RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADCY6 (Homo sapiens)

Ensembl gene IDs: ENSG00000174233

Ensembl transcript IDs: ENST00000307885.4, ENST00000357869.8, ENST00000547260.5, ENST00000548351.1, ENST00000548820.1, ENST00000550422.5, ENST00000551435.1, ENST00000552090.1, ENST00000552099.5

Found 920 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCACTGTGGTACGGGGATCCAGGGTGTGGACAGGCCCTCCCACCTaGCAAGAAGCAGAGACAAGCCACCCAAGGCTGAGGTCTTCCCAC +
Preference number: 1 (lower is better)
Translates to: GTVVRGSRVWTGPPT*QEAETSHPRLRSSH
Trigger: GTGGGAAGACCTCAGCCTTGGGTGGCTTGTCTCTGCTTCTTGCCAGGTGGGAGGGCCTGTCCACACCCTGGATCCCCGTACCACAGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR GCA 90 bp AGTGCTGGCATGGAGCACTGGGGCTTAAGCAAGCGCTTGGGTCCCTaGCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCCGAACG +
Preference number: 1 (lower is better)
Translates to: SAGMEHWGLSKRLGP*HRQGESCCTHGPRT
Trigger: CGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAGCCCCAGTGCTCCATGCCAGCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR GCA 90 bp GGCTTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATaGTGCACACATGGCCCCCGAACGGCACTTAGGGATTTGGCACAA +
Preference number: 1 (lower is better)
Translates to: GLSKRLGPCHRQGES*CTHGPRTALRDLAQ
Trigger: TTGTGCCAAATCCCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR CCA 90 bp TCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGCATGGAGCACTaGGGCTTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAG +
Preference number: 1 (lower is better)
Translates to: SVHQTPDSSSAGMEH*GLSKRLGPCHRQGE
Trigger: CTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAGCCCCAGTGCTCCATGCCAGCACTTGAACTGTCTGGGGTTTGATGGACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR GCA 90 bp TTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTaGACACATGGCCCCCGAACGGCACTTAGGGATTTGGCACAAAAA +
Preference number: 1 (lower is better)
Translates to: LSKRLGPCHRQGESC*THGPRTALRDLAQK
Trigger: TTTTTGTGCCAAATCCCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR GCA 90 bp AGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTaGTGGCATGGAGCACTGGGGCTTAAGCAAGCGCTTGGGTCCCTG +
Preference number: 1 (lower is better)
Translates to: RKFLSLCPSNPRQFK*WHGALGLKQALGSL
Trigger: CAGGGACCCAAGCGCTTGCTTAAGCCCCAGTGCTCCATGCCAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR TCA 90 bp GCAAGAAGCAGAGACAAGCCACCCAAGGCTGAGGTCTTCCCACTCTaGTCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTC +
Preference number: 1 (lower is better)
Translates to: ARSRDKPPKAEVFPL*STYTLTPTPWHQVV
Trigger: GACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAGAGTGGGAAGACCTCAGCCTTGGGTGGCTTGTCTCTGCTTCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR TCA 90 bp GGGACAGATCATGGGACTAAGATTTGGCACATGGAAACATTCTCCTaGAATATGGCCAAAGCTGGCTCCCCAGAGCTTCTCCCTCCTCTG +
Preference number: 1 (lower is better)
Translates to: GTDHGTKIWHMETFS*NMAKAGSPELLPPL
Trigger: CAGAGGAGGGAGAAGCTCTGGGGAGCCAGCTTTGGCCATATTTCAGGAGAATGTTTCCATGTGCCAAATCTTAGTCCCATGATCTGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR TCA 90 bp CCTCCTTCTGCCATGACTAATGAAGTACCTGATGGCCCATTTGGTTaGTGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGC +
Preference number: 1 (lower is better)
Translates to: PPSAMTNEVPDGPFG*CMKMPKGGITQKPG
Trigger: GCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAATGGGCCATCAGGTACTTCATTAGTCATGGCAGAAGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR CCA 90 bp TGCCCAGGACCAGTGCTGGGGATGCAGGTATTGCAAAGGCAAGCATaGAATAGGCACTCCTCATGCCTGTCTTTGTACAAAATATTGTAC +
Preference number: 1 (lower is better)
Translates to: CPGPVLGMQVLQRQA*NRHSSCLSLYKILY
Trigger: GTACAATATTTTGTACAAAGACAGGCATGAGGAGTGCCTATTCCATGCTTGCCTTTGCAATACCTGCATCCCCAGCACTGGTCCTGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR GCA 90 bp CCCCTTCCACTCCCAAACCTAGCAACTCTGGAAACCCTTCTCCTCTaGCTCTCTAGTCATTTCCAAGACAAAGTGATCTTCAAGCAAAAT +
Preference number: 1 (lower is better)
Translates to: PLPLPNLATLETLLL*LSSHFQDKVIFKQN
Trigger: ATTTTGCTTGAAGATCACTTTGTCTTGGAAATGACTAGAGAGGCAGAGGAGAAGGGTTTCCAGAGTTGCTAGGTTTGGGAGTGGAAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR GCA 90 bp GGGATGCAGGTATTGCAAAGGCAAGCATGGAATAGGCACTCCTCATaGCTGTCTTTGTACAAAATATTGTACAAAATATTCCCAGGAAAA +
Preference number: 1 (lower is better)
Translates to: GMQVLQRQAWNRHSS*LSLYKILYKIFPGK
Trigger: TTTTCCTGGGAATATTTTGTACAATATTTTGTACAAAGACAGGCATGAGGAGTGCCTATTCCATGCTTGCCTTTGCAATACCTGCATCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CCA 90 bp CTTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACAGGAGGGACACCTGGCTaGGGTGGGGAAGTGCCCAGG +
Preference number: 2 (lower is better)
Translates to: LKQALGSLPQTGRVMLHTGGTPG*GGEVPR
Trigger: CCTGGGCACTTCCCCACCCCAGCCAGGTGTCCCTCC...TGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR GCA 90 bp CTTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACACAGCCCTGGCCGGCCTaGTCTTTGGCACCTGCAGGT +
Preference number: 2 (lower is better)
Translates to: LKQALGSLPQTGRVMLHTQPWPA*SLAPAG
Trigger: ACCTGCAGGTGCCAAAGAGCAGGCCGGCCAGGGCTG...TGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CCA 90 bp AACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGGGGAGCTAGACACCTGGCTGGGGTaGGGAAGTGCCCAGGACCAG +
Preference number: 2 (lower is better)
Translates to: NLLTLLPALKASQGTGELDTWLG*GSAQDQ
Trigger: CTGGTCCTGGGCACTTCCCCACCCCAGCCAGGTGTC...TAGCTCCCCAGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR TCA 90 bp AACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGGGGAGCTACCTGGGGTGGAGAGCTaGGGAGCAGGAGCACAAGGA +
Preference number: 2 (lower is better)
Translates to: NLLTLLPALKASQGTGELPGVES*GAGAQG
Trigger: TCCTTGTGCTCCTGCTCCTCAGCTCTCCACCCCAGG...TAGCTCCCCAGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR GCA 90 bp TGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCCGAACGGCACTTAGGAGTGCCCAGGACCAGTaGTGGGGATGCAGGTATTGC +
Preference number: 2 (lower is better)
Translates to: CHRQGESCCTHGPRTALRSAQDQ*WGCRYC
Trigger: GCAATACCTGCATCCCCAGCACTGGTCCTGGGCACT...CCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR GCA 90 bp TGTCCCAGGACACTATCTGGGGAAGCCAGGAAATTCCTCAGCCTCTGTCCATCAGCTGGGGTGGGGAAGTaGCCAGGACCAGTGCTGGGG +
Preference number: 2 (lower is better)
Translates to: CPRTLSGEARKFLSLCPSAGVGK*PGPVLG
Trigger: CCCCAGCACTGGTCCTGGGCACTTCCCCACCCCAGC...TGATGGACAGAGGCTGAGGAATTTCCTGGCTTCCCCAGATAGTGTCCTGGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR GCA 90 bp CCCGAACGGCACTTAGGGATTTGGCACAAAAAGGACTCCTCTCCCTCCTTTTGCGCTGGGGTGGGGAAGTaGCCAGGACCAGTGCTGGGG +
Preference number: 2 (lower is better)
Translates to: PERHLGIWHKKDSSPSFCAGVGK*PGPVLG
Trigger: CCCCAGCACTGGTCCTGGGCACTTCCCCACCCCAGC...GCAAAAGGAGGGAGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGTTCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR GCA 90 bp CTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGCTGGGGTGGGGAAGTaGCCAGGACCAGTGCTGGGG +
Preference number: 2 (lower is better)
Translates to: LEFNLLTLLPALKASQGTAGVGK*PGPVLG
Trigger: CCCCAGCACTGGTCCTGGGCACTTCCCCACCCCAGC...AGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR CAA 90 bp GACAGTTCAAGTGCTGGCATGGAGCACTGGGGCTTAAGCAAGCGCTaGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGC +
Preference number: 2 (lower is better)
Translates to: DSSSAGMEHWGLSKR*GPCHRQGESCCTHG
Trigger: GCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAGCCCCAGTGCTCCATGCCAGCACTTGAACTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR TCA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGCTTGGTCCCTTCAGCTaGATTTGTGGCTGGGCCCTG +
Preference number: 2 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWLGPFS*ICGWAL
Trigger: CAGGGCCCAGCCACAAATTCAGCTGAAGGGACCAAG...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR GCA 90 bp CTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGGTCTGGAGGCTCAGTaGCCCCTGCCACAGCTCCAC +
Preference number: 2 (lower is better)
Translates to: LEFNLLTLLPALKASQGTGLEAQ*PLPQLH
Trigger: GTGGAGCTGTGGCAGGGGGCACTGAGCCTCCAGACC...AGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR GCA 90 bp TGTCCCAGGACACTATCTGGGGAAGCCAGGAAATTCCTCAGCCTCTGTCCATCACAGCCCTGGCCGGCCTaGTCTTTGGCACCTGCAGGT +
Preference number: 2 (lower is better)
Translates to: CPRTLSGEARKFLSLCPSQPWPA*SLAPAG
Trigger: ACCTGCAGGTGCCAAAGAGCAGGCCGGCCAGGGCTG...TGATGGACAGAGGCTGAGGAATTTCCTGGCTTCCCCAGATAGTGTCCTGGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR GCA 90 bp TGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCCGAACGGCACTTAGGGGAAGAGATGCTCCATaGCCCCTTGTCAGCAGACAG +
Preference number: 2 (lower is better)
Translates to: CHRQGESCCTHGPRTALRGRDAP*PLVSRQ
Trigger: CTGTCTGCTGACAAGGGGGCATGGAGCATCTCTTCC...CCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CCA 90 bp AAGTTTAAGGTTCCTCTTCCCCACCCCGTAGTACCAGTATCCAGGTCCTCAGAGGGAGGGACACCTGGCTaGGGTGGGGAAGTGCCCAGG +
Preference number: 2 (lower is better)
Translates to: KFKVPLPHPVVPVSRSSEGGTPG*GGEVPR
Trigger: CCTGGGCACTTCCCCACCCCAGCCAGGTGTCCCTCC...CTCTGAGGACCTGGATACTGGTACTACGGGGTGGGGAAGAGGAACCTTAAACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CCA 90 bp TGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCCGAACGGCACTTAGGCCAACACCAGAGACTTaGGAGGGCAGGTTTGGGATC +
Preference number: 2 (lower is better)
Translates to: CHRQGESCCTHGPRTALRPTPET*EGRFGI
Trigger: GATCCCAAACCTGCCCTCCCAAGTCTCTGGTGTTGG...CCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR TCA 90 bp CTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTAGCACTGGGGCAGAGTaGCCTGATCTGGACCCCGAC +
Preference number: 2 (lower is better)
Translates to: LEFNLLTLLPALKASQGTSTGAE*PDLDPD
Trigger: GTCGGGGTCCAGATCAGGTCACTCTGCCCCAGTGCT...AGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR TCA 90 bp CCCGAACGGCACTTAGGGATTTGGCACAAAAAGGACTCCTCTCCCTCCTTTTGCCCTGGGGTGGAGAGCTaGGGAGCAGGAGCACAAGGA +
Preference number: 2 (lower is better)
Translates to: PERHLGIWHKKDSSPSFCPGVES*GAGAQG
Trigger: TCCTTGTGCTCCTGCTCCTCAGCTCTCCACCCCAGG...GCAAAAGGAGGGAGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGTTCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR GCA 90 bp AACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGGGGAGCTAAGTGCCCAGGACCAGTaGTGGGGATGCAGGTATTGC +
Preference number: 2 (lower is better)
Translates to: NLLTLLPALKASQGTGELSAQDQ*WGCRYC
Trigger: GCAATACCTGCATCCCCAGCACTGGTCCTGGGCACT...TAGCTCCCCAGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR GCA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGGGAAGAGATGCTCCATaGCCCCTTGTCAGCAGACAG +
Preference number: 2 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWGRDAP*PLVSRQ
Trigger: CTGTCTGCTGACAAGGGGGCATGGAGCATCTCTTCC...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR GCA 90 bp AACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGGGGAGCTACCCAGACAGTTCAAGTaGTGGCATGGAGCACTGGGG +
Preference number: 2 (lower is better)
Translates to: NLLTLLPALKASQGTGELPRQFK*WHGALG
Trigger: CCCCAGTGCTCCATGCCAGCACTTGAACTGTCTGGG...TAGCTCCCCAGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CCA 90 bp CCCGAACGGCACTTAGGGATTTGGCACAAAAAGGACTCCTCTCCCTCCTTTTGCAGACACCCCGTTCCCTaGAGCGTGCAGGAACTGGGG +
Preference number: 2 (lower is better)
Translates to: PERHLGIWHKKDSSPSFCRHPVP*SVQELG
Trigger: CCCCAGTTCCTGCACGCTCCAGGGAACGGGGTGTCT...GCAAAAGGAGGGAGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGTTCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR TCA 90 bp CTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGAGGGCAGACGAGCATaGTCCAAGCACAGCCTGCTG +
Preference number: 2 (lower is better)
Translates to: LEFNLLTLLPALKASQGTEGRRA*SKHSLL
Trigger: CAGCAGGCTGTGCTTGGATCATGCTCGTCTGCCCTC...AGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR TCA 90 bp GGGGAAGTGCCCAGGACCAGTGCTGGGGATGCAGGTATTGCAAAGGCAAGCATGCCTTGTTTTCCAGCTTaGGGGCAGACGAGCATGATC +
Preference number: 2 (lower is better)
Translates to: GEVPRTSAGDAGIAKASMPCFPA*GQTSMI
Trigger: GATCATGCTCGTCTGCCCTCAAGCTGGAAAACAAGG...CATGCTTGCCTTTGCAATACCTGCATCCCCAGCACTGGTCCTGGGCACTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR TCA 90 bp GGGAATCTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAACCTGGGGTGGAGAGCTaGGGAGCAGGAGCACAAGGA +
Preference number: 2 (lower is better)
Translates to: GNLEFNLLTLLPALKASQPGVES*GAGAQG
Trigger: TCCTTGTGCTCCTGCTCCTCAGCTCTCCACCCCAGG...TTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAGATTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR GCA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGACAGAGTCCACTCAATaGCCACCTTGGTCCCTTCAG +
Preference number: 2 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWTESTQ*PPWSLQ
Trigger: CTGAAGGGACCAAGGTGGGCATTGAGTGGACTCTGT...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR GCA 90 bp AGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGCATGGTCTGGAGGCTCAGTaGCCCCTGCCACAGCTCCAC +
Preference number: 2 (lower is better)
Translates to: RKFLSLCPSNPRQFKCWHGLEAQ*PLPQLH
Trigger: GTGGAGCTGTGGCAGGGGGCACTGAGCCTCCAGACC...ATGCCAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR GCA 90 bp TGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCCGAACGGCACTTAGGGTAGGCATGGCAAGCTaGCATTTTAATCCCTCAGGC +
Preference number: 2 (lower is better)
Translates to: CHRQGESCCTHGPRTALRVGMAS*HFNPSG
Trigger: GCCTGAGGGATTAAAATGGCAGCTTGCCATGCCTAC...CCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR GCA 90 bp AGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGCATCAGCCCTGGCCGGCCTaGTCTTTGGCACCTGCAGGT +
Preference number: 2 (lower is better)
Translates to: RKFLSLCPSNPRQFKCWHQPWPA*SLAPAG
Trigger: ACCTGCAGGTGCCAAAGAGCAGGCCGGCCAGGGCTG...ATGCCAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CCA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTGACACCTGGCTGGGGTaGGGAAGTGCCCAGGACCAG +
Preference number: 2 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPDTWLG*GSAQDQ
Trigger: CTGGTCCTGGGCACTTCCCCACCCCAGCCAGGTGTC...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CCA 90 bp CCCGAACGGCACTTAGGGATTTGGCACAAAAAGGACTCCTCTCCCTCCTTTTGCGGCCGGCCTGCTCTTTaGCACCTGCAGGTGAACTTC +
Preference number: 2 (lower is better)
Translates to: PERHLGIWHKKDSSPSFCGRPAL*HLQVNF
Trigger: GAAGTTCACCTGCAGGTGCCAAAGAGCAGGCCGGCC...GCAAAAGGAGGGAGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGTTCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CCA 90 bp CTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTAGAGGCAACCTGGGGTaGAGAGCTGAGGAGCAGGAG +
Preference number: 2 (lower is better)
Translates to: LEFNLLTLLPALKASQGTRGNLG*RAEEQE
Trigger: CTCCTGCTCCTCAGCTCTCCACCCCAGGTTGCCTCT...AGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CCA 90 bp CTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTAGGAGAGAGGCAACCTaGGGTGGAGAGCTGAGGAGC +
Preference number: 2 (lower is better)
Translates to: LEFNLLTLLPALKASQGTRREAT*GGELRS
Trigger: GCTCCTCAGCTCTCCACCCCAGGTTGCCTCTCTCCT...AGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR TCA 90 bp CTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTCTTGGTCCCTTCAGCTaGATTTGTGGCTGGGCCCTG +
Preference number: 2 (lower is better)
Translates to: LEFNLLTLLPALKASQGTLGPFS*ICGWAL
Trigger: CAGGGCCCAGCCACAAATTCAGCTGAAGGGACCAAG...AGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR TCA 90 bp AACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGGGGAGCTACCTTGTTTTCCAGCTTaGGGGCAGACGAGCATGATC +
Preference number: 2 (lower is better)
Translates to: NLLTLLPALKASQGTGELPCFPA*GQTSMI
Trigger: GATCATGCTCGTCTGCCCTCAAGCTGGAAAACAAGG...TAGCTCCCCAGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR TCA 90 bp CTTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACACCTTGTTTTCCAGCTTaGGGGCAGACGAGCATGATC +
Preference number: 2 (lower is better)
Translates to: LKQALGSLPQTGRVMLHTPCFPA*GQTSMI
Trigger: GATCATGCTCGTCTGCCCTCAAGCTGGAAAACAAGG...TGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR TCA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTAGCACTGGGGCAGAGTaGCCTGATCTGGACCCCGAC +
Preference number: 2 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPSTGAE*PDLDPD
Trigger: GTCGGGGTCCAGATCAGGTCACTCTGCCCCAGTGCT...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR TCA 90 bp AGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGCATAGCACTGGGGCAGAGTaGCCTGATCTGGACCCCGAC +
Preference number: 2 (lower is better)
Translates to: RKFLSLCPSNPRQFKCWHSTGAE*PDLDPD
Trigger: GTCGGGGTCCAGATCAGGTCACTCTGCCCCAGTGCT...ATGCCAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR GCA 90 bp GGGAATCTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAACCCTCCTCTGCTCTGTaGATAGGAGGGACACCTGGC +
Preference number: 2 (lower is better)
Translates to: GNLEFNLLTLLPALKASQPSSAL*IGGTPG
Trigger: GCCAGGTGTCCCTCCTATGCACAGAGCAGAGGAGGG...TTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAGATTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR GCA 90 bp CTTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACACAGAAGAGGAAGAGATaGTCCATGCCCCCTTGTCAG +
Preference number: 2 (lower is better)
Translates to: LKQALGSLPQTGRVMLHTQKRKR*SMPPCQ
Trigger: CTGACAAGGGGGCATGGAGCATCTCTTCCTCTTCTG...TGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR GCA 90 bp GGGAATCTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAACAGGGAGAGTCATGCTaGACACATGGCCCCCGAACG +
Preference number: 2 (lower is better)
Translates to: GNLEFNLLTLLPALKASQQGESC*THGPRT
Trigger: CGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTG...TTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAGATTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR GCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGCAGGGAGAGTCATGCTaGACACATGGCCCCCGAACG +
Preference number: 2 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLQGESC*THGPRT
Trigger: CGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTG...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR GCA 90 bp TGTCCCAGGACACTATCTGGGGAAGCCAGGAAATTCCTCAGCCTCTGTCCATCAAGACAGGGAGAGTCATaGTGCACACATGGCCCCCGA +
Preference number: 2 (lower is better)
Translates to: CPRTLSGEARKFLSLCPSRQGES*CTHGPR
Trigger: TCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCT...TGATGGACAGAGGCTGAGGAATTTCCTGGCTTCCCCAGATAGTGTCCTGGGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR GCA 90 bp TGTCCCAGGACACTATCTGGGGAAGCCAGGAAATTCCTCAGCCTCTGTCCATCAAAGCGCTTGGGTCCCTaGCACAGACAGGGAGAGTCA +
Preference number: 2 (lower is better)
Translates to: CPRTLSGEARKFLSLCPSKRLGP*HRQGES
Trigger: TGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTT...TGATGGACAGAGGCTGAGGAATTTCCTGGCTTCCCCAGATAGTGTCCTGGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR GCA 90 bp TGTCCCAGGACACTATCTGGGGAAGCCAGGAAATTCCTCAGCCTCTGTCCATCACCCAGACAGTTCAAGTaGTGGCATGGAGCACTGGGG +
Preference number: 2 (lower is better)
Translates to: CPRTLSGEARKFLSLCPSPRQFK*WHGALG
Trigger: CCCCAGTGCTCCATGCCAGCACTTGAACTGTCTGGG...TGATGGACAGAGGCTGAGGAATTTCCTGGCTTCCCCAGATAGTGTCCTGGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR GCA 90 bp CTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTCCCAGACAGTTCAAGTaGTGGCATGGAGCACTGGGG +
Preference number: 2 (lower is better)
Translates to: LEFNLLTLLPALKASQGTPRQFK*WHGALG
Trigger: CCCCAGTGCTCCATGCCAGCACTTGAACTGTCTGGG...AGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR GCA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTGAGGGGCAAGTGCACTaGCTGCCCCTTCCACTCCCA +
Preference number: 2 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPEGQVH*LPLPLP
Trigger: TGGGAGTGGAAGGGGCAGGCAGTGCACTTGCCCCTC...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CCA 90 bp CTTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACAGGATGTTCCCTTTTGTaGTTAGCAGGGTCTGGAGGC +
Preference number: 2 (lower is better)
Translates to: LKQALGSLPQTGRVMLHTGCSLL*LAGSGG
Trigger: GCCTCCAGACCCTGCTAACCACAAAAGGGAACATCC...TGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CCA 90 bp AACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGGGGAGCTACAAAGGCTGGAAGATTaGAGAGGGAACAGCCCTACC +
Preference number: 2 (lower is better)
Translates to: NLLTLLPALKASQGTGELQRLED*RGNSPT
Trigger: GGTAGGGCTGTTCCCTCTCCAATCTTCCAGCCTTTG...TAGCTCCCCAGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CCA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGCATTCTCCTGAAATATaGCCAAAGCTGGCTCCCCAG +
Preference number: 2 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWHSPEI*PKLAPQ
Trigger: CTGGGGAGCCAGCTTTGGCCATATTTCAGGAGAATG...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CCA 90 bp AGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGCATAGACACCCCGTTCCCTaGAGCGTGCAGGAACTGGGG +
Preference number: 2 (lower is better)
Translates to: RKFLSLCPSNPRQFKCWHRHPVP*SVQELG
Trigger: CCCCAGTTCCTGCACGCTCCAGGGAACGGGGTGTCT...ATGCCAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGGCCGGCCTGCTCTTTaGCACCTGCAGGTGAACTTC +
Preference number: 2 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLGRPAL*HLQVNF
Trigger: GAAGTTCACCTGCAGGTGCCAAAGAGCAGGCCGGCC...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CCA 90 bp GGGAATCTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAACAGAGTGACCTGATCTaGACCCCGACGGGGTCCTCA +
Preference number: 2 (lower is better)
Translates to: GNLEFNLLTLLPALKASQQSDLI*TPTGSS
Trigger: TGAGGACCCCGTCGGGGTCCAGATCAGGTCACTCTG...TTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAGATTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGAGAGGCAACCTGGGGTaGAGAGCTGAGGAGCAGGAG +
Preference number: 2 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLRGNLG*RAEEQE
Trigger: CTCCTGCTCCTCAGCTCTCCACCCCAGGTTGCCTCT...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CCA 90 bp CTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGCTGGCATGGAGCACTaGGGCTTAAGCAAGCGCTTG +
Preference number: 2 (lower is better)
Translates to: LEFNLLTLLPALKASQGTAGMEH*GLSKRL
Trigger: CAAGCGCTTGCTTAAGCCCCAGTGCTCCATGCCAGC...AGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR CAA 90 bp ACGGCACTTAGGGATTTGGCACAAAAAGGACTCCTCTCCCTCCTTTaGCTACCACACCCCATCCCACTCCTGTGCAACCTGGGCATCTCT +
Preference number: 2 (lower is better)
Translates to: TALRDLAQKGLLSLL*LPHPIPLLCNLGIS
Trigger: AGAGATGCCCAGGTTGCACAGGAGTGGGATGGGGTGTGGTAGCAAAAGGAGGGAGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR TCA 90 bp AGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGCATGAGGGCAGACGAGCATaGTCCAAGCACAGCCTGCTG +
Preference number: 2 (lower is better)
Translates to: RKFLSLCPSNPRQFKCWHEGRRA*SKHSLL
Trigger: CAGCAGGCTGTGCTTGGATCATGCTCGTCTGCCCTC...ATGCCAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR TCA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCTTTCTCCATGCCCTaGCCCTTTTCTATTTGGCAA +
Preference number: 2 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWPFSMP*PFSIWQ
Trigger: TTGCCAAATAGAAAAGGGTCAGGGCATGGAGAAAGG...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR TCA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGTCTCTCTACATCCCCTaGAGTAGGAAACCCTGCTTT +
Preference number: 2 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWSLYIP*SRKPCF
Trigger: AAAGCAGGGTTTCCTACTTCAGGGGATGTAGAGAGA...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR GCA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTCCCTCCTCTGCTCTGTaGATAGGAGGGACACCTGGC +
Preference number: 2 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPPSSAL*IGGTPG
Trigger: GCCAGGTGTCCCTCCTATGCACAGAGCAGAGGAGGG...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR GCA 90 bp GGGAATCTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAAGACAGGGAGAGTCATaGTGCACACATGGCCCCCGA +
Preference number: 2 (lower is better)
Translates to: GNLEFNLLTLLPALKASQRQGES*CTHGPR
Trigger: TCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCT...TTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAGATTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CCA 90 bp CCCGAACGGCACTTAGGGATTTGGCACAAAAAGGACTCCTCTCCCTCCTTTTGCGCCCAGGACCAGTGCTaGGGATGCAGGTATTGCAAA +
Preference number: 2 (lower is better)
Translates to: PERHLGIWHKKDSSPSFCAQDQC*GCRYCK
Trigger: TTTGCAATACCTGCATCCCCAGCACTGGTCCTGGGC...GCAAAAGGAGGGAGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGTTCGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CCA 90 bp AGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGCATGGCCGGCCTGCTCTTTaGCACCTGCAGGTGAACTTC +
Preference number: 2 (lower is better)
Translates to: RKFLSLCPSNPRQFKCWHGRPAL*HLQVNF
Trigger: GAAGTTCACCTGCAGGTGCCAAAGAGCAGGCCGGCC...ATGCCAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CCA 90 bp CCCGAACGGCACTTAGGGATTTGGCACAAAAAGGACTCCTCTCCCTCCTTTTGCCCAACACCAGAGACTTaGGAGGGCAGGTTTGGGATC +
Preference number: 2 (lower is better)
Translates to: PERHLGIWHKKDSSPSFCPTPET*EGRFGI
Trigger: GATCCCAAACCTGCCCTCCCAAGTCTCTGGTGTTGG...GCAAAAGGAGGGAGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGTTCGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CCA 90 bp CCCGAACGGCACTTAGGGATTTGGCACAAAAAGGACTCCTCTCCCTCCTTTTGCCACTCCTGTGCAACCTaGGCATCTCTCTACATCCCC +
Preference number: 2 (lower is better)
Translates to: PERHLGIWHKKDSSPSFCHSCAT*ASLYIP
Trigger: GGGGATGTAGAGAGATGCCCAGGTTGCACAGGAGTG...GCAAAAGGAGGGAGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGTTCGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CCA 90 bp AAGTTTAAGGTTCCTCTTCCCCACCCCGTAGTACCAGTATCCAGGTCCTCAGAGGCTGGCATGGAGCACTaGGGCTTAAGCAAGCGCTTG +
Preference number: 2 (lower is better)
Translates to: KFKVPLPHPVVPVSRSSEAGMEH*GLSKRL
Trigger: CAAGCGCTTGCTTAAGCCCCAGTGCTCCATGCCAGC...CTCTGAGGACCTGGATACTGGTACTACGGGGTGGGGAAGAGGAACCTTAAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR CAA 90 bp GTCACTTGCATAATCCTCTCGGTAGGTAGCCCCTTGTTTTCCAGCTaGAGGGCAGACGAGCATGATCCAAGCACAGCCTGCTGGGATGTT +
Preference number: 2 (lower is better)
Translates to: VTCIILSVGSPLFSS*RADEHDPSTACWDV
Trigger: AACATCCCAGCAGGCTGTGCTTGGATCATGCTCGTCTGCCCTCAAGCTGGAAAACAAGGGGCTACCTACCGAGAGGATTATGCAAGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR TCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGTTTTCACAGTACCAGTaGGGCCAGACACCCCGTTCC +
Preference number: 2 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLFSQYQ*GQTPRS
Trigger: GGAACGGGGTGTCTGGCCTCACTGGTACTGTGAAAA...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR GCA 90 bp CCCGAACGGCACTTAGGGATTTGGCACAAAAAGGACTCCTCTCCCTCCTTTTGCACAGAGTCCACTCAATaGCCACCTTGGTCCCTTCAG +
Preference number: 2 (lower is better)
Translates to: PERHLGIWHKKDSSPSFCTESTQ*PPWSLQ
Trigger: CTGAAGGGACCAAGGTGGGCATTGAGTGGACTCTGT...GCAAAAGGAGGGAGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGTTCGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR GCA 90 bp CCCGAACGGCACTTAGGGATTTGGCACAAAAAGGACTCCTCTCCCTCCTTTTGCGACCAGTGCTGGGGATaGAGGTATTGCAAAGGCAAG +
Preference number: 2 (lower is better)
Translates to: PERHLGIWHKKDSSPSFCDQCWG*RYCKGK
Trigger: CTTGCCTTTGCAATACCTGCATCCCCAGCACTGGTC...GCAAAAGGAGGGAGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGTTCGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR GCA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTAGTGCCCAGGACCAGTaGTGGGGATGCAGGTATTGC +
Preference number: 2 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPSAQDQ*WGCRYC
Trigger: GCAATACCTGCATCCCCAGCACTGGTCCTGGGCACT...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR GCA 90 bp CCCGAACGGCACTTAGGGATTTGGCACAAAAAGGACTCCTCTCCCTCCTTTTGCCAGAAGAGGAAGAGATaGTCCATGCCCCCTTGTCAG +
Preference number: 2 (lower is better)
Translates to: PERHLGIWHKKDSSPSFCQKRKR*SMPPCQ
Trigger: CTGACAAGGGGGCATGGAGCATCTCTTCCTCTTCTG...GCAAAAGGAGGGAGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGTTCGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR GCA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGGGTCACCTTTCTCCATaGCCTGACCCTTTTCTATTT +
Preference number: 2 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWGHLSP*PDPFLF
Trigger: AAATAGAAAAGGGTCAGGGCATGGAGAAAGGTGACC...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CCA 90 bp CTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTCCAAGCACAGCCTGCTaGGATGTTCCCTTTTGTGGT +
Preference number: 2 (lower is better)
Translates to: LEFNLLTLLPALKASQGTPSTAC*DVPFCG
Trigger: ACCACAAAAGGGAACATCCCAGCAGGCTGTGCTTGG...AGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CCA 90 bp CCCGAACGGCACTTAGGGATTTGGCACAAAAAGGACTCCTCTCCCTCCTTTTGCCAAAGGCTGGAAGATTaGAGAGGGAACAGCCCTACC +
Preference number: 2 (lower is better)
Translates to: PERHLGIWHKKDSSPSFCQRLED*RGNSPT
Trigger: GGTAGGGCTGTTCCCTCTCCAATCTTCCAGCCTTTG...GCAAAAGGAGGGAGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGTTCGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGCCCAGGACCAGTGCTaGGGATGCAGGTATTGCAAA +
Preference number: 2 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLAQDQC*GCRYCK
Trigger: TTTGCAATACCTGCATCCCCAGCACTGGTCCTGGGC...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CCA 90 bp GGGAATCTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAACACTCCTGTGCAACCTaGGCATCTCTCTACATCCCC +
Preference number: 2 (lower is better)
Translates to: GNLEFNLLTLLPALKASQHSCAT*ASLYIP
Trigger: GGGGATGTAGAGAGATGCCCAGGTTGCACAGGAGTG...TTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAGATTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR TCA 90 bp CTTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACAATGGAAACATTCTCCTaGAATATGGCCAAAGCTGGC +
Preference number: 2 (lower is better)
Translates to: LKQALGSLPQTGRVMLHTMETFS*NMAKAG
Trigger: GCCAGCTTTGGCCATATTTCAGGAGAATGTTTCCAT...TGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR TCA 90 bp AGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGCATTTTTCACAGTACCAGTaGGGCCAGACACCCCGTTCC +
Preference number: 2 (lower is better)
Translates to: RKFLSLCPSNPRQFKCWHFSQYQ*GQTPRS
Trigger: GGAACGGGGTGTCTGGCCTCACTGGTACTGTGAAAA...ATGCCAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR GCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGACAGAGTCCACTCAATaGCCACCTTGGTCCCTTCAG +
Preference number: 2 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLTESTQ*PPWSLQ
Trigger: CTGAAGGGACCAAGGTGGGCATTGAGTGGACTCTGT...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR GCA 90 bp TGTCCCAGGACACTATCTGGGGAAGCCAGGAAATTCCTCAGCCTCTGTCCATCAGATCCAAGCACAGCCTaGTGGGATGTTCCCTTTTGT +
Preference number: 2 (lower is better)
Translates to: CPRTLSGEARKFLSLCPSDPSTA*WDVPFC
Trigger: ACAAAAGGGAACATCCCAGCAGGCTGTGCTTGGATC...TGATGGACAGAGGCTGAGGAATTTCCTGGCTTCCCCAGATAGTGTCCTGGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR GCA 90 bp AAGTTTAAGGTTCCTCTTCCCCACCCCGTAGTACCAGTATCCAGGTCCTCAGAGGACCAGTGCTGGGGATaGAGGTATTGCAAAGGCAAG +
Preference number: 2 (lower is better)
Translates to: KFKVPLPHPVVPVSRSSEDQCWG*RYCKGK
Trigger: CTTGCCTTTGCAATACCTGCATCCCCAGCACTGGTC...CTCTGAGGACCTGGATACTGGTACTACGGGGTGGGGAAGAGGAACCTTAAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR GCA 90 bp AACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGGGGAGCTAGGTCACCTTTCTCCATaGCCTGACCCTTTTCTATTT +
Preference number: 2 (lower is better)
Translates to: NLLTLLPALKASQGTGELGHLSP*PDPFLF
Trigger: AAATAGAAAAGGGTCAGGGCATGGAGAAAGGTGACC...TAGCTCCCCAGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR GCA 90 bp AGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGCATCCCATCCCACTCCTGTaGAACCTGGGCATCTCTCTA +
Preference number: 2 (lower is better)
Translates to: RKFLSLCPSNPRQFKCWHPIPLL*NLGISL
Trigger: TAGAGAGATGCCCAGGTTGCACAGGAGTGGGATGGG...ATGCCAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGGATGTTCCCTTTTGTaGTTAGCAGGGTCTGGAGGC +
Preference number: 2 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLGCSLL*LAGSGG
Trigger: GCCTCCAGACCCTGCTAACCACAAAAGGGAACATCC...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CCA 90 bp GGGAATCTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAACCAAGCACAGCCTGCTaGGATGTTCCCTTTTGTGGT +
Preference number: 2 (lower is better)
Translates to: GNLEFNLLTLLPALKASQPSTAC*DVPFCG
Trigger: ACCACAAAAGGGAACATCCCAGCAGGCTGTGCTTGG...TTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAGATTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGCAAAGGCTGGAAGATTaGAGAGGGAACAGCCCTACC +
Preference number: 2 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLQRLED*RGNSPT
Trigger: GGTAGGGCTGTTCCCTCTCCAATCTTCCAGCCTTTG...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CCA 90 bp AAGTTTAAGGTTCCTCTTCCCCACCCCGTAGTACCAGTATCCAGGTCCTCAGAGCCTGCTCCCAAAGGCTaGAAGATTGGAGAGGGAACA +
Preference number: 2 (lower is better)
Translates to: KFKVPLPHPVVPVSRSSEPAPKG*KIGEGT
Trigger: TGTTCCCTCTCCAATCTTCCAGCCTTTGGGAGCAGG...CTCTGAGGACCTGGATACTGGTACTACGGGGTGGGGAAGAGGAACCTTAAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGCCTGCTCCCAAAGGCTaGAAGATTGGAGAGGGAACA +
Preference number: 2 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLPAPKG*KIGEGT
Trigger: TGTTCCCTCTCCAATCTTCCAGCCTTTGGGAGCAGG...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CCA 90 bp TGTCCCAGGACACTATCTGGGGAAGCCAGGAAATTCCTCAGCCTCTGTCCATCACCCTTTGTTCCCCTTTaGGGACAGATCATGGGACTA +
Preference number: 2 (lower is better)
Translates to: CPRTLSGEARKFLSLCPSPFVPL*GQIMGL
