RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADCY4 (Homo sapiens)

Ensembl gene IDs: ENSG00000129467

Ensembl transcript IDs: ENST00000310677.8, ENST00000418030.7, ENST00000545213.5, ENST00000554068.6, ENST00000554577.5, ENST00000554674.1, ENST00000554781.5, ENST00000554936.1, ENST00000554959.1, ENST00000555684.2, ENST00000556932.1, ENST00000557056.5, ENST00000557099.2, ENST00000558125.1, ENST00000558563.5, ENST00000559167.5, ENST00000560635.1, ENST00000561138.1, ENST00000561200.1, ENST00000642306.1, ENST00000642397.1, ENST00000642645.1, ENST00000643111.1, ENST00000643432.1, ENST00000643450.1, ENST00000644086.1, ENST00000644130.1, ENST00000644564.1, ENST00000644961.1, ENST00000645545.1, ENST00000645771.1, ENST00000645859.1, ENST00000645938.1, ENST00000646337.1, ENST00000646612.1, ENST00000646631.1, ENST00000646791.1, ENST00000646977.1

Found 1140 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

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Type Sensor Details
3UTR TCA 90 bp GCACTCCGGGCCTGGAGTCCAAGGGGCCCAGATAGAGGCGGACGATaGGGCATTCCGACAGCCAGGCATGGGAGTGCAGGAAGAGGGAGC +
Preference number: 1 (lower is better)
Translates to: ALRAWSPRGPDRGGR*GIPTARHGSAGRGS
Trigger: GCTCCCTCTTCCTGCACTCCCATGCCTGGCTGTCGGAATGCCTCATCGTCCGCCTCTATCTGGGCCCCTTGGACTCCAGGCCCGGAGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
3UTR CCA 90 bp TCCCTGCCCCCATGTAGGCCTCCGCTTCCCTCCCACTTTGCCCTGTaGGTGATTCAGGTCGGTGAGGCCAGGACAGCTCTGCTGTATCCC +
Preference number: 1 (lower is better)
Translates to: SLPPCRPPLPSHFAL*VIQVGEARTALLYP
Trigger: GGGATACAGCAGAGCTGTCCTGGCCTCACCGACCTGAATCACCCACAGGGCAAAGTGGGAGGGAAGCGGAGGCCTACATGGGGGCAGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
3UTR TCA 90 bp GCCTCCGCTTCCCTCCCACTTTGCCCTGTGGGTGATTCAGGTCGGTaGGGCCAGGACAGCTCTGCTGTATCCCATCTCACCCCATCCCAG +
Preference number: 1 (lower is better)
Translates to: ASASLPLCPVGDSGR*GQDSSAVSHLTPSQ
Trigger: CTGGGATGGGGTGAGATGGGATACAGCAGAGCTGTCCTGGCCTCACCGACCTGAATCACCCACAGGGCAAAGTGGGAGGGAAGCGGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
3UTR TCA 90 bp TGCCCCCATGTAGGCCTCCGCTTCCCTCCCACTTTGCCCTGTGGGTaGTTCAGGTCGGTGAGGCCAGGACAGCTCTGCTGTATCCCATCT +
Preference number: 1 (lower is better)
Translates to: CPHVGLRFPPTLPCG*FRSVRPGQLCCIPS
Trigger: AGATGGGATACAGCAGAGCTGTCCTGGCCTCACCGACCTGAATCACCCACAGGGCAAAGTGGGAGGGAAGCGGAGGCCTACATGGGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
3UTR CCA 90 bp AGCTTAGACCCCAGGGCCACGGCAAATTCCACCATAGTGCCAAGGTaGCTGCAGCTCCGTTCAGCATCCTGTTGTGCATCCTGTCCAGAG +
Preference number: 1 (lower is better)
Translates to: SLDPRATANSTIVPR*LQLRSASCCASCPE
Trigger: CTCTGGACAGGATGCACAACAGGATGCTGAACGGAGCTGCAGCCACCTTGGCACTATGGTGGAATTTGCCGTGGCCCTGGGGTCTAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR CCA 90 bp GGAAGGGTGTGCAGAAGGAGATTAAGGGCATGTGGGAACACTCACTaGGACACTGATGAGAGGCAGAGACCCAGGGAGCTCCCAGGAGAG +
Preference number: 1 (lower is better)
Translates to: GRVCRRRLRACGNTH*DTDERQRPRELPGE
Trigger: CTCTCCTGGGAGCTCCCTGGGTCTCTGCCTCTCATCAGTGTCCCAGTGAGTGTTCCCACATGCCCTTAATCTCCTTCTGCACACCCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
3UTR CCA 90 bp TTCGACTGCTTCCACTGTTTCTGCGAGTTGAGCTGCTCAATGACCTaGAAGAACTTGGCATCCCCGGTGTCCAGTTCATCATCTAGTCCC +
Preference number: 1 (lower is better)
Translates to: FDCFHCFCELSCSMT*KNLASPVSSSSSSP
Trigger: GGGACTAGATGATGAACTGGACACCGGGGATGCCAAGTTCTTCCAGGTCATTGAGCAGCTCAACTCGCAGAAACAGTGGAAGCAGTCGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR TCA 90 bp ATCTGGGAGACAGGGGGCATCATACACACTGATACACACTGGGTGTaGCTTATGTCTGTTCTAATCCACAGAATGGAGCGTTCCTCCACT +
Preference number: 1 (lower is better)
Translates to: IWETGGIIHTDTHWV*LMSVLIHRMERSST
Trigger: AGTGGAGGAACGCTCCATTCTGTGGATTAGAACAGACATAAGTCACACCCAGTGTGTATCAGTGTGTATGATGCCCCCTGTCTCCCAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
3UTR CCA 90 bp TCGGTACTCTTTCTCCATCTCCTTCTCTCTGAAGTACAGTGTCAGTaGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCGAGTTGAG +
Preference number: 1 (lower is better)
Translates to: SVLFLHLLLSEVQCQ*VEVLRLLPLFLRVE
Trigger: CTCAACTCGCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACTGACACTGTACTTCAGAGAGAAGGAGATGGAGAAAGAGTACCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR CCA 90 bp AGAGAGACTATCCTTGAAATTAGATTCAGACTAGGGATAGAGAATTaGCAGCAGACTTTTTCTAAAGCATGGGCTTTCCCAGATAGGGGT +
Preference number: 1 (lower is better)
Translates to: RETILEIRFRLGIEN*QQTFSKAWAFPDRG
Trigger: ACCCCTATCTGGGAAAGCCCATGCTTTAGAAAAAGTCTGCTGCCAATTCTCTATCCCTAGTCTGAATCTAATTTCAAGGATAGTCTCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
3UTR-3UTR TCA 90 bp GTCCAAGGGGCCCAGATAGAGGCGGACGATGAGGCATTCCGACAGCCAGGCATGGATAGAGGCGGACGATaGGGCATTCCGACAGCCAGG +
Preference number: 2 (lower is better)
Translates to: VQGAQIEADDEAFRQPGMDRGGR*GIPTAR
Trigger: CCTGGCTGTCGGAATGCCTCATCGTCCGCCTCTATC...CATGCCTGGCTGTCGGAATGCCTCATCGTCCGCCTCTATCTGGGCCCCTTGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CCA 90 bp GGTGCCCAAGGCTATTCTCAGTCCTGGTCGTGTGGCCACCAGGCCAGACAGTGCTCAGTCCTGGTCGTGTaGCCACCAGGCCAGACAGTG +
Preference number: 2 (lower is better)
Translates to: GAQGYSQSWSCGHQARQCSVLVV*PPGQTV
Trigger: CACTGTCTGGCCTGGTGGCCACACGACCAGGACTGA...GCACTGTCTGGCCTGGTGGCCACACGACCAGGACTGAGAATAGCCTTGGGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CCA 90 bp CTTCAGCACTCCGGGCCTGAAGGGGCCATGGATCAGGGTGACCCCTTGCTTTCCGATGTGCACTCGCCCTaGTACACCGCCTGCCTCCAT +
Preference number: 2 (lower is better)
Translates to: LQHSGPEGAMDQGDPLLSDVHSP*YTACLH
Trigger: ATGGAGGCAGGCGGTGTACCAGGGCGAGTGCACATC...GGAAAGCAAGGGGTCACCCTGATCCATGGCCCCTTCAGGCCCGGAGTGCTGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
3UTR-3UTR TCA 90 bp GTCCAAGGGGCCCAGATAGAGGCGGACGATGAGGCATTCCGACAGCCAGGCATGGTGATGGACGCATCTTaGGGCCCTCAAGCGAGGACA +
Preference number: 2 (lower is better)
Translates to: VQGAQIEADDEAFRQPGMVMDAS*GPQART
Trigger: TGTCCTCGCTTGAGGGCCTCAAGATGCGTCCATCAC...CATGCCTGGCTGTCGGAATGCCTCATCGTCCGCCTCTATCTGGGCCCCTTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR GCA 90 bp AATGGAGCGTTCCTCCACTCAGGGGGCTGTGGGCTTGGGCTGAGGAAGGGTGTGAGTGCAGGCAGCCAGTaGAGCATCTTGGGGCCTTTC +
Preference number: 2 (lower is better)
Translates to: NGAFLHSGGCGLGLRKGVSAGSQ*SILGPF
Trigger: GAAAGGCCCCAAGATGCTGCACTGGCTGCCTGCACT...CACACCCTTCCTCAGCCCAAGCCCACAGCCCCCTGAGTGGAGGAACGCTCCATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
3UTR-3UTR GCA 90 bp CTTCAGCACTCCGGGCCTGAAGGGGCCATGGATCAGGGTGACCCCTTGCTTTCCAGGCCAGGACAGCTCTaGTGTATCCCATCTCACCCC +
Preference number: 2 (lower is better)
Translates to: LQHSGPEGAMDQGDPLLSRPGQL*CIPSHP
Trigger: GGGGTGAGATGGGATACAGCAGAGCTGTCCTGGCCT...GGAAAGCAAGGGGTCACCCTGATCCATGGCCCCTTCAGGCCCGGAGTGCTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
3UTR-3UTR CCA 90 bp CCTTCTCCCTGCCCCCATGTAGGCCTCCGCTTCCCTCCCACTTTGCCCTGTGGGCATCCTGTCCAGAGGTaGCATTTAAGCCTGTGGCTG +
Preference number: 2 (lower is better)
Translates to: PSPCPHVGLRFPPTLPCGHPVQR*HLSLWL
Trigger: CAGCCACAGGCTTAAATGCCACCTCTGGACAGGATG...CCCACAGGGCAAAGTGGGAGGGAAGCGGAGGCCTACATGGGGGCAGGGAGAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
3UTR-3UTR CCA 90 bp GAGCAGCAGCAGCTTCAGCTCGAAGCTCATGTGCAGAAAGAGGGAGCAGGAGAGCCACTCAGGGGGCTGTaGGCTTGGGCTGAGGAAGGG +
Preference number: 2 (lower is better)
Translates to: EQQQLQLEAHVQKEGAGEPLRGL*AWAEEG
Trigger: CCCTTCCTCAGCCCAAGCCCACAGCCCCCTGAGTGG...CTCTCCTGCTCCCTCTTTCTGCACATGAGCTTCGAGCTGAAGCTGCTGCTGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
3UTR-3UTR TCA 90 bp CCCAGGGCCACGGCAAATTCCACCATAGTGCCAAGGTGGCTGCAGCTCCGTTCAACGGGTCATCAGCAGTaGTGGACGCATCTTGAGGCC +
Preference number: 2 (lower is better)
Translates to: PRATANSTIVPRWLQLRSTGHQQ*WTHLEA
Trigger: GGCCTCAAGATGCGTCCATCACTGCTGATGACCCGT...TGAACGGAGCTGCAGCCACCTTGGCACTATGGTGGAATTTGCCGTGGCCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR GCA 90 bp CGCATCTTGAGGCCCTCAAGCGAGGACAGCAAGCCTCCTGCAGTGCCCTTCTCACTCATCCTCCTCCTCTaGCCGTGGATCGATGACCAG +
Preference number: 2 (lower is better)
Translates to: RILRPSSEDSKPPAVPFSLILLL*PWIDDQ
Trigger: CTGGTCATCGATCCACGGGCAGAGGAGGAGGATGAG...TGAGAAGGGCACTGCAGGAGGCTTGCTGTCCTCGCTTGAGGGCCTCAAGATGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CCA 90 bp GAGGAGGAAGAGGAGGAAGGTGATGCTATACGTGATGGCCAGAGCTGGGGGCCTACAGGGCTGTCTCCGTaGCTCAGGTGGGCAAAAGGC +
Preference number: 2 (lower is better)
Translates to: EEEEEEGDAIRDGQSWGPTGLSP*LRWAKG
Trigger: GCCTTTTGCCCACCTGAGCCACGGAGACAGCCCTGT...AGGCCCCCAGCTCTGGCCATCACGTATAGCATCACCTTCCTCCTCTTCCTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CCA 90 bp CCAATAACTCCAGCTACTACGGGTCCATGGTTCAACCCCACTCGCAGGCGGAAGGGAGAGGGGTGGAGGTaGACACAGGGCTGTCTCCGT +
Preference number: 2 (lower is better)
Translates to: PITPATTGPWFNPTRRRKGEGWR*TQGCLR
Trigger: ACGGAGACAGCCCTGTGTCCACCTCCACCCCTCTCC...CTTCCGCCTGCGAGTGGGGTTGAACCATGGACCCGTAGTAGCTGGAGTTATTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CCA 90 bp GAGCAGCAGCAGCTTCAGCTCGAAGCTCATGTGCAGAAAGAGGGAGCAGGAGAGGGAGAGGGGTGGAGGTaGACACAGGGCTGTCTCCGT +
Preference number: 2 (lower is better)
Translates to: EQQQLQLEAHVQKEGAGEGEGWR*TQGCLR
Trigger: ACGGAGACAGCCCTGTGTCCACCTCCACCCCTCTCC...CTCTCCTGCTCCCTCTTTCTGCACATGAGCTTCGAGCTGAAGCTGCTGCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CCA 90 bp AATGGAGCGTTCCTCCACTCAGGGGGCTGTGGGCTTGGGCTGAGGAAGGGTGTGAGACAAGGAGGATGGTaGCGGTGCCCAAGGCTATTC +
Preference number: 2 (lower is better)
Translates to: NGAFLHSGGCGLGLRKGVRQGGW*RCPRLF
Trigger: GAATAGCCTTGGGCACCGCCACCATCCTCCTTGTCT...CACACCCTTCCTCAGCCCAAGCCCACAGCCCCCTGAGTGGAGGAACGCTCCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
3UTR-3UTR CCA 90 bp CCTTCTCCCTGCCCCCATGTAGGCCTCCGCTTCCCTCCCACTTTGCCCTGTGGGGCTCCCAGGAGAGGTTaGAAATCATGGAGGACACAT +
Preference number: 2 (lower is better)
Translates to: PSPCPHVGLRFPPTLPCGAPRRG*KSWRTH
Trigger: ATGTGTCCTCCATGATTTCCAACCTCTCCTGGGAGC...CCCACAGGGCAAAGTGGGAGGGAAGCGGAGGCCTACATGGGGGCAGGGAGAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
3UTR-3UTR TCA 90 bp AGGAAGCCCAGCGTGCAGCAGTGCATGGAGTACTGTGGGGCCAGGCAGGGGTCACCATCTCCTTCTCTCTaGAGTACAGTGTCAGTGGGT +
Preference number: 2 (lower is better)
Translates to: RKPSVQQCMEYCGARQGSPSPSL*STVSVG
Trigger: ACCCACTGACACTGTACTTCAGAGAGAAGGAGATGG...TGACCCCTGCCTGGCCCCACAGTACTCCATGCACTGCTGCACGCTGGGCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
3UTR-3UTR TCA 90 bp GGGCTCCTTCAGCACTCCGGGCCTGAAGGGGCCATGGATCAGGGTGACCCCTTGCCTCATCAGGTCCTCTaGGAAGCAGACAAAAAGGAT +
Preference number: 2 (lower is better)
Translates to: GLLQHSGPEGAMDQGDPLPHQVL*EADKKD
Trigger: ATCCTTTTTGTCTGCTTCTCAGAGGACCTGATGAGG...CAAGGGGTCACCCTGATCCATGGCCCCTTCAGGCCCGGAGTGCTGAAGGAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
3UTR-3UTR TCA 90 bp CTTCAGCACTCCGGGCCTGAAGGGGCCATGGATCAGGGTGACCCCTTGCTTTCCCAGAGTAGAACTCCTTaGAGTCTGGGACTGAGGCGA +
Preference number: 2 (lower is better)
Translates to: LQHSGPEGAMDQGDPLLSQSRTP*SLGLRR
Trigger: TCGCCTCAGTCCCAGACTTCAAGGAGTTCTACTCTG...GGAAAGCAAGGGGTCACCCTGATCCATGGCCCCTTCAGGCCCGGAGTGCTGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
3UTR-3UTR GCA 90 bp CCTTCTCCCTGCCCCCATGTAGGCCTCCGCTTCCCTCCCACTTTGCCCTGTGGGTGCTTCCACTGTTTCTaGGAGTTGAGCTGCTCAATG +
Preference number: 2 (lower is better)
Translates to: PSPCPHVGLRFPPTLPCGCFHCF*ELSCSM
Trigger: CATTGAGCAGCTCAACTCGCAGAAACAGTGGAAGCA...CCCACAGGGCAAAGTGGGAGGGAAGCGGAGGCCTACATGGGGGCAGGGAGAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
3UTR-3UTR GCA 90 bp CCTTCTCCCTGCCCCCATGTAGGCCTCCGCTTCCCTCCCACTTTGCCCTGTGGGTTGAAGTCCTTCGACTaGTTCCACTGTTTCTGCGAG +
Preference number: 2 (lower is better)
Translates to: PSPCPHVGLRFPPTLPCGLKSFD*FHCFCE
Trigger: CTCGCAGAAACAGTGGAAGCAGTCGAAGGACTTCAA...CCCACAGGGCAAAGTGGGAGGGAAGCGGAGGCCTACATGGGGGCAGGGAGAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
3UTR-3UTR CCA 90 bp CCAATAACTCCAGCTACTACGGGTCCATGGTTCAACCCCACTCGCAGGCGGAAGACAGGGCTGTCTCCGTaGCTCAGGTGGGCAAAAGGC +
Preference number: 2 (lower is better)
Translates to: PITPATTGPWFNPTRRRKTGLSP*LRWAKG
