Translates to: MAKHNQTGPAANCPDGAPVCGEL*GACSER
Trigger: TCGCTCAGAACATGCTCCGCAAAGTTCTCCGCACAC...GGGAGCTCCGTCCGGGCAGTTGGCTGCTGGTCCTGTCTGATTATGTTTTGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp GAAGGCTCAGGGTGTTTGAAAGACAACGTTAAGCTCTGGGTGAGTCTGCACGGGGACATGACGAACAGGTaGACCCCGATGGCGTGGATG +
Preference number: 4 (lower is better)
Translates to: EGSGCLKDNVKLWVSLHGDMTNR*TPMAWM
Trigger: CATCCACGCCATCGGGGTCCACCTGTTCGTCATGTC...CCCGTGCAGACTCACCCAGAGCTTAACGTTGTCTTTCAAACACCCTGAGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp GAAGGCTCAGGGTGTTTGAAAGACAACGTTAAGCTCTGGGTGAGTCTGCACGGGCTCCTGGACCTCACCTaGGACATGACGAACAGGTGG +
Preference number: 4 (lower is better)
Translates to: EGSGCLKDNVKLWVSLHGLLDLT*DMTNRW
Trigger: CCACCTGTTCGTCATGTCCCAGGTGAGGTCCAGGAG...CCCGTGCAGACTCACCCAGAGCTTAACGTTGTCTTTCAAACACCCTGAGCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp TCATCAGCGTCCCGGGGTCCCCTGAAAGACTGGCTACAACTCCGACCGGACAACAGTCGTCTTTCTCTATaGCTTTGCCAAATCGACCCC +
Preference number: 4 (lower is better)
Translates to: SSASRGPLKDWLQLRPDNSRLSL*LCQIDP
Trigger: GGGGTCGATTTGGCAAAGCCATAGAGAAAGACGACT...GTTGTCCGGTCGGAGTTGTAGCCAGTCTTTCAGGGGACCCCGGGACGCTGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp GCGGCCTCTGTCCCGAGACTCGAGGCCGAGGCCAGCCCTGAAGGCACTTGTTCTAGCGAAAGGGAAGAATaGATGAAAATGAACCCTGAA +
Preference number: 4 (lower is better)
Translates to: AASVPRLEAEASPEGTCSSEREE*MKMNPE
Trigger: TTCAGGGTTCATTTTCATCCATTCTTCCCTTTCGCT...AGAACAAGTGCCTTCAGGGCTGGCCTCGGCCTCGAGTCTCGGGACAGAGGCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR CAA 72 bp TGCACGGGGCTGAACCAGACTCCACTTTGCAGCTCCTaGGTTTCCCGGGGTGAGGAATCACAAACACCTTTG +
Preference number: 4 (lower is better)
Translates to: CTGLNQTPLCSS*VSRGEESQTPL
Trigger: CAAAGGTGTTTGTGATTCCTCACCCCGGGAAACCAAGGAGCTGCAAAGTGGAGTCTGGTTCAGCCCCGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp GTGGCCAAAACACAAAAGAGACATCTGGTTACCTTCCTGGGAACTGCCCTCCCCTCTGCGCCAAGTCACTaGCATTCCCTGATGACGCTG +
Preference number: 4 (lower is better)
Translates to: VAKTQKRHLVTFLGTALPSAPSH*HSLMTL
Trigger: CAGCGTCATCAGGGAATGTCAGTGACTTGGCGCAGA...GGGGAGGGCAGTTCCCAGGAAGGTAACCAGATGTCTCTTTTGTGTTTTGGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp TCTTTGATAACGTCCACAAAGTGGGCGTCCGTTTTCTCCCGGATGTTCTTGAACTCTTGGCAGCCGTTTTaGGGTGCTCCTCCCTCGGCG +
Preference number: 4 (lower is better)
Translates to: SLITSTKWASVFSRMFLNSWQPF*GAPPSA
Trigger: CGCCGAGGGAGGAGCACCTCAAAACGGCTGCCAAGA...GTTCAAGAACATCCGGGAGAAAACGGACGCCCACTTTGTGGACGTTATCAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571467.1
CDS-3UTR TCA 90 bp GTGGATGCGCCAGGAGAGGAACTGACAGGAACAACAGCCATGAGCTTGTTACCTTCTCCCGGATGTTCTTaGACCTCAGCGGAAGGAGAG +
Preference number: 4 (lower is better)
Translates to: VDAPGEELTGTTAMSLLPSPGCS*TSAEGE
Trigger: CTCTCCTTCCGCTGAGGTTCAAGAACATCCGGGAGA...AGGTAACAAGCTCATGGCTGTTGTTCCTGTCAGTTCCTCTCCTGGCGCATCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571467.1
CDS-3UTR TCA 90 bp CTTTGCGGAGCATGTTCTGAGCGAGACAGCAAGGTCGTGAGCAAACGCCCAGCCCGAGACAGTGAGATTTaGCAGCGGAAAGCAAAATGC +
Preference number: 4 (lower is better)
Translates to: LCGACSERDSKVVSKRPARDSEI*QRKAKC
Trigger: GCATTTTGCTTTCCGCTGTCAAATCTCACTGTCTCG...GGCTGGGCGTTTGCTCACGACCTTGCTGTCTCGCTCAGAACATGCTCCGCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp ATGGCAAAACATAATCAGACAGGACCAGCAGCCAACTGCCCGGACGGAGCTCCCAGTGATGATGGGGACTaGTGCGGTGTGAAAACGAGA +
Preference number: 4 (lower is better)
Translates to: MAKHNQTGPAANCPDGAPSDDGD*CGVKTR
Trigger: TCTCGTTTTCACACCGCATCAGTCCCCATCATCACT...GGGAGCTCCGTCCGGGCAGTTGGCTGCTGGTCCTGTCTGATTATGTTTTGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp TTGGCCTGCATGCATGTGGGCGAGCCCCTAAACCCGCTCAGTGCAGGGAGCGCGATATATAATTCGATCTaGGCTGGGACTGAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: LACMHVGEPLNPLSAGSAIYNSI*AGTEKK
Trigger: TTTCTTCTCAGTCCCAGCTCAGATCGAATTATATAT...CGCGCTCCCTGCACTGAGCGGGTTTAGGGGCTCGCCCACATGCATGCAGGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp TCCGTTTTCTCCCGGATGTTCTTGAACCTCAGCGGAAGGAGAGCCGACTGGTCCCAGGAACAACAGCCATaGGCTTGTTACCTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: SVFSRMFLNLSGRRADWSQEQQP*ACYLGA
Trigger: AGCACCAAGGTAACAAGCTCATGGCTGTTGTTCCTG...GGACCAGTCGGCTCTCCTTCCGCTGAGGTTCAAGAACATCCGGGAGAAAACGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571467.1
CDS-3UTR GCA 90 bp CCAGCACGATGTGCTCGCTGCCAACAGACAAGAGATGCACGGCGTTTCCGCTGCAAGGTTTTGACAGTCTaGGCCAAGTCACTGACATTC +
Preference number: 4 (lower is better)
Translates to: PARCARCQQTRDARRFRCKVLTV*AKSLTF
Trigger: GAATGTCAGTGACTTGGCGCAGACTGTCAAAACCTT...GCAGCGGAAACGCCGTGCATCTCTTGTCTGTTGGCAGCGAGCACATCGTGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp ATGGCAAAACATAATCAGACAGGACCAGCAGCCAACTGCCCGGACGGAGCTCCCTGTATTTGCAGTGCTTaGGGTGGCTGTTGGAGGACA +
Preference number: 4 (lower is better)
Translates to: MAKHNQTGPAANCPDGAPCICSA*GGCWRT
Trigger: TGTCCTCCAACAGCCACCCCAAGCACTGCAAATACA...GGGAGCTCCGTCCGGGCAGTTGGCTGCTGGTCCTGTCTGATTATGTTTTGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp CTTTGCGGAGCATGTTCTGAGCGAGACAGCAAGGTCGTGAGCAAACGCCCAGCCGTCCTCCAGAAGCCTTaGTGCTGTTTTTATGCTCGT +
Preference number: 4 (lower is better)
Translates to: LCGACSERDSKVVSKRPAVLQKP*CCFYAR
Trigger: ACGAGCATAAAAACAGCACCAAGGCTTCTGGAGGAC...GGCTGGGCGTTTGCTCACGACCTTGCTGTCTCGCTCAGAACATGCTCCGCAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp AGCAAGGTCGTGAGCAAACGCCCAGCCCCTCAAAGCTACACAGCCTGGAGGGGACAATCTGTATGTCTCTaGGGAGGAGTAGTGATGATG +
Preference number: 4 (lower is better)
Translates to: SKVVSKRPAPQSYTAWRGQSVCL*GGVVMM
Trigger: CATCATCACTACTCCTCCCCAGAGACATACAGATTG...TCCCCTCCAGGCTGTGTAGCTTTGAGGGGCTGGGCGTTTGCTCACGACCTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp CTGCAAGATCTCACACAGAGAAGTCTGACTGTTGGTGAGCTTCTCCTCTTGGGGCTCCCAGCTGCTCCATaGGATTGGCCAGGTTCACAT +
Preference number: 4 (lower is better)
Translates to: LQDLTQRSLTVGELLLLGLPAAP*DWPGSH
Trigger: ATGTGAACCTGGCCAATCTCATGGAGCAGCTGGGAG...CCCCAAGAGGAGAAGCTCACCAACAGTCAGACTTCTCTGTGTGAGATCTTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571467.1
CDS-3UTR TCA 90 bp ACAAAGTGGGCGTCCGTTTTCTCCCGGATGTTCTTGAACCTCAGCGGAAGGAGAATTTGGGAGCAAATGTaGTTCCGCACGAAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: TKWASVFSRMFLNLSGRRIWEQM*FRTKGR
Trigger: CCTGCCCTTCGTGCGGAATCACATTTGCTCCCAAAT...TCTCCTTCCGCTGAGGTTCAAGAACATCCGGGAGAAAACGGACGCCCACTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571467.1
CDS-3UTR TCA 90 bp TCTTTGATAACGTCCACAAAGTGGGCGTCCGTTTTCTCCCGGATGTTCTTGAACCCTCTTGGGGAGGGCTaGGGAGCCCGTTCTGAGTTT +
Preference number: 4 (lower is better)
Translates to: SLITSTKWASVFSRMFLNPLGEG*GARSEF
Trigger: AAACTCAGAACGGGCTCCTCAGCCCTCCCCAAGAGG...GTTCAAGAACATCCGGGAGAAAACGGACGCCCACTTTGTGGACGTTATCAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571467.1
CDS-3UTR TCA 90 bp GTGGATGCGCCAGGAGAGGAACTGACAGGAACAACAGCCATGAGCTTGTTACCTAAGTCTGACTGTTGGTaGGCTTCTCCTCTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: VDAPGEELTGTTAMSLLPKSDCW*ASPLGE
Trigger: CTCCCCAAGAGGAGAAGCTCACCAACAGTCAGACTT...AGGTAACAAGCTCATGGCTGTTGTTCCTGTCAGTTCCTCTCCTGGCGCATCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571467.1
CDS-3UTR TCA 90 bp ATGGCAAAACATAATCAGACAGGACCAGCAGCCAACTGCCCGGACGGAGCTCCCGTGAAAACGAGACAGTaGGATTTGACAGCGGAAAGC +
Preference number: 4 (lower is better)
Translates to: MAKHNQTGPAANCPDGAPVKTRQ*DLTAES
Trigger: GCTTTCCGCTGTCAAATCTCACTGTCTCGTTTTCAC...GGGAGCTCCGTCCGGGCAGTTGGCTGCTGGTCCTGTCTGATTATGTTTTGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp GACAACGTTAAGCTCTGGGTGAGTCTGCACGGGGCTGAACCAGACTCCACTTTGAGGAGATGCTGTATTTaGAGTGCTTGGGGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: DNVKLWVSLHGAEPDSTLRRCCI*SAWGGC
Trigger: ACAGCCACCCCAAGCACTGCAAATACAGCATCTCCT...CAAAGTGGAGTCTGGTTCAGCCCCGTGCAGACTCACCCAGAGCTTAACGTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp ATGGCAAAACATAATCAGACAGGACCAGCAGCCAACTGCCCGGACGGAGCTCCCCTGACTTCTTCGATCTaGTGCATCTTAAAAGGGCGG +
Preference number: 4 (lower is better)
Translates to: MAKHNQTGPAANCPDGAPLTSSI*CILKGR
Trigger: CCGCCCTTTTAAGATGCAGCAGATCGAAGAAGTCAG...GGGAGCTCCGTCCGGGCAGTTGGCTGCTGGTCCTGTCTGATTATGTTTTGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp TGCCGTCAGCAGCCCTCGTGCCAGCTGCTTAGAAACTCGTGTCTCCAGCACGATCTCCAGAAGCCTTGGTaGTGTTTTTATGCTCGTCTT +
Preference number: 4 (lower is better)
Translates to: CRQQPSCQLLRNSCLQHDLQKPW*CFYARL
Trigger: AAGACGAGCATAAAAACAGCACCAAGGCTTCTGGAG...ATCGTGCTGGAGACACGAGTTTCTAAGCAGCTGGCACGAGGGCTGCTGACGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp GAAGGCTCAGGGTGTTTGAAAGACAACGTTAAGCTCTGGGTGAGTCTGCACGGGGCACGATGTGCTCGCTaGCAACAGACAAGAGATGCA +
Preference number: 4 (lower is better)
Translates to: EGSGCLKDNVKLWVSLHGARCAR*QQTRDA
Trigger: TGCATCTCTTGTCTGTTGGCAGCGAGCACATCGTGC...CCCGTGCAGACTCACCCAGAGCTTAACGTTGTCTTTCAAACACCCTGAGCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp AACCTCGGATGTTTATTTGGTATTTCCCTCTCCGATGAGTCAGCTTCCAGGACCGCTCTCCGGATCGTGTaGAAATGTGCAGGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: NLGCLFGISLSDESASRTALRIV*KCAGGA
Trigger: GGCTCCCCCTGCACATTTGCACACGATCCGGAGAGC...GGTCCTGGAAGCTGACTCATCGGAGAGGGAAATACCAAATAAACATCCGAGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp CCAGCACGATGTGCTCGCTGCCAACAGACAAGAGATGCACGGCGTTTCCGCTGCGTGTCTCGTGGGACGTaGGAAAAAGCAATAAAAATG +
Preference number: 4 (lower is better)
Translates to: PARCARCQQTRDARRFRCVSRGT*EKAIKM
Trigger: CATTTTTATTGCTTTTTCCCACGTCCCACGAGACAC...GCAGCGGAAACGCCGTGCATCTCTTGTCTGTTGGCAGCGAGCACATCGTGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp GGAGAGGAACTGACAGGAACAACAGCCATGAGCTTGTTACCTTGGTGCTGTTTTGTCCTCCAGAAGCCTTaGGTGGATGCGCCAGGAGAG +
Preference number: 4 (lower is better)
Translates to: GEELTGTTAMSLLPWCCFVLQKP*VDAPGE
Trigger: CTCTCCTGGCGCATCCACCCAAGGCTTCTGGAGGAC...AAAACAGCACCAAGGTAACAAGCTCATGGCTGTTGTTCCTGTCAGTTCCTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571467.1
CDS-3UTR TCA 90 bp AACCTCGGATGTTTATTTGGTATTTCCCTCTCCGATGAGTCAGCTTCCAGGACCACTGCTCGATGGCCTTaGTCATGCCCAGGCCCATCT +
Preference number: 4 (lower is better)
Translates to: NLGCLFGISLSDESASRTTARWP*SCPGPS
Trigger: AGATGGGCCTGGGCATGATCAAGGCCATCGAGCAGT...GGTCCTGGAAGCTGACTCATCGGAGAGGGAAATACCAAATAAACATCCGAGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp GTGGCCAAAACACAAAAGAGACATCTGGTTACCTTCCTGGGAACTGCCCTCCCCGGGACTGATGCGGTGTaGAAACGAGACAGTGAGATT +
Preference number: 4 (lower is better)
Translates to: VAKTQKRHLVTFLGTALPGTDAV*KRDSEI
Trigger: AATCTCACTGTCTCGTTTTCACACCGCATCAGTCCC...GGGGAGGGCAGTTCCCAGGAAGGTAACCAGATGTCTCTTTTGTGTTTTGGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp CAAGATCTCACACAGAGAAGTCTGACTGTTGGTGAGCTTCTCCTCTTGGGGAGGCAGAAATGTGAACTTTaGCGGCCACTCCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: QDLTQRSLTVGELLLLGRQKCEL*RPLPAA
Trigger: AGCAGCTGGGAGTGGCCGGCAAAGTTCACATTTCTG...CCTCCCCAAGAGGAGAAGCTCACCAACAGTCAGACTTCTCTGTGTGAGATCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571467.1
CDS-3UTR GCA 90 bp CTTCTCCTCTTGGGGAGGGCTGAGGAGCCCGTTCTGAGTTTTGGGATTAGGTCCTTGGTGCTGTTTTTATaGTCGTCTTGGCAGCCGTTT +
Preference number: 4 (lower is better)
Translates to: LLLLGRAEEPVLSFGIRSLVLFL*SSWQPF
Trigger: AAACGGCTGCCAAGACGAGCATAAAAACAGCACCAA...GGACCTAATCCCAAAACTCAGAACGGGCTCCTCAGCCCTCCCCAAGAGGAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000571467.1
CDS-3UTR GCA 90 bp TGCACAGGGACAACGGGCAAGACTGACAAGGAGTGCACCCTGGGCCTCATCAGCTATCAGATTCATGAATaGAAGTGTGTGTGCGCATGT +
Preference number: 4 (lower is better)
Translates to: CTGTTGKTDKECTLGLISYQIHE*KCVCAC
Trigger: ACATGCGCACACACACTTGCATTCATGAATCTGATA...GCTGATGAGGCCCAGGGTGCACTCCTTGTCAGTCTTGCCCGTTGTCCCTGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp ATAACGTCCACAAAGTGGGCGTCCGTTTTCTCCCGGATGTTCTTGAACCTCAGCATAACGTCCACAAAGTaGGCGTCCGTTTTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: ITSTKWASVFSRMFLNLSITSTK*ASVFSR
Trigger: CCGGGAGAAAACGGACGCCCACTTTGTGGACGTTAT...GCTGAGGTTCAAGAACATCCGGGAGAAAACGGACGCCCACTTTGTGGACGTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571467.1
CDS-3UTR TCA 90 bp GAAGGCTCAGGGTGTTTGAAAGACAACGTTAAGCTCTGGGTGAGTCTGCACGGGGGTTCCTCTCGGAACTaGAATTCTGTACTGCGTCAA +
Preference number: 4 (lower is better)
Translates to: EGSGCLKDNVKLWVSLHGGSSRN*NSVLRQ
Trigger: TTGACGCAGTACAGAATTTCAGTTCCGAGAGGAACC...CCCGTGCAGACTCACCCAGAGCTTAACGTTGTCTTTCAAACACCCTGAGCCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp GTGGCCAAAACACAAAAGAGACATCTGGTTACCTTCCTGGGAACTGCCCTCCCCTCCCTAGATACGGTGTaGGAACTCCATTTCAGAGCT +
Preference number: 4 (lower is better)
Translates to: VAKTQKRHLVTFLGTALPSLDTV*ELHFRA
Trigger: AGCTCTGAAATGGAGTTCTCACACCGTATCTAGGGA...GGGGAGGGCAGTTCCCAGGAAGGTAACCAGATGTCTCTTTTGTGTTTTGGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp AACCTCGGATGTTTATTTGGTATTTCCCTCTCCGATGAGTCAGCTTCCAGGACCTCCAGGTCCTTCCCGTaGATAATGGATTGCCCCACC +
Preference number: 4 (lower is better)
Translates to: NLGCLFGISLSDESASRTSRSFP*IMDCPT
Trigger: GGTGGGGCAATCCATTATGCACGGGAAGGACCTGGA...GGTCCTGGAAGCTGACTCATCGGAGAGGGAAATACCAAATAAACATCCGAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp GTGGCCAAAACACAAAAGAGACATCTGGTTACCTTCCTGGGAACTGCCCTCCCCGAGATTCTGTGGTTCTaGACTGAGGTATGCATCGGA +
Preference number: 4 (lower is better)
Translates to: VAKTQKRHLVTFLGTALPEILWF*TEVCIG
Trigger: TCCGATGCATACCTCAGTGCAGAACCACAGAATCTC...GGGGAGGGCAGTTCCCAGGAAGGTAACCAGATGTCTCTTTTGTGTTTTGGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp CTGTGGCGCTTGGAAAGCACAACAGCCAAATACAAATATTACTGTGTTTCGACAACCCGAGGGGCTTCGTaGCCCAGAGAGAACGTCTGC +
Preference number: 4 (lower is better)
Translates to: LWRLESTTAKYKYYCVSTTRGAS*PRENVC
Trigger: GCAGACGTTCTCTCTGGGCCACGAAGCCCCTCGGGT...TGTCGAAACACAGTAATATTTGTATTTGGCTGTTGTGCTTTCCAAGCGCCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp CTGTGGCGCTTGGAAAGCACAACAGCCAAATACAAATATTACTGTGTTTCGACACCTCTTGGGGAGGGCTaGGGAGCCCGTTCTGAGTTT +
Preference number: 4 (lower is better)
Translates to: LWRLESTTAKYKYYCVSTPLGEG*GARSEF
Trigger: AAACTCAGAACGGGCTCCTCAGCCCTCCCCAAGAGG...TGTCGAAACACAGTAATATTTGTATTTGGCTGTTGTGCTTTCCAAGCGCCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp ACTCCTTACCTCGAAAATCTAGAAATTCAAATGCAGACGTGTCTTTGGAAACTAGTCCCCCGCGGCCGCTaGCTCATGTCGGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: TPYLENLEIQMQTCLWKLVPRGR*LMSEEL
Trigger: CAGCTCTTCCGACATGAGGCAGCGGCCGCGGGGGAC...TAGTTTCCAAAGACACGTCTGCATTTGAATTTCTAGATTTTCGAGGTAAGGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp GGAGAGGAACTGACAGGAACAACAGCCATGAGCTTGTTACCTTGGTGCTGTTTTTCAGCAACCACGCTCTaGCCCAGCCGTTCAATAACT +
Preference number: 4 (lower is better)
Translates to: GEELTGTTAMSLLPWCCFSATTL*PSRSIT
Trigger: AGTTATTGAACGGCTGGGCCAGAGCGTGGTTGCTGA...AAAACAGCACCAAGGTAACAAGCTCATGGCTGTTGTTCCTGTCAGTTCCTCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571467.1
CDS-3UTR CCA 90 bp CGTGGGTGGCAGGGGCAGCTGGTGGGCTTCTCCTATTCCCCTAGCCTCAGAATTACTTCAGACTCAATATaGCAAAACATAATCAGACAG +
Preference number: 4 (lower is better)
Translates to: RGWQGQLVGFSYSPSLRITSDSI*QNIIRQ
Trigger: CTGTCTGATTATGTTTTGCCATATTGAGTCTGAAGT...AATTCTGAGGCTAGGGGAATAGGAGAAGCCCACCAGCTGCCCCTGCCACCCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp GAAGGCTCAGGGTGTTTGAAAGACAACGTTAAGCTCTGGGTGAGTCTGCACGGGCCCTTTCTTCGGTATTaGAAGACCAGCAAACTGACA +