Trigger: TAGTCCCATGATCTGTCCCCAAAGGGGAACAAAGGG...TGATGGACAGAGGCTGAGGAATTTCCTGGCTTCCCCAGATAGTGTCCTGGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CCA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTACACTCCTGTGCAACCTaGGCATCTCTCTACATCCCC +
Preference number: 2 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLHSCAT*ASLYIP
Trigger: GGGGATGTAGAGAGATGCCCAGGTTGCACAGGAGTG...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR TCA 90 bp CTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTTCTCTCTACATCCCCTaGAGTAGGAAACCCTGCTTT +
Preference number: 2 (lower is better)
Translates to: LEFNLLTLLPALKASQGTSLYIP*SRKPCF
Trigger: AAAGCAGGGTTTCCTACTTCAGGGGATGTAGAGAGA...AGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR GCA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGAGAAAGAAAGTCACTTaGATAATCCTCTCGGTAGGT +
Preference number: 2 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWRKKVT*IILSVG
Trigger: ACCTACCGAGAGGATTATGCAAGTGACTTTCTTTCT...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR GCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGTAGGCATGGCAAGCTaGCATTTTAATCCCTCAGGC +
Preference number: 2 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLVGMAS*HFNPSG
Trigger: GCCTGAGGGATTAAAATGGCAGCTTGCCATGCCTAC...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR GCA 90 bp AGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGCATCAGAAGAGGAAGAGATaGTCCATGCCCCCTTGTCAG +
Preference number: 2 (lower is better)
Translates to: RKFLSLCPSNPRQFKCWHQKRKR*SMPPCQ
Trigger: CTGACAAGGGGGCATGGAGCATCTCTTCCTCTTCTG...ATGCCAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CCA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTACCAAGCACAGCCTGCTaGGATGTTCCCTTTTGTGGT +
Preference number: 2 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLPSTAC*DVPFCG
Trigger: ACCACAAAAGGGAACATCCCAGCAGGCTGTGCTTGG...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CCA 90 bp AGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGCATCCTGCTCCCAAAGGCTaGAAGATTGGAGAGGGAACA +
Preference number: 2 (lower is better)
Translates to: RKFLSLCPSNPRQFKCWHPAPKG*KIGEGT
Trigger: TGTTCCCTCTCCAATCTTCCAGCCTTTGGGAGCAGG...ATGCCAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CCA 90 bp TGTCCCAGGACACTATCTGGGGAAGCCAGGAAATTCCTCAGCCTCTGTCCATCATTGCAAAGGCAAGCATaGAATAGGCACTCCTCATGC +
Preference number: 2 (lower is better)
Translates to: CPRTLSGEARKFLSLCPSLQRQA*NRHSSC
Trigger: GCATGAGGAGTGCCTATTCCATGCTTGCCTTTGCAA...TGATGGACAGAGGCTGAGGAATTTCCTGGCTTCCCCAGATAGTGTCCTGGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CCA 90 bp GGGAATCTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAACATTCTCCTGAAATATaGCCAAAGCTGGCTCCCCAG +
Preference number: 2 (lower is better)
Translates to: GNLEFNLLTLLPALKASQHSPEI*PKLAPQ
Trigger: CTGGGGAGCCAGCTTTGGCCATATTTCAGGAGAATG...TTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAGATTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CCA 90 bp GGGAATCTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAACCCTTTGTTCCCCTTTaGGGACAGATCATGGGACTA +
Preference number: 2 (lower is better)
Translates to: GNLEFNLLTLLPALKASQPFVPL*GQIMGL
Trigger: TAGTCCCATGATCTGTCCCCAAAGGGGAACAAAGGG...TTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAGATTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR CAA 90 bp GTAAGAAAGAAAGTCACTTGCATAATCCTCTCGGTAGGTAGCCCCTaGTTTTCCAGCTTGAGGGCAGACGAGCATGATCCAAGCACAGCC +
Preference number: 2 (lower is better)
Translates to: VRKKVTCIILSVGSP*FSSLRADEHDPSTA
Trigger: GGCTGTGCTTGGATCATGCTCGTCTGCCCTCAAGCTGGAAAACAAGGGGCTACCTACCGAGAGGATTATGCAAGTGACTTTCTTTCTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR TCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGCACAGGCTTGCTCTCTaGGCATTTTTCACAGTACCA +
Preference number: 2 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLHRLAL*AFFTVP
Trigger: TGGTACTGTGAAAAATGCTCAGAGAGCAAGCCTGTG...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR TCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGTCTCTCTACATCCCCTaGAGTAGGAAACCCTGCTTT +
Preference number: 2 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLSLYIP*SRKPCF
Trigger: AAAGCAGGGTTTCCTACTTCAGGGGATGTAGAGAGA...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR TCA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTAGATGGCCCATTTGGTTaGTGCATGAAGATGCCCAAG +
Preference number: 2 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLDGPFG*CMKMPK
Trigger: CTTGGGCATCTTCATGCATCAACCAAATGGGCCATC...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR TCA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTACCCCTCCTTCTGCCATaGCTAATGAAGTACCTGATG +
Preference number: 2 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLPLLLP*LMKYLM
Trigger: CATCAGGTACTTCATTAGTCATGGCAGAAGGAGGGG...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR GCA 90 bp AGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGCATGATCCAAGCACAGCCTaGTGGGATGTTCCCTTTTGT +
Preference number: 2 (lower is better)
Translates to: RKFLSLCPSNPRQFKCWHDPSTA*WDVPFC
Trigger: ACAAAAGGGAACATCCCAGCAGGCTGTGCTTGGATC...ATGCCAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR GCA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTAGTAGGCATGGCAAGCTaGCATTTTAATCCCTCAGGC +
Preference number: 2 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLVGMAS*HFNPSG
Trigger: GCCTGAGGGATTAAAATGGCAGCTTGCCATGCCTAC...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR GCA 90 bp GGGGAAGTGCCCAGGACCAGTGCTGGGGATGCAGGTATTGCAAAGGCAAGCATGAATAGGCACTCCTCATaGCTGTCTTTGTACAAAATA +
Preference number: 2 (lower is better)
Translates to: GEVPRTSAGDAGIAKASMNRHSS*LSLYKI
Trigger: TATTTTGTACAAAGACAGGCATGAGGAGTGCCTATT...CATGCTTGCCTTTGCAATACCTGCATCCCCAGCACTGGTCCTGGGCACTTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CCA 90 bp AAGTTTAAGGTTCCTCTTCCCCACCCCGTAGTACCAGTATCCAGGTCCTCAGAGTTGCAAAGGCAAGCATaGAATAGGCACTCCTCATGC +
Preference number: 2 (lower is better)
Translates to: KFKVPLPHPVVPVSRSSELQRQA*NRHSSC
Trigger: GCATGAGGAGTGCCTATTCCATGCTTGCCTTTGCAA...CTCTGAGGACCTGGATACTGGTACTACGGGGTGGGGAAGAGGAACCTTAAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CCA 90 bp GGGAATCTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAATTGCAAAGGCAAGCATaGAATAGGCACTCCTCATGC +
Preference number: 2 (lower is better)
Translates to: GNLEFNLLTLLPALKASQLQRQA*NRHSSC
Trigger: GCATGAGGAGTGCCTATTCCATGCTTGCCTTTGCAA...TTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAGATTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CCA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTACATTCTCCTGAAATATaGCCAAAGCTGGCTCCCCAG +
Preference number: 2 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLHSPEI*PKLAPQ
Trigger: CTGGGGAGCCAGCTTTGGCCATATTTCAGGAGAATG...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CCA 90 bp AGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGCATCCCTTTGTTCCCCTTTaGGGACAGATCATGGGACTA +
Preference number: 2 (lower is better)
Translates to: RKFLSLCPSNPRQFKCWHPFVPL*GQIMGL
Trigger: TAGTCCCATGATCTGTCCCCAAAGGGGAACAAAGGG...ATGCCAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CCA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTACTCAGGCTGAAGGCTaGGGAAAGCCAAGTTTAAGG +
Preference number: 2 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPTQAEG*GKPSLR
Trigger: CCTTAAACTTGGCTTTCCCCAGCCTTCAGCCTGAGT...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR TCA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTACCTTTCTCCATGCCCTaGCCCTTTTCTATTTGGCAA +
Preference number: 2 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLPFSMP*PFSIWQ
Trigger: TTGCCAAATAGAAAAGGGTCAGGGCATGGAGAAAGG...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR GCA 90 bp CTTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACAAATAGGCACTCCTCATaGCTGTCTTTGTACAAAATA +
Preference number: 2 (lower is better)
Translates to: LKQALGSLPQTGRVMLHTNRHSS*LSLYKI
Trigger: TATTTTGTACAAAGACAGGCATGAGGAGTGCCTATT...TGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CCA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTACGGCACTTAGGGATTTaGCACAAAAAGGACTCCTCT +
Preference number: 2 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLRHLGI*HKKDSS
Trigger: AGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCG...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR TCA 90 bp AAAGGCAAGCATGGAATAGGCACTCCTCATGCCTGTCTTTGTACAAAATATTGTCTTGGTCCCTTCAGCTaGATTTGTGGCTGGGCCCTG +
Preference number: 2 (lower is better)
Translates to: KGKHGIGTPHACLCTKYCLGPFS*ICGWAL
Trigger: CAGGGCCCAGCCACAAATTCAGCTGAAGGGACCAAG...ACAATATTTTGTACAAAGACAGGCATGAGGAGTGCCTATTCCATGCTTGCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR TCA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTATGGAAACATTCTCCTaGAATATGGCCAAAGCTGGC +
Preference number: 2 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPMETFS*NMAKAG
Trigger: GCCAGCTTTGGCCATATTTCAGGAGAATGTTTCCAT...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR TCA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTATACAGACAGAGAAACTaGGGCACCAACAAATTCAGG +
Preference number: 2 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLYRQRN*GTNKFR
Trigger: CCTGAATTTGTTGGTGCCTCAGTTTCTCTGTCTGTA...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR GCA 90 bp CTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTAGAAAGAAAGTCACTTaGATAATCCTCTCGGTAGGT +
Preference number: 2 (lower is better)
Translates to: LEFNLLTLLPALKASQGTRKKVT*IILSVG
Trigger: ACCTACCGAGAGGATTATGCAAGTGACTTTCTTTCT...AGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR GCA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTGAAACCCTTCTCCTCTaGCTCTCTAGTCATTTCCAA +
Preference number: 2 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPETLLL*LSSHFQ
Trigger: TTGGAAATGACTAGAGAGGCAGAGGAGAAGGGTTTC...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR GCA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTAGAAAGAAAGTCACTTaGATAATCCTCTCGGTAGGT +
Preference number: 2 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPRKKVT*IILSVG
Trigger: ACCTACCGAGAGGATTATGCAAGTGACTTTCTTTCT...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR GCA 90 bp GGGAATCTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAAATAGGCACTCCTCATaGCTGTCTTTGTACAAAATA +
Preference number: 2 (lower is better)
Translates to: GNLEFNLLTLLPALKASQNRHSS*LSLYKI
Trigger: TATTTTGTACAAAGACAGGCATGAGGAGTGCCTATT...TTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAGATTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR GCA 72 bp GGACCCCGACGGGGTCCTCAGATCAGAGTCTGGCACTaGCCCAGCCCTGGCCGGCCTGCTCTTTGGCACCTG +
Preference number: 3 (lower is better)
Translates to: GPRRGPQIRVWH*PSPGRPALWHL
Trigger: CAGGTGCCAAAGAGCAGGCCGGCCAGGGCTGGGGCAGTGCCAGACTCTGATCTGAGGACCCCGTCGGGGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR CCA 72 bp CCCTCCTCTGCTCTGTGCATAGGAGGGACACCTGGCTaGGGTGGGGAAGTGCCCAGGACCAGTGCTGGGGAT +
Preference number: 3 (lower is better)
Translates to: PSSALCIGGTPG*GGEVPRTSAGD
Trigger: ATCCCCAGCACTGGTCCTGGGCACTTCCCCACCCCAGCCAGGTGTCCCTCCTATGCACAGAGCAGAGGAGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR GCA 72 bp CGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTaGACACATGGCCCCCGAACGGCACTTAGGGATTTG +
Preference number: 3 (lower is better)
Translates to: RLGPCHRQGESC*THGPRTALRDL
Trigger: CAAATCCCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR GCA 72 bp AAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATaGTGCACACATGGCCCCCGAACGGCACTTAGGGAT +
Preference number: 3 (lower is better)
Translates to: KRLGPCHRQGES*CTHGPRTALRD
Trigger: ATCCCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CAA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGTGGCCGGCCTGCTCTTaGGCACCTGCAGGTGAACTT +
Preference number: 3 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWWPACS*APAGEL
Trigger: AAGTTCACCTGCAGGTGCCAAAGAGCAGGCCGGCCA...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR GCA 72 bp ATGGAGCACTGGGGCTTAAGCAAGCGCTTGGGTCCCTaGCACAGACAGGGAGAGTCATGCTGCACACATGGC +
Preference number: 3 (lower is better)
Translates to: MEHWGLSKRLGP*HRQGESCCTHG
Trigger: GCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAGCCCCAGTGCTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CAA 90 bp TGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCCGAACGGCACTTAGGCCAAAGGCTGGAAGATaGGAGAGGGAACAGCCCTAC +
Preference number: 3 (lower is better)
Translates to: CHRQGESCCTHGPRTALRPKAGR*EREQPY
Trigger: GTAGGGCTGTTCCCTCTCCAATCTTCCAGCCTTTGG...CCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CAA 90 bp TGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCCGAACGGCACTTAGGCCCTTGTTTTCCAGCTaGAGGGCAGACGAGCATGAT +
Preference number: 3 (lower is better)
Translates to: CHRQGESCCTHGPRTALRPLFSS*RADEHD
Trigger: ATCATGCTCGTCTGCCCTCAAGCTGGAAAACAAGGG...CCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CAA 90 bp GGGGAAGTGCCCAGGACCAGTGCTGGGGATGCAGGTATTGCAAAGGCAAGCATGCCAAAGGCTGGAAGATaGGAGAGGGAACAGCCCTAC +
Preference number: 3 (lower is better)
Translates to: GEVPRTSAGDAGIAKASMPKAGR*EREQPY
Trigger: GTAGGGCTGTTCCCTCTCCAATCTTCCAGCCTTTGG...CATGCTTGCCTTTGCAATACCTGCATCCCCAGCACTGGTCCTGGGCACTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CAA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGATGCTCCATGCCCCCTaGTCAGCAGACAGCAAGAGA +
Preference number: 3 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWMLHAP*SADSKR
Trigger: TCTCTTGCTGTCTGCTGACAAGGGGGCATGGAGCAT...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR CCA 72 bp CAAACCCCAGACAGTTCAAGTGCTGGCATGGAGCACTaGGGCTTAAGCAAGCGCTTGGGTCCCTGCCACAGA +
Preference number: 3 (lower is better)
Translates to: QTPDSSSAGMEH*GLSKRLGPCHR
Trigger: TCTGTGGCAGGGACCCAAGCGCTTGCTTAAGCCCCAGTGCTCCATGCCAGCACTTGAACTGTCTGGGGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CAA 90 bp TGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCCGAACGGCACTTAGGCACTCAATGCCCACCTaGGTCCCTTCAGCTGAATTT +
Preference number: 3 (lower is better)
Translates to: CHRQGESCCTHGPRTALRHSMPT*VPSAEF
Trigger: AAATTCAGCTGAAGGGACCAAGGTGGGCATTGAGTG...CCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CAA 90 bp CTTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACACTGTCAGAGGTCCCTTaGTTCCCCTTTGGGGACAGA +
Preference number: 3 (lower is better)
Translates to: LKQALGSLPQTGRVMLHTLSEVP*FPFGDR
Trigger: TCTGTCCCCAAAGGGGAACAAAGGGACCTCTGACAG...TGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CAA 90 bp CCCGAACGGCACTTAGGGATTTGGCACAAAAAGGACTCCTCTCCCTCCTTTTGCTGGCCGGCCTGCTCTTaGGCACCTGCAGGTGAACTT +
Preference number: 3 (lower is better)
Translates to: PERHLGIWHKKDSSPSFCWPACS*APAGEL
Trigger: AAGTTCACCTGCAGGTGCCAAAGAGCAGGCCGGCCA...GCAAAAGGAGGGAGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGTTCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CAA 90 bp TGTCCCAGGACACTATCTGGGGAAGCCAGGAAATTCCTCAGCCTCTGTCCATCAGGCTTAAGCAAGCGCTaGGGTCCCTGCCACAGACAG +
Preference number: 3 (lower is better)
Translates to: CPRTLSGEARKFLSLCPSGLSKR*GPCHRQ
Trigger: CTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAGCC...TGATGGACAGAGGCTGAGGAATTTCCTGGCTTCCCCAGATAGTGTCCTGGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CAA 90 bp CTTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATCCCTTTGTTCCCCTTaGGGGACAGATCATGGGACT +
Preference number: 3 (lower is better)
Translates to: LKQALGSLPQTGRVMLHTSLCSP*GTDHGT
Trigger: AGTCCCATGATCTGTCCCCAAAGGGGAACAAAGGGA...TGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CAA 90 bp CTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTCCCAACACCAGAGACTaGGGAGGGCAGGTTTGGGAT +
Preference number: 3 (lower is better)
Translates to: LEFNLLTLLPALKASQGTPNTRD*GGQVWD
Trigger: ATCCCAAACCTGCCCTCCCAAGTCTCTGGTGTTGGG...AGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR TCA 72 bp AGAGACAAGCCACCCAAGGCTGAGGTCTTCCCACTCTaGTCTACTTATACCCTCACCCCTACCCCATGGCAC +
Preference number: 3 (lower is better)
Translates to: RDKPPKAEVFPL*STYTLTPTPWH
Trigger: GTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAGAGTGGGAAGACCTCAGCCTTGGGTGGCTTGTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR GCA 72 bp CTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTaGTGGCATGGAGCACTGGGGCTTAAGCAAGCGCTT +
Preference number: 3 (lower is better)
Translates to: LSLCPSNPRQFK*WHGALGLKQAL
Trigger: AAGCGCTTGCTTAAGCCCCAGTGCTCCATGCCAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR GCA 72 bp CGTAGTACCAGTATCCAGGTCCTCAGAGGGATTCCATaGTACCCCAGCCCCAAAGCATACCATGTCCCAGGA +
Preference number: 3 (lower is better)
Translates to: RSTSIQVLRGIP*YPSPKAYHVPG
Trigger: TCCTGGGACATGGTATGCTTTGGGGCTGGGGTAGCATGGAATCCCTCTGAGGACCTGGATACTGGTACTACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR CCA 72 bp TTTCACAGTACCAGTGAGGCCAGACACCCCGTTCCCTaGAGCGTGCAGGAACTGGGGCTAAATCTAAGCTGT +
Preference number: 3 (lower is better)
Translates to: FHSTSEARHPVP*SVQELGLNLSC
Trigger: ACAGCTTAGATTTAGCCCCAGTTCCTGCACGCTCCAGGGAACGGGGTGTCTGGCCTCACTGGTACTGTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CAA 90 bp CCCGAACGGCACTTAGGGATTTGGCACAAAAAGGACTCCTCTCCCTCCTTTTGCTCGGTAGGTAGCCCCTaGTTTTCCAGCTTGAGGGCA +
Preference number: 3 (lower is better)
Translates to: PERHLGIWHKKDSSPSFCSVGSP*FSSLRA
Trigger: TGCCCTCAAGCTGGAAAACAAGGGGCTACCTACCGA...GCAAAAGGAGGGAGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGTTCGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CAA 90 bp CTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTTCGGTAGGTAGCCCCTaGTTTTCCAGCTTGAGGGCA +
Preference number: 3 (lower is better)
Translates to: LEFNLLTLLPALKASQGTSVGSP*FSSLRA
Trigger: TGCCCTCAAGCTGGAAAACAAGGGGCTACCTACCGA...AGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CAA 90 bp CCCGAACGGCACTTAGGGATTTGGCACAAAAAGGACTCCTCTCCCTCCTTTTGCCCAAAGGCTGGAAGATaGGAGAGGGAACAGCCCTAC +
Preference number: 3 (lower is better)
Translates to: PERHLGIWHKKDSSPSFCPKAGR*EREQPY
Trigger: GTAGGGCTGTTCCCTCTCCAATCTTCCAGCCTTTGG...GCAAAAGGAGGGAGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGTTCGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CAA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTTGGCCGGCCTGCTCTTaGGCACCTGCAGGTGAACTT +
Preference number: 3 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPWPACS*APAGEL
Trigger: AAGTTCACCTGCAGGTGCCAAAGAGCAGGCCGGCCA...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CAA 90 bp CTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTATGCTCCATGCCCCCTaGTCAGCAGACAGCAAGAGA +
Preference number: 3 (lower is better)
Translates to: LEFNLLTLLPALKASQGTMLHAP*SADSKR
Trigger: TCTCTTGCTGTCTGCTGACAAGGGGGCATGGAGCAT...AGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CAA 90 bp AAGTTTAAGGTTCCTCTTCCCCACCCCGTAGTACCAGTATCCAGGTCCTCAGAGCCCAACACCAGAGACTaGGGAGGGCAGGTTTGGGAT +
Preference number: 3 (lower is better)
Translates to: KFKVPLPHPVVPVSRSSEPNTRD*GGQVWD
Trigger: ATCCCAAACCTGCCCTCCCAAGTCTCTGGTGTTGGG...CTCTGAGGACCTGGATACTGGTACTACGGGGTGGGGAAGAGGAACCTTAAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR CCA 72 bp GCACATGGAAACATTCTCCTGAAATATGGCCAAAGCTaGCTCCCCAGAGCTTCTCCCTCCTCTGCTCTGTGC +
Preference number: 3 (lower is better)
Translates to: AHGNILLKYGQS*LPRASPSSALC
Trigger: GCACAGAGCAGAGGAGGGAGAAGCTCTGGGGAGCCAGCTTTGGCCATATTTCAGGAGAATGTTTCCATGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CAA 90 bp CTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTCTGGGATGTTCCCTTTaGTGGTTAGCAGGGTCTGGA +
Preference number: 3 (lower is better)
Translates to: LEFNLLTLLPALKASQGTLGCSL*WLAGSG
Trigger: TCCAGACCCTGCTAACCACAAAAGGGAACATCCCAG...AGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CAA 90 bp TGTCCCAGGACACTATCTGGGGAAGCCAGGAAATTCCTCAGCCTCTGTCCATCACTGGGATGTTCCCTTTaGTGGTTAGCAGGGTCTGGA +
Preference number: 3 (lower is better)
Translates to: CPRTLSGEARKFLSLCPSLGCSL*WLAGSG
Trigger: TCCAGACCCTGCTAACCACAAAAGGGAACATCCCAG...TGATGGACAGAGGCTGAGGAATTTCCTGGCTTCCCCAGATAGTGTCCTGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CAA 90 bp CTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTCCCTTGTTTTCCAGCTaGAGGGCAGACGAGCATGAT +
Preference number: 3 (lower is better)
Translates to: LEFNLLTLLPALKASQGTPLFSS*RADEHD
Trigger: ATCATGCTCGTCTGCCCTCAAGCTGGAAAACAAGGG...AGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CAA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTACCCAACACCAGAGACTaGGGAGGGCAGGTTTGGGAT +
Preference number: 3 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLPNTRD*GGQVWD
Trigger: ATCCCAAACCTGCCCTCCCAAGTCTCTGGTGTTGGG...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CAA 90 bp GGGGAAGTGCCCAGGACCAGTGCTGGGGATGCAGGTATTGCAAAGGCAAGCATGAAGAAAGAAAGTCACTaGCATAATCCTCTCGGTAGG +
Preference number: 3 (lower is better)
Translates to: GEVPRTSAGDAGIAKASMKKESH*HNPLGR
Trigger: CCTACCGAGAGGATTATGCAAGTGACTTTCTTTCTT...CATGCTTGCCTTTGCAATACCTGCATCCCCAGCACTGGTCCTGGGCACTTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CAA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGTCCCTTTGTTCCCCTTaGGGGACAGATCATGGGACT +
Preference number: 3 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLSLCSP*GTDHGT
Trigger: AGTCCCATGATCTGTCCCCAAAGGGGAACAAAGGGA...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CAA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTAATGCTCCATGCCCCCTaGTCAGCAGACAGCAAGAGA +
Preference number: 3 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLMLHAP*SADSKR
Trigger: TCTCTTGCTGTCTGCTGACAAGGGGGCATGGAGCAT...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CAA 90 bp AACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGGGGAGCTACTGACCCTTTTCTATTaGGCAACAGAAGAGGAAGAG +
Preference number: 3 (lower is better)
Translates to: NLLTLLPALKASQGTGELLTLFY*ATEEEE
Trigger: CTCTTCCTCTTCTGTTGCCAAATAGAAAAGGGTCAG...TAGCTCCCCAGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CAA 90 bp TGTCCCAGGACACTATCTGGGGAAGCCAGGAAATTCCTCAGCCTCTGTCCATCAACGGCACTTAGGGATTaGGCACAAAAAGGACTCCTC +
Preference number: 3 (lower is better)
Translates to: CPRTLSGEARKFLSLCPSTALRD*AQKGLL
Trigger: GAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGT...TGATGGACAGAGGCTGAGGAATTTCCTGGCTTCCCCAGATAGTGTCCTGGGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CAA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTCCCTTGTTTTCCAGCTaGAGGGCAGACGAGCATGAT +
Preference number: 3 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPPLFSS*RADEHD
Trigger: ATCATGCTCGTCTGCCCTCAAGCTGGAAAACAAGGG...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CAA 90 bp AACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGGGGAGCTAAAGAAAGAAAGTCACTaGCATAATCCTCTCGGTAGG +
Preference number: 3 (lower is better)
Translates to: NLLTLLPALKASQGTGELKKESH*HNPLGR
Trigger: CCTACCGAGAGGATTATGCAAGTGACTTTCTTTCTT...TAGCTCCCCAGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CAA 90 bp AGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGCATTCCCTTTGTTCCCCTTaGGGGACAGATCATGGGACT +
Preference number: 3 (lower is better)
Translates to: RKFLSLCPSNPRQFKCWHSLCSP*GTDHGT
Trigger: AGTCCCATGATCTGTCCCCAAAGGGGAACAAAGGGA...ATGCCAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CAA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTACACTCAATGCCCACCTaGGTCCCTTCAGCTGAATTT +
Preference number: 3 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLHSMPT*VPSAEF
Trigger: AAATTCAGCTGAAGGGACCAAGGTGGGCATTGAGTG...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CAA 90 bp AGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGCATCACTCAATGCCCACCTaGGTCCCTTCAGCTGAATTT +
Preference number: 3 (lower is better)
Translates to: RKFLSLCPSNPRQFKCWHHSMPT*VPSAEF
Trigger: AAATTCAGCTGAAGGGACCAAGGTGGGCATTGAGTG...ATGCCAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CAA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTTCCCCACACACAGGCTaGCTCTCTGAGCATTTTTCA +
Preference number: 3 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPSPHTG*LSEHFS
Trigger: TGAAAAATGCTCAGAGAGCAAGCCTGTGTGTGGGGA...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CAA 90 bp AGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGCATTCCCCACACACAGGCTaGCTCTCTGAGCATTTTTCA +
Preference number: 3 (lower is better)
Translates to: RKFLSLCPSNPRQFKCWHSPHTG*LSEHFS
Trigger: TGAAAAATGCTCAGAGAGCAAGCCTGTGTGTGGGGA...ATGCCAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CAA 90 bp TGTCCCAGGACACTATCTGGGGAAGCCAGGAAATTCCTCAGCCTCTGTCCATCAAAGAAAGAAAGTCACTaGCATAATCCTCTCGGTAGG +
Preference number: 3 (lower is better)
Translates to: CPRTLSGEARKFLSLCPSKKESH*HNPLGR
Trigger: CCTACCGAGAGGATTATGCAAGTGACTTTCTTTCTT...TGATGGACAGAGGCTGAGGAATTTCCTGGCTTCCCCAGATAGTGTCCTGGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR-3UTR CAA 90 bp GGGAATCTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAACTGACCCTTTTCTATTaGGCAACAGAAGAGGAAGAG +
Preference number: 3 (lower is better)
Translates to: GNLEFNLLTLLPALKASQLTLFY*ATEEEE
Trigger: CTCTTCCTCTTCTGTTGCCAAATAGAAAAGGGTCAG...TTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAGATTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR TCA 72 bp CATGGGACTAAGATTTGGCACATGGAAACATTCTCCTaGAATATGGCCAAAGCTGGCTCCCCAGAGCTTCTC +
Preference number: 3 (lower is better)
Translates to: HGTKIWHMETFS*NMAKAGSPELL
Trigger: GAGAAGCTCTGGGGAGCCAGCTTTGGCCATATTTCAGGAGAATGTTTCCATGTGCCAAATCTTAGTCCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp TGCCCCCTGCCACAGCTCCACCCAGTGAGCACAGAGTCCACTCAATGCCCACCTAGAGCGCCCCCGACCTaGACTGCCGCCAGGATGCCC +
Preference number: 4 (lower is better)
Translates to: CPLPQLHPVSTESTQCPPRAPPT*TAARMP
Trigger: GGGCATCCTGGCGGCAGTGCAGGTCGGGGGCGCTCT...AGGTGGGCATTGAGTGGACTCTGTGCTCACTGGGTGGAGCTGTGGCAGGGGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp TGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCCGAACGGCACTTAGGGGCCCGCAGAGGGGCTaGGCGGGTCTGCTGCGAGAG +
Preference number: 4 (lower is better)
Translates to: CHRQGESCCTHGPRTALRGPQRG*AGLLRE
Trigger: CTCTCGCAGCAGACCCGCGCAGCCCCTCTGCGGGCC...CCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp TGCCCCCTGCCACAGCTCCACCCAGTGAGCACAGAGTCCACTCAATGCCCACCTAGGATCGCCCACTCCTaGGCACCGCGTCGGGCGCCA +
Preference number: 4 (lower is better)
Translates to: CPLPQLHPVSTESTQCPPRIAHS*APRRAP
Trigger: TGGCGCCCGACGCGGTGCCCAGGAGTGGGCGATCCT...AGGTGGGCATTGAGTGGACTCTGTGCTCACTGGGTGGAGCTGTGGCAGGGGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp TGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCCGAACGGCACTTAGGGGCCGCCCCTCCGGATaGAGGCGTCATCCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: CHRQGESCCTHGPRTALRGRPSG*RRHPAR
Trigger: CCTGGCAGGATGACGCCTTCATCCGGAGGGGCGGCC...CCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp TGCCCCCTGCCACAGCTCCACCCAGTGAGCACAGAGTCCACTCAATGCCCACCTCCAGCAGCACCGCTGTaGGCAGCACCAGCACCGCCA +
Preference number: 4 (lower is better)
Translates to: CPLPQLHPVSTESTQCPPPAAPL*AAPAPP
Trigger: TGGCGGTGCTGGTGCTGCTCACAGCGGTGCTGCTGG...AGGTGGGCATTGAGTGGACTCTGTGCTCACTGGGTGGAGCTGTGGCAGGGGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp GGGGAAGTGCCCAGGACCAGTGCTGGGGATGCAGGTATTGCAAAGGCAAGCATGAGAGGCCCAGGCCGCTaGGGACGGCAGCCCGCATGC +
Preference number: 4 (lower is better)
Translates to: GEVPRTSAGDAGIAKASMRGPGR*GRQPAC
Trigger: GCATGCGGGCTGCCGTCCTCAGCGGCCTGGGCCTCT...CATGCTTGCCTTTGCAATACCTGCATCCCCAGCACTGGTCCTGGGCACTTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp GGGGAAGTGCCCAGGACCAGTGCTGGGGATGCAGGTATTGCAAAGGCAAGCATGGCTGCGCGGGTCTGCTaGGAGAGCGCCCCCGACCTG +
Preference number: 4 (lower is better)
Translates to: GEVPRTSAGDAGIAKASMAARVC*ESAPDL
Trigger: CAGGTCGGGGGCGCTCTCGCAGCAGACCCGCGCAGC...CATGCTTGCCTTTGCAATACCTGCATCCCCAGCACTGGTCCTGGGCACTTCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGGCTGCGCGGGTCTGCTaGGAGAGCGCCCCCGACCTG +
Preference number: 4 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWAARVC*ESAPDL
Trigger: CAGGTCGGGGGCGCTCTCGCAGCAGACCCGCGCAGC...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGGGGGGCCCGCAGGGGTaGGGCTGGGTGGCTCTGCAT +
Preference number: 4 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWGGPQG*GWVALH
Trigger: ATGCAGAGCCACCCAGCCCCACCCCTGCGGGCCCCC...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
66% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp TGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCCGAACGGCACTTAGGAGGATCGCCCACTCCTaGGCACCGCGTCGGGCGCCA +
Preference number: 4 (lower is better)
Translates to: CHRQGESCCTHGPRTALRRIAHS*APRRAP
Trigger: TGGCGCCCGACGCGGTGCCCAGGAGTGGGCGATCCT...CCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp GGGGAAGTGCCCAGGACCAGTGCTGGGGATGCAGGTATTGCAAAGGCAAGCATGAGCCACCTGCCCGAGTaGCACGGCGCCGCGAACGCT +
Preference number: 4 (lower is better)
Translates to: GEVPRTSAGDAGIAKASMSHLPE*HGAANA
Trigger: AGCGTTCGCGGCGCCGTGGCACTCGGGCAGGTGGCT...CATGCTTGCCTTTGCAATACCTGCATCCCCAGCACTGGTCCTGGGCACTTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGAGCCACCTGCCCGAGTaGCACGGCGCCGCGAACGCT +
Preference number: 4 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWSHLPE*HGAANA
Trigger: AGCGTTCGCGGCGCCGTGGCACTCGGGCAGGTGGCT...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGCGGGCGGGTGCGGCGTaGAAAGCCAGCAGCACCGCT +
Preference number: 4 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWRAGAA*KASSTA
Trigger: AGCGGTGCTGCTGGCTTTCCACGCCGCACCCGCCCG...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp TGCCCCCTGCCACAGCTCCACCCAGTGAGCACAGAGTCCACTCAATGCCCACCTCAGCCCGCATGCGGATaGGGAGGAGCGTGTAGGCGA +
Preference number: 4 (lower is better)
Translates to: CPLPQLHPVSTESTQCPPQPACG*GGACRR
Trigger: TCGCCTACACGCTCCTCCCCATCCGCATGCGGGCTG...AGGTGGGCATTGAGTGGACTCTGTGCTCACTGGGTGGAGCTGTGGCAGGGGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp TGCCCCCTGCCACAGCTCCACCCAGTGAGCACAGAGTCCACTCAATGCCCACCTGACACCTGGCTGGGGTaGGGAAGTGCCCAGGACCAG +
Preference number: 4 (lower is better)
Translates to: CPLPQLHPVSTESTQCPPDTWLG*GSAQDQ
Trigger: CTGGTCCTGGGCACTTCCCCACCCCAGCCAGGTGTC...AGGTGGGCATTGAGTGGACTCTGTGCTCACTGGGTGGAGCTGTGGCAGGGGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp TGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCCGAACGGCACTTAGGGCAGTGTTGCCCGAGTaGTGTGGATGCGGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: CHRQGESCCTHGPRTALRAVLPE*CGCGQP
Trigger: GGGCTGGCCGCATCCACATCACTCGGGCAACACTGC...CCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp GGGGAAGTGCCCAGGACCAGTGCTGGGGATGCAGGTATTGCAAAGGCAAGCATGGCTTCCGAGCCCCGATaGCACCTGCCACGACTGGGC +
Preference number: 4 (lower is better)
Translates to: GEVPRTSAGDAGIAKASMASEPR*HLPRLG
Trigger: GCCCAGTCGTGGCAGGTGTCATCGGGGCTCGGAAGC...CATGCTTGCCTTTGCAATACCTGCATCCCCAGCACTGGTCCTGGGCACTTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp GGGGAAGTGCCCAGGACCAGTGCTGGGGATGCAGGTATTGCAAAGGCAAGCATGGGACGGCAGCCCGCATaGGGATGGGGAGGAGCGTGT +
Preference number: 4 (lower is better)
Translates to: GEVPRTSAGDAGIAKASMGRQPA*GWGGAC
Trigger: ACACGCTCCTCCCCATCCGCATGCGGGCTGCCGTCC...CATGCTTGCCTTTGCAATACCTGCATCCCCAGCACTGGTCCTGGGCACTTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp TGCCCCCTGCCACAGCTCCACCCAGTGAGCACAGAGTCCACTCAATGCCCACCTTGCTGCCGATTCTCATaGTGCAGGTGGAGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: CPLPQLHPVSTESTQCPPCCRFS*CRWSRA
Trigger: GGCCCGGCTCCACCTGCAGCATGAGAATCGGCAGCA...AGGTGGGCATTGAGTGGACTCTGTGCTCACTGGGTGGAGCTGTGGCAGGGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp TGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCCGAACGGCACTTAGGCTCCTTGCCCTTGCCTaGGCCGCCCCTCCGGATGAA +
Preference number: 4 (lower is better)
Translates to: CHRQGESCCTHGPRTALRLLALA*AAPPDE
Trigger: TTCATCCGGAGGGGCGGCCCAGGCAAGGGCAAGGAG...CCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp CTTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACAAGGATCGCCCACTCCTaGGCACCGCGTCGGGCGCCA +
Preference number: 4 (lower is better)
Translates to: LKQALGSLPQTGRVMLHTRIAHS*APRRAP
Trigger: TGGCGCCCGACGCGGTGCCCAGGAGTGGGCGATCCT...TGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp TGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCCGAACGGCACTTAGGAGGTCCGTGGTCACCTaGATTCGGTCGGGGACCCCC +
Preference number: 4 (lower is better)
Translates to: CHRQGESCCTHGPRTALRRSVVT*IRSGTP
Trigger: GGGGGTCCCCGACCGAATCCAGGTGACCACGGACCT...CCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp AACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGGGGAGCTACCAGCAGCACCGCTGTaGGCAGCACCAGCACCGCCA +
Preference number: 4 (lower is better)
Translates to: NLLTLLPALKASQGTGELPAAPL*AAPAPP
Trigger: TGGCGGTGCTGGTGCTGCTCACAGCGGTGCTGCTGG...TAGCTCCCCAGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp CTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTAGAGGCCCAGGCCGCTaGGGACGGCAGCCCGCATGC +
Preference number: 4 (lower is better)
Translates to: LEFNLLTLLPALKASQGTRGPGR*GRQPAC
Trigger: GCATGCGGGCTGCCGTCCTCAGCGGCCTGGGCCTCT...AGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGGGGGCTGGGTGGCTCTaGATCCCGGAGGCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWGAGWL*IPEAAH
Trigger: ATGAGCTGCCTCCGGGATGCAGAGCCACCCAGCCCC...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp TGCCCCCTGCCACAGCTCCACCCAGTGAGCACAGAGTCCACTCAATGCCCACCTTTCGACTGGAACACCTaGACCAGACGGCGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: CPLPQLHPVSTESTQCPPFDWNT*TRRRQQ