Trigger: GCCTTTTGCCCACCTGAGCCACGGAGACAGCCCTGT...CTTCCGCCTGCGAGTGGGGTTGAACCATGGACCCGTAGTAGCTGGAGTTATTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CCA 90 bp CCTTCTCCCTGCCCCCATGTAGGCCTCCGCTTCCCTCCCACTTTGCCCTGTGGGGAAGTACAGTGTCAGTaGGTTGAAGTCCTTCGACTG +
Preference number: 2 (lower is better)
Translates to: PSPCPHVGLRFPPTLPCGEVQCQ*VEVLRL
Trigger: CAGTCGAAGGACTTCAACCCACTGACACTGTACTTC...CCCACAGGGCAAAGTGGGAGGGAAGCGGAGGCCTACATGGGGGCAGGGAGAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
3UTR-3UTR CCA 90 bp GAGGAGGAAGAGGAGGAAGGTGATGCTATACGTGATGGCCAGAGCTGGGGGCCTGCCAGTGCAGCATCTTaGGGCCTTTCAGGACACACC +
Preference number: 2 (lower is better)
Translates to: EEEEEEGDAIRDGQSWGPASAAS*GLSGHT
Trigger: GGTGTGTCCTGAAAGGCCCCAAGATGCTGCACTGGC...AGGCCCCCAGCTCTGGCCATCACGTATAGCATCACCTTCCTCCTCTTCCTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CCA 90 bp GGGCTCCTTCAGCACTCCGGGCCTGAAGGGGCCATGGATCAGGGTGACCCCTTGGACACATTGGGAGCTTaGAAAGGGCAGTCTGATGAT +
Preference number: 2 (lower is better)
Translates to: GLLQHSGPEGAMDQGDPLDTLGA*KGQSDD
Trigger: ATCATCAGACTGCCCTTTCCAAGCTCCCAATGTGTC...CAAGGGGTCACCCTGATCCATGGCCCCTTCAGGCCCGGAGTGCTGAAGGAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
3UTR-3UTR CCA 90 bp GAGCAGCAGCAGCTTCAGCTCGAAGCTCATGTGCAGAAAGAGGGAGCAGGAGAGGATGTGCACTCGCCCTaGTACACCGCCTGCCTCCAT +
Preference number: 2 (lower is better)
Translates to: EQQQLQLEAHVQKEGAGEDVHSP*YTACLH
Trigger: ATGGAGGCAGGCGGTGTACCAGGGCGAGTGCACATC...CTCTCCTGCTCCCTCTTTCTGCACATGAGCTTCGAGCTGAAGCTGCTGCTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
3UTR-3UTR TCA 90 bp GAAGTCCAGGCGGCAGTAGTACTCATTCTGGCGAGCCAGGACAAGGAGGGTGAAGTGATGGACGCATCTTaGGGCCCTCAAGCGAGGACA +
Preference number: 2 (lower is better)
Translates to: EVQAAVVLILASQDKEGEVMDAS*GPQART
Trigger: TGTCCTCGCTTGAGGGCCTCAAGATGCGTCCATCAC...TTCACCCTCCTTGTCCTGGCTCGCCAGAATGAGTACTACTGCCGCCTGGACTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
3UTR-3UTR GCA 90 bp GAGCAGCAGCAGCTTCAGCTCGAAGCTCATGTGCAGAAAGAGGGAGCAGGAGAGCTCATCCTCCTCCTCTaGCCGTGGATCGATGACCAG +
Preference number: 2 (lower is better)
Translates to: EQQQLQLEAHVQKEGAGELILLL*PWIDDQ
Trigger: CTGGTCATCGATCCACGGGCAGAGGAGGAGGATGAG...CTCTCCTGCTCCCTCTTTCTGCACATGAGCTTCGAGCTGAAGCTGCTGCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR GCA 90 bp CCAATAACTCCAGCTACTACGGGTCCATGGTTCAACCCCACTCGCAGGCGGAAGGGACAGCAAGCCTCCTaGAGTGCCCTTCTCATCCTC +
Preference number: 2 (lower is better)
Translates to: PITPATTGPWFNPTRRRKGQQAS*SALLIL
Trigger: GAGGATGAGAAGGGCACTGCAGGAGGCTTGCTGTCC...CTTCCGCCTGCGAGTGGGGTTGAACCATGGACCCGTAGTAGCTGGAGTTATTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR GCA 90 bp GAGCAGCAGCAGCTTCAGCTCGAAGCTCATGTGCAGAAAGAGGGAGCAGGAGAGAGTGCAGGCAGCCAGTaGAGCATCTTGGGGCCTTTC +
Preference number: 2 (lower is better)
Translates to: EQQQLQLEAHVQKEGAGESAGSQ*SILGPF
Trigger: GAAAGGCCCCAAGATGCTGCACTGGCTGCCTGCACT...CTCTCCTGCTCCCTCTTTCTGCACATGAGCTTCGAGCTGAAGCTGCTGCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR GCA 90 bp AGGAGCAGCAGCAGCTTCAGCTCGAAGCTCATGTGCAGAAAGAGGGAGCAGGAGGGAGGATGGTGGCGGTaGCCAAGGCTATTCTCAGTC +
Preference number: 2 (lower is better)
Translates to: RSSSSFSSKLMCRKREQEGGWWR*PRLFSV
Trigger: GACTGAGAATAGCCTTGGGCACCGCCACCATCCTCC...CTCCTGCTCCCTCTTTCTGCACATGAGCTTCGAGCTGAAGCTGCTGCTGCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR GCA 90 bp CCAATAACTCCAGCTACTACGGGTCCATGGTTCAACCCCACTCGCAGGCGGAAGAGGCCAGGACAGCTCTaGTGTATCCCATCTCACCCC +
Preference number: 2 (lower is better)
Translates to: PITPATTGPWFNPTRRRKRPGQL*CIPSHP
Trigger: GGGGTGAGATGGGATACAGCAGAGCTGTCCTGGCCT...CTTCCGCCTGCGAGTGGGGTTGAACCATGGACCCGTAGTAGCTGGAGTTATTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
3UTR-3UTR GCA 90 bp CCAATAACTCCAGCTACTACGGGTCCATGGTTCAACCCCACTCGCAGGCGGAAGATCAGGGTGACCCCTTaGTTTCCCCCTTCCTGGCCT +
Preference number: 2 (lower is better)
Translates to: PITPATTGPWFNPTRRRKIRVTP*FPPSWP
Trigger: AGGCCAGGAAGGGGGAAAGCAAGGGGTCACCCTGAT...CTTCCGCCTGCGAGTGGGGTTGAACCATGGACCCGTAGTAGCTGGAGTTATTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
3UTR-3UTR CCA 90 bp GAGGAGGAAGAGGAGGAAGGTGATGCTATACGTGATGGCCAGAGCTGGGGGCCTCTCCTCCTCTGCCCGTaGATCGATGACCAGATAGGT +
Preference number: 2 (lower is better)
Translates to: EEEEEEGDAIRDGQSWGPLLLCP*IDDQIG
Trigger: ACCTATCTGGTCATCGATCCACGGGCAGAGGAGGAG...AGGCCCCCAGCTCTGGCCATCACGTATAGCATCACCTTCCTCCTCTTCCTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CCA 90 bp GAAGATGAAGAAGGAGATAGCACCCATCAGTTTGGGCTCCTTCAGCACTCCGGGGGAGAGGGGTGGAGGTaGACACAGGGCTGTCTCCGT +
Preference number: 2 (lower is better)
Translates to: EDEEGDSTHQFGLLQHSGGEGWR*TQGCLR
Trigger: ACGGAGACAGCCCTGTGTCCACCTCCACCCCTCTCC...CCCGGAGTGCTGAAGGAGCCCAAACTGATGGGTGCTATCTCCTTCTTCATCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CCA 90 bp CCAATAACTCCAGCTACTACGGGTCCATGGTTCAACCCCACTCGCAGGCGGAAGGCCAGTGCAGCATCTTaGGGCCTTTCAGGACACACC +
Preference number: 2 (lower is better)
Translates to: PITPATTGPWFNPTRRRKASAAS*GLSGHT
Trigger: GGTGTGTCCTGAAAGGCCCCAAGATGCTGCACTGGC...CTTCCGCCTGCGAGTGGGGTTGAACCATGGACCCGTAGTAGCTGGAGTTATTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR CAA 90 bp GGGACACTGATGAGAGGCAGAGACCCAGGGAGCTCCCAGGAGAGGTaGGAAATCATGGAGGACACATTGGGAGCTTGGAAAGGGCAGTCT +
Preference number: 2 (lower is better)
Translates to: GTLMRGRDPGSSQER*EIMEDTLGAWKGQS
Trigger: AGACTGCCCTTTCCAAGCTCCCAATGTGTCCTCCATGATTTCCAACCTCTCCTGGGAGCTCCCTGGGTCTCTGCCTCTCATCAGTGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR TCA 90 bp CCAATAACTCCAGCTACTACGGGTCCATGGTTCAACCCCACTCGCAGGCGGAAGTCTTCTCCACCCCACTaGACTTGGGCTTGGAGAGCA +
Preference number: 2 (lower is better)
Translates to: PITPATTGPWFNPTRRRKSSPPH*TWAWRA
Trigger: TGCTCTCCAAGCCCAAGTTCAGTGGGGTGGAGAAGA...CTTCCGCCTGCGAGTGGGGTTGAACCATGGACCCGTAGTAGCTGGAGTTATTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR GCA 90 bp GTCCAAGGGGCCCAGATAGAGGCGGACGATGAGGCATTCCGACAGCCAGGCATGTGCTTCCACTGTTTCTaGGAGTTGAGCTGCTCAATG +
Preference number: 2 (lower is better)
Translates to: VQGAQIEADDEAFRQPGMCFHCF*ELSCSM
Trigger: CATTGAGCAGCTCAACTCGCAGAAACAGTGGAAGCA...CATGCCTGGCTGTCGGAATGCCTCATCGTCCGCCTCTATCTGGGCCCCTTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR GCA 90 bp AATGGAGCGTTCCTCCACTCAGGGGGCTGTGGGCTTGGGCTGAGGAAGGGTGTGTTGAAGTCCTTCGACTaGTTCCACTGTTTCTGCGAG +
Preference number: 2 (lower is better)
Translates to: NGAFLHSGGCGLGLRKGVLKSFD*FHCFCE
Trigger: CTCGCAGAAACAGTGGAAGCAGTCGAAGGACTTCAA...CACACCCTTCCTCAGCCCAAGCCCACAGCCCCCTGAGTGGAGGAACGCTCCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
3UTR-3UTR GCA 90 bp AATGGAGCGTTCCTCCACTCAGGGGGCTGTGGGCTTGGGCTGAGGAAGGGTGTGTTTGAAGGCGGGGATTaGAGAGAGTCGGTACTCTTT +
Preference number: 2 (lower is better)
Translates to: NGAFLHSGGCGLGLRKGVFEGGD*RESVLF
Trigger: AAAGAGTACCGACTCTCTGCAATCCCCGCCTTCAAA...CACACCCTTCCTCAGCCCAAGCCCACAGCCCCCTGAGTGGAGGAACGCTCCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
3UTR-3UTR GCA 90 bp TGGGAAGAAGAACAGGCTGGTAATGGCCATGGCAAAGACAAGGAGGATGGTGGCGTAGCCCCTGTGATGTaGACTCGCCCTGGTACACCG +
Preference number: 2 (lower is better)
Translates to: WEEEQAGNGHGKDKEDGGVAPVM*TRPGTP
Trigger: CGGTGTACCAGGGCGAGTGCACATCACAGGGGCTAC...GCCACCATCCTCCTTGTCTTTGCCATGGCCATTACCAGCCTGTTCTTCTTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
3UTR-3UTR GCA 90 bp GAAGATGAAGAAGGAGATAGCACCCATCAGTTTGGGCTCCTTCAGCACTCCGGGGGTCCCGATGCTCCATaGCTGCGTCCTCCACAGCAT +
Preference number: 2 (lower is better)
Translates to: EDEEGDSTHQFGLLQHSGGPDAP*LRPPQH
Trigger: ATGCTGTGGAGGACGCAGGCATGGAGCATCGGGACC...CCCGGAGTGCTGAAGGAGCCCAAACTGATGGGTGCTATCTCCTTCTTCATCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
3UTR-3UTR CCA 90 bp GAAGATGAAGAAGGAGATAGCACCCATCAGTTTGGGCTCCTTCAGCACTCCGGGTCTCCGTGGCTCAGGTaGGCAAAAGGCTTGGCTGCG +
Preference number: 2 (lower is better)
Translates to: EDEEGDSTHQFGLLQHSGSPWLR*AKGLAA
Trigger: CGCAGCCAAGCCTTTTGCCCACCTGAGCCACGGAGA...CCCGGAGTGCTGAAGGAGCCCAAACTGATGGGTGCTATCTCCTTCTTCATCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CCA 90 bp CAGCCTAGGGTAGCTGAAGGAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGTCTCCGTGGCTCAGGTaGGCAAAAGGCTTGGCTGCG +
Preference number: 2 (lower is better)
Translates to: QPRVAEGGPVRVKSVFRKSPWLR*AKGLAA
Trigger: CGCAGCCAAGCCTTTTGCCCACCTGAGCCACGGAGA...CTTCCTGAACACAGACTTGACACGAACTGGACCTCCTTCAGCTACCCTAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CCA 90 bp GAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGTAGGTGCAGAGCTGCCCTTACAGGGCTGTCTCCGTaGCTCAGGTGGGCAAAAGGC +
Preference number: 2 (lower is better)
Translates to: EVQFVSSLCSGSRCRAALTGLSP*LRWAKG
Trigger: GCCTTTTGCCCACCTGAGCCACGGAGACAGCCCTGT...AAGGGCAGCTCTGCACCTACTTCCTGAACACAGACTTGACACGAACTGGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CCA 90 bp GAAGATGAAGAAGGAGATAGCACCCATCAGTTTGGGCTCCTTCAGCACTCCGGGCGATCCAGGCTCCACTaGGTGCTGAAGGAAGCCAGG +
Preference number: 2 (lower is better)
Translates to: EDEEGDSTHQFGLLQHSGRSRLH*VLKEAR
Trigger: CCTGGCTTCCTTCAGCACCCAGTGGAGCCTGGATCG...CCCGGAGTGCTGAAGGAGCCCAAACTGATGGGTGCTATCTCCTTCTTCATCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CCA 90 bp TGGGAAGAAGAACAGGCTGGTAATGGCCATGGCAAAGACAAGGAGGATGGTGGCCGATCCAGGCTCCACTaGGTGCTGAAGGAAGCCAGG +
Preference number: 2 (lower is better)
Translates to: WEEEQAGNGHGKDKEDGGRSRLH*VLKEAR
Trigger: CCTGGCTTCCTTCAGCACCCAGTGGAGCCTGGATCG...GCCACCATCCTCCTTGTCTTTGCCATGGCCATTACCAGCCTGTTCTTCTTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CCA 90 bp GAAGATGAAGAAGGAGATAGCACCCATCAGTTTGGGCTCCTTCAGCACTCCGGGGGCTATTCTCAGTCCTaGTCGTGTGGCCACCAGGCC +
Preference number: 2 (lower is better)
Translates to: EDEEGDSTHQFGLLQHSGGYSQS*SCGHQA
Trigger: GGCCTGGTGGCCACACGACCAGGACTGAGAATAGCC...CCCGGAGTGCTGAAGGAGCCCAAACTGATGGGTGCTATCTCCTTCTTCATCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CCA 90 bp TGGGAAGAAGAACAGGCTGGTAATGGCCATGGCAAAGACAAGGAGGATGGTGGCGGCTATTCTCAGTCCTaGTCGTGTGGCCACCAGGCC +
Preference number: 2 (lower is better)
Translates to: WEEEQAGNGHGKDKEDGGGYSQS*SCGHQA
Trigger: GGCCTGGTGGCCACACGACCAGGACTGAGAATAGCC...GCCACCATCCTCCTTGTCTTTGCCATGGCCATTACCAGCCTGTTCTTCTTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CCA 90 bp GTCCAAGGGGCCCAGATAGAGGCGGACGATGAGGCATTCCGACAGCCAGGCATGGACACATTGGGAGCTTaGAAAGGGCAGTCTGATGAT +
Preference number: 2 (lower is better)
Translates to: VQGAQIEADDEAFRQPGMDTLGA*KGQSDD
Trigger: ATCATCAGACTGCCCTTTCCAAGCTCCCAATGTGTC...CATGCCTGGCTGTCGGAATGCCTCATCGTCCGCCTCTATCTGGGCCCCTTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CCA 90 bp CAGCCTAGGGTAGCTGAAGGAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGTCCGACAGCCAGGCATaGGAGTGCAGGAAGAGGGAG +
Preference number: 2 (lower is better)
Translates to: QPRVAEGGPVRVKSVFRKSDSQA*ECRKRE
Trigger: CTCCCTCTTCCTGCACTCCCATGCCTGGCTGTCGGA...CTTCCTGAACACAGACTTGACACGAACTGGACCTCCTTCAGCTACCCTAGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CCA 90 bp GAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGTAGGTGCAGAGCTGCCCTTTCCGACAGCCAGGCATaGGAGTGCAGGAAGAGGGAG +
Preference number: 2 (lower is better)
Translates to: EVQFVSSLCSGSRCRAALSDSQA*ECRKRE
Trigger: CTCCCTCTTCCTGCACTCCCATGCCTGGCTGTCGGA...AAGGGCAGCTCTGCACCTACTTCCTGAACACAGACTTGACACGAACTGGACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR GCA 90 bp TCCGTTCAGCATCCTGTTGTGCATCCTGTCCAGAGGTGGCATTTAAGCCTGTGGCTCATCCTCCTCCTCTaGCCGTGGATCGATGACCAG +
Preference number: 2 (lower is better)
Translates to: SVQHPVVHPVQRWHLSLWLILLL*PWIDDQ
Trigger: CTGGTCATCGATCCACGGGCAGAGGAGGAGGATGAG...CCACAGGCTTAAATGCCACCTCTGGACAGGATGCACAACAGGATGCTGAACGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR GCA 90 bp AAGGAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGTAGGTGCAGAGCTGCCCTCATCCTCCTCCTCTaGCCGTGGATCGATGACCAG +
Preference number: 2 (lower is better)
Translates to: KEVQFVSSLCSGSRCRAALILLL*PWIDDQ
Trigger: CTGGTCATCGATCCACGGGCAGAGGAGGAGGATGAG...GGCAGCTCTGCACCTACTTCCTGAACACAGACTTGACACGAACTGGACCTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR GCA 90 bp AAGGAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGTAGGTGCAGAGCTGCCAGTGCAGGCAGCCAGTaGAGCATCTTGGGGCCTTTC +
