RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADCY7 (Homo sapiens)

Ensembl gene IDs: ENSG00000121281

Ensembl transcript IDs: ENST00000254235.7, ENST00000394697.7, ENST00000537579.5, ENST00000563677.1, ENST00000564044.5, ENST00000564965.5, ENST00000566433.6, ENST00000566761.2, ENST00000567277.6, ENST00000568731.1, ENST00000568930.1, ENST00000569265.1, ENST00000570187.1, ENST00000673801.1, ENST00000673973.1

Found 1356 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACGAGCAGGATGCAGACGAAGATCAGGCTGGCGCAGGCAAAGTCGTaGCGGGCCCGGGGGATGGGTGCCAGGCGGTACTCGCGCTCAAAG +
Preference number: 1 (lower is better)
Translates to: TSRMQTKIRLAQAKS*RARGMGARRYSRSK
Trigger: CTTTGAGCGCGAGTACCGCCTGGCACCCATCCCCCGGGCCCGCCACGACTTTGCCTGCGCCAGCCTGATCTTCGTCTGCATCCTGCTCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
3UTR GCA 90 bp CAGTATGCAGGTGCGGGAGGGGCTCACACAGGGCTCTTGTCTTGCTaGTCGCGGCCAGTAGGCCTGTCTCATTGCCAACAGGCAGCTCTG +
Preference number: 1 (lower is better)
Translates to: QYAGAGGAHTGLLSC*SRPVGLSHCQQAAL
Trigger: CAGAGCTGCCTGTTGGCAATGAGACAGGCCTACTGGCCGCGAGCAGCAAGACAAGAGCCCTGTGTGAGCCCCTCCCGCACCTGCATACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537579.5
ENST00000567277.6
3UTR CCA 90 bp CTGTGTCTCCACCCTCTCAGAGATAGTGCAGAGCGTCCCCCGAGCTaGGCAGCACCTCGAGAACTTGGTGGCAAAGCACAGGCCCAGCAC +
Preference number: 1 (lower is better)
Translates to: LCLHPLRDSAERPPS*AAPRELGGKAQAQH
Trigger: GTGCTGGGCCTGTGCTTTGCCACCAAGTTCTCGAGGTGCTGCCCAGCTCGGGGGACGCTCTGCACTATCTCTGAGAGGGTGGAGACACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
3UTR GCA 90 bp TGCAGGTGTAGTACGGGAGGGGCTCACACAGGGCTCTTGTCTTGCTaGTCGCGGCCAGTAGGCCTGTCTCATTGCCAACAGGCAGCTCTG +
Preference number: 1 (lower is better)
Translates to: CRCSTGGAHTGLLSC*SRPVGLSHCQQAAL
Trigger: CAGAGCTGCCTGTTGGCAATGAGACAGGCCTACTGGCCGCGAGCAGCAAGACAAGAGCCCTGTGTGAGCCCCTCCCGTACTACACCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673973.1
3UTR GCA 90 bp AGCTGCAGGTGTAGTACGGGAGGGGCTCACACAGGGCTCTTGTCTTaGTGCTCGCGGCCAGTAGGCCTGTCTCATTGCCAACAGGCAGCT +
Preference number: 1 (lower is better)
Translates to: SCRCSTGGAHTGLLS*CSRPVGLSHCQQAA
Trigger: AGCTGCCTGTTGGCAATGAGACAGGCCTACTGGCCGCGAGCAGCAAGACAAGAGCCCTGTGTGAGCCCCTCCCGTACTACACCTGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673973.1
3UTR CCA 90 bp GTGGGGCGGAGAGTCTTCTCCTGGGCTTGCTTCAGGGAAGGAGACTaGCTTCCCGGCCTTTTCGGAATCCAGCAGGAGCCCTCAGTTCAG +
Preference number: 1 (lower is better)
Translates to: VGRRVFSWACFREGD*LPGLFGIQQEPSVQ
Trigger: CTGAACTGAGGGCTCCTGCTGGATTCCGAAAAGGCCGGGAAGCCAGTCTCCTTCCCTGAAGCAAGCCCAGGAGAAGACTCTCCGCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673973.1
3UTR GCA 90 bp CATGCCTTTGGGATTGGCGTGGGGCGGAGAGTCTTCTCCTGGGCTTaGTTCAGGGAAGGAGACTGGCTTCCCGGCCTTTTCGGAATCCAG +
Preference number: 1 (lower is better)
Translates to: HAFGIGVGRRVFSWA*FREGDWLPGLFGIQ
Trigger: CTGGATTCCGAAAAGGCCGGGAAGCCAGTCTCCTTCCCTGAAGCAAGCCCAGGAGAAGACTCTCCGCCCCACGCCAATCCCAAAGGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR GCA 90 bp AAACAGTATGCAGGTGCGGGAGGGGCTCACACAGGGCTCTTGTCTTaGTGCTCGCGGCCAGTAGGCCTGTCTCATTGCCAACAGGCAGCT +
Preference number: 1 (lower is better)
Translates to: KQYAGAGGAHTGLLS*CSRPVGLSHCQQAA
Trigger: AGCTGCCTGTTGGCAATGAGACAGGCCTACTGGCCGCGAGCAGCAAGACAAGAGCCCTGTGTGAGCCCCTCCCGCACCTGCATACTGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537579.5
ENST00000567277.6
3UTR CCA 90 bp TGGGTGCCAGGCGGTACTCGCGCTCAAAGCCCTTCTCCAGGAAGATaGACCCAAAGGTGTAGAAGTCATCGGACTTGGAGCAGCAGGGCC +
Preference number: 1 (lower is better)
Translates to: WVPGGTRAQSPSPGR*TQRCRSHRTWSSRA
Trigger: GGCCCTGCTGCTCCAAGTCCGATGACTTCTACACCTTTGGGTCCATCTTCCTGGAGAAGGGCTTTGAGCGCGAGTACCGCCTGGCACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567277.6
ENST00000673973.1
3UTR GCA 90 bp CCTCCAGTGCAGGTCCAAAGAAGCCAACATGCACAGCCATCTGCATaGCTTTGGGATTGGCGTGGGGCGGAGAGTCTTCTCCTGGGCTTG +
Preference number: 1 (lower is better)
Translates to: PPVQVQRSQHAQPSA*LWDWRGAESLLLGL
Trigger: CAAGCCCAGGAGAAGACTCTCCGCCCCACGCCAATCCCAAAGGCATGCAGATGGCTGTGCATGTTGGCTTCTTTGGACCTGCACTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR CCA 90 bp TCTCCAGCTGGCCTGGAAACTGTTACAGACCAGGCACAGAGCTTCTaGCCTCCCCTGCGCATTATGGCTCAGTGGCTGCTTCGAGCCAGA +
Preference number: 1 (lower is better)
Translates to: SPAGLETVTDQAQSF*PPLRIMAQWLLRAR
Trigger: TCTGGCTCGAAGCAGCCACTGAGCCATAATGCGCAGGGGAGGCCAGAAGCTCTGTGCCTGGTCTGTAACAGTTTCCAGGCCAGCTGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR GCA 90 bp GCCTGGAAACTGTTACAGACCAGGCACAGAGCTTCTGGCCTCCCCTaGGCATTATGGCTCAGTGGCTGCTTCGAGCCAGAATCTGGTGCA +
Preference number: 1 (lower is better)
Translates to: AWKLLQTRHRASGLP*ALWLSGCFEPESGA
Trigger: TGCACCAGATTCTGGCTCGAAGCAGCCACTGAGCCATAATGCGCAGGGGAGGCCAGAAGCTCTGTGCCTGGTCTGTAACAGTTTCCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR CCA 90 bp GTCCAAAGAAGCCAACATGCACAGCCATCTGCATGCCTTTGGGATTaGCGTGGGGCGGAGAGTCTTCTCCTGGGCTTGCTTCAGGGAAGG +
Preference number: 1 (lower is better)
Translates to: VQRSQHAQPSACLWD*RGAESLLLGLLQGR
Trigger: CCTTCCCTGAAGCAAGCCCAGGAGAAGACTCTCCGCCCCACGCCAATCCCAAAGGCATGCAGATGGCTGTGCATGTTGGCTTCTTTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR CCA 90 bp GTGCAGGTCCAAAGAAGCCAACATGCACAGCCATCTGCATGCCTTTaGGATTGGCGTGGGGCGGAGAGTCTTCTCCTGGGCTTGCTTCAG +
Preference number: 1 (lower is better)
Translates to: VQVQRSQHAQPSACL*DWRGAESLLLGLLQ
Trigger: CTGAAGCAAGCCCAGGAGAAGACTCTCCGCCCCACGCCAATCCCAAAGGCATGCAGATGGCTGTGCATGTTGGCTTCTTTGGACCTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR CCA 90 bp AAGAAGCCAACATGCACAGCCATCTGCATGCCTTTGGGATTGGCGTaGGGCGGAGAGTCTTCTCCTGGGCTTGCTTCAGGGAAGGAGACT +
Preference number: 1 (lower is better)
Translates to: KKPTCTAICMPLGLA*GGESSPGLASGKET
Trigger: AGTCTCCTTCCCTGAAGCAAGCCCAGGAGAAGACTCTCCGCCCCACGCCAATCCCAAAGGCATGCAGATGGCTGTGCATGTTGGCTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR CCA 90 bp GACCAGGCACAGAGCTTCTGGCCTCCCCTGCGCATTATGGCTCAGTaGCTGCTTCGAGCCAGAATCTGGTGCATGTGTCTGAGAAATCCT +
Preference number: 1 (lower is better)
Translates to: DQAQSFWPPLRIMAQ*LLRARIWCMCLRNP
Trigger: AGGATTTCTCAGACACATGCACCAGATTCTGGCTCGAAGCAGCCACTGAGCCATAATGCGCAGGGGAGGCCAGAAGCTCTGTGCCTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR CCA 90 bp GATCTCAAAGTCAGCCCCGAACCAGTGAACATTCTCCAGCTGGCCTaGAAACTGTTACAGACCAGGCACAGAGCTTCTGGCCTCCCCTGC +
Preference number: 1 (lower is better)
Translates to: DLKVSPEPVNILQLA*KLLQTRHRASGLPC
Trigger: GCAGGGGAGGCCAGAAGCTCTGTGCCTGGTCTGTAACAGTTTCCAGGCCAGCTGGAGAATGTTCACTGGTTCGGGGCTGACTTTGAGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR GCA 90 bp CATGTGTCTGAGAAATCCTCCAGTGCAGGTCCAAAGAAGCCAACATaGACAGCCATCTGCATGCCTTTGGGATTGGCGTGGGGCGGAGAG +
Preference number: 1 (lower is better)
Translates to: HVSEKSSSAGPKKPT*TAICMPLGLAWGGE
Trigger: CTCTCCGCCCCACGCCAATCCCAAAGGCATGCAGATGGCTGTGCATGTTGGCTTCTTTGGACCTGCACTGGAGGATTTCTCAGACACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR GCA 90 bp CCAGAATGCTTGCCTCACAAGCTGCCTCATTCAAAGGCAAGGCTCTaGTGCTCCCCGCCTTCTTGCTGTGACCACATTCCTCAGGACTCT +
Preference number: 1 (lower is better)
Translates to: PECLPHKLPHSKARL*CSPPSCCDHIPQDS
Trigger: AGAGTCCTGAGGAATGTGGTCACAGCAAGAAGGCGGGGAGCAGCAGAGCCTTGCCTTTGAATGAGGCAGCTTGTGAGGCAAGCATTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR CCA 90 bp CCTCCCCTGCGCATTATGGCTCAGTGGCTGCTTCGAGCCAGAATCTaGTGCATGTGTCTGAGAAATCCTCCAGTGCAGGTCCAAAGAAGC +
Preference number: 1 (lower is better)
Translates to: PPLRIMAQWLLRARI*CMCLRNPPVQVQRS
Trigger: GCTTCTTTGGACCTGCACTGGAGGATTTCTCAGACACATGCACCAGATTCTGGCTCGAAGCAGCCACTGAGCCATAATGCGCAGGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR TCA 90 bp TGCCAGGAGAGCCCCCGCCGGGCAGCCCTGGTCACTGCTAGATCTTaGGAGCACAGATTTCAGTATAGTATTCATGTGAAACCAGCCCTT +
Preference number: 1 (lower is better)
Translates to: CQESPRRAALVTARS*EHRFQYSIHVKPAL
Trigger: AAGGGCTGGTTTCACATGAATACTATACTGAAATCTGTGCTCTCAAGATCTAGCAGTGACCAGGGCTGCCCGGCGGGGGCTCTCCTGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR GCA 90 bp CCCCTGCGCATTATGGCTCAGTGGCTGCTTCGAGCCAGAATCTGGTaGATGTGTCTGAGAAATCCTCCAGTGCAGGTCCAAAGAAGCCAA +
Preference number: 1 (lower is better)
Translates to: PLRIMAQWLLRARIW*MCLRNPPVQVQRSQ
Trigger: TTGGCTTCTTTGGACCTGCACTGGAGGATTTCTCAGACACATGCACCAGATTCTGGCTCGAAGCAGCCACTGAGCCATAATGCGCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR GCA 90 bp GAATGCTTGCCTCACAAGCTGCCTCATTCAAAGGCAAGGCTCTGCTaGTCCCCGCCTTCTTGCTGTGACCACATTCCTCAGGACTCTATC +
Preference number: 1 (lower is better)
Translates to: ECLPHKLPHSKARLC*SPPSCCDHIPQDSI
Trigger: GATAGAGTCCTGAGGAATGTGGTCACAGCAAGAAGGCGGGGAGCAGCAGAGCCTTGCCTTTGAATGAGGCAGCTTGTGAGGCAAGCATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR TCA 90 bp CTGGCACCTCAGGGAACAAAGATCTCAAAGTCAGCCCCGAACCAGTaGACATTCTCCAGCTGGCCTGGAAACTGTTACAGACCAGGCACA +
Preference number: 1 (lower is better)
Translates to: LAPQGTKISKSAPNQ*TFSSWPGNCYRPGT
Trigger: TGTGCCTGGTCTGTAACAGTTTCCAGGCCAGCTGGAGAATGTTCACTGGTTCGGGGCTGACTTTGAGATCTTTGTTCCCTGAGGTGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR GCA 90 bp CCTTACTTTCAAAGCACCTCTCTCCAGAATGCTTGCCTCACAAGCTaGCTCATTCAAAGGCAAGGCTCTGCTGCTCCCCGCCTTCTTGCT +
Preference number: 1 (lower is better)
Translates to: PYFQSTSLQNACLTS*LIQRQGSAAPRLLA
Trigger: AGCAAGAAGGCGGGGAGCAGCAGAGCCTTGCCTTTGAATGAGGCAGCTTGTGAGGCAAGCATTCTGGAGAGAGGTGCTTTGAAAGTAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR GCA 90 bp GAGGTGAAAGGCCGCACCTTACTTTCAAAGCACCTCTCTCCAGAATaGTTGCCTCACAAGCTGCCTCATTCAAAGGCAAGGCTCTGCTGC +
Preference number: 1 (lower is better)
Translates to: EVKGRTLLSKHLSPE*LPHKLPHSKARLCC
Trigger: GCAGCAGAGCCTTGCCTTTGAATGAGGCAGCTTGTGAGGCAAGCATTCTGGAGAGAGGTGCTTTGAAAGTAAGGTGCGGCCTTTCACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR TCA 90 bp TTATGGCTCAGTGGCTGCTTCGAGCCAGAATCTGGTGCATGTGTCTaGGAAATCCTCCAGTGCAGGTCCAAAGAAGCCAACATGCACAGC +
Preference number: 1 (lower is better)
Translates to: LWLSGCFEPESGACV*EILQCRSKEANMHS
Trigger: GCTGTGCATGTTGGCTTCTTTGGACCTGCACTGGAGGATTTCTCAGACACATGCACCAGATTCTGGCTCGAAGCAGCCACTGAGCCATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR TCA 90 bp TCTTGCTGTGACCACATTCCTCAGGACTCTATCCCCACAGCCAGCTaGCCCCATAAGCTGATGCTAGACAGTAGTCCTCCTTACATGTCA +
Preference number: 1 (lower is better)
Translates to: SCCDHIPQDSIPTAS*PHKLMLDSSPPYMS
Trigger: TGACATGTAAGGAGGACTACTGTCTAGCATCAGCTTATGGGGTCAGCTGGCTGTGGGGATAGAGTCCTGAGGAATGTGGTCACAGCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR GCA 90 bp CTAATGTGTTTCTATGTTATATTAGCAACAGAAACCTTCCTGACTTaGCAGGAGAGCCCCCGCCGGGCAGCCCTGGTCACTGCTAGATCT +
Preference number: 1 (lower is better)
Translates to: LMCFYVILATETFLT*QESPRRAALVTARS
Trigger: AGATCTAGCAGTGACCAGGGCTGCCCGGCGGGGGCTCTCCTGGCAAGTCAGGAAGGTTTCTGTTGCTAATATAACATAGAAACACATTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR CCA 90 bp ACTGAGGTGGAAGTCTGTTTTCATCATGTGCTAAAGTTGCCTGCCTaGCACCTCAGGGAACAAAGATCTCAAAGTCAGCCCCGAACCAGT +
Preference number: 1 (lower is better)
Translates to: TEVEVCFHHVLKLPA*HLREQRSQSQPRTS
Trigger: ACTGGTTCGGGGCTGACTTTGAGATCTTTGTTCCCTGAGGTGCCAGGCAGGCAACTTTAGCACATGATGAAAACAGACTTCCACCTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR CCA 90 bp TTAATTTGCAGCCCGGGGCAACTCATCCCAGGACCCCAACAAGTCTaGTCAGTCACCCAATCTGCAACCCTGTATAATCATCTTGTAAAG +
Preference number: 1 (lower is better)
Translates to: LICSPGQLIPGPQQV*SVTQSATLYNHLVK
Trigger: CTTTACAAGATGATTATACAGGGTTGCAGATTGGGTGACTGACCAGACTTGTTGGGGTCCTGGGATGAGTTGCCCCGGGCTGCAAATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR GCA 90 bp TGTAGAACTTTACGGGGTTCATGGGGACACCTAGCTAAGAATCCCTaGTATGTAGGGAAACTGAGTGCATTAGAAATCCTGGCGATGCTC +
Preference number: 1 (lower is better)
Translates to: CRTLRGSWGHLAKNP*YVGKLSALEILAML
Trigger: GAGCATCGCCAGGATTTCTAATGCACTCAGTTTCCCTACATAGCAGGGATTCTTAGCTAGGTGTCCCCATGAACCCCGTAAAGTTCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR TCA 90 bp AGTAAGATACAGTTGAAGGACGGCAGGGGAGAACGCAAAGATGTGTaGGTAATCAAGGAAGAGGTGAAAGGCCGCACCTTACTTTCAAAG +
Preference number: 1 (lower is better)
Translates to: SKIQLKDGRGERKDV*VIKEEVKGRTLLSK
Trigger: CTTTGAAAGTAAGGTGCGGCCTTTCACCTCTTCCTTGATTACTCACACATCTTTGCGTTCTCCCCTGCCGTCCTTCAACTGTATCTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR CCA 90 bp AAGGCTCCTGTATGCAAGACTTTGTGTAGAACTTTACGGGGTTCATaGGGACACCTAGCTAAGAATCCCTGCTATGTAGGGAAACTGAGT +
Preference number: 1 (lower is better)
Translates to: KAPVCKTLCRTLRGS*GHLAKNPCYVGKLS
Trigger: ACTCAGTTTCCCTACATAGCAGGGATTCTTAGCTAGGTGTCCCCATGAACCCCGTAAAGTTCTACACAAAGTCTTGCATACAGGAGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR TCA 90 bp CAGCAAGTTCTTCTATTCATACTGATTCCACTTATGTGCAGCACATaGGAGCTGCCACTAGTCTACCCAGCACCTTTGTGCAAATTAGAA +
Preference number: 1 (lower is better)
Translates to: QQVLLFILIPLMCST*ELPLVYPAPLCKLE
Trigger: TTCTAATTTGCACAAAGGTGCTGGGTAGACTAGTGGCAGCTCTCATGTGCTGCACATAAGTGGAATCAGTATGAATAGAAGAACTTGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR GCA 90 bp CAAATATTCCAAGAGTACAAATATGCTGACCTCAGAGAGGCCCAGTaGACTAATGTGTTTCTATGTTATATTAGCAACAGAAACCTTCCT +
Preference number: 1 (lower is better)
Translates to: QIFQEYKYADLREAQ*TNVFLCYISNRNLP
Trigger: AGGAAGGTTTCTGTTGCTAATATAACATAGAAACACATTAGTGCACTGGGCCTCTCTGAGGTCAGCATATTTGTACTCTTGGAATATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CCA 90 bp GAGCTGGGCAGCACCTCGAGAACTTGGTGGCAAAGCACAGGCCCAGCACCAGCCGCGCAGGCAAAGTCGTaGCGGGCCCGGGGGATGGGT +
Preference number: 2 (lower is better)
Translates to: ELGSTSRTWWQSTGPAPAAQAKS*RARGMG
Trigger: ACCCATCCCCCGGGCCCGCCACGACTTTGCCTGCGC...GGCTGGTGCTGGGCCTGTGCTTTGCCACCAAGTTCTCGAGGTGCTGCCCAGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
3UTR-3UTR GCA 90 bp ATGGGTGCCAGGCGGTACTCGCGCTCAAAGCCCTTCTCCAGGAAGATGGACCCAGGCCCGGGGGATGGGTaGCAGGCGGTACTCGCGCTC +
Preference number: 2 (lower is better)
Translates to: MGARRYSRSKPFSRKMDPGPGDG*QAVLAL
Trigger: GAGCGCGAGTACCGCCTGGCACCCATCCCCCGGGCC...TGGGTCCATCTTCCTGGAGAAGGGCTTTGAGCGCGAGTACCGCCTGGCACCCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
3UTR-3UTR TCA 90 bp GTCCCCCGAGCTGGGCAGCACCTCGAGAACTTGGTGGCAAAGCACAGGCCCAGCAGGGCCTCGTGGAGCTaGGCCCCTCAATGGCTGACA +
Preference number: 2 (lower is better)
Translates to: VPRAGQHLENLVAKHRPSRASWS*APQWLT
Trigger: TGTCAGCCATTGAGGGGCTCAGCTCCACGAGGCCCT...GCTGGGCCTGTGCTTTGCCACCAAGTTCTCGAGGTGCTGCCCAGCTCGGGGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000567277.6
ENST00000673973.1
3UTR-3UTR GCA 90 bp GAGCAGGACATGGACGAGCAGGATGCAGACGAAGATCAGGCTGGCGCAGGCAAAGGCCCGGGGGATGGGTaGCAGGCGGTACTCGCGCTC +
Preference number: 2 (lower is better)
Translates to: EQDMDEQDADEDQAGAGKGPGDG*QAVLAL
Trigger: GAGCGCGAGTACCGCCTGGCACCCATCCCCCGGGCC...TTTGCCTGCGCCAGCCTGATCTTCGTCTGCATCCTGCTCGTCCATGTCCTGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
3UTR-3UTR GCA 90 bp GATGGCCACAGTGAGCAGGCTGCCGATGGTCAGGACGGCCAGGGTCAGCCTCAGGAAGGACACACCCAGTaGCGCCGTCCTGGGCATGAG +
Preference number: 2 (lower is better)
Translates to: DGHSEQAADGQDGQGQPQEGHTQ*RRPGHE
Trigger: CTCATGCCCAGGACGGCGGCACTGGGTGTGTCCTTC...CTGAGGCTGACCCTGGCCGTCCTGACCATCGGCAGCCTGCTCACTGTGGCCATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
3UTR-3UTR CCA 90 bp AGGGCTCTTGTCTTGCTGCTCGCGGCCAGTAGGCCTGTCTCATTGCCAACAGGCGCGCAGGCAAAGTCGTaGCGGGCCCGGGGGATGGGT +
Preference number: 2 (lower is better)
Translates to: RALVLLLAASRPVSLPTGAQAKS*RARGMG
Trigger: ACCCATCCCCCGGGCCCGCCACGACTTTGCCTGCGC...GCCTGTTGGCAATGAGACAGGCCTACTGGCCGCGAGCAGCAAGACAAGAGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
3UTR-3UTR TCA 90 bp CAGGTTGATGATGGCCACAGTGAGCAGGCTGCCGATGGTCAGGACGGCCAGGGTCCGCCGTCCTGGGCATaGGCAGGACATGGACGAGCA +
Preference number: 2 (lower is better)
Translates to: QVDDGHSEQAADGQDGQGPPSWA*AGHGRA
Trigger: TGCTCGTCCATGTCCTGCTCATGCCCAGGACGGCGG...ACCCTGGCCGTCCTGACCATCGGCAGCCTGCTCACTGTGGCCATCATCAACCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
3UTR-3UTR TCA 90 bp AGGTTGATGATGGCCACAGTGAGCAGGCTGCCGATGGTCAGGACGGCCAGGGTCCCGCCGTCCTGGGCATaGGCAGGACATGGACGAGCA +
Preference number: 2 (lower is better)
Translates to: RLMMATVSRLPMVRTARVPPSWA*AGHGRA
Trigger: TGCTCGTCCATGTCCTGCTCATGCCCAGGACGGCGG...GACCCTGGCCGTCCTGACCATCGGCAGCCTGCTCACTGTGGCCATCATCAACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
3UTR-3UTR CCA 90 bp GGGCTGTGTCTCCACCCTCTCAGAGATAGTGCAGAGCGTCCCCCGAGCTGGGCAGAGCGTCCCCCGAGCTaGGCAGCACCTCGAGAACTT +
Preference number: 2 (lower is better)
Translates to: GLCLHPLRDSAERPPSWAERPPS*AAPREL
Trigger: AAGTTCTCGAGGTGCTGCCCAGCTCGGGGGACGCTC...TGCCCAGCTCGGGGGACGCTCTGCACTATCTCTGAGAGGGTGGAGACACAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
3UTR-3UTR GCA 90 bp CCCCGAGCTGGGCAGCACCTCGAGAACTTGGTGGCAAAGCACAGGCCCAGCACCGCACAGCCATCTGCATaGCTTTGGGATTGGCGTGGG +
Preference number: 2 (lower is better)
Translates to: PRAGQHLENLVAKHRPSTAQPSA*LWDWRG
Trigger: CCCACGCCAATCCCAAAGGCATGCAGATGGCTGTGC...GGTGCTGGGCCTGTGCTTTGCCACCAAGTTCTCGAGGTGCTGCCCAGCTCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673973.1
3UTR-3UTR CCA 90 bp CGAGCTGGGCAGCACCTCGAGAACTTGGTGGCAAAGCACAGGCCCAGCACCAGCCCATCTGCATGCCTTTaGGATTGGCGTGGGGCGGAG +
Preference number: 2 (lower is better)
Translates to: RAGQHLENLVAKHRPSTSPSACL*DWRGAE
Trigger: CTCCGCCCCACGCCAATCCCAAAGGCATGCAGATGG...GCTGGTGCTGGGCCTGTGCTTTGCCACCAAGTTCTCGAGGTGCTGCCCAGCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673973.1
3UTR-3UTR TCA 90 bp AGCAACAGAAACCTTCCTGACTTGCCAGGAGAGCCCCCGCCGGGCAGCCCTGGTCCCGCCTTCTTGCTGTaGCCACATTCCTCAGGACTC +
Preference number: 2 (lower is better)
Translates to: SNRNLPDLPGEPPPGSPGPAFLL*PHSSGL
Trigger: GAGTCCTGAGGAATGTGGTCACAGCAAGAAGGCGGG...ACCAGGGCTGCCCGGCGGGGGCTCTCCTGGCAAGTCAGGAAGGTTTCTGTTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp AGGGCTCTTGTCTTGCTGCTCGCGGCCAGTAGGCCTGTCTCATTGCCAACAGGCGAAGGACACACCCAGTaGCGCCGTCCTGGGCATGAG +
Preference number: 2 (lower is better)
Translates to: RALVLLLAASRPVSLPTGEGHTQ*RRPGHE
Trigger: CTCATGCCCAGGACGGCGGCACTGGGTGTGTCCTTC...GCCTGTTGGCAATGAGACAGGCCTACTGGCCGCGAGCAGCAAGACAAGAGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
3UTR-3UTR CCA 90 bp AGCAACAGAAACCTTCCTGACTTGCCAGGAGAGCCCCCGCCGGGCAGCCCTGGTCAGGCACAGAGCTTCTaGCCTCCCCTGCGCATTATG +
Preference number: 2 (lower is better)
Translates to: SNRNLPDLPGEPPPGSPGQAQSF*PPLRIM
Trigger: CATAATGCGCAGGGGAGGCCAGAAGCTCTGTGCCTG...ACCAGGGCTGCCCGGCGGGGGCTCTCCTGGCAAGTCAGGAAGGTTTCTGTTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CCA 90 bp CCCCGAGCTGGGCAGCACCTCGAGAACTTGGTGGCAAAGCACAGGCCCAGCACCACCTCGAGAACTTGGTaGCAAAGCACAGGCCCAGCA +
Preference number: 2 (lower is better)
Translates to: PRAGQHLENLVAKHRPSTTSRTW*QSTGPA
Trigger: TGCTGGGCCTGTGCTTTGCCACCAAGTTCTCGAGGT...GGTGCTGGGCCTGTGCTTTGCCACCAAGTTCTCGAGGTGCTGCCCAGCTCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
3UTR-3UTR CCA 90 bp GATGGCCACAGTGAGCAGGCTGCCGATGGTCAGGACGGCCAGGGTCAGCCTCAGACCTCGAGAACTTGGTaGCAAAGCACAGGCCCAGCA +
Preference number: 2 (lower is better)
Translates to: DGHSEQAADGQDGQGQPQTSRTW*QSTGPA
Trigger: TGCTGGGCCTGTGCTTTGCCACCAAGTTCTCGAGGT...CTGAGGCTGACCCTGGCCGTCCTGACCATCGGCAGCCTGCTCACTGTGGCCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
3UTR-3UTR CCA 90 bp AACGGCTCAGCATTTGTGAGGGGGCGGGCTTCCCAGATCCAGGAGCCTCTGCATCCATCTGCATGCCTTTaGGATTGGCGTGGGGCGGAG +
Preference number: 2 (lower is better)
Translates to: NGSAFVRGRASQIQEPLHPSACL*DWRGAE
Trigger: CTCCGCCCCACGCCAATCCCAAAGGCATGCAGATGG...ATGCAGAGGCTCCTGGATCTGGGAAGCCCGCCCCCTCACAAATGCTGAGCCGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CCA 90 bp AGCAGGGGCTGTGTCTCCACCCTCTCAGAGATAGTGCAGAGCGTCCCCCGAGCTCAGGCACAGAGCTTCTaGCCTCCCCTGCGCATTATG +
Preference number: 2 (lower is better)
Translates to: SRGCVSTLSEIVQSVPRAQAQSF*PPLRIM
Trigger: CATAATGCGCAGGGGAGGCCAGAAGCTCTGTGCCTG...AGCTCGGGGGACGCTCTGCACTATCTCTGAGAGGGTGGAGACACAGCCCCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000673973.1
3UTR-3UTR CCA 90 bp GAGAACTTGGTGGCAAAGCACAGGCCCAGCACCAGCCCCAGTACACAGGCCACCAGACGAAGATCAGGCTaGCGCAGGCAAAGTCGTGGC +
Preference number: 2 (lower is better)
Translates to: ENLVAKHRPSTSPSTQATRRRSG*RRQSRG
Trigger: GCCACGACTTTGCCTGCGCCAGCCTGATCTTCGTCT...GGTGGCCTGTGTACTGGGGCTGGTGCTGGGCCTGTGCTTTGCCACCAAGTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
3UTR-3UTR CCA 90 bp AGGTTGATGATGGCCACAGTGAGCAGGCTGCCGATGGTCAGGACGGCCAGGGTCAGACGAAGATCAGGCTaGCGCAGGCAAAGTCGTGGC +
Preference number: 2 (lower is better)
Translates to: RLMMATVSRLPMVRTARVRRRSG*RRQSRG
Trigger: GCCACGACTTTGCCTGCGCCAGCCTGATCTTCGTCT...GACCCTGGCCGTCCTGACCATCGGCAGCCTGCTCACTGTGGCCATCATCAACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
3UTR CAA 90 bp GCATGCCTTTGGGATTGGCGTGGGGCGGAGAGTCTTCTCCTGGGCTaGCTTCAGGGAAGGAGACTGGCTTCCCGGCCTTTTCGGAATCCA +
Preference number: 2 (lower is better)
Translates to: ACLWDWRGAESLLLG*LQGRRLASRPFRNP
Trigger: TGGATTCCGAAAAGGCCGGGAAGCCAGTCTCCTTCCCTGAAGCAAGCCCAGGAGAAGACTCTCCGCCCCACGCCAATCCCAAAGGCATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR TCA 90 bp CAACATGCACAGCCATCTGCATGCCTTTGGGATTGGCGTGGGGCGGAGAGTCTTAGGGCCTCGTGGAGCTaGGCCCCTCAATGGCTGACA +
Preference number: 2 (lower is better)
Translates to: QHAQPSACLWDWRGAESLRASWS*APQWLT
Trigger: TGTCAGCCATTGAGGGGCTCAGCTCCACGAGGCCCT...AAGACTCTCCGCCCCACGCCAATCCCAAAGGCATGCAGATGGCTGTGCATGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673973.1
3UTR-3UTR GCA 90 bp GTTCCCTCCACCGCCACCCCCGCACTTAGCTGTACTCTTAATTTGCAGCCCGGGTCAAAGGCAAGGCTCTaGTGCTCCCCGCCTTCTTGC +
Preference number: 2 (lower is better)
Translates to: VPSTATPALSCTLNLQPGSKARL*CSPPSC
Trigger: GCAAGAAGGCGGGGAGCAGCAGAGCCTTGCCTTTGA...CCCGGGCTGCAAATTAAGAGTACAGCTAAGTGCGGGGGTGGCGGTGGAGGGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CCA 90 bp AACGGCTCAGCATTTGTGAGGGGGCGGGCTTCCCAGATCCAGGAGCCTCTGCATGCATGCCTTTGGGATTaGCGTGGGGCGGAGAGTCTT +
Preference number: 2 (lower is better)
Translates to: NGSAFVRGRASQIQEPLHACLWD*RGAESL
Trigger: AAGACTCTCCGCCCCACGCCAATCCCAAAGGCATGC...ATGCAGAGGCTCCTGGATCTGGGAAGCCCGCCCCCTCACAAATGCTGAGCCGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CCA 90 bp CCCCGAGCTGGGCAGCACCTCGAGAACTTGGTGGCAAAGCACAGGCCCAGCACCATTCTCCAGCTGGCCTaGAAACTGTTACAGACCAGG +
Preference number: 2 (lower is better)
Translates to: PRAGQHLENLVAKHRPSTILQLA*KLLQTR
Trigger: CCTGGTCTGTAACAGTTTCCAGGCCAGCTGGAGAAT...GGTGCTGGGCCTGTGCTTTGCCACCAAGTTCTCGAGGTGCTGCCCAGCTCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673973.1
3UTR-3UTR CCA 90 bp CACCTGCCCTTCCTCGGGCTGATAAAGCCACACGACACAGCACAGGCAGACAGGTTGTCACCGATAAAGTaGGCAGCCACGTGGGCTGGC +
Preference number: 2 (lower is better)
Translates to: HLPFLGLIKPHDTAQADRLSPIK*AATWAG
Trigger: GCCAGCCCACGTGGCTGCCCACTTTATCGGTGACAA...CCTGTCTGCCTGTGCTGTGTCGTGTGGCTTTATCAGCCCGAGGAAGGGCAGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673973.1
3UTR-3UTR GCA 90 bp GTTCCCTCCACCGCCACCCCCGCACTTAGCTGTACTCTTAATTTGCAGCCCGGGAGATCCAGGAGCCTCTaGATGCACCCATGCGGAGTA +
Preference number: 2 (lower is better)
Translates to: VPSTATPALSCTLNLQPGRSRSL*MHPCGV
Trigger: TACTCCGCATGGGTGCATGCAGAGGCTCCTGGATCT...CCCGGGCTGCAAATTAAGAGTACAGCTAAGTGCGGGGGTGGCGGTGGAGGGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp GTCTTGCTGCTCGCGGCCAGTAGGCCTGTCTCATTGCCAACAGGCAGCTCTGGACATGGACGAGCAGGATaGAGACGAAGATCAGGCTGG +
Preference number: 2 (lower is better)
Translates to: VLLLAASRPVSLPTGSSGHGRAG*RRRSGW
Trigger: CCAGCCTGATCTTCGTCTGCATCCTGCTCGTCCATG...TCCAGAGCTGCCTGTTGGCAATGAGACAGGCCTACTGGCCGCGAGCAGCAAGAC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
3UTR-3UTR CCA 90 bp TGCTCCCCGCCTTCTTGCTGTGACCACATTCCTCAGGACTCTATCCCCACAGCCCTCCCCTGCGCATTATaGCTCAGTGGCTGCTTCGAG +
Preference number: 2 (lower is better)
Translates to: CSPPSCCDHIPQDSIPTALPCAL*LSGCFE
Trigger: CTCGAAGCAGCCACTGAGCCATAATGCGCAGGGGAG...GGCTGTGGGGATAGAGTCCTGAGGAATGTGGTCACAGCAAGAAGGCGGGGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CCA 90 bp AGAAGCCAACATGCACAGCCATCTGCATGCCTTTGGGATTGGCGTGGGGCGGAGCAGGCACAGAGCTTCTaGCCTCCCCTGCGCATTATG +
Preference number: 2 (lower is better)
Translates to: RSQHAQPSACLWDWRGAEQAQSF*PPLRIM
Trigger: CATAATGCGCAGGGGAGGCCAGAAGCTCTGTGCCTG...CTCCGCCCCACGCCAATCCCAAAGGCATGCAGATGGCTGTGCATGTTGGCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CCA 90 bp TTGTCTTGCTGCTCGCGGCCAGTAGGCCTGTCTCATTGCCAACAGGCAGCTCTGGGCAGCTCTGGAACTTaGAAAGGCATCAGGGGCAGG +
Preference number: 2 (lower is better)
Translates to: LSCCSRPVGLSHCQQAALGSSGT*KGIRGR
Trigger: CCTGCCCCTGATGCCTTTCCAAGTTCCAGAGCTGCC...CAGAGCTGCCTGTTGGCAATGAGACAGGCCTACTGGCCGCGAGCAGCAAGACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
3UTR-3UTR CCA 90 bp TTGTCTTGCTGCTCGCGGCCAGTAGGCCTGTCTCATTGCCAACAGGCAGCTCTGAGAAGTCATCGGACTTaGAGCAGCAGGGCCTCGTGG +
Preference number: 2 (lower is better)
Translates to: LSCCSRPVGLSHCQQAALRSHRT*SSRASW
Trigger: CCACGAGGCCCTGCTGCTCCAAGTCCGATGACTTCT...CAGAGCTGCCTGTTGGCAATGAGACAGGCCTACTGGCCGCGAGCAGCAAGACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567277.6
ENST00000673973.1
3UTR CAA 90 bp GGTCCAAAGAAGCCAACATGCACAGCCATCTGCATGCCTTTGGGATaGGCGTGGGGCGGAGAGTCTTCTCCTGGGCTTGCTTCAGGGAAG +
Preference number: 2 (lower is better)
Translates to: GPKKPTCTAICMPLG*AWGGESSPGLASGK
Trigger: CTTCCCTGAAGCAAGCCCAGGAGAAGACTCTCCGCCCCACGCCAATCCCAAAGGCATGCAGATGGCTGTGCATGTTGGCTTCTTTGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR TCA 90 bp AGCAACAGAAACCTTCCTGACTTGCCAGGAGAGCCCCCGCCGGGCAGCCCTGGTACCAGAATGCCTCTGTaGGAAATGCTGTCATTGCCA +
Preference number: 2 (lower is better)
Translates to: SNRNLPDLPGEPPPGSPGTRMPL*EMLSLP
Trigger: TGGCAATGACAGCATTTCTCACAGAGGCATTCTGGT...ACCAGGGCTGCCCGGCGGGGGCTCTCCTGGCAAGTCAGGAAGGTTTCTGTTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR TCA 90 bp AGGACATGGACGAGCAGGATGCAGACGAAGATCAGGCTGGCGCAGGCAAAGTCGGAGCCCCTCAATGGCTaGCAGCATCTCGTCATCGTA +
Preference number: 2 (lower is better)
Translates to: RTWTSRMQTKIRLAQAKSEPLNG*QHLVIV
Trigger: TACGATGACGAGATGCTGTCAGCCATTGAGGGGCTC...CGACTTTGCCTGCGCCAGCCTGATCTTCGTCTGCATCCTGCTCGTCCATGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567277.6
ENST00000673973.1
3UTR-3UTR GCA 90 bp AGAAGCCAACATGCACAGCCATCTGCATGCCTTTGGGATTGGCGTGGGGCGGAGGAGAAATGCTGTCATTaGCAGGCCCACCAGGGAGAG +
Preference number: 2 (lower is better)
Translates to: RSQHAQPSACLWDWRGAEEKCCH*QAHQGE
Trigger: CTCTCCCTGGTGGGCCTGGCAATGACAGCATTTCTC...CTCCGCCCCACGCCAATCCCAAAGGCATGCAGATGGCTGTGCATGTTGGCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp CACCTGCCCTTCCTCGGGCTGATAAAGCCACACGACACAGCACAGGCAGACAGGTGCCTCTGTGAGAAATaGTGTCATTGCCAGGCCCAC +
Preference number: 2 (lower is better)
Translates to: HLPFLGLIKPHDTAQADRCLCEK*CHCQAH
Trigger: GTGGGCCTGGCAATGACAGCATTTCTCACAGAGGCA...CCTGTCTGCCTGTGCTGTGTCGTGTGGCTTTATCAGCCCGAGGAAGGGCAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp AACGGCTCAGCATTTGTGAGGGGGCGGGCTTCCCAGATCCAGGAGCCTCTGCATGCTTGCCTCACAAGCTaGCTCATTCAAAGGCAAGGC +
Preference number: 2 (lower is better)
Translates to: NGSAFVRGRASQIQEPLHACLTS*LIQRQG
Trigger: GCCTTGCCTTTGAATGAGGCAGCTTGTGAGGCAAGC...ATGCAGAGGCTCCTGGATCTGGGAAGCCCGCCCCCTCACAAATGCTGAGCCGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp TTGTCTTGCTGCTCGCGGCCAGTAGGCCTGTCTCATTGCCAACAGGCAGCTCTGCATGGACGAGCAGGATaGAGACGAAGATCAGGCTGG +
Preference number: 2 (lower is better)
Translates to: LSCCSRPVGLSHCQQAALHGRAG*RRRSGW
Trigger: CCAGCCTGATCTTCGTCTGCATCCTGCTCGTCCATG...CAGAGCTGCCTGTTGGCAATGAGACAGGCCTACTGGCCGCGAGCAGCAAGACAA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
3UTR-3UTR CCA 90 bp GTTCCCTCCACCGCCACCCCCGCACTTAGCTGTACTCTTAATTTGCAGCCCGGGGGACCCCAACAAGTCTaGTCAGTCACCCAATCTGCA +
Preference number: 2 (lower is better)
Translates to: VPSTATPALSCTLNLQPGGPQQV*SVTQSA
Trigger: TGCAGATTGGGTGACTGACCAGACTTGTTGGGGTCC...CCCGGGCTGCAAATTAAGAGTACAGCTAAGTGCGGGGGTGGCGGTGGAGGGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR CAA 90 bp AGTGCAGGTCCAAAGAAGCCAACATGCACAGCCATCTGCATGCCTTaGGGATTGGCGTGGGGCGGAGAGTCTTCTCCTGGGCTTGCTTCA +
Preference number: 2 (lower is better)
Translates to: SAGPKKPTCTAICMP*GLAWGGESSPGLAS
Trigger: TGAAGCAAGCCCAGGAGAAGACTCTCCGCCCCACGCCAATCCCAAAGGCATGCAGATGGCTGTGCATGTTGGCTTCTTTGGACCTGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR TCA 90 bp AGAAGCCAACATGCACAGCCATCTGCATGCCTTTGGGATTGGCGTGGGGCGGAGTCTGGTGCATGTGTCTaGGAAATCCTCCAGTGCAGG +
Preference number: 2 (lower is better)
Translates to: RSQHAQPSACLWDWRGAESGACV*EILQCR
Trigger: CCTGCACTGGAGGATTTCTCAGACACATGCACCAGA...CTCCGCCCCACGCCAATCCCAAAGGCATGCAGATGGCTGTGCATGTTGGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR TCA 90 bp AGCAACAGAAACCTTCCTGACTTGCCAGGAGAGCCCCCGCCGGGCAGCCCTGGTGAACGCAAAGATGTGTaGGTAATCAAGGAAGAGGTG +
Preference number: 2 (lower is better)
Translates to: SNRNLPDLPGEPPPGSPGERKDV*VIKEEV
Trigger: CACCTCTTCCTTGATTACTCACACATCTTTGCGTTC...ACCAGGGCTGCCCGGCGGGGGCTCTCCTGGCAAGTCAGGAAGGTTTCTGTTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp AGAATACACCTGCCCTTCCTCGGGCTGATAAAGCCACACGACACAGCACAGGCAAAGGCAAGGCTCTGCTaGTCCCCGCCTTCTTGCTGT +
Preference number: 2 (lower is better)
Translates to: RIHLPFLGLIKPHDTAQAKARLC*SPPSCC
Trigger: ACAGCAAGAAGGCGGGGAGCAGCAGAGCCTTGCCTT...TGCCTGTGCTGTGTCGTGTGGCTTTATCAGCCCGAGGAAGGGCAGGTGTATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp AGCAACAGAAACCTTCCTGACTTGCCAGGAGAGCCCCCGCCGGGCAGCCCTGGTCAAAACCTGGCTTTTTaGATTTGCCTTGACTCACGC +
Preference number: 2 (lower is better)
Translates to: SNRNLPDLPGEPPPGSPGQNLAF*ICLDSR
Trigger: GCGTGAGTCAAGGCAAATGCAAAAAGCCAGGTTTTG...ACCAGGGCTGCCCGGCGGGGGCTCTCCTGGCAAGTCAGGAAGGTTTCTGTTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp AGCAACAGAAACCTTCCTGACTTGCCAGGAGAGCCCCCGCCGGGCAGCCCTGGTTTAAGCGAGGCTAATTaGCCTTACCAGCATTGTTGC +
Preference number: 2 (lower is better)
Translates to: SNRNLPDLPGEPPPGSPGLSEAN*PYQHCC
Trigger: GCAACAATGCTGGTAAGGGCAATTAGCCTCGCTTAA...ACCAGGGCTGCCCGGCGGGGGCTCTCCTGGCAAGTCAGGAAGGTTTCTGTTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR CAA 90 bp AGAGGGAGTCTCCAATCCGTGCTAGACAGCTCAGCTTACTCCCCCTaGGTGTCTAGAAAAACAGACCTCACTTGTGCGTGCCCACAGGCC +
Preference number: 2 (lower is better)
Translates to: RGSLQSVLDSSAYSP*VSRKTDLTCACPQA
Trigger: GGCCTGTGGGCACGCACAAGTGAGGTCTGTTTTTCTAGACACCAAGGGGGAGTAAGCTGAGCTGTCTAGCACGGATTGGAGACTCCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR TCA 90 bp GTGTCTAGAAAAACAGACCTCACTTGTGCGTGCCCACAGGCCACTGAGGTGGAATCAGCCCCGAACCAGTaGACATTCTCCAGCTGGCCT +
Preference number: 2 (lower is better)
Translates to: VSRKTDLTCACPQATEVESAPNQ*TFSSWP
Trigger: AGGCCAGCTGGAGAATGTTCACTGGTTCGGGGCTGA...TTCCACCTCAGTGGCCTGTGGGCACGCACAAGTGAGGTCTGTTTTTCTAGACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR TCA 90 bp AGAATACACCTGCCCTTCCTCGGGCTGATAAAGCCACACGACACAGCACAGGCAGAGCCCCTCAATGGCTaGCAGCATCTCGTCATCGTA +
Preference number: 2 (lower is better)
Translates to: RIHLPFLGLIKPHDTAQAEPLNG*QHLVIV
Trigger: TACGATGACGAGATGCTGTCAGCCATTGAGGGGCTC...TGCCTGTGCTGTGTCGTGTGGCTTTATCAGCCCGAGGAAGGGCAGGTGTATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673973.1
3UTR-3UTR GCA 90 bp AGAAGCCAACATGCACAGCCATCTGCATGCCTTTGGGATTGGCGTGGGGCGGAGGCTGTACTCTTAATTTaGAGCCCGGGGCAACTCATC +
Preference number: 2 (lower is better)
Translates to: RSQHAQPSACLWDWRGAEAVLLI*SPGQLI
Trigger: GATGAGTTGCCCCGGGCTGCAAATTAAGAGTACAGC...CTCCGCCCCACGCCAATCCCAAAGGCATGCAGATGGCTGTGCATGTTGGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CCA 90 bp GTGTCTAGAAAAACAGACCTCACTTGTGCGTGCCCACAGGCCACTGAGGTGGAACCTTTGGGATTGGCGTaGGGCGGAGAGTCTTCTCCT +
Preference number: 2 (lower is better)
Translates to: VSRKTDLTCACPQATEVEPLGLA*GGESSP
Trigger: AGGAGAAGACTCTCCGCCCCACGCCAATCCCAAAGG...TTCCACCTCAGTGGCCTGTGGGCACGCACAAGTGAGGTCTGTTTTTCTAGACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CCA 90 bp ACTCATCCCAGGACCCCAACAAGTCTGGTCAGTCACCCAATCTGCAACCCTGTACAGGCACAGAGCTTCTaGCCTCCCCTGCGCATTATG +
Preference number: 2 (lower is better)
Translates to: THPRTPTSLVSHPICNPVQAQSF*PPLRIM
Trigger: CATAATGCGCAGGGGAGGCCAGAAGCTCTGTGCCTG...TACAGGGTTGCAGATTGGGTGACTGACCAGACTTGTTGGGGTCCTGGGATGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CCA 90 bp GTGTCTAGAAAAACAGACCTCACTTGTGCGTGCCCACAGGCCACTGAGGTGGAAAGACGAAGATCAGGCTaGCGCAGGCAAAGTCGTGGC +
Preference number: 2 (lower is better)
Translates to: VSRKTDLTCACPQATEVERRRSG*RRQSRG
Trigger: GCCACGACTTTGCCTGCGCCAGCCTGATCTTCGTCT...TTCCACCTCAGTGGCCTGTGGGCACGCACAAGTGAGGTCTGTTTTTCTAGACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673973.1
3UTR-3UTR CCA 90 bp GTCTTGCTGCTCGCGGCCAGTAGGCCTGTCTCATTGCCAACAGGCAGCTCTGGACCTTCTCCAGGAAGATaGACCCAAAGGTGTAGAAGT +
Preference number: 2 (lower is better)
Translates to: VLLLAASRPVSLPTGSSGPSPGR*TQRCRS
Trigger: ACTTCTACACCTTTGGGTCCATCTTCCTGGAGAAGG...TCCAGAGCTGCCTGTTGGCAATGAGACAGGCCTACTGGCCGCGAGCAGCAAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567277.6
ENST00000673973.1
3UTR-3UTR CCA 90 bp ATAGTGCAGAGCGTCCCCCGAGCTGGGCAGCACCTCGAGAACTTGGTGGCAAAGCCTTCTCCAGGAAGATaGACCCAAAGGTGTAGAAGT +
Preference number: 2 (lower is better)
Translates to: IVQSVPRAGQHLENLVAKPSPGR*TQRCRS
Trigger: ACTTCTACACCTTTGGGTCCATCTTCCTGGAGAAGG...CTTTGCCACCAAGTTCTCGAGGTGCTGCCCAGCTCGGGGGACGCTCTGCACTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000567277.6
ENST00000673973.1
3UTR-3UTR TCA 90 bp TGCTCCCCGCCTTCTTGCTGTGACCACATTCCTCAGGACTCTATCCCCACAGCCACCAGAATGCCTCTGTaGGAAATGCTGTCATTGCCA +
Preference number: 2 (lower is better)
Translates to: CSPPSCCDHIPQDSIPTATRMPL*EMLSLP
Trigger: TGGCAATGACAGCATTTCTCACAGAGGCATTCTGGT...GGCTGTGGGGATAGAGTCCTGAGGAATGTGGTCACAGCAAGAAGGCGGGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp TTAATTTGCAGCCCGGGGCAACTCATCCCAGGACCCCAACAAGTCTGGTCAGTCTGTGCTAAAGTTGCCTaGCTGGCACCTCAGGGAACA +
Preference number: 2 (lower is better)
Translates to: LICSPGQLIPGPQQVWSVCAKVA*LAPQGT
Trigger: TGTTCCCTGAGGTGCCAGGCAGGCAACTTTAGCACA...GACTGACCAGACTTGTTGGGGTCCTGGGATGAGTTGCCCCGGGCTGCAAATTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp TTAATTTGCAGCCCGGGGCAACTCATCCCAGGACCCCAACAAGTCTGGTCAGTCTGCCTCTGTGAGAAATaGTGTCATTGCCAGGCCCAC +
Preference number: 2 (lower is better)
Translates to: LICSPGQLIPGPQQVWSVCLCEK*CHCQAH
Trigger: GTGGGCCTGGCAATGACAGCATTTCTCACAGAGGCA...GACTGACCAGACTTGTTGGGGTCCTGGGATGAGTTGCCCCGGGCTGCAAATTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CCA 90 bp CACCTTACTTTCAAAGCACCTCTCTCCAGAATGCTTGCCTCACAAGCTGCCTCACCATCTGCATGCCTTTaGGATTGGCGTGGGGCGGAG +
Preference number: 2 (lower is better)
Translates to: HLTFKAPLSRMLASQAASPSACL*DWRGAE
Trigger: CTCCGCCCCACGCCAATCCCAAAGGCATGCAGATGG...TGAGGCAGCTTGTGAGGCAAGCATTCTGGAGAGAGGTGCTTTGAAAGTAAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CCA 90 bp TGCTCCCCGCCTTCTTGCTGTGACCACATTCCTCAGGACTCTATCCCCACAGCCCAGCTTACTCCCCCTTaGTGTCTAGAAAAACAGACC +
Preference number: 2 (lower is better)
Translates to: CSPPSCCDHIPQDSIPTAQLTPP*CLEKQT
Trigger: GGTCTGTTTTTCTAGACACCAAGGGGGAGTAAGCTG...GGCTGTGGGGATAGAGTCCTGAGGAATGTGGTCACAGCAAGAAGGCGGGGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CCA 90 bp AGAAGCCAACATGCACAGCCATCTGCATGCCTTTGGGATTGGCGTGGGGCGGAGCAGCTTACTCCCCCTTaGTGTCTAGAAAAACAGACC +
Preference number: 2 (lower is better)
Translates to: RSQHAQPSACLWDWRGAEQLTPP*CLEKQT
Trigger: GGTCTGTTTTTCTAGACACCAAGGGGGAGTAAGCTG...CTCCGCCCCACGCCAATCCCAAAGGCATGCAGATGGCTGTGCATGTTGGCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR TCA 90 bp AGCTTCATTTACCAGAATGCCTCTGTGAGAAATGCTGTCATTGCCAGGCCCACCCCCGCCTTCTTGCTGTaGCCACATTCCTCAGGACTC +
Preference number: 2 (lower is better)
Translates to: SFIYQNASVRNAVIARPTPAFLL*PHSSGL
Trigger: GAGTCCTGAGGAATGTGGTCACAGCAAGAAGGCGGG...GGTGGGCCTGGCAATGACAGCATTTCTCACAGAGGCATTCTGGTAAATGAAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR TCA 90 bp AGCAACAGAAACCTTCCTGACTTGCCAGGAGAGCCCCCGCCGGGCAGCCCTGGTTTGTTACAGTTAGGTTaGCTTTCAATTCCTTGGGAA +
Preference number: 2 (lower is better)
Translates to: SNRNLPDLPGEPPPGSPGLLQLG*LSIPWE
Trigger: TTCCCAAGGAATTGAAAGTCAACCTAACTGTAACAA...ACCAGGGCTGCCCGGCGGGGGCTCTCCTGGCAAGTCAGGAAGGTTTCTGTTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp AGCTTCATTTACCAGAATGCCTCTGTGAGAAATGCTGTCATTGCCAGGCCCACCGCACAGCCATCTGCATaGCTTTGGGATTGGCGTGGG +
