RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADCY5 (Homo sapiens)

Ensembl gene IDs: ENSG00000173175

Ensembl transcript IDs: ENST00000309879.9, ENST00000462833.6, ENST00000466617.5, ENST00000468683.1, ENST00000470367.1, ENST00000474577.5, ENST00000476455.1, ENST00000478092.1, ENST00000483566.1, ENST00000491190.5

Found 613 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCTTTGGTCAGCTGGGTGCTCGCAGGACGCTGGCACCCCGGGGCCTaGGACAGAGGCCGCTGCCCACCAGCAAAGGCAGAAGCTGCTCTG +
Preference number: 1 (lower is better)
Translates to: SLVSWVLAGRWHPGA*DRGRCPPAKAEAAL
Trigger: CAGAGCAGCTTCTGCCTTTGCTGGTGGGCAGCGGCCTCTGTCCCAGGCCCCGGGGTGCCAGCGTCCTGCGAGCACCCAGCTGACCAAAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
3UTR GCA 90 bp GTGCTCGCAGGACGCTGGCACCCCGGGGCCTGGGACAGAGGCCGCTaGCCACCAGCAAAGGCAGAAGCTGCTCTGGAGTCCAAGTGGAAA +
Preference number: 1 (lower is better)
Translates to: VLAGRWHPGAWDRGR*PPAKAEAALESKWK
Trigger: TTTCCACTTGGACTCCAGAGCAGCTTCTGCCTTTGCTGGTGGGCAGCGGCCTCTGTCCCAGGCCCCGGGGTGCCAGCGTCCTGCGAGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
3UTR CCA 90 bp CCTGGGACAGAGGCCGCTGCCCACCAGCAAAGGCAGAAGCTGCTCTaGAGTCCAAGTGGAAAATCTCAGCAGCGCAGCCCTGCGGGCTGG +
Preference number: 1 (lower is better)
Translates to: PGTEAAAHQQRQKLL*SPSGKSQQRSPAGW
Trigger: CCAGCCCGCAGGGCTGCGCTGCTGAGATTTTCCACTTGGACTCCAGAGCAGCTTCTGCCTTTGCTGGTGGGCAGCGGCCTCTGTCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
3UTR GCA 90 bp TCTAGCAGAGTCTTCTACAGAGGGAAACATCTTTGGTCAGCTGGGTaGTCGCAGGACGCTGGCACCCCGGGGCCTGGGACAGAGGCCGCT +
Preference number: 1 (lower is better)
Translates to: SSRVFYRGKHLWSAG*SQDAGTPGPGTEAA
Trigger: AGCGGCCTCTGTCCCAGGCCCCGGGGTGCCAGCGTCCTGCGAGCACCCAGCTGACCAAAGATGTTTCCCTCTGTAGAAGACTCTGCTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
3UTR CCA 90 bp CTTCAGACCCAGTCTAGCAGAGTCTTCTACAGAGGGAAACATCTTTaGTCAGCTGGGTGCTCGCAGGACGCTGGCACCCCGGGGCCTGGG +
Preference number: 1 (lower is better)
Translates to: LQTQSSRVFYRGKHL*SAGCSQDAGTPGPG
Trigger: CCCAGGCCCCGGGGTGCCAGCGTCCTGCGAGCACCCAGCTGACCAAAGATGTTTCCCTCTGTAGAAGACTCTGCTAGACTGGGTCTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
3UTR CCA 90 bp GGGGAGGGGAGGGTGGTGCTAGAGCCCAGTGAGAGGTGGTACAGGTaGACATCAAAGTCACATTGTGGCAGCTGGCACAGAGCCACTGCC +
Preference number: 1 (lower is better)
Translates to: GEGRVVLEPSERWYR*TSKSHCGSWHRATA
Trigger: GGCAGTGGCTCTGTGCCAGCTGCCACAATGTGACTTTGATGTCCACCTGTACCACCTCTCACTGGGCTCTAGCACCACCCTCCCCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR TCA 90 bp GAAAACCCAACACCACTGGCGGGCGATGTGGAGGGGCAGGGAACTTaGGAACAACAGCTGGAAGAAAGCAGGCCTCCTGTGGCCGACGTC +
Preference number: 1 (lower is better)
Translates to: ENPTPLAGDVEGQGT*EQQLEESRPPVADV
Trigger: GACGTCGGCCACAGGAGGCCTGCTTTCTTCCAGCTGTTGTTCTCAAGTTCCCTGCCCCTCCACATCGCCCGCCAGTGGTGTTGGGTTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR GCA 90 bp AGGACCACGATGAAGGCCACAGTCCCTCCAAAGCCAGCACTCCTGTaGCAAAGCCCCTGCAGGTGCAGGGTGGTGGCCTGTCTGAAGTTT +
Preference number: 1 (lower is better)
Translates to: RTTMKATVPPKPALL*QSPCRCRVVACLKF
Trigger: AAACTTCAGACAGGCCACCACCCTGCACCTGCAGGGGCTTTGGCACAGGAGTGCTGGCTTTGGAGGGACTGTGGCCTTCATCGTGGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
3UTR TCA 90 bp CTGAAATCTCAGGGTGTGGAGGGCACCACACTGCCTGTCGCAGGATaGGATTGCTTCCCTTGGTTCCAGCTCGGCCTGGGATGGGAAAGC +
Preference number: 1 (lower is better)
Translates to: LKSQGVEGTTLPVAG*DCFPWFQLGLGWES
Trigger: GCTTTCCCATCCCAGGCCGAGCTGGAACCAAGGGAAGCAATCTCATCCTGCGACAGGCAGTGTGGTGCCCTCCACACCCTGAGATTTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR GCA 90 bp CCTGTGGACTCTAAAGCTGGGCTCTACCCATTCCTCTGCCTGGTTTaGCGGTGGAGGTCAAGGCCACTCCCTTTCCGCAAACCTGAAGGC +
Preference number: 1 (lower is better)
Translates to: PVDSKAGLYPFLCLV*RWRSRPLPFRKPEG
Trigger: GCCTTCAGGTTTGCGGAAAGGGAGTGGCCTTGACCTCCACCGGCAAACCAGGCAGAGGAATGGGTAGAGCCCAGCTTTAGAGTCCACAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR CCA 90 bp TTGGTGTGCGGGGAGGGGAGGGTGGTGCTAGAGCCCAGTGAGAGGTaGTACAGGTGGACATCAAAGTCACATTGTGGCAGCTGGCACAGA +
Preference number: 1 (lower is better)
Translates to: LVCGEGRVVLEPSER*YRWTSKSHCGSWHR
Trigger: TCTGTGCCAGCTGCCACAATGTGACTTTGATGTCCACCTGTACCACCTCTCACTGGGCTCTAGCACCACCCTCCCCTCCCCGCACACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR TCA 90 bp CCTGGTTTGCCGGTGGAGGTCAAGGCCACTCCCTTTCCGCAAACCTaGAGGCTGCACATTGCATCCCCCAGTCTGAGTGAACATCTCCAG +
Preference number: 1 (lower is better)
Translates to: PGLPVEVKATPFPQT*RLHIASPSLSEHLQ
Trigger: CTGGAGATGTTCACTCAGACTGGGGGATGCAATGTGCAGCCTTCAGGTTTGCGGAAAGGGAGTGGCCTTGACCTCCACCGGCAAACCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR TCA 90 bp TGTTCAGTTGGTGTGCGGGGAGGGGAGGGTGGTGCTAGAGCCCAGTaGGAGGTGGTACAGGTGGACATCAAAGTCACATTGTGGCAGCTG +
Preference number: 1 (lower is better)
Translates to: CSVGVRGGEGGARAQ*EVVQVDIKVTLWQL
Trigger: CAGCTGCCACAATGTGACTTTGATGTCCACCTGTACCACCTCTCACTGGGCTCTAGCACCACCCTCCCCTCCCCGCACACCAACTGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR GCA 90 bp TTTGGGTCCACACACTTTGCTTCTCAGAGCTGTGTTCAGTTGGTGTaGGGGGAGGGGAGGGTGGTGCTAGAGCCCAGTGAGAGGTGGTAC +
Preference number: 1 (lower is better)
Translates to: FGSTHFASQSCVQLV*GEGRVVLEPSERWY
Trigger: GTACCACCTCTCACTGGGCTCTAGCACCACCCTCCCCTCCCCGCACACCAACTGAACACAGCTCTGAGAAGCAAAGTGTGTGGACCCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR CCA 90 bp GACTCTAAAGCTGGGCTCTACCCATTCCTCTGCCTGGTTTGCCGGTaGAGGTCAAGGCCACTCCCTTTCCGCAAACCTGAAGGCTGCACA +
Preference number: 1 (lower is better)
Translates to: DSKAGLYPFLCLVCR*RSRPLPFRKPEGCT
Trigger: TGTGCAGCCTTCAGGTTTGCGGAAAGGGAGTGGCCTTGACCTCCACCGGCAAACCAGGCAGAGGAATGGGTAGAGCCCAGCTTTAGAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR CCA 90 bp CTTTCCCTGTGGACTCTAAAGCTGGGCTCTACCCATTCCTCTGCCTaGTTTGCCGGTGGAGGTCAAGGCCACTCCCTTTCCGCAAACCTG +
Preference number: 1 (lower is better)
Translates to: LSLWTLKLGSTHSSA*FAGGGQGHSLSANL
Trigger: CAGGTTTGCGGAAAGGGAGTGGCCTTGACCTCCACCGGCAAACCAGGCAGAGGAATGGGTAGAGCCCAGCTTTAGAGTCCACAGGGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR CCA 90 bp GCCTCCTGTGGCCGACGTCAGGATGGCAATGCAGAACTCAAAGGATaGAGCAGCAGAAGCACGGGACAGACTCAGGCTTGGCAGTTTTGG +
Preference number: 1 (lower is better)
Translates to: ASCGRRQDGNAELKG*SSRSTGQTQAWQFW
Trigger: CCAAAACTGCCAAGCCTGAGTCTGTCCCGTGCTTCTGCTGCTCCATCCTTTGAGTTCTGCATTGCCATCCTGACGTCGGCCACAGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR TCA 90 bp CTCCCTTTCCGCAAACCTGAAGGCTGCACATTGCATCCCCCAGTCTaGGTGAACATCTCCAGGAAGAGCCACCTGCACCTTGGCCAACTG +
Preference number: 1 (lower is better)
Translates to: LPFRKPEGCTLHPPV*VNISRKSHLHLGQL
Trigger: CAGTTGGCCAAGGTGCAGGTGGCTCTTCCTGGAGATGTTCACTCAGACTGGGGGATGCAATGTGCAGCCTTCAGGTTTGCGGAAAGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR GCA 90 bp GCAAAGCACCTGGCCTTCTGTAAGCACTCTGGAATCTGTGGGCGCTaGCTCTGTAAGCCGCAAACGTCTGAAATCTCAGGGTGTGGAGGG +
Preference number: 1 (lower is better)
Translates to: AKHLAFCKHSGICGR*LCKPQTSEISGCGG
Trigger: CCCTCCACACCCTGAGATTTCAGACGTTTGCGGCTTACAGAGGCAGCGCCCACAGATTCCAGAGTGCTTACAGAAGGCCAGGTGCTTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR GCA 90 bp CTAGCTTTCCCTGTGGACTCTAAAGCTGGGCTCTACCCATTCCTCTaGCTGGTTTGCCGGTGGAGGTCAAGGCCACTCCCTTTCCGCAAA +
Preference number: 1 (lower is better)
Translates to: LAFPVDSKAGLYPFL*LVCRWRSRPLPFRK
Trigger: TTTGCGGAAAGGGAGTGGCCTTGACCTCCACCGGCAAACCAGGCAGAGGAATGGGTAGAGCCCAGCTTTAGAGTCCACAGGGAAAGCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR GCA 90 bp AGCTGGAAGAAAGCAGGCCTCCTGTGGCCGACGTCAGGATGGCAATaGAGAACTCAAAGGATGGAGCAGCAGAAGCACGGGACAGACTCA +
Preference number: 1 (lower is better)
Translates to: SWKKAGLLWPTSGWQ*RTQRMEQQKHGTDS
Trigger: TGAGTCTGTCCCGTGCTTCTGCTGCTCCATCCTTTGAGTTCTGCATTGCCATCCTGACGTCGGCCACAGGAGGCCTGCTTTCTTCCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR CCA 90 bp CTCGTAATTAGTTCTGTTTCCCTCCTAGGGCACTGTCTGTGTGCGTaGAGGTGTGGGCAGAGGACCACGATGAAGGCCACAGTCCCTCCA +
Preference number: 1 (lower is better)
Translates to: LVISSVSLLGHCLCA*RCGQRTTMKATVPP
Trigger: TGGAGGGACTGTGGCCTTCATCGTGGTCCTCTGCCCACACCTCCACGCACACAGACAGTGCCCTAGGAGGGAAACAGAACTAATTACGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
3UTR CCA 90 bp AACAACAGCTGGAAGAAAGCAGGCCTCCTGTGGCCGACGTCAGGATaGCAATGCAGAACTCAAAGGATGGAGCAGCAGAAGCACGGGACA +
Preference number: 1 (lower is better)
Translates to: NNSWKKAGLLWPTSG*QCRTQRMEQQKHGT
Trigger: TGTCCCGTGCTTCTGCTGCTCCATCCTTTGAGTTCTGCATTGCCATCCTGACGTCGGCCACAGGAGGCCTGCTTTCTTCCAGCTGTTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR CCA 90 bp GGCAGGGAACTTGAGAACAACAGCTGGAAGAAAGCAGGCCTCCTGTaGCCGACGTCAGGATGGCAATGCAGAACTCAAAGGATGGAGCAG +
Preference number: 1 (lower is better)
Translates to: GRELENNSWKKAGLL*PTSGWQCRTQRMEQ
Trigger: CTGCTCCATCCTTTGAGTTCTGCATTGCCATCCTGACGTCGGCCACAGGAGGCCTGCTTTCTTCCAGCTGTTGTTCTCAAGTTCCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR GCA 90 bp ACAGTCCCTCCAAAGCCAGCACTCCTGTGCCAAAGCCCCTGCAGGTaGAGGGTGGTGGCCTGTCTGAAGTTTAAAGGCTCACATAGAAAA +
Preference number: 1 (lower is better)
Translates to: TVPPKPALLCQSPCR*RVVACLKFKGSHRK
Trigger: TTTTCTATGTGAGCCTTTAAACTTCAGACAGGCCACCACCCTGCACCTGCAGGGGCTTTGGCACAGGAGTGCTGGCTTTGGAGGGACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
3UTR CCA 90 bp AGTGAGAGGTGGTACAGGTGGACATCAAAGTCACATTGTGGCAGCTaGCACAGAGCCACTGCCTCATCACCTCCAAGCTCATGTTGGAGG +
Preference number: 1 (lower is better)
Translates to: SERWYRWTSKSHCGS*HRATASSPPSSCWR
Trigger: CCTCCAACATGAGCTTGGAGGTGATGAGGCAGTGGCTCTGTGCCAGCTGCCACAATGTGACTTTGATGTCCACCTGTACCACCTCTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR CCA 90 bp GGATGGAGCAGCAGAAGCACGGGACAGACTCAGGCTTGGCAGTTTTaGGTCCACACACTTTGCTTCTCAGAGCTGTGTTCAGTTGGTGTG +
Preference number: 1 (lower is better)
Translates to: GWSSRSTGQTQAWQF*VHTLCFSELCSVGV
Trigger: CACACCAACTGAACACAGCTCTGAGAAGCAAAGTGTGTGGACCCAAAACTGCCAAGCCTGAGTCTGTCCCGTGCTTCTGCTGCTCCATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR CCA 90 bp ACACACTTTACTCAGGTTGGAAGCAGAACGAAAACCCAACACCACTaGCGGGCGATGTGGAGGGGCAGGGAACTTGAGAACAACAGCTGG +
Preference number: 1 (lower is better)
Translates to: THFTQVGSRTKTQHH*RAMWRGRELENNSW
Trigger: CCAGCTGTTGTTCTCAAGTTCCCTGCCCCTCCACATCGCCCGCCAGTGGTGTTGGGTTTTCGTTCTGCTTCCAACCTGAGTAAAGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR CCA 90 bp GAACTCAAAGGATGGAGCAGCAGAAGCACGGGACAGACTCAGGCTTaGCAGTTTTGGGTCCACACACTTTGCTTCTCAGAGCTGTGTTCA +
Preference number: 1 (lower is better)
Translates to: ELKGWSSRSTGQTQA*QFWVHTLCFSELCS
Trigger: TGAACACAGCTCTGAGAAGCAAAGTGTGTGGACCCAAAACTGCCAAGCCTGAGTCTGTCCCGTGCTTCTGCTGCTCCATCCTTTGAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR CCA 90 bp ATGGGAGAACATGGGATGAACTCAGCACACACACTTTACTCAGGTTaGAAGCAGAACGAAAACCCAACACCACTGGCGGGCGATGTGGAG +
Preference number: 1 (lower is better)
Translates to: MGEHGMNSAHTLYSG*KQNENPTPLAGDVE
Trigger: CTCCACATCGCCCGCCAGTGGTGTTGGGTTTTCGTTCTGCTTCCAACCTGAGTAAAGTGTGTGTGCTGAGTTCATCCCATGTTCTCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR CCA 90 bp TGCCTGTCGCAGGATGAGATTGCTTCCCTTGGTTCCAGCTCGGCCTaGGATGGGAAAGCAGCTTTTTGTTTTCTTATTCCATCTGCGTTT +
Preference number: 1 (lower is better)
Translates to: CLSQDEIASLGSSSA*DGKAAFCFLIPSAF
Trigger: AAACGCAGATGGAATAAGAAAACAAAAAGCTGCTTTCCCATCCCAGGCCGAGCTGGAACCAAGGGAAGCAATCTCATCCTGCGACAGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR TCA 90 bp CCCACTGCTCTGGTGGTACCTTGGAAAACCCAAAACTGCCAAATCTaGAATGAGGGAAACACATCCTGTGTGAGACCAGTTCCACAGCAT +
Preference number: 1 (lower is better)
Translates to: PTALVVPWKTQNCQI*NEGNTSCVRPVPQH
Trigger: ATGCTGTGGAACTGGTCTCACACAGGATGTGTTTCCCTCATTTCAGATTTGGCAGTTTTGGGTTTTCCAAGGTACCACCAGAGCAGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR GCA 90 bp ATAAATATTTTTCTCAGAATCACCACTCCTTGCTTGGCGTCCTCTTaGCTCCCCCTCGTAATTAGTTCTGTTTCCCTCCTAGGGCACTGT +
Preference number: 1 (lower is better)
Translates to: INIFLRITTPCLASS*LPLVISSVSLLGHC
Trigger: ACAGTGCCCTAGGAGGGAAACAGAACTAATTACGAGGGGGAGGCAAGAGGACGCCAAGCAAGGAGTGGTGATTCTGAGAAAAATATTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
3UTR CCA 90 bp GTTGGAGGTGAAGATCATTCTAACCTGAGAAGCAATGGAAAGATTTaGGCATGGGCCCTAAGGATTCCACTGAATTCTGTGCTAGAGTAT +
Preference number: 1 (lower is better)
Translates to: VGGEDHSNLRSNGKI*AWALRIPLNSVLEY
Trigger: ATACTCTAGCACAGAATTCAGTGGAATCCTTAGGGCCCATGCCCAAATCTTTCCATTGCTTCTCAGGTTAGAATGATCTTCACCTCCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR CCA 90 bp GGTGAAGATCATTCTAACCTGAGAAGCAATGGAAAGATTTGGGCATaGGCCCTAAGGATTCCACTGAATTCTGTGCTAGAGTATCATTTT +
Preference number: 1 (lower is better)
Translates to: GEDHSNLRSNGKIWA*ALRIPLNSVLEYHF
Trigger: AAAATGATACTCTAGCACAGAATTCAGTGGAATCCTTAGGGCCCATGCCCAAATCTTTCCATTGCTTCTCAGGTTAGAATGATCTTCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR-3UTR CCA 90 bp CCAGGCCACATTCGAGCCCGTCTACCCCCAGCTGAGTCGGAGGCCCCTCAGCCCCGCAGCCCTGCGGGCTaGAGCATGGCTTCCCCGCCA +
Preference number: 2 (lower is better)
Translates to: PGHIRARLPPAESEAPQPRSPAG*SMASPP
Trigger: TGGCGGGGAAGCCATGCTCCAGCCCGCAGGGCTGCG...GGGCTGAGGGGCCTCCGACTCAGCTGGGGGTAGACGGGCTCGAATGTGGCCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
3UTR-3UTR GCA 90 bp GCTGAGTCGGAGGCCCCTCAGCCCTGCCCTTGTCTGGGCCGTGCCACACACACACTTTGGTCAGCTGGGTaGTCGCAGGACGCTGGCACC +
Preference number: 2 (lower is better)
Translates to: AESEAPQPCPCLGRATHTLWSAG*SQDAGT
Trigger: GGTGCCAGCGTCCTGCGAGCACCCAGCTGACCAAAG...TGTGTGTGTGGCACGGCCCAGACAAGGGCAGGGCTGAGGGGCCTCCGACTCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
3UTR-3UTR TCA 90 bp TGTCTGTGTGCGTGGAGGTGTGGGCAGAGGACCACGATGAAGGCCACAGTCCCTCCGTCTACCCCCAGCTaGGTCGGAGGCCCCTCAGCC +
Preference number: 2 (lower is better)
Translates to: CLCAWRCGQRTTMKATVPPSTPS*VGGPSA
Trigger: GGCTGAGGGGCCTCCGACTCAGCTGGGGGTAGACGG...AGGGACTGTGGCCTTCATCGTGGTCCTCTGCCCACACCTCCACGCACACAGACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
3UTR-3UTR CCA 90 bp CAGAGGACCACGATGAAGGCCACAGTCCCTCCAAAGCCAGCACTCCTGTGCCAAGTGCTCGCAGGACGCTaGCACCCCGGGGCCTGGGAC +
Preference number: 2 (lower is better)
Translates to: QRTTMKATVPPKPALLCQVLAGR*HPGAWD
Trigger: GTCCCAGGCCCCGGGGTGCCAGCGTCCTGCGAGCAC...TTGGCACAGGAGTGCTGGCTTTGGAGGGACTGTGGCCTTCATCGTGGTCCTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
3UTR-3UTR CCA 90 bp CACATTCGAGCCCGTCTACCCCCAGCTGAGTCGGAGGCCCCTCAGCCCTGCCCTACATCTTTGGTCAGCTaGGTGCTCGCAGGACGCTGG +
Preference number: 2 (lower is better)
Translates to: HIRARLPPAESEAPQPCPTSLVS*VLAGRW
Trigger: CCAGCGTCCTGCGAGCACCCAGCTGACCAAAGATGT...AGGGCAGGGCTGAGGGGCCTCCGACTCAGCTGGGGGTAGACGGGCTCGAATGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
3UTR-3UTR CCA 90 bp CTGCTCTGGAGTCCAAGTGGAAAATCTCAGCAGCGCAGCCCTGCGGGCTGGAGCCTGCTTCCATGCCTCTaGAGGCCAGGCTGCCTGGCA +
Preference number: 2 (lower is better)
Translates to: LLWSPSGKSQQRSPAGWSLLPCL*RPGCLA
Trigger: TGCCAGGCAGCCTGGCCTCCAGAGGCATGGAAGCAG...GCTCCAGCCCGCAGGGCTGCGCTGCTGAGATTTTCCACTTGGACTCCAGAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
3UTR-3UTR CCA 90 bp TGCTTGGCGTCCTCTTGCCTCCCCCTCGTAATTAGTTCTGTTTCCCTCCTAGGGGTGCTCGCAGGACGCTaGCACCCCGGGGCCTGGGAC +
Preference number: 2 (lower is better)
Translates to: CLASSCLPLVISSVSLLGVLAGR*HPGAWD
Trigger: GTCCCAGGCCCCGGGGTGCCAGCGTCCTGCGAGCAC...CCCTAGGAGGGAAACAGAACTAATTACGAGGGGGAGGCAAGAGGACGCCAAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
3UTR-3UTR GCA 90 bp CACGATGAAGGCCACAGTCCCTCCAAAGCCAGCACTCCTGTGCCAAAGCCCCTGCTCTGGAGGCCAGGCTaGCTGGCACCATTGGCCAAC +
Preference number: 2 (lower is better)
Translates to: HDEGHSPSKASTPVPKPLLWRPG*LAPLAN
Trigger: GTTGGCCAATGGTGCCAGGCAGCCTGGCCTCCAGAG...CAGGGGCTTTGGCACAGGAGTGCTGGCTTTGGAGGGACTGTGGCCTTCATCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
3UTR-3UTR GCA 90 bp CTAAAGCTGGGCTCTACCCATTCCTCTGCCTGGTTTGCCGGTGGAGGTCAAGGCCTGTGCCAAAGCCCCTaGAGGTGCAGGGTGGTGGCC +
Preference number: 2 (lower is better)
Translates to: LKLGSTHSSAWFAGGGQGLCQSP*RCRVVA
Trigger: GGCCACCACCCTGCACCTGCAGGGGCTTTGGCACAG...GCCTTGACCTCCACCGGCAAACCAGGCAGAGGAATGGGTAGAGCCCAGCTTTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR-3UTR CCA 90 bp ACGATGAAGGCCACAGTCCCTCCAAAGCCAGCACTCCTGTGCCAAAGCCCCTGCGGAGGCCAGGCTGCCTaGCACCATTGGCCAACAGCT +
Preference number: 2 (lower is better)
Translates to: TMKATVPPKPALLCQSPCGGQAA*HHWPTA
Trigger: AGCTGTTGGCCAATGGTGCCAGGCAGCCTGGCCTCC...GCAGGGGCTTTGGCACAGGAGTGCTGGCTTTGGAGGGACTGTGGCCTTCATCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
3UTR-3UTR CCA 90 bp CCAAAGCCAGCACTCCTGTGCCAAAGCCCCTGCAGGTGCAGGGTGGTGGCCTGTACATCTTTGGTCAGCTaGGTGCTCGCAGGACGCTGG +
Preference number: 2 (lower is better)
Translates to: PKPALLCQSPCRCRVVACTSLVS*VLAGRW
Trigger: CCAGCGTCCTGCGAGCACCCAGCTGACCAAAGATGT...ACAGGCCACCACCCTGCACCTGCAGGGGCTTTGGCACAGGAGTGCTGGCTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
3UTR-3UTR GCA 90 bp CACGATGAAGGCCACAGTCCCTCCAAAGCCAGCACTCCTGTGCCAAAGCCCCTGGAGAAGCTGCTTCCATaGCTCTGGAGGCCAGGCTGC +
Preference number: 2 (lower is better)
Translates to: HDEGHSPSKASTPVPKPLEKLLP*LWRPGC
Trigger: GCAGCCTGGCCTCCAGAGGCATGGAAGCAGCTTCTC...CAGGGGCTTTGGCACAGGAGTGCTGGCTTTGGAGGGACTGTGGCCTTCATCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
3UTR-3UTR GCA 90 bp CACCACTGGCGGGCGATGTGGAGGGGCAGGGAACTTGAGAACAACAGCTGGAAGAGGGCACTGTCTGTGTaGGTGGAGGTGTGGGCAGAG +
Preference number: 2 (lower is better)
Translates to: HHWRAMWRGRELENNSWKRALSV*VEVWAE
Trigger: CTCTGCCCACACCTCCACGCACACAGACAGTGCCCT...CTTCCAGCTGTTGTTCTCAAGTTCCCTGCCCCTCCACATCGCCCGCCAGTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR-3UTR TCA 90 bp TGCAGGGTGGTGGCCTGTCTGAAGTTTAAAGGCTCACATAGAAAAGCAGACCCCCCGTCTACCCCCAGCTaGGTCGGAGGCCCCTCAGCC +
Preference number: 2 (lower is better)
Translates to: CRVVACLKFKGSHRKADPPSTPS*VGGPSA
Trigger: GGCTGAGGGGCCTCCGACTCAGCTGGGGGTAGACGG...GGGGTCTGCTTTTCTATGTGAGCCTTTAAACTTCAGACAGGCCACCACCCTGCA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
3UTR-3UTR GCA 90 bp TGCTTGGCGTCCTCTTGCCTCCCCCTCGTAATTAGTTCTGTTTCCCTCCTAGGGCTGTGCCAAAGCCCCTaGAGGTGCAGGGTGGTGGCC +
Preference number: 2 (lower is better)
Translates to: CLASSCLPLVISSVSLLGLCQSP*RCRVVA
Trigger: GGCCACCACCCTGCACCTGCAGGGGCTTTGGCACAG...CCCTAGGAGGGAAACAGAACTAATTACGAGGGGGAGGCAAGAGGACGCCAAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
3UTR-3UTR CCA 90 bp GTCTTCTACAGAGGGAAACATCTTTGGTCAGCTGGGTGCTCGCAGGACGCTGGCGGAGGCCAGGCTGCCTaGCACCATTGGCCAACAGCT +
Preference number: 2 (lower is better)
Translates to: VFYRGKHLWSAGCSQDAGGGQAA*HHWPTA
Trigger: AGCTGTTGGCCAATGGTGCCAGGCAGCCTGGCCTCC...GCCAGCGTCCTGCGAGCACCCAGCTGACCAAAGATGTTTCCCTCTGTAGAAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
3UTR CAA 90 bp ATCTCAGGGTGTGGAGGGCACCACACTGCCTGTCGCAGGATGAGATaGCTTCCCTTGGTTCCAGCTCGGCCTGGGATGGGAAAGCAGCTT +
Preference number: 2 (lower is better)
Translates to: ISGCGGHHTACRRMR*LPLVPARPGMGKQL
Trigger: AAGCTGCTTTCCCATCCCAGGCCGAGCTGGAACCAAGGGAAGCAATCTCATCCTGCGACAGGCAGTGTGGTGCCCTCCACACCCTGAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR-3UTR GCA 90 bp GTCTTCTACAGAGGGAAACATCTTTGGTCAGCTGGGTGCTCGCAGGACGCTGGCGAGAAGCTGCTTCCATaGCTCTGGAGGCCAGGCTGC +
Preference number: 2 (lower is better)
Translates to: VFYRGKHLWSAGCSQDAGEKLLP*LWRPGC
Trigger: GCAGCCTGGCCTCCAGAGGCATGGAAGCAGCTTCTC...GCCAGCGTCCTGCGAGCACCCAGCTGACCAAAGATGTTTCCCTCTGTAGAAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
3UTR-3UTR GCA 90 bp TTGGCGTCCTCTTGCCTCCCCCTCGTAATTAGTTCTGTTTCCCTCCTAGGGCACCAAAGCCCCTGCAGGTaGAGGGTGGTGGCCTGTCTG +
Preference number: 2 (lower is better)
Translates to: LASSCLPLVISSVSLLGHQSPCR*RVVACL
Trigger: CAGACAGGCCACCACCCTGCACCTGCAGGGGCTTTG...GTGCCCTAGGAGGGAAACAGAACTAATTACGAGGGGGAGGCAAGAGGACGCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
3UTR-3UTR CCA 90 bp CAAAGGCAGAAGCTGCTCTGGAGTCCAAGTGGAAAATCTCAGCAGCGCAGCCCTCTGCTTCCATGCCTCTaGAGGCCAGGCTGCCTGGCA +
Preference number: 2 (lower is better)
Translates to: QRQKLLWSPSGKSQQRSPLLPCL*RPGCLA
Trigger: TGCCAGGCAGCCTGGCCTCCAGAGGCATGGAAGCAG...AGGGCTGCGCTGCTGAGATTTTCCACTTGGACTCCAGAGCAGCTTCTGCCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
3UTR-3UTR GCA 90 bp AGCACGGGACAGACTCAGGCTTGGCAGTTTTGGGTCCACACACTTTGCTTCTCACTCTGGAGGCCAGGCTaGCTGGCACCATTGGCCAAC +
Preference number: 2 (lower is better)
Translates to: STGQTQAWQFWVHTLCFSLWRPG*LAPLAN
Trigger: GTTGGCCAATGGTGCCAGGCAGCCTGGCCTCCAGAG...TGAGAAGCAAAGTGTGTGGACCCAAAACTGCCAAGCCTGAGTCTGTCCCGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR-3UTR GCA 90 bp GAGTCTTCTACAGAGGGAAACATCTTTGGTCAGCTGGGTGCTCGCAGGACGCTGTGGGACAGAGGCCGCTaGCCACCAGCAAAGGCAGAA +
Preference number: 2 (lower is better)
Translates to: ESSTEGNIFGQLGARRTLWDRGR*PPAKAE
Trigger: TTCTGCCTTTGCTGGTGGGCAGCGGCCTCTGTCCCA...CAGCGTCCTGCGAGCACCCAGCTGACCAAAGATGTTTCCCTCTGTAGAAGACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
3UTR-3UTR CCA 90 bp GTGTGGGCAGAGGACCACGATGAAGGCCACAGTCCCTCCAAAGCCAGCACTCCTAGAGGGAAACATCTTTaGTCAGCTGGGTGCTCGCAG +
Preference number: 2 (lower is better)
Translates to: VWAEDHDEGHSPSKASTPRGKHL*SAGCSQ
Trigger: CTGCGAGCACCCAGCTGACCAAAGATGTTTCCCTCT...AGGAGTGCTGGCTTTGGAGGGACTGTGGCCTTCATCGTGGTCCTCTGCCCACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
3UTR-3UTR TCA 90 bp TGTCTGTGTGCGTGGAGGTGTGGGCAGAGGACCACGATGAAGGCCACAGTCCCTGGGTGGTGGCCTGTCTaGAGTTTAAAGGCTCACATA +
Preference number: 2 (lower is better)
Translates to: CLCAWRCGQRTTMKATVPGWWPV*SLKAHI
Trigger: TATGTGAGCCTTTAAACTTCAGACAGGCCACCACCC...AGGGACTGTGGCCTTCATCGTGGTCCTCTGCCCACACCTCCACGCACACAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
3UTR-3UTR GCA 90 bp CACCACTGGCGGGCGATGTGGAGGGGCAGGGAACTTGAGAACAACAGCTGGAAGAGCAAAGGCAGAAGCTaGTCTGGAGTCCAAGTGGAA +
Preference number: 2 (lower is better)
Translates to: HHWRAMWRGRELENNSWKSKGRS*SGVQVE
Trigger: TTCCACTTGGACTCCAGAGCAGCTTCTGCCTTTGCT...CTTCCAGCTGTTGTTCTCAAGTTCCCTGCCCCTCCACATCGCCCGCCAGTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR-3UTR CCA 90 bp GTGTGGAGGGCACCACACTGCCTGTCGCAGGATGAGATTGCTTCCCTTGGTTCCAGAGGGAAACATCTTTaGTCAGCTGGGTGCTCGCAG +
Preference number: 2 (lower is better)
Translates to: VWRAPHCLSQDEIASLGSRGKHL*SAGCSQ
Trigger: CTGCGAGCACCCAGCTGACCAAAGATGTTTCCCTCT...GGAACCAAGGGAAGCAATCTCATCCTGCGACAGGCAGTGTGGTGCCCTCCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR-3UTR CCA 90 bp TTGGCGTCCTCTTGCCTCCCCCTCGTAATTAGTTCTGTTTCCCTCCTAGGGCACGTGTGCGTGGAGGTGTaGGCAGAGGACCACGATGAA +
Preference number: 2 (lower is better)
Translates to: LASSCLPLVISSVSLLGHVCVEV*AEDHDE
Trigger: TTCATCGTGGTCCTCTGCCCACACCTCCACGCACAC...GTGCCCTAGGAGGGAAACAGAACTAATTACGAGGGGGAGGCAAGAGGACGCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
3UTR-3UTR CCA 90 bp CACCACTGGCGGGCGATGTGGAGGGGCAGGGAACTTGAGAACAACAGCTGGAAGCAGGCTTGGCAGTTTTaGGTCCACACACTTTGCTTC +
Preference number: 2 (lower is better)
Translates to: HHWRAMWRGRELENNSWKQAWQF*VHTLCF
Trigger: GAAGCAAAGTGTGTGGACCCAAAACTGCCAAGCCTG...CTTCCAGCTGTTGTTCTCAAGTTCCCTGCCCCTCCACATCGCCCGCCAGTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR CAA 90 bp TGTGGAGGGCACCACACTGCCTGTCGCAGGATGAGATTGCTTCCCTaGGTTCCAGCTCGGCCTGGGATGGGAAAGCAGCTTTTTGTTTTC +
Preference number: 2 (lower is better)
Translates to: CGGHHTACRRMRLLP*VPARPGMGKQLFVF
Trigger: GAAAACAAAAAGCTGCTTTCCCATCCCAGGCCGAGCTGGAACCAAGGGAAGCAATCTCATCCTGCGACAGGCAGTGTGGTGCCCTCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR-3UTR TCA 90 bp TTGGTGTGCGGGGAGGGGAGGGTGGTGCTAGAGCCCAGTGAGAGGTGGTACAGGTGGCATATCTATCTGTaGGATCTCCAAGGCTTTCAA +
Preference number: 2 (lower is better)
Translates to: LVCGEGRVVLEPSERWYRWHIYL*DLQGFQ
Trigger: TTGAAAGCCTTGGAGATCTCACAGATAGATATGCCA...CCTGTACCACCTCTCACTGGGCTCTAGCACCACCCTCCCCTCCCCGCACACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR-3UTR GCA 90 bp GGAAGCCATGACCATGGGAGAACATGGGATGAACTCAGCACACACACTTTACTCCTTTGGTCAGCTGGGTaGTCGCAGGACGCTGGCACC +
Preference number: 2 (lower is better)
Translates to: GSHDHGRTWDELSTHTLLLWSAG*SQDAGT
Trigger: GGTGCCAGCGTCCTGCGAGCACCCAGCTGACCAAAG...GAGTAAAGTGTGTGTGCTGAGTTCATCCCATGTTCTCCCATGGTCATGGCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR-3UTR GCA 90 bp GATTGCTTCCCTTGGTTCCAGCTCGGCCTGGGATGGGAAAGCAGCTTTTTGTTTGGCACACAGAGAAGCTaGTTCCATGCCTCTGGAGGC +
Preference number: 2 (lower is better)
Translates to: DCFPWFQLGLGWESSFLFGTQRS*FHASGG
Trigger: GCCTCCAGAGGCATGGAAGCAGCTTCTCTGTGTGCC...AAACAAAAAGCTGCTTTCCCATCCCAGGCCGAGCTGGAACCAAGGGAAGCAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR-3UTR CCA 90 bp GTACATACGTGTGCGTGTGTCAGAAAAGATGGGGCAGTGTGTCCATGCATCCTCGTGTGCGTGGAGGTGTaGGCAGAGGACCACGATGAA +
Preference number: 2 (lower is better)
Translates to: VHTCACVRKDGAVCPCILVCVEV*AEDHDE
Trigger: TTCATCGTGGTCCTCTGCCCACACCTCCACGCACAC...GAGGATGCATGGACACACTGCCCCATCTTTTCTGACACACGCACACGTATGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR CAA 90 bp AGGATGGAGCAGCAGAAGCACGGGACAGACTCAGGCTTGGCAGTTTaGGGTCCACACACTTTGCTTCTCAGAGCTGTGTTCAGTTGGTGT +
Preference number: 2 (lower is better)
Translates to: RMEQQKHGTDSGLAV*GPHTLLLRAVFSWC
Trigger: ACACCAACTGAACACAGCTCTGAGAAGCAAAGTGTGTGGACCCAAAACTGCCAAGCCTGAGTCTGTCCCGTGCTTCTGCTGCTCCATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR-3UTR GCA 90 bp ATCCTCCTACTTAATCTGAGCATATGGTACCCCAAAAGCACACACCCACTGCTCCCCTTGTCTGGGCCGTaGCACACACACATTCCCACG +
Preference number: 2 (lower is better)
Translates to: ILLLNLSIWYPKSTHPLLPLSGP*HTHIPT
Trigger: CGTGGGAATGTGTGTGTGGCACGGCCCAGACAAGGG...GAGCAGTGGGTGTGTGCTTTTGGGGTACCATATGCTCAGATTAAGTAGGAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR-3UTR GCA 90 bp GGAGGGTGTGTGCATGTGTGTACATACGTGTGCGTGTGTCAGAAAAGATGGGGCTGCTTGGCGTCCTCTTaGCTCCCCCTCGTAATTAGT +
Preference number: 2 (lower is better)
Translates to: GGCVHVCTYVCVCQKRWGCLASS*LPLVIS
Trigger: ACTAATTACGAGGGGGAGGCAAGAGGACGCCAAGCA...GCCCCATCTTTTCTGACACACGCACACGTATGTACACACATGCACACACCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR-3UTR CCA 90 bp AGCACGGGACAGACTCAGGCTTGGCAGTTTTGGGTCCACACACTTTGCTTCTCAACACACCCACTGCTCTaGTGGTACCTTGGAAAACCC +
Preference number: 2 (lower is better)
Translates to: STGQTQAWQFWVHTLCFSTHPLL*WYLGKP
Trigger: GGGTTTTCCAAGGTACCACCAGAGCAGTGGGTGTGT...TGAGAAGCAAAGTGTGTGGACCCAAAACTGCCAAGCCTGAGTCTGTCCCGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR-3UTR CCA 90 bp AGCACGGGACAGACTCAGGCTTGGCAGTTTTGGGTCCACACACTTTGCTTCTCAAGCCTGCAAAGCACCTaGCCTTCTGTAAGCACTCTG +
Preference number: 2 (lower is better)
Translates to: STGQTQAWQFWVHTLCFSSLQST*PSVSTL
Trigger: CAGAGTGCTTACAGAAGGCCAGGTGCTTTGCAGGCT...TGAGAAGCAAAGTGTGTGGACCCAAAACTGCCAAGCCTGAGTCTGTCCCGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR CAA 90 bp AGAACTCAAAGGATGGAGCAGCAGAAGCACGGGACAGACTCAGGCTaGGCAGTTTTGGGTCCACACACTTTGCTTCTCAGAGCTGTGTTC +
Preference number: 2 (lower is better)