Preference number: 4 (lower is better)
Translates to: EGSGCLKDNVKLWVSLHGPFLRY*KTSKLT
Trigger: TGTCAGTTTGCTGGTCTTCCAATACCGAAGAAAGGG...CCCGTGCAGACTCACCCAGAGCTTAACGTTGTCTTTCAAACACCCTGAGCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR CAA 72 bp CCAGGAGAGGAACTGACAGGAACAACAGCCATGAGCTaGTTACCTTGGTGCTGTTTTTATGCTCGTCTTGGC +
Preference number: 4 (lower is better)
Translates to: PGEELTGTTAMS*LPWCCFYARLG
Trigger: GCCAAGACGAGCATAAAAACAGCACCAAGGTAACAAGCTCATGGCTGTTGTTCCTGTCAGTTCCTCTCCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571467.1
CDS-3UTR TCA 90 bp AACCTCGGATGTTTATTTGGTATTTCCCTCTCCGATGAGTCAGCTTCCAGGACCGCCTCACACACTCTTTaGAACGTTGAGCTTGGTGAG +
Preference number: 4 (lower is better)
Translates to: NLGCLFGISLSDESASRTASHTL*NVELGE
Trigger: CTCACCAAGCTCAACGTTTCAAAGAGTGTGTGAGGC...GGTCCTGGAAGCTGACTCATCGGAGAGGGAAATACCAAATAAACATCCGAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp AAAGCACAACAGCCAAATACAAATATTACTGTGTTTCGACAAACAGAGCACCTCCCAGGATGGCCCCGATaGAGTGACGTGGTAGCCAGC +
Preference number: 4 (lower is better)
Translates to: KAQQPNTNITVFRQTEHLPGWPR*SDVVAS
Trigger: GCTGGCTACCACGTCACTGCATCGGGGCCATCCTGG...GAGGTGCTCTGTTTGTCGAAACACAGTAATATTTGTATTTGGCTGTTGTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp AAAGCACAACAGCCAAATACAAATATTACTGTGTTTCGACAAACAGAGCACCTCCTGAAGCACGACCCATaGCGTCAGCAGCCCTCGTGC +
Preference number: 4 (lower is better)
Translates to: KAQQPNTNITVFRQTEHLLKHDP*RQQPSC
Trigger: GCACGAGGGCTGCTGACGGCATGGGTCGTGCTTCAG...GAGGTGCTCTGTTTGTCGAAACACAGTAATATTTGTATTTGGCTGTTGTGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR CAA 72 bp GGAACTGACAGGAACAACAGCCATGAGCTTGTTACCTaGGTGCTGTTTTTATGCTCGTCTTGGCAGCCGTTT +
Preference number: 4 (lower is better)
Translates to: GTDRNNSHELVT*VLFLCSSWQPF
Trigger: AAACGGCTGCCAAGACGAGCATAAAAACAGCACCAAGGTAACAAGCTCATGGCTGTTGTTCCTGTCAGTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571467.1
CDS-3UTR TCA 90 bp GTGGCCAAAACACAAAAGAGACATCTGGTTACCTTCCTGGGAACTGCCCTCCCCACAAAGGTAAGTGCATaGCGGTATAGAGCAAAAAGA +
Preference number: 4 (lower is better)
Translates to: VAKTQKRHLVTFLGTALPTKVSA*RYRAKR
Trigger: TCTTTTTGCTCTATACCGTCATGCACTTACCTTTGT...GGGGAGGGCAGTTCCCAGGAAGGTAACCAGATGTCTCTTTTGTGTTTTGGCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp GTGGCCAAAACACAAAAGAGACATCTGGTTACCTTCCTGGGAACTGCCCTCCCCCTGCAAATAAAATACTaGCTTCTTCGATCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: VAKTQKRHLVTFLGTALPLQIKY*LLRSAA
Trigger: TGCAGCAGATCGAAGAAGTCAGTATTTTATTTGCAG...GGGGAGGGCAGTTCCCAGGAAGGTAACCAGATGTCTCTTTTGTGTTTTGGCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp AGGGGAGGACATTCAAATATACACCTTAATACTGATGCAGAAAGAGCTTCATGTGCGCGGCCGAGCCTGTaGACACTGGGAAGTGTATGT +
Preference number: 4 (lower is better)
Translates to: RGGHSNIHLNTDAERASCARPSL*TLGSVC
Trigger: ACATACACTTCCCAGTGTTCACAGGCTCGGCCGCGC...ACATGAAGCTCTTTCTGCATCAGTATTAAGGTGTATATTTGAATGTCCTCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp AAAGCACAACAGCCAAATACAAATATTACTGTGTTTCGACAAACAGAGCACCTCGCTGGTGCTGTGGGATaGCCCTGTGATCCGTGCACT +
Preference number: 4 (lower is better)
Translates to: KAQQPNTNITVFRQTEHLAGAVG*PCDPCT
Trigger: AGTGCACGGATCACAGGGTCATCCCACAGCACCAGC...GAGGTGCTCTGTTTGTCGAAACACAGTAATATTTGTATTTGGCTGTTGTGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp AAAGCACAACAGCCAAATACAAATATTACTGTGTTTCGACAAACAGAGCACCTCCCCTTTCTTCGGCTTTaGCGGGCTCCTTCCACGGTC +
Preference number: 4 (lower is better)
Translates to: KAQQPNTNITVFRQTEHLPFLRL*RAPSTV
Trigger: GACCGTGGAAGGAGCCCGTCAAAGCCGAAGAAAGGG...GAGGTGCTCTGTTTGTCGAAACACAGTAATATTTGTATTTGGCTGTTGTGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp AAAGCACAACAGCCAAATACAAATATTACTGTGTTTCGACAAACAGAGCACCTCGGCAGGGGCAGCTGGTaGGCTTCTCCTATTCCCCTA +
Preference number: 4 (lower is better)
Translates to: KAQQPNTNITVFRQTEHLGRGSW*ASPIPL
Trigger: TAGGGGAATAGGAGAAGCCCACCAGCTGCCCCTGCC...GAGGTGCTCTGTTTGTCGAAACACAGTAATATTTGTATTTGGCTGTTGTGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp ACTCCTTACCTCGAAAATCTAGAAATTCAAATGCAGACGTGTCTTTGGAAACTATGGATTGCCCCACCTTaGGGAAGGTGCTCCTGGACC +
Preference number: 4 (lower is better)
Translates to: TPYLENLEIQMQTCLWKLWIAPP*GRCSWT
Trigger: GGTCCAGGAGCACCTTCCTCAAGGTGGGGCAATCCA...TAGTTTCCAAAGACACGTCTGCATTTGAATTTCTAGATTTTCGAGGTAAGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp CTGTGGCGCTTGGAAAGCACAACAGCCAAATACAAATATTACTGTGTTTCGACACTGAGGAGCCCGTTCTaGGTTTTGGGATTAGGTCCT +
Preference number: 4 (lower is better)
Translates to: LWRLESTTAKYKYYCVSTLRSPF*VLGLGP
Trigger: AGGACCTAATCCCAAAACTCAGAACGGGCTCCTCAG...TGTCGAAACACAGTAATATTTGTATTTGGCTGTTGTGCTTTCCAAGCGCCACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp ACTCCTTACCTCGAAAATCTAGAAATTCAAATGCAGACGTGTCTTTGGAAACTAGAGGTATTGCCACCCTaGAGCACGACCCATGCCGTC +
Preference number: 4 (lower is better)
Translates to: TPYLENLEIQMQTCLWKLEVLPP*STTHAV
Trigger: GACGGCATGGGTCGTGCTTCAGGGTGGCAATACCTC...TAGTTTCCAAAGACACGTCTGCATTTGAATTTCTAGATTTTCGAGGTAAGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp AAAGCACAACAGCCAAATACAAATATTACTGTGTTTCGACAAACAGAGCACCTCGCGGCACCGAACTATTaGACGGGTTCCTCTCGGAAC +
Preference number: 4 (lower is better)
Translates to: KAQQPNTNITVFRQTEHLAAPNY*TGSSRN
Trigger: GTTCCGAGAGGAACCCGTGCAATAGTTCGGTGCCGC...GAGGTGCTCTGTTTGTCGAAACACAGTAATATTTGTATTTGGCTGTTGTGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp AGGGGAGGACATTCAAATATACACCTTAATACTGATGCAGAAAGAGCTTCATGTGGATGTCTGGGGAGATaGACAGCTGGTGCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: RGGHSNIHLNTDAERASCGCLGR*TAGAVG
Trigger: TCCCACAGCACCAGCTGTCCATCTCCCCAGACATCC...ACATGAAGCTCTTTCTGCATCAGTATTAAGGTGTATATTTGAATGTCCTCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp ACTCCTTACCTCGAAAATCTAGAAATTCAAATGCAGACGTGTCTTTGGAAACTAGTGGCCTCAGAAATGTaGACTTTGCCGGCCACTCCC +
Preference number: 4 (lower is better)
Translates to: TPYLENLEIQMQTCLWKLVASEM*TLPATP
Trigger: GGGAGTGGCCGGCAAAGTTCACATTTCTGAGGCCAC...TAGTTTCCAAAGACACGTCTGCATTTGAATTTCTAGATTTTCGAGGTAAGGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp AGGGGAGGACATTCAAATATACACCTTAATACTGATGCAGAAAGAGCTTCATGTTCTCCCGGATGTTCTTaGACCTCAGCGGAAGGAGAG +
Preference number: 4 (lower is better)
Translates to: RGGHSNIHLNTDAERASCSPGCS*TSAEGE
Trigger: CTCTCCTTCCGCTGAGGTTCAAGAACATCCGGGAGA...ACATGAAGCTCTTTCTGCATCAGTATTAAGGTGTATATTTGAATGTCCTCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp CTGTGGCGCTTGGAAAGCACAACAGCCAAATACAAATATTACTGTGTTTCGACAAGTGGAGGCGGTAGCTaGCTTCAAATTCGCGATTCA +
Preference number: 4 (lower is better)
Translates to: LWRLESTTAKYKYYCVSTSGGGS*LQIRDS
Trigger: TGAATCGCGAATTTGAAGTCAGCTACCGCCTCCACT...TGTCGAAACACAGTAATATTTGTATTTGGCTGTTGTGCTTTCCAAGCGCCACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp ACTCCTTACCTCGAAAATCTAGAAATTCAAATGCAGACGTGTCTTTGGAAACTAGAGTCTGCACGGGGCTaGACCAGACTCCACTTTGCA +
Preference number: 4 (lower is better)
Translates to: TPYLENLEIQMQTCLWKLESARG*TRLHFA
Trigger: TGCAAAGTGGAGTCTGGTTCAGCCCCGTGCAGACTC...TAGTTTCCAAAGACACGTCTGCATTTGAATTTCTAGATTTTCGAGGTAAGGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp AGGGGAGGACATTCAAATATACACCTTAATACTGATGCAGAAAGAGCTTCATGTGCACGGCGTTTCCGCTaGAGAGATTCTGTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: RGGHSNIHLNTDAERASCARRFR*RDSVVL
Trigger: CAGAACCACAGAATCTCTGCAGCGGAAACGCCGTGC...ACATGAAGCTCTTTCTGCATCAGTATTAAGGTGTATATTTGAATGTCCTCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp TCTTTGATAACGTCCACAAAGTGGGCGTCCGTTTTCTCCCGGATGTTCTTGAACAGCTTGTTACCTTGGTaGTGTTTTTATGCTCGTCTT +
Preference number: 4 (lower is better)
Translates to: SLITSTKWASVFSRMFLNSLLPW*CFYARL
Trigger: AAGACGAGCATAAAAACAGCACCAAGGTAACAAGCT...GTTCAAGAACATCCGGGAGAAAACGGACGCCCACTTTGTGGACGTTATCAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571467.1
CDS-3UTR CCA 90 bp TCTTTGATAACGTCCACAAAGTGGGCGTCCGTTTTCTCCCGGATGTTCTTGAACCTAAGTATTTTGCGGTaGCCTCAGAAATGTGAACTT +
Preference number: 4 (lower is better)
Translates to: SLITSTKWASVFSRMFLNLSILR*PQKCEL
Trigger: AAGTTCACATTTCTGAGGCCACCGCAAAATACTTAG...GTTCAAGAACATCCGGGAGAAAACGGACGCCCACTTTGTGGACGTTATCAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571467.1
CDS-3UTR CCA 90 bp AACCTCGGATGTTTATTTGGTATTTCCCTCTCCGATGAGTCAGCTTCCAGGACCCTCTTGGCGGATTACTaGCACTTTATATCAGATTCA +
Preference number: 4 (lower is better)
Translates to: NLGCLFGISLSDESASRTLLADY*HFISDS
Trigger: TGAATCTGATATAAAGTGCCAGTAATCCGCCAAGAG...GGTCCTGGAAGCTGACTCATCGGAGAGGGAAATACCAAATAAACATCCGAGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp CTGTGGCGCTTGGAAAGCACAACAGCCAAATACAAATATTACTGTGTTTCGACAACACACATTCAATGCTaGAGTATTGCTTCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: LWRLESTTAKYKYYCVSTTHIQC*SIASCP
Trigger: AGGGCAGGAAGCAATACTTCAGCATTGAATGTGTGT...TGTCGAAACACAGTAATATTTGTATTTGGCTGTTGTGCTTTCCAAGCGCCACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR GCA 90 bp ACTCCTTACCTCGAAAATCTAGAAATTCAAATGCAGACGTGTCTTTGGAAACTATGGGGAAGAAGTGTGTaGGGAGAACTTTGCGGAGCA +
Preference number: 4 (lower is better)
Translates to: TPYLENLEIQMQTCLWKLWGRSV*GELCGA
Trigger: TGCTCCGCAAAGTTCTCCGCACACACTTCTTCCCCA...TAGTTTCCAAAGACACGTCTGCATTTGAATTTCTAGATTTTCGAGGTAAGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp ACTCCTTACCTCGAAAATCTAGAAATTCAAATGCAGACGTGTCTTTGGAAACTACGCGCATCATCTCCTTaGCGAACTCGAACAGGATCT +
Preference number: 4 (lower is better)
Translates to: TPYLENLEIQMQTCLWKLRASSP*RTRTGS
Trigger: AGATCCTGTTCGAGTTCGCCAAGGAGATGATGCGCG...TAGTTTCCAAAGACACGTCTGCATTTGAATTTCTAGATTTTCGAGGTAAGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp AGGGGAGGACATTCAAATATACACCTTAATACTGATGCAGAAAGAGCTTCATGTGGCAACTGTGGCGCTTaGAAAGCACAACAGCCAAAT +
Preference number: 4 (lower is better)
Translates to: RGGHSNIHLNTDAERASCGNCGA*KAQQPN
Trigger: ATTTGGCTGTTGTGCTTTCCAAGCGCCACAGTTGCC...ACATGAAGCTCTTTCTGCATCAGTATTAAGGTGTATATTTGAATGTCCTCCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp AGGGGAGGACATTCAAATATACACCTTAATACTGATGCAGAAAGAGCTTCATGTGGTTATCAAAGGTTTTaGCAGTCTGCGCCAAGTCAC +
Preference number: 4 (lower is better)
Translates to: RGGHSNIHLNTDAERASCGYQRF*QSAPSH
Trigger: GTGACTTGGCGCAGACTGTCAAAACCTTTGATAACC...ACATGAAGCTCTTTCTGCATCAGTATTAAGGTGTATATTTGAATGTCCTCCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp ACTCCTTACCTCGAAAATCTAGAAATTCAAATGCAGACGTGTCTTTGGAAACTACTTGGTTTCCCGGGGTaGGGAATCACAAACACCTTT +
Preference number: 4 (lower is better)
Translates to: TPYLENLEIQMQTCLWKLLGFPG*GITNTF
Trigger: AAAGGTGTTTGTGATTCCTCACCCCGGGAAACCAAG...TAGTTTCCAAAGACACGTCTGCATTTGAATTTCTAGATTTTCGAGGTAAGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp AAAGCACAACAGCCAAATACAAATATTACTGTGTTTCGACAAACAGAGCACCTCGCGTCAGAAACACTGTaGTCGACAGAAACACATCCA +
Preference number: 4 (lower is better)
Translates to: KAQQPNTNITVFRQTEHLASETL*STETHP
Trigger: TGGATGTGTTTCTGTCGACCACAGTGTTTCTGACGC...GAGGTGCTCTGTTTGTCGAAACACAGTAATATTTGTATTTGGCTGTTGTGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR TCA 90 bp ACTCCTTACCTCGAAAATCTAGAAATTCAAATGCAGACGTGTCTTTGGAAACTACTTGGCATCACGGAATaGATCATCCTCTCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: TPYLENLEIQMQTCLWKLLGITE*IILSLR
Trigger: CCTCAAAGAGAGGATGATTCATTCCGTGATGCCAAG...TAGTTTCCAAAGACACGTCTGCATTTGAATTTCTAGATTTTCGAGGTAAGGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CCA 90 bp AGGGGAGGACATTCAAATATACACCTTAATACTGATGCAGAAAGAGCTTCATGTATCGGCTATGATTCTTaGCATCACGGAATGAATCAT +
Preference number: 4 (lower is better)
Translates to: RGGHSNIHLNTDAERASCIGYDS*HHGMNH
Trigger: ATGATTCATTCCGTGATGCCAAGAATCATAGCCGAT...ACATGAAGCTCTTTCTGCATCAGTATTAAGGTGTATATTTGAATGTCCTCCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
3UTR CAA 72 bp AAGCTATTCGAGGGTTTTGTAACTGATGCTCTACATTaGTTTGCATTGGATAAAATTGTGTGTGCTTGTTTA +
Preference number: 4 (lower is better)
Translates to: KLFEGFVTDALH*FALDKIVCACL
Trigger: TAAACAAGCACACACAATTTTATCCAATGCAAACAAATGTAGAGCATCAGTTACAAAACCCTCGAATAGCTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS GCA 90 bp AGATGCGGCCGCCGCCGCGCCCGCCGCCGTGTCCCCCGCGGCCGCTaGCTCATGTCGGAAGAGCTGCCGCCGCCACCATCTCCGGCCCCT +
Preference number: 5 (lower is better)
Translates to: RCGRRRARRRVPRGR*LMSEELPPPPSPAP
Trigger: AGGGGCCGGAGATGGTGGCGGCGGCAGCTCTTCCGACATGAGGCAGCGGCCGCGGGGGACACGGCGGCGGGCGCGGCGGCGGCCGCATCT
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CCA 90 bp GGGACCGCTTTGCTCGCTCGCCTTCCGCGCCTCTCGCCCCGAGGGTaGCCTCCGCGCCGCGCGGCTTCTCCTCCTCGCGCGCTCGCCTCC +
Preference number: 5 (lower is better)
Translates to: GTALLARLPRLSPRG*PPRRAASPPRALAS
Trigger: GGAGGCGAGCGCGCGAGGAGGAGAAGCCGCGCGGCGCGGAGGCCACCCTCGGGGCGAGAGGCGCGGAAGGCGAGCGAGCAAAGCGGTCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS GCA 90 bp CACCAGCGGCTGGAGGCCCTCTCGAACAGCTGGGGCAGCTTCTTCTaGCTGCGCAGCCGGCCTCCGCCGCCCACTCGCCGGGGGACGCCC +
Preference number: 5 (lower is better)
Translates to: HQRLEALSNSWGSFF*LRSRPPPPTRRGTP
Trigger: GGGCGTCCCCCGGCGAGTGGGCGGCGGAGGCCGGCTGCGCAGGCAGAAGAAGCTGCCCCAGCTGTTCGAGAGGGCCTCCAGCCGCTGGTG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS GCA 90 bp GCCTGCGCACAAACAACTCCGCTGGCGGCGCGGAGCCCTCCATCCTaGAGGAGCCGCGCTCCGATGCGTCAAAGGCGGCGCGCGGCCGGC +
Preference number: 5 (lower is better)
Translates to: ACAQTTPLAARSPPS*RSRAPMRQRRRAAG
Trigger: GCCGGCCGCGCGCCGCCTTTGACGCATCGGAGCGCGGCTCCTGCAGGATGGAGGGCTCCGCGCCGCCAGCGGAGTTGTTTGTGCGCAGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CCA 90 bp GAGCGCTCCCAGCCCCGCGAGCCGCCTGCGCACAAACAACTCCGCTaGCGGCGCGGAGCCCTCCATCCTGCAGGAGCCGCGCTCCGATGC +
Preference number: 5 (lower is better)
Translates to: ERSQPREPPAHKQLR*RRGALHPAGAALRC
Trigger: GCATCGGAGCGCGGCTCCTGCAGGATGGAGGGCTCCGCGCCGCCAGCGGAGTTGTTTGTGCGCAGGCGGCTCGCGGGGCTGGGAGCGCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp GGAGCGCGGCTCACCCACAGCCCACGGGGCGCGGTGCTCGGGAAAGTGCGGGTGTTCACCGAGTCGAACTaGGGGTCCCACCAGCGGCTG +
Preference number: 5 (lower is better)
Translates to: GARLTHSPRGAVLGKVRVFTESN*GSHQRL
Trigger: CAGCCGCTGGTGGGACCCCAAGTTCGACTCGGTGAA...CACCCGCACTTTCCCGAGCACCGCGCCCCGTGGGCTGTGGGTGAGCCGCGCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS TCA 90 bp GCGCTCGCCTCCTCCAGCTGCGGCTCCGGAGGGAAGTTCAGACCTTaGGCGCTCCCAGCCCCGCGAGCCGCCTGCGCACAAACAACTCCG +
Preference number: 5 (lower is better)
Translates to: ALASSSCGSGGKFRP*ALPAPRAACAQTTP
Trigger: CGGAGTTGTTTGTGCGCAGGCGGCTCGCGGGGCTGGGAGCGCTCAAGGTCTGAACTTCCCTCCGGAGCCGCAGCTGGAGGAGGCGAGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CCA 90 bp TCGAACTTGGGGTCCCACCAGCGGCTGGAGGCCCTCTCGAACAGCTaGGGCAGCTTCTTCTGCCTGCGCAGCCGGCCTCCGCCGCCCACT +
Preference number: 5 (lower is better)
Translates to: SNLGSHQRLEALSNS*GSFFCLRSRPPPPT
Trigger: AGTGGGCGGCGGAGGCCGGCTGCGCAGGCAGAAGAAGCTGCCCCAGCTGTTCGAGAGGGCCTCCAGCCGCTGGTGGGACCCCAAGTTCGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp GGAGCGCGGCTCACCCACAGCCCACGGGGCGCGGTGCTCGGGAAAGTGCGGGTGCTGGCATTTGCTGTCTaGGCCTGCATGCATGTGGGC +
Preference number: 5 (lower is better)
Translates to: GARLTHSPRGAVLGKVRVLAFAV*ACMHVG
Trigger: GCCCACATGCATGCAGGCCAAGACAGCAAATGCCAG...CACCCGCACTTTCCCGAGCACCGCGCCCCGTGGGCTGTGGGTGAGCCGCGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS TCA 90 bp TGTGGGCCGGGCTGTGGCCGTAAGGTTGGAGCTGTCGCCGCGTCCTaGGACAGGCGTCAAGACCTGGAACTGCGCAGCCAGGGTCAGGGC +