Preference number: 2 (lower is better)
Translates to: KEVQFVSSLCSGSRCRAASAGSQ*SILGPF
Trigger: GAAAGGCCCCAAGATGCTGCACTGGCTGCCTGCACT...GGCAGCTCTGCACCTACTTCCTGAACACAGACTTGACACGAACTGGACCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR GCA 90 bp GAAGATGAAGAAGGAGATAGCACCCATCAGTTTGGGCTCCTTCAGCACTCCGGGAGTGCAGGCAGCCAGTaGAGCATCTTGGGGCCTTTC +
Preference number: 2 (lower is better)
Translates to: EDEEGDSTHQFGLLQHSGSAGSQ*SILGPF
Trigger: GAAAGGCCCCAAGATGCTGCACTGGCTGCCTGCACT...CCCGGAGTGCTGAAGGAGCCCAAACTGATGGGTGCTATCTCCTTCTTCATCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR GCA 90 bp GAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGTAGGTGCAGAGCTGCCCTTGGAGGATGGTGGCGGTaGCCAAGGCTATTCTCAGTC +
Preference number: 2 (lower is better)
Translates to: EVQFVSSLCSGSRCRAALGGWWR*PRLFSV
Trigger: GACTGAGAATAGCCTTGGGCACCGCCACCATCCTCC...AAGGGCAGCTCTGCACCTACTTCCTGAACACAGACTTGACACGAACTGGACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR GCA 90 bp TCTTCTTCCACAGGAAGTCCAGGCGGCAGTAGTACTCATTCTGGCGAGCCAGGAAGAGGAAGCCCAGCGTaGAGCAGTGCATGGAGTATG +
Preference number: 2 (lower is better)
Translates to: SSSTGSPGGSSTHSGEPGRGSPA*SSAWSM
Trigger: CATACTCCATGCACTGCTGCACGCTGGGCTTCCTCT...TCCTGGCTCGCCAGAATGAGTACTACTGCCGCCTGGACTTCCTGTGGAAGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
3UTR-3UTR CCA 90 bp CCTTCTCCCTGCCCCCATGTAGGCCTCCGCTTCCCTCCCACTTTGCCCTGTGGGTTTGTCACTAGCATCTaGATGATGAAGTTGGAGAGA +
Preference number: 2 (lower is better)
Translates to: PSPCPHVGLRFPPTLPCGFVTSI*MMKLER
Trigger: TCTCTCCAACTTCATCATCCAGATGCTAGTGACAAA...CCCACAGGGCAAAGTGGGAGGGAAGCGGAGGCCTACATGGGGGCAGGGAGAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
3UTR-3UTR CCA 90 bp GAAGTCCAGGCGGCAGTAGTACTCATTCTGGCGAGCCAGGACAAGGAGGGTGAAGCAGTGCATGGAGTATaGGACACTGATGAGAGGCAG +
Preference number: 2 (lower is better)
Translates to: EVQAAVVLILASQDKEGEAVHGV*DTDERQ
Trigger: CTGCCTCTCATCAGTGTCCCATACTCCATGCACTGC...TTCACCCTCCTTGTCCTGGCTCGCCAGAATGAGTACTACTGCCGCCTGGACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
3UTR-3UTR CCA 90 bp CCAATAACTCCAGCTACTACGGGTCCATGGTTCAACCCCACTCGCAGGCGGAAGTGGCATTTAAGCCTGTaGCTGCCATGTAGGTGCTGC +
Preference number: 2 (lower is better)
Translates to: PITPATTGPWFNPTRRRKWHLSL*LPCRCC
Trigger: GCAGCACCTACATGGCAGCCACAGGCTTAAATGCCA...CTTCCGCCTGCGAGTGGGGTTGAACCATGGACCCGTAGTAGCTGGAGTTATTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CCA 90 bp CAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATCTCAGCCACTCAGGGGGCTGTaGGCTTGGGCTGAGGAAGGG +
Preference number: 2 (lower is better)
Translates to: QTPQSLFIEVLRRRVQSQPLRGL*AWAEEG
Trigger: CCCTTCCTCAGCCCAAGCCCACAGCCCCCTGAGTGG...CTGAGATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
3UTR-3UTR TCA 90 bp GAGGAGGAAGAGGAGGAAGGTGATGCTATACGTGATGGCCAGAGCTGGGGGCCTCCTCATCAGGTCCTCTaGGAAGCAGACAAAAAGGAT +
Preference number: 2 (lower is better)
Translates to: EEEEEEGDAIRDGQSWGPPHQVL*EADKKD
Trigger: ATCCTTTTTGTCTGCTTCTCAGAGGACCTGATGAGG...AGGCCCCCAGCTCTGGCCATCACGTATAGCATCACCTTCCTCCTCTTCCTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR TCA 90 bp CCCAGGGCCACGGCAAATTCCACCATAGTGCCAAGGTGGCTGCAGCTCCGTTCACTAGGCCCTCATGATTaGTGTTGGATTCAGAGTAGA +
Preference number: 2 (lower is better)
Translates to: PRATANSTIVPRWLQLRSLGPHD*CWIQSR
Trigger: TCTACTCTGAATCCAACATCAATCATGAGGGCCTAG...TGAACGGAGCTGCAGCCACCTTGGCACTATGGTGGAATTTGCCGTGGCCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR GCA 90 bp GAGGAGGAAGAGGAGGAAGGTGATGCTATACGTGATGGCCAGAGCTGGGGGCCTTTCTGCGAGTTGAGCTaGTCAATGACCTGGAAGAAC +
Preference number: 2 (lower is better)
Translates to: EEEEEEGDAIRDGQSWGPFCELS*SMTWKN
Trigger: GTTCTTCCAGGTCATTGAGCAGCTCAACTCGCAGAA...AGGCCCCCAGCTCTGGCCATCACGTATAGCATCACCTTCCTCCTCTTCCTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR GCA 90 bp TGGAGGACACATTGGGAGCTTGGAAAGGGCAGTCTGATGATGTTGGGAAGAAGACCCTGGTACACCGCCTaGCTCCATGTGGTTAGCCAG +
Preference number: 2 (lower is better)
Translates to: WRTHWELGKGSLMMLGRRPWYTA*LHVVSQ
Trigger: CTGGCTAACCACATGGAGGCAGGCGGTGTACCAGGG...TCTTCTTCCCAACATCATCAGACTGCCCTTTCCAAGCTCCCAATGTGTCCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
3UTR-3UTR CCA 90 bp CTGAAGTACAGTGTCAGTGGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCACAGGGCTGTCTCCGTaGCTCAGGTGGGCAAAAGGC +
Preference number: 2 (lower is better)
Translates to: LKYSVSGLKSFDCFHCFCTGLSP*LRWAKG
Trigger: GCCTTTTGCCCACCTGAGCCACGGAGACAGCCCTGT...GCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACTGACACTGTACTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CCA 90 bp GAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGTAGGTGCAGAGCTGCCCTTACCATAGTGCCAAGGTaGCTGCAGCTCCGTTCAGCA +
Preference number: 2 (lower is better)
Translates to: EVQFVSSLCSGSRCRAALTIVPR*LQLRSA
Trigger: TGCTGAACGGAGCTGCAGCCACCTTGGCACTATGGT...AAGGGCAGCTCTGCACCTACTTCCTGAACACAGACTTGACACGAACTGGACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CCA 90 bp CCAATAACTCCAGCTACTACGGGTCCATGGTTCAACCCCACTCGCAGGCGGAAGGAGATTAAGGGCATGTaGGAACACTCACTGGGACAC +
Preference number: 2 (lower is better)
Translates to: PITPATTGPWFNPTRRRKEIKGM*EHSLGH
Trigger: GTGTCCCAGTGAGTGTTCCCACATGCCCTTAATCTC...CTTCCGCCTGCGAGTGGGGTTGAACCATGGACCCGTAGTAGCTGGAGTTATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
3UTR-3UTR TCA 90 bp TGGAGGACACATTGGGAGCTTGGAAAGGGCAGTCTGATGATGTTGGGAAGAAGAACGGGTCATCAGCAGTaGTGGACGCATCTTGAGGCC +
Preference number: 2 (lower is better)
Translates to: WRTHWELGKGSLMMLGRRTGHQQ*WTHLEA
Trigger: GGCCTCAAGATGCGTCCATCACTGCTGATGACCCGT...TCTTCTTCCCAACATCATCAGACTGCCCTTTCCAAGCTCCCAATGTGTCCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR GCA 90 bp AGGAGCAGCAGCAGCTTCAGCTCGAAGCTCATGTGCAGAAAGAGGGAGCAGGAGTTCTGCGAGTTGAGCTaGTCAATGACCTGGAAGAAC +
Preference number: 2 (lower is better)
Translates to: RSSSSFSSKLMCRKREQEFCELS*SMTWKN
Trigger: GTTCTTCCAGGTCATTGAGCAGCTCAACTCGCAGAA...CTCCTGCTCCCTCTTTCTGCACATGAGCTTCGAGCTGAAGCTGCTGCTGCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR GCA 90 bp CCAATAACTCCAGCTACTACGGGTCCATGGTTCAACCCCACTCGCAGGCGGAAGTGCTTCCACTGTTTCTaGGAGTTGAGCTGCTCAATG +
Preference number: 2 (lower is better)
Translates to: PITPATTGPWFNPTRRRKCFHCF*ELSCSM
Trigger: CATTGAGCAGCTCAACTCGCAGAAACAGTGGAAGCA...CTTCCGCCTGCGAGTGGGGTTGAACCATGGACCCGTAGTAGCTGGAGTTATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR GCA 90 bp CCAATAACTCCAGCTACTACGGGTCCATGGTTCAACCCCACTCGCAGGCGGAAGTTGAAGTCCTTCGACTaGTTCCACTGTTTCTGCGAG +
Preference number: 2 (lower is better)
Translates to: PITPATTGPWFNPTRRRKLKSFD*FHCFCE
Trigger: CTCGCAGAAACAGTGGAAGCAGTCGAAGGACTTCAA...CTTCCGCCTGCGAGTGGGGTTGAACCATGGACCCGTAGTAGCTGGAGTTATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR GCA 90 bp AAGGAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGTAGGTGCAGAGCTGCCTTCAGCATCCTGTTGTaGATCCTGTCCAGAGGTGGC +
Preference number: 2 (lower is better)
Translates to: KEVQFVSSLCSGSRCRAAFSILL*ILSRGG
Trigger: GCCACCTCTGGACAGGATGCACAACAGGATGCTGAA...GGCAGCTCTGCACCTACTTCCTGAACACAGACTTGACACGAACTGGACCTCCTT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CCA 90 bp TGGGAAGAAGAACAGGCTGGTAATGGCCATGGCAAAGACAAGGAGGATGGTGGCAGCTGCTCAATGACCTaGAAGAACTTGGCATCCCCG +
Preference number: 2 (lower is better)
Translates to: WEEEQAGNGHGKDKEDGGSCSMT*KNLASP
Trigger: CGGGGATGCCAAGTTCTTCCAGGTCATTGAGCAGCT...GCCACCATCCTCCTTGTCTTTGCCATGGCCATTACCAGCCTGTTCTTCTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CCA 90 bp GAAGTCCAGGCGGCAGTAGTACTCATTCTGGCGAGCCAGGACAAGGAGGGTGAAGACACATTGGGAGCTTaGAAAGGGCAGTCTGATGAT +
Preference number: 2 (lower is better)
Translates to: EVQAAVVLILASQDKEGEDTLGA*KGQSDD
Trigger: ATCATCAGACTGCCCTTTCCAAGCTCCCAATGTGTC...TTCACCCTCCTTGTCCTGGCTCGCCAGAATGAGTACTACTGCCGCCTGGACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
3UTR-3UTR CCA 90 bp AAGGAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGTAGGTGCAGAGCTGCCGCAGTGCATGGAGTATaGGACACTGATGAGAGGCAG +
Preference number: 2 (lower is better)
Translates to: KEVQFVSSLCSGSRCRAAAVHGV*DTDERQ
Trigger: CTGCCTCTCATCAGTGTCCCATACTCCATGCACTGC...GGCAGCTCTGCACCTACTTCCTGAACACAGACTTGACACGAACTGGACCTCCTT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
3UTR-3UTR CCA 90 bp GAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGTAGGTGCAGAGCTGCCCTTTGGCATTTAAGCCTGTaGCTGCCATGTAGGTGCTGC +
Preference number: 2 (lower is better)
Translates to: EVQFVSSLCSGSRCRAALWHLSL*LPCRCC
Trigger: GCAGCACCTACATGGCAGCCACAGGCTTAAATGCCA...AAGGGCAGCTCTGCACCTACTTCCTGAACACAGACTTGACACGAACTGGACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CCA 90 bp CAGCCTAGGGTAGCTGAAGGAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGCATCCTGTCCAGAGGTaGCATTTAAGCCTGTGGCTG +
Preference number: 2 (lower is better)
Translates to: QPRVAEGGPVRVKSVFRKHPVQR*HLSLWL
Trigger: CAGCCACAGGCTTAAATGCCACCTCTGGACAGGATG...CTTCCTGAACACAGACTTGACACGAACTGGACCTCCTTCAGCTACCCTAGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CCA 90 bp GAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGTAGGTGCAGAGCTGCCCTTTGTGGGAACACTCACTaGGACACTGATGAGAGGCAG +
Preference number: 2 (lower is better)
Translates to: EVQFVSSLCSGSRCRAALCGNTH*DTDERQ
Trigger: CTGCCTCTCATCAGTGTCCCAGTGAGTGTTCCCACA...AAGGGCAGCTCTGCACCTACTTCCTGAACACAGACTTGACACGAACTGGACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
3UTR-3UTR CCA 90 bp GAAGATGAAGAAGGAGATAGCACCCATCAGTTTGGGCTCCTTCAGCACTCCGGGTGTGGGAACACTCACTaGGACACTGATGAGAGGCAG +
Preference number: 2 (lower is better)
Translates to: EDEEGDSTHQFGLLQHSGCGNTH*DTDERQ
Trigger: CTGCCTCTCATCAGTGTCCCAGTGAGTGTTCCCACA...CCCGGAGTGCTGAAGGAGCCCAAACTGATGGGTGCTATCTCCTTCTTCATCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
3UTR-3UTR TCA 90 bp AAATCATGGAGGACACATTGGGAGCTTGGAAAGGGCAGTCTGATGATGTTGGGAACGGGTCATCAGCAGTaGTGGACGCATCTTGAGGCC +
Preference number: 2 (lower is better)
Translates to: KSWRTHWELGKGSLMMLGTGHQQ*WTHLEA
Trigger: GGCCTCAAGATGCGTCCATCACTGCTGATGACCCGT...TCCCAACATCATCAGACTGCCCTTTCCAAGCTCCCAATGTGTCCTCCATGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR TCA 90 bp GAAGATGAAGAAGGAGATAGCACCCATCAGTTTGGGCTCCTTCAGCACTCCGGGCCATCTCCTTCTCTCTaGAGTACAGTGTCAGTGGGT +
Preference number: 2 (lower is better)
Translates to: EDEEGDSTHQFGLLQHSGPSPSL*STVSVG
Trigger: ACCCACTGACACTGTACTTCAGAGAGAAGGAGATGG...CCCGGAGTGCTGAAGGAGCCCAAACTGATGGGTGCTATCTCCTTCTTCATCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR TCA 90 bp TGTCTCCTCAGTCACTTGGATTTTGCCAAGGACTCCTGTACTCTCCATGCGGCTCTTGAAGTCTGGGACTaGGGCGAAGAGGACACAAAC +
Preference number: 2 (lower is better)
Translates to: CLLSHLDFAKDSCTLHAALEVWD*GEEDTN
Trigger: GTTTGTGTCCTCTTCGCCTCAGTCCCAGACTTCAAG...AGCCGCATGGAGAGTACAGGAGTCCTTGGCAAAATCCAAGTGACTGAGGAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR TCA 90 bp CCAATAACTCCAGCTACTACGGGTCCATGGTTCAACCCCACTCGCAGGCGGAAGCAGCAATTATCTCATTaGGCAGCCTCAGACACTCTA +
Preference number: 2 (lower is better)
Translates to: PITPATTGPWFNPTRRRKQQLSH*AASDTL
Trigger: TAGAGTGTCTGAGGCTGCTCAATGAGATAATTGCTG...CTTCCGCCTGCGAGTGGGGTTGAACCATGGACCCGTAGTAGCTGGAGTTATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR TCA 90 bp CCAATAACTCCAGCTACTACGGGTCCATGGTTCAACCCCACTCGCAGGCGGAAGGCGGAAGTTGTTGAATaGATGCTTGTTGATGACGTC +
Preference number: 2 (lower is better)
Translates to: PITPATTGPWFNPTRRRKAEVVE*MLVDDV
Trigger: GACGTCATCAACAAGCATTCATTCAACAACTTCCGC...CTTCCGCCTGCGAGTGGGGTTGAACCATGGACCCGTAGTAGCTGGAGTTATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR GCA 90 bp AAATCATGGAGGACACATTGGGAGCTTGGAAAGGGCAGTCTGATGATGTTGGGAGGAGGATGGTGGCGGTaGCCAAGGCTATTCTCAGTC +
Preference number: 2 (lower is better)
Translates to: KSWRTHWELGKGSLMMLGGGWWR*PRLFSV
Trigger: GACTGAGAATAGCCTTGGGCACCGCCACCATCCTCC...TCCCAACATCATCAGACTGCCCTTTCCAAGCTCCCAATGTGTCCTCCATGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CCA 90 bp GGTGCAGGCTTCATAGTATTTGAAGGCGGGGATTGCAGAGAGTCGGTACTCTTTCTCCTCCTCTGCCCGTaGATCGATGACCAGATAGGT +
Preference number: 2 (lower is better)