Translates to: RTQRMEQQKHGTDSG*AVLGPHTLLLRAVF
Trigger: GAACACAGCTCTGAGAAGCAAAGTGTGTGGACCCAAAACTGCCAAGCCTGAGTCTGTCCCGTGCTTCTGCTGCTCCATCCTTTGAGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR CAA 90 bp CATGGGAGAACATGGGATGAACTCAGCACACACACTTTACTCAGGTaGGAAGCAGAACGAAAACCCAACACCACTGGCGGGCGATGTGGA +
Preference number: 2 (lower is better)
Translates to: HGRTWDELSTHTLLR*EAERKPNTTGGRCG
Trigger: TCCACATCGCCCGCCAGTGGTGTTGGGTTTTCGTTCTGCTTCCAACCTGAGTAAAGTGTGTGTGCTGAGTTCATCCCATGTTCTCCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR-3UTR GCA 90 bp AGCACGGGACAGACTCAGGCTTGGCAGTTTTGGGTCCACACACTTTGCTTCTCAAGTGGCGTCCTCGTTTaGTTGTGTGTCTCTTACACG +
Preference number: 2 (lower is better)
Translates to: STGQTQAWQFWVHTLCFSSGVLV*LCVSYT
Trigger: CGTGTAAGAGACACACAAGCAAACGAGGACGCCACT...TGAGAAGCAAAGTGTGTGGACCCAAAACTGCCAAGCCTGAGTCTGTCCCGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR-3UTR CCA 90 bp TTGGCGTCCTCTTGCCTCCCCCTCGTAATTAGTTCTGTTTCCCTCCTAGGGCACAGGCAGAAGCTGCTCTaGAGTCCAAGTGGAAAATCT +
Preference number: 2 (lower is better)
Translates to: LASSCLPLVISSVSLLGHRQKLL*SPSGKS
Trigger: AGATTTTCCACTTGGACTCCAGAGCAGCTTCTGCCT...GTGCCCTAGGAGGGAAACAGAACTAATTACGAGGGGGAGGCAAGAGGACGCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
3UTR-3UTR CCA 90 bp GTACATACGTGTGCGTGTGTCAGAAAAGATGGGGCAGTGTGTCCATGCATCCTCCTTAATCTGAGCATATaGTACCCCAAAAGCACACAC +
Preference number: 2 (lower is better)
Translates to: VHTCACVRKDGAVCPCILLNLSI*YPKSTH
Trigger: GTGTGTGCTTTTGGGGTACCATATGCTCAGATTAAG...GAGGATGCATGGACACACTGCCCCATCTTTTCTGACACACGCACACGTATGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR CCA 72 bp AGCTGGGTGCTCGCAGGACGCTGGCACCCCGGGGCCTaGGACAGAGGCCGCTGCCCACCAGCAAAGGCAGAA +
Preference number: 3 (lower is better)
Translates to: SWVLAGRWHPGA*DRGRCPPAKAE
Trigger: TTCTGCCTTTGCTGGTGGGCAGCGGCCTCTGTCCCAGGCCCCGGGGTGCCAGCGTCCTGCGAGCACCCAGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
3UTR TCA 72 bp CAGGGTGTGGAGGGCACCACACTGCCTGTCGCAGGATaGGATTGCTTCCCTTGGTTCCAGCTCGGCCTGGGA +
Preference number: 3 (lower is better)
Translates to: QGVEGTTLPVAG*DCFPWFQLGLG
Trigger: TCCCAGGCCGAGCTGGAACCAAGGGAAGCAATCTCATCCTGCGACAGGCAGTGTGGTGCCCTCCACACCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR GCA 72 bp GTCTTCTACAGAGGGAAACATCTTTGGTCAGCTGGGTaGTCGCAGGACGCTGGCACCCCGGGGCCTGGGACA +
Preference number: 3 (lower is better)
Translates to: VFYRGKHLWSAG*SQDAGTPGPGT
Trigger: TGTCCCAGGCCCCGGGGTGCCAGCGTCCTGCGAGCACCCAGCTGACCAAAGATGTTTCCCTCTGTAGAAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
3UTR CCA 72 bp CAGAGTCTTCTACAGAGGGAAACATCTTTGGTCAGCTaGGTGCTCGCAGGACGCTGGCACCCCGGGGCCTGG +
Preference number: 3 (lower is better)
Translates to: QSLLQRETSLVS*VLAGRWHPGAW
Trigger: CCAGGCCCCGGGGTGCCAGCGTCCTGCGAGCACCCAGCTGACCAAAGATGTTTCCCTCTGTAGAAGACTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
3UTR TCA 72 bp GTCTGTGTGCGTGGAGGTGTGGGCAGAGGACCACGATaGAGGCCACAGTCCCTCCAAAGCCAGCACTCCTGT +
Preference number: 3 (lower is better)
Translates to: VCVRGGVGRGPR*RPQSLQSQHSC
Trigger: ACAGGAGTGCTGGCTTTGGAGGGACTGTGGCCTTCATCGTGGTCCTCTGCCCACACCTCCACGCACACAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
3UTR CCA 72 bp GAGGCCGCTGCCCACCAGCAAAGGCAGAAGCTGCTCTaGAGTCCAAGTGGAAAATCTCAGCAGCGCAGCCCT +
Preference number: 3 (lower is better)
Translates to: EAAAHQQRQKLL*SPSGKSQQRSP
Trigger: AGGGCTGCGCTGCTGAGATTTTCCACTTGGACTCCAGAGCAGCTTCTGCCTTTGCTGGTGGGCAGCGGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
3UTR TCA 72 bp ACACCACTGGCGGGCGATGTGGAGGGGCAGGGAACTTaGGAACAACAGCTGGAAGAAAGCAGGCCTCCTGTG +
Preference number: 3 (lower is better)
Translates to: TPLAGDVEGQGT*EQQLEESRPPV
Trigger: CACAGGAGGCCTGCTTTCTTCCAGCTGTTGTTCTCAAGTTCCCTGCCCCTCCACATCGCCCGCCAGTGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR GCA 72 bp CCTGTGGACTCTAAAGCTGGGCTCTACCCATTCCTCTaGCTGGTTTGCCGGTGGAGGTCAAGGCCACTCCCT +
Preference number: 3 (lower is better)
Translates to: PVDSKAGLYPFL*LVCRWRSRPLP
Trigger: AGGGAGTGGCCTTGACCTCCACCGGCAAACCAGGCAGAGGAATGGGTAGAGCCCAGCTTTAGAGTCCACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR CCA 72 bp GAGGCTTGGCTTCCTCGTCCCAGCCTGCAAAGCACCTaGCCTTCTGTAAGCACTCTGGAATCTGTGGGCGCT +
Preference number: 3 (lower is better)
Translates to: EAWLPRPSLQST*PSVSTLESVGA
Trigger: AGCGCCCACAGATTCCAGAGTGCTTACAGAAGGCCAGGTGCTTTGCAGGCTGGGACGAGGAAGCCAAGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR CCA 72 bp GCTGGGCTCTACCCATTCCTCTGCCTGGTTTGCCGGTaGAGGTCAAGGCCACTCCCTTTCCGCAAACCTGAA +
Preference number: 3 (lower is better)
Translates to: AGLYPFLCLVCR*RSRPLPFRKPE
Trigger: TTCAGGTTTGCGGAAAGGGAGTGGCCTTGACCTCCACCGGCAAACCAGGCAGAGGAATGGGTAGAGCCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR CCA 72 bp GGGGAGGGGAGGGTGGTGCTAGAGCCCAGTGAGAGGTaGTACAGGTGGACATCAAAGTCACATTGTGGCAGC +
Preference number: 3 (lower is better)
Translates to: GEGRVVLEPSER*YRWTSKSHCGS
Trigger: GCTGCCACAATGTGACTTTGATGTCCACCTGTACCACCTCTCACTGGGCTCTAGCACCACCCTCCCCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR-3UTR CAA 90 bp ACGATGAAGGCCACAGTCCCTCCAAAGCCAGCACTCCTGTGCCAAAGCCCCTGCCAGAGGGAAACATCTTaGGTCAGCTGGGTGCTCGCA +
Preference number: 3 (lower is better)
Translates to: TMKATVPPKPALLCQSPCQRETS*VSWVLA
Trigger: TGCGAGCACCCAGCTGACCAAAGATGTTTCCCTCTG...GCAGGGGCTTTGGCACAGGAGTGCTGGCTTTGGAGGGACTGTGGCCTTCATCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
3UTR-3UTR CAA 90 bp CCGCAAACGTCTGAAATCTCAGGGTGTGGAGGGCACCACACTGCCTGTCGCAGGCAGAATCACCACTCCTaGCTTGGCGTCCTCTTGCCT +
Preference number: 3 (lower is better)
Translates to: PQTSEISGCGGHHTACRRQNHHS*LGVLLP
Trigger: AGGCAAGAGGACGCCAAGCAAGGAGTGGTGATTCTG...CCTGCGACAGGCAGTGTGGTGCCCTCCACACCCTGAGATTTCAGACGTTTGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR TCA 72 bp CCGGTGGAGGTCAAGGCCACTCCCTTTCCGCAAACCTaGAGGCTGCACATTGCATCCCCCAGTCTGAGTGAA +
Preference number: 3 (lower is better)
Translates to: PVEVKATPFPQT*RLHIASPSLSE
Trigger: TTCACTCAGACTGGGGGATGCAATGTGCAGCCTTCAGGTTTGCGGAAAGGGAGTGGCCTTGACCTCCACCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR CCA 72 bp AGTTCTGTTTCCCTCCTAGGGCACTGTCTGTGTGCGTaGAGGTGTGGGCAGAGGACCACGATGAAGGCCACA +
Preference number: 3 (lower is better)
Translates to: SSVSLLGHCLCA*RCGQRTTMKAT
Trigger: TGTGGCCTTCATCGTGGTCCTCTGCCCACACCTCCACGCACACAGACAGTGCCCTAGGAGGGAAACAGAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
3UTR CCA 72 bp TGGACTCTAAAGCTGGGCTCTACCCATTCCTCTGCCTaGTTTGCCGGTGGAGGTCAAGGCCACTCCCTTTCC +
Preference number: 3 (lower is better)
Translates to: WTLKLGSTHSSA*FAGGGQGHSLS
Trigger: GGAAAGGGAGTGGCCTTGACCTCCACCGGCAAACCAGGCAGAGGAATGGGTAGAGCCCAGCTTTAGAGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR CCA 72 bp GGCCGACGTCAGGATGGCAATGCAGAACTCAAAGGATaGAGCAGCAGAAGCACGGGACAGACTCAGGCTTGG +
Preference number: 3 (lower is better)
Translates to: GRRQDGNAELKG*SSRSTGQTQAW
Trigger: CCAAGCCTGAGTCTGTCCCGTGCTTCTGCTGCTCCATCCTTTGAGTTCTGCATTGCCATCCTGACGTCGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR-3UTR CAA 90 bp GTGTGGAGGGCACCACACTGCCTGTCGCAGGATGAGATTGCTTCCCTTGGTTCCGGCGTCCTCGTTTGCTaGTGTGTCTCTTACACGCAT +
Preference number: 3 (lower is better)
Translates to: VWRAPHCLSQDEIASLGSGVLVC*CVSYTH
Trigger: ATGCGTGTAAGAGACACACAAGCAAACGAGGACGCC...GGAACCAAGGGAAGCAATCTCATCCTGCGACAGGCAGTGTGGTGCCCTCCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR GCA 72 bp TCTAAAGCTGGGCTCTACCCATTCCTCTGCCTGGTTTaGCGGTGGAGGTCAAGGCCACTCCCTTTCCGCAAA +
Preference number: 3 (lower is better)
Translates to: SKAGLYPFLCLV*RWRSRPLPFRK
Trigger: TTTGCGGAAAGGGAGTGGCCTTGACCTCCACCGGCAAACCAGGCAGAGGAATGGGTAGAGCCCAGCTTTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR CCA 72 bp ACTCAGGTTGGAAGCAGAACGAAAACCCAACACCACTaGCGGGCGATGTGGAGGGGCAGGGAACTTGAGAAC +
Preference number: 3 (lower is better)
Translates to: TQVGSRTKTQHH*RAMWRGRELEN
Trigger: GTTCTCAAGTTCCCTGCCCCTCCACATCGCCCGCCAGTGGTGTTGGGTTTTCGTTCTGCTTCCAACCTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR-3UTR CAA 90 bp GTGTGGAGGGCACCACACTGCCTGTCGCAGGATGAGATTGCTTCCCTTGGTTCCTATTCCATCTGCGTTTaGCTTAGGGGAAGGAGGGTG +
Preference number: 3 (lower is better)
Translates to: VWRAPHCLSQDEIASLGSYSICV*LRGRRV
Trigger: CACCCTCCTTCCCCTAAGCAAAACGCAGATGGAATA...GGAACCAAGGGAAGCAATCTCATCCTGCGACAGGCAGTGTGGTGCCCTCCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR GCA 72 bp CTGGCCTTCTGTAAGCACTCTGGAATCTGTGGGCGCTaGCTCTGTAAGCCGCAAACGTCTGAAATCTCAGGG +
Preference number: 3 (lower is better)
Translates to: LAFCKHSGICGR*LCKPQTSEISG
Trigger: CCCTGAGATTTCAGACGTTTGCGGCTTACAGAGGCAGCGCCCACAGATTCCAGAGTGCTTACAGAAGGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR CCA 72 bp CCCATGGGGCCGGGAAGCCATGACCATGGGAGAACATaGGATGAACTCAGCACACACACTTTACTCAGGTTG +
Preference number: 3 (lower is better)
Translates to: PMGPGSHDHGRT*DELSTHTLLRL
Trigger: CAACCTGAGTAAAGTGTGTGTGCTGAGTTCATCCCATGTTCTCCCATGGTCATGGCTTCCCGGCCCCATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR GCA 72 bp CAGACTCAGGCTTGGCAGTTTTGGGTCCACACACTTTaGTTCTCAGAGCTGTGTTCAGTTGGTGTGCGGGGA +
Preference number: 3 (lower is better)
Translates to: QTQAWQFWVHTL*FSELCSVGVRG
Trigger: TCCCCGCACACCAACTGAACACAGCTCTGAGAAGCAAAGTGTGTGGACCCAAAACTGCCAAGCCTGAGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR CCA 72 bp TGGTACAGGTGGACATCAAAGTCACATTGTGGCAGCTaGCACAGAGCCACTGCCTCATCACCTCCAAGCTCA +
Preference number: 3 (lower is better)
Translates to: WYRWTSKSHCGS*HRATASSPPSS
Trigger: TGAGCTTGGAGGTGATGAGGCAGTGGCTCTGTGCCAGCTGCCACAATGTGACTTTGATGTCCACCTGTACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR-3UTR CAA 90 bp CAAAGCACCTGGCCTTCTGTAAGCACTCTGGAATCTGTGGGCGCTGCCTCTGTATGCTCTGGTGGTACCTaGGAAAACCCAAAACTGCCA +
Preference number: 3 (lower is better)
Translates to: QSTWPSVSTLESVGAASVCSGGT*ENPKLP
Trigger: TGGCAGTTTTGGGTTTTCCAAGGTACCACCAGAGCA...TACAGAGGCAGCGCCCACAGATTCCAGAGTGCTTACAGAAGGCCAGGTGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR CCA 72 bp AGCAGAAGCACGGGACAGACTCAGGCTTGGCAGTTTTaGGTCCACACACTTTGCTTCTCAGAGCTGTGTTCA +
Preference number: 3 (lower is better)
Translates to: SRSTGQTQAWQF*VHTLCFSELCS
Trigger: TGAACACAGCTCTGAGAAGCAAAGTGTGTGGACCCAAAACTGCCAAGCCTGAGTCTGTCCCGTGCTTCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR CCA 72 bp CATGGGATGAACTCAGCACACACACTTTACTCAGGTTaGAAGCAGAACGAAAACCCAACACCACTGGCGGGC +
Preference number: 3 (lower is better)
Translates to: HGMNSAHTLYSG*KQNENPTPLAG
Trigger: GCCCGCCAGTGGTGTTGGGTTTTCGTTCTGCTTCCAACCTGAGTAAAGTGTGTGTGCTGAGTTCATCCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR-3UTR CAA 90 bp GGAAGCCATGACCATGGGAGAACATGGGATGAACTCAGCACACACACTTTACTCTGTCGCAGGATGAGATaGCTTCCCTTGGTTCCAGCT +
Preference number: 3 (lower is better)
Translates to: GSHDHGRTWDELSTHTLLCRRMR*LPLVPA
Trigger: AGCTGGAACCAAGGGAAGCAATCTCATCCTGCGACA...GAGTAAAGTGTGTGTGCTGAGTTCATCCCATGTTCTCCCATGGTCATGGCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR CCA 72 bp GTGTGTCCATGCATCCTCCTACTTAATCTGAGCATATaGTACCCCAAAAGCACACACCCACTGCTCTGGTGG +
Preference number: 3 (lower is better)
Translates to: VCPCILLLNLSI*YPKSTHPLLWW
Trigger: CCACCAGAGCAGTGGGTGTGTGCTTTTGGGGTACCATATGCTCAGATTAAGTAGGAGGATGCATGGACACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR GCA 72 bp TTTCTCAGAATCACCACTCCTTGCTTGGCGTCCTCTTaGCTCCCCCTCGTAATTAGTTCTGTTTCCCTCCTA +
Preference number: 3 (lower is better)
Translates to: FLRITTPCLASS*LPLVISSVSLL
Trigger: TAGGAGGGAAACAGAACTAATTACGAGGGGGAGGCAAGAGGACGCCAAGCAAGGAGTGGTGATTCTGAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
3UTR GCA 72 bp TGTGCGTGTGTCAGAAAAGATGGGGCAGTGTGTCCATaGATCCTCCTACTTAATCTGAGCATATGGTACCCC +
Preference number: 3 (lower is better)
Translates to: CACVRKDGAVCP*ILLLNLSIWYP
Trigger: GGGGTACCATATGCTCAGATTAAGTAGGAGGATGCATGGACACACTGCCCCATCTTTTCTGACACACGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR CCA 72 bp CAGGATGAGATTGCTTCCCTTGGTTCCAGCTCGGCCTaGGATGGGAAAGCAGCTTTTTGTTTTCTTATTCCA +
Preference number: 3 (lower is better)
Translates to: QDEIASLGSSSA*DGKAAFCFLIP
Trigger: TGGAATAAGAAAACAAAAAGCTGCTTTCCCATCCCAGGCCGAGCTGGAACCAAGGGAAGCAATCTCATCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR CCA 72 bp CATTCTAACCTGAGAAGCAATGGAAAGATTTGGGCATaGGCCCTAAGGATTCCACTGAATTCTGTGCTAGAG +
Preference number: 3 (lower is better)
Translates to: HSNLRSNGKIWA*ALRIPLNSVLE
Trigger: CTCTAGCACAGAATTCAGTGGAATCCTTAGGGCCCATGCCCAAATCTTTCCATTGCTTCTCAGGTTAGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR CCA 72 bp GAAGATCATTCTAACCTGAGAAGCAATGGAAAGATTTaGGCATGGGCCCTAAGGATTCCACTGAATTCTGTG +
Preference number: 3 (lower is better)
Translates to: EDHSNLRSNGKI*AWALRIPLNSV
Trigger: CACAGAATTCAGTGGAATCCTTAGGGCCCATGCCCAAATCTTTCCATTGCTTCTCAGGTTAGAATGATCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp GGCACCCCGGGGCCTGGGACAGAGGCCGCTGCCCACCAGCAAAGGCAGAAGCTGCCCCGGGTTTCTTGGTaGAGCCGCGGGCAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: GTPGPGTEAAAHQQRQKLPRVSW*SRGQSP
Trigger: GGGGCTCTGCCCGCGGCTCCACCAAGAAACCCGGGG...CAGCTTCTGCCTTTGCTGGTGGGCAGCGGCCTCTGTCCCAGGCCCCGGGGTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR TCA 90 bp GCAGCGCAGCCCTGCGGGCTGGAGCATGGCTTCCCCGCCACCCCCGGCACACAGCTATGGCGTTGGCGGTaGCCAGCAGGTCGGCGTTGT +
Preference number: 4 (lower is better)
Translates to: AAQPCGLEHGFPATPGTQLWRWR*PAGRRC
Trigger: ACAACGCCGACCTGCTGGTCACCGCCAACGCCATAG...CTGTGTGCCGGGGGTGGCGGGGAAGCCATGCTCCAGCCCGCAGGGCTGCGCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp CAGCCCTGCGGGCTGGAGCATGGCTTCCCCGCCACCCCCGGCACACAGAGAAGCTGCTGGTTCTCCCGCTaGGAGTGGAGCCGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: QPCGLEHGFPATPGTQRSCWFSR*EWSRAW
Trigger: CCAGGCGCGGCTCCACTCGCAGCGGGAGAACCAGCA...GCTTCTCTGTGTGCCGGGGGTGGCGGGGAAGCCATGCTCCAGCCCGCAGGGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp GCTGAGTCGGAGGCCCCTCAGCCCTGCCCTTGTCTGGGCCGTGCCACACACACACCGAGTCCGCCGAGCTaGCGCCATCCCCGGACCCCT +
Preference number: 4 (lower is better)
Translates to: AESEAPQPCPCLGRATHTPSPPS*RHPRTP
Trigger: AGGGGTCCGGGGATGGCGGCAGCTCGGCGGACTCGG...TGTGTGTGTGGCACGGCCCAGACAAGGGCAGGGCTGAGGGGCCTCCGACTCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp GCTGAGTCGGAGGCCCCTCAGCCCTGCCCTTGTCTGGGCCGTGCCACACACACACGCTGCGCCAGCGGCTaGCCAGGCGCTGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: AESEAPQPCPCLGRATHTRCASG*PGAAAA
Trigger: AGCAGCAGCAGCGCCTGGCCAGCCGCTGGCGCAGCG...TGTGTGTGTGGCACGGCCCAGACAAGGGCAGGGCTGAGGGGCCTCCGACTCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR TCA 90 bp CACATTCGAGCCCGTCTACCCCCAGCTGAGTCGGAGGCCCCTCAGCCCTGCCCTCCGTCTACCCCCAGCTaGGTCGGAGGCCCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: HIRARLPPAESEAPQPCPPSTPS*VGGPSA
Trigger: GGCTGAGGGGCCTCCGACTCAGCTGGGGGTAGACGG...AGGGCAGGGCTGAGGGGCCTCCGACTCAGCTGGGGGTAGACGGGCTCGAATGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp GCAGCGCAGCCCTGCGGGCTGGAGCATGGCTTCCCCGCCACCCCCGGCACACAGTTCCTGGAGAGGGTCTaGAGTGGGGAGGGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: AAQPCGLEHGFPATPGTQFLERV*SGEGKS
Trigger: GCTCTTCCCCTCCCCACTGCAGACCCTCTCCAGGAA...CTGTGTGCCGGGGGTGGCGGGGAAGCCATGCTCCAGCCCGCAGGGCTGCGCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp GCAGCGCAGCCCTGCGGGCTGGAGCATGGCTTCCCCGCCACCCCCGGCACACAGGAGAAGCTGCTTCCATaGCTCTGGAGGCCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: AAQPCGLEHGFPATPGTQEKLLP*LWRPGC
Trigger: GCAGCCTGGCCTCCAGAGGCATGGAAGCAGCTTCTC...CTGTGTGCCGGGGGTGGCGGGGAAGCCATGCTCCAGCCCGCAGGGCTGCGCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp CCAGGCCACATTCGAGCCCGTCTACCCCCAGCTGAGTCGGAGGCCCCTCAGCCCCAGGCCAGGCCCATGTaGTCCTGGTGGAAGGCGGCG +
Preference number: 4 (lower is better)
Translates to: PGHIRARLPPAESEAPQPQARPM*SWWKAA
Trigger: CGCCGCCTTCCACCAGGACCACATGGGCCTGGCCTG...GGGCTGAGGGGCCTCCGACTCAGCTGGGGGTAGACGGGCTCGAATGTGGCCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp CACATTCGAGCCCGTCTACCCCCAGCTGAGTCGGAGGCCCCTCAGCCCTGCCCTCGCAGCCCTGCGGGCTaGAGCATGGCTTCCCCGCCA +
Preference number: 4 (lower is better)
Translates to: HIRARLPPAESEAPQPCPRSPAG*SMASPP
Trigger: TGGCGGGGAAGCCATGCTCCAGCCCGCAGGGCTGCG...AGGGCAGGGCTGAGGGGCCTCCGACTCAGCTGGGGGTAGACGGGCTCGAATGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR TCA 90 bp GCTGAGTCGGAGGCCCCTCAGCCCTGCCCTTGTCTGGGCCGTGCCACACACACACGCCCAGGCTGTAGTTaGCGGCCGACTCCGCCACGT +
Preference number: 4 (lower is better)
Translates to: AESEAPQPCPCLGRATHTRPGCS*RPTPPR
Trigger: ACGTGGCGGAGTCGGCCGTCAACTACAGCCTGGGCG...TGTGTGTGTGGCACGGCCCAGACAAGGGCAGGGCTGAGGGGCCTCCGACTCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp GGCACCCCGGGGCCTGGGACAGAGGCCGCTGCCCACCAGCAAAGGCAGAAGCTGTCCACCTGCTGGGCGTaGAGGTACAGGGCCAGCACA +
Preference number: 4 (lower is better)
Translates to: GTPGPGTEAAAHQQRQKLSTCWA*RYRAST
Trigger: TGTGCTGGCCCTGTACCTGCACGCCCAGCAGGTGGA...CAGCTTCTGCCTTTGCTGGTGGGCAGCGGCCTCTGTCCCAGGCCCCGGGGTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp CATGGCTTCCCCGCCACCCCCGGCACACAGAGAAGCTGCTTCCATGCCTCTGGACCCGGGGCCCTGCGCTaGAGCGGGGCATCTTGGCAC +
Preference number: 4 (lower is better)
Translates to: HGFPATPGTQRSCFHASGPGALR*SGASWH
Trigger: GTGCCAAGATGCCCCGCTGCAGCGCAGGGCCCCGGG...TCCAGAGGCATGGAAGCAGCTTCTCTGTGTGCCGGGGGTGGCGGGGAAGCCATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR GCA 90 bp TCCAAAGCCAGCACTCCTGTGCCAAAGCCCCTGCAGGTGCAGGGTGGTGGCCTGCGTCGTCGTCGTCGCTaGGCCAGCGGCTGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: SKASTPVPKPLQVQGGGLRRRRR*ASGWPG
Trigger: GCCTGGCCAGCCGCTGGCGCAGCGACGACGACGACG...CAGGCCACCACCCTGCACCTGCAGGGGCTTTGGCACAGGAGTGCTGGCTTTGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp CAGCCCTGCGGGCTGGAGCATGGCTTCCCCGCCACCCCCGGCACACAGAGAAGCGGAGGCCAGGCTGCCTaGCACCATTGGCCAACAGCT +
Preference number: 4 (lower is better)
Translates to: QPCGLEHGFPATPGTQRSGGQAA*HHWPTA
Trigger: AGCTGTTGGCCAATGGTGCCAGGCAGCCTGGCCTCC...GCTTCTCTGTGTGCCGGGGGTGGCGGGGAAGCCATGCTCCAGCCCGCAGGGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp GCAGCGCAGCCCTGCGGGCTGGAGCATGGCTTCCCCGCCACCCCCGGCACACAGGTGTGCGTGGAGGTGTaGGCAGAGGACCACGATGAA +
Preference number: 4 (lower is better)
Translates to: AAQPCGLEHGFPATPGTQVCVEV*AEDHDE
Trigger: TTCATCGTGGTCCTCTGCCCACACCTCCACGCACAC...CTGTGTGCCGGGGGTGGCGGGGAAGCCATGCTCCAGCCCGCAGGGCTGCGCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR TCA 90 bp GGCACCCCGGGGCCTGGGACAGAGGCCGCTGCCCACCAGCAAAGGCAGAAGCTGCGTGGAAGGCCAACATaGCCAGGCACACGAGCACCA +
Preference number: 4 (lower is better)
Translates to: GTPGPGTEAAAHQQRQKLRGRPT*PGTRAP
Trigger: TGGTGCTCGTGTGCCTGGTCATGTTGGCCTTCCACG...CAGCTTCTGCCTTTGCTGGTGGGCAGCGGCCTCTGTCCCAGGCCCCGGGGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR TCA 90 bp GGCACCCCGGGGCCTGGGACAGAGGCCGCTGCCCACCAGCAAAGGCAGAAGCTGGGCAGAGGACCACGATaGAGGCCACAGTCCCTCCAA +
Preference number: 4 (lower is better)
Translates to: GTPGPGTEAAAHQQRQKLGRGPR*RPQSLQ
Trigger: TTGGAGGGACTGTGGCCTTCATCGTGGTCCTCTGCC...CAGCTTCTGCCTTTGCTGGTGGGCAGCGGCCTCTGTCCCAGGCCCCGGGGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp GGCACCCCGGGGCCTGGGACAGAGGCCGCTGCCCACCAGCAAAGGCAGAAGCTGAGTACTCGGGGAAGTTaGAGTTGGGCCAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GTPGPGTEAAAHQQRQKLSTRGS*SWARGC
Trigger: GCAGCCCCTGGCCCAACTGCAACTTCCCCGAGTACT...CAGCTTCTGCCTTTGCTGGTGGGCAGCGGCCTCTGTCCCAGGCCCCGGGGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp GCTGAGTCGGAGGCCCCTCAGCCCTGCCCTTGTCTGGGCCGTGCCACACACACAGGTCGGGTACACCGGTaGTGTCCATGCGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: AESEAPQPCPCLGRATHTGRVHR*CPCGWP
Trigger: TGGCCAGCCGCATGGACAGCACCGGTGTACCCGACC...TGTGTGTGTGGCACGGCCCAGACAAGGGCAGGGCTGAGGGGCCTCCGACTCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp CCAGGCCACATTCGAGCCCGTCTACCCCCAGCTGAGTCGGAGGCCCCTCAGCCCCTCTGGAGGCCAGGCTaGCTGGCACCATTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: PGHIRARLPPAESEAPQPLWRPG*LAPLAN
Trigger: GTTGGCCAATGGTGCCAGGCAGCCTGGCCTCCAGAG...GGGCTGAGGGGCCTCCGACTCAGCTGGGGGTAGACGGGCTCGAATGTGGCCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp GGCACCCCGGGGCCTGGGACAGAGGCCGCTGCCCACCAGCAAAGGCAGAAGCTGAGGGCACTGTCTGTGTaGGTGGAGGTGTGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: GTPGPGTEAAAHQQRQKLRALSV*VEVWAE
Trigger: CTCTGCCCACACCTCCACGCACACAGACAGTGCCCT...CAGCTTCTGCCTTTGCTGGTGGGCAGCGGCCTCTGTCCCAGGCCCCGGGGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp GCAGCGCAGCCCTGCGGGCTGGAGCATGGCTTCCCCGCCACCCCCGGCACACAGAGGGGCCCCAGAGATTaGCAAATTCAGGTGGGCGTT +
Preference number: 4 (lower is better)
Translates to: AAQPCGLEHGFPATPGTQRGPRD*QIQVGV
Trigger: AACGCCCACCTGAATTTGGCAATCTCTGGGGCCCCT...CTGTGTGCCGGGGGTGGCGGGGAAGCCATGCTCCAGCCCGCAGGGCTGCGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000491190.5
CDS-3UTR CCA 90 bp GGCACCCCGGGGCCTGGGACAGAGGCCGCTGCCCACCAGCAAAGGCAGAAGCTGGGGTTCGCACTCTCCTaGGCGTTCTTGTCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: GTPGPGTEAAAHQQRQKLGFALS*AFLSLG
Trigger: CCCCAAGGACAAGAACGCCCAGGAGAGTGCGAACCC...CAGCTTCTGCCTTTGCTGGTGGGCAGCGGCCTCTGTCCCAGGCCCCGGGGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp GCTGAGTCGGAGGCCCCTCAGCCCTGCCCTTGTCTGGGCCGTGCCACACACACACCCCGGCACTCCAGCTaGTACGTGTTGGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: AESEAPQPCPCLGRATHTPRHSS*YVLAAS
Trigger: GCTGGCTGCCAACACGTACCAGCTGGAGTGCCGGGG...TGTGTGTGTGGCACGGCCCAGACAAGGGCAGGGCTGAGGGGCCTCCGACTCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR TCA 90 bp GTGTGGGCAGAGGACCACGATGAAGGCCACAGTCCCTCCAAAGCCAGCACTCCTGGGCGCGGCGCTCGCTaGTTCCGCCTAAGCGGAGCC +
Preference number: 4 (lower is better)
Translates to: VWAEDHDEGHSPSKASTPGRGAR*FRLSGA
Trigger: GGCTCCGCTTAGGCGGAATCAGCGAGCGCCGCGCCC...AGGAGTGCTGGCTTTGGAGGGACTGTGGCCTTCATCGTGGTCCTCTGCCCACAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR TCA 90 bp GCTGAGTCGGAGGCCCCTCAGCCCTGCCCTTGTCTGGGCCGTGCCACACACACAGGGGCCGGGAAGCCATaGCCATGGGAGAACATGGGA +
Preference number: 4 (lower is better)
Translates to: AESEAPQPCPCLGRATHTGAGKP*PWENMG
Trigger: TCCCATGTTCTCCCATGGTCATGGCTTCCCGGCCCC...TGTGTGTGTGGCACGGCCCAGACAAGGGCAGGGCTGAGGGGCCTCCGACTCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR GCA 90 bp CCAGGCCACATTCGAGCCCGTCTACCCCCAGCTGAGTCGGAGGCCCCTCAGCCCAGGGCACTGTCTGTGTaGGTGGAGGTGTGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: PGHIRARLPPAESEAPQPRALSV*VEVWAE
Trigger: CTCTGCCCACACCTCCACGCACACAGACAGTGCCCT...GGGCTGAGGGGCCTCCGACTCAGCTGGGGGTAGACGGGCTCGAATGTGGCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp CATGGCTTCCCCGCCACCCCCGGCACACAGAGAAGCTGCTTCCATGCCTCTGGATGCAGCGGGGCATCTTaGCACCCCCGTCCTGAGCGG +
Preference number: 4 (lower is better)
Translates to: HGFPATPGTQRSCFHASGCSGAS*HPRPER
Trigger: CCGCTCAGGACGGGGGTGCCAAGATGCCCCGCTGCA...TCCAGAGGCATGGAAGCAGCTTCTCTGTGTGCCGGGGGTGGCGGGGAAGCCATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp CACATTCGAGCCCGTCTACCCCCAGCTGAGTCGGAGGCCCCTCAGCCCTGCCCTCTGCTTCCATGCCTCTaGAGGCCAGGCTGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: HIRARLPPAESEAPQPCPLLPCL*RPGCLA
Trigger: TGCCAGGCAGCCTGGCCTCCAGAGGCATGGAAGCAG...AGGGCAGGGCTGAGGGGCCTCCGACTCAGCTGGGGGTAGACGGGCTCGAATGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp CACGATGAAGGCCACAGTCCCTCCAAAGCCAGCACTCCTGTGCCAAAGCCCCTGGTGCTCGCAGGACGCTaGCACCCCGGGGCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: HDEGHSPSKASTPVPKPLVLAGR*HPGAWD
Trigger: GTCCCAGGCCCCGGGGTGCCAGCGTCCTGCGAGCAC...CAGGGGCTTTGGCACAGGAGTGCTGGCTTTGGAGGGACTGTGGCCTTCATCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp GTGGACTCTAAAGCTGGGCTCTACCCATTCCTCTGCCTGGTTTGCCGGTGGAGGCACCCCGCTGAGCACTaGGGCCCGCATGCGCACGGG +
Preference number: 4 (lower is better)
Translates to: VDSKAGLYPFLCLVCRWRHPAEH*GPHAHG
Trigger: CCCGTGCGCATGCGGGCCGCAGTGCTCAGCGGGGTG...CCTCCACCGGCAAACCAGGCAGAGGAATGGGTAGAGCCCAGCTTTAGAGTCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp CAGCCCTGCGGGCTGGAGCATGGCTTCCCCGCCACCCCCGGCACACAGAGAAGCTGCTCCTGGCGTCAATaGCACGGCCCAGAAACTCAT +
Preference number: 4 (lower is better)
Translates to: QPCGLEHGFPATPGTQRSCSWRQ*HGPETH
Trigger: ATGAGTTTCTGGGCCGTGCCATTGACGCCAGGAGCA...GCTTCTCTGTGTGCCGGGGGTGGCGGGGAAGCCATGCTCCAGCCCGCAGGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp CCAGGCCACATTCGAGCCCGTCTACCCCCAGCTGAGTCGGAGGCCCCTCAGCCCGGAGAGGGTCTGCAGTaGGGAGGGGAAGAGCTTTAC +
Preference number: 4 (lower is better)
Translates to: PGHIRARLPPAESEAPQPGEGLQ*GGEELY
Trigger: GTAAAGCTCTTCCCCTCCCCACTGCAGACCCTCTCC...GGGCTGAGGGGCCTCCGACTCAGCTGGGGGTAGACGGGCTCGAATGTGGCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp TGTCTGTGTGCGTGGAGGTGTGGGCAGAGGACCACGATGAAGGCCACAGTCCCTGGGGGCCGCGCCGCGTaGAAGGCCAACATGACCAGG +
Preference number: 4 (lower is better)
Translates to: CLCAWRCGQRTTMKATVPGGRAA*KANMTR
Trigger: CCTGGTCATGTTGGCCTTCCACGCGGCGCGGCCCCC...AGGGACTGTGGCCTTCATCGTGGTCCTCTGCCCACACCTCCACGCACACAGACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp TGTCTGTGTGCGTGGAGGTGTGGGCAGAGGACCACGATGAAGGCCACAGTCCCTAGCAGGCCCACCACCTaGACGGCCAGCACCACGGCG +
Preference number: 4 (lower is better)
Translates to: CLCAWRCGQRTTMKATVPSRPTT*TASTTA
Trigger: CGCCGTGGTGCTGGCCGTCCAGGTGGTGGGCCTGCT...AGGGACTGTGGCCTTCATCGTGGTCCTCTGCCCACACCTCCACGCACACAGACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp GAAGCTGCTCTGGAGTCCAAGTGGAAAATCTCAGCAGCGCAGCCCTGCGGGCTGCGCAGCCCTGCGGGCTaGAGCATGGCTTCCCCGCCA +
Preference number: 4 (lower is better)
Translates to: EAALESKWKISAAQPCGLRSPAG*SMASPP
Trigger: TGGCGGGGAAGCCATGCTCCAGCCCGCAGGGCTGCG...CAGCCCGCAGGGCTGCGCTGCTGAGATTTTCCACTTGGACTCCAGAGCAGCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp GCTGAGTCGGAGGCCCCTCAGCCCTGCCCTTGTCTGGGCCGTGCCACACACACAAAAACCCAACACCACTaGCGGGCGATGTGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: AESEAPQPCPCLGRATHTKTQHH*RAMWRG
Trigger: GCCCCTCCACATCGCCCGCCAGTGGTGTTGGGTTTT...TGTGTGTGTGGCACGGCCCAGACAAGGGCAGGGCTGAGGGGCCTCCGACTCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR TCA 90 bp GCTGAGTCGGAGGCCCCTCAGCCCTGCCCTTGTCTGGGCCGTGCCACACACACACGAACTGCCACTTCCTaGGACCAAGGACACCGCAGT +
Preference number: 4 (lower is better)
Translates to: AESEAPQPCPCLGRATHTRTATS*DQGHRS
Trigger: ACTGCGGTGTCCTTGGTCTCAGGAAGTGGCAGTTCG...TGTGTGTGTGGCACGGCCCAGACAAGGGCAGGGCTGAGGGGCCTCCGACTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR TCA 90 bp GAAGCTGCTCTGGAGTCCAAGTGGAAAATCTCAGCAGCGCAGCCCTGCGGGCTGGCCGACTCCGCCACGTaGCACGCGTTGACCTGGCTC +
Preference number: 4 (lower is better)
Translates to: EAALESKWKISAAQPCGLADSAT*HALTWL
Trigger: GAGCCAGGTCAACGCGTGTCACGTGGCGGAGTCGGC...CAGCCCGCAGGGCTGCGCTGCTGAGATTTTCCACTTGGACTCCAGAGCAGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR TCA 90 bp GCCACAGTCCCTCCAAAGCCAGCACTCCTGTGCCAAAGCCCCTGCAGGTGCAGGGCTCGATGGCCAGCATaGGCACCAGCTTCCCGATGC +