Preference number: 5 (lower is better)
Translates to: CGPGCGRKVGAVAAS*DRRQDLELRSQGQG
Trigger: GCCCTGACCCTGGCTGCGCAGTTCCAGGTCTTGACGCCTGTCTCAGGACGCGGCGACAGCTCCAACCTTACGGCCACAGCCCGGCCCACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS GCA 90 bp GGGAGTAGACGGCCAGTGCGGGAAGCGACACCAGGATGGCCCCGATaGAGTGACGTGGTAGCCAGCCGGCGATCCACTCCAGCAGGCGCT +
Preference number: 5 (lower is better)
Translates to: GSRRPVREATPGWPR*SDVVASRRSTPAGA
Trigger: AGCGCCTGCTGGAGTGGATCGCCGGCTGGCTACCACGTCACTGCATCGGGGCCATCCTGGTGTCGCTTCCCGCACTGGCCGTCTACTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294016.8
ENST00000576936.5
CDS-3UTR CAA 90 bp GGAGCGCGGCTCACCCACAGCCCACGGGGCGCGGTGCTCGGGAAAGTGCGGGTGGCGTGGGCAGACTTGTaGGCACTCATCTTGGTGAAG +
Preference number: 5 (lower is better)
Translates to: GARLTHSPRGAVLGKVRVAWADL*ALILVK
Trigger: CTTCACCAAGATGAGTGCCAACAAGTCTGCCCACGC...CACCCGCACTTTCCCGAGCACCGCGCCCCGTGGGCTGTGGGTGAGCCGCGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp GGAGCGCGGCTCACCCACAGCCCACGGGGCGCGGTGCTCGGGAAAGTGCGGGTGGTGGCTCCGATGGTCTaGATCTTCTCGATGCTGCTG +
Preference number: 5 (lower is better)
Translates to: GARLTHSPRGAVLGKVRVVAPMV*IFSMLL
Trigger: CAGCAGCATCGAGAAGATCAAGACCATCGGAGCCAC...CACCCGCACTTTCCCGAGCACCGCGCCCCGTGGGCTGTGGGTGAGCCGCGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp GGAGCGCGGCTCACCCACAGCCCACGGGGCGCGGTGCTCGGGAAAGTGCGGGTGACGCGCATCATCTCCTaGGCGAACTCGAACAGGATC +
Preference number: 5 (lower is better)
Translates to: GARLTHSPRGAVLGKVRVTRIIS*ANSNRI
Trigger: GATCCTGTTCGAGTTCGCCAAGGAGATGATGCGCGT...CACCCGCACTTTCCCGAGCACCGCGCCCCGTGGGCTGTGGGTGAGCCGCGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS TCA 90 bp GCCCGGCCCCCACGACGGTGGCGAGGGAGGACCTCATCCAGGAGCTaGGCTGGCAGAAGTTACAGTAGTGCACGACGGCAATCAGCGCGG +
Preference number: 5 (lower is better)
Translates to: ARPPRRWRGRTSSRS*AGRSYSSARRQSAR
Trigger: CCGCGCTGATTGCCGTCGTGCACTACTGTAACTTCTGCCAGCTCAGCTCCTGGATGAGGTCCTCCCTCGCCACCGTCGTGGGGGCCGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294016.8
ENST00000576936.5
CDS CCA 90 bp CTGGACCTCACCTGGGACATGACGAACAGGTGGACCCCGATGGCGTaGATGCAGCCGTGGAGCAGCCCCCTGCTCAGCAGCTCCCAGTGC +
Preference number: 5 (lower is better)
Translates to: LDLTWDMTNRWTPMA*MQPWSSPLLSSSQC
Trigger: GCACTGGGAGCTGCTGAGCAGGGGGCTGCTCCACGGCTGCATCCACGCCATCGGGGTCCACCTGTTCGTCATGTCCCAGGTGAGGTCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp TTGGCCTGCATGCATGTGGGCGAGCCCCTAAACCCGCTCAGTGCAGGGAGCGCGTTGACGCGCACGCTGTaGCTGTCCCCGCTGGAGTCG +
Preference number: 5 (lower is better)
Translates to: LACMHVGEPLNPLSAGSALTRTL*LSPLES
Trigger: CGACTCCAGCGGGGACAGCAACAGCGTGCGCGTCAA...CGCGCTCCCTGCACTGAGCGGGTTTAGGGGCTCGCCCACATGCATGCAGGCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp GGAGCGCGGCTCACCCACAGCCCACGGGGCGCGGTGCTCGGGAAAGTGCGGGTGTGCCGGGCGTACAGCTaGGTGAAGGTAAACAGAAAG +
Preference number: 5 (lower is better)
Translates to: GARLTHSPRGAVLGKVRVCRAYS*VKVNRK
Trigger: CTTTCTGTTTACCTTCACCAAGCTGTACGCCCGGCA...CACCCGCACTTTCCCGAGCACCGCGCCCCGTGGGCTGTGGGTGAGCCGCGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp GCGGCCTCTGTCCCGAGACTCGAGGCCGAGGCCAGCCCTGAAGGCACTTGTTCTGCTGTGGCCGTAAGGTaGGAGCTGTCGCCGCGTCCT +
Preference number: 5 (lower is better)
Translates to: AASVPRLEAEASPEGTCSAVAVR*ELSPRP
Trigger: AGGACGCGGCGACAGCTCCAACCTTACGGCCACAGC...AGAACAAGTGCCTTCAGGGCTGGCCTCGGCCTCGAGTCTCGGGACAGAGGCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS TCA 90 bp AGACCTGGAACTGCGCAGCCAGGGTCAGGGCGAACACCAGCAGGGTaGGAGCCAGCGAGGTCCACGCGTAATGCCGGGCGTACAGCTTGG +
Preference number: 5 (lower is better)
Translates to: RPGTAQPGSGRTPAG*EPARSTRNAGRTAW
Trigger: CCAAGCTGTACGCCCGGCATTACGCGTGGACCTCGCTGGCTCTCACCCTGCTGGTGTTCGCCCTGACCCTGGCTGCGCAGTTCCAGGTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS TCA 90 bp GCACACGCCACAGACAGCATGGCCCATGGCGGCCTCGGAGGAAGCTaGAAGGGTCCTGGGTACAGTGCAGGTGGGAAGGAGGGGGCAGGA +
Preference number: 5 (lower is better)
Translates to: AHATDSMAHGGLGGS*KGPGYSAGGKEGAG
Trigger: TCCTGCCCCCTCCTTCCCACCTGCACTGTACCCAGGACCCTTTCAGCTTCCTCCGAGGCCGCCATGGGCCATGCTGTCTGTGGCGTGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574721.1
CDS GCA 90 bp TTGGAGCTGTCGCCGCGTCCTGAGACAGGCGTCAAGACCTGGAACTaGGCAGCCAGGGTCAGGGCGAACACCAGCAGGGTGAGAGCCAGC +
Preference number: 5 (lower is better)
Translates to: LELSPRPETGVKTWN*AARVRANTSRVRAS
Trigger: GCTGGCTCTCACCCTGCTGGTGTTCGCCCTGACCCTGGCTGCGCAGTTCCAGGTCTTGACGCCTGTCTCAGGACGCGGCGACAGCTCCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CCA 90 bp CCTCCTCCAGGTTCACCGAGTCGAACTTGGGGTCCCACCAGCGGCTaGAGGCCCTCTCGAACAGCTGGGGCAGCTTCTTCTGCCTGCGCA +
Preference number: 5 (lower is better)
Translates to: PPPGSPSRTWGPTSG*RPSRTAGAASSACA
Trigger: TGCGCAGGCAGAAGAAGCTGCCCCAGCTGTTCGAGAGGGCCTCCAGCCGCTGGTGGGACCCCAAGTTCGACTCGGTGAACCTGGAGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp TGCCGTCAGCAGCCCTCGTGCCAGCTGCTTAGAAACTCGTGTCTCCAGCACGATGGCTCCGGGACCGCTTaGCTCGCTCGCCTTCCGCGC +
Preference number: 5 (lower is better)
Translates to: CRQQPSCQLLRNSCLQHDGSGTA*LARLPR
Trigger: GCGCGGAAGGCGAGCGAGCAAAGCGGTCCCGGAGCC...ATCGTGCTGGAGACACGAGTTTCTAAGCAGCTGGCACGAGGGCTGCTGACGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp TTGGCCTGCATGCATGTGGGCGAGCCCCTAAACCCGCTCAGTGCAGGGAGCGCGTGCTTGGGGTGGCTGTaGGAGGACAGCTGCTTGGGG +
Preference number: 5 (lower is better)
Translates to: LACMHVGEPLNPLSAGSACLGWL*EDSCLG
Trigger: CCCCAAGCAGCTGTCCTCCAACAGCCACCCCAAGCA...CGCGCTCCCTGCACTGAGCGGGTTTAGGGGCTCGCCCACATGCATGCAGGCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp CTGAGACCCCCGAGGCCTGGGCACACGGGCGTCGTGCCCGGCTGGCATTTGCTGCTGTATTTGCAGTGCTaGGGGTGGCTGTTGGAGGAC +
Preference number: 5 (lower is better)
Translates to: LRPPRPGHTGVVPGWHLLLYLQC*GWLLED
Trigger: GTCCTCCAACAGCCACCCCAAGCACTGCAAATACAG...CAGCAAATGCCAGCCGGGCACGACGCCCGTGTGCCCAGGCCTCGGGGGTCTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp CTGCCGGCACAGACCCCCGTGGTTCTGAGCTGGACCCCGGCAGGGAGGAGCCCCTTTTTCTTCCTGTTCTaGGGGCTCGAGGTGGCATGC +
Preference number: 5 (lower is better)
Translates to: LPAQTPVVLSWTPAGRSPFFFLF*GLEVAC
Trigger: GCATGCCACCTCGAGCCCCAAGAACAGGAAGAAAAA...GGGGCTCCTCCCTGCCGGGGTCCAGCTCAGAACCACGGGGGTCTGTGCCGGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp CGGGCAAGACTGACAAGGAGTGCACCCTGGGCCTCATCAGCGTCCCGGGGTCCCATGTCGTACAGCAGCTaGGTGGTGCCGATGACCCCG +
Preference number: 5 (lower is better)
Translates to: RARLTRSAPWASSASRGPMSYSS*VVPMTP
Trigger: CGGGGTCATCGGCACCACCAAGCTGCTGTACGACAT...GGGACCCCGGGACGCTGATGAGGCCCAGGGTGCACTCCTTGTCAGTCTTGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CCA 90 bp TTGAGGAAGGTGCTCCTGGACCTCACCTGGGACATGACGAACAGGTaGACCCCGATGGCGTGGATGCAGCCGTGGAGCAGCCCCCTGCTC +
Preference number: 5 (lower is better)
Translates to: LRKVLLDLTWDMTNR*TPMAWMQPWSSPLL
Trigger: GAGCAGGGGGCTGCTCCACGGCTGCATCCACGCCATCGGGGTCCACCTGTTCGTCATGTCCCAGGTGAGGTCCAGGAGCACCTTCCTCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CCA 90 bp GCTCAGGAATACAGAGCCGCTGCGAGCCCCCTCAGGGAGCCAGGCTaGTCCCGAGGGCCCAGCTTTCCCAAGACGCACCTGTGGTCTATT +
Preference number: 5 (lower is better)
Translates to: AQEYRAAASPLREPG*SRGPSFPKTHLWSI
Trigger: AATAGACCACAGGTGCGTCTTGGGAAAGCTGGGCCCTCGGGACCAGCCTGGCTCCCTGAGGGGGCTCGCAGCGGCTCTGTATTCCTGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574721.1
CDS-3UTR CAA 90 bp CAGGGGGAGCCCCCGCGGGTGACGTCAGTGTGGATGAAGTCACGGGTGTGGCAGATCCTGCTGGCGATGTaGACGGTGTCTCCCCAGATG +
Preference number: 5 (lower is better)
Translates to: QGEPPRVTSVWMKSRVWQILLAM*TVSPQM
Trigger: CATCTGGGGAGACACCGTCAACATCGCCAGCAGGAT...CTGCCACACCCGTGACTTCATCCACACTGACGTCACCCGCGGGGGCTCCCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp TTGGCCTGCATGCATGTGGGCGAGCCCCTAAACCCGCTCAGTGCAGGGAGCGCGCCCCTTTCTTCGGCTTaGACGGGCTCCTTCCACGGT +
Preference number: 5 (lower is better)
Translates to: LACMHVGEPLNPLSAGSAPLSSA*TGSFHG
Trigger: ACCGTGGAAGGAGCCCGTCAAAGCCGAAGAAAGGGG...CGCGCTCCCTGCACTGAGCGGGTTTAGGGGCTCGCCCACATGCATGCAGGCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS TCA 90 bp CCAACAAGAGCAGGAGAAAGAAGACGAGAACCACCTCCTGGCCGATaGGGCTGGCGGGCCGCCGGAGGTCACGCGGCACCGAACTATTGC +
Preference number: 5 (lower is better)
Translates to: PTRAGERRREPPPGR*GWRAAGGHAAPNYC
Trigger: GCAATAGTTCGGTGCCGCGTGACCTCCGGCGGCCCGCCAGCCTCATCGGCCAGGAGGTGGTTCTCGTCTTCTTTCTCCTGCTCTTGTTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS GCA 90 bp AGCGCAGTTCAGATGGAGAAACAGGCAACACGTGCGGAGCACTGCTaGTCTGGGCCAGGCACAGGGCAGGAAGGCTCTCGGAGGGCTGTC +
Preference number: 5 (lower is better)
Translates to: SAVQMEKQATRAEHC*SGPGTGQEGSRRAV
Trigger: GACAGCCCTCCGAGAGCCTTCCTGCCCTGTGCCTGGCCCAGAGCAGCAGTGCTCCGCACGTGTTGCCTGTTTCTCCATCTGAACTGCGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574721.1
CDS CCA 90 bp GTAAGGTTGGAGCTGTCGCCGCGTCCTGAGACAGGCGTCAAGACCTaGAACTGCGCAGCCAGGGTCAGGGCGAACACCAGCAGGGTGAGA +
Preference number: 5 (lower is better)
Translates to: VRLELSPRPETGVKT*NCAARVRANTSRVR
Trigger: TCTCACCCTGCTGGTGTTCGCCCTGACCCTGGCTGCGCAGTTCCAGGTCTTGACGCCTGTCTCAGGACGCGGCGACAGCTCCAACCTTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CCA 90 bp AACCAGACCAACAAGAGCAGGAGAAAGAAGACGAGAACCACCTCCTaGCCGATGAGGCTGGCGGGCCGCCGGAGGTCACGCGGCACCGAA +
Preference number: 5 (lower is better)
Translates to: NQTNKSRRKKTRTTS*PMRLAGRRRSRGTE
Trigger: TTCGGTGCCGCGTGACCTCCGGCGGCCCGCCAGCCTCATCGGCCAGGAGGTGGTTCTCGTCTTCTTTCTCCTGCTCTTGTTGGTCTGGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp CCGGATGTTCTTGAACCTCAGCGGAAGGAGAGCCGACTGGTCCAGGCTCACCCCGTCTTGGCAGCCGTTTaGAGGTGCTCCTCCCTCGGC +
Preference number: 5 (lower is better)
Translates to: PDVLEPQRKESRLVQAHPVLAAV*RCSSLG
Trigger: GCCGAGGGAGGAGCACCTCAAAACGGCTGCCAAGAC...GGGGTGAGCCTGGACCAGTCGGCTCTCCTTCCGCTGAGGTTCAAGAACATCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571467.1
CDS-3UTR CAA 90 bp CTGCCGGCACAGACCCCCGTGGTTCTGAGCTGGACCCCGGCAGGGAGGAGCCCCTTGAACCACAGCATGTaGTTGTTGAAGTCGTCCACC +
Preference number: 5 (lower is better)
Translates to: LPAQTPVVLSWTPAGRSPLNHSM*LLKSST
Trigger: GGTGGACGACTTCAACAACAACATGCTGTGGTTCAA...GGGGCTCCTCCCTGCCGGGGTCCAGCTCAGAACCACGGGGGTCTGTGCCGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp GCAGCCAACTGCCCGGACGGAGCTCCCCCACACCACCCTCGGGATTCCGCCCCTACGCGGAGCTTGAAGTaGAACCACAGCATGTTGTTG +
Preference number: 5 (lower is better)
Translates to: AANCPDGAPPHHPRDSAPTRSLK*NHSMLL
Trigger: CAACAACATGCTGTGGTTCAACTTCAAGCTCCGCGT...AGGGGCGGAATCCCGAGGGTGGTGTGGGGGAGCTCCGTCCGGGCAGTTGGCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp CTGAGACCCCCGAGGCCTGGGCACACGGGCGTCGTGCCCGGCTGGCATTTGCTGTGTGATCCGTGCACTTaGGGTACAGGTAGGTCTTCA +
Preference number: 5 (lower is better)
Translates to: LRPPRPGHTGVVPGWHLLCDPCT*GTGRSS
Trigger: TGAAGACCTACCTGTACCCAAAGTGCACGGATCACA...CAGCAAATGCCAGCCGGGCACGACGCCCGTGTGCCCAGGCCTCGGGGGTCTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp TTGGCCTGCATGCATGTGGGCGAGCCCCTAAACCCGCTCAGTGCAGGGAGCGCGCCTTCGCACCCCCTCTaGGCGGATTACTGGCACTTT +
Preference number: 5 (lower is better)
Translates to: LACMHVGEPLNPLSAGSAPSHPL*ADYWHF
Trigger: AAAGTGCCAGTAATCCGCCAAGAGGGGGTGCGAAGG...CGCGCTCCCTGCACTGAGCGGGTTTAGGGGCTCGCCCACATGCATGCAGGCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp GGAGCGCGGCTCACCCACAGCCCACGGGGCGCGGTGCTCGGGAAAGTGCGGGTGACCTCGGATGTTTATTaGGTATTTCCCTCTCCGATG +
Preference number: 5 (lower is better)
Translates to: GARLTHSPRGAVLGKVRVTSDVY*VFPSPM
Trigger: CATCGGAGAGGGAAATACCAAATAAACATCCGAGGT...CACCCGCACTTTCCCGAGCACCGCGCCCCGTGGGCTGTGGGTGAGCCGCGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS GCA 90 bp TCCTCAGCAGCCAGTCTGCCTGGTCCCGCATGCTCTGGATCTTGGTaGGGTGAAGATCCGCTTCCACGTCTCCGTGGTAGTGGAGGCGGT +
Preference number: 5 (lower is better)
Translates to: SSAASLPGPACSGSW*GEDPLPRLRGSGGG
Trigger: ACCGCCTCCACTACCACGGAGACGTGGAAGCGGATCTTCACCGCACCAAGATCCAGAGCATGCGGGACCAGGCAGACTGGCTGCTGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CCA 90 bp CGGGCGGGGGAGGCACGGTGGCCGCCTCGTACTTCAGGAAGCAGGTaGTGGACAGCGTCAGAAACACTGTGGTCGACAGAAACACATCCA +
Preference number: 5 (lower is better)
Translates to: RAGEARWPPRTSGSR*WTASETLWSTETHP
Trigger: TGGATGTGTTTCTGTCGACCACAGTGTTTCTGACGCTGTCCACCACCTGCTTCCTGAAGTACGAGGCGGCCACCGTGCCTCCCCCGCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294016.8
ENST00000574721.1
ENST00000576936.5
CDS CCA 90 bp TGTGGGAGACCGTCCGATGCTGCCATCCACCTGGACGCGGATGTCTaGGGAGATGGACAGCTGGTGCTGTGGGATGACCCTGTGATCCGT +
Preference number: 5 (lower is better)
Translates to: CGRPSDAAIHLDADV*GDGQLVLWDDPVIR
Trigger: ACGGATCACAGGGTCATCCCACAGCACCAGCTGTCCATCTCCCCAGACATCCGCGTCCAGGTGGATGGCAGCATCGGACGGTCTCCCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CCA 90 bp AGCCATAAGCCATGGAGCCAGAAGAGGGAGCTAACGGCTCAGAGCTaGAGACCCAGTCCACGCGGCGCTTACCTGATGGACACCGCGAGG +
Preference number: 5 (lower is better)
Translates to: SHKPWSQKRELTAQS*RPSPRGAYLMDTAR
Trigger: CCTCGCGGTGTCCATCAGGTAAGCGCCGCGTGGACTGGGTCTCCAGCTCTGAGCCGTTAGCTCCCTCTTCTGGCTCCATGGCTTATGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574721.1
CDS CCA 90 bp GGGACAGCTGGCTGGGGACCAGTCCAACCGCTCAGCCATAAGCCATaGAGCCAGAAGAGGGAGCTAACGGCTCAGAGCTGGAGACCCAGT +
Preference number: 5 (lower is better)
Translates to: GTAGWGPVQPLSHKP*SQKRELTAQSWRPS
Trigger: ACTGGGTCTCCAGCTCTGAGCCGTTAGCTCCCTCTTCTGGCTCCATGGCTTATGGCTGAGCGGTTGGACTGGTCCCCAGCCAGCTGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574721.1
CDS-3UTR CAA 90 bp CAGGGGGAGCCCCCGCGGGTGACGTCAGTGTGGATGAAGTCACGGGTGTGGCAGGGTCCTCCAGAAGCCTaGGTGCTGTTTTTATGCTCG +
Preference number: 5 (lower is better)
Translates to: QGEPPRVTSVWMKSRVWQGPPEA*VLFLCS
Trigger: CGAGCATAAAAACAGCACCAAGGCTTCTGGAGGACC...CTGCCACACCCGTGACTTCATCCACACTGACGTCACCCGCGGGGGCTCCCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp TGCAAATGTGCAGGGGGAGCCCCCGCGGGTGACGTCAGTGTGGATGAAGTCACGCGCGGCACCGAACTATaGCACGGGTTCCTCTCGGAA +
Preference number: 5 (lower is better)
Translates to: CKCAGGAPAGDVSVDEVTRGTEL*HGFLSE
Trigger: TTCCGAGAGGAACCCGTGCAATAGTTCGGTGCCGCG...CGTGACTTCATCCACACTGACGTCACCCGCGGGGGCTCCCCCTGCACATTTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp TTGGCCTGCATGCATGTGGGCGAGCCCCTAAACCCGCTCAGTGCAGGGAGCGCGATCTGGCCTTTCCCCTaGACATTCACGGTCCCTCTG +
Preference number: 5 (lower is better)
Translates to: LACMHVGEPLNPLSAGSAIWPFP*TFTVPL
Trigger: CAGAGGGACCGTGAATGTCAAGGGGAAAGGCCAGAT...CGCGCTCCCTGCACTGAGCGGGTTTAGGGGCTCGCCCACATGCATGCAGGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp CGGGCAAGACTGACAAGGAGTGCACCCTGGGCCTCATCAGCGTCCCGGGGTCCCGGGAAGGAAATGGGCTaGATGGGGAAGAAGTGTGTG +
Preference number: 5 (lower is better)
Translates to: RARLTRSAPWASSASRGPGKEMG*MGKKCV
Trigger: CACACACTTCTTCCCCATCAAGCCCATTTCCTTCCC...GGGACCCCGGGACGCTGATGAGGCCCAGGGTGCACTCCTTGTCAGTCTTGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp CTGCCGGCACAGACCCCCGTGGTTCTGAGCTGGACCCCGGCAGGGAGGAGCCCCTTCAATGCTGAAGTATaGCTTCCTGCCCTAAGTTCC +
Preference number: 5 (lower is better)
Translates to: LPAQTPVVLSWTPAGRSPFNAEV*LPALSS
Trigger: GGAACTTAGGGCAGGAAGCAATACTTCAGCATTGAA...GGGGCTCCTCCCTGCCGGGGTCCAGCTCAGAACCACGGGGGTCTGTGCCGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS GCA 90 bp CTGCTCAGCCACGTGGTAGGGGATGATGTTCCTCAGCAGCCAGTCTaGCTGGTCCCGCATGCTCTGGATCTTGGTGCGGTGAAGATCCGC +