Translates to: GAGFIVFEGGDCRESVLFLLLCP*IDDQIG
Trigger: ACCTATCTGGTCATCGATCCACGGGCAGAGGAGGAG...AAAGAGTACCGACTCTCTGCAATCCCCGCCTTCAAATACTATGAAGCCTGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CCA 90 bp AAATCATGGAGGACACATTGGGAGCTTGGAAAGGGCAGTCTGATGATGTTGGGAGCCAGTGCAGCATCTTaGGGCCTTTCAGGACACACC +
Preference number: 2 (lower is better)
Translates to: KSWRTHWELGKGSLMMLGASAAS*GLSGHT
Trigger: GGTGTGTCCTGAAAGGCCCCAAGATGCTGCACTGGC...TCCCAACATCATCAGACTGCCCTTTCCAAGCTCCCAATGTGTCCTCCATGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CCA 90 bp AAGGAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGTAGGTGCAGAGCTGCCGCTCCCAGGAGAGGTTaGAAATCATGGAGGACACAT +
Preference number: 2 (lower is better)
Translates to: KEVQFVSSLCSGSRCRAAAPRRG*KSWRTH
Trigger: ATGTGTCCTCCATGATTTCCAACCTCTCCTGGGAGC...GGCAGCTCTGCACCTACTTCCTGAACACAGACTTGACACGAACTGGACCTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CCA 90 bp CAGCCTAGGGTAGCTGAAGGAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGGCTCCCAGGAGAGGTTaGAAATCATGGAGGACACAT +
Preference number: 2 (lower is better)
Translates to: QPRVAEGGPVRVKSVFRKAPRRG*KSWRTH
Trigger: ATGTGTCCTCCATGATTTCCAACCTCTCCTGGGAGC...CTTCCTGAACACAGACTTGACACGAACTGGACCTCCTTCAGCTACCCTAGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CCA 90 bp CAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATCTCAGGCTACTACGGGTCCATaGTTCAACCCCACTCGCAGG +
Preference number: 2 (lower is better)
Translates to: QTPQSLFIEVLRRRVQSQATTGP*FNPTRR
Trigger: CCTGCGAGTGGGGTTGAACCATGGACCCGTAGTAGC...CTGAGATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
3UTR-3UTR CCA 90 bp GAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGTAGGTGCAGAGCTGCCCTTGAGATTAAGGGCATGTaGGAACACTCACTGGGACAC +
Preference number: 2 (lower is better)
Translates to: EVQFVSSLCSGSRCRAALEIKGM*EHSLGH
Trigger: GTGTCCCAGTGAGTGTTCCCACATGCCCTTAATCTC...AAGGGCAGCTCTGCACCTACTTCCTGAACACAGACTTGACACGAACTGGACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
3UTR-3UTR TCA 90 bp AAGGAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGTAGGTGCAGAGCTGCCAGGCTTCATAGTATTTaGAGGCGGGGATTGCAGAGA +
Preference number: 2 (lower is better)
Translates to: KEVQFVSSLCSGSRCRAARLHSI*RRGLQR
Trigger: TCTCTGCAATCCCCGCCTTCAAATACTATGAAGCCT...GGCAGCTCTGCACCTACTTCCTGAACACAGACTTGACACGAACTGGACCTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR TCA 90 bp AAGGAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGTAGGTGCAGAGCTGCCCCTCATCAGGTCCTCTaGGAAGCAGACAAAAAGGAT +
Preference number: 2 (lower is better)
Translates to: KEVQFVSSLCSGSRCRAAPHQVL*EADKKD
Trigger: ATCCTTTTTGTCTGCTTCTCAGAGGACCTGATGAGG...GGCAGCTCTGCACCTACTTCCTGAACACAGACTTGACACGAACTGGACCTCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR GCA 90 bp GAAGATGAAGAAGGAGATAGCACCCATCAGTTTGGGCTCCTTCAGCACTCCGGGTTTGAAGGCGGGGATTaGAGAGAGTCGGTACTCTTT +
Preference number: 2 (lower is better)
Translates to: EDEEGDSTHQFGLLQHSGFEGGD*RESVLF
Trigger: AAAGAGTACCGACTCTCTGCAATCCCCGCCTTCAAA...CCCGGAGTGCTGAAGGAGCCCAAACTGATGGGTGCTATCTCCTTCTTCATCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CCA 90 bp ATCTCCTTCTCTCTGAAGTACAGTGTCAGTGGGTTGAAGTCCTTCGACTGCTTCCTCCTCCTCTGCCCGTaGATCGATGACCAGATAGGT +
Preference number: 2 (lower is better)
Translates to: ISFSLKYSVSGLKSFDCFLLLCP*IDDQIG
Trigger: ACCTATCTGGTCATCGATCCACGGGCAGAGGAGGAG...GAAGCAGTCGAAGGACTTCAACCCACTGACACTGTACTTCAGAGAGAAGGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CCA 90 bp GAAGATGAAGAAGGAGATAGCACCCATCAGTTTGGGCTCCTTCAGCACTCCGGGGAAGTACAGTGTCAGTaGGTTGAAGTCCTTCGACTG +
Preference number: 2 (lower is better)
Translates to: EDEEGDSTHQFGLLQHSGEVQCQ*VEVLRL
Trigger: CAGTCGAAGGACTTCAACCCACTGACACTGTACTTC...CCCGGAGTGCTGAAGGAGCCCAAACTGATGGGTGCTATCTCCTTCTTCATCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CCA 90 bp GAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGTAGGTGCAGAGCTGCCCTTGAAGTACAGTGTCAGTaGGTTGAAGTCCTTCGACTG +
Preference number: 2 (lower is better)
Translates to: EVQFVSSLCSGSRCRAALEVQCQ*VEVLRL
Trigger: CAGTCGAAGGACTTCAACCCACTGACACTGTACTTC...AAGGGCAGCTCTGCACCTACTTCCTGAACACAGACTTGACACGAACTGGACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CCA 90 bp AAATCATGGAGGACACATTGGGAGCTTGGAAAGGGCAGTCTGATGATGTTGGGACAAAGACAAGGAGGATaGTGGCGGTGCCCAAGGCTA +
Preference number: 2 (lower is better)
Translates to: KSWRTHWELGKGSLMMLGQRQGG*WRCPRL
Trigger: TAGCCTTGGGCACCGCCACCATCCTCCTTGTCTTTG...TCCCAACATCATCAGACTGCCCTTTCCAAGCTCCCAATGTGTCCTCCATGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR TCA 90 bp TGGAGGACACATTGGGAGCTTGGAAAGGGCAGTCTGATGATGTTGGGAAGAAGACCATCTCCTTCTCTCTaGAGTACAGTGTCAGTGGGT +
Preference number: 2 (lower is better)
Translates to: WRTHWELGKGSLMMLGRRPSPSL*STVSVG
Trigger: ACCCACTGACACTGTACTTCAGAGAGAAGGAGATGG...TCTTCTTCCCAACATCATCAGACTGCCCTTTCCAAGCTCCCAATGTGTCCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR TCA 90 bp GAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGTAGGTGCAGAGCTGCCCTTCTAGGCCCTCATGATTaGTGTTGGATTCAGAGTAGA +
Preference number: 2 (lower is better)
Translates to: EVQFVSSLCSGSRCRAALLGPHD*CWIQSR
Trigger: TCTACTCTGAATCCAACATCAATCATGAGGGCCTAG...AAGGGCAGCTCTGCACCTACTTCCTGAACACAGACTTGACACGAACTGGACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR TCA 90 bp CAGCCTAGGGTAGCTGAAGGAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGGCGGAAGTTGTTGAATaGATGCTTGTTGATGACGTC +
Preference number: 2 (lower is better)
Translates to: QPRVAEGGPVRVKSVFRKAEVVE*MLVDDV
Trigger: GACGTCATCAACAAGCATTCATTCAACAACTTCCGC...CTTCCTGAACACAGACTTGACACGAACTGGACCTCCTTCAGCTACCCTAGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR GCA 90 bp TGTCTCCTCAGTCACTTGGATTTTGCCAAGGACTCCTGTACTCTCCATGCGGCTTGCTTCCACTGTTTCTaGGAGTTGAGCTGCTCAATG +
Preference number: 2 (lower is better)
Translates to: CLLSHLDFAKDSCTLHAACFHCF*ELSCSM
Trigger: CATTGAGCAGCTCAACTCGCAGAAACAGTGGAAGCA...AGCCGCATGGAGAGTACAGGAGTCCTTGGCAAAATCCAAGTGACTGAGGAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR GCA 90 bp CAGTGTCAGTGGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCGAGTTGAGTTGAAGTCCTTCGACTaGTTCCACTGTTTCTGCGAG +
Preference number: 2 (lower is better)
Translates to: QCQWVEVLRLLPLFLRVELKSFD*FHCFCE
Trigger: CTCGCAGAAACAGTGGAAGCAGTCGAAGGACTTCAA...CTCAACTCGCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACTGACACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CCA 90 bp TATTTGAAGGCGGGGATTGCAGAGAGTCGGTACTCTTTCTCCATCTCCTTCTCTAGCTGCTCAATGACCTaGAAGAACTTGGCATCCCCG +
Preference number: 2 (lower is better)
Translates to: YLKAGIAESRYSFSISFSSCSMT*KNLASP
Trigger: CGGGGATGCCAAGTTCTTCCAGGTCATTGAGCAGCT...AGAGAAGGAGATGGAGAAAGAGTACCGACTCTCTGCAATCCCCGCCTTCAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR CAA 90 bp TACTCTTTCTCCATCTCCTTCTCTCTGAAGTACAGTGTCAGTGGGTaGAAGTCCTTCGACTGCTTCCACTGTTTCTGCGAGTTGAGCTGC +
Preference number: 2 (lower is better)
Translates to: YSFSISFSLKYSVSG*KSFDCFHCFCELSC
Trigger: GCAGCTCAACTCGCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACTGACACTGTACTTCAGAGAGAAGGAGATGGAGAAAGAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR TCA 90 bp TGGAGGACACATTGGGAGCTTGGAAAGGGCAGTCTGATGATGTTGGGAAGAAGAAGGCTTCATAGTATTTaGAGGCGGGGATTGCAGAGA +
Preference number: 2 (lower is better)
Translates to: WRTHWELGKGSLMMLGRRRLHSI*RRGLQR
Trigger: TCTCTGCAATCCCCGCCTTCAAATACTATGAAGCCT...TCTTCTTCCCAACATCATCAGACTGCCCTTTCCAAGCTCCCAATGTGTCCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR TCA 90 bp TGTCTCCTCAGTCACTTGGATTTTGCCAAGGACTCCTGTACTCTCCATGCGGCTCAGCAATTATCTCATTaGGCAGCCTCAGACACTCTA +
Preference number: 2 (lower is better)
Translates to: CLLSHLDFAKDSCTLHAAQQLSH*AASDTL
Trigger: TAGAGTGTCTGAGGCTGCTCAATGAGATAATTGCTG...AGCCGCATGGAGAGTACAGGAGTCCTTGGCAAAATCCAAGTGACTGAGGAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR GCA 90 bp GGTGCAGGCTTCATAGTATTTGAAGGCGGGGATTGCAGAGAGTCGGTACTCTTTTTCTGCGAGTTGAGCTaGTCAATGACCTGGAAGAAC +
Preference number: 2 (lower is better)
Translates to: GAGFIVFEGGDCRESVLFFCELS*SMTWKN
Trigger: GTTCTTCCAGGTCATTGAGCAGCTCAACTCGCAGAA...AAAGAGTACCGACTCTCTGCAATCCCCGCCTTCAAATACTATGAAGCCTGCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR GCA 90 bp TGGAGGACACATTGGGAGCTTGGAAAGGGCAGTCTGATGATGTTGGGAAGAAGATTTGAAGGCGGGGATTaGAGAGAGTCGGTACTCTTT +
Preference number: 2 (lower is better)
Translates to: WRTHWELGKGSLMMLGRRFEGGD*RESVLF
Trigger: AAAGAGTACCGACTCTCTGCAATCCCCGCCTTCAAA...TCTTCTTCCCAACATCATCAGACTGCCCTTTCCAAGCTCCCAATGTGTCCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR TCA 90 bp AAATCATGGAGGACACATTGGGAGCTTGGAAAGGGCAGTCTGATGATGTTGGGAAGGCTTCATAGTATTTaGAGGCGGGGATTGCAGAGA +
Preference number: 2 (lower is better)
Translates to: KSWRTHWELGKGSLMMLGRLHSI*RRGLQR
Trigger: TCTCTGCAATCCCCGCCTTCAAATACTATGAAGCCT...TCCCAACATCATCAGACTGCCCTTTCCAAGCTCCCAATGTGTCCTCCATGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR TCA 90 bp CAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATCTCAGCCTCATCAGGTCCTCTaGGAAGCAGACAAAAAGGAT +
Preference number: 2 (lower is better)
Translates to: QTPQSLFIEVLRRRVQSQPHQVL*EADKKD
Trigger: ATCCTTTTTGTCTGCTTCTCAGAGGACCTGATGAGG...CTGAGATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
3UTR-3UTR GCA 90 bp CAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATCTCAGTTCTGCGAGTTGAGCTaGTCAATGACCTGGAAGAAC +
Preference number: 2 (lower is better)
Translates to: QTPQSLFIEVLRRRVQSQFCELS*SMTWKN
Trigger: GTTCTTCCAGGTCATTGAGCAGCTCAACTCGCAGAA...CTGAGATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
3UTR-3UTR TCA 90 bp CAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATCTCAGCAGCAATTATCTCATTaGGCAGCCTCAGACACTCTA +
Preference number: 2 (lower is better)
Translates to: QTPQSLFIEVLRRRVQSQQQLSH*AASDTL
Trigger: TAGAGTGTCTGAGGCTGCTCAATGAGATAATTGCTG...CTGAGATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
3UTR-3UTR CCA 90 bp CAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATCTCAGCTTAGAAGCTTCCAATaGGCATTCAACCCTGGAGAT +
Preference number: 2 (lower is better)
Translates to: QTPQSLFIEVLRRRVQSQLRSFQ*AFNPGD
Trigger: ATCTCCAGGGTTGAATGCCCATTGGAAGCTTCTAAG...CTGAGATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
3UTR TCA 72 bp ACCTGGAGTCCAAGGGGCCCAGATAGAGGCGGACGATaGGGCATTCCGACAGCCAGGCATGGGAGTGCAGGA +
Preference number: 3 (lower is better)
Translates to: TWSPRGPDRGGR*GIPTARHGSAG
Trigger: TCCTGCACTCCCATGCCTGGCTGTCGGAATGCCTCATCGTCCGCCTCTATCTGGGCCCCTTGGACTCCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
3UTR TCA 72 bp GTAGGCCTCCGCTTCCCTCCCACTTTGCCCTGTGGGTaGTTCAGGTCGGTGAGGCCAGGACAGCTCTGCTGT +
Preference number: 3 (lower is better)
Translates to: VGLRFPPTLPCG*FRSVRPGQLCC
Trigger: ACAGCAGAGCTGTCCTGGCCTCACCGACCTGAATCACCCACAGGGCAAAGTGGGAGGGAAGCGGAGGCCTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
3UTR CCA 72 bp CCATGTAGGCCTCCGCTTCCCTCCCACTTTGCCCTGTaGGTGATTCAGGTCGGTGAGGCCAGGACAGCTCTG +
Preference number: 3 (lower is better)
Translates to: PCRPPLPSHFAL*VIQVGEARTAL
Trigger: CAGAGCTGTCCTGGCCTCACCGACCTGAATCACCCACAGGGCAAAGTGGGAGGGAAGCGGAGGCCTACATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
3UTR CCA 72 bp CCAGGCCAGACAGTGCAGGCAGCCAGTGCAGCATCTTaGGGCCTTTCAGGACACACCTCATCAGGTCCTCTG +
Preference number: 3 (lower is better)
Translates to: PGQTVQAASAAS*GLSGHTSSGPL
Trigger: CAGAGGACCTGATGAGGTGTGTCCTGAAAGGCCCCAAGATGCTGCACTGGCTGCCTGCACTGTCTGGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR TCA 72 bp CCAGGTAACGGGTCATCAGCAGTGATGGACGCATCTTaGGGCCCTCAAGCGAGGACAGCAAGCCTCCTGCAG +
Preference number: 3 (lower is better)
Translates to: PGNGSSAVMDAS*GPQARTASLLQ
Trigger: CTGCAGGAGGCTTGCTGTCCTCGCTTGAGGGCCTCAAGATGCGTCCATCACTGCTGATGACCCGTTACCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR CCA 72 bp CCCAGGGCCACGGCAAATTCCACCATAGTGCCAAGGTaGCTGCAGCTCCGTTCAGCATCCTGTTGTGCATCC +
Preference number: 3 (lower is better)
Translates to: PRATANSTIVPR*LQLRSASCCAS
Trigger: GGATGCACAACAGGATGCTGAACGGAGCTGCAGCCACCTTGGCACTATGGTGGAATTTGCCGTGGCCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR CCA 72 bp GCTCCCTTCCTGTCCCTCCCAGGCCCAGGTCCTATCTaGGAGACAGGGGGCATCATACACACTGATACACAC +