Preference number: 2 (lower is better)
Translates to: SFIYQNASVRNAVIARPTAQPSA*LWDWRG
Trigger: CCCACGCCAATCCCAAAGGCATGCAGATGGCTGTGC...GGTGGGCCTGGCAATGACAGCATTTCTCACAGAGGCATTCTGGTAAATGAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp TCTAGAAAAACAGACCTCACTTGTGCGTGCCCACAGGCCACTGAGGTGGAAGTCACATGCACAGCCATCTaGATGCCTTTGGGATTGGCG +
Preference number: 2 (lower is better)
Translates to: SRKTDLTCACPQATEVEVTCTAI*MPLGLA
Trigger: CGCCAATCCCAAAGGCATGCAGATGGCTGTGCATGT...GACTTCCACCTCAGTGGCCTGTGGGCACGCACAAGTGAGGTCTGTTTTTCTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp TTAATTTGCAGCCCGGGGCAACTCATCCCAGGACCCCAACAAGTCTGGTCAGTCTTATGGCTCAGTGGCTaGTTCGAGCCAGAATCTGGT +
Preference number: 2 (lower is better)
Translates to: LICSPGQLIPGPQQVWSVLWLSG*FEPESG
Trigger: ACCAGATTCTGGCTCGAAGCAGCCACTGAGCCATAA...GACTGACCAGACTTGTTGGGGTCCTGGGATGAGTTGCCCCGGGCTGCAAATTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp GCTCCTGTATGCAAGACTTTGTGTAGAACTTTACGGGGTTCATGGGGACACCTAGACCTCACTTGTGCGTaGCCACAGGCCACTGAGGTG +
Preference number: 2 (lower is better)
Translates to: APVCKTLCRTLRGSWGHLDLTCA*PQATEV
Trigger: CACCTCAGTGGCCTGTGGGCACGCACAAGTGAGGTC...TAGGTGTCCCCATGAACCCCGTAAAGTTCTACACAAAGTCTTGCATACAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp AGCTTCATTTACCAGAATGCCTCTGTGAGAAATGCTGTCATTGCCAGGCCCACCAAGGCAAGGCTCTGCTaGTCCCCGCCTTCTTGCTGT +
Preference number: 2 (lower is better)
Translates to: SFIYQNASVRNAVIARPTKARLC*SPPSCC
Trigger: ACAGCAAGAAGGCGGGGAGCAGCAGAGCCTTGCCTT...GGTGGGCCTGGCAATGACAGCATTTCTCACAGAGGCATTCTGGTAAATGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp GTTCCCTCCACCGCCACCCCCGCACTTAGCTGTACTCTTAATTTGCAGCCCGGGAAAGGAAAGAAGAGATaGACTCACAGGTTGTCCAAG +
Preference number: 2 (lower is better)
Translates to: VPSTATPALSCTLNLQPGKGKKR*THRLSK
Trigger: CTTGGACAACCTGTGAGTGCATCTCTTCTTTCCTTT...CCCGGGCTGCAAATTAAGAGTACAGCTAAGTGCGGGGGTGGCGGTGGAGGGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp AGAATACACCTGCCCTTCCTCGGGCTGATAAAGCCACACGACACAGCACAGGCACTCTGCATGCACCCATaGGGAGTAGATCCTTCTAGT +
Preference number: 2 (lower is better)
Translates to: RIHLPFLGLIKPHDTAQALCMHP*GVDPSS
Trigger: ACTAGAAGGATCTACTCCGCATGGGTGCATGCAGAG...TGCCTGTGCTGTGTCGTGTGGCTTTATCAGCCCGAGGAAGGGCAGGTGTATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp GTTCCCTCCACCGCCACCCCCGCACTTAGCTGTACTCTTAATTTGCAGCCCGGGTGTAGGGAAACTGAGTaGATTAGAAATCCTGGCGAT +
Preference number: 2 (lower is better)
Translates to: VPSTATPALSCTLNLQPGCRETE*IRNPGD
Trigger: ATCGCCAGGATTTCTAATGCACTCAGTTTCCCTACA...CCCGGGCTGCAAATTAAGAGTACAGCTAAGTGCGGGGGTGGCGGTGGAGGGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp CACCTGCCCTTCCTCGGGCTGATAAAGCCACACGACACAGCACAGGCAGACAGGTGTAGGGAAACTGAGTaGATTAGAAATCCTGGCGAT +
Preference number: 2 (lower is better)
Translates to: HLPFLGLIKPHDTAQADRCRETE*IRNPGD
Trigger: ATCGCCAGGATTTCTAATGCACTCAGTTTCCCTACA...CCTGTCTGCCTGTGCTGTGTCGTGTGGCTTTATCAGCCCGAGGAAGGGCAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp GTTCCCTCCACCGCCACCCCCGCACTTAGCTGTACTCTTAATTTGCAGCCCGGGCTAGCTAAGAATCCCTaGTATGTAGGGAAACTGAGT +
Preference number: 2 (lower is better)
Translates to: VPSTATPALSCTLNLQPGLAKNP*YVGKLS
Trigger: ACTCAGTTTCCCTACATAGCAGGGATTCTTAGCTAG...CCCGGGCTGCAAATTAAGAGTACAGCTAAGTGCGGGGGTGGCGGTGGAGGGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CCA 90 bp GAACAAAGATCTCAAAGTCAGCCCCGAACCAGTGAACATTCTCCAGCTGGCCTGTTCAGGGAAGGAGACTaGCTTCCCGGCCTTTTCGGA +
Preference number: 2 (lower is better)
Translates to: EQRSQSQPRTSEHSPAGLFREGD*LPGLFG
Trigger: TCCGAAAAGGCCGGGAAGCCAGTCTCCTTCCCTGAA...CAGGCCAGCTGGAGAATGTTCACTGGTTCGGGGCTGACTTTGAGATCTTTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CCA 90 bp TTAATTTGCAGCCCGGGGCAACTCATCCCAGGACCCCAACAAGTCTGGTCAGTCATTCTCCAGCTGGCCTaGAAACTGTTACAGACCAGG +
Preference number: 2 (lower is better)
Translates to: LICSPGQLIPGPQQVWSVILQLA*KLLQTR
Trigger: CCTGGTCTGTAACAGTTTCCAGGCCAGCTGGAGAAT...GACTGACCAGACTTGTTGGGGTCCTGGGATGAGTTGCCCCGGGCTGCAAATTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CCA 90 bp AGAATACACCTGCCCTTCCTCGGGCTGATAAAGCCACACGACACAGCACAGGCAATTCTCCAGCTGGCCTaGAAACTGTTACAGACCAGG +
Preference number: 2 (lower is better)
Translates to: RIHLPFLGLIKPHDTAQAILQLA*KLLQTR
Trigger: CCTGGTCTGTAACAGTTTCCAGGCCAGCTGGAGAAT...TGCCTGTGCTGTGTCGTGTGGCTTTATCAGCCCGAGGAAGGGCAGGTGTATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CCA 90 bp CCCTTCTTTGTTGACATCGCACTCTGTGTAGAACACTTTGAAGTCCGGCACGGAGGCAGCTCTGGAACTTaGAAAGGCATCAGGGGCAGG +
Preference number: 2 (lower is better)
Translates to: PFFVDIALCVEHFEVRHGGSSGT*KGIRGR
Trigger: CCTGCCCCTGATGCCTTTCCAAGTTCCAGAGCTGCC...TCCGTGCCGGACTTCAAAGTGTTCTACACAGAGTGCGATGTCAACAAAGAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673973.1
3UTR CAA 90 bp CCACAGGCCACTGAGGTGGAAGTCTGTTTTCATCATGTGCTAAAGTaGCCTGCCTGGCACCTCAGGGAACAAAGATCTCAAAGTCAGCCC +
Preference number: 2 (lower is better)
Translates to: PQATEVEVCFHHVLK*PAWHLREQRSQSQP
Trigger: GGGCTGACTTTGAGATCTTTGTTCCCTGAGGTGCCAGGCAGGCAACTTTAGCACATGATGAAAACAGACTTCCACCTCAGTGGCCTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR TCA 90 bp AGAATACACCTGCCCTTCCTCGGGCTGATAAAGCCACACGACACAGCACAGGCAACCAGAATGCCTCTGTaGGAAATGCTGTCATTGCCA +
Preference number: 2 (lower is better)
Translates to: RIHLPFLGLIKPHDTAQATRMPL*EMLSLP
Trigger: TGGCAATGACAGCATTTCTCACAGAGGCATTCTGGT...TGCCTGTGCTGTGTCGTGTGGCTTTATCAGCCCGAGGAAGGGCAGGTGTATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR TCA 90 bp CTGTTTTCATCATGTGCTAAAGTTGCCTGCCTGGCACCTCAGGGAACAAAGATCCCCGCCTTCTTGCTGTaGCCACATTCCTCAGGACTC +
Preference number: 2 (lower is better)
Translates to: LFSSCAKVACLAPQGTKIPAFLL*PHSSGL
Trigger: GAGTCCTGAGGAATGTGGTCACAGCAAGAAGGCGGG...GATCTTTGTTCCCTGAGGTGCCAGGCAGGCAACTTTAGCACATGATGAAAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp TTCTATGTTATATTAGCAACAGAAACCTTCCTGACTTGCCAGGAGAGCCCCCGCGCACAGCCATCTGCATaGCTTTGGGATTGGCGTGGG +
Preference number: 2 (lower is better)
Translates to: FYVILATETFLTCQESPRAQPSA*LWDWRG
Trigger: CCCACGCCAATCCCAAAGGCATGCAGATGGCTGTGC...GCGGGGGCTCTCCTGGCAAGTCAGGAAGGTTTCTGTTGCTAATATAACATAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp TGTAGAACTTTACGGGGTTCATGGGGACACCTAGCTAAGAATCCCTGCTATGTAGACCTCACTTGTGCGTaGCCACAGGCCACTGAGGTG +
Preference number: 2 (lower is better)
Translates to: CRTLRGSWGHLAKNPCYVDLTCA*PQATEV
Trigger: CACCTCAGTGGCCTGTGGGCACGCACAAGTGAGGTC...TACATAGCAGGGATTCTTAGCTAGGTGTCCCCATGAACCCCGTAAAGTTCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp GTGATGAGGCCACCGGTTAAGTCTTCCGGTTATGAAGTCCATTCAGAAAAAGTCGACCTCACTTGTGCGTaGCCACAGGCCACTGAGGTG +
Preference number: 2 (lower is better)
Translates to: VMRPPVKSSGYEVHSEKVDLTCA*PQATEV
Trigger: CACCTCAGTGGCCTGTGGGCACGCACAAGTGAGGTC...GACTTTTTCTGAATGGACTTCATAACCGGAAGACTTAACCGGTGGCCTCATCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp AACCTGGCTTTTTGCATTTGCCTTGACTCACGCAGTTTCAGAGCAAGAACGGCTAAGGCAAGGCTCTGCTaGTCCCCGCCTTCTTGCTGT +
Preference number: 2 (lower is better)
Translates to: NLAFCICLDSRSFRARTAKARLC*SPPSCC
Trigger: ACAGCAAGAAGGCGGGGAGCAGCAGAGCCTTGCCTT...AGCCGTTCTTGCTCTGAAACTGCGTGAGTCAAGGCAAATGCAAAAAGCCAGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp CTGTTTTCATCATGTGCTAAAGTTGCCTGCCTGGCACCTCAGGGAACAAAGATCTCAAAGGCAAGGCTCTaGTGCTCCCCGCCTTCTTGC +
Preference number: 2 (lower is better)
Translates to: LFSSCAKVACLAPQGTKISKARL*CSPPSC
Trigger: GCAAGAAGGCGGGGAGCAGCAGAGCCTTGCCTTTGA...GATCTTTGTTCCCTGAGGTGCCAGGCAGGCAACTTTAGCACATGATGAAAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp AGAAGCCAACATGCACAGCCATCTGCATGCCTTTGGGATTGGCGTGGGGCGGAGAAAGGAAAGAAGAGATaGACTCACAGGTTGTCCAAG +
Preference number: 2 (lower is better)
Translates to: RSQHAQPSACLWDWRGAEKGKKR*THRLSK
Trigger: CTTGGACAACCTGTGAGTGCATCTCTTCTTTCCTTT...CTCCGCCCCACGCCAATCCCAAAGGCATGCAGATGGCTGTGCATGTTGGCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp CCCTTCTTTGTTGACATCGCACTCTGTGTAGAACACTTTGAAGTCCGGCACGGACATGGACGAGCAGGATaGAGACGAAGATCAGGCTGG +
Preference number: 2 (lower is better)
Translates to: PFFVDIALCVEHFEVRHGHGRAG*RRRSGW
Trigger: CCAGCCTGATCTTCGTCTGCATCCTGCTCGTCCATG...TCCGTGCCGGACTTCAAAGTGTTCTACACAGAGTGCGATGTCAACAAAGAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673973.1
3UTR-3UTR GCA 90 bp ATAGTCAATCTGTCTGGAGAGTGTAAGCAGGGTGATGTAGAACAGGACCAGGTAACAGGGCTCTTGTCTTaGTGCTCGCGGCCAGTAGGC +
Preference number: 2 (lower is better)
Translates to: IVNLSGECKQGDVEQDQVTGLLS*CSRPVG
Trigger: GCCTACTGGCCGCGAGCAGCAAGACAAGAGCCCTGT...TACCTGGTCCTGTTCTACATCACCCTGCTTACACTCTCCAGACAGATTGACTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673973.1
3UTR-3UTR CCA 90 bp AGCTTCATTTACCAGAATGCCTCTGTGAGAAATGCTGTCATTGCCAGGCCCACCTTCAGGGAAGGAGACTaGCTTCCCGGCCTTTTCGGA +
Preference number: 2 (lower is better)
Translates to: SFIYQNASVRNAVIARPTFREGD*LPGLFG
Trigger: TCCGAAAAGGCCGGGAAGCCAGTCTCCTTCCCTGAA...GGTGGGCCTGGCAATGACAGCATTTCTCACAGAGGCATTCTGGTAAATGAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CCA 90 bp TGTAGAACTTTACGGGGTTCATGGGGACACCTAGCTAAGAATCCCTGCTATGTACCATCTGCATGCCTTTaGGATTGGCGTGGGGCGGAG +
Preference number: 2 (lower is better)
Translates to: CRTLRGSWGHLAKNPCYVPSACL*DWRGAE
Trigger: CTCCGCCCCACGCCAATCCCAAAGGCATGCAGATGG...TACATAGCAGGGATTCTTAGCTAGGTGTCCCCATGAACCCCGTAAAGTTCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CCA 90 bp GAACAAAGATCTCAAAGTCAGCCCCGAACCAGTGAACATTCTCCAGCTGGCCTGCGCATTATGGCTCAGTaGCTGCTTCGAGCCAGAATC +
Preference number: 2 (lower is better)
Translates to: EQRSQSQPRTSEHSPAGLRIMAQ*LLRARI
Trigger: GATTCTGGCTCGAAGCAGCCACTGAGCCATAATGCG...CAGGCCAGCTGGAGAATGTTCACTGGTTCGGGGCTGACTTTGAGATCTTTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CCA 90 bp CTGTTTTCATCATGTGCTAAAGTTGCCTGCCTGGCACCTCAGGGAACAAAGATCCTCCCCTGCGCATTATaGCTCAGTGGCTGCTTCGAG +
Preference number: 2 (lower is better)
Translates to: LFSSCAKVACLAPQGTKILPCAL*LSGCFE
Trigger: CTCGAAGCAGCCACTGAGCCATAATGCGCAGGGGAG...GATCTTTGTTCCCTGAGGTGCCAGGCAGGCAACTTTAGCACATGATGAAAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR TCA 90 bp CACCTTACTTTCAAAGCACCTCTCTCCAGAATGCTTGCCTCACAAGCTGCCTCATCTGGTGCATGTGTCTaGGAAATCCTCCAGTGCAGG +
Preference number: 2 (lower is better)
Translates to: HLTFKAPLSRMLASQAASSGACV*EILQCR
Trigger: CCTGCACTGGAGGATTTCTCAGACACATGCACCAGA...TGAGGCAGCTTGTGAGGCAAGCATTCTGGAGAGAGGTGCTTTGAAAGTAAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR TCA 90 bp CCCTTTCAGCTTCATTTACCAGAATGCCTCTGTGAGAAATGCTGTCATTGCCAGCCCGCCTTCTTGCTGTaGCCACATTCCTCAGGACTC +
Preference number: 2 (lower is better)
Translates to: PFQLHLPECLCEKCCHCQPAFLL*PHSSGL
Trigger: GAGTCCTGAGGAATGTGGTCACAGCAAGAAGGCGGG...CTGGCAATGACAGCATTTCTCACAGAGGCATTCTGGTAAATGAAGCTGAAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR TCA 90 bp ACTCATCCCAGGACCCCAACAAGTCTGGTCAGTCACCCAATCTGCAACCCTGTAAAAGTAAGATACAGTTaGAGGACGGCAGGGGAGAAC +
Preference number: 2 (lower is better)
Translates to: THPRTPTSLVSHPICNPVKVRYS*RTAGEN
Trigger: GTTCTCCCCTGCCGTCCTTCAACTGTATCTTACTTT...TACAGGGTTGCAGATTGGGTGACTGACCAGACTTGTTGGGGTCCTGGGATGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR TCA 90 bp CACCTGCCCTTCCTCGGGCTGATAAAGCCACACGACACAGCACAGGCAGACAGGTTGTTACAGTTAGGTTaGCTTTCAATTCCTTGGGAA +
Preference number: 2 (lower is better)
Translates to: HLPFLGLIKPHDTAQADRLLQLG*LSIPWE
Trigger: TTCCCAAGGAATTGAAAGTCAACCTAACTGTAACAA...CCTGTCTGCCTGTGCTGTGTCGTGTGGCTTTATCAGCCCGAGGAAGGGCAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR TCA 90 bp TTTGCATTTGCCTTGACTCACGCAGTTTCAGAGCAAGAACGGCTCAGCATTTGTCAACAGAAACCTTCCTaGCTTGCCAGGAGAGCCCCC +
Preference number: 2 (lower is better)
Translates to: FAFALTHAVSEQERLSICQQKPS*LARRAP
Trigger: GGGGGCTCTCCTGGCAAGTCAGGAAGGTTTCTGTTG...ACAAATGCTGAGCCGTTCTTGCTCTGAAACTGCGTGAGTCAAGGCAAATGCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp ACTCATCCCAGGACCCCAACAAGTCTGGTCAGTCACCCAATCTGCAACCCTGTACGAGCCAGAATCTGGTaGATGTGTCTGAGAAATCCT +
Preference number: 2 (lower is better)
Translates to: THPRTPTSLVSHPICNPVRARIW*MCLRNP
Trigger: AGGATTTCTCAGACACATGCACCAGATTCTGGCTCG...TACAGGGTTGCAGATTGGGTGACTGACCAGACTTGTTGGGGTCCTGGGATGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp CACCTTACTTTCAAAGCACCTCTCTCCAGAATGCTTGCCTCACAAGCTGCCTCATGTGCTAAAGTTGCCTaGCTGGCACCTCAGGGAACA +
Preference number: 2 (lower is better)
Translates to: HLTFKAPLSRMLASQAASCAKVA*LAPQGT
Trigger: TGTTCCCTGAGGTGCCAGGCAGGCAACTTTAGCACA...TGAGGCAGCTTGTGAGGCAAGCATTCTGGAGAGAGGTGCTTTGAAAGTAAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp GTGATGAGGCCACCGGTTAAGTCTTCCGGTTATGAAGTCCATTCAGAAAAAGTCAAGGCAAGGCTCTGCTaGTCCCCGCCTTCTTGCTGT +
Preference number: 2 (lower is better)
Translates to: VMRPPVKSSGYEVHSEKVKARLC*SPPSCC
Trigger: ACAGCAAGAAGGCGGGGAGCAGCAGAGCCTTGCCTT...GACTTTTTCTGAATGGACTTCATAACCGGAAGACTTAACCGGTGGCCTCATCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp AGGCTCCTGTATGCAAGACTTTGTGTAGAACTTTACGGGGTTCATGGGGACACCGCTTGCCTCACAAGCTaGCTCATTCAAAGGCAAGGC +
Preference number: 2 (lower is better)
Translates to: RLLYARLCVELYGVHGDTACLTS*LIQRQG
Trigger: GCCTTGCCTTTGAATGAGGCAGCTTGTGAGGCAAGC...GGTGTCCCCATGAACCCCGTAAAGTTCTACACAAAGTCTTGCATACAGGAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp GCTCCTGTATGCAAGACTTTGTGTAGAACTTTACGGGGTTCATGGGGACACCTAAGATCCAGGAGCCTCTaGATGCACCCATGCGGAGTA +
Preference number: 2 (lower is better)
Translates to: APVCKTLCRTLRGSWGHLRSRSL*MHPCGV
Trigger: TACTCCGCATGGGTGCATGCAGAGGCTCCTGGATCT...TAGGTGTCCCCATGAACCCCGTAAAGTTCTACACAAAGTCTTGCATACAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp GAATGCCTCTGTGAGAAATGCTGTCATTGCCAGGCCCACCAGGGAGAGGGAGTCTGTAGGGAAACTGAGTaGATTAGAAATCCTGGCGAT +
Preference number: 2 (lower is better)
Translates to: ECLCEKCCHCQAHQGEGVCRETE*IRNPGD
Trigger: ATCGCCAGGATTTCTAATGCACTCAGTTTCCCTACA...GACTCCCTCTCCCTGGTGGGCCTGGCAATGACAGCATTTCTCACAGAGGCATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp AGAAGCCAACATGCACAGCCATCTGCATGCCTTTGGGATTGGCGTGGGGCGGAGGTAAAGGCTCCTGTATaGAAGACTTTGTGTAGAACT +
Preference number: 2 (lower is better)
Translates to: RSQHAQPSACLWDWRGAEVKAPV*KTLCRT
Trigger: AGTTCTACACAAAGTCTTGCATACAGGAGCCTTTAC...CTCCGCCCCACGCCAATCCCAAAGGCATGCAGATGGCTGTGCATGTTGGCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp AGCTTCATTTACCAGAATGCCTCTGTGAGAAATGCTGTCATTGCCAGGCCCACCGTAGGCCTGTCTCATTaGCAACAGGCAGCTCTGGAA +
Preference number: 2 (lower is better)
Translates to: SFIYQNASVRNAVIARPTVGLSH*QQAALE
Trigger: TTCCAGAGCTGCCTGTTGGCAATGAGACAGGCCTAC...GGTGGGCCTGGCAATGACAGCATTTCTCACAGAGGCATTCTGGTAAATGAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673973.1
3UTR-3UTR CCA 90 bp AACCTGGCTTTTTGCATTTGCCTTGACTCACGCAGTTTCAGAGCAAGAACGGCTTTCAGGGAAGGAGACTaGCTTCCCGGCCTTTTCGGA +
Preference number: 2 (lower is better)
Translates to: NLAFCICLDSRSFRARTAFREGD*LPGLFG
Trigger: TCCGAAAAGGCCGGGAAGCCAGTCTCCTTCCCTGAA...AGCCGTTCTTGCTCTGAAACTGCGTGAGTCAAGGCAAATGCAAAAAGCCAGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CCA 90 bp CAAAACCTGGCTTTTTGCATTTGCCTTGACTCACGCAGTTTCAGAGCAAGAACGGCATGCCTTTGGGATTaGCGTGGGGCGGAGAGTCTT +
Preference number: 2 (lower is better)
Translates to: QNLAFCICLDSRSFRARTACLWD*RGAESL
Trigger: AAGACTCTCCGCCCCACGCCAATCCCAAAGGCATGC...CGTTCTTGCTCTGAAACTGCGTGAGTCAAGGCAAATGCAAAAAGCCAGGTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CCA 90 bp GTGATGAGGCCACCGGTTAAGTCTTCCGGTTATGAAGTCCATTCAGAAAAAGTCCTCCCCTGCGCATTATaGCTCAGTGGCTGCTTCGAG +
Preference number: 2 (lower is better)
Translates to: VMRPPVKSSGYEVHSEKVLPCAL*LSGCFE
Trigger: CTCGAAGCAGCCACTGAGCCATAATGCGCAGGGGAG...GACTTTTTCTGAATGGACTTCATAACCGGAAGACTTAACCGGTGGCCTCATCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CCA 90 bp GTGTCTAGAAAAACAGACCTCACTTGTGCGTGCCCACAGGCCACTGAGGTGGAAAAGTCACGGGCAGTTTaGTCATTTCTCACCCTGTTG +
Preference number: 2 (lower is better)
Translates to: VSRKTDLTCACPQATEVEKSRAV*SFLTLL
Trigger: CAACAGGGTGAGAAATGACCAAACTGCCCGTGACTT...TTCCACCTCAGTGGCCTGTGGGCACGCACAAGTGAGGTCTGTTTTTCTAGACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR TCA 90 bp GTGTCTAGAAAAACAGACCTCACTTGTGCGTGCCCACAGGCCACTGAGGTGGAAGAACGCAAAGATGTGTaGGTAATCAAGGAAGAGGTG +
Preference number: 2 (lower is better)
Translates to: VSRKTDLTCACPQATEVEERKDV*VIKEEV
Trigger: CACCTCTTCCTTGATTACTCACACATCTTTGCGTTC...TTCCACCTCAGTGGCCTGTGGGCACGCACAAGTGAGGTCTGTTTTTCTAGACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR TCA 90 bp GTGTCTAGAAAAACAGACCTCACTTGTGCGTGCCCACAGGCCACTGAGGTGGAATTTTTGCATTTGCCTTaGCTCACGCAGTTTCAGAGC +
Preference number: 2 (lower is better)
Translates to: VSRKTDLTCACPQATEVEFLHLP*LTQFQS
Trigger: GCTCTGAAACTGCGTGAGTCAAGGCAAATGCAAAAA...TTCCACCTCAGTGGCCTGTGGGCACGCACAAGTGAGGTCTGTTTTTCTAGACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR TCA 90 bp AGGCTCCTGTATGCAAGACTTTGTGTAGAACTTTACGGGGTTCATGGGGACACCCCAGCCCTTCTTTGTTaGCATCGCACTCTGTGTAGA +
Preference number: 2 (lower is better)
Translates to: RLLYARLCVELYGVHGDTPALLC*HRTLCR
Trigger: TCTACACAGAGTGCGATGTCAACAAAGAAGGGCTGG...GGTGTCCCCATGAACCCCGTAAAGTTCTACACAAAGTCTTGCATACAGGAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673973.1
3UTR-3UTR GCA 90 bp AACCTGGCTTTTTGCATTTGCCTTGACTCACGCAGTTTCAGAGCAAGAACGGCTTGTGCTAAAGTTGCCTaGCTGGCACCTCAGGGAACA +
Preference number: 2 (lower is better)
Translates to: NLAFCICLDSRSFRARTACAKVA*LAPQGT
Trigger: TGTTCCCTGAGGTGCCAGGCAGGCAACTTTAGCACA...AGCCGTTCTTGCTCTGAAACTGCGTGAGTCAAGGCAAATGCAAAAAGCCAGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp CAAAACCTGGCTTTTTGCATTTGCCTTGACTCACGCAGTTTCAGAGCAAGAACGGAGAAATGCTGTCATTaGCAGGCCCACCAGGGAGAG +
Preference number: 2 (lower is better)
Translates to: QNLAFCICLDSRSFRARTEKCCH*QAHQGE
Trigger: CTCTCCCTGGTGGGCCTGGCAATGACAGCATTTCTC...CGTTCTTGCTCTGAAACTGCGTGAGTCAAGGCAAATGCAAAAAGCCAGGTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp TACTTTCAAAGCACCTCTCTCCAGAATGCTTGCCTCACAAGCTGCCTCATTCAAGAGAAATGCTGTCATTaGCAGGCCCACCAGGGAGAG +
Preference number: 2 (lower is better)
Translates to: YFQSTSLQNACLTSCLIQEKCCH*QAHQGE
Trigger: CTCTCCCTGGTGGGCCTGGCAATGACAGCATTTCTC...TTGAATGAGGCAGCTTGTGAGGCAAGCATTCTGGAGAGAGGTGCTTTGAAAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp TGTAGAACTTTACGGGGTTCATGGGGACACCTAGCTAAGAATCCCTGCTATGTATGCTCCCCGCCTTCTTaGTGTGACCACATTCCTCAG +
Preference number: 2 (lower is better)
Translates to: CRTLRGSWGHLAKNPCYVCSPPS*CDHIPQ
Trigger: CTGAGGAATGTGGTCACAGCAAGAAGGCGGGGAGCA...TACATAGCAGGGATTCTTAGCTAGGTGTCCCCATGAACCCCGTAAAGTTCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp AACCTGGCTTTTTGCATTTGCCTTGACTCACGCAGTTTCAGAGCAAGAACGGCTCACCTCTCTCCAGAATaGTTGCCTCACAAGCTGCCT +
Preference number: 2 (lower is better)
Translates to: NLAFCICLDSRSFRARTAHLSPE*LPHKLP
Trigger: AGGCAGCTTGTGAGGCAAGCATTCTGGAGAGAGGTG...AGCCGTTCTTGCTCTGAAACTGCGTGAGTCAAGGCAAATGCAAAAAGCCAGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp CACCTTACTTTCAAAGCACCTCTCTCCAGAATGCTTGCCTCACAAGCTGCCTCACTCTGCATGCACCCATaGGGAGTAGATCCTTCTAGT +
Preference number: 2 (lower is better)
Translates to: HLTFKAPLSRMLASQAASLCMHP*GVDPSS
Trigger: ACTAGAAGGATCTACTCCGCATGGGTGCATGCAGAG...TGAGGCAGCTTGTGAGGCAAGCATTCTGGAGAGAGGTGCTTTGAAAGTAAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp AGGCTCCTGTATGCAAGACTTTGTGTAGAACTTTACGGGGTTCATGGGGACACCCTCTGCATGCACCCATaGGGAGTAGATCCTTCTAGT +
Preference number: 2 (lower is better)
Translates to: RLLYARLCVELYGVHGDTLCMHP*GVDPSS
Trigger: ACTAGAAGGATCTACTCCGCATGGGTGCATGCAGAG...GGTGTCCCCATGAACCCCGTAAAGTTCTACACAAAGTCTTGCATACAGGAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp GTGATGAGGCCACCGGTTAAGTCTTCCGGTTATGAAGTCCATTCAGAAAAAGTCAGATCCAGGAGCCTCTaGATGCACCCATGCGGAGTA +
Preference number: 2 (lower is better)
Translates to: VMRPPVKSSGYEVHSEKVRSRSL*MHPCGV
Trigger: TACTCCGCATGGGTGCATGCAGAGGCTCCTGGATCT...GACTTTTTCTGAATGGACTTCATAACCGGAAGACTTAACCGGTGGCCTCATCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp GTCATTTCTCACCCTGTTGTTACAGTTAGGTTGACTTTCAATTCCTTGGGAAGTGAAACCTTCCTGACTTaGCAGGAGAGCCCCCGCCGG +
Preference number: 2 (lower is better)
Translates to: VISHPVVTVRLTFNSLGSETFLT*QESPRR
Trigger: CCGGCGGGGGCTCTCCTGGCAAGTCAGGAAGGTTTC...ACTTCCCAAGGAATTGAAAGTCAACCTAACTGTAACAACAGGGTGAGAAATGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CCA 90 bp CTGTTTTCATCATGTGCTAAAGTTGCCTGCCTGGCACCTCAGGGAACAAAGATCCGCATTATGGCTCAGTaGCTGCTTCGAGCCAGAATC +
Preference number: 2 (lower is better)
Translates to: LFSSCAKVACLAPQGTKIRIMAQ*LLRARI
Trigger: GATTCTGGCTCGAAGCAGCCACTGAGCCATAATGCG...GATCTTTGTTCCCTGAGGTGCCAGGCAGGCAACTTTAGCACATGATGAAAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CCA 90 bp ACTCATCCCAGGACCCCAACAAGTCTGGTCAGTCACCCAATCTGCAACCCTGTAAGGCAGAGCATACACTaGAGGGAAGAGATTTATGTC +
Preference number: 2 (lower is better)
Translates to: THPRTPTSLVSHPICNPVRQSIH*REEIYV
Trigger: GACATAAATCTCTTCCCTCCAGTGTATGCTCTGCCT...TACAGGGTTGCAGATTGGGTGACTGACCAGACTTGTTGGGGTCCTGGGATGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CCA 90 bp CTGTTTTCATCATGTGCTAAAGTTGCCTGCCTGGCACCTCAGGGAACAAAGATCGGACCCCAACAAGTCTaGTCAGTCACCCAATCTGCA +
Preference number: 2 (lower is better)
Translates to: LFSSCAKVACLAPQGTKIGPQQV*SVTQSA
Trigger: TGCAGATTGGGTGACTGACCAGACTTGTTGGGGTCC...GATCTTTGTTCCCTGAGGTGCCAGGCAGGCAACTTTAGCACATGATGAAAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR TCA 90 bp TACTTTCAAAGCACCTCTCTCCAGAATGCTTGCCTCACAAGCTGCCTCATTCAATCTGGTGCATGTGTCTaGGAAATCCTCCAGTGCAGG +
Preference number: 2 (lower is better)
Translates to: YFQSTSLQNACLTSCLIQSGACV*EILQCR
Trigger: CCTGCACTGGAGGATTTCTCAGACACATGCACCAGA...TTGAATGAGGCAGCTTGTGAGGCAAGCATTCTGGAGAGAGGTGCTTTGAAAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp TTTGCATTTGCCTTGACTCACGCAGTTTCAGAGCAAGAACGGCTCAGCATTTGTTGTGCTAAAGTTGCCTaGCTGGCACCTCAGGGAACA +
Preference number: 2 (lower is better)
Translates to: FAFALTHAVSEQERLSICCAKVA*LAPQGT
Trigger: TGTTCCCTGAGGTGCCAGGCAGGCAACTTTAGCACA...ACAAATGCTGAGCCGTTCTTGCTCTGAAACTGCGTGAGTCAAGGCAAATGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp GTGTCTAGAAAAACAGACCTCACTTGTGCGTGCCCACAGGCCACTGAGGTGGAACTAGCTAAGAATCCCTaGTATGTAGGGAAACTGAGT +
Preference number: 2 (lower is better)
Translates to: VSRKTDLTCACPQATEVELAKNP*YVGKLS
Trigger: ACTCAGTTTCCCTACATAGCAGGGATTCTTAGCTAG...TTCCACCTCAGTGGCCTGTGGGCACGCACAAGTGAGGTCTGTTTTTCTAGACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp CTGTTTTCATCATGTGCTAAAGTTGCCTGCCTGGCACCTCAGGGAACAAAGATCGCTGTACTCTTAATTTaGAGCCCGGGGCAACTCATC +
Preference number: 2 (lower is better)
Translates to: LFSSCAKVACLAPQGTKIAVLLI*SPGQLI
Trigger: GATGAGTTGCCCCGGGCTGCAAATTAAGAGTACAGC...GATCTTTGTTCCCTGAGGTGCCAGGCAGGCAACTTTAGCACATGATGAAAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CCA 90 bp TTTGCATTTGCCTTGACTCACGCAGTTTCAGAGCAAGAACGGCTCAGCATTTGTCGCATTATGGCTCAGTaGCTGCTTCGAGCCAGAATC +
Preference number: 2 (lower is better)
Translates to: FAFALTHAVSEQERLSICRIMAQ*LLRARI
Trigger: GATTCTGGCTCGAAGCAGCCACTGAGCCATAATGCG...ACAAATGCTGAGCCGTTCTTGCTCTGAAACTGCGTGAGTCAAGGCAAATGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CCA 90 bp AGGCTCCTGTATGCAAGACTTTGTGTAGAACTTTACGGGGTTCATGGGGACACCCAGCTTACTCCCCCTTaGTGTCTAGAAAAACAGACC +
Preference number: 2 (lower is better)
Translates to: RLLYARLCVELYGVHGDTQLTPP*CLEKQT
Trigger: GGTCTGTTTTTCTAGACACCAAGGGGGAGTAAGCTG...GGTGTCCCCATGAACCCCGTAAAGTTCTACACAAAGTCTTGCATACAGGAGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CCA 90 bp TTTGCATTTGCCTTGACTCACGCAGTTTCAGAGCAAGAACGGCTCAGCATTTGTGGACCCCAACAAGTCTaGTCAGTCACCCAATCTGCA +
Preference number: 2 (lower is better)
Translates to: FAFALTHAVSEQERLSICGPQQV*SVTQSA
Trigger: TGCAGATTGGGTGACTGACCAGACTTGTTGGGGTCC...ACAAATGCTGAGCCGTTCTTGCTCTGAAACTGCGTGAGTCAAGGCAAATGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR TCA 90 bp TTTGCATTTGCCTTGACTCACGCAGTTTCAGAGCAAGAACGGCTCAGCATTTGTAGAGTACAAATATGCTaGCCTCAGAGAGGCCCAGTG +
Preference number: 2 (lower is better)
Translates to: FAFALTHAVSEQERLSICRVQIC*PQRGPV
Trigger: CACTGGGCCTCTCTGAGGTCAGCATATTTGTACTCT...ACAAATGCTGAGCCGTTCTTGCTCTGAAACTGCGTGAGTCAAGGCAAATGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp AACCTGGCTTTTTGCATTTGCCTTGACTCACGCAGTTTCAGAGCAAGAACGGCTCGAGCCAGAATCTGGTaGATGTGTCTGAGAAATCCT +
Preference number: 2 (lower is better)
Translates to: NLAFCICLDSRSFRARTARARIW*MCLRNP
Trigger: AGGATTTCTCAGACACATGCACCAGATTCTGGCTCG...AGCCGTTCTTGCTCTGAAACTGCGTGAGTCAAGGCAAATGCAAAAAGCCAGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp CTGTTTTCATCATGTGCTAAAGTTGCCTGCCTGGCACCTCAGGGAACAAAGATCCGAGCCAGAATCTGGTaGATGTGTCTGAGAAATCCT +
Preference number: 2 (lower is better)
Translates to: LFSSCAKVACLAPQGTKIRARIW*MCLRNP
Trigger: AGGATTTCTCAGACACATGCACCAGATTCTGGCTCG...GATCTTTGTTCCCTGAGGTGCCAGGCAGGCAACTTTAGCACATGATGAAAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp TTTGCATTTGCCTTGACTCACGCAGTTTCAGAGCAAGAACGGCTCAGCATTTGTTTATGGCTCAGTGGCTaGTTCGAGCCAGAATCTGGT +
Preference number: 2 (lower is better)
Translates to: FAFALTHAVSEQERLSICLWLSG*FEPESG
Trigger: ACCAGATTCTGGCTCGAAGCAGCCACTGAGCCATAA...ACAAATGCTGAGCCGTTCTTGCTCTGAAACTGCGTGAGTCAAGGCAAATGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp ACCCCTTTCAGCTTCATTTACCAGAATGCCTCTGTGAGAAATGCTGTCATTGCCTTATGGCTCAGTGGCTaGTTCGAGCCAGAATCTGGT +
Preference number: 2 (lower is better)
Translates to: TPFSFIYQNASVRNAVIALWLSG*FEPESG
Trigger: ACCAGATTCTGGCTCGAAGCAGCCACTGAGCCATAA...GGCAATGACAGCATTTCTCACAGAGGCATTCTGGTAAATGAAGCTGAAAGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp ATAGTCAATCTGTCTGGAGAGTGTAAGCAGGGTGATGTAGAACAGGACCAGGTATTATGGCTCAGTGGCTaGTTCGAGCCAGAATCTGGT +
Preference number: 2 (lower is better)
Translates to: IVNLSGECKQGDVEQDQVLWLSG*FEPESG
Trigger: ACCAGATTCTGGCTCGAAGCAGCCACTGAGCCATAA...TACCTGGTCCTGTTCTACATCACCCTGCTTACACTCTCCAGACAGATTGACTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673973.1
3UTR-3UTR GCA 90 bp ACTCATCCCAGGACCCCAACAAGTCTGGTCAGTCACCCAATCTGCAACCCTGTAGTAAAGGCTCCTGTATaGAAGACTTTGTGTAGAACT +
Preference number: 2 (lower is better)
Translates to: THPRTPTSLVSHPICNPVVKAPV*KTLCRT
Trigger: AGTTCTACACAAAGTCTTGCATACAGGAGCCTTTAC...TACAGGGTTGCAGATTGGGTGACTGACCAGACTTGTTGGGGTCCTGGGATGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CCA 90 bp CACCTTACTTTCAAAGCACCTCTCTCCAGAATGCTTGCCTCACAAGCTGCCTCACTTCGAGCCAGAATCTaGTGCATGTGTCTGAGAAAT +
Preference number: 2 (lower is better)
Translates to: HLTFKAPLSRMLASQAASLRARI*CMCLRN
Trigger: ATTTCTCAGACACATGCACCAGATTCTGGCTCGAAG...TGAGGCAGCTTGTGAGGCAAGCATTCTGGAGAGAGGTGCTTTGAAAGTAAGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CCA 90 bp AACCTGGCTTTTTGCATTTGCCTTGACTCACGCAGTTTCAGAGCAAGAACGGCTCAGCTTACTCCCCCTTaGTGTCTAGAAAAACAGACC +
Preference number: 2 (lower is better)
Translates to: NLAFCICLDSRSFRARTAQLTPP*CLEKQT
Trigger: GGTCTGTTTTTCTAGACACCAAGGGGGAGTAAGCTG...AGCCGTTCTTGCTCTGAAACTGCGTGAGTCAAGGCAAATGCAAAAAGCCAGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CCA 90 bp AGGCTCCTGTATGCAAGACTTTGTGTAGAACTTTACGGGGTTCATGGGGACACCAGGCAGAGCATACACTaGAGGGAAGAGATTTATGTC +
Preference number: 2 (lower is better)
Translates to: RLLYARLCVELYGVHGDTRQSIH*REEIYV
Trigger: GACATAAATCTCTTCCCTCCAGTGTATGCTCTGCCT...GGTGTCCCCATGAACCCCGTAAAGTTCTACACAAAGTCTTGCATACAGGAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR TCA 90 bp AAGAGTACAAATATGCTGACCTCAGAGAGGCCCAGTGCACTAATGTGTTTCTATTCTGGTGCATGTGTCTaGGAAATCCTCCAGTGCAGG +
Preference number: 2 (lower is better)
Translates to: KSTNMLTSERPSALMCFYSGACV*EILQCR
Trigger: CCTGCACTGGAGGATTTCTCAGACACATGCACCAGA...ATAGAAACACATTAGTGCACTGGGCCTCTCTGAGGTCAGCATATTTGTACTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR TCA 90 bp GCTCCTGTATGCAAGACTTTGTGTAGAACTTTACGGGGTTCATGGGGACACCTAGAACGCAAAGATGTGTaGGTAATCAAGGAAGAGGTG +
Preference number: 2 (lower is better)
Translates to: APVCKTLCRTLRGSWGHLERKDV*VIKEEV
Trigger: CACCTCTTCCTTGATTACTCACACATCTTTGCGTTC...TAGGTGTCCCCATGAACCCCGTAAAGTTCTACACAAAGTCTTGCATACAGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR TCA 90 bp TTTGCATTTGCCTTGACTCACGCAGTTTCAGAGCAAGAACGGCTCAGCATTTGTAAAGTAAGATACAGTTaGAGGACGGCAGGGGAGAAC +
Preference number: 2 (lower is better)
Translates to: FAFALTHAVSEQERLSICKVRYS*RTAGEN
Trigger: GTTCTCCCCTGCCGTCCTTCAACTGTATCTTACTTT...ACAAATGCTGAGCCGTTCTTGCTCTGAAACTGCGTGAGTCAAGGCAAATGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR TCA 90 bp CTGTTTTCATCATGTGCTAAAGTTGCCTGCCTGGCACCTCAGGGAACAAAGATCTTTTTGCATTTGCCTTaGCTCACGCAGTTTCAGAGC +
Preference number: 2 (lower is better)
Translates to: LFSSCAKVACLAPQGTKIFLHLP*LTQFQS
Trigger: GCTCTGAAACTGCGTGAGTCAAGGCAAATGCAAAAA...GATCTTTGTTCCCTGAGGTGCCAGGCAGGCAACTTTAGCACATGATGAAAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR TCA 90 bp GCTCCTGTATGCAAGACTTTGTGTAGAACTTTACGGGGTTCATGGGGACACCTATTTTTGCATTTGCCTTaGCTCACGCAGTTTCAGAGC +
Preference number: 2 (lower is better)
Translates to: APVCKTLCRTLRGSWGHLFLHLP*LTQFQS
Trigger: GCTCTGAAACTGCGTGAGTCAAGGCAAATGCAAAAA...TAGGTGTCCCCATGAACCCCGTAAAGTTCTACACAAAGTCTTGCATACAGGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR TCA 90 bp CACCTTACTTTCAAAGCACCTCTCTCCAGAATGCTTGCCTCACAAGCTGCCTCAAATTCCTTGGGAAGTTaGAGCACAGTAAGACACATC +
Preference number: 2 (lower is better)
Translates to: HLTFKAPLSRMLASQAASNSLGS*STVRHI
Trigger: GATGTGTCTTACTGTGCTTCAACTTCCCAAGGAATT...TGAGGCAGCTTGTGAGGCAAGCATTCTGGAGAGAGGTGCTTTGAAAGTAAGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp AGTTTGGTCATTTCTCACCCTGTTGTTACAGTTAGGTTGACTTTCAATTCCTTGGCACAGCCATCTGCATaGCTTTGGGATTGGCGTGGG +
Preference number: 2 (lower is better)
Translates to: SLVISHPVVTVRLTFNSLAQPSA*LWDWRG
Trigger: CCCACGCCAATCCCAAAGGCATGCAGATGGCTGTGC...CAAGGAATTGAAAGTCAACCTAACTGTAACAACAGGGTGAGAAATGACCAAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp TACTTTCAAAGCACCTCTCTCCAGAATGCTTGCCTCACAAGCTGCCTCATTCAACGAGCCAGAATCTGGTaGATGTGTCTGAGAAATCCT +
Preference number: 2 (lower is better)
Translates to: YFQSTSLQNACLTSCLIQRARIW*MCLRNP
Trigger: AGGATTTCTCAGACACATGCACCAGATTCTGGCTCG...TTGAATGAGGCAGCTTGTGAGGCAAGCATTCTGGAGAGAGGTGCTTTGAAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp AAGAGTACAAATATGCTGACCTCAGAGAGGCCCAGTGCACTAATGTGTTTCTATTGCCTCTGTGAGAAATaGTGTCATTGCCAGGCCCAC +
Preference number: 2 (lower is better)
Translates to: KSTNMLTSERPSALMCFYCLCEK*CHCQAH
Trigger: GTGGGCCTGGCAATGACAGCATTTCTCACAGAGGCA...ATAGAAACACATTAGTGCACTGGGCCTCTCTGAGGTCAGCATATTTGTACTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp AGTTTGGTCATTTCTCACCCTGTTGTTACAGTTAGGTTGACTTTCAATTCCTTGTCAAAGGCAAGGCTCTaGTGCTCCCCGCCTTCTTGC +
Preference number: 2 (lower is better)
Translates to: SLVISHPVVTVRLTFNSLSKARL*CSPPSC
Trigger: GCAAGAAGGCGGGGAGCAGCAGAGCCTTGCCTTTGA...CAAGGAATTGAAAGTCAACCTAACTGTAACAACAGGGTGAGAAATGACCAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp TTTGCATTTGCCTTGACTCACGCAGTTTCAGAGCAAGAACGGCTCAGCATTTGTTCTCTCCAGAATGCTTaGCTCACAAGCTGCCTCATT +
Preference number: 2 (lower is better)
Translates to: FAFALTHAVSEQERLSICSLQNA*LTSCLI
Trigger: AATGAGGCAGCTTGTGAGGCAAGCATTCTGGAGAGA...ACAAATGCTGAGCCGTTCTTGCTCTGAAACTGCGTGAGTCAAGGCAAATGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp TTCTATGTTATATTAGCAACAGAAACCTTCCTGACTTGCCAGGAGAGCCCCCGCTTAAGCGAGGCTAATTaGCCTTACCAGCATTGTTGC +
Preference number: 2 (lower is better)
Translates to: FYVILATETFLTCQESPRLSEAN*PYQHCC
Trigger: GCAACAATGCTGGTAAGGGCAATTAGCCTCGCTTAA...GCGGGGGCTCTCCTGGCAAGTCAGGAAGGTTTCTGTTGCTAATATAACATAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp CTGTTTTCATCATGTGCTAAAGTTGCCTGCCTGGCACCTCAGGGAACAAAGATCTTAAGCGAGGCTAATTaGCCTTACCAGCATTGTTGC +
Preference number: 2 (lower is better)
Translates to: LFSSCAKVACLAPQGTKILSEAN*PYQHCC
Trigger: GCAACAATGCTGGTAAGGGCAATTAGCCTCGCTTAA...GATCTTTGTTCCCTGAGGTGCCAGGCAGGCAACTTTAGCACATGATGAAAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CCA 90 bp AGTTTGGTCATTTCTCACCCTGTTGTTACAGTTAGGTTGACTTTCAATTCCTTGGCATGCCTTTGGGATTaGCGTGGGGCGGAGAGTCTT +
Preference number: 2 (lower is better)
Translates to: SLVISHPVVTVRLTFNSLACLWD*RGAESL
Trigger: AAGACTCTCCGCCCCACGCCAATCCCAAAGGCATGC...CAAGGAATTGAAAGTCAACCTAACTGTAACAACAGGGTGAGAAATGACCAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CCA 90 bp CTGTTTTCATCATGTGCTAAAGTTGCCTGCCTGGCACCTCAGGGAACAAAGATCACTTTACGGGGTTCATaGGGACACCTAGCTAAGAAT +
Preference number: 2 (lower is better)
Translates to: LFSSCAKVACLAPQGTKITLRGS*GHLAKN
Trigger: ATTCTTAGCTAGGTGTCCCCATGAACCCCGTAAAGT...GATCTTTGTTCCCTGAGGTGCCAGGCAGGCAACTTTAGCACATGATGAAAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR TCA 90 bp AGCTTCATTTACCAGAATGCCTCTGTGAGAAATGCTGTCATTGCCAGGCCCACCCCAGCATTGTTGCCATaGAATTCCTTTATACAGCAA +
Preference number: 2 (lower is better)
Translates to: SFIYQNASVRNAVIARPTPALLP*NSFIQQ
Trigger: TTGCTGTATAAAGGAATTTCATGGCAACAATGCTGG...GGTGGGCCTGGCAATGACAGCATTTCTCACAGAGGCATTCTGGTAAATGAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR TCA 90 bp TTCTATGTTATATTAGCAACAGAAACCTTCCTGACTTGCCAGGAGAGCCCCCGCGTCACTGCTAGATCTTaGGAGCACAGATTTCAGTAT +
Preference number: 2 (lower is better)
Translates to: FYVILATETFLTCQESPRVTARS*EHRFQY
Trigger: ATACTGAAATCTGTGCTCTCAAGATCTAGCAGTGAC...GCGGGGGCTCTCCTGGCAAGTCAGGAAGGTTTCTGTTGCTAATATAACATAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp AGTTTGGTCATTTCTCACCCTGTTGTTACAGTTAGGTTGACTTTCAATTCCTTGGAGAAATGCTGTCATTaGCAGGCCCACCAGGGAGAG +
Preference number: 2 (lower is better)
Translates to: SLVISHPVVTVRLTFNSLEKCCH*QAHQGE
Trigger: CTCTCCCTGGTGGGCCTGGCAATGACAGCATTTCTC...CAAGGAATTGAAAGTCAACCTAACTGTAACAACAGGGTGAGAAATGACCAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp CTGTTTTCATCATGTGCTAAAGTTGCCTGCCTGGCACCTCAGGGAACAAAGATCTACCCAGCACCTTTGTaGAAATTAGAATACACCTGC +
Preference number: 2 (lower is better)
Translates to: LFSSCAKVACLAPQGTKIYPAPL*KLEYTC
Trigger: GCAGGTGTATTCTAATTTGCACAAAGGTGCTGGGTA...GATCTTTGTTCCCTGAGGTGCCAGGCAGGCAACTTTAGCACATGATGAAAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CCA 90 bp AGTTTGGTCATTTCTCACCCTGTTGTTACAGTTAGGTTGACTTTCAATTCCTTGTTCAGGGAAGGAGACTaGCTTCCCGGCCTTTTCGGA +
Preference number: 2 (lower is better)
Translates to: SLVISHPVVTVRLTFNSLFREGD*LPGLFG
Trigger: TCCGAAAAGGCCGGGAAGCCAGTCTCCTTCCCTGAA...CAAGGAATTGAAAGTCAACCTAACTGTAACAACAGGGTGAGAAATGACCAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CCA 90 bp CAAAACCTGGCTTTTTGCATTTGCCTTGACTCACGCAGTTTCAGAGCAAGAACGACTTTACGGGGTTCATaGGGACACCTAGCTAAGAAT +
Preference number: 2 (lower is better)
Translates to: QNLAFCICLDSRSFRARTTLRGS*GHLAKN
Trigger: ATTCTTAGCTAGGTGTCCCCATGAACCCCGTAAAGT...CGTTCTTGCTCTGAAACTGCGTGAGTCAAGGCAAATGCAAAAAGCCAGGTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR TCA 90 bp CCTTACTTTCAAAGCACCTCTCTCCAGAATGCTTGCCTCACAAGCTGCCTCATTCCAGCATTGTTGCCATaGAATTCCTTTATACAGCAA +
Preference number: 2 (lower is better)
Translates to: PYFQSTSLQNACLTSCLIPALLP*NSFIQQ
Trigger: TTGCTGTATAAAGGAATTTCATGGCAACAATGCTGG...AATGAGGCAGCTTGTGAGGCAAGCATTCTGGAGAGAGGTGCTTTGAAAGTAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp CTGTTTTCATCATGTGCTAAAGTTGCCTGCCTGGCACCTCAGGGAACAAAGATCCTTCATTTACCAGAATaGCTCTGTGAGAAATGCTGT +
Preference number: 2 (lower is better)
Translates to: LFSSCAKVACLAPQGTKILHLPE*LCEKCC
Trigger: ACAGCATTTCTCACAGAGGCATTCTGGTAAATGAAG...GATCTTTGTTCCCTGAGGTGCCAGGCAGGCAACTTTAGCACATGATGAAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp CAAAACCTGGCTTTTTGCATTTGCCTTGACTCACGCAGTTTCAGAGCAAGAACGAAAGGAAAGAAGAGATaGACTCACAGGTTGTCCAAG +
Preference number: 2 (lower is better)
Translates to: QNLAFCICLDSRSFRARTKGKKR*THRLSK
Trigger: CTTGGACAACCTGTGAGTGCATCTCTTCTTTCCTTT...CGTTCTTGCTCTGAAACTGCGTGAGTCAAGGCAAATGCAAAAAGCCAGGTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp TTCTATGTTATATTAGCAACAGAAACCTTCCTGACTTGCCAGGAGAGCCCCCGCGTAAAGGCTCCTGTATaGAAGACTTTGTGTAGAACT +
Preference number: 2 (lower is better)
Translates to: FYVILATETFLTCQESPRVKAPV*KTLCRT