Preference number: 5 (lower is better)
Translates to: LLSHVVGDDVPQQPV*LVPHALDLGAVKIR
Trigger: GCGGATCTTCACCGCACCAAGATCCAGAGCATGCGGGACCAGGCAGACTGGCTGCTGAGGAACATCATCCCCTACCACGTGGCTGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS GCA 90 bp AAGGCACCAGGTTGGCAATCTCGTCTGTGGGAGACCGTCCGATGCTaGCATCCACCTGGACGCGGATGTCTGGGGAGATGGACAGCTGGT +
Preference number: 5 (lower is better)
Translates to: KAPGWQSRLWETVRC*HPPGRGCLGRWTAG
Trigger: ACCAGCTGTCCATCTCCCCAGACATCCGCGTCCAGGTGGATGGCAGCATCGGACGGTCTCCCACAGACGAGATTGCCAACCTGGTGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS GCA 90 bp CAGAAGGCACCAGGTTGGCAATCTCGTCTGTGGGAGACCGTCCGATaGTGCCATCCACCTGGACGCGGATGTCTGGGGAGATGGACAGCT +
Preference number: 5 (lower is better)
Translates to: QKAPGWQSRLWETVR*CHPPGRGCLGRWTA
Trigger: AGCTGTCCATCTCCCCAGACATCCGCGTCCAGGTGGATGGCAGCATCGGACGGTCTCCCACAGACGAGATTGCCAACCTGGTGCCTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CCA 90 bp GCGGGGGAGGCACGGTGGCCGCCTCGTACTTCAGGAAGCAGGTGGTaGACAGCGTCAGAAACACTGTGGTCGACAGAAACACATCCAGGA +
Preference number: 5 (lower is better)
Translates to: AGEARWPPRTSGSRW*TASETLWSTETHPG
Trigger: TCCTGGATGTGTTTCTGTCGACCACAGTGTTTCTGACGCTGTCCACCACCTGCTTCCTGAAGTACGAGGCGGCCACCGTGCCTCCCCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294016.8
ENST00000574721.1
ENST00000576936.5
CDS CCA 90 bp TGTTCCTCAGCAGCCAGTCTGCCTGGTCCCGCATGCTCTGGATCTTaGTGCGGTGAAGATCCGCTTCCACGTCTCCGTGGTAGTGGAGGC +
Preference number: 5 (lower is better)
Translates to: CSSAASLPGPACSGS*CGEDPLPRLRGSGG
Trigger: GCCTCCACTACCACGGAGACGTGGAAGCGGATCTTCACCGCACCAAGATCCAGAGCATGCGGGACCAGGCAGACTGGCTGCTGAGGAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CCA 90 bp TACAGCAGCTTGGTGGTGCCGATGACCCCGGCCGTGAGGGGCCCATaGTTGAAGCCGACGCGGAGCTTGAAGTTGAACCACAGCATGTTG +
Preference number: 5 (lower is better)
Translates to: YSSLVVPMTPAVRGP*LKPTRSLKLNHSML
Trigger: CAACATGCTGTGGTTCAACTTCAAGCTCCGCGTCGGCTTCAACCATGGGCCCCTCACGGCCGGGGTCATCGGCACCACCAAGCTGCTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CCA 90 bp TTGGCAATCTCGTCTGTGGGAGACCGTCCGATGCTGCCATCCACCTaGACGCGGATGTCTGGGGAGATGGACAGCTGGTGCTGTGGGATG +
Preference number: 5 (lower is better)
Translates to: LAISSVGDRPMLPST*TRMSGEMDSWCCGM
Trigger: CATCCCACAGCACCAGCTGTCCATCTCCCCAGACATCCGCGTCCAGGTGGATGGCAGCATCGGACGGTCTCCCACAGACGAGATTGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CCA 90 bp TCTTCGGCTTTGACGGGCTCCTTCCACGGTCTCTTGGGGGACAGGTaGGCATCCTTGGCCTGCGTGCTGCTGTCAGAACCCAGAGATGTC +
Preference number: 5 (lower is better)
Translates to: SSALTGSFHGLLGDR*ASLACVLLSEPRDV
Trigger: GACATCTCTGGGTTCTGACAGCAGCACGCAGGCCAAGGATGCCCACCTGTCCCCCAAGAGACCGTGGAAGGAGCCCGTCAAAGCCGAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CCA 90 bp GAGTTCTGGGAAACACTGAGCACACGCCACAGACAGCATGGCCCATaGCGGCCTCGGAGGAAGCTGAAAGGGTCCTGGGTACAGTGCAGG +
Preference number: 5 (lower is better)
Translates to: EFWETLSTRHRQHGP*RPRRKLKGSWVQCR
Trigger: CCTGCACTGTACCCAGGACCCTTTCAGCTTCCTCCGAGGCCGCCATGGGCCATGCTGTCTGTGGCGTGTGCTCAGTGTTTCCCAGAACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574721.1
CDS CCA 90 bp CCACAGGGAGTTCTGGGAAACACTGAGCACACGCCACAGACAGCATaGCCCATGGCGGCCTCGGAGGAAGCTGAAAGGGTCCTGGGTACA +
Preference number: 5 (lower is better)
Translates to: PQGVLGNTEHTPQTA*PMAASEEAERVLGT
Trigger: TGTACCCAGGACCCTTTCAGCTTCCTCCGAGGCCGCCATGGGCCATGCTGTCTGTGGCGTGTGCTCAGTGTTTCCCAGAACTCCCTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574721.1
CDS-3UTR CAA 90 bp CCAGCACGATGTGCTCGCTGCCAACAGACAAGAGATGCACGGCGTTTCCGCTGCGACAGCTGCTTGGGGTaGATCTTGACGCGCACGCTG +
Preference number: 5 (lower is better)
Translates to: PARCARCQQTRDARRFRCDSCLG*ILTRTL
Trigger: CAGCGTGCGCGTCAAGATCAACCCCAAGCAGCTGTC...GCAGCGGAAACGCCGTGCATCTCTTGTCTGTTGGCAGCGAGCACATCGTGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp TTGGGGAGGGCTGAGGAGCCCGTTCTGAGTTTTGGGATTAGGTCCTCCAGAAGCGGTGAGCTTCTCCTCTaGGGGAGGGCTGAGGAGCCC +
Preference number: 5 (lower is better)
Translates to: LGRAEEPVLSFGIRSSRSGELLL*GRAEEP
Trigger: GGGCTCCTCAGCCCTCCCCAAGAGGAGAAGCTCACC...GCTTCTGGAGGACCTAATCCCAAAACTCAGAACGGGCTCCTCAGCCCTCCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000571467.1
CDS GCA 90 bp GGCTCCTTCCACGGTCTCTTGGGGGACAGGTGGGCATCCTTGGCCTaGGTGCTGCTGTCAGAACCCAGAGATGTCTTGTCCACATACTGG +
Preference number: 5 (lower is better)
Translates to: GSFHGLLGDRWASLA*VLLSEPRDVLSTYW
Trigger: CCAGTATGTGGACAAGACATCTCTGGGTTCTGACAGCAGCACGCAGGCCAAGGATGCCCACCTGTCCCCCAAGAGACCGTGGAAGGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CCA 90 bp ATAATGGATTGCCCCACCTTGAGGAAGGTGCTCCTGGACCTCACCTaGGACATGACGAACAGGTGGACCCCGATGGCGTGGATGCAGCCG +
Preference number: 5 (lower is better)
Translates to: IMDCPTLRKVLLDLT*DMTNRWTPMAWMQP
Trigger: CGGCTGCATCCACGCCATCGGGGTCCACCTGTTCGTCATGTCCCAGGTGAGGTCCAGGAGCACCTTCCTCAAGGTGGGGCAATCCATTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CCA 90 bp CCTATCTTCTCACCTTCTCCTTTGCAGTCTCTGAACCTGGAAATCTaGGGACAAGCTGGCAGCGGTTGGGGCTGTGGAGGCACCGCCCCC +
Preference number: 5 (lower is better)
Translates to: PIFSPSPLQSLNLEI*GQAGSGWGCGGTAP
Trigger: GGGGGCGGTGCCTCCACAGCCCCAACCGCTGCCAGCTTGTCCCCAGATTTCCAGGTTCAGAGACTGCAAAGGAGAAGGTGAGAAGATAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574721.1
CDS CCA 90 bp CATCCAAGAGACCACTGCCTGAGGCAAGTGCGTGGAGATGCTGTTTaGCTCCGGTACTCTGAAGAGGCGCCTGCTGTCCCAGGCCCACTA +
Preference number: 5 (lower is better)
Translates to: HPRDHCLRQVRGDAV*LRYSEEAPAVPGPL
Trigger: TAGTGGGCCTGGGACAGCAGGCGCCTCTTCAGAGTACCGGAGCCAAACAGCATCTCCACGCACTTGCCTCAGGCAGTGGTCTCTTGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574721.1
CDS-3UTR CAA 90 bp CCAGCACGATGTGCTCGCTGCCAACAGACAAGAGATGCACGGCGTTTCCGCTGCAACTGCTCGATGGCCTaGATCATGCCCAGGCCCATC +
Preference number: 5 (lower is better)
Translates to: PARCARCQQTRDARRFRCNCSMA*IMPRPI
Trigger: GATGGGCCTGGGCATGATCAAGGCCATCGAGCAGTT...GCAGCGGAAACGCCGTGCATCTCTTGTCTGTTGGCAGCGAGCACATCGTGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp TCCGTTTTCTCCCGGATGTTCTTGAACCTCAGCGGAAGGAGAGCCGACTGGTCCGGTCCTCCAGAAGCCTaGGGTGGATGCGCCAGGAGA +
Preference number: 5 (lower is better)
Translates to: SVFSRMFLNLSGRRADWSGPPEA*GGCARR
Trigger: TCTCCTGGCGCATCCACCCAAGGCTTCTGGAGGACC...GGACCAGTCGGCTCTCCTTCCGCTGAGGTTCAAGAACATCCGGGAGAAAACGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571467.1
CDS TCA 90 bp GAGGTGCTCCTCCCTCGGCGCCGGCTTCAGATTTGGGAGCAAATGTaGTTCCGCACGAAGGGCAGGTCTTTCAACTGGTCAGCAACCACG +
Preference number: 5 (lower is better)
Translates to: EVLLPRRRLQIWEQM*FRTKGRSFNWSATT
Trigger: CGTGGTTGCTGACCAGTTGAAAGACCTGCCCTTCGTGCGGAATCACATTTGCTCCCAAATCTGAAGCCGGCGCCGAGGGAGGAGCACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571467.1
CDS GCA 90 bp CCTTCCACGGTCTCTTGGGGGACAGGTGGGCATCCTTGGCCTGCGTaGTGCTGTCAGAACCCAGAGATGTCTTGTCCACATACTGGACAG +
Preference number: 5 (lower is better)
Translates to: PSTVSWGTGGHPWPA*CCQNPEMSCPHTGQ
Trigger: CTGTCCAGTATGTGGACAAGACATCTCTGGGTTCTGACAGCAGCACGCAGGCCAAGGATGCCCACCTGTCCCCCAAGAGACCGTGGAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS GCA 90 bp GCCAGCATTCCGGCGCCTCACGCCAGACTCAAAGCCATTCATTTCTaGCCTGGGATGTTGGATAAGGGCAGCAGACGCTCAAGGTCAGGG +
Preference number: 5 (lower is better)
Translates to: ASIPAPHARLKAIHF*PGMLDKGSRRSRSG
Trigger: CCCTGACCTTGAGCGTCTGCTGCCCTTATCCAACATCCCAGGGCAGAAATGAATGGCTTTGAGTCTGGCGTGAGGCGCCGGAATGCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574721.1
CDS CCA 90 bp TGTCCACATACTGGACAGAAGGCACCAGGTTGGCAATCTCGTCTGTaGGAGACCGTCCGATGCTGCCATCCACCTGGACGCGGATGTCTG +
Preference number: 5 (lower is better)
Translates to: CPHTGQKAPGWQSRL*ETVRCCHPPGRGCL
Trigger: CAGACATCCGCGTCCAGGTGGATGGCAGCATCGGACGGTCTCCCACAGACGAGATTGCCAACCTGGTGCCTTCTGTCCAGTATGTGGACA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CCA 90 bp ATGACCTGTGTGGAGCAGGAGTGGAGCAGAATGACTGGGAGGCCATaGGCGGCCAGGAGCGCAGTTCAGATGGAGAAACAGGCAACACGT +
Preference number: 5 (lower is better)
Translates to: MTCVEQEWSRMTGRP*AARSAVQMEKQATR
Trigger: ACGTGTTGCCTGTTTCTCCATCTGAACTGCGCTCCTGGCCGCCCATGGCCTCCCAGTCATTCTGCTCCACTCCTGCTCCACACAGGTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574721.1
CDS CCA 90 bp AACGTCTTCACGGGGGAGTTCTTTATGACCTGTGTGGAGCAGGAGTaGAGCAGAATGACTGGGAGGCCATGGGCGGCCAGGAGCGCAGTT +
Preference number: 5 (lower is better)
Translates to: NVFTGEFFMTCVEQE*SRMTGRPWAARSAV
Trigger: AACTGCGCTCCTGGCCGCCCATGGCCTCCCAGTCATTCTGCTCCACTCCTGCTCCACACAGGTCATAAAGAACTCCCCCGTGAAGACGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574721.1
CDS-3UTR CAA 90 bp GAAGGCTCAGGGTGTTTGAAAGACAACGTTAAGCTCTGGGTGAGTCTGCACGGGGGTGAGCTTCTCCTCTaGGGGAGGGCTGAGGAGCCC +
Preference number: 5 (lower is better)
Translates to: EGSGCLKDNVKLWVSLHGGELLL*GRAEEP
Trigger: GGGCTCCTCAGCCCTCCCCAAGAGGAGAAGCTCACC...CCCGTGCAGACTCACCCAGAGCTTAACGTTGTCTTTCAAACACCCTGAGCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp AGCAAGGTCGTGAGCAAACGCCCAGCCCCTCAAAGCTACACAGCCTGGAGGGGAAAGCCGACGCGGAGCTaGAAGTTGAACCACAGCATG +
Preference number: 5 (lower is better)
Translates to: SKVVSKRPAPQSYTAWRGKPTRS*KLNHSM
Trigger: CATGCTGTGGTTCAACTTCAAGCTCCGCGTCGGCTT...TCCCCTCCAGGCTGTGTAGCTTTGAGGGGCTGGGCGTTTGCTCACGACCTTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp CCAGCACGATGTGCTCGCTGCCAACAGACAAGAGATGCACGGCGTTTCCGCTGCACAGAAGGCACCAGGTaGGCAATCTCGTCTGTGGGA +
Preference number: 5 (lower is better)
Translates to: PARCARCQQTRDARRFRCTEGTR*AISSVG
Trigger: TCCCACAGACGAGATTGCCAACCTGGTGCCTTCTGT...GCAGCGGAAACGCCGTGCATCTCTTGTCTGTTGGCAGCGAGCACATCGTGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp TGCACAGGGACAACGGGCAAGACTGACAAGGAGTGCACCCTGGGCCTCATCAGCGGGCAACTGTGGCGCTaGGAAAGCACAACAGCCAAA +
Preference number: 5 (lower is better)
Translates to: CTGTTGKTDKECTLGLISGQLWR*ESTTAK
Trigger: TTTGGCTGTTGTGCTTTCCAAGCGCCACAGTTGCCC...GCTGATGAGGCCCAGGGTGCACTCCTTGTCAGTCTTGCCCGTTGTCCCTGTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp GACAACGTTAAGCTCTGGGTGAGTCTGCACGGGGCTGAACCAGACTCCACTTTGGTGCCCGGCTGGCATTaGCTGTCTTGGCCTGCATGC +
Preference number: 5 (lower is better)
Translates to: DNVKLWVSLHGAEPDSTLVPGWH*LSWPAC
Trigger: GCATGCAGGCCAAGACAGCAAATGCCAGCCGGGCAC...CAAAGTGGAGTCTGGTTCAGCCCCGTGCAGACTCACCCAGAGCTTAACGTTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp CAGGGGGAGCCCCCGCGGGTGACGTCAGTGTGGATGAAGTCACGGGTGTGGCAGGAATCACAAACACCTTaGTGGTTGGGGAAGGAAATG +
Preference number: 5 (lower is better)
Translates to: QGEPPRVTSVWMKSRVWQESQTP*WLGKEM
Trigger: CATTTCCTTCCCCAACCACAAAGGTGTTTGTGATTC...CTGCCACACCCGTGACTTCATCCACACTGACGTCACCCGCGGGGGCTCCCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS TCA 90 bp AGAAGCCCACACACACCAGGAGGAAGCACAGCGCGGGGGCGACCATaGCGATCAGTCTGGATCTCATGTGGACCGCAAAATAGATGCTCC +
Preference number: 5 (lower is better)
Translates to: RSPHTPGGSTARGRP*RSVWISCGPQNRCS
Trigger: GGAGCATCTATTTTGCGGTCCACATGAGATCCAGACTGATCGTCATGGTCGCCCCCGCGCTGTGCTTCCTCCTGGTGTGTGTGGGCTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS TCA 90 bp CCTGGACGCGGATGTCTGGGGAGATGGACAGCTGGTGCTGTGGGATaGCCCTGTGATCCGTGCACTTTGGGTACAGGTAGGTCTTCATCT +
Preference number: 5 (lower is better)
Translates to: PGRGCLGRWTAGAVG*PCDPCTLGTGRSSS
Trigger: AGATGAAGACCTACCTGTACCCAAAGTGCACGGATCACAGGGTCATCCCACAGCACCAGCTGTCCATCTCCCCAGACATCCGCGTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS GCA 90 bp TCCACGGTCTCTTGGGGGACAGGTGGGCATCCTTGGCCTGCGTGCTaGTGTCAGAACCCAGAGATGTCTTGTCCACATACTGGACAGAAG +
Preference number: 5 (lower is better)
Translates to: STVSWGTGGHPWPAC*CQNPEMSCPHTGQK
Trigger: CTTCTGTCCAGTATGTGGACAAGACATCTCTGGGTTCTGACAGCAGCACGCAGGCCAAGGATGCCCACCTGTCCCCCAAGAGACCGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CCA 90 bp CGGTCGAAGCGACCGAACAGATCGTTCAGGAGACCCACCAGGGCGTaGGCAGACTTGTTGGCACTCATCTTGGTGAAGCCCACGATATCT +
Preference number: 5 (lower is better)
Translates to: RSKRPNRSFRRPTRA*ADLLALILVKPTIS
Trigger: AGATATCGTGGGCTTCACCAAGATGAGTGCCAACAAGTCTGCCCACGCCCTGGTGGGTCTCCTGAACGATCTGTTCGGTCGCTTCGACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CCA 90 bp ATCCACCTGGACGCGGATGTCTGGGGAGATGGACAGCTGGTGCTGTaGGATGACCCTGTGATCCGTGCACTTTGGGTACAGGTAGGTCTT +
Preference number: 5 (lower is better)
Translates to: IHLDADVWGDGQLVL*DDPVIRALWVQVGL
Trigger: AAGACCTACCTGTACCCAAAGTGCACGGATCACAGGGTCATCCCACAGCACCAGCTGTCCATCTCCCCAGACATCCGCGTCCAGGTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp ATGGCAAAACATAATCAGACAGGACCAGCAGCCAACTGCCCGGACGGAGCTCCCTTGGAGGACAGCTGCTaGGGGTTGATCTTGACGCGC +
Preference number: 5 (lower is better)
Translates to: MAKHNQTGPAANCPDGAPLEDSC*GLILTR
Trigger: GCGCGTCAAGATCAACCCCAAGCAGCTGTCCTCCAA...GGGAGCTCCGTCCGGGCAGTTGGCTGCTGGTCCTGTCTGATTATGTTTTGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp AGCAAGGTCGTGAGCAAACGCCCAGCCCCTCAAAGCTACACAGCCTGGAGGGGAGAGGTGGCATGCCTCTaGACAGAATTCTCACTCTCC +
Preference number: 5 (lower is better)
Translates to: SKVVSKRPAPQSYTAWRGEVACL*TEFSLS
Trigger: GGAGAGTGAGAATTCTGTCAAGAGGCATGCCACCTC...TCCCCTCCAGGCTGTGTAGCTTTGAGGGGCTGGGCGTTTGCTCACGACCTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp ATGGCAAAACATAATCAGACAGGACCAGCAGCCAACTGCCCGGACGGAGCTCCCAGGGCGTGGGCAGACTaGTTGGCACTCATCTTGGTG +
Preference number: 5 (lower is better)
Translates to: MAKHNQTGPAANCPDGAPRAWAD*LALILV
Trigger: CACCAAGATGAGTGCCAACAAGTCTGCCCACGCCCT...GGGAGCTCCGTCCGGGCAGTTGGCTGCTGGTCCTGTCTGATTATGTTTTGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp TTGGCCTGCATGCATGTGGGCGAGCCCCTAAACCCGCTCAGTGCAGGGAGCGCGGGTCATCTAAGTATTTaGCGGTGGCCTCAGAAATGT +
Preference number: 5 (lower is better)
Translates to: LACMHVGEPLNPLSAGSAGHLSI*RWPQKC
Trigger: ACATTTCTGAGGCCACCGCAAAATACTTAGATGACC...CGCGCTCCCTGCACTGAGCGGGTTTAGGGGCTCGCCCACATGCATGCAGGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS TCA 90 bp CGTCTTTCTCTATGGCTTTGCCAAATCGACCCCTTTCTTCGGCTTTaGCGGGCTCCTTCCACGGTCTCTTGGGGGACAGGTGGGCATCCT +
Preference number: 5 (lower is better)
Translates to: RLSLWLCQIDPFLRL*RAPSTVSWGTGGHP
Trigger: AGGATGCCCACCTGTCCCCCAAGAGACCGTGGAAGGAGCCCGTCAAAGCCGAAGAAAGGGGTCGATTTGGCAAAGCCATAGAGAAAGACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS TCA 90 bp ACAGAGCACCTCGGGCAGCGGGTGGGCGCCGCCTCACACACTCTTTaGAACGTTGAGCTTGGTGAGTTCGTTGGCTTCTTCTATTCCTGT +
Preference number: 5 (lower is better)
Translates to: TEHLGQRVGAASHTL*NVELGEFVGFFYSC
Trigger: ACAGGAATAGAAGAAGCCAACGAACTCACCAAGCTCAACGTTTCAAAGAGTGTGTGAGGCGGCGCCCACCCGCTGCCCGAGGTGCTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS GCA 90 bp ACCCCGACTCTCATGTTCACCATCTCCTTCTTCTCCTGGCAGAACTaGTCGATGGCCTTGATCATGCCCAGGCCCATCTCGATGCAGCAG +
Preference number: 5 (lower is better)
Translates to: TPTLMFTISFFSWQN*SMALIMPRPISMQQ
Trigger: CTGCTGCATCGAGATGGGCCTGGGCATGATCAAGGCCATCGAGCAGTTCTGCCAGGAGAAGAAGGAGATGGTGAACATGAGAGTCGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS GCA 90 bp CTTGAACCTCAGCGGAAGGAGAGCCGACTGGTCCAGGCTCACCCCTaGCCACCTTCCCTTCTCCTGCAAGATCTTGGTGCTGTTTTTATG +
Preference number: 5 (lower is better)
Translates to: LEPQRKESRLVQAHP*PPSLLLQDLGAVFM
Trigger: CATAAAAACAGCACCAAGATCTTGCAGGAGAAGGGAAGGTGGGCAGGGGTGAGCCTGGACCAGTCGGCTCTCCTTCCGCTGAGGTTCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571889.1