Preference number: 3 (lower is better)
Translates to: APFLSLPGPGPI*ETGGIIHTDTH
Trigger: GTGTGTATCAGTGTGTATGATGCCCCCTGTCTCCCAGATAGGACCTGGGCCTGGGAGGGACAGGAAGGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
3UTR-3UTR CAA 90 bp GTGCAGCAGTGCATGGAGTATGGGACACTGATGAGAGGCAGAGACCCAGGGAGCAGCCAGTGCAGCATCTaGGGGCCTTTCAGGACACAC +
Preference number: 3 (lower is better)
Translates to: VQQCMEYGTLMRGRDPGSSQCSI*GPFRTH
Trigger: GTGTGTCCTGAAAGGCCCCAAGATGCTGCACTGGCT...GCTCCCTGGGTCTCTGCCTCTCATCAGTGTCCCATACTCCATGCACTGCTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
3UTR-3UTR CAA 90 bp GGTGCCCAAGGCTATTCTCAGTCCTGGTCGTGTGGCCACCAGGCCAGACAGTGCTACAGTGTCAGTGGGTaGAAGTCCTTCGACTGCTTC +
Preference number: 3 (lower is better)
Translates to: GAQGYSQSWSCGHQARQCYSVSG*KSFDCF
Trigger: GAAGCAGTCGAAGGACTTCAACCCACTGACACTGTA...GCACTGTCTGGCCTGGTGGCCACACGACCAGGACTGAGAATAGCCTTGGGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CAA 90 bp GTGCAGCAGTGCATGGAGTATGGGACACTGATGAGAGGCAGAGACCCAGGGAGCATCATGGAGGACACATaGGGAGCTTGGAAAGGGCAG +
Preference number: 3 (lower is better)
Translates to: VQQCMEYGTLMRGRDPGSIMEDT*GAWKGQ
Trigger: CTGCCCTTTCCAAGCTCCCAATGTGTCCTCCATGAT...GCTCCCTGGGTCTCTGCCTCTCATCAGTGTCCCATACTCCATGCACTGCTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
3UTR-3UTR CAA 90 bp CCAATAACTCCAGCTACTACGGGTCCATGGTTCAACCCCACTCGCAGGCGGAAGATAGCACCCATCAGTTaGGGCTCCTTCAGCACTCCG +
Preference number: 3 (lower is better)
Translates to: PITPATTGPWFNPTRRRKIAPIS*GSFSTP
Trigger: CGGAGTGCTGAAGGAGCCCAAACTGATGGGTGCTAT...CTTCCGCCTGCGAGTGGGGTTGAACCATGGACCCGTAGTAGCTGGAGTTATTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CAA 90 bp CCCAGGGCCACGGCAAATTCCACCATAGTGCCAAGGTGGCTGCAGCTCCGTTCACCACTGAACTTGGGCTaGGAGAGCAGCTCATCAAAA +
Preference number: 3 (lower is better)
Translates to: PRATANSTIVPRWLQLRSPLNLG*ESSSSK
Trigger: TTTTGATGAGCTGCTCTCCAAGCCCAAGTTCAGTGG...TGAACGGAGCTGCAGCCACCTTGGCACTATGGTGGAATTTGCCGTGGCCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CAA 90 bp CCCAGGGCCACGGCAAATTCCACCATAGTGCCAAGGTGGCTGCAGCTCCGTTCACCCAGAGTCTCTTTATaGAGGTTCTTAGAAGGCGAG +
Preference number: 3 (lower is better)
Translates to: PRATANSTIVPRWLQLRSPRVSL*RFLEGE
Trigger: CTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGG...TGAACGGAGCTGCAGCCACCTTGGCACTATGGTGGAATTTGCCGTGGCCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
3UTR-3UTR CAA 90 bp GAAGATGAAGAAGGAGATAGCACCCATCAGTTTGGGCTCCTTCAGCACTCCGGGAGTGATGGACGCATCTaGAGGCCCTCAAGCGAGGAC +
Preference number: 3 (lower is better)
Translates to: EDEEGDSTHQFGLLQHSGSDGRI*RPSSED
Trigger: GTCCTCGCTTGAGGGCCTCAAGATGCGTCCATCACT...CCCGGAGTGCTGAAGGAGCCCAAACTGATGGGTGCTATCTCCTTCTTCATCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CAA 90 bp AAGGAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGTAGGTGCAGAGCTGCCAGTGATGGACGCATCTaGAGGCCCTCAAGCGAGGAC +
Preference number: 3 (lower is better)
Translates to: KEVQFVSSLCSGSRCRAASDGRI*RPSSED
Trigger: GTCCTCGCTTGAGGGCCTCAAGATGCGTCCATCACT...GGCAGCTCTGCACCTACTTCCTGAACACAGACTTGACACGAACTGGACCTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CAA 90 bp GAAGATGAAGAAGGAGATAGCACCCATCAGTTTGGGCTCCTTCAGCACTCCGGGAGCCAGTGCAGCATCTaGGGGCCTTTCAGGACACAC +
Preference number: 3 (lower is better)
Translates to: EDEEGDSTHQFGLLQHSGSQCSI*GPFRTH
Trigger: GTGTGTCCTGAAAGGCCCCAAGATGCTGCACTGGCT...CCCGGAGTGCTGAAGGAGCCCAAACTGATGGGTGCTATCTCCTTCTTCATCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CAA 90 bp AGGAGCAGCAGCAGCTTCAGCTCGAAGCTCATGTGCAGAAAGAGGGAGCAGGAGATCATGGAGGACACATaGGGAGCTTGGAAAGGGCAG +
Preference number: 3 (lower is better)
Translates to: RSSSSFSSKLMCRKREQEIMEDT*GAWKGQ
Trigger: CTGCCCTTTCCAAGCTCCCAATGTGTCCTCCATGAT...CTCCTGCTCCCTCTTTCTGCACATGAGCTTCGAGCTGAAGCTGCTGCTGCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR CCA 72 bp TCCGTTCAGCATCCTGTTGTGCATCCTGTCCAGAGGTaGCATTTAAGCCTGTGGCTGCCATGTAGGTGCTGC +
Preference number: 3 (lower is better)
Translates to: SVQHPVVHPVQR*HLSLWLPCRCC
Trigger: GCAGCACCTACATGGCAGCCACAGGCTTAAATGCCACCTCTGGACAGGATGCACAACAGGATGCTGAACGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR CCA 72 bp TGCAGAAGGAGATTAAGGGCATGTGGGAACACTCACTaGGACACTGATGAGAGGCAGAGACCCAGGGAGCTC +
Preference number: 3 (lower is better)
Translates to: CRRRLRACGNTH*DTDERQRPREL
Trigger: GAGCTCCCTGGGTCTCTGCCTCTCATCAGTGTCCCAGTGAGTGTTCCCACATGCCCTTAATCTCCTTCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
3UTR-3UTR CAA 90 bp CAGCCTAGGGTAGCTGAAGGAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGATAGCACCCATCAGTTaGGGCTCCTTCAGCACTCCG +
Preference number: 3 (lower is better)
Translates to: QPRVAEGGPVRVKSVFRKIAPIS*GSFSTP
Trigger: CGGAGTGCTGAAGGAGCCCAAACTGATGGGTGCTAT...CTTCCTGAACACAGACTTGACACGAACTGGACCTCCTTCAGCTACCCTAGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CAA 90 bp AAGGAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGTAGGTGCAGAGCTGCCGCCCCAAATGTCATATaGCGGCTTCTGGGCCCCAAT +
Preference number: 3 (lower is better)
Translates to: KEVQFVSSLCSGSRCRAAAPNVI*RLLGPN
Trigger: ATTGGGGCCCAGAAGCCGCAATATGACATTTGGGGC...GGCAGCTCTGCACCTACTTCCTGAACACAGACTTGACACGAACTGGACCTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CAA 90 bp CAGCCTAGGGTAGCTGAAGGAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGGCCCCAAATGTCATATaGCGGCTTCTGGGCCCCAAT +
Preference number: 3 (lower is better)
Translates to: QPRVAEGGPVRVKSVFRKAPNVI*RLLGPN
Trigger: ATTGGGGCCCAGAAGCCGCAATATGACATTTGGGGC...CTTCCTGAACACAGACTTGACACGAACTGGACCTCCTTCAGCTACCCTAGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CAA 90 bp CAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATCTCAGGATCAGGGTGACCCCTaGCTTTCCCCCTTCCTGGCC +
Preference number: 3 (lower is better)
Translates to: QTPQSLFIEVLRRRVQSQDQGDP*LSPFLA
Trigger: GGCCAGGAAGGGGGAAAGCAAGGGGTCACCCTGATC...CTGAGATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
3UTR GCA 72 bp TCCTTCGACTGCTTCCACTGTTTCTGCGAGTTGAGCTaGTCAATGACCTGGAAGAACTTGGCATCCCCGGTG +
Preference number: 3 (lower is better)
Translates to: SFDCFHCFCELS*SMTWKNLASPV
Trigger: CACCGGGGATGCCAAGTTCTTCCAGGTCATTGAGCAGCTCAACTCGCAGAAACAGTGGAAGCAGTCGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CAA 90 bp AGTGGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCGAGTTGAGCTGCTCAATGACCTGGAAGAACTaGGCATCCCCGGTGTCCAGT +
Preference number: 3 (lower is better)
Translates to: SGLKSFDCFHCFCELSCSMTWKN*ASPVSS
Trigger: ACTGGACACCGGGGATGCCAAGTTCTTCCAGGTCAT...TGAGCAGCTCAACTCGCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CAA 90 bp CAAGGCTATTCTCAGTCCTGGTCGTGTGGCCACCAGGCCAGACAGTGCAGGCAGATCTGGATGATGAAGTaGGAGAGAAAAACCAGGAAG +
Preference number: 3 (lower is better)
Translates to: QGYSQSWSCGHQARQCRQIWMMK*ERKTRK
Trigger: CTTCCTGGTTTTTCTCTCCAACTTCATCATCCAGAT...CTGCCTGCACTGTCTGGCCTGGTGGCCACACGACCAGGACTGAGAATAGCCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CAA 90 bp CCAATAACTCCAGCTACTACGGGTCCATGGTTCAACCCCACTCGCAGGCGGAAGCGCAGGCGGAAGTTGTaGAATGAATGCTTGTTGATG +
Preference number: 3 (lower is better)
Translates to: PITPATTGPWFNPTRRRKRRRKL*NECLLM
Trigger: CATCAACAAGCATTCATTCAACAACTTCCGCCTGCG...CTTCCGCCTGCGAGTGGGGTTGAACCATGGACCCGTAGTAGCTGGAGTTATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CAA 90 bp ATCTCCTTCTCTCTGAAGTACAGTGTCAGTGGGTTGAAGTCCTTCGACTGCTTCAGTGATGGACGCATCTaGAGGCCCTCAAGCGAGGAC +
Preference number: 3 (lower is better)
Translates to: ISFSLKYSVSGLKSFDCFSDGRI*RPSSED
Trigger: GTCCTCGCTTGAGGGCCTCAAGATGCGTCCATCACT...GAAGCAGTCGAAGGACTTCAACCCACTGACACTGTACTTCAGAGAGAAGGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CAA 90 bp GGTGCAGGCTTCATAGTATTTGAAGGCGGGGATTGCAGAGAGTCGGTACTCTTTATGACCTGGAAGAACTaGGCATCCCCGGTGTCCAGT +
Preference number: 3 (lower is better)
Translates to: GAGFIVFEGGDCRESVLFMTWKN*ASPVSS
Trigger: ACTGGACACCGGGGATGCCAAGTTCTTCCAGGTCAT...AAAGAGTACCGACTCTCTGCAATCCCCGCCTTCAAATACTATGAAGCCTGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CAA 90 bp TGTCTCCTCAGTCACTTGGATTTTGCCAAGGACTCCTGTACTCTCCATGCGGCTCACTGTTTCTGCGAGTaGAGCTGCTCAATGACCTGG +
Preference number: 3 (lower is better)
Translates to: CLLSHLDFAKDSCTLHAAHCFCE*SCSMTW
Trigger: CCAGGTCATTGAGCAGCTCAACTCGCAGAAACAGTG...AGCCGCATGGAGAGTACAGGAGTCCTTGGCAAAATCCAAGTGACTGAGGAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CAA 90 bp AGATTAAGGGCATGTGGGAACACTCACTGGGACACTGATGAGAGGCAGAGACCCTACAGTGTCAGTGGGTaGAAGTCCTTCGACTGCTTC +
Preference number: 3 (lower is better)
Translates to: RLRACGNTHWDTDERQRPYSVSG*KSFDCF
Trigger: GAAGCAGTCGAAGGACTTCAACCCACTGACACTGTA...GGGTCTCTGCCTCTCATCAGTGTCCCAGTGAGTGTTCCCACATGCCCTTAATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
3UTR-3UTR CAA 90 bp GAAGATGAAGAAGGAGATAGCACCCATCAGTTTGGGCTCCTTCAGCACTCCGGGTACAGTGTCAGTGGGTaGAAGTCCTTCGACTGCTTC +
Preference number: 3 (lower is better)
Translates to: EDEEGDSTHQFGLLQHSGYSVSG*KSFDCF
Trigger: GAAGCAGTCGAAGGACTTCAACCCACTGACACTGTA...CCCGGAGTGCTGAAGGAGCCCAAACTGATGGGTGCTATCTCCTTCTTCATCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CAA 90 bp AAGGAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGTAGGTGCAGAGCTGCCCCACTGAACTTGGGCTaGGAGAGCAGCTCATCAAAA +
Preference number: 3 (lower is better)
Translates to: KEVQFVSSLCSGSRCRAAPLNLG*ESSSSK
Trigger: TTTTGATGAGCTGCTCTCCAAGCCCAAGTTCAGTGG...GGCAGCTCTGCACCTACTTCCTGAACACAGACTTGACACGAACTGGACCTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CAA 90 bp CAGCCTAGGGTAGCTGAAGGAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGTGTCTCCTCAGTCACTaGGATTTTGCCAAGGACTCC +
Preference number: 3 (lower is better)
Translates to: QPRVAEGGPVRVKSVFRKCLLSH*DFAKDS
Trigger: GGAGTCCTTGGCAAAATCCAAGTGACTGAGGAGACA...CTTCCTGAACACAGACTTGACACGAACTGGACCTCCTTCAGCTACCCTAGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CAA 90 bp AAGGAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGTAGGTGCAGAGCTGCCTGTCTCCTCAGTCACTaGGATTTTGCCAAGGACTCC +
Preference number: 3 (lower is better)
Translates to: KEVQFVSSLCSGSRCRAACLLSH*DFAKDS
Trigger: GGAGTCCTTGGCAAAATCCAAGTGACTGAGGAGACA...GGCAGCTCTGCACCTACTTCCTGAACACAGACTTGACACGAACTGGACCTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CAA 90 bp TATTTGAAGGCGGGGATTGCAGAGAGTCGGTACTCTTTCTCCATCTCCTTCTCTATGACCTGGAAGAACTaGGCATCCCCGGTGTCCAGT +
Preference number: 3 (lower is better)
Translates to: YLKAGIAESRYSFSISFSMTWKN*ASPVSS
Trigger: ACTGGACACCGGGGATGCCAAGTTCTTCCAGGTCAT...AGAGAAGGAGATGGAGAAAGAGTACCGACTCTCTGCAATCCCCGCCTTCAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CAA 90 bp ATCTCCTTCTCTCTGAAGTACAGTGTCAGTGGGTTGAAGTCCTTCGACTGCTTCATGACCTGGAAGAACTaGGCATCCCCGGTGTCCAGT +
Preference number: 3 (lower is better)
Translates to: ISFSLKYSVSGLKSFDCFMTWKN*ASPVSS
Trigger: ACTGGACACCGGGGATGCCAAGTTCTTCCAGGTCAT...GAAGCAGTCGAAGGACTTCAACCCACTGACACTGTACTTCAGAGAGAAGGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CAA 90 bp TGTCTCCTCAGTCACTTGGATTTTGCCAAGGACTCCTGTACTCTCCATGCGGCTTACAGTGTCAGTGGGTaGAAGTCCTTCGACTGCTTC +
Preference number: 3 (lower is better)
Translates to: CLLSHLDFAKDSCTLHAAYSVSG*KSFDCF
Trigger: GAAGCAGTCGAAGGACTTCAACCCACTGACACTGTA...AGCCGCATGGAGAGTACAGGAGTCCTTGGCAAAATCCAAGTGACTGAGGAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CAA 90 bp AAGGAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGTAGGTGCAGAGCTGCCTCAGTCACTTGGATTTaGCCAAGGACTCCTGTACTC +
Preference number: 3 (lower is better)
Translates to: KEVQFVSSLCSGSRCRAASVTWI*PRTPVL
Trigger: GAGTACAGGAGTCCTTGGCAAAATCCAAGTGACTGA...GGCAGCTCTGCACCTACTTCCTGAACACAGACTTGACACGAACTGGACCTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR CCA 72 bp TTCCACTGTTTCTGCGAGTTGAGCTGCTCAATGACCTaGAAGAACTTGGCATCCCCGGTGTCCAGTTCATCA +
Preference number: 3 (lower is better)
Translates to: FHCFCELSCSMT*KNLASPVSSSS
Trigger: TGATGAACTGGACACCGGGGATGCCAAGTTCTTCCAGGTCATTGAGCAGCTCAACTCGCAGAAACAGTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CAA 90 bp ATCTCCTTCTCTCTGAAGTACAGTGTCAGTGGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCGAGTaGAGCTGCTCAATGACCTGG +