Preference number: 4 (lower is better)
Translates to: ATVPPKPALLCQSPCRCRARWPA*APASRC
Trigger: GCATCGGGAAGCTGGTGCTCATGCTGGCCATCGAGC...CCTGCACCTGCAGGGGCTTTGGCACAGGAGTGCTGGCTTTGGAGGGACTGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR TCA 90 bp GTGGACTCTAAAGCTGGGCTCTACCCATTCCTCTGCCTGGTTTGCCGGTGGAGGCCGTCTACCCCCAGCTaGGTCGGAGGCCCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: VDSKAGLYPFLCLVCRWRPSTPS*VGGPSA
Trigger: GGCTGAGGGGCCTCCGACTCAGCTGGGGGTAGACGG...CCTCCACCGGCAAACCAGGCAGAGGAATGGGTAGAGCCCAGCTTTAGAGTCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR TCA 90 bp CCAGGCCACATTCGAGCCCGTCTACCCCCAGCTGAGTCGGAGGCCCCTCAGCCCCCATTCTCCTGTGTCTaGGGTTCTCACACAGGCTCC +
Preference number: 4 (lower is better)
Translates to: PGHIRARLPPAESEAPQPPFSCV*GSHTGS
Trigger: GGAGCCTGTGTGAGAACCTCAGACACAGGAGAATGG...GGGCTGAGGGGCCTCCGACTCAGCTGGGGGTAGACGGGCTCGAATGTGGCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000491190.5
CDS-3UTR GCA 90 bp CAGCCCTGCGGGCTGGAGCATGGCTTCCCCGCCACCCCCGGCACACAGAGAAGCAGGAACTTGCGGACGTaGTCAGACCGAAGCCTATCA +
Preference number: 4 (lower is better)
Translates to: QPCGLEHGFPATPGTQRSRNLRT*SDRSLS
Trigger: TGATAGGCTTCGGTCTGAGCACGTCCGCAAGTTCCT...GCTTCTCTGTGTGCCGGGGGTGGCGGGGAAGCCATGCTCCAGCCCGCAGGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp CCAGGCCACATTCGAGCCCGTCTACCCCCAGCTGAGTCGGAGGCCCCTCAGCCCACACCCCAACCAGGGTaGTGTTCATCTTGGACCGCA +
Preference number: 4 (lower is better)
Translates to: PGHIRARLPPAESEAPQPTPQPG*CSSWTA
Trigger: TGCGGTCCAAGATGAACAGCACCCTGGTTGGGGTGT...GGGCTGAGGGGCCTCCGACTCAGCTGGGGGTAGACGGGCTCGAATGTGGCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp GCCACAGTCCCTCCAAAGCCAGCACTCCTGTGCCAAAGCCCCTGCAGGTGCAGGTCCACCTGCTGGGCGTaGAGGTACAGGGCCAGCACA +
Preference number: 4 (lower is better)
Translates to: ATVPPKPALLCQSPCRCRSTCWA*RYRAST
Trigger: TGTGCTGGCCCTGTACCTGCACGCCCAGCAGGTGGA...CCTGCACCTGCAGGGGCTTTGGCACAGGAGTGCTGGCTTTGGAGGGACTGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp GGCACCCCGGGGCCTGGGACAGAGGCCGCTGCCCACCAGCAAAGGCAGAAGCTGTTCTCCTCTGTGGCCTaGAGTTTCCAGAGGAAGTCG +
Preference number: 4 (lower is better)
Translates to: GTPGPGTEAAAHQQRQKLFSSVA*SFQRKS
Trigger: CGACTTCCTCTGGAAACTGCAGGCCACAGAGGAGAA...CAGCTTCTGCCTTTGCTGGTGGGCAGCGGCCTCTGTCCCAGGCCCCGGGGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp GTGTGGGCAGAGGACCACGATGAAGGCCACAGTCCCTCCAAAGCCAGCACTCCTGACGAGGGCCGGAGTTaGGGACGAGACGGGACGGAG +
Preference number: 4 (lower is better)
Translates to: VWAEDHDEGHSPSKASTPDEGRS*GRDGTE
Trigger: CTCCGTCCCGTCTCGTCCGCAACTCCGGCCCTCGTC...AGGAGTGCTGGCTTTGGAGGGACTGTGGCCTTCATCGTGGTCCTCTGCCCACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR GCA 90 bp TGTCTGTGTGCGTGGAGGTGTGGGCAGAGGACCACGATGAAGGCCACAGTCCCTAGGGACTGGTCTGGCTaGTGCTGCGCCGCACGCGGA +
Preference number: 4 (lower is better)
Translates to: CLCAWRCGQRTTMKATVPRDWSG*CCAARG
Trigger: TCCGCGTGCGGCGCAGCAGCAGCCAGACCAGTCCCT...AGGGACTGTGGCCTTCATCGTGGTCCTCTGCCCACACCTCCACGCACACAGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR GCA 90 bp CTGCAAAGCACCTGGCCTTCTGTAAGCACTCTGGAATCTGTGGGCGCTGCCTCTCTGGCCAGGCGCTGCTaGTGCTGCGGGGTCACCGCC +
Preference number: 4 (lower is better)
Translates to: LQSTWPSVSTLESVGAASLARRC*CCGVTA
Trigger: GGCGGTGACCCCGCAGCAGCAGCAGCGCCTGGCCAG...AGAGGCAGCGCCCACAGATTCCAGAGTGCTTACAGAAGGCCAGGTGCTTTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR GCA 90 bp CCAGGCCACATTCGAGCCCGTCTACCCCCAGCTGAGTCGGAGGCCCCTCAGCCCTTGGAGCGGAATATCTaGAGCAACGCCAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PGHIRARLPPAESEAPQPLERNI*SNARQQ
Trigger: CTGCTGCCTGGCGTTGCTGCAGATATTCCGCTCCAA...GGGCTGAGGGGCCTCCGACTCAGCTGGGGGTAGACGGGCTCGAATGTGGCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp CTGCTCTGGAGTCCAAGTGGAAAATCTCAGCAGCGCAGCCCTGCGGGCTGGAGCGAGTGGAGCCGCGCCTaGATGCACTCTCGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: LLWSPSGKSQQRSPAGWSEWSRA*MHSRVS
Trigger: GGAGACCCGAGAGTGCATCCAGGCGCGGCTCCACTC...GCTCCAGCCCGCAGGGCTGCGCTGCTGAGATTTTCCACTTGGACTCCAGAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp GTGTGGGCAGAGGACCACGATGAAGGCCACAGTCCCTCCAAAGCCAGCACTCCTTGGTGCGCAGGGCGATaGCCAGGTGGAGGGCGGACA +
Preference number: 4 (lower is better)
Translates to: VWAEDHDEGHSPSKASTPWCAGR*PGGGRT
Trigger: TGTCCGCCCTCCACCTGGCCATCGCCCTGCGCACCA...AGGAGTGCTGGCTTTGGAGGGACTGTGGCCTTCATCGTGGTCCTCTGCCCACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp CATGGCTTCCCCGCCACCCCCGGCACACAGAGAAGCTGCTTCCATGCCTCTGGACTGCTTCCATGCCTCTaGAGGCCAGGCTGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: HGFPATPGTQRSCFHASGLLPCL*RPGCLA
Trigger: TGCCAGGCAGCCTGGCCTCCAGAGGCATGGAAGCAG...TCCAGAGGCATGGAAGCAGCTTCTCTGTGTGCCGGGGGTGGCGGGGAAGCCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp CTGGAGCATGGCTTCCCCGCCACCCCCGGCACACAGAGAAGCTGCTTCCATGCCCACTGTCTGTGTGCGTaGAGGTGTGGGCAGAGGACC +
Preference number: 4 (lower is better)
Translates to: LEHGFPATPGTQRSCFHAHCLCA*RCGQRT
Trigger: GGTCCTCTGCCCACACCTCCACGCACACAGACAGTG...GGCATGGAAGCAGCTTCTCTGTGTGCCGGGGGTGGCGGGGAAGCCATGCTCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp ACGATGAAGGCCACAGTCCCTCCAAAGCCAGCACTCCTGTGCCAAAGCCCCTGCGGCGTGGTCAGCCCTTaGTTCAGGCAGCCCCGAGAC +
Preference number: 4 (lower is better)
Translates to: TMKATVPPKPALLCQSPCGVVSP*FRQPRD
Trigger: GTCTCGGGGCTGCCTGAAGCAAGGGCTGACCACGCC...GCAGGGGCTTTGGCACAGGAGTGCTGGCTTTGGAGGGACTGTGGCCTTCATCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp CATGGCTTCCCCGCCACCCCCGGCACACAGAGAAGCTGCTTCCATGCCTCTGGAGCCACCTTGGTTGCATaGTCAGGGCACTGGGAGGTC +
Preference number: 4 (lower is better)
Translates to: HGFPATPGTQRSCFHASGATLVA*SGHWEV
Trigger: GACCTCCCAGTGCCCTGAGCATGCAACCAAGGTGGC...TCCAGAGGCATGGAAGCAGCTTCTCTGTGTGCCGGGGGTGGCGGGGAAGCCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR GCA 90 bp CAGAGGACCACGATGAAGGCCACAGTCCCTCCAAAGCCAGCACTCCTGTGCCAATGGTCTGGCTGCTGCTaGGCCGCACGCGGAGAGACG +
Preference number: 4 (lower is better)
Translates to: QRTTMKATVPPKPALLCQWSGCC*AARGET
Trigger: CGTCTCTCCGCGTGCGGCGCAGCAGCAGCCAGACCA...TTGGCACAGGAGTGCTGGCTTTGGAGGGACTGTGGCCTTCATCGTGGTCCTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR GCA 90 bp TCCAAAGCCAGCACTCCTGTGCCAAAGCCCCTGCAGGTGCAGGGTGGTGGCCTGGAGAAGCTGCTTCCATaGCTCTGGAGGCCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: SKASTPVPKPLQVQGGGLEKLLP*LWRPGC
Trigger: GCAGCCTGGCCTCCAGAGGCATGGAAGCAGCTTCTC...CAGGCCACCACCCTGCACCTGCAGGGGCTTTGGCACAGGAGTGCTGGCTTTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp GGCACCCCGGGGCCTGGGACAGAGGCCGCTGCCCACCAGCAAAGGCAGAAGCTGAGCAAAGGCAGAAGCTaGTCTGGAGTCCAAGTGGAA +
Preference number: 4 (lower is better)
Translates to: GTPGPGTEAAAHQQRQKLSKGRS*SGVQVE
Trigger: TTCCACTTGGACTCCAGAGCAGCTTCTGCCTTTGCT...CAGCTTCTGCCTTTGCTGGTGGGCAGCGGCCTCTGTCCCAGGCCCCGGGGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp CCAAAGCCAGCACTCCTGTGCCAAAGCCCCTGCAGGTGCAGGGTGGTGGCCTGTCCCTTGTCTGGGCCGTaGCACACACACATTCCCACG +
Preference number: 4 (lower is better)
Translates to: PKPALLCQSPCRCRVVACPLSGP*HTHIPT
Trigger: CGTGGGAATGTGTGTGTGGCACGGCCCAGACAAGGG...ACAGGCCACCACCCTGCACCTGCAGGGGCTTTGGCACAGGAGTGCTGGCTTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp TTGGTGTGCGGGGAGGGGAGGGTGGTGCTAGAGCCCAGTGAGAGGTGGTACAGGACACAGCAGTGGGCGTaGTCAGCCCTTGCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: LVCGEGRVVLEPSERWYRTQQWA*SALASG
Trigger: GCCTGAAGCAAGGGCTGACCACGCCCACTGCTGTGT...CCTGTACCACCTCTCACTGGGCTCTAGCACCACCCTCCCCTCCCCGCACACCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp GCAGCGCAGCCCTGCGGGCTGGAGCATGGCTTCCCCGCCACCCCCGGCACACAGGGTCGTCTACCTGCTTaGAGTACTTCTTCTCTAAGT +
Preference number: 4 (lower is better)
Translates to: AAQPCGLEHGFPATPGTQGRLPA*STSSLS
Trigger: ACTTAGAGAAGAAGTACTCCAAGCAGGTAGACGACC...CTGTGTGCCGGGGGTGGCGGGGAAGCCATGCTCCAGCCCGCAGGGCTGCGCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp TTGGTGTGCGGGGAGGGGAGGGTGGTGCTAGAGCCCAGTGAGAGGTGGTACAGGACCGCACGATCTTCCTaGAGAGGGTCTGCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: LVCGEGRVVLEPSERWYRTARSS*RGSAVG
Trigger: CCCCACTGCAGACCCTCTCCAGGAAGATCGTGCGGT...CCTGTACCACCTCTCACTGGGCTCTAGCACCACCCTCCCCTCCCCGCACACCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp GCCACAGTCCCTCCAAAGCCAGCACTCCTGTGCCAAAGCCCCTGCAGGTGCAGGACCGCACGATCTTCCTaGAGAGGGTCTGCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: ATVPPKPALLCQSPCRCRTARSS*RGSAVG
Trigger: CCCCACTGCAGACCCTCTCCAGGAAGATCGTGCGGT...CCTGCACCTGCAGGGGCTTTGGCACAGGAGTGCTGGCTTTGGAGGGACTGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp CACATTCGAGCCCGTCTACCCCCAGCTGAGTCGGAGGCCCCTCAGCCCTGCCCTTTGGCAGCCAGCACCTaGTACATGTCTGTGGTGACC +
Preference number: 4 (lower is better)
Translates to: HIRARLPPAESEAPQPCPLAAST*YMSVVT
Trigger: GGTCACCACAGACATGTACCAGGTGCTGGCTGCCAA...AGGGCAGGGCTGAGGGGCCTCCGACTCAGCTGGGGGTAGACGGGCTCGAATGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp CTGCTCTGGAGTCCAAGTGGAAAATCTCAGCAGCGCAGCCCTGCGGGCTGGAGCGAGTTGCCTCCGAGGTaGGGTCGCAGGGACTGGTCT +
Preference number: 4 (lower is better)
Translates to: LLWSPSGKSQQRSPAGWSELPPR*GRRDWS
Trigger: AGACCAGTCCCTGCGACCCCACCTCGGAGGCAACTC...GCTCCAGCCCGCAGGGCTGCGCTGCTGAGATTTTCCACTTGGACTCCAGAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp CACGATGAAGGCCACAGTCCCTCCAAAGCCAGCACTCCTGTGCCAAAGCCCCTGAGCAGGAACTGGTCCTaGGCGTTGGTGCGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: HDEGHSPSKASTPVPKPLSRNWS*ALVRRA
Trigger: CGCCCTGCGCACCAACGCCCAGGACCAGTTCCTGCT...CAGGGGCTTTGGCACAGGAGTGCTGGCTTTGGAGGGACTGTGGCCTTCATCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp CTGCTCTGGAGTCCAAGTGGAAAATCTCAGCAGCGCAGCCCTGCGGGCTGGAGCGGAGGCCAGGCTGCCTaGCACCATTGGCCAACAGCT +
Preference number: 4 (lower is better)
Translates to: LLWSPSGKSQQRSPAGWSGGQAA*HHWPTA
Trigger: AGCTGTTGGCCAATGGTGCCAGGCAGCCTGGCCTCC...GCTCCAGCCCGCAGGGCTGCGCTGCTGAGATTTTCCACTTGGACTCCAGAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp CTGGAGCATGGCTTCCCCGCCACCCCCGGCACACAGAGAAGCTGCTTCCATGCCACATCTTTGGTCAGCTaGGTGCTCGCAGGACGCTGG +
Preference number: 4 (lower is better)
Translates to: LEHGFPATPGTQRSCFHATSLVS*VLAGRW
Trigger: CCAGCGTCCTGCGAGCACCCAGCTGACCAAAGATGT...GGCATGGAAGCAGCTTCTCTGTGTGCCGGGGGTGGCGGGGAAGCCATGCTCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp GGCACCCCGGGGCCTGGGACAGAGGCCGCTGCCCACCAGCAAAGGCAGAAGCTGCACCCACTGCTCTGGTaGTACCTTGGAAAACCCAAA +
Preference number: 4 (lower is better)
Translates to: GTPGPGTEAAAHQQRQKLHPLLW*YLGKPK
Trigger: TTTGGGTTTTCCAAGGTACCACCAGAGCAGTGGGTG...CAGCTTCTGCCTTTGCTGGTGGGCAGCGGCCTCTGTCCCAGGCCCCGGGGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp CCAGGCCACATTCGAGCCCGTCTACCCCCAGCTGAGTCGGAGGCCCCTCAGCCCACACACCCACTGCTCTaGTGGTACCTTGGAAAACCC +
Preference number: 4 (lower is better)
Translates to: PGHIRARLPPAESEAPQPTHPLL*WYLGKP
Trigger: GGGTTTTCCAAGGTACCACCAGAGCAGTGGGTGTGT...GGGCTGAGGGGCCTCCGACTCAGCTGGGGGTAGACGGGCTCGAATGTGGCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp CAGCCCTGCGGGCTGGAGCATGGCTTCCCCGCCACCCCCGGCACACAGAGAAGCGGAAAGATTTGGGCATaGGCCCTAAGGATTCCACTG +
Preference number: 4 (lower is better)
Translates to: QPCGLEHGFPATPGTQRSGKIWA*ALRIPL
Trigger: CAGTGGAATCCTTAGGGCCCATGCCCAAATCTTTCC...GCTTCTCTGTGTGCCGGGGGTGGCGGGGAAGCCATGCTCCAGCCCGCAGGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR TCA 90 bp CTGGAGCATGGCTTCCCCGCCACCCCCGGCACACAGAGAAGCTGCTTCCATGCCTGTACTCGCCCGCTGTaGATTCCCACACGCATGTTC +
Preference number: 4 (lower is better)
Translates to: LEHGFPATPGTQRSCFHACTRPL*IPTRMF
Trigger: GAACATGCGTGTGGGAATTCACAGCGGGCGAGTACA...GGCATGGAAGCAGCTTCTCTGTGTGCCGGGGGTGGCGGGGAAGCCATGCTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR TCA 90 bp GACTCTAAAGCTGGGCTCTACCCATTCCTCTGCCTGGTTTGCCGGTGGAGGTCAGCCGACTCCGCCACGTaGCACGCGTTGACCTGGCTC +
Preference number: 4 (lower is better)
Translates to: DSKAGLYPFLCLVCRWRSADSAT*HALTWL
Trigger: GAGCCAGGTCAACGCGTGTCACGTGGCGGAGTCGGC...TGACCTCCACCGGCAAACCAGGCAGAGGAATGGGTAGAGCCCAGCTTTAGAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR TCA 90 bp GTGTGGGCAGAGGACCACGATGAAGGCCACAGTCCCTCCAAAGCCAGCACTCCTGCTCGATGGCCAGCATaGGCACCAGCTTCCCGATGC +
Preference number: 4 (lower is better)
Translates to: VWAEDHDEGHSPSKASTPARWPA*APASRC
Trigger: GCATCGGGAAGCTGGTGCTCATGCTGGCCATCGAGC...AGGAGTGCTGGCTTTGGAGGGACTGTGGCCTTCATCGTGGTCCTCTGCCCACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR TCA 90 bp GCCACAGTCCCTCCAAAGCCAGCACTCCTGTGCCAAAGCCCCTGCAGGTGCAGGGCGGGGGCCCTCCATTaGGGAAGTAGGTCATCATCT +
Preference number: 4 (lower is better)
Translates to: ATVPPKPALLCQSPCRCRAGALH*GSRSSS
Trigger: AGATGATGACCTACTTCCTCAATGGAGGGCCCCCGC...CCTGCACCTGCAGGGGCTTTGGCACAGGAGTGCTGGCTTTGGAGGGACTGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp GCTGAGTCGGAGGCCCCTCAGCCCTGCCCTTGTCTGGGCCGTGCCACACACACAACCGAAGCCTATCAATaGTCCTGGCGTCAATGGCAC +
Preference number: 4 (lower is better)
Translates to: AESEAPQPCPCLGRATHTTEAYQ*SWRQWH
Trigger: GTGCCATTGACGCCAGGAGCATTGATAGGCTTCGGT...TGTGTGTGTGGCACGGCCCAGACAAGGGCAGGGCTGAGGGGCCTCCGACTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp GAAGCTGCTCTGGAGTCCAAGTGGAAAATCTCAGCAGCGCAGCCCTGCGGGCTGGCAGTGGACTCCACCTaGTGGGCGTGCAGGTACAGG +
Preference number: 4 (lower is better)
Translates to: EAALESKWKISAAQPCGLAVDST*WACRYR
Trigger: CCTGTACCTGCACGCCCAGCAGGTGGAGTCCACTGC...CAGCCCGCAGGGCTGCGCTGCTGAGATTTTCCACTTGGACTCCAGAGCAGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp GGAGGGTGTGTGCATGTGTGTACATACGTGTGCGTGTGTCAGAAAAGATGGGGCTCGCCGCCGCGCTCCTaGCAGGCGGACTTGGAGCGG +
Preference number: 4 (lower is better)
Translates to: GGCVHVCTYVCVCQKRWGSPPRS*QADLER
Trigger: CCGCTCCAAGTCCGCCTGGCAGGAGCGCGGCGGCGA...GCCCCATCTTTTCTGACACACGCACACGTATGTACACACATGCACACACCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR GCA 90 bp CACCAGCAAAGGCAGAAGCTGCTCTGGAGTCCAAGTGGAAAATCTCAGCAGCGCGCACTGCGGCCCGCATaGGCACGGGCAGCAGCGTGT +
Preference number: 4 (lower is better)
Translates to: HQQRQKLLWSPSGKSQQRALRPA*ARAAAC
Trigger: ACACGCTGCTGCCCGTGCGCATGCGGGCCGCAGTGC...GCGCTGCTGAGATTTTCCACTTGGACTCCAGAGCAGCTTCTGCCTTTGCTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR GCA 90 bp GTGTGGGCAGAGGACCACGATGAAGGCCACAGTCCCTCCAAAGCCAGCACTCCTCTCTGGAGGCCAGGCTaGCTGGCACCATTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: VWAEDHDEGHSPSKASTPLWRPG*LAPLAN
Trigger: GTTGGCCAATGGTGCCAGGCAGCCTGGCCTCCAGAG...AGGAGTGCTGGCTTTGGAGGGACTGTGGCCTTCATCGTGGTCCTCTGCCCACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp GTGTGGGCAGAGGACCACGATGAAGGCCACAGTCCCTCCAAAGCCAGCACTCCTCAAAGCCCCTGCAGGTaGAGGGTGGTGGCCTGTCTG +
Preference number: 4 (lower is better)
Translates to: VWAEDHDEGHSPSKASTPQSPCR*RVVACL
Trigger: CAGACAGGCCACCACCCTGCACCTGCAGGGGCTTTG...AGGAGTGCTGGCTTTGGAGGGACTGTGGCCTTCATCGTGGTCCTCTGCCCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp GTGGACTCTAAAGCTGGGCTCTACCCATTCCTCTGCCTGGTTTGCCGGTGGAGGCTGTGCCAAAGCCCCTaGAGGTGCAGGGTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: VDSKAGLYPFLCLVCRWRLCQSP*RCRVVA
Trigger: GGCCACCACCCTGCACCTGCAGGGGCTTTGGCACAG...CCTCCACCGGCAAACCAGGCAGAGGAATGGGTAGAGCCCAGCTTTAGAGTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR GCA 90 bp GCTGAGTCGGAGGCCCCTCAGCCCTGCCCTTGTCTGGGCCGTGCCACACACACAAGAATCACCACTCCTTaGTTGGCGTCCTCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: AESEAPQPCPCLGRATHTRITTP*LASSCL
Trigger: GAGGCAAGAGGACGCCAAGCAAGGAGTGGTGATTCT...TGTGTGTGTGGCACGGCCCAGACAAGGGCAGGGCTGAGGGGCCTCCGACTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp GCCACAGTCCCTCCAAAGCCAGCACTCCTGTGCCAAAGCCCCTGCAGGTGCAGGCCCGGACCAACGAGATaGCCTCGATCATGTCCATGC +
Preference number: 4 (lower is better)
Translates to: ATVPPKPALLCQSPCRCRPGPTR*PRSCPC
Trigger: GCATGGACATGATCGAGGCCATCTCGTTGGTCCGGG...CCTGCACCTGCAGGGGCTTTGGCACAGGAGTGCTGGCTTTGGAGGGACTGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp CAGCCCTGCGGGCTGGAGCATGGCTTCCCCGCCACCCCCGGCACACAGAGAAGCTCATCTTGGCGATCATaGCCTTCTCTTCTTTCCGCT +
Preference number: 4 (lower is better)
Translates to: QPCGLEHGFPATPGTQRSSSWRS*PSLLSA
Trigger: AGCGGAAAGAAGAGAAGGCCATGATCGCCAAGATGA...GCTTCTCTGTGTGCCGGGGGTGGCGGGGAAGCCATGCTCCAGCCCGCAGGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp CCAAAGCCAGCACTCCTGTGCCAAAGCCCCTGCAGGTGCAGGGTGGTGGCCTGTGAAGAGCGTGACACCTaGCACCTCCACGATGAGCAC +
Preference number: 4 (lower is better)
Translates to: PKPALLCQSPCRCRVVACEERDT*HLHDEH
Trigger: GTGCTCATCGTGGAGGTGCCAGGTGTCACGCTCTTC...ACAGGCCACCACCCTGCACCTGCAGGGGCTTTGGCACAGGAGTGCTGGCTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp TCCAAAGCCAGCACTCCTGTGCCAAAGCCCCTGCAGGTGCAGGGTGGTGGCCTGGCATGCTCAGGGCACTaGGAGGTCCCGTTGTTGAAG +
Preference number: 4 (lower is better)
Translates to: SKASTPVPKPLQVQGGGLACSGH*EVPLLK
Trigger: CTTCAACAACGGGACCTCCCAGTGCCCTGAGCATGC...CAGGCCACCACCCTGCACCTGCAGGGGCTTTGGCACAGGAGTGCTGGCTTTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp GTGTGGGCAGAGGACCACGATGAAGGCCACAGTCCCTCCAAAGCCAGCACTCCTGGATGGAGGGGACCATaGGCACCTCAGCAGGGATCC +
Preference number: 4 (lower is better)
Translates to: VWAEDHDEGHSPSKASTPGWRGP*APQQGS
Trigger: GGATCCCTGCTGAGGTGCCCATGGTCCCCTCCATCC...AGGAGTGCTGGCTTTGGAGGGACTGTGGCCTTCATCGTGGTCCTCTGCCCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491190.5
CDS-3UTR CCA 90 bp GTGTGGGCAGAGGACCACGATGAAGGCCACAGTCCCTCCAAAGCCAGCACTCCTTCCGTGGGACAGGCCTaGGCCCTACCCAGCACTACA +
Preference number: 4 (lower is better)
Translates to: VWAEDHDEGHSPSKASTPSVGQA*ALPSTT
Trigger: TGTAGTGCTGGGTAGGGCCCAGGCCTGTCCCACGGA...AGGAGTGCTGGCTTTGGAGGGACTGTGGCCTTCATCGTGGTCCTCTGCCCACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491190.5
CDS-3UTR TCA 90 bp TTGGCGTCCTCTTGCCTCCCCCTCGTAATTAGTTCTGTTTCCCTCCTAGGGCACCGCCCAGGCTGTAGTTaGCGGCCGACTCCGCCACGT +
Preference number: 4 (lower is better)
Translates to: LASSCLPLVISSVSLLGHRPGCS*RPTPPR
Trigger: ACGTGGCGGAGTCGGCCGTCAACTACAGCCTGGGCG...GTGCCCTAGGAGGGAAACAGAACTAATTACGAGGGGGAGGCAAGAGGACGCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR TCA 90 bp CTGCTCTGGAGTCCAAGTGGAAAATCTCAGCAGCGCAGCCCTGCGGGCTGGAGCGCAGCACGCTGTAGGTaGAGTACTCGGGGAAGTTGC +
Preference number: 4 (lower is better)
Translates to: LLWSPSGKSQQRSPAGWSAARCR*STRGSC
Trigger: GCAACTTCCCCGAGTACTTCACCTACAGCGTGCTGC...GCTCCAGCCCGCAGGGCTGCGCTGCTGAGATTTTCCACTTGGACTCCAGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR TCA 90 bp GAAGCTGCTCTGGAGTCCAAGTGGAAAATCTCAGCAGCGCAGCCCTGCGGGCTGCGTTGTCGAAGAGCGTaGCACCTGGCACCTCCACGA +
Preference number: 4 (lower is better)
Translates to: EAALESKWKISAAQPCGLRCRRA*HLAPPR
Trigger: TCGTGGAGGTGCCAGGTGTCACGCTCTTCGACAACG...CAGCCCGCAGGGCTGCGCTGCTGAGATTTTCCACTTGGACTCCAGAGCAGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR TCA 90 bp CCAAAGCCAGCACTCCTGTGCCAAAGCCCCTGCAGGTGCAGGGTGGTGGCCTGTGGCCAGCACAAAGACTaGGATGATGATGGGCGTCAC +
Preference number: 4 (lower is better)
Translates to: PKPALLCQSPCRCRVVACGQHKD*DDDGRH
Trigger: GTGACGCCCATCATCATCTCAGTCTTTGTGCTGGCC...ACAGGCCACCACCCTGCACCTGCAGGGGCTTTGGCACAGGAGTGCTGGCTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR TCA 90 bp TGTGCGTGGAGGTGTGGGCAGAGGACCACGATGAAGGCCACAGTCCCTCCAAAGAGTCGGCCAGTGCCTTaGTGTGGGTCTTGCCCACCT +
Preference number: 4 (lower is better)
Translates to: CAWRCGQRTTMKATVPPKSRPVP*CGSCPP
Trigger: AGGTGGGCAAGACCCACATCAAGGCACTGGCCGACT...CTTTGGAGGGACTGTGGCCTTCATCGTGGTCCTCTGCCCACACCTCCACGCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR TCA 90 bp CACGATGAAGGCCACAGTCCCTCCAAAGCCAGCACTCCTGTGCCAAAGCCCCTGCCCCTCCCCTCATCATaGTTCCAGGCCCTCCATGCA +
Preference number: 4 (lower is better)
Translates to: HDEGHSPSKASTPVPKPLPLPSS*FQALHA
Trigger: TGCATGGAGGGCCTGGAATCATGATGAGGGGAGGGG...CAGGGGCTTTGGCACAGGAGTGCTGGCTTTGGAGGGACTGTGGCCTTCATCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000491190.5
CDS-3UTR TCA 90 bp CATGGCTTCCCCGCCACCCCCGGCACACAGAGAAGCTGCTTCCATGCCTCTGGAGAGGTGAGAAGTAGCTaGGGATCCGCGTCAGAAGTC +
Preference number: 4 (lower is better)
Translates to: HGFPATPGTQRSCFHASGEVRSS*GSASEV
Trigger: GACTTCTGACGCGGATCCTCAGCTACTTCTCACCTC...TCCAGAGGCATGGAAGCAGCTTCTCTGTGTGCCGGGGGTGGCGGGGAAGCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR TCA 90 bp CACATTCGAGCCCGTCTACCCCCAGCTGAGTCGGAGGCCCCTCAGCCCTGCCCTGGGTGGTGGCCTGTCTaGAGTTTAAAGGCTCACATA +
Preference number: 4 (lower is better)
Translates to: HIRARLPPAESEAPQPCPGWWPV*SLKAHI
Trigger: TATGTGAGCCTTTAAACTTCAGACAGGCCACCACCC...AGGGCAGGGCTGAGGGGCCTCCGACTCAGCTGGGGGTAGACGGGCTCGAATGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp CAAAGGCAGAAGCTGCTCTGGAGTCCAAGTGGAAAATCTCAGCAGCGCAGCCCTTGCTGGTTCTCCCGCTaGGAGTGGAGCCGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: QRQKLLWSPSGKSQQRSPCWFSR*EWSRAW
Trigger: CCAGGCGCGGCTCCACTCGCAGCGGGAGAACCAGCA...AGGGCTGCGCTGCTGAGATTTTCCACTTGGACTCCAGAGCAGCTTCTGCCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp GTCTTCTACAGAGGGAAACATCTTTGGTCAGCTGGGTGCTCGCAGGACGCTGGCGGCGTGGTCAGCCCTTaGTTCAGGCAGCCCCGAGAC +
Preference number: 4 (lower is better)
Translates to: VFYRGKHLWSAGCSQDAGGVVSP*FRQPRD
Trigger: GTCTCGGGGCTGCCTGAAGCAAGGGCTGACCACGCC...GCCAGCGTCCTGCGAGCACCCAGCTGACCAAAGATGTTTCCCTCTGTAGAAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp TTGGTGTGCGGGGAGGGGAGGGTGGTGCTAGAGCCCAGTGAGAGGTGGTACAGGCAGTGTGGTGGGTTGTaGCCGATGGAGTTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: LVCGEGRVVLEPSERWYRQCGGL*PMELVL
Trigger: GAGAACCAACTCCATCGGGCACAACCCACCACACTG...CCTGTACCACCTCTCACTGGGCTCTAGCACCACCCTCCCCTCCCCGCACACCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR GCA 90 bp TCCAAAGCCAGCACTCCTGTGCCAAAGCCCCTGCAGGTGCAGGGTGGTGGCCTGACACCCCAACCAGGGTaGTGTTCATCTTGGACCGCA +
Preference number: 4 (lower is better)
Translates to: SKASTPVPKPLQVQGGGLTPQPG*CSSWTA
Trigger: TGCGGTCCAAGATGAACAGCACCCTGGTTGGGGTGT...CAGGCCACCACCCTGCACCTGCAGGGGCTTTGGCACAGGAGTGCTGGCTTTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp ACGATGAAGGCCACAGTCCCTCCAAAGCCAGCACTCCTGTGCCAAAGCCCCTGCCCGATGCAGCTGATCTaGAGGAACACGGAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: TMKATVPPKPALLCQSPCPMQLI*RNTEQA
Trigger: GGCCTGCTCCGTGTTCCTGCAGATCAGCTGCATCGG...GCAGGGGCTTTGGCACAGGAGTGCTGGCTTTGGAGGGACTGTGGCCTTCATCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp CAGCAAAGGCAGAAGCTGCTCTGGAGTCCAAGTGGAAAATCTCAGCAGCGCAGCGACTGGTCTGGCTGCTaGTGCGCCGCACGCGGAGAG +
Preference number: 4 (lower is better)
Translates to: QQRQKLLWSPSGKSQQRSDWSGC*CAARGE
Trigger: CTCTCCGCGTGCGGCGCAGCAGCAGCCAGACCAGTC...GCTGCGCTGCTGAGATTTTCCACTTGGACTCCAGAGCAGCTTCTGCCTTTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR GCA 90 bp CTGGAATCTGTGGGCGCTGCCTCTGTAAGCCGCAAACGTCTGAAATCTCAGGGTGGTCCTGGGCGTTGGTaGGCAGGGCGATGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: LESVGAASVSRKRLKSQGGPGRW*AGRWPG
Trigger: ACCTGGCCATCGCCCTGCGCACCAACGCCCAGGACC...ACCCTGAGATTTCAGACGTTTGCGGCTTACAGAGGCAGCGCCCACAGATTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR GCA 90 bp GCCACAGTCCCTCCAAAGCCAGCACTCCTGTGCCAAAGCCCCTGCAGGTGCAGGCGCAAACCTGAAGGCTaGACATTGCATCCCCCAGTC +
Preference number: 4 (lower is better)
Translates to: ATVPPKPALLCQSPCRCRRKPEG*TLHPPV
Trigger: GACTGGGGGATGCAATGTGCAGCCTTCAGGTTTGCG...CCTGCACCTGCAGGGGCTTTGGCACAGGAGTGCTGGCTTTGGAGGGACTGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp CACATTCGAGCCCGTCTACCCCCAGCTGAGTCGGAGGCCCCTCAGCCCTGCCCTTCTGGCGGTTCATCTTaGCGATCATGGCCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: HIRARLPPAESEAPQPCPSGGSS*RSWPSL
Trigger: AAGAGAAGGCCATGATCGCCAAGATGAACCGCCAGA...AGGGCAGGGCTGAGGGGCCTCCGACTCAGCTGGGGGTAGACGGGCTCGAATGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp GCCACAGTCCCTCCAAAGCCAGCACTCCTGTGCCAAAGCCCCTGCAGGTGCAGGTCCGCTTCATCTCCTTaGACACCTGGTTGCCACCCA +
Preference number: 4 (lower is better)
Translates to: ATVPPKPALLCQSPCRCRSASSP*TPGCHP
Trigger: TGGGTGGCAACCAGGTGTCCAAGGAGATGAAGCGGA...CCTGCACCTGCAGGGGCTTTGGCACAGGAGTGCTGGCTTTGGAGGGACTGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp CACGATGAAGGCCACAGTCCCTCCAAAGCCAGCACTCCTGTGCCAAAGCCCCTGTGCCTGGTTTGCCGGTaGAGGTCAAGGCCACTCCCT +
Preference number: 4 (lower is better)
Translates to: HDEGHSPSKASTPVPKPLCLVCR*RSRPLP
Trigger: AGGGAGTGGCCTTGACCTCCACCGGCAAACCAGGCA...CAGGGGCTTTGGCACAGGAGTGCTGGCTTTGGAGGGACTGTGGCCTTCATCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR CAA 72 bp TGTGGAGGGCACCACACTGCCTGTCGCAGGATGAGATaGCTTCCCTTGGTTCCAGCTCGGCCTGGGATGGGA +
Preference number: 4 (lower is better)
Translates to: CGGHHTACRRMR*LPLVPARPGMG
Trigger: TCCCATCCCAGGCCGAGCTGGAACCAAGGGAAGCAATCTCATCCTGCGACAGGCAGTGTGGTGCCCTCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR TCA 90 bp CATGGCTTCCCCGCCACCCCCGGCACACAGAGAAGCTGCTTCCATGCCTCTGGACCTCCTGCTTGGCGTTaGTGTCTGCTTTCATCTCCA +
Preference number: 4 (lower is better)
Translates to: HGFPATPGTQRSCFHASGPPAWR*CLLSSP
Trigger: TGGAGATGAAAGCAGACATCAACGCCAAGCAGGAGG...TCCAGAGGCATGGAAGCAGCTTCTCTGTGTGCCGGGGGTGGCGGGGAAGCCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR TCA 90 bp CACGATGAAGGCCACAGTCCCTCCAAAGCCAGCACTCCTGTGCCAAAGCCCCTGGCAGCACGCTGTAGGTaGAGTACTCGGGGAAGTTGC +
Preference number: 4 (lower is better)
Translates to: HDEGHSPSKASTPVPKPLAARCR*STRGSC
Trigger: GCAACTTCCCCGAGTACTTCACCTACAGCGTGCTGC...CAGGGGCTTTGGCACAGGAGTGCTGGCTTTGGAGGGACTGTGGCCTTCATCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR TCA 90 bp CAGAGGACCACGATGAAGGCCACAGTCCCTCCAAAGCCAGCACTCCTGTGCCAACGTTGTCGAAGAGCGTaGCACCTGGCACCTCCACGA +
Preference number: 4 (lower is better)
Translates to: QRTTMKATVPPKPALLCQRCRRA*HLAPPR
Trigger: TCGTGGAGGTGCCAGGTGTCACGCTCTTCGACAACG...TTGGCACAGGAGTGCTGGCTTTGGAGGGACTGTGGCCTTCATCGTGGTCCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR TCA 90 bp CACCACTGGCGGGCGATGTGGAGGGGCAGGGAACTTGAGAACAACAGCTGGAAGGCGGGGGCCCTCCATTaGGGAAGTAGGTCATCATCT +
Preference number: 4 (lower is better)
Translates to: HHWRAMWRGRELENNSWKAGALH*GSRSSS
Trigger: AGATGATGACCTACTTCCTCAATGGAGGGCCCCCGC...CTTCCAGCTGTTGTTCTCAAGTTCCCTGCCCCTCCACATCGCCCGCCAGTGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR TCA 90 bp GGAGGGTGTGTGCATGTGTGTACATACGTGTGCGTGTGTCAGAAAAGATGGGGCTTGGCACCCCCGTCCTaGGCGGAGGAGGAGGGCACA +
Preference number: 4 (lower is better)
Translates to: GGCVHVCTYVCVCQKRWGLAPPS*AEEEGT
Trigger: TGTGCCCTCCTCCTCCGCTCAGGACGGGGGTGCCAA...GCCCCATCTTTTCTGACACACGCACACGTATGTACACACATGCACACACCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR TCA 90 bp TGCTTGGCGTCCTCTTGCCTCCCCCTCGTAATTAGTTCTGTTTCCCTCCTAGGGACTTGGAGCGGAAGCTaGAGCCGAAGCCCCCGGCCA +
Preference number: 4 (lower is better)
Translates to: CLASSCLPLVISSVSLLGTWSGS*SRSPRP