CDS CCA 90 bp GCCTGCGTGCTGCTGTCAGAACCCAGAGATGTCTTGTCCACATACTaGACAGAAGGCACCAGGTTGGCAATCTCGTCTGTGGGAGACCGT +
Preference number: 5 (lower is better)
Translates to: ACVLLSEPRDVLSTY*TEGTRLAISSVGDR
Trigger: ACGGTCTCCCACAGACGAGATTGCCAACCTGGTGCCTTCTGTCCAGTATGTGGACAAGACATCTCTGGGTTCTGACAGCAGCACGCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CCA 90 bp GGAGTTCTTTATGACCTGTGTGGAGCAGGAGTGGAGCAGAATGACTaGGAGGCCATGGGCGGCCAGGAGCGCAGTTCAGATGGAGAAACA +
Preference number: 5 (lower is better)
Translates to: GVLYDLCGAGVEQND*EAMGGQERSSDGET
Trigger: TGTTTCTCCATCTGAACTGCGCTCCTGGCCGCCCATGGCCTCCCAGTCATTCTGCTCCACTCCTGCTCCACACAGGTCATAAAGAACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574721.1
CDS-3UTR CAA 90 bp TGCCGTCAGCAGCCCTCGTGCCAGCTGCTTAGAAACTCGTGTCTCCAGCACGATAGCTGCTCCATGAGATaGGCCAGGTTCACATCGTTG +
Preference number: 5 (lower is better)
Translates to: CRQQPSCQLLRNSCLQHDSCSMR*ARFTSL
Trigger: CAACGATGTGAACCTGGCCAATCTCATGGAGCAGCT...ATCGTGCTGGAGACACGAGTTTCTAAGCAGCTGGCACGAGGGCTGCTGACGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp CGTGGGTGGCAGGGGCAGCTGGTGGGCTTCTCCTATTCCCCTAGCCTCAGAATTGTTTTTATGCTCGTCTaGGCAGCCGTTTTGAGGTGC +
Preference number: 5 (lower is better)
Translates to: RGWQGQLVGFSYSPSLRIVFMLV*AAVLRC
Trigger: GCACCTCAAAACGGCTGCCAAGACGAGCATAAAAAC...AATTCTGAGGCTAGGGGAATAGGAGAAGCCCACCAGCTGCCCCTGCCACCCACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp TGCAAATGTGCAGGGGGAGCCCCCGCGGGTGACGTCAGTGTGGATGAAGTCACGACTGGGAAGTGTATGTaGGTCTCATATTCGGAGGTG +
Preference number: 5 (lower is better)
Translates to: CKCAGGAPAGDVSVDEVTTGKCM*VSYSEV
Trigger: CACCTCCGAATATGAGACCAACATACACTTCCCAGT...CGTGACTTCATCCACACTGACGTCACCCGCGGGGGCTCCCCCTGCACATTTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp GAAGGCTCAGGGTGTTTGAAAGACAACGTTAAGCTCTGGGTGAGTCTGCACGGGTGCACTGGCCATGCTTaGAGGTCCCACTCAGACCCC +
Preference number: 5 (lower is better)
Translates to: EGSGCLKDNVKLWVSLHGCTGHA*RSHSDP
Trigger: GGGGTCTGAGTGGGACCTCAAAGCATGGCCAGTGCA...CCCGTGCAGACTCACCCAGAGCTTAACGTTGTCTTTCAAACACCCTGAGCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp TCATCAGCGTCCCGGGGTCCCCTGAAAGACTGGCTACAACTCCGACCGGACAACCAAACACCTTTGTGGTaGGGGAAGGAAATGGGCTTG +
Preference number: 5 (lower is better)
Translates to: SSASRGPLKDWLQLRPDNQTPLW*GKEMGL
Trigger: CAAGCCCATTTCCTTCCCCAACCACAAAGGTGTTTG...GTTGTCCGGTCGGAGTTGTAGCCAGTCTTTCAGGGGACCCCGGGACGCTGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS TCA 90 bp CCAGAAGCCTTGGTGCTGTTTTTATGCTCGTCTTGGCAGCCGTTTTaGGGTGCTCCTCCCTCGGCGCCGGCTTCAGATTTGGGAGCAAAT +
Preference number: 5 (lower is better)
Translates to: PEALVLFLCSSWQPF*GAPPSAPASDLGAN
Trigger: ATTTGCTCCCAAATCTGAAGCCGGCGCCGAGGGAGGAGCACCTCAAAACGGCTGCCAAGACGAGCATAAAAACAGCACCAAGGCTTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CCA 90 bp AACCCAGAGATGTCTTGTCCACATACTGGACAGAAGGCACCAGGTTaGCAATCTCGTCTGTGGGAGACCGTCCGATGCTGCCATCCACCT +
Preference number: 5 (lower is better)
Translates to: NPEMSCPHTGQKAPG*QSRLWETVRCCHPP
Trigger: AGGTGGATGGCAGCATCGGACGGTCTCCCACAGACGAGATTGCCAACCTGGTGCCTTCTGTCCAGTATGTGGACAAGACATCTCTGGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp CGAGACAGCAAGGTCGTGAGCAAACGCCCAGCCCCTCAAAGCTACACAGCCTGGGAACCCAGAGATGTCTaGTCCACATACTGGACAGAA +
Preference number: 5 (lower is better)
Translates to: RDSKVVSKRPAPQSYTAWEPRDV*STYWTE
Trigger: TTCTGTCCAGTATGTGGACAAGACATCTCTGGGTTC...CCAGGCTGTGTAGCTTTGAGGGGCTGGGCGTTTGCTCACGACCTTGCTGTCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp TGCAAATGTGCAGGGGGAGCCCCCGCGGGTGACGTCAGTGTGGATGAAGTCACGTCTTTCTCTATGGCTTaGCCAAATCGACCCCTTTCT +
Preference number: 5 (lower is better)
Translates to: CKCAGGAPAGDVSVDEVTSFSMA*PNRPLS
Trigger: AGAAAGGGGTCGATTTGGCAAAGCCATAGAGAAAGA...CGTGACTTCATCCACACTGACGTCACCCGCGGGGGCTCCCCCTGCACATTTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp CGAGACAGCAAGGTCGTGAGCAAACGCCCAGCCCCTCAAAGCTACACAGCCTGGACCCTTTCTTCGGTATaGGAAGACCAGCAAACTGAC +
Preference number: 5 (lower is better)
Translates to: RDSKVVSKRPAPQSYTAWTLSSV*EDQQTD
Trigger: GTCAGTTTGCTGGTCTTCCAATACCGAAGAAAGGGT...CCAGGCTGTGTAGCTTTGAGGGGCTGGGCGTTTGCTCACGACCTTGCTGTCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp CGTGGGTGGCAGGGGCAGCTGGTGGGCTTCTCCTATTCCCCTAGCCTCAGAATTGAAGGCTCAGGGTGTTaGAAAGACAACGTTAAGCTC +
Preference number: 5 (lower is better)
Translates to: RGWQGQLVGFSYSPSLRIEGSGC*KDNVKL
Trigger: GAGCTTAACGTTGTCTTTCAAACACCCTGAGCCTTC...AATTCTGAGGCTAGGGGAATAGGAGAAGCCCACCAGCTGCCCCTGCCACCCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp CCGGATGTTCTTGAACCTCAGCGGAAGGAGAGCCGACTGGTCCAGGCTCACCCCCATGAGCTTGTTACCTaGGTGCTGTTTTTATGCTCG +
Preference number: 5 (lower is better)
Translates to: PDVLEPQRKESRLVQAHPHELVT*VLFLCS
Trigger: CGAGCATAAAAACAGCACCAAGGTAACAAGCTCATG...GGGGTGAGCCTGGACCAGTCGGCTCTCCTTCCGCTGAGGTTCAAGAACATCCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000571467.1
CDS TCA 90 bp GGTGAAGATCCGCTTCCACGTCTCCGTGGTAGTGGAGGCGGTAGCTaGCTTCAAATTCGCGATTCAGGAACCAGACCAACAAGAGCAGGA +
Preference number: 5 (lower is better)
Translates to: GEDPLPRLRGSGGGS*LQIRDSGTRPTRAG
Trigger: TCCTGCTCTTGTTGGTCTGGTTCCTGAATCGCGAATTTGAAGTCAGCTACCGCCTCCACTACCACGGAGACGTGGAAGCGGATCTTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS TCA 90 bp TCATCAGGCTTGGTGCTGTTTTTATGCTCGTCTTGGCAGCCGTTTTaGGGTGCTCCTCCCTCGGCGCCGGCTTCAGATTTGGGAGCAAAT +
Preference number: 5 (lower is better)
Translates to: SSGLVLFLCSSWQPF*GAPPSAPASDLGAN
Trigger: ATTTGCTCCCAAATCTGAAGCCGGCGCCGAGGGAGGAGCACCTCAAAACGGCTGCCAAGACGAGCATAAAAACAGCACCAAGCCTGATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575550.5
CDS GCA 90 bp CCGCACGAAGGGCAGGTCTTAAGGTTATCAAAGGTTTTGACAGTCTaGGCCAAGTCACTGACATTCCCTGATGACGCTGTCCCCTGTCCC +
Preference number: 5 (lower is better)
Translates to: PHEGQVLRLSKVLTV*AKSLTFPDDAVPCP
Trigger: GGGACAGGGGACAGCGTCATCAGGGAATGTCAGTGACTTGGCGCAGACTGTCAAAACCTTTGATAACCTTAAGACCTGCCCTTCGTGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294016.8
ENST00000571889.1
ENST00000572288.1
ENST00000575550.5
CDS CCA 90 bp GATGGACAGCTGGTGCTGTGGGATGACCCTGTGATCCGTGCACTTTaGGTACAGGTAGGTCTTCATCTGGCCTTTCCCCTTGACATTCAC +
Preference number: 5 (lower is better)
Translates to: DGQLVLWDDPVIRAL*VQVGLHLAFPLDIH
Trigger: GTGAATGTCAAGGGGAAAGGCCAGATGAAGACCTACCTGTACCCAAAGTGCACGGATCACAGGGTCATCCCACAGCACCAGCTGTCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CCA 90 bp TTCCGCACGAAGGGCAGGTCTTTCAACTGGTCAGCAACCACGCTCTaGCCCAGCCGTTCAATAACTTTCCCATCTTCCATTTCGTACCGG +
Preference number: 5 (lower is better)
Translates to: FRTKGRSFNWSATTL*PSRSITFPSSISYR
Trigger: CCGGTACGAAATGGAAGATGGGAAAGTTATTGAACGGCTGGGCCAGAGCGTGGTTGCTGACCAGTTGAAAGACCTGCCCTTCGTGCGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571467.1
CDS-3UTR CAA 90 bp GAAGGCTCAGGGTGTTTGAAAGACAACGTTAAGCTCTGGGTGAGTCTGCACGGGCCCGTGCATAATGGATaGCCCCACCTTGAGGAAGGT +
Preference number: 5 (lower is better)
Translates to: EGSGCLKDNVKLWVSLHGPVHNG*PHLEEG
Trigger: ACCTTCCTCAAGGTGGGGCAATCCATTATGCACGGG...CCCGTGCAGACTCACCCAGAGCTTAACGTTGTCTTTCAAACACCCTGAGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp CTTTGCGGAGCATGTTCTGAGCGAGACAGCAAGGTCGTGAGCAAACGCCCAGCCTTGTTGGCACTCATCTaGGTGAAGCCCACGATATCT +
Preference number: 5 (lower is better)
Translates to: LCGACSERDSKVVSKRPALLALI*VKPTIS
Trigger: AGATATCGTGGGCTTCACCAAGATGAGTGCCAACAA...GGCTGGGCGTTTGCTCACGACCTTGCTGTCTCGCTCAGAACATGCTCCGCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp CGAGACAGCAAGGTCGTGAGCAAACGCCCAGCCCCTCAAAGCTACACAGCCTGGAGGTTATCAAAGGTTTaGACAGTCTGCGCCAAGTCA +
Preference number: 5 (lower is better)
Translates to: RDSKVVSKRPAPQSYTAWRLSKV*TVCAKS
Trigger: TGACTTGGCGCAGACTGTCAAAACCTTTGATAACCT...CCAGGCTGTGTAGCTTTGAGGGGCTGGGCGTTTGCTCACGACCTTGCTGTCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp GTGGCCAAAACACAAAAGAGACATCTGGTTACCTTCCTGGGAACTGCCCTCCCCGCGCCGGCTTCAGATTaGGGAGCAAATGTGATTCCG +
Preference number: 5 (lower is better)
Translates to: VAKTQKRHLVTFLGTALPAPASD*GANVIP
Trigger: CGGAATCACATTTGCTCCCAAATCTGAAGCCGGCGC...GGGGAGGGCAGTTCCCAGGAAGGTAACCAGATGTCTCTTTTGTGTTTTGGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp AACCTCGGATGTTTATTTGGTATTTCCCTCTCCGATGAGTCAGCTTCCAGGACCGTCTTGGCAGCCGTTTaGAGGTGCTCCTCCCTCGGC +
Preference number: 5 (lower is better)
Translates to: NLGCLFGISLSDESASRTVLAAV*RCSSLG
Trigger: GCCGAGGGAGGAGCACCTCAAAACGGCTGCCAAGAC...GGTCCTGGAAGCTGACTCATCGGAGAGGGAAATACCAAATAAACATCCGAGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp TTGGGGAGGGCTGAGGAGCCCGTTCTGAGTTTTGGGATTAGGTCCTCCAGAAGCGTTTTTATGCTCGTCTaGGCAGCCGTTTTGAGGTGC +
Preference number: 5 (lower is better)
Translates to: LGRAEEPVLSFGIRSSRSVFMLV*AAVLRC
Trigger: GCACCTCAAAACGGCTGCCAAGACGAGCATAAAAAC...GCTTCTGGAGGACCTAATCCCAAAACTCAGAACGGGCTCCTCAGCCCTCCCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000571467.1
CDS-3UTR CAA 90 bp GACAACGTTAAGCTCTGGGTGAGTCTGCACGGGGCTGAACCAGACTCCACTTTGTTCTCCCGGATGTTCTaGAACCTCAGCGGAAGGAGA +
Preference number: 5 (lower is better)
Translates to: DNVKLWVSLHGAEPDSTLFSRMF*NLSGRR
Trigger: TCTCCTTCCGCTGAGGTTCAAGAACATCCGGGAGAA...CAAAGTGGAGTCTGGTTCAGCCCCGTGCAGACTCACCCAGAGCTTAACGTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp TCCCGGATGTTCTTGAACCTCAGCGGAAGGAGAGCCGACTGGTCCAGGCTCACCATCAGGCTGTCTTCTTaGATAACGTCCACAAAGTGG +
Preference number: 5 (lower is better)
Translates to: SRMFLNLSGRRADWSRLTIRLSS*ITSTKW
Trigger: CCACTTTGTGGACGTTATCAAAGAAGACAGCCTGAT...GGTGAGCCTGGACCAGTCGGCTCTCCTTCCGCTGAGGTTCAAGAACATCCGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571467.1
CDS TCA 90 bp CCGTGCACTTTGGGTACAGGTAGGTCTTCATCTGGCCTTTCCCCTTaGCATTCACGGTCCCTCTGTAGTCGAAGTCATAGCCCATCTTGC +
Preference number: 5 (lower is better)
Translates to: PCTLGTGRSSSGLSP*HSRSLCSRSHSPSC
Trigger: GCAAGATGGGCTATGACTTCGACTACAGAGGGACCGTGAATGTCAAGGGGAAAGGCCAGATGAAGACCTACCTGTACCCAAAGTGCACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS TCA 90 bp CTTGTTACCTTGGTGCTGTTTTTATGCTCGTCTTGGCAGCCGTTTTaGGGTGCTCCTCCCTCGGCGCCGGCTTCAGATTTGGGAGCAAAT +
Preference number: 5 (lower is better)
Translates to: LVTLVLFLCSSWQPF*GAPPSAPASDLGAN
Trigger: ATTTGCTCCCAAATCTGAAGCCGGCGCCGAGGGAGGAGCACCTCAAAACGGCTGCCAAGACGAGCATAAAAACAGCACCAAGGTAACAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571467.1
ENST00000572288.1
CDS TCA 90 bp GAAAGCAAGGCCTCTGCACAGCTGCAGCGAGACTCCTTGGCTCTCTaGCCCGATATCAGGTATGTCTTCAAACCGAAGGTTAGGATCTGG +
Preference number: 5 (lower is better)
Translates to: ESKASAQLQRDSLAL*PDIRYVFKPKVRIW
Trigger: CCAGATCCTAACCTTCGGTTTGAAGACATACCTGATATCGGGTCAGAGAGCCAAGGAGTCTCGCTGCAGCTGTGCAGAGGCCTTGCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575550.5
CDS TCA 90 bp GAAAGCAAGGCCTCTGCACAGCTGCAGCGAGACTCCTTGGCTCTCTaGCCCGATATCAGGTATGTCTTCAAACCAGCGACACGCTACATA +
Preference number: 5 (lower is better)
Translates to: ESKASAQLQRDSLAL*PDIRYVFKPATRYI
Trigger: TATGTAGCGTGTCGCTGGTTTGAAGACATACCTGATATCGGGTCAGAGAGCCAAGGAGTCTCGCTGCAGCTGTGCAGAGGCCTTGCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571889.1
CDS TCA 90 bp TGCAAGATCTTGGTGCTGTTTTTATGCTCGTCTTGGCAGCCGTTTTaGGGTGCTCCTCCCTCGGCGCCGGCTTCAGATTTGGGAGCAAAT +
Preference number: 5 (lower is better)
Translates to: CKILVLFLCSSWQPF*GAPPSAPASDLGAN
Trigger: ATTTGCTCCCAAATCTGAAGCCGGCGCCGAGGGAGGAGCACCTCAAAACGGCTGCCAAGACGAGCATAAAAACAGCACCAAGATCTTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571889.1
CDS CCA 90 bp CAAATATTACTGTGTTTCGACAAACAGAGCACCTCGGGCAGCGGGTaGGCGCCGCCTCACACACTCTTTGAAACGTTGAGCTTGGTGAGT +
Preference number: 5 (lower is better)
Translates to: QILLCFDKQSTSGSG*APPHTLFETLSLVS
Trigger: ACTCACCAAGCTCAACGTTTCAAAGAGTGTGTGAGGCGGCGCCCACCCGCTGCCCGAGGTGCTCTGTTTGTCGAAACACAGTAATATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp ATAACGTCCACAAAGTGGGCGTCCGTTTTCTCCCGGATGTTCTTGAACCTCAGCGCGCCGGCTTCAGATTaGGGAGCAAATGTGATTCCG +
Preference number: 5 (lower is better)
Translates to: ITSTKWASVFSRMFLNLSAPASD*GANVIP
Trigger: CGGAATCACATTTGCTCCCAAATCTGAAGCCGGCGC...GCTGAGGTTCAAGAACATCCGGGAGAAAACGGACGCCCACTTTGTGGACGTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571467.1
CDS-3UTR CAA 90 bp TGCCGTCAGCAGCCCTCGTGCCAGCTGCTTAGAAACTCGTGTCTCCAGCACGATTTTGAAACGTTGAGCTaGGTGAGTTCGTTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: CRQQPSCQLLRNSCLQHDFETLS*VSSLAS
Trigger: AGAAGCCAACGAACTCACCAAGCTCAACGTTTCAAA...ATCGTGCTGGAGACACGAGTTTCTAAGCAGCTGGCACGAGGGCTGCTGACGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp CTTTGCGGAGCATGTTCTGAGCGAGACAGCAAGGTCGTGAGCAAACGCCCAGCCACACTCTTTGAAACGTaGAGCTTGGTGAGTTCGTTG +
Preference number: 5 (lower is better)
Translates to: LCGACSERDSKVVSKRPATLFET*SLVSSL
Trigger: CAACGAACTCACCAAGCTCAACGTTTCAAAGAGTGT...GGCTGGGCGTTTGCTCACGACCTTGCTGTCTCGCTCAGAACATGCTCCGCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp TCCCTCTCCGATGAGTCAGCTTCCAGGACCAACACCTCCACTCCCGATGGGGAGTTTCAGAGCTGGAATTaGCTCCCCAGATTAAATCCT +
Preference number: 5 (lower is better)
Translates to: SLSDESASRTNTSTPDGEFQSWN*LPRLNP
Trigger: AGGATTTAATCTGGGGAGCAAATTCCAGCTCTGAAA...CTCCCCATCGGGAGTGGAGGTGTTGGTCCTGGAAGCTGACTCATCGGAGAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp GTGGGCGTCCGTTTTCTCCCGGATGTTCTTGAACCTCAGCGGAAGGAGAGCCGAACAACAGCCATGAGCTaGTTACCTTGGTGCTGTTTT +
Preference number: 5 (lower is better)
Translates to: VGVRFLPDVLEPQRKESRTTAMS*LPWCCF
Trigger: AAAACAGCACCAAGGTAACAAGCTCATGGCTGTTGT...TCGGCTCTCCTTCCGCTGAGGTTCAAGAACATCCGGGAGAAAACGGACGCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571467.1
CDS TCA 90 bp ATTTCGTACCGGTCATCTAAGTATTTTGCGGTGGCCTCAGAAATGTaGACTTTGCCGGCCACTCCCAGCTGCTCCATGAGATTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: ISYRSSKYFAVASEM*TLPATPSCSMRLAR
Trigger: CCTGGCCAATCTCATGGAGCAGCTGGGAGTGGCCGGCAAAGTTCACATTTCTGAGGCCACCGCAAAATACTTAGATGACCGGTACGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294016.8
ENST00000571467.1
ENST00000572288.1
CDS TCA 90 bp GAAAGCAAGGCCTCTGCACAGCTGCAGCGAGACTCCTTGGCTCTCTaGCCCGATATCAGGTATGTCTTCAAACCTTTCAACTGGTCAGCA +
Preference number: 5 (lower is better)
Translates to: ESKASAQLQRDSLAL*PDIRYVFKPFNWSA
Trigger: TGCTGACCAGTTGAAAGGTTTGAAGACATACCTGATATCGGGTCAGAGAGCCAAGGAGTCTCGCTGCAGCTGTGCAGAGGCCTTGCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294016.8
ENST00000572288.1
CDS TCA 90 bp GTCTATTCTTTCTTCTGTTGGCGTCACATCCAAGAGACCACTGCCTaGGGCAAGTGCGTGGAGATGCTGTTTGGCTCCGGTACTCTGAAG +
Preference number: 5 (lower is better)
Translates to: VYSFFCWRHIQETTA*GKCVEMLFGSGTLK
Trigger: CTTCAGAGTACCGGAGCCAAACAGCATCTCCACGCACTTGCCTCAGGCAGTGGTCTCTTGGATGTGACGCCAACAGAAGAAAGAATAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574721.1
CDS GCA 90 bp GCTTGTCTATTCTTTCTTCTGTTGGCGTCACATCCAAGAGACCACTaGCTGAGGCAAGTGCGTGGAGATGCTGTTTGGCTCCGGTACTCT +
Preference number: 5 (lower is better)
Translates to: ACLFFLLLASHPRDH*LRQVRGDAVWLRYS
Trigger: AGAGTACCGGAGCCAAACAGCATCTCCACGCACTTGCCTCAGGCAGTGGTCTCTTGGATGTGACGCCAACAGAAGAAAGAATAGACAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574721.1
CDS-3UTR CAA 90 bp GTCCTCCAGAAGCCTTGGGTGGATGCGCCAGGAGAGGAACTGACAGGAACAACAGGTCATCTAAGTATTTaGCGGTGGCCTCAGAAATGT +
Preference number: 5 (lower is better)
Translates to: VLQKPWVDAPGEELTGTTGHLSI*RWPQKC