Preference number: 3 (lower is better)
Translates to: ISFSLKYSVSGLKSFDCFHCFCE*SCSMTW
Trigger: CCAGGTCATTGAGCAGCTCAACTCGCAGAAACAGTG...GAAGCAGTCGAAGGACTTCAACCCACTGACACTGTACTTCAGAGAGAAGGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CAA 90 bp TATTTGAAGGCGGGGATTGCAGAGAGTCGGTACTCTTTCTCCATCTCCTTCTCTCACTGTTTCTGCGAGTaGAGCTGCTCAATGACCTGG +
Preference number: 3 (lower is better)
Translates to: YLKAGIAESRYSFSISFSHCFCE*SCSMTW
Trigger: CCAGGTCATTGAGCAGCTCAACTCGCAGAAACAGTG...AGAGAAGGAGATGGAGAAAGAGTACCGACTCTCTGCAATCCCCGCCTTCAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CAA 90 bp GAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGTAGGTGCAGAGCTGCCCTTTCAGCAATTATCTCATaGAGCAGCCTCAGACACTCT +
Preference number: 3 (lower is better)
Translates to: EVQFVSSLCSGSRCRAALSAIIS*SSLRHS
Trigger: AGAGTGTCTGAGGCTGCTCAATGAGATAATTGCTGA...AAGGGCAGCTCTGCACCTACTTCCTGAACACAGACTTGACACGAACTGGACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CAA 90 bp CAGCCTAGGGTAGCTGAAGGAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGTCAGCAATTATCTCATaGAGCAGCCTCAGACACTCT +
Preference number: 3 (lower is better)
Translates to: QPRVAEGGPVRVKSVFRKSAIIS*SSLRHS
Trigger: AGAGTGTCTGAGGCTGCTCAATGAGATAATTGCTGA...CTTCCTGAACACAGACTTGACACGAACTGGACCTCCTTCAGCTACCCTAGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR GCA 72 bp CTGAAGTACAGTGTCAGTGGGTTGAAGTCCTTCGACTaGTTCCACTGTTTCTGCGAGTTGAGCTGCTCAATG +
Preference number: 3 (lower is better)
Translates to: LKYSVSGLKSFD*FHCFCELSCSM
Trigger: CATTGAGCAGCTCAACTCGCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACTGACACTGTACTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR GCA 72 bp GAAGGTGCAGGCTTCATAGTATTTGAAGGCGGGGATTaGAGAGAGTCGGTACTCTTTCTCCATCTCCTTCTC +
Preference number: 3 (lower is better)
Translates to: EGAGFIVFEGGD*RESVLFLHLLL
Trigger: GAGAAGGAGATGGAGAAAGAGTACCGACTCTCTGCAATCCCCGCCTTCAAATACTATGAAGCCTGCACCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR-3UTR CAA 90 bp CTGAAGTACAGTGTCAGTGGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCCCCAGAGTCTCTTTATaGAGGTTCTTAGAAGGCGAG +
Preference number: 3 (lower is better)
Translates to: LKYSVSGLKSFDCFHCFCPRVSL*RFLEGE
Trigger: CTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGG...GCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACTGACACTGTACTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
3UTR-3UTR CAA 90 bp GAAGATGAAGAAGGAGATAGCACCCATCAGTTTGGGCTCCTTCAGCACTCCGGGATCTGGATGATGAAGTaGGAGAGAAAAACCAGGAAG +
Preference number: 3 (lower is better)
Translates to: EDEEGDSTHQFGLLQHSGIWMMK*ERKTRK
Trigger: CTTCCTGGTTTTTCTCTCCAACTTCATCATCCAGAT...CCCGGAGTGCTGAAGGAGCCCAAACTGATGGGTGCTATCTCCTTCTTCATCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR CCA 72 bp GAGAGGTTGGAAATCATGGAGGACACATTGGGAGCTTaGAAAGGGCAGTCTGATGATGTTGGGAAGAAGAAC +
Preference number: 3 (lower is better)
Translates to: ERLEIMEDTLGA*KGQSDDVGKKN
Trigger: GTTCTTCTTCCCAACATCATCAGACTGCCCTTTCCAAGCTCCCAATGTGTCCTCCATGATTTCCAACCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR TCA 72 bp ACAGGGGGCATCATACACACTGATACACACTGGGTGTaGCTTATGTCTGTTCTAATCCACAGAATGGAGCGT +
Preference number: 3 (lower is better)
Translates to: TGGIIHTDTHWV*LMSVLIHRMER
Trigger: ACGCTCCATTCTGTGGATTAGAACAGACATAAGTCACACCCAGTGTGTATCAGTGTGTATGATGCCCCCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
3UTR CCA 72 bp ATCCTTGAAATTAGATTCAGACTAGGGATAGAGAATTaGCAGCAGACTTTTTCTAAAGCATGGGCTTTCCCA +
Preference number: 3 (lower is better)
Translates to: ILEIRFRLGIEN*QQTFSKAWAFP
Trigger: TGGGAAAGCCCATGCTTTAGAAAAAGTCTGCTGCCAATTCTCTATCCCTAGTCTGAATCTAATTTCAAGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR GCA 90 bp CCTTCTCCCTGCCCCCATGTAGGCCTCCGCTTCCCTCCCACTTTGCCCTGTGGGCAGCGCTGCAGTCGCTaGTCCCGGGAAGCGAGGCCC +
Preference number: 4 (lower is better)
Translates to: PSPCPHVGLRFPPTLPCGQRCSR*SREARP
Trigger: GGGCCTCGCTTCCCGGGAGCAGCGACTGCAGCGCTG...CCCACAGGGCAAAGTGGGAGGGAAGCGGAGGCCTACATGGGGGCAGGGAGAAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR GCA 90 bp GCCAGGGTCTTCTCCGGGAGAGGGGTGGAGGTGGACACAGGGCTGTCTCCGTGGCGGCGGCGTCCCGCATaGCCAAGGGCAGCATGGCAT +
Preference number: 4 (lower is better)
Translates to: ARVFSGRGVEVDTGLSPWRRRPA*PRAAWH
Trigger: ATGCCATGCTGCCCTTGGGCATGCGGGACGCCGCCG...CCACGGAGACAGCCCTGTGTCCACCTCCACCCCTCTCCCGGAGAAGACCCTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp GCCAGGGTCTTCTCCGGGAGAGGGGTGGAGGTGGACACAGGGCTGTCTCCGTGGTCAGCTCCCTGCCGCTaGCCCAGGCCACTGCGAGCA +
Preference number: 4 (lower is better)
Translates to: ARVFSGRGVEVDTGLSPWSAPCR*PRPLRA
Trigger: TGCTCGCAGTGGCCTGGGCCAGCGGCAGGGAGCTGA...CCACGGAGACAGCCCTGTGTCCACCTCCACCCCTCTCCCGGAGAAGACCCTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
CDS-3UTR GCA 90 bp CCTTCTCCCTGCCCCCATGTAGGCCTCCGCTTCCCTCCCACTTTGCCCTGTGGGGGACGCGTCCAGCGCTaGAGTCGCTGCTCCCGGGAA +
Preference number: 4 (lower is better)
Translates to: PSPCPHVGLRFPPTLPCGGRVQR*SRCSRE
Trigger: TTCCCGGGAGCAGCGACTGCAGCGCTGGACGCGTCC...CCCACAGGGCAAAGTGGGAGGGAAGCGGAGGCCTACATGGGGGCAGGGAGAAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR TCA 90 bp CCTTCTCCCTGCCCCCATGTAGGCCTCCGCTTCCCTCCCACTTTGCCCTGTGGGGTGAGTGCAGGGAGCTaGGTGCCTCCCGGAACGTGG +
Preference number: 4 (lower is better)
Translates to: PSPCPHVGLRFPPTLPCGVSAGS*VPPGTW
Trigger: CCACGTTCCGGGAGGCACTCAGCTCCCTGCACTCAC...CCCACAGGGCAAAGTGGGAGGGAAGCGGAGGCCTACATGGGGGCAGGGAGAAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR TCA 90 bp GTCCAAGGGGCCCAGATAGAGGCGGACGATGAGGCATTCCGACAGCCAGGCATGGTCCAGCCGCCGGCGTaGGTGCAGGGAGCTGAGTGC +
Preference number: 4 (lower is better)
Translates to: VQGAQIEADDEAFRQPGMVQPPA*VQGAEC
Trigger: GCACTCAGCTCCCTGCACTCACGCCGGCGGCTGGAC...CATGCCTGGCTGTCGGAATGCCTCATCGTCCGCCTCTATCTGGGCCCCTTGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp AGGAAGCCCAGCGTGCAGCAGTGCATGGAGTACTGTGGGGCCAGGCAGGGGTCAAGCCGAAGGCCCAAGTaGGGCTGGTCCCAGGCGCTC +
Preference number: 4 (lower is better)
Translates to: RKPSVQQCMEYCGARQGSSRRPK*GWSQAL
Trigger: GAGCGCCTGGGACCAGCCCCACTTGGGCCTTCGGCT...TGACCCCTGCCTGGCCCCACAGTACTCCATGCACTGCTGCACGCTGGGCTTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR TCA 90 bp GCCAGGGTCTTCTCCGGGAGAGGGGTGGAGGTGGACACAGGGCTGTCTCCGTGGACACAGTACGCTGCCTaGGTGCACGCCCACACGCAT +
Preference number: 4 (lower is better)
Translates to: ARVFSGRGVEVDTGLSPWTQYAA*VHAHTH
Trigger: ATGCGTGTGGGCGTGCACTCAGGCAGCGTACTGTGT...CCACGGAGACAGCCCTGTGTCCACCTCCACCCCTCTCCCGGAGAAGACCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp CCCAGGGCCACGGCAAATTCCACCATAGTGCCAAGGTGGCTGCAGCTCCGTTCACAGCGCTGCAGTCGCTaGTCCCGGGAAGCGAGGCCC +
Preference number: 4 (lower is better)
Translates to: PRATANSTIVPRWLQLRSQRCSR*SREARP
Trigger: GGGCCTCGCTTCCCGGGAGCAGCGACTGCAGCGCTG...TGAACGGAGCTGCAGCCACCTTGGCACTATGGTGGAATTTGCCGTGGCCCTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp GGTGCCCAAGGCTATTCTCAGTCCTGGTCGTGTGGCCACCAGGCCAGACAGTGCCGGCGGCGTCCCGCATaGCCAAGGGCAGCATGGCAT +
Preference number: 4 (lower is better)
Translates to: GAQGYSQSWSCGHQARQCRRRPA*PRAAWH
Trigger: ATGCCATGCTGCCCTTGGGCATGCGGGACGCCGCCG...GCACTGTCTGGCCTGGTGGCCACACGACCAGGACTGAGAATAGCCTTGGGCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp GCCAGGGTCTTCTCCGGGAGAGGGGTGGAGGTGGACACAGGGCTGTCTCCGTGGCTCCACACAGTACGCTaGCTGAGTGCACGCCCACAC +
Preference number: 4 (lower is better)
Translates to: ARVFSGRGVEVDTGLSPWLHTVR*LSARPH
Trigger: GTGTGGGCGTGCACTCAGGCAGCGTACTGTGTGGAG...CCACGGAGACAGCCCTGTGTCCACCTCCACCCCTCTCCCGGAGAAGACCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp GCCAGGGTCTTCTCCGGGAGAGGGGTGGAGGTGGACACAGGGCTGTCTCCGTGGCCCTGGTACACCGCCTaGCTCCATGTGGTTAGCCAG +
Preference number: 4 (lower is better)
Translates to: ARVFSGRGVEVDTGLSPWPWYTA*LHVVSQ
Trigger: CTGGCTAACCACATGGAGGCAGGCGGTGTACCAGGG...CCACGGAGACAGCCCTGTGTCCACCTCCACCCCTCTCCCGGAGAAGACCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp GAGGAGGAAGAGGAGGAAGGTGATGCTATACGTGATGGCCAGAGCTGGGGGCCTGTGCCTCCCGGAACGTaGCCCGCAGGGCGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: EEEEEEGDAIRDGQSWGPVPPGT*PAGRAP
Trigger: TGGAGCGCGCCCTGCGGGCCACGTTCCGGGAGGCAC...AGGCCCCCAGCTCTGGCCATCACGTATAGCATCACCTTCCTCCTCTTCCTCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp GCCAGGGTCTTCTCCGGGAGAGGGGTGGAGGTGGACACAGGGCTGTCTCCGTGGGGCTATTCTCAGTCCTaGTCGTGTGGCCACCAGGCC +
Preference number: 4 (lower is better)
Translates to: ARVFSGRGVEVDTGLSPWGYSQS*SCGHQA
Trigger: GGCCTGGTGGCCACACGACCAGGACTGAGAATAGCC...CCACGGAGACAGCCCTGTGTCCACCTCCACCCCTCTCCCGGAGAAGACCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp GTCCAAGGGGCCCAGATAGAGGCGGACGATGAGGCATTCCGACAGCCAGGCATGAGGCCCAAGTGGGGCTaGTCCCAGGCGCTCACCACG +
Preference number: 4 (lower is better)
Translates to: VQGAQIEADDEAFRQPGMRPKWG*SQALTT
Trigger: CGTGGTGAGCGCCTGGGACCAGCCCCACTTGGGCCT...CATGCCTGGCTGTCGGAATGCCTCATCGTCCGCCTCTATCTGGGCCCCTTGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR GCA 90 bp GAGGAGGAAGAGGAGGAAGGTGATGCTATACGTGATGGCCAGAGCTGGGGGCCTCAGCGCTGCAGTCGCTaGTCCCGGGAAGCGAGGCCC +
Preference number: 4 (lower is better)
Translates to: EEEEEEGDAIRDGQSWGPQRCSR*SREARP
Trigger: GGGCCTCGCTTCCCGGGAGCAGCGACTGCAGCGCTG...AGGCCCCCAGCTCTGGCCATCACGTATAGCATCACCTTCCTCCTCTTCCTCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp GCCAGGGTCTTCTCCGGGAGAGGGGTGGAGGTGGACACAGGGCTGTCTCCGTGGGCACAGGAACAGCACTaGGTTTGCTGCCAACTGCGG +
Preference number: 4 (lower is better)
Translates to: ARVFSGRGVEVDTGLSPWAQEQH*VCCQLR
Trigger: CCGCAGTTGGCAGCAAACGCAGTGCTGTTCCTGTGC...CCACGGAGACAGCCCTGTGTCCACCTCCACCCCTCTCCCGGAGAAGACCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp CCTTCTCCCTGCCCCCATGTAGGCCTCCGCTTCCCTCCCACTTTGCCCTGTGGGGATGTGCACTCGCCCTaGTACACCGCCTGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: PSPCPHVGLRFPPTLPCGDVHSP*YTACLH
Trigger: ATGGAGGCAGGCGGTGTACCAGGGCGAGTGCACATC...CCCACAGGGCAAAGTGGGAGGGAAGCGGAGGCCTACATGGGGGCAGGGAGAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR CCA 90 bp GCCAGGGTCTTCTCCGGGAGAGGGGTGGAGGTGGACACAGGGCTGTCTCCGTGGGCCAGTGCAGCATCTTaGGGCCTTTCAGGACACACC +
Preference number: 4 (lower is better)
Translates to: ARVFSGRGVEVDTGLSPWASAAS*GLSGHT
Trigger: GGTGTGTCCTGAAAGGCCCCAAGATGCTGCACTGGC...CCACGGAGACAGCCCTGTGTCCACCTCCACCCCTCTCCCGGAGAAGACCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp GGGCTCCTTCAGCACTCCGGGCCTGAAGGGGCCATGGATCAGGGTGACCCCTTGTCCGACAGCCAGGCATaGGAGTGCAGGAAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: GLLQHSGPEGAMDQGDPLSDSQA*ECRKRE
Trigger: CTCCCTCTTCCTGCACTCCCATGCCTGGCTGTCGGA...CAAGGGGTCACCCTGATCCATGGCCCCTTCAGGCCCGGAGTGCTGAAGGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR TCA 90 bp GAGCAGCAGCAGCTTCAGCTCGAAGCTCATGTGCAGAAAGAGGGAGCAGGAGAGAGGGAGCCGGGGACCTaGTGGCGGAGTCACGCTCGC +
Preference number: 4 (lower is better)
Translates to: EQQQLQLEAHVQKEGAGEREPGT*WRSHAR
Trigger: GCGAGCGTGACTCCGCCATCAGGTCCCCGGCTCCCT...CTCTCCTGCTCCCTCTTTCTGCACATGAGCTTCGAGCTGAAGCTGCTGCTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR TCA 90 bp CCCAGGGCCACGGCAAATTCCACCATAGTGCCAAGGTGGCTGCAGCTCCGTTCATCACCACGCCCCCGGTaGACAGGAAGGCGTGGCCTA +
Preference number: 4 (lower is better)
Translates to: PRATANSTIVPRWLQLRSSPRPR*TGRRGL
Trigger: TAGGCCACGCCTTCCTGTTCACCGGGGGCGTGGTGA...TGAACGGAGCTGCAGCCACCTTGGCACTATGGTGGAATTTGCCGTGGCCCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR TCA 90 bp GAGGAGGAAGAGGAGGAAGGTGATGCTATACGTGATGGCCAGAGCTGGGGGCCTCAGCAGATGCGAGAGTaGGGAGGCGAGGCCCGCGAC +
Preference number: 4 (lower is better)
Translates to: EEEEEEGDAIRDGQSWGPQQMRE*GGEARD
Trigger: GTCGCGGGCCTCGCCTCCTCACTCTCGCATCTGCTG...AGGCCCCCAGCTCTGGCCATCACGTATAGCATCACCTTCCTCCTCTTCCTCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR TCA 90 bp AGCAGTGATGGACGCATCTTGAGGCCCTCAAGCGAGGACAGCAAGCCTCCTGCACAGCAGATGCGAGAGTaGGGAGGCGAGGCCCGCGAC +
Preference number: 4 (lower is better)
Translates to: SSDGRILRPSSEDSKPPAQQMRE*GGEARD
Trigger: GTCGCGGGCCTCGCCTCCTCACTCTCGCATCTGCTG...TGCAGGAGGCTTGCTGTCCTCGCTTGAGGGCCTCAAGATGCGTCCATCACTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR TCA 90 bp AGGAAGCCCAGCGTGCAGCAGTGCATGGAGTACTGTGGGGCCAGGCAGGGGTCAACACAGTACGCTGCCTaGGTGCACGCCCACACGCAT +