Trigger: CTGCTGGCGCCGTCTGGTGCAGGTGTTCCAGTCGAA...AGGTGGGCATTGAGTGGACTCTGTGCTCACTGGGTGGAGCTGTGGCAGGGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp CTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGCTGCGCGGGTCTGCTaGGAGAGCGCCCCCGACCTG +
Preference number: 4 (lower is better)
Translates to: LEFNLLTLLPALKASQGTAARVC*ESAPDL
Trigger: CAGGTCGGGGGCGCTCTCGCAGCAGACCCGCGCAGC...AGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp CTTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACAGGACGGCAGCCCGCATaGGGATGGGGAGGAGCGTGT +
Preference number: 4 (lower is better)
Translates to: LKQALGSLPQTGRVMLHTGRQPA*GWGGAC
Trigger: ACACGCTCCTCCCCATCCGCATGCGGGCTGCCGTCC...TGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp GGGGAAGTGCCCAGGACCAGTGCTGGGGATGCAGGTATTGCAAAGGCAAGCATGGGTCTGGAGGCTCAGTaGCCCCTGCCACAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: GEVPRTSAGDAGIAKASMGLEAQ*PLPQLH
Trigger: GTGGAGCTGTGGCAGGGGGCACTGAGCCTCCAGACC...CATGCTTGCCTTTGCAATACCTGCATCCCCAGCACTGGTCCTGGGCACTTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp CTTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACAGCTGGGGTGGGGAAGTaGCCAGGACCAGTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LKQALGSLPQTGRVMLHTAGVGK*PGPVLG
Trigger: CCCCAGCACTGGTCCTGGGCACTTCCCCACCCCAGC...TGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp CTTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACAAGGGGTGGGGCTGGGTaGCTCTGCATCCCGGAGGCA +
Preference number: 4 (lower is better)
Translates to: LKQALGSLPQTGRVMLHTRGGAG*LCIPEA
Trigger: TGCCTCCGGGATGCAGAGCCACCCAGCCCCACCCCT...TGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp CTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGGGGGCCCGCAGGGGTaGGGCTGGGTGGCTCTGCAT +
Preference number: 4 (lower is better)
Translates to: LEFNLLTLLPALKASQGTGGPQG*GWVALH
Trigger: ATGCAGAGCCACCCAGCCCCACCCCTGCGGGCCCCC...AGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGGACACCTGGCTGGGGTaGGGAAGTGCCCAGGACCAG +
Preference number: 4 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWDTWLG*GSAQDQ
Trigger: CTGGTCCTGGGCACTTCCCCACCCCAGCCAGGTGTC...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp TGCCCCCTGCCACAGCTCCACCCAGTGAGCACAGAGTCCACTCAATGCCCACCTGGCCGGCCTGCTCTTTaGCACCTGCAGGTGAACTTC +
Preference number: 4 (lower is better)
Translates to: CPLPQLHPVSTESTQCPPGRPAL*HLQVNF
Trigger: GAAGTTCACCTGCAGGTGCCAAAGAGCAGGCCGGCC...AGGTGGGCATTGAGTGGACTCTGTGCTCACTGGGTGGAGCTGTGGCAGGGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp CTTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACACGGGGATCCAGGGTGTaGACAGGCCCTCCCACCTGG +
Preference number: 4 (lower is better)
Translates to: LKQALGSLPQTGRVMLHTRGSRV*TGPPTW
Trigger: CCAGGTGGGAGGGCCTGTCCACACCCTGGATCCCCG...TGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp TGCCCCCTGCCACAGCTCCACCCAGTGAGCACAGAGTCCACTCAATGCCCACCTGCATGGCTGGCACTGTaGTACGGGGATCCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: CPLPQLHPVSTESTQCPPAWLAL*YGDPGC
Trigger: ACACCCTGGATCCCCGTACCACAGTGCCAGCCATGC...AGGTGGGCATTGAGTGGACTCTGTGCTCACTGGGTGGAGCTGTGGCAGGGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGGGTTACACACCACCATaGGCCCCACGAACAGGGCGG +
Preference number: 4 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWGYTPP*APRTGR
Trigger: CCGCCCTGTTCGTGGGGCTCATGGTGGTGTGTAACC...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp TGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCCGAACGGCACTTAGGGCTCATTCAGGGTCATaGCCAGCTCCTGCGCAGTGC +
Preference number: 4 (lower is better)
Translates to: CHRQGESCCTHGPRTALRAHSGS*PAPAQC
Trigger: GCACTGCGCAGGAGCTGGTCATGACCCTGAATGAGC...CCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp CTTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACAGCAGTGTTGCCCGAGTaGTGTGGATGCGGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: LKQALGSLPQTGRVMLHTAVLPE*CGCGQP
Trigger: GGGCTGGCCGCATCCACATCACTCGGGCAACACTGC...TGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp TGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCCGAACGGCACTTAGGTGGTCCTTCCGCAGCTaGTCAATGCTGCGGGCATCG +
Preference number: 4 (lower is better)
Translates to: CHRQGESCCTHGPRTALRWSFRS*SMLRAS
Trigger: CGATGCCCGCAGCATTGATCAGCTGCGGAAGGACCA...CCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCTGGGGTGGAGAGCTaGGGAGCAGGAGCACAAGGA +
Preference number: 4 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWPGVES*GAGAQG
Trigger: TCCTTGTGCTCCTGCTCCTCAGCTCTCCACCCCAGG...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp CTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTAGCCACCTGCCCGAGTaGCACGGCGCCGCGAACGCT +
Preference number: 4 (lower is better)
Translates to: LEFNLLTLLPALKASQGTSHLPE*HGAANA
Trigger: AGCGTTCGCGGCGCCGTGGCACTCGGGCAGGTGGCT...AGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp CTTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACAGGGGCTGGGTGGCTCTaGATCCCGGAGGCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: LKQALGSLPQTGRVMLHTGAGWL*IPEAAH
Trigger: ATGAGCTGCCTCCGGGATGCAGAGCCACCCAGCCCC...TGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp TGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCCGAACGGCACTTAGGTTCGACTGGAACACCTaGACCAGACGGCGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: CHRQGESCCTHGPRTALRFDWNT*TRRRQQ
Trigger: CTGCTGGCGCCGTCTGGTGCAGGTGTTCCAGTCGAA...CCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp CTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGCCCCCGACCTGCACTaGCGCCAGGATGCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: LEFNLLTLLPALKASQGTAPDLH*RQDAQH
Trigger: GTGCTGGGCATCCTGGCGGCAGTGCAGGTCGGGGGC...AGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGGCCCGCAGAGGGGCTaGGCGGGTCTGCTGCGAGAG +
Preference number: 4 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLGPQRG*AGLLRE
Trigger: CTCTCGCAGCAGACCCGCGCAGCCCCTCTGCGGGCC...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGTGCCGATTCTCATGCTaGAGGTGGAGCCGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWCRFSC*RWSRAW
Trigger: CCAGGCCCGGCTCCACCTGCAGCATGAGAATCGGCA...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGTGCTGCCGATTCTCATaGTGCAGGTGGAGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWCCRFS*CRWSRA
Trigger: GGCCCGGCTCCACCTGCAGCATGAGAATCGGCAGCA...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp TGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCCGAACGGCACTTAGGAGCAGCCGCTCCTGCTaGCGATTCTCATGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: CHRQGESCCTHGPRTALRSSRSC*RFSCCR
Trigger: CCTGCAGCATGAGAATCGGCAGCAGGAGCGGCTGCT...CCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGGGGAGCTATTGGCCCGAGTCCGCTaGAGCTTGGCCAGCATGGCC +
Preference number: 4 (lower is better)
Translates to: NLLTLLPALKASQGTGELLARVR*SLASMA
Trigger: GGCCATGCTGGCCAAGCTGCAGCGGACTCGGGCCAA...TAGCTCCCCAGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp TGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCCGAACGGCACTTAGGCCACCTGATCGTAGGTaGTGGCGTTCAGCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: CHRQGESCCTHGPRTALRPPDRR*WRSALR
Trigger: CCTCAGGGCTGAACGCCAGCACCTACGATCAGGTGG...CCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp CTTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACAGGTCTGGAGGCTCAGTaGCCCCTGCCACAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: LKQALGSLPQTGRVMLHTGLEAQ*PLPQLH
Trigger: GTGGAGCTGTGGCAGGGGGCACTGAGCCTCCAGACC...TGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp TGCCCCCTGCCACAGCTCCACCCAGTGAGCACAGAGTCCACTCAATGCCCACCTAGTGCCCAGGACCAGTaGTGGGGATGCAGGTATTGC +
Preference number: 4 (lower is better)
Translates to: CPLPQLHPVSTESTQCPPSAQDQ*WGCRYC
Trigger: GCAATACCTGCATCCCCAGCACTGGTCCTGGGCACT...AGGTGGGCATTGAGTGGACTCTGTGCTCACTGGGTGGAGCTGTGGCAGGGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp TGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCCGAACGGCACTTAGGCCCTCCTCTGCTCTGTaGATAGGAGGGACACCTGGC +
Preference number: 4 (lower is better)
Translates to: CHRQGESCCTHGPRTALRPSSAL*IGGTPG
Trigger: GCCAGGTGTCCCTCCTATGCACAGAGCAGAGGAGGG...CCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGGAGGGGCAAGTGCACTaGCTGCCCCTTCCACTCCCA +
Preference number: 4 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWEGQVH*LPLPLP
Trigger: TGGGAGTGGAAGGGGCAGGCAGTGCACTTGCCCCTC...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp GGGAATCTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGGGCCCGCAGGGGTaGGGCTGGGTGGCTCTGCAT +
Preference number: 4 (lower is better)
Translates to: GNLEFNLLTLLPALKASQGGPQG*GWVALH
Trigger: ATGCAGAGCCACCCAGCCCCACCCCTGCGGGCCCCC...TTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAGATTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp CTTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACACAGCCCGCATGCGGATaGGGAGGAGCGTGTAGGCGA +
Preference number: 4 (lower is better)
Translates to: LKQALGSLPQTGRVMLHTQPACG*GGACRR
Trigger: TCGCCTACACGCTCCTCCCCATCCGCATGCGGGCTG...TGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp TGCCCCCTGCCACAGCTCCACCCAGTGAGCACAGAGTCCACTCAATGCCCACCTTCCATGGCAACGTGCTaGGGCAATACCGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: CPLPQLHPVSTESTQCPPSMATC*GNTDSS
Trigger: GCTGCTGTCGGTATTGCCCCAGCACGTTGCCATGGA...AGGTGGGCATTGAGTGGACTCTGTGCTCACTGGGTGGAGCTGTGGCAGGGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGGGGAGCTAGTTGCCCGAGTGATGTaGATGCGGCCAGCCCGGCCT +
Preference number: 4 (lower is better)
Translates to: NLLTLLPALKASQGTGELVARVM*MRPARP
Trigger: AGGCCGGGCTGGCCGCATCCACATCACTCGGGCAAC...TAGCTCCCCAGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp TGCCCCCTGCCACAGCTCCACCCAGTGAGCACAGAGTCCACTCAATGCCCACCTTGCTGCGGGCATCGATaGCACGGCTCAGGAACTCAT +
Preference number: 4 (lower is better)
Translates to: CPLPQLHPVSTESTQCPPCCGHR*HGSGTH
Trigger: ATGAGTTCCTGAGCCGTGCCATCGATGCCCGCAGCA...AGGTGGGCATTGAGTGGACTCTGTGCTCACTGGGTGGAGCTGTGGCAGGGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp CTTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACAAGGTCCGTGGTCACCTaGATTCGGTCGGGGACCCCC +
Preference number: 4 (lower is better)
Translates to: LKQALGSLPQTGRVMLHTRSVVT*IRSGTP
Trigger: GGGGGTCCCCGACCGAATCCAGGTGACCACGGACCT...TGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp TGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCCGAACGGCACTTAGGCAGAGTGACCTGATCTaGACCCCGACGGGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: CHRQGESCCTHGPRTALRQSDLI*TPTGSS
Trigger: TGAGGACCCCGTCGGGGTCCAGATCAGGTCACTCTG...CCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR CAA 72 bp AGTGCTGGCATGGAGCACTGGGGCTTAAGCAAGCGCTaGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGC +
Preference number: 4 (lower is better)
Translates to: SAGMEHWGLSKR*GPCHRQGESCC
Trigger: GCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAGCCCCAGTGCTCCATGCCAGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGGCCGCCCCTCCGGATaGAGGCGTCATCCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLGRPSG*RRHPAR
Trigger: CCTGGCAGGATGACGCCTTCATCCGGAGGGGCGGCC...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp AGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGCATAGAGGCCCAGGCCGCTaGGGACGGCAGCCCGCATGC +
Preference number: 4 (lower is better)
Translates to: RKFLSLCPSNPRQFKCWHRGPGR*GRQPAC
Trigger: GCATGCGGGCTGCCGTCCTCAGCGGCCTGGGCCTCT...ATGCCAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGTGGTCCTTCCGCAGCTaGTCAATGCTGCGGGCATCG +
Preference number: 4 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWWSFRS*SMLRAS
Trigger: CGATGCCCGCAGCATTGATCAGCTGCGGAAGGACCA...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp AACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGGGGAGCTAGGTGCTATGTGCCCGTaGGCGGACAATGCTGCGGGA +
Preference number: 4 (lower is better)
Translates to: NLLTLLPALKASQGTGELGAMCP*ADNAAG
Trigger: TCCCGCAGCATTGTCCGCTCACGGGCACATAGCACC...TAGCTCCCCAGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp TGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCCGAACGGCACTTAGGCAGGGGTCATATATTTaGGGGCCACCCTCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: CHRQGESCCTHGPRTALRQGSYI*GPPSLQ
Trigger: CTGCAGGGAGGGTGGCCCTCAAATATATGACCCCTG...CCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp AACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGGGGAGCTAGCTGGCGTTCAGCCCTaGGGCAGCCATGTAGGTGCT +
Preference number: 4 (lower is better)
Translates to: NLLTLLPALKASQGTGELAGVQP*GSHVGA
Trigger: AGCACCTACATGGCTGCCTCAGGGCTGAACGCCAGC...TAGCTCCCCAGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp CCCGAACGGCACTTAGGGATTTGGCACAAAAAGGACTCCTCTCCCTCCTTTTGCGCTTCCGAGCCCCGATaGCACCTGCCACGACTGGGC +
Preference number: 4 (lower is better)
Translates to: PERHLGIWHKKDSSPSFCASEPR*HLPRLG
Trigger: GCCCAGTCGTGGCAGGTGTCATCGGGGCTCGGAAGC...GCAAAAGGAGGGAGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGTTCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp TGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCCGAACGGCACTTAGGTGCTGGGGCCCCCATTaGGGAAGTAGGTGGTCATCT +
Preference number: 4 (lower is better)
Translates to: CHRQGESCCTHGPRTALRCWGPH*GSRWSS
Trigger: AGATGACCACCTACTTCCTCAATGGGGGCCCCAGCA...CCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp TGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCCGAACGGCACTTAGGCTTGGTCCCTTCAGCTaGATTTGTGGCTGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: CHRQGESCCTHGPRTALRLGPFS*ICGWAL
Trigger: CAGGGCCCAGCCACAAATTCAGCTGAAGGGACCAAG...CCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp CTTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACAAGCACTGGGGCAGAGTaGCCTGATCTGGACCCCGAC +
Preference number: 4 (lower is better)
Translates to: LKQALGSLPQTGRVMLHTSTGAE*PDLDPD
Trigger: GTCGGGGTCCAGATCAGGTCACTCTGCCCCAGTGCT...TGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AAGTTTAAGGTTCCTCTTCCCCACCCCGTAGTACCAGTATCCAGGTCCTCAGAGCGTGCAGAAGCCACCTaGCCGAGTGCCACGGCGCCG +
Preference number: 4 (lower is better)
Translates to: KFKVPLPHPVVPVSRSSERAEAT*PSATAP
Trigger: CGGCGCCGTGGCACTCGGGCAGGTGGCTTCTGCACG...CTCTGAGGACCTGGATACTGGTACTACGGGGTGGGGAAGAGGAACCTTAAACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp GGGAATCTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAACGTGCAGAAGCCACCTaGCCGAGTGCCACGGCGCCG +
Preference number: 4 (lower is better)
Translates to: GNLEFNLLTLLPALKASQRAEAT*PSATAP
Trigger: CGGCGCCGTGGCACTCGGGCAGGTGGCTTCTGCACG...TTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAGATTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AAGTTTAAGGTTCCTCTTCCCCACCCCGTAGTACCAGTATCCAGGTCCTCAGAGCCAGCTCCTTGCCCTTaGCTGGGCCGCCCCTCCGGA +
Preference number: 4 (lower is better)
Translates to: KFKVPLPHPVVPVSRSSEPAPCP*LGRPSG
Trigger: TCCGGAGGGGCGGCCCAGGCAAGGGCAAGGAGCTGG...CTCTGAGGACCTGGATACTGGTACTACGGGGTGGGGAAGAGGAACCTTAAACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AAGTTTAAGGTTCCTCTTCCCCACCCCGTAGTACCAGTATCCAGGTCCTCAGAGCTGAGGGCGGGCGGGTaGGGCGTGGAAAGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: KFKVPLPHPVVPVSRSSELRAGG*GVESQQ
Trigger: CTGCTGGCTTTCCACGCCGCACCCGCCCGCCCTCAG...CTCTGAGGACCTGGATACTGGTACTACGGGGTGGGGAAGAGGAACCTTAAACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp GGGAATCTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAACTGAGGGCGGGCGGGTaGGGCGTGGAAAGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: GNLEFNLLTLLPALKASQLRAGG*GVESQQ
Trigger: CTGCTGGCTTTCCACGCCGCACCCGCCCGCCCTCAG...TTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAGATTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp GGGGAAGTGCCCAGGACCAGTGCTGGGGATGCAGGTATTGCAAAGGCAAGCATGGGCACAGGCCAACAGTaGCACATAGGCAGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: GEVPRTSAGDAGIAKASMGTGQQ*HIGRLR
Trigger: CCTCAGCCTGCCTATGTGGCACTGTTGGCCTGTGCC...CATGCTTGCCTTTGCAATACCTGCATCCCCAGCACTGGTCCTGGGCACTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGGGGAGCTAGCACTGCCGCCAGGATaGCCAGCACCACGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: NLLTLLPALKASQGTGELALPPG*PAPRSS
Trigger: TGAGCTACGTGGTGCTGGGCATCCTGGCGGCAGTGC...TAGCTCCCCAGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGCCCCCGACCTGCACTaGCGCCAGGATGCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLAPDLH*RQDAQH
Trigger: GTGCTGGGCATCCTGGCGGCAGTGCAGGTCGGGGGC...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp CCCGAACGGCACTTAGGGATTTGGCACAAAAAGGACTCCTCTCCCTCCTTTTGCGGACGGCAGCCCGCATaGGGATGGGGAGGAGCGTGT +
Preference number: 4 (lower is better)
Translates to: PERHLGIWHKKDSSPSFCGRQPA*GWGGAC
Trigger: ACACGCTCCTCCCCATCCGCATGCGGGCTGCCGTCC...GCAAAAGGAGGGAGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGTTCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp TGCCCCCTGCCACAGCTCCACCCAGTGAGCACAGAGTCCACTCAATGCCCACCTCAGGCCAAGATCAAATaGAAGGTGGAGAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: CPLPQLHPVSTESTQCPPQAKIK*KVERPR
Trigger: CCTGGGCCTCTCCACCTTGCATTTGATCTTGGCCTG...AGGTGGGCATTGAGTGGACTCTGTGCTCACTGGGTGGAGCTGTGGCAGGGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp CTTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGCTGCCGATTCTCATaGTGCAGGTGGAGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: LKQALGSLPQTGRVMLHTCCRFS*CRWSRA
Trigger: GGCCCGGCTCCACCTGCAGCATGAGAATCGGCAGCA...TGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp TGTCCCAGGACACTATCTGGGGAAGCCAGGAAATTCCTCAGCCTCTGTCCATCAGCCAGCCCGGCCTCCTaGCTCCATGTGGTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: CPRTLSGEARKFLSLCPSASPAS*LHVVGQ
Trigger: CTGGCCAACCACATGGAGGCAGGAGGCCGGGCTGGC...TGATGGACAGAGGCTGAGGAATTTCCTGGCTTCCCCAGATAGTGTCCTGGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp CCCGAACGGCACTTAGGGATTTGGCACAAAAAGGACTCCTCTCCCTCCTTTTGCGCCAGCCCGGCCTCCTaGCTCCATGTGGTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: PERHLGIWHKKDSSPSFCASPAS*LHVVGQ
Trigger: CTGGCCAACCACATGGAGGCAGGAGGCCGGGCTGGC...GCAAAAGGAGGGAGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGTTCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGGCAGCTGATCAATGCTaGGGGCATCGATGGCACGGC +
Preference number: 4 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWAADQC*GHRWHG
Trigger: GCCGTGCCATCGATGCCCGCAGCATTGATCAGCTGC...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCGTGAGCGGACAATaGTGCGGGACAGACGTTGCA +
Preference number: 4 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWPVSGQ*CGTDVA
Trigger: TGCAACGTCTGTCCCGCAGCATTGTCCGCTCACGGG...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp TGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCCGAACGGCACTTAGGCCGATGCTGCTGATGTaGAGGAAGACAGAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: CHRQGESCCTHGPRTALRPMLLM*RKTELA
Trigger: GGCCAGCTCTGTCTTCCTGCACATCAGCAGCATCGG...CCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp CCCGAACGGCACTTAGGGATTTGGCACAAAAAGGACTCCTCTCCCTCCTTTTGCGAGGGCCACCCTCCCTaGAGCTGGACAGTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: PERHLGIWHKKDSSPSFCEGHPP*SWTVQP
Trigger: GGGCTGGACTGTCCAGCTGCAGGGAGGGTGGCCCTC...GCAAAAGGAGGGAGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGTTCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp TGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCCGAACGGCACTTAGGAGTAGAGTTCATCATTaGGGCGCTCCCGGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: CHRQGESCCTHGPRTALRSRVHH*GAPGPG
Trigger: TCCTGGCCCGGGAGCGCCGCAATGATGAACTCTACT...CCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGGGCAAGTGCACTGCCTaGCCCTTCCACTCCCAAACC +
Preference number: 4 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWGKCTA*PFHSQT
Trigger: GGTTTGGGAGTGGAAGGGGCAGGCAGTGCACTTGCC...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp GGGGAAGTGCCCAGGACCAGTGCTGGGGATGCAGGTATTGCAAAGGCAAGCATGATGAGGAGGGGCAAGTaGACTGCCTGCCCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: GEVPRTSAGDAGIAKASMMRRGK*TACPFH
Trigger: GTGGAAGGGGCAGGCAGTGCACTTGCCCCTCCTCAT...CATGCTTGCCTTTGCAATACCTGCATCCCCAGCACTGGTCCTGGGCACTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp GGGAATCTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAACCGCAGGGGTGGGGCTaGGTGGCTCTGCATCCCGGA +
Preference number: 4 (lower is better)
Translates to: GNLEFNLLTLLPALKASQPQGWG*VALHPG
Trigger: TCCGGGATGCAGAGCCACCCAGCCCCACCCCTGCGG...TTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAGATTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGCGGGCGGGTGCGGCGTaGAAAGCCAGCAGCACCGCT +
Preference number: 4 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLRAGAA*KASSTA
Trigger: AGCGGTGCTGCTGGCTTTCCACGCCGCACCCGCCCG...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp TGCCCCCTGCCACAGCTCCACCCAGTGAGCACAGAGTCCACTCAATGCCCACCTACCCACATGGAGTCCTaGCGGAAGCTATGCCGGTTA +
Preference number: 4 (lower is better)
Translates to: CPLPQLHPVSTESTQCPPTHMES*RKLCRL
Trigger: TAACCGGCATAGCTTCCGCCAGGACTCCATGTGGGT...AGGTGGGCATTGAGTGGACTCTGTGCTCACTGGGTGGAGCTGTGGCAGGGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGGGGAGCTAGCCCTTCCATGGAGTTaGCCCGAGTCCGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: NLLTLLPALKASQGTGELALPWS*PESAAA
Trigger: AGCTGCAGCGGACTCGGGCCAACTCCATGGAAGGGC...TAGCTCCCCAGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGGCATCAGCCCTTCCATaGAGTTGGCCCGAGTCCGCT +
Preference number: 4 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWASALP*SWPESA
Trigger: AGCGGACTCGGGCCAACTCCATGGAAGGGCTGATGC...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp CTTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACAAGCTGCAGGTGGGCATaGTGCCCTCACACAGGGGAG +
Preference number: 4 (lower is better)
Translates to: LKQALGSLPQTGRVMLHTSCRWA*CPHTGE
Trigger: CTCCCCTGTGTGAGGGCACCATGCCCACCTGCAGCT...TGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307885.4
ENST00000357869.8
CDS-3UTR CCA 90 bp GGGGAAGTGCCCAGGACCAGTGCTGGGGATGCAGGTATTGCAAAGGCAAGCATGCCTGATCGTAGGTGCTaGCGTTCAGCCCTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: GEVPRTSAGDAGIAKASMPDRRC*RSALRQ
Trigger: CTGCCTCAGGGCTGAACGCCAGCACCTACGATCAGG...CATGCTTGCCTTTGCAATACCTGCATCCCCAGCACTGGTCCTGGGCACTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp TGCCCCCTGCCACAGCTCCACCCAGTGAGCACAGAGTCCACTCAATGCCCACCTGCCCAGGACCAGTGCTaGGGATGCAGGTATTGCAAA +
Preference number: 4 (lower is better)
Translates to: CPLPQLHPVSTESTQCPPAQDQC*GCRYCK
Trigger: TTTGCAATACCTGCATCCCCAGCACTGGTCCTGGGC...AGGTGGGCATTGAGTGGACTCTGTGCTCACTGGGTGGAGCTGTGGCAGGGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp TGTCCCAGGACACTATCTGGGGAAGCCAGGAAATTCCTCAGCCTCTGTCCATCAGGAGGGACACCTGGCTaGGGTGGGGAAGTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: CPRTLSGEARKFLSLCPSGGTPG*GGEVPR
Trigger: CCTGGGCACTTCCCCACCCCAGCCAGGTGTCCCTCC...TGATGGACAGAGGCTGAGGAATTTCCTGGCTTCCCCAGATAGTGTCCTGGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGGGGAGCTAAGACACCCCGTTCCCTaGAGCGTGCAGGAACTGGGG +
Preference number: 4 (lower is better)
Translates to: NLLTLLPALKASQGTGELRHPVP*SVQELG
Trigger: CCCCAGTTCCTGCACGCTCCAGGGAACGGGGTGTCT...TAGCTCCCCAGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp TGCCCCCTGCCACAGCTCCACCCAGTGAGCACAGAGTCCACTCAATGCCCACCTCCAACACCAGAGACTTaGGAGGGCAGGTTTGGGATC +
Preference number: 4 (lower is better)
Translates to: CPLPQLHPVSTESTQCPPPTPET*EGRFGI
Trigger: GATCCCAAACCTGCCCTCCCAAGTCTCTGGTGTTGG...AGGTGGGCATTGAGTGGACTCTGTGCTCACTGGGTGGAGCTGTGGCAGGGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp CCCGAACGGCACTTAGGGATTTGGCACAAAAAGGACTCCTCTCCCTCCTTTTGCCGGGGATCCAGGGTGTaGACAGGCCCTCCCACCTGG +
Preference number: 4 (lower is better)
Translates to: PERHLGIWHKKDSSPSFCRGSRV*TGPPTW
Trigger: CCAGGTGGGAGGGCCTGTCCACACCCTGGATCCCCG...GCAAAAGGAGGGAGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGTTCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTAGGCCGCCCCTCCGGATaGAGGCGTCATCCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLGRPSG*RRHPAR
Trigger: CCTGGCAGGATGACGCCTTCATCCGGAGGGGCGGCC...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp AACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGGGGAGCTAGCTCATTCAGGGTCATaGCCAGCTCCTGCGCAGTGC +
Preference number: 4 (lower is better)
Translates to: NLLTLLPALKASQGTGELAHSGS*PAPAQC
Trigger: GCACTGCGCAGGAGCTGGTCATGACCCTGAATGAGC...TAGCTCCCCAGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp TGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCCGAACGGCACTTAGGTTGATCCTCAGGCAGTaGTTCTCCGCAGCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: CHRQGESCCTHGPRTALRLILRQ*FSAASL
Trigger: CAAGCTGGCTGCGGAGAATCACTGCCTGAGGATCAA...CCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp GGGGAAGTGCCCAGGACCAGTGCTGGGGATGCAGGTATTGCAAAGGCAAGCATGCAGGGGTCATATATTTaGGGGCCACCCTCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: GEVPRTSAGDAGIAKASMQGSYI*GPPSLQ
Trigger: CTGCAGGGAGGGTGGCCCTCAAATATATGACCCCTG...CATGCTTGCCTTTGCAATACCTGCATCCCCAGCACTGGTCCTGGGCACTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGCTTCCGAGCCCCGATaGCACCTGCCACGACTGGGC +
Preference number: 4 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLASEPR*HLPRLG
Trigger: GCCCAGTCGTGGCAGGTGTCATCGGGGCTCGGAAGC...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp CTTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATCATATAGCGGGGCGTaGAGAAGCCACCTGCCCGAG +
Preference number: 4 (lower is better)
Translates to: LKQALGSLPQTGRVMLHTSYSGA*RSHLPE
Trigger: CTCGGGCAGGTGGCTTCTGCACGCCCCGCTATATGA...TGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTCTGAGGGCGGGCGGGTaGGGCGTGGAAAGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPLRAGG*GVESQQ
Trigger: CTGCTGGCTTTCCACGCCGCACCCGCCCGCCCTCAG...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp TGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCCGAACGGCACTTAGGTCCTGGCGGAAGCTATaGCGGTTACACACCACCATG +
Preference number: 4 (lower is better)
Translates to: CHRQGESCCTHGPRTALRSWRKL*RLHTTM
Trigger: CATGGTGGTGTGTAACCGGCATAGCTTCCGCCAGGA...CCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTGCCCCCGACCTGCACTaGCGCCAGGATGCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPAPDLH*RQDAQH
Trigger: GTGCTGGGCATCCTGGCGGCAGTGCAGGTCGGGGGC...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGGGGAGCTAAGCAGCAGCCGCTCCTaGTGCCGATTCTCATGCTGC +
Preference number: 4 (lower is better)
Translates to: NLLTLLPALKASQGTGELSSSRS*CRFSCC
Trigger: GCAGCATGAGAATCGGCAGCAGGAGCGGCTGCTGCT...TAGCTCCCCAGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGTCCGCAGCTGATCAATaGTGCGGGCATCGATGGCAC +
Preference number: 4 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWSAADQ*CGHRWH
Trigger: GTGCCATCGATGCCCGCAGCATTGATCAGCTGCGGA...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp CTTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACACCCGTGAGCGGACAATaGTGCGGGACAGACGTTGCA +
Preference number: 4 (lower is better)
Translates to: LKQALGSLPQTGRVMLHTPVSGQ*CGTDVA
Trigger: TGCAACGTCTGTCCCGCAGCATTGTCCGCTCACGGG...TGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGGGGAGCTACCCGTGAGCGGACAATaGTGCGGGACAGACGTTGCA +
Preference number: 4 (lower is better)
Translates to: NLLTLLPALKASQGTGELPVSGQ*CGTDVA
Trigger: TGCAACGTCTGTCCCGCAGCATTGTCCGCTCACGGG...TAGCTCCCCAGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp GGGGAAGTGCCCAGGACCAGTGCTGGGGATGCAGGTATTGCAAAGGCAAGCATGCCGATGCTGCTGATGTaGAGGAAGACAGAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: GEVPRTSAGDAGIAKASMPMLLM*RKTELA
Trigger: GGCCAGCTCTGTCTTCCTGCACATCAGCAGCATCGG...CATGCTTGCCTTTGCAATACCTGCATCCCCAGCACTGGTCCTGGGCACTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AAGTTTAAGGTTCCTCTTCCCCACCCCGTAGTACCAGTATCCAGGTCCTCAGAGGAGGGCCACCCTCCCTaGAGCTGGACAGTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: KFKVPLPHPVVPVSRSSEEGHPP*SWTVQP
Trigger: GGGCTGGACTGTCCAGCTGCAGGGAGGGTGGCCCTC...CTCTGAGGACCTGGATACTGGTACTACGGGGTGGGGAAGAGGAACCTTAAACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGCTGGGGTGGGGAAGTaGCCAGGACCAGTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLAGVGK*PGPVLG
Trigger: CCCCAGCACTGGTCCTGGGCACTTCCCCACCCCAGC...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp TGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCCGAACGGCACTTAGGCCCATCCCACTCCTGTaGAACCTGGGCATCTCTCTA +
Preference number: 4 (lower is better)
Translates to: CHRQGESCCTHGPRTALRPIPLL*NLGISL
Trigger: TAGAGAGATGCCCAGGTTGCACAGGAGTGGGATGGG...CCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp CTTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACACAGGGAGAGTCATGCTaGACACATGGCCCCCGAACG +
Preference number: 4 (lower is better)
Translates to: LKQALGSLPQTGRVMLHTQGESC*THGPRT
Trigger: CGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTG...TGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGGGGAGCTACAGGGAGAGTCATGCTaGACACATGGCCCCCGAACG +
Preference number: 4 (lower is better)
Translates to: NLLTLLPALKASQGTGELQGESC*THGPRT
Trigger: CGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTG...TAGCTCCCCAGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp GGGGAAGTGCCCAGGACCAGTGCTGGGGATGCAGGTATTGCAAAGGCAAGCATGAAGCGCTTGGGTCCCTaGCACAGACAGGGAGAGTCA +
Preference number: 4 (lower is better)
Translates to: GEVPRTSAGDAGIAKASMKRLGP*HRQGES
Trigger: TGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTT...CATGCTTGCCTTTGCAATACCTGCATCCCCAGCACTGGTCCTGGGCACTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCAGACAGTTCAAGTaGTGGCATGGAGCACTGGGG +
Preference number: 4 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWPRQFK*WHGALG
Trigger: CCCCAGTGCTCCATGCCAGCACTTGAACTGTCTGGG...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTACCGCAGGGGTGGGGCTaGGTGGCTCTGCATCCCGGA +
Preference number: 4 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLPQGWG*VALHPG
Trigger: TCCGGGATGCAGAGCCACCCAGCCCCACCCCTGCGG...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp TGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCCGAACGGCACTTAGGTGGAAGAAGTACCGCTaGTACAGGCGCTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: CHRQGESCCTHGPRTALRWKKYR*YRRSSL
Trigger: CAAGCTGGAGCGCCTGTACCAGCGGTACTTCTTCCA...CCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTCGGGCGGGTGCGGCGTaGAAAGCCAGCAGCACCGCT +
Preference number: 4 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPRAGAA*KASSTA
Trigger: AGCGGTGCTGCTGGCTTTCCACGCCGCACCCGCCCG...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp TGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCCGAACGGCACTTAGGGGAACAGCAGCACATTaGCACCGAGCTGCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: CHRQGESCCTHGPRTALRGTAAH*HRAASR
Trigger: TCTGGAAGCAGCTCGGTGCCAATGTGCTGCTGTTCC...CCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp CTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGTTGCCCGAGTGATGTaGATGCGGCCAGCCCGGCCT +
Preference number: 4 (lower is better)
Translates to: LEFNLLTLLPALKASQGTVARVM*MRPARP
Trigger: AGGCCGGGCTGGCCGCATCCACATCACTCGGGCAAC...AGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp CCCGAACGGCACTTAGGGATTTGGCACAAAAAGGACTCCTCTCCCTCCTTTTGCGTTGCCCGAGTGATGTaGATGCGGCCAGCCCGGCCT +
Preference number: 4 (lower is better)
Translates to: PERHLGIWHKKDSSPSFCVARVM*MRPARP
Trigger: AGGCCGGGCTGGCCGCATCCACATCACTCGGGCAAC...GCAAAAGGAGGGAGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGTTCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp GGGGAAGTGCCCAGGACCAGTGCTGGGGATGCAGGTATTGCAAAGGCAAGCATGTCCTCTTTCCGTTTCTaGCTGGCGCCCAGGATGAGG +
Preference number: 4 (lower is better)
Translates to: GEVPRTSAGDAGIAKASMSSFRF*LAPRMR
Trigger: CCTCATCCTGGGCGCCAGCCAGAAACGGAAAGAGGA...CATGCTTGCCTTTGCAATACCTGCATCCCCAGCACTGGTCCTGGGCACTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp GGGGAAGTGCCCAGGACCAGTGCTGGGGATGCAGGTATTGCAAAGGCAAGCATGAGGCCTTGGAGTCCTTaGTCCGGGAGAAGGCACGAT +
Preference number: 4 (lower is better)
Translates to: GEVPRTSAGDAGIAKASMRPWSP*SGRRHD
Trigger: ATCGTGCCTTCTCCCGGACCAAGGACTCCAAGGCCT...CATGCTTGCCTTTGCAATACCTGCATCCCCAGCACTGGTCCTGGGCACTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp TGCCCCCTGCCACAGCTCCACCCAGTGAGCACAGAGTCCACTCAATGCCCACCTAGTTGTCAAAGATGGTaGCTGGGGGACCCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: CPLPQLHPVSTESTQCPPSCQRW*LGDPAE
Trigger: TTCTGCTGGGTCCCCCAGCCACCATCTTTGACAACT...AGGTGGGCATTGAGTGGACTCTGTGCTCACTGGGTGGAGCTGTGGCAGGGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp CTTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACACCTGATCGTAGGTGCTaGCGTTCAGCCCTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LKQALGSLPQTGRVMLHTPDRRC*RSALRQ
Trigger: CTGCCTCAGGGCTGAACGCCAGCACCTACGATCAGG...TGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp TGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCCGAACGGCACTTAGGCCAGATGTCATACTGTaGCTTCCGAGCCCCGATGAC +
Preference number: 4 (lower is better)
Translates to: CHRQGESCCTHGPRTALRPDVIL*LPSPDD
Trigger: GTCATCGGGGCTCGGAAGCCACAGTATGACATCTGG...CCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp CTTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACACCTGGTACAGGTCCGTaGTCACCTGGATTCGGTCGG +
Preference number: 4 (lower is better)
Translates to: LKQALGSLPQTGRVMLHTPGTGP*SPGFGR