Trigger: AGTTCTACACAAAGTCTTGCATACAGGAGCCTTTAC...GCGGGGGCTCTCCTGGCAAGTCAGGAAGGTTTCTGTTGCTAATATAACATAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CCA 90 bp CCTTACTTTCAAAGCACCTCTCTCCAGAATGCTTGCCTCACAAGCTGCCTCATTCTCCTTACATGTCAGTaGTTAAAAAGGCAGAGCATA +
Preference number: 2 (lower is better)
Translates to: PYFQSTSLQNACLTSCLILLTCQ*LKRQSI
Trigger: TATGCTCTGCCTTTTTAACCACTGACATGTAAGGAG...AATGAGGCAGCTTGTGAGGCAAGCATTCTGGAGAGAGGTGCTTTGAAAGTAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR CAA 90 bp GCAACCCTGTATAATCATCTTGTAAAGGCTCCTGTATGCAAGACTTaGTGTAGAACTTTACGGGGTTCATGGGGACACCTAGCTAAGAAT +
Preference number: 2 (lower is better)
Translates to: ATLYNHLVKAPVCKT*CRTLRGSWGHLAKN
Trigger: ATTCTTAGCTAGGTGTCCCCATGAACCCCGTAAAGTTCTACACAAAGTCTTGCATACAGGAGCCTTTACAAGATGATTATACAGGGTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR TCA 90 bp CTGTTTTCATCATGTGCTAAAGTTGCCTGCCTGGCACCTCAGGGAACAAAGATCTTGTTACAGTTAGGTTaGCTTTCAATTCCTTGGGAA +
Preference number: 2 (lower is better)
Translates to: LFSSCAKVACLAPQGTKILLQLG*LSIPWE
Trigger: TTCCCAAGGAATTGAAAGTCAACCTAACTGTAACAA...GATCTTTGTTCCCTGAGGTGCCAGGCAGGCAACTTTAGCACATGATGAAAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR TCA 90 bp CCTTACTTTCAAAGCACCTCTCTCCAGAATGCTTGCCTCACAAGCTGCCTCATTTTCTTCTATTCATACTaGTTCCACTTATGTGCAGCA +
Preference number: 2 (lower is better)
Translates to: PYFQSTSLQNACLTSCLIFFYSY*FHLCAA
Trigger: TGCTGCACATAAGTGGAATCAGTATGAATAGAAGAA...AATGAGGCAGCTTGTGAGGCAAGCATTCTGGAGAGAGGTGCTTTGAAAGTAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp TACTTTCAAAGCACCTCTCTCCAGAATGCTTGCCTCACAAGCTGCCTCATTCAACTTCATTTACCAGAATaGCTCTGTGAGAAATGCTGT +
Preference number: 2 (lower is better)
Translates to: YFQSTSLQNACLTSCLIQLHLPE*LCEKCC
Trigger: ACAGCATTTCTCACAGAGGCATTCTGGTAAATGAAG...TTGAATGAGGCAGCTTGTGAGGCAAGCATTCTGGAGAGAGGTGCTTTGAAAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp GTCATTTCTCACCCTGTTGTTACAGTTAGGTTGACTTTCAATTCCTTGGGAAGTTCTCTCCAGAATGCTTaGCTCACAAGCTGCCTCATT +
Preference number: 2 (lower is better)
Translates to: VISHPVVTVRLTFNSLGSSLQNA*LTSCLI
Trigger: AATGAGGCAGCTTGTGAGGCAAGCATTCTGGAGAGA...ACTTCCCAAGGAATTGAAAGTCAACCTAACTGTAACAACAGGGTGAGAAATGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp TTGTCCAAGTTGTCTCTAAACAGACTCCATTCCTTTCTGGTAAGAAAAGTAAGATCCCAAGTTCTCCAGTaGTTTCCATTCGGCTGGCCA +
Preference number: 2 (lower is better)
Translates to: LSKLSLNRLHSFLVRKVRSQVLQ*FPFGWP
Trigger: TGGCCAGCCGAATGGAAAGCACTGGAGAACTTGGGA...TCTTACTTTTCTTACCAGAAAGGAATGGAGTCTGTTTAGAGACAACTTGGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673973.1
3UTR-3UTR CCA 90 bp AAGAGTACAAATATGCTGACCTCAGAGAGGCCCAGTGCACTAATGTGTTTCTATAGGCAGAGCATACACTaGAGGGAAGAGATTTATGTC +
Preference number: 2 (lower is better)
Translates to: KSTNMLTSERPSALMCFYRQSIH*REEIYV
Trigger: GACATAAATCTCTTCCCTCCAGTGTATGCTCTGCCT...ATAGAAACACATTAGTGCACTGGGCCTCTCTGAGGTCAGCATATTTGTACTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CCA 90 bp CCCTTTCAGCTTCATTTACCAGAATGCCTCTGTGAGAAATGCTGTCATTGCCAGCTCCTTACATGTCAGTaGTTAAAAAGGCAGAGCATA +
Preference number: 2 (lower is better)
Translates to: PFQLHLPECLCEKCCHCQLLTCQ*LKRQSI
Trigger: TATGCTCTGCCTTTTTAACCACTGACATGTAAGGAG...CTGGCAATGACAGCATTTCTCACAGAGGCATTCTGGTAAATGAAGCTGAAAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CCA 90 bp AAGAGTACAAATATGCTGACCTCAGAGAGGCCCAGTGCACTAATGTGTTTCTATGAAGTCCTTGACCCATaGAGAAGGTCACTGTTTGTT +
Preference number: 2 (lower is better)
Translates to: KSTNMLTSERPSALMCFYEVLDP*RRSLFV
Trigger: AACAAACAGTGACCTTCTCCATGGGTCAAGGACTTC...ATAGAAACACATTAGTGCACTGGGCCTCTCTGAGGTCAGCATATTTGTACTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR CAA 90 bp GAGTTAGCTGTGAAGACTAAAGGAAAGAAGAGATGCACTCACAGGTaGTCCAAGTTGTCTCTAAACAGACTCCATTCCTTTCTGGTAAGA +
Preference number: 2 (lower is better)
Translates to: ELAVKTKGKKRCTHR*SKLSLNRLHSFLVR
Trigger: TCTTACCAGAAAGGAATGGAGTCTGTTTAGAGACAACTTGGACAACCTGTGAGTGCATCTCTTCTTTCCTTTAGTCTTCACAGCTAACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR TCA 90 bp AAGAGTACAAATATGCTGACCTCAGAGAGGCCCAGTGCACTAATGTGTTTCTATAATTCCTTGGGAAGTTaGAGCACAGTAAGACACATC +
Preference number: 2 (lower is better)
Translates to: KSTNMLTSERPSALMCFYNSLGS*STVRHI
Trigger: GATGTGTCTTACTGTGCTTCAACTTCCCAAGGAATT...ATAGAAACACATTAGTGCACTGGGCCTCTCTGAGGTCAGCATATTTGTACTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR TCA 90 bp TTGTCCAAGTTGTCTCTAAACAGACTCCATTCCTTTCTGGTAAGAAAAGTAAGAAAAGTAAGATACAGTTaGAGGACGGCAGGGGAGAAC +
Preference number: 2 (lower is better)
Translates to: LSKLSLNRLHSFLVRKVRKVRYS*RTAGEN
Trigger: GTTCTCCCCTGCCGTCCTTCAACTGTATCTTACTTT...TCTTACTTTTCTTACCAGAAAGGAATGGAGTCTGTTTAGAGACAACTTGGACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR TCA 90 bp GTCATTTCTCACCCTGTTGTTACAGTTAGGTTGACTTTCAATTCCTTGGGAAGTAATTCCTTGGGAAGTTaGAGCACAGTAAGACACATC +
Preference number: 2 (lower is better)
Translates to: VISHPVVTVRLTFNSLGSNSLGS*STVRHI
Trigger: GATGTGTCTTACTGTGCTTCAACTTCCCAAGGAATT...ACTTCCCAAGGAATTGAAAGTCAACCTAACTGTAACAACAGGGTGAGAAATGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR TCA 90 bp GTCATTTCTCACCCTGTTGTTACAGTTAGGTTGACTTTCAATTCCTTGGGAAGTGTCACTGCTAGATCTTaGGAGCACAGATTTCAGTAT +
Preference number: 2 (lower is better)
Translates to: VISHPVVTVRLTFNSLGSVTARS*EHRFQY
Trigger: ATACTGAAATCTGTGCTCTCAAGATCTAGCAGTGAC...ACTTCCCAAGGAATTGAAAGTCAACCTAACTGTAACAACAGGGTGAGAAATGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CCA 90 bp AGTTTGGTCATTTCTCACCCTGTTGTTACAGTTAGGTTGACTTTCAATTCCTTGCTTCGAGCCAGAATCTaGTGCATGTGTCTGAGAAAT +
Preference number: 2 (lower is better)
Translates to: SLVISHPVVTVRLTFNSLLRARI*CMCLRN
Trigger: ATTTCTCAGACACATGCACCAGATTCTGGCTCGAAG...CAAGGAATTGAAAGTCAACCTAACTGTAACAACAGGGTGAGAAATGACCAAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CCA 90 bp TTGTCCAAGTTGTCTCTAAACAGACTCCATTCCTTTCTGGTAAGAAAAGTAAGAAAGTCACGGGCAGTTTaGTCATTTCTCACCCTGTTG +
Preference number: 2 (lower is better)
Translates to: LSKLSLNRLHSFLVRKVRKSRAV*SFLTLL
Trigger: CAACAGGGTGAGAAATGACCAAACTGCCCGTGACTT...TCTTACTTTTCTTACCAGAAAGGAATGGAGTCTGTTTAGAGACAACTTGGACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR CAA 90 bp GTGAAGACTAAAGGAAAGAAGAGATGCACTCACAGGTTGTCCAAGTaGTCTCTAAACAGACTCCATTCCTTTCTGGTAAGAAAAGTAAGA +
Preference number: 2 (lower is better)
Translates to: VKTKGKKRCTHRLSK*SLNRLHSFLVRKVR
Trigger: TCTTACTTTTCTTACCAGAAAGGAATGGAGTCTGTTTAGAGACAACTTGGACAACCTGTGAGTGCATCTCTTCTTTCCTTTAGTCTTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR GCA 90 bp TTGTCCAAGTTGTCTCTAAACAGACTCCATTCCTTTCTGGTAAGAAAAGTAAGACAAAACCTGGCTTTTTaGATTTGCCTTGACTCACGC +
Preference number: 2 (lower is better)
Translates to: LSKLSLNRLHSFLVRKVRQNLAF*ICLDSR
Trigger: GCGTGAGTCAAGGCAAATGCAAAAAGCCAGGTTTTG...TCTTACTTTTCTTACCAGAAAGGAATGGAGTCTGTTTAGAGACAACTTGGACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CCA 90 bp TTGTCCAAGTTGTCTCTAAACAGACTCCATTCCTTTCTGGTAAGAAAAGTAAGACTTCGAGCCAGAATCTaGTGCATGTGTCTGAGAAAT +
Preference number: 2 (lower is better)
Translates to: LSKLSLNRLHSFLVRKVRLRARI*CMCLRN
Trigger: ATTTCTCAGACACATGCACCAGATTCTGGCTCGAAG...TCTTACTTTTCTTACCAGAAAGGAATGGAGTCTGTTTAGAGACAACTTGGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CCA 90 bp GTCATTTCTCACCCTGTTGTTACAGTTAGGTTGACTTTCAATTCCTTGGGAAGTCTCCTTACATGTCAGTaGTTAAAAAGGCAGAGCATA +
Preference number: 2 (lower is better)
Translates to: VISHPVVTVRLTFNSLGSLLTCQ*LKRQSI
Trigger: TATGCTCTGCCTTTTTAACCACTGACATGTAAGGAG...ACTTCCCAAGGAATTGAAAGTCAACCTAACTGTAACAACAGGGTGAGAAATGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR TCA 90 bp TTGTCCAAGTTGTCTCTAAACAGACTCCATTCCTTTCTGGTAAGAAAAGTAAGATTGTTACAGTTAGGTTaGCTTTCAATTCCTTGGGAA +
Preference number: 2 (lower is better)
Translates to: LSKLSLNRLHSFLVRKVRLLQLG*LSIPWE
Trigger: TTCCCAAGGAATTGAAAGTCAACCTAACTGTAACAA...TCTTACTTTTCTTACCAGAAAGGAATGGAGTCTGTTTAGAGACAACTTGGACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR TCA 90 bp TTGTCCAAGTTGTCTCTAAACAGACTCCATTCCTTTCTGGTAAGAAAAGTAAGAGGAAATAAAAATGCATaGGTGAGTGGTAGTCAGTTA +
Preference number: 2 (lower is better)
Translates to: LSKLSLNRLHSFLVRKVRGNKNA*VSGSQL
Trigger: TAACTGACTACCACTCACTCATGCATTTTTATTTCC...TCTTACTTTTCTTACCAGAAAGGAATGGAGTCTGTTTAGAGACAACTTGGACAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR CCA 72 bp GGCTGGCGCAGGCAAAGTCGTGGCGGGCCCGGGGGATaGGTGCCAGGCGGTACTCGCGCTCAAAGCCCTTCT +
Preference number: 3 (lower is better)
Translates to: GWRRQSRGGPGG*VPGGTRAQSPS
Trigger: AGAAGGGCTTTGAGCGCGAGTACCGCCTGGCACCCATCCCCCGGGCCCGCCACGACTTTGCCTGCGCCAGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
3UTR CCA 72 bp ATGCAGACGAAGATCAGGCTGGCGCAGGCAAAGTCGTaGCGGGCCCGGGGGATGGGTGCCAGGCGGTACTCG +
Preference number: 3 (lower is better)
Translates to: MQTKIRLAQAKS*RARGMGARRYS
Trigger: CGAGTACCGCCTGGCACCCATCCCCCGGGCCCGCCACGACTTTGCCTGCGCCAGCCTGATCTTCGTCTGCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
3UTR TCA 72 bp GGCATGCTGCCGCTCCAGCTCCTGGTTCTCGTGCCCTaGGGCGACGCTGAGCCCTGCAGCTGCCATGTACGT +
Preference number: 3 (lower is better)
Translates to: GMLPLQLLVLVP*GDAEPCSCHVR
Trigger: ACGTACATGGCAGCTGCAGGGCTCAGCGTCGCCTCAGGGCACGAGAACCAGGAGCTGGAGCGGCAGCATGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673973.1
3UTR-3UTR CAA 90 bp AGCAACAGAAACCTTCCTGACTTGCCAGGAGAGCCCCCGCCGGGCAGCCCTGGTAGAAACCTTCCTGACTaGCCAGGAGAGCCCCCGCCG +
Preference number: 3 (lower is better)
Translates to: SNRNLPDLPGEPPPGSPGRNLPD*PGEPPP
Trigger: CGGCGGGGGCTCTCCTGGCAAGTCAGGAAGGTTTCT...ACCAGGGCTGCCCGGCGGGGGCTCTCCTGGCAAGTCAGGAAGGTTTCTGTTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CAA 90 bp CAGGTTGATGATGGCCACAGTGAGCAGGCTGCCGATGGTCAGGACGGCCAGGGTCAGCACCTCGAGAACTaGGTGGCAAAGCACAGGCCC +
Preference number: 3 (lower is better)
Translates to: QVDDGHSEQAADGQDGQGQHLEN*VAKHRP
Trigger: GGGCCTGTGCTTTGCCACCAAGTTCTCGAGGTGCTG...ACCCTGGCCGTCCTGACCATCGGCAGCCTGCTCACTGTGGCCATCATCAACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
3UTR-3UTR CAA 90 bp GGCTCACACAGGGCTCTTGTCTTGCTGCTCGCGGCCAGTAGGCCTGTCTCATTGGGCATCAGGGGCAGGTaGATGATGGCCACAGTGAGC +
Preference number: 3 (lower is better)
Translates to: GSHRALVLLLAASRPVSLGIRGR*MMATVS
Trigger: GCTCACTGTGGCCATCATCAACCTGCCCCTGATGCC...CAATGAGACAGGCCTACTGGCCGCGAGCAGCAAGACAAGAGCCCTGTGTGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
3UTR CCA 72 bp CACCCTCTCAGAGATAGTGCAGAGCGTCCCCCGAGCTaGGCAGCACCTCGAGAACTTGGTGGCAAAGCACAG +
Preference number: 3 (lower is better)
Translates to: HPLRDSAERPPS*AAPRELGGKAQ
Trigger: CTGTGCTTTGCCACCAAGTTCTCGAGGTGCTGCCCAGCTCGGGGGACGCTCTGCACTATCTCTGAGAGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
3UTR-3UTR CAA 90 bp GAATGCCTCTGTGAGAAATGCTGTCATTGCCAGGCCCACCAGGGAGAGGGAGTCGCCATCTGCATGCCTTaGGGATTGGCGTGGGGCGGA +
Preference number: 3 (lower is better)
Translates to: ECLCEKCCHCQAHQGEGVAICMP*GLAWGG
Trigger: TCCGCCCCACGCCAATCCCAAAGGCATGCAGATGGC...GACTCCCTCTCCCTGGTGGGCCTGGCAATGACAGCATTTCTCACAGAGGCATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CAA 90 bp CTCTTGTCTTGCTGCTCGCGGCCAGTAGGCCTGTCTCATTGCCAACAGGCAGCTGGCATCAGGGGCAGGTaGATGATGGCCACAGTGAGC +
Preference number: 3 (lower is better)
Translates to: LLSCCSRPVGLSHCQQAAGIRGR*MMATVS
Trigger: GCTCACTGTGGCCATCATCAACCTGCCCCTGATGCC...AGCTGCCTGTTGGCAATGAGACAGGCCTACTGGCCGCGAGCAGCAAGACAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
3UTR CCA 72 bp ACATGCACAGCCATCTGCATGCCTTTGGGATTGGCGTaGGGCGGAGAGTCTTCTCCTGGGCTTGCTTCAGGG +
Preference number: 3 (lower is better)
Translates to: TCTAICMPLGLA*GGESSPGLASG
Trigger: CCCTGAAGCAAGCCCAGGAGAAGACTCTCCGCCCCACGCCAATCCCAAAGGCATGCAGATGGCTGTGCATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR CCA 72 bp ACCAGGCACAGAGCTTCTGGCCTCCCCTGCGCATTATaGCTCAGTGGCTGCTTCGAGCCAGAATCTGGTGCA +
Preference number: 3 (lower is better)
Translates to: TRHRASGLPCAL*LSGCFEPESGA
Trigger: TGCACCAGATTCTGGCTCGAAGCAGCCACTGAGCCATAATGCGCAGGGGAGGCCAGAAGCTCTGTGCCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CAA 90 bp AGAATACACCTGCCCTTCCTCGGGCTGATAAAGCCACACGACACAGCACAGGCAGCCATCTGCATGCCTTaGGGATTGGCGTGGGGCGGA +
Preference number: 3 (lower is better)
Translates to: RIHLPFLGLIKPHDTAQAAICMP*GLAWGG
Trigger: TCCGCCCCACGCCAATCCCAAAGGCATGCAGATGGC...TGCCTGTGCTGTGTCGTGTGGCTTTATCAGCCCGAGGAAGGGCAGGTGTATTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CAA 90 bp GGCTCACACAGGGCTCTTGTCTTGCTGCTCGCGGCCAGTAGGCCTGTCTCATTGAGTAGGCCTGTCTCATaGCCAACAGGCAGCTCTGGA +
Preference number: 3 (lower is better)
Translates to: GSHRALVLLLAASRPVSLSRPVS*PTGSSG
Trigger: TCCAGAGCTGCCTGTTGGCAATGAGACAGGCCTACT...CAATGAGACAGGCCTACTGGCCGCGAGCAGCAAGACAAGAGCCCTGTGTGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
3UTR-3UTR CAA 90 bp TGCTCCCCGCCTTCTTGCTGTGACCACATTCCTCAGGACTCTATCCCCACAGCCAGTCTTCTCCTGGGCTaGCTTCAGGGAAGGAGACTG +
Preference number: 3 (lower is better)
Translates to: CSPPSCCDHIPQDSIPTASLLLG*LQGRRL
Trigger: CAGTCTCCTTCCCTGAAGCAAGCCCAGGAGAAGACT...GGCTGTGGGGATAGAGTCCTGAGGAATGTGGTCACAGCAAGAAGGCGGGGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CAA 90 bp AGAAGCCAACATGCACAGCCATCTGCATGCCTTTGGGATTGGCGTGGGGCGGAGAGTCTTCTCCTGGGCTaGCTTCAGGGAAGGAGACTG +
Preference number: 3 (lower is better)
Translates to: RSQHAQPSACLWDWRGAESLLLG*LQGRRL
Trigger: CAGTCTCCTTCCCTGAAGCAAGCCCAGGAGAAGACT...CTCCGCCCCACGCCAATCCCAAAGGCATGCAGATGGCTGTGCATGTTGGCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CAA 90 bp AGCAACAGAAACCTTCCTGACTTGCCAGGAGAGCCCCCGCCGGGCAGCCCTGGTTCAGCTTACTCCCCCTaGGTGTCTAGAAAAACAGAC +
Preference number: 3 (lower is better)
Translates to: SNRNLPDLPGEPPPGSPGSAYSP*VSRKTD
Trigger: GTCTGTTTTTCTAGACACCAAGGGGGAGTAAGCTGA...ACCAGGGCTGCCCGGCGGGGGCTCTCCTGGCAAGTCAGGAAGGTTTCTGTTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CAA 90 bp AGCAACAGAAACCTTCCTGACTTGCCAGGAGAGCCCCCGCCGGGCAGCCCTGGTAAAGTCACGGGCAGTTaGGTCATTTCTCACCCTGTT +
Preference number: 3 (lower is better)
Translates to: SNRNLPDLPGEPPPGSPGKVTGS*VISHPV
Trigger: AACAGGGTGAGAAATGACCAAACTGCCCGTGACTTT...ACCAGGGCTGCCCGGCGGGGGCTCTCCTGGCAAGTCAGGAAGGTTTCTGTTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CAA 90 bp GAATGCCTCTGTGAGAAATGCTGTCATTGCCAGGCCCACCAGGGAGAGGGAGTCCGGAGGCGGAAGGAGTaGAAGGAGTGCCTGTTGATG +
Preference number: 3 (lower is better)
Translates to: ECLCEKCCHCQAHQGEGVRRRKE*KECLLM
Trigger: CATCAACAGGCACTCCTTCAACTCCTTCCGCCTCCG...GACTCCCTCTCCCTGGTGGGCCTGGCAATGACAGCATTTCTCACAGAGGCATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673973.1
3UTR CCA 72 bp AGCCAACATGCACAGCCATCTGCATGCCTTTGGGATTaGCGTGGGGCGGAGAGTCTTCTCCTGGGCTTGCTT +
Preference number: 3 (lower is better)
Translates to: SQHAQPSACLWD*RGAESLLLGLL
Trigger: AAGCAAGCCCAGGAGAAGACTCTCCGCCCCACGCCAATCCCAAAGGCATGCAGATGGCTGTGCATGTTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR CCA 72 bp CAGAGCTTCTGGCCTCCCCTGCGCATTATGGCTCAGTaGCTGCTTCGAGCCAGAATCTGGTGCATGTGTCTG +
Preference number: 3 (lower is better)
Translates to: QSFWPPLRIMAQ*LLRARIWCMCL
Trigger: CAGACACATGCACCAGATTCTGGCTCGAAGCAGCCACTGAGCCATAATGCGCAGGGGAGGCCAGAAGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR CCA 72 bp ATCAGGCCACGGCATTCACAAGAGTACCCGAGGCCCTaGAGGATGGTGCAGGTCTCCTCGGTAACCTGGATT +
Preference number: 3 (lower is better)
Translates to: IRPRHSQEYPRP*RMVQVSSVTWI
Trigger: AATCCAGGTTACCGAGGAGACCTGCACCATCCTCCAGGGCCTCGGGTACTCTTGTGAATGCCGTGGCCTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673973.1
3UTR-3UTR CAA 90 bp AGCAACAGAAACCTTCCTGACTTGCCAGGAGAGCCCCCGCCGGGCAGCCCTGGTGTCTACCCAGCACCTTaGTGCAAATTAGAATACACC +
Preference number: 3 (lower is better)
Translates to: SNRNLPDLPGEPPPGSPGVYPAP*CKLEYT
Trigger: GGTGTATTCTAATTTGCACAAAGGTGCTGGGTAGAC...ACCAGGGCTGCCCGGCGGGGGCTCTCCTGGCAAGTCAGGAAGGTTTCTGTTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CAA 90 bp AGCAACAGAAACCTTCCTGACTTGCCAGGAGAGCCCCCGCCGGGCAGCCCTGGTGTGGTAGTCAGTTATTaGTTAAACTCCCAACTGGGG +
Preference number: 3 (lower is better)
Translates to: SNRNLPDLPGEPPPGSPGVVVSY*LNSQLG
Trigger: CCCCAGTTGGGAGTTTAACAAATAACTGACTACCAC...ACCAGGGCTGCCCGGCGGGGGCTCTCCTGGCAAGTCAGGAAGGTTTCTGTTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR CCA 72 bp GTCAGCCCCGAACCAGTGAACATTCTCCAGCTGGCCTaGAAACTGTTACAGACCAGGCACAGAGCTTCTGGC +
Preference number: 3 (lower is better)
Translates to: VSPEPVNILQLA*KLLQTRHRASG
Trigger: GCCAGAAGCTCTGTGCCTGGTCTGTAACAGTTTCCAGGCCAGCTGGAGAATGTTCACTGGTTCGGGGCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR CCA 72 bp GGCGGTACTCGCGCTCAAAGCCCTTCTCCAGGAAGATaGACCCAAAGGTGTAGAAGTCATCGGACTTGGAGC +
Preference number: 3 (lower is better)
Translates to: GGTRAQSPSPGR*TQRCRSHRTWS
Trigger: GCTCCAAGTCCGATGACTTCTACACCTTTGGGTCCATCTTCCTGGAGAAGGGCTTTGAGCGCGAGTACCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567277.6
ENST00000673973.1
3UTR-3UTR CAA 90 bp AGCTTCATTTACCAGAATGCCTCTGTGAGAAATGCTGTCATTGCCAGGCCCACCGCCATCTGCATGCCTTaGGGATTGGCGTGGGGCGGA +
Preference number: 3 (lower is better)
Translates to: SFIYQNASVRNAVIARPTAICMP*GLAWGG
Trigger: TCCGCCCCACGCCAATCCCAAAGGCATGCAGATGGC...GGTGGGCCTGGCAATGACAGCATTTCTCACAGAGGCATTCTGGTAAATGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR GCA 72 bp TTGCCTCACAAGCTGCCTCATTCAAAGGCAAGGCTCTaGTGCTCCCCGCCTTCTTGCTGTGACCACATTCCT +
Preference number: 3 (lower is better)
Translates to: LPHKLPHSKARL*CSPPSCCDHIP
Trigger: AGGAATGTGGTCACAGCAAGAAGGCGGGGAGCAGCAGAGCCTTGCCTTTGAATGAGGCAGCTTGTGAGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR GCA 72 bp TTGTCTTGCTGCTCGCGGCCAGTAGGCCTGTCTCATTaGCAACAGGCAGCTCTGGAACTTGGAAAGGCATCA +
Preference number: 3 (lower is better)
Translates to: LSCCSRPVGLSH*QQAALELGKAS
Trigger: TGATGCCTTTCCAAGTTCCAGAGCTGCCTGTTGGCAATGAGACAGGCCTACTGGCCGCGAGCAGCAAGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
3UTR-3UTR CAA 90 bp CACCTGCCCTTCCTCGGGCTGATAAAGCCACACGACACAGCACAGGCAGACAGGCACAGGTTGTCCAAGTaGTCTCTAAACAGACTCCAT +
Preference number: 3 (lower is better)
Translates to: HLPFLGLIKPHDTAQADRHRLSK*SLNRLH
Trigger: ATGGAGTCTGTTTAGAGACAACTTGGACAACCTGTG...CCTGTCTGCCTGTGCTGTGTCGTGTGGCTTTATCAGCCCGAGGAAGGGCAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CAA 90 bp AGCTTCATTTACCAGAATGCCTCTGTGAGAAATGCTGTCATTGCCAGGCCCACCTCCACGCCGCTGAACTaGGGCTTCAGTAGGAGCTCG +
Preference number: 3 (lower is better)
Translates to: SFIYQNASVRNAVIARPTSTPLN*GFSRSS
Trigger: CGAGCTCCTACTGAAGCCCAAGTTCAGCGGCGTGGA...GGTGGGCCTGGCAATGACAGCATTTCTCACAGAGGCATTCTGGTAAATGAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673973.1
3UTR TCA 72 bp GACCACATTCCTCAGGACTCTATCCCCACAGCCAGCTaGCCCCATAAGCTGATGCTAGACAGTAGTCCTCCT +
Preference number: 3 (lower is better)
Translates to: DHIPQDSIPTAS*PHKLMLDSSPP
Trigger: AGGAGGACTACTGTCTAGCATCAGCTTATGGGGTCAGCTGGCTGTGGGGATAGAGTCCTGAGGAATGTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR GCA 72 bp TTCTATGTTATATTAGCAACAGAAACCTTCCTGACTTaGCAGGAGAGCCCCCGCCGGGCAGCCCTGGTCACT +
Preference number: 3 (lower is better)
Translates to: FYVILATETFLT*QESPRRAALVT
Trigger: AGTGACCAGGGCTGCCCGGCGGGGGCTCTCCTGGCAAGTCAGGAAGGTTTCTGTTGCTAATATAACATAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR CCA 72 bp CGCATTATGGCTCAGTGGCTGCTTCGAGCCAGAATCTaGTGCATGTGTCTGAGAAATCCTCCAGTGCAGGTC +
Preference number: 3 (lower is better)
Translates to: RIMAQWLLRARI*CMCLRNPPVQV
Trigger: GACCTGCACTGGAGGATTTCTCAGACACATGCACCAGATTCTGGCTCGAAGCAGCCACTGAGCCATAATGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR CCA 72 bp AGCCCGGGGCAACTCATCCCAGGACCCCAACAAGTCTaGTCAGTCACCCAATCTGCAACCCTGTATAATCAT +
Preference number: 3 (lower is better)
Translates to: SPGQLIPGPQQV*SVTQSATLYNH
Trigger: ATGATTATACAGGGTTGCAGATTGGGTGACTGACCAGACTTGTTGGGGTCCTGGGATGAGTTGCCCCGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CAA 90 bp ACCCCTTTCAGCTTCATTTACCAGAATGCCTCTGTGAGAAATGCTGTCATTGCCGCCATCTGCATGCCTTaGGGATTGGCGTGGGGCGGA +
Preference number: 3 (lower is better)
Translates to: TPFSFIYQNASVRNAVIAAICMP*GLAWGG
Trigger: TCCGCCCCACGCCAATCCCAAAGGCATGCAGATGGC...GGCAATGACAGCATTTCTCACAGAGGCATTCTGGTAAATGAAGCTGAAAGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CAA 90 bp GTTTCAGAGCAAGAACGGCTCAGCATTTGTGAGGGGGCGGGCTTCCCAGATCCATCAGCTTACTCCCCCTaGGTGTCTAGAAAAACAGAC +
Preference number: 3 (lower is better)
Translates to: VSEQERLSICEGAGFPDPSAYSP*VSRKTD
Trigger: GTCTGTTTTTCTAGACACCAAGGGGGAGTAAGCTGA...TGGATCTGGGAAGCCCGCCCCCTCACAAATGCTGAGCCGTTCTTGCTCTGAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CAA 90 bp AGAAGCCAACATGCACAGCCATCTGCATGCCTTTGGGATTGGCGTGGGGCGGAGCTTTTTGCATTTGCCTaGACTCACGCAGTTTCAGAG +
Preference number: 3 (lower is better)
Translates to: RSQHAQPSACLWDWRGAELFAFA*THAVSE
Trigger: CTCTGAAACTGCGTGAGTCAAGGCAAATGCAAAAAG...CTCCGCCCCACGCCAATCCCAAAGGCATGCAGATGGCTGTGCATGTTGGCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CAA 90 bp AGCAACAGAAACCTTCCTGACTTGCCAGGAGAGCCCCCGCCGGGCAGCCCTGGTTCACTGTTTGTTTGTTaGTTAGATACGTGTGTCTGT +
Preference number: 3 (lower is better)
Translates to: SNRNLPDLPGEPPPGSPGSLFVC*LDTCVC
Trigger: ACAGACACACGTATCTAACAAACAAACAAACAGTGA...ACCAGGGCTGCCCGGCGGGGGCTCTCCTGGCAAGTCAGGAAGGTTTCTGTTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR TCA 72 bp AGTGGCTGCTTCGAGCCAGAATCTGGTGCATGTGTCTaGGAAATCCTCCAGTGCAGGTCCAAAGAAGCCAAC +
Preference number: 3 (lower is better)
Translates to: SGCFEPESGACV*EILQCRSKEAN
Trigger: GTTGGCTTCTTTGGACCTGCACTGGAGGATTTCTCAGACACATGCACCAGATTCTGGCTCGAAGCAGCCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR GCA 72 bp GGCCGCACCTTACTTTCAAAGCACCTCTCTCCAGAATaGTTGCCTCACAAGCTGCCTCATTCAAAGGCAAGG +
Preference number: 3 (lower is better)
Translates to: GRTLLSKHLSPE*LPHKLPHSKAR
Trigger: CCTTGCCTTTGAATGAGGCAGCTTGTGAGGCAAGCATTCTGGAGAGAGGTGCTTTGAAAGTAAGGTGCGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CAA 90 bp CCCTTCTTTGTTGACATCGCACTCTGTGTAGAACACTTTGAAGTCCGGCACGGAAGTCTTCTCCTGGGCTaGCTTCAGGGAAGGAGACTG +
Preference number: 3 (lower is better)
Translates to: PFFVDIALCVEHFEVRHGSLLLG*LQGRRL
Trigger: CAGTCTCCTTCCCTGAAGCAAGCCCAGGAGAAGACT...TCCGTGCCGGACTTCAAAGTGTTCTACACAGAGTGCGATGTCAACAAAGAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673973.1
3UTR-3UTR CAA 90 bp CCCTTTCAGCTTCATTTACCAGAATGCCTCTGTGAGAAATGCTGTCATTGCCAGTGCATGCCTTTGGGATaGGCGTGGGGCGGAGAGTCT +
Preference number: 3 (lower is better)
Translates to: PFQLHLPECLCEKCCHCQCMPLG*AWGGES
Trigger: AGACTCTCCGCCCCACGCCAATCCCAAAGGCATGCA...CTGGCAATGACAGCATTTCTCACAGAGGCATTCTGGTAAATGAAGCTGAAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CAA 90 bp CACCTTACTTTCAAAGCACCTCTCTCCAGAATGCTTGCCTCACAAGCTGCCTCAAAAAACAGACCTCACTaGTGCGTGCCCACAGGCCAC +
Preference number: 3 (lower is better)
Translates to: HLTFKAPLSRMLASQAASKNRPH*CVPTGH
Trigger: GTGGCCTGTGGGCACGCACAAGTGAGGTCTGTTTTT...TGAGGCAGCTTGTGAGGCAAGCATTCTGGAGAGAGGTGCTTTGAAAGTAAGGTG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CAA 90 bp AGAATACACCTGCCCTTCCTCGGGCTGATAAAGCCACACGACACAGCACAGGCATCAGCTTACTCCCCCTaGGTGTCTAGAAAAACAGAC +
Preference number: 3 (lower is better)
Translates to: RIHLPFLGLIKPHDTAQASAYSP*VSRKTD
Trigger: GTCTGTTTTTCTAGACACCAAGGGGGAGTAAGCTGA...TGCCTGTGCTGTGTCGTGTGGCTTTATCAGCCCGAGGAAGGGCAGGTGTATTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CAA 90 bp TTAATTTGCAGCCCGGGGCAACTCATCCCAGGACCCCAACAAGTCTGGTCAGTCAAAGTCACGGGCAGTTaGGTCATTTCTCACCCTGTT +
Preference number: 3 (lower is better)
Translates to: LICSPGQLIPGPQQVWSVKVTGS*VISHPV
Trigger: AACAGGGTGAGAAATGACCAAACTGCCCGTGACTTT...GACTGACCAGACTTGTTGGGGTCCTGGGATGAGTTGCCCCGGGCTGCAAATTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CAA 90 bp TTAATTTGCAGCCCGGGGCAACTCATCCCAGGACCCCAACAAGTCTGGTCAGTCCTTTTTGCATTTGCCTaGACTCACGCAGTTTCAGAG +
Preference number: 3 (lower is better)
Translates to: LICSPGQLIPGPQQVWSVLFAFA*THAVSE
Trigger: CTCTGAAACTGCGTGAGTCAAGGCAAATGCAAAAAG...GACTGACCAGACTTGTTGGGGTCCTGGGATGAGTTGCCCCGGGCTGCAAATTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR GCA 72 bp ATTATGGCTCAGTGGCTGCTTCGAGCCAGAATCTGGTaGATGTGTCTGAGAAATCCTCCAGTGCAGGTCCAA +
Preference number: 3 (lower is better)
Translates to: IMAQWLLRARIW*MCLRNPPVQVQ
Trigger: TTGGACCTGCACTGGAGGATTTCTCAGACACATGCACCAGATTCTGGCTCGAAGCAGCCACTGAGCCATAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR GCA 72 bp CCCTTGGTGTCTAGAAAAACAGACCTCACTTGTGCGTaGCCACAGGCCACTGAGGTGGAAGTCTGTTTTCAT +
Preference number: 3 (lower is better)
Translates to: PLVSRKTDLTCA*PQATEVEVCFH
Trigger: ATGAAAACAGACTTCCACCTCAGTGGCCTGTGGGCACGCACAAGTGAGGTCTGTTTTTCTAGACACCAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR GCA 72 bp TTTCAGCTTCATTTACCAGAATGCCTCTGTGAGAAATaGTGTCATTGCCAGGCCCACCAGGGAGAGGGAGTC +
Preference number: 3 (lower is better)
Translates to: FQLHLPECLCEK*CHCQAHQGEGV
Trigger: GACTCCCTCTCCCTGGTGGGCCTGGCAATGACAGCATTTCTCACAGAGGCATTCTGGTAAATGAAGCTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CAA 90 bp TTTGCATTTGCCTTGACTCACGCAGTTTCAGAGCAAGAACGGCTCAGCATTTGTAGTCTTCTCCTGGGCTaGCTTCAGGGAAGGAGACTG +
Preference number: 3 (lower is better)
Translates to: FAFALTHAVSEQERLSICSLLLG*LQGRRL
Trigger: CAGTCTCCTTCCCTGAAGCAAGCCCAGGAGAAGACT...ACAAATGCTGAGCCGTTCTTGCTCTGAAACTGCGTGAGTCAAGGCAAATGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CAA 90 bp TGTAGAACTTTACGGGGTTCATGGGGACACCTAGCTAAGAATCCCTGCTATGTAAAAAACAGACCTCACTaGTGCGTGCCCACAGGCCAC +
Preference number: 3 (lower is better)
Translates to: CRTLRGSWGHLAKNPCYVKNRPH*CVPTGH
Trigger: GTGGCCTGTGGGCACGCACAAGTGAGGTCTGTTTTT...TACATAGCAGGGATTCTTAGCTAGGTGTCCCCATGAACCCCGTAAAGTTCTACA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CAA 90 bp ACTCATCCCAGGACCCCAACAAGTCTGGTCAGTCACCCAATCTGCAACCCTGTAGTGGTAGTCAGTTATTaGTTAAACTCCCAACTGGGG +
Preference number: 3 (lower is better)
Translates to: THPRTPTSLVSHPICNPVVVVSY*LNSQLG
Trigger: CCCCAGTTGGGAGTTTAACAAATAACTGACTACCAC...TACAGGGTTGCAGATTGGGTGACTGACCAGACTTGTTGGGGTCCTGGGATGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CAA 90 bp AATCTGTCTGGAGAGTGTAAGCAGGGTGATGTAGAACAGGACCAGGTAGAAATTAAAAACAGACCTCACTaGTGCGTGCCCACAGGCCAC +
Preference number: 3 (lower is better)
Translates to: NLSGECKQGDVEQDQVEIKNRPH*CVPTGH
Trigger: GTGGCCTGTGGGCACGCACAAGTGAGGTCTGTTTTT...AATTTCTACCTGGTCCTGTTCTACATCACCCTGCTTACACTCTCCAGACAGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673973.1
3UTR-3UTR CAA 90 bp GTTTCAGAGCAAGAACGGCTCAGCATTTGTGAGGGGGCGGGCTTCCCAGATCCATTTCTCTCTACCTGTTaGAAACCGTTTACAGATGTA +
Preference number: 3 (lower is better)
Translates to: VSEQERLSICEGAGFPDPFLSTC*KPFTDV
Trigger: TACATCTGTAAACGGTTTCAAACAGGTAGAGAGAAA...TGGATCTGGGAAGCCCGCCCCCTCACAAATGCTGAGCCGTTCTTGCTCTGAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CAA 90 bp TGTAGAACTTTACGGGGTTCATGGGGACACCTAGCTAAGAATCCCTGCTATGTACTCTCTCCAGAATGCTaGCCTCACAAGCTGCCTCAT +
Preference number: 3 (lower is better)
Translates to: CRTLRGSWGHLAKNPCYVLSPEC*PHKLPH
Trigger: ATGAGGCAGCTTGTGAGGCAAGCATTCTGGAGAGAG...TACATAGCAGGGATTCTTAGCTAGGTGTCCCCATGAACCCCGTAAAGTTCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CAA 90 bp TTTGCATTTGCCTTGACTCACGCAGTTTCAGAGCAAGAACGGCTCAGCATTTGTCTCTCTCCAGAATGCTaGCCTCACAAGCTGCCTCAT +
Preference number: 3 (lower is better)
Translates to: FAFALTHAVSEQERLSICLSPEC*PHKLPH
Trigger: ATGAGGCAGCTTGTGAGGCAAGCATTCTGGAGAGAG...ACAAATGCTGAGCCGTTCTTGCTCTGAAACTGCGTGAGTCAAGGCAAATGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CAA 90 bp TTAATTTGCAGCCCGGGGCAACTCATCCCAGGACCCCAACAAGTCTGGTCAGTCGTTGTTACAGTTAGGTaGACTTTCAATTCCTTGGGA +
Preference number: 3 (lower is better)
Translates to: LICSPGQLIPGPQQVWSVVVTVR*TFNSLG
Trigger: TCCCAAGGAATTGAAAGTCAACCTAACTGTAACAAC...GACTGACCAGACTTGTTGGGGTCCTGGGATGAGTTGCCCCGGGCTGCAAATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CAA 90 bp CACCTTACTTTCAAAGCACCTCTCTCCAGAATGCTTGCCTCACAAGCTGCCTCAATTGTAAGGAAGTCCTaGACCCATGGAGAAGGTCAC +
Preference number: 3 (lower is better)
Translates to: HLTFKAPLSRMLASQAASIVRKS*THGEGH
Trigger: GTGACCTTCTCCATGGGTCAAGGACTTCCTTACAAT...TGAGGCAGCTTGTGAGGCAAGCATTCTGGAGAGAGGTGCTTTGAAAGTAAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CAA 90 bp AATCTGTCTGGAGAGTGTAAGCAGGGTGATGTAGAACAGGACCAGGTAGAAATTAGTAGGCCTGTCTCATaGCCAACAGGCAGCTCTGGA +
Preference number: 3 (lower is better)
Translates to: NLSGECKQGDVEQDQVEISRPVS*PTGSSG
Trigger: TCCAGAGCTGCCTGTTGGCAATGAGACAGGCCTACT...AATTTCTACCTGGTCCTGTTCTACATCACCCTGCTTACACTCTCCAGACAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673973.1
3UTR-3UTR CAA 90 bp AGGCTCCTGTATGCAAGACTTTGTGTAGAACTTTACGGGGTTCATGGGGACACCAAAAGTAAGATACAGTaGAAGGACGGCAGGGGAGAA +
Preference number: 3 (lower is better)
Translates to: RLLYARLCVELYGVHGDTKSKIQ*KDGRGE
Trigger: TTCTCCCCTGCCGTCCTTCAACTGTATCTTACTTTT...GGTGTCCCCATGAACCCCGTAAAGTTCTACACAAAGTCTTGCATACAGGAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CAA 90 bp CTGTTTTCATCATGTGCTAAAGTTGCCTGCCTGGCACCTCAGGGAACAAAGATCAAAGTCACGGGCAGTTaGGTCATTTCTCACCCTGTT +
Preference number: 3 (lower is better)
Translates to: LFSSCAKVACLAPQGTKIKVTGS*VISHPV
Trigger: AACAGGGTGAGAAATGACCAAACTGCCCGTGACTTT...GATCTTTGTTCCCTGAGGTGCCAGGCAGGCAACTTTAGCACATGATGAAAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CAA 90 bp CACCTTACTTTCAAAGCACCTCTCTCCAGAATGCTTGCCTCACAAGCTGCCTCACCTGTATGCAAGACTTaGTGTAGAACTTTACGGGGT +
Preference number: 3 (lower is better)
Translates to: HLTFKAPLSRMLASQAASPVCKT*CRTLRG
Trigger: ACCCCGTAAAGTTCTACACAAAGTCTTGCATACAGG...TGAGGCAGCTTGTGAGGCAAGCATTCTGGAGAGAGGTGCTTTGAAAGTAAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CAA 90 bp TTCTATGTTATATTAGCAACAGAAACCTTCCTGACTTGCCAGGAGAGCCCCCGCAGATGCACTCACAGGTaGTCCAAGTTGTCTCTAAAC +
Preference number: 3 (lower is better)
Translates to: FYVILATETFLTCQESPRRCTHR*SKLSLN
Trigger: GTTTAGAGACAACTTGGACAACCTGTGAGTGCATCT...GCGGGGGCTCTCCTGGCAAGTCAGGAAGGTTTCTGTTGCTAATATAACATAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CAA 90 bp TTCTATGTTATATTAGCAACAGAAACCTTCCTGACTTGCCAGGAGAGCCCCCGCCTTTTTGCATTTGCCTaGACTCACGCAGTTTCAGAG +
Preference number: 3 (lower is better)
Translates to: FYVILATETFLTCQESPRLFAFA*THAVSE
Trigger: CTCTGAAACTGCGTGAGTCAAGGCAAATGCAAAAAG...GCGGGGGCTCTCCTGGCAAGTCAGGAAGGTTTCTGTTGCTAATATAACATAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CAA 90 bp CCTTACTTTCAAAGCACCTCTCTCCAGAATGCTTGCCTCACAAGCTGCCTCATTGTCTACCCAGCACCTTaGTGCAAATTAGAATACACC +
Preference number: 3 (lower is better)
Translates to: PYFQSTSLQNACLTSCLIVYPAP*CKLEYT
Trigger: GGTGTATTCTAATTTGCACAAAGGTGCTGGGTAGAC...AATGAGGCAGCTTGTGAGGCAAGCATTCTGGAGAGAGGTGCTTTGAAAGTAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CAA 90 bp ACTCATCCCAGGACCCCAACAAGTCTGGTCAGTCACCCAATCTGCAACCCTGTAAAGGTCACTGTTTGTTaGTTTGTTAGATACGTGTGT +
Preference number: 3 (lower is better)
Translates to: THPRTPTSLVSHPICNPVKVTVC*FVRYVC
Trigger: ACACACGTATCTAACAAACAAACAAACAGTGACCTT...TACAGGGTTGCAGATTGGGTGACTGACCAGACTTGTTGGGGTCCTGGGATGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR TCA 72 bp CTTCTATTCATACTGATTCCACTTATGTGCAGCACATaGGAGCTGCCACTAGTCTACCCAGCACCTTTGTGC +
Preference number: 3 (lower is better)
Translates to: LLFILIPLMCST*ELPLVYPAPLC
Trigger: GCACAAAGGTGCTGGGTAGACTAGTGGCAGCTCTCATGTGCTGCACATAAGTGGAATCAGTATGAATAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR GCA 72 bp GGTGGAAGTCTGTTTTCATCATGTGCTAAAGTTGCCTaGCTGGCACCTCAGGGAACAAAGATCTCAAAGTCA +
Preference number: 3 (lower is better)
Translates to: GGSLFSSCAKVA*LAPQGTKISKS
Trigger: TGACTTTGAGATCTTTGTTCCCTGAGGTGCCAGGCAGGCAACTTTAGCACATGATGAAAACAGACTTCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR GCA 72 bp TTACGGGGTTCATGGGGACACCTAGCTAAGAATCCCTaGTATGTAGGGAAACTGAGTGCATTAGAAATCCTG +
Preference number: 3 (lower is better)
Translates to: LRGSWGHLAKNP*YVGKLSALEIL
Trigger: CAGGATTTCTAATGCACTCAGTTTCCCTACATAGCAGGGATTCTTAGCTAGGTGTCCCCATGAACCCCGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR CCA 72 bp GTATGCAAGACTTTGTGTAGAACTTTACGGGGTTCATaGGGACACCTAGCTAAGAATCCCTGCTATGTAGGG +
Preference number: 3 (lower is better)
Translates to: VCKTLCRTLRGS*GHLAKNPCYVG
Trigger: CCCTACATAGCAGGGATTCTTAGCTAGGTGTCCCCATGAACCCCGTAAAGTTCTACACAAAGTCTTGCATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CAA 90 bp GTGATGAGGCCACCGGTTAAGTCTTCCGGTTATGAAGTCCATTCAGAAAAAGTCAAAAGTAAGATACAGTaGAAGGACGGCAGGGGAGAA +
Preference number: 3 (lower is better)
Translates to: VMRPPVKSSGYEVHSEKVKSKIQ*KDGRGE
Trigger: TTCTCCCCTGCCGTCCTTCAACTGTATCTTACTTTT...GACTTTTTCTGAATGGACTTCATAACCGGAAGACTTAACCGGTGGCCTCATCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CAA 90 bp CAAAACCTGGCTTTTTGCATTTGCCTTGACTCACGCAGTTTCAGAGCAAGAACGCTTTTTGCATTTGCCTaGACTCACGCAGTTTCAGAG +
Preference number: 3 (lower is better)
Translates to: QNLAFCICLDSRSFRARTLFAFA*THAVSE
Trigger: CTCTGAAACTGCGTGAGTCAAGGCAAATGCAAAAAG...CGTTCTTGCTCTGAAACTGCGTGAGTCAAGGCAAATGCAAAAAGCCAGGTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CAA 90 bp CTGTTTTCATCATGTGCTAAAGTTGCCTGCCTGGCACCTCAGGGAACAAAGATCCAATTCCTTGGGAAGTaGAAGCACAGTAAGACACAT +
Preference number: 3 (lower is better)
Translates to: LFSSCAKVACLAPQGTKIQFLGK*KHSKTH
Trigger: ATGTGTCTTACTGTGCTTCAACTTCCCAAGGAATTG...GATCTTTGTTCCCTGAGGTGCCAGGCAGGCAACTTTAGCACATGATGAAAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CAA 90 bp CCCTTTCAGCTTCATTTACCAGAATGCCTCTGTGAGAAATGCTGTCATTGCCAGGTGGTAGTCAGTTATTaGTTAAACTCCCAACTGGGG +
Preference number: 3 (lower is better)
Translates to: PFQLHLPECLCEKCCHCQVVVSY*LNSQLG
Trigger: CCCCAGTTGGGAGTTTAACAAATAACTGACTACCAC...CTGGCAATGACAGCATTTCTCACAGAGGCATTCTGGTAAATGAAGCTGAAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CAA 90 bp CACCTTACTTTCAAAGCACCTCTCTCCAGAATGCTTGCCTCACAAGCTGCCTCATTTCTCTCTACCTGTTaGAAACCGTTTACAGATGTA +
Preference number: 3 (lower is better)
Translates to: HLTFKAPLSRMLASQAASFLSTC*KPFTDV
Trigger: TACATCTGTAAACGGTTTCAAACAGGTAGAGAGAAA...TGAGGCAGCTTGTGAGGCAAGCATTCTGGAGAGAGGTGCTTTGAAAGTAAGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CAA 90 bp AGTTTGGTCATTTCTCACCCTGTTGTTACAGTTAGGTTGACTTTCAATTCCTTGCACTCCAGCCCTTCTTaGTTGACATCGCACTCTGTG +
Preference number: 3 (lower is better)
Translates to: SLVISHPVVTVRLTFNSLHSSPS*LTSHSV
Trigger: CACAGAGTGCGATGTCAACAAAGAAGGGCTGGAGTG...CAAGGAATTGAAAGTCAACCTAACTGTAACAACAGGGTGAGAAATGACCAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673973.1
3UTR-3UTR CAA 90 bp GTCATTTCTCACCCTGTTGTTACAGTTAGGTTGACTTTCAATTCCTTGGGAAGTATTGTAAGGAAGTCCTaGACCCATGGAGAAGGTCAC +
Preference number: 3 (lower is better)
Translates to: VISHPVVTVRLTFNSLGSIVRKS*THGEGH
Trigger: GTGACCTTCTCCATGGGTCAAGGACTTCCTTACAAT...ACTTCCCAAGGAATTGAAAGTCAACCTAACTGTAACAACAGGGTGAGAAATGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CAA 90 bp GTCATTTCTCACCCTGTTGTTACAGTTAGGTTGACTTTCAATTCCTTGGGAAGTTCCTCGTGCTCCTTCTaGAACTTCTTCTTCCATAGG +
Preference number: 3 (lower is better)
Translates to: VISHPVVTVRLTFNSLGSSSCSF*NFFFHR
Trigger: CCTATGGAAGAAGAAGTTCAAGAAGGAGCACGAGGA...ACTTCCCAAGGAATTGAAAGTCAACCTAACTGTAACAACAGGGTGAGAAATGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673973.1
3UTR-3UTR CAA 90 bp TTTGCATTTGCCTTGACTCACGCAGTTTCAGAGCAAGAACGGCTCAGCATTTGTTTTCTCTCTACCTGTTaGAAACCGTTTACAGATGTA +
Preference number: 3 (lower is better)
Translates to: FAFALTHAVSEQERLSICFLSTC*KPFTDV
Trigger: TACATCTGTAAACGGTTTCAAACAGGTAGAGAGAAA...ACAAATGCTGAGCCGTTCTTGCTCTGAAACTGCGTGAGTCAAGGCAAATGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CAA 90 bp GTCATTTCTCACCCTGTTGTTACAGTTAGGTTGACTTTCAATTCCTTGGGAAGTCACAGGTTGTCCAAGTaGTCTCTAAACAGACTCCAT +
Preference number: 3 (lower is better)
Translates to: VISHPVVTVRLTFNSLGSHRLSK*SLNRLH
Trigger: ATGGAGTCTGTTTAGAGACAACTTGGACAACCTGTG...ACTTCCCAAGGAATTGAAAGTCAACCTAACTGTAACAACAGGGTGAGAAATGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CAA 90 bp GTCATTTCTCACCCTGTTGTTACAGTTAGGTTGACTTTCAATTCCTTGGGAAGTCCTGTATGCAAGACTTaGTGTAGAACTTTACGGGGT +
Preference number: 3 (lower is better)
Translates to: VISHPVVTVRLTFNSLGSPVCKT*CRTLRG
Trigger: ACCCCGTAAAGTTCTACACAAAGTCTTGCATACAGG...ACTTCCCAAGGAATTGAAAGTCAACCTAACTGTAACAACAGGGTGAGAAATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CAA 90 bp GTCATTTCTCACCCTGTTGTTACAGTTAGGTTGACTTTCAATTCCTTGGGAAGTATAAACCCTAGTTACTaGCATGCACCACCTCAAATC +