Trigger: TGGCCGGGGGCTTCGGCTTCAGCTTCCGCTCCAAGT...CCCTAGGAGGGAAACAGAACTAATTACGAGGGGGAGGCAAGAGGACGCCAAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR TCA 90 bp GCTGAGTCGGAGGCCCCTCAGCCCTGCCCTTGTCTGGGCCGTGCCACACACACATGTAGATGGTGTAGATaGAGAACACGGTCCACCAGA +
Preference number: 4 (lower is better)
Translates to: AESEAPQPCPCLGRATHTCRWCR*RTRSTR
Trigger: TCTGGTGGACCGTGTTCTTCATCTACACCATCTACA...TGTGTGTGTGGCACGGCCCAGACAAGGGCAGGGCTGAGGGGCCTCCGACTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR GCA 90 bp CTAAAGCTGGGCTCTACCCATTCCTCTGCCTGGTTTGCCGGTGGAGGTCAAGGCTTCCTGGAGAGGGTCTaGAGTGGGGAGGGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: LKLGSTHSSAWFAGGGQGFLERV*SGEGKS
Trigger: GCTCTTCCCCTCCCCACTGCAGACCCTCTCCAGGAA...GCCTTGACCTCCACCGGCAAACCAGGCAGAGGAATGGGTAGAGCCCAGCTTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR GCA 90 bp CATGGCTTCCCCGCCACCCCCGGCACACAGAGAAGCTGCTTCCATGCCTCTGGACGTCACCACCTTCAATaGCACCTTGGTTGCATGCTC +
Preference number: 4 (lower is better)
Translates to: HGFPATPGTQRSCFHASGRHHLQ*HLGCML
Trigger: GAGCATGCAACCAAGGTGGCATTGAAGGTGGTGACG...TCCAGAGGCATGGAAGCAGCTTCTCTGTGTGCCGGGGGTGGCGGGGAAGCCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp TGTGCGTGGAGGTGTGGGCAGAGGACCACGATGAAGGCCACAGTCCCTCCAAAGGGCAAAGTCGGCCAGTaGCTTGATGTGGGTCTTGCC +
Preference number: 4 (lower is better)
Translates to: CAWRCGQRTTMKATVPPKGKVGQ*LDVGLA
Trigger: GGCAAGACCCACATCAAGGCACTGGCCGACTTTGCC...CTTTGGAGGGACTGTGGCCTTCATCGTGGTCCTCTGCCCACACCTCCACGCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp CACCAGCAAAGGCAGAAGCTGCTCTGGAGTCCAAGTGGAAAATCTCAGCAGCGCGGTCGGGTACACCGGTaGTGTCCATGCGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: HQQRQKLLWSPSGKSQQRGRVHR*CPCGWP
Trigger: TGGCCAGCCGCATGGACAGCACCGGTGTACCCGACC...GCGCTGCTGAGATTTTCCACTTGGACTCCAGAGCAGCTTCTGCCTTTGCTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp ACGATGAAGGCCACAGTCCCTCCAAAGCCAGCACTCCTGTGCCAAAGCCCCTGCGGCACACAGAGAAGCTaGTTCCATGCCTCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: TMKATVPPKPALLCQSPCGTQRS*FHASGG
Trigger: GCCTCCAGAGGCATGGAAGCAGCTTCTCTGTGTGCC...GCAGGGGCTTTGGCACAGGAGTGCTGGCTTTGGAGGGACTGTGGCCTTCATCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp CACCAGCAAAGGCAGAAGCTGCTCTGGAGTCCAAGTGGAAAATCTCAGCAGCGCCTGTGCCAAAGCCCCTaGAGGTGCAGGGTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: HQQRQKLLWSPSGKSQQRLCQSP*RCRVVA
Trigger: GGCCACCACCCTGCACCTGCAGGGGCTTTGGCACAG...GCGCTGCTGAGATTTTCCACTTGGACTCCAGAGCAGCTTCTGCCTTTGCTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp GCCACAGTCCCTCCAAAGCCAGCACTCCTGTGCCAAAGCCCCTGCAGGTGCAGGAGAATCACCACTCCTTaGTTGGCGTCCTCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: ATVPPKPALLCQSPCRCRRITTP*LASSCL
Trigger: GAGGCAAGAGGACGCCAAGCAAGGAGTGGTGATTCT...CCTGCACCTGCAGGGGCTTTGGCACAGGAGTGCTGGCTTTGGAGGGACTGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp CACCACTGGCGGGCGATGTGGAGGGGCAGGGAACTTGAGAACAACAGCTGGAAGGGAATCTGTGGGCGCTaGCTCTGTAAGCCGCAAACG +
Preference number: 4 (lower is better)
Translates to: HHWRAMWRGRELENNSWKGICGR*LCKPQT
Trigger: CGTTTGCGGCTTACAGAGGCAGCGCCCACAGATTCC...CTTCCAGCTGTTGTTCTCAAGTTCCCTGCCCCTCCACATCGCCCGCCAGTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp TGCTTGGCGTCCTCTTGCCTCCCCCTCGTAATTAGTTCTGTTTCCCTCCTAGGGGAGTGGAGCCGCGCCTaGATGCACTCTCGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: CLASSCLPLVISSVSLLGEWSRA*MHSRVS
Trigger: GGAGACCCGAGAGTGCATCCAGGCGCGGCTCCACTC...CCCTAGGAGGGAAACAGAACTAATTACGAGGGGGAGGCAAGAGGACGCCAAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp CAGAGGACCACGATGAAGGCCACAGTCCCTCCAAAGCCAGCACTCCTGTGCCAACCGCCAGCCTCCATGTaGTTGGCTAGCGTGACATCG +
Preference number: 4 (lower is better)
Translates to: QRTTMKATVPPKPALLCQPPASM*LASVTS
Trigger: CGATGTCACGCTAGCCAACCACATGGAGGCTGGCGG...TTGGCACAGGAGTGCTGGCTTTGGAGGGACTGTGGCCTTCATCGTGGTCCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp TGTCTGTGTGCGTGGAGGTGTGGGCAGAGGACCACGATGAAGGCCACAGTCCCTATGTCTGTGGTGACCTaGATGCGGTCGGGTACACCG +
Preference number: 4 (lower is better)
Translates to: CLCAWRCGQRTTMKATVPMSVVT*MRSGTP
Trigger: CGGTGTACCCGACCGCATCCAGGTCACCACAGACAT...AGGGACTGTGGCCTTCATCGTGGTCCTCTGCCCACACCTCCACGCACACAGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp GTGTGGGCAGAGGACCACGATGAAGGCCACAGTCCCTCCAAAGCCAGCACTCCTCCAGCTGGTACGTGTTaGCAGCCAGCACCTGGTACA +
Preference number: 4 (lower is better)
Translates to: VWAEDHDEGHSPSKASTPPAGTC*QPAPGT
Trigger: TGTACCAGGTGCTGGCTGCCAACACGTACCAGCTGG...AGGAGTGCTGGCTTTGGAGGGACTGTGGCCTTCATCGTGGTCCTCTGCCCACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp AGCACGGGACAGACTCAGGCTTGGCAGTTTTGGGTCCACACACTTTGCTTCTCACGAGACGGGACGGAGTaGTGTCCTTGCGGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: STGQTQAWQFWVHTLCFSRDGTE*CPCGRC
Trigger: GCACCGCCCGCAAGGACACCACTCCGTCCCGTCTCG...TGAGAAGCAAAGTGTGTGGACCCAAAACTGCCAAGCCTGAGTCTGTCCCGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp CTGGAATCTGTGGGCGCTGCCTCTGTAAGCCGCAAACGTCTGAAATCTCAGGGTACTGGTCCTGGGCGTTaGTGCGCAGGGCGATGGCCA +
Preference number: 4 (lower is better)
Translates to: LESVGAASVSRKRLKSQGTGPGR*CAGRWP
Trigger: TGGCCATCGCCCTGCGCACCAACGCCCAGGACCAGT...ACCCTGAGATTTCAGACGTTTGCGGCTTACAGAGGCAGCGCCCACAGATTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp ACGATGAAGGCCACAGTCCCTCCAAAGCCAGCACTCCTGTGCCAAAGCCCCTGCGTGTGCGTGGAGGTGTaGGCAGAGGACCACGATGAA +
Preference number: 4 (lower is better)
Translates to: TMKATVPPKPALLCQSPCVCVEV*AEDHDE
Trigger: TTCATCGTGGTCCTCTGCCCACACCTCCACGCACAC...GCAGGGGCTTTGGCACAGGAGTGCTGGCTTTGGAGGGACTGTGGCCTTCATCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp CACGATGAAGGCCACAGTCCCTCCAAAGCCAGCACTCCTGTGCCAAAGCCCCTGAGTGCGGAACCTAGATaGGGCCATGTCTTCCGTGGG +
Preference number: 4 (lower is better)
Translates to: HDEGHSPSKASTPVPKPLSAEPR*GHVFRG
Trigger: CCCACGGAAGACATGGCCCCATCTAGGTTCCGCACT...CAGGGGCTTTGGCACAGGAGTGCTGGCTTTGGAGGGACTGTGGCCTTCATCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491190.5
CDS-3UTR TCA 90 bp TGTCTGTGTGCGTGGAGGTGTGGGCAGAGGACCACGATGAAGGCCACAGTCCCTCTAAGTCAGGCTCCCTaGAGGTCAGGAGGAACTTGC +
Preference number: 4 (lower is better)
Translates to: CLCAWRCGQRTTMKATVPLSQAP*RSGGTC
Trigger: GCAAGTTCCTCCTGACCTTCAGGGAGCCTGACTTAG...AGGGACTGTGGCCTTCATCGTGGTCCTCTGCCCACACCTCCACGCACACAGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR TCA 90 bp CAAAGGCAGAAGCTGCTCTGGAGTCCAAGTGGAAAATCTCAGCAGCGCAGCCCTCTATGGCGTTGGCGGTaGCCAGCAGGTCGGCGTTGT +
Preference number: 4 (lower is better)
Translates to: QRQKLLWSPSGKSQQRSPLWRWR*PAGRRC
Trigger: ACAACGCCGACCTGCTGGTCACCGCCAACGCCATAG...AGGGCTGCGCTGCTGAGATTTTCCACTTGGACTCCAGAGCAGCTTCTGCCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR TCA 90 bp GTGTGGGCAGAGGACCACGATGAAGGCCACAGTCCCTCCAAAGCCAGCACTCCTGGGAGGTCCCGTTGTTaGAGAAGTCTATGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: VWAEDHDEGHSPSKASTPGRSRC*RSLWRW
Trigger: CCAACGCCATAGACTTCTTCAACAACGGGACCTCCC...AGGAGTGCTGGCTTTGGAGGGACTGTGGCCTTCATCGTGGTCCTCTGCCCACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR TCA 90 bp GACTCTAAAGCTGGGCTCTACCCATTCCTCTGCCTGGTTTGCCGGTGGAGGTCAAGTCGGCCAGTGCCTTaGTGTGGGTCTTGCCCACCT +
Preference number: 4 (lower is better)
Translates to: DSKAGLYPFLCLVCRWRSSRPVP*CGSCPP
Trigger: AGGTGGGCAAGACCCACATCAAGGCACTGGCCGACT...TGACCTCCACCGGCAAACCAGGCAGAGGAATGGGTAGAGCCCAGCTTTAGAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR TCA 90 bp TGGTACAGGTGGACATCAAAGTCACATTGTGGCAGCTGGCACAGAGCCACTGCCGGCACAGCCCCGAGGTaGGAAGTAGCTGAGGATCCG +
Preference number: 4 (lower is better)
Translates to: WYRWTSKSHCGSWHRATAGTAPR*EVAEDP
Trigger: CGGATCCTCAGCTACTTCTCACCTCGGGGCTGTGCC...GGCAGTGGCTCTGTGCCAGCTGCCACAATGTGACTTTGATGTCCACCTGTACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR TCA 90 bp GTACATACGTGTGCGTGTGTCAGAAAAGATGGGGCAGTGTGTCCATGCATCCTCCCAGCACCACGGCGATaGGCGCATAGCAGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: VHTCACVRKDGAVCPCILPAPRR*AHSRPG
Trigger: GCCTGGCCTGCTATGCGCTCATCGCCGTGGTGCTGG...GAGGATGCATGGACACACTGCCCCATCTTTTCTGACACACGCACACGTATGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR TCA 90 bp CACGATGAAGGCCACAGTCCCTCCAAAGCCAGCACTCCTGTGCCAAAGCCCCTGATCCCCCAGTCTGAGTaGACATCTCCAGGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: HDEGHSPSKASTPVPKPLIPQSE*TSPGRA
Trigger: GGCTCTTCCTGGAGATGTTCACTCAGACTGGGGGAT...CAGGGGCTTTGGCACAGGAGTGCTGGCTTTGGAGGGACTGTGGCCTTCATCGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR GCA 90 bp GTGGACTCTAAAGCTGGGCTCTACCCATTCCTCTGCCTGGTTTGCCGGTGGAGGCAGCCGGATAGTGGGTaGAGACACCCACGATGTTGG +
Preference number: 4 (lower is better)
Translates to: VDSKAGLYPFLCLVCRWRQPDSG*RHPRCW
Trigger: CCAACATCGTGGGTGTCTGCACCCACTATCCGGCTG...CCTCCACCGGCAAACCAGGCAGAGGAATGGGTAGAGCCCAGCTTTAGAGTCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR GCA 90 bp CACCACTGGCGGGCGATGTGGAGGGGCAGGGAACTTGAGAACAACAGCTGGAAGAGGTCAGGAGGAACTTaGGGACGTGCTCAGACCGAA +
Preference number: 4 (lower is better)
Translates to: HHWRAMWRGRELENNSWKRSGGT*GRAQTE
Trigger: TTCGGTCTGAGCACGTCCGCAAGTTCCTCCTGACCT...CTTCCAGCTGTTGTTCTCAAGTTCCCTGCCCCTCCACATCGCCCGCCAGTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR GCA 90 bp CACGATGAAGGCCACAGTCCCTCCAAAGCCAGCACTCCTGTGCCAAAGCCCCTGCAATGCCACCTTGGTTaGATGCTCAGGGCACTGGGA +
Preference number: 4 (lower is better)
Translates to: HDEGHSPSKASTPVPKPLQCHLG*MLRALG
Trigger: TCCCAGTGCCCTGAGCATGCAACCAAGGTGGCATTG...CAGGGGCTTTGGCACAGGAGTGCTGGCTTTGGAGGGACTGTGGCCTTCATCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR GCA 90 bp TGTCTGTGTGCGTGGAGGTGTGGGCAGAGGACCACGATGAAGGCCACAGTCCCTTTGATCTTCTCCAGCTaGCGGAACCGATCCTCGCTG +
Preference number: 4 (lower is better)
Translates to: CLCAWRCGQRTTMKATVPLIFSS*RNRSSL
Trigger: CAGCGAGGATCGGTTCCGGCAGCTGGAGAAGATCAA...AGGGACTGTGGCCTTCATCGTGGTCCTCTGCCCACACCTCCACGCACACAGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp GTCTTCTACAGAGGGAAACATCTTTGGTCAGCTGGGTGCTCGCAGGACGCTGGCGTACTGAGGCTTTCGTaGCCCTATCACCCCGGCCAC +
Preference number: 4 (lower is better)
Translates to: VFYRGKHLWSAGCSQDAGVLRLS*PYHPGH
Trigger: GTGGCCGGGGTGATAGGGGCACGAAAGCCTCAGTAC...GCCAGCGTCCTGCGAGCACCCAGCTGACCAAAGATGTTTCCCTCTGTAGAAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp TGGTACAGGTGGACATCAAAGTCACATTGTGGCAGCTGGCACAGAGCCACTGCCCCGGCGAAGAGACACTaGGGGTGCGCTTTCCTCGCA +
Preference number: 4 (lower is better)
Translates to: WYRWTSKSHCGSWHRATAPAKRH*GCAFLA
Trigger: TGCGAGGAAAGCGCACCCGCAGTGTCTCTTCGCCGG...GGCAGTGGCTCTGTGCCAGCTGCCACAATGTGACTTTGATGTCCACCTGTACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR GCA 90 bp GGAAGCCATGACCATGGGAGAACATGGGATGAACTCAGCACACACACTTTACTCTGTCCTTGCGGGCGGTaGCTCCTCGGGCCGGCAGTG +
Preference number: 4 (lower is better)
Translates to: GSHDHGRTWDELSTHTLLCPCGR*LLGPAV
Trigger: CACTGCCGGCCCGAGGAGGCACCGCCCGCAAGGACA...GAGTAAAGTGTGTGTGCTGAGTTCATCCCATGTTCTCCCATGGTCATGGCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR GCA 90 bp ACACACACATTCCCACGGCTCCTTTCCACCTGTGCAGCAGCACCTGTTAGAAAATGCCCTCAGAGGCGCTaGGTGGCTGCGGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: THTFPRLLSTCAAAPVRKCPQRR*VAAAAA
Trigger: TGCTGCTGCCGCAGCCACGCAGCGCCTCTGAGGGCA...TTTTCTAACAGGTGCTGCTGCACAGGTGGAAAGGAGCCGTGGGAATGTGTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR GCA 90 bp CTGGAATCTGTGGGCGCTGCCTCTGTAAGCCGCAAACGTCTGAAATCTCAGGGTCTTTGGTCAGCTGGGTaGTCGCAGGACGCTGGCACC +
Preference number: 4 (lower is better)
Translates to: LESVGAASVSRKRLKSQGLWSAG*SQDAGT
Trigger: GGTGCCAGCGTCCTGCGAGCACCCAGCTGACCAAAG...ACCCTGAGATTTCAGACGTTTGCGGCTTACAGAGGCAGCGCCCACAGATTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR GCA 90 bp CAGCAAAGGCAGAAGCTGCTCTGGAGTCCAAGTGGAAAATCTCAGCAGCGCAGCCTTTGGTCAGCTGGGTaGTCGCAGGACGCTGGCACC +
Preference number: 4 (lower is better)
Translates to: QQRQKLLWSPSGKSQQRSLWSAG*SQDAGT
Trigger: GGTGCCAGCGTCCTGCGAGCACCCAGCTGACCAAAG...GCTGCGCTGCTGAGATTTTCCACTTGGACTCCAGAGCAGCTTCTGCCTTTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp TTGGTGTGCGGGGAGGGGAGGGTGGTGCTAGAGCCCAGTGAGAGGTGGTACAGGAAAGCACACACCCACTaGTCTGGTGGTACCTTGGAA +
Preference number: 4 (lower is better)
Translates to: LVCGEGRVVLEPSERWYRKAHTH*SGGTLE
Trigger: TTCCAAGGTACCACCAGAGCAGTGGGTGTGTGCTTT...CCTGTACCACCTCTCACTGGGCTCTAGCACCACCCTCCCCTCCCCGCACACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp CTGCAAAGCACCTGGCCTTCTGTAAGCACTCTGGAATCTGTGGGCGCTGCCTCTCCGCCAGCCTCCATGTaGTTGGCTAGCGTGACATCG +
Preference number: 4 (lower is better)
Translates to: LQSTWPSVSTLESVGAASPPASM*LASVTS
Trigger: CGATGTCACGCTAGCCAACCACATGGAGGCTGGCGG...AGAGGCAGCGCCCACAGATTCCAGAGTGCTTACAGAAGGCCAGGTGCTTTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp CAGAGGACCACGATGAAGGCCACAGTCCCTCCAAAGCCAGCACTCCTGTGCCAAGTAGCCTTGGTGATGTaGATGCGTCCTGCCTTGCCG +
Preference number: 4 (lower is better)
Translates to: QRTTMKATVPPKPALLCQVALVM*MRPALP
Trigger: CGGCAAGGCAGGACGCATCCACATCACCAAGGCTAC...TTGGCACAGGAGTGCTGGCTTTGGAGGGACTGTGGCCTTCATCGTGGTCCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp ACGATGAAGGCCACAGTCCCTCCAAAGCCAGCACTCCTGTGCCAAAGCCCCTGCTCTTCTTTCCGCTTCTaGGTGCAGCGCAGGATGAGG +
Preference number: 4 (lower is better)
Translates to: TMKATVPPKPALLCQSPCSSFRF*VQRRMR
Trigger: CCTCATCCTGCGCTGCACCCAGAAGCGGAAAGAAGA...GCAGGGGCTTTGGCACAGGAGTGCTGGCTTTGGAGGGACTGTGGCCTTCATCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp TGTGCGTGGAGGTGTGGGCAGAGGACCACGATGAAGGCCACAGTCCCTCCAAAGTCTTCTTTCCGCTTCTaGGTGCAGCGCAGGATGAGG +
Preference number: 4 (lower is better)
Translates to: CAWRCGQRTTMKATVPPKSSFRF*VQRRMR
Trigger: CCTCATCCTGCGCTGCACCCAGAAGCGGAAAGAAGA...CTTTGGAGGGACTGTGGCCTTCATCGTGGTCCTCTGCCCACACCTCCACGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp TCCAAAGCCAGCACTCCTGTGCCAAAGCCCCTGCAGGTGCAGGGTGGTGGCCTGTCTGGCGGTTCATCTTaGCGATCATGGCCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: SKASTPVPKPLQVQGGGLSGGSS*RSWPSL
Trigger: AAGAGAAGGCCATGATCGCCAAGATGAACCGCCAGA...CAGGCCACCACCCTGCACCTGCAGGGGCTTTGGCACAGGAGTGCTGGCTTTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp GTGTGGGCAGAGGACCACGATGAAGGCCACAGTCCCTCCAAAGCCAGCACTCCTTCCGCTTCATCTCCTTaGACACCTGGTTGCCACCCA +
Preference number: 4 (lower is better)
Translates to: VWAEDHDEGHSPSKASTPSASSP*TPGCHP
Trigger: TGGGTGGCAACCAGGTGTCCAAGGAGATGAAGCGGA...AGGAGTGCTGGCTTTGGAGGGACTGTGGCCTTCATCGTGGTCCTCTGCCCACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp CCGCAAACGTCTGAAATCTCAGGGTGTGGAGGGCACCACACTGCCTGTCGCAGGGGGCGTTCTTGTCCTTaGGGTCTTCAAAGCCCATCC +
Preference number: 4 (lower is better)
Translates to: PQTSEISGCGGHHTACRRGRSCP*GLQSPS
Trigger: GGATGGGCTTTGAAGACCCCAAGGACAAGAACGCCC...CCTGCGACAGGCAGTGTGGTGCCCTCCACACCCTGAGATTTCAGACGTTTGCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp TTGGTGTGCGGGGAGGGGAGGGTGGTGCTAGAGCCCAGTGAGAGGTGGTACAGGGGCACGATGGTGATCTaGACAAAGCAGATGAAGAGG +
Preference number: 4 (lower is better)
Translates to: LVCGEGRVVLEPSERWYRGTMVI*TKQMKR
Trigger: CCTCTTCATCTGCTTTGTCCAGATCACCATCGTGCC...CCTGTACCACCTCTCACTGGGCTCTAGCACCACCCTCCCCTCCCCGCACACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp CTGCTCTGGAGTCCAAGTGGAAAATCTCAGCAGCGCAGCCCTGCGGGCTGGAGCCCTTCAATGCCACCTTaGTTGCATGCTCAGGGCACT +
Preference number: 4 (lower is better)
Translates to: LLWSPSGKSQQRSPAGWSPSMPP*LHAQGT
Trigger: AGTGCCCTGAGCATGCAACCAAGGTGGCATTGAAGG...GCTCCAGCCCGCAGGGCTGCGCTGCTGAGATTTTCCACTTGGACTCCAGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp CACACACATTCCCACGGCTCCTTTCCACCTGTGCAGCAGCACCTGTTAGAAAACCCCCGGCACTCCAGCTaGTACGTGTTGGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: HTHSHGSFPPVQQHLLENPRHSS*YVLAAS
Trigger: GCTGGCTGCCAACACGTACCAGCTGGAGTGCCGGGG...GTTTTCTAACAGGTGCTGCTGCACAGGTGGAAAGGAGCCGTGGGAATGTGTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp GGAGGGTGTGTGCATGTGTGTACATACGTGTGCGTGTGTCAGAAAAGATGGGGCAGGCCCATGTGGTCCTaGTGGAAGGCGGCGCGGTTG +
Preference number: 4 (lower is better)
Translates to: GGCVHVCTYVCVCQKRWGRPMWS*WKAARL
Trigger: CAACCGCGCCGCCTTCCACCAGGACCACATGGGCCT...GCCCCATCTTTTCTGACACACGCACACGTATGTACACACATGCACACACCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp GTGGACTCTAAAGCTGGGCTCTACCCATTCCTCTGCCTGGTTTGCCGGTGGAGGACATCTTTGGTCAGCTaGGTGCTCGCAGGACGCTGG +
Preference number: 4 (lower is better)
Translates to: VDSKAGLYPFLCLVCRWRTSLVS*VLAGRW
Trigger: CCAGCGTCCTGCGAGCACCCAGCTGACCAAAGATGT...CCTCCACCGGCAAACCAGGCAGAGGAATGGGTAGAGCCCAGCTTTAGAGTCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp GCCACAGTCCCTCCAAAGCCAGCACTCCTGTGCCAAAGCCCCTGCAGGTGCAGGCAGCTCGGCCTGGGATaGGAAAGCAGCTTTTTGTTT +
Preference number: 4 (lower is better)
Translates to: ATVPPKPALLCQSPCRCRQLGLG*ESSFLF
Trigger: AAACAAAAAGCTGCTTTCCCATCCCAGGCCGAGCTG...CCTGCACCTGCAGGGGCTTTGGCACAGGAGTGCTGGCTTTGGAGGGACTGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp TGTGCGTGGAGGTGTGGGCAGAGGACCACGATGAAGGCCACAGTCCCTCCAAAGGGTTCCAGCTCGGCCTaGGATGGGAAAGCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: CAWRCGQRTTMKATVPPKGSSSA*DGKAAF
Trigger: AAAAGCTGCTTTCCCATCCCAGGCCGAGCTGGAACC...CTTTGGAGGGACTGTGGCCTTCATCGTGGTCCTCTGCCCACACCTCCACGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp CACGATGAAGGCCACAGTCCCTCCAAAGCCAGCACTCCTGTGCCAAAGCCCCTGTCACATTGTGGCAGCTaGCACAGAGCCACTGCCTCA +
Preference number: 4 (lower is better)
Translates to: HDEGHSPSKASTPVPKPLSHCGS*HRATAS
Trigger: TGAGGCAGTGGCTCTGTGCCAGCTGCCACAATGTGA...CAGGGGCTTTGGCACAGGAGTGCTGGCTTTGGAGGGACTGTGGCCTTCATCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR TCA 90 bp CTGGAGCATGGCTTCCCCGCCACCCCCGGCACACAGAGAAGCTGCTTCCATGCCTGGTGCAGGAGAAAATaGGAACATTGGAGACAAGCT +
Preference number: 4 (lower is better)
Translates to: LEHGFPATPGTQRSCFHAWCRRK*EHWRQA
Trigger: AGCTTGTCTCCAATGTTCTCATTTTCTCCTGCACCA...GGCATGGAAGCAGCTTCTCTGTGTGCCGGGGGTGGCGGGGAAGCCATGCTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR TCA 90 bp CACCAGCAAAGGCAGAAGCTGCTCTGGAGTCCAAGTGGAAAATCTCAGCAGCGCGGCAGAGGACCACGATaGAGGCCACAGTCCCTCCAA +
Preference number: 4 (lower is better)
Translates to: HQQRQKLLWSPSGKSQQRGRGPR*RPQSLQ
Trigger: TTGGAGGGACTGTGGCCTTCATCGTGGTCCTCTGCC...GCGCTGCTGAGATTTTCCACTTGGACTCCAGAGCAGCTTCTGCCTTTGCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR TCA 90 bp TGCTTGGCGTCCTCTTGCCTCCCCCTCGTAATTAGTTCTGTTTCCCTCCTAGGGTGCACCTTGGCCAACTaGGTAGGCCAGGGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: CLASSCLPLVISSVSLLGCTLAN*VGQGGL
Trigger: CAAGCCTCCCTGGCCTACTCAGTTGGCCAAGGTGCA...CCCTAGGAGGGAAACAGAACTAATTACGAGGGGGAGGCAAGAGGACGCCAAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR TCA 90 bp CTAAAGCTGGGCTCTACCCATTCCTCTGCCTGGTTTGCCGGTGGAGGTCAAGGCCCCTTTCCGCAAACCTaGAGGCTGCACATTGCATCC +
Preference number: 4 (lower is better)
Translates to: LKLGSTHSSAWFAGGGQGPFPQT*RLHIAS
Trigger: GGATGCAATGTGCAGCCTTCAGGTTTGCGGAAAGGG...GCCTTGACCTCCACCGGCAAACCAGGCAGAGGAATGGGTAGAGCCCAGCTTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR TCA 90 bp CACCAGCAAAGGCAGAAGCTGCTCTGGAGTCCAAGTGGAAAATCTCAGCAGCGCGGTGCTAGAGCCCAGTaGGAGGTGGTACAGGTGGAC +
Preference number: 4 (lower is better)
Translates to: HQQRQKLLWSPSGKSQQRGARAQ*EVVQVD
Trigger: GTCCACCTGTACCACCTCTCACTGGGCTCTAGCACC...GCGCTGCTGAGATTTTCCACTTGGACTCCAGAGCAGCTTCTGCCTTTGCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR GCA 90 bp CAGAGGACCACGATGAAGGCCACAGTCCCTCCAAAGCCAGCACTCCTGTGCCAACAGTGTGGTGGGTTGTaGCCGATGGAGTTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: QRTTMKATVPPKPALLCQQCGGL*PMELVL
Trigger: GAGAACCAACTCCATCGGGCACAACCCACCACACTG...TTGGCACAGGAGTGCTGGCTTTGGAGGGACTGTGGCCTTCATCGTGGTCCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp GAAGCTGCTCTGGAGTCCAAGTGGAAAATCTCAGCAGCGCAGCCCTGCGGGCTGACCGAAGCCTATCAATaGTCCTGGCGTCAATGGCAC +
Preference number: 4 (lower is better)
Translates to: EAALESKWKISAAQPCGLTEAYQ*SWRQWH
Trigger: GTGCCATTGACGCCAGGAGCATTGATAGGCTTCGGT...CAGCCCGCAGGGCTGCGCTGCTGAGATTTTCCACTTGGACTCCAGAGCAGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp CTGGAATCTGTGGGCGCTGCCTCTGTAAGCCGCAAACGTCTGAAATCTCAGGGTCTCGCGCTGATGTTGTaGTCCTGTGCCAAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: LESVGAASVSRKRLKSQGLALML*SCAKQP
Trigger: GGGCTGCTTGGCACAGGAGCACAACATCAGCGCGAG...ACCCTGAGATTTCAGACGTTTGCGGCTTACAGAGGCAGCGCCCACAGATTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR GCA 90 bp TTGGCGTCCTCTTGCCTCCCCCTCGTAATTAGTTCTGTTTCCCTCCTAGGGCACCTCGCGCTGATGTTGTaGTCCTGTGCCAAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: LASSCLPLVISSVSLLGHLALML*SCAKQP
Trigger: GGGCTGCTTGGCACAGGAGCACAACATCAGCGCGAG...GTGCCCTAGGAGGGAAACAGAACTAATTACGAGGGGGAGGCAAGAGGACGCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp CAAAGGCAGAAGCTGCTCTGGAGTCCAAGTGGAAAATCTCAGCAGCGCAGCCCTAGTACTCGGGGAAGTTaGAGTTGGGCCAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: QRQKLLWSPSGKSQQRSPSTRGS*SWARGC
Trigger: GCAGCCCCTGGCCCAACTGCAACTTCCCCGAGTACT...AGGGCTGCGCTGCTGAGATTTTCCACTTGGACTCCAGAGCAGCTTCTGCCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp TGTCTGTGTGCGTGGAGGTGTGGGCAGAGGACCACGATGAAGGCCACAGTCCCTCGTCACCACCTTCAATaGCACCTTGGTTGCATGCTC +
Preference number: 4 (lower is better)
Translates to: CLCAWRCGQRTTMKATVPRHHLQ*HLGCML
Trigger: GAGCATGCAACCAAGGTGGCATTGAAGGTGGTGACG...AGGGACTGTGGCCTTCATCGTGGTCCTCTGCCCACACCTCCACGCACACAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp CAGCAAAGGCAGAAGCTGCTCTGGAGTCCAAGTGGAAAATCTCAGCAGCGCAGCAGTAGAGCTCATCATTaGGCCGCTCGCGGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: QQRQKLLWSPSGKSQQRSSRAHH*AARGPG
Trigger: TCCTGGCCCGCGAGCGGCGCAATGATGAGCTCTACT...GCTGCGCTGCTGAGATTTTCCACTTGGACTCCAGAGCAGCTTCTGCCTTTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp TTGGCGTCCTCTTGCCTCCCCCTCGTAATTAGTTCTGTTTCCCTCCTAGGGCACAGTAGAGCTCATCATTaGGCCGCTCGCGGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: LASSCLPLVISSVSLLGHSRAHH*AARGPG
Trigger: TCCTGGCCCGCGAGCGGCGCAATGATGAGCTCTACT...GTGCCCTAGGAGGGAAACAGAACTAATTACGAGGGGGAGGCAAGAGGACGCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp CAGCAAAGGCAGAAGCTGCTCTGGAGTCCAAGTGGAAAATCTCAGCAGCGCAGCGTACTGAGGCTTTCGTaGCCCTATCACCCCGGCCAC +
Preference number: 4 (lower is better)
Translates to: QQRQKLLWSPSGKSQQRSVLRLS*PYHPGH
Trigger: GTGGCCGGGGTGATAGGGGCACGAAAGCCTCAGTAC...GCTGCGCTGCTGAGATTTTCCACTTGGACTCCAGAGCAGCTTCTGCCTTTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp GTCTTCTACAGAGGGAAACATCTTTGGTCAGCTGGGTGCTCGCAGGACGCTGGCACATCCATCTTCCCCTaGCCTTGGAAAGCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: VFYRGKHLWSAGCSQDAGTSIFP*PWKAGS
Trigger: GGAGCCCGCTTTCCAAGGGCAGGGGAAGATGGATGT...GCCAGCGTCCTGCGAGCACCCAGCTGACCAAAGATGTTTCCCTCTGTAGAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491190.5
CDS-3UTR GCA 90 bp CAAAGCACCTGGCCTTCTGTAAGCACTCTGGAATCTGTGGGCGCTGCCTCTGTAAAGAGACACTGCGGGTaGGCTTTCCTCGCAGCGGAC +
Preference number: 4 (lower is better)
Translates to: QSTWPSVSTLESVGAASVKRHCG*AFLAAD
Trigger: GTCCGCTGCGAGGAAAGCGCACCCGCAGTGTCTCTT...TACAGAGGCAGCGCCCACAGATTCCAGAGTGCTTACAGAAGGCCAGGTGCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR GCA 90 bp CAAAGGCAGAAGCTGCTCTGGAGTCCAAGTGGAAAATCTCAGCAGCGCAGCCCTTGGGACAGAGGCCGCTaGCCACCAGCAAAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: QRQKLLWSPSGKSQQRSPWDRGR*PPAKAE
Trigger: TTCTGCCTTTGCTGGTGGGCAGCGGCCTCTGTCCCA...AGGGCTGCGCTGCTGAGATTTTCCACTTGGACTCCAGAGCAGCTTCTGCCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp TGTCTGTGTGCGTGGAGGTGTGGGCAGAGGACCACGATGAAGGCCACAGTCCCTTGCTTGGCGTCCTCTTaGCTCCCCCTCGTAATTAGT +
Preference number: 4 (lower is better)
Translates to: CLCAWRCGQRTTMKATVPCLASS*LPLVIS
Trigger: ACTAATTACGAGGGGGAGGCAAGAGGACGCCAAGCA...AGGGACTGTGGCCTTCATCGTGGTCCTCTGCCCACACCTCCACGCACACAGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp GTCTTCTACAGAGGGAAACATCTTTGGTCAGCTGGGTGCTCGCAGGACGCTGGCTTCCTCTGCCTGGTTTaGCGGTGGAGGTCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: VFYRGKHLWSAGCSQDAGFLCLV*RWRSRP
Trigger: TGGCCTTGACCTCCACCGGCAAACCAGGCAGAGGAA...GCCAGCGTCCTGCGAGCACCCAGCTGACCAAAGATGTTTCCCTCTGTAGAAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR GCA 90 bp CACGATGAAGGCCACAGTCCCTCCAAAGCCAGCACTCCTGTGCCAAAGCCCCTGGCCACCTTGGTTGCATaGTCAGGGCTTTGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: HDEGHSPSKASTPVPKPLATLVA*SGLCSL
Trigger: CAAGGAACAAAGCCCTGAGCATGCAACCAAGGTGGC...CAGGGGCTTTGGCACAGGAGTGCTGGCTTTGGAGGGACTGTGGCCTTCATCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491190.5
CDS-3UTR CCA 90 bp TGCAGGGTGGTGGCCTGTCTGAAGTTTAAAGGCTCACATAGAAAAGCAGACCCCTTCTCCCGCTGCGAGTaGAGCCGCGCCTGGATGCAC +
Preference number: 4 (lower is better)
Translates to: CRVVACLKFKGSHRKADPFSRCE*SRAWMH
Trigger: GTGCATCCAGGCGCGGCTCCACTCGCAGCGGGAGAA...GGGGTCTGCTTTTCTATGTGAGCCTTTAAACTTCAGACAGGCCACCACCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp AGCACGGGACAGACTCAGGCTTGGCAGTTTTGGGTCCACACACTTTGCTTCTCAAGCCGTTCCTGCTGCTaGTTCTCCCGCTGCGAGTGG +
Preference number: 4 (lower is better)
Translates to: STGQTQAWQFWVHTLCFSSRSCC*FSRCEW
Trigger: CCACTCGCAGCGGGAGAACCAGCAGCAGGAACGGCT...TGAGAAGCAAAGTGTGTGGACCCAAAACTGCCAAGCCTGAGTCTGTCCCGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp GAGTCTTCTACAGAGGGAAACATCTTTGGTCAGCTGGGTGCTCGCAGGACGCTGACACAGCAGTGGGCGTaGTCAGCCCTTGCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: ESSTEGNIFGQLGARRTLTQQWA*SALASG
Trigger: GCCTGAAGCAAGGGCTGACCACGCCCACTGCTGTGT...CAGCGTCCTGCGAGCACCCAGCTGACCAAAGATGTTTCCCTCTGTAGAAGACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp CTTCTACAGAGGGAAACATCTTTGGTCAGCTGGGTGCTCGCAGGACGCTGGCACGTGGGTTGTGCCCGATaGAGTTGGTTCTCTGGCGGT +
Preference number: 4 (lower is better)
Translates to: LLQRETSLVSWVLAGRWHVGCAR*SWFSGG
Trigger: ACCGCCAGAGAACCAACTCCATCGGGCACAACCCAC...GTGCCAGCGTCCTGCGAGCACCCAGCTGACCAAAGATGTTTCCCTCTGTAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp CAAAGGCAGAAGCTGCTCTGGAGTCCAAGTGGAAAATCTCAGCAGCGCAGCCCTGGGTTCGCACTCTCCTaGGCGTTCTTGTCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: QRQKLLWSPSGKSQQRSPGFALS*AFLSLG
Trigger: CCCCAAGGACAAGAACGCCCAGGAGAGTGCGAACCC...AGGGCTGCGCTGCTGAGATTTTCCACTTGGACTCCAGAGCAGCTTCTGCCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp GTCTTCTACAGAGGGAAACATCTTTGGTCAGCTGGGTGCTCGCAGGACGCTGGCGCCTATCAATGCTCCTaGCGTCAATGGCACGGCCCA +
Preference number: 4 (lower is better)
Translates to: VFYRGKHLWSAGCSQDAGAYQCS*RQWHGP
Trigger: TGGGCCGTGCCATTGACGCCAGGAGCATTGATAGGC...GCCAGCGTCCTGCGAGCACCCAGCTGACCAAAGATGTTTCCCTCTGTAGAAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp CTAAAGCTGGGCTCTACCCATTCCTCTGCCTGGTTTGCCGGTGGAGGTCAAGGCGGTCCATCAGCTTCATaGCAAAGTCGGCCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: LKLGSTHSSAWFAGGGQGGPSAS*QSRPVP