Trigger: CCGACCGAATCCAGGTGACCACGGACCTGTACCAGG...TGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp TGCCCCCTGCCACAGCTCCACCCAGTGAGCACAGAGTCCACTCAATGCCCACCTCCAAGCACAGCCTGCTaGGATGTTCCCTTTTGTGGT +
Preference number: 4 (lower is better)
Translates to: CPLPQLHPVSTESTQCPPPSTAC*DVPFCG
Trigger: ACCACAAAAGGGAACATCCCAGCAGGCTGTGCTTGG...AGGTGGGCATTGAGTGGACTCTGTGCTCACTGGGTGGAGCTGTGGCAGGGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp TGCCCCCTGCCACAGCTCCACCCAGTGAGCACAGAGTCCACTCAATGCCCACCTCCTGCTCCCAAAGGCTaGAAGATTGGAGAGGGAACA +
Preference number: 4 (lower is better)
Translates to: CPLPQLHPVSTESTQCPPPAPKG*KIGEGT
Trigger: TGTTCCCTCTCCAATCTTCCAGCCTTTGGGAGCAGG...AGGTGGGCATTGAGTGGACTCTGTGCTCACTGGGTGGAGCTGTGGCAGGGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp TGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCCGAACGGCACTTAGGCACTCCTGTGCAACCTaGGCATCTCTCTACATCCCC +
Preference number: 4 (lower is better)
Translates to: CHRQGESCCTHGPRTALRHSCAT*ASLYIP
Trigger: GGGGATGTAGAGAGATGCCCAGGTTGCACAGGAGTG...CCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGACAGGCCCTCCCACCTaGCAAGAAGCAGAGACAAGC +
Preference number: 4 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWTGPPT*QEAETS
Trigger: GCTTGTCTCTGCTTCTTGCCAGGTGGGAGGGCCTGT...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp TGCCCCCTGCCACAGCTCCACCCAGTGAGCACAGAGTCCACTCAATGCCCACCTGCCTGGCCAAGATGGTaGAACCTCGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: CPLPQLHPVSTESTQCPPAWPRW*NLVSTK
Trigger: TTTAGTAGAGACGAGGTTTCACCATCTTGGCCAGGC...AGGTGGGCATTGAGTGGACTCTGTGCTCACTGGGTGGAGCTGTGGCAGGGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307885.4
CDS-3UTR TCA 90 bp TGCCCCCTGCCACAGCTCCACCCAGTGAGCACAGAGTCCACTCAATGCCCACCTTCCCCAATCAACAGGTaGGAACCCAAGACACAGTCA +
Preference number: 4 (lower is better)
Translates to: CPLPQLHPVSTESTQCPPSPINR*EPKTQS
Trigger: TGACTGTGTCTTGGGTTCTCACCTGTTGATTGGGGA...AGGTGGGCATTGAGTGGACTCTGTGCTCACTGGGTGGAGCTGTGGCAGGGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307885.4
CDS-3UTR TCA 90 bp AGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGCATCCAGCAGCACCGCTGTaGGCAGCACCAGCACCGCCA +
Preference number: 4 (lower is better)
Translates to: RKFLSLCPSNPRQFKCWHPAAPL*AAPAPP
Trigger: TGGCGGTGCTGGTGCTGCTCACAGCGGTGCTGCTGG...ATGCCAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp TGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCCGAACGGCACTTAGGGTGTGCAGATGCCAATaGCGTTGGTGCAGAGGAACA +
Preference number: 4 (lower is better)
Translates to: CHRQGESCCTHGPRTALRVCRCQ*RWCRGT
Trigger: TGTTCCTCTGCACCAACGTCATTGGCATCTGCACAC...CCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp AACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGGGGAGCTAGGCTGGCGCCCAGGATaGGGAAAGTCTCAATGTGCT +
Preference number: 4 (lower is better)
Translates to: NLLTLLPALKASQGTGELGWRPG*GKSQCA
Trigger: AGCACATTGAGACTTTCCTCATCCTGGGCGCCAGCC...TAGCTCCCCAGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp CTTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGCTGGGGCCCCCATTaGGGAAGTAGGTGGTCATCT +
Preference number: 4 (lower is better)
Translates to: LKQALGSLPQTGRVMLHTCWGPH*GSRWSS
Trigger: AGATGACCACCTACTTCCTCAATGGGGGCCCCAGCA...TGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp CCCGAACGGCACTTAGGGATTTGGCACAAAAAGGACTCCTCTCCCTCCTTTTGCCGCCGCGAACGCTTCTaGCCATTGCGTTCACCCCAG +
Preference number: 4 (lower is better)
Translates to: PERHLGIWHKKDSSPSFCRRERF*PLRSPQ
Trigger: CTGGGGTGAACGCAATGGGCAGAAGCGTTCGCGGCG...GCAAAAGGAGGGAGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGTTCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp CTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTCGCCGCGAACGCTTCTaGCCATTGCGTTCACCCCAG +
Preference number: 4 (lower is better)
Translates to: LEFNLLTLLPALKASQGTRRERF*PLRSPQ
Trigger: CTGGGGTGAACGCAATGGGCAGAAGCGTTCGCGGCG...AGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGTTGGCCGAACGGAACTaGTTCGACTGGAACACCTGC +
Preference number: 4 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWLAERN*FDWNTC
Trigger: GCAGGTGTTCCAGTCGAAGCAGTTCCGTTCGGCCAA...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp GGGGAAGTGCCCAGGACCAGTGCTGGGGATGCAGGTATTGCAAAGGCAAGCATGCAGGCCAAGATCAAATaGAAGGTGGAGAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GEVPRTSAGDAGIAKASMQAKIK*KVERPR
Trigger: CCTGGGCCTCTCCACCTTGCATTTGATCTTGGCCTG...CATGCTTGCCTTTGCAATACCTGCATCCCCAGCACTGGTCCTGGGCACTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTAGCCAGCCCGGCCTCCTaGCTCCATGTGGTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLASPAS*LHVVGQ
Trigger: CTGGCCAACCACATGGAGGCAGGAGGCCGGGCTGGC...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGCAGGTACTGCAGTGTTaGCCGAGTGATGTGGATGCG +
Preference number: 4 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWQVLQC*PSDVDA
Trigger: CGCATCCACATCACTCGGGCAACACTGCAGTACCTG...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp GGGGAAGTGCCCAGGACCAGTGCTGGGGATGCAGGTATTGCAAAGGCAAGCATGTCCCCGTTCAGGTACTaGAGTGTTGCCCGAGTGATG +
Preference number: 4 (lower is better)
Translates to: GEVPRTSAGDAGIAKASMSPFRY*SVARVM
Trigger: CATCACTCGGGCAACACTGCAGTACCTGAACGGGGA...CATGCTTGCCTTTGCAATACCTGCATCCCCAGCACTGGTCCTGGGCACTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGTCCCCGTTCAGGTACTaGAGTGTTGCCCGAGTGATG +
Preference number: 4 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWSPFRY*SVARVM
Trigger: CATCACTCGGGCAACACTGCAGTACCTGAACGGGGA...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGAGTACTCAGGAAAGCTaGAGGTGGGCATGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWSTQES*RWAWCP
Trigger: AGGGCACCATGCCCACCTGCAGCTTTCCTGAGTACT...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307885.4
ENST00000357869.8
CDS-3UTR GCA 90 bp AACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGGGGAGCTACCGATGCTGCTGATGTaGAGGAAGACAGAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: NLLTLLPALKASQGTGELPMLLM*RKTELA
Trigger: GGCCAGCTCTGTCTTCCTGCACATCAGCAGCATCGG...TAGCTCCCCAGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTGAGGGCCACCCTCCCTaGAGCTGGACAGTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPEGHPP*SWTVQP
Trigger: GGGCTGGACTGTCCAGCTGCAGGGAGGGTGGCCCTC...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp GGGGAAGTGCCCAGGACCAGTGCTGGGGATGCAGGTATTGCAAAGGCAAGCATGTTGATCTTTTCCAGCTaGCGGAACCGCTCCTCGCTG +
Preference number: 4 (lower is better)
Translates to: GEVPRTSAGDAGIAKASMLIFSS*RNRSSL
Trigger: CAGCGAGGAGCGGTTCCGGCAGCTGGAAAAGATCAA...CATGCTTGCCTTTGCAATACCTGCATCCCCAGCACTGGTCCTGGGCACTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp TGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCCGAACGGCACTTAGGACAGAGTCCACTCAATaGCCACCTTGGTCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: CHRQGESCCTHGPRTALRTESTQ*PPWSLQ
Trigger: CTGAAGGGACCAAGGTGGGCATTGAGTGGACTCTGT...CCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGCAGCCCTGGCCGGCCTaGTCTTTGGCACCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLQPWPA*SLAPAG
Trigger: ACCTGCAGGTGCCAAAGAGCAGGCCGGCCAGGGCTG...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCATCCCACTCCTGTaGAACCTGGGCATCTCTCTA +
Preference number: 4 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWPIPLL*NLGISL
Trigger: TAGAGAGATGCCCAGGTTGCACAGGAGTGGGATGGG...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp GGGGAAGTGCCCAGGACCAGTGCTGGGGATGCAGGTATTGCAAAGGCAAGCATGCTCAGAGGGATTCCATaGTACCCCAGCCCCAAAGCA +
Preference number: 4 (lower is better)
Translates to: GEVPRTSAGDAGIAKASMLRGIP*YPSPKA
Trigger: TGCTTTGGGGCTGGGGTAGCATGGAATCCCTCTGAG...CATGCTTGCCTTTGCAATACCTGCATCCCCAGCACTGGTCCTGGGCACTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AAGTTTAAGGTTCCTCTTCCCCACCCCGTAGTACCAGTATCCAGGTCCTCAGAGCTCCTTGCCCTTGCCTaGGCCGCCCCTCCGGATGAA +
Preference number: 4 (lower is better)
Translates to: KFKVPLPHPVVPVSRSSELLALA*AAPPDE
Trigger: TTCATCCGGAGGGGCGGCCCAGGCAAGGGCAAGGAG...CTCTGAGGACCTGGATACTGGTACTACGGGGTGGGGAAGAGGAACCTTAAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp CTTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACACGGAACTGCTTCGACTaGAACACCTGCACCAGACGG +
Preference number: 4 (lower is better)
Translates to: LKQALGSLPQTGRVMLHTRNCFD*NTCTRR
Trigger: CCGTCTGGTGCAGGTGTTCCAGTCGAAGCAGTTCCG...TGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp GGGGAAGTGCCCAGGACCAGTGCTGGGGATGCAGGTATTGCAAAGGCAAGCATGTGGAAGAAGTACCGCTaGTACAGGCGCTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: GEVPRTSAGDAGIAKASMWKKYR*YRRSSL
Trigger: CAAGCTGGAGCGCCTGTACCAGCGGTACTTCTTCCA...CATGCTTGCCTTTGCAATACCTGCATCCCCAGCACTGGTCCTGGGCACTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGGGAACAGCAGCACATTaGCACCGAGCTGCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWGTAAH*HRAASR
Trigger: TCTGGAAGCAGCTCGGTGCCAATGTGCTGCTGTTCC...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp CTTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATCCATGGCAACGTGCTaGGGCAATACCGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: LKQALGSLPQTGRVMLHTSMATC*GNTDSS
Trigger: GCTGCTGTCGGTATTGCCCCAGCACGTTGCCATGGA...TGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp TGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCCGAACGGCACTTAGGCACGTACCAGCGAGATaGCCTCAATCATGTCTACCC +
Preference number: 4 (lower is better)
Translates to: CHRQGESCCTHGPRTALRHVPAR*PQSCLP
Trigger: GGGTAGACATGATTGAGGCCATCTCGCTGGTACGTG...CCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp GGGAATCTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAATGCACGCGCCCGCTGTaGATGCCCACGCGCATGTTC +
Preference number: 4 (lower is better)
Translates to: GNLEFNLLTLLPALKASQCTRPL*MPTRMF
Trigger: GAACATGCGCGTGGGCATCCACAGCGGGCGCGTGCA...TTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAGATTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGAGGTCCGTGGTCACCTaGATTCGGTCGGGGACCCCC +
Preference number: 4 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLRSVVT*IRSGTP
Trigger: GGGGGTCCCCGACCGAATCCAGGTGACCACGGACCT...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCAGCTGGTAGCCCTTaGCAGCTAGAACCTGGTACA +
Preference number: 4 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWPAGSP*QLEPGT
Trigger: TGTACCAGGTTCTAGCTGCCAAGGGCTACCAGCTGG...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp TGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCCGAACGGCACTTAGGCCTGCTCCCAAAGGCTaGAAGATTGGAGAGGGAACA +
Preference number: 4 (lower is better)
Translates to: CHRQGESCCTHGPRTALRPAPKG*KIGEGT
Trigger: TGTTCCCTCTCCAATCTTCCAGCCTTTGGGAGCAGG...CCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp TGTCCCAGGACACTATCTGGGGAAGCCAGGAAATTCCTCAGCCTCTGTCCATCAAGACACCCCGTTCCCTaGAGCGTGCAGGAACTGGGG +
Preference number: 4 (lower is better)
Translates to: CPRTLSGEARKFLSLCPSRHPVP*SVQELG
Trigger: CCCCAGTTCCTGCACGCTCCAGGGAACGGGGTGTCT...TGATGGACAGAGGCTGAGGAATTTCCTGGCTTCCCCAGATAGTGTCCTGGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGCACTCCTGTGCAACCTaGGCATCTCTCTACATCCCC +
Preference number: 4 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWHSCAT*ASLYIP
Trigger: GGGGATGTAGAGAGATGCCCAGGTTGCACAGGAGTG...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGGGGAGCTAGCTGGCATGGAGCACTaGGGCTTAAGCAAGCGCTTG +
Preference number: 4 (lower is better)
Translates to: NLLTLLPALKASQGTGELAGMEH*GLSKRL
Trigger: CAAGCGCTTGCTTAAGCCCCAGTGCTCCATGCCAGC...TAGCTCCCCAGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp TGCCCCCTGCCACAGCTCCACCCAGTGAGCACAGAGTCCACTCAATGCCCACCTACTCAGGCTGAAGGCTaGGGAAAGCCAAGTTTAAGG +
Preference number: 4 (lower is better)
Translates to: CPLPQLHPVSTESTQCPPTQAEG*GKPSLR
Trigger: CCTTAAACTTGGCTTTCCCCAGCCTTCAGCCTGAGT...AGGTGGGCATTGAGTGGACTCTGTGCTCACTGGGTGGAGCTGTGGCAGGGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp CCCGAACGGCACTTAGGGATTTGGCACAAAAAGGACTCCTCTCCCTCCTTTTGCGGGGAAGGGCATGGCTaGCACTGTGGTACGGGGATC +
Preference number: 4 (lower is better)
Translates to: PERHLGIWHKKDSSPSFCGEGHG*HCGTGI
Trigger: GATCCCCGTACCACAGTGCCAGCCATGCCCTTCCCC...GCAAAAGGAGGGAGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGTTCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp TGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCCGAACGGCACTTAGGGAGGCCACTAAACCATaGCATGTTGCTGGTAGGGAA +
Preference number: 4 (lower is better)
Translates to: CHRQGESCCTHGPRTALREATKP*HVAGRE
Trigger: TTCCCTACCAGCAACATGTCATGGTTTAGTGGCCTC...CCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307885.4
CDS-3UTR TCA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTGCAGTGTTGCCCGAGTaGTGTGGATGCGGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPAVLPE*CGCGQP
Trigger: GGGCTGGCCGCATCCACATCACTCGGGCAACACTGC...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp GGGGAAGTGCCCAGGACCAGTGCTGGGGATGCAGGTATTGCAAAGGCAAGCATGCACAGATCAGCACGGTaGTTAGCAGCAGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: GEVPRTSAGDAGIAKASMHRSAR*LAAAGR
Trigger: TCTTCCTGCTGCTGCTAATCACCGTGCTGATCTGTG...CATGCTTGCCTTTGCAATACCTGCATCCCCAGCACTGGTCCTGGGCACTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp GGGGAAGTGCCCAGGACCAGTGCTGGGGATGCAGGTATTGCAAAGGCAAGCATGGCAGCATGTTCCCGATaGAGTACTCAGGAAAGCTGC +
Preference number: 4 (lower is better)
Translates to: GEVPRTSAGDAGIAKASMAACSR*STQESC
Trigger: GCAGCTTTCCTGAGTACTTCATCGGGAACATGCTGC...CATGCTTGCCTTTGCAATACCTGCATCCCCAGCACTGGTCCTGGGCACTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307885.4
ENST00000357869.8
CDS-3UTR TCA 90 bp TGCCCCCTGCCACAGCTCCACCCAGTGAGCACAGAGTCCACTCAATGCCCACCTGCAGCACCAAATAGATaGGCCCCAAGACAAAGATCA +
Preference number: 4 (lower is better)
Translates to: CPLPQLHPVSTESTQCPPAAPNR*APRQRS
Trigger: TGATCTTTGTCTTGGGGCTCATCTATTTGGTGCTGC...AGGTGGGCATTGAGTGGACTCTGTGCTCACTGGGTGGAGCTGTGGCAGGGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGCTGGCGTTCAGCCCTaGGGCAGCCATGTAGGTGCT +
Preference number: 4 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLAGVQP*GSHVGA
Trigger: AGCACCTACATGGCTGCCTCAGGGCTGAACGCCAGC...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCTTGTTTTCCAGCTTaGGGGCAGACGAGCATGATC +
Preference number: 4 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWPCFPA*GQTSMI
Trigger: GATCATGCTCGTCTGCCCTCAAGCTGGAAAACAAGG...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGAGCACTGGGGCAGAGTaGCCTGATCTGGACCCCGAC +
Preference number: 4 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLSTGAE*PDLDPD
Trigger: GTCGGGGTCCAGATCAGGTCACTCTGCCCCAGTGCT...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp AAGTTTAAGGTTCCTCTTCCCCACCCCGTAGTACCAGTATCCAGGTCCTCAGAGAGCACTGGGGCAGAGTaGCCTGATCTGGACCCCGAC +
Preference number: 4 (lower is better)
Translates to: KFKVPLPHPVVPVSRSSESTGAE*PDLDPD
Trigger: GTCGGGGTCCAGATCAGGTCACTCTGCCCCAGTGCT...CTCTGAGGACCTGGATACTGGTACTACGGGGTGGGGAAGAGGAACCTTAAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp TGTCCCAGGACACTATCTGGGGAAGCCAGGAAATTCCTCAGCCTCTGTCCATCACCGGGTGGCAGAGGTTaGAGTGAGCAAAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: CPRTLSGEARKFLSLCPSPGGRG*SEQRSR
Trigger: GCGCGATCTTTGCTCACTGCAACCTCTGCCACCCGG...TGATGGACAGAGGCTGAGGAATTTCCTGGCTTCCCCAGATAGTGTCCTGGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307885.4
CDS-3UTR GCA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTGGGGCTGGGTGGCTCTaGATCCCGGAGGCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPGAGWL*IPEAAH
Trigger: ATGAGCTGCCTCCGGGATGCAGAGCCACCCAGCCCC...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp CTTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATTGGCCGAACGGAACTaGTTCGACTGGAACACCTGC +
Preference number: 4 (lower is better)
Translates to: LKQALGSLPQTGRVMLHTLAERN*FDWNTC
Trigger: GCAGGTGTTCCAGTCGAAGCAGTTCCGTTCGGCCAA...TGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp CTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGGCACAGGCCAACAGTaGCACATAGGCAGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LEFNLLTLLPALKASQGTGTGQQ*HIGRLR
Trigger: CCTCAGCCTGCCTATGTGGCACTGTTGGCCTGTGCC...AGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp CTTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATCCTGGCGGAAGCTATaGCGGTTACACACCACCATG +
Preference number: 4 (lower is better)
Translates to: LKQALGSLPQTGRVMLHTSWRKL*RLHTTM
Trigger: CATGGTGGTGTGTAACCGGCATAGCTTCCGCCAGGA...TGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGGGGAGCTATCCTGGCGGAAGCTATaGCGGTTACACACCACCATG +
Preference number: 4 (lower is better)
Translates to: NLLTLLPALKASQGTGELSWRKL*RLHTTM
Trigger: CATGGTGGTGTGTAACCGGCATAGCTTCCGCCAGGA...TAGCTCCCCAGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AAGTTTAAGGTTCCTCTTCCCCACCCCGTAGTACCAGTATCCAGGTCCTCAGAGGCACTGCCGCCAGGATaGCCAGCACCACGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: KFKVPLPHPVVPVSRSSEALPPG*PAPRSS
Trigger: TGAGCTACGTGGTGCTGGGCATCCTGGCGGCAGTGC...CTCTGAGGACCTGGATACTGGTACTACGGGGTGGGGAAGAGGAACCTTAAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AAGTTTAAGGTTCCTCTTCCCCACCCCGTAGTACCAGTATCCAGGTCCTCAGAGTGCCGATTCTCATGCTaGAGGTGGAGCCGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: KFKVPLPHPVVPVSRSSECRFSC*RWSRAW
Trigger: CCAGGCCCGGCTCCACCTGCAGCATGAGAATCGGCA...CTCTGAGGACCTGGATACTGGTACTACGGGGTGGGGAAGAGGAACCTTAAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGGGGAGCTAATCTCCATGGCAACGTaGTGGGGCAATACCGACAGC +
Preference number: 4 (lower is better)
Translates to: NLLTLLPALKASQGTGELISMAT*WGNTDS
Trigger: GCTGTCGGTATTGCCCCAGCACGTTGCCATGGAGAT...TAGCTCCCCAGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp GGGGAAGTGCCCAGGACCAGTGCTGGGGATGCAGGTATTGCAAAGGCAAGCATGGACCACACATCGAACTaGCATTTCCGCAAGCCAAGG +
Preference number: 4 (lower is better)
Translates to: GEVPRTSAGDAGIAKASMDHTSN*HFRKPR
Trigger: CCTTGGCTTGCGGAAATGGCAGTTCGATGTGTGGTC...CATGCTTGCCTTTGCAATACCTGCATCCCCAGCACTGGTCCTGGGCACTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp CTTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACACAGGTACTGCAGTGTTaGCCGAGTGATGTGGATGCG +
Preference number: 4 (lower is better)
Translates to: LKQALGSLPQTGRVMLHTQVLQC*PSDVDA
Trigger: CGCATCCACATCACTCGGGCAACACTGCAGTACCTG...TGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTATTGGCCCGAGTCCGCTaGAGCTTGGCCAGCATGGCC +
Preference number: 4 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLLARVR*SLASMA
Trigger: GGCCATGCTGGCCAAGCTGCAGCGGACTCGGGCCAA...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp GGGGAAGTGCCCAGGACCAGTGCTGGGGATGCAGGTATTGCAAAGGCAAGCATGGCAGCAGCAGGAAGATaGTGGCATAGATCCCAAGCA +
Preference number: 4 (lower is better)
Translates to: GEVPRTSAGDAGIAKASMAAAGR*WHRSQA
Trigger: TGCTTGGGATCTATGCCAGCATCTTCCTGCTGCTGC...CATGCTTGCCTTTGCAATACCTGCATCCCCAGCACTGGTCCTGGGCACTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp CCCGAACGGCACTTAGGGATTTGGCACAAAAAGGACTCCTCTCCCTCCTTTTGCGTGAGCGGACAATGCTaGGGGACAGACGTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: PERHLGIWHKKDSSPSFCVSGQC*GTDVAG
Trigger: CCCTGCAACGTCTGTCCCGCAGCATTGTCCGCTCAC...GCAAAAGGAGGGAGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGTTCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGGCAGGACGGAAAAGATaGCAACTGCGGTGCTATGTG +
Preference number: 4 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWAGRKR*QLRCYV
Trigger: CACATAGCACCGCAGTTGGCATCTTTTCCGTCCTGC...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp CTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTCCACCTGATCGTAGGTaGTGGCGTTCAGCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: LEFNLLTLLPALKASQGTPPDRR*WRSALR
Trigger: CCTCAGGGCTGAACGCCAGCACCTACGATCAGGTGG...AGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp CCCGAACGGCACTTAGGGATTTGGCACAAAAAGGACTCCTCTCCCTCCTTTTGCAGCCCCGATGACACCTaGCACGACTGGGCCCATGTT +
Preference number: 4 (lower is better)
Translates to: PERHLGIWHKKDSSPSFCSPDDT*HDWAHV
Trigger: AACATGGGCCCAGTCGTGGCAGGTGTCATCGGGGCT...GCAAAAGGAGGGAGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGTTCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp TGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCCGAACGGCACTTAGGGATCCAAGCACAGCCTaGTGGGATGTTCCCTTTTGT +
Preference number: 4 (lower is better)
Translates to: CHRQGESCCTHGPRTALRDPSTA*WDVPFC
Trigger: ACAAAAGGGAACATCCCAGCAGGCTGTGCTTGGATC...CCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp GGGGAAGTGCCCAGGACCAGTGCTGGGGATGCAGGTATTGCAAAGGCAAGCATGGACCAGTGCTGGGGATaGAGGTATTGCAAAGGCAAG +
Preference number: 4 (lower is better)
Translates to: GEVPRTSAGDAGIAKASMDQCWG*RYCKGK
Trigger: CTTGCCTTTGCAATACCTGCATCCCCAGCACTGGTC...CATGCTTGCCTTTGCAATACCTGCATCCCCAGCACTGGTCCTGGGCACTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGCAGAAGAGGAAGAGATaGTCCATGCCCCCTTGTCAG +
Preference number: 4 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWQKRKR*SMPPCQ
Trigger: CTGACAAGGGGGCATGGAGCATCTCTTCCTCTTCTG...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp TGTCCCAGGACACTATCTGGGGAAGCCAGGAAATTCCTCAGCCTCTGTCCATCACAGGGAGAGTCATGCTaGACACATGGCCCCCGAACG +
Preference number: 4 (lower is better)
Translates to: CPRTLSGEARKFLSLCPSQGESC*THGPRT
Trigger: CGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTG...TGATGGACAGAGGCTGAGGAATTTCCTGGCTTCCCCAGATAGTGTCCTGGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp GGGAATCTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGAGGGGCAAGTGCACTaGCTGCCCCTTCCACTCCCA +
Preference number: 4 (lower is better)
Translates to: GNLEFNLLTLLPALKASQEGQVH*LPLPLP
Trigger: TGGGAGTGGAAGGGGCAGGCAGTGCACTTGCCCCTC...TTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAGATTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AAGTTTAAGGTTCCTCTTCCCCACCCCGTAGTACCAGTATCCAGGTCCTCAGAGGAGGGGCAAGTGCACTaGCTGCCCCTTCCACTCCCA +
Preference number: 4 (lower is better)
Translates to: KFKVPLPHPVVPVSRSSEEGQVH*LPLPLP
Trigger: TGGGAGTGGAAGGGGCAGGCAGTGCACTTGCCCCTC...CTCTGAGGACCTGGATACTGGTACTACGGGGTGGGGAAGAGGAACCTTAAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTCTCCTTGCCCTTGCCTaGGCCGCCCCTCCGGATGAA +
Preference number: 4 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPLLALA*AAPPDE
Trigger: TTCATCCGGAGGGGCGGCCCAGGCAAGGGCAAGGAG...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp CTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTACAGGCGCTCCAGCTTaGCCGAACGGAACTGCTTCG +
Preference number: 4 (lower is better)
Translates to: LEFNLLTLLPALKASQGTTGAPA*PNGTAS
Trigger: CGAAGCAGTTCCGTTCGGCCAAGCTGGAGCGCCTGT...AGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGCATCAGCCCGCATGCGGATaGGGAGGAGCGTGTAGGCGA +
Preference number: 4 (lower is better)
Translates to: RKFLSLCPSNPRQFKCWHQPACG*GGACRR
Trigger: TCGCCTACACGCTCCTCCCCATCCGCATGCGGGCTG...ATGCCAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTATGCACGCGCCCGCTGTaGATGCCCACGCGCATGTTC +
Preference number: 4 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLCTRPL*MPTRMF
Trigger: GAACATGCGCGTGGGCATCCACAGCGGGCGCGTGCA...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AAGTTTAAGGTTCCTCTTCCCCACCCCGTAGTACCAGTATCCAGGTCCTCAGAGGCCCTTCCATGGAGTTaGCCCGAGTCCGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: KFKVPLPHPVVPVSRSSEALPWS*PESAAA
Trigger: AGCTGCAGCGGACTCGGGCCAACTCCATGGAAGGGC...CTCTGAGGACCTGGATACTGGTACTACGGGGTGGGGAAGAGGAACCTTAAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp CCCGAACGGCACTTAGGGATTTGGCACAAAAAGGACTCCTCTCCCTCCTTTTGCTCTGGCGGAAGGCCTTaGAGTCCTTGGTCCGGGAGA +
Preference number: 4 (lower is better)
Translates to: PERHLGIWHKKDSSPSFCSGGRP*SPWSGR
Trigger: TCTCCCGGACCAAGGACTCCAAGGCCTTCCGCCAGA...GCAAAAGGAGGGAGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGTTCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGGGGAGCTATCATCAATGCCCATCTaGCGGAAGGCCTTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: NLLTLLPALKASQGTGELSSMPI*RKALES
Trigger: GGACTCCAAGGCCTTCCGCCAGATGGGCATTGATGA...TAGCTCCCCAGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp TGCCCCCTGCCACAGCTCCACCCAGTGAGCACAGAGTCCACTCAATGCCCACCTGGGAAGATGAGAAGCTaGATGAAGCAGATGAAGCAG +
Preference number: 4 (lower is better)
Translates to: CPLPQLHPVSTESTQCPPGKMRS*MKQMKQ
Trigger: CTGCTTCATCTGCTTCATCCAGCTTCTCATCTTCCC...AGGTGGGCATTGAGTGGACTCTGTGCTCACTGGGTGGAGCTGTGGCAGGGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AAGTTTAAGGTTCCTCTTCCCCACCCCGTAGTACCAGTATCCAGGTCCTCAGAGAGCTGCAGGTGGGCATaGTGCCCTCACACAGGGGAG +
Preference number: 4 (lower is better)
Translates to: KFKVPLPHPVVPVSRSSESCRWA*CPHTGE
Trigger: CTCCCCTGTGTGAGGGCACCATGCCCACCTGCAGCT...CTCTGAGGACCTGGATACTGGTACTACGGGGTGGGGAAGAGGAACCTTAAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307885.4
ENST00000357869.8
CDS-3UTR CCA 90 bp TGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCCGAACGGCACTTAGGCTTCAGCTGAATTTGTaGCTGGGCCCTGTTAACTGC +
Preference number: 4 (lower is better)
Translates to: CHRQGESCCTHGPRTALRLQLNL*LGPVNC
Trigger: GCAGTTAACAGGGCCCAGCCACAAATTCAGCTGAAG...CCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGCAAAGGCTGGAAGATTaGAGAGGGAACAGCCCTACC +
Preference number: 4 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWQRLED*RGNSPT
Trigger: GGTAGGGCTGTTCCCTCTCCAATCTTCCAGCCTTTG...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AAGTTTAAGGTTCCTCTTCCCCACCCCGTAGTACCAGTATCCAGGTCCTCAGAGAGACACCCCGTTCCCTaGAGCGTGCAGGAACTGGGG +
Preference number: 4 (lower is better)
Translates to: KFKVPLPHPVVPVSRSSERHPVP*SVQELG
Trigger: CCCCAGTTCCTGCACGCTCCAGGGAACGGGGTGTCT...CTCTGAGGACCTGGATACTGGTACTACGGGGTGGGGAAGAGGAACCTTAAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp TGTCCCAGGACACTATCTGGGGAAGCCAGGAAATTCCTCAGCCTCTGTCCATCAGGCCGGCCTGCTCTTTaGCACCTGCAGGTGAACTTC +
Preference number: 4 (lower is better)
Translates to: CPRTLSGEARKFLSLCPSGRPAL*HLQVNF
Trigger: GAAGTTCACCTGCAGGTGCCAAAGAGCAGGCCGGCC...TGATGGACAGAGGCTGAGGAATTTCCTGGCTTCCCCAGATAGTGTCCTGGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp CTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTCAGAGTGACCTGATCTaGACCCCGACGGGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: LEFNLLTLLPALKASQGTQSDLI*TPTGSS
Trigger: TGAGGACCCCGTCGGGGTCCAGATCAGGTCACTCTG...AGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp TGTCCCAGGACACTATCTGGGGAAGCCAGGAAATTCCTCAGCCTCTGTCCATCAAGGAGAGAGGCAACCTaGGGTGGAGAGCTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: CPRTLSGEARKFLSLCPSRREAT*GGELRS
Trigger: GCTCCTCAGCTCTCCACCCCAGGTTGCCTCTCTCCT...TGATGGACAGAGGCTGAGGAATTTCCTGGCTTCCCCAGATAGTGTCCTGGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp CTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGCATGGCTGGCACTGTaGTACGGGGATCCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: LEFNLLTLLPALKASQGTAWLAL*YGDPGC
Trigger: ACACCCTGGATCCCCGTACCACAGTGCCAGCCATGC...AGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR CAA 72 bp GGGAAGTGCCCAGGACCAGTGCTGGGGATGCAGGTATaGCAAAGGCAAGCATGGAATAGGCACTCCTCATGC +
Preference number: 4 (lower is better)
Translates to: GKCPGPVLGMQV*QRQAWNRHSSC
Trigger: GCATGAGGAGTGCCTATTCCATGCTTGCCTTTGCAATACCTGCATCCCCAGCACTGGTCCTGGGCACTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTGGTTACACACCACCATaGGCCCCACGAACAGGGCGG +
Preference number: 4 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPGYTPP*APRTGR
Trigger: CCGCCCTGTTCGTGGGGCTCATGGTGGTGTGTAACC...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTAGGTTACACACCACCATaGGCCCCACGAACAGGGCGG +
Preference number: 4 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLGYTPP*APRTGR
Trigger: CCGCCCTGTTCGTGGGGCTCATGGTGGTGTGTAACC...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp GGGAATCTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGCTCATTCAGGGTCATaGCCAGCTCCTGCGCAGTGC +
Preference number: 4 (lower is better)
Translates to: GNLEFNLLTLLPALKASQAHSGS*PAPAQC
Trigger: GCACTGCGCAGGAGCTGGTCATGACCCTGAATGAGC...TTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAGATTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGAGTCCCCCAAGATCTTaGTCCTCAGGCAGTGATTCT +
Preference number: 4 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWSPPRS*SSGSDS
Trigger: AGAATCACTGCCTGAGGATCAAGATCTTGGGGGACT...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp CTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGGCTGGCGCCCAGGATaGGGAAAGTCTCAATGTGCT +
Preference number: 4 (lower is better)
Translates to: LEFNLLTLLPALKASQGTGWRPG*GKSQCA
Trigger: AGCACATTGAGACTTTCCTCATCCTGGGCGCCAGCC...AGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp CTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTCCTCTCTCTGGAAGGTaGGCAGAAACCGGCGCACAT +
Preference number: 4 (lower is better)
Translates to: LEFNLLTLLPALKASQGTPLSGR*AETGAH
Trigger: ATGTGCGCCGGTTTCTGCTCACCTTCCAGAGAGAGG...AGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTAGGTGCTATGTGCCCGTaGGCGGACAATGCTGCGGGA +
Preference number: 4 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLGAMCP*ADNAAG
Trigger: TCCCGCAGCATTGTCCGCTCACGGGCACATAGCACC...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp AACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGGGGAGCTAGCAGGTGGCAGGCAGTaGTGTCAGCAGGTGTTAAAT +
Preference number: 4 (lower is better)
Translates to: NLLTLLPALKASQGTGELAGGRQ*CQQVLN
Trigger: ATTTAACACCTGCTGACATCACTGCCTGCCACCTGC...TAGCTCCCCAGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307885.4
ENST00000357869.8
CDS-3UTR TCA 90 bp TGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCCGAACGGCACTTAGGGCAGCACCAAATAGATaGGCCCCAAGACAAAGATCA +
Preference number: 4 (lower is better)
Translates to: CHRQGESCCTHGPRTALRAAPNR*APRQRS
Trigger: TGATCTTTGTCTTGGGGCTCATCTATTTGGTGCTGC...CCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp CTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTCAGGGGTCATATATTTaGGGGCCACCCTCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: LEFNLLTLLPALKASQGTQGSYI*GPPSLQ
Trigger: CTGCAGGGAGGGTGGCCCTCAAATATATGACCCCTG...AGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp AGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGCATGCTGGCGTTCAGCCCTaGGGCAGCCATGTAGGTGCT +
Preference number: 4 (lower is better)
Translates to: RKFLSLCPSNPRQFKCWHAGVQP*GSHVGA
Trigger: AGCACCTACATGGCTGCCTCAGGGCTGAACGCCAGC...ATGCCAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp TGTCCCAGGACACTATCTGGGGAAGCCAGGAAATTCCTCAGCCTCTGTCCATCAGCTTCATCTGCTCCATaGGCCGCATGGCGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: CPRTLSGEARKFLSLCPSASSAP*AAWRSQ
Trigger: CTGACTACGCCATGCGGCTCATGGAGCAGATGAAGC...TGATGGACAGAGGCTGAGGAATTTCCTGGCTTCCCCAGATAGTGTCCTGGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp CTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGCTTCATCTGCTCCATaGGCCGCATGGCGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: LEFNLLTLLPALKASQGTASSAP*AAWRSQ
Trigger: CTGACTACGCCATGCGGCTCATGGAGCAGATGAAGC...AGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp CCCGAACGGCACTTAGGGATTTGGCACAAAAAGGACTCCTCTCCCTCCTTTTGCCTTGGTCCCTTCAGCTaGATTTGTGGCTGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: PERHLGIWHKKDSSPSFCLGPFS*ICGWAL
Trigger: CAGGGCCCAGCCACAAATTCAGCTGAAGGGACCAAG...GCAAAAGGAGGGAGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGTTCGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp GGGAATCTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGAGGGCAGACGAGCATaGTCCAAGCACAGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: GNLEFNLLTLLPALKASQEGRRA*SKHSLL
Trigger: CAGCAGGCTGTGCTTGGATCATGCTCGTCTGCCCTC...TTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAGATTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTACCTGGGGTGGAGAGCTaGGGAGCAGGAGCACAAGGA +
Preference number: 4 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLPGVES*GAGAQG
Trigger: TCCTTGTGCTCCTGCTCCTCAGCTCTCCACCCCAGG...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCTCCTTCTGCCATaGCTAATGAAGTACCTGATG +
Preference number: 4 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWPLLLP*LMKYLM
Trigger: CATCAGGTACTTCATTAGTCATGGCAGAAGGAGGGG...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp GGGGAAGTGCCCAGGACCAGTGCTGGGGATGCAGGTATTGCAAAGGCAAGCATGCCCCTCCTTCTGCCATaGCTAATGAAGTACCTGATG +
Preference number: 4 (lower is better)
Translates to: GEVPRTSAGDAGIAKASMPLLLP*LMKYLM
Trigger: CATCAGGTACTTCATTAGTCATGGCAGAAGGAGGGG...CATGCTTGCCTTTGCAATACCTGCATCCCCAGCACTGGTCCTGGGCACTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp GGGGAAGTGCCCAGGACCAGTGCTGGGGATGCAGGTATTGCAAAGGCAAGCATGGAGGTCTTCCCACTCTaGTCTACTTATACCCTCACC +
Preference number: 4 (lower is better)
Translates to: GEVPRTSAGDAGIAKASMEVFPL*STYTLT
Trigger: GGTGAGGGTATAAGTAGATCAGAGTGGGAAGACCTC...CATGCTTGCCTTTGCAATACCTGCATCCCCAGCACTGGTCCTGGGCACTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGGGGAGCTAAACGCTTCTGCCCATTaGGTTCACCCCAGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: NLLTLLPALKASQGTGELNASAH*VHPRLF
Trigger: AAACAGCCTGGGGTGAACGCAATGGGCAGAAGCGTT...TAGCTCCCCAGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp GGGAATCTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAATCATATAGCGGGGCGTaGAGAAGCCACCTGCCCGAG +
Preference number: 4 (lower is better)
Translates to: GNLEFNLLTLLPALKASQSYSGA*RSHLPE
Trigger: CTCGGGCAGGTGGCTTCTGCACGCCCCGCTATATGA...TTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAGATTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGTCATATAGCGGGGCGTaGAGAAGCCACCTGCCCGAG +