Preference number: 3 (lower is better)
Translates to: VISHPVVTVRLTFNSLGSINPSY*HAPPQI
Trigger: GATTTGAGGTGGTGCATGCAAGTAACTAGGGTTTAT...ACTTCCCAAGGAATTGAAAGTCAACCTAACTGTAACAACAGGGTGAGAAATGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
3UTR-3UTR CAA 90 bp TTGTCCAAGTTGTCTCTAAACAGACTCCATTCCTTTCTGGTAAGAAAAGTAAGAAGATGCACTCACAGGTaGTCCAAGTTGTCTCTAAAC +
Preference number: 3 (lower is better)
Translates to: LSKLSLNRLHSFLVRKVRRCTHR*SKLSLN
Trigger: GTTTAGAGACAACTTGGACAACCTGTGAGTGCATCT...TCTTACTTTTCTTACCAGAAAGGAATGGAGTCTGTTTAGAGACAACTTGGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CAA 90 bp TTGTCCAAGTTGTCTCTAAACAGACTCCATTCCTTTCTGGTAAGAAAAGTAAGACCTGTATGCAAGACTTaGTGTAGAACTTTACGGGGT +
Preference number: 3 (lower is better)
Translates to: LSKLSLNRLHSFLVRKVRPVCKT*CRTLRG
Trigger: ACCCCGTAAAGTTCTACACAAAGTCTTGCATACAGG...TCTTACTTTTCTTACCAGAAAGGAATGGAGTCTGTTTAGAGACAACTTGGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR TCA 72 bp GAAATTCCTTTATACAGCAAGTTCTTCTATTCATACTaGTTCCACTTATGTGCAGCACATGAGAGCTGCCAC +
Preference number: 3 (lower is better)
Translates to: EIPLYSKFFYSY*FHLCAAHESCH
Trigger: GTGGCAGCTCTCATGTGCTGCACATAAGTGGAATCAGTATGAATAGAAGAACTTGCTGTATAAAGGAATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR GCA 72 bp AACTTAAGCGAGGCTAATTGCCCTTACCAGCATTGTTaGCATGAAATTCCTTTATACAGCAAGTTCTTCTAT +
Preference number: 3 (lower is better)
Translates to: NLSEANCPYQHC*HEIPLYSKFFY
Trigger: ATAGAAGAACTTGCTGTATAAAGGAATTTCATGGCAACAATGCTGGTAAGGGCAATTAGCCTCGCTTAAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
3UTR-3UTR CAA 90 bp TTGTCCAAGTTGTCTCTAAACAGACTCCATTCCTTTCTGGTAAGAAAAGTAAGATCACTGTTTGTTTGTTaGTTAGATACGTGTGTCTGT +
Preference number: 3 (lower is better)
Translates to: LSKLSLNRLHSFLVRKVRSLFVC*LDTCVC
Trigger: ACAGACACACGTATCTAACAAACAAACAAACAGTGA...TCTTACTTTTCTTACCAGAAAGGAATGGAGTCTGTTTAGAGACAACTTGGACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp GAAGATCAGGCTGGCGCAGGCAAAGTCGTGGCGGGCCCGGGGGATGGGTGCCAGTTGGCTGGGCGGGGGTaGCTGCTGGCTCCGGGGGTC +
Preference number: 4 (lower is better)
Translates to: EDQAGAGKVVAGPGDGCQLAGRG*LLAPGV
Trigger: GACCCCCGGAGCCAGCAGCCACCCCCGCCCAGCCAA...CTGGCACCCATCCCCCGGGCCCGCCACGACTTTGCCTGCGCCAGCCTGATCTTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000567277.6
ENST00000673973.1
CDS-3UTR GCA 90 bp GAGCGTCCCCCGAGCTGGGCAGCACCTCGAGAACTTGGTGGCAAAGCACAGGCCGGCCCGGGGGATGGGTaGCAGGCGGTACTCGCGCTC +
Preference number: 4 (lower is better)
Translates to: ERPPSWAAPRELGGKAQAGPGDG*QAVLAL
Trigger: GAGCGCGAGTACCGCCTGGCACCCATCCCCCGGGCC...GGCCTGTGCTTTGCCACCAAGTTCTCGAGGTGCTGCCCAGCTCGGGGGACGCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp GTCCCCCGAGCTGGGCAGCACCTCGAGAACTTGGTGGCAAAGCACAGGCCCAGCGGCCTGGGGAGGTGTTaGCTGGGCGGGGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: VPRAGQHLENLVAKHRPSGLGRC*LGGGGC
Trigger: GCAGCCACCCCCGCCCAGCCAACACCTCCCCAGGCC...GCTGGGCCTGTGCTTTGCCACCAAGTTCTCGAGGTGCTGCCCAGCTCGGGGGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp TGCAGACGAAGATCAGGCTGGCGCAGGCAAAGTCGTGGCGGGCCCGGGGGATGGGGAGGTGGGAGGCAGTaGAGACGGCCCCAACGGCGA +
Preference number: 4 (lower is better)
Translates to: CRRRSGWRRQSRGGPGGWGGGRQ*RRPQRR
Trigger: TCGCCGTTGGGGCCGTCTCCACTGCCTCCCACCTCC...CCATCCCCCGGGCCCGCCACGACTTTGCCTGCGCCAGCCTGATCTTCGTCTGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp TGCAGACGAAGATCAGGCTGGCGCAGGCAAAGTCGTGGCGGGCCCGGGGGATGGACGCAGTTCCGGGCGTaGGTAGGCAGCGACACGGGC +
Preference number: 4 (lower is better)
Translates to: CRRRSGWRRQSRGGPGGWTQFRA*VGSDTG
Trigger: GCCCGTGTCGCTGCCTACCCACGCCCGGAACTGCGT...CCATCCCCCGGGCCCGCCACGACTTTGCCTGCGCCAGCCTGATCTTCGTCTGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp GAGCGTCCCCCGAGCTGGGCAGCACCTCGAGAACTTGGTGGCAAAGCACAGGCCTGGGGAGGTGTTGGCTaGGCGGGGGTGGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: ERPPSWAAPRELGGKAQAWGGVG*AGVAAG
Trigger: GCCAGCAGCCACCCCCGCCCAGCCAACACCTCCCCA...GGCCTGTGCTTTGCCACCAAGTTCTCGAGGTGCTGCCCAGCTCGGGGGACGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000567277.6
ENST00000673973.1
CDS-3UTR GCA 90 bp GACGAAGATCAGGCTGGCGCAGGCAAAGTCGTGGCGGGCCCGGGGGATGGGTGCGTGGCCTCCCGCACCTaGTTGATGGCCTGGCACATG +
Preference number: 4 (lower is better)
Translates to: DEDQAGAGKVVAGPGDGCVASRT*LMAWHM
Trigger: CATGTGCCAGGCCATCAAGCAGGTGCGGGAGGCCAC...GCACCCATCCCCCGGGCCCGCCACGACTTTGCCTGCGCCAGCCTGATCTTCGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR GCA 90 bp ATGCAGACGAAGATCAGGCTGGCGCAGGCAAAGTCGTGGCGGGCCCGGGGGATGGTGGCCTCCGTGATGTaGACCCGGCCGGGTACTCCG +
Preference number: 4 (lower is better)
Translates to: MQTKIRLAQAKSWRARGMVASVM*TRPGTP
Trigger: CGGAGTACCCGGCCGGGTGCACATCACGGAGGCCAC...CATCCCCCGGGCCCGCCACGACTTTGCCTGCGCCAGCCTGATCTTCGTCTGCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR GCA 90 bp GGGGATGGGTGCCAGGCGGTACTCGCGCTCAAAGCCCTTCTCCAGGAAGATGGACTGGGCGGGGGTGGCTaGTGGCTCCGGGGGTCGATG +
Preference number: 4 (lower is better)
Translates to: GDGCQAVLALKALLQEDGLGGGG*WLRGSM
Trigger: CATCGACCCCCGGAGCCAGCAGCCACCCCCGCCCAG...TCCATCTTCCTGGAGAAGGGCTTTGAGCGCGAGTACCGCCTGGCACCCATCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000567277.6
ENST00000673973.1
CDS-3UTR GCA 90 bp GGATGGGTGCCAGGCGGTACTCGCGCTCAAAGCCCTTCTCCAGGAAGATGGACCGGCCCGGGGGATGGGTaGCAGGCGGTACTCGCGCTC +
Preference number: 4 (lower is better)
Translates to: GWVPGGTRAQSPSPGRWTGPGDG*QAVLAL
Trigger: GAGCGCGAGTACCGCCTGGCACCCATCCCCCGGGCC...GGTCCATCTTCCTGGAGAAGGGCTTTGAGCGCGAGTACCGCCTGGCACCCATCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR GCA 90 bp TGGCGGGCCCGGGGGATGGGTGCCAGGCGGTACTCGCGCTCAAAGCCCTTCTCCACAGGGCTCTTGTCTTaGTGCTCGCGGCCAGTAGGC +
Preference number: 4 (lower is better)
Translates to: WRARGMGARRYSRSKPFSTGLLS*CSRPVG
Trigger: GCCTACTGGCCGCGAGCAGCAAGACAAGAGCCCTGT...GGAGAAGGGCTTTGAGCGCGAGTACCGCCTGGCACCCATCCCCCGGGCCCGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR GCA 90 bp TGGCGGGCCCGGGGGATGGGTGCCAGGCGGTACTCGCGCTCAAAGCCCTTCTCCCTGGGGAACGCTCACTaGTCACGCTCTCACGGTGGT +
Preference number: 4 (lower is better)
Translates to: WRARGMGARRYSRSKPFSLGNAH*SRSHGG
Trigger: ACCACCGTGAGAGCGTGAGCAGTGAGCGTTCCCCAG...GGAGAAGGGCTTTGAGCGCGAGTACCGCCTGGCACCCATCCCCCGGGCCCGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp GATGGGTGCCAGGCGGTACTCGCGCTCAAAGCCCTTCTCCAGGAAGATGGACCCTTGGCTGGGCGGGGGTaGCTGCTGGCTCCGGGGGTC +
Preference number: 4 (lower is better)
Translates to: DGCQAVLALKALLQEDGPLAGRG*LLAPGV
Trigger: GACCCCCGGAGCCAGCAGCCACCCCCGCCCAGCCAA...GGGTCCATCTTCCTGGAGAAGGGCTTTGAGCGCGAGTACCGCCTGGCACCCATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp GGGCTGTGTCTCCACCCTCTCAGAGATAGTGCAGAGCGTCCCCCGAGCTGGGCATGGGGAGGTGTTGGCTaGGCGGGGGTGGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: GLCLHPLRDSAERPPSWAWGGVG*AGVAAG
Trigger: GCCAGCAGCCACCCCCGCCCAGCCAACACCTCCCCA...TGCCCAGCTCGGGGGACGCTCTGCACTATCTCTGAGAGGGTGGAGACACAGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp AGCAGGGGCTGTGTCTCCACCCTCTCAGAGATAGTGCAGAGCGTCCCCCGAGCTGGGCCGCGTCCCCCTTaGGCCTGGGGAGGTGTTGGC +
Preference number: 4 (lower is better)
Translates to: SRGCVSTLSEIVQSVPRAGPRPP*AWGGVG
Trigger: GCCAACACCTCCCCAGGCCCAAGGGGGACGCGGCCC...AGCTCGGGGGACGCTCTGCACTATCTCTGAGAGGGTGGAGACACAGCCCCTGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000567277.6
ENST00000673973.1
CDS-3UTR TCA 90 bp ATGATGGCCACAGTGAGCAGGCTGCCGATGGTCAGGACGGCCAGGGTCAGCCTCCCGGGTCATGCGCACTaGCGCCCGCATCTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: MMATVSRLPMVRTARVSLPGHAH*RPHLQG
Trigger: GCCCTGAAGATGCGGGCGTCAGTGCGCATGACCCGG...GAGGCTGACCCTGGCCGTCCTGACCATCGGCAGCCTGCTCACTGTGGCCATCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567277.6
ENST00000673973.1
CDS-3UTR GCA 90 bp CGAGCTGGGCAGCACCTCGAGAACTTGGTGGCAAAGCACAGGCCCAGCACCAGCGCCGGGTACTCCGGCTaGCTCCATCCGGTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: RAGQHLENLVAKHRPSTSAGYSG*LHPVGQ
Trigger: CTGGCCAACCGGATGGAGGCAGCCGGAGTACCCGGC...GCTGGTGCTGGGCCTGTGCTTTGCCACCAAGTTCTCGAGGTGCTGCCCAGCTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR GCA 90 bp AACGGCTCAGCATTTGTGAGGGGGCGGGCTTCCCAGATCCAGGAGCCTCTGCATCTGGGCGGGGGTGGCTaGTGGCTCCGGGGGTCGATG +
Preference number: 4 (lower is better)
Translates to: NGSAFVRGRASQIQEPLHLGGGG*WLRGSM
Trigger: CATCGACCCCCGGAGCCAGCAGCCACCCCCGCCCAG...ATGCAGAGGCTCCTGGATCTGGGAAGCCCGCCCCCTCACAAATGCTGAGCCGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp GGGGATGGGTGCCAGGCGGTACTCGCGCTCAAAGCCCTTCTCCAGGAAGATGGAGCAGGCAAGCAGGGCTaGGGAGAGGGCCTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GDGCQAVLALKALLQEDGAGKQG*GEGLWA
Trigger: GGCCCAGAGGCCCTCTCCCCAGCCCTGCTTGCCTGC...TCCATCTTCCTGGAGAAGGGCTTTGAGCGCGAGTACCGCCTGGCACCCATCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537579.5
ENST00000673973.1
CDS-3UTR CCA 90 bp CACACCCAGTGCCGCCGTCCTGGGCATGAGCAGGACATGGACGAGCAGGATGCAGGAGGTGGGAGGCAGTaGAGACGGCCCCAACGGCGA +
Preference number: 4 (lower is better)
Translates to: HTQCRRPGHEQDMDEQDAGGGRQ*RRPQRR
Trigger: TCGCCGTTGGGGCCGTCTCCACTGCCTCCCACCTCC...TGCATCCTGCTCGTCCATGTCCTGCTCATGCCCAGGACGGCGGCACTGGGTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp CACACCCAGTGCCGCCGTCCTGGGCATGAGCAGGACATGGACGAGCAGGATGCAACGCAGTTCCGGGCGTaGGTAGGCAGCGACACGGGC +
Preference number: 4 (lower is better)
Translates to: HTQCRRPGHEQDMDEQDATQFRA*VGSDTG
Trigger: GCCCGTGTCGCTGCCTACCCACGCCCGGAACTGCGT...TGCATCCTGCTCGTCCATGTCCTGCTCATGCCCAGGACGGCGGCACTGGGTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp CCCCGAGCTGGGCAGCACCTCGAGAACTTGGTGGCAAAGCACAGGCCCAGCACCCTGCCTCCATCCGGTTaGCCAGGGACACGTCGTGGG +
Preference number: 4 (lower is better)
Translates to: PRAGQHLENLVAKHRPSTLPPSG*PGTRRG
Trigger: CCCACGACGTGTCCCTGGCCAACCGGATGGAGGCAG...GGTGCTGGGCCTGTGCTTTGCCACCAAGTTCTCGAGGTGCTGCCCAGCTCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp AGAACTTGGTGGCAAAGCACAGGCCCAGCACCAGCCCCAGTACACAGGCCACCAGGCGGGGGTGGCTGCTaGCTCCGGGGGTCGATGACC +
Preference number: 4 (lower is better)
Translates to: RTWWQSTGPAPAPVHRPPGGGGC*LRGSMT
Trigger: GGTCATCGACCCCCGGAGCCAGCAGCCACCCCCGCC...TGGTGGCCTGTGTACTGGGGCTGGTGCTGGGCCTGTGCTTTGCCACCAAGTTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp AACGGCTCAGCATTTGTGAGGGGGCGGGCTTCCCAGATCCAGGAGCCTCTGCATTTGGCTGGGCGGGGGTaGCTGCTGGCTCCGGGGGTC +
Preference number: 4 (lower is better)
Translates to: NGSAFVRGRASQIQEPLHLAGRG*LLAPGV
Trigger: GACCCCCGGAGCCAGCAGCCACCCCCGCCCAGCCAA...ATGCAGAGGCTCCTGGATCTGGGAAGCCCGCCCCCTCACAAATGCTGAGCCGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp GGGGATGGGTGCCAGGCGGTACTCGCGCTCAAAGCCCTTCTCCAGGAAGATGGACGTCCCCCTTGGGCCTaGGGAGGTGTTGGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: GDGCQAVLALKALLQEDGRPPWA*GGVGWA
Trigger: CGCCCAGCCAACACCTCCCCAGGCCCAAGGGGGACG...TCCATCTTCCTGGAGAAGGGCTTTGAGCGCGAGTACCGCCTGGCACCCATCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp GTCTTGCTGCTCGCGGCCAGTAGGCCTGTCTCATTGCCAACAGGCAGCTCTGGAGGGCCGCGTCCCCCTTaGGCCTGGGGAGGTGTTGGC +
Preference number: 4 (lower is better)
Translates to: VLLLAASRPVSLPTGSSGGPRPP*AWGGVG
Trigger: GCCAACACCTCCCCAGGCCCAAGGGGGACGCGGCCC...TCCAGAGCTGCCTGTTGGCAATGAGACAGGCCTACTGGCCGCGAGCAGCAAGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp CCCCGAGCTGGGCAGCACCTCGAGAACTTGGTGGCAAAGCACAGGCCCAGCACCGGACATGCTTCTGTCTaGGGTCCGGCGGTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: PRAGQHLENLVAKHRPSTGHASV*GPAVAL
Trigger: CAGCGCCACCGCCGGACCCCAGACAGAAGCATGTCC...GGTGCTGGGCCTGTGCTTTGCCACCAAGTTCTCGAGGTGCTGCCCAGCTCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp TCAGCATTTGTGAGGGGGCGGGCTTCCCAGATCCAGGAGCCTCTGCATGCACCCGCGCAGGCAAAGTCGTaGCGGGCCCGGGGGATGGGT +
Preference number: 4 (lower is better)
Translates to: SAFVRGRASQIQEPLHAPAQAKS*RARGMG
Trigger: ACCCATCCCCCGGGCCCGCCACGACTTTGCCTGCGC...GGGTGCATGCAGAGGCTCCTGGATCTGGGAAGCCCGCCCCCTCACAAATGCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp GGATGGGTGCCAGGCGGTACTCGCGCTCAAAGCCCTTCTCCAGGAAGATGGACCGCGCAGGCAAAGTCGTaGCGGGCCCGGGGGATGGGT +
Preference number: 4 (lower is better)
Translates to: GWVPGGTRAQSPSPGRWTAQAKS*RARGMG
Trigger: ACCCATCCCCCGGGCCCGCCACGACTTTGCCTGCGC...GGTCCATCTTCCTGGAGAAGGGCTTTGAGCGCGAGTACCGCCTGGCACCCATCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp GAGATAGTGCAGAGCGTCCCCCGAGCTGGGCAGCACCTCGAGAACTTGGTGGCAGCGCAGGCAAAGTCGTaGCGGGCCCGGGGGATGGGT +
Preference number: 4 (lower is better)
Translates to: EIVQSVPRAGQHLENLVAAQAKS*RARGMG
Trigger: ACCCATCCCCCGGGCCCGCCACGACTTTGCCTGCGC...TGCCACCAAGTTCTCGAGGTGCTGCCCAGCTCGGGGGACGCTCTGCACTATCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp ATGATGGCCACAGTGAGCAGGCTGCCGATGGTCAGGACGGCCAGGGTCAGCCTCGTCCGGCGGTGGCGCTaGGGAACGCTCACTGCTCAC +
Preference number: 4 (lower is better)
Translates to: MMATVSRLPMVRTARVSLVRRWR*GTLTAH
Trigger: GTGAGCAGTGAGCGTTCCCCAGCGCCACCGCCGGAC...GAGGCTGACCCTGGCCGTCCTGACCATCGGCAGCCTGCTCACTGTGGCCATCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp GGGCTGTGTCTCCACCCTCTCAGAGATAGTGCAGAGCGTCCCCCGAGCTGGGCATCTGGGGTCCGGCGGTaGCGCTGGGGAACGCTCACT +
Preference number: 4 (lower is better)
Translates to: GLCLHPLRDSAERPPSWASGVRR*RWGTLT
Trigger: AGTGAGCGTTCCCCAGCGCCACCGCCGGACCCCAGA...TGCCCAGCTCGGGGGACGCTCTGCACTATCTCTGAGAGGGTGGAGACACAGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000567277.6
ENST00000673973.1
CDS-3UTR GCA 90 bp TCCCCCGAGCTGGGCAGCACCTCGAGAACTTGGTGGCAAAGCACAGGCCCAGCAAGGAAGAAGGGCACCTaGTCCCACGCACAGGCCGCC +
Preference number: 4 (lower is better)
Translates to: SPELGSTSRTWWQSTGPARKKGT*SHAQAA
Trigger: GGCGGCCTGTGCGTGGGAGCAGGTGCCCTTCTTCCT...TGCTGGGCCTGTGCTTTGCCACCAAGTTCTCGAGGTGCTGCCCAGCTCGGGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR GCA 90 bp GACGAAGATCAGGCTGGCGCAGGCAAAGTCGTGGCGGGCCCGGGGGATGGGTGCCAGCGACGGTCACCATaGTCCTTGAGCCGTTCGATG +
Preference number: 4 (lower is better)
Translates to: DEDQAGAGKVVAGPGDGCQRRSP*SLSRSM
Trigger: CATCGAACGGCTCAAGGAGCATGGTGACCGTCGCTG...GCACCCATCCCCCGGGCCCGCCACGACTTTGCCTGCGCCAGCCTGATCTTCGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR GCA 90 bp GATGCAGACGAAGATCAGGCTGGCGCAGGCAAAGTCGTGGCGGGCCCGGGGGATGTGGCCTCCCGCACCTaGTTGATGGCCTGGCACATG +
Preference number: 4 (lower is better)
Translates to: DADEDQAGAGKVVAGPGDVASRT*LMAWHM
Trigger: CATGTGCCAGGCCATCAAGCAGGTGCGGGAGGCCAC...ATCCCCCGGGCCCGCCACGACTTTGCCTGCGCCAGCCTGATCTTCGTCTGCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR GCA 90 bp GATGCAGACGAAGATCAGGCTGGCGCAGGCAAAGTCGTGGCGGGCCCGGGGGATGAAGGACACACCCAGTaGCGCCGTCCTGGGCATGAG +
Preference number: 4 (lower is better)
Translates to: DADEDQAGAGKVVAGPGDEGHTQ*RRPGHE
Trigger: CTCATGCCCAGGACGGCGGCACTGGGTGTGTCCTTC...ATCCCCCGGGCCCGCCACGACTTTGCCTGCGCCAGCCTGATCTTCGTCTGCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp GAGAACTTGGTGGCAAAGCACAGGCCCAGCACCAGCCCCAGTACACAGGCCACCTGGGGAGAGGGCCTCTaGGCCTGCTGCTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: ENLVAKHRPSTSPSTQATWGEGL*ACCSMA
Trigger: GGCCATGGAGCAGCAGGCCCAGAGGCCCTCTCCCCA...GGTGGCCTGTGTACTGGGGCTGGTGCTGGGCCTGTGCTTTGCCACCAAGTTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537579.5
ENST00000673973.1
CDS-3UTR CCA 90 bp AGCAACAGAAACCTTCCTGACTTGCCAGGAGAGCCCCCGCCGGGCAGCCCTGGTGGAGGCCCCAGGGCCTaGAGGGCATCTGTCTGCCAA +
Preference number: 4 (lower is better)
Translates to: SNRNLPDLPGEPPPGSPGGGPRA*RASVCQ
Trigger: TTGGCAGACAGATGCCCTCCAGGCCCTGGGGCCTCC...ACCAGGGCTGCCCGGCGGGGGCTCTCCTGGCAAGTCAGGAAGGTTTCTGTTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp ATGATGGCCACAGTGAGCAGGCTGCCGATGGTCAGGACGGCCAGGGTCAGCCTCGGAGGCCCCAGGGCCTaGAGGGCATCTGTCTGCCAA +
Preference number: 4 (lower is better)
Translates to: MMATVSRLPMVRTARVSLGGPRA*RASVCQ
Trigger: TTGGCAGACAGATGCCCTCCAGGCCCTGGGGCCTCC...GAGGCTGACCCTGGCCGTCCTGACCATCGGCAGCCTGCTCACTGTGGCCATCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp TGCAGACGAAGATCAGGCTGGCGCAGGCAAAGTCGTGGCGGGCCCGGGGGATGGAGCAGCGGCCCATGCTaGCTGGTGAGCTGGTACTTC +
Preference number: 4 (lower is better)
Translates to: CRRRSGWRRQSRGGPGGWSSGPC*LVSWYF
Trigger: GAAGTACCAGCTCACCAGCCAGCATGGGCCGCTGCT...CCATCCCCCGGGCCCGCCACGACTTTGCCTGCGCCAGCCTGATCTTCGTCTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp CAGGTTGATGATGGCCACAGTGAGCAGGCTGCCGATGGTCAGGACGGCCAGGGTACGCAGTTCCGGGCGTaGGTAGGCAGCGACACGGGC +
Preference number: 4 (lower is better)
Translates to: QVDDGHSEQAADGQDGQGTQFRA*VGSDTG
Trigger: GCCCGTGTCGCTGCCTACCCACGCCCGGAACTGCGT...ACCCTGGCCGTCCTGACCATCGGCAGCCTGCTCACTGTGGCCATCATCAACCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp CACACCCAGTGCCGCCGTCCTGGGCATGAGCAGGACATGGACGAGCAGGATGCACTGCCTCCATCCGGTTaGCCAGGGACACGTCGTGGG +
Preference number: 4 (lower is better)
Translates to: HTQCRRPGHEQDMDEQDALPPSG*PGTRRG
Trigger: CCCACGACGTGTCCCTGGCCAACCGGATGGAGGCAG...TGCATCCTGCTCGTCCATGTCCTGCTCATGCCCAGGACGGCGGCACTGGGTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp AGAAGCCAACATGCACAGCCATCTGCATGCCTTTGGGATTGGCGTGGGGCGGAGTTGGCTGGGCGGGGGTaGCTGCTGGCTCCGGGGGTC +
Preference number: 4 (lower is better)
Translates to: RSQHAQPSACLWDWRGAELAGRG*LLAPGV
Trigger: GACCCCCGGAGCCAGCAGCCACCCCCGCCCAGCCAA...CTCCGCCCCACGCCAATCCCAAAGGCATGCAGATGGCTGTGCATGTTGGCTTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp TGCTCCCCGCCTTCTTGCTGTGACCACATTCCTCAGGACTCTATCCCCACAGCCGGCCTGGGGAGGTGTTaGCTGGGCGGGGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: CSPPSCCDHIPQDSIPTAGLGRC*LGGGGC
Trigger: GCAGCCACCCCCGCCCAGCCAACACCTCCCCAGGCC...GGCTGTGGGGATAGAGTCCTGAGGAATGTGGTCACAGCAAGAAGGCGGGGAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp GTTCCCTCCACCGCCACCCCCGCACTTAGCTGTACTCTTAATTTGCAGCCCGGGCGTCCCCCTTGGGCCTaGGGAGGTGTTGGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: VPSTATPALSCTLNLQPGRPPWA*GGVGWA
Trigger: CGCCCAGCCAACACCTCCCCAGGCCCAAGGGGGACG...CCCGGGCTGCAAATTAAGAGTACAGCTAAGTGCGGGGGTGGCGGTGGAGGGAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp CTTCTGGCCTCCCCTGCGCATTATGGCTCAGTGGCTGCTTCGAGCCAGAATCTGGGGCCGCGTCCCCCTTaGGCCTGGGGAGGTGTTGGC +
Preference number: 4 (lower is better)
Translates to: LLASPAHYGSVAASSQNLGPRPP*AWGGVG
Trigger: GCCAACACCTCCCCAGGCCCAAGGGGGACGCGGCCC...CAGATTCTGGCTCGAAGCAGCCACTGAGCCATAATGCGCAGGGGAGGCCAGAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp AGCAACAGAAACCTTCCTGACTTGCCAGGAGAGCCCCCGCCGGGCAGCCCTGGTGGACATGCTTCTGTCTaGGGTCCGGCGGTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: SNRNLPDLPGEPPPGSPGGHASV*GPAVAL
Trigger: CAGCGCCACCGCCGGACCCCAGACAGAAGCATGTCC...ACCAGGGCTGCCCGGCGGGGGCTCTCCTGGCAAGTCAGGAAGGTTTCTGTTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp CTCAGAGATAGTGCAGAGCGTCCCCCGAGCTGGGCAGCACCTCGAGAACTTGGTGCGCAGGCAAAGTCGTaGCGGGCCCGGGGGATGGGT +
Preference number: 4 (lower is better)
Translates to: LRDSAERPPSWAAPRELGAQAKS*RARGMG
Trigger: ACCCATCCCCCGGGCCCGCCACGACTTTGCCTGCGC...ACCAAGTTCTCGAGGTGCTGCCCAGCTCGGGGGACGCTCTGCACTATCTCTGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp CACCTGCCCTTCCTCGGGCTGATAAAGCCACACGACACAGCACAGGCAGACAGGGCGCAGGCAAAGTCGTaGCGGGCCCGGGGGATGGGT +
Preference number: 4 (lower is better)
Translates to: HLPFLGLIKPHDTAQADRAQAKS*RARGMG
Trigger: ACCCATCCCCCGGGCCCGCCACGACTTTGCCTGCGC...CCTGTCTGCCTGTGCTGTGTCGTGTGGCTTTATCAGCCCGAGGAAGGGCAGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp ATGCAGACGAAGATCAGGCTGGCGCAGGCAAAGTCGTGGCGGGCCCGGGGGATGGAGCGTCCCCCGAGCTaGGCAGCACCTCGAGAACTT +
Preference number: 4 (lower is better)
Translates to: MQTKIRLAQAKSWRARGMERPPS*AAPREL
Trigger: AAGTTCTCGAGGTGCTGCCCAGCTCGGGGGACGCTC...CATCCCCCGGGCCCGCCACGACTTTGCCTGCGCCAGCCTGATCTTCGTCTGCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR TCA 90 bp GAGCGTCCCCCGAGCTGGGCAGCACCTCGAGAACTTGGTGGCAAAGCACAGGCCGCATCCAGACTGGGCTaGCTCCACACGCAGTTCCTC +
Preference number: 4 (lower is better)
Translates to: ERPPSWAAPRELGGKAQAASRLG*LHTQFL
Trigger: GAGGAACTGCGTGTGGAGTCAGCCCAGTCTGGATGC...GGCCTGTGCTTTGCCACCAAGTTCTCGAGGTGCTGCCCAGCTCGGGGGACGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537579.5
ENST00000673973.1
CDS-3UTR TCA 90 bp TGGCGGGCCCGGGGGATGGGTGCCAGGCGGTACTCGCGCTCAAAGCCCTTCTCCACTTCACAGTGTAGGTaGAGAGGTCCCGGGATGCAT +
Preference number: 4 (lower is better)
Translates to: WRARGMGARRYSRSKPFSTSQCR*RGPGMH
Trigger: ATGCATCCCGGGACCTCTTCACCTACACTGTGAAGT...GGAGAAGGGCTTTGAGCGCGAGTACCGCCTGGCACCCATCCCCCGGGCCCGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR TCA 90 bp CTGGGCAGCACCTCGAGAACTTGGTGGCAAAGCACAGGCCCAGCACCAGCCCCACCTCCCGCACCTGCTTaGTGGCCTGGCACATGTCCA +
Preference number: 4 (lower is better)
Translates to: LGSTSRTWWQSTGPAPAPPPAPA*WPGTCP
Trigger: TGGACATGTGCCAGGCCATCAAGCAGGTGCGGGAGG...TGGGGCTGGTGCTGGGCCTGTGCTTTGCCACCAAGTTCTCGAGGTGCTGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR TCA 90 bp GGATGGGTGCCAGGCGGTACTCGCGCTCAAAGCCCTTCTCCAGGAAGATGGACCGGCTCCGGGGGTCGATaGCCAGGTAGGTGCGGATGT +
Preference number: 4 (lower is better)
Translates to: GWVPGGTRAQSPSPGRWTGSGGR*PGRCGC
Trigger: ACATCCGCACCTACCTGGTCATCGACCCCCGGAGCC...GGTCCATCTTCCTGGAGAAGGGCTTTGAGCGCGAGTACCGCCTGGCACCCATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000567277.6
ENST00000673973.1
CDS-3UTR TCA 90 bp TCAGCATTTGTGAGGGGGCGGGCTTCCCAGATCCAGGAGCCTCTGCATGCACCCGGCTCCGGGGGTCGATaGCCAGGTAGGTGCGGATGT +
Preference number: 4 (lower is better)
Translates to: SAFVRGRASQIQEPLHAPGSGGR*PGRCGC
Trigger: ACATCCGCACCTACCTGGTCATCGACCCCCGGAGCC...GGGTGCATGCAGAGGCTCCTGGATCTGGGAAGCCCGCCCCCTCACAAATGCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp CCCCGAGCTGGGCAGCACCTCGAGAACTTGGTGGCAAAGCACAGGCCCAGCACCCGCTCTCACGGTGGTTaGGATGTGCAAAGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: PRAGQHLENLVAKHRPSTRSHGG*DVQRAV
Trigger: CACGGCCCTTTGCACATCTCAACCACCGTGAGAGCG...GGTGCTGGGCCTGTGCTTTGCCACCAAGTTCTCGAGGTGCTGCCCAGCTCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567277.6
ENST00000673973.1
CDS-3UTR TCA 90 bp ATGCAGACGAAGATCAGGCTGGCGCAGGCAAAGTCGTGGCGGGCCCGGGGGATGCGCTCTCACGGTGGTTaGGATGTGCAAAGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: MQTKIRLAQAKSWRARGMRSHGG*DVQRAV
Trigger: CACGGCCCTTTGCACATCTCAACCACCGTGAGAGCG...CATCCCCCGGGCCCGCCACGACTTTGCCTGCGCCAGCCTGATCTTCGTCTGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000567277.6
ENST00000673973.1
CDS-3UTR TCA 90 bp AGGGCTCTTGTCTTGCTGCTCGCGGCCAGTAGGCCTGTCTCATTGCCAACAGGCGCCCTGAGGCGACGCTaGGCCCTGCAGCTGCCATGT +
Preference number: 4 (lower is better)
Translates to: RALVLLLAASRPVSLPTGALRRR*ALQLPC
Trigger: ACATGGCAGCTGCAGGGCTCAGCGTCGCCTCAGGGC...GCCTGTTGGCAATGAGACAGGCCTACTGGCCGCGAGCAGCAAGACAAGAGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673973.1
CDS-3UTR TCA 90 bp AACGGCTCAGCATTTGTGAGGGGGCGGGCTTCCCAGATCCAGGAGCCTCTGCATCTGGTTCTCGTGCCCTaGGGCGACGCTGAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: NGSAFVRGRASQIQEPLHLVLVP*GDAEPC
Trigger: GCAGGGCTCAGCGTCGCCTCAGGGCACGAGAACCAG...ATGCAGAGGCTCCTGGATCTGGGAAGCCCGCCCCCTCACAAATGCTGAGCCGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp GGGCAGCACCTCGAGAACTTGGTGGCAAAGCACAGGCCCAGCACCAGCCCCAGTGAGGGCCTCTGGGCCTaGTGCTCCATGGCCAACAAG +
Preference number: 4 (lower is better)
Translates to: GQHLENLVAKHRPSTSPSEGLWA*CSMANK
Trigger: CTTGTTGGCCATGGAGCAGCAGGCCCAGAGGCCCTC...ACTGGGGCTGGTGCTGGGCCTGTGCTTTGCCACCAAGTTCTCGAGGTGCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537579.5
ENST00000673973.1
CDS-3UTR GCA 90 bp GAAGATCAGGCTGGCGCAGGCAAAGTCGTGGCGGGCCCGGGGGATGGGTGCCAGGGCCGCCTTTGTCCATaGGTCGAACACCAGCACATA +
Preference number: 4 (lower is better)
Translates to: EDQAGAGKVVAGPGDGCQGRLCP*VEHQHI
Trigger: TATGTGCTGGTGTTCGACGCATGGACAAAGGCGGCC...CTGGCACCCATCCCCCGGGCCCGCCACGACTTTGCCTGCGCCAGCCTGATCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR GCA 90 bp GAAGATCAGGCTGGCGCAGGCAAAGTCGTGGCGGGCCCGGGGGATGGGTGCCAGGCATCCTGCATTTGGTaGTTGTGGAAGGCGCCTGTC +
Preference number: 4 (lower is better)
Translates to: EDQAGAGKVVAGPGDGCQASCIW*LWKAPV
Trigger: GACAGGCGCCTTCCACAAGCACCAAATGCAGGATGC...CTGGCACCCATCCCCCGGGCCCGCCACGACTTTGCCTGCGCCAGCCTGATCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR GCA 90 bp AGCAACAGAAACCTTCCTGACTTGCCAGGAGAGCCCCCGCCGGGCAGCCCTGGTGTGGCCTCCCGCACCTaGTTGATGGCCTGGCACATG +
Preference number: 4 (lower is better)
Translates to: SNRNLPDLPGEPPPGSPGVASRT*LMAWHM
Trigger: CATGTGCCAGGCCATCAAGCAGGTGCGGGAGGCCAC...ACCAGGGCTGCCCGGCGGGGGCTCTCCTGGCAAGTCAGGAAGGTTTCTGTTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp ATGATGGCCACAGTGAGCAGGCTGCCGATGGTCAGGACGGCCAGGGTCAGCCTCGTGGCCTCCCGCACCTaGTTGATGGCCTGGCACATG +
Preference number: 4 (lower is better)
Translates to: MMATVSRLPMVRTARVSLVASRT*LMAWHM
Trigger: CATGTGCCAGGCCATCAAGCAGGTGCGGGAGGCCAC...GAGGCTGACCCTGGCCGTCCTGACCATCGGCAGCCTGCTCACTGTGGCCATCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR GCA 90 bp GTTCCCTCCACCGCCACCCCCGCACTTAGCTGTACTCTTAATTTGCAGCCCGGGGCCGGGTACTCCGGCTaGCTCCATCCGGTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: VPSTATPALSCTLNLQPGAGYSG*LHPVGQ
Trigger: CTGGCCAACCGGATGGAGGCAGCCGGAGTACCCGGC...CCCGGGCTGCAAATTAAGAGTACAGCTAAGTGCGGGGGTGGCGGTGGAGGGAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp ATGGGTGCCAGGCGGTACTCGCGCTCAAAGCCCTTCTCCAGGAAGATGGACCCAGTGGCCTCCGTGATGTaGACCCGGCCGGGTACTCCG +
Preference number: 4 (lower is better)
Translates to: MGARRYSRSKPFSRKMDPVASVM*TRPGTP
Trigger: CGGAGTACCCGGCCGGGTGCACATCACGGAGGCCAC...TGGGTCCATCTTCCTGGAGAAGGGCTTTGAGCGCGAGTACCGCCTGGCACCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR GCA 90 bp AGGGCTCTTGTCTTGCTGCTCGCGGCCAGTAGGCCTGTCTCATTGCCAACAGGCGTGGCCTCCGTGATGTaGACCCGGCCGGGTACTCCG +
Preference number: 4 (lower is better)
Translates to: RALVLLLAASRPVSLPTGVASVM*TRPGTP
Trigger: CGGAGTACCCGGCCGGGTGCACATCACGGAGGCCAC...GCCTGTTGGCAATGAGACAGGCCTACTGGCCGCGAGCAGCAAGACAAGAGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR GCA 90 bp GAATGCCTCTGTGAGAAATGCTGTCATTGCCAGGCCCACCAGGGAGAGGGAGTCCTGGGCGGGGGTGGCTaGTGGCTCCGGGGGTCGATG +
Preference number: 4 (lower is better)
Translates to: ECLCEKCCHCQAHQGEGVLGGGG*WLRGSM
Trigger: CATCGACCCCCGGAGCCAGCAGCCACCCCCGCCCAG...GACTCCCTCTCCCTGGTGGGCCTGGCAATGACAGCATTTCTCACAGAGGCATTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp GTTTCAGAGCAAGAACGGCTCAGCATTTGTGAGGGGGCGGGCTTCCCAGATCCAGGCCCGGGGGATGGGTaGCAGGCGGTACTCGCGCTC +
Preference number: 4 (lower is better)
Translates to: VSEQERLSICEGAGFPDPGPGDG*QAVLAL
Trigger: GAGCGCGAGTACCGCCTGGCACCCATCCCCCGGGCC...TGGATCTGGGAAGCCCGCCCCCTCACAAATGCTGAGCCGTTCTTGCTCTGAAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp CAGGGGCTGTGTCTCCACCCTCTCAGAGATAGTGCAGAGCGTCCCCCGAGCTGGGAAGGACACACCCAGTaGCGCCGTCCTGGGCATGAG +
Preference number: 4 (lower is better)
Translates to: QGLCLHPLRDSAERPPSWEGHTQ*RRPGHE
Trigger: CTCATGCCCAGGACGGCGGCACTGGGTGTGTCCTTC...CCAGCTCGGGGGACGCTCTGCACTATCTCTGAGAGGGTGGAGACACAGCCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR GCA 90 bp AGCAACAGAAACCTTCCTGACTTGCCAGGAGAGCCCCCGCCGGGCAGCCCTGGTGAAGGACACACCCAGTaGCGCCGTCCTGGGCATGAG +
Preference number: 4 (lower is better)
Translates to: SNRNLPDLPGEPPPGSPGEGHTQ*RRPGHE
Trigger: CTCATGCCCAGGACGGCGGCACTGGGTGTGTCCTTC...ACCAGGGCTGCCCGGCGGGGGCTCTCCTGGCAAGTCAGGAAGGTTTCTGTTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp GGGCTCTTGTCTTGCTGCTCGCGGCCAGTAGGCCTGTCTCATTGCCAACAGGCATGGGGAGAGGGCCTCTaGGCCTGCTGCTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: GLLSCCSRPVGLSHCQQAWGEGL*ACCSMA
Trigger: GGCCATGGAGCAGCAGGCCCAGAGGCCCTCTCCCCA...TGCCTGTTGGCAATGAGACAGGCCTACTGGCCGCGAGCAGCAAGACAAGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537579.5
ENST00000673973.1
CDS-3UTR CCA 90 bp CAGGTTGATGATGGCCACAGTGAGCAGGCTGCCGATGGTCAGGACGGCCAGGGTGGAGGCCCCAGGGCCTaGAGGGCATCTGTCTGCCAA +
Preference number: 4 (lower is better)
Translates to: QVDDGHSEQAADGQDGQGGGPRA*RASVCQ
Trigger: TTGGCAGACAGATGCCCTCCAGGCCCTGGGGCCTCC...ACCCTGGCCGTCCTGACCATCGGCAGCCTGCTCACTGTGGCCATCATCAACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp GATGGCCACAGTGAGCAGGCTGCCGATGGTCAGGACGGCCAGGGTCAGCCTCAGGGAAGTAGCGCCCCTTaGCTGGCATCCTCCACCCTT +
Preference number: 4 (lower is better)
Translates to: DGHSEQAADGQDGQGQPQGSSAP*LASSTL
Trigger: AAGGGTGGAGGATGCCAGCCAAGGGGCGCTACTTCC...CTGAGGCTGACCCTGGCCGTCCTGACCATCGGCAGCCTGCTCACTGTGGCCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp GTCTTGCTGCTCGCGGCCAGTAGGCCTGTCTCATTGCCAACAGGCAGCTCTGGAGGAGGTGGGAGGCAGTaGAGACGGCCCCAACGGCGA +
Preference number: 4 (lower is better)
Translates to: VLLLAASRPVSLPTGSSGGGGRQ*RRPQRR
Trigger: TCGCCGTTGGGGCCGTCTCCACTGCCTCCCACCTCC...TCCAGAGCTGCCTGTTGGCAATGAGACAGGCCTACTGGCCGCGAGCAGCAAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp GAATGCCTCTGTGAGAAATGCTGTCATTGCCAGGCCCACCAGGGAGAGGGAGTCGGCGGGGGTGGCTGCTaGCTCCGGGGGTCGATGACC +
Preference number: 4 (lower is better)
Translates to: ECLCEKCCHCQAHQGEGVGGGGC*LRGSMT
Trigger: GGTCATCGACCCCCGGAGCCAGCAGCCACCCCCGCC...GACTCCCTCTCCCTGGTGGGCCTGGCAATGACAGCATTTCTCACAGAGGCATTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp GGGAGAGGGAGTCTCCAATCCGTGCTAGACAGCTCAGCTTACTCCCCCTTGGTGCGTCCCCCTTGGGCCTaGGGAGGTGTTGGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: GRGSLQSVLDSSAYSPLVRPPWA*GGVGWA
Trigger: CGCCCAGCCAACACCTCCCCAGGCCCAAGGGGGACG...CACCAAGGGGGAGTAAGCTGAGCTGTCTAGCACGGATTGGAGACTCCCTCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp CGAGCTGGGCAGCACCTCGAGAACTTGGTGGCAAAGCACAGGCCCAGCACCAGCCCTCCGACCGCCCCTTaGGGGACATGCTTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: RAGQHLENLVAKHRPSTSPPTAP*GTCFCL
Trigger: CAGACAGAAGCATGTCCCCCAAGGGGCGGTCGGAGG...GCTGGTGCTGGGCCTGTGCTTTGCCACCAAGTTCTCGAGGTGCTGCCCAGCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp GACGAAGATCAGGCTGGCGCAGGCAAAGTCGTGGCGGGCCCGGGGGATGGGTGCACCTCGAGAACTTGGTaGCAAAGCACAGGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: DEDQAGAGKVVAGPGDGCTSRTW*QSTGPA
Trigger: TGCTGGGCCTGTGCTTTGCCACCAAGTTCTCGAGGT...GCACCCATCCCCCGGGCCCGCCACGACTTTGCCTGCGCCAGCCTGATCTTCGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR TCA 90 bp AGCAACAGAAACCTTCCTGACTTGCCAGGAGAGCCCCCGCCGGGCAGCCCTGGTGCATCCAGACTGGGCTaGCTCCACACGCAGTTCCTC +
Preference number: 4 (lower is better)
Translates to: SNRNLPDLPGEPPPGSPGASRLG*LHTQFL
Trigger: GAGGAACTGCGTGTGGAGTCAGCCCAGTCTGGATGC...ACCAGGGCTGCCCGGCGGGGGCTCTCCTGGCAAGTCAGGAAGGTTTCTGTTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp GTCCCCCGAGCTGGGCAGCACCTCGAGAACTTGGTGGCAAAGCACAGGCCCAGCGCCCATGCTGGCTGGTaGGCTGGTACTTCTCGTAGA +
Preference number: 4 (lower is better)
Translates to: VPRAGQHLENLVAKHRPSAHAGW*AGTSRR
Trigger: TCTACGAGAAGTACCAGCTCACCAGCCAGCATGGGC...GCTGGGCCTGTGCTTTGCCACCAAGTTCTCGAGGTGCTGCCCAGCTCGGGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR TCA 90 bp AGGGGCTGTGTCTCCACCCTCTCAGAGATAGTGCAGAGCGTCCCCCGAGCTGGGCAGCGCCCCGCATGCTaGAGGGCAGTAGTGTGTACA +
Preference number: 4 (lower is better)
Translates to: RGCVSTLSEIVQSVPRAGQRPAC*RAVVCT
Trigger: TGTACACACTACTGCCCTTCAGCATGCGGGGCGCTG...CCCAGCTCGGGGGACGCTCTGCACTATCTCTGAGAGGGTGGAGACACAGCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR TCA 90 bp CGAGCTGGGCAGCACCTCGAGAACTTGGTGGCAAAGCACAGGCCCAGCACCAGCCAGCGCCCCGCATGCTaGAGGGCAGTAGTGTGTACA +
Preference number: 4 (lower is better)
Translates to: RAGQHLENLVAKHRPSTSQRPAC*RAVVCT
Trigger: TGTACACACTACTGCCCTTCAGCATGCGGGGCGCTG...GCTGGTGCTGGGCCTGTGCTTTGCCACCAAGTTCTCGAGGTGCTGCCCAGCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR TCA 90 bp CCCCGAGCTGGGCAGCACCTCGAGAACTTGGTGGCAAAGCACAGGCCCAGCACCTCCCACACAGGAAGATaGCTGCGTTGGCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: PRAGQHLENLVAKHRPSTSHTGR*LRWPAA
Trigger: AGCTGCTGGCCAACGCAGTCATCTTCCTGTGTGGGA...GGTGCTGGGCCTGTGCTTTGCCACCAAGTTCTCGAGGTGCTGCCCAGCTCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR TCA 90 bp AGGTTGATGATGGCCACAGTGAGCAGGCTGCCGATGGTCAGGACGGCCAGGGTCACTTGCGCAGCCCGATaGCCCCGCACAGCACATTCC +
Preference number: 4 (lower is better)
Translates to: RLMMATVSRLPMVRTARVTCAAR*PRTAHS
Trigger: GGAATGTGCTGTGCGGGGTCATCGGGCTGCGCAAGT...GACCCTGGCCGTCCTGACCATCGGCAGCCTGCTCACTGTGGCCATCATCAACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR TCA 90 bp AACGGCTCAGCATTTGTGAGGGGGCGGGCTTCCCAGATCCAGGAGCCTCTGCATTTAGCGTGGCCTCCGTaGTGTGCACCCGGCCGGGTA +
Preference number: 4 (lower is better)
Translates to: NGSAFVRGRASQIQEPLHLAWPP*CAPGRV
Trigger: TACCCGGCCGGGTGCACATCACGGAGGCCACGCTAA...ATGCAGAGGCTCCTGGATCTGGGAAGCCCGCCCCCTCACAAATGCTGAGCCGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp ATGCAGACGAAGATCAGGCTGGCGCAGGCAAAGTCGTGGCGGGCCCGGGGGATGGGATGTTCATCTCCTTaGGGTAGGGGTCCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: MQTKIRLAQAKSWRARGMGCSSP*GRGPAA
Trigger: AGCAGCGGGACCCCTACCTCAAGGAGATGAACATCC...CATCCCCCGGGCCCGCCACGACTTTGCCTGCGCCAGCCTGATCTTCGTCTGCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000567277.6
ENST00000673973.1
CDS-3UTR TCA 90 bp AAAGGTGTAGAAGTCATCGGACTTGGAGCAGCAGGGCCTCGTGGAGCTGAGCCCCCGGGTCATGCGCACTaGCGCCCGCATCTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: KGVEVIGLGAAGPRGAEPPGHAH*RPHLQG
Trigger: GCCCTGAAGATGCGGGCGTCAGTGCGCATGACCCGG...GGGCTCAGCTCCACGAGGCCCTGCTGCTCCAAGTCCGATGACTTCTACACCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000567277.6
ENST00000673973.1
CDS-3UTR TCA 90 bp GGATGGGTGCCAGGCGGTACTCGCGCTCAAAGCCCTTCTCCAGGAAGATGGACCAGGGCCTCGTGGAGCTaGGCCCCTCAATGGCTGACA +
Preference number: 4 (lower is better)
Translates to: GWVPGGTRAQSPSPGRWTRASWS*APQWLT
Trigger: TGTCAGCCATTGAGGGGCTCAGCTCCACGAGGCCCT...GGTCCATCTTCCTGGAGAAGGGCTTTGAGCGCGAGTACCGCCTGGCACCCATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567277.6
ENST00000673973.1
CDS-3UTR TCA 90 bp AACGGCTCAGCATTTGTGAGGGGGCGGGCTTCCCAGATCCAGGAGCCTCTGCATCCGCCGTCCTGGGCATaGGCAGGACATGGACGAGCA +
Preference number: 4 (lower is better)
Translates to: NGSAFVRGRASQIQEPLHPPSWA*AGHGRA
Trigger: TGCTCGTCCATGTCCTGCTCATGCCCAGGACGGCGG...ATGCAGAGGCTCCTGGATCTGGGAAGCCCGCCCCCTCACAAATGCTGAGCCGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp ATAGTGCAGAGCGTCCCCCGAGCTGGGCAGCACCTCGAGAACTTGGTGGCAAAGCCGCCGTCCTGGGCATaGGCAGGACATGGACGAGCA +
Preference number: 4 (lower is better)
Translates to: IVQSVPRAGQHLENLVAKPPSWA*AGHGRA
Trigger: TGCTCGTCCATGTCCTGCTCATGCCCAGGACGGCGG...CTTTGCCACCAAGTTCTCGAGGTGCTGCCCAGCTCGGGGGACGCTCTGCACTAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR TCA 90 bp GCTCTTGTCTTGCTGCTCGCGGCCAGTAGGCCTGTCTCATTGCCAACAGGCAGCCCGCCGTCCTGGGCATaGGCAGGACATGGACGAGCA +
Preference number: 4 (lower is better)
Translates to: ALVLLLAASRPVSLPTGSPPSWA*AGHGRA
Trigger: TGCTCGTCCATGTCCTGCTCATGCCCAGGACGGCGG...GCTGCCTGTTGGCAATGAGACAGGCCTACTGGCCGCGAGCAGCAAGACAAGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR TCA 90 bp GGGAGAGGGAGTCTCCAATCCGTGCTAGACAGCTCAGCTTACTCCCCCTTGGTGCTGGTTCTCGTGCCCTaGGGCGACGCTGAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: GRGSLQSVLDSSAYSPLVLVLVP*GDAEPC
Trigger: GCAGGGCTCAGCGTCGCCTCAGGGCACGAGAACCAG...CACCAAGGGGGAGTAAGCTGAGCTGTCTAGCACGGATTGGAGACTCCCTCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp GATGGCCACAGTGAGCAGGCTGCCGATGGTCAGGACGGCCAGGGTCAGCCTCAGGCCAGCATCCTCCTGTaGATCCAGACTGGGCTGACT +
Preference number: 4 (lower is better)
Translates to: DGHSEQAADGQDGQGQPQASILL*IQTGLT
Trigger: AGTCAGCCCAGTCTGGATGCACAGGAGGATGCTGGC...CTGAGGCTGACCCTGGCCGTCCTGACCATCGGCAGCCTGCTCACTGTGGCCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537579.5
ENST00000673973.1
CDS-3UTR GCA 90 bp AGAACTTGGTGGCAAAGCACAGGCCCAGCACCAGCCCCAGTACACAGGCCACCAGGCCTCTGGGCCTGCTaGTCCATGGCCAACAAGGGG +
Preference number: 4 (lower is better)
Translates to: RTWWQSTGPAPAPVHRPPGLWAC*SMANKG
Trigger: CCCCTTGTTGGCCATGGAGCAGCAGGCCCAGAGGCC...TGGTGGCCTGTGTACTGGGGCTGGTGCTGGGCCTGTGCTTTGCCACCAAGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537579.5
ENST00000673973.1
CDS-3UTR GCA 90 bp CTCAGAGATAGTGCAGAGCGTCCCCCGAGCTGGGCAGCACCTCGAGAACTTGGTGGCCTCTGGGCCTGCTaGTCCATGGCCAACAAGGGG +
Preference number: 4 (lower is better)
Translates to: LRDSAERPPSWAAPRELGGLWAC*SMANKG
Trigger: CCCCTTGTTGGCCATGGAGCAGCAGGCCCAGAGGCC...ACCAAGTTCTCGAGGTGCTGCCCAGCTCGGGGGACGCTCTGCACTATCTCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537579.5