Trigger: AGGCACTGGCCGACTTTGCCATGAAGCTGATGGACC...GCCTTGACCTCCACCGGCAAACCAGGCAGAGGAATGGGTAGAGCCCAGCTTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp GTACATACGTGTGCGTGTGTCAGAAAAGATGGGGCAGTGTGTCCATGCATCCTCAGACGTCCGGGATCCTaGCTCGCGTCGAGCTCGACG +
Preference number: 4 (lower is better)
Translates to: VHTCACVRKDGAVCPCILRRPGS*LASSST
Trigger: CGTCGAGCTCGACGCGAGCCAGGATCCCGGACGTCT...GAGGATGCATGGACACACTGCCCCATCTTTTCTGACACACGCACACGTATGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp CAAAGCACCTGGCCTTCTGTAAGCACTCTGGAATCTGTGGGCGCTGCCTCTGTAGTCCCAGGTCCGAAATaGAGTTGCCTCCGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: QSTWPSVSTLESVGAASVVPGPK*SCLRGG
Trigger: CCCACCTCGGAGGCAACTCCATTTCGGACCTGGGAC...TACAGAGGCAGCGCCCACAGATTCCAGAGTGCTTACAGAAGGCCAGGTGCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp ATCCTCCTACTTAATCTGAGCATATGGTACCCCAAAAGCACACACCCACTGCTCCTCAGAGGCGCTGCGTaGCTGCGGCAGCAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: ILLLNLSIWYPKSTHPLLLRGAA*LRQQQA
Trigger: GGCCTGCTGCTGCCGCAGCCACGCAGCGCCTCTGAG...GAGCAGTGGGTGTGTGCTTTTGGGGTACCATATGCTCAGATTAAGTAGGAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp CCGCAAACGTCTGAAATCTCAGGGTGTGGAGGGCACCACACTGCCTGTCGCAGGAGAGGGAAACATCTTTaGTCAGCTGGGTGCTCGCAG +
Preference number: 4 (lower is better)
Translates to: PQTSEISGCGGHHTACRRRGKHL*SAGCSQ
Trigger: CTGCGAGCACCCAGCTGACCAAAGATGTTTCCCTCT...CCTGCGACAGGCAGTGTGGTGCCCTCCACACCCTGAGATTTCAGACGTTTGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp TTGGCGTCCTCTTGCCTCCCCCTCGTAATTAGTTCTGTTTCCCTCCTAGGGCACCACTGTCTGTGTGCGTaGAGGTGTGGGCAGAGGACC +
Preference number: 4 (lower is better)
Translates to: LASSCLPLVISSVSLLGHHCLCA*RCGQRT
Trigger: GGTCCTCTGCCCACACCTCCACGCACACAGACAGTG...GTGCCCTAGGAGGGAAACAGAACTAATTACGAGGGGGAGGCAAGAGGACGCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp GGAAGCCATGACCATGGGAGAACATGGGATGAACTCAGCACACACACTTTACTCGGAGAGGGGTCCCCATaGGGCCGGGAAGCCATGACC +
Preference number: 4 (lower is better)
Translates to: GSHDHGRTWDELSTHTLLGEGSP*GREAMT
Trigger: GGTCATGGCTTCCCGGCCCCATGGGGACCCCTCTCC...GAGTAAAGTGTGTGTGCTGAGTTCATCCCATGTTCTCCCATGGTCATGGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR TCA 90 bp CAAAGCACCTGGCCTTCTGTAAGCACTCTGGAATCTGTGGGCGCTGCCTCTGTAGGGTGCAGCGCAGGATaGGGAAGGTCTCGATACTGT +
Preference number: 4 (lower is better)
Translates to: QSTWPSVSTLESVGAASVGCSAG*GRSRYC
Trigger: ACAGTATCGAGACCTTCCTCATCCTGCGCTGCACCC...TACAGAGGCAGCGCCCACAGATTCCAGAGTGCTTACAGAAGGCCAGGTGCTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR TCA 90 bp TGCTTGGCGTCCTCTTGCCTCCCCCTCGTAATTAGTTCTGTTTCCCTCCTAGGGGGGTGCAGCGCAGGATaGGGAAGGTCTCGATACTGT +
Preference number: 4 (lower is better)
Translates to: CLASSCLPLVISSVSLLGGCSAG*GRSRYC
Trigger: ACAGTATCGAGACCTTCCTCATCCTGCGCTGCACCC...CCCTAGGAGGGAAACAGAACTAATTACGAGGGGGAGGCAAGAGGACGCCAAGCA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR TCA 90 bp GTCTTCTACAGAGGGAAACATCTTTGGTCAGCTGGGTGCTCGCAGGACGCTGGCCTAAGTCAGGCTCCCTaGAGGTCAGGAGGAACTTGC +
Preference number: 4 (lower is better)
Translates to: VFYRGKHLWSAGCSQDAGLSQAP*RSGGTC
Trigger: GCAAGTTCCTCCTGACCTTCAGGGAGCCTGACTTAG...GCCAGCGTCCTGCGAGCACCCAGCTGACCAAAGATGTTTCCCTCTGTAGAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR TCA 90 bp TCCAAAGCCAGCACTCCTGTGCCAAAGCCCCTGCAGGTGCAGGGTGGTGGCCTGTGGTGCAGGAGAAAATaGGAACATTGGAGACAAGCT +
Preference number: 4 (lower is better)
Translates to: SKASTPVPKPLQVQGGGLWCRRK*EHWRQA
Trigger: AGCTTGTCTCCAATGTTCTCATTTTCTCCTGCACCA...CAGGCCACCACCCTGCACCTGCAGGGGCTTTGGCACAGGAGTGCTGGCTTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR TCA 90 bp CTGGAGCATGGCTTCCCCGCCACCCCCGGCACACAGAGAAGCTGCTTCCATGCCTGGCATATCTATCTGTaGGATCTCCAAGGCTTTCAA +
Preference number: 4 (lower is better)
Translates to: LEHGFPATPGTQRSCFHAWHIYL*DLQGFQ
Trigger: TTGAAAGCCTTGGAGATCTCACAGATAGATATGCCA...GGCATGGAAGCAGCTTCTCTGTGTGCCGGGGGTGGCGGGGAAGCCATGCTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR TCA 90 bp GTGTGGAGGGCACCACACTGCCTGTCGCAGGATGAGATTGCTTCCCTTGGTTCCTACACACAGTACAAATaGGCACACCCGCCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: VWRAPHCLSQDEIASLGSYTQYK*AHPPCC
Trigger: ACAGCAGGGCGGGTGTGCTCATTTGTACTGTGTGTA...GGAACCAAGGGAAGCAATCTCATCCTGCGACAGGCAGTGTGGTGCCCTCCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR TCA 90 bp CAGAGGACCACGATGAAGGCCACAGTCCCTCCAAAGCCAGCACTCCTGTGCCAAGAGGGGCAGGGAACTTaGGAACAACAGCTGGAAGAA +
Preference number: 4 (lower is better)
Translates to: QRTTMKATVPPKPALLCQEGQGT*EQQLEE
Trigger: TTCTTCCAGCTGTTGTTCTCAAGTTCCCTGCCCCTC...TTGGCACAGGAGTGCTGGCTTTGGAGGGACTGTGGCCTTCATCGTGGTCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR TCA 90 bp GTCTTCTACAGAGGGAAACATCTTTGGTCAGCTGGGTGCTCGCAGGACGCTGGCGAGACAAGCTCCAACTaGGTGCGGAACCTAGATGGG +
Preference number: 4 (lower is better)
Translates to: VFYRGKHLWSAGCSQDAGETSSN*VRNLDG
Trigger: CCCATCTAGGTTCCGCACTCAGTTGGAGCTTGTCTC...GCCAGCGTCCTGCGAGCACCCAGCTGACCAAAGATGTTTCCCTCTGTAGAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491190.5
CDS-3UTR GCA 90 bp GCCACAGTCCCTCCAAAGCCAGCACTCCTGTGCCAAAGCCCCTGCAGGTGCAGGAACATCATATCCTCCTaGTTGGCGTTGATGTCTGCT +
Preference number: 4 (lower is better)
Translates to: ATVPPKPALLCQSPCRCRNIISS*LALMSA
Trigger: AGCAGACATCAACGCCAAGCAGGAGGATATGATGTT...CCTGCACCTGCAGGGGCTTTGGCACAGGAGTGCTGGCTTTGGAGGGACTGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp CCAAAGCCAGCACTCCTGTGCCAAAGCCCCTGCAGGTGCAGGGTGGTGGCCTGTAACATCATATCCTCCTaGTTGGCGTTGATGTCTGCT +
Preference number: 4 (lower is better)
Translates to: PKPALLCQSPCRCRVVACNIISS*LALMSA
Trigger: AGCAGACATCAACGCCAAGCAGGAGGATATGATGTT...ACAGGCCACCACCCTGCACCTGCAGGGGCTTTGGCACAGGAGTGCTGGCTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp CACACACATTCCCACGGCTCCTTTCCACCTGTGCAGCAGCACCTGTTAGAAAACCCGATGCAGCTGATCTaGAGGAACACGGAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: HTHSHGSFPPVQQHLLENPMQLI*RNTEQA
Trigger: GGCCTGCTCCGTGTTCCTGCAGATCAGCTGCATCGG...GTTTTCTAACAGGTGCTGCTGCACAGGTGGAAAGGAGCCGTGGGAATGTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp ACACACACATTCCCACGGCTCCTTTCCACCTGTGCAGCAGCACCTGTTAGAAAAGCAGTGGACTCCACCTaGTGGGCGTGCAGGTACAGG +
Preference number: 4 (lower is better)
Translates to: THTFPRLLSTCAAAPVRKAVDST*WACRYR
Trigger: CCTGTACCTGCACGCCCAGCAGGTGGAGTCCACTGC...TTTTCTAACAGGTGCTGCTGCACAGGTGGAAAGGAGCCGTGGGAATGTGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp GAGTCTTCTACAGAGGGAAACATCTTTGGTCAGCTGGGTGCTCGCAGGACGCTGGGCAAAGTCGGCCAGTaGCTTGATGTGGGTCTTGCC +
Preference number: 4 (lower is better)
Translates to: ESSTEGNIFGQLGARRTLGKVGQ*LDVGLA
Trigger: GGCAAGACCCACATCAAGGCACTGGCCGACTTTGCC...CAGCGTCCTGCGAGCACCCAGCTGACCAAAGATGTTTCCCTCTGTAGAAGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp TGCAGGGTGGTGGCCTGTCTGAAGTTTAAAGGCTCACATAGAAAAGCAGACCCCACACGGTCCACCAGATaGCCTCAGAGGCGCTGCGTG +
Preference number: 4 (lower is better)
Translates to: CRVVACLKFKGSHRKADPTRSTR*PQRRCV
Trigger: CACGCAGCGCCTCTGAGGGCATCTGGTGGACCGTGT...GGGGTCTGCTTTTCTATGTGAGCCTTTAAACTTCAGACAGGCCACCACCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR GCA 90 bp TGGTACAGGTGGACATCAAAGTCACATTGTGGCAGCTGGCACAGAGCCACTGCCGGCACACAGAGAAGCTaGTTCCATGCCTCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: WYRWTSKSHCGSWHRATAGTQRS*FHASGG
Trigger: GCCTCCAGAGGCATGGAAGCAGCTTCTCTGTGTGCC...GGCAGTGGCTCTGTGCCAGCTGCCACAATGTGACTTTGATGTCCACCTGTACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR GCA 90 bp TGCAGGGTGGTGGCCTGTCTGAAGTTTAAAGGCTCACATAGAAAAGCAGACCCCCAAAGCCCCTGCAGGTaGAGGGTGGTGGCCTGTCTG +
Preference number: 4 (lower is better)
Translates to: CRVVACLKFKGSHRKADPQSPCR*RVVACL
Trigger: CAGACAGGCCACCACCCTGCACCTGCAGGGGCTTTG...GGGGTCTGCTTTTCTATGTGAGCCTTTAAACTTCAGACAGGCCACCACCCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp CTGGAATCTGTGGGCGCTGCCTCTGTAAGCCGCAAACGTCTGAAATCTCAGGGTCACTCTCGGGTCTCCTaGAAAGCCTGTCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: LESVGAASVSRKRLKSQGHSRVS*KACLWE
Trigger: CTCCCAGAGACAGGCTTTCCAGGAGACCCGAGAGTG...ACCCTGAGATTTCAGACGTTTGCGGCTTACAGAGGCAGCGCCCACAGATTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp CCCTGCAGGTGCAGGGTGGTGGCCTGTCTGAAGTTTAAAGGCTCACATAGAAAAAGCCGTTCCTGCTGCTaGTTCTCCCGCTGCGAGTGG +
Preference number: 4 (lower is better)
Translates to: PCRCRVVACLKFKGSHRKSRSCC*FSRCEW
Trigger: CCACTCGCAGCGGGAGAACCAGCAGCAGGAACGGCT...TTTTCTATGTGAGCCTTTAAACTTCAGACAGGCCACCACCCTGCACCTGCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp CACCACTGGCGGGCGATGTGGAGGGGCAGGGAACTTGAGAACAACAGCTGGAAGCTGCTTTCATCTCCATaGCAACATGACGGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: HHWRAMWRGRELENNSWKLLSSP*QHDGEG
Trigger: TCCTTCCCCGTCATGTTGCCATGGAGATGAAAGCAG...CTTCCAGCTGTTGTTCTCAAGTTCCCTGCCCCTCCACATCGCCCGCCAGTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp TTGGCGTCCTCTTGCCTCCCCCTCGTAATTAGTTCTGTTTCCCTCCTAGGGCACCCCGGACCAACGAGATaGCCTCGATCATGTCCATGC +
Preference number: 4 (lower is better)
Translates to: LASSCLPLVISSVSLLGHPGPTR*PRSCPC
Trigger: GCATGGACATGATCGAGGCCATCTCGTTGGTCCGGG...GTGCCCTAGGAGGGAAACAGAACTAATTACGAGGGGGAGGCAAGAGGACGCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp CAGCAAAGGCAGAAGCTGCTCTGGAGTCCAAGTGGAAAATCTCAGCAGCGCAGCGTAGCCTTGGTGATGTaGATGCGTCCTGCCTTGCCG +
Preference number: 4 (lower is better)
Translates to: QQRQKLLWSPSGKSQQRSVALVM*MRPALP
Trigger: CGGCAAGGCAGGACGCATCCACATCACCAAGGCTAC...GCTGCGCTGCTGAGATTTTCCACTTGGACTCCAGAGCAGCTTCTGCCTTTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp CAGAGGACCACGATGAAGGCCACAGTCCCTCCAAAGCCAGCACTCCTGTGCCAATGTGCCCGATGGAGTTaGTTCTCTGGCGGTTCATCT +
Preference number: 4 (lower is better)
Translates to: QRTTMKATVPPKPALLCQCARWS*FSGGSS
Trigger: AGATGAACCGCCAGAGAACCAACTCCATCGGGCACA...TTGGCACAGGAGTGCTGGCTTTGGAGGGACTGTGGCCTTCATCGTGGTCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp TGGTACAGGTGGACATCAAAGTCACATTGTGGCAGCTGGCACAGAGCCACTGCCGCCTATCAATGCTCCTaGCGTCAATGGCACGGCCCA +
Preference number: 4 (lower is better)
Translates to: WYRWTSKSHCGSWHRATAAYQCS*RQWHGP
Trigger: TGGGCCGTGCCATTGACGCCAGGAGCATTGATAGGC...GGCAGTGGCTCTGTGCCAGCTGCCACAATGTGACTTTGATGTCCACCTGTACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp TTGGCGTCCTCTTGCCTCCCCCTCGTAATTAGTTCTGTTTCCCTCCTAGGGCACGAAGAGCGTGACACCTaGCACCTCCACGATGAGCAC +
Preference number: 4 (lower is better)
Translates to: LASSCLPLVISSVSLLGHEERDT*HLHDEH
Trigger: GTGCTCATCGTGGAGGTGCCAGGTGTCACGCTCTTC...GTGCCCTAGGAGGGAAACAGAACTAATTACGAGGGGGAGGCAAGAGGACGCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp CAAAGGCAGAAGCTGCTCTGGAGTCCAAGTGGAAAATCTCAGCAGCGCAGCCCTGCCAGTGCCTTGATGTaGGTCTTGCCCACCTTGTCG +
Preference number: 4 (lower is better)
Translates to: QRQKLLWSPSGKSQQRSPASALM*VLPTLS
Trigger: CGACAAGGTGGGCAAGACCCACATCAAGGCACTGGC...AGGGCTGCGCTGCTGAGATTTTCCACTTGGACTCCAGAGCAGCTTCTGCCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp GTCTTCTACAGAGGGAAACATCTTTGGTCAGCTGGGTGCTCGCAGGACGCTGGCGGTCCATCAGCTTCATaGCAAAGTCGGCCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: VFYRGKHLWSAGCSQDAGGPSAS*QSRPVP
Trigger: AGGCACTGGCCGACTTTGCCATGAAGCTGATGGACC...GCCAGCGTCCTGCGAGCACCCAGCTGACCAAAGATGTTTCCCTCTGTAGAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp TGCTTGGCGTCCTCTTGCCTCCCCCTCGTAATTAGTTCTGTTTCCCTCCTAGGGCCAGCTGGTACGTGTTaGCAGCCAGCACCTGGTACA +
Preference number: 4 (lower is better)
Translates to: CLASSCLPLVISSVSLLGPAGTC*QPAPGT
Trigger: TGTACCAGGTGCTGGCTGCCAACACGTACCAGCTGG...CCCTAGGAGGGAAACAGAACTAATTACGAGGGGGAGGCAAGAGGACGCCAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp GTGTGGAGGGCACCACACTGCCTGTCGCAGGATGAGATTGCTTCCCTTGGTTCCCCGACGGGAACTTCTTaGAGCGGAATATCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: VWRAPHCLSQDEIASLGSPTGTS*SGISAA
Trigger: TGCTGCAGATATTCCGCTCCAAGAAGTTCCCGTCGG...GGAACCAAGGGAAGCAATCTCATCCTGCGACAGGCAGTGTGGTGCCCTCCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp GTACATACGTGTGCGTGTGTCAGAAAAGATGGGGCAGTGTGTCCATGCATCCTCCCCATGTGGTCCTGGTaGAAGGCGGCGCGGTTGCAA +
Preference number: 4 (lower is better)
Translates to: VHTCACVRKDGAVCPCILPMWSW*KAARLQ
Trigger: TTGCAACCGCGCCGCCTTCCACCAGGACCACATGGG...GAGGATGCATGGACACACTGCCCCATCTTTTCTGACACACGCACACGTATGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp CCAAAGCCAGCACTCCTGTGCCAAAGCCCCTGCAGGTGCAGGGTGGTGGCCTGTAGCAATGGAAAGATTTaGGCATGGGCCCTAAGGATT +
Preference number: 4 (lower is better)
Translates to: PKPALLCQSPCRCRVVACSNGKI*AWALRI
Trigger: AATCCTTAGGGCCCATGCCCAAATCTTTCCATTGCT...ACAGGCCACCACCCTGCACCTGCAGGGGCTTTGGCACAGGAGTGCTGGCTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp CCGCAAACGTCTGAAATCTCAGGGTGTGGAGGGCACCACACTGCCTGTCGCAGGATCAAAGTCACATTGTaGCAGCTGGCACAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: PQTSEISGCGGHHTACRRIKVTL*QLAQSH
Trigger: GTGGCTCTGTGCCAGCTGCCACAATGTGACTTTGAT...CCTGCGACAGGCAGTGTGGTGCCCTCCACACCCTGAGATTTCAGACGTTTGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp ACACACACATTCCCACGGCTCCTTTCCACCTGTGCAGCAGCACCTGTTAGAAAACAGTCACTGCTGGGATaGGAGAGGGGTCCCCATGGG +
Preference number: 4 (lower is better)
Translates to: THTFPRLLSTCAAAPVRKQSLLG*ERGPHG
Trigger: CCCATGGGGACCCCTCTCCCATCCCAGCAGTGACTG...TTTTCTAACAGGTGCTGCTGCACAGGTGGAAAGGAGCCGTGGGAATGTGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR TCA 90 bp CACCAGCAAAGGCAGAAGCTGCTCTGGAGTCCAAGTGGAAAATCTCAGCAGCGCGGGAGGTCCCGTTGTTaGAGAAGTCTATGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: HQQRQKLLWSPSGKSQQRGRSRC*RSLWRW
Trigger: CCAACGCCATAGACTTCTTCAACAACGGGACCTCCC...GCGCTGCTGAGATTTTCCACTTGGACTCCAGAGCAGCTTCTGCCTTTGCTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR TCA 90 bp CAAAGGCAGAAGCTGCTCTGGAGTCCAAGTGGAAAATCTCAGCAGCGCAGCCCTGGCCAGCACAAAGACTaGGATGATGATGGGCGTCAC +
Preference number: 4 (lower is better)
Translates to: QRQKLLWSPSGKSQQRSPGQHKD*DDDGRH
Trigger: GTGACGCCCATCATCATCTCAGTCTTTGTGCTGGCC...AGGGCTGCGCTGCTGAGATTTTCCACTTGGACTCCAGAGCAGCTTCTGCCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR TCA 90 bp CTTCTACAGAGGGAAACATCTTTGGTCAGCTGGGTGCTCGCAGGACGCTGGCACCCTTCAGGCTTGGACTaGAACCACGTCACTGGCTTT +
Preference number: 4 (lower is better)
Translates to: LLQRETSLVSWVLAGRWHPSGLD*NHVTGF
Trigger: AAAGCCAGTGACGTGGTTTCAGTCCAAGCCTGAAGG...GTGCCAGCGTCCTGCGAGCACCCAGCTGACCAAAGATGTTTCCCTCTGTAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491190.5
CDS-3UTR TCA 90 bp CACCAGCAAAGGCAGAAGCTGCTCTGGAGTCCAAGTGGAAAATCTCAGCAGCGCCTGCCTGTCGCAGGATaGGATTGCTTCCCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: HQQRQKLLWSPSGKSQQRLPVAG*DCFPWF
Trigger: GAACCAAGGGAAGCAATCTCATCCTGCGACAGGCAG...GCGCTGCTGAGATTTTCCACTTGGACTCCAGAGCAGCTTCTGCCTTTGCTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR GCA 90 bp GGAAGCCATGACCATGGGAGAACATGGGATGAACTCAGCACACACACTTTACTCAGGAGCCGTTCCTGCTaGTGGTTCTCCCGCTGCGAG +
Preference number: 4 (lower is better)
Translates to: GSHDHGRTWDELSTHTLLRSRSC*WFSRCE
Trigger: CTCGCAGCGGGAGAACCAGCAGCAGGAACGGCTCCT...GAGTAAAGTGTGTGTGCTGAGTTCATCCCATGTTCTCCCATGGTCATGGCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR GCA 90 bp TTGGCGTCCTCTTGCCTCCCCCTCGTAATTAGTTCTGTTTCCCTCCTAGGGCACGACCAGACGTCGAACTaGCACTTCCTGAGACCAAGG +
Preference number: 4 (lower is better)
Translates to: LASSCLPLVISSVSLLGHDQTSN*HFLRPR
Trigger: CCTTGGTCTCAGGAAGTGGCAGTTCGACGTCTGGTC...GTGCCCTAGGAGGGAAACAGAACTAATTACGAGGGGGAGGCAAGAGGACGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp GAGTCTTCTACAGAGGGAAACATCTTTGGTCAGCTGGGTGCTCGCAGGACGCTGCCTTGGACACCTGGTTaGCACCCAGGTGGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: ESSTEGNIFGQLGARRTLPWTPG*HPGGCR
Trigger: TCTACAACCACCTGGGTGGCAACCAGGTGTCCAAGG...CAGCGTCCTGCGAGCACCCAGCTGACCAAAGATGTTTCCCTCTGTAGAAGACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp CTAAAGCTGGGCTCTACCCATTCCTCTGCCTGGTTTGCCGGTGGAGGTCAAGGCAGCAAAGGCAGAAGCTaGTCTGGAGTCCAAGTGGAA +
Preference number: 4 (lower is better)
Translates to: LKLGSTHSSAWFAGGGQGSKGRS*SGVQVE
Trigger: TTCCACTTGGACTCCAGAGCAGCTTCTGCCTTTGCT...GCCTTGACCTCCACCGGCAAACCAGGCAGAGGAATGGGTAGAGCCCAGCTTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR GCA 90 bp ACACACACATTCCCACGGCTCCTTTCCACCTGTGCAGCAGCACCTGTTAGAAAACCCTTGTCTGGGCCGTaGCACACACACATTCCCACG +
Preference number: 4 (lower is better)
Translates to: THTFPRLLSTCAAAPVRKPLSGP*HTHIPT
Trigger: CGTGGGAATGTGTGTGTGGCACGGCCCAGACAAGGG...TTTTCTAACAGGTGCTGCTGCACAGGTGGAAAGGAGCCGTGGGAATGTGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp ACGATGAAGGCCACAGTCCCTCCAAAGCCAGCACTCCTGTGCCAAAGCCCCTGCACGTCAGGATGGCAATaGAGAACTCAAAGGATGGAG +
Preference number: 4 (lower is better)
Translates to: TMKATVPPKPALLCQSPCTSGWQ*RTQRME
Trigger: CTCCATCCTTTGAGTTCTGCATTGCCATCCTGACGT...GCAGGGGCTTTGGCACAGGAGTGCTGGCTTTGGAGGGACTGTGGCCTTCATCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR GCA 90 bp GGAGGGTGTGTGCATGTGTGTACATACGTGTGCGTGTGTCAGAAAAGATGGGGCACTGTCACCAGTCACTaGTGGGATGGGAGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: GGCVHVCTYVCVCQKRWGTVTSH*WDGRGV
Trigger: GACCCCTCTCCCATCCCAGCAGTGACTGGTGACAGT...GCCCCATCTTTTCTGACACACGCACACGTATGTACACACATGCACACACCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp TTGGCGTCCTCTTGCCTCCCCCTCGTAATTAGTTCTGTTTCCCTCCTAGGGCACATCTCCTTGGACACCTaGTTGCCACCCAGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: LASSCLPLVISSVSLLGHISLDT*LPPRWL
Trigger: CAACCACCTGGGTGGCAACCAGGTGTCCAAGGAGAT...GTGCCCTAGGAGGGAAACAGAACTAATTACGAGGGGGAGGCAAGAGGACGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp TTGGCGTCCTCTTGCCTCCCCCTCGTAATTAGTTCTGTTTCCCTCCTAGGGCACGGGCGTTCTTGTCCTTaGGGTCTTCAAAGCCCATCC +
Preference number: 4 (lower is better)
Translates to: LASSCLPLVISSVSLLGHGRSCP*GLQSPS
Trigger: GGATGGGCTTTGAAGACCCCAAGGACAAGAACGCCC...GTGCCCTAGGAGGGAAACAGAACTAATTACGAGGGGGAGGCAAGAGGACGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp CAAAGGCAGAAGCTGCTCTGGAGTCCAAGTGGAAAATCTCAGCAGCGCAGCCCTGGGTGCTGTTCATCTTaGACCGCACGATCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: QRQKLLWSPSGKSQQRSPGCCSS*TARSSW
Trigger: CCAGGAAGATCGTGCGGTCCAAGATGAACAGCACCC...AGGGCTGCGCTGCTGAGATTTTCCACTTGGACTCCAGAGCAGCTTCTGCCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp AGCACGGGACAGACTCAGGCTTGGCAGTTTTGGGTCCACACACTTTGCTTCTCAATGTCTGTGGTGACCTaGATGCGGTCGGGTACACCG +
Preference number: 4 (lower is better)
Translates to: STGQTQAWQFWVHTLCFSMSVVT*MRSGTP
Trigger: CGGTGTACCCGACCGCATCCAGGTCACCACAGACAT...TGAGAAGCAAAGTGTGTGGACCCAAAACTGCCAAGCCTGAGTCTGTCCCGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp CAGCAAAGGCAGAAGCTGCTCTGGAGTCCAAGTGGAAAATCTCAGCAGCGCAGCTTGGCAGCCAGCACCTaGTACATGTCTGTGGTGACC +
Preference number: 4 (lower is better)
Translates to: QQRQKLLWSPSGKSQQRSLAAST*YMSVVT
Trigger: GGTCACCACAGACATGTACCAGGTGCTGGCTGCCAA...GCTGCGCTGCTGAGATTTTCCACTTGGACTCCAGAGCAGCTTCTGCCTTTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp TGTGCGTGGAGGTGTGGGCAGAGGACCACGATGAAGGCCACAGTCCCTCCAAAGAGGCAGAAGCTGCTCTaGAGTCCAAGTGGAAAATCT +
Preference number: 4 (lower is better)
Translates to: CAWRCGQRTTMKATVPPKRQKLL*SPSGKS
Trigger: AGATTTTCCACTTGGACTCCAGAGCAGCTTCTGCCT...CTTTGGAGGGACTGTGGCCTTCATCGTGGTCCTCTGCCCACACCTCCACGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp CACGATGAAGGCCACAGTCCCTCCAAAGCCAGCACTCCTGTGCCAAAGCCCCTGAGGCAGAAGCTGCTCTaGAGTCCAAGTGGAAAATCT +
Preference number: 4 (lower is better)
Translates to: HDEGHSPSKASTPVPKPLRQKLL*SPSGKS
Trigger: AGATTTTCCACTTGGACTCCAGAGCAGCTTCTGCCT...CAGGGGCTTTGGCACAGGAGTGCTGGCTTTGGAGGGACTGTGGCCTTCATCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp CAAAGGCAGAAGCTGCTCTGGAGTCCAAGTGGAAAATCTCAGCAGCGCAGCCCTACCCATTCCTCTGCCTaGTTTGCCGGTGGAGGTCAA +
Preference number: 4 (lower is better)
Translates to: QRQKLLWSPSGKSQQRSPTHSSA*FAGGGQ
Trigger: TTGACCTCCACCGGCAAACCAGGCAGAGGAATGGGT...AGGGCTGCGCTGCTGAGATTTTCCACTTGGACTCCAGAGCAGCTTCTGCCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp AGCACGGGACAGACTCAGGCTTGGCAGTTTTGGGTCCACACACTTTGCTTCTCAAAAGCAGGCCTCCTGTaGCCGACGTCAGGATGGCAA +
Preference number: 4 (lower is better)
Translates to: STGQTQAWQFWVHTLCFSKAGLL*PTSGWQ
Trigger: TTGCCATCCTGACGTCGGCCACAGGAGGCCTGCTTT...TGAGAAGCAAAGTGTGTGGACCCAAAACTGCCAAGCCTGAGTCTGTCCCGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp GAGTCTTCTACAGAGGGAAACATCTTTGGTCAGCTGGGTGCTCGCAGGACGCTGTCACACAGGCTCCACTaGGAGGTCCCGTTGTTGAAG +
Preference number: 4 (lower is better)
Translates to: ESSTEGNIFGQLGARRTLSHRLH*EVPLLK
Trigger: CTTCAACAACGGGACCTCCCAGTGGAGCCTGTGTGA...CAGCGTCCTGCGAGCACCCAGCTGACCAAAGATGTTTCCCTCTGTAGAAGACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491190.5
CDS-3UTR TCA 90 bp CAAAGCACCTGGCCTTCTGTAAGCACTCTGGAATCTGTGGGCGCTGCCTCTGTACCTCCTGCTTGGCGTTaGTGTCTGCTTTCATCTCCA +
Preference number: 4 (lower is better)
Translates to: QSTWPSVSTLESVGAASVPPAWR*CLLSSP
Trigger: TGGAGATGAAAGCAGACATCAACGCCAAGCAGGAGG...TACAGAGGCAGCGCCCACAGATTCCAGAGTGCTTACAGAAGGCCAGGTGCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR TCA 90 bp CACACACATTCCCACGGCTCCTTTCCACCTGTGCAGCAGCACCTGTTAGAAAACTGTACTCGCCCGCTGTaGATTCCCACACGCATGTTC +
Preference number: 4 (lower is better)
Translates to: HTHSHGSFPPVQQHLLENCTRPL*IPTRMF
Trigger: GAACATGCGTGTGGGAATTCACAGCGGGCGAGTACA...GTTTTCTAACAGGTGCTGCTGCACAGGTGGAAAGGAGCCGTGGGAATGTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR TCA 90 bp TTGGCGTCCTCTTGCCTCCCCCTCGTAATTAGTTCTGTTTCCCTCCTAGGGCACCAGGGCTTTGTTCCTTaGCTCCAGAGGGAAAGTAGG +
Preference number: 4 (lower is better)
Translates to: LASSCLPLVISSVSLLGHQGFVP*LQRESR
Trigger: CCTACTTTCCCTCTGGAGTCAAGGAACAAAGCCCTG...GTGCCCTAGGAGGGAAACAGAACTAATTACGAGGGGGAGGCAAGAGGACGCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491190.5
CDS-3UTR GCA 90 bp ACACACACATTCCCACGGCTCCTTTCCACCTGTGCAGCAGCACCTGTTAGAAAACAGCCGGATAGTGGGTaGAGACACCCACGATGTTGG +
Preference number: 4 (lower is better)
Translates to: THTFPRLLSTCAAAPVRKQPDSG*RHPRCW
Trigger: CCAACATCGTGGGTGTCTGCACCCACTATCCGGCTG...TTTTCTAACAGGTGCTGCTGCACAGGTGGAAAGGAGCCGTGGGAATGTGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp GGAGGGTGTGTGCATGTGTGTACATACGTGTGCGTGTGTCAGAAAAGATGGGGCGACCAGACGTCGAACTaGCACTTCCTGAGACCAAGG +
Preference number: 4 (lower is better)
Translates to: GGCVHVCTYVCVCQKRWGDQTSN*HFLRPR
Trigger: CCTTGGTCTCAGGAAGTGGCAGTTCGACGTCTGGTC...GCCCCATCTTTTCTGACACACGCACACGTATGTACACACATGCACACACCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR GCA 90 bp CACACACATTCCCACGGCTCCTTTCCACCTGTGCAGCAGCACCTGTTAGAAAACAGGTCAGGAGGAACTTaGGGACGTGCTCAGACCGAA +
Preference number: 4 (lower is better)
Translates to: HTHSHGSFPPVQQHLLENRSGGT*GRAQTE
Trigger: TTCGGTCTGAGCACGTCCGCAAGTTCCTCCTGACCT...GTTTTCTAACAGGTGCTGCTGCACAGGTGGAAAGGAGCCGTGGGAATGTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp GAAGCTGCTCTGGAGTCCAAGTGGAAAATCTCAGCAGCGCAGCCCTGCGGGCTGAATCGGTCGTCTACCTaGTTGGAGTACTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: EAALESKWKISAAQPCGLNRSST*LEYFFS
Trigger: AGAGAAGAAGTACTCCAAGCAGGTAGACGACCGATT...CAGCCCGCAGGGCTGCGCTGCTGAGATTTTCCACTTGGACTCCAGAGCAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp ACACACACATTCCCACGGCTCCTTTCCACCTGTGCAGCAGCACCTGTTAGAAAAGATGTTGTGCTCCTGTaGCAAGCAGCCCAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: THTFPRLLSTCAAAPVRKDVVLL*QAAQQV
Trigger: GACCTGCTGGGCTGCTTGGCACAGGAGCACAACATC...TTTTCTAACAGGTGCTGCTGCACAGGTGGAAAGGAGCCGTGGGAATGTGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp TTGGCGTCCTCTTGCCTCCCCCTCGTAATTAGTTCTGTTTCCCTCCTAGGGCACTTCTCCTCTGTGGCCTaGAGTTTCCAGAGGAAGTCG +
Preference number: 4 (lower is better)
Translates to: LASSCLPLVISSVSLLGHFSSVA*SFQRKS
Trigger: CGACTTCCTCTGGAAACTGCAGGCCACAGAGGAGAA...GTGCCCTAGGAGGGAAACAGAACTAATTACGAGGGGGAGGCAAGAGGACGCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp AATCTGAGCATATGGTACCCCAAAAGCACACACCCACTGCTCTGGTGGTACCTTGGTCCGAAATGGAGTTaGCTCCGAGGTGGGGTCGCA +
Preference number: 4 (lower is better)
Translates to: NLSIWYPKSTHPLLWWYLGPKWS*LRGGVA
Trigger: TGCGACCCCACCTCGGAGGCAACTCCATTTCGGACC...AAGGTACCACCAGAGCAGTGGGTGTGTGCTTTTGGGGTACCATATGCTCAGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR GCA 90 bp TGCTTGGCGTCCTCTTGCCTCCCCCTCGTAATTAGTTCTGTTTCCCTCCTAGGGTGCTTGGCGTCCTCTTaGCTCCCCCTCGTAATTAGT +
Preference number: 4 (lower is better)
Translates to: CLASSCLPLVISSVSLLGCLASS*LPLVIS
Trigger: ACTAATTACGAGGGGGAGGCAAGAGGACGCCAAGCA...CCCTAGGAGGGAAACAGAACTAATTACGAGGGGGAGGCAAGAGGACGCCAAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp CACACACATTCCCACGGCTCCTTTCCACCTGTGCAGCAGCACCTGTTAGAAAACTGGAGGGCACCACACTaGCTGTCGCAGGATGAGATT +
Preference number: 4 (lower is better)
Translates to: HTHSHGSFPPVQQHLLENWRAPH*LSQDEI
Trigger: AATCTCATCCTGCGACAGGCAGTGTGGTGCCCTCCA...GTTTTCTAACAGGTGCTGCTGCACAGGTGGAAAGGAGCCGTGGGAATGTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR GCA 90 bp GTGGACTCTAAAGCTGGGCTCTACCCATTCCTCTGCCTGGTTTGCCGGTGGAGGTGGGTCCACACACTTTaGTTCTCAGAGCTGTGTTCA +
Preference number: 4 (lower is better)
Translates to: VDSKAGLYPFLCLVCRWRWVHTL*FSELCS
Trigger: TGAACACAGCTCTGAGAAGCAAAGTGTGTGGACCCA...CCTCCACCGGCAAACCAGGCAGAGGAATGGGTAGAGCCCAGCTTTAGAGTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp CCCTGCAGGTGCAGGGTGGTGGCCTGTCTGAAGTTTAAAGGCTCACATAGAAAACACTCTCGGGTCTCCTaGAAAGCCTGTCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: PCRCRVVACLKFKGSHRKHSRVS*KACLWE
Trigger: CTCCCAGAGACAGGCTTTCCAGGAGACCCGAGAGTG...TTTTCTATGTGAGCCTTTAAACTTCAGACAGGCCACCACCCTGCACCTGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp CACCAGCAAAGGCAGAAGCTGCTCTGGAGTCCAAGTGGAAAATCTCAGCAGCGCTGTGCCCGATGGAGTTaGTTCTCTGGCGGTTCATCT +
Preference number: 4 (lower is better)
Translates to: HQQRQKLLWSPSGKSQQRCARWS*FSGGSS
Trigger: AGATGAACCGCCAGAGAACCAACTCCATCGGGCACA...GCGCTGCTGAGATTTTCCACTTGGACTCCAGAGCAGCTTCTGCCTTTGCTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp AGCACGGGACAGACTCAGGCTTGGCAGTTTTGGGTCCACACACTTTGCTTCTCAATCTCCTTGGACACCTaGTTGCCACCCAGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: STGQTQAWQFWVHTLCFSISLDT*LPPRWL
Trigger: CAACCACCTGGGTGGCAACCAGGTGTCCAAGGAGAT...TGAGAAGCAAAGTGTGTGGACCCAAAACTGCCAAGCCTGAGTCTGTCCCGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp CTTCTACAGAGGGAAACATCTTTGGTCAGCTGGGTGCTCGCAGGACGCTGGCACGGCACGATGGTGATCTaGACAAAGCAGATGAAGAGG +
Preference number: 4 (lower is better)
Translates to: LLQRETSLVSWVLAGRWHGTMVI*TKQMKR
Trigger: CCTCTTCATCTGCTTTGTCCAGATCACCATCGTGCC...GTGCCAGCGTCCTGCGAGCACCCAGCTGACCAAAGATGTTTCCCTCTGTAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp ACACACACATTCCCACGGCTCCTTTCCACCTGTGCAGCAGCACCTGTTAGAAAAGGAGAGGGTCTGCAGTaGGGAGGGGAAGAGCTTTAC +
Preference number: 4 (lower is better)
Translates to: THTFPRLLSTCAAAPVRKGEGLQ*GGEELY