Trigger: ACATTTCTGAGGCCACCGCAAAATACTTAGATGACC...TGTTGTTCCTGTCAGTTCCTCTCCTGGCGCATCCACCCAAGGCTTCTGGAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571467.1
CDS-3UTR CAA 90 bp ATGGCAAAACATAATCAGACAGGACCAGCAGCCAACTGCCCGGACGGAGCTCCCAGCTTGGTGAGTTCGTaGGCTTCTTCTATTCCTGTT +
Preference number: 5 (lower is better)
Translates to: MAKHNQTGPAANCPDGAPSLVSS*ASSIPV
Trigger: AACAGGAATAGAAGAAGCCAACGAACTCACCAAGCT...GGGAGCTCCGTCCGGGCAGTTGGCTGCTGGTCCTGTCTGATTATGTTTTGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp GACAACGTTAAGCTCTGGGTGAGTCTGCACGGGGCTGAACCAGACTCCACTTTGATCAGGCTGTCTTCTTaGATAACGTCCACAAAGTGG +
Preference number: 5 (lower is better)
Translates to: DNVKLWVSLHGAEPDSTLIRLSS*ITSTKW
Trigger: CCACTTTGTGGACGTTATCAAAGAAGACAGCCTGAT...CAAAGTGGAGTCTGGTTCAGCCCCGTGCAGACTCACCCAGAGCTTAACGTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp TCATCAGCGTCCCGGGGTCCCCTGAAAGACTGGCTACAACTCCGACCGGACAACGCAAACAGTCGGTTCTaGCTAATTCAATTTCAGATT +
Preference number: 5 (lower is better)
Translates to: SSASRGPLKDWLQLRPDNANSRF*LIQFQI
Trigger: AATCTGAAATTGAATTAGCAAGAACCGACTGTTTGC...GTTGTCCGGTCGGAGTTGTAGCCAGTCTTTCAGGGGACCCCGGGACGCTGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp AAAGCACAACAGCCAAATACAAATATTACTGTGTTTCGACAAACAGAGCACCTCAGGGAAGTTCAGACCTaGAGCGCTCCCAGCCCCGCG +
Preference number: 5 (lower is better)
Translates to: KAQQPNTNITVFRQTEHLREVQT*SAPSPA
Trigger: CGCGGGGCTGGGAGCGCTCAAGGTCTGAACTTCCCT...GAGGTGCTCTGTTTGTCGAAACACAGTAATATTTGTATTTGGCTGTTGTGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp GGAGAGGAACTGACAGGAACAACAGCCATGAGCTTGTTACCTTGGTGCTGTTTTAGCTGCTCCATGAGATaGGCCAGGTTCACATCGTTG +
Preference number: 5 (lower is better)
Translates to: GEELTGTTAMSLLPWCCFSCSMR*ARFTSL
Trigger: CAACGATGTGAACCTGGCCAATCTCATGGAGCAGCT...AAAACAGCACCAAGGTAACAAGCTCATGGCTGTTGTTCCTGTCAGTTCCTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571467.1
CDS-3UTR CAA 90 bp GGAGAGGAACTGACAGGAACAACAGCCATGAGCTTGTTACCTTGGTGCTGTTTTTTCTCCCGGATGTTCTaGAACCTCAGCGGAAGGAGA +
Preference number: 5 (lower is better)
Translates to: GEELTGTTAMSLLPWCCFFSRMF*NLSGRR
Trigger: TCTCCTTCCGCTGAGGTTCAAGAACATCCGGGAGAA...AAAACAGCACCAAGGTAACAAGCTCATGGCTGTTGTTCCTGTCAGTTCCTCTCC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000571467.1
CDS-3UTR CAA 90 bp AGGGGAGGACATTCAAATATACACCTTAATACTGATGCAGAAAGAGCTTCATGTGTGAGGGGCCCATGGTaGAAGCCGACGCGGAGCTTG +
Preference number: 5 (lower is better)
Translates to: RGGHSNIHLNTDAERASCVRGPW*KPTRSL
Trigger: CAAGCTCCGCGTCGGCTTCAACCATGGGCCCCTCAC...ACATGAAGCTCTTTCTGCATCAGTATTAAGGTGTATATTTGAATGTCCTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS TCA 90 bp AGTAGGCCACCCCCAGACACAAACTCAGGTACAAAGGTAAGTGCATaGCGGTATAGAGCAAAAAGAGCACTTCGATGCACATGGAGAAGC +
Preference number: 5 (lower is better)
Translates to: SRPPPDTNSGTKVSA*RYRAKRALRCTWRS
Trigger: GCTTCTCCATGTGCATCGAAGTGCTCTTTTTGCTCTATACCGTCATGCACTTACCTTTGTACCTGAGTTTGTGTCTGGGGGTGGCCTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CCA 90 bp ATCAGGTATGTCTTCAAACCTTTCAACTGGTCAGCAACCACGCTCTaGCCCAGCCGTTCAATAACTTTCCCATCTTCCATTTCGTACCGG +
Preference number: 5 (lower is better)
Translates to: IRYVFKPFNWSATTL*PSRSITFPSSISYR
Trigger: CCGGTACGAAATGGAAGATGGGAAAGTTATTGAACGGCTGGGCCAGAGCGTGGTTGCTGACCAGTTGAAAGGTTTGAAGACATACCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294016.8
ENST00000572288.1
CDS-3UTR CAA 90 bp AGGGGAGGACATTCAAATATACACCTTAATACTGATGCAGAAAGAGCTTCATGTATGGATTGCCCCACCTaGAGGAAGGTGCTCCTGGAC +
Preference number: 5 (lower is better)
Translates to: RGGHSNIHLNTDAERASCMDCPT*RKVLLD
Trigger: GTCCAGGAGCACCTTCCTCAAGGTGGGGCAATCCAT...ACATGAAGCTCTTTCTGCATCAGTATTAAGGTGTATATTTGAATGTCCTCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp ACTCCTTACCTCGAAAATCTAGAAATTCAAATGCAGACGTGTCTTTGGAAACTATGCTTGGGGTTGATCTaGACGCGCACGCTGTTGCTG +
Preference number: 5 (lower is better)
Translates to: TPYLENLEIQMQTCLWKLCLGLI*TRTLLL
Trigger: CAGCAACAGCGTGCGCGTCAAGATCAACCCCAAGCA...TAGTTTCCAAAGACACGTCTGCATTTGAATTTCTAGATTTTCGAGGTAAGGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp AAAGCACAACAGCCAAATACAAATATTACTGTGTTTCGACAAACAGAGCACCTCCACAGCATGTTGTTGTaGAAGTCGTCCACCACGCGC +
Preference number: 5 (lower is better)
Translates to: KAQQPNTNITVFRQTEHLHSMLL*KSSTTR
Trigger: GCGCGTGGTGGACGACTTCAACAACAACATGCTGTG...GAGGTGCTCTGTTTGTCGAAACACAGTAATATTTGTATTTGGCTGTTGTGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS-3UTR CAA 90 bp CTGTGGCGCTTGGAAAGCACAACAGCCAAATACAAATATTACTGTGTTTCGACAAACCACAGCATGTTGTaGTTGAAGTCGTCCACCACG +
Preference number: 5 (lower is better)
Translates to: LWRLESTTAKYKYYCVSTNHSML*LKSSTT
Trigger: CGTGGTGGACGACTTCAACAACAACATGCTGTGGTT...TGTCGAAACACAGTAATATTTGTATTTGGCTGTTGTGCTTTCCAAGCGCCACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS TCA 90 bp TTCTCTTTCTTGATGGTGTTCTTTGTAGCGCAACAGCTTAACTTCTaGGGAAGTTGGGCTTGTCTATTCTTTCTTCTGTTGGCGTCACAT +
Preference number: 5 (lower is better)
Translates to: FSFLMVFFVAQQLNF*GSWACLFFLLLASH
Trigger: ATGTGACGCCAACAGAAGAAAGAATAGACAAGCCCAACTTCCTCAGAAGTTAAGCTGTTGCGCTACAAAGAACACCATCAAGAAAGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574721.1
CDS GCA 72 bp CGCCGCCGCGCCCGCCGCCGTGTCCCCCGCGGCCGCTaGCTCATGTCGGAAGAGCTGCCGCCGCCACCATCT +
Preference number: 6 (lower is better)
Translates to: RRRARRRVPRGR*LMSEELPPPPS
Trigger: AGATGGTGGCGGCGGCAGCTCTTCCGACATGAGGCAGCGGCCGCGGGGGACACGGCGGCGGGCGCGGCGGCG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS GCA 72 bp CCCCGCCGCGTGGCCGCCGTGGCTCCGGGACCGCTTTaGTCGCTCGCCTTCCGCGCCTCTCGCCCCGAGGGT +
Preference number: 6 (lower is better)
Translates to: PRRVAAVAPGPL*SLAFRASRPEG
Trigger: ACCCTCGGGGCGAGAGGCGCGGAAGGCGAGCGAGCAAAGCGGTCCCGGAGCCACGGCGGCCACGCGGCGGGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CAA 72 bp TCCCCGCCGCGTGGCCGCCGTGGCTCCGGGACCGCTTaGCTCGCTCGCCTTCCGCGCCTCTCGCCCCGAGGG +
Preference number: 6 (lower is better)
Translates to: SPPRGRRGSGTA*LARLPRLSPRG
Trigger: CCCTCGGGGCGAGAGGCGCGGAAGGCGAGCGAGCAAAGCGGTCCCGGAGCCACGGCGGCCACGCGGCGGGGA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CCA 72 bp CAGCCCCGCGAGCCGCCTGCGCACAAACAACTCCGCTaGCGGCGCGGAGCCCTCCATCCTGCAGGAGCCGCG +
Preference number: 6 (lower is better)
Translates to: QPREPPAHKQLR*RRGALHPAGAA
Trigger: CGCGGCTCCTGCAGGATGGAGGGCTCCGCGCCGCCAGCGGAGTTGTTTGTGCGCAGGCGGCTCGCGGGGCTG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CCA 72 bp GGGTCCCACCAGCGGCTGGAGGCCCTCTCGAACAGCTaGGGCAGCTTCTTCTGCCTGCGCAGCCGGCCTCCG +
Preference number: 6 (lower is better)
Translates to: GSHQRLEALSNS*GSFFCLRSRPP
Trigger: CGGAGGCCGGCTGCGCAGGCAGAAGAAGCTGCCCCAGCTGTTCGAGAGGGCCTCCAGCCGCTGGTGGGACCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS GCA 72 bp CAAACAACTCCGCTGGCGGCGCGGAGCCCTCCATCCTaGAGGAGCCGCGCTCCGATGCGTCAAAGGCGGCGC +
Preference number: 6 (lower is better)
Translates to: QTTPLAARSPPS*RSRAPMRQRRR
Trigger: GCGCCGCCTTTGACGCATCGGAGCGCGGCTCCTGCAGGATGGAGGGCTCCGCGCCGCCAGCGGAGTTGTTTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CCA 72 bp AGGATCTGCAGGTGCTCCTGCGGGTGGCTGCCGTCCTaGGCCTGCGCGGTGTTCAGCCCTGACGCCGCCATG +
Preference number: 6 (lower is better)
Translates to: RICRCSCGWLPS*ACAVFSPDAAM
Trigger: CATGGCGGCGTCAGGGCTGAACACCGCGCAGGCCCAGGACGGCAGCCACCCGCAGGAGCACCTGCAGATCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CAA 72 bp CTCCTCCAGCTGCGGCTCCGGAGGGAAGTTCAGACCTaGAGCGCTCCCAGCCCCGCGAGCCGCCTGCGCACA +
Preference number: 6 (lower is better)
Translates to: LLQLRLRREVQT*SAPSPASRLRT
Trigger: TGTGCGCAGGCGGCTCGCGGGGCTGGGAGCGCTCAAGGTCTGAACTTCCCTCCGGAGCCGCAGCTGGAGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CAA 90 bp CGCGCTCGCCTCCTCCAGCTGCGGCTCCGGAGGGAAGTTCAGACCTaGAGCGCTCCCAGCCCCGCGAGCCGCCTGCGCACAAACAACTCC +
Preference number: 6 (lower is better)
Translates to: RARLLQLRLRREVQT*SAPSPASRLRTNNS
Trigger: GGAGTTGTTTGTGCGCAGGCGGCTCGCGGGGCTGGGAGCGCTCAAGGTCTGAACTTCCCTCCGGAGCCGCAGCTGGAGGAGGCGAGCGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS TCA 72 bp TCCTCCAGCTGCGGCTCCGGAGGGAAGTTCAGACCTTaGGCGCTCCCAGCCCCGCGAGCCGCCTGCGCACAA +
Preference number: 6 (lower is better)
Translates to: SSSCGSGGKFRP*ALPAPRAACAQ
Trigger: TTGTGCGCAGGCGGCTCGCGGGGCTGGGAGCGCTCAAGGTCTGAACTTCCCTCCGGAGCCGCAGCTGGAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS TCA 72 bp GCAGGAGAAAGAAGACGAGAACCACCTCCTGGCCGATaGGGCTGGCGGGCCGCCGGAGGTCACGCGGCACCG +
Preference number: 6 (lower is better)
Translates to: AGERRREPPPGR*GWRAAGGHAAP
Trigger: CGGTGCCGCGTGACCTCCGGCGGCCCGCCAGCCTCATCGGCCAGGAGGTGGTTCTCGTCTTCTTTCTCCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CCA 72 bp TACAGAGCCGCTGCGAGCCCCCTCAGGGAGCCAGGCTaGTCCCGAGGGCCCAGCTTTCCCAAGACGCACCTG +
Preference number: 6 (lower is better)
Translates to: YRAAASPLREPG*SRGPSFPKTHL
Trigger: CAGGTGCGTCTTGGGAAAGCTGGGCCCTCGGGACCAGCCTGGCTCCCTGAGGGGGCTCGCAGCGGCTCTGTA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574721.1
CDS GCA 72 bp CGGCCAGTGCGGGAAGCGACACCAGGATGGCCCCGATaGAGTGACGTGGTAGCCAGCCGGCGATCCACTCCA +
Preference number: 6 (lower is better)
Translates to: RPVREATPGWPR*SDVVASRRSTP
Trigger: TGGAGTGGATCGCCGGCTGGCTACCACGTCACTGCATCGGGGCCATCCTGGTGTCGCTTCCCGCACTGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294016.8
ENST00000576936.5
CDS CCA 72 bp CTCGGTGCTGTGGTGATGCAGCAGCTGCTGGTGGGGTaGGGAAGCCATGTTGTCGAGTCCCGGGGCCTGCCC +
Preference number: 6 (lower is better)
Translates to: LGAVVMQQLLVG*GSHVVESRGLP
Trigger: GGGCAGGCCCCGGGACTCGACAACATGGCTTCCCCACCCCACCAGCAGCTGCTGCATCACCACAGCACCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CCA 72 bp GGGAGTAGACGGCCAGTGCGGGAAGCGACACCAGGATaGCCCCGATGCAGTGACGTGGTAGCCAGCCGGCGA +
Preference number: 6 (lower is better)
Translates to: GSRRPVREATPG*PRCSDVVASRR
Trigger: TCGCCGGCTGGCTACCACGTCACTGCATCGGGGCCATCCTGGTGTCGCTTCCCGCACTGGCCGTCTACTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294016.8
ENST00000576936.5
CDS TCA 72 bp AGTGCGGGAAGCGACACCAGGATGGCCCCGATGCAGTaGCGTGGTAGCCAGCCGGCGATCCACTCCAGCAGG +
Preference number: 6 (lower is better)
Translates to: SAGSDTRMAPMQ*RGSQPAIHSSR
Trigger: CCTGCTGGAGTGGATCGCCGGCTGGCTACCACGTCACTGCATCGGGGCCATCCTGGTGTCGCTTCCCGCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294016.8
ENST00000576936.5
CDS CCA 72 bp CCAGGCAGGCCTCCTCCAGGTTCACCGAGTCGAACTTaGGGTCCCACCAGCGGCTGGAGGCCCTCTCGAACA +
Preference number: 6 (lower is better)
Translates to: PGRPPPGSPSRT*GPTSGWRPSRT
Trigger: TGTTCGAGAGGGCCTCCAGCCGCTGGTGGGACCCCAAGTTCGACTCGGTGAACCTGGAGGAGGCCTGCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CCA 72 bp GAGCTGTCGCCGCGTCCTGAGACAGGCGTCAAGACCTaGAACTGCGCAGCCAGGGTCAGGGCGAACACCAGC +
Preference number: 6 (lower is better)
Translates to: ELSPRPETGVKT*NCAARVRANTS
Trigger: GCTGGTGTTCGCCCTGACCCTGGCTGCGCAGTTCCAGGTCTTGACGCCTGTCTCAGGACGCGGCGACAGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CCA 72 bp ACCTGGGACATGACGAACAGGTGGACCCCGATGGCGTaGATGCAGCCGTGGAGCAGCCCCCTGCTCAGCAGC +
Preference number: 6 (lower is better)
Translates to: TWDMTNRWTPMA*MQPWSSPLLSS
Trigger: GCTGCTGAGCAGGGGGCTGCTCCACGGCTGCATCCACGCCATCGGGGTCCACCTGTTCGTCATGTCCCAGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CCA 72 bp CTGAACCTGGAAATCTGGGGACAAGCTGGCAGCGGTTaGGGCTGTGGAGGCACCGCCCCCTCCAGCGAGGTG +
Preference number: 6 (lower is better)
Translates to: LNLEIWGQAGSG*GCGGTAPSSEV
Trigger: CACCTCGCTGGAGGGGGCGGTGCCTCCACAGCCCCAACCGCTGCCAGCTTGTCCCCAGATTTCCAGGTTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574721.1
CDS CAA 72 bp TCCAGGCAGGCCTCCTCCAGGTTCACCGAGTCGAACTaGGGGTCCCACCAGCGGCTGGAGGCCCTCTCGAAC +
Preference number: 6 (lower is better)
Translates to: SRQASSRFTESN*GSHQRLEALSN
Trigger: GTTCGAGAGGGCCTCCAGCCGCTGGTGGGACCCCAAGTTCGACTCGGTGAACCTGGAGGAGGCCTGCCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS TCA 72 bp GGCTGTGGCCGTAAGGTTGGAGCTGTCGCCGCGTCCTaGGACAGGCGTCAAGACCTGGAACTGCGCAGCCAG +
Preference number: 6 (lower is better)
Translates to: GCGRKVGAVAAS*DRRQDLELRSQ
Trigger: CTGGCTGCGCAGTTCCAGGTCTTGACGCCTGTCTCAGGACGCGGCGACAGCTCCAACCTTACGGCCACAGCC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS TCA 72 bp CTCAGAGCTGGAGACCCAGTCCACGCGGCGCTTACCTaGTGGACACCGCGAGGGACAGCACCTCCAGCAGCA +
Preference number: 6 (lower is better)
Translates to: LRAGDPVHAALT*WTPRGTAPPAA
Trigger: TGCTGCTGGAGGTGCTGTCCCTCGCGGTGTCCATCAGGTAAGCGCCGCGTGGACTGGGTCTCCAGCTCTGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574721.1
CDS CCA 72 bp GTGCTCCTGGACCTCACCTGGGACATGACGAACAGGTaGACCCCGATGGCGTGGATGCAGCCGTGGAGCAGC +
Preference number: 6 (lower is better)
Translates to: VLLDLTWDMTNR*TPMAWMQPWSS
Trigger: GCTGCTCCACGGCTGCATCCACGCCATCGGGGTCCACCTGTTCGTCATGTCCCAGGTGAGGTCCAGGAGCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CAA 72 bp GTGGTGCCGATGACCCCGGCCGTGAGGGGCCCATGGTaGAAGCCGACGCGGAGCTTGAAGTTGAACCACAGC +
Preference number: 6 (lower is better)
Translates to: VVPMTPAVRGPW*KPTRSLKLNHS
Trigger: GCTGTGGTTCAACTTCAAGCTCCGCGTCGGCTTCAACCATGGGCCCCTCACGGCCGGGGTCATCGGCACCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS GCA 72 bp TGCTCAAGACGCGGTAGCTCTCTTCGCTCACCTGGATaGGGCACTCCACGCCGGTGGTGTCCATCCTGCTGG +
Preference number: 6 (lower is better)
Translates to: CSRRGSSLRSPG*GTPRRWCPSCW
Trigger: CCAGCAGGATGGACACCACCGGCGTGGAGTGCCGCATCCAGGTGAGCGAAGAGAGCTACCGCGTCTTGAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CCA 72 bp GGTTCACCGAGTCGAACTTGGGGTCCCACCAGCGGCTaGAGGCCCTCTCGAACAGCTGGGGCAGCTTCTTCT +
Preference number: 6 (lower is better)
Translates to: GSPSRTWGPTSG*RPSRTAGAASS
Trigger: AGAAGAAGCTGCCCCAGCTGTTCGAGAGGGCCTCCAGCCGCTGGTGGGACCCCAAGTTCGACTCGGTGAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CCA 72 bp TGCCCCACCTTGAGGAAGGTGCTCCTGGACCTCACCTaGGACATGACGAACAGGTGGACCCCGATGGCGTGG +
Preference number: 6 (lower is better)
Translates to: CPTLRKVLLDLT*DMTNRWTPMAW
Trigger: CCACGCCATCGGGGTCCACCTGTTCGTCATGTCCCAGGTGAGGTCCAGGAGCACCTTCCTCAAGGTGGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CCA 72 bp TTGGTGGTGCCGATGACCCCGGCCGTGAGGGGCCCATaGTTGAAGCCGACGCGGAGCTTGAAGTTGAACCAC +
Preference number: 6 (lower is better)
Translates to: LVVPMTPAVRGP*LKPTRSLKLNH
Trigger: GTGGTTCAACTTCAAGCTCCGCGTCGGCTTCAACCATGGGCCCCTCACGGCCGGGGTCATCGGCACCACCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CCA 72 bp CCGTCCGATGCTGCCATCCACCTGGACGCGGATGTCTaGGGAGATGGACAGCTGGTGCTGTGGGATGACCCT +
Preference number: 6 (lower is better)
Translates to: PSDAAIHLDADV*GDGQLVLWDDP
Trigger: AGGGTCATCCCACAGCACCAGCTGTCCATCTCCCCAGACATCCGCGTCCAGGTGGATGGCAGCATCGGACGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CCA 72 bp TCGTCTGTGGGAGACCGTCCGATGCTGCCATCCACCTaGACGCGGATGTCTGGGGAGATGGACAGCTGGTGC +
Preference number: 6 (lower is better)
Translates to: SSVGDRPMLPST*TRMSGEMDSWC
Trigger: GCACCAGCTGTCCATCTCCCCAGACATCCGCGTCCAGGTGGATGGCAGCATCGGACGGTCTCCCACAGACGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CCA 72 bp CTGGGAGGCCATGGGCGGCCAGGAGCGCAGTTCAGATaGAGAAACAGGCAACACGTGCGGAGCACTGCTGCT +
Preference number: 6 (lower is better)
Translates to: LGGHGRPGAQFR*RNRQHVRSTAA
Trigger: AGCAGCAGTGCTCCGCACGTGTTGCCTGTTTCTCCATCTGAACTGCGCTCCTGGCCGCCCATGGCCTCCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574721.1
CDS CAA 72 bp GACAGCTGCTTGGGGTTGATCTTGACGCGCACGCTGTaGCTGTCCCCGCTGGAGTCGCAGCTCACCTCGGTG +