ENST00000673973.1
CDS-3UTR GCA 90 bp CAGGGGCTGTGTCTCCACCCTCTCAGAGATAGTGCAGAGCGTCCCCCGAGCTGGGCACCAGGAACGCCATaGCCAGAATGGCCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: QGLCLHPLRDSAERPPSWAPGTP*PEWPGV
Trigger: GACACCAGGCCATTCTGGGCATGGCGTTCCTGGTGC...CCAGCTCGGGGGACGCTCTGCACTATCTCTGAGAGGGTGGAGACACAGCCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR GCA 90 bp GATAGTGCAGAGCGTCCCCCGAGCTGGGCAGCACCTCGAGAACTTGGTGGCAAAAGGAAGAAGGGCACCTaGTCCCACGCACAGGCCGCC +
Preference number: 4 (lower is better)
Translates to: DSAERPPSWAAPRELGGKRKKGT*SHAQAA
Trigger: GGCGGCCTGTGCGTGGGAGCAGGTGCCCTTCTTCCT...TTTGCCACCAAGTTCTCGAGGTGCTGCCCAGCTCGGGGGACGCTCTGCACTATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR GCA 90 bp GGGCTCTTGTCTTGCTGCTCGCGGCCAGTAGGCCTGTCTCATTGCCAACAGGCAAGGAAGAAGGGCACCTaGTCCCACGCACAGGCCGCC +
Preference number: 4 (lower is better)
Translates to: GLLSCCSRPVGLSHCQQARKKGT*SHAQAA
Trigger: GGCGGCCTGTGCGTGGGAGCAGGTGCCCTTCTTCCT...TGCCTGTTGGCAATGAGACAGGCCTACTGGCCGCGAGCAGCAAGACAAGAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR GCA 90 bp GACGAAGATCAGGCTGGCGCAGGCAAAGTCGTGGCGGGCCCGGGGGATGGGTGCTCCCGGGATGCATCCTaGATTTGGTGCTTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: DEDQAGAGKVVAGPGDGCSRDAS*IWCLWK
Trigger: CTTCCACAAGCACCAAATGCAGGATGCATCCCGGGA...GCACCCATCCCCCGGGCCCGCCACGACTTTGCCTGCGCCAGCCTGATCTTCGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR GCA 90 bp AGCAGGGGCTGTGTCTCCACCCTCTCAGAGATAGTGCAGAGCGTCCCCCGAGCTGCTGGCGCTTCTCGATaGGCAGCTTCCGGCGGATCT +
Preference number: 4 (lower is better)
Translates to: SRGCVSTLSEIVQSVPRAAGASR*AASGGS
Trigger: AGATCCGCCGGAAGCTGCGCATCGAGAAGCGCCAGC...AGCTCGGGGGACGCTCTGCACTATCTCTGAGAGGGTGGAGACACAGCCCCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR GCA 90 bp CGAGCAGGATGCAGACGAAGATCAGGCTGGCGCAGGCAAAGTCGTGGCGGGCCCCAGCGACGGTCACCATaGTCCTTGAGCCGTTCGATG +
Preference number: 4 (lower is better)
Translates to: RAGCRRRSGWRRQSRGGPQRRSP*SLSRSM
Trigger: CATCGAACGGCTCAAGGAGCATGGTGACCGTCGCTG...GGGCCCGCCACGACTTTGCCTGCGCCAGCCTGATCTTCGTCTGCATCCTGCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR GCA 90 bp AAAGGTGTAGAAGTCATCGGACTTGGAGCAGCAGGGCCTCGTGGAGCTGAGCCCGCCGGGTACTCCGGCTaGCTCCATCCGGTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: KGVEVIGLGAAGPRGAEPAGYSG*LHPVGQ
Trigger: CTGGCCAACCGGATGGAGGCAGCCGGAGTACCCGGC...GGGCTCAGCTCCACGAGGCCCTGCTGCTCCAAGTCCGATGACTTCTACACCTTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567277.6
ENST00000673973.1
CDS-3UTR GCA 90 bp AGAATACACCTGCCCTTCCTCGGGCTGATAAAGCCACACGACACAGCACAGGCACTGGGCGGGGGTGGCTaGTGGCTCCGGGGGTCGATG +
Preference number: 4 (lower is better)
Translates to: RIHLPFLGLIKPHDTAQALGGGG*WLRGSM
Trigger: CATCGACCCCCGGAGCCAGCAGCCACCCCCGCCCAG...TGCCTGTGCTGTGTCGTGTGGCTTTATCAGCCCGAGGAAGGGCAGGTGTATTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp TTAATTTGCAGCCCGGGGCAACTCATCCCAGGACCCCAACAAGTCTGGTCAGTCGGCCCGGGGGATGGGTaGCAGGCGGTACTCGCGCTC +
Preference number: 4 (lower is better)
Translates to: LICSPGQLIPGPQQVWSVGPGDG*QAVLAL
Trigger: GAGCGCGAGTACCGCCTGGCACCCATCCCCCGGGCC...GACTGACCAGACTTGTTGGGGTCCTGGGATGAGTTGCCCCGGGCTGCAAATTAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp GACGAAGATCAGGCTGGCGCAGGCAAAGTCGTGGCGGGCCCGGGGGATGGGTGCGTAGGCCTGTCTCATTaGCAACAGGCAGCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: DEDQAGAGKVVAGPGDGCVGLSH*QQAALE
Trigger: TTCCAGAGCTGCCTGTTGGCAATGAGACAGGCCTAC...GCACCCATCCCCCGGGCCCGCCACGACTTTGCCTGCGCCAGCCTGATCTTCGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR GCA 90 bp TCCCCCGAGCTGGGCAGCACCTCGAGAACTTGGTGGCAAAGCACAGGCCCAGCAACAGGGCTCTTGTCTTaGTGCTCGCGGCCAGTAGGC +
Preference number: 4 (lower is better)
Translates to: SPELGSTSRTWWQSTGPATGLLS*CSRPVG
Trigger: GCCTACTGGCCGCGAGCAGCAAGACAAGAGCCCTGT...TGCTGGGCCTGTGCTTTGCCACCAAGTTCTCGAGGTGCTGCCCAGCTCGGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR GCA 90 bp AGCAACAGAAACCTTCCTGACTTGCCAGGAGAGCCCCCGCCGGGCAGCCCTGGTGACCTCACTTGTGCGTaGCCACAGGCCACTGAGGTG +
Preference number: 4 (lower is better)
Translates to: SNRNLPDLPGEPPPGSPGDLTCA*PQATEV
Trigger: CACCTCAGTGGCCTGTGGGCACGCACAAGTGAGGTC...ACCAGGGCTGCCCGGCGGGGGCTCTCCTGGCAAGTCAGGAAGGTTTCTGTTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp GGGCTGTGTCTCCACCCTCTCAGAGATAGTGCAGAGCGTCCCCCGAGCTGGGCACTGGGGAACGCTCACTaGTCACGCTCTCACGGTGGT +
Preference number: 4 (lower is better)
Translates to: GLCLHPLRDSAERPPSWALGNAH*SRSHGG
Trigger: ACCACCGTGAGAGCGTGAGCAGTGAGCGTTCCCCAG...TGCCCAGCTCGGGGGACGCTCTGCACTATCTCTGAGAGGGTGGAGACACAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp GGGGATGGGTGCCAGGCGGTACTCGCGCTCAAAGCCCTTCTCCAGGAAGATGGAGGGTCCGCACAGCTCTaGCACCAGGCCTCACTCACT +
Preference number: 4 (lower is better)
Translates to: GDGCQAVLALKALLQEDGGSAQL*HQASLT
Trigger: AGTGAGTGAGGCCTGGTGCCAGAGCTGTGCGGACCC...TCCATCTTCCTGGAGAAGGGCTTTGAGCGCGAGTACCGCCTGGCACCCATCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537579.5
ENST00000673973.1
CDS-3UTR CCA 90 bp TGCTCCCCGCCTTCTTGCTGTGACCACATTCCTCAGGACTCTATCCCCACAGCCTGGGGAGAGGGCCTCTaGGCCTGCTGCTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: CSPPSCCDHIPQDSIPTAWGEGL*ACCSMA
Trigger: GGCCATGGAGCAGCAGGCCCAGAGGCCCTCTCCCCA...GGCTGTGGGGATAGAGTCCTGAGGAATGTGGTCACAGCAAGAAGGCGGGGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp GGGCAGCACCTCGAGAACTTGGTGGCAAAGCACAGGCCCAGCACCAGCCCCAGTGGAAGTAGCGCCCCTTaGCTGGCATCCTCCACCCTT +
Preference number: 4 (lower is better)
Translates to: GQHLENLVAKHRPSTSPSGSSAP*LASSTL
Trigger: AAGGGTGGAGGATGCCAGCCAAGGGGCGCTACTTCC...ACTGGGGCTGGTGCTGGGCCTGTGCTTTGCCACCAAGTTCTCGAGGTGCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp AGCAACAGAAACCTTCCTGACTTGCCAGGAGAGCCCCCGCCGGGCAGCCCTGGTGGAAGTAGCGCCCCTTaGCTGGCATCCTCCACCCTT +
Preference number: 4 (lower is better)
Translates to: SNRNLPDLPGEPPPGSPGGSSAP*LASSTL
Trigger: AAGGGTGGAGGATGCCAGCCAAGGGGCGCTACTTCC...ACCAGGGCTGCCCGGCGGGGGCTCTCCTGGCAAGTCAGGAAGGTTTCTGTTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp AGGGGCTGTGTCTCCACCCTCTCAGAGATAGTGCAGAGCGTCCCCCGAGCTGGGACGCCATGCCCAGAATaGCCTGGTGTCTGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: RGCVSTLSEIVQSVPRAGTPCPE*PGVWRG
Trigger: ACCCCTCCAGACACCAGGCCATTCTGGGCATGGCGT...CCCAGCTCGGGGGACGCTCTGCACTATCTCTGAGAGGGTGGAGACACAGCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp GAGCTGGGCAGCACCTCGAGAACTTGGTGGCAAAGCACAGGCCCAGCACCAGCCACGCCATGCCCAGAATaGCCTGGTGTCTGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: ELGSTSRTWWQSTGPAPATPCPE*PGVWRG
Trigger: ACCCCTCCAGACACCAGGCCATTCTGGGCATGGCGT...GGCTGGTGCTGGGCCTGTGCTTTGCCACCAAGTTCTCGAGGTGCTGCCCAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp GATGGCCACAGTGAGCAGGCTGCCGATGGTCAGGACGGCCAGGGTCAGCCTCAGCCAGCTTCATGCCCATaGAGATGTGGGCCGGAAGCA +
Preference number: 4 (lower is better)
Translates to: DGHSEQAADGQDGQGQPQPASCP*RCGPEA
Trigger: TGCTTCCGGCCCACATCTCCATGGGCATGAAGCTGG...CTGAGGCTGACCCTGGCCGTCCTGACCATCGGCAGCCTGCTCACTGTGGCCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp AGAACTTGGTGGCAAAGCACAGGCCCAGCACCAGCCCCAGTACACAGGCCACCACTGCCTCCATCCGGTTaGCCAGGGACACGTCGTGGG +
Preference number: 4 (lower is better)
Translates to: RTWWQSTGPAPAPVHRPPLPPSG*PGTRRG
Trigger: CCCACGACGTGTCCCTGGCCAACCGGATGGAGGCAG...TGGTGGCCTGTGTACTGGGGCTGGTGCTGGGCCTGTGCTTTGCCACCAAGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp TTAATTTGCAGCCCGGGGCAACTCATCCCAGGACCCCAACAAGTCTGGTCAGTCGGCGGGGGTGGCTGCTaGCTCCGGGGGTCGATGACC +
Preference number: 4 (lower is better)
Translates to: LICSPGQLIPGPQQVWSVGGGGC*LRGSMT
Trigger: GGTCATCGACCCCCGGAGCCAGCAGCCACCCCCGCC...GACTGACCAGACTTGTTGGGGTCCTGGGATGAGTTGCCCCGGGCTGCAAATTAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp TTAATTTGCAGCCCGGGGCAACTCATCCCAGGACCCCAACAAGTCTGGTCAGTCTTGGCTGGGCGGGGGTaGCTGCTGGCTCCGGGGGTC +
Preference number: 4 (lower is better)
Translates to: LICSPGQLIPGPQQVWSVLAGRG*LLAPGV
Trigger: GACCCCCGGAGCCAGCAGCCACCCCCGCCCAGCCAA...GACTGACCAGACTTGTTGGGGTCCTGGGATGAGTTGCCCCGGGCTGCAAATTAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp AGAATACACCTGCCCTTCCTCGGGCTGATAAAGCCACACGACACAGCACAGGCAGGGCCGCGTCCCCCTTaGGCCTGGGGAGGTGTTGGC +
Preference number: 4 (lower is better)
Translates to: RIHLPFLGLIKPHDTAQAGPRPP*AWGGVG
Trigger: GCCAACACCTCCCCAGGCCCAAGGGGGACGCGGCCC...TGCCTGTGCTGTGTCGTGTGGCTTTATCAGCCCGAGGAAGGGCAGGTGTATTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp AACGGCTCAGCATTTGTGAGGGGGCGGGCTTCCCAGATCCAGGAGCCTCTGCATTCTGGGGTCCGGCGGTaGCGCTGGGGAACGCTCTTA +
Preference number: 4 (lower is better)
Translates to: NGSAFVRGRASQIQEPLHSGVRR*RWGTLL
Trigger: TAAGAGCGTTCCCCAGCGCCACCGCCGGACCCCAGA...ATGCAGAGGCTCCTGGATCTGGGAAGCCCGCCCCCTCACAAATGCTGAGCCGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
CDS-3UTR CCA 90 bp CCCCGAGCTGGGCAGCACCTCGAGAACTTGGTGGCAAAGCACAGGCCCAGCACCAGAAGTCATCGGACTTaGAGCAGCAGGGCCTCGTGG +
Preference number: 4 (lower is better)
Translates to: PRAGQHLENLVAKHRPSTRSHRT*SSRASW
Trigger: CCACGAGGCCCTGCTGCTCCAAGTCCGATGACTTCT...GGTGCTGGGCCTGTGCTTTGCCACCAAGTTCTCGAGGTGCTGCCCAGCTCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp GTCCCCCGAGCTGGGCAGCACCTCGAGAACTTGGTGGCAAAGCACAGGCCCAGCAGAAGTCATCGGACTTaGAGCAGCAGGGCCTCGTGG +
Preference number: 4 (lower is better)
Translates to: VPRAGQHLENLVAKHRPSRSHRT*SSRASW
Trigger: CCACGAGGCCCTGCTGCTCCAAGTCCGATGACTTCT...GCTGGGCCTGTGCTTTGCCACCAAGTTCTCGAGGTGCTGCCCAGCTCGGGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp TGCAGACGAAGATCAGGCTGGCGCAGGCAAAGTCGTGGCGGGCCCGGGGGATGGACCTCGAGAACTTGGTaGCAAAGCACAGGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: CRRRSGWRRQSRGGPGGWTSRTW*QSTGPA
Trigger: TGCTGGGCCTGTGCTTTGCCACCAAGTTCTCGAGGT...CCATCCCCCGGGCCCGCCACGACTTTGCCTGCGCCAGCCTGATCTTCGTCTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp GATGGGTGCCAGGCGGTACTCGCGCTCAAAGCCCTTCTCCAGGAAGATGGACCCGAGCGTCCCCCGAGCTaGGCAGCACCTCGAGAACTT +
Preference number: 4 (lower is better)
Translates to: DGCQAVLALKALLQEDGPERPPS*AAPREL
Trigger: AAGTTCTCGAGGTGCTGCCCAGCTCGGGGGACGCTC...GGGTCCATCTTCCTGGAGAAGGGCTTTGAGCGCGAGTACCGCCTGGCACCCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp GTCTTGCTGCTCGCGGCCAGTAGGCCTGTCTCATTGCCAACAGGCAGCTCTGGATGCCGCTCCAGCTCCTaGTTCTCGTGCCCTGAGGCG +
Preference number: 4 (lower is better)
Translates to: VLLLAASRPVSLPTGSSGCRSSS*FSCPEA
Trigger: CGCCTCAGGGCACGAGAACCAGGAGCTGGAGCGGCA...TCCAGAGCTGCCTGTTGGCAATGAGACAGGCCTACTGGCCGCGAGCAGCAAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673973.1
CDS-3UTR CCA 90 bp GTCCCCCGAGCTGGGCAGCACCTCGAGAACTTGGTGGCAAAGCACAGGCCCAGCGCATGCCTTTGGGATTaGCGTGGGGCGGAGAGTCTT +
Preference number: 4 (lower is better)
Translates to: VPRAGQHLENLVAKHRPSACLWD*RGAESL
Trigger: AAGACTCTCCGCCCCACGCCAATCCCAAAGGCATGC...GCTGGGCCTGTGCTTTGCCACCAAGTTCTCGAGGTGCTGCCCAGCTCGGGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673973.1
CDS-3UTR CCA 90 bp GTCCCCCGAGCTGGGCAGCACCTCGAGAACTTGGTGGCAAAGCACAGGCCCAGCCTCCCCTGCGCATTATaGCTCAGTGGCTGCTTCGAG +
Preference number: 4 (lower is better)
Translates to: VPRAGQHLENLVAKHRPSLPCAL*LSGCFE
Trigger: CTCGAAGCAGCCACTGAGCCATAATGCGCAGGGGAG...GCTGGGCCTGTGCTTTGCCACCAAGTTCTCGAGGTGCTGCCCAGCTCGGGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673973.1
CDS-3UTR CCA 90 bp GGGAGAGGGAGTCTCCAATCCGTGCTAGACAGCTCAGCTTACTCCCCCTTGGTGTCTGGGGTCCGGCGGTaGCGCTGGGGAACGCTCACT +
Preference number: 4 (lower is better)
Translates to: GRGSLQSVLDSSAYSPLVSGVRR*RWGTLT
Trigger: AGTGAGCGTTCCCCAGCGCCACCGCCGGACCCCAGA...CACCAAGGGGGAGTAAGCTGAGCTGTCTAGCACGGATTGGAGACTCCCTCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000673973.1
CDS-3UTR TCA 90 bp ATGCAGACGAAGATCAGGCTGGCGCAGGCAAAGTCGTGGCGGGCCCGGGGGATGGGACACTGGGTGTCGTaGAGCCTCCCATCAAAGAAC +
Preference number: 4 (lower is better)
Translates to: MQTKIRLAQAKSWRARGMGHWVS*SLPSKN
Trigger: GTTCTTTGATGGGAGGCTTCACGACACCCAGTGTCC...CATCCCCCGGGCCCGCCACGACTTTGCCTGCGCCAGCCTGATCTTCGTCTGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR TCA 90 bp ATAGTGCAGAGCGTCCCCCGAGCTGGGCAGCACCTCGAGAACTTGGTGGCAAAGGTGGGCCGGAAGCACTaGCAGCAGCAGGTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: IVQSVPRAGQHLENLVAKVGRKH*QQQVLL
Trigger: CAGGAGAACCTGCTGCTGTCAGTGCTTCCGGCCCAC...CTTTGCCACCAAGTTCTCGAGGTGCTGCCCAGCTCGGGGGACGCTCTGCACTAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR TCA 90 bp ATGGGTGCCAGGCGGTACTCGCGCTCAAAGCCCTTCTCCAGGAAGATGGACCCAGTGGGCCGGAAGCACTaGCAGCAGCAGGTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: MGARRYSRSKPFSRKMDPVGRKH*QQQVLL
Trigger: CAGGAGAACCTGCTGCTGTCAGTGCTTCCGGCCCAC...TGGGTCCATCTTCCTGGAGAAGGGCTTTGAGCGCGAGTACCGCCTGGCACCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR TCA 90 bp AACGGCTCAGCATTTGTGAGGGGGCGGGCTTCCCAGATCCAGGAGCCTCTGCATGTGGGCCGGAAGCACTaGCAGCAGCAGGTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: NGSAFVRGRASQIQEPLHVGRKH*QQQVLL
Trigger: CAGGAGAACCTGCTGCTGTCAGTGCTTCCGGCCCAC...ATGCAGAGGCTCCTGGATCTGGGAAGCCCGCCCCCTCACAAATGCTGAGCCGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp GGCTCACACAGGGCTCTTGTCTTGCTGCTCGCGGCCAGTAGGCCTGTCTCATTGCCTCCCGCACCTGCTTaGTGGCCTGGCACATGTCCA +
Preference number: 4 (lower is better)
Translates to: GSHRALVLLLAASRPVSLPPAPA*WPGTCP
Trigger: TGGACATGTGCCAGGCCATCAAGCAGGTGCGGGAGG...CAATGAGACAGGCCTACTGGCCGCGAGCAGCAAGACAAGAGCCCTGTGTGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR TCA 90 bp GGGCTCTTGTCTTGCTGCTCGCGGCCAGTAGGCCTGTCTCATTGCCAACAGGCAACTTGCGCAGCCCGATaGCCCCGCACAGCACATTCC +
Preference number: 4 (lower is better)
Translates to: GLLSCCSRPVGLSHCQQATCAAR*PRTAHS
Trigger: GGAATGTGCTGTGCGGGGTCATCGGGCTGCGCAAGT...TGCCTGTTGGCAATGAGACAGGCCTACTGGCCGCGAGCAGCAAGACAAGAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR TCA 90 bp ACAGGGCTCTTGTCTTGCTGCTCGCGGCCAGTAGGCCTGTCTCATTGCCAACAGTTAGCGTGGCCTCCGTaGTGTGCACCCGGCCGGGTA +
Preference number: 4 (lower is better)
Translates to: TGLLSCCSRPVGLSHCQQLAWPP*CAPGRV
Trigger: TACCCGGCCGGGTGCACATCACGGAGGCCACGCTAA...CTGTTGGCAATGAGACAGGCCTACTGGCCGCGAGCAGCAAGACAAGAGCCCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR TCA 90 bp GGACCCAAAGGTGTAGAAGTCATCGGACTTGGAGCAGCAGGGCCTCGTGGAGCTTTAGCGTGGCCTCCGTaGTGTGCACCCGGCCGGGTA +
Preference number: 4 (lower is better)
Translates to: GPKGVEVIGLGAAGPRGALAWPP*CAPGRV
Trigger: TACCCGGCCGGGTGCACATCACGGAGGCCACGCTAA...AGCTCCACGAGGCCCTGCTGCTCCAAGTCCGATGACTTCTACACCTTTGGGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567277.6
ENST00000673973.1
CDS-3UTR TCA 90 bp AGAAGCCAACATGCACAGCCATCTGCATGCCTTTGGGATTGGCGTGGGGCGGAGGGCTCCGGGGGTCGATaGCCAGGTAGGTGCGGATGT +
Preference number: 4 (lower is better)
Translates to: RSQHAQPSACLWDWRGAEGSGGR*PGRCGC
Trigger: ACATCCGCACCTACCTGGTCATCGACCCCCGGAGCC...CTCCGCCCCACGCCAATCCCAAAGGCATGCAGATGGCTGTGCATGTTGGCTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp GATGCAGACGAAGATCAGGCTGGCGCAGGCAAAGTCGTGGCGGGCCCGGGGGATGAGCCCCTCAATGGCTaGCAGCATCTCGTCATCGTA +
Preference number: 4 (lower is better)
Translates to: DADEDQAGAGKVVAGPGDEPLNG*QHLVIV
Trigger: TACGATGACGAGATGCTGTCAGCCATTGAGGGGCTC...ATCCCCCGGGCCCGCCACGACTTTGCCTGCGCCAGCCTGATCTTCGTCTGCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000567277.6
ENST00000673973.1
CDS-3UTR TCA 90 bp ACAGGGCTCTTGTCTTGCTGCTCGCGGCCAGTAGGCCTGTCTCATTGCCAACAGCCGCCGTCCTGGGCATaGGCAGGACATGGACGAGCA +
Preference number: 4 (lower is better)
Translates to: TGLLSCCSRPVGLSHCQQPPSWA*AGHGRA
Trigger: TGCTCGTCCATGTCCTGCTCATGCCCAGGACGGCGG...CTGTTGGCAATGAGACAGGCCTACTGGCCGCGAGCAGCAAGACAAGAGCCCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR TCA 90 bp TGCTCCCCGCCTTCTTGCTGTGACCACATTCCTCAGGACTCTATCCCCACAGCCCCGCCGTCCTGGGCATaGGCAGGACATGGACGAGCA +
Preference number: 4 (lower is better)
Translates to: CSPPSCCDHIPQDSIPTAPPSWA*AGHGRA
Trigger: TGCTCGTCCATGTCCTGCTCATGCCCAGGACGGCGG...GGCTGTGGGGATAGAGTCCTGAGGAATGTGGTCACAGCAAGAAGGCGGGGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp TCCCCCGAGCTGGGCAGCACCTCGAGAACTTGGTGGCAAAGCACAGGCCCAGCACCCGCCTTCTTGCTGTaGCCACATTCCTCAGGACTC +
Preference number: 4 (lower is better)
Translates to: SPELGSTSRTWWQSTGPAPAFLL*PHSSGL
Trigger: GAGTCCTGAGGAATGTGGTCACAGCAAGAAGGCGGG...TGCTGGGCCTGTGCTTTGCCACCAAGTTCTCGAGGTGCTGCCCAGCTCGGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673973.1
CDS-3UTR TCA 90 bp CTGGGCAGCACCTCGAGAACTTGGTGGCAAAGCACAGGCCCAGCACCAGCCCCACAACAGAAACCTTCCTaGCTTGCCAGGAGAGCCCCC +
Preference number: 4 (lower is better)
Translates to: LGSTSRTWWQSTGPAPAPQQKPS*LARRAP
Trigger: GGGGGCTCTCCTGGCAAGTCAGGAAGGTTTCTGTTG...TGGGGCTGGTGCTGGGCCTGTGCTTTGCCACCAAGTTCTCGAGGTGCTGCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673973.1
CDS-3UTR GCA 90 bp GCAGCACCTCGAGAACTTGGTGGCAAAGCACAGGCCCAGCACCAGCCCCAGTACAGGCCTCACTCACTGTaGCGCCAGCATCCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: AAPRELGGKAQAQHQPQYRPHSL*RQHPPV
Trigger: CACAGGAGGATGCTGGCGGCACAGTGAGTGAGGCCT...GTACTGGGGCTGGTGCTGGGCCTGTGCTTTGCCACCAAGTTCTCGAGGTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537579.5
ENST00000673973.1
CDS-3UTR GCA 90 bp GGGAGAGGGAGTCTCCAATCCGTGCTAGACAGCTCAGCTTACTCCCCCTTGGTGGGCCTCTGGGCCTGCTaGTCCATGGCCAACAAGGGG +
Preference number: 4 (lower is better)
Translates to: GRGSLQSVLDSSAYSPLVGLWAC*SMANKG
Trigger: CCCCTTGTTGGCCATGGAGCAGCAGGCCCAGAGGCC...CACCAAGGGGGAGTAAGCTGAGCTGTCTAGCACGGATTGGAGACTCCCTCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp GTTCCCTCCACCGCCACCCCCGCACTTAGCTGTACTCTTAATTTGCAGCCCGGGGAGGGCCTCTGGGCCTaGTGCTCCATGGCCAACAAG +
Preference number: 4 (lower is better)
Translates to: VPSTATPALSCTLNLQPGEGLWA*CSMANK
Trigger: CTTGTTGGCCATGGAGCAGCAGGCCCAGAGGCCCTC...CCCGGGCTGCAAATTAAGAGTACAGCTAAGTGCGGGGGTGGCGGTGGAGGGAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp AGGGCTCTTGTCTTGCTGCTCGCGGCCAGTAGGCCTGTCTCATTGCCAACAGGCGAGGGCCTCTGGGCCTaGTGCTCCATGGCCAACAAG +
Preference number: 4 (lower is better)
Translates to: RALVLLLAASRPVSLPTGEGLWA*CSMANK
Trigger: CTTGTTGGCCATGGAGCAGCAGGCCCAGAGGCCCTC...GCCTGTTGGCAATGAGACAGGCCTACTGGCCGCGAGCAGCAAGACAAGAGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537579.5
ENST00000673973.1
CDS-3UTR GCA 90 bp GAGCGTCCCCCGAGCTGGGCAGCACCTCGAGAACTTGGTGGCAAAGCACAGGCCGGCCGCCTTTGTCCATaGGTCGAACACCAGCACATA +
Preference number: 4 (lower is better)
Translates to: ERPPSWAAPRELGGKAQAGRLCP*VEHQHI
Trigger: TATGTGCTGGTGTTCGACGCATGGACAAAGGCGGCC...GGCCTGTGCTTTGCCACCAAGTTCTCGAGGTGCTGCCCAGCTCGGGGGACGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR GCA 90 bp CGAGCAGGATGCAGACGAAGATCAGGCTGGCGCAGGCAAAGTCGTGGCGGGCCCGCATCCTGCATTTGGTaGTTGTGGAAGGCGCCTGTC +
Preference number: 4 (lower is better)
Translates to: RAGCRRRSGWRRQSRGGPASCIW*LWKAPV
Trigger: GACAGGCGCCTTCCACAAGCACCAAATGCAGGATGC...GGGCCCGCCACGACTTTGCCTGCGCCAGCCTGATCTTCGTCTGCATCCTGCTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR GCA 90 bp ATAGTGCAGAGCGTCCCCCGAGCTGGGCAGCACCTCGAGAACTTGGTGGCAAAGGCTGGCGCTTCTCGATaGGCAGCTTCCGGCGGATCT +
Preference number: 4 (lower is better)
Translates to: IVQSVPRAGQHLENLVAKAGASR*AASGGS
Trigger: AGATCCGCCGGAAGCTGCGCATCGAGAAGCGCCAGC...CTTTGCCACCAAGTTCTCGAGGTGCTGCCCAGCTCGGGGGACGCTCTGCACTAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR GCA 90 bp CAACATGCACAGCCATCTGCATGCCTTTGGGATTGGCGTGGGGCGGAGAGTCTTGCCGGGTACTCCGGCTaGCTCCATCCGGTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: QHAQPSACLWDWRGAESLAGYSG*LHPVGQ
Trigger: CTGGCCAACCGGATGGAGGCAGCCGGAGTACCCGGC...AAGACTCTCCGCCCCACGCCAATCCCAAAGGCATGCAGATGGCTGTGCATGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp CTCAGAGATAGTGCAGAGCGTCCCCCGAGCTGGGCAGCACCTCGAGAACTTGGTACGGTGGTTGAGATGTaGAAAGGGCCGTGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: LRDSAERPPSWAAPRELGTVVEM*KGPCRP
Trigger: GGGGCGGCACGGCCCTTTGCACATCTCAACCACCGT...ACCAAGTTCTCGAGGTGCTGCCCAGCTCGGGGGACGCTCTGCACTATCTCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000567277.6
ENST00000673973.1
CDS-3UTR GCA 90 bp ACTCATCCCAGGACCCCAACAAGTCTGGTCAGTCACCCAATCTGCAACCCTGTAGGCCCGGGGGATGGGTaGCAGGCGGTACTCGCGCTC +
Preference number: 4 (lower is better)
Translates to: THPRTPTSLVSHPICNPVGPGDG*QAVLAL
Trigger: GAGCGCGAGTACCGCCTGGCACCCATCCCCCGGGCC...TACAGGGTTGCAGATTGGGTGACTGACCAGACTTGTTGGGGTCCTGGGATGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp GATGGCCACAGTGAGCAGGCTGCCGATGGTCAGGACGGCCAGGGTCAGCCTCAGCATGGACGAGCAGGATaGAGACGAAGATCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: DGHSEQAADGQDGQGQPQHGRAG*RRRSGW
Trigger: CCAGCCTGATCTTCGTCTGCATCCTGCTCGTCCATG...CTGAGGCTGACCCTGGCCGTCCTGACCATCGGCAGCCTGCTCACTGTGGCCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR GCA 90 bp CTCAGAGATAGTGCAGAGCGTCCCCCGAGCTGGGCAGCACCTCGAGAACTTGGTGGGCTCTTGTCTTGCTaGTCGCGGCCAGTAGGCCTG +
Preference number: 4 (lower is better)
Translates to: LRDSAERPPSWAAPRELGGLLSC*SRPVGL
Trigger: CAGGCCTACTGGCCGCGAGCAGCAAGACAAGAGCCC...ACCAAGTTCTCGAGGTGCTGCCCAGCTCGGGGGACGCTCTGCACTATCTCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR GCA 90 bp GGCTCACACAGGGCTCTTGTCTTGCTGCTCGCGGCCAGTAGGCCTGTCTCATTGGGGCTCTTGTCTTGCTaGTCGCGGCCAGTAGGCCTG +
Preference number: 4 (lower is better)
Translates to: GSHRALVLLLAASRPVSLGLLSC*SRPVGL
Trigger: CAGGCCTACTGGCCGCGAGCAGCAAGACAAGAGCCC...CAATGAGACAGGCCTACTGGCCGCGAGCAGCAAGACAAGAGCCCTGTGTGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR GCA 90 bp GAGCTGGGCAGCACCTCGAGAACTTGGTGGCAAAGCACAGGCCCAGCACCAGCCTCAAAGGCAAGGCTCTaGTGCTCCCCGCCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: ELGSTSRTWWQSTGPAPASKARL*CSPPSC
Trigger: GCAAGAAGGCGGGGAGCAGCAGAGCCTTGCCTTTGA...GGCTGGTGCTGGGCCTGTGCTTTGCCACCAAGTTCTCGAGGTGCTGCCCAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673973.1
CDS-3UTR GCA 90 bp GAGATAGTGCAGAGCGTCCCCCGAGCTGGGCAGCACCTCGAGAACTTGGTGGCAAGGGCCTTGTCCAGGTaGTTTAGCGTGGCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: EIVQSVPRAGQHLENLVARALSR*FSVASV
Trigger: CACGGAGGCCACGCTAAAGCACCTGGACAAGGCCCT...TGCCACCAAGTTCTCGAGGTGCTGCCCAGCTCGGGGGACGCTCTGCACTATCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537579.5
CDS-3UTR CCA 90 bp TCCCCCGAGCTGGGCAGCACCTCGAGAACTTGGTGGCAAAGCACAGGCCCAGCACCTGTGCATCCAGACTaGGCTGACTCCACACGCAGT +
Preference number: 4 (lower is better)
Translates to: SPELGSTSRTWWQSTGPAPVHPD*ADSTRS
Trigger: ACTGCGTGTGGAGTCAGCCCAGTCTGGATGCACAGG...TGCTGGGCCTGTGCTTTGCCACCAAGTTCTCGAGGTGCTGCCCAGCTCGGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537579.5
ENST00000673973.1
CDS-3UTR CCA 90 bp GATAGTGCAGAGCGTCCCCCGAGCTGGGCAGCACCTCGAGAACTTGGTGGCAAAGGGTCCGCACAGCTCTaGCACCAGGCCTCACTCACT +
Preference number: 4 (lower is better)
Translates to: DSAERPPSWAAPRELGGKGSAQL*HQASLT
Trigger: AGTGAGTGAGGCCTGGTGCCAGAGCTGTGCGGACCC...TTTGCCACCAAGTTCTCGAGGTGCTGCCCAGCTCGGGGGACGCTCTGCACTATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537579.5
ENST00000673973.1
CDS-3UTR CCA 90 bp CTTCTGGCCTCCCCTGCGCATTATGGCTCAGTGGCTGCTTCGAGCCAGAATCTGGGAGGCCCCAGGGCCTaGAGGGCATCTGTCTGCCAA +
Preference number: 4 (lower is better)
Translates to: LLASPAHYGSVAASSQNLGGPRA*RASVCQ
Trigger: TTGGCAGACAGATGCCCTCCAGGCCCTGGGGCCTCC...CAGATTCTGGCTCGAAGCAGCCACTGAGCCATAATGCGCAGGGGAGGCCAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp AAAGGTGTAGAAGTCATCGGACTTGGAGCAGCAGGGCCTCGTGGAGCTGAGCCCGGAGGCCCCAGGGCCTaGAGGGCATCTGTCTGCCAA +
Preference number: 4 (lower is better)
Translates to: KGVEVIGLGAAGPRGAEPGGPRA*RASVCQ
Trigger: TTGGCAGACAGATGCCCTCCAGGCCCTGGGGCCTCC...GGGCTCAGCTCCACGAGGCCCTGCTGCTCCAAGTCCGATGACTTCTACACCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp ATGATGGCCACAGTGAGCAGGCTGCCGATGGTCAGGACGGCCAGGGTCAGCCTCCTGGAGGGGTCCCCCTaGCTGAAGGCAATGATGATG +
Preference number: 4 (lower is better)
Translates to: MMATVSRLPMVRTARVSLLEGSP*LKAMMM
Trigger: CATCATCATTGCCTTCAGCCAGGGGGACCCCTCCAG...GAGGCTGACCCTGGCCGTCCTGACCATCGGCAGCCTGCTCACTGTGGCCATCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp GATGGGTGCCAGGCGGTACTCGCGCTCAAAGCCCTTCTCCAGGAAGATGGACCCAGCAGGTTCTCCTGCTaGCGCTTCTCGATGCGCAGC +
Preference number: 4 (lower is better)
Translates to: DGCQAVLALKALLQEDGPSRFSC*RFSMRS
Trigger: GCTGCGCATCGAGAAGCGCCAGCAGGAGAACCTGCT...GGGTCCATCTTCCTGGAGAAGGGCTTTGAGCGCGAGTACCGCCTGGCACCCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp GATGGCCACAGTGAGCAGGCTGCCGATGGTCAGGACGGCCAGGGTCAGCCTCAGTGCACTCGTTGGCCTTaGCGATCTGGTCGAACTTGC +
Preference number: 4 (lower is better)
Translates to: DGHSEQAADGQDGQGQPQCTRWP*RSGRTC
Trigger: GCAAGTTCGACCAGATCGCCAAGGCCAACGAGTGCA...CTGAGGCTGACCCTGGCCGTCCTGACCATCGGCAGCCTGCTCACTGTGGCCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp AGAATACACCTGCCCTTCCTCGGGCTGATAAAGCCACACGACACAGCACAGGCATGGGGAGGTGTTGGCTaGGCGGGGGTGGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: RIHLPFLGLIKPHDTAQAWGGVG*AGVAAG
Trigger: GCCAGCAGCCACCCCCGCCCAGCCAACACCTCCCCA...TGCCTGTGCTGTGTCGTGTGGCTTTATCAGCCCGAGGAAGGGCAGGTGTATTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp ACTCATCCCAGGACCCCAACAAGTCTGGTCAGTCACCCAATCTGCAACCCTGTAGGCCTGGGGAGGTGTTaGCTGGGCGGGGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: THPRTPTSLVSHPICNPVGLGRC*LGGGGC
Trigger: GCAGCCACCCCCGCCCAGCCAACACCTCCCCAGGCC...TACAGGGTTGCAGATTGGGTGACTGACCAGACTTGTTGGGGTCCTGGGATGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp TCTAGAAAAACAGACCTCACTTGTGCGTGCCCACAGGCCACTGAGGTGGAAGTCGGCCTGGGGAGGTGTTaGCTGGGCGGGGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: SRKTDLTCACPQATEVEVGLGRC*LGGGGC
Trigger: GCAGCCACCCCCGCCCAGCCAACACCTCCCCAGGCC...GACTTCCACCTCAGTGGCCTGTGGGCACGCACAAGTGAGGTCTGTTTTTCTAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp ATGCAGACGAAGATCAGGCTGGCGCAGGCAAAGTCGTGGCGGGCCCGGGGGATGCTCACGCTCTCACGGTaGTTGAGATGTGCAAAGGGC +
Preference number: 4 (lower is better)
Translates to: MQTKIRLAQAKSWRARGMLTLSR*LRCAKG
Trigger: GCCCTTTGCACATCTCAACCACCGTGAGAGCGTGAG...CATCCCCCGGGCCCGCCACGACTTTGCCTGCGCCAGCCTGATCTTCGTCTGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp GAATGCCTCTGTGAGAAATGCTGTCATTGCCAGGCCCACCAGGGAGAGGGAGTCGTCCGGCGGTGGCGCTaGGGAACGCTCTTAGGCCTC +
Preference number: 4 (lower is better)
Translates to: ECLCEKCCHCQAHQGEGVVRRWR*GTLLGL
Trigger: GAGGCCTAAGAGCGTTCCCCAGCGCCACCGCCGGAC...GACTCCCTCTCCCTGGTGGGCCTGGCAATGACAGCATTTCTCACAGAGGCATTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
CDS-3UTR CCA 90 bp TGCTCCCCGCCTTCTTGCTGTGACCACATTCCTCAGGACTCTATCCCCACAGCCGGACATGCTTCTGTCTaGGGTCCGGCGGTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: CSPPSCCDHIPQDSIPTAGHASV*GPAVAL
Trigger: CAGCGCCACCGCCGGACCCCAGACAGAAGCATGTCC...GGCTGTGGGGATAGAGTCCTGAGGAATGTGGTCACAGCAAGAAGGCGGGGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp GTTCCCTCCACCGCCACCCCCGCACTTAGCTGTACTCTTAATTTGCAGCCCGGGCCTCCGACCGCCCCTTaGGGGACATGCTTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: VPSTATPALSCTLNLQPGPPTAP*GTCFCL
Trigger: CAGACAGAAGCATGTCCCCCAAGGGGCGGTCGGAGG...CCCGGGCTGCAAATTAAGAGTACAGCTAAGTGCGGGGGTGGCGGTGGAGGGAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp GGGCAGCACCTCGAGAACTTGGTGGCAAAGCACAGGCCCAGCACCAGCCCCAGTGGCAGCTCTGGAACTTaGAAAGGCATCAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GQHLENLVAKHRPSTSPSGSSGT*KGIRGR
Trigger: CCTGCCCCTGATGCCTTTCCAAGTTCCAGAGCTGCC...ACTGGGGCTGGTGCTGGGCCTGTGCTTTGCCACCAAGTTCTCGAGGTGCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp CACACCCAGTGCCGCCGTCCTGGGCATGAGCAGGACATGGACGAGCAGGATGCAGGCAGCTCTGGAACTTaGAAAGGCATCAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: HTQCRRPGHEQDMDEQDAGSSGT*KGIRGR
Trigger: CCTGCCCCTGATGCCTTTCCAAGTTCCAGAGCTGCC...TGCATCCTGCTCGTCCATGTCCTGCTCATGCCCAGGACGGCGGCACTGGGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp TGCAGACGAAGATCAGGCTGGCGCAGGCAAAGTCGTGGCGGGCCCGGGGGATGGGCCAACAGGCAGCTCTaGAACTTGGAAAGGCATCAG +
Preference number: 4 (lower is better)
Translates to: CRRRSGWRRQSRGGPGGWANRQL*NLERHQ
Trigger: CTGATGCCTTTCCAAGTTCCAGAGCTGCCTGTTGGC...CCATCCCCCGGGCCCGCCACGACTTTGCCTGCGCCAGCCTGATCTTCGTCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp GTTCCCTCCACCGCCACCCCCGCACTTAGCTGTACTCTTAATTTGCAGCCCGGGGAGTACCCGAGGCCCTaGAGGATGGTGCAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: VPSTATPALSCTLNLQPGEYPRP*RMVQVS
Trigger: GGAGACCTGCACCATCCTCCAGGGCCTCGGGTACTC...CCCGGGCTGCAAATTAAGAGTACAGCTAAGTGCGGGGGTGGCGGTGGAGGGAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp CGAGCTGGGCAGCACCTCGAGAACTTGGTGGCAAAGCACAGGCCCAGCACCAGCCAGGCACAGAGCTTCTaGCCTCCCCTGCGCATTATG +
Preference number: 4 (lower is better)
Translates to: RAGQHLENLVAKHRPSTSQAQSF*PPLRIM
Trigger: CATAATGCGCAGGGGAGGCCAGAAGCTCTGTGCCTG...GCTGGTGCTGGGCCTGTGCTTTGCCACCAAGTTCTCGAGGTGCTGCCCAGCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673973.1
3UTR CAA 72 bp CAGTATGCAGGTGCGGGAGGGGCTCACACAGGGCTCTaGTCTTGCTGCTCGCGGCCAGTAGGCCTGTCTCAT +
Preference number: 4 (lower is better)
Translates to: QYAGAGGAHTGL*SCCSRPVGLSH
Trigger: ATGAGACAGGCCTACTGGCCGCGAGCAGCAAGACAAGAGCCCTGTGTGAGCCCCTCCCGCACCTGCATACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537579.5
ENST00000567277.6
CDS-3UTR TCA 90 bp GTTCCCTCCACCGCCACCCCCGCACTTAGCTGTACTCTTAATTTGCAGCCCGGGCAGCGCCCCGCATGCTaGAGGGCAGTAGTGTGTACA +
Preference number: 4 (lower is better)
Translates to: VPSTATPALSCTLNLQPGQRPAC*RAVVCT
Trigger: TGTACACACTACTGCCCTTCAGCATGCGGGGCGCTG...CCCGGGCTGCAAATTAAGAGTACAGCTAAGTGCGGGGGTGGCGGTGGAGGGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp CGAGCTGGGCAGCACCTCGAGAACTTGGTGGCAAAGCACAGGCCCAGCACCAGCGGACACTGGGTGTCGTaGAGCCTCCCATCAAAGAAC +
Preference number: 4 (lower is better)
Translates to: RAGQHLENLVAKHRPSTSGHWVS*SLPSKN
Trigger: GTTCTTTGATGGGAGGCTTCACGACACCCAGTGTCC...GCTGGTGCTGGGCCTGTGCTTTGCCACCAAGTTCTCGAGGTGCTGCCCAGCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR TCA 90 bp GGGAGAGGGAGTCTCCAATCCGTGCTAGACAGCTCAGCTTACTCCCCCTTGGTGGTGGGCCGGAAGCACTaGCAGCAGCAGGTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: GRGSLQSVLDSSAYSPLVVGRKH*QQQVLL
Trigger: CAGGAGAACCTGCTGCTGTCAGTGCTTCCGGCCCAC...CACCAAGGGGGAGTAAGCTGAGCTGTCTAGCACGGATTGGAGACTCCCTCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp TGCTCCCCGCCTTCTTGCTGTGACCACATTCCTCAGGACTCTATCCCCACAGCCGTGGGCCGGAAGCACTaGCAGCAGCAGGTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: CSPPSCCDHIPQDSIPTAVGRKH*QQQVLL
Trigger: CAGGAGAACCTGCTGCTGTCAGTGCTTCCGGCCCAC...GGCTGTGGGGATAGAGTCCTGAGGAATGTGGTCACAGCAAGAAGGCGGGGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp GGGCTGTGTCTCCACCCTCTCAGAGATAGTGCAGAGCGTCCCCCGAGCTGGGCAAGTCGCCGAGGATCTTaGTTCGCATGCACTCGTTGG +
Preference number: 4 (lower is better)
Translates to: GLCLHPLRDSAERPPSWASRRGS*FACTRW
Trigger: CCAACGAGTGCATGCGAATCAAGATCCTCGGCGACT...TGCCCAGCTCGGGGGACGCTCTGCACTATCTCTGAGAGGGTGGAGACACAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR TCA 90 bp TGCTCCCCGCCTTCTTGCTGTGACCACATTCCTCAGGACTCTATCCCCACAGCCACTTGCGCAGCCCGATaGCCCCGCACAGCACATTCC +
Preference number: 4 (lower is better)
Translates to: CSPPSCCDHIPQDSIPTATCAAR*PRTAHS
Trigger: GGAATGTGCTGTGCGGGGTCATCGGGCTGCGCAAGT...GGCTGTGGGGATAGAGTCCTGAGGAATGTGGTCACAGCAAGAAGGCGGGGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp CTTCTGGCCTCCCCTGCGCATTATGGCTCAGTGGCTGCTTCGAGCCAGAATCTGACTTGCGCAGCCCGATaGCCCCGCACAGCACATTCC +
Preference number: 4 (lower is better)
Translates to: LLASPAHYGSVAASSQNLTCAAR*PRTAHS
Trigger: GGAATGTGCTGTGCGGGGTCATCGGGCTGCGCAAGT...CAGATTCTGGCTCGAAGCAGCCACTGAGCCATAATGCGCAGGGGAGGCCAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp TCAGCATTTGTGAGGGGGCGGGCTTCCCAGATCCAGGAGCCTCTGCATGCACCCGGATGTTCATCTCCTTaGGGTAGGGGTCCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: SAFVRGRASQIQEPLHAPGCSSP*GRGPAA
Trigger: AGCAGCGGGACCCCTACCTCAAGGAGATGAACATCC...GGGTGCATGCAGAGGCTCCTGGATCTGGGAAGCCCGCCCCCTCACAAATGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp AGAATACACCTGCCCTTCCTCGGGCTGATAAAGCCACACGACACAGCACAGGCACCGGGTCATGCGCACTaGCGCCCGCATCTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: RIHLPFLGLIKPHDTAQAPGHAH*RPHLQG
Trigger: GCCCTGAAGATGCGGGCGTCAGTGCGCATGACCCGG...TGCCTGTGCTGTGTCGTGTGGCTTTATCAGCCCGAGGAAGGGCAGGTGTATTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp GTTCCCTCCACCGCCACCCCCGCACTTAGCTGTACTCTTAATTTGCAGCCCGGGCGCTCTCACGGTGGTTaGGATGTGCAAAGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: VPSTATPALSCTLNLQPGRSHGG*DVQRAV
Trigger: CACGGCCCTTTGCACATCTCAACCACCGTGAGAGCG...CCCGGGCTGCAAATTAAGAGTACAGCTAAGTGCGGGGGTGGCGGTGGAGGGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp CACACCCAGTGCCGCCGTCCTGGGCATGAGCAGGACATGGACGAGCAGGATGCAGAGCCCCTCAATGGCTaGCAGCATCTCGTCATCGTA +
Preference number: 4 (lower is better)
Translates to: HTQCRRPGHEQDMDEQDAEPLNG*QHLVIV
Trigger: TACGATGACGAGATGCTGTCAGCCATTGAGGGGCTC...TGCATCCTGCTCGTCCATGTCCTGCTCATGCCCAGGACGGCGGCACTGGGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567277.6
ENST00000673973.1
CDS-3UTR TCA 90 bp CCCCGAGCTGGGCAGCACCTCGAGAACTTGGTGGCAAAGCACAGGCCCAGCACCTCTGGTGCATGTGTCTaGGAAATCCTCCAGTGCAGG +
Preference number: 4 (lower is better)
Translates to: PRAGQHLENLVAKHRPSTSGACV*EILQCR
Trigger: CCTGCACTGGAGGATTTCTCAGACACATGCACCAGA...GGTGCTGGGCCTGTGCTTTGCCACCAAGTTCTCGAGGTGCTGCCCAGCTCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673973.1
CDS-3UTR GCA 90 bp GCTCTTGTCTTGCTGCTCGCGGCCAGTAGGCCTGTCTCATTGCCAACAGGCAGCGCACCAGGAACGCCATaGCCAGAATGGCCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: ALVLLLAASRPVSLPTGSAPGTP*PEWPGV
Trigger: GACACCAGGCCATTCTGGGCATGGCGTTCCTGGTGC...GCTGCCTGTTGGCAATGAGACAGGCCTACTGGCCGCGAGCAGCAAGACAAGAGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR GCA 90 bp GATGCAGACGAAGATCAGGCTGGCGCAGGCAAAGTCGTGGCGGGCCCGGGGGATTCCCGGGATGCATCCTaGATTTGGTGCTTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: DADEDQAGAGKVVAGPGDSRDAS*IWCLWK
Trigger: CTTCCACAAGCACCAAATGCAGGATGCATCCCGGGA...ATCCCCCGGGCCCGCCACGACTTTGCCTGCGCCAGCCTGATCTTCGTCTGCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR GCA 90 bp CGAGCAGGATGCAGACGAAGATCAGGCTGGCGCAGGCAAAGTCGTGGCGGGCCCAGTTGTTGTCAGGCATaGAGCGACGGTCACCATGCT +
Preference number: 4 (lower is better)
Translates to: RAGCRRRSGWRRQSRGGPSCCQA*SDGHHA
Trigger: AGCATGGTGACCGTCGCTGCATGCCTGACAACAACT...GGGCCCGCCACGACTTTGCCTGCGCCAGCCTGATCTTCGTCTGCATCCTGCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR GCA 90 bp GATGCAGACGAAGATCAGGCTGGCGCAGGCAAAGTCGTGGCGGGCCCGGGGGATAGTTGTTGTCAGGCATaGAGCGACGGTCACCATGCT +
Preference number: 4 (lower is better)
Translates to: DADEDQAGAGKVVAGPGDSCCQA*SDGHHA
Trigger: AGCATGGTGACCGTCGCTGCATGCCTGACAACAACT...ATCCCCCGGGCCCGCCACGACTTTGCCTGCGCCAGCCTGATCTTCGTCTGCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR GCA 90 bp AGGACATGGACGAGCAGGATGCAGACGAAGATCAGGCTGGCGCAGGCAAAGTCGCGAGGTACCGGGTCATaGGCACTGACGCCCGCATCT +
Preference number: 4 (lower is better)
Translates to: RTWTSRMQTKIRLAQAKSRGTGS*ALTPAS
Trigger: AGATGCGGGCGTCAGTGCGCATGACCCGGTACCTCG...CGACTTTGCCTGCGCCAGCCTGATCTTCGTCTGCATCCTGCTCGTCCATGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567277.6
ENST00000673973.1
CDS-3UTR GCA 90 bp CTGGGCAGCACCTCGAGAACTTGGTGGCAAAGCACAGGCCCAGCACCAGCCCCACATGGACGAGCAGGATaGAGACGAAGATCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: LGSTSRTWWQSTGPAPAPHGRAG*RRRSGW
Trigger: CCAGCCTGATCTTCGTCTGCATCCTGCTCGTCCATG...TGGGGCTGGTGCTGGGCCTGTGCTTTGCCACCAAGTTCTCGAGGTGCTGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR GCA 90 bp GGACATGGACGAGCAGGATGCAGACGAAGATCAGGCTGGCGCAGGCAAAGTCGTGAAGGACACACCCAGTaGCGCCGTCCTGGGCATGAG +
Preference number: 4 (lower is better)
Translates to: GHGRAGCRRRSGWRRQSREGHTQ*RRPGHE
Trigger: CTCATGCCCAGGACGGCGGCACTGGGTGTGTCCTTC...ACGACTTTGCCTGCGCCAGCCTGATCTTCGTCTGCATCCTGCTCGTCCATGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR GCA 90 bp GATGGCCACAGTGAGCAGGCTGCCGATGGTCAGGACGGCCAGGGTCAGCCTCAGGTAGGCCTGTCTCATTaGCAACAGGCAGCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: DGHSEQAADGQDGQGQPQVGLSH*QQAALE