Preference number: 4 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLSYSGA*RSHLPE
Trigger: CTCGGGCAGGTGGCTTCTGCACGCCCCGCTATATGA...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGTTCGACTGGAACACCTaGACCAGACGGCGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLFDWNT*TRRRQQ
Trigger: CTGCTGGCGCCGTCTGGTGCAGGTGTTCCAGTCGAA...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGGGGAGCTATCAGCAGCGTCAGGCTaGTCTGGTTCATCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: NLLTLLPALKASQGTGELSAASG*SGSSGR
Trigger: TCTTCCAGATGAACCAGAGCAGCCTGACGCTGCTGA...TAGCTCCCCAGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AAGTTTAAGGTTCCTCTTCCCCACCCCGTAGTACCAGTATCCAGGTCCTCAGAGGGCACAGGCCAACAGTaGCACATAGGCAGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: KFKVPLPHPVVPVSRSSEGTGQQ*HIGRLR
Trigger: CCTCAGCCTGCCTATGTGGCACTGTTGGCCTGTGCC...CTCTGAGGACCTGGATACTGGTACTACGGGGTGGGGAAGAGGAACCTTAAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTAGCACTGCCGCCAGGATaGCCAGCACCACGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLALPPG*PAPRSS
Trigger: TGAGCTACGTGGTGCTGGGCATCCTGGCGGCAGTGC...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp CTTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACAGCGCTGAGACACCTCTaGTGGATAGTGTGTGCAGAT +
Preference number: 4 (lower is better)
Translates to: LKQALGSLPQTGRVMLHTALRHL*WIVCAD
Trigger: ATCTGCACACACTATCCAGCAGAGGTGTCTCAGCGC...TGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AAGTTTAAGGTTCCTCTTCCCCACCCCGTAGTACCAGTATCCAGGTCCTCAGAGAGCAGCCGCTCCTGCTaGCGATTCTCATGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: KFKVPLPHPVVPVSRSSESSRSC*RFSCCR
Trigger: CCTGCAGCATGAGAATCGGCAGCAGGAGCGGCTGCT...CTCTGAGGACCTGGATACTGGTACTACGGGGTGGGGAAGAGGAACCTTAAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AAGTTTAAGGTTCCTCTTCCCCACCCCGTAGTACCAGTATCCAGGTCCTCAGAGAGCAGCAGCCGCTCCTaGTGCCGATTCTCATGCTGC +
Preference number: 4 (lower is better)
Translates to: KFKVPLPHPVVPVSRSSESSSRS*CRFSCC
Trigger: GCAGCATGAGAATCGGCAGCAGGAGCGGCTGCTGCT...CTCTGAGGACCTGGATACTGGTACTACGGGGTGGGGAAGAGGAACCTTAAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp CTTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACAGCAGCAGCAGGAAGATaGTGGCATAGATCCCAAGCA +
Preference number: 4 (lower is better)
Translates to: LKQALGSLPQTGRVMLHTAAAGR*WHRSQA
Trigger: TGCTTGGGATCTATGCCAGCATCTTCCTGCTGCTGC...TGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp CCCGAACGGCACTTAGGGATTTGGCACAAAAAGGACTCCTCTCCCTCCTTTTGCAGATGCCAACTGCGGTaGTATGTGCCCGTGAGCGGA +
Preference number: 4 (lower is better)
Translates to: PERHLGIWHKKDSSPSFCRCQLR*YVPVSG
Trigger: TCCGCTCACGGGCACATAGCACCGCAGTTGGCATCT...GCAAAAGGAGGGAGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGTTCGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGGGGAGCTAGCAGGACGGAAAAGATaGCAACTGCGGTGCTATGTG +
Preference number: 4 (lower is better)
Translates to: NLLTLLPALKASQGTGELAGRKR*QLRCYV
Trigger: CACATAGCACCGCAGTTGGCATCTTTTCCGTCCTGC...TAGCTCCCCAGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp TGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCCGAACGGCACTTAGGTTGGGCAGAATGTTATaGAGCAGCCTCCGGTTGTAT +
Preference number: 4 (lower is better)
Translates to: CHRQGESCCTHGPRTALRLGRML*SSLRLY
Trigger: ATACAACCGGAGGCTGCTGCATAACATTCTGCCCAA...CCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp CTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTAGTAGAGTTCATCATTaGGGCGCTCCCGGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: LEFNLLTLLPALKASQGTSRVHH*GAPGPG
Trigger: TCCTGGCCCGGGAGCGCCGCAATGATGAACTCTACT...AGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp TGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCCGAACGGCACTTAGGGACACCCTCATTGTTTaGCTCCAGCTCCACATAGAA +
Preference number: 4 (lower is better)
Translates to: CHRQGESCCTHGPRTALRDTLIV*LQLHIE
Trigger: TTCTATGTGGAGCTGGAGGCAAACAATGAGGGTGTC...CCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGCCACCTGATCGTAGGTaGTGGCGTTCAGCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLPPDRR*WRSALR
Trigger: CCTCAGGGCTGAACGCCAGCACCTACGATCAGGTGG...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp CTTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATTGATGTGCTTCATCTaGTCCATGAGCCGCATGGCG +
Preference number: 4 (lower is better)
Translates to: LKQALGSLPQTGRVMLHTLMCFI*SMSRMA
Trigger: CGCCATGCGGCTCATGGAGCAGATGAAGCACATCAA...TGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp GGGAATCTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAAGCCCCGATGACACCTaGCACGACTGGGCCCATGTT +
Preference number: 4 (lower is better)
Translates to: GNLEFNLLTLLPALKASQSPDDT*HDWAHV
Trigger: AACATGGGCCCAGTCGTGGCAGGTGTCATCGGGGCT...TTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAGATTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp CTTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACAACAGAGTCCACTCAATaGCCACCTTGGTCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: LKQALGSLPQTGRVMLHTTESTQ*PPWSLQ
Trigger: CTGAAGGGACCAAGGTGGGCATTGAGTGGACTCTGT...TGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGGATCCAAGCACAGCCTaGTGGGATGTTCCCTTTTGT +
Preference number: 4 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWDPSTA*WDVPFC
Trigger: ACAAAAGGGAACATCCCAGCAGGCTGTGCTTGGATC...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp CTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTAGTGCCCAGGACCAGTaGTGGGGATGCAGGTATTGC +
Preference number: 4 (lower is better)
Translates to: LEFNLLTLLPALKASQGTSAQDQ*WGCRYC
Trigger: GCAATACCTGCATCCCCAGCACTGGTCCTGGGCACT...AGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGATGAGGAGGGGCAAGTaGACTGCCTGCCCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLMRRGK*TACPFH
Trigger: GTGGAAGGGGCAGGCAGTGCACTTGCCCCTCCTCAT...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AAGTTTAAGGTTCCTCTTCCCCACCCCGTAGTACCAGTATCCAGGTCCTCAGAGATGAGGAGGGGCAAGTaGACTGCCTGCCCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: KFKVPLPHPVVPVSRSSEMRRGK*TACPFH
Trigger: GTGGAAGGGGCAGGCAGTGCACTTGCCCCTCCTCAT...CTCTGAGGACCTGGATACTGGTACTACGGGGTGGGGAAGAGGAACCTTAAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp CTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTCGGAACTGCTTCGACTaGAACACCTGCACCAGACGG +
Preference number: 4 (lower is better)
Translates to: LEFNLLTLLPALKASQGTRNCFD*NTCTRR
Trigger: CCGTCTGGTGCAGGTGTTCCAGTCGAAGCAGTTCCG...AGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AAGTTTAAGGTTCCTCTTCCCCACCCCGTAGTACCAGTATCCAGGTCCTCAGAGACAGGCGCTCCAGCTTaGCCGAACGGAACTGCTTCG +
Preference number: 4 (lower is better)
Translates to: KFKVPLPHPVVPVSRSSETGAPA*PNGTAS
Trigger: CGAAGCAGTTCCGTTCGGCCAAGCTGGAGCGCCTGT...CTCTGAGGACCTGGATACTGGTACTACGGGGTGGGGAAGAGGAACCTTAAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGGGGAGCTACTGAGACACCTCTGCTaGATAGTGTGTGCAGATGCC +
Preference number: 4 (lower is better)
Translates to: NLLTLLPALKASQGTGELLRHLC*IVCADA
Trigger: GGCATCTGCACACACTATCCAGCAGAGGTGTCTCAG...TAGCTCCCCAGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp GGGAATCTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGAGTCCGCTGCAGCTTaGCCAGCATGGCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: GNLEFNLLTLLPALKASQESAAA*PAWPSP
Trigger: AGGAGAAGGCCATGCTGGCCAAGCTGCAGCGGACTC...TTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAGATTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGAGTCCGCTGCAGCTTaGCCAGCATGGCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLESAAA*PAWPSP
Trigger: AGGAGAAGGCCATGCTGGCCAAGCTGCAGCGGACTC...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTAGCCCTTCCATGGAGTTaGCCCGAGTCCGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLALPWS*PESAAA
Trigger: AGCTGCAGCGGACTCGGGCCAACTCCATGGAAGGGC...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp GGGAATCTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGCATCAGCCCTTCCATaGAGTTGGCCCGAGTCCGCT +
Preference number: 4 (lower is better)
Translates to: GNLEFNLLTLLPALKASQASALP*SWPESA
Trigger: AGCGGACTCGGGCCAACTCCATGGAAGGGCTGATGC...TTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAGATTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp CTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTAGGCCTTGGAGTCCTTaGTCCGGGAGAAGGCACGAT +
Preference number: 4 (lower is better)
Translates to: LEFNLLTLLPALKASQGTRPWSP*SGRRHD
Trigger: ATCGTGCCTTCTCCCGGACCAAGGACTCCAAGGCCT...AGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp GGGAATCTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAATCTGGCGGAAGGCCTTaGAGTCCTTGGTCCGGGAGA +
Preference number: 4 (lower is better)
Translates to: GNLEFNLLTLLPALKASQSGGRP*SPWSGR
Trigger: TCTCCCGGACCAAGGACTCCAAGGCCTTCCGCCAGA...TTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAGATTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp CCCGAACGGCACTTAGGGATTTGGCACAAAAAGGACTCCTCTCCCTCCTTTTGCGGGTTCAGGGCATCTTaGGTGCCCCGGTTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: PERHLGIWHKKDSSPSFCGFRAS*VPRLSL
Trigger: CAAAGACAACCGGGGCACCCAAGATGCCCTGAACCC...GCAAAAGGAGGGAGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGTTCGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp TGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCCGAACGGCACTTAGGGGGAAGATGAGAAGCTaGATGAAGCAGATGAAGCAG +
Preference number: 4 (lower is better)
Translates to: CHRQGESCCTHGPRTALRGKMRS*MKQMKQ
Trigger: CTGCTTCATCTGCTTCATCCAGCTTCTCATCTTCCC...CCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp GGGGAAGTGCCCAGGACCAGTGCTGGGGATGCAGGTATTGCAAAGGCAAGCATGCATCAGGGTGGAGTGTaGGAAGATGAGAAGCTGGAT +
Preference number: 4 (lower is better)
Translates to: GEVPRTSAGDAGIAKASMHQGGV*EDEKLD
Trigger: ATCCAGCTTCTCATCTTCCCACACTCCACCCTGATG...CATGCTTGCCTTTGCAATACCTGCATCCCCAGCACTGGTCCTGGGCACTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCAAGACAAAGATCATaGCCAACTTCCCGATGCTGC +
Preference number: 4 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWPRQRS*PTSRCC
Trigger: GCAGCATCGGGAAGTTGGCCATGATCTTTGTCTTGG...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp CCCGAACGGCACTTAGGGATTTGGCACAAAAAGGACTCCTCTCCCTCCTTTTGCCACCCTCCCTGCAGCTaGACAGTCCAGCCCATCAAA +
Preference number: 4 (lower is better)
Translates to: PERHLGIWHKKDSSPSFCHPPCS*TVQPIK
Trigger: TTTGATGGGCTGGACTGTCCAGCTGCAGGGAGGGTG...GCAAAAGGAGGGAGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGTTCGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp GGGAATCTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAACCTGATCGTAGGTGCTaGCGTTCAGCCCTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: GNLEFNLLTLLPALKASQPDRRC*RSALRQ
Trigger: CTGCCTCAGGGCTGAACGCCAGCACCTACGATCAGG...TTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAGATTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp CCCGAACGGCACTTAGGGATTTGGCACAAAAAGGACTCCTCTCCCTCCTTTTGCGACACCTGCCACGACTaGGCCCATGTTCAGCCCAAT +
Preference number: 4 (lower is better)
Translates to: PERHLGIWHKKDSSPSFCDTCHD*AHVQPN
Trigger: ATTGGGCTGAACATGGGCCCAGTCGTGGCAGGTGTC...GCAAAAGGAGGGAGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGTTCGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGGGGAGCTAGGATGTTCCCTTTTGTaGTTAGCAGGGTCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: NLLTLLPALKASQGTGELGCSLL*LAGSGG
Trigger: GCCTCCAGACCCTGCTAACCACAAAAGGGAACATCC...TAGCTCCCCAGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCTTTGTTCCCCTTTaGGGACAGATCATGGGACTA +
Preference number: 4 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWPFVPL*GQIMGL
Trigger: TAGTCCCATGATCTGTCCCCAAAGGGGAACAAAGGG...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp GGGAATCTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGCCGGCCTGCTCTTTaGCACCTGCAGGTGAACTTC +
Preference number: 4 (lower is better)
Translates to: GNLEFNLLTLLPALKASQGRPAL*HLQVNF
Trigger: GAAGTTCACCTGCAGGTGCCAAAGAGCAGGCCGGCC...TTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAGATTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGAGGAGAGAGGCAACCTaGGGTGGAGAGCTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLRREAT*GGELRS
Trigger: GCTCCTCAGCTCTCCACCCCAGGTTGCCTCTCTCCT...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp CCCGAACGGCACTTAGGGATTTGGCACAAAAAGGACTCCTCTCCCTCCTTTTGCGCTGGCATGGAGCACTaGGGCTTAAGCAAGCGCTTG +
Preference number: 4 (lower is better)
Translates to: PERHLGIWHKKDSSPSFCAGMEH*GLSKRL
Trigger: CAAGCGCTTGCTTAAGCCCCAGTGCTCCATGCCAGC...GCAAAAGGAGGGAGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGTTCGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGCATGGCTGGCACTGTaGTACGGGGATCCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLAWLAL*YGDPGC
Trigger: ACACCCTGGATCCCCGTACCACAGTGCCAGCCATGC...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTGGGGAAGGGCATGGCTaGCACTGTGGTACGGGGATC +
Preference number: 4 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPGEGHG*HCGTGI
Trigger: GATCCCCGTACCACAGTGCCAGCCATGCCCTTCCCC...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp CTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTTTGATCCTCAGGCAGTaGTTCTCCGCAGCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: LEFNLLTLLPALKASQGTLILRQ*FSAASL
Trigger: CAAGCTGGCTGCGGAGAATCACTGCCTGAGGATCAA...AGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGGCTGGCGCCCAGGATaGGGAAAGTCTCAATGTGCT +
Preference number: 4 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLGWRPG*GKSQCA
Trigger: AGCACATTGAGACTTTCCTCATCCTGGGCGCCAGCC...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTTGGTCCTTCCGCAGCTaGTCAATGCTGCGGGCATCG +
Preference number: 4 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPWSFRS*SMLRAS
Trigger: CGATGCCCGCAGCATTGATCAGCTGCGGAAGGACCA...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGCTTCATCTGCTCCATaGGCCGCATGGCGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLASSAP*AAWRSQ
Trigger: CTGACTACGCCATGCGGCTCATGGAGCAGATGAAGC...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTGAGGGCAGACGAGCATaGTCCAAGCACAGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPEGRRA*SKHSLL
Trigger: CAGCAGGCTGTGCTTGGATCATGCTCGTCTGCCCTC...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp TGTCCCAGGACACTATCTGGGGAAGCCAGGAAATTCCTCAGCCTCTGTCCATCATTTTCACAGTACCAGTaGGGCCAGACACCCCGTTCC +
Preference number: 4 (lower is better)
Translates to: CPRTLSGEARKFLSLCPSFSQYQ*GQTPRS
Trigger: GGAACGGGGTGTCTGGCCTCACTGGTACTGTGAAAA...TGATGGACAGAGGCTGAGGAATTTCCTGGCTTCCCCAGATAGTGTCCTGGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp CTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTTTTTCACAGTACCAGTaGGGCCAGACACCCCGTTCC +
Preference number: 4 (lower is better)
Translates to: LEFNLLTLLPALKASQGTFSQYQ*GQTPRS
Trigger: GGAACGGGGTGTCTGGCCTCACTGGTACTGTGAAAA...AGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp AACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGGGGAGCTACATTTGGTTGATGCATaGAGATGCCCAAGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: NLLTLLPALKASQGTGELHLVDA*RCPREA
Trigger: TGCCTCCCTTGGGCATCTTCATGCATCAACCAAATG...TAGCTCCCCAGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTAGAGGCCACTAAACCATaGCATGTTGCTGCCGGCCCG +
Preference number: 4 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLEATKP*HVAAGP
Trigger: CGGGCCGGCAGCAACATGTCATGGTTTAGTGGCCTC...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTAGCAGCCGCTCCTGCTaGCGATTCTCATGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPSSRSC*RFSCCR
Trigger: CCTGCAGCATGAGAATCGGCAGCAGGAGCGGCTGCT...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp CTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTATCTCCATGGCAACGTaGTGGGGCAATACCGACAGC +
Preference number: 4 (lower is better)
Translates to: LEFNLLTLLPALKASQGTISMAT*WGNTDS
Trigger: GCTGTCGGTATTGCCCCAGCACGTTGCCATGGAGAT...AGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp CTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTCAGGTACTGCAGTGTTaGCCGAGTGATGTGGATGCG +
Preference number: 4 (lower is better)
Translates to: LEFNLLTLLPALKASQGTQVLQC*PSDVDA
Trigger: CGCATCCACATCACTCGGGCAACACTGCAGTACCTG...AGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGGGGAGCTATGCCCCGGTTGTCTTTaGTGGAATCATCAATGCCCA +
Preference number: 4 (lower is better)
Translates to: NLLTLLPALKASQGTGELCPGCL*WNHQCP
Trigger: TGGGCATTGATGATTCCAGCAAAGACAACCGGGGCA...TAGCTCCCCAGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGCATGCAGCTGATCAATGCTaGGGGCATCGATGGCACGGC +
Preference number: 4 (lower is better)
Translates to: RKFLSLCPSNPRQFKCWHAADQC*GHRWHG
Trigger: GCCGTGCCATCGATGCCCGCAGCATTGATCAGCTGC...ATGCCAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp GGGAATCTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAATCCGCAGCTGATCAATaGTGCGGGCATCGATGGCAC +
Preference number: 4 (lower is better)
Translates to: GNLEFNLLTLLPALKASQSAADQ*CGHRWH
Trigger: GTGCCATCGATGCCCGCAGCATTGATCAGCTGCGGA...TTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAGATTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AAGTTTAAGGTTCCTCTTCCCCACCCCGTAGTACCAGTATCCAGGTCCTCAGAGCTGCGGGACAGACGTTaGAGGGCCTTAGGGAACAGA +
Preference number: 4 (lower is better)
Translates to: KFKVPLPHPVVPVSRSSELRDRR*RALGNR
Trigger: TCTGTTCCCTAAGGCCCTGCAACGTCTGTCCCGCAG...CTCTGAGGACCTGGATACTGGTACTACGGGGTGGGGAAGAGGAACCTTAAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTAGTGAGCGGACAATGCTaGGGGACAGACGTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLVSGQC*GTDVAG
Trigger: CCCTGCAACGTCTGTCCCGCAGCATTGTCCGCTCAC...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp CTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTAGTACTCAGGAAAGCTaGAGGTGGGCATGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: LEFNLLTLLPALKASQGTSTQES*RWAWCP
Trigger: AGGGCACCATGCCCACCTGCAGCTTTCCTGAGTACT...AGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307885.4
ENST00000357869.8
CDS-3UTR GCA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGTTGGGCAGAATGTTATaGAGCAGCCTCCGGTTGTAT +
Preference number: 4 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWLGRML*SSLRLY
Trigger: ATACAACCGGAGGCTGCTGCATAACATTCTGCCCAA...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGAGTAGAGTTCATCATTaGGGCGCTCCCGGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLSRVHH*GAPGPG
Trigger: TCCTGGCCCGGGAGCGCCGCAATGATGAACTCTACT...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGCATAGCCCCGATGACACCTaGCACGACTGGGCCCATGTT +
Preference number: 4 (lower is better)
Translates to: RKFLSLCPSNPRQFKCWHSPDDT*HDWAHV
Trigger: AACATGGGCCCAGTCGTGGCAGGTGTCATCGGGGCT...ATGCCAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGGGGAGCTAGTAGGCATGGCAAGCTaGCATTTTAATCCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: NLLTLLPALKASQGTGELVGMAS*HFNPSG
Trigger: GCCTGAGGGATTAAAATGGCAGCTTGCCATGCCTAC...TAGCTCCCCAGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp TGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCCGAACGGCACTTAGGGGTCACCTTTCTCCATaGCCTGACCCTTTTCTATTT +
Preference number: 4 (lower is better)
Translates to: CHRQGESCCTHGPRTALRGHLSP*PDPFLF
Trigger: AAATAGAAAAGGGTCAGGGCATGGAGAAAGGTGACC...CCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGAGACAGGGAGAGTCATaGTGCACACATGGCCCCCGA +
Preference number: 4 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLRQGES*CTHGPR
Trigger: TCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCT...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp GGGAATCTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAACCCAGACAGTTCAAGTaGTGGCATGGAGCACTGGGG +
Preference number: 4 (lower is better)
Translates to: GNLEFNLLTLLPALKASQPRQFK*WHGALG
Trigger: CCCCAGTGCTCCATGCCAGCACTTGAACTGTCTGGG...TTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAGATTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTGGCAAGTGCACTGCCTaGCCCTTCCACTCCCAAACC +
Preference number: 4 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPGKCTA*PFHSQT
Trigger: GGTTTGGGAGTGGAAGGGGCAGGCAGTGCACTTGCC...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTAGGCAAGTGCACTGCCTaGCCCTTCCACTCCCAAACC +
Preference number: 4 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLGKCTA*PFHSQT
Trigger: GGTTTGGGAGTGGAAGGGGCAGGCAGTGCACTTGCC...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp TGCCCCCTGCCACAGCTCCACCCAGTGAGCACAGAGTCCACTCAATGCCCACCTAAAATTAGCCTGGTGTaGTGGTATGCACCTATAGAC +
Preference number: 4 (lower is better)
Translates to: CPLPQLHPVSTESTQCPPKISLV*WYAPID
Trigger: GTCTATAGGTGCATACCACCACACCAGGCTAATTTT...AGGTGGGCATTGAGTGGACTCTGTGCTCACTGGGTGGAGCTGTGGCAGGGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307885.4
CDS-3UTR CCA 90 bp TGTCCCAGGACACTATCTGGGGAAGCCAGGAAATTCCTCAGCCTCTGTCCATCATGGAAGAAGTACCGCTaGTACAGGCGCTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: CPRTLSGEARKFLSLCPSWKKYR*YRRSSL
Trigger: CAAGCTGGAGCGCCTGTACCAGCGGTACTTCTTCCA...TGATGGACAGAGGCTGAGGAATTTCCTGGCTTCCCCAGATAGTGTCCTGGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp CCCGAACGGCACTTAGGGATTTGGCACAAAAAGGACTCCTCTCCCTCCTTTTGCACCCACATGGAGTCCTaGCGGAAGCTATGCCGGTTA +
Preference number: 4 (lower is better)
Translates to: PERHLGIWHKKDSSPSFCTHMES*RKLCRL
Trigger: TAACCGGCATAGCTTCCGCCAGGACTCCATGTGGGT...GCAAAAGGAGGGAGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGTTCGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp GGGAATCTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAATCCTCTTTCCGTTTCTaGCTGGCGCCCAGGATGAGG +
Preference number: 4 (lower is better)
Translates to: GNLEFNLLTLLPALKASQSSFRF*LAPRMR
Trigger: CCTCATCCTGGGCGCCAGCCAGAAACGGAAAGAGGA...TTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAGATTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGTCCTCTTTCCGTTTCTaGCTGGCGCCCAGGATGAGG +
Preference number: 4 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLSSFRF*LAPRMR
Trigger: CCTCATCCTGGGCGCCAGCCAGAAACGGAAAGAGGA...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGCATGAGTCCGCTGCAGCTTaGCCAGCATGGCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: RKFLSLCPSNPRQFKCWHESAAA*PAWPSP
Trigger: AGGAGAAGGCCATGCTGGCCAAGCTGCAGCGGACTC...ATGCCAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTATCTGGCGGAAGGCCTTaGAGTCCTTGGTCCGGGAGA +
Preference number: 4 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLSGGRP*SPWSGR
Trigger: TCTCCCGGACCAAGGACTCCAAGGCCTTCCGCCAGA...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCGGTTGTCTTTGCTaGAATCATCAATGCCCATCT +
Preference number: 4 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWPGCLC*NHQCPS
Trigger: AGATGGGCATTGATGATTCCAGCAAAGACAACCGGG...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGTGCTGCGGGCATCGATaGCACGGCTCAGGAACTCAT +
Preference number: 4 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLCCGHR*HGSGTH
Trigger: ATGAGTTCCTGAGCCGTGCCATCGATGCCCGCAGCA...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTACCTGGTACAGGTCCGTaGTCACCTGGATTCGGTCGG +
Preference number: 4 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLPGTGP*SPGFGR
Trigger: CCGACCGAATCCAGGTGACCACGGACCTGTACCAGG...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp CTTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACACTTCAGCTGAATTTGTaGCTGGGCCCTGTTAACTGC +
Preference number: 4 (lower is better)
Translates to: LKQALGSLPQTGRVMLHTLQLNL*LGPVNC
Trigger: GCAGTTAACAGGGCCCAGCCACAAATTCAGCTGAAG...TGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp CTTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACACATTCTCCTGAAATATaGCCAAAGCTGGCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: LKQALGSLPQTGRVMLHTHSPEI*PKLAPQ
Trigger: CTGGGGAGCCAGCTTTGGCCATATTTCAGGAGAATG...TGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTCAGAGTGACCTGATCTaGACCCCGACGGGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPQSDLI*TPTGSS
Trigger: TGAGGACCCCGTCGGGGTCCAGATCAGGTCACTCTG...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTAAGAGGCAACCTGGGGTaGAGAGCTGAGGAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLRGNLG*RAEEQE
Trigger: CTCCTGCTCCTCAGCTCTCCACCCCAGGTTGCCTCT...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp GGGGAAGTGCCCAGGACCAGTGCTGGGGATGCAGGTATTGCAAAGGCAAGCATGCGGCACTTAGGGATTTaGCACAAAAAGGACTCCTCT +
Preference number: 4 (lower is better)
Translates to: GEVPRTSAGDAGIAKASMRHLGI*HKKDSS
Trigger: AGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCG...CATGCTTGCCTTTGCAATACCTGCATCCCCAGCACTGGTCCTGGGCACTTCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp CTTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATCCCAGGACACTATCTaGGGAAGCCAGGAAATTCCT +
Preference number: 4 (lower is better)
Translates to: LKQALGSLPQTGRVMLHTSQDTI*GSQEIP
Trigger: AGGAATTTCCTGGCTTCCCCAGATAGTGTCCTGGGA...TGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp CTTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACAGGCTTCACAAGGGACTaGGGAGCTAGAAACATGCTA +
Preference number: 4 (lower is better)
Translates to: LKQALGSLPQTGRVMLHTGFTRD*GARNML
Trigger: TAGCATGTTTCTAGCTCCCCAGTCCCTTGTGAAGCC...TGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR CAA 72 bp ATAATCCTCTCGGTAGGTAGCCCCTTGTTTTCCAGCTaGAGGGCAGACGAGCATGATCCAAGCACAGCCTGC +
Preference number: 4 (lower is better)
Translates to: IILSVGSPLFSS*RADEHDPSTAC
Trigger: GCAGGCTGTGCTTGGATCATGCTCGTCTGCCCTCAAGCTGGAAAACAAGGGGCTACCTACCGAGAGGATTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTACCTCTCTCTGGAAGGTaGGCAGAAACCGGCGCACAT +
Preference number: 4 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLPLSGR*AETGAH
Trigger: ATGTGCGCCGGTTTCTGCTCACCTTCCAGAGAGAGG...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTCCTCTCTCTGGAAGGTaGGCAGAAACCGGCGCACAT +
Preference number: 4 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPPLSGR*AETGAH
Trigger: ATGTGCGCCGGTTTCTGCTCACCTTCCAGAGAGAGG...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp TGTCCCAGGACACTATCTGGGGAAGCCAGGAAATTCCTCAGCCTCTGTCCATCACACAGATCAGCACGGTaGTTAGCAGCAGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: CPRTLSGEARKFLSLCPSHRSAR*LAAAGR
Trigger: TCTTCCTGCTGCTGCTAATCACCGTGCTGATCTGTG...TGATGGACAGAGGCTGAGGAATTTCCTGGCTTCCCCAGATAGTGTCCTGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp CCCGAACGGCACTTAGGGATTTGGCACAAAAAGGACTCCTCTCCCTCCTTTTGCGCAGGTGGCAGGCAGTaGTGTCAGCAGGTGTTAAAT +
Preference number: 4 (lower is better)
Translates to: PERHLGIWHKKDSSPSFCAGGRQ*CQQVLN
Trigger: ATTTAACACCTGCTGACATCACTGCCTGCCACCTGC...GCAAAAGGAGGGAGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGTTCGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307885.4
ENST00000357869.8
CDS-3UTR TCA 90 bp AGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGCATTGCTGGGGCCCCCATTaGGGAAGTAGGTGGTCATCT +
Preference number: 4 (lower is better)
Translates to: RKFLSLCPSNPRQFKCWHCWGPH*GSRWSS
Trigger: AGATGACCACCTACTTCCTCAATGGGGGCCCCAGCA...ATGCCAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp TGTCCCAGGACACTATCTGGGGAAGCCAGGAAATTCCTCAGCCTCTGTCCATCACCTTGTTTTCCAGCTTaGGGGCAGACGAGCATGATC +
Preference number: 4 (lower is better)
Translates to: CPRTLSGEARKFLSLCPSPCFPA*GQTSMI
Trigger: GATCATGCTCGTCTGCCCTCAAGCTGGAAAACAAGG...TGATGGACAGAGGCTGAGGAATTTCCTGGCTTCCCCAGATAGTGTCCTGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp GGGGAAGTGCCCAGGACCAGTGCTGGGGATGCAGGTATTGCAAAGGCAAGCATGATGGAAACATTCTCCTaGAATATGGCCAAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: GEVPRTSAGDAGIAKASMMETFS*NMAKAG
Trigger: GCCAGCTTTGGCCATATTTCAGGAGAATGTTTCCAT...CATGCTTGCCTTTGCAATACCTGCATCCCCAGCACTGGTCCTGGGCACTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp CTTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACACACAGGCTTGCTCTCTaGGCATTTTTCACAGTACCA +
Preference number: 4 (lower is better)
Translates to: LKQALGSLPQTGRVMLHTHRLAL*AFFTVP
Trigger: TGGTACTGTGAAAAATGCTCAGAGAGCAAGCCTGTG...TGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp AGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGCATCAAGCCACCCAAGGCTaGGGTCTTCCCACTCTGATC +
Preference number: 4 (lower is better)
Translates to: RKFLSLCPSNPRQFKCWHQATQG*GLPTLI
Trigger: GATCAGAGTGGGAAGACCTCAGCCTTGGGTGGCTTG...ATGCCAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTCAAGCCACCCAAGGCTaGGGTCTTCCCACTCTGATC +
Preference number: 4 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPQATQG*GLPTLI
Trigger: GATCAGAGTGGGAAGACCTCAGCCTTGGGTGGCTTG...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AAAGGCAAGCATGGAATAGGCACTCCTCATGCCTGTCTTTGTACAAAATATTGTCGTGCAGAAGCCACCTaGCCGAGTGCCACGGCGCCG +
Preference number: 4 (lower is better)
Translates to: KGKHGIGTPHACLCTKYCRAEAT*PSATAP
Trigger: CGGCGCCGTGGCACTCGGGCAGGTGGCTTCTGCACG...ACAATATTTTGTACAAAGACAGGCATGAGGAGTGCCTATTCCATGCTTGCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AAAGGCAAGCATGGAATAGGCACTCCTCATGCCTGTCTTTGTACAAAATATTGTCCAGCTCCTTGCCCTTaGCTGGGCCGCCCCTCCGGA +
Preference number: 4 (lower is better)
Translates to: KGKHGIGTPHACLCTKYCPAPCP*LGRPSG
Trigger: TCCGGAGGGGCGGCCCAGGCAAGGGCAAGGAGCTGG...ACAATATTTTGTACAAAGACAGGCATGAGGAGTGCCTATTCCATGCTTGCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AAAGGCAAGCATGGAATAGGCACTCCTCATGCCTGTCTTTGTACAAAATATTGTAGAGCGCCCCCGACCTaGACTGCCGCCAGGATGCCC +
Preference number: 4 (lower is better)
Translates to: KGKHGIGTPHACLCTKYCRAPPT*TAARMP
Trigger: GGGCATCCTGGCGGCAGTGCAGGTCGGGGGCGCTCT...ACAATATTTTGTACAAAGACAGGCATGAGGAGTGCCTATTCCATGCTTGCCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp GGGAATCTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAACAGGCCAAGATCAAATaGAAGGTGGAGAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GNLEFNLLTLLPALKASQQAKIK*KVERPR
Trigger: CCTGGGCCTCTCCACCTTGCATTTGATCTTGGCCTG...TTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAGATTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp CCCGAACGGCACTTAGGGATTTGGCACAAAAAGGACTCCTCTCCCTCCTTTTGCGCGCTGAGACACCTCTaGTGGATAGTGTGTGCAGAT +
Preference number: 4 (lower is better)
Translates to: PERHLGIWHKKDSSPSFCALRHL*WIVCAD
Trigger: ATCTGCACACACTATCCAGCAGAGGTGTCTCAGCGC...GCAAAAGGAGGGAGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGTTCGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp TGTCCCAGGACACTATCTGGGGAAGCCAGGAAATTCCTCAGCCTCTGTCCATCAGACCACACATCGAACTaGCATTTCCGCAAGCCAAGG +
Preference number: 4 (lower is better)
Translates to: CPRTLSGEARKFLSLCPSDHTSN*HFRKPR
Trigger: CCTTGGCTTGCGGAAATGGCAGTTCGATGTGTGGTC...TGATGGACAGAGGCTGAGGAATTTCCTGGCTTCCCCAGATAGTGTCCTGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp CCCGAACGGCACTTAGGGATTTGGCACAAAAAGGACTCCTCTCCCTCCTTTTGCGACCACACATCGAACTaGCATTTCCGCAAGCCAAGG +
Preference number: 4 (lower is better)
Translates to: PERHLGIWHKKDSSPSFCDHTSN*HFRKPR
Trigger: CCTTGGCTTGCGGAAATGGCAGTTCGATGTGTGGTC...GCAAAAGGAGGGAGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGTTCGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGTCCCCGTTCAGGTACTaGAGTGTTGCCCGAGTGATG +
Preference number: 4 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLSPFRY*SVARVM
Trigger: CATCACTCGGGCAACACTGCAGTACCTGAACGGGGA...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp TGTCCCAGGACACTATCTGGGGAAGCCAGGAAATTCCTCAGCCTCTGTCCATCATGCTGGAATCATCAATaGCCATCTGGCGGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: CPRTLSGEARKFLSLCPSCWNHQ*PSGGRP
Trigger: AGGCCTTCCGCCAGATGGGCATTGATGATTCCAGCA...TGATGGACAGAGGCTGAGGAATTTCCTGGCTTCCCCAGATAGTGTCCTGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGCATTCCGCAGCTGATCAATaGTGCGGGCATCGATGGCAC +
Preference number: 4 (lower is better)
Translates to: RKFLSLCPSNPRQFKCWHSAADQ*CGHRWH
Trigger: GTGCCATCGATGCCCGCAGCATTGATCAGCTGCGGA...ATGCCAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTACTGCGGGACAGACGTTaGAGGGCCTTAGGGAACAGA +
Preference number: 4 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLLRDRR*RALGNR
Trigger: TCTGTTCCCTAAGGCCCTGCAACGTCTGTCCCGCAG...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTAAGATGCCAACTGCGGTaGTATGTGCCCGTGAGCGGA +
Preference number: 4 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLRCQLR*YVPVSG
Trigger: TCCGCTCACGGGCACATAGCACCGCAGTTGGCATCT...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTAGATGCCAACTGCGGTaGTATGTGCCCGTGAGCGGA +
Preference number: 4 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPRCQLR*YVPVSG
Trigger: TCCGCTCACGGGCACATAGCACCGCAGTTGGCATCT...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTATTCAGCATCCGGGCTaGACAGCTCCGTATGGGGGT +
Preference number: 4 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPIQHPG*TAPYGG
Trigger: ACCCCCATACGGAGCTGTGCAGCCCGGATGCTGAAT...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307885.4
ENST00000357869.8
CDS-3UTR GCA 90 bp AACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGGGGAGCTATTGGGCAGAATGTTATaGAGCAGCCTCCGGTTGTAT +
Preference number: 4 (lower is better)
Translates to: NLLTLLPALKASQGTGELLGRML*SSLRLY
Trigger: ATACAACCGGAGGCTGCTGCATAACATTCTGCCCAA...TAGCTCCCCAGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp CTTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACAGACACCCTCATTGTTTaGCTCCAGCTCCACATAGAA +
Preference number: 4 (lower is better)
Translates to: LKQALGSLPQTGRVMLHTDTLIV*LQLHIE