Trigger: GTAAAGCTCTTCCCCTCCCCACTGCAGACCCTCTCC...TTTTCTAACAGGTGCTGCTGCACAGGTGGAAAGGAGCCGTGGGAATGTGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp TTGGCGTCCTCTTGCCTCCCCCTCGTAATTAGTTCTGTTTCCCTCCTAGGGCACAGCCTGCAAAGCACCTaGCCTTCTGTAAGCACTCTG +
Preference number: 4 (lower is better)
Translates to: LASSCLPLVISSVSLLGHSLQST*PSVSTL
Trigger: CAGAGTGCTTACAGAAGGCCAGGTGCTTTGCAGGCT...GTGCCCTAGGAGGGAAACAGAACTAATTACGAGGGGGAGGCAAGAGGACGCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp GAGTCTTCTACAGAGGGAAACATCTTTGGTCAGCTGGGTGCTCGCAGGACGCTGGAGCCCAGTGAGAGGTaGTACAGGTGGACATCAAAG +
Preference number: 4 (lower is better)
Translates to: ESSTEGNIFGQLGARRTLEPSER*YRWTSK
Trigger: CTTTGATGTCCACCTGTACCACCTCTCACTGGGCTC...CAGCGTCCTGCGAGCACCCAGCTGACCAAAGATGTTTCCCTCTGTAGAAGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp CTTCTACAGAGGGAAACATCTTTGGTCAGCTGGGTGCTCGCAGGACGCTGGCACCAGGCTTGGCAGTTTTaGGTCCACACACTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: LLQRETSLVSWVLAGRWHQAWQF*VHTLCF
Trigger: GAAGCAAAGTGTGTGGACCCAAAACTGCCAAGCCTG...GTGCCAGCGTCCTGCGAGCACCCAGCTGACCAAAGATGTTTCCCTCTGTAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp TTGGCGTCCTCTTGCCTCCCCCTCGTAATTAGTTCTGTTTCCCTCCTAGGGCACTGGCCGACGTCAGGATaGCAATGCAGAACTCAAAGG +
Preference number: 4 (lower is better)
Translates to: LASSCLPLVISSVSLLGHWPTSG*QCRTQR
Trigger: CCTTTGAGTTCTGCATTGCCATCCTGACGTCGGCCA...GTGCCCTAGGAGGGAAACAGAACTAATTACGAGGGGGAGGCAAGAGGACGCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR CAA 72 bp ACAGACTCAGGCTTGGCAGTTTTGGGTCCACACACTTaGCTTCTCAGAGCTGTGTTCAGTTGGTGTGCGGGG +
Preference number: 4 (lower is better)
Translates to: TDSGLAVLGPHT*LLRAVFSWCAG
Trigger: CCCCGCACACCAACTGAACACAGCTCTGAGAAGCAAAGTGTGTGGACCCAAAACTGCCAAGCCTGAGTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR CAA 72 bp CAGCAGAAGCACGGGACAGACTCAGGCTTGGCAGTTTaGGGTCCACACACTTTGCTTCTCAGAGCTGTGTTC +
Preference number: 4 (lower is better)
Translates to: QQKHGTDSGLAV*GPHTLLLRAVF
Trigger: GAACACAGCTCTGAGAAGCAAAGTGTGTGGACCCAAAACTGCCAAGCCTGAGTCTGTCCCGTGCTTCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
3UTR CAA 72 bp AGGATGGAGCAGCAGAAGCACGGGACAGACTCAGGCTaGGCAGTTTTGGGTCCACACACTTTGCTTCTCAGA +
Preference number: 4 (lower is better)
Translates to: RMEQQKHGTDSG*AVLGPHTLLLR
Trigger: TCTGAGAAGCAAAGTGTGTGGACCCAAAACTGCCAAGCCTGAGTCTGTCCCGTGCTTCTGCTGCTCCATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR TCA 90 bp GGAGGGTGTGTGCATGTGTGTACATACGTGTGCGTGTGTCAGAAAAGATGGGGCTCTGGACAAAGCAGATaGAGAGGAAGACGAGCGAGG +
Preference number: 4 (lower is better)
Translates to: GGCVHVCTYVCVCQKRWGSGQSR*RGRRAR
Trigger: CCTCGCTCGTCTTCCTCTTCATCTGCTTTGTCCAGA...GCCCCATCTTTTCTGACACACGCACACGTATGTACACACATGCACACACCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR GCA 90 bp AGCACGGGACAGACTCAGGCTTGGCAGTTTTGGGTCCACACACTTTGCTTCTCAAGGAACTTGCGGACGTaGTCAGACCGAAGCCTATCA +
Preference number: 4 (lower is better)
Translates to: STGQTQAWQFWVHTLCFSRNLRT*SDRSLS
Trigger: TGATAGGCTTCGGTCTGAGCACGTCCGCAAGTTCCT...TGAGAAGCAAAGTGTGTGGACCCAAAACTGCCAAGCCTGAGTCTGTCCCGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR GCA 90 bp AATCTGAGCATATGGTACCCCAAAAGCACACACCCACTGCTCTGGTGGTACCTTGATGTTGTGCTCCTGTaGCAAGCAGCCCAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: NLSIWYPKSTHPLLWWYLDVVLL*QAAQQV
Trigger: GACCTGCTGGGCTGCTTGGCACAGGAGCACAACATC...AAGGTACCACCAGAGCAGTGGGTGTGTGCTTTTGGGGTACCATATGCTCAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR GCA 90 bp TGCAGGGTGGTGGCCTGTCTGAAGTTTAAAGGCTCACATAGAAAAGCAGACCCCTTGATCTTCTCCAGCTaGCGGAACCGATCCTCGCTG +
Preference number: 4 (lower is better)
Translates to: CRVVACLKFKGSHRKADPLIFSS*RNRSSL
Trigger: CAGCGAGGATCGGTTCCGGCAGCTGGAGAAGATCAA...GGGGTCTGCTTTTCTATGTGAGCCTTTAAACTTCAGACAGGCCACCACCCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR GCA 90 bp GGAAGCCATGACCATGGGAGAACATGGGATGAACTCAGCACACACACTTTACTCTTCCTCGTCCCAGCCTaGAAAGCACCTGGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: GSHDHGRTWDELSTHTLLFLVPA*KAPGLL
Trigger: CAGAAGGCCAGGTGCTTTGCAGGCTGGGACGAGGAA...GAGTAAAGTGTGTGTGCTGAGTTCATCCCATGTTCTCCCATGGTCATGGCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR GCA 90 bp CAGCAAAGGCAGAAGCTGCTCTGGAGTCCAAGTGGAAAATCTCAGCAGCGCAGCCAATGCCACCTTGGTTaGATGCTCAGGGCTTTGTTC +
Preference number: 4 (lower is better)
Translates to: QQRQKLLWSPSGKSQQRSQCHLG*MLRALF
Trigger: GAACAAAGCCCTGAGCATGCAACCAAGGTGGCATTG...GCTGCGCTGCTGAGATTTTCCACTTGGACTCCAGAGCAGCTTCTGCCTTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491190.5
CDS-3UTR CCA 90 bp CACCAGCAAAGGCAGAAGCTGCTCTGGAGTCCAAGTGGAAAATCTCAGCAGCGCCTGCTTTCATCTCCATaGCAACATGACGGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: HQQRQKLLWSPSGKSQQRLLSSP*QHDGEG
Trigger: TCCTTCCCCGTCATGTTGCCATGGAGATGAAAGCAG...GCGCTGCTGAGATTTTCCACTTGGACTCCAGAGCAGCTTCTGCCTTTGCTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp CAAAGGCAGAAGCTGCTCTGGAGTCCAAGTGGAAAATCTCAGCAGCGCAGCCCTATGGAGTTGGTTCTCTaGCGGTTCATCTTGGCGATC +
Preference number: 4 (lower is better)
Translates to: QRQKLLWSPSGKSQQRSPMELVL*RFILAI
Trigger: GATCGCCAAGATGAACCGCCAGAGAACCAACTCCAT...AGGGCTGCGCTGCTGAGATTTTCCACTTGGACTCCAGAGCAGCTTCTGCCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp GAGTCTTCTACAGAGGGAAACATCTTTGGTCAGCTGGGTGCTCGCAGGACGCTGATGGAGTTGGTTCTCTaGCGGTTCATCTTGGCGATC +
Preference number: 4 (lower is better)
Translates to: ESSTEGNIFGQLGARRTLMELVL*RFILAI
Trigger: GATCGCCAAGATGAACCGCCAGAGAACCAACTCCAT...CAGCGTCCTGCGAGCACCCAGCTGACCAAAGATGTTTCCCTCTGTAGAAGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp CAGCAAAGGCAGAAGCTGCTCTGGAGTCCAAGTGGAAAATCTCAGCAGCGCAGCAGCATGAATATGGAGTaGGGCACGATGGTGATCTGG +
Preference number: 4 (lower is better)
Translates to: QQRQKLLWSPSGKSQQRSSMNME*GTMVIW
Trigger: CCAGATCACCATCGTGCCCCACTCCATATTCATGCT...GCTGCGCTGCTGAGATTTTCCACTTGGACTCCAGAGCAGCTTCTGCCTTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp TTGGCGTCCTCTTGCCTCCCCCTCGTAATTAGTTCTGTTTCCCTCCTAGGGCACAGCATGAATATGGAGTaGGGCACGATGGTGATCTGG +
Preference number: 4 (lower is better)
Translates to: LASSCLPLVISSVSLLGHSMNME*GTMVIW
Trigger: CCAGATCACCATCGTGCCCCACTCCATATTCATGCT...GTGCCCTAGGAGGGAAACAGAACTAATTACGAGGGGGAGGCAAGAGGACGCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp AATCTGAGCATATGGTACCCCAAAAGCACACACCCACTGCTCTGGTGGTACCTTGCCAGTGCCTTGATGTaGGTCTTGCCCACCTTGTCG +
Preference number: 4 (lower is better)
Translates to: NLSIWYPKSTHPLLWWYLASALM*VLPTLS
Trigger: CGACAAGGTGGGCAAGACCCACATCAAGGCACTGGC...AAGGTACCACCAGAGCAGTGGGTGTGTGCTTTTGGGGTACCATATGCTCAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp CACCAGCAAAGGCAGAAGCTGCTCTGGAGTCCAAGTGGAAAATCTCAGCAGCGCCGTCACTGGCTTTTCTaGTCCTCCAGCTTACAGACA +
Preference number: 4 (lower is better)
Translates to: HQQRQKLLWSPSGKSQQRRHWLF*SSSLQT
Trigger: TGTCTGTAAGCTGGAGGACCAGAAAAGCCAGTGACG...GCGCTGCTGAGATTTTCCACTTGGACTCCAGAGCAGCTTCTGCCTTTGCTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491190.5
CDS-3UTR CCA 90 bp CACACACATTCCCACGGCTCCTTTCCACCTGTGCAGCAGCACCTGTTAGAAAACCTGAAACCACGTCACTaGCTTTTCTGGTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: HTHSHGSFPPVQQHLLENLKPRH*LFWSSS
Trigger: GCTGGAGGACCAGAAAAGCCAGTGACGTGGTTTCAG...GTTTTCTAACAGGTGCTGCTGCACAGGTGGAAAGGAGCCGTGGGAATGTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491190.5
CDS-3UTR CCA 90 bp GACTCTAAAGCTGGGCTCTACCCATTCCTCTGCCTGGTTTGCCGGTGGAGGTCAGCTCTGGTGGTACCTTaGAAAACCCAAAACTGCCAA +
Preference number: 4 (lower is better)
Translates to: DSKAGLYPFLCLVCRWRSALVVP*KTQNCQ
Trigger: TTGGCAGTTTTGGGTTTTCCAAGGTACCACCAGAGC...TGACCTCCACCGGCAAACCAGGCAGAGGAATGGGTAGAGCCCAGCTTTAGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp CACCAGCAAAGGCAGAAGCTGCTCTGGAGTCCAAGTGGAAAATCTCAGCAGCGCGACCATGGGAGAACATaGGATGAACTCAGCACACAC +
Preference number: 4 (lower is better)
Translates to: HQQRQKLLWSPSGKSQQRDHGRT*DELSTH
Trigger: GTGTGTGCTGAGTTCATCCCATGTTCTCCCATGGTC...GCGCTGCTGAGATTTTCCACTTGGACTCCAGAGCAGCTTCTGCCTTTGCTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR TCA 90 bp CCCTGCAGGTGCAGGGTGGTGGCCTGTCTGAAGTTTAAAGGCTCACATAGAAAATCTGGACAAAGCAGATaGAGAGGAAGACGAGCGAGG +
Preference number: 4 (lower is better)
Translates to: PCRCRVVACLKFKGSHRKSGQSR*RGRRAR
Trigger: CCTCGCTCGTCTTCCTCTTCATCTGCTTTGTCCAGA...TTTTCTATGTGAGCCTTTAAACTTCAGACAGGCCACCACCCTGCACCTGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR TCA 90 bp CACACACATTCCCACGGCTCCTTTCCACCTGTGCAGCAGCACCTGTTAGAAAACGGGTGGTGGCCTGTCTaGAGTTTAAAGGCTCACATA +
Preference number: 4 (lower is better)
Translates to: HTHSHGSFPPVQQHLLENGWWPV*SLKAHI
Trigger: TATGTGAGCCTTTAAACTTCAGACAGGCCACCACCC...GTTTTCTAACAGGTGCTGCTGCACAGGTGGAAAGGAGCCGTGGGAATGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR TCA 90 bp TGCAGGGTGGTGGCCTGTCTGAAGTTTAAAGGCTCACATAGAAAAGCAGACCCCTTGCATCCCCCAGTCTaGGTGAACATCTCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: CRVVACLKFKGSHRKADPLHPPV*VNISRK
Trigger: CTTCCTGGAGATGTTCACTCAGACTGGGGGATGCAA...GGGGTCTGCTTTTCTATGTGAGCCTTTAAACTTCAGACAGGCCACCACCCTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp ATCCTCCTACTTAATCTGAGCATATGGTACCCCAAAAGCACACACCCACTGCTCGTGGGTTGTGCCCGATaGAGTTGGTTCTCTGGCGGT +
Preference number: 4 (lower is better)
Translates to: ILLLNLSIWYPKSTHPLLVGCAR*SWFSGG
Trigger: ACCGCCAGAGAACCAACTCCATCGGGCACAACCCAC...GAGCAGTGGGTGTGTGCTTTTGGGGTACCATATGCTCAGATTAAGTAGGAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp AATCTGAGCATATGGTACCCCAAAAGCACACACCCACTGCTCTGGTGGTACCTTTGCTCCTGGCGTCAATaGCACGGCCCAGAAACTCAT +
Preference number: 4 (lower is better)
Translates to: NLSIWYPKSTHPLLWWYLCSWRQ*HGPETH
Trigger: ATGAGTTTCTGGGCCGTGCCATTGACGCCAGGAGCA...AAGGTACCACCAGAGCAGTGGGTGTGTGCTTTTGGGGTACCATATGCTCAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp GTCTTCTACAGAGGGAAACATCTTTGGTCAGCTGGGTGCTCGCAGGACGCTGGCGGTCGTCTACCTGCTTaGAGTACTTCTTCTCTAAGT +
Preference number: 4 (lower is better)
Translates to: VFYRGKHLWSAGCSQDAGGRLPA*STSSLS
Trigger: ACTTAGAGAAGAAGTACTCCAAGCAGGTAGACGACC...GCCAGCGTCCTGCGAGCACCCAGCTGACCAAAGATGTTTCCCTCTGTAGAAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CCA 90 bp GGAAGCCATGACCATGGGAGAACATGGGATGAACTCAGCACACACACTTTACTCGGGTGCTGTTCATCTTaGACCGCACGATCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: GSHDHGRTWDELSTHTLLGCCSS*TARSSW
Trigger: CCAGGAAGATCGTGCGGTCCAAGATGAACAGCACCC...GAGTAAAGTGTGTGTGCTGAGTTCATCCCATGTTCTCCCATGGTCATGGCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp GTACATACGTGTGCGTGTGTCAGAAAAGATGGGGCAGTGTGTCCATGCATCCTCGGACAGACTCAGGCTTaGCAGTTTTGGGTCCACACA +
Preference number: 4 (lower is better)
Translates to: VHTCACVRKDGAVCPCILGQTQA*QFWVHT
Trigger: TGTGTGGACCCAAAACTGCCAAGCCTGAGTCTGTCC...GAGGATGCATGGACACACTGCCCCATCTTTTCTGACACACGCACACGTATGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR TCA 90 bp AGCACGGGACAGACTCAGGCTTGGCAGTTTTGGGTCCACACACTTTGCTTCTCATGGGAGAACATGGGATaGACTCAGCACACACACTTT +
Preference number: 4 (lower is better)
Translates to: STGQTQAWQFWVHTLCFSWENMG*TQHTHF
Trigger: AAAGTGTGTGTGCTGAGTTCATCCCATGTTCTCCCA...TGAGAAGCAAAGTGTGTGGACCCAAAACTGCCAAGCCTGAGTCTGTCCCGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR GCA 90 bp TCAGCACACACACTTTACTCAGGTTGGAAGCAGAACGAAAACCCAACACCACTGCCTTGGACACCTGGTTaGCACCCAGGTGGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: SAHTLYSGWKQNENPTPLPWTPG*HPGGCR
Trigger: TCTACAACCACCTGGGTGGCAACCAGGTGTCCAAGG...CAGTGGTGTTGGGTTTTCGTTCTGCTTCCAACCTGAGTAAAGTGTGTGTGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR GCA 90 bp CTGGAATCTGTGGGCGCTGCCTCTGTAAGCCGCAAACGTCTGAAATCTCAGGGTAATCGGTCGTCTACCTaGTTGGAGTACTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LESVGAASVSRKRLKSQGNRSST*LEYFFS
Trigger: AGAGAAGAAGTACTCCAAGCAGGTAGACGACCGATT...ACCCTGAGATTTCAGACGTTTGCGGCTTACAGAGGCAGCGCCCACAGATTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp CCCTGCAGGTGCAGGGTGGTGGCCTGTCTGAAGTTTAAAGGCTCACATAGAAAACAACATTGTCTCTCCTaGGTTTCAGGCCTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: PCRCRVVACLKFKGSHRKQHCLS*VSGLQA
Trigger: AGCCTGAAGGCCTGAAACCCAGGAGAGACAATGTTG...TTTTCTATGTGAGCCTTTAAACTTCAGACAGGCCACCACCCTGCACCTGCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491190.5
CDS-3UTR CCA 90 bp CTGCAAAGCACCTGGCCTTCTGTAAGCACTCTGGAATCTGTGGGCGCTGCCTCTCTTAATCTGAGCATATaGTACCCCAAAAGCACACAC +
Preference number: 4 (lower is better)
Translates to: LQSTWPSVSTLESVGAASLNLSI*YPKSTH
Trigger: GTGTGTGCTTTTGGGGTACCATATGCTCAGATTAAG...AGAGGCAGCGCCCACAGATTCCAGAGTGCTTACAGAAGGCCAGGTGCTTTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp TGCAGGGTGGTGGCCTGTCTGAAGTTTAAAGGCTCACATAGAAAAGCAGACCCCCCTTCAATGCCACCTTaGTTGCATGCTCAGGGCTTT +
Preference number: 4 (lower is better)
Translates to: CRVVACLKFKGSHRKADPPSMPP*LHAQGF
Trigger: AAAGCCCTGAGCATGCAACCAAGGTGGCATTGAAGG...GGGGTCTGCTTTTCTATGTGAGCCTTTAAACTTCAGACAGGCCACCACCCTGCA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000491190.5
3UTR CAA 72 bp ACATGGGATGAACTCAGCACACACACTTTACTCAGGTaGGAAGCAGAACGAAAACCCAACACCACTGGCGGG +
Preference number: 4 (lower is better)
Translates to: TWDELSTHTLLR*EAERKPNTTGG
Trigger: CCCGCCAGTGGTGTTGGGTTTTCGTTCTGCTTCCAACCTGAGTAAAGTGTGTGTGCTGAGTTCATCCCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR GCA 90 bp AATCTGAGCATATGGTACCCCAAAAGCACACACCCACTGCTCTGGTGGTACCTTACATTGGAGACAAGCTaGTTCAGCAGGAACTGGTCC +
Preference number: 4 (lower is better)
Translates to: NLSIWYPKSTHPLLWWYLTLETS*FSRNWS
Trigger: GGACCAGTTCCTGCTGAAGCAGCTTGTCTCCAATGT...AAGGTACCACCAGAGCAGTGGGTGTGTGCTTTTGGGGTACCATATGCTCAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp CCCTGCAGGTGCAGGGTGGTGGCCTGTCTGAAGTTTAAAGGCTCACATAGAAAATCATCTTGGCGATCATaGCCTTCTCTTCTTTCCGCT +
Preference number: 4 (lower is better)
Translates to: PCRCRVVACLKFKGSHRKSSWRS*PSLLSA
Trigger: AGCGGAAAGAAGAGAAGGCCATGATCGCCAAGATGA...TTTTCTATGTGAGCCTTTAAACTTCAGACAGGCCACCACCCTGCACCTGCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR TCA 90 bp TGCTTGGCGTCCTCTTGCCTCCCCCTCGTAATTAGTTCTGTTTCCCTCCTAGGGAATCCACTGAAGGCTTaGATAGAGCAAAAAGGTAGA +
Preference number: 4 (lower is better)
Translates to: CLASSCLPLVISSVSLLGNPLKA*IEQKGR
Trigger: TCTACCTTTTTGCTCTATTCAAGCCTTCAGTGGATT...CCCTAGGAGGGAAACAGAACTAATTACGAGGGGGAGGCAAGAGGACGCCAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000491190.5
CDS-3UTR GCA 90 bp TCAGCACACACACTTTACTCAGGTTGGAAGCAGAACGAAAACCCAACACCACTGAGTGGCGTCCTCGTTTaGTTGTGTGTCTCTTACACG +
Preference number: 4 (lower is better)
Translates to: SAHTLYSGWKQNENPTPLSGVLV*LCVSYT
Trigger: CGTGTAAGAGACACACAAGCAAACGAGGACGCCACT...CAGTGGTGTTGGGTTTTCGTTCTGCTTCCAACCTGAGTAAAGTGTGTGTGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp CACACACATTCCCACGGCTCCTTTCCACCTGTGCAGCAGCACCTGTTAGAAAACTTGATGTACTTCATCTaGTCCATCAGCTTCATGGCA +
Preference number: 4 (lower is better)
Translates to: HTHSHGSFPPVQQHLLENLMYFI*SISFMA
Trigger: TGCCATGAAGCTGATGGACCAGATGAAGTACATCAA...GTTTTCTAACAGGTGCTGCTGCACAGGTGGAAAGGAGCCGTGGGAATGTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR TCA 90 bp CCCTGCAGGTGCAGGGTGGTGGCCTGTCTGAAGTTTAAAGGCTCACATAGAAAATCCTCCTACTTAATCTaGGCATATGGTACCCCAAAA +
Preference number: 4 (lower is better)
Translates to: PCRCRVVACLKFKGSHRKSSYLI*AYGTPK
Trigger: TTTTGGGGTACCATATGCTCAGATTAAGTAGGAGGA...TTTTCTATGTGAGCCTTTAAACTTCAGACAGGCCACCACCCTGCACCTGCAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR GCA 90 bp ATCCTCCTACTTAATCTGAGCATATGGTACCCCAAAAGCACACACCCACTGCTCATTCCATCTGCGTTTTaGTTAGGGGAAGGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: ILLLNLSIWYPKSTHPLLIPSAF*LGEGGC
Trigger: ACACCCTCCTTCCCCTAAGCAAAACGCAGATGGAAT...GAGCAGTGGGTGTGTGCTTTTGGGGTACCATATGCTCAGATTAAGTAGGAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR GCA 90 bp GATTGCTTCCCTTGGTTCCAGCTCGGCCTGGGATGGGAAAGCAGCTTTTTGTTTCTTGGTATGTTTAACTaGCCCCTCCCACTAAAACAA +
Preference number: 4 (lower is better)
Translates to: DCFPWFQLGLGWESSFLFLGMFN*PLPLKQ
Trigger: TTGTTTTAGTGGGAGGGGGCAGTTAAACATACCAAG...AAACAAAAAGCTGCTTTCCCATCCCAGGCCGAGCTGGAACCAAGGGAAGCAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp CCCTGCAGGTGCAGGGTGGTGGCCTGTCTGAAGTTTAAAGGCTCACATAGAAAAACACTTTACTCAGGTTaGAAGCAGAACGAAAACCCA +
Preference number: 4 (lower is better)
Translates to: PCRCRVVACLKFKGSHRKTLYSG*KQNENP
Trigger: TGGGTTTTCGTTCTGCTTCCAACCTGAGTAAAGTGT...TTTTCTATGTGAGCCTTTAAACTTCAGACAGGCCACCACCCTGCACCTGCAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp TCAGCACACACACTTTACTCAGGTTGGAAGCAGAACGAAAACCCAACACCACTGGAGAGGTGGTACAGGTaGACATCAAAGTCACATTGT +
Preference number: 4 (lower is better)
Translates to: SAHTLYSGWKQNENPTPLERWYR*TSKSHC
Trigger: ACAATGTGACTTTGATGTCCACCTGTACCACCTCTC...CAGTGGTGTTGGGTTTTCGTTCTGCTTCCAACCTGAGTAAAGTGTGTGTGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CCA 90 bp ATCCTCCTACTTAATCTGAGCATATGGTACCCCAAAAGCACACACCCACTGCTCTTGATGTACTTCATCTaGTCCATCAGCTTCATGGCA +
Preference number: 4 (lower is better)
Translates to: ILLLNLSIWYPKSTHPLLLMYFI*SISFMA
Trigger: TGCCATGAAGCTGATGGACCAGATGAAGTACATCAA...GAGCAGTGGGTGTGTGCTTTTGGGGTACCATATGCTCAGATTAAGTAGGAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS GCA 90 bp CGCCCTCGACGGCGCCGGCCTCCAGCTCGTCGGCCGCGCGCCCCTTaGCCCGCCGCTCCTCCAGACCCACCTCCACCGAGCGAGGGCGCA +
Preference number: 5 (lower is better)
Translates to: RPRRRRPPARRPRAP*PAAPPDPPPPSEGA
Trigger: TGCGCCCTCGCTCGGTGGAGGTGGGTCTGGAGGAGCGGCGGGGCAAGGGGCGCGCGGCCGACGAGCTGGAGGCCGGCGCCGTCGAGGGCG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS GCA 90 bp CGCTGCCGGCGGCTGCCGCGACCGCAGTCGTCGCCGCCGCGCTCCTaGCAGGCGGACTTGGAGCGGAAGCTGAAGCCGAAGCCCCCGGCC +
Preference number: 5 (lower is better)
Translates to: RCRRLPRPQSSPPRS*QADLERKLKPKPPA
Trigger: GGCCGGGGGCTTCGGCTTCAGCTTCCGCTCCAAGTCCGCCTGGCAGGAGCGCGGCGGCGACGACTGCGGTCGCGGCAGCCGCCGGCAGCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS CCA 90 bp GTCGAGCTCGACGAGGGCCGGAGTTGCGGACGAGACGGGACGGAGTaGTGTCCTTGCGGGCGGTGCCTCCTCGGGCCGGCAGTGCCCGGG +
Preference number: 5 (lower is better)
Translates to: VELDEGRSCGRDGTE*CPCGRCLLGPAVPG
Trigger: CCCGGGCACTGCCGGCCCGAGGAGGCACCGCCCGCAAGGACACCACTCCGTCCCGTCTCGTCCGCAACTCCGGCCCTCGTCGAGCTCGAC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS TCA 90 bp AGTCGTCGCCGCCGCGCTCCTGCCAGGCGGACTTGGAGCGGAAGCTaGAGCCGAAGCCCCCGGCCAGGGGGTCGTCACCGCTCAGCGGAG +
Preference number: 5 (lower is better)
Translates to: SRRRRAPARRTWSGS*SRSPRPGGRHRSAE
Trigger: CTCCGCTGAGCGGTGACGACCCCCTGGCCGGGGGCTTCGGCTTCAGCTTCCGCTCCAAGTCCGCCTGGCAGGAGCGCGGCGGCGACGACT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS CCA 90 bp GGTCTGGCTGCTGCTGCGCCGCACGCGGAGAGACGTCCGGGATCCTaGCTCGCGTCGAGCTCGACGAGGGCCGGAGTTGCGGACGAGACG +
Preference number: 5 (lower is better)
Translates to: GLAAAAPHAERRPGS*LASSSTRAGVADET
Trigger: CGTCTCGTCCGCAACTCCGGCCCTCGTCGAGCTCGACGCGAGCCAGGATCCCGGACGTCTCTCCGCGTGCGGCGCAGCAGCAGCCAGACC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS GCA 90 bp ACGTCCGGGATCCTGGCTCGCGTCGAGCTCGACGAGGGCCGGAGTTaGGGACGAGACGGGACGGAGTGGTGTCCTTGCGGGCGGTGCCTC +
Preference number: 5 (lower is better)
Translates to: TSGILARVELDEGRS*GRDGTEWCPCGRCL
Trigger: GAGGCACCGCCCGCAAGGACACCACTCCGTCCCGTCTCGTCCGCAACTCCGGCCCTCGTCGAGCTCGACGCGAGCCAGGATCCCGGACGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS CCA 90 bp AGCAGGAACTGGTCCTGGGCGTTGGTGCGCAGGGCGATGGCCAGGTaGAGGGCGGACAGGAGCACCCCGCTGAGCACTGCGGCCCGCATG +
Preference number: 5 (lower is better)
Translates to: SRNWSWALVRRAMAR*RADRSTPLSTAARM
Trigger: CATGCGGGCCGCAGTGCTCAGCGGGGTGCTCCTGTCCGCCCTCCACCTGGCCATCGCCCTGCGCACCAACGCCCAGGACCAGTTCCTGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CAA 90 bp CAGCCCTGCGGGCTGGAGCATGGCTTCCCCGCCACCCCCGGCACACAGAGAAGCGGGCGTGGTCAGCCCTaGCTTCAGGCAGCCCCGAGA +
Preference number: 5 (lower is better)
Translates to: QPCGLEHGFPATPGTQRSGRGQP*LQAAPR
Trigger: TCTCGGGGCTGCCTGAAGCAAGGGCTGACCACGCCC...GCTTCTCTGTGTGCCGGGGGTGGCGGGGAAGCCATGCTCCAGCCCGCAGGGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS GCA 90 bp ATGGAGTTGCCTCCGAGGTGGGGTCGCAGGGACTGGTCTGGCTGCTaGTGCGCCGCACGCGGAGAGACGTCCGGGATCCTGGCTCGCGTC +
Preference number: 5 (lower is better)
Translates to: MELPPRWGRRDWSGC*CAARGETSGILARV
Trigger: GACGCGAGCCAGGATCCCGGACGTCTCTCCGCGTGCGGCGCAGCAGCAGCCAGACCAGTCCCTGCGACCCCACCTCGGAGGCAACTCCAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS GCA 90 bp GAAATGGAGTTGCCTCCGAGGTGGGGTCGCAGGGACTGGTCTGGCTaGTGCTGCGCCGCACGCGGAGAGACGTCCGGGATCCTGGCTCGC +
Preference number: 5 (lower is better)
Translates to: EMELPPRWGRRDWSG*CCAARGETSGILAR
Trigger: GCGAGCCAGGATCCCGGACGTCTCTCCGCGTGCGGCGCAGCAGCAGCCAGACCAGTCCCTGCGACCCCACCTCGGAGGCAACTCCATTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS GCA 90 bp ATGAAGAACACGGTCCACCAGATGCCCTCAGAGGCGCTGCGTGGCTaGGGCAGCAGCAGGCCCACCACCTGGACGGCCAGCACCACGGCG +
Preference number: 5 (lower is better)
Translates to: MKNTVHQMPSEALRG*GSSRPTTWTASTTA
Trigger: CGCCGTGGTGCTGGCCGTCCAGGTGGTGGGCCTGCTGCTGCCGCAGCCACGCAGCGCCTCTGAGGGCATCTGGTGGACCGTGTTCTTCAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CAA 90 bp CCAGGCCACATTCGAGCCCGTCTACCCCCAGCTGAGTCGGAGGCCCCTCAGCCCTGGATGCGTCCTGCCTaGCCGCCAGCCTCCATGTGG +
Preference number: 5 (lower is better)
Translates to: PGHIRARLPPAESEAPQPWMRPA*PPASMW
Trigger: CCACATGGAGGCTGGCGGCAAGGCAGGACGCATCCA...GGGCTGAGGGGCCTCCGACTCAGCTGGGGGTAGACGGGCTCGAATGTGGCCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CAA 90 bp CAGCCCTGCGGGCTGGAGCATGGCTTCCCCGCCACCCCCGGCACACAGAGAAGCTGGCTCGCGCTGATGTaGTGCTCCTGTGCCAAGCAG +
Preference number: 5 (lower is better)
Translates to: QPCGLEHGFPATPGTQRSWLALM*CSCAKQ
Trigger: CTGCTTGGCACAGGAGCACAACATCAGCGCGAGCCA...GCTTCTCTGTGTGCCGGGGGTGGCGGGGAAGCCATGCTCCAGCCCGCAGGGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CAA 90 bp GCAGCGCAGCCCTGCGGGCTGGAGCATGGCTTCCCCGCCACCCCCGGCACACAGCACTGGGAGGTCCCGTaGTTGAAGAAGTCTATGGCG +
Preference number: 5 (lower is better)
Translates to: AAQPCGLEHGFPATPGTQHWEVP*LKKSMA
Trigger: CGCCATAGACTTCTTCAACAACGGGACCTCCCAGTG...CTGTGTGCCGGGGGTGGCGGGGAAGCCATGCTCCAGCCCGCAGGGCTGCGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CAA 90 bp GGCACCCCGGGGCCTGGGACAGAGGCCGCTGCCCACCAGCAAAGGCAGAAGCTGTCCAGCTGGTACGTGTaGGCAGCCAGCACCTGGTAC +
Preference number: 5 (lower is better)
Translates to: GTPGPGTEAAAHQQRQKLSSWYV*AASTWY
Trigger: GTACCAGGTGCTGGCTGCCAACACGTACCAGCTGGA...CAGCTTCTGCCTTTGCTGGTGGGCAGCGGCCTCTGTCCCAGGCCCCGGGGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CAA 90 bp CCAGGCCACATTCGAGCCCGTCTACCCCCAGCTGAGTCGGAGGCCCCTCAGCCCACCAGCAGGTCGGCGTaGTCGAAGAGCGTGACACCT +
Preference number: 5 (lower is better)
Translates to: PGHIRARLPPAESEAPQPTSRSA*SKSVTP
Trigger: AGGTGTCACGCTCTTCGACAACGCCGACCTGCTGGT...GGGCTGAGGGGCCTCCGACTCAGCTGGGGGTAGACGGGCTCGAATGTGGCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CAA 90 bp GCAGCGCAGCCCTGCGGGCTGGAGCATGGCTTCCCCGCCACCCCCGGCACACAGTGTCGCAGGATGAGATaGCTTCCCTTGGTTCCAGCT +
Preference number: 5 (lower is better)
Translates to: AAQPCGLEHGFPATPGTQCRRMR*LPLVPA
Trigger: AGCTGGAACCAAGGGAAGCAATCTCATCCTGCGACA...CTGTGTGCCGGGGGTGGCGGGGAAGCCATGCTCCAGCCCGCAGGGCTGCGCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CAA 90 bp GGCACCCCGGGGCCTGGGACAGAGGCCGCTGCCCACCAGCAAAGGCAGAAGCTGCACTGGGAGGTCCCGTaGTTGAAGAAGTCTATGGCG +
Preference number: 5 (lower is better)
Translates to: GTPGPGTEAAAHQQRQKLHWEVP*LKKSMA
Trigger: CGCCATAGACTTCTTCAACAACGGGACCTCCCAGTG...CAGCTTCTGCCTTTGCTGGTGGGCAGCGGCCTCTGTCCCAGGCCCCGGGGTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CAA 90 bp GCTGAGTCGGAGGCCCCTCAGCCCTGCCCTTGTCTGGGCCGTGCCACACACACACATCTTCCCCTGCCCTaGGAAAGCGGGCTCCTGGTT +
Preference number: 5 (lower is better)
Translates to: AESEAPQPCPCLGRATHTHLPLP*ESGLLV
Trigger: AACCAGGAGCCCGCTTTCCAAGGGCAGGGGAAGATG...TGTGTGTGTGGCACGGCCCAGACAAGGGCAGGGCTGAGGGGCCTCCGACTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491190.5
CDS-3UTR CAA 90 bp CACCACTGGCGGGCGATGTGGAGGGGCAGGGAACTTGAGAACAACAGCTGGAAGCGACGAGGGCCGGAGTaGCGGACGAGACGGGACGGA +
Preference number: 5 (lower is better)
Translates to: HHWRAMWRGRELENNSWKRRGPE*RTRRDG
Trigger: TCCGTCCCGTCTCGTCCGCAACTCCGGCCCTCGTCG...CTTCCAGCTGTTGTTCTCAAGTTCCCTGCCCCTCCACATCGCCCGCCAGTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CAA 90 bp TTGGTGTGCGGGGAGGGGAGGGTGGTGCTAGAGCCCAGTGAGAGGTGGTACAGGGTAGGCCAGGGAGGCTaGGCTTCCTCGTCCCAGCCT +
Preference number: 5 (lower is better)
Translates to: LVCGEGRVVLEPSERWYRVGQGG*ASSSQP
Trigger: AGGCTGGGACGAGGAAGCCAAGCCTCCCTGGCCTAC...CCTGTACCACCTCTCACTGGGCTCTAGCACCACCCTCCCCTCCCCGCACACCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS CCA 90 bp GGAGACAAGCTTCTCACTGCTCCATCCAGACCTCCCACTCCACCATaGTCAGGGGCCAGGAGGTGGGCAGTCGGCCCATGTCCCCTGCCT +
Preference number: 5 (lower is better)
Translates to: GDKLLTAPSRPPTPP*SGARRWAVGPCPLP
Trigger: AGGCAGGGGACATGGGCCGACTGCCCACCTCCTGGCCCCTGACCATGGTGGAGTGGGAGGTCTGGATGGAGCAGTGAGAAGCTTGTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466617.5
CDS CCA 90 bp GAACATTGGAGACAAGCTGCTTCAGCAGGAACTGGTCCTGGGCGTTaGTGCGCAGGGCGATGGCCAGGTGGAGGGCGGACAGGAGCACCC +
Preference number: 5 (lower is better)
Translates to: EHWRQAASAGTGPGR*CAGRWPGGGRTGAP
Trigger: GGGTGCTCCTGTCCGCCCTCCACCTGGCCATCGCCCTGCGCACCAACGCCCAGGACCAGTTCCTGCTGAAGCAGCTTGTCTCCAATGTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS CCA 90 bp CCCCACATGCTGCAGGTCCTTCTGACTCCCAACCTGAGACACCCGTaGGCTTCCAGGCCCAAGGCTGTGCTAAACCCTGCAGCCTCCCGC +
Preference number: 5 (lower is better)
Translates to: PHMLQVLLTPNLRHP*ASRPKAVLNPAASR
Trigger: GCGGGAGGCTGCAGGGTTTAGCACAGCCTTGGGCCTGGAAGCCCACGGGTGTCTCAGGTTGGGAGTCAGAAGGACCTGCAGCATGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478092.1
CDS-3UTR CAA 90 bp GCAGCGCAGCCCTGCGGGCTGGAGCATGGCTTCCCCGCCACCCCCGGCACACAGATCATATCCTCCTGCTaGGCGTTGATGTCTGCTTTC +
Preference number: 5 (lower is better)
Translates to: AAQPCGLEHGFPATPGTQIISSC*ALMSAF
Trigger: GAAAGCAGACATCAACGCCAAGCAGGAGGATATGAT...CTGTGTGCCGGGGGTGGCGGGGAAGCCATGCTCCAGCCCGCAGGGCTGCGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CAA 90 bp CCAAAGCCAGCACTCCTGTGCCAAAGCCCCTGCAGGTGCAGGGTGGTGGCCTGTCCCCAGTGTGGTGGGTaGTGCCCGATGGAGTTGGTT +
Preference number: 5 (lower is better)
Translates to: PKPALLCQSPCRCRVVACPQCGG*CPMELV
Trigger: AACCAACTCCATCGGGCACAACCCACCACACTGGGG...ACAGGCCACCACCCTGCACCTGCAGGGGCTTTGGCACAGGAGTGCTGGCTTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CAA 90 bp TCCAAAGCCAGCACTCCTGTGCCAAAGCCCCTGCAGGTGCAGGGTGGTGGCCTGAAGTCGGCCAGTGCCTaGATGTGGGTCTTGCCCACC +
Preference number: 5 (lower is better)
Translates to: SKASTPVPKPLQVQGGGLKSASA*MWVLPT
Trigger: GGTGGGCAAGACCCACATCAAGGCACTGGCCGACTT...CAGGCCACCACCCTGCACCTGCAGGGGCTTTGGCACAGGAGTGCTGGCTTTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CAA 90 bp CATGGCTTCCCCGCCACCCCCGGCACACAGAGAAGCTGCTTCCATGCCTCTGGATCCAGCTGGTACGTGTaGGCAGCCAGCACCTGGTAC +