Trigger: TTCCAGAGCTGCCTGTTGGCAATGAGACAGGCCTAC...CTGAGGCTGACCCTGGCCGTCCTGACCATCGGCAGCCTGCTCACTGTGGCCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR GCA 90 bp TGCTCCCCGCCTTCTTGCTGTGACCACATTCCTCAGGACTCTATCCCCACAGCCGGGCTCTTGTCTTGCTaGTCGCGGCCAGTAGGCCTG +
Preference number: 4 (lower is better)
Translates to: CSPPSCCDHIPQDSIPTAGLLSC*SRPVGL
Trigger: CAGGCCTACTGGCCGCGAGCAGCAAGACAAGAGCCC...GGCTGTGGGGATAGAGTCCTGAGGAATGTGGTCACAGCAAGAAGGCGGGGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp GGGAGAGGGAGTCTCCAATCCGTGCTAGACAGCTCAGCTTACTCCCCCTTGGTGGGGCTCTTGTCTTGCTaGTCGCGGCCAGTAGGCCTG +
Preference number: 4 (lower is better)
Translates to: GRGSLQSVLDSSAYSPLVGLLSC*SRPVGL
Trigger: CAGGCCTACTGGCCGCGAGCAGCAAGACAAGAGCCC...CACCAAGGGGGAGTAAGCTGAGCTGTCTAGCACGGATTGGAGACTCCCTCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp CACCTGCCCTTCCTCGGGCTGATAAAGCCACACGACACAGCACAGGCAGACAGGACAGGGCTCTTGTCTTaGTGCTCGCGGCCAGTAGGC +
Preference number: 4 (lower is better)
Translates to: HLPFLGLIKPHDTAQADRTGLLS*CSRPVG
Trigger: GCCTACTGGCCGCGAGCAGCAAGACAAGAGCCCTGT...CCTGTCTGCCTGTGCTGTGTCGTGTGGCTTTATCAGCCCGAGGAAGGGCAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp GTTCCCTCCACCGCCACCCCCGCACTTAGCTGTACTCTTAATTTGCAGCCCGGGGCTGAGCCCTGCAGCTaGCATGTACGTGCTGCCGAT +
Preference number: 4 (lower is better)
Translates to: VPSTATPALSCTLNLQPGAEPCS*HVRAAD
Trigger: ATCGGCAGCACGTACATGGCAGCTGCAGGGCTCAGC...CCCGGGCTGCAAATTAAGAGTACAGCTAAGTGCGGGGGTGGCGGTGGAGGGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp GGACCCAAAGGTGTAGAAGTCATCGGACTTGGAGCAGCAGGGCCTCGTGGAGCTGGCGACGCTGAGCCCTaGAGCTGCCATGTACGTGCT +
Preference number: 4 (lower is better)
Translates to: GPKGVEVIGLGAAGPRGAGDAEP*SCHVRA
Trigger: AGCACGTACATGGCAGCTGCAGGGCTCAGCGTCGCC...AGCTCCACGAGGCCCTGCTGCTCCAAGTCCGATGACTTCTACACCTTTGGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673973.1
CDS-3UTR GCA 90 bp CTTCTGGCCTCCCCTGCGCATTATGGCTCAGTGGCTGCTTCGAGCCAGAATCTGAGCTCCTGGTTCTCGTaGCCTGAGGCGACGCTGAGC +
Preference number: 4 (lower is better)
Translates to: LLASPAHYGSVAASSQNLSSWFS*PEATLS
Trigger: GCTCAGCGTCGCCTCAGGGCACGAGAACCAGGAGCT...CAGATTCTGGCTCGAAGCAGCCACTGAGCCATAATGCGCAGGGGAGGCCAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp GGACATGGACGAGCAGGATGCAGACGAAGATCAGGCTGGCGCAGGCAAAGTCGTAGCTCCTGGTTCTCGTaGCCTGAGGCGACGCTGAGC +
Preference number: 4 (lower is better)
Translates to: GHGRAGCRRRSGWRRQSRSSWFS*PEATLS
Trigger: GCTCAGCGTCGCCTCAGGGCACGAGAACCAGGAGCT...ACGACTTTGCCTGCGCCAGCCTGATCTTCGTCTGCATCCTGCTCGTCCATGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673973.1
CDS-3UTR GCA 90 bp GTTCCCTCCACCGCCACCCCCGCACTTAGCTGTACTCTTAATTTGCAGCCCGGGACACCAATGTGGGCATaGTGCCGCTCCAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: VPSTATPALSCTLNLQPGTPMWA*CRSSSW
Trigger: CCAGGAGCTGGAGCGGCAGCATGCCCACATTGGTGT...CCCGGGCTGCAAATTAAGAGTACAGCTAAGTGCGGGGGTGGCGGTGGAGGGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp ATGATGGCCACAGTGAGCAGGCTGCCGATGGTCAGGACGGCCAGGGTCAGCCTCTGCTCCCCGCCTTCTTaGTGTGACCACATTCCTCAG +
Preference number: 4 (lower is better)
Translates to: MMATVSRLPMVRTARVSLCSPPS*CDHIPQ
Trigger: CTGAGGAATGTGGTCACAGCAAGAAGGCGGGGAGCA...GAGGCTGACCCTGGCCGTCCTGACCATCGGCAGCCTGCTCACTGTGGCCATCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673973.1
CDS-3UTR GCA 90 bp CAGGTTGATGATGGCCACAGTGAGCAGGCTGCCGATGGTCAGGACGGCCAGGGTAAGGCAAGGCTCTGCTaGTCCCCGCCTTCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: QVDDGHSEQAADGQDGQGKARLC*SPPSCC
Trigger: ACAGCAAGAAGGCGGGGAGCAGCAGAGCCTTGCCTT...ACCCTGGCCGTCCTGACCATCGGCAGCCTGCTCACTGTGGCCATCATCAACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673973.1
CDS-3UTR CCA 90 bp ACTCATCCCAGGACCCCAACAAGTCTGGTCAGTCACCCAATCTGCAACCCTGTAGCAGGCAAGCAGGGCTaGGGAGAGGGCCTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: THPRTPTSLVSHPICNPVAGKQG*GEGLWA
Trigger: GGCCCAGAGGCCCTCTCCCCAGCCCTGCTTGCCTGC...TACAGGGTTGCAGATTGGGTGACTGACCAGACTTGTTGGGGTCCTGGGATGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp AACGGCTCAGCATTTGTGAGGGGGCGGGCTTCCCAGATCCAGGAGCCTCTGCATGGAAGTAGCGCCCCTTaGCTGGCATCCTCCACCCTT +
Preference number: 4 (lower is better)
Translates to: NGSAFVRGRASQIQEPLHGSSAP*LASSTL
Trigger: AAGGGTGGAGGATGCCAGCCAAGGGGCGCTACTTCC...ATGCAGAGGCTCCTGGATCTGGGAAGCCCGCCCCCTCACAAATGCTGAGCCGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp GTTCCCTCCACCGCCACCCCCGCACTTAGCTGTACTCTTAATTTGCAGCCCGGGGGAAGTAGCGCCCCTTaGCTGGCATCCTCCACCCTT +
Preference number: 4 (lower is better)
Translates to: VPSTATPALSCTLNLQPGGSSAP*LASSTL
Trigger: AAGGGTGGAGGATGCCAGCCAAGGGGCGCTACTTCC...CCCGGGCTGCAAATTAAGAGTACAGCTAAGTGCGGGGGTGGCGGTGGAGGGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp CTCAGAGATAGTGCAGAGCGTCCCCCGAGCTGGGCAGCACCTCGAGAACTTGGTAGCAGCGGCCCATGCTaGCTGGTGAGCTGGTACTTC +
Preference number: 4 (lower is better)
Translates to: LRDSAERPPSWAAPRELGSSGPC*LVSWYF
Trigger: GAAGTACCAGCTCACCAGCCAGCATGGGCCGCTGCT...ACCAAGTTCTCGAGGTGCTGCCCAGCTCGGGGGACGCTCTGCACTATCTCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp AGGTTGATGATGGCCACAGTGAGCAGGCTGCCGATGGTCAGGACGGCCAGGGTCCTGGAGGGGTCCCCCTaGCTGAAGGCAATGATGATG +
Preference number: 4 (lower is better)
Translates to: RLMMATVSRLPMVRTARVLEGSP*LKAMMM
Trigger: CATCATCATTGCCTTCAGCCAGGGGGACCCCTCCAG...GACCCTGGCCGTCCTGACCATCGGCAGCCTGCTCACTGTGGCCATCATCAACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp GATAGTGCAGAGCGTCCCCCGAGCTGGGCAGCACCTCGAGAACTTGGTGGCAAAACGCCATGCCCAGAATaGCCTGGTGTCTGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: DSAERPPSWAAPRELGGKTPCPE*PGVWRG
Trigger: ACCCCTCCAGACACCAGGCCATTCTGGGCATGGCGT...TTTGCCACCAAGTTCTCGAGGTGCTGCCCAGCTCGGGGGACGCTCTGCACTATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp TTAATTTGCAGCCCGGGGCAACTCATCCCAGGACCCCAACAAGTCTGGTCAGTCGGAGGTGGGAGGCAGTaGAGACGGCCCCAACGGCGA +
Preference number: 4 (lower is better)
Translates to: LICSPGQLIPGPQQVWSVGGGRQ*RRPQRR
Trigger: TCGCCGTTGGGGCCGTCTCCACTGCCTCCCACCTCC...GACTGACCAGACTTGTTGGGGTCCTGGGATGAGTTGCCCCGGGCTGCAAATTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp GAGCGTCCCCCGAGCTGGGCAGCACCTCGAGAACTTGGTGGCAAAGCACAGGCCGATGCATCCTGCATTTaGTGCTTGTGGAAGGCGCCT +
Preference number: 4 (lower is better)
Translates to: ERPPSWAAPRELGGKAQADASCI*CLWKAP
Trigger: AGGCGCCTTCCACAAGCACCAAATGCAGGATGCATC...GGCCTGTGCTTTGCCACCAAGTTCTCGAGGTGCTGCCCAGCTCGGGGGACGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp ATAGTGCAGAGCGTCCCCCGAGCTGGGCAGCACCTCGAGAACTTGGTGGCAAAGAGCAGGTTCTCCTGCTaGCGCTTCTCGATGCGCAGC +
Preference number: 4 (lower is better)
Translates to: IVQSVPRAGQHLENLVAKSRFSC*RFSMRS
Trigger: GCTGCGCATCGAGAAGCGCCAGCAGGAGAACCTGCT...CTTTGCCACCAAGTTCTCGAGGTGCTGCCCAGCTCGGGGGACGCTCTGCACTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp AGGTTGATGATGGCCACAGTGAGCAGGCTGCCGATGGTCAGGACGGCCAGGGTCCCAGCTTCATGCCCATaGAGATGTGGGCCGGAAGCA +
Preference number: 4 (lower is better)
Translates to: RLMMATVSRLPMVRTARVPASCP*RCGPEA
Trigger: TGCTTCCGGCCCACATCTCCATGGGCATGAAGCTGG...GACCCTGGCCGTCCTGACCATCGGCAGCCTGCTCACTGTGGCCATCATCAACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp CGAGCTGGGCAGCACCTCGAGAACTTGGTGGCAAAGCACAGGCCCAGCACCAGCCTCACGCTCTCACGGTaGTTGAGATGTGCAAAGGGC +
Preference number: 4 (lower is better)
Translates to: RAGQHLENLVAKHRPSTSLTLSR*LRCAKG
Trigger: GCCCTTTGCACATCTCAACCACCGTGAGAGCGTGAG...GCTGGTGCTGGGCCTGTGCTTTGCCACCAAGTTCTCGAGGTGCTGCCCAGCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp CAACATGCACAGCCATCTGCATGCCTTTGGGATTGGCGTGGGGCGGAGAGTCTTCGCCCGTTGGGGACGTaGGTCTCACCACTGCTCACG +
Preference number: 4 (lower is better)
Translates to: QHAQPSACLWDWRGAESLRPLGT*VSPLLT
Trigger: CGTGAGCAGTGGTGAGACCCACGTCCCCAACGGGCG...AAGACTCTCCGCCCCACGCCAATCCCAAAGGCATGCAGATGGCTGTGCATGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
CDS-3UTR CCA 90 bp GACGAAGATCAGGCTGGCGCAGGCAAAGTCGTGGCGGGCCCGGGGGATGGGTGCCCTTCTCCAGGAAGATaGACCCAAAGGTGTAGAAGT +
Preference number: 4 (lower is better)
Translates to: DEDQAGAGKVVAGPGDGCPSPGR*TQRCRS
Trigger: ACTTCTACACCTTTGGGTCCATCTTCCTGGAGAAGG...GCACCCATCCCCCGGGCCCGCCACGACTTTGCCTGCGCCAGCCTGATCTTCGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp GGGGATGGGTGCCAGGCGGTACTCGCGCTCAAAGCCCTTCTCCAGGAAGATGGAGGCAGCTCTGGAACTTaGAAAGGCATCAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GDGCQAVLALKALLQEDGGSSGT*KGIRGR
Trigger: CCTGCCCCTGATGCCTTTCCAAGTTCCAGAGCTGCC...TCCATCTTCCTGGAGAAGGGCTTTGAGCGCGAGTACCGCCTGGCACCCATCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp GCAGCACCTCGAGAACTTGGTGGCAAAGCACAGGCCCAGCACCAGCCCCAGTACACCATGACACCAATGTaGGCATGCTGCCGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: AAPRELGGKAQAQHQPQYTMTPM*ACCRSS
Trigger: GCTGGAGCGGCAGCATGCCCACATTGGTGTCATGGT...GTACTGGGGCTGGTGCTGGGCCTGTGCTTTGCCACCAAGTTCTCGAGGTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673973.1
CDS-3UTR CCA 90 bp GAGATAGTGCAGAGCGTCCCCCGAGCTGGGCAGCACCTCGAGAACTTGGTGGCAGCAATCACAGGCCCATaGTTTATGCCGACGCGGAGG +
Preference number: 4 (lower is better)
Translates to: EIVQSVPRAGQHLENLVAAITGP*FMPTRR
Trigger: CCTCCGCGTCGGCATAAACCATGGGCCTGTGATTGC...TGCCACCAAGTTCTCGAGGTGCTGCCCAGCTCGGGGGACGCTCTGCACTATCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673973.1
CDS-3UTR CCA 90 bp CGAGCTGGGCAGCACCTCGAGAACTTGGTGGCAAAGCACAGGCCCAGCACCAGCTTCAGGGAAGGAGACTaGCTTCCCGGCCTTTTCGGA +
Preference number: 4 (lower is better)
Translates to: RAGQHLENLVAKHRPSTSFREGD*LPGLFG
Trigger: TCCGAAAAGGCCGGGAAGCCAGTCTCCTTCCCTGAA...GCTGGTGCTGGGCCTGTGCTTTGCCACCAAGTTCTCGAGGTGCTGCCCAGCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673973.1
CDS-3UTR CCA 90 bp GATAGTGCAGAGCGTCCCCCGAGCTGGGCAGCACCTCGAGAACTTGGTGGCAAACCATCTGCATGCCTTTaGGATTGGCGTGGGGCGGAG +
Preference number: 4 (lower is better)
Translates to: DSAERPPSWAAPRELGGKPSACL*DWRGAE
Trigger: CTCCGCCCCACGCCAATCCCAAAGGCATGCAGATGG...TTTGCCACCAAGTTCTCGAGGTGCTGCCCAGCTCGGGGGACGCTCTGCACTATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673973.1
CDS-3UTR CCA 90 bp GAATGCCTCTGTGAGAAATGCTGTCATTGCCAGGCCCACCAGGGAGAGGGAGTCGCAGTTCCTCAGCTCTaGCTCTCCTCCCCGGCCCCA +
Preference number: 4 (lower is better)
Translates to: ECLCEKCCHCQAHQGEGVAVPQL*LSSPAP
Trigger: TGGGGCCGGGGAGGAGAGCCAGAGCTGAGGAACTGC...GACTCCCTCTCCCTGGTGGGCCTGGCAATGACAGCATTTCTCACAGAGGCATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673801.1
3UTR CAA 72 bp TGCAGGTGTAGTACGGGAGGGGCTCACACAGGGCTCTaGTCTTGCTGCTCGCGGCCAGTAGGCCTGTCTCAT +
Preference number: 4 (lower is better)
Translates to: CRCSTGGAHTGL*SCCSRPVGLSH
Trigger: ATGAGACAGGCCTACTGGCCGCGAGCAGCAAGACAAGAGCCCTGTGTGAGCCCCTCCCGTACTACACCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673973.1
CDS-3UTR TCA 90 bp GCTCTTGTCTTGCTGCTCGCGGCCAGTAGGCCTGTCTCATTGCCAACAGGCAGCGCCCATGCTGGCTGGTaGGCTGGTACTTCTCGTAGA +
Preference number: 4 (lower is better)
Translates to: ALVLLLAASRPVSLPTGSAHAGW*AGTSRR
Trigger: TCTACGAGAAGTACCAGCTCACCAGCCAGCATGGGC...GCTGCCTGTTGGCAATGAGACAGGCCTACTGGCCGCGAGCAGCAAGACAAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR TCA 90 bp AGGACATGGACGAGCAGGATGCAGACGAAGATCAGGCTGGCGCAGGCAAAGTCGCAGCGCCCCGCATGCTaGAGGGCAGTAGTGTGTACA +
Preference number: 4 (lower is better)
Translates to: RTWTSRMQTKIRLAQAKSQRPAC*RAVVCT
Trigger: TGTACACACTACTGCCCTTCAGCATGCGGGGCGCTG...CGACTTTGCCTGCGCCAGCCTGATCTTCGTCTGCATCCTGCTCGTCCATGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR TCA 90 bp TCAGCATTTGTGAGGGGGCGGGCTTCCCAGATCCAGGAGCCTCTGCATGCACCCAGTCGCCGAGGATCTTaGTTCGCATGCACTCGTTGG +
Preference number: 4 (lower is better)
Translates to: SAFVRGRASQIQEPLHAPSRRGS*FACTRW
Trigger: CCAACGAGTGCATGCGAATCAAGATCCTCGGCGACT...GGGTGCATGCAGAGGCTCCTGGATCTGGGAAGCCCGCCCCCTCACAAATGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp GGGGATGGGTGCCAGGCGGTACTCGCGCTCAAAGCCCTTCTCCAGGAAGATGGAAGTCGCCGAGGATCTTaGTTCGCATGCACTCGTTGG +
Preference number: 4 (lower is better)
Translates to: GDGCQAVLALKALLQEDGSRRGS*FACTRW
Trigger: CCAACGAGTGCATGCGAATCAAGATCCTCGGCGACT...TCCATCTTCCTGGAGAAGGGCTTTGAGCGCGAGTACCGCCTGGCACCCATCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR TCA 90 bp AGAATACACCTGCCCTTCCTCGGGCTGATAAAGCCACACGACACAGCACAGGCATTAGCGTGGCCTCCGTaGTGTGCACCCGGCCGGGTA +
Preference number: 4 (lower is better)
Translates to: RIHLPFLGLIKPHDTAQALAWPP*CAPGRV
Trigger: TACCCGGCCGGGTGCACATCACGGAGGCCACGCTAA...TGCCTGTGCTGTGTCGTGTGGCTTTATCAGCCCGAGGAAGGGCAGGTGTATTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp GTGTCTAGAAAAACAGACCTCACTTGTGCGTGCCCACAGGCCACTGAGGTGGAACCGGGTCATGCGCACTaGCGCCCGCATCTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: VSRKTDLTCACPQATEVEPGHAH*RPHLQG
Trigger: GCCCTGAAGATGCGGGCGTCAGTGCGCATGACCCGG...TTCCACCTCAGTGGCCTGTGGGCACGCACAAGTGAGGTCTGTTTTTCTAGACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp CACCTGCCCTTCCTCGGGCTGATAAAGCCACACGACACAGCACAGGCAGACAGGTTCAGCCCCAGCCCCTaGAACTTGGCAGTGTCCGTA +
Preference number: 4 (lower is better)
Translates to: HLPFLGLIKPHDTAQADRFSPSP*NLAVSV
Trigger: TACGGACACTGCCAAGTTTCAGGGGCTGGGGCTGAA...CCTGTCTGCCTGTGCTGTGTCGTGTGGCTTTATCAGCCCGAGGAAGGGCAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp CACCTGCCCTTCCTCGGGCTGATAAAGCCACACGACACAGCACAGGCAGACAGGTCAGCCCCGAACCAGTaGACATTCTCCAGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: HLPFLGLIKPHDTAQADRSAPNQ*TFSSWP
Trigger: AGGCCAGCTGGAGAATGTTCACTGGTTCGGGGCTGA...CCTGTCTGCCTGTGCTGTGTCGTGTGGCTTTATCAGCCCGAGGAAGGGCAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp AACGGCTCAGCATTTGTGAGGGGGCGGGCTTCCCAGATCCAGGAGCCTCTGCATCAACAGAAACCTTCCTaGCTTGCCAGGAGAGCCCCC +
Preference number: 4 (lower is better)
Translates to: NGSAFVRGRASQIQEPLHQQKPS*LARRAP
Trigger: GGGGGCTCTCCTGGCAAGTCAGGAAGGTTTCTGTTG...ATGCAGAGGCTCCTGGATCTGGGAAGCCCGCCCCCTCACAAATGCTGAGCCGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp AGGACATGGACGAGCAGGATGCAGACGAAGATCAGGCTGGCGCAGGCAAAGTCGAGGCCTCACTCACTGTaGCGCCAGCATCCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: RTWTSRMQTKIRLAQAKSRPHSL*RQHPPV
Trigger: CACAGGAGGATGCTGGCGGCACAGTGAGTGAGGCCT...CGACTTTGCCTGCGCCAGCCTGATCTTCGTCTGCATCCTGCTCGTCCATGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537579.5
ENST00000673973.1
CDS-3UTR GCA 90 bp AGAATACACCTGCCCTTCCTCGGGCTGATAAAGCCACACGACACAGCACAGGCAGGCCTCTGGGCCTGCTaGTCCATGGCCAACAAGGGG +
Preference number: 4 (lower is better)
Translates to: RIHLPFLGLIKPHDTAQAGLWAC*SMANKG
Trigger: CCCCTTGTTGGCCATGGAGCAGCAGGCCCAGAGGCC...TGCCTGTGCTGTGTCGTGTGGCTTTATCAGCCCGAGGAAGGGCAGGTGTATTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp GGGAGAGGGAGTCTCCAATCCGTGCTAGACAGCTCAGCTTACTCCCCCTTGGTGGCACCAGGAACGCCATaGCCAGAATGGCCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: GRGSLQSVLDSSAYSPLVAPGTP*PEWPGV
Trigger: GACACCAGGCCATTCTGGGCATGGCGTTCCTGGTGC...CACCAAGGGGGAGTAAGCTGAGCTGTCTAGCACGGATTGGAGACTCCCTCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp TCAGCATTTGTGAGGGGGCGGGCTTCCCAGATCCAGGAGCCTCTGCATGCACCCGGCCGCCTTTGTCCATaGGTCGAACACCAGCACATA +
Preference number: 4 (lower is better)
Translates to: SAFVRGRASQIQEPLHAPGRLCP*VEHQHI
Trigger: TATGTGCTGGTGTTCGACGCATGGACAAAGGCGGCC...GGGTGCATGCAGAGGCTCCTGGATCTGGGAAGCCCGCCCCCTCACAAATGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp GATGGGTGCCAGGCGGTACTCGCGCTCAAAGCCCTTCTCCAGGAAGATGGACCCGGCCGCCTTTGTCCATaGGTCGAACACCAGCACATA +
Preference number: 4 (lower is better)
Translates to: DGCQAVLALKALLQEDGPGRLCP*VEHQHI
Trigger: TATGTGCTGGTGTTCGACGCATGGACAAAGGCGGCC...GGGTCCATCTTCCTGGAGAAGGGCTTTGAGCGCGAGTACCGCCTGGCACCCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR GCA 90 bp AGCAACAGAAACCTTCCTGACTTGCCAGGAGAGCCCCCGCCGGGCAGCCCTGGTGAAGAGGTCCCGGGATaGATCCTGCATTTGGTGCTT +
Preference number: 4 (lower is better)
Translates to: SNRNLPDLPGEPPPGSPGEEVPG*ILHLVL
Trigger: AAGCACCAAATGCAGGATGCATCCCGGGACCTCTTC...ACCAGGGCTGCCCGGCGGGGGCTCTCCTGGCAAGTCAGGAAGGTTTCTGTTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp GGGCTGTGTCTCCACCCTCTCAGAGATAGTGCAGAGCGTCCCCCGAGCTGGGCAGAAGAGGTCCCGGGATaGATCCTGCATTTGGTGCTT +
Preference number: 4 (lower is better)
Translates to: GLCLHPLRDSAERPPSWAEEVPG*ILHLVL
Trigger: AAGCACCAAATGCAGGATGCATCCCGGGACCTCTTC...TGCCCAGCTCGGGGGACGCTCTGCACTATCTCTGAGAGGGTGGAGACACAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR GCA 90 bp TCCCCCGAGCTGGGCAGCACCTCGAGAACTTGGTGGCAAAGCACAGGCCCAGCAGAAGAGGTCCCGGGATaGATCCTGCATTTGGTGCTT +
Preference number: 4 (lower is better)
Translates to: SPELGSTSRTWWQSTGPAEEVPG*ILHLVL
Trigger: AAGCACCAAATGCAGGATGCATCCCGGGACCTCTTC...TGCTGGGCCTGTGCTTTGCCACCAAGTTCTCGAGGTGCTGCCCAGCTCGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR GCA 90 bp GTTTCAGAGCAAGAACGGCTCAGCATTTGTGAGGGGGCGGGCTTCCCAGATCCAGCTGGCGCTTCTCGATaGGCAGCTTCCGGCGGATCT +
Preference number: 4 (lower is better)
Translates to: VSEQERLSICEGAGFPDPAGASR*AASGGS
Trigger: AGATCCGCCGGAAGCTGCGCATCGAGAAGCGCCAGC...TGGATCTGGGAAGCCCGCCCCCTCACAAATGCTGAGCCGTTCTTGCTCTGAAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp GTCTTGCTGCTCGCGGCCAGTAGGCCTGTCTCATTGCCAACAGGCAGCTCTGGATACGCCTTGTCCAGGTaGTTTAGCGTGGCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: VLLLAASRPVSLPTGSSGYALSR*FSVASV
Trigger: CACGGAGGCCACGCTAAAGCACCTGGACAAGGCGTA...TCCAGAGCTGCCTGTTGGCAATGAGACAGGCCTACTGGCCGCGAGCAGCAAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567277.6
ENST00000673973.1
CDS-3UTR GCA 90 bp AGGGCTCTTGTCTTGCTGCTCGCGGCCAGTAGGCCTGTCTCATTGCCAACAGGCTACGCCTTGTCCAGGTaGTTTAGCGTGGCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: RALVLLLAASRPVSLPTGYALSR*FSVASV
Trigger: CACGGAGGCCACGCTAAAGCACCTGGACAAGGCGTA...GCCTGTTGGCAATGAGACAGGCCTACTGGCCGCGAGCAGCAAGACAAGAGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567277.6
ENST00000673973.1
CDS-3UTR GCA 90 bp CAACATGCACAGCCATCTGCATGCCTTTGGGATTGGCGTGGGGCGGAGAGTCTTGGGCTCTTGTCTTGCTaGTCGCGGCCAGTAGGCCTG +
Preference number: 4 (lower is better)
Translates to: QHAQPSACLWDWRGAESLGLLSC*SRPVGL
Trigger: CAGGCCTACTGGCCGCGAGCAGCAAGACAAGAGCCC...AAGACTCTCCGCCCCACGCCAATCCCAAAGGCATGCAGATGGCTGTGCATGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp GGGAGAGGGAGTCTCCAATCCGTGCTAGACAGCTCAGCTTACTCCCCCTTGGTGGCTGAGCCCTGCAGCTaGCATGTACGTGCTGCCGAT +
Preference number: 4 (lower is better)
Translates to: GRGSLQSVLDSSAYSPLVAEPCS*HVRAAD
Trigger: ATCGGCAGCACGTACATGGCAGCTGCAGGGCTCAGC...CACCAAGGGGGAGTAAGCTGAGCTGTCTAGCACGGATTGGAGACTCCCTCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp GAATGCCTCTGTGAGAAATGCTGTCATTGCCAGGCCCACCAGGGAGAGGGAGTCGGCGACGCTGAGCCCTaGAGCTGCCATGTACGTGCT +
Preference number: 4 (lower is better)
Translates to: ECLCEKCCHCQAHQGEGVGDAEP*SCHVRA
Trigger: AGCACGTACATGGCAGCTGCAGGGCTCAGCGTCGCC...GACTCCCTCTCCCTGGTGGGCCTGGCAATGACAGCATTTCTCACAGAGGCATTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp CGAGCAGGATGCAGACGAAGATCAGGCTGGCGCAGGCAAAGTCGTGGCGGGCCCTTATGGCTCAGTGGCTaGTTCGAGCCAGAATCTGGT +
Preference number: 4 (lower is better)
Translates to: RAGCRRRSGWRRQSRGGPLWLSG*FEPESG
Trigger: ACCAGATTCTGGCTCGAAGCAGCCACTGAGCCATAA...GGGCCCGCCACGACTTTGCCTGCGCCAGCCTGATCTTCGTCTGCATCCTGCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673973.1
CDS-3UTR GCA 90 bp GAATGCCTCTGTGAGAAATGCTGTCATTGCCAGGCCCACCAGGGAGAGGGAGTCGAAACCTTCCTGACTTaGCAGGAGAGCCCCCGCCGG +
Preference number: 4 (lower is better)
Translates to: ECLCEKCCHCQAHQGEGVETFLT*QESPRR
Trigger: CCGGCGGGGGCTCTCCTGGCAAGTCAGGAAGGTTTC...GACTCCCTCTCCCTGGTGGGCCTGGCAATGACAGCATTTCTCACAGAGGCATTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp GTTCCCTCCACCGCCACCCCCGCACTTAGCTGTACTCTTAATTTGCAGCCCGGGCCTGTGCATCCAGACTaGGCTGACTCCACACGCAGT +
Preference number: 4 (lower is better)
Translates to: VPSTATPALSCTLNLQPGPVHPD*ADSTRS
Trigger: ACTGCGTGTGGAGTCAGCCCAGTCTGGATGCACAGG...CCCGGGCTGCAAATTAAGAGTACAGCTAAGTGCGGGGGTGGCGGTGGAGGGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp TTGTCTTGCTGCTCGCGGCCAGTAGGCCTGTCTCATTGCCAACAGGCAGCTCTGAGCAGCGGCCCATGCTaGCTGGTGAGCTGGTACTTC +
Preference number: 4 (lower is better)
Translates to: LSCCSRPVGLSHCQQAALSSGPC*LVSWYF
Trigger: GAAGTACCAGCTCACCAGCCAGCATGGGCCGCTGCT...CAGAGCTGCCTGTTGGCAATGAGACAGGCCTACTGGCCGCGAGCAGCAAGACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp CACCTGCCCTTCCTCGGGCTGATAAAGCCACACGACACAGCACAGGCAGACAGGCTGGAGGGGTCCCCCTaGCTGAAGGCAATGATGATG +
Preference number: 4 (lower is better)
Translates to: HLPFLGLIKPHDTAQADRLEGSP*LKAMMM
Trigger: CATCATCATTGCCTTCAGCCAGGGGGACCCCTCCAG...CCTGTCTGCCTGTGCTGTGTCGTGTGGCTTTATCAGCCCGAGGAAGGGCAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp AGGGCTCTTGTCTTGCTGCTCGCGGCCAGTAGGCCTGTCTCATTGCCAACAGGCCTGGAGGGGTCCCCCTaGCTGAAGGCAATGATGATG +
Preference number: 4 (lower is better)
Translates to: RALVLLLAASRPVSLPTGLEGSP*LKAMMM
Trigger: CATCATCATTGCCTTCAGCCAGGGGGACCCCTCCAG...GCCTGTTGGCAATGAGACAGGCCTACTGGCCGCGAGCAGCAAGACAAGAGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp AGCAACAGAAACCTTCCTGACTTGCCAGGAGAGCCCCCGCCGGGCAGCCCTGGTTGCATTTGGTGCTTGTaGAAGGCGCCTGTCAGGTTC +
Preference number: 4 (lower is better)
Translates to: SNRNLPDLPGEPPPGSPGCIWCL*KAPVRF
Trigger: GAACCTGACAGGCGCCTTCCACAAGCACCAAATGCA...ACCAGGGCTGCCCGGCGGGGGCTCTCCTGGCAAGTCAGGAAGGTTTCTGTTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp CTCTTGTCTTGCTGCTCGCGGCCAGTAGGCCTGTCTCATTGCCAACAGGCAGCTAGCAGGTTCTCCTGCTaGCGCTTCTCGATGCGCAGC +
Preference number: 4 (lower is better)
Translates to: LLSCCSRPVGLSHCQQAASRFSC*RFSMRS
Trigger: GCTGCGCATCGAGAAGCGCCAGCAGGAGAACCTGCT...AGCTGCCTGTTGGCAATGAGACAGGCCTACTGGCCGCGAGCAGCAAGACAAGAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp CACCTGCCCTTCCTCGGGCTGATAAAGCCACACGACACAGCACAGGCAGACAGGCCAGCTTCATGCCCATaGAGATGTGGGCCGGAAGCA +
Preference number: 4 (lower is better)
Translates to: HLPFLGLIKPHDTAQADRPASCP*RCGPEA
Trigger: TGCTTCCGGCCCACATCTCCATGGGCATGAAGCTGG...CCTGTCTGCCTGTGCTGTGTCGTGTGGCTTTATCAGCCCGAGGAAGGGCAGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp GATGGGTGCCAGGCGGTACTCGCGCTCAAAGCCCTTCTCCAGGAAGATGGACCCTGCACTCGTTGGCCTTaGCGATCTGGTCGAACTTGC +
Preference number: 4 (lower is better)
Translates to: DGCQAVLALKALLQEDGPCTRWP*RSGRTC
Trigger: GCAAGTTCGACCAGATCGCCAAGGCCAACGAGTGCA...GGGTCCATCTTCCTGGAGAAGGGCTTTGAGCGCGAGTACCGCCTGGCACCCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp AGCTTCATTTACCAGAATGCCTCTGTGAGAAATGCTGTCATTGCCAGGCCCACCGGCCTGGGGAGGTGTTaGCTGGGCGGGGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: SFIYQNASVRNAVIARPTGLGRC*LGGGGC
Trigger: GCAGCCACCCCCGCCCAGCCAACACCTCCCCAGGCC...GGTGGGCCTGGCAATGACAGCATTTCTCACAGAGGCATTCTGGTAAATGAAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp ACTCATCCCAGGACCCCAACAAGTCTGGTCAGTCACCCAATCTGCAACCCTGTAGTCCGGCGGTGGCGCTaGGGAACGCTCTTAGGCCTC +
Preference number: 4 (lower is better)
Translates to: THPRTPTSLVSHPICNPVVRRWR*GTLLGL
Trigger: GAGGCCTAAGAGCGTTCCCCAGCGCCACCGCCGGAC...TACAGGGTTGCAGATTGGGTGACTGACCAGACTTGTTGGGGTCCTGGGATGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
CDS-3UTR CCA 90 bp AACGGCTCAGCATTTGTGAGGGGGCGGGCTTCCCAGATCCAGGAGCCTCTGCATAGAAGTCATCGGACTTaGAGCAGCAGGGCCTCGTGG +
Preference number: 4 (lower is better)
Translates to: NGSAFVRGRASQIQEPLHRSHRT*SSRASW
Trigger: CCACGAGGCCCTGCTGCTCCAAGTCCGATGACTTCT...ATGCAGAGGCTCCTGGATCTGGGAAGCCCGCCCCCTCACAAATGCTGAGCCGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp GCTCTTGTCTTGCTGCTCGCGGCCAGTAGGCCTGTCTCATTGCCAACAGGCAGCAGACGAAGATCAGGCTaGCGCAGGCAAAGTCGTGGC +
Preference number: 4 (lower is better)
Translates to: ALVLLLAASRPVSLPTGSRRRSG*RRQSRG
Trigger: GCCACGACTTTGCCTGCGCCAGCCTGATCTTCGTCT...GCTGCCTGTTGGCAATGAGACAGGCCTACTGGCCGCGAGCAGCAAGACAAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp AGAACTTGGTGGCAAAGCACAGGCCCAGCACCAGCCCCAGTACACAGGCCACCAAGACGAAGATCAGGCTaGCGCAGGCAAAGTCGTGGC +
Preference number: 4 (lower is better)
Translates to: RTWWQSTGPAPAPVHRPPRRRSG*RRQSRG
Trigger: GCCACGACTTTGCCTGCGCCAGCCTGATCTTCGTCT...TGGTGGCCTGTGTACTGGGGCTGGTGCTGGGCCTGTGCTTTGCCACCAAGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp AACGGCTCAGCATTTGTGAGGGGGCGGGCTTCCCAGATCCAGGAGCCTCTGCATGGCAGCTCTGGAACTTaGAAAGGCATCAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: NGSAFVRGRASQIQEPLHGSSGT*KGIRGR
Trigger: CCTGCCCCTGATGCCTTTCCAAGTTCCAGAGCTGCC...ATGCAGAGGCTCCTGGATCTGGGAAGCCCGCCCCCTCACAAATGCTGAGCCGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp CACCTGCCCTTCCTCGGGCTGATAAAGCCACACGACACAGCACAGGCAGACAGGGGCAGCTCTGGAACTTaGAAAGGCATCAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: HLPFLGLIKPHDTAQADRGSSGT*KGIRGR
Trigger: CCTGCCCCTGATGCCTTTCCAAGTTCCAGAGCTGCC...CCTGTCTGCCTGTGCTGTGTCGTGTGGCTTTATCAGCCCGAGGAAGGGCAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp GTTCCCTCCACCGCCACCCCCGCACTTAGCTGTACTCTTAATTTGCAGCCCGGGCCTTTGGGATTGGCGTaGGGCGGAGAGTCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: VPSTATPALSCTLNLQPGPLGLA*GGESSP
Trigger: AGGAGAAGACTCTCCGCCCCACGCCAATCCCAAAGG...CCCGGGCTGCAAATTAAGAGTACAGCTAAGTGCGGGGGTGGCGGTGGAGGGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp GTTTCAGAGCAAGAACGGCTCAGCATTTGTGAGGGGGCGGGCTTCCCAGATCCAGCATCCAGACTGGGCTaGCTCCACACGCAGTTCCTC +
Preference number: 4 (lower is better)
Translates to: VSEQERLSICEGAGFPDPASRLG*LHTQFL
Trigger: GAGGAACTGCGTGTGGAGTCAGCCCAGTCTGGATGC...TGGATCTGGGAAGCCCGCCCCCTCACAAATGCTGAGCCGTTCTTGCTCTGAAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp GGGCTGTGTCTCCACCCTCTCAGAGATAGTGCAGAGCGTCCCCCGAGCTGGGCAACACCACGAAGACAATaGACAGGAAGAAGGGCACCT +
Preference number: 4 (lower is better)
Translates to: GLCLHPLRDSAERPPSWATPRRQ*TGRRAP
Trigger: AGGTGCCCTTCTTCCTGTTCATTGTCTTCGTGGTGT...TGCCCAGCTCGGGGGACGCTCTGCACTATCTCTGAGAGGGTGGAGACACAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR TCA 90 bp GAGCTGGGCAGCACCTCGAGAACTTGGTGGCAAAGCACAGGCCCAGCACCAGCCACACCACGAAGACAATaGACAGGAAGAAGGGCACCT +
Preference number: 4 (lower is better)
Translates to: ELGSTSRTWWQSTGPAPATPRRQ*TGRRAP
Trigger: AGGTGCCCTTCTTCCTGTTCATTGTCTTCGTGGTGT...GGCTGGTGCTGGGCCTGTGCTTTGCCACCAAGTTCTCGAGGTGCTGCCCAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR TCA 90 bp GTTCCCTCCACCGCCACCCCCGCACTTAGCTGTACTCTTAATTTGCAGCCCGGGGGACACTGGGTGTCGTaGAGCCTCCCATCAAAGAAC +
Preference number: 4 (lower is better)
Translates to: VPSTATPALSCTLNLQPGGHWVS*SLPSKN
Trigger: GTTCTTTGATGGGAGGCTTCACGACACCCAGTGTCC...CCCGGGCTGCAAATTAAGAGTACAGCTAAGTGCGGGGGTGGCGGTGGAGGGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp GGACATGGACGAGCAGGATGCAGACGAAGATCAGGCTGGCGCAGGCAAAGTCGTTCCCACACAGGAAGATaGCTGCGTTGGCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: GHGRAGCRRRSGWRRQSRSHTGR*LRWPAA
Trigger: AGCTGCTGGCCAACGCAGTCATCTTCCTGTGTGGGA...ACGACTTTGCCTGCGCCAGCCTGATCTTCGTCTGCATCCTGCTCGTCCATGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR TCA 90 bp GTTCCCTCCACCGCCACCCCCGCACTTAGCTGTACTCTTAATTTGCAGCCCGGGTCTTCTCCACGCCGCTaGACTTGGGCTTCAGTAGGA +
Preference number: 4 (lower is better)
Translates to: VPSTATPALSCTLNLQPGSSPRR*TWASVG
Trigger: TCCTACTGAAGCCCAAGTTCAGCGGCGTGGAGAAGA...CCCGGGCTGCAAATTAAGAGTACAGCTAAGTGCGGGGGTGGCGGTGGAGGGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp CACCTGCCCTTCCTCGGGCTGATAAAGCCACACGACACAGCACAGGCAGACAGGTCTTCTCCACGCCGCTaGACTTGGGCTTCAGTAGGA +
Preference number: 4 (lower is better)
Translates to: HLPFLGLIKPHDTAQADRSSPRR*TWASVG
Trigger: TCCTACTGAAGCCCAAGTTCAGCGGCGTGGAGAAGA...CCTGTCTGCCTGTGCTGTGTCGTGTGGCTTTATCAGCCCGAGGAAGGGCAGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp TGCTCCCCGCCTTCTTGCTGTGACCACATTCCTCAGGACTCTATCCCCACAGCCTTCAGCCCCAGCCCCTaGAACTTGGCAGTGTCCGTA +
Preference number: 4 (lower is better)
Translates to: CSPPSCCDHIPQDSIPTAFSPSP*NLAVSV
Trigger: TACGGACACTGCCAAGTTTCAGGGGCTGGGGCTGAA...GGCTGTGGGGATAGAGTCCTGAGGAATGTGGTCACAGCAAGAAGGCGGGGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp AGAAGCCAACATGCACAGCCATCTGCATGCCTTTGGGATTGGCGTGGGGCGGAGCCCGCCTTCTTGCTGTaGCCACATTCCTCAGGACTC +
Preference number: 4 (lower is better)
Translates to: RSQHAQPSACLWDWRGAEPAFLL*PHSSGL
Trigger: GAGTCCTGAGGAATGTGGTCACAGCAAGAAGGCGGG...CTCCGCCCCACGCCAATCCCAAAGGCATGCAGATGGCTGTGCATGTTGGCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp GGGCAGCACCTCGAGAACTTGGTGGCAAAGCACAGGCCCAGCACCAGCCCCAGTAGAGTACAAATATGCTaGCCTCAGAGAGGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: GQHLENLVAKHRPSTSPSRVQIC*PQRGPV
Trigger: CACTGGGCCTCTCTGAGGTCAGCATATTTGTACTCT...ACTGGGGCTGGTGCTGGGCCTGTGCTTTGCCACCAAGTTCTCGAGGTGCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673973.1
CDS-3UTR GCA 90 bp CAACATGCACAGCCATCTGCATGCCTTTGGGATTGGCGTGGGGCGGAGAGTCTTGCACCAGGAACGCCATaGCCAGAATGGCCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: QHAQPSACLWDWRGAESLAPGTP*PEWPGV
Trigger: GACACCAGGCCATTCTGGGCATGGCGTTCCTGGTGC...AAGACTCTCCGCCCCACGCCAATCCCAAAGGCATGCAGATGGCTGTGCATGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp GTTTCAGAGCAAGAACGGCTCAGCATTTGTGAGGGGGCGGGCTTCCCAGATCCAGCACCAGGAACGCCATaGCCAGAATGGCCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: VSEQERLSICEGAGFPDPAPGTP*PEWPGV
Trigger: GACACCAGGCCATTCTGGGCATGGCGTTCCTGGTGC...TGGATCTGGGAAGCCCGCCCCCTCACAAATGCTGAGCCGTTCTTGCTCTGAAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp GTTCCCTCCACCGCCACCCCCGCACTTAGCTGTACTCTTAATTTGCAGCCCGGGGCATCCTGCATTTGGTaGTTGTGGAAGGCGCCTGTC +
Preference number: 4 (lower is better)
Translates to: VPSTATPALSCTLNLQPGASCIW*LWKAPV
Trigger: GACAGGCGCCTTCCACAAGCACCAAATGCAGGATGC...CCCGGGCTGCAAATTAAGAGTACAGCTAAGTGCGGGGGTGGCGGTGGAGGGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp GGGAGAGGGAGTCTCCAATCCGTGCTAGACAGCTCAGCTTACTCCCCCTTGGTGTACGCCTTGTCCAGGTaGTTTAGCGTGGCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: GRGSLQSVLDSSAYSPLVYALSR*FSVASV
Trigger: CACGGAGGCCACGCTAAAGCACCTGGACAAGGCGTA...CACCAAGGGGGAGTAAGCTGAGCTGTCTAGCACGGATTGGAGACTCCCTCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp AGAAGCCAACATGCACAGCCATCTGCATGCCTTTGGGATTGGCGTGGGGCGGAGTACGCCTTGTCCAGGTaGTTTAGCGTGGCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: RSQHAQPSACLWDWRGAEYALSR*FSVASV
Trigger: CACGGAGGCCACGCTAAAGCACCTGGACAAGGCGTA...CTCCGCCCCACGCCAATCCCAAAGGCATGCAGATGGCTGTGCATGTTGGCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp TTAATTTGCAGCCCGGGGCAACTCATCCCAGGACCCCAACAAGTCTGGTCAGTCCGAGGTACCGGGTCATaGGCACTGACGCCCGCATCT +
Preference number: 4 (lower is better)
Translates to: LICSPGQLIPGPQQVWSVRGTGS*ALTPAS
Trigger: AGATGCGGGCGTCAGTGCGCATGACCCGGTACCTCG...GACTGACCAGACTTGTTGGGGTCCTGGGATGAGTTGCCCCGGGCTGCAAATTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp GGGCTCTTGTCTTGCTGCTCGCGGCCAGTAGGCCTGTCTCATTGCCAACAGGCACATGGACGAGCAGGATaGAGACGAAGATCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GLLSCCSRPVGLSHCQQAHGRAG*RRRSGW
Trigger: CCAGCCTGATCTTCGTCTGCATCCTGCTCGTCCATG...TGCCTGTTGGCAATGAGACAGGCCTACTGGCCGCGAGCAGCAAGACAAGAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR GCA 90 bp AGAATACACCTGCCCTTCCTCGGGCTGATAAAGCCACACGACACAGCACAGGCAGAAGGACACACCCAGTaGCGCCGTCCTGGGCATGAG +
Preference number: 4 (lower is better)
Translates to: RIHLPFLGLIKPHDTAQAEGHTQ*RRPGHE
Trigger: CTCATGCCCAGGACGGCGGCACTGGGTGTGTCCTTC...TGCCTGTGCTGTGTCGTGTGGCTTTATCAGCCCGAGGAAGGGCAGGTGTATTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp AGCAGGGGCTGTGTCTCCACCCTCTCAGAGATAGTGCAGAGCGTCCCCCGAGCTGTAGGCCTGTCTCATTaGCAACAGGCAGCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: SRGCVSTLSEIVQSVPRAVGLSH*QQAALE
Trigger: TTCCAGAGCTGCCTGTTGGCAATGAGACAGGCCTAC...AGCTCGGGGGACGCTCTGCACTATCTCTGAGAGGGTGGAGACACAGCCCCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR GCA 90 bp CAACATGCACAGCCATCTGCATGCCTTTGGGATTGGCGTGGGGCGGAGAGTCTTGCTGAGCCCTGCAGCTaGCATGTACGTGCTGCCGAT +
Preference number: 4 (lower is better)
Translates to: QHAQPSACLWDWRGAESLAEPCS*HVRAAD
Trigger: ATCGGCAGCACGTACATGGCAGCTGCAGGGCTCAGC...AAGACTCTCCGCCCCACGCCAATCCCAAAGGCATGCAGATGGCTGTGCATGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp AGAATACACCTGCCCTTCCTCGGGCTGATAAAGCCACACGACACAGCACAGGCAAGCTCCTGGTTCTCGTaGCCTGAGGCGACGCTGAGC +
Preference number: 4 (lower is better)
Translates to: RIHLPFLGLIKPHDTAQASSWFS*PEATLS
Trigger: GCTCAGCGTCGCCTCAGGGCACGAGAACCAGGAGCT...TGCCTGTGCTGTGTCGTGTGGCTTTATCAGCCCGAGGAAGGGCAGGTGTATTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp GTTTCAGAGCAAGAACGGCTCAGCATTTGTGAGGGGGCGGGCTTCCCAGATCCAACACCAATGTGGGCATaGTGCCGCTCCAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: VSEQERLSICEGAGFPDPTPMWA*CRSSSW
Trigger: CCAGGAGCTGGAGCGGCAGCATGCCCACATTGGTGT...TGGATCTGGGAAGCCCGCCCCCTCACAAATGCTGAGCCGTTCTTGCTCTGAAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp AACGGCTCAGCATTTGTGAGGGGGCGGGCTTCCCAGATCCAGGAGCCTCTGCATGAGAAATGCTGTCATTaGCAGGCCCACCAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: NGSAFVRGRASQIQEPLHEKCCH*QAHQGE
Trigger: CTCTCCCTGGTGGGCCTGGCAATGACAGCATTTCTC...ATGCAGAGGCTCCTGGATCTGGGAAGCCCGCCCCCTCACAAATGCTGAGCCGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp CTTCTGGCCTCCCCTGCGCATTATGGCTCAGTGGCTGCTTCGAGCCAGAATCTGTCAAAGGCAAGGCTCTaGTGCTCCCCGCCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: LLASPAHYGSVAASSQNLSKARL*CSPPSC
Trigger: GCAAGAAGGCGGGGAGCAGCAGAGCCTTGCCTTTGA...CAGATTCTGGCTCGAAGCAGCCACTGAGCCATAATGCGCAGGGGAGGCCAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp GAGAACTTGGTGGCAAAGCACAGGCCCAGCACCAGCCCCAGTACACAGGCCACCCACCTCTCTCCAGAATaGTTGCCTCACAAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: ENLVAKHRPSTSPSTQATHLSPE*LPHKLP
Trigger: AGGCAGCTTGTGAGGCAAGCATTCTGGAGAGAGGTG...GGTGGCCTGTGTACTGGGGCTGGTGCTGGGCCTGTGCTTTGCCACCAAGTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673973.1
CDS-3UTR GCA 90 bp AGCAACAGAAACCTTCCTGACTTGCCAGGAGAGCCCCCGCCGGGCAGCCCTGGTGCTGTACTCTTAATTTaGAGCCCGGGGCAACTCATC +
Preference number: 4 (lower is better)
Translates to: SNRNLPDLPGEPPPGSPGAVLLI*SPGQLI
Trigger: GATGAGTTGCCCCGGGCTGCAAATTAAGAGTACAGC...ACCAGGGCTGCCCGGCGGGGGCTCTCCTGGCAAGTCAGGAAGGTTTCTGTTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp AGAATACACCTGCCCTTCCTCGGGCTGATAAAGCCACACGACACAGCACAGGCAGGGTCCGCACAGCTCTaGCACCAGGCCTCACTCACT +
Preference number: 4 (lower is better)
Translates to: RIHLPFLGLIKPHDTAQAGSAQL*HQASLT
Trigger: AGTGAGTGAGGCCTGGTGCCAGAGCTGTGCGGACCC...TGCCTGTGCTGTGTCGTGTGGCTTTATCAGCCCGAGGAAGGGCAGGTGTATTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp CACCTTACTTTCAAAGCACCTCTCTCCAGAATGCTTGCCTCACAAGCTGCCTCAGCAGGCAAGCAGGGCTaGGGAGAGGGCCTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: HLTFKAPLSRMLASQAASAGKQG*GEGLWA
Trigger: GGCCCAGAGGCCCTCTCCCCAGCCCTGCTTGCCTGC...TGAGGCAGCTTGTGAGGCAAGCATTCTGGAGAGAGGTGCTTTGAAAGTAAGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp CCCTTCTTTGTTGACATCGCACTCTGTGTAGAACACTTTGAAGTCCGGCACGGAGCAGGCAAGCAGGGCTaGGGAGAGGGCCTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PFFVDIALCVEHFEVRHGAGKQG*GEGLWA
Trigger: GGCCCAGAGGCCCTCTCCCCAGCCCTGCTTGCCTGC...TCCGTGCCGGACTTCAAAGTGTTCTACACAGAGTGCGATGTCAACAAAGAAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673973.1
CDS-3UTR CCA 90 bp ACTCATCCCAGGACCCCAACAAGTCTGGTCAGTCACCCAATCTGCAACCCTGTAGGAGGCCCCAGGGCCTaGAGGGCATCTGTCTGCCAA +
Preference number: 4 (lower is better)
Translates to: THPRTPTSLVSHPICNPVGGPRA*RASVCQ
Trigger: TTGGCAGACAGATGCCCTCCAGGCCCTGGGGCCTCC...TACAGGGTTGCAGATTGGGTGACTGACCAGACTTGTTGGGGTCCTGGGATGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp GAATGCCTCTGTGAGAAATGCTGTCATTGCCAGGCCCACCAGGGAGAGGGAGTCAGCAGCGGCCCATGCTaGCTGGTGAGCTGGTACTTC +
Preference number: 4 (lower is better)
Translates to: ECLCEKCCHCQAHQGEGVSSGPC*LVSWYF
Trigger: GAAGTACCAGCTCACCAGCCAGCATGGGCCGCTGCT...GACTCCCTCTCCCTGGTGGGCCTGGCAATGACAGCATTTCTCACAGAGGCATTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp CAGGTTGATGATGGCCACAGTGAGCAGGCTGCCGATGGTCAGGACGGCCAGGGTTGCATTTGGTGCTTGTaGAAGGCGCCTGTCAGGTTC +
Preference number: 4 (lower is better)
Translates to: QVDDGHSEQAADGQDGQGCIWCL*KAPVRF
Trigger: GAACCTGACAGGCGCCTTCCACAAGCACCAAATGCA...ACCCTGGCCGTCCTGACCATCGGCAGCCTGCTCACTGTGGCCATCATCAACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp GAGAACTTGGTGGCAAAGCACAGGCCCAGCACCAGCCCCAGTACACAGGCCACCGATGCATCCTGCATTTaGTGCTTGTGGAAGGCGCCT +