Trigger: TTCTATGTGGAGCTGGAGGCAAACAATGAGGGTGTC...TGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AAGTTTAAGGTTCCTCTTCCCCACCCCGTAGTACCAGTATCCAGGTCCTCAGAGTTGATCTTTTCCAGCTaGCGGAACCGCTCCTCGCTG +
Preference number: 4 (lower is better)
Translates to: KFKVPLPHPVVPVSRSSELIFSS*RNRSSL
Trigger: CAGCGAGGAGCGGTTCCGGCAGCTGGAAAAGATCAA...CTCTGAGGACCTGGATACTGGTACTACGGGGTGGGGAAGAGGAACCTTAAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp CTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTTTGATGTGCTTCATCTaGTCCATGAGCCGCATGGCG +
Preference number: 4 (lower is better)
Translates to: LEFNLLTLLPALKASQGTLMCFI*SMSRMA
Trigger: CGCCATGCGGCTCATGGAGCAGATGAAGCACATCAA...AGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp TGTCCCAGGACACTATCTGGGGAAGCCAGGAAATTCCTCAGCCTCTGTCCATCACAGAAGAGGAAGAGATaGTCCATGCCCCCTTGTCAG +
Preference number: 4 (lower is better)
Translates to: CPRTLSGEARKFLSLCPSQKRKR*SMPPCQ
Trigger: CTGACAAGGGGGCATGGAGCATCTCTTCCTCTTCTG...TGATGGACAGAGGCTGAGGAATTTCCTGGCTTCCCCAGATAGTGTCCTGGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp GGGAATCTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAACCCATCCCACTCCTGTaGAACCTGGGCATCTCTCTA +
Preference number: 4 (lower is better)
Translates to: GNLEFNLLTLLPALKASQPIPLL*NLGISL
Trigger: TAGAGAGATGCCCAGGTTGCACAGGAGTGGGATGGG...TTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAGATTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTAGACAGGGAGAGTCATaGTGCACACATGGCCCCCGA +
Preference number: 4 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPRQGES*CTHGPR
Trigger: TCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCT...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AAGTTTAAGGTTCCTCTTCCCCACCCCGTAGTACCAGTATCCAGGTCCTCAGAGCTCAGAGGGATTCCATaGTACCCCAGCCCCAAAGCA +
Preference number: 4 (lower is better)
Translates to: KFKVPLPHPVVPVSRSSELRGIP*YPSPKA
Trigger: TGCTTTGGGGCTGGGGTAGCATGGAATCCCTCTGAG...CTCTGAGGACCTGGATACTGGTACTACGGGGTGGGGAAGAGGAACCTTAAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AAAGGCAAGCATGGAATAGGCACTCCTCATGCCTGTCTTTGTACAAAATATTGTCCGCAGGGGTGGGGCTaGGTGGCTCTGCATCCCGGA +
Preference number: 4 (lower is better)
Translates to: KGKHGIGTPHACLCTKYCPQGWG*VALHPG
Trigger: TCCGGGATGCAGAGCCACCCAGCCCCACCCCTGCGG...ACAATATTTTGTACAAAGACAGGCATGAGGAGTGCCTATTCCATGCTTGCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTCGGAACTGCTTCGACTaGAACACCTGCACCAGACGG +
Preference number: 4 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPRNCFD*NTCTRR
Trigger: CCGTCTGGTGCAGGTGTTCCAGTCGAAGCAGTTCCG...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGAGCTCACCACCCACATaGAGTCCTGGCGGAAGCTAT +
Preference number: 4 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLSSPPT*SPGGSY
Trigger: ATAGCTTCCGCCAGGACTCCATGTGGGTGGTGAGCT...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AAGTTTAAGGTTCCTCTTCCCCACCCCGTAGTACCAGTATCCAGGTCCTCAGAGAGCTCACCACCCACATaGAGTCCTGGCGGAAGCTAT +
Preference number: 4 (lower is better)
Translates to: KFKVPLPHPVVPVSRSSESSPPT*SPGGSY
Trigger: ATAGCTTCCGCCAGGACTCCATGTGGGTGGTGAGCT...CTCTGAGGACCTGGATACTGGTACTACGGGGTGGGGAAGAGGAACCTTAAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp GGGAATCTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGAACAGCAGCACATTaGCACCGAGCTGCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: GNLEFNLLTLLPALKASQGTAAH*HRAASR
Trigger: TCTGGAAGCAGCTCGGTGCCAATGTGCTGCTGTTCC...TTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAGATTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGCATTCCATGGCAACGTGCTaGGGCAATACCGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: RKFLSLCPSNPRQFKCWHSMATC*GNTDSS
Trigger: GCTGCTGTCGGTATTGCCCCAGCACGTTGCCATGGA...ATGCCAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp CTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTCACGTACCAGCGAGATaGCCTCAATCATGTCTACCC +
Preference number: 4 (lower is better)
Translates to: LEFNLLTLLPALKASQGTHVPAR*PQSCLP
Trigger: GGGTAGACATGATTGAGGCCATCTCGCTGGTACGTG...AGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTAAGGCCTTGGAGTCCTTaGTCCGGGAGAAGGCACGAT +
Preference number: 4 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLRPWSP*SGRRHD
Trigger: ATCGTGCCTTCTCCCGGACCAAGGACTCCAAGGCCT...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGTCATCAATGCCCATCTaGCGGAAGGCCTTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLSSMPI*RKALES
Trigger: GGACTCCAAGGCCTTCCGCCAGATGGGCATTGATGA...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTAGGGTTCAGGGCATCTTaGGTGCCCCGGTTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLGFRAS*VPRLSL
Trigger: CAAAGACAACCGGGGCACCCAAGATGCCCTGAACCC...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTATGCTGCGGGCATCGATaGCACGGCTCAGGAACTCAT +
Preference number: 4 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLCCGHR*HGSGTH
Trigger: ATGAGTTCCTGAGCCGTGCCATCGATGCCCGCAGCA...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGGGGAGCTAGGGAAGATGAGAAGCTaGATGAAGCAGATGAAGCAG +
Preference number: 4 (lower is better)
Translates to: NLLTLLPALKASQGTGELGKMRS*MKQMKQ
Trigger: CTGCTTCATCTGCTTCATCCAGCTTCTCATCTTCCC...TAGCTCCCCAGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp CTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTAGTTGTCAAAGATGGTaGCTGGGGGACCCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: LEFNLLTLLPALKASQGTSCQRW*LGDPAE
Trigger: TTCTGCTGGGTCCCCCAGCCACCATCTTTGACAACT...AGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTCACCCTCCCTGCAGCTaGACAGTCCAGCCCATCAAA +
Preference number: 4 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPHPPCS*TVQPIK
Trigger: TTTGATGGGCTGGACTGTCCAGCTGCAGGGAGGGTG...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGCATCACCCTCCCTGCAGCTaGACAGTCCAGCCCATCAAA +
Preference number: 4 (lower is better)
Translates to: RKFLSLCPSNPRQFKCWHHPPCS*TVQPIK
Trigger: TTTGATGGGCTGGACTGTCCAGCTGCAGGGAGGGTG...ATGCCAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGCATGACACCTGCCACGACTaGGCCCATGTTCAGCCCAAT +
Preference number: 4 (lower is better)
Translates to: RKFLSLCPSNPRQFKCWHDTCHD*AHVQPN
Trigger: ATTGGGCTGAACATGGGCCCAGTCGTGGCAGGTGTC...ATGCCAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp GGGAATCTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAATTGGCAGCTAGAACCTaGTACAGGTCCGTGGTCACC +
Preference number: 4 (lower is better)
Translates to: GNLEFNLLTLLPALKASQLAART*YRSVVT
Trigger: GGTGACCACGGACCTGTACCAGGTTCTAGCTGCCAA...TTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAGATTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp TGTCCCAGGACACTATCTGGGGAAGCCAGGAAATTCCTCAGCCTCTGTCCATCAGGATGTTCCCTTTTGTaGTTAGCAGGGTCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: CPRTLSGEARKFLSLCPSGCSLL*LAGSGG
Trigger: GCCTCCAGACCCTGCTAACCACAAAAGGGAACATCC...TGATGGACAGAGGCTGAGGAATTTCCTGGCTTCCCCAGATAGTGTCCTGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGGGGAGCTATTGCAAAGGCAAGCATaGAATAGGCACTCCTCATGC +
Preference number: 4 (lower is better)
Translates to: NLLTLLPALKASQGTGELLQRQA*NRHSSC
Trigger: GCATGAGGAGTGCCTATTCCATGCTTGCCTTTGCAA...TAGCTCCCCAGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp GGGAATCTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGCCCAGGACCAGTGCTaGGGATGCAGGTATTGCAAA +
Preference number: 4 (lower is better)
Translates to: GNLEFNLLTLLPALKASQAQDQC*GCRYCK
Trigger: TTTGCAATACCTGCATCCCCAGCACTGGTCCTGGGC...TTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAGATTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp GGGAATCTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAACCAACACCAGAGACTTaGGAGGGCAGGTTTGGGATC +
Preference number: 4 (lower is better)
Translates to: GNLEFNLLTLLPALKASQPTPET*EGRFGI
Trigger: GATCCCAAACCTGCCCTCCCAAGTCTCTGGTGTTGG...TTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAGATTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGGGGAGCTACGGCACTTAGGGATTTaGCACAAAAAGGACTCCTCT +
Preference number: 4 (lower is better)
Translates to: NLLTLLPALKASQGTGELRHLGI*HKKDSS
Trigger: AGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCG...TAGCTCCCCAGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTAACAGGCCCTCCCACCTaGCAAGAAGCAGAGACAAGC +
Preference number: 4 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLTGPPT*QEAETS
Trigger: GCTTGTCTCTGCTTCTTGCCAGGTGGGAGGGCCTGT...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp AGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGCATTTGATCCTCAGGCAGTaGTTCTCCGCAGCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: RKFLSLCPSNPRQFKCWHLILRQ*FSAASL
Trigger: CAAGCTGGCTGCGGAGAATCACTGCCTGAGGATCAA...ATGCCAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp AAGTTTAAGGTTCCTCTTCCCCACCCCGTAGTACCAGTATCCAGGTCCTCAGAGGCAGCATGTTCCCGATaGAGTACTCAGGAAAGCTGC +
Preference number: 4 (lower is better)
Translates to: KFKVPLPHPVVPVSRSSEAACSR*STQESC
Trigger: GCAGCTTTCCTGAGTACTTCATCGGGAACATGCTGC...CTCTGAGGACCTGGATACTGGTACTACGGGGTGGGGAAGAGGAACCTTAAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307885.4
ENST00000357869.8
CDS-3UTR TCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGCCTTGTTTTCCAGCTTaGGGGCAGACGAGCATGATC +
Preference number: 4 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLPCFPA*GQTSMI
Trigger: GATCATGCTCGTCTGCCCTCAAGCTGGAAAACAAGG...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTTTGGCCGAACGGAACTaGTTCGACTGGAACACCTGC +
Preference number: 4 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPLAERN*FDWNTC
Trigger: GCAGGTGTTCCAGTCGAAGCAGTTCCGTTCGGCCAA...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AAGTTTAAGGTTCCTCTTCCCCACCCCGTAGTACCAGTATCCAGGTCCTCAGAGTCAGCAGCGTCAGGCTaGTCTGGTTCATCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: KFKVPLPHPVVPVSRSSESAASG*SGSSGR
Trigger: TCTTCCAGATGAACCAGAGCAGCCTGACGCTGCTGA...CTCTGAGGACCTGGATACTGGTACTACGGGGTGGGGAAGAGGAACCTTAAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGTCAGCAGCGTCAGGCTaGTCTGGTTCATCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLSAASG*SGSSGR
Trigger: TCTTCCAGATGAACCAGAGCAGCCTGACGCTGCTGA...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AAGTTTAAGGTTCCTCTTCCCCACCCCGTAGTACCAGTATCCAGGTCCTCAGAGGCGCTGAGACACCTCTaGTGGATAGTGTGTGCAGAT +
Preference number: 4 (lower is better)
Translates to: KFKVPLPHPVVPVSRSSEALRHL*WIVCAD
Trigger: ATCTGCACACACTATCCAGCAGAGGTGTCTCAGCGC...CTCTGAGGACCTGGATACTGGTACTACGGGGTGGGGAAGAGGAACCTTAAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTAATCTCCATGGCAACGTaGTGGGGCAATACCGACAGC +
Preference number: 4 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLISMAT*WGNTDS
Trigger: GCTGTCGGTATTGCCCCAGCACGTTGCCATGGAGAT...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AAGTTTAAGGTTCCTCTTCCCCACCCCGTAGTACCAGTATCCAGGTCCTCAGAGTGCTGGAATCATCAATaGCCATCTGGCGGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: KFKVPLPHPVVPVSRSSECWNHQ*PSGGRP
Trigger: AGGCCTTCCGCCAGATGGGCATTGATGATTCCAGCA...CTCTGAGGACCTGGATACTGGTACTACGGGGTGGGGAAGAGGAACCTTAAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp CCCGAACGGCACTTAGGGATTTGGCACAAAAAGGACTCCTCTCCCTCCTTTTGCTGCCCCGGTTGTCTTTaGTGGAATCATCAATGCCCA +
Preference number: 4 (lower is better)
Translates to: PERHLGIWHKKDSSPSFCCPGCL*WNHQCP
Trigger: TGGGCATTGATGATTCCAGCAAAGACAACCGGGGCA...GCAAAAGGAGGGAGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGTTCGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGCAGGACGGAAAAGATaGCAACTGCGGTGCTATGTG +
Preference number: 4 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLAGRKR*QLRCYV
Trigger: CACATAGCACCGCAGTTGGCATCTTTTCCGTCCTGC...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTTTGATCTTTTCCAGCTaGCGGAACCGCTCCTCGCTG +
Preference number: 4 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPLIFSS*RNRSSL
Trigger: CAGCGAGGAGCGGTTCCGGCAGCTGGAAAAGATCAA...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGTTGATGTGCTTCATCTaGTCCATGAGCCGCATGGCG +
Preference number: 4 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLLMCFI*SMSRMA
Trigger: CGCCATGCGGCTCATGGAGCAGATGAAGCACATCAA...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTGGAAGAGATGCTCCATaGCCCCTTGTCAGCAGACAG +
Preference number: 4 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPGRDAP*PLVSRQ
Trigger: CTGTCTGCTGACAAGGGGGCATGGAGCATCTCTTCC...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AAGTTTAAGGTTCCTCTTCCCCACCCCGTAGTACCAGTATCCAGGTCCTCAGAGCAGAAGAGGAAGAGATaGTCCATGCCCCCTTGTCAG +
Preference number: 4 (lower is better)
Translates to: KFKVPLPHPVVPVSRSSEQKRKR*SMPPCQ
Trigger: CTGACAAGGGGGCATGGAGCATCTCTTCCTCTTCTG...CTCTGAGGACCTGGATACTGGTACTACGGGGTGGGGAAGAGGAACCTTAAACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGGGGAGCTAGAAACCCTTCTCCTCTaGCTCTCTAGTCATTTCCAA +
Preference number: 4 (lower is better)
Translates to: NLLTLLPALKASQGTGELETLLL*LSSHFQ
Trigger: TTGGAAATGACTAGAGAGGCAGAGGAGAAGGGTTTC...TAGCTCCCCAGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGCACTTTGGAAGGCCCTaGCAGGTAGATCACAAGGTC +
Preference number: 4 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLHFGRP*QVDHKV
Trigger: GACCTTGTGATCTACCTGCCAGGGCCTTCCAAAGTG...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307885.4
CDS-3UTR CCA 90 bp TGTCCCAGGACACTATCTGGGGAAGCCAGGAAATTCCTCAGCCTCTGTCCATCAGCCGAGATAGGAGGATaGCTTAAGGCTAGGAATGTG +
Preference number: 4 (lower is better)
Translates to: CPRTLSGEARKFLSLCPSAEIGG*LKARNV
Trigger: CACATTCCTAGCCTTAAGCCATCCTCCTATCTCGGC...TGATGGACAGAGGCTGAGGAATTTCCTGGCTTCCCCAGATAGTGTCCTGGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307885.4
CDS-3UTR CCA 90 bp TGTCCCAGGACACTATCTGGGGAAGCCAGGAAATTCCTCAGCCTCTGTCCATCAAGCGTCAGGCTGCTCTaGTTCATCTGGAAGAAGTAC +
Preference number: 4 (lower is better)
Translates to: CPRTLSGEARKFLSLCPSSVRLL*FIWKKY
Trigger: GTACTTCTTCCAGATGAACCAGAGCAGCCTGACGCT...TGATGGACAGAGGCTGAGGAATTTCCTGGCTTCCCCAGATAGTGTCCTGGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTAGCTCACCACCCACATaGAGTCCTGGCGGAAGCTAT +
Preference number: 4 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPSSPPT*SPGGSY
Trigger: ATAGCTTCCGCCAGGACTCCATGTGGGTGGTGAGCT...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AAGTTTAAGGTTCCTCTTCCCCACCCCGTAGTACCAGTATCCAGGTCCTCAGAGCACGTACCAGCGAGATaGCCTCAATCATGTCTACCC +
Preference number: 4 (lower is better)
Translates to: KFKVPLPHPVVPVSRSSEHVPAR*PQSCLP
Trigger: GGGTAGACATGATTGAGGCCATCTCGCTGGTACGTG...CTCTGAGGACCTGGATACTGGTACTACGGGGTGGGGAAGAGGAACCTTAAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp CCCGAACGGCACTTAGGGATTTGGCACAAAAAGGACTCCTCTCCCTCCTTTTGCTCAAGATCCTCTCTCTaGAAGGTGAGCAGAAACCGG +
Preference number: 4 (lower is better)
Translates to: PERHLGIWHKKDSSPSFCSRSSL*KVSRNR
Trigger: CCGGTTTCTGCTCACCTTCCAGAGAGAGGATCTTGA...GCAAAAGGAGGGAGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGTTCGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp TGTCCCAGGACACTATCTGGGGAAGCCAGGAAATTCCTCAGCCTCTGTCCATCATCAAGATCCTCTCTCTaGAAGGTGAGCAGAAACCGG +
Preference number: 4 (lower is better)
Translates to: CPRTLSGEARKFLSLCPSSRSSL*KVSRNR
Trigger: CCGGTTTCTGCTCACCTTCCAGAGAGAGGATCTTGA...TGATGGACAGAGGCTGAGGAATTTCCTGGCTTCCCCAGATAGTGTCCTGGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTTTGGCAGCTAGAACCTaGTACAGGTCCGTGGTCACC +
Preference number: 4 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPLAART*YRSVVT
Trigger: GGTGACCACGGACCTGTACCAGGTTCTAGCTGCCAA...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTACCAGCTGGTAGCCCTTaGCAGCTAGAACCTGGTACA +
Preference number: 4 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLPAGSP*QLEPGT
Trigger: TGTACCAGGTTCTAGCTGCCAAGGGCTACCAGCTGG...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGCATCCAGCTGGTAGCCCTTaGCAGCTAGAACCTGGTACA +
Preference number: 4 (lower is better)
Translates to: RKFLSLCPSNPRQFKCWHPAGSP*QLEPGT
Trigger: TGTACCAGGTTCTAGCTGCCAAGGGCTACCAGCTGG...ATGCCAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGCCAAGCACAGCCTGCTaGGATGTTCCCTTTTGTGGT +
Preference number: 4 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLPSTAC*DVPFCG
Trigger: ACCACAAAAGGGAACATCCCAGCAGGCTGTGCTTGG...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTAGCCCAGGACCAGTGCTaGGGATGCAGGTATTGCAAA +
Preference number: 4 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLAQDQC*GCRYCK
Trigger: TTTGCAATACCTGCATCCCCAGCACTGGTCCTGGGC...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTCACTCCTGTGCAACCTaGGCATCTCTCTACATCCCC +
Preference number: 4 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPHSCAT*ASLYIP
Trigger: GGGGATGTAGAGAGATGCCCAGGTTGCACAGGAGTG...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp TGTCCCAGGACACTATCTGGGGAAGCCAGGAAATTCCTCAGCCTCTGTCCATCAGACTCCTCTACCAACTaGGTGAGGAAAGGGACAATG +
Preference number: 4 (lower is better)
Translates to: CPRTLSGEARKFLSLCPSDSSTN*VRKGTM
Trigger: CATTGTCCCTTTCCTCACCCAGTTGGTAGAGGAGTC...TGATGGACAGAGGCTGAGGAATTTCCTGGCTTCCCCAGATAGTGTCCTGGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp CTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTTTAAGGCTAGGAATGTaGGAGCAACCTGGGCAATAC +
Preference number: 4 (lower is better)
Translates to: LEFNLLTLLPALKASQGTLRLGM*EQPGQY
Trigger: GTATTGCCCAGGTTGCTCTCACATTCCTAGCCTTAA...AGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307885.4
CDS-3UTR TCA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTAGTGTGCAGATGCCAATaGCGTTGGTGCAGAGGAACA +
Preference number: 4 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLVCRCQ*RWCRGT
Trigger: TGTTCCTCTGCACCAACGTCATTGGCATCTGCACAC...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGAGTCCCCCAAGATCTTaGTCCTCAGGCAGTGATTCT +
Preference number: 4 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLSPPRS*SSGSDS
Trigger: AGAATCACTGCCTGAGGATCAAGATCTTGGGGGACT...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp AAGTTTAAGGTTCCTCTTCCCCACCCCGTAGTACCAGTATCCAGGTCCTCAGAGAGTCCCCCAAGATCTTaGTCCTCAGGCAGTGATTCT +
Preference number: 4 (lower is better)
Translates to: KFKVPLPHPVVPVSRSSESPPRS*SSGSDS
Trigger: AGAATCACTGCCTGAGGATCAAGATCTTGGGGGACT...CTCTGAGGACCTGGATACTGGTACTACGGGGTGGGGAAGAGGAACCTTAAACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp AGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGCATCACAGATCAGCACGGTaGTTAGCAGCAGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: RKFLSLCPSNPRQFKCWHHRSAR*LAAAGR
Trigger: TCTTCCTGCTGCTGCTAATCACCGTGCTGATCTGTG...ATGCCAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp CCCGAACGGCACTTAGGGATTTGGCACAAAAAGGACTCCTCTCCCTCCTTTTGCGCAGCACCAAATAGATaGGCCCCAAGACAAAGATCA +
Preference number: 4 (lower is better)
Translates to: PERHLGIWHKKDSSPSFCAAPNR*APRQRS
Trigger: TGATCTTTGTCTTGGGGCTCATCTATTTGGTGCTGC...GCAAAAGGAGGGAGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGTTCGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp CCCGAACGGCACTTAGGGATTTGGCACAAAAAGGACTCCTCTCCCTCCTTTTGCCCTTTCTCCATGCCCTaGCCCTTTTCTATTTGGCAA +
Preference number: 4 (lower is better)
Translates to: PERHLGIWHKKDSSPSFCPFSMP*PFSIWQ
Trigger: TTGCCAAATAGAAAAGGGTCAGGGCATGGAGAAAGG...GCAAAAGGAGGGAGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGTTCGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp TGTCCCAGGACACTATCTGGGGAAGCCAGGAAATTCCTCAGCCTCTGTCCATCATCTCTCTACATCCCCTaGAGTAGGAAACCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: CPRTLSGEARKFLSLCPSSLYIP*SRKPCF
Trigger: AAAGCAGGGTTTCCTACTTCAGGGGATGTAGAGAGA...TGATGGACAGAGGCTGAGGAATTTCCTGGCTTCCCCAGATAGTGTCCTGGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGCATTTGGTTGATGCATaGAGATGCCCAAGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLHLVDA*RCPREA
Trigger: TGCCTCCCTTGGGCATCTTCATGCATCAACCAAATG...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGATGGCCCATTTGGTTaGTGCATGAAGATGCCCAAG +
Preference number: 4 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLDGPFG*CMKMPK
Trigger: CTTGGGCATCTTCATGCATCAACCAAATGGGCCATC...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp AAGTTTAAGGTTCCTCTTCCCCACCCCGTAGTACCAGTATCCAGGTCCTCAGAGGATGGCCCATTTGGTTaGTGCATGAAGATGCCCAAG +
Preference number: 4 (lower is better)
Translates to: KFKVPLPHPVVPVSRSSEDGPFG*CMKMPK
Trigger: CTTGGGCATCTTCATGCATCAACCAAATGGGCCATC...CTCTGAGGACCTGGATACTGGTACTACGGGGTGGGGAAGAGGAACCTTAAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTAAACGCTTCTGCCCATTaGGTTCACCCCAGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLNASAH*VHPRLF
Trigger: AAACAGCCTGGGGTGAACGCAATGGGCAGAAGCGTT...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGCATAACGCTTCTGCCCATTaGGTTCACCCCAGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: RKFLSLCPSNPRQFKCWHNASAH*VHPRLF
Trigger: AAACAGCCTGGGGTGAACGCAATGGGCAGAAGCGTT...ATGCCAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp CCCGAACGGCACTTAGGGATTTGGCACAAAAAGGACTCCTCTCCCTCCTTTTGCTCACCACGGTTAAGTTaGCAGGCCAAGATCAAATGC +
Preference number: 4 (lower is better)
Translates to: PERHLGIWHKKDSSPSFCSPRLS*QAKIKC
Trigger: GCATTTGATCTTGGCCTGGCAACTTAACCGTGGTGA...GCAAAAGGAGGGAGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGTTCGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTACATTGGCACCGAGCTaGTTCCAGAGGAAGGCATCA +
Preference number: 4 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPTLAPS*FQRKAS
Trigger: TGATGCCTTCCTCTGGAAGCAGCTCGGTGCCAATGT...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp CTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTAAAGTCTCAATGTGCTaGTCCTTGAGGTACGCGTTG +
Preference number: 4 (lower is better)
Translates to: LEFNLLTLLPALKASQGTKVSMC*SLRYAL
Trigger: CAACGCGTACCTCAAGGAGCAGCACATTGAGACTTT...AGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AAAGGCAAGCATGGAATAGGCACTCCTCATGCCTGTCTTTGTACAAAATATTGTTTGGCCCGAGTCCGCTaGAGCTTGGCCAGCATGGCC +
Preference number: 4 (lower is better)
Translates to: KGKHGIGTPHACLCTKYCLARVR*SLASMA
Trigger: GGCCATGCTGGCCAAGCTGCAGCGGACTCGGGCCAA...ACAATATTTTGTACAAAGACAGGCATGAGGAGTGCCTATTCCATGCTTGCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGCATTGCTGGAATCATCAATaGCCATCTGGCGGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: RKFLSLCPSNPRQFKCWHCWNHQ*PSGGRP
Trigger: AGGCCTTCCGCCAGATGGGCATTGATGATTCCAGCA...ATGCCAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGCATGCAGCAGCAGGAAGATaGTGGCATAGATCCCAAGCA +
Preference number: 4 (lower is better)
Translates to: RKFLSLCPSNPRQFKCWHAAAGR*WHRSQA
Trigger: TGCTTGGGATCTATGCCAGCATCTTCCTGCTGCTGC...ATGCCAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTACAGAGTCCACTCAATaGCCACCTTGGTCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPTESTQ*PPWSLQ
Trigger: CTGAAGGGACCAAGGTGGGCATTGAGTGGACTCTGT...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AAAGGCAAGCATGGAATAGGCACTCCTCATGCCTGTCTTTGTACAAAATATTGTGGTCTGGAGGCTCAGTaGCCCCTGCCACAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: KGKHGIGTPHACLCTKYCGLEAQ*PLPQLH
Trigger: GTGGAGCTGTGGCAGGGGGCACTGAGCCTCCAGACC...ACAATATTTTGTACAAAGACAGGCATGAGGAGTGCCTATTCCATGCTTGCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTGACCAGTGCTGGGGATaGAGGTATTGCAAAGGCAAG +
Preference number: 4 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPDQCWG*RYCKGK
Trigger: CTTGCCTTTGCAATACCTGCATCCCCAGCACTGGTC...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGATTAGCCTGGTGTGGTaGTATGCACCTATAGACCGG +
Preference number: 4 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLISLVW*YAPIDR
Trigger: CCGGTCTATAGGTGCATACCACCACACCAGGCTAAT...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307885.4
CDS-3UTR CCA 90 bp AAAGGCAAGCATGGAATAGGCACTCCTCATGCCTGTCTTTGTACAAAATATTGTTGCACGCGCCCGCTGTaGATGCCCACGCGCATGTTC +
Preference number: 4 (lower is better)
Translates to: KGKHGIGTPHACLCTKYCCTRPL*MPTRMF
Trigger: GAACATGCGCGTGGGCATCCACAGCGGGCGCGTGCA...ACAATATTTTGTACAAAGACAGGCATGAGGAGTGCCTATTCCATGCTTGCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGCATCAGGGTGGAGTGTaGGAAGATGAGAAGCTGGAT +
Preference number: 4 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLHQGGV*EDEKLD
Trigger: ATCCAGCTTCTCATCTTCCCACACTCCACCCTGATG...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AAGTTTAAGGTTCCTCTTCCCCACCCCGTAGTACCAGTATCCAGGTCCTCAGAGCCAAGACAAAGATCATaGCCAACTTCCCGATGCTGC +
Preference number: 4 (lower is better)
Translates to: KFKVPLPHPVVPVSRSSEPRQRS*PTSRCC
Trigger: GCAGCATCGGGAAGTTGGCCATGATCTTTGTCTTGG...CTCTGAGGACCTGGATACTGGTACTACGGGGTGGGGAAGAGGAACCTTAAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp GGGAATCTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAACTTCAGCTGAATTTGTaGCTGGGCCCTGTTAACTGC +
Preference number: 4 (lower is better)
Translates to: GNLEFNLLTLLPALKASQLQLNL*LGPVNC
Trigger: GCAGTTAACAGGGCCCAGCCACAAATTCAGCTGAAG...TTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAGATTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTCCAAGCACAGCCTGCTaGGATGTTCCCTTTTGTGGT +
Preference number: 4 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPPSTAC*DVPFCG
Trigger: ACCACAAAAGGGAACATCCCAGCAGGCTGTGCTTGG...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTACAAAGGCTGGAAGATTaGAGAGGGAACAGCCCTACC +
Preference number: 4 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLQRLED*RGNSPT
Trigger: GGTAGGGCTGTTCCCTCTCCAATCTTCCAGCCTTTG...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp CCCGAACGGCACTTAGGGATTTGGCACAAAAAGGACTCCTCTCCCTCCTTTTGCTTGCAAAGGCAAGCATaGAATAGGCACTCCTCATGC +
Preference number: 4 (lower is better)
Translates to: PERHLGIWHKKDSSPSFCLQRQA*NRHSSC
Trigger: GCATGAGGAGTGCCTATTCCATGCTTGCCTTTGCAA...GCAAAAGGAGGGAGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGTTCGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGCATTCTCCTGAAATATaGCCAAAGCTGGCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLHSPEI*PKLAPQ
Trigger: CTGGGGAGCCAGCTTTGGCCATATTTCAGGAGAATG...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp CTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTCGGCACTTAGGGATTTaGCACAAAAAGGACTCCTCT +
Preference number: 4 (lower is better)
Translates to: LEFNLLTLLPALKASQGTRHLGI*HKKDSS
Trigger: AGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCG...AGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGACTCAGGCTGAAGGCTaGGGAAAGCCAAGTTTAAGG +
Preference number: 4 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLTQAEG*GKPSLR
Trigger: CCTTAAACTTGGCTTTCCCCAGCCTTCAGCCTGAGT...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AAGTTTAAGGTTCCTCTTCCCCACCCCGTAGTACCAGTATCCAGGTCCTCAGAGACTCAGGCTGAAGGCTaGGGAAAGCCAAGTTTAAGG +
Preference number: 4 (lower is better)
Translates to: KFKVPLPHPVVPVSRSSETQAEG*GKPSLR
Trigger: CCTTAAACTTGGCTTTCCCCAGCCTTCAGCCTGAGT...CTCTGAGGACCTGGATACTGGTACTACGGGGTGGGGAAGAGGAACCTTAAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AAGTTTAAGGTTCCTCTTCCCCACCCCGTAGTACCAGTATCCAGGTCCTCAGAGGGCTTCACAAGGGACTaGGGAGCTAGAAACATGCTA +
Preference number: 4 (lower is better)
Translates to: KFKVPLPHPVVPVSRSSEGFTRD*GARNML
Trigger: TAGCATGTTTCTAGCTCCCCAGTCCCTTGTGAAGCC...CTCTGAGGACCTGGATACTGGTACTACGGGGTGGGGAAGAGGAACCTTAAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp AAGTTTAAGGTTCCTCTTCCCCACCCCGTAGTACCAGTATCCAGGTCCTCAGAGCCTTTCTCCATGCCCTaGCCCTTTTCTATTTGGCAA +
Preference number: 4 (lower is better)
Translates to: KFKVPLPHPVVPVSRSSEPFSMP*PFSIWQ
Trigger: TTGCCAAATAGAAAAGGGTCAGGGCATGGAGAAAGG...CTCTGAGGACCTGGATACTGGTACTACGGGGTGGGGAAGAGGAACCTTAAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp AAAGGCAAGCATGGAATAGGCACTCCTCATGCCTGTCTTTGTACAAAATATTGTCCTGGGGTGGAGAGCTaGGGAGCAGGAGCACAAGGA +
Preference number: 4 (lower is better)
Translates to: KGKHGIGTPHACLCTKYCPGVES*GAGAQG
Trigger: TCCTTGTGCTCCTGCTCCTCAGCTCTCCACCCCAGG...ACAATATTTTGTACAAAGACAGGCATGAGGAGTGCCTATTCCATGCTTGCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp CCCGAACGGCACTTAGGGATTTGGCACAAAAAGGACTCCTCTCCCTCCTTTTGCTACAGACAGAGAAACTaGGGCACCAACAAATTCAGG +
Preference number: 4 (lower is better)
Translates to: PERHLGIWHKKDSSPSFCYRQRN*GTNKFR
Trigger: CCTGAATTTGTTGGTGCCTCAGTTTCTCTGTCTGTA...GCAAAAGGAGGGAGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGTTCGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTACATTTGGTTGATGCATaGAGATGCCCAAGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLHLVDA*RCPREA
Trigger: TGCCTCCCTTGGGCATCTTCATGCATCAACCAAATG...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTAGAGGTCTTCCCACTCTaGTCTACTTATACCCTCACC +
Preference number: 4 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLEVFPL*STYTLT
Trigger: GGTGAGGGTATAAGTAGATCAGAGTGGGAAGACCTC...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTGAGGTCTTCCCACTCTaGTCTACTTATACCCTCACC +
Preference number: 4 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPEVFPL*STYTLT
Trigger: GGTGAGGGTATAAGTAGATCAGAGTGGGAAGACCTC...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGTCACCACGGTTAAGTTaGCAGGCCAAGATCAAATGC +
Preference number: 4 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLSPRLS*QAKIKC
Trigger: GCATTTGATCTTGGCCTGGCAACTTAACCGTGGTGA...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp GGGAATCTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAATCACCACGGTTAAGTTaGCAGGCCAAGATCAAATGC +
Preference number: 4 (lower is better)
Translates to: GNLEFNLLTLLPALKASQSPRLS*QAKIKC
Trigger: GCATTTGATCTTGGCCTGGCAACTTAACCGTGGTGA...TTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAGATTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGAAAGTCTCAATGTGCTaGTCCTTGAGGTACGCGTTG +
Preference number: 4 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLKVSMC*SLRYAL
Trigger: CAACGCGTACCTCAAGGAGCAGCACATTGAGACTTT...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTAGCGTCAGGCTGCTCTaGTTCATCTGGAAGAAGTAC +
Preference number: 4 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPSVRLL*FIWKKY
Trigger: GTACTTCTTCCAGATGAACCAGAGCAGCCTGACGCT...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGCCCGGTTGTCTTTGCTaGAATCATCAATGCCCATCT +
Preference number: 4 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLPGCLC*NHQCPS
Trigger: AGATGGGCATTGATGATTCCAGCAAAGACAACCGGG...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGCATCTCCGTATGGGGGTGTaGTTACAGGTGAACATGTTG +
Preference number: 4 (lower is better)
Translates to: RKFLSLCPSNPRQFKCWHLRMGV*LQVNML
Trigger: CAACATGTTCACCTGTAACCACACCCCCATACGGAG...ATGCCAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307885.4
ENST00000357869.8
CDS-3UTR CCA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTCTCCGTATGGGGGTGTaGTTACAGGTGAACATGTTG +
Preference number: 4 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPLRMGV*LQVNML
Trigger: CAACATGTTCACCTGTAACCACACCCCCATACGGAG...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307885.4
ENST00000357869.8
CDS-3UTR CCA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTACCAAGACAAAGATCATaGCCAACTTCCCGATGCTGC +
Preference number: 4 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLPRQRS*PTSRCC
Trigger: GCAGCATCGGGAAGTTGGCCATGATCTTTGTCTTGG...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp CCCGAACGGCACTTAGGGATTTGGCACAAAAAGGACTCCTCTCCCTCCTTTTGCCATCAAAGGTCTCATTaGAAGAAGCCAAGCCATGGA +
Preference number: 4 (lower is better)
Translates to: PERHLGIWHKKDSSPSFCHQRSH*KKPSHG
Trigger: TCCATGGCTTGGCTTCTTCCAATGAGACCTTTGATG...GCAAAAGGAGGGAGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGTTCGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTCCCTTTGTTCCCCTTTaGGGACAGATCATGGGACTA +
Preference number: 4 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPPFVPL*GQIMGL
Trigger: TAGTCCCATGATCTGTCCCCAAAGGGGAACAAAGGG...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTACCCTTTGTTCCCCTTTaGGGACAGATCATGGGACTA +
Preference number: 4 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLPFVPL*GQIMGL
Trigger: TAGTCCCATGATCTGTCCCCAAAGGGGAACAAAGGG...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTATCCCAGGACACTATCTaGGGAAGCCAGGAAATTCCT +
Preference number: 4 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLSQDTI*GSQEIP
Trigger: AGGAATTTCCTGGCTTCCCCAGATAGTGTCCTGGGA...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTAGACTCCTCTACCAACTaGGTGAGGAAAGGGACAATG +
Preference number: 4 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLDSSTN*VRKGTM
Trigger: CATTGTCCCTTTCCTCACCCAGTTGGTAGAGGAGTC...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357869.8
ENST00000550422.5
3UTR CAA 72 bp AAAGTCACTTGCATAATCCTCTCGGTAGGTAGCCCCTaGTTTTCCAGCTTGAGGGCAGACGAGCATGATCCA +
Preference number: 4 (lower is better)
Translates to: KVTCIILSVGSP*FSSLRADEHDP
Trigger: TGGATCATGCTCGTCTGCCCTCAAGCTGGAAAACAAGGGGCTACCTACCGAGAGGATTATGCAAGTGACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGCTAAGCACTTCCCACTaGCAAGCTATGAGTTTCATC +
Preference number: 4 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLLSTSH*QAMSFI
Trigger: GATGAAACTCATAGCTTGTCAGTGGGAAGTGCTTAG...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307885.4
CDS-3UTR TCA 90 bp AAGTTTAAGGTTCCTCTTCCCCACCCCGTAGTACCAGTATCCAGGTCCTCAGAGATGGAAACATTCTCCTaGAATATGGCCAAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: KFKVPLPHPVVPVSRSSEMETFS*NMAKAG
Trigger: GCCAGCTTTGGCCATATTTCAGGAGAATGTTTCCAT...CTCTGAGGACCTGGATACTGGTACTACGGGGTGGGGAAGAGGAACCTTAAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTCACAGGCTTGCTCTCTaGGCATTTTTCACAGTACCA +