Preference number: 6 (lower is better)
Translates to: DSCLGLILTRTL*LSPLESQLTSV
Trigger: CACCGAGGTGAGCTGCGACTCCAGCGGGGACAGCAACAGCGTGCGCGTCAAGATCAACCCCAAGCAGCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CAA 72 bp GGGTGGCTGTTGGAGGACAGCTGCTTGGGGTTGATCTaGACGCGCACGCTGTTGCTGTCCCCGCTGGAGTCG +
Preference number: 6 (lower is better)
Translates to: GWLLEDSCLGLI*TRTLLLSPLES
Trigger: CGACTCCAGCGGGGACAGCAACAGCGTGCGCGTCAAGATCAACCCCAAGCAGCTGTCCTCCAACAGCCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CAA 90 bp CCGATGAGGCTGGCGGGCCGCCGGAGGTCACGCGGCACCGAACTATaGCACGGGTTCCTCTCGGAACTGAAATTCTGTACTGCGTCAAGG +
Preference number: 6 (lower is better)
Translates to: PMRLAGRRRSRGTEL*HGFLSELKFCTASR
Trigger: CCTTGACGCAGTACAGAATTTCAGTTCCGAGAGGAACCCGTGCAATAGTTCGGTGCCGCGTGACCTCCGGCGGCCCGCCAGCCTCATCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS GCA 72 bp GGTTGGCAATCTCGTCTGTGGGAGACCGTCCGATGCTaGCATCCACCTGGACGCGGATGTCTGGGGAGATGG +
Preference number: 6 (lower is better)
Translates to: GWQSRLWETVRC*HPPGRGCLGRW
Trigger: CCATCTCCCCAGACATCCGCGTCCAGGTGGATGGCAGCATCGGACGGTCTCCCACAGACGAGATTGCCAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS GCA 72 bp CCAGGTTGGCAATCTCGTCTGTGGGAGACCGTCCGATaGTGCCATCCACCTGGACGCGGATGTCTGGGGAGA +
Preference number: 6 (lower is better)
Translates to: PGWQSRLWETVR*CHPPGRGCLGR
Trigger: TCTCCCCAGACATCCGCGTCCAGGTGGATGGCAGCATCGGACGGTCTCCCACAGACGAGATTGCCAACCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CCA 72 bp GCAGCCAGTCTGCCTGGTCCCGCATGCTCTGGATCTTaGTGCGGTGAAGATCCGCTTCCACGTCTCCGTGGT +
Preference number: 6 (lower is better)
Translates to: AASLPGPACSGS*CGEDPLPRLRG
Trigger: ACCACGGAGACGTGGAAGCGGATCTTCACCGCACCAAGATCCAGAGCATGCGGGACCAGGCAGACTGGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CCA 72 bp GGCTGGGGACCAGTCCAACCGCTCAGCCATAAGCCATaGAGCCAGAAGAGGGAGCTAACGGCTCAGAGCTGG +
Preference number: 6 (lower is better)
Translates to: GWGPVQPLSHKP*SQKRELTAQSW
Trigger: CCAGCTCTGAGCCGTTAGCTCCCTCTTCTGGCTCCATGGCTTATGGCTGAGCGGTTGGACTGGTCCCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574721.1
CDS CAA 72 bp CTTTCTTCGGCTTTGACGGGCTCCTTCCACGGTCTCTaGGGGGACAGGTGGGCATCCTTGGCCTGCGTGCTG +
Preference number: 6 (lower is better)
Translates to: LSSALTGSFHGL*GDRWASLACVL
Trigger: CAGCACGCAGGCCAAGGATGCCCACCTGTCCCCCAAGAGACCGTGGAAGGAGCCCGTCAAAGCCGAAGAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CAA 90 bp AGCAGCTTGGTGGTGCCGATGACCCCGGCCGTGAGGGGCCCATGGTaGAAGCCGACGCGGAGCTTGAAGTTGAACCACAGCATGTTGTTG +
Preference number: 6 (lower is better)
Translates to: SSLVVPMTPAVRGPW*KPTRSLKLNHSMLL
Trigger: CAACAACATGCTGTGGTTCAACTTCAAGCTCCGCGTCGGCTTCAACCATGGGCCCCTCACGGCCGGGGTCATCGGCACCACCAAGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS TCA 72 bp CCACGACGGTGGCGAGGGAGGACCTCATCCAGGAGCTaGGCTGGCAGAAGTTACAGTAGTGCACGACGGCAA +
Preference number: 6 (lower is better)
Translates to: PRRWRGRTSSRS*AGRSYSSARRQ
Trigger: TTGCCGTCGTGCACTACTGTAACTTCTGCCAGCTCAGCTCCTGGATGAGGTCCTCCCTCGCCACCGTCGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294016.8
ENST00000576936.5
CDS GCA 72 bp GCCAGTCTGCCTGGTCCCGCATGCTCTGGATCTTGGTaGGGTGAAGATCCGCTTCCACGTCTCCGTGGTAGT +
Preference number: 6 (lower is better)
Translates to: ASLPGPACSGSW*GEDPLPRLRGS
Trigger: ACTACCACGGAGACGTGGAAGCGGATCTTCACCGCACCAAGATCCAGAGCATGCGGGACCAGGCAGACTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS GCA 72 bp CACGTGGTAGGGGATGATGTTCCTCAGCAGCCAGTCTaGCTGGTCCCGCATGCTCTGGATCTTGGTGCGGTG +
Preference number: 6 (lower is better)
Translates to: HVVGDDVPQQPV*LVPHALDLGAV
Trigger: CACCGCACCAAGATCCAGAGCATGCGGGACCAGGCAGACTGGCTGCTGAGGAACATCATCCCCTACCACGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CCA 72 bp ACTGGACAGAAGGCACCAGGTTGGCAATCTCGTCTGTaGGAGACCGTCCGATGCTGCCATCCACCTGGACGC +
Preference number: 6 (lower is better)
Translates to: TGQKAPGWQSRL*ETVRCCHPPGR
Trigger: GCGTCCAGGTGGATGGCAGCATCGGACGGTCTCCCACAGACGAGATTGCCAACCTGGTGCCTTCTGTCCAGT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CCA 72 bp CCTTCCACGGTCTCTTGGGGGACAGGTGGGCATCCTTaGCCTGCGTGCTGCTGTCAGAACCCAGAGATGTCT +
Preference number: 6 (lower is better)
Translates to: PSTVSWGTGGHP*PACCCQNPEMS
Trigger: AGACATCTCTGGGTTCTGACAGCAGCACGCAGGCCAAGGATGCCCACCTGTCCCCCAAGAGACCGTGGAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CCA 72 bp GTGGAGCAGGAGTGGAGCAGAATGACTGGGAGGCCATaGGCGGCCAGGAGCGCAGTTCAGATGGAGAAACAG +
Preference number: 6 (lower is better)
Translates to: VEQEWSRMTGRP*AARSAVQMEKQ
Trigger: CTGTTTCTCCATCTGAACTGCGCTCCTGGCCGCCCATGGCCTCCCAGTCATTCTGCTCCACTCCTGCTCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574721.1
CDS CCA 72 bp GACCACTGCCTGAGGCAAGTGCGTGGAGATGCTGTTTaGCTCCGGTACTCTGAAGAGGCGCCTGCTGTCCCA +
Preference number: 6 (lower is better)
Translates to: DHCLRQVRGDAV*LRYSEEAPAVP
Trigger: TGGGACAGCAGGCGCCTCTTCAGAGTACCGGAGCCAAACAGCATCTCCACGCACTTGCCTCAGGCAGTGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574721.1
CDS CCA 72 bp GAAACACTGAGCACACGCCACAGACAGCATGGCCCATaGCGGCCTCGGAGGAAGCTGAAAGGGTCCTGGGTA +
Preference number: 6 (lower is better)
Translates to: ETLSTRHRQHGP*RPRRKLKGSWV
Trigger: TACCCAGGACCCTTTCAGCTTCCTCCGAGGCCGCCATGGGCCATGCTGTCTGTGGCGTGTGCTCAGTGTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574721.1
CDS CCA 72 bp GTTCTGGGAAACACTGAGCACACGCCACAGACAGCATaGCCCATGGCGGCCTCGGAGGAAGCTGAAAGGGTC +
Preference number: 6 (lower is better)
Translates to: VLGNTEHTPQTA*PMAASEEAERV
Trigger: GACCCTTTCAGCTTCCTCCGAGGCCGCCATGGGCCATGCTGTCTGTGGCGTGTGCTCAGTGTTTCCCAGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574721.1
CDS CAA 72 bp CTGGCGGGCCGCCGGAGGTCACGCGGCACCGAACTATaGCACGGGTTCCTCTCGGAACTGAAATTCTGTACT +
Preference number: 6 (lower is better)
Translates to: LAGRRRSRGTEL*HGFLSELKFCT
Trigger: AGTACAGAATTTCAGTTCCGAGAGGAACCCGTGCAATAGTTCGGTGCCGCGTGACCTCCGGCGGCCCGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CAA 90 bp CCGGCCGTGAGGGGCCCATGGTTGAAGCCGACGCGGAGCTTGAAGTaGAACCACAGCATGTTGTTGTTGAAGTCGTCCACCACGCGCATC +
Preference number: 6 (lower is better)
Translates to: PAVRGPWLKPTRSLK*NHSMLLLKSSTTRI
Trigger: GATGCGCGTGGTGGACGACTTCAACAACAACATGCTGTGGTTCAACTTCAAGCTCCGCGTCGGCTTCAACCATGGGCCCCTCACGGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CAA 90 bp AATCGACCCCTTTCTTCGGCTTTGACGGGCTCCTTCCACGGTCTCTaGGGGGACAGGTGGGCATCCTTGGCCTGCGTGCTGCTGTCAGAA +
Preference number: 6 (lower is better)
Translates to: NRPLSSALTGSFHGL*GDRWASLACVLLSE
Trigger: TTCTGACAGCAGCACGCAGGCCAAGGATGCCCACCTGTCCCCCAAGAGACCGTGGAAGGAGCCCGTCAAAGCCGAAGAAAGGGGTCGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS TCA 72 bp CTCGGGCAGCGGGTGGGCGCCGCCTCACACACTCTTTaGAACGTTGAGCTTGGTGAGTTCGTTGGCTTCTTC +
Preference number: 6 (lower is better)
Translates to: LGQRVGAASHTL*NVELGEFVGFF
Trigger: GAAGAAGCCAACGAACTCACCAAGCTCAACGTTTCAAAGAGTGTGTGAGGCGGCGCCCACCCGCTGCCCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CCA 72 bp CGACCGAACAGATCGTTCAGGAGACCCACCAGGGCGTaGGCAGACTTGTTGGCACTCATCTTGGTGAAGCCC +
Preference number: 6 (lower is better)
Translates to: RPNRSFRRPTRA*ADLLALILVKP
Trigger: GGGCTTCACCAAGATGAGTGCCAACAAGTCTGCCCACGCCCTGGTGGGTCTCCTGAACGATCTGTTCGGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CCA 72 bp GAGGCACGGTGGCCGCCTCGTACTTCAGGAAGCAGGTaGTGGACAGCGTCAGAAACACTGTGGTCGACAGAA +
Preference number: 6 (lower is better)
Translates to: EARWPPRTSGSR*WTASETLWSTE
Trigger: TTCTGTCGACCACAGTGTTTCTGACGCTGTCCACCACCTGCTTCCTGAAGTACGAGGCGGCCACCGTGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294016.8
ENST00000574721.1
ENST00000576936.5
CDS CCA 72 bp GACGCGGATGTCTGGGGAGATGGACAGCTGGTGCTGTaGGATGACCCTGTGATCCGTGCACTTTGGGTACAG +
Preference number: 6 (lower is better)
Translates to: DADVWGDGQLVL*DDPVIRALWVQ
Trigger: CTGTACCCAAAGTGCACGGATCACAGGGTCATCCCACAGCACCAGCTGTCCATCTCCCCAGACATCCGCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CCA 72 bp CTGTGTTTCGACAAACAGAGCACCTCGGGCAGCGGGTaGGCGCCGCCTCACACACTCTTTGAAACGTTGAGC +
Preference number: 6 (lower is better)
Translates to: LCFDKQSTSGSG*APPHTLFETLS
Trigger: GCTCAACGTTTCAAAGAGTGTGTGAGGCGGCGCCCACCCGCTGCCCGAGGTGCTCTGTTTGTCGAAACACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CAA 90 bp ATGACCCCGGCCGTGAGGGGCCCATGGTTGAAGCCGACGCGGAGCTaGAAGTTGAACCACAGCATGTTGTTGTTGAAGTCGTCCACCACG +
Preference number: 6 (lower is better)
Translates to: MTPAVRGPWLKPTRS*KLNHSMLLLKSSTT
Trigger: CGTGGTGGACGACTTCAACAACAACATGCTGTGGTTCAACTTCAAGCTCCGCGTCGGCTTCAACCATGGGCCCCTCACGGCCGGGGTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CAA 90 bp GCGCCTCACGCCAGACTCAAAGCCATTCATTTCTGCCCTGGGATGTaGGATAAGGGCAGCAGACGCTCAAGGTCAGGGCTGCCTCCCCAT +
Preference number: 6 (lower is better)
Translates to: APHARLKAIHFCPGM*DKGSRRSRSGLPPH
Trigger: ATGGGGAGGCAGCCCTGACCTTGAGCGTCTGCTGCCCTTATCCAACATCCCAGGGCAGAAATGAATGGCTTTGAGTCTGGCGTGAGGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574721.1
CDS TCA 72 bp CACACACCAGGAGGAAGCACAGCGCGGGGGCGACCATaGCGATCAGTCTGGATCTCATGTGGACCGCAAAAT +
Preference number: 6 (lower is better)
Translates to: HTPGGSTARGRP*RSVWISCGPQN
Trigger: ATTTTGCGGTCCACATGAGATCCAGACTGATCGTCATGGTCGCCCCCGCGCTGTGCTTCCTCCTGGTGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS GCA 72 bp GTCTCTTGGGGGACAGGTGGGCATCCTTGGCCTGCGTaGTGCTGTCAGAACCCAGAGATGTCTTGTCCACAT +
Preference number: 6 (lower is better)
Translates to: VSWGTGGHPWPA*CCQNPEMSCPH
Trigger: ATGTGGACAAGACATCTCTGGGTTCTGACAGCAGCACGCAGGCCAAGGATGCCCACCTGTCCCCCAAGAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS GCA 72 bp CCGGCGCCTCACGCCAGACTCAAAGCCATTCATTTCTaGCCTGGGATGTTGGATAAGGGCAGCAGACGCTCA +
Preference number: 6 (lower is better)
Translates to: PAPHARLKAIHF*PGMLDKGSRRS
Trigger: TGAGCGTCTGCTGCCCTTATCCAACATCCCAGGGCAGAAATGAATGGCTTTGAGTCTGGCGTGAGGCGCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574721.1
CDS CCA 72 bp GCACGGTGGCCGCCTCGTACTTCAGGAAGCAGGTGGTaGACAGCGTCAGAAACACTGTGGTCGACAGAAACA +
Preference number: 6 (lower is better)
Translates to: ARWPPRTSGSRW*TASETLWSTET
Trigger: TGTTTCTGTCGACCACAGTGTTTCTGACGCTGTCCACCACCTGCTTCCTGAAGTACGAGGCGGCCACCGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294016.8
ENST00000574721.1
ENST00000576936.5
CDS CCA 72 bp TGCTGGCGAAGATCACCCCTCCGCTGTCATGGTTCTTaGAGTAGGTCTGGGACACCTTCAGCTGCTCAGCCA +
Preference number: 6 (lower is better)
Translates to: CWRRSPLRCHGS*SRSGTPSAAQP
Trigger: TGGCTGAGCAGCTGAAGGTGTCCCAGACCTACTCCAAGAACCATGACAGCGGAGGGGTGATCTTCGCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CCA 72 bp TCACCTTCTCCTTTGCAGTCTCTGAACCTGGAAATCTaGGGACAAGCTGGCAGCGGTTGGGGCTGTGGAGGC +
Preference number: 6 (lower is better)
Translates to: SPSPLQSLNLEI*GQAGSGWGCGG
Trigger: GCCTCCACAGCCCCAACCGCTGCCAGCTTGTCCCCAGATTTCCAGGTTCAGAGACTGCAAAGGAGAAGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574721.1
CDS CAA 72 bp TCCAGGTCCTTCCCGTGCATAATGGATTGCCCCACCTaGAGGAAGGTGCTCCTGGACCTCACCTGGGACATG +
Preference number: 6 (lower is better)
Translates to: SRSFPCIMDCPT*RKVLLDLTWDM
Trigger: CATGTCCCAGGTGAGGTCCAGGAGCACCTTCCTCAAGGTGGGGCAATCCATTATGCACGGGAAGGACCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CAA 72 bp TCCTCCAGAAGCCTTGGTGCTGTTTTTATGCTCGTCTaGGCAGCCGTTTTGAGGTGCTCCTCCCTCGGCGCC +
Preference number: 6 (lower is better)
Translates to: SSRSLGAVFMLV*AAVLRCSSLGA
Trigger: GGCGCCGAGGGAGGAGCACCTCAAAACGGCTGCCAAGACGAGCATAAAAACAGCACCAAGGCTTCTGGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CAA 90 bp CTGCAGCTAGAGGAGATGCTGTATTTGCAGTGCTTGGGGTGGCTGTaGGAGGACAGCTGCTTGGGGTTGATCTTGACGCGCACGCTGTTG +
Preference number: 6 (lower is better)
Translates to: LQLEEMLYLQCLGWL*EDSCLGLILTRTLL
Trigger: CAACAGCGTGCGCGTCAAGATCAACCCCAAGCAGCTGTCCTCCAACAGCCACCCCAAGCACTGCAAATACAGCATCTCCTCTAGCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CAA 90 bp GAACCCAGAGATGTCTTGTCCACATACTGGACAGAAGGCACCAGGTaGGCAATCTCGTCTGTGGGAGACCGTCCGATGCTGCCATCCACC +
Preference number: 6 (lower is better)
Translates to: EPRDVLSTYWTEGTR*AISSVGDRPMLPST
Trigger: GGTGGATGGCAGCATCGGACGGTCTCCCACAGACGAGATTGCCAACCTGGTGCCTTCTGTCCAGTATGTGGACAAGACATCTCTGGGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CAA 90 bp TCGTCTTTCTCTATGGCTTTGCCAAATCGACCCCTTTCTTCGGCTTaGACGGGCTCCTTCCACGGTCTCTTGGGGGACAGGTGGGCATCC +
Preference number: 6 (lower is better)
Translates to: SSFSMALPNRPLSSA*TGSFHGLLGDRWAS
Trigger: GGATGCCCACCTGTCCCCCAAGAGACCGTGGAAGGAGCCCGTCAAAGCCGAAGAAAGGGGTCGATTTGGCAAAGCCATAGAGAAAGACGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS TCA 72 bp TCTCCTTCTTCTCCTGGCAGAACTGCTCGATGGCCTTaGTCATGCCCAGGCCCATCTCGATGCAGCAGTAGG +
Preference number: 6 (lower is better)
Translates to: SPSSPGRTARWP*SCPGPSRCSSR
Trigger: CCTACTGCTGCATCGAGATGGGCCTGGGCATGATCAAGGCCATCGAGCAGTTCTGCCAGGAGAAGAAGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS TCA 72 bp AGCTTCTCCTCTTGGGGAGGGCTGAGGAGCCCGTTCTaGGTTTTGGGATTAGGTCCTCCAGAAGCCTTGGTG +
Preference number: 6 (lower is better)
Translates to: SFSSWGGLRSPF*VLGLGPPEALV
Trigger: CACCAAGGCTTCTGGAGGACCTAATCCCAAAACTCAGAACGGGCTCCTCAGCCCTCCCCAAGAGGAGAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS TCA 72 bp CTATGGCTTTGCCAAATCGACCCCTTTCTTCGGCTTTaGCGGGCTCCTTCCACGGTCTCTTGGGGGACAGGT +
Preference number: 6 (lower is better)
Translates to: LWLCQIDPFLRL*RAPSTVSWGTG
Trigger: ACCTGTCCCCCAAGAGACCGTGGAAGGAGCCCGTCAAAGCCGAAGAAAGGGGTCGATTTGGCAAAGCCATAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS TCA 72 bp CTCCCTCGGCGCCGGCTTCAGATTTGGGAGCAAATGTaGTTCCGCACGAAGGGCAGGTCTTTCAACTGGTCA +
Preference number: 6 (lower is better)
Translates to: LPRRRLQIWEQM*FRTKGRSFNWS
Trigger: TGACCAGTTGAAAGACCTGCCCTTCGTGCGGAATCACATTTGCTCCCAAATCTGAAGCCGGCGCCGAGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571467.1
CDS CAA 72 bp TCGTTCAGGAGACCCACCAGGGCGTGGGCAGACTTGTaGGCACTCATCTTGGTGAAGCCCACGATATCTGCA +
Preference number: 6 (lower is better)
Translates to: SFRRPTRAWADL*ALILVKPTISA
Trigger: TGCAGATATCGTGGGCTTCACCAAGATGAGTGCCAACAAGTCTGCCCACGCCCTGGTGGGTCTCCTGAACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CAA 72 bp GCCGTGAGGGGCCCATGGTTGAAGCCGACGCGGAGCTaGAAGTTGAACCACAGCATGTTGTTGTTGAAGTCG +
Preference number: 6 (lower is better)
Translates to: AVRGPWLKPTRS*KLNHSMLLLKS
Trigger: CGACTTCAACAACAACATGCTGTGGTTCAACTTCAAGCTCCGCGTCGGCTTCAACCATGGGCCCCTCACGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CAA 72 bp TCTATGGCTTTGCCAAATCGACCCCTTTCTTCGGCTTaGACGGGCTCCTTCCACGGTCTCTTGGGGGACAGG +
Preference number: 6 (lower is better)
Translates to: SMALPNRPLSSA*TGSFHGLLGDR
Trigger: CCTGTCCCCCAAGAGACCGTGGAAGGAGCCCGTCAAAGCCGAAGAAAGGGGTCGATTTGGCAAAGCCATAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CAA 72 bp CTCCTGCAAGATCTTGGTGCTGTTTTTATGCTCGTCTaGGCAGCCGTTTTGAGGTGCTCCTCCCTCGGCGCC +
Preference number: 6 (lower is better)
Translates to: LLQDLGAVFMLV*AAVLRCSSLGA
Trigger: GGCGCCGAGGGAGGAGCACCTCAAAACGGCTGCCAAGACGAGCATAAAAACAGCACCAAGATCTTGCAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571889.1
CDS CAA 90 bp TTTTCCACTTCCAGGTCCTTCCCGTGCATAATGGATTGCCCCACCTaGAGGAAGGTGCTCCTGGACCTCACCTGGGACATGACGAACAGG +
Preference number: 6 (lower is better)
Translates to: FSTSRSFPCIMDCPT*RKVLLDLTWDMTNR