Preference number: 4 (lower is better)
Translates to: ENLVAKHRPSTSPSTQATDASCI*CLWKAP
Trigger: AGGCGCCTTCCACAAGCACCAAATGCAGGATGCATC...GGTGGCCTGTGTACTGGGGCTGGTGCTGGGCCTGTGCTTTGCCACCAAGTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp GCAGCACCTCGAGAACTTGGTGGCAAAGCACAGGCCCAGCACCAGCCCCAGTACGATGCATCCTGCATTTaGTGCTTGTGGAAGGCGCCT +
Preference number: 4 (lower is better)
Translates to: AAPRELGGKAQAQHQPQYDASCI*CLWKAP
Trigger: AGGCGCCTTCCACAAGCACCAAATGCAGGATGCATC...GTACTGGGGCTGGTGCTGGGCCTGTGCTTTGCCACCAAGTTCTCGAGGTGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp GCTCCTGTATGCAAGACTTTGTGTAGAACTTTACGGGGTTCATGGGGACACCTAGGCGGGGGTGGCTGCTaGCTCCGGGGGTCGATGACC +
Preference number: 4 (lower is better)
Translates to: APVCKTLCRTLRGSWGHLGGGGC*LRGSMT
Trigger: GGTCATCGACCCCCGGAGCCAGCAGCCACCCCCGCC...TAGGTGTCCCCATGAACCCCGTAAAGTTCTACACAAAGTCTTGCATACAGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp AGCTTCATTTACCAGAATGCCTCTGTGAGAAATGCTGTCATTGCCAGGCCCACCTGGGGAGGTGTTGGCTaGGCGGGGGTGGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: SFIYQNASVRNAVIARPTWGGVG*AGVAAG
Trigger: GCCAGCAGCCACCCCCGCCCAGCCAACACCTCCCCA...GGTGGGCCTGGCAATGACAGCATTTCTCACAGAGGCATTCTGGTAAATGAAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp ATAGTGCAGAGCGTCCCCCGAGCTGGGCAGCACCTCGAGAACTTGGTGGCAAAGACCTCGAGAACTTGGTaGCAAAGCACAGGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: IVQSVPRAGQHLENLVAKTSRTW*QSTGPA
Trigger: TGCTGGGCCTGTGCTTTGCCACCAAGTTCTCGAGGT...CTTTGCCACCAAGTTCTCGAGGTGCTGCCCAGCTCGGGGGACGCTCTGCACTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp GCAGCACCTCGAGAACTTGGTGGCAAAGCACAGGCCCAGCACCAGCCCCAGTACGCCAACAGGCAGCTCTaGAACTTGGAAAGGCATCAG +
Preference number: 4 (lower is better)
Translates to: AAPRELGGKAQAQHQPQYANRQL*NLERHQ
Trigger: CTGATGCCTTTCCAAGTTCCAGAGCTGCCTGTTGGC...GTACTGGGGCTGGTGCTGGGCCTGTGCTTTGCCACCAAGTTCTCGAGGTGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp GGGAGAGGGAGTCTCCAATCCGTGCTAGACAGCTCAGCTTACTCCCCCTTGGTGACCATGACACCAATGTaGGCATGCTGCCGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GRGSLQSVLDSSAYSPLVTMTPM*ACCRSS
Trigger: GCTGGAGCGGCAGCATGCCCACATTGGTGTCATGGT...CACCAAGGGGGAGTAAGCTGAGCTGTCTAGCACGGATTGGAGACTCCCTCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp AGAAGCCAACATGCACAGCCATCTGCATGCCTTTGGGATTGGCGTGGGGCGGAGGCAATCACAGGCCCATaGTTTATGCCGACGCGGAGG +
Preference number: 4 (lower is better)
Translates to: RSQHAQPSACLWDWRGAEAITGP*FMPTRR
Trigger: CCTCCGCGTCGGCATAAACCATGGGCCTGTGATTGC...CTCCGCCCCACGCCAATCCCAAAGGCATGCAGATGGCTGTGCATGTTGGCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp TGCTCCCCGCCTTCTTGCTGTGACCACATTCCTCAGGACTCTATCCCCACAGCCCAGGCACAGAGCTTCTaGCCTCCCCTGCGCATTATG +
Preference number: 4 (lower is better)
Translates to: CSPPSCCDHIPQDSIPTAQAQSF*PPLRIM
Trigger: CATAATGCGCAGGGGAGGCCAGAAGCTCTGTGCCTG...GGCTGTGGGGATAGAGTCCTGAGGAATGTGGTCACAGCAAGAAGGCGGGGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp GAGATAGTGCAGAGCGTCCCCCGAGCTGGGCAGCACCTCGAGAACTTGGTGGCAGGACCCCAACAAGTCTaGTCAGTCACCCAATCTGCA +
Preference number: 4 (lower is better)
Translates to: EIVQSVPRAGQHLENLVAGPQQV*SVTQSA
Trigger: TGCAGATTGGGTGACTGACCAGACTTGTTGGGGTCC...TGCCACCAAGTTCTCGAGGTGCTGCCCAGCTCGGGGGACGCTCTGCACTATCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673973.1
CDS-3UTR CCA 90 bp GGGCTCTTGTCTTGCTGCTCGCGGCCAGTAGGCCTGTCTCATTGCCAACAGGCAAGAAGTCATCGGACTTaGAGCAGCAGGGCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: GLLSCCSRPVGLSHCQQARSHRT*SSRALS
Trigger: GGACAAGGCCCTGCTGCTCCAAGTCCGATGACTTCT...TGCCTGTTGGCAATGAGACAGGCCTACTGGCCGCGAGCAGCAAGACAAGAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537579.5
CDS-3UTR CCA 90 bp GAACAAAGATCTCAAAGTCAGCCCCGAACCAGTGAACATTCTCCAGCTGGCCTGGTCCGGCGGTGGCGCTaGGGAACGCTCACTGCTCAC +
Preference number: 4 (lower is better)
Translates to: EQRSQSQPRTSEHSPAGLVRRWR*GTLTAH
Trigger: GTGAGCAGTGAGCGTTCCCCAGCGCCACCGCCGGAC...CAGGCCAGCTGGAGAATGTTCACTGGTTCGGGGCTGACTTTGAGATCTTTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673973.1
CDS-3UTR TCA 90 bp GTTTCAGAGCAAGAACGGCTCAGCATTTGTGAGGGGGCGGGCTTCCCAGATCCAGCCCATGCTGGCTGGTaGGCTGGTACTTCTCGTAGA +
Preference number: 4 (lower is better)
Translates to: VSEQERLSICEGAGFPDPAHAGW*AGTSRR
Trigger: TCTACGAGAAGTACCAGCTCACCAGCCAGCATGGGC...TGGATCTGGGAAGCCCGCCCCCTCACAAATGCTGAGCCGTTCTTGCTCTGAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp ATAGTGCAGAGCGTCCCCCGAGCTGGGCAGCACCTCGAGAACTTGGTGGCAAAGACTTCACAGTGTAGGTaGAGAGGTCCCGGGATGCAT +
Preference number: 4 (lower is better)
Translates to: IVQSVPRAGQHLENLVAKTSQCR*RGPGMH
Trigger: ATGCATCCCGGGACCTCTTCACCTACACTGTGAAGT...CTTTGCCACCAAGTTCTCGAGGTGCTGCCCAGCTCGGGGGACGCTCTGCACTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR TCA 90 bp CTCTTGTCTTGCTGCTCGCGGCCAGTAGGCCTGTCTCATTGCCAACAGGCAGCTAGTCGCCGAGGATCTTaGTTCGCATGCACTCGTTGG +
Preference number: 4 (lower is better)
Translates to: LLSCCSRPVGLSHCQQAASRRGS*FACTRW
Trigger: CCAACGAGTGCATGCGAATCAAGATCCTCGGCGACT...AGCTGCCTGTTGGCAATGAGACAGGCCTACTGGCCGCGAGCAGCAAGACAAGAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR TCA 90 bp TCTAGAAAAACAGACCTCACTTGTGCGTGCCCACAGGCCACTGAGGTGGAAGTCCCTCCCGCACCTGCTTaGTGGCCTGGCACATGTCCA +
Preference number: 4 (lower is better)
Translates to: SRKTDLTCACPQATEVEVPPAPA*WPGTCP
Trigger: TGGACATGTGCCAGGCCATCAAGCAGGTGCGGGAGG...GACTTCCACCTCAGTGGCCTGTGGGCACGCACAAGTGAGGTCTGTTTTTCTAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp CACCTTACTTTCAAAGCACCTCTCTCCAGAATGCTTGCCTCACAAGCTGCCTCACCGGGTCATGCGCACTaGCGCCCGCATCTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: HLTFKAPLSRMLASQAASPGHAH*RPHLQG
Trigger: GCCCTGAAGATGCGGGCGTCAGTGCGCATGACCCGG...TGAGGCAGCTTGTGAGGCAAGCATTCTGGAGAGAGGTGCTTTGAAAGTAAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp AGGCTCCTGTATGCAAGACTTTGTGTAGAACTTTACGGGGTTCATGGGGACACCGCCCTGAGGCGACGCTaGGCCCTGCAGCTGCCATGT +
Preference number: 4 (lower is better)
Translates to: RLLYARLCVELYGVHGDTALRRR*ALQLPC
Trigger: ACATGGCAGCTGCAGGGCTCAGCGTCGCCTCAGGGC...GGTGTCCCCATGAACCCCGTAAAGTTCTACACAAAGTCTTGCATACAGGAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp AGGCTCCTGTATGCAAGACTTTGTGTAGAACTTTACGGGGTTCATGGGGACACCCTGGTTCTCGTGCCCTaGGGCGACGCTGAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: RLLYARLCVELYGVHGDTLVLVP*GDAEPC
Trigger: GCAGGGCTCAGCGTCGCCTCAGGGCACGAGAACCAG...GGTGTCCCCATGAACCCCGTAAAGTTCTACACAAAGTCTTGCATACAGGAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp GAATGCCTCTGTGAGAAATGCTGTCATTGCCAGGCCCACCAGGGAGAGGGAGTCTCAGCCCCGAACCAGTaGACATTCTCCAGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: ECLCEKCCHCQAHQGEGVSAPNQ*TFSSWP
Trigger: AGGCCAGCTGGAGAATGTTCACTGGTTCGGGGCTGA...GACTCCCTCTCCCTGGTGGGCCTGGCAATGACAGCATTTCTCACAGAGGCATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp CGAGCAGGATGCAGACGAAGATCAGGCTGGCGCAGGCAAAGTCGTGGCGGGCCCGAACGCAAAGATGTGTaGGTAATCAAGGAAGAGGTG +
Preference number: 4 (lower is better)
Translates to: RAGCRRRSGWRRQSRGGPERKDV*VIKEEV
Trigger: CACCTCTTCCTTGATTACTCACACATCTTTGCGTTC...GGGCCCGCCACGACTTTGCCTGCGCCAGCCTGATCTTCGTCTGCATCCTGCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673973.1
CDS-3UTR TCA 90 bp AGGGGCTGTGTCTCCACCCTCTCAGAGATAGTGCAGAGCGTCCCCCGAGCTGGGAAAGTAAGATACAGTTaGAGGACGGCAGGGGAGAAC +
Preference number: 4 (lower is better)
Translates to: RGCVSTLSEIVQSVPRAGKVRYS*RTAGEN
Trigger: GTTCTCCCCTGCCGTCCTTCAACTGTATCTTACTTT...CCCAGCTCGGGGGACGCTCTGCACTATCTCTGAGAGGGTGGAGACACAGCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000673973.1
CDS-3UTR GCA 90 bp AGAATACACCTGCCCTTCCTCGGGCTGATAAAGCCACACGACACAGCACAGGCAAGGCCTCACTCACTGTaGCGCCAGCATCCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: RIHLPFLGLIKPHDTAQARPHSL*RQHPPV
Trigger: CACAGGAGGATGCTGGCGGCACAGTGAGTGAGGCCT...TGCCTGTGCTGTGTCGTGTGGCTTTATCAGCCCGAGGAAGGGCAGGTGTATTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp CTTCTGGCCTCCCCTGCGCATTATGGCTCAGTGGCTGCTTCGAGCCAGAATCTGGGCCGCCTTTGTCCATaGGTCGAACACCAGCACATA +
Preference number: 4 (lower is better)
Translates to: LLASPAHYGSVAASSQNLGRLCP*VEHQHI
Trigger: TATGTGCTGGTGTTCGACGCATGGACAAAGGCGGCC...CAGATTCTGGCTCGAAGCAGCCACTGAGCCATAATGCGCAGGGGAGGCCAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp GAACAAAGATCTCAAAGTCAGCCCCGAACCAGTGAACATTCTCCAGCTGGCCTGAGGAAGAAGGGCACCTaGTCCCACGCACAGGCCGCC +
Preference number: 4 (lower is better)
Translates to: EQRSQSQPRTSEHSPAGLRKKGT*SHAQAA
Trigger: GGCGGCCTGTGCGTGGGAGCAGGTGCCCTTCTTCCT...CAGGCCAGCTGGAGAATGTTCACTGGTTCGGGGCTGACTTTGAGATCTTTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp GGGAGAGGGAGTCTCCAATCCGTGCTAGACAGCTCAGCTTACTCCCCCTTGGTGGCATCCTGCATTTGGTaGTTGTGGAAGGCGCCTGTC +
Preference number: 4 (lower is better)
Translates to: GRGSLQSVLDSSAYSPLVASCIW*LWKAPV
Trigger: GACAGGCGCCTTCCACAAGCACCAAATGCAGGATGC...CACCAAGGGGGAGTAAGCTGAGCTGTCTAGCACGGATTGGAGACTCCCTCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp AACGGCTCAGCATTTGTGAGGGGGCGGGCTTCCCAGATCCAGGAGCCTCTGCATTCCCGGGATGCATCCTaGATTTGGTGCTTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: NGSAFVRGRASQIQEPLHSRDAS*IWCLWK
Trigger: CTTCCACAAGCACCAAATGCAGGATGCATCCCGGGA...ATGCAGAGGCTCCTGGATCTGGGAAGCCCGCCCCCTCACAAATGCTGAGCCGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp CACCTGCCCTTCCTCGGGCTGATAAAGCCACACGACACAGCACAGGCAGACAGGGAAGAGGTCCCGGGATaGATCCTGCATTTGGTGCTT +
Preference number: 4 (lower is better)
Translates to: HLPFLGLIKPHDTAQADREEVPG*ILHLVL
Trigger: AAGCACCAAATGCAGGATGCATCCCGGGACCTCTTC...CCTGTCTGCCTGTGCTGTGTCGTGTGGCTTTATCAGCCCGAGGAAGGGCAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp AGGGCTCTTGTCTTGCTGCTCGCGGCCAGTAGGCCTGTCTCATTGCCAACAGGCGAAGAGGTCCCGGGATaGATCCTGCATTTGGTGCTT +
Preference number: 4 (lower is better)
Translates to: RALVLLLAASRPVSLPTGEEVPG*ILHLVL
Trigger: AAGCACCAAATGCAGGATGCATCCCGGGACCTCTTC...GCCTGTTGGCAATGAGACAGGCCTACTGGCCGCGAGCAGCAAGACAAGAGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR GCA 90 bp TCTAGAAAAACAGACCTCACTTGTGCGTGCCCACAGGCCACTGAGGTGGAAGTCGCTGGCGCTTCTCGATaGGCAGCTTCCGGCGGATCT +
Preference number: 4 (lower is better)
Translates to: SRKTDLTCACPQATEVEVAGASR*AASGGS
Trigger: AGATCCGCCGGAAGCTGCGCATCGAGAAGCGCCAGC...GACTTCCACCTCAGTGGCCTGTGGGCACGCACAAGTGAGGTCTGTTTTTCTAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp AGCTTCATTTACCAGAATGCCTCTGTGAGAAATGCTGTCATTGCCAGGCCCACCGTGGCCTCCGTGATGTaGACCCGGCCGGGTACTCCG +
Preference number: 4 (lower is better)
Translates to: SFIYQNASVRNAVIARPTVASVM*TRPGTP
Trigger: CGGAGTACCCGGCCGGGTGCACATCACGGAGGCCAC...GGTGGGCCTGGCAATGACAGCATTTCTCACAGAGGCATTCTGGTAAATGAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp GTGATGAGGCCACCGGTTAAGTCTTCCGGTTATGAAGTCCATTCAGAAAAAGTCCTGGGCGGGGGTGGCTaGTGGCTCCGGGGGTCGATG +
Preference number: 4 (lower is better)
Translates to: VMRPPVKSSGYEVHSEKVLGGGG*WLRGSM
Trigger: CATCGACCCCCGGAGCCAGCAGCCACCCCCGCCCAG...GACTTTTTCTGAATGGACTTCATAACCGGAAGACTTAACCGGTGGCCTCATCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp AACGGCTCAGCATTTGTGAGGGGGCGGGCTTCCCAGATCCAGGAGCCTCTGCATGTAGGCCTGTCTCATTaGCAACAGGCAGCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: NGSAFVRGRASQIQEPLHVGLSH*QQAALE
Trigger: TTCCAGAGCTGCCTGTTGGCAATGAGACAGGCCTAC...ATGCAGAGGCTCCTGGATCTGGGAAGCCCGCCCCCTCACAAATGCTGAGCCGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp TGCTCCCCGCCTTCTTGCTGTGACCACATTCCTCAGGACTCTATCCCCACAGCCGAGAAATGCTGTCATTaGCAGGCCCACCAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: CSPPSCCDHIPQDSIPTAEKCCH*QAHQGE
Trigger: CTCTCCCTGGTGGGCCTGGCAATGACAGCATTTCTC...GGCTGTGGGGATAGAGTCCTGAGGAATGTGGTCACAGCAAGAAGGCGGGGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp CAACATGCACAGCCATCTGCATGCCTTTGGGATTGGCGTGGGGCGGAGAGTCTTAAGGCAAGGCTCTGCTaGTCCCCGCCTTCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: QHAQPSACLWDWRGAESLKARLC*SPPSCC
Trigger: ACAGCAAGAAGGCGGGGAGCAGCAGAGCCTTGCCTT...AAGACTCTCCGCCCCACGCCAATCCCAAAGGCATGCAGATGGCTGTGCATGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp CACCTGCCCTTCCTCGGGCTGATAAAGCCACACGACACAGCACAGGCAGACAGGGCTTGCCTCACAAGCTaGCTCATTCAAAGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: HLPFLGLIKPHDTAQADRACLTS*LIQRQG
Trigger: GCCTTGCCTTTGAATGAGGCAGCTTGTGAGGCAAGC...CCTGTCTGCCTGTGCTGTGTCGTGTGGCTTTATCAGCCCGAGGAAGGGCAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp TCTAGAAAAACAGACCTCACTTGTGCGTGCCCACAGGCCACTGAGGTGGAAGTCGAAACCTTCCTGACTTaGCAGGAGAGCCCCCGCCGG +
Preference number: 4 (lower is better)
Translates to: SRKTDLTCACPQATEVEVETFLT*QESPRR
Trigger: CCGGCGGGGGCTCTCCTGGCAAGTCAGGAAGGTTTC...GACTTCCACCTCAGTGGCCTGTGGGCACGCACAAGTGAGGTCTGTTTTTCTAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp CTGTTTTCATCATGTGCTAAAGTTGCCTGCCTGGCACCTCAGGGAACAAAGATCGCAGGCAAGCAGGGCTaGGGAGAGGGCCTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LFSSCAKVACLAPQGTKIAGKQG*GEGLWA
Trigger: GGCCCAGAGGCCCTCTCCCCAGCCCTGCTTGCCTGC...GATCTTTGTTCCCTGAGGTGCCAGGCAGGCAACTTTAGCACATGATGAAAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp AGGCTCCTGTATGCAAGACTTTGTGTAGAACTTTACGGGGTTCATGGGGACACCGGAGGTGGGAGGCAGTaGAGACGGCCCCAACGGCGA +
Preference number: 4 (lower is better)
Translates to: RLLYARLCVELYGVHGDTGGGRQ*RRPQRR
Trigger: TCGCCGTTGGGGCCGTCTCCACTGCCTCCCACCTCC...GGTGTCCCCATGAACCCCGTAAAGTTCTACACAAAGTCTTGCATACAGGAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp AGCTTCATTTACCAGAATGCCTCTGTGAGAAATGCTGTCATTGCCAGGCCCACCGGAGGTGGGAGGCAGTaGAGACGGCCCCAACGGCGA +
Preference number: 4 (lower is better)
Translates to: SFIYQNASVRNAVIARPTGGGRQ*RRPQRR
Trigger: TCGCCGTTGGGGCCGTCTCCACTGCCTCCCACCTCC...GGTGGGCCTGGCAATGACAGCATTTCTCACAGAGGCATTCTGGTAAATGAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp AACGGCTCAGCATTTGTGAGGGGGCGGGCTTCCCAGATCCAGGAGCCTCTGCATGATGCATCCTGCATTTaGTGCTTGTGGAAGGCGCCT +
Preference number: 4 (lower is better)
Translates to: NGSAFVRGRASQIQEPLHDASCI*CLWKAP
Trigger: AGGCGCCTTCCACAAGCACCAAATGCAGGATGCATC...ATGCAGAGGCTCCTGGATCTGGGAAGCCCGCCCCCTCACAAATGCTGAGCCGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp AGAATACACCTGCCCTTCCTCGGGCTGATAAAGCCACACGACACAGCACAGGCAAGCAGGTTCTCCTGCTaGCGCTTCTCGATGCGCAGC +
Preference number: 4 (lower is better)
Translates to: RIHLPFLGLIKPHDTAQASRFSC*RFSMRS
Trigger: GCTGCGCATCGAGAAGCGCCAGCAGGAGAACCTGCT...TGCCTGTGCTGTGTCGTGTGGCTTTATCAGCCCGAGGAAGGGCAGGTGTATTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp CACCTTACTTTCAAAGCACCTCTCTCCAGAATGCTTGCCTCACAAGCTGCCTCAACGCAGTTCCGGGCGTaGGTAGGCAGCGACACGGGC +
Preference number: 4 (lower is better)
Translates to: HLTFKAPLSRMLASQAASTQFRA*VGSDTG
Trigger: GCCCGTGTCGCTGCCTACCCACGCCCGGAACTGCGT...TGAGGCAGCTTGTGAGGCAAGCATTCTGGAGAGAGGTGCTTTGAAAGTAAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp TTCTATGTTATATTAGCAACAGAAACCTTCCTGACTTGCCAGGAGAGCCCCCGCTGGGGAGGTGTTGGCTaGGCGGGGGTGGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: FYVILATETFLTCQESPRWGGVG*AGVAAG
Trigger: GCCAGCAGCCACCCCCGCCCAGCCAACACCTCCCCA...GCGGGGGCTCTCCTGGCAAGTCAGGAAGGTTTCTGTTGCTAATATAACATAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp CCTTACTTTCAAAGCACCTCTCTCCAGAATGCTTGCCTCACAAGCTGCCTCATTCGTCCCCCTTGGGCCTaGGGAGGTGTTGGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: PYFQSTSLQNACLTSCLIRPPWA*GGVGWA
Trigger: CGCCCAGCCAACACCTCCCCAGGCCCAAGGGGGACG...AATGAGGCAGCTTGTGAGGCAAGCATTCTGGAGAGAGGTGCTTTGAAAGTAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp CTTCTGGCCTCCCCTGCGCATTATGGCTCAGTGGCTGCTTCGAGCCAGAATCTGCTCACGCTCTCACGGTaGTTGAGATGTGCAAAGGGC +
Preference number: 4 (lower is better)
Translates to: LLASPAHYGSVAASSQNLLTLSR*LRCAKG
Trigger: GCCCTTTGCACATCTCAACCACCGTGAGAGCGTGAG...CAGATTCTGGCTCGAAGCAGCCACTGAGCCATAATGCGCAGGGGAGGCCAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp CACACCCAGTGCCGCCGTCCTGGGCATGAGCAGGACATGGACGAGCAGGATGCACCTTCTCCAGGAAGATaGACCCAAAGGTGTAGAAGT +
Preference number: 4 (lower is better)
Translates to: HTQCRRPGHEQDMDEQDAPSPGR*TQRCRS
Trigger: ACTTCTACACCTTTGGGTCCATCTTCCTGGAGAAGG...TGCATCCTGCTCGTCCATGTCCTGCTCATGCCCAGGACGGCGGCACTGGGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp GCTCTTGTCTTGCTGCTCGCGGCCAGTAGGCCTGTCTCATTGCCAACAGGCAGCGCCAACAGGCAGCTCTaGAACTTGGAAAGGCATCAG +
Preference number: 4 (lower is better)
Translates to: ALVLLLAASRPVSLPTGSANRQL*NLERHQ
Trigger: CTGATGCCTTTCCAAGTTCCAGAGCTGCCTGTTGGC...GCTGCCTGTTGGCAATGAGACAGGCCTACTGGCCGCGAGCAGCAAGACAAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp AGCAACAGAAACCTTCCTGACTTGCCAGGAGAGCCCCCGCCGGGCAGCCCTGGTGTCTCCTCGGTAACCTaGATTTTCCCAAGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: SNRNLPDLPGEPPPGSPGVSSVT*IFPSSP
Trigger: TGGAGAACTTGGGAAAATCCAGGTTACCGAGGAGAC...ACCAGGGCTGCCCGGCGGGGGCTCTCCTGGCAAGTCAGGAAGGTTTCTGTTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp TGCTCCCCGCCTTCTTGCTGTGACCACATTCCTCAGGACTCTATCCCCACAGCCTTCAGGGAAGGAGACTaGCTTCCCGGCCTTTTCGGA +
Preference number: 4 (lower is better)
Translates to: CSPPSCCDHIPQDSIPTAFREGD*LPGLFG
Trigger: TCCGAAAAGGCCGGGAAGCCAGTCTCCTTCCCTGAA...GGCTGTGGGGATAGAGTCCTGAGGAATGTGGTCACAGCAAGAAGGCGGGGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp ATGGGTGCCAGGCGGTACTCGCGCTCAAAGCCCTTCTCCAGGAAGATGGACCCACGCATTATGGCTCAGTaGCTGCTTCGAGCCAGAATC +
Preference number: 4 (lower is better)
Translates to: MGARRYSRSKPFSRKMDPRIMAQ*LLRARI
Trigger: GATTCTGGCTCGAAGCAGCCACTGAGCCATAATGCG...TGGGTCCATCTTCCTGGAGAAGGGCTTTGAGCGCGAGTACCGCCTGGCACCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673973.1
CDS-3UTR CCA 90 bp GAATGCCTCTGTGAGAAATGCTGTCATTGCCAGGCCCACCAGGGAGAGGGAGTCCTCCCCTGCGCATTATaGCTCAGTGGCTGCTTCGAG +
Preference number: 4 (lower is better)
Translates to: ECLCEKCCHCQAHQGEGVLPCAL*LSGCFE
Trigger: CTCGAAGCAGCCACTGAGCCATAATGCGCAGGGGAG...GACTCCCTCTCCCTGGTGGGCCTGGCAATGACAGCATTTCTCACAGAGGCATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp CAGGTTGATGATGGCCACAGTGAGCAGGCTGCCGATGGTCAGGACGGCCAGGGTATTCTCCAGCTGGCCTaGAAACTGTTACAGACCAGG +
Preference number: 4 (lower is better)
Translates to: QVDDGHSEQAADGQDGQGILQLA*KLLQTR
Trigger: CCTGGTCTGTAACAGTTTCCAGGCCAGCTGGAGAAT...ACCCTGGCCGTCCTGACCATCGGCAGCCTGCTCACTGTGGCCATCATCAACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673973.1
3UTR CAA 72 bp AAGCCAACATGCACAGCCATCTGCATGCCTTTGGGATaGGCGTGGGGCGGAGAGTCTTCTCCTGGGCTTGCT +
Preference number: 4 (lower is better)
Translates to: KPTCTAICMPLG*AWGGESSPGLA
Trigger: AGCAAGCCCAGGAGAAGACTCTCCGCCCCACGCCAATCCCAAAGGCATGCAGATGGCTGTGCATGTTGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp AGGGCTCTTGTCTTGCTGCTCGCGGCCAGTAGGCCTGTCTCATTGCCAACAGGCACACCACGAAGACAATaGACAGGAAGAAGGGCACCT +
Preference number: 4 (lower is better)
Translates to: RALVLLLAASRPVSLPTGTPRRQ*TGRRAP
Trigger: AGGTGCCCTTCTTCCTGTTCATTGTCTTCGTGGTGT...GCCTGTTGGCAATGAGACAGGCCTACTGGCCGCGAGCAGCAAGACAAGAGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR TCA 90 bp GGGAGAGGGAGTCTCCAATCCGTGCTAGACAGCTCAGCTTACTCCCCCTTGGTGACTTCACAGTGTAGGTaGAGAGGTCCCGGGATGCAT +
Preference number: 4 (lower is better)
Translates to: GRGSLQSVLDSSAYSPLVTSQCR*RGPGMH
Trigger: ATGCATCCCGGGACCTCTTCACCTACACTGTGAAGT...CACCAAGGGGGAGTAAGCTGAGCTGTCTAGCACGGATTGGAGACTCCCTCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp CTCCAATCCGTGCTAGACAGCTCAGCTTACTCCCCCTTGGTGTCTAGAAAAACATTAGCGTGGCCTCCGTaGTGTGCACCCGGCCGGGTA +
Preference number: 4 (lower is better)
Translates to: LQSVLDSSAYSPLVSRKTLAWPP*CAPGRV
Trigger: TACCCGGCCGGGTGCACATCACGGAGGCCACGCTAA...TGTTTTTCTAGACACCAAGGGGGAGTAAGCTGAGCTGTCTAGCACGGATTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp GTCTTGCTGCTCGCGGCCAGTAGGCCTGTCTCATTGCCAACAGGCAGCTCTGGACCTCGTGCTCCTTCTTaGACTTCTTCTTCCATAGGC +
Preference number: 4 (lower is better)
Translates to: VLLLAASRPVSLPTGSSGPRAPS*TSSSIG
Trigger: GCCTATGGAAGAAGAAGTTCAAGAAGGAGCACGAGG...TCCAGAGCTGCCTGTTGGCAATGAGACAGGCCTACTGGCCGCGAGCAGCAAGAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673973.1
CDS-3UTR TCA 90 bp GGGAGAGGGAGTCTCCAATCCGTGCTAGACAGCTCAGCTTACTCCCCCTTGGTGCTGTGTAGAACACTTTaGAGTCCGGCACGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: GRGSLQSVLDSSAYSPLVLCRTL*SPARRQ
Trigger: TTGCCTCCGTGCCGGACTTCAAAGTGTTCTACACAG...CACCAAGGGGGAGTAAGCTGAGCTGTCTAGCACGGATTGGAGACTCCCTCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp CTTCTGGCCTCCCCTGCGCATTATGGCTCAGTGGCTGCTTCGAGCCAGAATCTGTCTGGTGCATGTGTCTaGGAAATCCTCCAGTGCAGG +
Preference number: 4 (lower is better)
Translates to: LLASPAHYGSVAASSQNLSGACV*EILQCR
Trigger: CCTGCACTGGAGGATTTCTCAGACACATGCACCAGA...CAGATTCTGGCTCGAAGCAGCCACTGAGCCATAATGCGCAGGGGAGGCCAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp ACTCATCCCAGGACCCCAACAAGTCTGGTCAGTCACCCAATCTGCAACCCTGTAAGGCCTCACTCACTGTaGCGCCAGCATCCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: THPRTPTSLVSHPICNPVRPHSL*RQHPPV
Trigger: CACAGGAGGATGCTGGCGGCACAGTGAGTGAGGCCT...TACAGGGTTGCAGATTGGGTGACTGACCAGACTTGTTGGGGTCCTGGGATGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp GAATGCCTCTGTGAGAAATGCTGTCATTGCCAGGCCCACCAGGGAGAGGGAGTCGCATCCTGCATTTGGTaGTTGTGGAAGGCGCCTGTC +
Preference number: 4 (lower is better)
Translates to: ECLCEKCCHCQAHQGEGVASCIW*LWKAPV
Trigger: GACAGGCGCCTTCCACAAGCACCAAATGCAGGATGC...GACTCCCTCTCCCTGGTGGGCCTGGCAATGACAGCATTTCTCACAGAGGCATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp GGACATGGACGAGCAGGATGCAGACGAAGATCAGGCTGGCGCAGGCAAAGTCGTTCCCGGGATGCATCCTaGATTTGGTGCTTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: GHGRAGCRRRSGWRRQSRSRDAS*IWCLWK
Trigger: CTTCCACAAGCACCAAATGCAGGATGCATCCCGGGA...ACGACTTTGCCTGCGCCAGCCTGATCTTCGTCTGCATCCTGCTCGTCCATGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR GCA 90 bp AGAATACACCTGCCCTTCCTCGGGCTGATAAAGCCACACGACACAGCACAGGCACAGCGACGGTCACCATaGTCCTTGAGCCGTTCGATG +
Preference number: 4 (lower is better)
Translates to: RIHLPFLGLIKPHDTAQAQRRSP*SLSRSM
Trigger: CATCGAACGGCTCAAGGAGCATGGTGACCGTCGCTG...TGCCTGTGCTGTGTCGTGTGGCTTTATCAGCCCGAGGAAGGGCAGGTGTATTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp GGGAGAGGGAGTCTCCAATCCGTGCTAGACAGCTCAGCTTACTCCCCCTTGGTGAGTTGTTGTCAGGCATaGAGCGACGGTCACCATGCT +
Preference number: 4 (lower is better)
Translates to: GRGSLQSVLDSSAYSPLVSCCQA*SDGHHA
Trigger: AGCATGGTGACCGTCGCTGCATGCCTGACAACAACT...CACCAAGGGGGAGTAAGCTGAGCTGTCTAGCACGGATTGGAGACTCCCTCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp AACCTGGCTTTTTGCATTTGCCTTGACTCACGCAGTTTCAGAGCAAGAACGGCTGCCGGGTACTCCGGCTaGCTCCATCCGGTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: NLAFCICLDSRSFRARTAAGYSG*LHPVGQ
Trigger: CTGGCCAACCGGATGGAGGCAGCCGGAGTACCCGGC...AGCCGTTCTTGCTCTGAAACTGCGTGAGTCAAGGCAAATGCAAAAAGCCAGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp GCTCCTGTATGCAAGACTTTGTGTAGAACTTTACGGGGTTCATGGGGACACCTAGTGGCCTCCGTGATGTaGACCCGGCCGGGTACTCCG +
Preference number: 4 (lower is better)
Translates to: APVCKTLCRTLRGSWGHLVASVM*TRPGTP
Trigger: CGGAGTACCCGGCCGGGTGCACATCACGGAGGCCAC...TAGGTGTCCCCATGAACCCCGTAAAGTTCTACACAAAGTCTTGCATACAGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp GAACAAAGATCTCAAAGTCAGCCCCGAACCAGTGAACATTCTCCAGCTGGCCTGACGGTGGTTGAGATGTaGAAAGGGCCGTGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: EQRSQSQPRTSEHSPAGLTVVEM*KGPCRP
Trigger: GGGGCGGCACGGCCCTTTGCACATCTCAACCACCGT...CAGGCCAGCTGGAGAATGTTCACTGGTTCGGGGCTGACTTTGAGATCTTTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp ACTCATCCCAGGACCCCAACAAGTCTGGTCAGTCACCCAATCTGCAACCCTGTACGTGGGTCTCACCACTaGTCACGCTCTCACGGTGGT +
Preference number: 4 (lower is better)
Translates to: THPRTPTSLVSHPICNPVRGSHH*SRSHGG
Trigger: ACCACCGTGAGAGCGTGAGCAGTGGTGAGACCCACG...TACAGGGTTGCAGATTGGGTGACTGACCAGACTTGTTGGGGTCCTGGGATGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
CDS-3UTR GCA 90 bp AGAAGCCAACATGCACAGCCATCTGCATGCCTTTGGGATTGGCGTGGGGCGGAGGTAGGCCTGTCTCATTaGCAACAGGCAGCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: RSQHAQPSACLWDWRGAEVGLSH*QQAALE
Trigger: TTCCAGAGCTGCCTGTTGGCAATGAGACAGGCCTAC...CTCCGCCCCACGCCAATCCCAAAGGCATGCAGATGGCTGTGCATGTTGGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp GTGTCTAGAAAAACAGACCTCACTTGTGCGTGCCCACAGGCCACTGAGGTGGAAACAGGGCTCTTGTCTTaGTGCTCGCGGCCAGTAGGC +
Preference number: 4 (lower is better)
Translates to: VSRKTDLTCACPQATEVETGLLS*CSRPVG
Trigger: GCCTACTGGCCGCGAGCAGCAAGACAAGAGCCCTGT...TTCCACCTCAGTGGCCTGTGGGCACGCACAAGTGAGGTCTGTTTTTCTAGACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp GAACAAAGATCTCAAAGTCAGCCCCGAACCAGTGAACATTCTCCAGCTGGCCTGGGCGACGCTGAGCCCTaGAGCTGCCATGTACGTGCT +
Preference number: 4 (lower is better)
Translates to: EQRSQSQPRTSEHSPAGLGDAEP*SCHVRA
Trigger: AGCACGTACATGGCAGCTGCAGGGCTCAGCGTCGCC...CAGGCCAGCTGGAGAATGTTCACTGGTTCGGGGCTGACTTTGAGATCTTTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp AGAAGCCAACATGCACAGCCATCTGCATGCCTTTGGGATTGGCGTGGGGCGGAGTCCCAAGTTCTCCAGTaGTTTCCATTCGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: RSQHAQPSACLWDWRGAESQVLQ*FPFGWP
Trigger: TGGCCAGCCGAATGGAAAGCACTGGAGAACTTGGGA...CTCCGCCCCACGCCAATCCCAAAGGCATGCAGATGGCTGTGCATGTTGGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp GAGCAGGACATGGACGAGCAGGATGCAGACGAAGATCAGGCTGGCGCAGGCAAATCCCAAGTTCTCCAGTaGTTTCCATTCGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: EQDMDEQDADEDQAGAGKSQVLQ*FPFGWP
Trigger: TGGCCAGCCGAATGGAAAGCACTGGAGAACTTGGGA...TTTGCCTGCGCCAGCCTGATCTTCGTCTGCATCCTGCTCGTCCATGTCCTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673973.1
CDS-3UTR GCA 90 bp TTAATTTGCAGCCCGGGGCAACTCATCCCAGGACCCCAACAAGTCTGGTCAGTCGCACAGCCATCTGCATaGCTTTGGGATTGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: LICSPGQLIPGPQQVWSVAQPSA*LWDWRG
Trigger: CCCACGCCAATCCCAAAGGCATGCAGATGGCTGTGC...GACTGACCAGACTTGTTGGGGTCCTGGGATGAGTTGCCCCGGGCTGCAAATTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp TCTAGAAAAACAGACCTCACTTGTGCGTGCCCACAGGCCACTGAGGTGGAAGTCGACCTCACTTGTGCGTaGCCACAGGCCACTGAGGTG +
Preference number: 4 (lower is better)
Translates to: SRKTDLTCACPQATEVEVDLTCA*PQATEV
Trigger: CACCTCAGTGGCCTGTGGGCACGCACAAGTGAGGTC...GACTTCCACCTCAGTGGCCTGTGGGCACGCACAAGTGAGGTCTGTTTTTCTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp ACTCATCCCAGGACCCCAACAAGTCTGGTCAGTCACCCAATCTGCAACCCTGTAGACCTCACTTGTGCGTaGCCACAGGCCACTGAGGTG +
Preference number: 4 (lower is better)
Translates to: THPRTPTSLVSHPICNPVDLTCA*PQATEV
Trigger: CACCTCAGTGGCCTGTGGGCACGCACAAGTGAGGTC...TACAGGGTTGCAGATTGGGTGACTGACCAGACTTGTTGGGGTCCTGGGATGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp GTTTCAGAGCAAGAACGGCTCAGCATTTGTGAGGGGGCGGGCTTCCCAGATCCATGCTCCCCGCCTTCTTaGTGTGACCACATTCCTCAG +
Preference number: 4 (lower is better)
Translates to: VSEQERLSICEGAGFPDPCSPPS*CDHIPQ
Trigger: CTGAGGAATGTGGTCACAGCAAGAAGGCGGGGAGCA...TGGATCTGGGAAGCCCGCCCCCTCACAAATGCTGAGCCGTTCTTGCTCTGAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp AGAAGCCAACATGCACAGCCATCTGCATGCCTTTGGGATTGGCGTGGGGCGGAGCACCTCTCTCCAGAATaGTTGCCTCACAAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: RSQHAQPSACLWDWRGAEHLSPE*LPHKLP
Trigger: AGGCAGCTTGTGAGGCAAGCATTCTGGAGAGAGGTG...CTCCGCCCCACGCCAATCCCAAAGGCATGCAGATGGCTGTGCATGTTGGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp AACGGCTCAGCATTTGTGAGGGGGCGGGCTTCCCAGATCCAGGAGCCTCTGCATGCTGTACTCTTAATTTaGAGCCCGGGGCAACTCATC +
Preference number: 4 (lower is better)
Translates to: NGSAFVRGRASQIQEPLHAVLLI*SPGQLI
Trigger: GATGAGTTGCCCCGGGCTGCAAATTAAGAGTACAGC...ATGCAGAGGCTCCTGGATCTGGGAAGCCCGCCCCCTCACAAATGCTGAGCCGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp AGAATACACCTGCCCTTCCTCGGGCTGATAAAGCCACACGACACAGCACAGGCACCTGTGCATCCAGACTaGGCTGACTCCACACGCAGT +
Preference number: 4 (lower is better)
Translates to: RIHLPFLGLIKPHDTAQAPVHPD*ADSTRS
Trigger: ACTGCGTGTGGAGTCAGCCCAGTCTGGATGCACAGG...TGCCTGTGCTGTGTCGTGTGGCTTTATCAGCCCGAGGAAGGGCAGGTGTATTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp GTGTCTAGAAAAACAGACCTCACTTGTGCGTGCCCACAGGCCACTGAGGTGGAAACGCCATGCCCAGAATaGCCTGGTGTCTGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: VSRKTDLTCACPQATEVETPCPE*PGVWRG
Trigger: ACCCCTCCAGACACCAGGCCATTCTGGGCATGGCGT...TTCCACCTCAGTGGCCTGTGGGCACGCACAAGTGAGGTCTGTTTTTCTAGACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp TGCTCCCCGCCTTCTTGCTGTGACCACATTCCTCAGGACTCTATCCCCACAGCCTGCATTTGGTGCTTGTaGAAGGCGCCTGTCAGGTTC +
Preference number: 4 (lower is better)
Translates to: CSPPSCCDHIPQDSIPTACIWCL*KAPVRF
Trigger: GAACCTGACAGGCGCCTTCCACAAGCACCAAATGCA...GGCTGTGGGGATAGAGTCCTGAGGAATGTGGTCACAGCAAGAAGGCGGGGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp ACAGGGCTCTTGTCTTGCTGCTCGCGGCCAGTAGGCCTGTCTCATTGCCAACAGTGCATTTGGTGCTTGTaGAAGGCGCCTGTCAGGTTC +
Preference number: 4 (lower is better)
Translates to: TGLLSCCSRPVGLSHCQQCIWCL*KAPVRF
Trigger: GAACCTGACAGGCGCCTTCCACAAGCACCAAATGCA...CTGTTGGCAATGAGACAGGCCTACTGGCCGCGAGCAGCAAGACAAGAGCCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537579.5
ENST00000567277.6
ENST00000673973.1
CDS-3UTR CCA 90 bp GTGTCTAGAAAAACAGACCTCACTTGTGCGTGCCCACAGGCCACTGAGGTGGAAAGCAGGTTCTCCTGCTaGCGCTTCTCGATGCGCAGC +
Preference number: 4 (lower is better)
Translates to: VSRKTDLTCACPQATEVESRFSC*RFSMRS
Trigger: GCTGCGCATCGAGAAGCGCCAGCAGGAGAACCTGCT...TTCCACCTCAGTGGCCTGTGGGCACGCACAAGTGAGGTCTGTTTTTCTAGACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp AGAATACACCTGCCCTTCCTCGGGCTGATAAAGCCACACGACACAGCACAGGCACCAGCTTCATGCCCATaGAGATGTGGGCCGGAAGCA +
Preference number: 4 (lower is better)
Translates to: RIHLPFLGLIKPHDTAQAPASCP*RCGPEA
Trigger: TGCTTCCGGCCCACATCTCCATGGGCATGAAGCTGG...TGCCTGTGCTGTGTCGTGTGGCTTTATCAGCCCGAGGAAGGGCAGGTGTATTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp CTCCAATCCGTGCTAGACAGCTCAGCTTACTCCCCCTTGGTGTCTAGAAAAACATCTGGGGTCCGGCGGTaGCGCTGGGGAACGCTCTTA +
Preference number: 4 (lower is better)
Translates to: LQSVLDSSAYSPLVSRKTSGVRR*RWGTLL
Trigger: TAAGAGCGTTCCCCAGCGCCACCGCCGGACCCCAGA...TGTTTTTCTAGACACCAAGGGGGAGTAAGCTGAGCTGTCTAGCACGGATTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
CDS-3UTR CCA 90 bp GAATGCCTCTGTGAGAAATGCTGTCATTGCCAGGCCCACCAGGGAGAGGGAGTCACCTCGAGAACTTGGTaGCAAAGCACAGGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: ECLCEKCCHCQAHQGEGVTSRTW*QSTGPA
Trigger: TGCTGGGCCTGTGCTTTGCCACCAAGTTCTCGAGGT...GACTCCCTCTCCCTGGTGGGCCTGGCAATGACAGCATTTCTCACAGAGGCATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp AGAACTTGGTGGCAAAGCACAGGCCCAGCACCAGCCCCAGTACACAGGCCACCAGGTTCACGTTCTCCATaGTCTCAAACTCCTCGTGCT +
Preference number: 4 (lower is better)
Translates to: RTWWQSTGPAPAPVHRPPGSRSP*SQTPRA
Trigger: AGCACGAGGAGTTTGAGACCATGGAGAACGTGAACC...TGGTGGCCTGTGTACTGGGGCTGGTGCTGGGCCTGTGCTTTGCCACCAAGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673973.1
CDS-3UTR CCA 90 bp AGGCTCCTGTATGCAAGACTTTGTGTAGAACTTTACGGGGTTCATGGGGACACCTGCCGCTCCAGCTCCTaGTTCTCGTGCCCTGAGGCG +
Preference number: 4 (lower is better)
Translates to: RLLYARLCVELYGVHGDTCRSSS*FSCPEA
Trigger: CGCCTCAGGGCACGAGAACCAGGAGCTGGAGCGGCA...GGTGTCCCCATGAACCCCGTAAAGTTCTACACAAAGTCTTGCATACAGGAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp TTAATTTGCAGCCCGGGGCAACTCATCCCAGGACCCCAACAAGTCTGGTCAGTCGCAATCACAGGCCCATaGTTTATGCCGACGCGGAGG +
Preference number: 4 (lower is better)
Translates to: LICSPGQLIPGPQQVWSVAITGP*FMPTRR
Trigger: CCTCCGCGTCGGCATAAACCATGGGCCTGTGATTGC...GACTGACCAGACTTGTTGGGGTCCTGGGATGAGTTGCCCCGGGCTGCAAATTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp TGCTCCCCGCCTTCTTGCTGTGACCACATTCCTCAGGACTCTATCCCCACAGCCCCAGCCCCTGAAACTTaGCAGTGTCCGTACAGACAA +
Preference number: 4 (lower is better)
Translates to: CSPPSCCDHIPQDSIPTAPAPET*QCPYRQ
Trigger: TTGTCTGTACGGACACTGCCAAGTTTCAGGGGCTGG...GGCTGTGGGGATAGAGTCCTGAGGAATGTGGTCACAGCAAGAAGGCGGGGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp AGCAACAGAAACCTTCCTGACTTGCCAGGAGAGCCCCCGCCGGGCAGCCCTGGTCTTCGAGCCAGAATCTaGTGCATGTGTCTGAGAAAT +
Preference number: 4 (lower is better)
Translates to: SNRNLPDLPGEPPPGSPGLRARI*CMCLRN
Trigger: ATTTCTCAGACACATGCACCAGATTCTGGCTCGAAG...ACCAGGGCTGCCCGGCGGGGGCTCTCCTGGCAAGTCAGGAAGGTTTCTGTTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp CTTCTGGCCTCCCCTGCGCATTATGGCTCAGTGGCTGCTTCGAGCCAGAATCTGCGCATTATGGCTCAGTaGCTGCTTCGAGCCAGAATC +
Preference number: 4 (lower is better)
Translates to: LLASPAHYGSVAASSQNLRIMAQ*LLRARI
Trigger: GATTCTGGCTCGAAGCAGCCACTGAGCCATAATGCG...CAGATTCTGGCTCGAAGCAGCCACTGAGCCATAATGCGCAGGGGAGGCCAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp AGAATACACCTGCCCTTCCTCGGGCTGATAAAGCCACACGACACAGCACAGGCACTCCCCTGCGCATTATaGCTCAGTGGCTGCTTCGAG +
Preference number: 4 (lower is better)
Translates to: RIHLPFLGLIKPHDTAQALPCAL*LSGCFE
Trigger: CTCGAAGCAGCCACTGAGCCATAATGCGCAGGGGAG...TGCCTGTGCTGTGTCGTGTGGCTTTATCAGCCCGAGGAAGGGCAGGTGTATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp CACCTGCCCTTCCTCGGGCTGATAAAGCCACACGACACAGCACAGGCAGACAGGATTCTCCAGCTGGCCTaGAAACTGTTACAGACCAGG +
Preference number: 4 (lower is better)
Translates to: HLPFLGLIKPHDTAQADRILQLA*KLLQTR
Trigger: CCTGGTCTGTAACAGTTTCCAGGCCAGCTGGAGAAT...CCTGTCTGCCTGTGCTGTGTCGTGTGGCTTTATCAGCCCGAGGAAGGGCAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp CTTCTGGCCTCCCCTGCGCATTATGGCTCAGTGGCTGCTTCGAGCCAGAATCTGGGACCCCAACAAGTCTaGTCAGTCACCCAATCTGCA +
Preference number: 4 (lower is better)
Translates to: LLASPAHYGSVAASSQNLGPQQV*SVTQSA
Trigger: TGCAGATTGGGTGACTGACCAGACTTGTTGGGGTCC...CAGATTCTGGCTCGAAGCAGCCACTGAGCCATAATGCGCAGGGGAGGCCAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp TGCTCCCCGCCTTCTTGCTGTGACCACATTCCTCAGGACTCTATCCCCACAGCCGGACCCCAACAAGTCTaGTCAGTCACCCAATCTGCA +
Preference number: 4 (lower is better)
Translates to: CSPPSCCDHIPQDSIPTAGPQQV*SVTQSA
Trigger: TGCAGATTGGGTGACTGACCAGACTTGTTGGGGTCC...GGCTGTGGGGATAGAGTCCTGAGGAATGTGGTCACAGCAAGAAGGCGGGGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp ACTCATCCCAGGACCCCAACAAGTCTGGTCAGTCACCCAATCTGCAACCCTGTAGCCCATGCTGGCTGGTaGGCTGGTACTTCTCGTAGA +
Preference number: 4 (lower is better)
Translates to: THPRTPTSLVSHPICNPVAHAGW*AGTSRR
Trigger: TCTACGAGAAGTACCAGCTCACCAGCCAGCATGGGC...TACAGGGTTGCAGATTGGGTGACTGACCAGACTTGTTGGGGTCCTGGGATGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp GTGTCTAGAAAAACAGACCTCACTTGTGCGTGCCCACAGGCCACTGAGGTGGAATCCCACACAGGAAGATaGCTGCGTTGGCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: VSRKTDLTCACPQATEVESHTGR*LRWPAA
Trigger: AGCTGCTGGCCAACGCAGTCATCTTCCTGTGTGGGA...TTCCACCTCAGTGGCCTGTGGGCACGCACAAGTGAGGTCTGTTTTTCTAGACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp GTTTCAGAGCAAGAACGGCTCAGCATTTGTGAGGGGGCGGGCTTCCCAGATCCAACTTCACAGTGTAGGTaGAGAGGTCCCGGGATGCAT +
Preference number: 4 (lower is better)
Translates to: VSEQERLSICEGAGFPDPTSQCR*RGPGMH
Trigger: ATGCATCCCGGGACCTCTTCACCTACACTGTGAAGT...TGGATCTGGGAAGCCCGCCCCCTCACAAATGCTGAGCCGTTCTTGCTCTGAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp GTGTCTAGAAAAACAGACCTCACTTGTGCGTGCCCACAGGCCACTGAGGTGGAAGGATGTTCATCTCCTTaGGGTAGGGGTCCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: VSRKTDLTCACPQATEVEGCSSP*GRGPAA
Trigger: AGCAGCGGGACCCCTACCTCAAGGAGATGAACATCC...TTCCACCTCAGTGGCCTGTGGGCACGCACAAGTGAGGTCTGTTTTTCTAGACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp GCTCCTGTATGCAAGACTTTGTGTAGAACTTTACGGGGTTCATGGGGACACCTAGGCTCCGGGGGTCGATaGCCAGGTAGGTGCGGATGT +
Preference number: 4 (lower is better)
Translates to: APVCKTLCRTLRGSWGHLGSGGR*PGRCGC
Trigger: ACATCCGCACCTACCTGGTCATCGACCCCCGGAGCC...TAGGTGTCCCCATGAACCCCGTAAAGTTCTACACAAAGTCTTGCATACAGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp AACCTGGCTTTTTGCATTTGCCTTGACTCACGCAGTTTCAGAGCAAGAACGGCTGGCTCCGGGGGTCGATaGCCAGGTAGGTGCGGATGT +
Preference number: 4 (lower is better)
Translates to: NLAFCICLDSRSFRARTAGSGGR*PGRCGC
Trigger: ACATCCGCACCTACCTGGTCATCGACCCCCGGAGCC...AGCCGTTCTTGCTCTGAAACTGCGTGAGTCAAGGCAAATGCAAAAAGCCAGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp TTAATTTGCAGCCCGGGGCAACTCATCCCAGGACCCCAACAAGTCTGGTCAGTCGAGCCCCTCAATGGCTaGCAGCATCTCGTCATCGTA +
Preference number: 4 (lower is better)
Translates to: LICSPGQLIPGPQQVWSVEPLNG*QHLVIV