Preference number: 4 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPHRLAL*AFFTVP
Trigger: TGGTACTGTGAAAAATGCTCAGAGAGCAAGCCTGTG...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp AGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGCATTCTCTCTACATCCCCTaGAGTAGGAAACCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: RKFLSLCPSNPRQFKCWHSLYIP*SRKPCF
Trigger: AAAGCAGGGTTTCCTACTTCAGGGGATGTAGAGAGA...ATGCCAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp GGGAATCTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAATACAGACAGAGAAACTaGGGCACCAACAAATTCAGG +
Preference number: 4 (lower is better)
Translates to: GNLEFNLLTLLPALKASQYRQRN*GTNKFR
Trigger: CCTGAATTTGTTGGTGCCTCAGTTTCTCTGTCTGTA...TTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAGATTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp AAAGGCAAGCATGGAATAGGCACTCCTCATGCCTGTCTTTGTACAAAATATTGTGAGGCCACTAAACCATaGCATGTTGCTGCCGGCCCG +
Preference number: 4 (lower is better)
Translates to: KGKHGIGTPHACLCTKYCEATKP*HVAAGP
Trigger: CGGGCCGGCAGCAACATGTCATGGTTTAGTGGCCTC...ACAATATTTTGTACAAAGACAGGCATGAGGAGTGCCTATTCCATGCTTGCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTAAAGTCTCAATGTGCTaGTCCTTGAGGTACGCGTTG +
Preference number: 4 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPKVSMC*SLRYAL
Trigger: CAACGCGTACCTCAAGGAGCAGCACATTGAGACTTT...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AAAGGCAAGCATGGAATAGGCACTCCTCATGCCTGTCTTTGTACAAAATATTGTGCAGCTGATCAATGCTaGGGGCATCGATGGCACGGC +
Preference number: 4 (lower is better)
Translates to: KGKHGIGTPHACLCTKYCAADQC*GHRWHG
Trigger: GCCGTGCCATCGATGCCCGCAGCATTGATCAGCTGC...ACAATATTTTGTACAAAGACAGGCATGAGGAGTGCCTATTCCATGCTTGCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AAAGGCAAGCATGGAATAGGCACTCCTCATGCCTGTCTTTGTACAAAATATTGTGTGAGCGGACAATGCTaGGGGACAGACGTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: KGKHGIGTPHACLCTKYCVSGQC*GTDVAG
Trigger: CCCTGCAACGTCTGTCCCGCAGCATTGTCCGCTCAC...ACAATATTTTGTACAAAGACAGGCATGAGGAGTGCCTATTCCATGCTTGCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AAAGGCAAGCATGGAATAGGCACTCCTCATGCCTGTCTTTGTACAAAATATTGTCCCTCCTCTGCTCTGTaGATAGGAGGGACACCTGGC +
Preference number: 4 (lower is better)
Translates to: KGKHGIGTPHACLCTKYCPSSAL*IGGTPG
Trigger: GCCAGGTGTCCCTCCTATGCACAGAGCAGAGGAGGG...ACAATATTTTGTACAAAGACAGGCATGAGGAGTGCCTATTCCATGCTTGCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTCCCGGTTGTCTTTGCTaGAATCATCAATGCCCATCT +
Preference number: 4 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPPGCLC*NHQCPS
Trigger: AGATGGGCATTGATGATTCCAGCAAAGACAACCGGG...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTTTGCAAAGGCAAGCATaGAATAGGCACTCCTCATGC +
Preference number: 4 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPLQRQA*NRHSSC
Trigger: GCATGAGGAGTGCCTATTCCATGCTTGCCTTTGCAA...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTTACAGACAGAGAAACTaGGGCACCAACAAATTCAGG +
Preference number: 4 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPYRQRN*GTNKFR
Trigger: CCTGAATTTGTTGGTGCCTCAGTTTCTCTGTCTGTA...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp AAAGGCAAGCATGGAATAGGCACTCCTCATGCCTGTCTTTGTACAAAATATTGTCAAGCCACCCAAGGCTaGGGTCTTCCCACTCTGATC +
Preference number: 4 (lower is better)
Translates to: KGKHGIGTPHACLCTKYCQATQG*GLPTLI
Trigger: GATCAGAGTGGGAAGACCTCAGCCTTGGGTGGCTTG...ACAATATTTTGTACAAAGACAGGCATGAGGAGTGCCTATTCCATGCTTGCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp CCCGAACGGCACTTAGGGATTTGGCACAAAAAGGACTCCTCTCCCTCCTTTTGCAGAAAGAAAGTCACTTaGATAATCCTCTCGGTAGGT +
Preference number: 4 (lower is better)
Translates to: PERHLGIWHKKDSSPSFCRKKVT*IILSVG
Trigger: ACCTACCGAGAGGATTATGCAAGTGACTTTCTTTCT...GCAAAAGGAGGGAGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGTTCGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGCATGGTCACCTTTCTCCATaGCCTGACCCTTTTCTATTT +
Preference number: 4 (lower is better)
Translates to: RKFLSLCPSNPRQFKCWHGHLSP*PDPFLF
Trigger: AAATAGAAAAGGGTCAGGGCATGGAGAAAGGTGACC...ATGCCAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AAAGGCAAGCATGGAATAGGCACTCCTCATGCCTGTCTTTGTACAAAATATTGTAGACAGGGAGAGTCATaGTGCACACATGGCCCCCGA +
Preference number: 4 (lower is better)
Translates to: KGKHGIGTPHACLCTKYCRQGES*CTHGPR
Trigger: TCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCT...ACAATATTTTGTACAAAGACAGGCATGAGGAGTGCCTATTCCATGCTTGCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AAAGGCAAGCATGGAATAGGCACTCCTCATGCCTGTCTTTGTACAAAATATTGTAAGCGCTTGGGTCCCTaGCACAGACAGGGAGAGTCA +
Preference number: 4 (lower is better)
Translates to: KGKHGIGTPHACLCTKYCKRLGP*HRQGES
Trigger: TGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTT...ACAATATTTTGTACAAAGACAGGCATGAGGAGTGCCTATTCCATGCTTGCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGCATGAAACCCTTCTCCTCTaGCTCTCTAGTCATTTCCAA +
Preference number: 4 (lower is better)
Translates to: RKFLSLCPSNPRQFKCWHETLLL*LSSHFQ
Trigger: TTGGAAATGACTAGAGAGGCAGAGGAGAAGGGTTTC...ATGCCAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTCATCAAAGGTCTCATTaGAAGAAGCCAAGCCATGGA +
Preference number: 4 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPHQRSH*KKPSHG
Trigger: TCCATGGCTTGGCTTCTTCCAATGAGACCTTTGATG...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AAAGGCAAGCATGGAATAGGCACTCCTCATGCCTGTCTTTGTACAAAATATTGTGACACCTGCCACGACTaGGCCCATGTTCAGCCCAAT +
Preference number: 4 (lower is better)
Translates to: KGKHGIGTPHACLCTKYCDTCHD*AHVQPN
Trigger: ATTGGGCTGAACATGGGCCCAGTCGTGGCAGGTGTC...ACAATATTTTGTACAAAGACAGGCATGAGGAGTGCCTATTCCATGCTTGCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AAAGGCAAGCATGGAATAGGCACTCCTCATGCCTGTCTTTGTACAAAATATTGTACAGGCCCTCCCACCTaGCAAGAAGCAGAGACAAGC +
Preference number: 4 (lower is better)
Translates to: KGKHGIGTPHACLCTKYCTGPPT*QEAETS
Trigger: GCTTGTCTCTGCTTCTTGCCAGGTGGGAGGGCCTGT...ACAATATTTTGTACAAAGACAGGCATGAGGAGTGCCTATTCCATGCTTGCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp AAAGGCAAGCATGGAATAGGCACTCCTCATGCCTGTCTTTGTACAAAATATTGTTTTTCACAGTACCAGTaGGGCCAGACACCCCGTTCC +
Preference number: 4 (lower is better)
Translates to: KGKHGIGTPHACLCTKYCFSQYQ*GQTPRS
Trigger: GGAACGGGGTGTCTGGCCTCACTGGTACTGTGAAAA...ACAATATTTTGTACAAAGACAGGCATGAGGAGTGCCTATTCCATGCTTGCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AAAGGCAAGCATGGAATAGGCACTCCTCATGCCTGTCTTTGTACAAAATATTGTCTGAGGCAGGAGAATTaGTTGAACCCGGGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: KGKHGIGTPHACLCTKYCLRQEN*LNPGGR
Trigger: TCTGCCACCCGGGTTCAAGCAATTCTCCTGCCTCAG...ACAATATTTTGTACAAAGACAGGCATGAGGAGTGCCTATTCCATGCTTGCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307885.4
CDS-3UTR GCA 90 bp GGGAATCTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAAGAAAGAAAGTCACTTaGATAATCCTCTCGGTAGGT +
Preference number: 4 (lower is better)
Translates to: GNLEFNLLTLLPALKASQRKKVT*IILSVG
Trigger: ACCTACCGAGAGGATTATGCAAGTGACTTTCTTTCT...TTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAGATTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGAGAAAGAAAGTCACTTaGATAATCCTCTCGGTAGGT +
Preference number: 4 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLRKKVT*IILSVG
Trigger: ACCTACCGAGAGGATTATGCAAGTGACTTTCTTTCT...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp TGTCCCAGGACACTATCTGGGGAAGCCAGGAAATTCCTCAGCCTCTGTCCATCAAATAGGCACTCCTCATaGCTGTCTTTGTACAAAATA +
Preference number: 4 (lower is better)
Translates to: CPRTLSGEARKFLSLCPSNRHSS*LSLYKI
Trigger: TATTTTGTACAAAGACAGGCATGAGGAGTGCCTATT...TGATGGACAGAGGCTGAGGAATTTCCTGGCTTCCCCAGATAGTGTCCTGGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AAAGGCAAGCATGGAATAGGCACTCCTCATGCCTGTCTTTGTACAAAATATTGTTCATCAATGCCCATCTaGCGGAAGGCCTTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: KGKHGIGTPHACLCTKYCSSMPI*RKALES
Trigger: GGACTCCAAGGCCTTCCGCCAGATGGGCATTGATGA...ACAATATTTTGTACAAAGACAGGCATGAGGAGTGCCTATTCCATGCTTGCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AAAGGCAAGCATGGAATAGGCACTCCTCATGCCTGTCTTTGTACAAAATATTGTCCAGATGTCATACTGTaGCTTCCGAGCCCCGATGAC +
Preference number: 4 (lower is better)
Translates to: KGKHGIGTPHACLCTKYCPDVIL*LPSPDD
Trigger: GTCATCGGGGCTCGGAAGCCACAGTATGACATCTGG...ACAATATTTTGTACAAAGACAGGCATGAGGAGTGCCTATTCCATGCTTGCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AAAGGCAAGCATGGAATAGGCACTCCTCATGCCTGTCTTTGTACAAAATATTGTTTGGCAGCTAGAACCTaGTACAGGTCCGTGGTCACC +
Preference number: 4 (lower is better)
Translates to: KGKHGIGTPHACLCTKYCLAART*YRSVVT
Trigger: GGTGACCACGGACCTGTACCAGGTTCTAGCTGCCAA...ACAATATTTTGTACAAAGACAGGCATGAGGAGTGCCTATTCCATGCTTGCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
3UTR CAA 72 bp CTAAATCTAAGCTGTCAGAGGTCCCTTTGTTCCCCTTaGGGGACAGATCATGGGACTAAGATTTGGCACATG +
Preference number: 4 (lower is better)
Translates to: LNLSCQRSLCSP*GTDHGTKIWHM
Trigger: CATGTGCCAAATCTTAGTCCCATGATCTGTCCCCAAAGGGGAACAAAGGGACCTCTGACAGCTTAGATTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AAAGGCAAGCATGGAATAGGCACTCCTCATGCCTGTCTTTGTACAAAATATTGTACATTGGCACCGAGCTaGTTCCAGAGGAAGGCATCA +
Preference number: 4 (lower is better)
Translates to: KGKHGIGTPHACLCTKYCTLAPS*FQRKAS
Trigger: TGATGCCTTCCTCTGGAAGCAGCTCGGTGCCAATGT...ACAATATTTTGTACAAAGACAGGCATGAGGAGTGCCTATTCCATGCTTGCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGAATAGGCACTCCTCATaGCTGTCTTTGTACAAAATA +
Preference number: 4 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLNRHSS*LSLYKI
Trigger: TATTTTGTACAAAGACAGGCATGAGGAGTGCCTATT...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AAAGGCAAGCATGGAATAGGCACTCCTCATGCCTGTCTTTGTACAAAATATTGTGACCAGTGCTGGGGATaGAGGTATTGCAAAGGCAAG +
Preference number: 4 (lower is better)
Translates to: KGKHGIGTPHACLCTKYCDQCWG*RYCKGK
Trigger: CTTGCCTTTGCAATACCTGCATCCCCAGCACTGGTC...ACAATATTTTGTACAAAGACAGGCATGAGGAGTGCCTATTCCATGCTTGCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AAAGGCAAGCATGGAATAGGCACTCCTCATGCCTGTCTTTGTACAAAATATTGTCTGAGACACCTCTGCTaGATAGTGTGTGCAGATGCC +
Preference number: 4 (lower is better)
Translates to: KGKHGIGTPHACLCTKYCLRHLC*IVCADA
Trigger: GGCATCTGCACACACTATCCAGCAGAGGTGTCTCAG...ACAATATTTTGTACAAAGACAGGCATGAGGAGTGCCTATTCCATGCTTGCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AAAGGCAAGCATGGAATAGGCACTCCTCATGCCTGTCTTTGTACAAAATATTGTAGTTGTCAAAGATGGTaGCTGGGGGACCCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: KGKHGIGTPHACLCTKYCSCQRW*LGDPAE
Trigger: TTCTGCTGGGTCCCCCAGCCACCATCTTTGACAACT...ACAATATTTTGTACAAAGACAGGCATGAGGAGTGCCTATTCCATGCTTGCCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AAAGGCAAGCATGGAATAGGCACTCCTCATGCCTGTCTTTGTACAAAATATTGTGGATGTTCCCTTTTGTaGTTAGCAGGGTCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: KGKHGIGTPHACLCTKYCGCSLL*LAGSGG
Trigger: GCCTCCAGACCCTGCTAACCACAAAAGGGAACATCC...ACAATATTTTGTACAAAGACAGGCATGAGGAGTGCCTATTCCATGCTTGCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR TCA 90 bp AAAGGCAAGCATGGAATAGGCACTCCTCATGCCTGTCTTTGTACAAAATATTGTCCCCTCCTTCTGCCATaGCTAATGAAGTACCTGATG +
Preference number: 4 (lower is better)
Translates to: KGKHGIGTPHACLCTKYCPLLLP*LMKYLM
Trigger: CATCAGGTACTTCATTAGTCATGGCAGAAGGAGGGG...ACAATATTTTGTACAAAGACAGGCATGAGGAGTGCCTATTCCATGCTTGCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AAAGGCAAGCATGGAATAGGCACTCCTCATGCCTGTCTTTGTACAAAATATTGTAGCGTCAGGCTGCTCTaGTTCATCTGGAAGAAGTAC +
Preference number: 4 (lower is better)
Translates to: KGKHGIGTPHACLCTKYCSVRLL*FIWKKY
Trigger: GTACTTCTTCCAGATGAACCAGAGCAGCCTGACGCT...ACAATATTTTGTACAAAGACAGGCATGAGGAGTGCCTATTCCATGCTTGCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AAAGGCAAGCATGGAATAGGCACTCCTCATGCCTGTCTTTGTACAAAATATTGTTCAAGATCCTCTCTCTaGAAGGTGAGCAGAAACCGG +
Preference number: 4 (lower is better)
Translates to: KGKHGIGTPHACLCTKYCSRSSL*KVSRNR
Trigger: CCGGTTTCTGCTCACCTTCCAGAGAGAGGATCTTGA...ACAATATTTTGTACAAAGACAGGCATGAGGAGTGCCTATTCCATGCTTGCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CCA 90 bp AAAGGCAAGCATGGAATAGGCACTCCTCATGCCTGTCTTTGTACAAAATATTGTGGCTTCACAAGGGACTaGGGAGCTAGAAACATGCTA +
Preference number: 4 (lower is better)
Translates to: KGKHGIGTPHACLCTKYCGFTRD*GARNML
Trigger: TAGCATGTTTCTAGCTCCCCAGTCCCTTGTGAAGCC...ACAATATTTTGTACAAAGACAGGCATGAGGAGTGCCTATTCCATGCTTGCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AAAGGCAAGCATGGAATAGGCACTCCTCATGCCTGTCTTTGTACAAAATATTGTGACACCCTCATTGTTTaGCTCCAGCTCCACATAGAA +
Preference number: 4 (lower is better)
Translates to: KGKHGIGTPHACLCTKYCDTLIV*LQLHIE
Trigger: TTCTATGTGGAGCTGGAGGCAAACAATGAGGGTGTC...ACAATATTTTGTACAAAGACAGGCATGAGGAGTGCCTATTCCATGCTTGCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR GCA 90 bp AAAGGCAAGCATGGAATAGGCACTCCTCATGCCTGTCTTTGTACAAAATATTGTGAAACCCTTCTCCTCTaGCTCTCTAGTCATTTCCAA +
Preference number: 4 (lower is better)
Translates to: KGKHGIGTPHACLCTKYCETLLL*LSSHFQ
Trigger: TTGGAAATGACTAGAGAGGCAGAGGAGAAGGGTTTC...ACAATATTTTGTACAAAGACAGGCATGAGGAGTGCCTATTCCATGCTTGCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS GCA 90 bp GCGGGTCTGCTGCGAGAGCGCCCCCGACCTGCACTGCCGCCAGGATaGCCAGCACCACGTAGCTCACCACCCACATGGAGTCCTGGCGGA +
Preference number: 5 (lower is better)
Translates to: AGLLRERPRPALPPG*PAPRSSPPTWSPGG
Trigger: TCCGCCAGGACTCCATGTGGGTGGTGAGCTACGTGGTGCTGGGCATCCTGGCGGCAGTGCAGGTCGGGGGCGCTCTCGCAGCAGACCCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS GCA 90 bp AGAGGGGCTGCGCGGGTCTGCTGCGAGAGCGCCCCCGACCTGCACTaGCGCCAGGATGCCCAGCACCACGTAGCTCACCACCCACATGGA +
Preference number: 5 (lower is better)
Translates to: RGAARVCCESAPDLH*RQDAQHHVAHHPHG
Trigger: TCCATGTGGGTGGTGAGCTACGTGGTGCTGGGCATCCTGGCGGCAGTGCAGGTCGGGGGCGCTCTCGCAGCAGACCCGCGCAGCCCCTCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS GCA 90 bp GGCTGGGTGGCTCTGCATCCCGGAGGCAGCTCATATAGCGGGGCGTaGAGAAGCCACCTGCCCGAGTGCCACGGCGCCGCGAACGCTTCT +
Preference number: 5 (lower is better)
Translates to: GWVALHPGGSSYSGA*RSHLPECHGAANAS
Trigger: AGAAGCGTTCGCGGCGCCGTGGCACTCGGGCAGGTGGCTTCTGCACGCCCCGCTATATGAGCTGCCTCCGGGATGCAGAGCCACCCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS GCA 90 bp GGCACAGGCCAACAGTGCCACATAGGCAGGCTGAGGGCGGGCGGGTaGGGCGTGGAAAGCCAGCAGCACCGCTGTGAGCAGCACCAGCAC +
Preference number: 5 (lower is better)
Translates to: GTGQQCHIGRLRAGG*GVESQQHRCEQHQH
Trigger: GTGCTGGTGCTGCTCACAGCGGTGCTGCTGGCTTTCCACGCCGCACCCGCCCGCCCTCAGCCTGCCTATGTGGCACTGTTGGCCTGTGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS GCA 90 bp GGAGGCAGCTCATATAGCGGGGCGTGCAGAAGCCACCTGCCCGAGTaGCACGGCGCCGCGAACGCTTCTGCCCATTGCGTTCACCCCAGG +
Preference number: 5 (lower is better)
Translates to: GGSSYSGACRSHLPE*HGAANASAHCVHPR
Trigger: CCTGGGGTGAACGCAATGGGCAGAAGCGTTCGCGGCGCCGTGGCACTCGGGCAGGTGGCTTCTGCACGCCCCGCTATATGAGCTGCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS GCA 90 bp AGGCGCTCCAGCTTGGCCGAACGGAACTGCTTCGACTGGAACACCTaGACCAGACGGCGCCAGCAGGATCGCCCACTCCTGGGCACCGCG +
Preference number: 5 (lower is better)
Translates to: RRSSLAERNCFDWNT*TRRRQQDRPLLGTA
Trigger: CGCGGTGCCCAGGAGTGGGCGATCCTGCTGGCGCCGTCTGGTGCAGGTGTTCCAGTCGAAGCAGTTCCGTTCGGCCAAGCTGGAGCGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS GCA 90 bp TGCATCCCGGAGGCAGCTCATATAGCGGGGCGTGCAGAAGCCACCTaGCCGAGTGCCACGGCGCCGCGAACGCTTCTGCCCATTGCGTTC +
Preference number: 5 (lower is better)
Translates to: CIPEAAHIAGRAEAT*PSATAPRTLLPIAF
Trigger: GAACGCAATGGGCAGAAGCGTTCGCGGCGCCGTGGCACTCGGGCAGGTGGCTTCTGCACGCCCCGCTATATGAGCTGCCTCCGGGATGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp GGGGAAGTGCCCAGGACCAGTGCTGGGGATGCAGGTATTGCAAAGGCAAGCATGCGCAGCCCCAGCTCCTaGCCCTTGCCTGGGCCGCCC +
Preference number: 5 (lower is better)
Translates to: GEVPRTSAGDAGIAKASMRSPSS*PLPGPP
Trigger: GGGCGGCCCAGGCAAGGGCAAGGAGCTGGGGCTGCG...CATGCTTGCCTTTGCAATACCTGCATCCCCAGCACTGGTCCTGGGCACTTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp AACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGGGGAGCTACGCAGCCCCAGCTCCTaGCCCTTGCCTGGGCCGCCC +
Preference number: 5 (lower is better)
Translates to: NLLTLLPALKASQGTGELRSPSS*PLPGPP
Trigger: GGGCGGCCCAGGCAAGGGCAAGGAGCTGGGGCTGCG...TAGCTCCCCAGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS CCA 90 bp GCGGCATCAGCCCTTCCATGGAGTTGGCCCGAGTCCGCTGCAGCTTaGCCAGCATGGCCTTCTCCTCTTTCCGTTTCTGGCTGGCGCCCA +
Preference number: 5 (lower is better)
Translates to: AASALPWSWPESAAA*PAWPSPLSVSGWRP
Trigger: TGGGCGCCAGCCAGAAACGGAAAGAGGAGAAGGCCATGCTGGCCAAGCTGCAGCGGACTCGGGCCAACTCCATGGAAGGGCTGATGCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
ENST00000552090.1
CDS CCA 90 bp GGGAGAAGGCACGATCAGGAACCCAGCGCGGCATCAGCCCTTCCATaGAGTTGGCCCGAGTCCGCTGCAGCTTGGCCAGCATGGCCTTCT +
Preference number: 5 (lower is better)
Translates to: GRRHDQEPSAASALP*SWPESAAAWPAWPS
Trigger: AGAAGGCCATGCTGGCCAAGCTGCAGCGGACTCGGGCCAACTCCATGGAAGGGCTGATGCCGCGCTGGGTTCCTGATCGTGCCTTCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
ENST00000552090.1
CDS CCA 90 bp CCCCACCGCCTGAGCACTGCTCGAACACCTCAGGAAAGCTGCAGGTaGGCATGGTGCCCTCACACAGGGGAGCATCCAGGCCCAGAGAGT +
Preference number: 5 (lower is better)
Translates to: PHRLSTARTPQESCR*AWCPHTGEHPGPES
Trigger: ACTCTCTGGGCCTGGATGCTCCCCTGTGTGAGGGCACCATGCCCACCTGCAGCTTTCCTGAGGTGTTCGAGCAGTGCTCAGGCGGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552099.5
CDS CCA 90 bp CAGGGCCCCTGGTTGCTCCTAGTGTGGGAGACTCTGGTGAGTTCCTaGGTCCCCAGCGCCCATCACCAGGCCTGGCACAGAAGGGCCAAT +
Preference number: 5 (lower is better)
Translates to: QGPWLLLVWETLVSS*VPSAHHQAWHRRAN
Trigger: ATTGGCCCTTCTGTGCCAGGCCTGGTGATGGGCGCTGGGGACCCAGGAACTCACCAGAGTCTCCCACACTAGGAGCAACCAGGGGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552099.5
CDS TCA 90 bp CCCACATGGAGTCCTGGCGGAAGCTATGCCGGTTACACACCACCATaGGCCCCACGAACAGGGCGGCGGCACAGGCCAACAGTGCCACAT +
Preference number: 5 (lower is better)
Translates to: PTWSPGGSYAGYTPP*APRTGRRHRPTVPH
Trigger: ATGTGGCACTGTTGGCCTGTGCCGCCGCCCTGTTCGTGGGGCTCATGGTGGTGTGTAACCGGCATAGCTTCCGCCAGGACTCCATGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS TCA 90 bp TGTTTTCCGTTCATCCACTTTAGGGACCAGGAGGCCACTAAACCATaGCATGTTGCTGCCGGCCCGGCTCCGCGCCTGCCCTGGGCCCCC +
Preference number: 5 (lower is better)
Translates to: CFPFIHFRDQEATKP*HVAAGPAPRLPWAP
Trigger: GGGGGCCCAGGGCAGGCGCGGAGCCGGGCCGGCAGCAACATGTCATGGTTTAGTGGCCTCCTGGTCCCTAAAGTGGATGAACGGAAAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357869.8
ENST00000550422.5
CDS GCA 90 bp ACCCAGCGCGGCATCAGCCCTTCCATGGAGTTGGCCCGAGTCCGCTaGAGCTTGGCCAGCATGGCCTTCTCCTCTTTCCGTTTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: TQRGISPSMELARVR*SLASMAFSSFRFWL
Trigger: CAGCCAGAAACGGAAAGAGGAGAAGGCCATGCTGGCCAAGCTGCAGCGGACTCGGGCCAACTCCATGGAAGGGCTGATGCCGCGCTGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
ENST00000552090.1
CDS-3UTR CAA 90 bp CCCGAACGGCACTTAGGGATTTGGCACAAAAAGGACTCCTCTCCCTCCTTTTGCCGCAGCCCCAGCTCCTaGCCCTTGCCTGGGCCGCCC +
Preference number: 5 (lower is better)
Translates to: PERHLGIWHKKDSSPSFCRSPSS*PLPGPP
Trigger: GGGCGGCCCAGGCAAGGGCAAGGAGCTGGGGCTGCG...GCAAAAGGAGGGAGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGTTCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp TGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCCGAACGGCACTTAGGAGCCCTTCCATGGAGTaGGCCCGAGTCCGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: CHRQGESCCTHGPRTALRSPSME*ARVRCS
Trigger: GCTGCAGCGGACTCGGGCCAACTCCATGGAAGGGCT...CCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp TGCCCCCTGCCACAGCTCCACCCAGTGAGCACAGAGTCCACTCAATGCCCACCTGCTGCGGGACAGACGTaGCAGGGCCTTAGGGAACAG +
Preference number: 5 (lower is better)
Translates to: CPLPQLHPVSTESTQCPPAAGQT*QGLREQ
Trigger: CTGTTCCCTAAGGCCCTGCAACGTCTGTCCCGCAGC...AGGTGGGCATTGAGTGGACTCTGTGCTCACTGGGTGGAGCTGTGGCAGGGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp TGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCCGAACGGCACTTAGGTCCCGCCCGCTGTCGTaGTCACCTCGGTATCCTCGA +
Preference number: 5 (lower is better)
Translates to: CHRQGESCCTHGPRTALRSRPLS*SPRYPR
Trigger: TCGAGGATACCGAGGTGACAACGACAGCGGGCGGGA...CCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS GCA 90 bp GTGCAGAAGCCACCTGCCCGAGTGCCACGGCGCCGCGAACGCTTCTaGCCATTGCGTTCACCCCAGGCTGTTTTCCGTTCATCCACTTTA +
Preference number: 5 (lower is better)
Translates to: VQKPPARVPRRRERF*PLRSPQAVFRSSTL
Trigger: TAAAGTGGATGAACGGAAAACAGCCTGGGGTGAACGCAATGGGCAGAAGCGTTCGCGGCGCCGTGGCACTCGGGCAGGTGGCTTCTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS GCA 90 bp CAGAGGAAGGCATCACCACGGTTAAGTTGCCAGGCCAAGATCAAATaGAAGGTGGAGAGGCCCAGGCCGCTGAGGACGGCAGCCCGCATG +
Preference number: 5 (lower is better)
Translates to: QRKASPRLSCQAKIK*KVERPRPLRTAARM
Trigger: CATGCGGGCTGCCGTCCTCAGCGGCCTGGGCCTCTCCACCTTGCATTTGATCTTGGCCTGGCAACTTAACCGTGGTGATGCCTTCCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS CCA 90 bp TGCTGGAATCATCAATGCCCATCTGGCGGAAGGCCTTGGAGTCCTTaGTCCGGGAGAAGGCACGATCAGGAACCCAGCGCGGCATCAGCC +
Preference number: 5 (lower is better)
Translates to: CWNHQCPSGGRPWSP*SGRRHDQEPSAASA
Trigger: GGCTGATGCCGCGCTGGGTTCCTGATCGTGCCTTCTCCCGGACCAAGGACTCCAAGGCCTTCCGCCAGATGGGCATTGATGATTCCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
ENST00000552090.1
CDS-3UTR CAA 90 bp TGCCCCCTGCCACAGCTCCACCCAGTGAGCACAGAGTCCACTCAATGCCCACCTGAACGCTTCTGCCCATaGCGTTCACCCCAGGCTGTT +
Preference number: 5 (lower is better)
Translates to: CPLPQLHPVSTESTQCPPERFCP*RSPQAV
Trigger: AACAGCCTGGGGTGAACGCAATGGGCAGAAGCGTTC...AGGTGGGCATTGAGTGGACTCTGTGCTCACTGGGTGGAGCTGTGGCAGGGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGTCCCGCCCGCTGTCGTaGTCACCTCGGTATCCTCGA +
Preference number: 5 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWSRPLS*SPRYPR
Trigger: TCGAGGATACCGAGGTGACAACGACAGCGGGCGGGA...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp GGGGAAGTGCCCAGGACCAGTGCTGGGGATGCAGGTATTGCAAAGGCAAGCATGTCCCGCCCGCTGTCGTaGTCACCTCGGTATCCTCGA +
Preference number: 5 (lower is better)
Translates to: GEVPRTSAGDAGIAKASMSRPLS*SPRYPR
Trigger: TCGAGGATACCGAGGTGACAACGACAGCGGGCGGGA...CATGCTTGCCTTTGCAATACCTGCATCCCCAGCACTGGTCCTGGGCACTTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp CTTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACAAGCCCTTCCATGGAGTaGGCCCGAGTCCGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: LKQALGSLPQTGRVMLHTSPSME*ARVRCS
Trigger: GCTGCAGCGGACTCGGGCCAACTCCATGGAAGGGCT...TGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp GGGGAAGTGCCCAGGACCAGTGCTGGGGATGCAGGTATTGCAAAGGCAAGCATGATCTGGCGGAAGGCCTaGGAGTCCTTGGTCCGGGAG +
Preference number: 5 (lower is better)
Translates to: GEVPRTSAGDAGIAKASMIWRKA*ESLVRE
Trigger: CTCCCGGACCAAGGACTCCAAGGCCTTCCGCCAGAT...CATGCTTGCCTTTGCAATACCTGCATCCCCAGCACTGGTCCTGGGCACTTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp TGCCCCCTGCCACAGCTCCACCCAGTGAGCACAGAGTCCACTCAATGCCCACCTAGGGTTCAGGGCATCTaGGGTGCCCCGGTTGTCTTT +
Preference number: 5 (lower is better)
Translates to: CPLPQLHPVSTESTQCPPRVQGI*GAPVVF
Trigger: AAAGACAACCGGGGCACCCAAGATGCCCTGAACCCT...AGGTGGGCATTGAGTGGACTCTGTGCTCACTGGGTGGAGCTGTGGCAGGGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp TGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCCGAACGGCACTTAGGTGGGCCGCCACGTCCTaGGGCAGAATGTTATGCAGC +
Preference number: 5 (lower is better)
Translates to: CHRQGESCCTHGPRTALRWAATS*GRMLCS
Trigger: GCTGCATAACATTCTGCCCAAGGACGTGGCGGCCCA...CCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCTTGCCCTTCACCTaGACCACCCCTCGACACTCC +
Preference number: 5 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWPLPFT*TTPRHS
Trigger: GGAGTGTCGAGGGGTGGTCAAGGTGAAGGGCAAGGG...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp TGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCCGAACGGCACTTAGGTGGCCGGCCTGCTCTTaGGCACCTGCAGGTGAACTT +
Preference number: 5 (lower is better)
Translates to: CHRQGESCCTHGPRTALRWPACS*APAGEL
Trigger: AAGTTCACCTGCAGGTGCCAAAGAGCAGGCCGGCCA...CCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS TCA 90 bp CTCTGGAAGGTGAGCAGAAACCGGCGCACATGGTCCTTCCGCAGCTaGTCAATGCTGCGGGCATCGATGGCACGGCTCAGGAACTCATCC +
Preference number: 5 (lower is better)
Translates to: LWKVSRNRRTWSFRS*SMLRASMARLRNSS
Trigger: GGATGAGTTCCTGAGCCGTGCCATCGATGCCCGCAGCATTGATCAGCTGCGGAAGGACCATGTGCGCCGGTTTCTGCTCACCTTCCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
ENST00000552090.1
CDS TCA 90 bp CACAAGCAGGACGGAAAAGATGCCAACTGCGGTGCTATGTGCCCGTaGGCGGACAATGCTGCGGGACAGACGTTGCAGGGCTGTGGGAAG +
Preference number: 5 (lower is better)
Translates to: HKQDGKDANCGAMCP*ADNAAGQTLQGCGK
Trigger: CTTCCCACAGCCCTGCAACGTCTGTCCCGCAGCATTGTCCGCTCACGGGCACATAGCACCGCAGTTGGCATCTTTTCCGTCCTGCTTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552090.1
CDS GCA 90 bp CCCACCACCCTCCACGCATACTCTATCTGCCCTCAAATCCCCAGCTaGTGCCAGCAAAGCTATGCTCTCACCACGGTCAACACCCAGGCC +
Preference number: 5 (lower is better)
Translates to: PTTLHAYSICPQIPS*CQQSYALTTVNTQA
Trigger: GGCCTGGGTGTTGACCGTGGTGAGAGCATAGCTTTGCTGGCAGCAGCTGGGGATTTGAGGGCAGATAGAGTATGCGTGGAGGGTGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551435.1
CDS-3UTR CAA 90 bp TGCCCCCTGCCACAGCTCCACCCAGTGAGCACAGAGTCCACTCAATGCCCACCTCAGATGCCAATGACGTaGGTGCAGAGGAACAGCAGC +
Preference number: 5 (lower is better)
Translates to: CPLPQLHPVSTESTQCPPQMPMT*VQRNSS
Trigger: GCTGCTGTTCCTCTGCACCAACGTCATTGGCATCTG...AGGTGGGCATTGAGTGGACTCTGTGCTCACTGGGTGGAGCTGTGGCAGGGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp TGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCCGAACGGCACTTAGGAGGGTTCAGGGCATCTaGGGTGCCCCGGTTGTCTTT +
Preference number: 5 (lower is better)
Translates to: CHRQGESCCTHGPRTALRRVQGI*GAPVVF
Trigger: AAAGACAACCGGGGCACCCAAGATGCCCTGAACCCT...CCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp TGCCCCCTGCCACAGCTCCACCCAGTGAGCACAGAGTCCACTCAATGCCCACCTACAGGGGTCATATATTaGAGGGCCACCCTCCCTGCA +
Preference number: 5 (lower is better)
Translates to: CPLPQLHPVSTESTQCPPTGVIY*RATLPA
Trigger: TGCAGGGAGGGTGGCCCTCAAATATATGACCCCTGT...AGGTGGGCATTGAGTGGACTCTGTGCTCACTGGGTGGAGCTGTGGCAGGGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGTGCAGCAGCCTCCGGTaGTATGCCTGTAGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWCSSLR*YACSSS
Trigger: GGAGGAGCTACAGGCATACAACCGGAGGCTGCTGCA...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp AACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGGGGAGCTACCCTTGCCCTTCACCTaGACCACCCCTCGACACTCC +
Preference number: 5 (lower is better)
Translates to: NLLTLLPALKASQGTGELPLPFT*TTPRHS
Trigger: GGAGTGTCGAGGGGTGGTCAAGGTGAAGGGCAAGGG...TAGCTCCCCAGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp TGCCCCCTGCCACAGCTCCACCCAGTGAGCACAGAGTCCACTCAATGCCCACCTATGCTCCATGCCCCCTaGTCAGCAGACAGCAAGAGA +
Preference number: 5 (lower is better)
Translates to: CPLPQLHPVSTESTQCPPMLHAP*SADSKR
Trigger: TCTCTTGCTGTCTGCTGACAAGGGGGCATGGAGCAT...AGGTGGGCATTGAGTGGACTCTGTGCTCACTGGGTGGAGCTGTGGCAGGGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp TGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCCGAACGGCACTTAGGCCCAACACCAGAGACTaGGGAGGGCAGGTTTGGGAT +
Preference number: 5 (lower is better)
Translates to: CHRQGESCCTHGPRTALRPNTRD*GGQVWD
Trigger: ATCCCAAACCTGCCCTCCCAAGTCTCTGGTGTTGGG...CCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS TCA 90 bp CACAAGCAGGACGGAAAAGATGCCAACTGCGGTGCTATGTGCCCGTaGGCGGACAATGCTGCGGGACAGACGTTGCAGGGCCTTAGGGAA +
Preference number: 5 (lower is better)
Translates to: HKQDGKDANCGAMCP*ADNAAGQTLQGLRE
Trigger: TTCCCTAAGGCCCTGCAACGTCTGTCCCGCAGCATTGTCCGCTCACGGGCACATAGCACCGCAGTTGGCATCTTTTCCGTCCTGCTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
ENST00000552099.5
CDS GCA 90 bp TTGGCACCGAGCTGCTTCCAGAGGAAGGCATCACCACGGTTAAGTTaGCAGGCCAAGATCAAATGCAAGGTGGAGAGGCCCAGGCCGCTG +
Preference number: 5 (lower is better)
Translates to: LAPSCFQRKASPRLS*QAKIKCKVERPRPL
Trigger: CAGCGGCCTGGGCCTCTCCACCTTGCATTTGATCTTGGCCTGGCAACTTAACCGTGGTGATGCCTTCCTCTGGAAGCAGCTCGGTGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS GCA 90 bp CGGAAAAGATGCCAACTGCGGTGCTATGTGCCCGTGAGCGGACAATaGTGCGGGACAGACGTTGCAGGGCTGTGGGAAGATGAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: RKRCQLRCYVPVSGQ*CGTDVAGLWEDEKL
Trigger: CAGCTTCTCATCTTCCCACAGCCCTGCAACGTCTGTCCCGCAGCATTGTCCGCTCACGGGCACATAGCACCGCAGTTGGCATCTTTTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552090.1
CDS-3UTR CAA 90 bp GGGGAAGTGCCCAGGACCAGTGCTGGGGATGCAGGTATTGCAAAGGCAAGCATGAGGCAGGAGAATTGCTaGAACCCGGGTGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: GEVPRTSAGDAGIAKASMRQENC*NPGGRG
Trigger: ACCTCTGCCACCCGGGTTCAAGCAATTCTCCTGCCT...CATGCTTGCCTTTGCAATACCTGCATCCCCAGCACTGGTCCTGGGCACTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307885.4
CDS-3UTR CAA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGAGGAACAGCAGCACATaGGCACCGAGCTGCTTCCAG +
Preference number: 5 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWRNSST*APSCFQ
Trigger: CTGGAAGCAGCTCGGTGCCAATGTGCTGCTGTTCCT...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp CTTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGCAGCAGCCTCCGGTaGTATGCCTGTAGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: LKQALGSLPQTGRVMLHTCSSLR*YACSSS
Trigger: GGAGGAGCTACAGGCATACAACCGGAGGCTGCTGCA...TGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp CTTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGGCCGCCACGTCCTaGGGCAGAATGTTATGCAGC +
Preference number: 5 (lower is better)
Translates to: LKQALGSLPQTGRVMLHTWAATS*GRMLCS
Trigger: GCTGCATAACATTCTGCCCAAGGACGTGGCGGCCCA...TGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp TGCCCCCTGCCACAGCTCCACCCAGTGAGCACAGAGTCCACTCAATGCCCACCTCCCTTGTTTTCCAGCTaGAGGGCAGACGAGCATGAT +
Preference number: 5 (lower is better)
Translates to: CPLPQLHPVSTESTQCPPPLFSS*RADEHD
Trigger: ATCATGCTCGTCTGCCCTCAAGCTGGAAAACAAGGG...AGGTGGGCATTGAGTGGACTCTGTGCTCACTGGGTGGAGCTGTGGCAGGGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp AACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGGGGAGCTATGGCCGGCCTGCTCTTaGGCACCTGCAGGTGAACTT +
Preference number: 5 (lower is better)
Translates to: NLLTLLPALKASQGTGELWPACS*APAGEL
Trigger: AAGTTCACCTGCAGGTGCCAAAGAGCAGGCCGGCCA...TAGCTCCCCAGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp CTTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACAGGCTTAAGCAAGCGCTaGGGTCCCTGCCACAGACAG +
Preference number: 5 (lower is better)
Translates to: LKQALGSLPQTGRVMLHTGLSKR*GPCHRQ
Trigger: CTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAGCC...TGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS TCA 90 bp ACAGCGCCAGCGCAAACACCAGCAGAATCACAGGGGTCATATATTTaGGGGCCACCCTCCCTGCAGCTGGACAGTCCAGCCCATCAAAGG +
Preference number: 5 (lower is better)
Translates to: TAPAQTPAESQGSYI*GPPSLQLDSPAHQR
Trigger: CCTTTGATGGGCTGGACTGTCCAGCTGCAGGGAGGGTGGCCCTCAAATATATGACCCCTGTGATTCTGCTGGTGTTTGCGCTGGCGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000547260.5
ENST00000550422.5
ENST00000552099.5
CDS CCA 90 bp TTGGAGGGAAGGGTAACCTTTACTCTCTTGCCCACCCAGCCTGCATaGCCCACCACCCTCCACGCATACTCTATCTGCCCTCAAATCCCC +
Preference number: 5 (lower is better)
Translates to: LEGRVTFTLLPTQPA*PTTLHAYSICPQIP
Trigger: GGGGATTTGAGGGCAGATAGAGTATGCGTGGAGGGTGGTGGGCCATGCAGGCTGGGTGGGCAAGAGAGTAAAGGTTACCCTTCCCTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551435.1
CDS-3UTR CAA 90 bp TGCCCCCTGCCACAGCTCCACCCAGTGAGCACAGAGTCCACTCAATGCCCACCTCCATCAAAGGTCTCATaGGAAGAAGCCAAGCCATGG +
Preference number: 5 (lower is better)
Translates to: CPLPQLHPVSTESTQCPPPSKVS*EEAKPW
Trigger: CCATGGCTTGGCTTCTTCCAATGAGACCTTTGATGG...AGGTGGGCATTGAGTGGACTCTGTGCTCACTGGGTGGAGCTGTGGCAGGGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp CCCGAACGGCACTTAGGGATTTGGCACAAAAAGGACTCCTCTCCCTCCTTTTGCCCCTTGCCCTTCACCTaGACCACCCCTCGACACTCC +
Preference number: 5 (lower is better)
Translates to: PERHLGIWHKKDSSPSFCPLPFT*TTPRHS
Trigger: GGAGTGTCGAGGGGTGGTCAAGGTGAAGGGCAAGGG...GCAAAAGGAGGGAGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGTTCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGTCGGTAGGTAGCCCCTaGTTTTCCAGCTTGAGGGCA +
Preference number: 5 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWSVGSP*FSSLRA
Trigger: TGCCCTCAAGCTGGAAAACAAGGGGCTACCTACCGA...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp GGGGAAGTGCCCAGGACCAGTGCTGGGGATGCAGGTATTGCAAAGGCAAGCATGTCGGTAGGTAGCCCCTaGTTTTCCAGCTTGAGGGCA +
Preference number: 5 (lower is better)
Translates to: GEVPRTSAGDAGIAKASMSVGSP*FSSLRA
Trigger: TGCCCTCAAGCTGGAAAACAAGGGGCTACCTACCGA...CATGCTTGCCTTTGCAATACCTGCATCCCCAGCACTGGTCCTGGGCACTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp GGGGAAGTGCCCAGGACCAGTGCTGGGGATGCAGGTATTGCAAAGGCAAGCATGCTGTCAGAGGTCCCTTaGTTCCCCTTTGGGGACAGA +
Preference number: 5 (lower is better)
Translates to: GEVPRTSAGDAGIAKASMLSEVP*FPFGDR
Trigger: TCTGTCCCCAAAGGGGAACAAAGGGACCTCTGACAG...CATGCTTGCCTTTGCAATACCTGCATCCCCAGCACTGGTCCTGGGCACTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp TGCCCCCTGCCACAGCTCCACCCAGTGAGCACAGAGTCCACTCAATGCCCACCTTCCCCACACACAGGCTaGCTCTCTGAGCATTTTTCA +
Preference number: 5 (lower is better)
Translates to: CPLPQLHPVSTESTQCPPSPHTG*LSEHFS
Trigger: TGAAAAATGCTCAGAGAGCAAGCCTGTGTGTGGGGA...AGGTGGGCATTGAGTGGACTCTGTGCTCACTGGGTGGAGCTGTGGCAGGGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS CCA 90 bp AAGAGCCCCCTTCCAGCTGCTGCTATCAGTGTAAGACTGAGGAGCTaGGAAAACAGGCAGCCTAGGACTCCAGGCAGGACTTGGGCATAC +
Preference number: 5 (lower is better)
Translates to: KSPLPAAAISVRLRS*ENRQPRTPGRTWAY