Preference number: 4 (lower is better)
Translates to: RKPSVQQCMEYCGARQGSTQYAA*VHAHTH
Trigger: ATGCGTGTGGGCGTGCACTCAGGCAGCGTACTGTGT...TGACCCCTGCCTGGCCCCACAGTACTCCATGCACTGCTGCACGCTGGGCTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR TCA 90 bp CCTTCTCCCTGCCCCCATGTAGGCCTCCGCTTCCCTCCCACTTTGCCCTGTGGGACTTTGCCCTGTGGGTaGTTCAGGTCGGTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: PSPCPHVGLRFPPTLPCGTLPCG*FRSVRP
Trigger: TGGCCTCACCGACCTGAATCACCCACAGGGCAAAGT...CCCACAGGGCAAAGTGGGAGGGAAGCGGAGGCCTACATGGGGGCAGGGAGAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR TCA 90 bp CTTCAGCACTCCGGGCCTGAAGGGGCCATGGATCAGGGTGACCCCTTGCTTTCCGGGAAGCCCAGCTCCTaGGTGTTCAGCCCCAACTCC +
Preference number: 4 (lower is better)
Translates to: LQHSGPEGAMDQGDPLLSGKPSS*VFSPNS
Trigger: GGAGTTGGGGCTGAACACTCAGGAGCTGGGCTTCCC...GGAAAGCAAGGGGTCACCCTGATCCATGGCCCCTTCAGGCCCGGAGTGCTGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR GCA 90 bp CCAATAACTCCAGCTACTACGGGTCCATGGTTCAACCCCACTCGCAGGCGGAAGCAGCGCTGCAGTCGCTaGTCCCGGGAAGCGAGGCCC +
Preference number: 4 (lower is better)
Translates to: PITPATTGPWFNPTRRRKQRCSR*SREARP
Trigger: GGGCCTCGCTTCCCGGGAGCAGCGACTGCAGCGCTG...CTTCCGCCTGCGAGTGGGGTTGAACCATGGACCCGTAGTAGCTGGAGTTATTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp AGCAGTGATGGACGCATCTTGAGGCCCTCAAGCGAGGACAGCAAGCCTCCTGCAGTGCAGGGAGCTGAGTaGCTCCCGGAACGTGGCCCG +
Preference number: 4 (lower is better)
Translates to: SSDGRILRPSSEDSKPPAVQGAE*LPERGP
Trigger: CGGGCCACGTTCCGGGAGGCACTCAGCTCCCTGCAC...TGCAGGAGGCTTGCTGTCCTCGCTTGAGGGCCTCAAGATGCGTCCATCACTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp CCTTCTCCCTGCCCCCATGTAGGCCTCCGCTTCCCTCCCACTTTGCCCTGTGGGAGGCCAGGACAGCTCTaGTGTATCCCATCTCACCCC +
Preference number: 4 (lower is better)
Translates to: PSPCPHVGLRFPPTLPCGRPGQL*CIPSHP
Trigger: GGGGTGAGATGGGATACAGCAGAGCTGTCCTGGCCT...CCCACAGGGCAAAGTGGGAGGGAAGCGGAGGCCTACATGGGGGCAGGGAGAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR CCA 90 bp GGTGCCCAAGGCTATTCTCAGTCCTGGTCGTGTGGCCACCAGGCCAGACAGTGCGCGCGCACAGCACAGTaGTCAGGAAGCTCGGGTCTG +
Preference number: 4 (lower is better)
Translates to: GAQGYSQSWSCGHQARQCARTAQ*SGSSGL
Trigger: CAGACCCGAGCTTCCTGACCACTGTGCTGTGCGCGC...GCACTGTCTGGCCTGGTGGCCACACGACCAGGACTGAGAATAGCCTTGGGCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp GTCCAAGGGGCCCAGATAGAGGCGGACGATGAGGCATTCCGACAGCCAGGCATGGTGAACAGGAAGGCGTaGCCTAGCGCTAGCAGCGCG +
Preference number: 4 (lower is better)
Translates to: VQGAQIEADDEAFRQPGMVNRKA*PSASSA
Trigger: CGCGCTGCTAGCGCTAGGCCACGCCTTCCTGTTCAC...CATGCCTGGCTGTCGGAATGCCTCATCGTCCGCCTCTATCTGGGCCCCTTGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp GCCAGGGTCTTCTCCGGGAGAGGGGTGGAGGTGGACACAGGGCTGTCTCCGTGGTCCATCAGCGCCTTGTaGTACACTCCTGCCACGTTC +
Preference number: 4 (lower is better)
Translates to: ARVFSGRGVEVDTGLSPWSISAL*YTPATF
Trigger: GAACGTGGCAGGAGTGTACCACAAGGCGCTGATGGA...CCACGGAGACAGCCCTGTGTCCACCTCCACCCCTCTCCCGGAGAAGACCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp CTTCAGCACTCCGGGCCTGAAGGGGCCATGGATCAGGGTGACCCCTTGCTTTCCGGAGAGGGGTGGAGGTaGACACAGGGCTGTCTCCGT +
Preference number: 4 (lower is better)
Translates to: LQHSGPEGAMDQGDPLLSGEGWR*TQGCLR
Trigger: ACGGAGACAGCCCTGTGTCCACCTCCACCCCTCTCC...GGAAAGCAAGGGGTCACCCTGATCCATGGCCCCTTCAGGCCCGGAGTGCTGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR CCA 90 bp GCCAGGGTCTTCTCCGGGAGAGGGGTGGAGGTGGACACAGGGCTGTCTCCGTGGCAAAGACAAGGAGGATaGTGGCGGTGCCCAAGGCTA +
Preference number: 4 (lower is better)
Translates to: ARVFSGRGVEVDTGLSPWQRQGG*WRCPRL
Trigger: TAGCCTTGGGCACCGCCACCATCCTCCTTGTCTTTG...CCACGGAGACAGCCCTGTGTCCACCTCCACCCCTCTCCCGGAGAAGACCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR TCA 90 bp CCAATAACTCCAGCTACTACGGGTCCATGGTTCAACCCCACTCGCAGGCGGAAGCAGCAGTGCAGGCCGTaGGTCCGGCTGTGGCCCAAG +
Preference number: 4 (lower is better)
Translates to: PITPATTGPWFNPTRRRKQQCRP*VRLWPK
Trigger: CTTGGGCCACAGCCGGACTCACGGCCTGCACTGCTG...CTTCCGCCTGCGAGTGGGGTTGAACCATGGACCCGTAGTAGCTGGAGTTATTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp GAGCAGCAGCAGCTTCAGCTCGAAGCTCATGTGCAGAAAGAGGGAGCAGGAGAGGGACGCGTCCAGCGCTaGAGTCGCTGCTCCCGGGAA +
Preference number: 4 (lower is better)
Translates to: EQQQLQLEAHVQKEGAGEGRVQR*SRCSRE
Trigger: TTCCCGGGAGCAGCGACTGCAGCGCTGGACGCGTCC...CTCTCCTGCTCCCTCTTTCTGCACATGAGCTTCGAGCTGAAGCTGCTGCTGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp CAAGGCTATTCTCAGTCCTGGTCGTGTGGCCACCAGGCCAGACAGTGCAGGCAGGCGTTTGCTGCCAACTaGGGCAGCAGTGCAGGCCGT +
Preference number: 4 (lower is better)
Translates to: QGYSQSWSCGHQARQCRQAFAAN*GSSAGR
Trigger: ACGGCCTGCACTGCTGCCGCAGTTGGCAGCAAACGC...CTGCCTGCACTGTCTGGCCTGGTGGCCACACGACCAGGACTGAGAATAGCCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp GTCCAAGGGGCCCAGATAGAGGCGGACGATGAGGCATTCCGACAGCCAGGCATGCAGCACTGCGTTTGCTaGCAACTGCGGCAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: VQGAQIEADDEAFRQPGMQHCVC*QLRQQC
Trigger: GCACTGCTGCCGCAGTTGGCAGCAAACGCAGTGCTG...CATGCCTGGCTGTCGGAATGCCTCATCGTCCGCCTCTATCTGGGCCCCTTGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp CCTTCTCCCTGCCCCCATGTAGGCCTCCGCTTCCCTCCCACTTTGCCCTGTGGGTCCTGCCTGCAGCCGTaGCATGATCTCTGCCTTCAT +
Preference number: 4 (lower is better)
Translates to: PSPCPHVGLRFPPTLPCGSCLQP*HDLCLH
Trigger: ATGAAGGCAGAGATCATGGCACGGCTGCAGGCAGGA...CCCACAGGGCAAAGTGGGAGGGAAGCGGAGGCCTACATGGGGGCAGGGAGAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR GCA 90 bp CAAGGCTATTCTCAGTCCTGGTCGTGTGGCCACCAGGCCAGACAGTGCAGGCAGGTCCACGCCAGTGGCTaGCCGCAGTTTCCTGATGGC +
Preference number: 4 (lower is better)
Translates to: QGYSQSWSCGHQARQCRQVHASG*PQFPDG
Trigger: GCCATCAGGAAACTGCGGGCAGCCACTGGCGTGGAC...CTGCCTGCACTGTCTGGCCTGGTGGCCACACGACCAGGACTGAGAATAGCCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
CDS-3UTR CCA 90 bp CGCATCTTGAGGCCCTCAAGCGAGGACAGCAAGCCTCCTGCAGTGCCCTTCTCAGCGCGCACAGCACAGTaGTCAGGAAGCTCGGGTCTG +
Preference number: 4 (lower is better)
Translates to: RILRPSSEDSKPPAVPFSARTAQ*SGSSGL
Trigger: CAGACCCGAGCTTCCTGACCACTGTGCTGTGCGCGC...TGAGAAGGGCACTGCAGGAGGCTTGCTGTCCTCGCTTGAGGGCCTCAAGATGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp CCTTCTCCCTGCCCCCATGTAGGCCTCCGCTTCCCTCCCACTTTGCCCTGTGGGTCCATCAGCGCCTTGTaGTACACTCCTGCCACGTTC +
Preference number: 4 (lower is better)
Translates to: PSPCPHVGLRFPPTLPCGSISAL*YTPATF
Trigger: GAACGTGGCAGGAGTGTACCACAAGGCGCTGATGGA...CCCACAGGGCAAAGTGGGAGGGAAGCGGAGGCCTACATGGGGGCAGGGAGAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR CCA 90 bp TGGGAAGAAGAACAGGCTGGTAATGGCCATGGCAAAGACAAGGAGGATGGTGGCGTGCCTCCCGGAACGTaGCCCGCAGGGCGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: WEEEQAGNGHGKDKEDGGVPPGT*PAGRAP
Trigger: TGGAGCGCGCCCTGCGGGCCACGTTCCGGGAGGCAC...GCCACCATCCTCCTTGTCTTTGCCATGGCCATTACCAGCCTGTTCTTCTTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp CAGCCTAGGGTAGCTGAAGGAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGGTGCCTCCCGGAACGTaGCCCGCAGGGCGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: QPRVAEGGPVRVKSVFRKVPPGT*PAGRAP
Trigger: TGGAGCGCGCCCTGCGGGCCACGTTCCGGGAGGCAC...CTTCCTGAACACAGACTTGACACGAACTGGACCTCCTTCAGCTACCCTAGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp CCCAGGGCCACGGCAAATTCCACCATAGTGCCAAGGTGGCTGCAGCTCCGTTCATCAGCACTCCGGGCCTaGAGTCCAAGGGGCCCAGAT +
Preference number: 4 (lower is better)
Translates to: PRATANSTIVPRWLQLRSSALRA*SPRGPD
Trigger: ATCTGGGCCCCTTGGACTCCAGGCCCGGAGTGCTGA...TGAACGGAGCTGCAGCCACCTTGGCACTATGGTGGAATTTGCCGTGGCCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
CDS-3UTR CCA 90 bp GCCAGGGTCTTCTCCGGGAGAGGGGTGGAGGTGGACACAGGGCTGTCTCCGTGGCATCCTGTCCAGAGGTaGCATTTAAGCCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: ARVFSGRGVEVDTGLSPWHPVQR*HLSLWL
Trigger: CAGCCACAGGCTTAAATGCCACCTCTGGACAGGATG...CCACGGAGACAGCCCTGTGTCCACCTCCACCCCTCTCCCGGAGAAGACCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR TCA 90 bp GAAGTCCAGGCGGCAGTAGTACTCATTCTGGCGAGCCAGGACAAGGAGGGTGAATCACCACGCCCCCGGTaGACAGGAAGGCGTGGCCTA +
Preference number: 4 (lower is better)
Translates to: EVQAAVVLILASQDKEGESPRPR*TGRRGL
Trigger: TAGGCCACGCCTTCCTGTTCACCGGGGGCGTGGTGA...TTCACCCTCCTTGTCCTGGCTCGCCAGAATGAGTACTACTGCCGCCTGGACTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
CDS-3UTR TCA 90 bp GAAGATGAAGAAGGAGATAGCACCCATCAGTTTGGGCTCCTTCAGCACTCCGGGGTCCAGCCGCCGGCGTaGGTGCAGGGAGCTGAGTGC +
Preference number: 4 (lower is better)
Translates to: EDEEGDSTHQFGLLQHSGVQPPA*VQGAEC
Trigger: GCACTCAGCTCCCTGCACTCACGCCGGCGGCTGGAC...CCCGGAGTGCTGAAGGAGCCCAAACTGATGGGTGCTATCTCCTTCTTCATCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR TCA 90 bp GAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGTAGGTGCAGAGCTGCCCTTGTCCAGCCGCCGGCGTaGGTGCAGGGAGCTGAGTGC +
Preference number: 4 (lower is better)
Translates to: EVQFVSSLCSGSRCRAALVQPPA*VQGAEC
Trigger: GCACTCAGCTCCCTGCACTCACGCCGGCGGCTGGAC...AAGGGCAGCTCTGCACCTACTTCCTGAACACAGACTTGACACGAACTGGACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR TCA 90 bp GTCCAAGGGGCCCAGATAGAGGCGGACGATGAGGCATTCCGACAGCCAGGCATGCCTGCAGCCGTGCCATaGTCTCTGCCTTCATCTCTC +
Preference number: 4 (lower is better)
Translates to: VQGAQIEADDEAFRQPGMPAAVP*SLPSSL
Trigger: GAGAGATGAAGGCAGAGATCATGGCACGGCTGCAGG...CATGCCTGGCTGTCGGAATGCCTCATCGTCCGCCTCTATCTGGGCCCCTTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR TCA 90 bp CCCAGGGCCACGGCAAATTCCACCATAGTGCCAAGGTGGCTGCAGCTCCGTTCACCATGCGCACGCAGTTaGTGGCATGGTCTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: PRATANSTIVPRWLQLRSPCARS*WHGLAV
Trigger: CACTGCCAGACCATGCCATCAACTGCGTGCGCATGG...TGAACGGAGCTGCAGCCACCTTGGCACTATGGTGGAATTTGCCGTGGCCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
CDS-3UTR TCA 90 bp CGCATCTTGAGGCCCTCAAGCGAGGACAGCAAGCCTCCTGCAGTGCCCTTCTCAGGTGATTCAGGTCGGTaGGGCCAGGACAGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: RILRPSSEDSKPPAVPFSGDSGR*GQDSSA
Trigger: AGCAGAGCTGTCCTGGCCTCACCGACCTGAATCACC...TGAGAAGGGCACTGCAGGAGGCTTGCTGTCCTCGCTTGAGGGCCTCAAGATGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR TCA 90 bp CAAGGCTATTCTCAGTCCTGGTCGTGTGGCCACCAGGCCAGACAGTGCAGGCAGGGCCATGGATCAGGGTaGCCCCTTGCTTTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: QGYSQSWSCGHQARQCRQGHGSG*PLAFPL
Trigger: AAGGGGGAAAGCAAGGGGTCACCCTGATCCATGGCC...CTGCCTGCACTGTCTGGCCTGGTGGCCACACGACCAGGACTGAGAATAGCCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR GCA 90 bp GTGCAGCAGTGCATGGAGTATGGGACACTGATGAGAGGCAGAGACCCAGGGAGCGCGTTTGCTGCCAACTaGGGCAGCAGTGCAGGCCGT +
Preference number: 4 (lower is better)
Translates to: VQQCMEYGTLMRGRDPGSAFAAN*GSSAGR
Trigger: ACGGCCTGCACTGCTGCCGCAGTTGGCAGCAAACGC...GCTCCCTGGGTCTCTGCCTCTCATCAGTGTCCCATACTCCATGCACTGCTGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
CDS-3UTR GCA 90 bp GTCCAAGGGGCCCAGATAGAGGCGGACGATGAGGCATTCCGACAGCCAGGCATGGAACAGCACTGCGTTTaGTGCCAACTGCGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: VQGAQIEADDEAFRQPGMEQHCV*CQLRQQ
Trigger: CTGCTGCCGCAGTTGGCAGCAAACGCAGTGCTGTTC...CATGCCTGGCTGTCGGAATGCCTCATCGTCCGCCTCTATCTGGGCCCCTTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp GTCCAAGGGGCCCAGATAGAGGCGGACGATGAGGCATTCCGACAGCCAGGCATGCCGTGCCATGATCTCTaGCTTCATCTCTCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: VQGAQIEADDEAFRQPGMPCHDL*LHLSGQ
Trigger: CTGGCCCGAGAGATGAAGGCAGAGATCATGGCACGG...CATGCCTGGCTGTCGGAATGCCTCATCGTCCGCCTCTATCTGGGCCCCTTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp CCCAGGGCCACGGCAAATTCCACCATAGTGCCAAGGTGGCTGCAGCTCCGTTCAGACCCCTGTCCTGCCTaGAGCCGTGCCATGATCTCT +
Preference number: 4 (lower is better)
Translates to: PRATANSTIVPRWLQLRSDPCPA*SRAMIS
Trigger: AGAGATCATGGCACGGCTGCAGGCAGGACAGGGGTC...TGAACGGAGCTGCAGCCACCTTGGCACTATGGTGGAATTTGCCGTGGCCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp CAAGGCTATTCTCAGTCCTGGTCGTGTGGCCACCAGGCCAGACAGTGCAGGCAGCTCCACACAGTACGCTaGCTGAGTGCACGCCCACAC +
Preference number: 4 (lower is better)