Trigger: CCTGTTCGTCATGTCCCAGGTGAGGTCCAGGAGCACCTTCCTCAAGGTGGGGCAATCCATTATGCACGGGAAGGACCTGGAAGTGGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CAA 90 bp GGCAGCGGGTGGGCGCCGCCTCACACACTCTTTGAAACGTTGAGCTaGGTGAGTTCGTTGGCTTCTTCTATTCCTGTTTCGTCACAGTCG +
Preference number: 6 (lower is better)
Translates to: GSGWAPPHTLFETLS*VSSLASSIPVSSQS
Trigger: CGACTGTGACGAAACAGGAATAGAAGAAGCCAACGAACTCACCAAGCTCAACGTTTCAAAGAGTGTGTGAGGCGGCGCCCACCCGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CAA 90 bp ACCTCGGGCAGCGGGTGGGCGCCGCCTCACACACTCTTTGAAACGTaGAGCTTGGTGAGTTCGTTGGCTTCTTCTATTCCTGTTTCGTCA +
Preference number: 6 (lower is better)
Translates to: TSGSGWAPPHTLFET*SLVSSLASSIPVSS
Trigger: TGACGAAACAGGAATAGAAGAAGCCAACGAACTCACCAAGCTCAACGTTTCAAAGAGTGTGTGAGGCGGCGCCCACCCGCTGCCCGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS TCA 72 bp TTGGTGCTGTTTTTATGCTCGTCTTGGCAGCCGTTTTaGGGTGCTCCTCCCTCGGCGCCGGCTTCAGATTTG +
Preference number: 6 (lower is better)
Translates to: LVLFLCSSWQPF*GAPPSAPASDL
Trigger: CAAATCTGAAGCCGGCGCCGAGGGAGGAGCACCTCAAAACGGCTGCCAAGACGAGCATAAAAACAGCACCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000294016.8
ENST00000571467.1
ENST00000571889.1
ENST00000572288.1
ENST00000575550.5
CDS TCA 72 bp AGTAGTGCACGACGGCAATCAGCGCGGCCGAGCCTGTaGACACTGGGAAGTGTATGTTGGTCTCATATTCGG +
Preference number: 6 (lower is better)
Translates to: SSARRQSARPSL*TLGSVCWSHIR
Trigger: CCGAATATGAGACCAACATACACTTCCCAGTGTTCACAGGCTCGGCCGCGCTGATTGCCGTCGTGCACTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294016.8
ENST00000576936.5
CDS TCA 72 bp CCGCTTCCACGTCTCCGTGGTAGTGGAGGCGGTAGCTaGCTTCAAATTCGCGATTCAGGAACCAGACCAACA +
Preference number: 6 (lower is better)
Translates to: PLPRLRGSGGGS*LQIRDSGTRPT
Trigger: TGTTGGTCTGGTTCCTGAATCGCGAATTTGAAGTCAGCTACCGCCTCCACTACCACGGAGACGTGGAAGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS TCA 72 bp GCCTCTGCACAGCTGCAGCGAGACTCCTTGGCTCTCTaGCCCGATATCAGGTATGTCTTCAAACCAGCGACA +
Preference number: 6 (lower is better)
Translates to: ASAQLQRDSLAL*PDIRYVFKPAT
Trigger: TGTCGCTGGTTTGAAGACATACCTGATATCGGGTCAGAGAGCCAAGGAGTCTCGCTGCAGCTGTGCAGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571889.1
CDS TCA 72 bp TTCTTCTGTTGGCGTCACATCCAAGAGACCACTGCCTaGGGCAAGTGCGTGGAGATGCTGTTTGGCTCCGGT +
Preference number: 6 (lower is better)
Translates to: FFCWRHIQETTA*GKCVEMLFGSG
Trigger: ACCGGAGCCAAACAGCATCTCCACGCACTTGCCTCAGGCAGTGGTCTCTTGGATGTGACGCCAACAGAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574721.1
CDS GCA 72 bp TCACGGTCCCTCTGTAGTCGAAGTCATAGCCCATCTTaGTCAAGACGCGGTAGCTCTCTTCGCTCACCTGGA +
Preference number: 6 (lower is better)
Translates to: SRSLCSRSHSPS*SRRGSSLRSPG
Trigger: TCCAGGTGAGCGAAGAGAGCTACCGCGTCTTGAGCAAGATGGGCTATGACTTCGACTACAGAGGGACCGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CCA 72 bp CTGGTGCTGTGGGATGACCCTGTGATCCGTGCACTTTaGGTACAGGTAGGTCTTCATCTGGCCTTTCCCCTT +
Preference number: 6 (lower is better)
Translates to: LVLWDDPVIRAL*VQVGLHLAFPL
Trigger: AAGGGGAAAGGCCAGATGAAGACCTACCTGTACCCAAAGTGCACGGATCACAGGGTCATCCCACAGCACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CCA 72 bp ATGTCTTGTCCACATACTGGACAGAAGGCACCAGGTTaGCAATCTCGTCTGTGGGAGACCGTCCGATGCTGC +
Preference number: 6 (lower is better)
Translates to: MSCPHTGQKAPG*QSRLWETVRCC
Trigger: GCAGCATCGGACGGTCTCCCACAGACGAGATTGCCAACCTGGTGCCTTCTGTCCAGTATGTGGACAAGACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CAA 72 bp AGATCGTTCAGGAGACCCACCAGGGCGTGGGCAGACTaGTTGGCACTCATCTTGGTGAAGCCCACGATATCT +
Preference number: 6 (lower is better)
Translates to: RSFRRPTRAWAD*LALILVKPTIS
Trigger: AGATATCGTGGGCTTCACCAAGATGAGTGCCAACAAGTCTGCCCACGCCCTGGTGGGTCTCCTGAACGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CAA 72 bp TTGTTGTTGAAGTCGTCCACCACGCGCATCATCTCCTaGGCGAACTCGAACAGGATCTGCAGGTGCTCCTGC +
Preference number: 6 (lower is better)
Translates to: LLLKSSTTRIIS*ANSNRICRCSC
Trigger: GCAGGAGCACCTGCAGATCCTGTTCGAGTTCGCCAAGGAGATGATGCGCGTGGTGGACGACTTCAACAACAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CAA 72 bp AGGGGCCCATGGTTGAAGCCGACGCGGAGCTTGAAGTaGAACCACAGCATGTTGTTGTTGAAGTCGTCCACC +
Preference number: 6 (lower is better)
Translates to: RGPWLKPTRSLK*NHSMLLLKSST
Trigger: GGTGGACGACTTCAACAACAACATGCTGTGGTTCAACTTCAAGCTCCGCGTCGGCTTCAACCATGGGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CAA 72 bp GATGTCTTGTCCACATACTGGACAGAAGGCACCAGGTaGGCAATCTCGTCTGTGGGAGACCGTCCGATGCTG +
Preference number: 6 (lower is better)
Translates to: DVLSTYWTEGTR*AISSVGDRPML
Trigger: CAGCATCGGACGGTCTCCCACAGACGAGATTGCCAACCTGGTGCCTTCTGTCCAGTATGTGGACAAGACATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CAA 72 bp TCTTTCATCAGGCTTGGTGCTGTTTTTATGCTCGTCTaGGCAGCCGTTTTGAGGTGCTCCTCCCTCGGCGCC +
Preference number: 6 (lower is better)
Translates to: SFIRLGAVFMLV*AAVLRCSSLGA
Trigger: GGCGCCGAGGGAGGAGCACCTCAAAACGGCTGCCAAGACGAGCATAAAAACAGCACCAAGCCTGATGAAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575550.5
CDS CAA 90 bp TGGTTGAAGCCGACGCGGAGCTTGAAGTTGAACCACAGCATGTTGTaGTTGAAGTCGTCCACCACGCGCATCATCTCCTTGGCGAACTCG +
Preference number: 6 (lower is better)
Translates to: WLKPTRSLKLNHSML*LKSSTTRIISLANS
Trigger: CGAGTTCGCCAAGGAGATGATGCGCGTGGTGGACGACTTCAACAACAACATGCTGTGGTTCAACTTCAAGCTCCGCGTCGGCTTCAACCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CAA 90 bp CCATGGTTGAAGCCGACGCGGAGCTTGAAGTTGAACCACAGCATGTaGTTGTTGAAGTCGTCCACCACGCGCATCATCTCCTTGGCGAAC +
Preference number: 6 (lower is better)
Translates to: PWLKPTRSLKLNHSM*LLKSSTTRIISLAN
Trigger: GTTCGCCAAGGAGATGATGCGCGTGGTGGACGACTTCAACAACAACATGCTGTGGTTCAACTTCAAGCTCCGCGTCGGCTTCAACCATGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS TCA 72 bp ACACTGGGAAGTGTATGTTGGTCTCATATTCGGAGGTaGCATGGGAGTAGACGGCCAGTGCGGGAAGCGACA +
Preference number: 6 (lower is better)
Translates to: TLGSVCWSHIRR*HGSRRPVREAT
Trigger: TGTCGCTTCCCGCACTGGCCGTCTACTCCCATGTCACCTCCGAATATGAGACCAACATACACTTCCCAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294016.8
ENST00000576936.5
CDS TCA 72 bp GCCTCTGCACAGCTGCAGCGAGACTCCTTGGCTCTCTaGCCCGATATCAGGTATGTCTTCAAACCGAAGGTT +
Preference number: 6 (lower is better)
Translates to: ASAQLQRDSLAL*PDIRYVFKPKV
Trigger: AACCTTCGGTTTGAAGACATACCTGATATCGGGTCAGAGAGCCAAGGAGTCTCGCTGCAGCTGTGCAGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575550.5
CDS CAA 72 bp TTTTTCCACTTCCAGGTCCTTCCCGTGCATAATGGATaGCCCCACCTTGAGGAAGGTGCTCCTGGACCTCAC +
Preference number: 6 (lower is better)
Translates to: FFHFQVLPVHNG*PHLEEGAPGPH
Trigger: GTGAGGTCCAGGAGCACCTTCCTCAAGGTGGGGCAATCCATTATGCACGGGAAGGACCTGGAAGTGGAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CAA 72 bp ACGCGGAGCTTGAAGTTGAACCACAGCATGTTGTTGTaGAAGTCGTCCACCACGCGCATCATCTCCTTGGCG +
Preference number: 6 (lower is better)
Translates to: TRSLKLNHSMLL*KSSTTRIISLA
Trigger: CGCCAAGGAGATGATGCGCGTGGTGGACGACTTCAACAACAACATGCTGTGGTTCAACTTCAAGCTCCGCGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CAA 72 bp CCGACGCGGAGCTTGAAGTTGAACCACAGCATGTTGTaGTTGAAGTCGTCCACCACGCGCATCATCTCCTTG +
Preference number: 6 (lower is better)
Translates to: PTRSLKLNHSML*LKSSTTRIISL
Trigger: CAAGGAGATGATGCGCGTGGTGGACGACTTCAACAACAACATGCTGTGGTTCAACTTCAAGCTCCGCGTCGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CAA 72 bp AAGCCGACGCGGAGCTTGAAGTTGAACCACAGCATGTaGTTGTTGAAGTCGTCCACCACGCGCATCATCTCC +
Preference number: 6 (lower is better)
Translates to: KPTRSLKLNHSM*LLKSSTTRIIS
Trigger: GGAGATGATGCGCGTGGTGGACGACTTCAACAACAACATGCTGTGGTTCAACTTCAAGCTCCGCGTCGGCTT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CAA 72 bp AGCGGGTGGGCGCCGCCTCACACACTCTTTGAAACGTaGAGCTTGGTGAGTTCGTTGGCTTCTTCTATTCCT +
Preference number: 6 (lower is better)
Translates to: SGWAPPHTLFET*SLVSSLASSIP
Trigger: AGGAATAGAAGAAGCCAACGAACTCACCAAGCTCAACGTTTCAAAGAGTGTGTGAGGCGGCGCCCACCCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CAA 90 bp CGACCGAACAGATCGTTCAGGAGACCCACCAGGGCGTGGGCAGACTaGTTGGCACTCATCTTGGTGAAGCCCACGATATCTGCAAATAAA +
Preference number: 6 (lower is better)
Translates to: RPNRSFRRPTRAWAD*LALILVKPTISANK
Trigger: TTTATTTGCAGATATCGTGGGCTTCACCAAGATGAGTGCCAACAAGTCTGCCCACGCCCTGGTGGGTCTCCTGAACGATCTGTTCGGTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CAA 90 bp TTGAAGCCGACGCGGAGCTTGAAGTTGAACCACAGCATGTTGTTGTaGAAGTCGTCCACCACGCGCATCATCTCCTTGGCGAACTCGAAC +
Preference number: 6 (lower is better)
Translates to: LKPTRSLKLNHSMLL*KSSTTRIISLANSN
Trigger: GTTCGAGTTCGCCAAGGAGATGATGCGCGTGGTGGACGACTTCAACAACAACATGCTGTGGTTCAACTTCAAGCTCCGCGTCGGCTTCAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS TCA 72 bp GCCTCTGCACAGCTGCAGCGAGACTCCTTGGCTCTCTaGCCCGATATCAGGTATGTCTTCAAACCTTTCAAC +
Preference number: 6 (lower is better)
Translates to: ASAQLQRDSLAL*PDIRYVFKPFN
Trigger: GTTGAAAGGTTTGAAGACATACCTGATATCGGGTCAGAGAGCCAAGGAGTCTCGCTGCAGCTGTGCAGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294016.8
ENST00000572288.1
CDS CCA 72 bp AAAGCAAGGCCTCTGCACAGCTGCAGCGAGACTCCTTaGCTCTCTGACCCGATATCAGGTATGTCTTCAAAC +
Preference number: 6 (lower is better)
Translates to: KARPLHSCSETP*LSDPISGMSSN
Trigger: GTTTGAAGACATACCTGATATCGGGTCAGAGAGCCAAGGAGTCTCGCTGCAGCTGTGCAGAGGCCTTGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294016.8
ENST00000571889.1
ENST00000572288.1
ENST00000575550.5
CDS CCA 72 bp CTGCTGTCAGAACCCAGAGATGTCTTGTCCACATACTaGACAGAAGGCACCAGGTTGGCAATCTCGTCTGTG +
Preference number: 6 (lower is better)
Translates to: LLSEPRDVLSTY*TEGTRLAISSV
Trigger: CACAGACGAGATTGCCAACCTGGTGCCTTCTGTCCAGTATGTGGACAAGACATCTCTGGGTTCTGACAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CAA 90 bp CCGAACAGATCGTTCAGGAGACCCACCAGGGCGTGGGCAGACTTGTaGGCACTCATCTTGGTGAAGCCCACGATATCTGCAAATAAAATA +
Preference number: 6 (lower is better)
Translates to: PNRSFRRPTRAWADL*ALILVKPTISANKI
Trigger: TATTTTATTTGCAGATATCGTGGGCTTCACCAAGATGAGTGCCAACAAGTCTGCCCACGCCCTGGTGGGTCTCCTGAACGATCTGTTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS TCA 72 bp TTGGGTACAGGTAGGTCTTCATCTGGCCTTTCCCCTTaGCATTCACGGTCCCTCTGTAGTCGAAGTCATAGC +
Preference number: 6 (lower is better)
Translates to: LGTGRSSSGLSP*HSRSLCSRSHS
Trigger: GCTATGACTTCGACTACAGAGGGACCGTGAATGTCAAGGGGAAAGGCCAGATGAAGACCTACCTGTACCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS TCA 72 bp GCTCACGAAAGCAGGATTAGCGTCTGTTTTGTTCACTaGTGCAACCACAGAGCCGAGAATAGTGCCTGGCTC +
Preference number: 6 (lower is better)
Translates to: AHESRISVCFVH*CNHRAENSAWL
Trigger: GAGCCAGGCACTATTCTCGGCTCTGTGGTTGCATCAGTGAACAAAACAGACGCTAATCCTGCTTTCGTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571889.1
CDS GCA 72 bp CGATCAGTCTGGATCTCATGTGGACCGCAAAATAGATaGTCCACAGAAGGCAGGCGAAGCCGATGTAGAAGA +
Preference number: 6 (lower is better)
Translates to: RSVWISCGPQNR*STEGRRSRCRR
Trigger: TCTTCTACATCGGCTTCGCCTGCCTTCTGTGGAGCATCTATTTTGCGGTCCACATGAGATCCAGACTGATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CAA 72 bp CCCACCAGGGCGTGGGCAGACTTGTTGGCACTCATCTaGGTGAAGCCCACGATATCTGCAAATAAAATACTG +
Preference number: 6 (lower is better)
Translates to: PTRAWADLLALI*VKPTISANKIL
Trigger: CAGTATTTTATTTGCAGATATCGTGGGCTTCACCAAGATGAGTGCCAACAAGTCTGCCCACGCCCTGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CAA 72 bp TGGGCGCCGCCTCACACACTCTTTGAAACGTTGAGCTaGGTGAGTTCGTTGGCTTCTTCTATTCCTGTTTCG +
Preference number: 6 (lower is better)
Translates to: WAPPHTLFETLS*VSSLASSIPVS
Trigger: CGAAACAGGAATAGAAGAAGCCAACGAACTCACCAAGCTCAACGTTTCAAAGAGTGTGTGAGGCGGCGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CAA 90 bp TTCAGGAGACCCACCAGGGCGTGGGCAGACTTGTTGGCACTCATCTaGGTGAAGCCCACGATATCTGCAAATAAAATACTGACTTCTTCG +
Preference number: 6 (lower is better)
Translates to: FRRPTRAWADLLALI*VKPTISANKILTSS
Trigger: CGAAGAAGTCAGTATTTTATTTGCAGATATCGTGGGCTTCACCAAGATGAGTGCCAACAAGTCTGCCCACGCCCTGGTGGGTCTCCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CAA 90 bp GCTTCTTCTATTCCTGTTTCGTCACAGTCGTCTTTCTCTATGGCTTaGCCAAATCGACCCCTTTCTTCGGCTTTGACGGGCTCCTTCCAC +
Preference number: 6 (lower is better)
Translates to: ASSIPVSSQSSFSMA*PNRPLSSALTGSFH
Trigger: GTGGAAGGAGCCCGTCAAAGCCGAAGAAAGGGGTCGATTTGGCAAAGCCATAGAGAAAGACGACTGTGACGAAACAGGAATAGAAGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS GCA 72 bp GGGCAGGTCTTAAGGTTATCAAAGGTTTTGACAGTCTaGGCCAAGTCACTGACATTCCCTGATGACGCTGTC +
Preference number: 6 (lower is better)
Translates to: GQVLRLSKVLTV*AKSLTFPDDAV
Trigger: GACAGCGTCATCAGGGAATGTCAGTGACTTGGCGCAGACTGTCAAAACCTTTGATAACCTTAAGACCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294016.8
ENST00000571889.1
ENST00000572288.1
ENST00000575550.5
CDS CAA 72 bp CCGCACGAAGGGCAGGTCTTAAGGTTATCAAAGGTTTaGACAGTCTGCGCCAAGTCACTGACATTCCCTGAT +
Preference number: 6 (lower is better)
Translates to: PHEGQVLRLSKV*TVCAKSLTFPD
Trigger: ATCAGGGAATGTCAGTGACTTGGCGCAGACTGTCAAAACCTTTGATAACCTTAAGACCTGCCCTTCGTGCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294016.8
ENST00000571889.1
ENST00000572288.1
ENST00000575550.5
CDS CAA 72 bp ATTCCTGTTTCGTCACAGTCGTCTTTCTCTATGGCTTaGCCAAATCGACCCCTTTCTTCGGCTTTGACGGGC +
Preference number: 6 (lower is better)
Translates to: IPVSSQSSFSMA*PNRPLSSALTG
Trigger: GCCCGTCAAAGCCGAAGAAAGGGGTCGATTTGGCAAAGCCATAGAGAAAGACGACTGTGACGAAACAGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CAA 90 bp GCGCCGCCTCACACACTCTTTGAAACGTTGAGCTTGGTGAGTTCGTaGGCTTCTTCTATTCCTGTTTCGTCACAGTCGTCTTTCTCTATG +
Preference number: 6 (lower is better)
Translates to: APPHTLFETLSLVSS*ASSIPVSSQSSFSM
Trigger: CATAGAGAAAGACGACTGTGACGAAACAGGAATAGAAGAAGCCAACGAACTCACCAAGCTCAACGTTTCAAAGAGTGTGTGAGGCGGCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS TCA 72 bp CCCCCAGACACAAACTCAGGTACAAAGGTAAGTGCATaGCGGTATAGAGCAAAAAGAGCACTTCGATGCACA +
Preference number: 6 (lower is better)
Translates to: PPDTNSGTKVSA*RYRAKRALRCT
Trigger: TGTGCATCGAAGTGCTCTTTTTGCTCTATACCGTCATGCACTTACCTTTGTACCTGAGTTTGTGTCTGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS CAA 72 bp CACACACTCTTTGAAACGTTGAGCTTGGTGAGTTCGTaGGCTTCTTCTATTCCTGTTTCGTCACAGTCGTCT +
Preference number: 6 (lower is better)
Translates to: HTLFETLSLVSS*ASSIPVSSQSS
Trigger: AGACGACTGTGACGAAACAGGAATAGAAGAAGCCAACGAACTCACCAAGCTCAACGTTTCAAAGAGTGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS TCA 72 bp TCTCCTCATCTCCCTGCTTCATTAAGTCATCGGCTATaGTTCTTGGCATCACGGAATGAATCATCCTCTCTT +
Preference number: 6 (lower is better)
Translates to: SPHLPASLSHRL*FLASRNESSSL
Trigger: AAGAGAGGATGATTCATTCCGTGATGCCAAGAATCATAGCCGATGACTTAATGAAGCAGGGAGATGAGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS TCA 72 bp ATTAAGTCATCGGCTATGATTCTTGGCATCACGGAATaGATCATCCTCTCTTTGAGGGCTTTTTCCACTTCC +
Preference number: 6 (lower is better)
Translates to: IKSSAMILGITE*IILSLRAFSTS
Trigger: GGAAGTGGAAAAAGCCCTCAAAGAGAGGATGATTCATTCCGTGATGCCAAGAATCATAGCCGATGACTTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294016.8
CDS TCA 72 bp TTGATGGTGTTCTTTGTAGCGCAACAGCTTAACTTCTaGGGAAGTTGGGCTTGTCTATTCTTTCTTCTGTTG +
Preference number: 6 (lower is better)
Translates to: LMVFFVAQQLNF*GSWACLFFLLL
Trigger: CAACAGAAGAAAGAATAGACAAGCCCAACTTCCTCAGAAGTTAAGCTGTTGCGCTACAAAGAACACCATCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574721.1