Preference number: 5 (lower is better)
Translates to: HGFPATPGTQRSCFHASGSSWYV*AASTWY
Trigger: GTACCAGGTGCTGGCTGCCAACACGTACCAGCTGGA...TCCAGAGGCATGGAAGCAGCTTCTCTGTGTGCCGGGGGTGGCGGGGAAGCCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CAA 90 bp GGCACCCCGGGGCCTGGGACAGAGGCCGCTGCCCACCAGCAAAGGCAGAAGCTGCTGGGACTTACAACATaGTCTCTCCTGGGTTTCAGG +
Preference number: 5 (lower is better)
Translates to: GTPGPGTEAAAHQQRQKLLGLTT*SLLGFR
Trigger: CCTGAAACCCAGGAGAGACAATGTTGTAAGTCCCAG...CAGCTTCTGCCTTTGCTGGTGGGCAGCGGCCTCTGTCCCAGGCCCCGGGGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491190.5
CDS-3UTR CAA 90 bp CCGCAAACGTCTGAAATCTCAGGGTGTGGAGGGCACCACACTGCCTGTCGCAGGTCCTGCCAGGCGGACTaGGAGCGGAAGCTGAAGCCG +
Preference number: 5 (lower is better)
Translates to: PQTSEISGCGGHHTACRRSCQAD*ERKLKP
Trigger: CGGCTTCAGCTTCCGCTCCAAGTCCGCCTGGCAGGA...CCTGCGACAGGCAGTGTGGTGCCCTCCACACCCTGAGATTTCAGACGTTTGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CAA 90 bp CCAGGCCACATTCGAGCCCGTCTACCCCCAGCTGAGTCGGAGGCCCCTCAGCCCACCTTCAATGCCACCTaGGTTGCATGCTCAGGGCTT +
Preference number: 5 (lower is better)
Translates to: PGHIRARLPPAESEAPQPTFNAT*VACSGL
Trigger: AAGCCCTGAGCATGCAACCAAGGTGGCATTGAAGGT...GGGCTGAGGGGCCTCCGACTCAGCTGGGGGTAGACGGGCTCGAATGTGGCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491190.5
CDS TCA 90 bp GTCCTGAGCGGAGGAGGAGGGCACAGCCCCGAGGTGAGAAGTAGCTaGGGATCCGCGTCAGAAGTCCCAGGTCCGAAATGGAGTTGCCTC +
Preference number: 5 (lower is better)
Translates to: VLSGGGGHSPEVRSS*GSASEVPGPKWSCL
Trigger: GAGGCAACTCCATTTCGGACCTGGGACTTCTGACGCGGATCCTCAGCTACTTCTCACCTCGGGGCTGTGCCCTCCTCCTCCGCTCAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CAA 90 bp CTGGAGCATGGCTTCCCCGCCACCCCCGGCACACAGAGAAGCTGCTTCCATGCCTTGTGCCCGATGGAGTaGGTTCTCTGGCGGTTCATC +
Preference number: 5 (lower is better)
Translates to: LEHGFPATPGTQRSCFHALCPME*VLWRFI
Trigger: GATGAACCGCCAGAGAACCAACTCCATCGGGCACAA...GGCATGGAAGCAGCTTCTCTGTGTGCCGGGGGTGGCGGGGAAGCCATGCTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CAA 90 bp CCAAAGCCAGCACTCCTGTGCCAAAGCCCCTGCAGGTGCAGGGTGGTGGCCTGTATCCGCTTCATCTCCTaGGACACCTGGTTGCCACCC +
Preference number: 5 (lower is better)
Translates to: PKPALLCQSPCRCRVVACIRFIS*DTWLPP
Trigger: GGGTGGCAACCAGGTGTCCAAGGAGATGAAGCGGAT...ACAGGCCACCACCCTGCACCTGCAGGGGCTTTGGCACAGGAGTGCTGGCTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CAA 90 bp CACATTCGAGCCCGTCTACCCCCAGCTGAGTCGGAGGCCCCTCAGCCCTGCCCTGGCGTCCTCGTTTGCTaGTGTGTCTCTTACACGCAT +
Preference number: 5 (lower is better)
Translates to: HIRARLPPAESEAPQPCPGVLVC*CVSYTH
Trigger: ATGCGTGTAAGAGACACACAAGCAAACGAGGACGCC...AGGGCAGGGCTGAGGGGCCTCCGACTCAGCTGGGGGTAGACGGGCTCGAATGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CAA 90 bp CCAGGCCACATTCGAGCCCGTCTACCCCCAGCTGAGTCGGAGGCCCCTCAGCCCTCAATGCCACCTTGGTaGCATGCTCAGGGCTTTGTT +
Preference number: 5 (lower is better)
Translates to: PGHIRARLPPAESEAPQPSMPPW*HAQGFV
Trigger: AACAAAGCCCTGAGCATGCAACCAAGGTGGCATTGA...GGGCTGAGGGGCCTCCGACTCAGCTGGGGGTAGACGGGCTCGAATGTGGCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491190.5
CDS GCA 90 bp CCTGAGACACCCGTGGGCTTCCAGGCCCAAGGCTGTGCTAAACCCTaGAGCCTCCCGCTACCCTGCTCCTGTCAAATGCCTGTGAATGCA +
Preference number: 5 (lower is better)
Translates to: PETPVGFQAQGCAKP*SLPLPCSCQMPVNA
Trigger: TGCATTCACAGGCATTTGACAGGAGCAGGGTAGCGGGAGGCTGCAGGGTTTAGCACAGCCTTGGGCCTGGAAGCCCACGGGTGTCTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478092.1
CDS CCA 90 bp GTTGGCGGTGACCAGCAGGTCGGCGTTGTCGAAGAGCGTGACACCTaGCACCTCCACGATGAGCACGTAGATGAGCTCGATGGCCAGCAT +
Preference number: 5 (lower is better)
Translates to: VGGDQQVGVVEERDT*HLHDEHVDELDGQH
Trigger: ATGCTGGCCATCGAGCTCATCTACGTGCTCATCGTGGAGGTGCCAGGTGTCACGCTCTTCGACAACGCCGACCTGCTGGTCACCGCCAAC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309879.9
ENST00000462833.6
ENST00000474577.5
ENST00000491190.5
CDS-3UTR CAA 90 bp CACCACTGGCGGGCGATGTGGAGGGGCAGGGAACTTGAGAACAACAGCTGGAAGCCCCAGTGTGGTGGGTaGTGCCCGATGGAGTTGGTT +
Preference number: 5 (lower is better)
Translates to: HHWRAMWRGRELENNSWKPQCGG*CPMELV
Trigger: AACCAACTCCATCGGGCACAACCCACCACACTGGGG...CTTCCAGCTGTTGTTCTCAAGTTCCCTGCCCCTCCACATCGCCCGCCAGTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CAA 90 bp GCCACAGTCCCTCCAAAGCCAGCACTCCTGTGCCAAAGCCCCTGCAGGTGCAGGTGGGCGTTCTTGTCCTaGGGGTCTTCAAAGCCCATC +
Preference number: 5 (lower is better)
Translates to: ATVPPKPALLCQSPCRCRWAFLS*GSSKPI
Trigger: GATGGGCTTTGAAGACCCCAAGGACAAGAACGCCCA...CCTGCACCTGCAGGGGCTTTGGCACAGGAGTGCTGGCTTTGGAGGGACTGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CAA 90 bp GAAGCTGCTCTGGAGTCCAAGTGGAAAATCTCAGCAGCGCAGCCCTGCGGGCTGACCAGCAGGTCGGCGTaGTCGAAGAGCGTGACACCT +
Preference number: 5 (lower is better)
Translates to: EAALESKWKISAAQPCGLTSRSA*SKSVTP
Trigger: AGGTGTCACGCTCTTCGACAACGCCGACCTGCTGGT...CAGCCCGCAGGGCTGCGCTGCTGAGATTTTCCACTTGGACTCCAGAGCAGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CAA 90 bp CAGAGGACCACGATGAAGGCCACAGTCCCTCCAAAGCCAGCACTCCTGTGCCAAAGGTCCGAAATGGAGTaGCCTCCGAGGTGGGGTCGC +
Preference number: 5 (lower is better)
Translates to: QRTTMKATVPPKPALLCQRSEME*PPRWGR
Trigger: GCGACCCCACCTCGGAGGCAACTCCATTTCGGACCT...TTGGCACAGGAGTGCTGGCTTTGGAGGGACTGTGGCCTTCATCGTGGTCCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CAA 90 bp CACATTCGAGCCCGTCTACCCCCAGCTGAGTCGGAGGCCCCTCAGCCCTGCCCTTCAGGCTTGGCAGTTTaGGGTCCACACACTTTGCTT +
Preference number: 5 (lower is better)
Translates to: HIRARLPPAESEAPQPCPSGLAV*GPHTLL
Trigger: AAGCAAAGTGTGTGGACCCAAAACTGCCAAGCCTGA...AGGGCAGGGCTGAGGGGCCTCCGACTCAGCTGGGGGTAGACGGGCTCGAATGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS GCA 90 bp CACGTGACACGCGTTGACCTGGCTCGCGCTGATGTTGTGCTCCTGTaGCAAGCAGCCCAGCAGGTCCCTGGAGTTGCACGTGAACATGTT +
Preference number: 5 (lower is better)
Translates to: HVTRVDLARADVVLL*QAAQQVPGVAREHV
Trigger: AACATGTTCACGTGCAACTCCAGGGACCTGCTGGGCTGCTTGGCACAGGAGCACAACATCAGCGCGAGCCAGGTCAACGCGTGTCACGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309879.9
ENST00000462833.6
ENST00000466617.5
ENST00000468683.1
ENST00000474577.5
ENST00000491190.5
CDS GCA 90 bp ACCCTGCAGCCTCCCGCTACCCTGCTCCTGTCAAATGCCTGTGAATaGAAGACACAAGGAGCCTGCACCTGTGTCCTCGACACCCCTCAC +
Preference number: 5 (lower is better)
Translates to: TLQPPATLLLSNACE*KTQGACTCVLDTPH
Trigger: GTGAGGGGTGTCGAGGACACAGGTGCAGGCTCCTTGTGTCTTGCATTCACAGGCATTTGACAGGAGCAGGGTAGCGGGAGGCTGCAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478092.1
CDS CCA 90 bp CTGAGGGCAGGGAGCGACCCTATCCGAGGAGCATCAACTCACCACTaGGAGGTCCCGTTGTTGAAGAAGTCTATGGCGTTGGCGGTGACC +
Preference number: 5 (lower is better)
Translates to: LRAGSDPIRGASTHH*EVPLLKKSMALAVT
Trigger: GGTCACCGCCAACGCCATAGACTTCTTCAACAACGGGACCTCCCAGTGGTGAGTTGATGCTCCTCGGATAGGGTCGCTCCCTGCCCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474577.5
CDS-3UTR CAA 90 bp CAGAGGACCACGATGAAGGCCACAGTCCCTCCAAAGCCAGCACTCCTGTGCCAAAAGTACTCGGGGAAGTaGCAGTTGGGCCAGGGGCTG +
Preference number: 5 (lower is better)
Translates to: QRTTMKATVPPKPALLCQKYSGK*QLGQGL
Trigger: CAGCCCCTGGCCCAACTGCAACTTCCCCGAGTACTT...TTGGCACAGGAGTGCTGGCTTTGGAGGGACTGTGGCCTTCATCGTGGTCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CAA 90 bp ACGATGAAGGCCACAGTCCCTCCAAAGCCAGCACTCCTGTGCCAAAGCCCCTGCAAGAAGTCTATGGCGTaGGCGGTGACCAGCAGGTCG +
Preference number: 5 (lower is better)
Translates to: TMKATVPPKPALLCQSPCKKSMA*AVTSRS
Trigger: CGACCTGCTGGTCACCGCCAACGCCATAGACTTCTT...GCAGGGGCTTTGGCACAGGAGTGCTGGCTTTGGAGGGACTGTGGCCTTCATCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CAA 90 bp TCCAAAGCCAGCACTCCTGTGCCAAAGCCCCTGCAGGTGCAGGGTGGTGGCCTGTGGGAGGTCCCGTTGTaGAAGAAGTCTATGGCGTTG +
Preference number: 5 (lower is better)
Translates to: SKASTPVPKPLQVQGGGLWEVPL*KKSMAL
Trigger: CAACGCCATAGACTTCTTCAACAACGGGACCTCCCA...CAGGCCACCACCCTGCACCTGCAGGGGCTTTGGCACAGGAGTGCTGGCTTTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CAA 90 bp CACCACTGGCGGGCGATGTGGAGGGGCAGGGAACTTGAGAACAACAGCTGGAAGTCAATGCCACCTTGGTaGCATGCTCAGGGCACTGGG +
Preference number: 5 (lower is better)
Translates to: HHWRAMWRGRELENNSWKSMPPW*HAQGTG
Trigger: CCCAGTGCCCTGAGCATGCAACCAAGGTGGCATTGA...CTTCCAGCTGTTGTTCTCAAGTTCCCTGCCCCTCCACATCGCCCGCCAGTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CAA 90 bp TTGGTGTGCGGGGAGGGGAGGGTGGTGCTAGAGCCCAGTGAGAGGTGGTACAGGGAGTGGCGTCCTCGTTaGCTTGTGTGTCTCTTACAC +
Preference number: 5 (lower is better)
Translates to: LVCGEGRVVLEPSERWYREWRPR*LVCLLH
Trigger: GTGTAAGAGACACACAAGCAAACGAGGACGCCACTC...CCTGTACCACCTCTCACTGGGCTCTAGCACCACCCTCCCCTCCCCGCACACCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS TCA 90 bp CTAAACCCTGCAGCCTCCCGCTACCCTGCTCCTGTCAAATGCCTGTaGATGCAAGACACAAGGAGCCTGCACCTGTGTCCTCGACACCCC +
Preference number: 5 (lower is better)
Translates to: LNPAASRYPAPVKCL*MQDTRSLHLCPRHP
Trigger: GGGGTGTCGAGGACACAGGTGCAGGCTCCTTGTGTCTTGCATTCACAGGCATTTGACAGGAGCAGGGTAGCGGGAGGCTGCAGGGTTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478092.1
CDS CCA 90 bp GAACATTGGAGACAAGCTTACCTCCAACTGAGTGCGGAACCTAGATaGGGCCATGTCTTCCGTGGGACAGGCCTGGGCCCTACCCAGCAC +
Preference number: 5 (lower is better)
Translates to: EHWRQAYLQLSAEPR*GHVFRGTGLGPTQH
Trigger: GTGCTGGGTAGGGCCCAGGCCTGTCCCACGGAAGACATGGCCCCATCTAGGTTCCGCACTCAGTTGGAGGTAAGCTTGTCTCCAATGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476455.1
CDS-3UTR CAA 90 bp GTGTGGGCAGAGGACCACGATGAAGGCCACAGTCCCTCCAAAGCCAGCACTCCTAGGGTGCTGTTCATCTaGGACCGCACGATCTTCCTG +
Preference number: 5 (lower is better)
Translates to: VWAEDHDEGHSPSKASTPRVLFI*DRTIFL
Trigger: CAGGAAGATCGTGCGGTCCAAGATGAACAGCACCCT...AGGAGTGCTGGCTTTGGAGGGACTGTGGCCTTCATCGTGGTCCTCTGCCCACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CAA 90 bp GTCTTCTACAGAGGGAAACATCTTTGGTCAGCTGGGTGCTCGCAGGACGCTGGCACCACGGGGCCGATGTaGAGCCCGATCTTCATCTGG +
Preference number: 5 (lower is better)
Translates to: VFYRGKHLWSAGCSQDAGTTGPM*SPIFIW
Trigger: CCAGATGAAGATCGGGCTCAACATCGGCCCCGTGGT...GCCAGCGTCCTGCGAGCACCCAGCTGACCAAAGATGTTTCCCTCTGTAGAAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CAA 90 bp CTTCTACAGAGGGAAACATCTTTGGTCAGCTGGGTGCTCGCAGGACGCTGGCACACCACGGGGCCGATGTaGAGCCCGATCTTCATCTGG +
Preference number: 5 (lower is better)
Translates to: LLQRETSLVSWVLAGRWHTTGPM*SPIFIW
Trigger: CCAGATGAAGATCGGGCTCAACATCGGCCCCGTGGT...GTGCCAGCGTCCTGCGAGCACCCAGCTGACCAAAGATGTTTCCCTCTGTAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CAA 90 bp GAAGCTGCTCTGGAGTCCAAGTGGAAAATCTCAGCAGCGCAGCCCTGCGGGCTGTACAGCCGCTCCAGTTaGTCCGACGGGAACTTCTTG +
Preference number: 5 (lower is better)
Translates to: EAALESKWKISAAQPCGLYSRSS*SDGNFL
Trigger: CAAGAAGTTCCCGTCGGACAAACTGGAGCGGCTGTA...CAGCCCGCAGGGCTGCGCTGCTGAGATTTTCCACTTGGACTCCAGAGCAGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CAA 90 bp GTCTTCTACAGAGGGAAACATCTTTGGTCAGCTGGGTGCTCGCAGGACGCTGGCTGGAAGGCGGCGCGGTaGCAAAGCACAGCCATGATG +
Preference number: 5 (lower is better)
Translates to: VFYRGKHLWSAGCSQDAGWKAAR*QSTAMM
Trigger: CATCATGGCTGTGCTTTGCAACCGCGCCGCCTTCCA...GCCAGCGTCCTGCGAGCACCCAGCTGACCAAAGATGTTTCCCTCTGTAGAAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS GCA 90 bp TTCCAGGCCCAAGGCTGTGCTAAACCCTGCAGCCTCCCGCTACCCTaGTCCTGTCAAATGCCTGTGAATGCAAGACACAAGGAGCCTGCA +
Preference number: 5 (lower is better)
Translates to: FQAQGCAKPCSLPLP*SCQMPVNARHKEPA
Trigger: TGCAGGCTCCTTGTGTCTTGCATTCACAGGCATTTGACAGGAGCAGGGTAGCGGGAGGCTGCAGGGTTTAGCACAGCCTTGGGCCTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478092.1
CDS CCA 90 bp GTGGTGGGTTGTGCCCGATGGAGTTGGTTCTCTGGCGGTTCATCTTaGCGATCATGGCCTTCTCTTCTTTCCGCTTCTGGGTGCAGCGCA +
Preference number: 5 (lower is better)
Translates to: VVGCARWSWFSGGSS*RSWPSLLSASGCSA
Trigger: TGCGCTGCACCCAGAAGCGGAAAGAAGAGAAGGCCATGATCGCCAAGATGAACCGCCAGAGAACCAACTCCATCGGGCACAACCCACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309879.9
ENST00000462833.6
ENST00000466617.5
ENST00000491190.5
CDS-3UTR CAA 90 bp GTACATACGTGTGCGTGTGTCAGAAAAGATGGGGCAGTGTGTCCATGCATCCTCTGGATGCGTCCTGCCTaGCCGCCAGCCTCCATGTGG +
Preference number: 5 (lower is better)
Translates to: VHTCACVRKDGAVCPCILWMRPA*PPASMW
Trigger: CCACATGGAGGCTGGCGGCAAGGCAGGACGCATCCA...GAGGATGCATGGACACACTGCCCCATCTTTTCTGACACACGCACACGTATGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CAA 90 bp TGTGCGTGGAGGTGTGGGCAGAGGACCACGATGAAGGCCACAGTCCCTCCAAAGTGGGAGGTCCCGTTGTaGAAGAAGTCTATGGCGTTG +
Preference number: 5 (lower is better)
Translates to: CAWRCGQRTTMKATVPPKWEVPL*KKSMAL
Trigger: CAACGCCATAGACTTCTTCAACAACGGGACCTCCCA...CTTTGGAGGGACTGTGGCCTTCATCGTGGTCCTCTGCCCACACCTCCACGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CAA 90 bp TGGTACAGGTGGACATCAAAGTCACATTGTGGCAGCTGGCACAGAGCCACTGCCAAGTCGGCCAGTGCCTaGATGTGGGTCTTGCCCACC +
Preference number: 5 (lower is better)
Translates to: WYRWTSKSHCGSWHRATAKSASA*MWVLPT
Trigger: GGTGGGCAAGACCCACATCAAGGCACTGGCCGACTT...GGCAGTGGCTCTGTGCCAGCTGCCACAATGTGACTTTGATGTCCACCTGTACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CAA 90 bp ATCCTCCTACTTAATCTGAGCATATGGTACCCCAAAAGCACACACCCACTGCTCGACGGAGTGGTGTCCTaGCGGGCGGTGCCTCCTCGG +
Preference number: 5 (lower is better)
Translates to: ILLLNLSIWYPKSTHPLLDGVVS*RAVPPR
Trigger: CCGAGGAGGCACCGCCCGCAAGGACACCACTCCGTC...GAGCAGTGGGTGTGTGCTTTTGGGGTACCATATGCTCAGATTAAGTAGGAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CAA 90 bp GTGGACTCTAAAGCTGGGCTCTACCCATTCCTCTGCCTGGTTTGCCGGTGGAGGTCCGACGGGAACTTCTaGGAGCGGAATATCTGCAGC +
Preference number: 5 (lower is better)
Translates to: VDSKAGLYPFLCLVCRWRSDGNF*ERNICS
Trigger: GCTGCAGATATTCCGCTCCAAGAAGTTCCCGTCGGA...CCTCCACCGGCAAACCAGGCAGAGGAATGGGTAGAGCCCAGCTTTAGAGTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CAA 90 bp CAGAGGACCACGATGAAGGCCACAGTCCCTCCAAAGCCAGCACTCCTGTGCCAACAGAATCACCACTCCTaGCTTGGCGTCCTCTTGCCT +
Preference number: 5 (lower is better)
Translates to: QRTTMKATVPPKPALLCQQNHHS*LGVLLP
Trigger: AGGCAAGAGGACGCCAAGCAAGGAGTGGTGATTCTG...TTGGCACAGGAGTGCTGGCTTTGGAGGGACTGTGGCCTTCATCGTGGTCCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CAA 90 bp CACACACATTCCCACGGCTCCTTTCCACCTGTGCAGCAGCACCTGTTAGAAAACCAGAGCTGTGTTCAGTaGGTGTGCGGGGAGGGGAGG +
Preference number: 5 (lower is better)
Translates to: HTHSHGSFPPVQQHLLENQSCVQ*VCGEGR
Trigger: CCTCCCCTCCCCGCACACCAACTGAACACAGCTCTG...GTTTTCTAACAGGTGCTGCTGCACAGGTGGAAAGGAGCCGTGGGAATGTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CAA 90 bp CAGAGGACCACGATGAAGGCCACAGTCCCTCCAAAGCCAGCACTCCTGTGCCAATGCATGCTCAGGGCTTaGTTCCTTGACTCCAGAGGG +
Preference number: 5 (lower is better)
Translates to: QRTTMKATVPPKPALLCQCMLRA*FLDSRG
Trigger: CCCTCTGGAGTCAAGGAACAAAGCCCTGAGCATGCA...TTGGCACAGGAGTGCTGGCTTTGGAGGGACTGTGGCCTTCATCGTGGTCCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491190.5
CDS GCA 90 bp TTCTCTAAGTCAGGCTCCCTGAAGGTCAGGAGGAACTTGCGGACGTaGTCAGACCGAAGCCTATCAATGCTCCTGGCGTCAATGGCACGG +
Preference number: 5 (lower is better)
Translates to: FSKSGSLKVRRNLRT*SDRSLSMLLASMAR
Trigger: CCGTGCCATTGACGCCAGGAGCATTGATAGGCTTCGGTCTGAGCACGTCCGCAAGTTCCTCCTGACCTTCAGGGAGCCTGACTTAGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309879.9
ENST00000462833.6
ENST00000466617.5
ENST00000491190.5
CDS CCA 90 bp AGACAAGCCTCCGTGGGGCCCATTCTCCTCCAGGACCTGTCTGAATaGACAGGTCACCTCTGCTGCAACAGCCCTCTTTCTGAGACTTCA +
Preference number: 5 (lower is better)
Translates to: RQASVGPILLQDLSE*TGHLCCNSPLSETS
Trigger: TGAAGTCTCAGAAAGAGGGCTGTTGCAGCAGAGGTGACCTGTCCATTCAGACAGGTCCTGGAGGAGAATGGGCCCCACGGAGGCTTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309879.9
CDS-3UTR CAA 90 bp ACGATGAAGGCCACAGTCCCTCCAAAGCCAGCACTCCTGTGCCAAAGCCCCTGCCAGACACCCACGATGTaGGTGCAGGAGAAAATGAGA +
Preference number: 5 (lower is better)
Translates to: TMKATVPPKPALLCQSPCQTPTM*VQEKMR
Trigger: TCTCATTTTCTCCTGCACCAACATCGTGGGTGTCTG...GCAGGGGCTTTGGCACAGGAGTGCTGGCTTTGGAGGGACTGTGGCCTTCATCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CAA 90 bp GGAGGGTGTGTGCATGTGTGTACATACGTGTGCGTGTGTCAGAAAAGATGGGGCTGGCTCGCGCTGATGTaGTGCTCCTGTGCCAAGCAG +
Preference number: 5 (lower is better)
Translates to: GGCVHVCTYVCVCQKRWGWLALM*CSCAKQ
Trigger: CTGCTTGGCACAGGAGCACAACATCAGCGCGAGCCA...GCCCCATCTTTTCTGACACACGCACACGTATGTACACACATGCACACACCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CAA 90 bp CAAAGGCAGAAGCTGCTCTGGAGTCCAAGTGGAAAATCTCAGCAGCGCAGCCCTGGGACAGACTCAGGCTaGGCAGTTTTGGGTCCACAC +
Preference number: 5 (lower is better)
Translates to: QRQKLLWSPSGKSQQRSPGTDSG*AVLGPH
Trigger: GTGTGGACCCAAAACTGCCAAGCCTGAGTCTGTCCC...AGGGCTGCGCTGCTGAGATTTTCCACTTGGACTCCAGAGCAGCTTCTGCCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CAA 90 bp GTGTGGAGGGCACCACACTGCCTGTCGCAGGATGAGATTGCTTCCCTTGGTTCCCAGACACCCACGATGTaGGTGCAGGAGAAAATGAGA +
Preference number: 5 (lower is better)
Translates to: VWRAPHCLSQDEIASLGSQTPTM*VQEKMR
Trigger: TCTCATTTTCTCCTGCACCAACATCGTGGGTGTCTG...GGAACCAAGGGAAGCAATCTCATCCTGCGACAGGCAGTGTGGTGCCCTCCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CAA 90 bp GAGTCTTCTACAGAGGGAAACATCTTTGGTCAGCTGGGTGCTCGCAGGACGCTGCTCTGGCGGTTCATCTaGGCGATCATGGCCTTCTCT +
Preference number: 5 (lower is better)
Translates to: ESSTEGNIFGQLGARRTLLWRFI*AIMAFS
Trigger: AGAGAAGGCCATGATCGCCAAGATGAACCGCCAGAG...CAGCGTCCTGCGAGCACCCAGCTGACCAAAGATGTTTCCCTCTGTAGAAGACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CAA 90 bp CAGAGGACCACGATGAAGGCCACAGTCCCTCCAAAGCCAGCACTCCTGTGCCAATTGCACGTGAACATGTaGACAAAAGCCGCCAGGAAC +
Preference number: 5 (lower is better)
Translates to: QRTTMKATVPPKPALLCQLHVNM*TKAARN
Trigger: GTTCCTGGCGGCTTTTGTCAACATGTTCACGTGCAA...TTGGCACAGGAGTGCTGGCTTTGGAGGGACTGTGGCCTTCATCGTGGTCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CAA 90 bp CCCTGCAGGTGCAGGGTGGTGGCCTGTCTGAAGTTTAAAGGCTCACATAGAAAAAAGTACTCGGGGAAGTaGCAGTTGGGCCAGGGGCTG +
Preference number: 5 (lower is better)
Translates to: PCRCRVVACLKFKGSHRKKYSGK*QLGQGL
Trigger: CAGCCCCTGGCCCAACTGCAACTTCCCCGAGTACTT...TTTTCTATGTGAGCCTTTAAACTTCAGACAGGCCACCACCCTGCACCTGCAGGG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CAA 90 bp GAGTCTTCTACAGAGGGAAACATCTTTGGTCAGCTGGGTGCTCGCAGGACGCTGCAGAGGGAAACATCTTaGGTCAGCTGGGTGCTCGCA +
Preference number: 5 (lower is better)
Translates to: ESSTEGNIFGQLGARRTLQRETS*VSWVLA
Trigger: TGCGAGCACCCAGCTGACCAAAGATGTTTCCCTCTG...CAGCGTCCTGCGAGCACCCAGCTGACCAAAGATGTTTCCCTCTGTAGAAGACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CAA 90 bp TTGGCGTCCTCTTGCCTCCCCCTCGTAATTAGTTCTGTTTCCCTCCTAGGGCACCAGAGGGAAACATCTTaGGTCAGCTGGGTGCTCGCA +
Preference number: 5 (lower is better)
Translates to: LASSCLPLVISSVSLLGHQRETS*VSWVLA
Trigger: TGCGAGCACCCAGCTGACCAAAGATGTTTCCCTCTG...GTGCCCTAGGAGGGAAACAGAACTAATTACGAGGGGGAGGCAAGAGGACGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CAA 90 bp CAGCAAAGGCAGAAGCTGCTCTGGAGTCCAAGTGGAAAATCTCAGCAGCGCAGCCAGAATCACCACTCCTaGCTTGGCGTCCTCTTGCCT +
Preference number: 5 (lower is better)
Translates to: QQRQKLLWSPSGKSQQRSQNHHS*LGVLLP
Trigger: AGGCAAGAGGACGCCAAGCAAGGAGTGGTGATTCTG...GCTGCGCTGCTGAGATTTTCCACTTGGACTCCAGAGCAGCTTCTGCCTTTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CAA 90 bp CACCACTGGCGGGCGATGTGGAGGGGCAGGGAACTTGAGAACAACAGCTGGAAGCACACTTTACTCAGGTaGGAAGCAGAACGAAAACCC +
Preference number: 5 (lower is better)
Translates to: HHWRAMWRGRELENNSWKHTLLR*EAERKP
Trigger: GGGTTTTCGTTCTGCTTCCAACCTGAGTAAAGTGTG...CTTCCAGCTGTTGTTCTCAAGTTCCCTGCCCCTCCACATCGCCCGCCAGTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS TCA 90 bp GGTCGTCTACCTGCTTGGAGTACTTCTTCTCTAAGTCAGGCTCCCTaGAGGTCAGGAGGAACTTGCGGACGTGCTCAGACCGAAGCCTAT +
Preference number: 5 (lower is better)
Translates to: GRLPAWSTSSLSQAP*RSGGTCGRAQTEAY
Trigger: ATAGGCTTCGGTCTGAGCACGTCCGCAAGTTCCTCCTGACCTTCAGGGAGCCTGACTTAGAGAAGAAGTACTCCAAGCAGGTAGACGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309879.9
ENST00000462833.6
ENST00000466617.5
ENST00000491190.5
CDS GCA 90 bp GGGCCCATTCTCCTCCAGGACCTGTCTGAATGGACAGGTCACCTCTaGTGCAACAGCCCTCTTTCTGAGACTTCATTCCTCAGGACTTAC +
Preference number: 5 (lower is better)
Translates to: GPILLQDLSEWTGHL*CNSPLSETSFLRTY
Trigger: GTAAGTCCTGAGGAATGAAGTCTCAGAAAGAGGGCTGTTGCAGCAGAGGTGACCTGTCCATTCAGACAGGTCCTGGAGGAGAATGGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309879.9
CDS-3UTR CAA 90 bp AGCACGGGACAGACTCAGGCTTGGCAGTTTTGGGTCCACACACTTTGCTTCTCACTCTGGCGGTTCATCTaGGCGATCATGGCCTTCTCT +
Preference number: 5 (lower is better)
Translates to: STGQTQAWQFWVHTLCFSLWRFI*AIMAFS
Trigger: AGAGAAGGCCATGATCGCCAAGATGAACCGCCAGAG...TGAGAAGCAAAGTGTGTGGACCCAAAACTGCCAAGCCTGAGTCTGTCCCGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CAA 90 bp AGCACGGGACAGACTCAGGCTTGGCAGTTTTGGGTCCACACACTTTGCTTCTCATTGTGCCCGATGGAGTaGGTTCTCTGGCGGTTCATC +
Preference number: 5 (lower is better)
Translates to: STGQTQAWQFWVHTLCFSLCPME*VLWRFI
Trigger: GATGAACCGCCAGAGAACCAACTCCATCGGGCACAA...TGAGAAGCAAAGTGTGTGGACCCAAAACTGCCAAGCCTGAGTCTGTCCCGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CAA 90 bp ACACACACATTCCCACGGCTCCTTTCCACCTGTGCAGCAGCACCTGTTAGAAAAATCCGCTTCATCTCCTaGGACACCTGGTTGCCACCC +
Preference number: 5 (lower is better)
Translates to: THTFPRLLSTCAAAPVRKIRFIS*DTWLPP
Trigger: GGGTGGCAACCAGGTGTCCAAGGAGATGAAGCGGAT...TTTTCTAACAGGTGCTGCTGCACAGGTGGAAAGGAGCCGTGGGAATGTGTGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CAA 90 bp CACACACATTCCCACGGCTCCTTTCCACCTGTGCAGCAGCACCTGTTAGAAAACTGGGCGTTCTTGTCCTaGGGGTCTTCAAAGCCCATC +
Preference number: 5 (lower is better)
Translates to: HTHSHGSFPPVQQHLLENWAFLS*GSSKPI
Trigger: GATGGGCTTTGAAGACCCCAAGGACAAGAACGCCCA...GTTTTCTAACAGGTGCTGCTGCACAGGTGGAAAGGAGCCGTGGGAATGTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CAA 90 bp GTCTTCTACAGAGGGAAACATCTTTGGTCAGCTGGGTGCTCGCAGGACGCTGGCCGGTCGTCTACCTGCTaGGAGTACTTCTTCTCTAAG +
Preference number: 5 (lower is better)
Translates to: VFYRGKHLWSAGCSQDAGRSSTC*EYFFSK
Trigger: CTTAGAGAAGAAGTACTCCAAGCAGGTAGACGACCG...GCCAGCGTCCTGCGAGCACCCAGCTGACCAAAGATGTTTCCCTCTGTAGAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CAA 90 bp TGCAGGGTGGTGGCCTGTCTGAAGTTTAAAGGCTCACATAGAAAAGCAGACCCCAGGGTGCTGTTCATCTaGGACCGCACGATCTTCCTG +
Preference number: 5 (lower is better)
Translates to: CRVVACLKFKGSHRKADPRVLFI*DRTIFL
Trigger: CAGGAAGATCGTGCGGTCCAAGATGAACAGCACCCT...GGGGTCTGCTTTTCTATGTGAGCCTTTAAACTTCAGACAGGCCACCACCCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CAA 90 bp GGAAGCCATGACCATGGGAGAACATGGGATGAACTCAGCACACACACTTTACTCAAGAAGTCTATGGCGTaGGCGGTGACCAGCAGGTCG +
Preference number: 5 (lower is better)
Translates to: GSHDHGRTWDELSTHTLLKKSMA*AVTSRS
Trigger: CGACCTGCTGGTCACCGCCAACGCCATAGACTTCTT...GAGTAAAGTGTGTGTGCTGAGTTCATCCCATGTTCTCCCATGGTCATGGCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CAA 90 bp ACACACACATTCCCACGGCTCCTTTCCACCTGTGCAGCAGCACCTGTTAGAAAAACCTTCAATGCCACCTaGGTTGCATGCTCAGGGCAC +
Preference number: 5 (lower is better)
Translates to: THTFPRLLSTCAAAPVRKTFNAT*VACSGH
Trigger: GTGCCCTGAGCATGCAACCAAGGTGGCATTGAAGGT...TTTTCTAACAGGTGCTGCTGCACAGGTGGAAAGGAGCCGTGGGAATGTGTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS GCA 90 bp CCCATTCTCCTCCAGGACCTGTCTGAATGGACAGGTCACCTCTGCTaGAACAGCCCTCTTTCTGAGACTTCATTCCTCAGGACTTACTTC +
Preference number: 5 (lower is better)
Translates to: PILLQDLSEWTGHLC*NSPLSETSFLRTYF
Trigger: GAAGTAAGTCCTGAGGAATGAAGTCTCAGAAAGAGGGCTGTTGCAGCAGAGGTGACCTGTCCATTCAGACAGGTCCTGGAGGAGAATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309879.9
CDS GCA 90 bp GATGTACTTCATCTGGTCCATCAGCTTCATGGCAAAGTCGGCCAGTaGCTTGATGTGGGTCTTGCCCACCTTGTCGTAGGTAGAGTCGTT +
Preference number: 5 (lower is better)
Translates to: DVLHLVHQLHGKVGQ*LDVGLAHLVVGRVV
Trigger: AACGACTCTACCTACGACAAGGTGGGCAAGACCCACATCAAGGCACTGGCCGACTTTGCCATGAAGCTGATGGACCAGATGAAGTACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309879.9
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CAA 90 bp TTGGCGTCCTCTTGCCTCCCCCTCGTAATTAGTTCTGTTTCCCTCCTAGGGCACATCATATCCTCCTGCTaGGCGTTGATGTCTGCTTTC +
Preference number: 5 (lower is better)
Translates to: LASSCLPLVISSVSLLGHIISSC*ALMSAF
Trigger: GAAAGCAGACATCAACGCCAAGCAGGAGGATATGAT...GTGCCCTAGGAGGGAAACAGAACTAATTACGAGGGGGAGGCAAGAGGACGCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CAA 90 bp CACACACATTCCCACGGCTCCTTTCCACCTGTGCAGCAGCACCTGTTAGAAAACTTGCACGTGAACATGTaGACAAAAGCCGCCAGGAAC +
Preference number: 5 (lower is better)
Translates to: HTHSHGSFPPVQQHLLENLHVNM*TKAARN
Trigger: GTTCCTGGCGGCTTTTGTCAACATGTTCACGTGCAA...GTTTTCTAACAGGTGCTGCTGCACAGGTGGAAAGGAGCCGTGGGAATGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462833.6
ENST00000491190.5
CDS-3UTR CAA 90 bp CACACACATTCCCACGGCTCCTTTCCACCTGTGCAGCAGCACCTGTTAGAAAACAAGCAATGGAAAGATTaGGGCATGGGCCCTAAGGAT +
Preference number: 5 (lower is better)
Translates to: HTHSHGSFPPVQQHLLENKQWKD*GMGPKD
Trigger: ATCCTTAGGGCCCATGCCCAAATCTTTCCATTGCTT...GTTTTCTAACAGGTGCTGCTGCACAGGTGGAAAGGAGCCGTGGGAATGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CAA 90 bp CAAAGCACCTGGCCTTCTGTAAGCACTCTGGAATCTGTGGGCGCTGCCTCTGTAACCTCCAAGCTCATGTaGGAGGTGAAGATCATTCTA +
Preference number: 5 (lower is better)
Translates to: QSTWPSVSTLESVGAASVTSKLM*EVKIIL
Trigger: TAGAATGATCTTCACCTCCAACATGAGCTTGGAGGT...TACAGAGGCAGCGCCCACAGATTCCAGAGTGCTTACAGAAGGCCAGGTGCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CAA 90 bp TGCAGGGTGGTGGCCTGTCTGAAGTTTAAAGGCTCACATAGAAAAGCAGACCCCTTGGGTCCACACACTTaGCTTCTCAGAGCTGTGTTC +
Preference number: 5 (lower is better)
Translates to: CRVVACLKFKGSHRKADPLGPHT*LLRAVF
Trigger: GAACACAGCTCTGAGAAGCAAAGTGTGTGGACCCAA...GGGGTCTGCTTTTCTATGTGAGCCTTTAAACTTCAGACAGGCCACCACCCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CAA 90 bp GGAAGCCATGACCATGGGAGAACATGGGATGAACTCAGCACACACACTTTACTCTGCTCTGGTGGTACCTaGGAAAACCCAAAACTGCCA +
Preference number: 5 (lower is better)
Translates to: GSHDHGRTWDELSTHTLLCSGGT*ENPKLP
Trigger: TGGCAGTTTTGGGTTTTCCAAGGTACCACCAGAGCA...GAGTAAAGTGTGTGTGCTGAGTTCATCCCATGTTCTCCCATGGTCATGGCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CAA 90 bp AATCTGAGCATATGGTACCCCAAAAGCACACACCCACTGCTCTGGTGGTACCTTTATTCCATCTGCGTTTaGCTTAGGGGAAGGAGGGTG +
Preference number: 5 (lower is better)
Translates to: NLSIWYPKSTHPLLWWYLYSICV*LRGRRV
Trigger: CACCCTCCTTCCCCTAAGCAAAACGCAGATGGAATA...AAGGTACCACCAGAGCAGTGGGTGTGTGCTTTTGGGGTACCATATGCTCAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS-3UTR CAA 90 bp TCAGCACACACACTTTACTCAGGTTGGAAGCAGAACGAAAACCCAACACCACTGCGGTCGTCTACCTGCTaGGAGTACTTCTTCTCTAAG +
Preference number: 5 (lower is better)
Translates to: SAHTLYSGWKQNENPTPLRSSTC*EYFFSK