Trigger: TACGATGACGAGATGCTGTCAGCCATTGAGGGGCTC...GACTGACCAGACTTGTTGGGGTCCTGGGATGAGTTGCCCCGGGCTGCAAATTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp GAATGCCTCTGTGAGAAATGCTGTCATTGCCAGGCCCACCAGGGAGAGGGAGTCCTGTGTAGAACACTTTaGAGTCCGGCACGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: ECLCEKCCHCQAHQGEGVLCRTL*SPARRQ
Trigger: TTGCCTCCGTGCCGGACTTCAAAGTGTTCTACACAG...GACTCCCTCTCCCTGGTGGGCCTGGCAATGACAGCATTTCTCACAGAGGCATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp CTTCTGGCCTCCCCTGCGCATTATGGCTCAGTGGCTGCTTCGAGCCAGAATCTGCCAGCCCTTCTTTGTTaGCATCGCACTCTGTGTAGA +
Preference number: 4 (lower is better)
Translates to: LLASPAHYGSVAASSQNLPALLC*HRTLCR
Trigger: TCTACACAGAGTGCGATGTCAACAAAGAAGGGCTGG...CAGATTCTGGCTCGAAGCAGCCACTGAGCCATAATGCGCAGGGGAGGCCAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp TACTTTCAAAGCACCTCTCTCCAGAATGCTTGCCTCACAAGCTGCCTCATTCAAGCCCTGAGGCGACGCTaGGCCCTGCAGCTGCCATGT +
Preference number: 4 (lower is better)
Translates to: YFQSTSLQNACLTSCLIQALRRR*ALQLPC
Trigger: ACATGGCAGCTGCAGGGCTCAGCGTCGCCTCAGGGC...TTGAATGAGGCAGCTTGTGAGGCAAGCATTCTGGAGAGAGGTGCTTTGAAAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp TGTAGAACTTTACGGGGTTCATGGGGACACCTAGCTAAGAATCCCTGCTATGTAGCCCTGAGGCGACGCTaGGCCCTGCAGCTGCCATGT +
Preference number: 4 (lower is better)
Translates to: CRTLRGSWGHLAKNPCYVALRRR*ALQLPC
Trigger: ACATGGCAGCTGCAGGGCTCAGCGTCGCCTCAGGGC...TACATAGCAGGGATTCTTAGCTAGGTGTCCCCATGAACCCCGTAAAGTTCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp CAACATGCACAGCCATCTGCATGCCTTTGGGATTGGCGTGGGGCGGAGAGTCTTTCTGGTGCATGTGTCTaGGAAATCCTCCAGTGCAGG +
Preference number: 4 (lower is better)
Translates to: QHAQPSACLWDWRGAESLSGACV*EILQCR
Trigger: CCTGCACTGGAGGATTTCTCAGACACATGCACCAGA...AAGACTCTCCGCCCCACGCCAATCCCAAAGGCATGCAGATGGCTGTGCATGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp CTTCTGGCCTCCCCTGCGCATTATGGCTCAGTGGCTGCTTCGAGCCAGAATCTGAGAGTACAAATATGCTaGCCTCAGAGAGGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: LLASPAHYGSVAASSQNLRVQIC*PQRGPV
Trigger: CACTGGGCCTCTCTGAGGTCAGCATATTTGTACTCT...CAGATTCTGGCTCGAAGCAGCCACTGAGCCATAATGCGCAGGGGAGGCCAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp CTGTTTTCATCATGTGCTAAAGTTGCCTGCCTGGCACCTCAGGGAACAAAGATCGGCCTCTGGGCCTGCTaGTCCATGGCCAACAAGGGG +
Preference number: 4 (lower is better)
Translates to: LFSSCAKVACLAPQGTKIGLWAC*SMANKG
Trigger: CCCCTTGTTGGCCATGGAGCAGCAGGCCCAGAGGCC...GATCTTTGTTCCCTGAGGTGCCAGGCAGGCAACTTTAGCACATGATGAAAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp AGCTTCATTTACCAGAATGCCTCTGTGAGAAATGCTGTCATTGCCAGGCCCACCGTGGCCTCCCGCACCTaGTTGATGGCCTGGCACATG +
Preference number: 4 (lower is better)
Translates to: SFIYQNASVRNAVIARPTVASRT*LMAWHM
Trigger: CATGTGCCAGGCCATCAAGCAGGTGCGGGAGGCCAC...GGTGGGCCTGGCAATGACAGCATTTCTCACAGAGGCATTCTGGTAAATGAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp TGTAGAACTTTACGGGGTTCATGGGGACACCTAGCTAAGAATCCCTGCTATGTAGCCGGGTACTCCGGCTaGCTCCATCCGGTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: CRTLRGSWGHLAKNPCYVAGYSG*LHPVGQ
Trigger: CTGGCCAACCGGATGGAGGCAGCCGGAGTACCCGGC...TACATAGCAGGGATTCTTAGCTAGGTGTCCCCATGAACCCCGTAAAGTTCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp TTTGCATTTGCCTTGACTCACGCAGTTTCAGAGCAAGAACGGCTCAGCATTTGTGTGGCCTCCGTGATGTaGACCCGGCCGGGTACTCCG +
Preference number: 4 (lower is better)
Translates to: FAFALTHAVSEQERLSICVASVM*TRPGTP
Trigger: CGGAGTACCCGGCCGGGTGCACATCACGGAGGCCAC...ACAAATGCTGAGCCGTTCTTGCTCTGAAACTGCGTGAGTCAAGGCAAATGCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp GAACAAAGATCTCAAAGTCAGCCCCGAACCAGTGAACATTCTCCAGCTGGCCTGACAGGGCTCTTGTCTTaGTGCTCGCGGCCAGTAGGC +
Preference number: 4 (lower is better)
Translates to: EQRSQSQPRTSEHSPAGLTGLLS*CSRPVG
Trigger: GCCTACTGGCCGCGAGCAGCAAGACAAGAGCCCTGT...CAGGCCAGCTGGAGAATGTTCACTGGTTCGGGGCTGACTTTGAGATCTTTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp AGCTTCATTTACCAGAATGCCTCTGTGAGAAATGCTGTCATTGCCAGGCCCACCAGCTCCTGGTTCTCGTaGCCTGAGGCGACGCTGAGC +
Preference number: 4 (lower is better)
Translates to: SFIYQNASVRNAVIARPTSSWFS*PEATLS
Trigger: GCTCAGCGTCGCCTCAGGGCACGAGAACCAGGAGCT...GGTGGGCCTGGCAATGACAGCATTTCTCACAGAGGCATTCTGGTAAATGAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp GAATGCCTCTGTGAGAAATGCTGTCATTGCCAGGCCCACCAGGGAGAGGGAGTCGCTTGCCTCACAAGCTaGCTCATTCAAAGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: ECLCEKCCHCQAHQGEGVACLTS*LIQRQG
Trigger: GCCTTGCCTTTGAATGAGGCAGCTTGTGAGGCAAGC...GACTCCCTCTCCCTGGTGGGCCTGGCAATGACAGCATTTCTCACAGAGGCATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp CACCTTACTTTCAAAGCACCTCTCTCCAGAATGCTTGCCTCACAAGCTGCCTCAGGGTCCGCACAGCTCTaGCACCAGGCCTCACTCACT +
Preference number: 4 (lower is better)
Translates to: HLTFKAPLSRMLASQAASGSAQL*HQASLT
Trigger: AGTGAGTGAGGCCTGGTGCCAGAGCTGTGCGGACCC...TGAGGCAGCTTGTGAGGCAAGCATTCTGGAGAGAGGTGCTTTGAAAGTAAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp TGTAGAACTTTACGGGGTTCATGGGGACACCTAGCTAAGAATCCCTGCTATGTATGGGGAGAGGGCCTCTaGGCCTGCTGCTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: CRTLRGSWGHLAKNPCYVWGEGL*ACCSMA
Trigger: GGCCATGGAGCAGCAGGCCCAGAGGCCCTCTCCCCA...TACATAGCAGGGATTCTTAGCTAGGTGTCCCCATGAACCCCGTAAAGTTCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp CCCTTTCAGCTTCATTTACCAGAATGCCTCTGTGAGAAATGCTGTCATTGCCAGTGGGGAGAGGGCCTCTaGGCCTGCTGCTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: PFQLHLPECLCEKCCHCQWGEGL*ACCSMA
Trigger: GGCCATGGAGCAGCAGGCCCAGAGGCCCTCTCCCCA...CTGGCAATGACAGCATTTCTCACAGAGGCATTCTGGTAAATGAAGCTGAAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp GTTTCAGAGCAAGAACGGCTCAGCATTTGTGAGGGGGCGGGCTTCCCAGATCCAGATGCATCCTGCATTTaGTGCTTGTGGAAGGCGCCT +
Preference number: 4 (lower is better)
Translates to: VSEQERLSICEGAGFPDPDASCI*CLWKAP
Trigger: AGGCGCCTTCCACAAGCACCAAATGCAGGATGCATC...TGGATCTGGGAAGCCCGCCCCCTCACAAATGCTGAGCCGTTCTTGCTCTGAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp TCTAGAAAAACAGACCTCACTTGTGCGTGCCCACAGGCCACTGAGGTGGAAGTCCCAGCTTCATGCCCATaGAGATGTGGGCCGGAAGCA +
Preference number: 4 (lower is better)
Translates to: SRKTDLTCACPQATEVEVPASCP*RCGPEA
Trigger: TGCTTCCGGCCCACATCTCCATGGGCATGAAGCTGG...GACTTCCACCTCAGTGGCCTGTGGGCACGCACAAGTGAGGTCTGTTTTTCTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp TTTGCATTTGCCTTGACTCACGCAGTTTCAGAGCAAGAACGGCTCAGCATTTGTACGCAGTTCCGGGCGTaGGTAGGCAGCGACACGGGC +
Preference number: 4 (lower is better)
Translates to: FAFALTHAVSEQERLSICTQFRA*VGSDTG
Trigger: GCCCGTGTCGCTGCCTACCCACGCCCGGAACTGCGT...ACAAATGCTGAGCCGTTCTTGCTCTGAAACTGCGTGAGTCAAGGCAAATGCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp AAGAGTACAAATATGCTGACCTCAGAGAGGCCCAGTGCACTAATGTGTTTCTATGGGCCGCGTCCCCCTTaGGCCTGGGGAGGTGTTGGC +
Preference number: 4 (lower is better)
Translates to: KSTNMLTSERPSALMCFYGPRPP*AWGGVG
Trigger: GCCAACACCTCCCCAGGCCCAAGGGGGACGCGGCCC...ATAGAAACACATTAGTGCACTGGGCCTCTCTGAGGTCAGCATATTTGTACTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp TTCTATGTTATATTAGCAACAGAAACCTTCCTGACTTGCCAGGAGAGCCCCCGCCGCCCGTTGGGGACGTaGGTCTCACCACTGCTCACG +
Preference number: 4 (lower is better)
Translates to: FYVILATETFLTCQESPRRPLGT*VSPLLT
Trigger: CGTGAGCAGTGGTGAGACCCACGTCCCCAACGGGCG...GCGGGGGCTCTCCTGGCAAGTCAGGAAGGTTTCTGTTGCTAATATAACATAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
CDS-3UTR CCA 90 bp ACCCCTTTCAGCTTCATTTACCAGAATGCCTCTGTGAGAAATGCTGTCATTGCCGTCCGGCGGTGGCGCTaGGGAACGCTCTTAGGCCTC +
Preference number: 4 (lower is better)
Translates to: TPFSFIYQNASVRNAVIAVRRWR*GTLLGL
Trigger: GAGGCCTAAGAGCGTTCCCCAGCGCCACCGCCGGAC...GGCAATGACAGCATTTCTCACAGAGGCATTCTGGTAAATGAAGCTGAAAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
CDS-3UTR CCA 90 bp CTGTTTTCATCATGTGCTAAAGTTGCCTGCCTGGCACCTCAGGGAACAAAGATCTCTGGGGTCCGGCGGTaGCGCTGGGGAACGCTCTTA +
Preference number: 4 (lower is better)
Translates to: LFSSCAKVACLAPQGTKISGVRR*RWGTLL
Trigger: TAAGAGCGTTCCCCAGCGCCACCGCCGGACCCCAGA...GATCTTTGTTCCCTGAGGTGCCAGGCAGGCAACTTTAGCACATGATGAAAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
CDS-3UTR CCA 90 bp CACCTTACTTTCAAAGCACCTCTCTCCAGAATGCTTGCCTCACAAGCTGCCTCACCTCCGACCGCCCCTTaGGGGACATGCTTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: HLTFKAPLSRMLASQAASPPTAP*GTCFCL
Trigger: CAGACAGAAGCATGTCCCCCAAGGGGCGGTCGGAGG...TGAGGCAGCTTGTGAGGCAAGCATTCTGGAGAGAGGTGCTTTGAAAGTAAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp GGCTCACACAGGGCTCTTGTCTTGCTGCTCGCGGCCAGTAGGCCTGTCTCATTGGGTAGAAATTGGTCATaGTCTTCAGGTCCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: GSHRALVLLLAASRPVSLGRNWS*SSGPSR
Trigger: CCTGGAAGGACCTGAAGACCATGACCAATTTCTACC...CAATGAGACAGGCCTACTGGCCGCGAGCAGCAAGACAAGAGCCCTGTGTGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673973.1
CDS-3UTR CCA 90 bp TCTAGAAAAACAGACCTCACTTGTGCGTGCCCACAGGCCACTGAGGTGGAAGTCTTGTCACCGATAAAGTaGGCAGCCACGTGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SRKTDLTCACPQATEVEVLSPIK*AATWAG
Trigger: GCCAGCCCACGTGGCTGCCCACTTTATCGGTGACAA...GACTTCCACCTCAGTGGCCTGTGGGCACGCACAAGTGAGGTCTGTTTTTCTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp GCTCCTGTATGCAAGACTTTGTGTAGAACTTTACGGGGTTCATGGGGACACCTATGCCGCTCCAGCTCCTaGTTCTCGTGCCCTGAGGCG +
Preference number: 4 (lower is better)
Translates to: APVCKTLCRTLRGSWGHLCRSSS*FSCPEA
Trigger: CGCCTCAGGGCACGAGAACCAGGAGCTGGAGCGGCA...TAGGTGTCCCCATGAACCCCGTAAAGTTCTACACAAAGTCTTGCATACAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp GGGAGAGGGAGTCTCCAATCCGTGCTAGACAGCTCAGCTTACTCCCCCTTGGTGATTCTCCAGCTGGCCTaGAAACTGTTACAGACCAGG +
Preference number: 4 (lower is better)
Translates to: GRGSLQSVLDSSAYSPLVILQLA*KLLQTR
Trigger: CCTGGTCTGTAACAGTTTCCAGGCCAGCTGGAGAAT...CACCAAGGGGGAGTAAGCTGAGCTGTCTAGCACGGATTGGAGACTCCCTCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp ATGGGTGCCAGGCGGTACTCGCGCTCAAAGCCCTTCTCCAGGAAGATGGACCCACAGCTTACTCCCCCTTaGTGTCTAGAAAAACAGACC +
Preference number: 4 (lower is better)
Translates to: MGARRYSRSKPFSRKMDPQLTPP*CLEKQT
Trigger: GGTCTGTTTTTCTAGACACCAAGGGGGAGTAAGCTG...TGGGTCCATCTTCCTGGAGAAGGGCTTTGAGCGCGAGTACCGCCTGGCACCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000673973.1
CDS-3UTR CCA 90 bp GATGGCCACAGTGAGCAGGCTGCCGATGGTCAGGACGGCCAGGGTCAGCCTCAGCTCCTTACATGTCAGTaGTTAAAAAGGCAGAGCATA +
Preference number: 4 (lower is better)
Translates to: DGHSEQAADGQDGQGQPQLLTCQ*LKRQSI
Trigger: TATGCTCTGCCTTTTTAACCACTGACATGTAAGGAG...CTGAGGCTGACCCTGGCCGTCCTGACCATCGGCAGCCTGCTCACTGTGGCCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673973.1
CDS-3UTR CCA 90 bp GGATGGGTGCCAGGCGGTACTCGCGCTCAAAGCCCTTCTCCAGGAAGATGGACCGAAGTCCTTGACCCATaGAGAAGGTCACTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: GWVPGGTRAQSPSPGRWTEVLDP*RRSLFV
Trigger: AACAAACAGTGACCTTCTCCATGGGTCAAGGACTTC...GGTCCATCTTCCTGGAGAAGGGCTTTGAGCGCGAGTACCGCCTGGCACCCATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673973.1
CDS-3UTR TCA 90 bp TGTAGAACTTTACGGGGTTCATGGGGACACCTAGCTAAGAATCCCTGCTATGTACCTCCTCGCCCTCGTTaGGGAAGTAGCGCCCCTTGG +
Preference number: 4 (lower is better)
Translates to: CRTLRGSWGHLAKNPCYVPPRPR*GSSAPW
Trigger: CCAAGGGGCGCTACTTCCTCAACGAGGGCGAGGAGG...TACATAGCAGGGATTCTTAGCTAGGTGTCCCCATGAACCCCGTAAAGTTCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp GTTTCAGAGCAAGAACGGCTCAGCATTTGTGAGGGGGCGGGCTTCCCAGATCCAACACCACGAAGACAATaGACAGGAAGAAGGGCACCT +
Preference number: 4 (lower is better)
Translates to: VSEQERLSICEGAGFPDPTPRRQ*TGRRAP
Trigger: AGGTGCCCTTCTTCCTGTTCATTGTCTTCGTGGTGT...TGGATCTGGGAAGCCCGCCCCCTCACAAATGCTGAGCCGTTCTTGCTCTGAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp AGCTTCATTTACCAGAATGCCTCTGTGAGAAATGCTGTCATTGCCAGGCCCACCCAGCGCCCCGCATGCTaGAGGGCAGTAGTGTGTACA +
Preference number: 4 (lower is better)
Translates to: SFIYQNASVRNAVIARPTQRPAC*RAVVCT
Trigger: TGTACACACTACTGCCCTTCAGCATGCGGGGCGCTG...GGTGGGCCTGGCAATGACAGCATTTCTCACAGAGGCATTCTGGTAAATGAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp CTCCAATCCGTGCTAGACAGCTCAGCTTACTCCCCCTTGGTGTCTAGAAAAACACAGCGCCCCGCATGCTaGAGGGCAGTAGTGTGTACA +
Preference number: 4 (lower is better)
Translates to: LQSVLDSSAYSPLVSRKTQRPAC*RAVVCT
Trigger: TGTACACACTACTGCCCTTCAGCATGCGGGGCGCTG...TGTTTTTCTAGACACCAAGGGGGAGTAAGCTGAGCTGTCTAGCACGGATTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp CTGTTTTCATCATGTGCTAAAGTTGCCTGCCTGGCACCTCAGGGAACAAAGATCCCTCCCGCACCTGCTTaGTGGCCTGGCACATGTCCA +
Preference number: 4 (lower is better)
Translates to: LFSSCAKVACLAPQGTKIPPAPA*WPGTCP
Trigger: TGGACATGTGCCAGGCCATCAAGCAGGTGCGGGAGG...GATCTTTGTTCCCTGAGGTGCCAGGCAGGCAACTTTAGCACATGATGAAAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp TTTGCATTTGCCTTGACTCACGCAGTTTCAGAGCAAGAACGGCTCAGCATTTGTTTAGCGTGGCCTCCGTaGTGTGCACCCGGCCGGGTA +
Preference number: 4 (lower is better)
Translates to: FAFALTHAVSEQERLSICLAWPP*CAPGRV
Trigger: TACCCGGCCGGGTGCACATCACGGAGGCCACGCTAA...ACAAATGCTGAGCCGTTCTTGCTCTGAAACTGCGTGAGTCAAGGCAAATGCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp AGCTTCATTTACCAGAATGCCTCTGTGAGAAATGCTGTCATTGCCAGGCCCACCCGCTCTCACGGTGGTTaGGATGTGCAAAGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: SFIYQNASVRNAVIARPTRSHGG*DVQRAV
Trigger: CACGGCCCTTTGCACATCTCAACCACCGTGAGAGCG...GGTGGGCCTGGCAATGACAGCATTTCTCACAGAGGCATTCTGGTAAATGAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp AGGCTCCTGTATGCAAGACTTTGTGTAGAACTTTACGGGGTTCATGGGGACACCCGCTCTCACGGTGGTTaGGATGTGCAAAGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: RLLYARLCVELYGVHGDTRSHGG*DVQRAV
Trigger: CACGGCCCTTTGCACATCTCAACCACCGTGAGAGCG...GGTGTCCCCATGAACCCCGTAAAGTTCTACACAAAGTCTTGCATACAGGAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp TACTTTCAAAGCACCTCTCTCCAGAATGCTTGCCTCACAAGCTGCCTCATTCAACCGCCGTCCTGGGCATaGGCAGGACATGGACGAGCA +
Preference number: 4 (lower is better)
Translates to: YFQSTSLQNACLTSCLIQPPSWA*AGHGRA
Trigger: TGCTCGTCCATGTCCTGCTCATGCCCAGGACGGCGG...TTGAATGAGGCAGCTTGTGAGGCAAGCATTCTGGAGAGAGGTGCTTTGAAAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp AGAATACACCTGCCCTTCCTCGGGCTGATAAAGCCACACGACACAGCACAGGCACTGTGTAGAACACTTTaGAGTCCGGCACGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: RIHLPFLGLIKPHDTAQALCRTL*SPARRQ
Trigger: TTGCCTCCGTGCCGGACTTCAAAGTGTTCTACACAG...TGCCTGTGCTGTGTCGTGTGGCTTTATCAGCCCGAGGAAGGGCAGGTGTATTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp GGGAGAGGGAGTCTCCAATCCGTGCTAGACAGCTCAGCTTACTCCCCCTTGGTGACCAGAATGCCTCTGTaGGAAATGCTGTCATTGCCA +
Preference number: 4 (lower is better)
Translates to: GRGSLQSVLDSSAYSPLVTRMPL*EMLSLP
Trigger: TGGCAATGACAGCATTTCTCACAGAGGCATTCTGGT...CACCAAGGGGGAGTAAGCTGAGCTGTCTAGCACGGATTGGAGACTCCCTCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp GAACAAAGATCTCAAAGTCAGCCCCGAACCAGTGAACATTCTCCAGCTGGCCTGCAACAGAAACCTTCCTaGCTTGCCAGGAGAGCCCCC +
Preference number: 4 (lower is better)
Translates to: EQRSQSQPRTSEHSPAGLQQKPS*LARRAP
Trigger: GGGGGCTCTCCTGGCAAGTCAGGAAGGTTTCTGTTG...CAGGCCAGCTGGAGAATGTTCACTGGTTCGGGGCTGACTTTGAGATCTTTGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp CTGGGCAGCACCTCGAGAACTTGGTGGCAAAGCACAGGCCCAGCACCAGCCCCACAAACTATTATTATCTaGGCACAGCACAGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: LGSTSRTWWQSTGPAPAPQTIII*AQHSAL
Trigger: CAAAGCACTGTGCTGTGCTCAGATAATAATAGTTTG...TGGGGCTGGTGCTGGGCCTGTGCTTTGCCACCAAGTTCTCGAGGTGCTGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673973.1
CDS-3UTR GCA 90 bp TTCTATGTTATATTAGCAACAGAAACCTTCCTGACTTGCCAGGAGAGCCCCCGCGAGGGCCTCTGGGCCTaGTGCTCCATGGCCAACAAG +
Preference number: 4 (lower is better)
Translates to: FYVILATETFLTCQESPREGLWA*CSMANK
Trigger: CTTGTTGGCCATGGAGCAGCAGGCCCAGAGGCCCTC...GCGGGGGCTCTCCTGGCAAGTCAGGAAGGTTTCTGTTGCTAATATAACATAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp GTGATGAGGCCACCGGTTAAGTCTTCCGGTTATGAAGTCCATTCAGAAAAAGTCAGGAAGAAGGGCACCTaGTCCCACGCACAGGCCGCC +
Preference number: 4 (lower is better)
Translates to: VMRPPVKSSGYEVHSEKVRKKGT*SHAQAA
Trigger: GGCGGCCTGTGCGTGGGAGCAGGTGCCCTTCTTCCT...GACTTTTTCTGAATGGACTTCATAACCGGAAGACTTAACCGGTGGCCTCATCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp TTCTATGTTATATTAGCAACAGAAACCTTCCTGACTTGCCAGGAGAGCCCCCGCGCTGGCGCTTCTCGATaGGCAGCTTCCGGCGGATCT +
Preference number: 4 (lower is better)
Translates to: FYVILATETFLTCQESPRAGASR*AASGGS
Trigger: AGATCCGCCGGAAGCTGCGCATCGAGAAGCGCCAGC...GCGGGGGCTCTCCTGGCAAGTCAGGAAGGTTTCTGTTGCTAATATAACATAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp AACCTGGCTTTTTGCATTTGCCTTGACTCACGCAGTTTCAGAGCAAGAACGGCTCGAGGTACCGGGTCATaGGCACTGACGCCCGCATCT +
Preference number: 4 (lower is better)
Translates to: NLAFCICLDSRSFRARTARGTGS*ALTPAS
Trigger: AGATGCGGGCGTCAGTGCGCATGACCCGGTACCTCG...AGCCGTTCTTGCTCTGAAACTGCGTGAGTCAAGGCAAATGCAAAAAGCCAGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp CCTTACTTTCAAAGCACCTCTCTCCAGAATGCTTGCCTCACAAGCTGCCTCATTCGAGGTACCGGGTCATaGGCACTGACGCCCGCATCT +
Preference number: 4 (lower is better)
Translates to: PYFQSTSLQNACLTSCLIRGTGS*ALTPAS
Trigger: AGATGCGGGCGTCAGTGCGCATGACCCGGTACCTCG...AATGAGGCAGCTTGTGAGGCAAGCATTCTGGAGAGAGGTGCTTTGAAAGTAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp CTCCAATCCGTGCTAGACAGCTCAGCTTACTCCCCCTTGGTGTCTAGAAAAACAGCTGAGCCCTGCAGCTaGCATGTACGTGCTGCCGAT +
Preference number: 4 (lower is better)
Translates to: LQSVLDSSAYSPLVSRKTAEPCS*HVRAAD
Trigger: ATCGGCAGCACGTACATGGCAGCTGCAGGGCTCAGC...TGTTTTTCTAGACACCAAGGGGGAGTAAGCTGAGCTGTCTAGCACGGATTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp TTAATTTGCAGCCCGGGGCAACTCATCCCAGGACCCCAACAAGTCTGGTCAGTCAAGGAGTTGAAGGAGTaGCTGTTGATGCCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: LICSPGQLIPGPQQVWSVKELKE*LLMPSS
Trigger: GCTGGACGGCATCAACAGGCACTCCTTCAACTCCTT...GACTGACCAGACTTGTTGGGGTCCTGGGATGAGTTGCCCCGGGCTGCAAATTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp AGAAGCCAACATGCACAGCCATCTGCATGCCTTTGGGATTGGCGTGGGGCGGAGCGAGCCAGAATCTGGTaGATGTGTCTGAGAAATCCT +
Preference number: 4 (lower is better)
Translates to: RSQHAQPSACLWDWRGAERARIW*MCLRNP
Trigger: AGGATTTCTCAGACACATGCACCAGATTCTGGCTCG...CTCCGCCCCACGCCAATCCCAAAGGCATGCAGATGGCTGTGCATGTTGGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp AGAATACACCTGCCCTTCCTCGGGCTGATAAAGCCACACGACACAGCACAGGCAGCTTGCCTCACAAGCTaGCTCATTCAAAGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: RIHLPFLGLIKPHDTAQAACLTS*LIQRQG
Trigger: GCCTTGCCTTTGAATGAGGCAGCTTGTGAGGCAAGC...TGCCTGTGCTGTGTCGTGTGGCTTTATCAGCCCGAGGAAGGGCAGGTGTATTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp GTTTCAGAGCAAGAACGGCTCAGCATTTGTGAGGGGGCGGGCTTCCCAGATCCACTCTGCATGCACCCATaGGGAGTAGATCCTTCTAGT +
Preference number: 4 (lower is better)
Translates to: VSEQERLSICEGAGFPDPLCMHP*GVDPSS
Trigger: ACTAGAAGGATCTACTCCGCATGGGTGCATGCAGAG...TGGATCTGGGAAGCCCGCCCCCTCACAAATGCTGAGCCGTTCTTGCTCTGAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp CAACATGCACAGCCATCTGCATGCCTTTGGGATTGGCGTGGGGCGGAGAGTCTTGCTGTACTCTTAATTTaGAGCCCGGGGCAACTCATC +
Preference number: 4 (lower is better)
Translates to: QHAQPSACLWDWRGAESLAVLLI*SPGQLI
Trigger: GATGAGTTGCCCCGGGCTGCAAATTAAGAGTACAGC...AAGACTCTCCGCCCCACGCCAATCCCAAAGGCATGCAGATGGCTGTGCATGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp AGAATACACCTGCCCTTCCTCGGGCTGATAAAGCCACACGACACAGCACAGGCATGCATTTGGTGCTTGTaGAAGGCGCCTGTCAGGTTC +
Preference number: 4 (lower is better)
Translates to: RIHLPFLGLIKPHDTAQACIWCL*KAPVRF
Trigger: GAACCTGACAGGCGCCTTCCACAAGCACCAAATGCA...TGCCTGTGCTGTGTCGTGTGGCTTTATCAGCCCGAGGAAGGGCAGGTGTATTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp TGTAGAACTTTACGGGGTTCATGGGGACACCTAGCTAAGAATCCCTGCTATGTACTGCCTCCATCCGGTTaGCCAGGGACACGTCGTGGG +
Preference number: 4 (lower is better)
Translates to: CRTLRGSWGHLAKNPCYVLPPSG*PGTRRG
Trigger: CCCACGACGTGTCCCTGGCCAACCGGATGGAGGCAG...TACATAGCAGGGATTCTTAGCTAGGTGTCCCCATGAACCCCGTAAAGTTCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp CAAAACCTGGCTTTTTGCATTTGCCTTGACTCACGCAGTTTCAGAGCAAGAACGCTGCCTCCATCCGGTTaGCCAGGGACACGTCGTGGG +
Preference number: 4 (lower is better)
Translates to: QNLAFCICLDSRSFRARTLPPSG*PGTRRG
Trigger: CCCACGACGTGTCCCTGGCCAACCGGATGGAGGCAG...CGTTCTTGCTCTGAAACTGCGTGAGTCAAGGCAAATGCAAAAAGCCAGGTTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp AAGAGTACAAATATGCTGACCTCAGAGAGGCCCAGTGCACTAATGTGTTTCTATCGTCCCCCTTGGGCCTaGGGAGGTGTTGGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: KSTNMLTSERPSALMCFYRPPWA*GGVGWA
Trigger: CGCCCAGCCAACACCTCCCCAGGCCCAAGGGGGACG...ATAGAAACACATTAGTGCACTGGGCCTCTCTGAGGTCAGCATATTTGTACTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp CCCTTTCAGCTTCATTTACCAGAATGCCTCTGTGAGAAATGCTGTCATTGCCAGGGACATGCTTCTGTCTaGGGTCCGGCGGTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: PFQLHLPECLCEKCCHCQGHASV*GPAVAL
Trigger: CAGCGCCACCGCCGGACCCCAGACAGAAGCATGTCC...CTGGCAATGACAGCATTTCTCACAGAGGCATTCTGGTAAATGAAGCTGAAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp GCTCCTGTATGCAAGACTTTGTGTAGAACTTTACGGGGTTCATGGGGACACCTACCTCCGACCGCCCCTTaGGGGACATGCTTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: APVCKTLCRTLRGSWGHLPPTAP*GTCFCL
Trigger: CAGACAGAAGCATGTCCCCCAAGGGGCGGTCGGAGG...TAGGTGTCCCCATGAACCCCGTAAAGTTCTACACAAAGTCTTGCATACAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp TTCTATGTTATATTAGCAACAGAAACCTTCCTGACTTGCCAGGAGAGCCCCCGCGAGCGTCCCCCGAGCTaGGCAGCACCTCGAGAACTT +
Preference number: 4 (lower is better)
Translates to: FYVILATETFLTCQESPRERPPS*AAPREL
Trigger: AAGTTCTCGAGGTGCTGCCCAGCTCGGGGGACGCTC...GCGGGGGCTCTCCTGGCAAGTCAGGAAGGTTTCTGTTGCTAATATAACATAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp CAACATGCACAGCCATCTGCATGCCTTTGGGATTGGCGTGGGGCGGAGAGTCTTGGTTCACGTTCTCCATaGTCTCAAACTCCTCGTGCT +
Preference number: 4 (lower is better)
Translates to: QHAQPSACLWDWRGAESLGSRSP*SQTPRA
Trigger: AGCACGAGGAGTTTGAGACCATGGAGAACGTGAACC...AAGACTCTCCGCCCCACGCCAATCCCAAAGGCATGCAGATGGCTGTGCATGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp AGAAGCCAACATGCACAGCCATCTGCATGCCTTTGGGATTGGCGTGGGGCGGAGGTCTCCTCGGTAACCTaGATTTTCCCAAGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: RSQHAQPSACLWDWRGAEVSSVT*IFPSSP
Trigger: TGGAGAACTTGGGAAAATCCAGGTTACCGAGGAGAC...CTCCGCCCCACGCCAATCCCAAAGGCATGCAGATGGCTGTGCATGTTGGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp AGGCTCCTGTATGCAAGACTTTGTGTAGAACTTTACGGGGTTCATGGGGACACCCCATCTGCATGCCTTTaGGATTGGCGTGGGGCGGAG +
Preference number: 4 (lower is better)
Translates to: RLLYARLCVELYGVHGDTPSACL*DWRGAE
Trigger: CTCCGCCCCACGCCAATCCCAAAGGCATGCAGATGG...GGTGTCCCCATGAACCCCGTAAAGTTCTACACAAAGTCTTGCATACAGGAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp AGAATACACCTGCCCTTCCTCGGGCTGATAAAGCCACACGACACAGCACAGGCAGGACCCCAACAAGTCTaGTCAGTCACCCAATCTGCA +
Preference number: 4 (lower is better)
Translates to: RIHLPFLGLIKPHDTAQAGPQQV*SVTQSA
Trigger: TGCAGATTGGGTGACTGACCAGACTTGTTGGGGTCC...TGCCTGTGCTGTGTCGTGTGGCTTTATCAGCCCGAGGAAGGGCAGGTGTATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR CCA 90 bp AACGGCTCAGCATTTGTGAGGGGGCGGGCTTCCCAGATCCAGGAGCCTCTGCATGAAGTCCTTGACCCATaGAGAAGGTCACTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: NGSAFVRGRASQIQEPLHEVLDP*RRSLFV
Trigger: AACAAACAGTGACCTTCTCCATGGGTCAAGGACTTC...ATGCAGAGGCTCCTGGATCTGGGAAGCCCGCCCCCTCACAAATGCTGAGCCGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp CCTTACTTTCAAAGCACCTCTCTCCAGAATGCTTGCCTCACAAGCTGCCTCATTGCATCCAGACTGGGCTaGCTCCACACGCAGTTCCTC +
Preference number: 4 (lower is better)
Translates to: PYFQSTSLQNACLTSCLIASRLG*LHTQFL
Trigger: GAGGAACTGCGTGTGGAGTCAGCCCAGTCTGGATGC...AATGAGGCAGCTTGTGAGGCAAGCATTCTGGAGAGAGGTGCTTTGAAAGTAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp AGCTTCATTTACCAGAATGCCTCTGTGAGAAATGCTGTCATTGCCAGGCCCACCGCCCATGCTGGCTGGTaGGCTGGTACTTCTCGTAGA +
Preference number: 4 (lower is better)
Translates to: SFIYQNASVRNAVIARPTAHAGW*AGTSRR
Trigger: TCTACGAGAAGTACCAGCTCACCAGCCAGCATGGGC...GGTGGGCCTGGCAATGACAGCATTTCTCACAGAGGCATTCTGGTAAATGAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp CACCTTACTTTCAAAGCACCTCTCTCCAGAATGCTTGCCTCACAAGCTGCCTCAGCCCATGCTGGCTGGTaGGCTGGTACTTCTCGTAGA +
Preference number: 4 (lower is better)
Translates to: HLTFKAPLSRMLASQAASAHAGW*AGTSRR
Trigger: TCTACGAGAAGTACCAGCTCACCAGCCAGCATGGGC...TGAGGCAGCTTGTGAGGCAAGCATTCTGGAGAGAGGTGCTTTGAAAGTAAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp GAACAAAGATCTCAAAGTCAGCCCCGAACCAGTGAACATTCTCCAGCTGGCCTGGGACACTGGGTGTCGTaGAGCCTCCCATCAAAGAAC +
Preference number: 4 (lower is better)
Translates to: EQRSQSQPRTSEHSPAGLGHWVS*SLPSKN
Trigger: GTTCTTTGATGGGAGGCTTCACGACACCCAGTGTCC...CAGGCCAGCTGGAGAATGTTCACTGGTTCGGGGCTGACTTTGAGATCTTTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp CACCTTACTTTCAAAGCACCTCTCTCCAGAATGCTTGCCTCACAAGCTGCCTCATCCCACACAGGAAGATaGCTGCGTTGGCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: HLTFKAPLSRMLASQAASSHTGR*LRWPAA
Trigger: AGCTGCTGGCCAACGCAGTCATCTTCCTGTGTGGGA...TGAGGCAGCTTGTGAGGCAAGCATTCTGGAGAGAGGTGCTTTGAAAGTAAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp AGGCTCCTGTATGCAAGACTTTGTGTAGAACTTTACGGGGTTCATGGGGACACCTCCCACACAGGAAGATaGCTGCGTTGGCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: RLLYARLCVELYGVHGDTSHTGR*LRWPAA
Trigger: AGCTGCTGGCCAACGCAGTCATCTTCCTGTGTGGGA...GGTGTCCCCATGAACCCCGTAAAGTTCTACACAAAGTCTTGCATACAGGAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp TCTAGAAAAACAGACCTCACTTGTGCGTGCCCACAGGCCACTGAGGTGGAAGTCACTTCACAGTGTAGGTaGAGAGGTCCCGGGATGCAT +
Preference number: 4 (lower is better)
Translates to: SRKTDLTCACPQATEVEVTSQCR*RGPGMH
Trigger: ATGCATCCCGGGACCTCTTCACCTACACTGTGAAGT...GACTTCCACCTCAGTGGCCTGTGGGCACGCACAAGTGAGGTCTGTTTTTCTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp CAAAACCTGGCTTTTTGCATTTGCCTTGACTCACGCAGTTTCAGAGCAAGAACGCCTCCCGCACCTGCTTaGTGGCCTGGCACATGTCCA +
Preference number: 4 (lower is better)
Translates to: QNLAFCICLDSRSFRARTPPAPA*WPGTCP
Trigger: TGGACATGTGCCAGGCCATCAAGCAGGTGCGGGAGG...CGTTCTTGCTCTGAAACTGCGTGAGTCAAGGCAAATGCAAAAAGCCAGGTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp TACTTTCAAAGCACCTCTCTCCAGAATGCTTGCCTCACAAGCTGCCTCATTCAAACTTGCGCAGCCCGATaGCCCCGCACAGCACATTCC +
Preference number: 4 (lower is better)
Translates to: YFQSTSLQNACLTSCLIQTCAAR*PRTAHS
Trigger: GGAATGTGCTGTGCGGGGTCATCGGGCTGCGCAAGT...TTGAATGAGGCAGCTTGTGAGGCAAGCATTCTGGAGAGAGGTGCTTTGAAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp TTTGCATTTGCCTTGACTCACGCAGTTTCAGAGCAAGAACGGCTCAGCATTTGTAGGGCCTCGTGGAGCTaGGCCCCTCAATGGCTGACA +
Preference number: 4 (lower is better)
Translates to: FAFALTHAVSEQERLSICRASWS*APQWLT
Trigger: TGTCAGCCATTGAGGGGCTCAGCTCCACGAGGCCCT...ACAAATGCTGAGCCGTTCTTGCTCTGAAACTGCGTGAGTCAAGGCAAATGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp TTAATTTGCAGCCCGGGGCAACTCATCCCAGGACCCCAACAAGTCTGGTCAGTCCCAGCCCTTCTTTGTTaGCATCGCACTCTGTGTAGA +
Preference number: 4 (lower is better)
Translates to: LICSPGQLIPGPQQVWSVPALLC*HRTLCR
Trigger: TCTACACAGAGTGCGATGTCAACAAAGAAGGGCTGG...GACTGACCAGACTTGTTGGGGTCCTGGGATGAGTTGCCCCGGGCTGCAAATTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp AGCTTCATTTACCAGAATGCCTCTGTGAGAAATGCTGTCATTGCCAGGCCCACCTTCAGCCCCAGCCCCTaGAACTTGGCAGTGTCCGTA +
Preference number: 4 (lower is better)
Translates to: SFIYQNASVRNAVIARPTFSPSP*NLAVSV
Trigger: TACGGACACTGCCAAGTTTCAGGGGCTGGGGCTGAA...GGTGGGCCTGGCAATGACAGCATTTCTCACAGAGGCATTCTGGTAAATGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp CACCTTACTTTCAAAGCACCTCTCTCCAGAATGCTTGCCTCACAAGCTGCCTCATTCAGCCCCAGCCCCTaGAACTTGGCAGTGTCCGTA +
Preference number: 4 (lower is better)
Translates to: HLTFKAPLSRMLASQAASFSPSP*NLAVSV
Trigger: TACGGACACTGCCAAGTTTCAGGGGCTGGGGCTGAA...TGAGGCAGCTTGTGAGGCAAGCATTCTGGAGAGAGGTGCTTTGAAAGTAAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp CTCCAATCCGTGCTAGACAGCTCAGCTTACTCCCCCTTGGTGTCTAGAAAAACATCAGCCCCGAACCAGTaGACATTCTCCAGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: LQSVLDSSAYSPLVSRKTSAPNQ*TFSSWP
Trigger: AGGCCAGCTGGAGAATGTTCACTGGTTCGGGGCTGA...TGTTTTTCTAGACACCAAGGGGGAGTAAGCTGAGCTGTCTAGCACGGATTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp CTCCAATCCGTGCTAGACAGCTCAGCTTACTCCCCCTTGGTGTCTAGAAAAACACCCGCCTTCTTGCTGTaGCCACATTCCTCAGGACTC +
Preference number: 4 (lower is better)
Translates to: LQSVLDSSAYSPLVSRKTPAFLL*PHSSGL
Trigger: GAGTCCTGAGGAATGTGGTCACAGCAAGAAGGCGGG...TGTTTTTCTAGACACCAAGGGGGAGTAAGCTGAGCTGTCTAGCACGGATTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp AGAAGCCAACATGCACAGCCATCTGCATGCCTTTGGGATTGGCGTGGGGCGGAGGAACGCAAAGATGTGTaGGTAATCAAGGAAGAGGTG +
Preference number: 4 (lower is better)
Translates to: RSQHAQPSACLWDWRGAEERKDV*VIKEEV
Trigger: CACCTCTTCCTTGATTACTCACACATCTTTGCGTTC...CTCCGCCCCACGCCAATCCCAAAGGCATGCAGATGGCTGTGCATGTTGGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp TGCTCCCCGCCTTCTTGCTGTGACCACATTCCTCAGGACTCTATCCCCACAGCCTTTTTGCATTTGCCTTaGCTCACGCAGTTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: CSPPSCCDHIPQDSIPTAFLHLP*LTQFQS
Trigger: GCTCTGAAACTGCGTGAGTCAAGGCAAATGCAAAAA...GGCTGTGGGGATAGAGTCCTGAGGAATGTGGTCACAGCAAGAAGGCGGGGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp GTTCCCTCCACCGCCACCCCCGCACTTAGCTGTACTCTTAATTTGCAGCCCGGGAATTCCTTGGGAAGTTaGAGCACAGTAAGACACATC +
Preference number: 4 (lower is better)
Translates to: VPSTATPALSCTLNLQPGNSLGS*STVRHI
Trigger: GATGTGTCTTACTGTGCTTCAACTTCCCAAGGAATT...CCCGGGCTGCAAATTAAGAGTACAGCTAAGTGCGGGGGTGGCGGTGGAGGGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp AGCTTCATTTACCAGAATGCCTCTGTGAGAAATGCTGTCATTGCCAGGCCCACCCAACAGAAACCTTCCTaGCTTGCCAGGAGAGCCCCC +
Preference number: 4 (lower is better)
Translates to: SFIYQNASVRNAVIARPTQQKPS*LARRAP
Trigger: GGGGGCTCTCCTGGCAAGTCAGGAAGGTTTCTGTTG...GGTGGGCCTGGCAATGACAGCATTTCTCACAGAGGCATTCTGGTAAATGAAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR TCA 90 bp TCAGCATTTGTGAGGGGGCGGGCTTCCCAGATCCAGGAGCCTCTGCATGCACCCCAAACTATTATTATCTaGGCACAGCACAGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: SAFVRGRASQIQEPLHAPQTIII*AQHSAL
Trigger: CAAAGCACTGTGCTGTGCTCAGATAATAATAGTTTG...GGGTGCATGCAGAGGCTCCTGGATCTGGGAAGCCCGCCCCCTCACAAATGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp ACCCCTTTCAGCTTCATTTACCAGAATGCCTCTGTGAGAAATGCTGTCATTGCCGAGGGCCTCTGGGCCTaGTGCTCCATGGCCAACAAG +
Preference number: 4 (lower is better)
Translates to: TPFSFIYQNASVRNAVIAEGLWA*CSMANK
Trigger: CTTGTTGGCCATGGAGCAGCAGGCCCAGAGGCCCTC...GGCAATGACAGCATTTCTCACAGAGGCATTCTGGTAAATGAAGCTGAAAGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp GTGTCTAGAAAAACAGACCTCACTTGTGCGTGCCCACAGGCCACTGAGGTGGAAGAAGAGGTCCCGGGATaGATCCTGCATTTGGTGCTT +
Preference number: 4 (lower is better)
Translates to: VSRKTDLTCACPQATEVEEEVPG*ILHLVL
Trigger: AAGCACCAAATGCAGGATGCATCCCGGGACCTCTTC...TTCCACCTCAGTGGCCTGTGGGCACGCACAAGTGAGGTCTGTTTTTCTAGACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp ATAGTCAATCTGTCTGGAGAGTGTAAGCAGGGTGATGTAGAACAGGACCAGGTAGCTGGCGCTTCTCGATaGGCAGCTTCCGGCGGATCT +
Preference number: 4 (lower is better)
Translates to: IVNLSGECKQGDVEQDQVAGASR*AASGGS
Trigger: AGATCCGCCGGAAGCTGCGCATCGAGAAGCGCCAGC...TACCTGGTCCTGTTCTACATCACCCTGCTTACACTCTCCAGACAGATTGACTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673973.1
CDS-3UTR GCA 90 bp AGCTTCATTTACCAGAATGCCTCTGTGAGAAATGCTGTCATTGCCAGGCCCACCCAGCGACGGTCACCATaGTCCTTGAGCCGTTCGATG +
Preference number: 4 (lower is better)
Translates to: SFIYQNASVRNAVIARPTQRRSP*SLSRSM
Trigger: CATCGAACGGCTCAAGGAGCATGGTGACCGTCGCTG...GGTGGGCCTGGCAATGACAGCATTTCTCACAGAGGCATTCTGGTAAATGAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp CTCCAATCCGTGCTAGACAGCTCAGCTTACTCCCCCTTGGTGTCTAGAAAAACACAGCGACGGTCACCATaGTCCTTGAGCCGTTCGATG +
Preference number: 4 (lower is better)
Translates to: LQSVLDSSAYSPLVSRKTQRRSP*SLSRSM
Trigger: CATCGAACGGCTCAAGGAGCATGGTGACCGTCGCTG...TGTTTTTCTAGACACCAAGGGGGAGTAAGCTGAGCTGTCTAGCACGGATTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp GTGTCTAGAAAAACAGACCTCACTTGTGCGTGCCCACAGGCCACTGAGGTGGAAAGTTGTTGTCAGGCATaGAGCGACGGTCACCATGCT +
Preference number: 4 (lower is better)
Translates to: VSRKTDLTCACPQATEVESCCQA*SDGHHA
Trigger: AGCATGGTGACCGTCGCTGCATGCCTGACAACAACT...TTCCACCTCAGTGGCCTGTGGGCACGCACAAGTGAGGTCTGTTTTTCTAGACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp CAAAACCTGGCTTTTTGCATTTGCCTTGACTCACGCAGTTTCAGAGCAAGAACGGTGGCCTCCCGCACCTaGTTGATGGCCTGGCACATG +
Preference number: 4 (lower is better)
Translates to: QNLAFCICLDSRSFRARTVASRT*LMAWHM
Trigger: CATGTGCCAGGCCATCAAGCAGGTGCGGGAGGCCAC...CGTTCTTGCTCTGAAACTGCGTGAGTCAAGGCAAATGCAAAAAGCCAGGTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp CACCTTACTTTCAAAGCACCTCTCTCCAGAATGCTTGCCTCACAAGCTGCCTCATACGCCTTGTCCAGGTaGTTTAGCGTGGCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: HLTFKAPLSRMLASQAASYALSR*FSVASV
Trigger: CACGGAGGCCACGCTAAAGCACCTGGACAAGGCGTA...TGAGGCAGCTTGTGAGGCAAGCATTCTGGAGAGAGGTGCTTTGAAAGTAAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp TACTTTCAAAGCACCTCTCTCCAGAATGCTTGCCTCACAAGCTGCCTCATTCAACGAGGTACCGGGTCATaGGCACTGACGCCCGCATCT +
Preference number: 4 (lower is better)
Translates to: YFQSTSLQNACLTSCLIQRGTGS*ALTPAS
Trigger: AGATGCGGGCGTCAGTGCGCATGACCCGGTACCTCG...TTGAATGAGGCAGCTTGTGAGGCAAGCATTCTGGAGAGAGGTGCTTTGAAAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp ACCCCTTTCAGCTTCATTTACCAGAATGCCTCTGTGAGAAATGCTGTCATTGCCACGGTGGTTGAGATGTaGAAAGGGCCGTGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: TPFSFIYQNASVRNAVIATVVEM*KGPCRP
Trigger: GGGGCGGCACGGCCCTTTGCACATCTCAACCACCGT...GGCAATGACAGCATTTCTCACAGAGGCATTCTGGTAAATGAAGCTGAAAGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp TGTAGAACTTTACGGGGTTCATGGGGACACCTAGCTAAGAATCCCTGCTATGTAACGGTGGTTGAGATGTaGAAAGGGCCGTGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: CRTLRGSWGHLAKNPCYVTVVEM*KGPCRP
Trigger: GGGGCGGCACGGCCCTTTGCACATCTCAACCACCGT...TACATAGCAGGGATTCTTAGCTAGGTGTCCCCATGAACCCCGTAAAGTTCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp GAACAAAGATCTCAAAGTCAGCCCCGAACCAGTGAACATTCTCCAGCTGGCCTGCATGGACGAGCAGGATaGAGACGAAGATCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: EQRSQSQPRTSEHSPAGLHGRAG*RRRSGW
Trigger: CCAGCCTGATCTTCGTCTGCATCCTGCTCGTCCATG...CAGGCCAGCTGGAGAATGTTCACTGGTTCGGGGCTGACTTTGAGATCTTTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp ATAGTCAATCTGTCTGGAGAGTGTAAGCAGGGTGATGTAGAACAGGACCAGGTAGGGCTCTTGTCTTGCTaGTCGCGGCCAGTAGGCCTG +
Preference number: 4 (lower is better)
Translates to: IVNLSGECKQGDVEQDQVGLLSC*SRPVGL
Trigger: CAGGCCTACTGGCCGCGAGCAGCAAGACAAGAGCCC...TACCTGGTCCTGTTCTACATCACCCTGCTTACACTCTCCAGACAGATTGACTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673973.1
CDS-3UTR GCA 90 bp AACCTGGCTTTTTGCATTTGCCTTGACTCACGCAGTTTCAGAGCAAGAACGGCTACACCAATGTGGGCATaGTGCCGCTCCAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: NLAFCICLDSRSFRARTATPMWA*CRSSSW
Trigger: CCAGGAGCTGGAGCGGCAGCATGCCCACATTGGTGT...AGCCGTTCTTGCTCTGAAACTGCGTGAGTCAAGGCAAATGCAAAAAGCCAGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp GTTTCAGAGCAAGAACGGCTCAGCATTTGTGAGGGGGCGGGCTTCCCAGATCCACGAGCCAGAATCTGGTaGATGTGTCTGAGAAATCCT +
Preference number: 4 (lower is better)
Translates to: VSEQERLSICEGAGFPDPRARIW*MCLRNP
Trigger: AGGATTTCTCAGACACATGCACCAGATTCTGGCTCG...TGGATCTGGGAAGCCCGCCCCCTCACAAATGCTGAGCCGTTCTTGCTCTGAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp GAACAAAGATCTCAAAGTCAGCCCCGAACCAGTGAACATTCTCCAGCTGGCCTGTGCTCCCCGCCTTCTTaGTGTGACCACATTCCTCAG +
Preference number: 4 (lower is better)
Translates to: EQRSQSQPRTSEHSPAGLCSPPS*CDHIPQ
Trigger: CTGAGGAATGTGGTCACAGCAAGAAGGCGGGGAGCA...CAGGCCAGCTGGAGAATGTTCACTGGTTCGGGGCTGACTTTGAGATCTTTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254235.7
ENST00000394697.7
ENST00000673801.1
ENST00000673973.1
CDS-3UTR GCA 90 bp GCTCTTGTCTTGCTGCTCGCGGCCAGTAGGCCTGTCTCATTGCCAACAGGCAGCAAAGGAAAGAAGAGATaGACTCACAGGTTGTCCAAG +
Preference number: 4 (lower is better)
Translates to: ALVLLLAASRPVSLPTGSKGKKR*THRLSK
Trigger: CTTGGACAACCTGTGAGTGCATCTCTTCTTTCCTTT...GCTGCCTGTTGGCAATGAGACAGGCCTACTGGCCGCGAGCAGCAAGACAAG