Trigger: GTATGCCCAAGTCCTGCCTGGAGTCCTAGGCTGCCTGTTTTCCCAGCTCCTCAGTCTTACACTGATAGCAGCAGCTGGAAGGGGGCTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547260.5
CDS-3UTR CAA 90 bp TGTCCCAGGACACTATCTGGGGAAGCCAGGAAATTCCTCAGCCTCTGTCCATCATACAGGCGCTCCAGCTaGGCCGAACGGAACTGCTTC +
Preference number: 5 (lower is better)
Translates to: CPRTLSGEARKFLSLCPSYRRSS*AERNCF
Trigger: GAAGCAGTTCCGTTCGGCCAAGCTGGAGCGCCTGTA...TGATGGACAGAGGCTGAGGAATTTCCTGGCTTCCCCAGATAGTGTCCTGGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp TGCCCCCTGCCACAGCTCCACCCAGTGAGCACAGAGTCCACTCAATGCCCACCTATCACCACGGTTAAGTaGCCAGGCCAAGATCAAATG +
Preference number: 5 (lower is better)
Translates to: CPLPQLHPVSTESTQCPPITTVK*PGQDQM
Trigger: CATTTGATCTTGGCCTGGCAACTTAACCGTGGTGAT...AGGTGGGCATTGAGTGGACTCTGTGCTCACTGGGTGGAGCTGTGGCAGGGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp AGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGCATAGCCCTTCCATGGAGTaGGCCCGAGTCCGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: RKFLSLCPSNPRQFKCWHSPSME*ARVRCS
Trigger: GCTGCAGCGGACTCGGGCCAACTCCATGGAAGGGCT...ATGCCAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp CTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTAAGGCCTTGGAGTCCTaGGTCCGGGAGAAGGCACGA +
Preference number: 5 (lower is better)
Translates to: LEFNLLTLLPALKASQGTKALES*VREKAR
Trigger: TCGTGCCTTCTCCCGGACCAAGGACTCCAAGGCCTT...AGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp AACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGGGGAGCTAGTGCCCCGGTTGTCTTaGCTGGAATCATCAATGCCC +
Preference number: 5 (lower is better)
Translates to: NLLTLLPALKASQGTGELVPRLS*LESSMP
Trigger: GGGCATTGATGATTCCAGCAAAGACAACCGGGGCAC...TAGCTCCCCAGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp GGGAATCTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGCTGCGGGACAGACGTaGCAGGGCCTTAGGGAACAG +
Preference number: 5 (lower is better)
Translates to: GNLEFNLLTLLPALKASQAAGQT*QGLREQ
Trigger: CTGTTCCCTAAGGCCCTGCAACGTCTGTCCCGCAGC...TTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAGATTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGCTGCGGGACAGACGTaGCAGGGCCTTAGGGAACAG +
Preference number: 5 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLAAGQT*QGLREQ
Trigger: CTGTTCCCTAAGGCCCTGCAACGTCTGTCCCGCAGC...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp TGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCCGAACGGCACTTAGGCCATCAAAGGTCTCATaGGAAGAAGCCAAGCCATGG +
Preference number: 5 (lower is better)
Translates to: CHRQGESCCTHGPRTALRPSKVS*EEAKPW
Trigger: CCATGGCTTGGCTTCTTCCAATGAGACCTTTGATGG...CCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp AACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGGGGAGCTAACAGGGGTCATATATTaGAGGGCCACCCTCCCTGCA +
Preference number: 5 (lower is better)
Translates to: NLLTLLPALKASQGTGELTGVIY*RATLPA
Trigger: TGCAGGGAGGGTGGCCCTCAAATATATGACCCCTGT...TAGCTCCCCAGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp GGGGAAGTGCCCAGGACCAGTGCTGGGGATGCAGGTATTGCAAAGGCAAGCATGTCCCTTCAGCTGAATTaGTGGCTGGGCCCTGTTAAC +
Preference number: 5 (lower is better)
Translates to: GEVPRTSAGDAGIAKASMSLQLN*WLGPVN
Trigger: GTTAACAGGGCCCAGCCACAAATTCAGCTGAAGGGA...CATGCTTGCCTTTGCAATACCTGCATCCCCAGCACTGGTCCTGGGCACTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGCTGGGATGTTCCCTTTaGTGGTTAGCAGGGTCTGGA +
Preference number: 5 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWLGCSL*WLAGSG
Trigger: TCCAGACCCTGCTAACCACAAAAGGGAACATCCCAG...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp AAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCTTGTTTTCCAGCTaGAGGGCAGACGAGCATGAT +
Preference number: 5 (lower is better)
Translates to: KQALGSLPQTGRVMLHTWPLFSS*RADEHD
Trigger: ATCATGCTCGTCTGCCCTCAAGCTGGAAAACAAGGG...CCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp GGGGAAGTGCCCAGGACCAGTGCTGGGGATGCAGGTATTGCAAAGGCAAGCATGTCCCTTTGTTCCCCTTaGGGGACAGATCATGGGACT +
Preference number: 5 (lower is better)
Translates to: GEVPRTSAGDAGIAKASMSLCSP*GTDHGT
Trigger: AGTCCCATGATCTGTCCCCAAAGGGGAACAAAGGGA...CATGCTTGCCTTTGCAATACCTGCATCCCCAGCACTGGTCCTGGGCACTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS TCA 90 bp CCACCTTCCGGGAGTACTTCTTCTCAAGATCCTCTCTCTGGAAGGTaGGCAGAAACCGGCGCACATGGTCCTTCCGCAGCTGATCAATGC +
Preference number: 5 (lower is better)
Translates to: PPSGSTSSQDPLSGR*AETGAHGPSAADQC
Trigger: GCATTGATCAGCTGCGGAAGGACCATGTGCGCCGGTTTCTGCTCACCTTCCAGAGAGAGGATCTTGAGAAGAAGTACTCCCGGAAGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
ENST00000552090.1
CDS GCA 90 bp AGCTGCAGGAGGTGGCAGAGGCAGACAGTGACCATCTCCTCTGCCTaGCCCCCTAAACACACACACACATTCACACAACTTGCTAGGTTC +
Preference number: 5 (lower is better)
Translates to: SCRRWQRQTVTISSA*PPKHTHTFTQLARF
Trigger: GAACCTAGCAAGTTGTGTGAATGTGTGTGTGTGTTTAGGGGGGCAGGCAGAGGAGATGGTCACTGTCTGCCTCTGCCACCTCCTGCAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548820.1
CDS GCA 90 bp GGAATTGGAGGGAAGGGTAACCTTTACTCTCTTGCCCACCCAGCCTaGATGGCCCACCACCCTCCACGCATACTCTATCTGCCCTCAAAT +
Preference number: 5 (lower is better)
Translates to: GIGGKGNLYSLAHPA*MAHHPPRILYLPSN
Trigger: ATTTGAGGGCAGATAGAGTATGCGTGGAGGGTGGTGGGCCATGCAGGCTGGGTGGGCAAGAGAGTAAAGGTTACCCTTCCCTCCAATTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551435.1
CDS-3UTR CAA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGTACAGGCGCTCCAGCTaGGCCGAACGGAACTGCTTC +
Preference number: 5 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLYRRSS*AERNCF
Trigger: GAAGCAGTTCCGTTCGGCCAAGCTGGAGCGCCTGTA...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp TGTCCCAGGACACTATCTGGGGAAGCCAGGAAATTCCTCAGCCTCTGTCCATCAAGGAACAGCAGCACATaGGCACCGAGCTGCTTCCAG +
Preference number: 5 (lower is better)
Translates to: CPRTLSGEARKFLSLCPSRNSST*APSCFQ
Trigger: CTGGAAGCAGCTCGGTGCCAATGTGCTGCTGTTCCT...TGATGGACAGAGGCTGAGGAATTTCCTGGCTTCCCCAGATAGTGTCCTGGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp GGGAATCTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAAAGGCCTTGGAGTCCTaGGTCCGGGAGAAGGCACGA +
Preference number: 5 (lower is better)
Translates to: GNLEFNLLTLLPALKASQKALES*VREKAR
Trigger: TCGTGCCTTCTCCCGGACCAAGGACTCCAAGGCCTT...TTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAGATTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTATCTGGCGGAAGGCCTaGGAGTCCTTGGTCCGGGAG +
Preference number: 5 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPIWRKA*ESLVRE
Trigger: CTCCCGGACCAAGGACTCCAAGGCCTTCCGCCAGAT...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp CTTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATCTTGGGTGCCCCGGTaGTCTTTGCTGGAATCATCA +
Preference number: 5 (lower is better)
Translates to: LKQALGSLPQTGRVMLHTSWVPR*SLLESS
Trigger: TGATGATTCCAGCAAAGACAACCGGGGCACCCAAGA...TGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp GGGGAAGTGCCCAGGACCAGTGCTGGGGATGCAGGTATTGCAAAGGCAAGCATGCACTCAATGCCCACCTaGGTCCCTTCAGCTGAATTT +
Preference number: 5 (lower is better)
Translates to: GEVPRTSAGDAGIAKASMHSMPT*VPSAEF
Trigger: AAATTCAGCTGAAGGGACCAAGGTGGGCATTGAGTG...CATGCTTGCCTTTGCAATACCTGCATCCCCAGCACTGGTCCTGGGCACTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp AACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGGGGAGCTATCCCTTTGTTCCCCTTaGGGGACAGATCATGGGACT +
Preference number: 5 (lower is better)
Translates to: NLLTLLPALKASQGTGELSLCSP*GTDHGT
Trigger: AGTCCCATGATCTGTCCCCAAAGGGGAACAAAGGGA...TAGCTCCCCAGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGTGGCCGGCCTGCTCTTaGGCACCTGCAGGTGAACTT +
Preference number: 5 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLWPACS*APAGEL
Trigger: AAGTTCACCTGCAGGTGCCAAAGAGCAGGCCGGCCA...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp TGCCCCCTGCCACAGCTCCACCCAGTGAGCACAGAGTCCACTCAATGCCCACCTCTGACCCTTTTCTATTaGGCAACAGAAGAGGAAGAG +
Preference number: 5 (lower is better)
Translates to: CPLPQLHPVSTESTQCPPLTLFY*ATEEEE
Trigger: CTCTTCCTCTTCTGTTGCCAAATAGAAAAGGGTCAG...AGGTGGGCATTGAGTGGACTCTGTGCTCACTGGGTGGAGCTGTGGCAGGGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp GGGGAAGTGCCCAGGACCAGTGCTGGGGATGCAGGTATTGCAAAGGCAAGCATGACGGCACTTAGGGATTaGGCACAAAAAGGACTCCTC +
Preference number: 5 (lower is better)
Translates to: GEVPRTSAGDAGIAKASMTALRD*AQKGLL
Trigger: GAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGT...CATGCTTGCCTTTGCAATACCTGCATCCCCAGCACTGGTCCTGGGCACTTCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp TGCCCCCTGCCACAGCTCCACCCAGTGAGCACAGAGTCCACTCAATGCCCACCTCCGATGAAGTACATGTaGGCAATGGCAGAAGTAAAC +
Preference number: 5 (lower is better)
Translates to: CPLPQLHPVSTESTQCPPPMKYM*AMAEVN
Trigger: GTTTACTTCTGCCATTGCCAACATGTACTTCATCGG...AGGTGGGCATTGAGTGGACTCTGTGCTCACTGGGTGGAGCTGTGGCAGGGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550422.5
CDS-3UTR CAA 90 bp CTTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACAGTCAGGACAAGAAACTaGCCCAAAACCAGGCACAGT +
Preference number: 5 (lower is better)
Translates to: LKQALGSLPQTGRVMLHTVRTRN*PKTRHS
Trigger: ACTGTGCCTGGTTTTGGGCAAGTTTCTTGTCCTGAC...TGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307885.4
CDS-3UTR CAA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTATACAGGCGCTCCAGCTaGGCCGAACGGAACTGCTTC +
Preference number: 5 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLYRRSS*AERNCF
Trigger: GAAGCAGTTCCGTTCGGCCAAGCTGGAGCGCCTGTA...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp AGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGCATAAGGCCTTGGAGTCCTaGGTCCGGGAGAAGGCACGA +
Preference number: 5 (lower is better)
Translates to: RKFLSLCPSNPRQFKCWHKALES*VREKAR
Trigger: TCGTGCCTTCTCCCGGACCAAGGACTCCAAGGCCTT...ATGCCAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp CTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTCCTCCTTCTCCCCTGTaGCCTGTAGTTTCCAGAGGA +
Preference number: 5 (lower is better)
Translates to: LEFNLLTLLPALKASQGTPPSPL*PVVSRG
Trigger: TCCTCTGGAAACTACAGGCAACAGGGGAGAAGGAGG...AGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp CTTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACACACTCAATGCCCACCTaGGTCCCTTCAGCTGAATTT +
Preference number: 5 (lower is better)
Translates to: LKQALGSLPQTGRVMLHTHSMPT*VPSAEF
Trigger: AAATTCAGCTGAAGGGACCAAGGTGGGCATTGAGTG...TGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp AACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTGGGGAGCTACTGGGGATGCAGGTATaGCAAAGGCAAGCATGGAAT +
Preference number: 5 (lower is better)
Translates to: NLLTLLPALKASQGTGELLGMQV*QRQAWN
Trigger: ATTCCATGCTTGCCTTTGCAATACCTGCATCCCCAG...TAGCTCCCCAGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp CTTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACATCCCCACACACAGGCTaGCTCTCTGAGCATTTTTCA +
Preference number: 5 (lower is better)
Translates to: LKQALGSLPQTGRVMLHTSPHTG*LSEHFS
Trigger: TGAAAAATGCTCAGAGAGCAAGCCTGTGTGTGGGGA...TGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp TGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCCGAACGGCACTTAGGCTGACCCTTTTCTATTaGGCAACAGAAGAGGAAGAG +
Preference number: 5 (lower is better)
Translates to: CHRQGESCCTHGPRTALRLTLFY*ATEEEE
Trigger: CTCTTCCTCTTCTGTTGCCAAATAGAAAAGGGTCAG...CCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTAGGCTTAAGCAAGCGCTaGGGTCCCTGCCACAGACAG +
Preference number: 5 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLGLSKR*GPCHRQ
Trigger: CTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAGCC...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS CCA 90 bp ATATGTCCTTTTCTCCGCTGTACTCCCAGTGTCCAGGACAGTGCTTaGCACAGAGCAGAGGTGGGAGAATTCCCACTGGACCCTTACCAT +
Preference number: 5 (lower is better)
Translates to: ICPFLRCTPSVQDSA*HRAEVGEFPLDPYH
Trigger: ATGGTAAGGGTCCAGTGGGAATTCTCCCACCTCTGCTCTGTGCCAAGCACTGTCCTGGACACTGGGAGTACAGCGGAGAAAAGGACATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547260.5
CDS-3UTR CAA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTAGAACGCTTCTGCCCATaGCGTTCACCCCAGGCTGTT +
Preference number: 5 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLERFCP*RSPQAV
Trigger: AACAGCCTGGGGTGAACGCAATGGGCAGAAGCGTTC...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp CTTAAGCAAGCGCTTGGGTCCCTGCCACAGACAGGGAGAGTCATGCTGCACACAATCACCACGGTTAAGTaGCCAGGCCAAGATCAAATG +
Preference number: 5 (lower is better)
Translates to: LKQALGSLPQTGRVMLHTITTVK*PGQDQM
Trigger: CATTTGATCTTGGCCTGGCAACTTAACCGTGGTGAT...TGTGTGCAGCATGACTCTCCCTGTCTGTGGCAGGGACCCAAGCGCTTGCTTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTAAGGAACAGCAGCACATaGGCACCGAGCTGCTTCCAG +
Preference number: 5 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLRNSST*APSCFQ
Trigger: CTGGAAGCAGCTCGGTGCCAATGTGCTGCTGTTCCT...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGTGCCCCGGTTGTCTTaGCTGGAATCATCAATGCCC +
Preference number: 5 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLVPRLS*LESSMP
Trigger: GGGCATTGATGATTCCAGCAAAGACAACCGGGGCAC...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp CTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTTCTTGGGTGCCCCGGTaGTCTTTGCTGGAATCATCA +
Preference number: 5 (lower is better)
Translates to: LEFNLLTLLPALKASQGTSWVPR*SLLESS
Trigger: TGATGATTCCAGCAAAGACAACCGGGGCACCCAAGA...AGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp GGGAATCTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAACCTCCTTCTCCCCTGTaGCCTGTAGTTTCCAGAGGA +
Preference number: 5 (lower is better)
Translates to: GNLEFNLLTLLPALKASQPPSPL*PVVSRG
Trigger: TCCTCTGGAAACTACAGGCAACAGGGGAGAAGGAGG...TTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAGATTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp CCCGAACGGCACTTAGGGATTTGGCACAAAAAGGACTCCTCTCCCTCCTTTTGCCCCTTGTTTTCCAGCTaGAGGGCAGACGAGCATGAT +
Preference number: 5 (lower is better)
Translates to: PERHLGIWHKKDSSPSFCPLFSS*RADEHD
Trigger: ATCATGCTCGTCTGCCCTCAAGCTGGAAAACAAGGG...GCAAAAGGAGGGAGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGTTCGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp TGCCACAGACAGGGAGAGTCATGCTGCACACATGGCCCCCGAACGGCACTTAGGAAGAAAGAAAGTCACTaGCATAATCCTCTCGGTAGG +
Preference number: 5 (lower is better)
Translates to: CHRQGESCCTHGPRTALRKKESH*HNPLGR
Trigger: CCTACCGAGAGGATTATGCAAGTGACTTTCTTTCTT...CCTAAGTGCCGTTCGGGGGCCATGTGTGCAGCATGACTCTCCCTGTCTGTGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp CCCGAACGGCACTTAGGGATTTGGCACAAAAAGGACTCCTCTCCCTCCTTTTGCTCCCTTTGTTCCCCTTaGGGGACAGATCATGGGACT +
Preference number: 5 (lower is better)
Translates to: PERHLGIWHKKDSSPSFCSLCSP*GTDHGT
Trigger: AGTCCCATGATCTGTCCCCAAAGGGGAACAAAGGGA...GCAAAAGGAGGGAGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGTTCGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGATGCTCCATGCCCCCTaGTCAGCAGACAGCAAGAGA +
Preference number: 5 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLMLHAP*SADSKR
Trigger: TCTCTTGCTGTCTGCTGACAAGGGGGCATGGAGCAT...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp AGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGCATCCCAACACCAGAGACTaGGGAGGGCAGGTTTGGGAT +
Preference number: 5 (lower is better)
Translates to: RKFLSLCPSNPRQFKCWHPNTRD*GGQVWD
Trigger: ATCCCAAACCTGCCCTCCCAAGTCTCTGGTGTTGGG...ATGCCAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS CCA 90 bp GGTTCTGTCCACAGACTATTGCCTTCTTCTTCAGTGACATCCACCTaGTACCTATCCTATCCCCCTACAGATCAAGTCCTCCCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: GSVHRLLPSSSVTST*YLSYPPTDQVLPCS
Trigger: GGAGCAGGGGAGGACTTGATCTGTAGGGGGATAGGATAGGTACCAGGTGGATGTCACTGAAGAAGAAGGCAATAGTCTGTGGACAGAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547260.5
ENST00000552099.5
CDS-3UTR CAA 90 bp AGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGCATCAGATGCCAATGACGTaGGTGCAGAGGAACAGCAGC +
Preference number: 5 (lower is better)
Translates to: RKFLSLCPSNPRQFKCWHQMPMT*VQRNSS
Trigger: GCTGCTGTTCCTCTGCACCAACGTCATTGGCATCTG...ATGCCAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTACAGATGCCAATGACGTaGGTGCAGAGGAACAGCAGC +
Preference number: 5 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLQMPMT*VQRNSS
Trigger: GCTGCTGTTCCTCTGCACCAACGTCATTGGCATCTG...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp CTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTCCATCAAAGGTCTCATaGGAAGAAGCCAAGCCATGG +
Preference number: 5 (lower is better)
Translates to: LEFNLLTLLPALKASQGTPSKVS*EEAKPW
Trigger: CCATGGCTTGGCTTCTTCCAATGAGACCTTTGATGG...AGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTCCTCCTTCTCCCCTGTaGCCTGTAGTTTCCAGAGGA +
Preference number: 5 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPPPSPL*PVVSRG
Trigger: TCCTCTGGAAACTACAGGCAACAGGGGAGAAGGAGG...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp CCCGAACGGCACTTAGGGATTTGGCACAAAAAGGACTCCTCTCCCTCCTTTTGCCACTCAATGCCCACCTaGGTCCCTTCAGCTGAATTT +
Preference number: 5 (lower is better)
Translates to: PERHLGIWHKKDSSPSFCHSMPT*VPSAEF
Trigger: AAATTCAGCTGAAGGGACCAAGGTGGGCATTGAGTG...GCAAAAGGAGGGAGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGTTCGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp GGGAATCTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAACTGGGATGTTCCCTTTaGTGGTTAGCAGGGTCTGGA +
Preference number: 5 (lower is better)
Translates to: GNLEFNLLTLLPALKASQLGCSL*WLAGSG
Trigger: TCCAGACCCTGCTAACCACAAAAGGGAACATCCCAG...TTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAGATTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTATCGGTAGGTAGCCCCTaGTTTTCCAGCTTGAGGGCA +
Preference number: 5 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLSVGSP*FSSLRA
Trigger: TGCCCTCAAGCTGGAAAACAAGGGGCTACCTACCGA...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTACCAAAGGCTGGAAGATaGGAGAGGGAACAGCCCTAC +
Preference number: 5 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLPKAGR*EREQPY
Trigger: GTAGGGCTGTTCCCTCTCCAATCTTCCAGCCTTTGG...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTACTGTCAGAGGTCCCTTaGTTCCCCTTTGGGGACAGA +
Preference number: 5 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLLSEVP*FPFGDR
Trigger: TCTGTCCCCAAAGGGGAACAAAGGGACCTCTGACAG...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp CCCGAACGGCACTTAGGGATTTGGCACAAAAAGGACTCCTCTCCCTCCTTTTGCACGGCACTTAGGGATTaGGCACAAAAAGGACTCCTC +
Preference number: 5 (lower is better)
Translates to: PERHLGIWHKKDSSPSFCTALRD*AQKGLL
Trigger: GAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGT...GCAAAAGGAGGGAGAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGTTCGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp CTAGAGTTCAACCTCCTAACCCTTCTGCCAGCCCTCAAGGCTTCACAAGGGACTATCACCACGGTTAAGTaGCCAGGCCAAGATCAAATG +
Preference number: 5 (lower is better)
Translates to: LEFNLLTLLPALKASQGTITTVK*PGQDQM
Trigger: CATTTGATCTTGGCCTGGCAACTTAACCGTGGTGAT...AGTCCCTTGTGAAGCCTTGAGGGCTGGCAGAAGGGTTAGGAGGTTGAACTCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTATCCCTTCAGCTGAATTaGTGGCTGGGCCCTGTTAAC +
Preference number: 5 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLSLQLN*WLGPVN
Trigger: GTTAACAGGGCCCAGCCACAAATTCAGCTGAAGGGA...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp AGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGGCATCTGGGATGTTCCCTTTaGTGGTTAGCAGGGTCTGGA +
Preference number: 5 (lower is better)
Translates to: RKFLSLCPSNPRQFKCWHLGCSL*WLAGSG
Trigger: TCCAGACCCTGCTAACCACAAAAGGGAACATCCCAG...ATGCCAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGCTGGGGATGCAGGTATaGCAAAGGCAAGCATGGAAT +
Preference number: 5 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLLGMQV*QRQAWN
Trigger: ATTCCATGCTTGCCTTTGCAATACCTGCATCCCCAG...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS TCA 90 bp CTCCAATCCTTACCTTTTGGGATACTGAGTCCCAGAGTGAGCAAGTaGCTTCCCTCCAGAACAGTGAACAGCCCATTCCTGATCTGGATG +
Preference number: 5 (lower is better)
Translates to: LQSLPFGILSPRVSK*LPSRTVNSPFLIWM
Trigger: CATCCAGATCAGGAATGGGCTGTTCACTGTTCTGGAGGGAAGTCACTTGCTCACTCTGGGACTCAGTATCCCAAAAGGTAAGGATTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547260.5
CDS-3UTR CAA 90 bp ATTTGGTTGATGCATGAAGATGCCCAAGGGAGGCATTACCCAGAAACCAGGCCTACGGCACTTAGGGATTaGGCACAAAAAGGACTCCTC +
Preference number: 5 (lower is better)
Translates to: IWLMHEDAQGRHYPETRPTALRD*AQKGLL
Trigger: GAGGAGTCCTTTTTGTGCCAAATCCCTAAGTGCCGT...AGGCCTGGTTTCTGGGTAATGCCTCCCTTGGGCATCTTCATGCATCAACCAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS TCA 90 bp TGGTCTCATGAGGTTCTGTCCACAGACTATTGCCTTCTTCTTCAGTaGCATCCACCTGGTACCTATCCTATCCCCCTACAGATCAAGTCC +
Preference number: 5 (lower is better)
Translates to: WSHEVLSTDYCLLLQ*HPPGTYPIPLQIKS
Trigger: GGACTTGATCTGTAGGGGGATAGGATAGGTACCAGGTGGATGTCACTGAAGAAGAAGGCAATAGTCTGTGGACAGAACCTCATGAGACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000547260.5
ENST00000552099.5
CDS CCA 90 bp TTATACCCCATGGGCCTTAGTACTCACTCAGGGATGACAAGAGGTTaGGAGAACAAGGAAGGAGAACCGGAGTTAACCTTCCCCTATTCT +
Preference number: 5 (lower is better)
Translates to: LYPMGLSTHSGMTRG*ENKEGEPELTFPYS
Trigger: AGAATAGGGGAAGGTTAACTCCGGTTCTCCTTCCTTGTTCTCCCAACCTCTTGTCATCCCTGAGTGAGTACTAAGGCCCATGGGGTATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547260.5
CDS-3UTR CAA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTACTAAACCATGACATGTaGCTGGTAGGGAAGGAAGGA +
Preference number: 5 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLLNHDM*LVGKEG
Trigger: TCCTTCCTTCCCTACCAGCAACATGTCATGGTTTAG...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307885.4
CDS-3UTR CAA 90 bp AAAGGCAAGCATGGAATAGGCACTCCTCATGCCTGTCTTTGTACAAAATATTGTTGCAGCAGCCTCCGGTaGTATGCCTGTAGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: KGKHGIGTPHACLCTKYCCSSLR*YACSSS
Trigger: GGAGGAGCTACAGGCATACAACCGGAGGCTGCTGCA...ACAATATTTTGTACAAAGACAGGCATGAGGAGTGCCTATTCCATGCTTGCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp AAAGGCAAGCATGGAATAGGCACTCCTCATGCCTGTCTTTGTACAAAATATTGTTGGGCCGCCACGTCCTaGGGCAGAATGTTATGCAGC +
Preference number: 5 (lower is better)
Translates to: KGKHGIGTPHACLCTKYCWAATS*GRMLCS
Trigger: GCTGCATAACATTCTGCCCAAGGACGTGGCGGCCCA...ACAATATTTTGTACAAAGACAGGCATGAGGAGTGCCTATTCCATGCTTGCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp AAGTTTAAGGTTCCTCTTCCCCACCCCGTAGTACCAGTATCCAGGTCCTCAGAGCTGACCCTTTTCTATTaGGCAACAGAAGAGGAAGAG +
Preference number: 5 (lower is better)
Translates to: KFKVPLPHPVVPVSRSSELTLFY*ATEEEE
Trigger: CTCTTCCTCTTCTGTTGCCAAATAGAAAAGGGTCAG...CTCTGAGGACCTGGATACTGGTACTACGGGGTGGGGAAGAGGAACCTTAAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp AAAGGCAAGCATGGAATAGGCACTCCTCATGCCTGTCTTTGTACAAAATATTGTAGGGTTCAGGGCATCTaGGGTGCCCCGGTTGTCTTT +
Preference number: 5 (lower is better)
Translates to: KGKHGIGTPHACLCTKYCRVQGI*GAPVVF
Trigger: AAAGACAACCGGGGCACCCAAGATGCCCTGAACCCT...ACAATATTTTGTACAAAGACAGGCATGAGGAGTGCCTATTCCATGCTTGCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp AAGTTTAAGGTTCCTCTTCCCCACCCCGTAGTACCAGTATCCAGGTCCTCAGAGTTACAGGTGAACATGTaGGCAATGGCAGAAGTAAAC +
Preference number: 5 (lower is better)
Translates to: KFKVPLPHPVVPVSRSSELQVNM*AMAEVN
Trigger: GTTTACTTCTGCCATTGCCAACATGTTCACCTGTAA...CTCTGAGGACCTGGATACTGGTACTACGGGGTGGGGAAGAGGAACCTTAAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307885.4
ENST00000357869.8
CDS-3UTR CAA 90 bp AGCCAGGAAATTCCTCAGCCTCTGTCCATCAAACCCCAGACAGTTCAAGTGCTGAAGAAAGAAAGTCACTaGCATAATCCTCTCGGTAGG +
Preference number: 5 (lower is better)
Translates to: SQEIPQPLSIKPQTVQVLKKESH*HNPLGR
Trigger: CCTACCGAGAGGATTATGCAAGTGACTTTCTTTCTT...CAGCACTTGAACTGTCTGGGGTTTGATGGACAGAGGCTGAGGAATTTCCTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp AAAGGCAAGCATGGAATAGGCACTCCTCATGCCTGTCTTTGTACAAAATATTGTGTGCCCCGGTTGTCTTaGCTGGAATCATCAATGCCC +
Preference number: 5 (lower is better)
Translates to: KGKHGIGTPHACLCTKYCVPRLS*LESSMP
Trigger: GGGCATTGATGATTCCAGCAAAGACAACCGGGGCAC...ACAATATTTTGTACAAAGACAGGCATGAGGAGTGCCTATTCCATGCTTGCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp CTGATCTACTTATACCCTCACCCCTACCCCATGGCACCAAGTAGTCTCTTCCTATTACAGGTGAACATGTaGGCAATGGCAGAAGTAAAC +
Preference number: 5 (lower is better)
Translates to: LIYLYPHPYPMAPSSLFLLQVNM*AMAEVN
Trigger: GTTTACTTCTGCCATTGCCAACATGTTCACCTGTAA...TAGGAAGAGACTACTTGGTGCCATGGGGTAGGGGTGAGGGTATAAGTAGATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307885.4
ENST00000357869.8
CDS-3UTR CAA 90 bp AAAGGCAAGCATGGAATAGGCACTCCTCATGCCTGTCTTTGTACAAAATATTGTACAGGGGTCATATATTaGAGGGCCACCCTCCCTGCA +
Preference number: 5 (lower is better)
Translates to: KGKHGIGTPHACLCTKYCTGVIY*RATLPA
Trigger: TGCAGGGAGGGTGGCCCTCAAATATATGACCCCTGT...ACAATATTTTGTACAAAGACAGGCATGAGGAGTGCCTATTCCATGCTTGCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp AAAGGCAAGCATGGAATAGGCACTCCTCATGCCTGTCTTTGTACAAAATATTGTCCAAAGGCTGGAAGATaGGAGAGGGAACAGCCCTAC +
Preference number: 5 (lower is better)
Translates to: KGKHGIGTPHACLCTKYCPKAGR*EREQPY
Trigger: GTAGGGCTGTTCCCTCTCCAATCTTCCAGCCTTTGG...ACAATATTTTGTACAAAGACAGGCATGAGGAGTGCCTATTCCATGCTTGCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp AAAGGCAAGCATGGAATAGGCACTCCTCATGCCTGTCTTTGTACAAAATATTGTATGCTCCATGCCCCCTaGTCAGCAGACAGCAAGAGA +
Preference number: 5 (lower is better)
Translates to: KGKHGIGTPHACLCTKYCMLHAP*SADSKR
Trigger: TCTCTTGCTGTCTGCTGACAAGGGGGCATGGAGCAT...ACAATATTTTGTACAAAGACAGGCATGAGGAGTGCCTATTCCATGCTTGCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS TCA 90 bp CAGCCACTGCCACCACTAGTAGCTCATTACCTAAGCACTTCCCACTaGCAAGCTATGAGTTTCATCCTCATAAAATTACTTGGAGGTAGG +
Preference number: 5 (lower is better)
Translates to: QPLPPLVAHYLSTSH*QAMSFILIKLLGGR
Trigger: CCTACCTCCAAGTAATTTTATGAGGATGAAACTCATAGCTTGTCAGTGGGAAGTGCTTAGGTAATGAGCTACTAGTGGTGGCAGTGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307885.4
CDS-3UTR CAA 90 bp AAAGGCAAGCATGGAATAGGCACTCCTCATGCCTGTCTTTGTACAAAATATTGTTCCCTTCAGCTGAATTaGTGGCTGGGCCCTGTTAAC +
Preference number: 5 (lower is better)
Translates to: KGKHGIGTPHACLCTKYCSLQLN*WLGPVN
Trigger: GTTAACAGGGCCCAGCCACAAATTCAGCTGAAGGGA...ACAATATTTTGTACAAAGACAGGCATGAGGAGTGCCTATTCCATGCTTGCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS-3UTR CAA 90 bp AAAGGCAAGCATGGAATAGGCACTCCTCATGCCTGTCTTTGTACAAAATATTGTCTGGGGATGCAGGTATaGCAAAGGCAAGCATGGAAT +
Preference number: 5 (lower is better)
Translates to: KGKHGIGTPHACLCTKYCLGMQV*QRQAWN
Trigger: ATTCCATGCTTGCCTTTGCAATACCTGCATCCCCAG...ACAATATTTTGTACAAAGACAGGCATGAGGAGTGCCTATTCCATGCTTGCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS TCA 90 bp TTCAATTTTCTCTATTCAGAGGACCATCTTGCTTGGTTGGTCTCATaGGGTTCTGTCCACAGACTATTGCCTTCTTCTTCAGTGACATCC +
Preference number: 5 (lower is better)
Translates to: FNFLYSEDHLAWLVS*GSVHRLLPSSSVTS
Trigger: GGATGTCACTGAAGAAGAAGGCAATAGTCTGTGGACAGAACCTCATGAGACCAACCAAGCAAGATGGTCCTCTGAATAGAGAAAATTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547260.5
ENST00000552099.5
CDS GCA 90 bp CTACCTCACATTTTGCTTCAATTTTCTCTATTCAGAGGACCATCTTaGTTGGTTGGTCTCATGAGGTTCTGTCCACAGACTATTGCCTTC +
Preference number: 5 (lower is better)
Translates to: LPHILLQFSLFRGPS*LVGLMRFCPQTIAF
Trigger: GAAGGCAATAGTCTGTGGACAGAACCTCATGAGACCAACCAAGCAAGATGGTCCTCTGAATAGAGAAAATTGAAGCAAAATGTGAGGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547260.5
ENST00000552099.5
CDS CCA 90 bp CATTTTGCTTCAATTTTCTCTATTCAGAGGACCATCTTGCTTGGTTaGTCTCATGAGGTTCTGTCCACAGACTATTGCCTTCTTCTTCAG +
Preference number: 5 (lower is better)
Translates to: HFASIFSIQRTILLG*SHEVLSTDYCLLLQ
Trigger: CTGAAGAAGAAGGCAATAGTCTGTGGACAGAACCTCATGAGACCAACCAAGCAAGATGGTCCTCTGAATAGAGAAAATTGAAGCAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547260.5
ENST00000552099.5
CDS CCA 72 bp CCTGCACCAGACGGCGCCAGCAGGATCGCCCACTCCTaGGCACCGCGTCGGGCGCCACCTCAGCCGTCCCGC +
Preference number: 6 (lower is better)
Translates to: PAPDGASRIAHS*APRRAPPQPSR
Trigger: GCGGGACGGCTGAGGTGGCGCCCGACGCGGTGCCCAGGAGTGGGCGATCCTGCTGGCGCCGTCTGGTGCAGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS GCA 72 bp GCACCAGAGGCCCGCAGAGGGGCTGCGCGGGTCTGCTaGGAGAGCGCCCCCGACCTGCACTGCCGCCAGGAT +
Preference number: 6 (lower is better)
Translates to: APEARRGAARVC*ESAPDLHCRQD
Trigger: ATCCTGGCGGCAGTGCAGGTCGGGGGCGCTCTCGCAGCAGACCCGCGCAGCCCCTCTGCGGGCCTCTGGTGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS GCA 72 bp GCGCGGGTCTGCTGCGAGAGCGCCCCCGACCTGCACTaGCGCCAGGATGCCCAGCACCACGTAGCTCACCAC +
Preference number: 6 (lower is better)
Translates to: ARVCCESAPDLH*RQDAQHHVAHH
Trigger: GTGGTGAGCTACGTGGTGCTGGGCATCCTGGCGGCAGTGCAGGTCGGGGGCGCTCTCGCAGCAGACCCGCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS TCA 72 bp GGGCGGGTGCGGCGTGGAAAGCCAGCAGCACCGCTGTaGGCAGCACCAGCACCGCCATCAGCAGCGTCAGGC +
Preference number: 6 (lower is better)
Translates to: GRVRRGKPAAPL*AAPAPPSAASG
Trigger: GCCTGACGCTGCTGATGGCGGTGCTGGTGCTGCTCACAGCGGTGCTGCTGGCTTTCCACGCCGCACCCGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS GCA 72 bp GCTCTGCATCCCGGAGGCAGCTCATATAGCGGGGCGTaGAGAAGCCACCTGCCCGAGTGCCACGGCGCCGCG +
Preference number: 6 (lower is better)
Translates to: ALHPGGSSYSGA*RSHLPECHGAA
Trigger: CGCGGCGCCGTGGCACTCGGGCAGGTGGCTTCTGCACGCCCCGCTATATGAGCTGCCTCCGGGATGCAGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS CAA 90 bp TCGGTATCCTCGAAGCCCAGGGCCACTGCCCGCAGCCCCAGCTCCTaGCCCTTGCCTGGGCCGCCCCTCCGGATGAAGGCGTCATCCTGC +
Preference number: 6 (lower is better)
Translates to: SVSSKPRATARSPSS*PLPGPPLRMKASSC
Trigger: GCAGGATGACGCCTTCATCCGGAGGGGCGGCCCAGGCAAGGGCAAGGAGCTGGGGCTGCGGGCAGTGGCCCTGGGCTTCGAGGATACCGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS GCA 72 bp GAGGCAGCTCATATAGCGGGGCGTGCAGAAGCCACCTaGCCGAGTGCCACGGCGCCGCGAACGCTTCTGCCC +
Preference number: 6 (lower is better)
Translates to: EAAHIAGRAEAT*PSATAPRTLLP
Trigger: GGGCAGAAGCGTTCGCGGCGCCGTGGCACTCGGGCAGGTGGCTTCTGCACGCCCCGCTATATGAGCTGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS GCA 72 bp CTGCGAGAGCGCCCCCGACCTGCACTGCCGCCAGGATaGCCAGCACCACGTAGCTCACCACCCACATGGAGT +
Preference number: 6 (lower is better)
Translates to: LRERPRPALPPG*PAPRSSPPTWS
Trigger: ACTCCATGTGGGTGGTGAGCTACGTGGTGCTGGGCATCCTGGCGGCAGTGCAGGTCGGGGGCGCTCTCGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS CCA 72 bp CAGGAACCCAGCGCGGCATCAGCCCTTCCATGGAGTTaGCCCGAGTCCGCTGCAGCTTGGCCAGCATGGCCT +
Preference number: 6 (lower is better)
Translates to: QEPSAASALPWS*PESAAAWPAWP
Trigger: AGGCCATGCTGGCCAAGCTGCAGCGGACTCGGGCCAACTCCATGGAAGGGCTGATGCCGCGCTGGGTTCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
ENST00000552090.1
CDS CAA 72 bp TCAGGAACCCAGCGCGGCATCAGCCCTTCCATGGAGTaGGCCCGAGTCCGCTGCAGCTTGGCCAGCATGGCC +
Preference number: 6 (lower is better)
Translates to: SGTQRGISPSME*ARVRCSLASMA
Trigger: GGCCATGCTGGCCAAGCTGCAGCGGACTCGGGCCAACTCCATGGAAGGGCTGATGCCGCGCTGGGTTCCTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
ENST00000552090.1
CDS CAA 90 bp CGCGGCATCAGCCCTTCCATGGAGTTGGCCCGAGTCCGCTGCAGCTaGGCCAGCATGGCCTTCTCCTCTTTCCGTTTCTGGCTGGCGCCC +
Preference number: 6 (lower is better)
Translates to: RGISPSMELARVRCS*ASMAFSSFRFWLAP
Trigger: GGGCGCCAGCCAGAAACGGAAAGAGGAGAAGGCCATGCTGGCCAAGCTGCAGCGGACTCGGGCCAACTCCATGGAAGGGCTGATGCCGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
ENST00000552090.1
CDS GCA 72 bp CCACCTGCCCGAGTGCCACGGCGCCGCGAACGCTTCTaGCCATTGCGTTCACCCCAGGCTGTTTTCCGTTCA +
Preference number: 6 (lower is better)
Translates to: PPARVPRRRERF*PLRSPQAVFRS
Trigger: TGAACGGAAAACAGCCTGGGGTGAACGCAATGGGCAGAAGCGTTCGCGGCGCCGTGGCACTCGGGCAGGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS CCA 72 bp AGGCGCTCCAGCTTGGCCGAACGGAACTGCTTCGACTaGAACACCTGCACCAGACGGCGCCAGCAGGATCGC +
Preference number: 6 (lower is better)
Translates to: RRSSLAERNCFD*NTCTRRRQQDR
Trigger: GCGATCCTGCTGGCGCCGTCTGGTGCAGGTGTTCCAGTCGAAGCAGTTCCGTTCGGCCAAGCTGGAGCGCCT
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS CCA 72 bp CACGATCAGGAACCCAGCGCGGCATCAGCCCTTCCATaGAGTTGGCCCGAGTCCGCTGCAGCTTGGCCAGCA +
Preference number: 6 (lower is better)
Translates to: HDQEPSAASALP*SWPESAAAWPA
Trigger: TGCTGGCCAAGCTGCAGCGGACTCGGGCCAACTCCATGGAAGGGCTGATGCCGCGCTGGGTTCCTGATCGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
ENST00000552090.1
CDS CCA 72 bp GTGAGTTCCTGGGTCCCCAGCGCCCATCACCAGGCCTaGCACAGAAGGGCCAATGTCTGTGCCAGGACAGCC +
Preference number: 6 (lower is better)
Translates to: VSSWVPSAHHQA*HRRANVCARTA
Trigger: GGCTGTCCTGGCACAGACATTGGCCCTTCTGTGCCAGGCCTGGTGATGGGCGCTGGGGACCCAGGAACTCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552099.5
CDS TCA 72 bp AGTCCTGGCGGAAGCTATGCCGGTTACACACCACCATaGGCCCCACGAACAGGGCGGCGGCACAGGCCAACA +
Preference number: 6 (lower is better)
Translates to: SPGGSYAGYTPP*APRTGRRHRPT
Trigger: TGTTGGCCTGTGCCGCCGCCCTGTTCGTGGGGCTCATGGTGGTGTGTAACCGGCATAGCTTCCGCCAGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS GCA 72 bp AGCTTGGCCGAACGGAACTGCTTCGACTGGAACACCTaGACCAGACGGCGCCAGCAGGATCGCCCACTCCTG +
Preference number: 6 (lower is better)
Translates to: SLAERNCFDWNT*TRRRQQDRPLL
Trigger: CAGGAGTGGGCGATCCTGCTGGCGCCGTCTGGTGCAGGTGTTCCAGTCGAAGCAGTTCCGTTCGGCCAAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307885.4
ENST00000357869.8
ENST00000550422.5
CDS CAA 72 bp GCCCGAGTGCCACGGCGCCGCGAACGCTTCTGCCCATaGCGTTCACCCCAGGCTGTTTTCCGTTCATCCACT +
Preference number: 6 (lower is better)
Translates to: ARVPRRRERFCP*RSPQAVFRSST
Trigger: AGTGGATGAACGGAAAACAGCCTGGGGTGAACGCAATGGGCAGAAGCGTTCGCGGCGCCGTGGCACTCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307885.4