Trigger: CTTAGAGAAGAAGTACTCCAAGCAGGTAGACGACCG...CAGTGGTGTTGGGTTTTCGTTCTGCTTCCAACCTGAGTAAAGTGTGTGTGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS TCA 90 bp GAGACAAGCAAATTCAGGTGGGCGTTATCAAATCCACTGAAGGCTTaGATAGAGCAAAAAGGTAGAGGAGGGGAGAATTCACTCTCTTCT +
Preference number: 5 (lower is better)
Translates to: ETSKFRWALSNPLKA*IEQKGRGGENSLSS
Trigger: AGAAGAGAGTGAATTCTCCCCTCCTCTACCTTTTTGCTCTATTCAAGCCTTCAGTGGATTTGATAACGCCCACCTGAATTTGCTTGTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470367.1
CDS TCA 90 bp GAGATTGCCAAATTCAGGTGGGCGTTATCAAATCCACTGAAGGCTTaGATAGAGCAAAAAGGTAGAGGAGGGGAGAATTCACTCTCTTCT +
Preference number: 5 (lower is better)
Translates to: EIAKFRWALSNPLKA*IEQKGRGGENSLSS
Trigger: AGAAGAGAGTGAATTCTCCCCTCCTCTACCTTTTTGCTCTATTCAAGCCTTCAGTGGATTTGATAACGCCCACCTGAATTTGGCAATCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491190.5
CDS GCA 72 bp GGACGAGACGGGACGGAGTGGTGTCCTTGCGGGCGGTaGCTCCTCGGGCCGGCAGTGCCCGGGCGCGGCGCT +
Preference number: 6 (lower is better)
Translates to: GRDGTEWCPCGR*LLGPAVPGRGA
Trigger: AGCGCCGCGCCCGGGCACTGCCGGCCCGAGGAGGCACCGCCCGCAAGGACACCACTCCGTCCCGTCTCGTCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS TCA 72 bp CGCCGCGCTCCTGCCAGGCGGACTTGGAGCGGAAGCTaGAGCCGAAGCCCCCGGCCAGGGGGTCGTCACCGC +
Preference number: 6 (lower is better)
Translates to: RRAPARRTWSGS*SRSPRPGGRHR
Trigger: GCGGTGACGACCCCCTGGCCGGGGGCTTCGGCTTCAGCTTCCGCTCCAAGTCCGCCTGGCAGGAGCGCGGCG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS GCA 72 bp CGGAGTTGCGGACGAGACGGGACGGAGTGGTGTCCTTaGGGGCGGTGCCTCCTCGGGCCGGCAGTGCCCGGG +
Preference number: 6 (lower is better)
Translates to: RSCGRDGTEWCP*GRCLLGPAVPG
Trigger: CCCGGGCACTGCCGGCCCGAGGAGGCACCGCCCGCAAGGACACCACTCCGTCCCGTCTCGTCCGCAACTCCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS CAA 72 bp CCGGAGTTGCGGACGAGACGGGACGGAGTGGTGTCCTaGCGGGCGGTGCCTCCTCGGGCCGGCAGTGCCCGG +
Preference number: 6 (lower is better)
Translates to: PELRTRRDGVVS*RAVPPRAGSAR
Trigger: CCGGGCACTGCCGGCCCGAGGAGGCACCGCCCGCAAGGACACCACTCCGTCCCGTCTCGTCCGCAACTCCGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS CAA 90 bp CTGCCGCGACCGCAGTCGTCGCCGCCGCGCTCCTGCCAGGCGGACTaGGAGCGGAAGCTGAAGCCGAAGCCCCCGGCCAGGGGGTCGTCA +
Preference number: 6 (lower is better)
Translates to: LPRPQSSPPRSCQAD*ERKLKPKPPARGSS
Trigger: TGACGACCCCCTGGCCGGGGGCTTCGGCTTCAGCTTCCGCTCCAAGTCCGCCTGGCAGGAGCGCGGCGGCGACGACTGCGGTCGCGGCAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS GCA 72 bp GAGGGCGGCTCGGCGGGGGTCCCGGCGAAGAGACACTaGGGGTGCGCTTTCCTCGCAGCGGACTGGGAGCGA +
Preference number: 6 (lower is better)
Translates to: EGGSAGVPAKRH*GCAFLAADWER
Trigger: TCGCTCCCAGTCCGCTGCGAGGAAAGCGCACCCGCAGTGTCTCTTCGCCGGGACCCCCGCCGAGCCGCCCTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS GCA 72 bp CGGCTGCCGCGACCGCAGTCGTCGCCGCCGCGCTCCTaGCAGGCGGACTTGGAGCGGAAGCTGAAGCCGAAG +
Preference number: 6 (lower is better)
Translates to: RLPRPQSSPPRS*QADLERKLKPK
Trigger: CTTCGGCTTCAGCTTCCGCTCCAAGTCCGCCTGGCAGGAGCGCGGCGGCGACGACTGCGGTCGCGGCAGCCG
74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS CCA 72 bp GACGAGGGCCGGAGTTGCGGACGAGACGGGACGGAGTaGTGTCCTTGCGGGCGGTGCCTCCTCGGGCCGGCA +
Preference number: 6 (lower is better)
Translates to: DEGRSCGRDGTE*CPCGRCLLGPA
Trigger: TGCCGGCCCGAGGAGGCACCGCCCGCAAGGACACCACTCCGTCCCGTCTCGTCCGCAACTCCGGCCCTCGTC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS CCA 72 bp GCTGCTGCGCCGCACGCGGAGAGACGTCCGGGATCCTaGCTCGCGTCGAGCTCGACGAGGGCCGGAGTTGCG +
Preference number: 6 (lower is better)
Translates to: AAAPHAERRPGS*LASSSTRAGVA
Trigger: CGCAACTCCGGCCCTCGTCGAGCTCGACGCGAGCCAGGATCCCGGACGTCTCTCCGCGTGCGGCGCAGCAGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS GCA 72 bp CCTCCGAGGTGGGGTCGCAGGGACTGGTCTGGCTGCTaGTGCGCCGCACGCGGAGAGACGTCCGGGATCCTG +
Preference number: 6 (lower is better)
Translates to: PPRWGRRDWSGC*CAARGETSGIL
Trigger: CAGGATCCCGGACGTCTCTCCGCGTGCGGCGCAGCAGCAGCCAGACCAGTCCCTGCGACCCCACCTCGGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS GCA 72 bp ACGGTCCACCAGATGCCCTCAGAGGCGCTGCGTGGCTaGGGCAGCAGCAGGCCCACCACCTGGACGGCCAGC +
Preference number: 6 (lower is better)
Translates to: TVHQMPSEALRG*GSSRPTTWTAS
Trigger: GCTGGCCGTCCAGGTGGTGGGCCTGCTGCTGCCGCAGCCACGCAGCGCCTCTGAGGGCATCTGGTGGACCGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS CCA 72 bp TGGTCCTGGGCGTTGGTGCGCAGGGCGATGGCCAGGTaGAGGGCGGACAGGAGCACCCCGCTGAGCACTGCG +
Preference number: 6 (lower is better)
Translates to: WSWALVRRAMAR*RADRSTPLSTA
Trigger: CGCAGTGCTCAGCGGGGTGCTCCTGTCCGCCCTCCACCTGGCCATCGCCCTGCGCACCAACGCCCAGGACCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS CAA 90 bp GACGTCCGGGATCCTGGCTCGCGTCGAGCTCGACGAGGGCCGGAGTaGCGGACGAGACGGGACGGAGTGGTGTCCTTGCGGGCGGTGCCT +
Preference number: 6 (lower is better)
Translates to: DVRDPGSRRARRGPE*RTRRDGVVSLRAVP
Trigger: AGGCACCGCCCGCAAGGACACCACTCCGTCCCGTCTCGTCCGCAACTCCGGCCCTCGTCGAGCTCGACGCGAGCCAGGATCCCGGACGTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS GCA 72 bp TTGCCTCCGAGGTGGGGTCGCAGGGACTGGTCTGGCTaGTGCTGCGCCGCACGCGGAGAGACGTCCGGGATC +
Preference number: 6 (lower is better)
Translates to: LPPRWGRRDWSG*CCAARGETSGI
Trigger: GATCCCGGACGTCTCTCCGCGTGCGGCGCAGCAGCAGCCAGACCAGTCCCTGCGACCCCACCTCGGAGGCAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS TCA 72 bp GCAGGCCCACCACCTGGACGGCCAGCACCACGGCGATaGGCGCATAGCAGGCCAGGCCCATGTGGTCCTGGT +
Preference number: 6 (lower is better)
Translates to: AGPPPGRPAPRR*AHSRPGPCGPG
Trigger: ACCAGGACCACATGGGCCTGGCCTGCTATGCGCTCATCGCCGTGGTGCTGGCCGTCCAGGTGGTGGGCCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS GCA 72 bp ATCCTGGCTCGCGTCGAGCTCGACGAGGGCCGGAGTTaGGGACGAGACGGGACGGAGTGGTGTCCTTGCGGG +
Preference number: 6 (lower is better)
Translates to: ILARVELDEGRS*GRDGTEWCPCG
Trigger: CCCGCAAGGACACCACTCCGTCCCGTCTCGTCCGCAACTCCGGCCCTCGTCGAGCTCGACGCGAGCCAGGAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS CAA 72 bp GATCCTGGCTCGCGTCGAGCTCGACGAGGGCCGGAGTaGCGGACGAGACGGGACGGAGTGGTGTCCTTGCGG +
Preference number: 6 (lower is better)
Translates to: DPGSRRARRGPE*RTRRDGVVSLR
Trigger: CCGCAAGGACACCACTCCGTCCCGTCTCGTCCGCAACTCCGGCCCTCGTCGAGCTCGACGCGAGCCAGGATC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS CCA 72 bp GCCTGGGCCCTACCCAGCACTACACAGGCTGCCCTGTaGGGATGGAGGGGACCATGGGCACCTCAGCAGGGA +
Preference number: 6 (lower is better)
Translates to: AWALPSTTQAAL*GWRGPWAPQQG
Trigger: TCCCTGCTGAGGTGCCCATGGTCCCCTCCATCCCCACAGGGCAGCCTGTGTAGTGCTGGGTAGGGCCCAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476455.1
ENST00000491190.5
CDS CAA 72 bp GAGACAAGCTGCTTCAGCAGGAACTGGTCCTGGGCGTaGGTGCGCAGGGCGATGGCCAGGTGGAGGGCGGAC +
Preference number: 6 (lower is better)
Translates to: ETSCFSRNWSWA*VRRAMARWRAD
Trigger: GTCCGCCCTCCACCTGGCCATCGCCCTGCGCACCAACGCCCAGGACCAGTTCCTGCTGAAGCAGCTTGTCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS CCA 72 bp AGACAAGCTGCTTCAGCAGGAACTGGTCCTGGGCGTTaGTGCGCAGGGCGATGGCCAGGTGGAGGGCGGACA +
Preference number: 6 (lower is better)
Translates to: RQAASAGTGPGR*CAGRWPGGGRT
Trigger: TGTCCGCCCTCCACCTGGCCATCGCCCTGCGCACCAACGCCCAGGACCAGTTCCTGCTGAAGCAGCTTGTCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS CAA 72 bp GCCAGGCCCATGTGGTCCTGGTGGAAGGCGGCGCGGTaGCAAAGCACAGCCATGATGAGGATCACGCCGACG +
Preference number: 6 (lower is better)
Translates to: ARPMWSWWKAAR*QSTAMMRITPT
Trigger: CGTCGGCGTGATCCTCATCATGGCTGTGCTTTGCAACCGCGCCGCCTTCCACCAGGACCACATGGGCCTGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS GCA 72 bp CGCGTTGACCTGGCTCGCGCTGATGTTGTGCTCCTGTaGCAAGCAGCCCAGCAGGTCCCTGGAGTTGCACGT +
Preference number: 6 (lower is better)
Translates to: RVDLARADVVLL*QAAQQVPGVAR
Trigger: ACGTGCAACTCCAGGGACCTGCTGGGCTGCTTGGCACAGGAGCACAACATCAGCGCGAGCCAGGTCAACGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309879.9
ENST00000462833.6
ENST00000466617.5
ENST00000468683.1
ENST00000474577.5
ENST00000491190.5
CDS GCA 72 bp GGATCCGCGTCAGAAGTCCCAGGTCCGAAATGGAGTTaGCTCCGAGGTGGGGTCGCAGGGACTGGTCTGGCT +
Preference number: 6 (lower is better)
Translates to: GSASEVPGPKWS*LRGGVAGTGLA
Trigger: AGCCAGACCAGTCCCTGCGACCCCACCTCGGAGGCAACTCCATTTCGGACCTGGGACTTCTGACGCGGATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS GCA 72 bp CCCGTGGGCTTCCAGGCCCAAGGCTGTGCTAAACCCTaGAGCCTCCCGCTACCCTGCTCCTGTCAAATGCCT +
Preference number: 6 (lower is better)
Translates to: PVGFQAQGCAKP*SLPLPCSCQMP
Trigger: AGGCATTTGACAGGAGCAGGGTAGCGGGAGGCTGCAGGGTTTAGCACAGCCTTGGGCCTGGAAGCCCACGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478092.1
CDS CCA 72 bp CTTCTCACTGCTCCATCCAGACCTCCCACTCCACCATaGTCAGGGGCCAGGAGGTGGGCAGTCGGCCCATGT +
Preference number: 6 (lower is better)
Translates to: LLTAPSRPPTPP*SGARRWAVGPC
Trigger: ACATGGGCCGACTGCCCACCTCCTGGCCCCTGACCATGGTGGAGTGGGAGGTCTGGATGGAGCAGTGAGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466617.5
CDS CAA 72 bp AGGATCCGCGTCAGAAGTCCCAGGTCCGAAATGGAGTaGCCTCCGAGGTGGGGTCGCAGGGACTGGTCTGGC +
Preference number: 6 (lower is better)
Translates to: RIRVRSPRSEME*PPRWGRRDWSG
Trigger: GCCAGACCAGTCCCTGCGACCCCACCTCGGAGGCAACTCCATTTCGGACCTGGGACTTCTGACGCGGATCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS CAA 90 bp AGAACATTGGAGACAAGCTGCTTCAGCAGGAACTGGTCCTGGGCGTaGGTGCGCAGGGCGATGGCCAGGTGGAGGGCGGACAGGAGCACC +
Preference number: 6 (lower is better)
Translates to: RTLETSCFSRNWSWA*VRRAMARWRADRST
Trigger: GGTGCTCCTGTCCGCCCTCCACCTGGCCATCGCCCTGCGCACCAACGCCCAGGACCAGTTCCTGCTGAAGCAGCTTGTCTCCAATGTTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS TCA 72 bp GGAGGAGGAGGGCACAGCCCCGAGGTGAGAAGTAGCTaGGGATCCGCGTCAGAAGTCCCAGGTCCGAAATGG +
Preference number: 6 (lower is better)
Translates to: GGGGHSPEVRSS*GSASEVPGPKW
Trigger: CCATTTCGGACCTGGGACTTCTGACGCGGATCCTCAGCTACTTCTCACCTCGGGGCTGTGCCCTCCTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS TCA 72 bp AGCCTCCGTGGGGCCCATTCTCCTCCAGGACCTGTCTaGATGGACAGGTCACCTCTGCTGCAACAGCCCTCT +
Preference number: 6 (lower is better)
Translates to: SLRGAHSPPGPV*MDRSPLLQQPS
Trigger: AGAGGGCTGTTGCAGCAGAGGTGACCTGTCCATTCAGACAGGTCCTGGAGGAGAATGGGCCCCACGGAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309879.9
CDS TCA 72 bp GCATGCGCACGGGCAGCAGCGTGTAGATGGTGTAGATaGAGAACACGGTCCACCAGATGCCCTCAGAGGCGC +
Preference number: 6 (lower is better)
Translates to: ACARAAACRWCR*RTRSTRCPQRR
Trigger: GCGCCTCTGAGGGCATCTGGTGGACCGTGTTCTTCATCTACACCATCTACACGCTGCTGCCCGTGCGCATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS CAA 72 bp AAGTCTATGGCGTTGGCGGTGACCAGCAGGTCGGCGTaGTCGAAGAGCGTGACACCTGGCACCTCCACGATG +
Preference number: 6 (lower is better)
Translates to: KSMALAVTSRSA*SKSVTPGTSTM
Trigger: CATCGTGGAGGTGCCAGGTGTCACGCTCTTCGACAACGCCGACCTGCTGGTCACCGCCAACGCCATAGACTT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309879.9
ENST00000462833.6
ENST00000474577.5
ENST00000491190.5
CDS CAA 90 bp AACACCAGGGTGATGGTGAACACCCCAACCAGGGTGCTGTTCATCTaGGACCGCACGATCTTCCTGGAGAGGGTCTGCAGTGGGGAGGGG +
Preference number: 6 (lower is better)
Translates to: NTRVMVNTPTRVLFI*DRTIFLERVCSGEG
Trigger: CCCCTCCCCACTGCAGACCCTCTCCAGGAAGATCGTGCGGTCCAAGATGAACAGCACCCTGGTTGGGGTGTTCACCATCACCCTGGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309879.9
ENST00000462833.6
ENST00000466617.5
ENST00000468683.1
ENST00000491190.5
CDS CCA 72 bp ATGTGGATGCGTCCTGCCTTGCCGCCAGCCTCCATGTaGTTGGCTAGCGTGACATCGTTAGACCAGACGTCG +
Preference number: 6 (lower is better)
Translates to: MWMRPALPPASM*LASVTSLDQTS
Trigger: CGACGTCTGGTCTAACGATGTCACGCTAGCCAACCACATGGAGGCTGGCGGCAAGGCAGGACGCATCCACAT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309879.9
ENST00000462833.6
ENST00000466617.5
ENST00000491190.5
CDS CCA 72 bp GACCAGCAGGTCGGCGTTGTCGAAGAGCGTGACACCTaGCACCTCCACGATGAGCACGTAGATGAGCTCGAT +
Preference number: 6 (lower is better)
Translates to: DQQVGVVEERDT*HLHDEHVDELD
Trigger: ATCGAGCTCATCTACGTGCTCATCGTGGAGGTGCCAGGTGTCACGCTCTTCGACAACGCCGACCTGCTGGTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309879.9
ENST00000462833.6
ENST00000474577.5
ENST00000491190.5
CDS CCA 72 bp GGTACAGCCGCTCCAGTTTGTCCGACGGGAACTTCTTaGAGCGGAATATCTGCAGCAACGCCAGGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: GTAAPVCPTGTS*SGISAATPGSR
Trigger: CCTGCTGCCTGGCGTTGCTGCAGATATTCCGCTCCAAGAAGTTCCCGTCGGACAAACTGGAGCGGCTGTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS CCA 72 bp ATGAGAACATTGGAGACAAGCTGCTTCAGCAGGAACTaGTCCTGGGCGTTGGTGCGCAGGGCGATGGCCAGG +
Preference number: 6 (lower is better)
Translates to: MRTLETSCFSRN*SWALVRRAMAR
Trigger: CCTGGCCATCGCCCTGCGCACCAACGCCCAGGACCAGTTCCTGCTGAAGCAGCTTGTCTCCAATGTTCTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS CCA 72 bp AGACAAGCTTACCTCCAACTGAGTGCGGAACCTAGATaGGGCCATGTCTTCCGTGGGACAGGCCTGGGCCCT +
Preference number: 6 (lower is better)
Translates to: RQAYLQLSAEPR*GHVFRGTGLGP
Trigger: AGGGCCCAGGCCTGTCCCACGGAAGACATGGCCCCATCTAGGTTCCGCACTCAGTTGGAGGTAAGCTTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476455.1
CDS CCA 72 bp ATTGGAGACAAGCTCCAACTGAGTGCGGAACCTAGATaGGGCCATGTCTTCCGTGGGACAGGCCTGGGCCCT +
Preference number: 6 (lower is better)
Translates to: IGDKLQLSAEPR*GHVFRGTGLGP
Trigger: AGGGCCCAGGCCTGTCCCACGGAAGACATGGCCCCATCTAGGTTCCGCACTCAGTTGGAGCTTGTCTCCAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491190.5
CDS CAA 90 bp TGTGGTGGGTTGTGCCCGATGGAGTTGGTTCTCTGGCGGTTCATCTaGGCGATCATGGCCTTCTCTTCTTTCCGCTTCTGGGTGCAGCGC +
Preference number: 6 (lower is better)
Translates to: CGGLCPMELVLWRFI*AIMAFSSFRFWVQR
Trigger: GCGCTGCACCCAGAAGCGGAAAGAAGAGAAGGCCATGATCGCCAAGATGAACCGCCAGAGAACCAACTCCATCGGGCACAACCCACCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309879.9
ENST00000462833.6
ENST00000466617.5
ENST00000491190.5
CDS CAA 90 bp GCCCTGCAGGGGACAGGAATCAGCCACAGTCATCACATCTCTGGCTaGACCTTGCCACCATCTGTCTCCCCACATGCTGCAGGTCCTTCT +
Preference number: 6 (lower is better)
Translates to: ALQGTGISHSHHISG*TLPPSVSPHAAGPS
Trigger: AGAAGGACCTGCAGCATGTGGGGAGACAGATGGTGGCAAGGTCAAGCCAGAGATGTGATGACTGTGGCTGATTCCTGTCCCCTGCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478092.1
CDS TCA 72 bp CTGCTGGGCGTGCAGGTACAGGGCCAGCACAAAGACTaGGATGATGATGGGCGTCACCACCTTCAATGCCAC +
Preference number: 6 (lower is better)
Translates to: LLGVQVQGQHKD*DDDGRHHLQCH
Trigger: GTGGCATTGAAGGTGGTGACGCCCATCATCATCTCAGTCTTTGTGCTGGCCCTGTACCTGCACGCCCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309879.9
ENST00000462833.6
ENST00000491190.5
CDS TCA 72 bp GCAGCCTCCCGCTACCCTGCTCCTGTCAAATGCCTGTaGATGCAAGACACAAGGAGCCTGCACCTGTGTCCT +
Preference number: 6 (lower is better)
Translates to: AASRYPAPVKCL*MQDTRSLHLCP
Trigger: AGGACACAGGTGCAGGCTCCTTGTGTCTTGCATTCACAGGCATTTGACAGGAGCAGGGTAGCGGGAGGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478092.1
CDS GCA 72 bp TCAGGCTCCCTGAAGGTCAGGAGGAACTTGCGGACGTaGTCAGACCGAAGCCTATCAATGCTCCTGGCGTCA +
Preference number: 6 (lower is better)
Translates to: SGSLKVRRNLRT*SDRSLSMLLAS
Trigger: TGACGCCAGGAGCATTGATAGGCTTCGGTCTGAGCACGTCCGCAAGTTCCTCCTGACCTTCAGGGAGCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309879.9
ENST00000462833.6
ENST00000466617.5
ENST00000491190.5
CDS GCA 72 bp CCTCCCGCTACCCTGCTCCTGTCAAATGCCTGTGAATaGAAGACACAAGGAGCCTGCACCTGTGTCCTCGAC +
Preference number: 6 (lower is better)
Translates to: PPATLLLSNACE*KTQGACTCVLD
Trigger: GTCGAGGACACAGGTGCAGGCTCCTTGTGTCTTGCATTCACAGGCATTTGACAGGAGCAGGGTAGCGGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478092.1
CDS CCA 72 bp TCCGTGGGGCCCATTCTCCTCCAGGACCTGTCTGAATaGACAGGTCACCTCTGCTGCAACAGCCCTCTTTCT +
Preference number: 6 (lower is better)
Translates to: SVGPILLQDLSE*TGHLCCNSPLS
Trigger: AGAAAGAGGGCTGTTGCAGCAGAGGTGACCTGTCCATTCAGACAGGTCCTGGAGGAGAATGGGCCCCACGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309879.9
CDS CCA 72 bp CCTCAGGGTTCGCACTCTCCTGGGCGTTCTTGTCCTTaGGGTCTTCAAAGCCCATCCGCTTCATCTCCTTGG +
Preference number: 6 (lower is better)
Translates to: PQGSHSPGRSCP*GLQSPSASSPW
Trigger: CCAAGGAGATGAAGCGGATGGGCTTTGAAGACCCCAAGGACAAGAACGCCCAGGAGAGTGCGAACCCTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309879.9
ENST00000462833.6
ENST00000466617.5
ENST00000491190.5
CDS CAA 72 bp GAGATGATGATGGGCGTCACCACCTTCAATGCCACCTaGGTTGCATGCTCAGGGCACTGGGAGGTCCCGTTG +
Preference number: 6 (lower is better)
Translates to: EMMMGVTTFNAT*VACSGHWEVPL
Trigger: CAACGGGACCTCCCAGTGCCCTGAGCATGCAACCAAGGTGGCATTGAAGGTGGTGACGCCCATCATCATCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309879.9
ENST00000462833.6
CDS CAA 72 bp TGGTACAGCCGCTCCAGTTTGTCCGACGGGAACTTCTaGGAGCGGAATATCTGCAGCAACGCCAGGCAGCAG +
Preference number: 6 (lower is better)
Translates to: WYSRSSLSDGNF*ERNICSNARQQ
Trigger: CTGCTGCCTGGCGTTGCTGCAGATATTCCGCTCCAAGAAGTTCCCGTCGGACAAACTGGAGCGGCTGTACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS CAA 72 bp CGAGGAGCATCAACTCACCACTGGGAGGTCCCGTTGTaGAAGAAGTCTATGGCGTTGGCGGTGACCAGCAGG +
Preference number: 6 (lower is better)
Translates to: RGASTHHWEVPL*KKSMALAVTSR
Trigger: CCTGCTGGTCACCGCCAACGCCATAGACTTCTTCAACAACGGGACCTCCCAGTGGTGAGTTGATGCTCCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474577.5
CDS CAA 90 bp CAGGGGACAGGAATCAGCCACAGTCATCACATCTCTGGCTTGACCTaGCCACCATCTGTCTCCCCACATGCTGCAGGTCCTTCTGACTCC +
Preference number: 6 (lower is better)
Translates to: QGTGISHSHHISGLT*PPSVSPHAAGPSDS
Trigger: GGAGTCAGAAGGACCTGCAGCATGTGGGGAGACAGATGGTGGCAAGGTCAAGCCAGAGATGTGATGACTGTGGCTGATTCCTGTCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478092.1
CDS GCA 72 bp GGAACTTGCGGACGTGCTCAGACCGAAGCCTATCAATaGTCCTGGCGTCAATGGCACGGCCCAGAAACTCAT +
Preference number: 6 (lower is better)
Translates to: GTCGRAQTEAYQ*SWRQWHGPETH
Trigger: ATGAGTTTCTGGGCCGTGCCATTGACGCCAGGAGCATTGATAGGCTTCGGTCTGAGCACGTCCGCAAGTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309879.9
ENST00000462833.6
ENST00000466617.5
ENST00000491190.5
CDS GCA 72 bp GATGATGGGCGTCACCACCTTCAATGCCACCTTGGTTaGATGCTCAGGGCACTGGGAGGTCCCGTTGTTGAA +
Preference number: 6 (lower is better)
Translates to: DDGRHHLQCHLG*MLRALGGPVVE
Trigger: TTCAACAACGGGACCTCCCAGTGCCCTGAGCATGCAACCAAGGTGGCATTGAAGGTGGTGACGCCCATCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309879.9
ENST00000462833.6
CDS GCA 72 bp CTGTCAAATGCCTGTGAATGCAAGACACAAGGAGCCTaGACCTGTGTCCTCGACACCCCTCACCAGGAGTGC +
Preference number: 6 (lower is better)
Translates to: LSNACECKTQGA*TCVLDTPHQEC
Trigger: GCACTCCTGGTGAGGGGTGTCGAGGACACAGGTGCAGGCTCCTTGTGTCTTGCATTCACAGGCATTTGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478092.1
CDS CCA 72 bp GGGAGCGACCCTATCCGAGGAGCATCAACTCACCACTaGGAGGTCCCGTTGTTGAAGAAGTCTATGGCGTTG +
Preference number: 6 (lower is better)
Translates to: GSDPIRGASTHH*EVPLLKKSMAL
Trigger: CAACGCCATAGACTTCTTCAACAACGGGACCTCCCAGTGGTGAGTTGATGCTCCTCGGATAGGGTCGCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474577.5
CDS CAA 72 bp TCCTCAGGGTTCGCACTCTCCTGGGCGTTCTTGTCCTaGGGGTCTTCAAAGCCCATCCGCTTCATCTCCTTG +
Preference number: 6 (lower is better)
Translates to: SSGFALSWAFLS*GSSKPIRFISL
Trigger: CAAGGAGATGAAGCGGATGGGCTTTGAAGACCCCAAGGACAAGAACGCCCAGGAGAGTGCGAACCCTGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309879.9
ENST00000462833.6
ENST00000466617.5
ENST00000491190.5
CDS CAA 72 bp ATCCGAGGAGCATCAACTCACCACTGGGAGGTCCCGTaGTTGAAGAAGTCTATGGCGTTGGCGGTGACCAGC +
Preference number: 6 (lower is better)
Translates to: IRGASTHHWEVP*LKKSMALAVTS
Trigger: GCTGGTCACCGCCAACGCCATAGACTTCTTCAACAACGGGACCTCCCAGTGGTGAGTTGATGCTCCTCGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474577.5
CDS TCA 72 bp GGGTGCAGACACCCACGATGTTGGTGCAGGAGAAAATaGGAACATTGGAGACAAGCCTCCGTGGGGCCCATT +
Preference number: 6 (lower is better)
Translates to: GCRHPRCWCRRK*EHWRQASVGPI
Trigger: AATGGGCCCCACGGAGGCTTGTCTCCAATGTTCTCATTTTCTCCTGCACCAACATCGTGGGTGTCTGCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309879.9
CDS TCA 72 bp CCTGCTTGGAGTACTTCTTCTCTAAGTCAGGCTCCCTaGAGGTCAGGAGGAACTTGCGGACGTGCTCAGACC +
Preference number: 6 (lower is better)
Translates to: PAWSTSSLSQAP*RSGGTCGRAQT
Trigger: GGTCTGAGCACGTCCGCAAGTTCCTCCTGACCTTCAGGGAGCCTGACTTAGAGAAGAAGTACTCCAAGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309879.9
ENST00000462833.6
ENST00000466617.5
ENST00000491190.5
CDS TCA 72 bp TGCCCTTGGAAAGCGGGCTCCTGGTTCTCAGGCCTCTaGCTTAGGCTGGGACTTACAACATTGTCTCTCCTG +
Preference number: 6 (lower is better)
Translates to: CPWKAGSWFSGL*LRLGLTTLSLL
Trigger: CAGGAGAGACAATGTTGTAAGTCCCAGCCTAAGTCAGAGGCCTGAGAACCAGGAGCCCGCTTTCCAAGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470367.1
ENST00000491190.5
CDS TCA 72 bp GGGTGCAGACACCCACGATGTTGGTGCAGGAGAAAATaGGAACATTGGAGACAAGCCTGGGGACAGGTCTCC +
Preference number: 6 (lower is better)
Translates to: GCRHPRCWCRRK*EHWRQAWGQVS
Trigger: GGAGACCTGTCCCCAGGCTTGTCTCCAATGTTCTCATTTTCTCCTGCACCAACATCGTGGGTGTCTGCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483566.1
CDS GCA 72 bp CAAGGCTGTGCTAAACCCTGCAGCCTCCCGCTACCCTaGTCCTGTCAAATGCCTGTGAATGCAAGACACAAG +
Preference number: 6 (lower is better)
Translates to: QGCAKPCSLPLP*SCQMPVNARHK
Trigger: CTTGTGTCTTGCATTCACAGGCATTTGACAGGAGCAGGGTAGCGGGAGGCTGCAGGGTTTAGCACAGCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478092.1
CDS GCA 72 bp GATGATGGGCGTCACCACCTTCAATGCCACCTTGGTTaGATGCTCAGGGCTTTGTTCCTTGACTCCAGAGGG +
Preference number: 6 (lower is better)
Translates to: DDGRHHLQCHLG*MLRALFLDSRG
Trigger: CCCTCTGGAGTCAAGGAACAAAGCCCTGAGCATGCAACCAAGGTGGCATTGAAGGTGGTGACGCCCATCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491190.5
CDS CCA 72 bp TGGAGTTGGTTCTCTGGCGGTTCATCTTGGCGATCATaGCCTTCTCTTCTTTCCGCTTCTGGGTGCAGCGCA +
Preference number: 6 (lower is better)
Translates to: WSWFSGGSSWRS*PSLLSASGCSA
Trigger: TGCGCTGCACCCAGAAGCGGAAAGAAGAGAAGGCCATGATCGCCAAGATGAACCGCCAGAGAACCAACTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309879.9
ENST00000462833.6
ENST00000466617.5
ENST00000491190.5
CDS CAA 72 bp GGAATCAGCCACAGTCATCACATCTCTGGCTTGACCTaGCCACCATCTGTCTCCCCACATGCTGCAGGTCCT +
Preference number: 6 (lower is better)
Translates to: GISHSHHISGLT*PPSVSPHAAGP
Trigger: AGGACCTGCAGCATGTGGGGAGACAGATGGTGGCAAGGTCAAGCCAGAGATGTGATGACTGTGGCTGATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478092.1
CDS CAA 72 bp GGGACAGGAATCAGCCACAGTCATCACATCTCTGGCTaGACCTTGCCACCATCTGTCTCCCCACATGCTGCA +
Preference number: 6 (lower is better)
Translates to: GTGISHSHHISG*TLPPSVSPHAA
Trigger: TGCAGCATGTGGGGAGACAGATGGTGGCAAGGTCAAGCCAGAGATGTGATGACTGTGGCTGATTCCTGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478092.1
CDS TCA 72 bp TTGTCTCTCCTGGGTTTCAGGCCTTCAGGCTTGGACTaGAACCACGTCACTGGCTTTTCTGGTCCTCCAGCT +
Preference number: 6 (lower is better)
Translates to: LSLLGFRPSGLD*NHVTGFSGPPA
Trigger: AGCTGGAGGACCAGAAAAGCCAGTGACGTGGTTTCAGTCCAAGCCTGAAGGCCTGAAACCCAGGAGAGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470367.1
ENST00000491190.5
CDS GCA 72 bp CTCCAGGACCTGTCTGAATGGACAGGTCACCTCTGCTaGAACAGCCCTCTTTCTGAGACTTCATTCCTCAGG +
Preference number: 6 (lower is better)
Translates to: LQDLSEWTGHLC*NSPLSETSFLR
Trigger: CCTGAGGAATGAAGTCTCAGAAAGAGGGCTGTTGCAGCAGAGGTGACCTGTCCATTCAGACAGGTCCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309879.9
CDS GCA 72 bp CTCCTCCAGGACCTGTCTGAATGGACAGGTCACCTCTaGTGCAACAGCCCTCTTTCTGAGACTTCATTCCTC +
Preference number: 6 (lower is better)
Translates to: LLQDLSEWTGHL*CNSPLSETSFL
Trigger: GAGGAATGAAGTCTCAGAAAGAGGGCTGTTGCAGCAGAGGTGACCTGTCCATTCAGACAGGTCCTGGAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309879.9
CDS GCA 72 bp TTGGCTAGCGTGACATCGTTAGACCAGACGTCGAACTaGCACTTCCTGAGACCAAGGACACCGCAGTGTACT +
Preference number: 6 (lower is better)
Translates to: LASVTSLDQTSN*HFLRPRTPQCT
Trigger: AGTACACTGCGGTGTCCTTGGTCTCAGGAAGTGGCAGTTCGACGTCTGGTCTAACGATGTCACGCTAGCCAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309879.9
ENST00000462833.6
ENST00000466617.5
ENST00000491190.5
CDS CAA 72 bp TTGTGCCCGATGGAGTTGGTTCTCTGGCGGTTCATCTaGGCGATCATGGCCTTCTCTTCTTTCCGCTTCTGG +
Preference number: 6 (lower is better)
Translates to: LCPMELVLWRFI*AIMAFSSFRFW
Trigger: CCAGAAGCGGAAAGAAGAGAAGGCCATGATCGCCAAGATGAACCGCCAGAGAACCAACTCCATCGGGCACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309879.9
ENST00000462833.6
ENST00000466617.5
ENST00000491190.5
CDS CCA 72 bp CTGAGCATGAATATGGAGTGGGGCACGATGGTGATCTaGACAAAGCAGATGAAGAGGAAGACGAGCGAGGCA +
Preference number: 6 (lower is better)
Translates to: LSMNMEWGTMVI*TKQMKRKTSEA
Trigger: TGCCTCGCTCGTCTTCCTCTTCATCTGCTTTGTCCAGATCACCATCGTGCCCCACTCCATATTCATGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309879.9
ENST00000462833.6
ENST00000466617.5
ENST00000468683.1
ENST00000491190.5
CDS CCA 72 bp CAACATTGTCTCTCCTGGGTTTCAGGCCTTCAGGCTTaGACTGAAACCACGTCACTGGCTTTTCTGGTCCTC +
Preference number: 6 (lower is better)
Translates to: QHCLSWVSGLQA*TETTSLAFLVL
Trigger: GAGGACCAGAAAAGCCAGTGACGTGGTTTCAGTCCAAGCCTGAAGGCCTGAAACCCAGGAGAGACAATGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470367.1
ENST00000491190.5
CDS CAA 72 bp GAGATGATGATGGGCGTCACCACCTTCAATGCCACCTaGGTTGCATGCTCAGGGCTTTGTTCCTTGACTCCA +
Preference number: 6 (lower is better)
Translates to: EMMMGVTTFNAT*VACSGLCSLTP
Trigger: TGGAGTCAAGGAACAAAGCCCTGAGCATGCAACCAAGGTGGCATTGAAGGTGGTGACGCCCATCATCATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491190.5
CDS TCA 72 bp ATGGACAGGTCACCTCTGCTGCAACAGCCCTCTTTCTaGGACTTCATTCCTCAGGACTTACTTCCAGACGCT +
Preference number: 6 (lower is better)
Translates to: MDRSPLLQQPSF*DFIPQDLLPDA
Trigger: AGCGTCTGGAAGTAAGTCCTGAGGAATGAAGTCTCAGAAAGAGGGCTGTTGCAGCAGAGGTGACCTGTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309879.9
CDS TCA 72 bp GGGTGCAGACACCCACGATGTTGGTGCAGGAGAAAATaGGAACATTGGAGACAAGCTTCTCACTGCTCCATC +
Preference number: 6 (lower is better)
Translates to: GCRHPRCWCRRK*EHWRQASHCSI
Trigger: GATGGAGCAGTGAGAAGCTTGTCTCCAATGTTCTCATTTTCTCCTGCACCAACATCGTGGGTGTCTGCACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466617.5
CDS TCA 72 bp GGGTGCAGACACCCACGATGTTGGTGCAGGAGAAAATaGGAACATTGGAGACAAGCTGCTTCAGCAGGAACT +
Preference number: 6 (lower is better)
Translates to: GCRHPRCWCRRK*EHWRQAASAGT
Trigger: AGTTCCTGCTGAAGCAGCTTGTCTCCAATGTTCTCATTTTCTCCTGCACCAACATCGTGGGTGTCTGCACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462833.6
CDS CAA 90 bp TGGGTGCAGACACCCACGATGTTGGTGCAGGAGAAAATGAGAACATaGGAGACAAGCAAATTCAGGTGGGCGTTATCAAATCCACTGAAG +
Preference number: 6 (lower is better)
Translates to: WVQTPTMLVQEKMRT*ETSKFRWALSNPLK
Trigger: CTTCAGTGGATTTGATAACGCCCACCTGAATTTGCTTGTCTCCAATGTTCTCATTTTCTCCTGCACCAACATCGTGGGTGTCTGCACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470367.1