Translates to: QGYSQSWSCGHQARQCRQLHTVR*LSARPH
Trigger: GTGTGGGCGTGCACTCAGGCAGCGTACTGTGTGGAG...CTGCCTGCACTGTCTGGCCTGGTGGCCACACGACCAGGACTGAGAATAGCCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp CAAGGCTATTCTCAGTCCTGGTCGTGTGGCCACCAGGCCAGACAGTGCAGGCAGGGTCCCGATGCTCCATaGCTGCGTCCTCCACAGCAT +
Preference number: 4 (lower is better)
Translates to: QGYSQSWSCGHQARQCRQGPDAP*LRPPQH
Trigger: ATGCTGTGGAGGACGCAGGCATGGAGCATCGGGACC...CTGCCTGCACTGTCTGGCCTGGTGGCCACACGACCAGGACTGAGAATAGCCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp AATGGAGCGTTCCTCCACTCAGGGGGCTGTGGGCTTGGGCTGAGGAAGGGTGTGGGACAGCAAGCCTCCTaGAGTGCCCTTCTCATCCTC +
Preference number: 4 (lower is better)
Translates to: NGAFLHSGGCGLGLRKGVGQQAS*SALLIL
Trigger: GAGGATGAGAAGGGCACTGCAGGAGGCTTGCTGTCC...CACACCCTTCCTCAGCCCAAGCCCACAGCCCCCTGAGTGGAGGAACGCTCCATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR GCA 90 bp GTCCAAGGGGCCCAGATAGAGGCGGACGATGAGGCATTCCGACAGCCAGGCATGAGTGCAGGCAGCCAGTaGAGCATCTTGGGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: VQGAQIEADDEAFRQPGMSAGSQ*SILGPF
Trigger: GAAAGGCCCCAAGATGCTGCACTGGCTGCCTGCACT...CATGCCTGGCTGTCGGAATGCCTCATCGTCCGCCTCTATCTGGGCCCCTTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp GCCAGGGTCTTCTCCGGGAGAGGGGTGGAGGTGGACACAGGGCTGTCTCCGTGGGCTCCCAGGAGAGGTTaGAAATCATGGAGGACACAT +
Preference number: 4 (lower is better)
Translates to: ARVFSGRGVEVDTGLSPWAPRRG*KSWRTH
Trigger: ATGTGTCCTCCATGATTTCCAACCTCTCCTGGGAGC...CCACGGAGACAGCCCTGTGTCCACCTCCACCCCTCTCCCGGAGAAGACCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp CGCATCTTGAGGCCCTCAAGCGAGGACAGCAAGCCTCCTGCAGTGCCCTTCTCATCCGACAGCCAGGCATaGGAGTGCAGGAAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: RILRPSSEDSKPPAVPFSSDSQA*ECRKRE
Trigger: CTCCCTCTTCCTGCACTCCCATGCCTGGCTGTCGGA...TGAGAAGGGCACTGCAGGAGGCTTGCTGTCCTCGCTTGAGGGCCTCAAGATGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR TCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAAAGGGAGCCGGGGACCTaGTGGCGGAGTCACGCTCGC +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQREPGT*WRSHAR
Trigger: GCGAGCGTGACTCCGCCATCAGGTCCCCGGCTCCCT...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp CAGCCTAGGGTAGCTGAAGGAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGCAGCAGTGCAGGCCGTaGGTCCGGCTGTGGCCCAAG +
Preference number: 4 (lower is better)
Translates to: QPRVAEGGPVRVKSVFRKQQCRP*VRLWPK
Trigger: CTTGGGCCACAGCCGGACTCACGGCCTGCACTGCTG...CTTCCTGAACACAGACTTGACACGAACTGGACCTCCTTCAGCTACCCTAGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR TCA 90 bp TGGGAAGAAGAACAGGCTGGTAATGGCCATGGCAAAGACAAGGAGGATGGTGGCCAGCAGTGCAGGCCGTaGGTCCGGCTGTGGCCCAAG +
Preference number: 4 (lower is better)
Translates to: WEEEQAGNGHGKDKEDGGQQCRP*VRLWPK
Trigger: CTTGGGCCACAGCCGGACTCACGGCCTGCACTGCTG...GCCACCATCCTCCTTGTCTTTGCCATGGCCATTACCAGCCTGTTCTTCTTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR TCA 90 bp TCTTCTTCCACAGGAAGTCCAGGCGGCAGTAGTACTCATTCTGGCGAGCCAGGAGTGAGTGCAGGGAGCTaGGTGCCTCCCGGAACGTGG +
Preference number: 4 (lower is better)
Translates to: SSSTGSPGGSSTHSGEPGVSAGS*VPPGTW
Trigger: CCACGTTCCGGGAGGCACTCAGCTCCCTGCACTCAC...TCCTGGCTCGCCAGAATGAGTACTACTGCCGCCTGGACTTCCTGTGGAAGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
CDS-3UTR TCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAAGTCCAGCCGCCGGCGTaGGTGCAGGGAGCTGAGTGC +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQVQPPA*VQGAEC
Trigger: GCACTCAGCTCCCTGCACTCACGCCGGCGGCTGGAC...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp CCCAGGGCCACGGCAAATTCCACCATAGTGCCAAGGTGGCTGCAGCTCCGTTCACCTGCAGCCGTGCCATaGTCTCTGCCTTCATCTCTC +
Preference number: 4 (lower is better)
Translates to: PRATANSTIVPRWLQLRSPAAVP*SLPSSL
Trigger: GAGAGATGAAGGCAGAGATCATGGCACGGCTGCAGG...TGAACGGAGCTGCAGCCACCTTGGCACTATGGTGGAATTTGCCGTGGCCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR TCA 90 bp GAGCAGCAGCAGCTTCAGCTCGAAGCTCATGTGCAGAAAGAGGGAGCAGGAGAGGGCATGGTCTGGCAGTaGGAGTGGCAGCCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: EQQQLQLEAHVQKEGAGEGMVWQ*EWQPRD
Trigger: GTCTCTGGGCTGCCACTCTCACTGCCAGACCATGCC...CTCTCCTGCTCCCTCTTTCTGCACATGAGCTTCGAGCTGAAGCTGCTGCTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
CDS-3UTR TCA 90 bp CCCAGGGCCACGGCAAATTCCACCATAGTGCCAAGGTGGCTGCAGCTCCGTTCAGTGATGGACGCATCTTaGGGCCCTCAAGCGAGGACA +
Preference number: 4 (lower is better)
Translates to: PRATANSTIVPRWLQLRSVMDAS*GPQART
Trigger: TGTCCTCGCTTGAGGGCCTCAAGATGCGTCCATCAC...TGAACGGAGCTGCAGCCACCTTGGCACTATGGTGGAATTTGCCGTGGCCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR TCA 90 bp GTCCAAGGGGCCCAGATAGAGGCGGACGATGAGGCATTCCGACAGCCAGGCATGTCTTCTCCACCCCACTaGACTTGGGCTTGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: VQGAQIEADDEAFRQPGMSSPPH*TWAWRA
Trigger: TGCTCTCCAAGCCCAAGTTCAGTGGGGTGGAGAAGA...CATGCCTGGCTGTCGGAATGCCTCATCGTCCGCCTCTATCTGGGCCCCTTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR TCA 90 bp AATGGAGCGTTCCTCCACTCAGGGGGCTGTGGGCTTGGGCTGAGGAAGGGTGTGTCTTCTCCACCCCACTaGACTTGGGCTTGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: NGAFLHSGGCGLGLRKGVSSPPH*TWAWRA
Trigger: TGCTCTCCAAGCCCAAGTTCAGTGGGGTGGAGAAGA...CACACCCTTCCTCAGCCCAAGCCCACAGCCCCCTGAGTGGAGGAACGCTCCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR TCA 90 bp TGGGAAGAAGAACAGGCTGGTAATGGCCATGGCAAAGACAAGGAGGATGGTGGCCAGGAAGCTCGGGTCTaGGGTCAGCTCTGCCCGCGG +
Preference number: 4 (lower is better)
Translates to: WEEEQAGNGHGKDKEDGGQEARV*GQLCPR
Trigger: CCGCGGGCAGAGCTGACCTCAGACCCGAGCTTCCTG...GCCACCATCCTCCTTGTCTTTGCCATGGCCATTACCAGCCTGTTCTTCTTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR GCA 90 bp CAGCCTAGGGTAGCTGAAGGAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGCTGAGGTCAGCTCCCTaGCGCTGGCCCAGGCCACTG +
Preference number: 4 (lower is better)
Translates to: QPRVAEGGPVRVKSVFRKLRSAP*RWPRPL
Trigger: CAGTGGCCTGGGCCAGCGGCAGGGAGCTGACCTCAG...CTTCCTGAACACAGACTTGACACGAACTGGACCTCCTTCAGCTACCCTAGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
CDS-3UTR GCA 90 bp ATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCCAGCGCTGCAGTCGCTaGTCCCGGGAAGCGAGGCCC +
Preference number: 4 (lower is better)
Translates to: MGSRHPRVSLLRFLEGECQRCSR*SREARP
Trigger: GGGCCTCGCTTCCCGGGAGCAGCGACTGCAGCGCTG...GCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAACAGCGCTGCAGTCGCTaGTCCCGGGAAGCGAGGCCC +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQQRCSR*SREARP
Trigger: GGGCCTCGCTTCCCGGGAGCAGCGACTGCAGCGCTG...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp CAGCCTAGGGTAGCTGAAGGAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGGGACGCGTCCAGCGCTaGAGTCGCTGCTCCCGGGAA +
Preference number: 4 (lower is better)
Translates to: QPRVAEGGPVRVKSVFRKGRVQR*SRCSRE
Trigger: TTCCCGGGAGCAGCGACTGCAGCGCTGGACGCGTCC...CTTCCTGAACACAGACTTGACACGAACTGGACCTCCTTCAGCTACCCTAGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp AAGGAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGTAGGTGCAGAGCTGCCCGGCGGCGTCCCGCATaGCCAAGGGCAGCATGGCAT +
Preference number: 4 (lower is better)
Translates to: KEVQFVSSLCSGSRCRAARRRPA*PRAAWH
Trigger: ATGCCATGCTGCCCTTGGGCATGCGGGACGCCGCCG...GGCAGCTCTGCACCTACTTCCTGAACACAGACTTGACACGAACTGGACCTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp CCCAGGGCCACGGCAAATTCCACCATAGTGCCAAGGTGGCTGCAGCTCCGTTCAGAACAGCACTGCGTTTaGTGCCAACTGCGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PRATANSTIVPRWLQLRSEQHCV*CQLRQQ
Trigger: CTGCTGCCGCAGTTGGCAGCAAACGCAGTGCTGTTC...TGAACGGAGCTGCAGCCACCTTGGCACTATGGTGGAATTTGCCGTGGCCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp CGCATCTTGAGGCCCTCAAGCGAGGACAGCAAGCCTCCTGCAGTGCCCTTCTCAGCACAGGAACAGCACTaGGTTTGCTGCCAACTGCGG +
Preference number: 4 (lower is better)
Translates to: RILRPSSEDSKPPAVPFSAQEQH*VCCQLR
Trigger: CCGCAGTTGGCAGCAAACGCAGTGCTGTTCCTGTGC...TGAGAAGGGCACTGCAGGAGGCTTGCTGTCCTCGCTTGAGGGCCTCAAGATGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp CAGCCTAGGGTAGCTGAAGGAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGGTGCAGGGAGCTGAGTaGCTCCCGGAACGTGGCCCG +
Preference number: 4 (lower is better)
Translates to: QPRVAEGGPVRVKSVFRKVQGAE*LPERGP
Trigger: CGGGCCACGTTCCGGGAGGCACTCAGCTCCCTGCAC...CTTCCTGAACACAGACTTGACACGAACTGGACCTCCTTCAGCTACCCTAGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp GGTGCCCAAGGCTATTCTCAGTCCTGGTCGTGTGGCCACCAGGCCAGACAGTGCTCCTGCCTGCAGCCGTaGCATGATCTCTGCCTTCAT +
Preference number: 4 (lower is better)
Translates to: GAQGYSQSWSCGHQARQCSCLQP*HDLCLH
Trigger: ATGAAGGCAGAGATCATGGCACGGCTGCAGGCAGGA...GCACTGTCTGGCCTGGTGGCCACACGACCAGGACTGAGAATAGCCTTGGGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp GAGGAGGAAGAGGAGGAAGGTGATGCTATACGTGATGGCCAGAGCTGGGGGCCTGACCCCTGTCCTGCCTaGAGCCGTGCCATGATCTCT +
Preference number: 4 (lower is better)
Translates to: EEEEEEGDAIRDGQSWGPDPCPA*SRAMIS
Trigger: AGAGATCATGGCACGGCTGCAGGCAGGACAGGGGTC...AGGCCCCCAGCTCTGGCCATCACGTATAGCATCACCTTCCTCCTCTTCCTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp AGCAGTGATGGACGCATCTTGAGGCCCTCAAGCGAGGACAGCAAGCCTCCTGCAGACCCCTGTCCTGCCTaGAGCCGTGCCATGATCTCT +
Preference number: 4 (lower is better)
Translates to: SSDGRILRPSSEDSKPPADPCPA*SRAMIS
Trigger: AGAGATCATGGCACGGCTGCAGGCAGGACAGGGGTC...TGCAGGAGGCTTGCTGTCCTCGCTTGAGGGCCTCAAGATGCGTCCATCACTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp GGTGCCCAAGGCTATTCTCAGTCCTGGTCGTGTGGCCACCAGGCCAGACAGTGCTCGTACTGCCACTTCTaGAGCCCGATGACTCCACAC +
Preference number: 4 (lower is better)
Translates to: GAQGYSQSWSCGHQARQCSYCHF*SPMTPH
Trigger: GTGTGGAGTCATCGGGCTGCAGAAGTGGCAGTACGA...GCACTGTCTGGCCTGGTGGCCACACGACCAGGACTGAGAATAGCCTTGGGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp CTTCAGCACTCCGGGCCTGAAGGGGCCATGGATCAGGGTGACCCCTTGCTTTCCTCGTACTGCCACTTCTaGAGCCCGATGACTCCACAC +
Preference number: 4 (lower is better)
Translates to: LQHSGPEGAMDQGDPLLSSYCHF*SPMTPH
Trigger: GTGTGGAGTCATCGGGCTGCAGAAGTGGCAGTACGA...GGAAAGCAAGGGGTCACCCTGATCCATGGCCCCTTCAGGCCCGGAGTGCTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR GCA 90 bp GAGGAGGAAGAGGAGGAAGGTGATGCTATACGTGATGGCCAGAGCTGGGGGCCTCCCTGGTACACCGCCTaGCTCCATGTGGTTAGCCAG +
Preference number: 4 (lower is better)
Translates to: EEEEEEGDAIRDGQSWGPPWYTA*LHVVSQ
Trigger: CTGGCTAACCACATGGAGGCAGGCGGTGTACCAGGG...AGGCCCCCAGCTCTGGCCATCACGTATAGCATCACCTTCCTCCTCTTCCTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp GAGGAGGAAGAGGAGGAAGGTGATGCTATACGTGATGGCCAGAGCTGGGGGCCTGTAGCCCCTGTGATGTaGACTCGCCCTGGTACACCG +
Preference number: 4 (lower is better)
Translates to: EEEEEEGDAIRDGQSWGPVAPVM*TRPGTP
Trigger: CGGTGTACCAGGGCGAGTGCACATCACAGGGGCTAC...AGGCCCCCAGCTCTGGCCATCACGTATAGCATCACCTTCCTCCTCTTCCTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp CGCATCTTGAGGCCCTCAAGCGAGGACAGCAAGCCTCCTGCAGTGCCCTTCTCACCGATGCTCCATGCCTaGGTCCTCCACAGCATAAGC +
Preference number: 4 (lower is better)
Translates to: RILRPSSEDSKPPAVPFSPMLHA*VLHSIS
Trigger: GCTTATGCTGTGGAGGACGCAGGCATGGAGCATCGG...TGAGAAGGGCACTGCAGGAGGCTTGCTGTCCTCGCTTGAGGGCCTCAAGATGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp GTGCAGCAGTGCATGGAGTATGGGACACTGATGAGAGGCAGAGACCCAGGGAGCGGTCCCGATGCTCCATaGCTGCGTCCTCCACAGCAT +
Preference number: 4 (lower is better)
Translates to: VQQCMEYGTLMRGRDPGSGPDAP*LRPPQH
Trigger: ATGCTGTGGAGGACGCAGGCATGGAGCATCGGGACC...GCTCCCTGGGTCTCTGCCTCTCATCAGTGTCCCATACTCCATGCACTGCTGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
CDS-3UTR GCA 90 bp GAGGAGGAAGAGGAGGAAGGTGATGCTATACGTGATGGCCAGAGCTGGGGGCCTGGTCCCGATGCTCCATaGCTGCGTCCTCCACAGCAT +
Preference number: 4 (lower is better)
Translates to: EEEEEEGDAIRDGQSWGPGPDAP*LRPPQH
Trigger: ATGCTGTGGAGGACGCAGGCATGGAGCATCGGGACC...AGGCCCCCAGCTCTGGCCATCACGTATAGCATCACCTTCCTCCTCTTCCTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp CAAGGCTATTCTCAGTCCTGGTCGTGTGGCCACCAGGCCAGACAGTGCAGGCAGGGAGGATGGTGGCGGTaGCCAAGGCTATTCTCAGTC +
Preference number: 4 (lower is better)
Translates to: QGYSQSWSCGHQARQCRQGGWWR*PRLFSV
Trigger: GACTGAGAATAGCCTTGGGCACCGCCACCATCCTCC...CTGCCTGCACTGTCTGGCCTGGTGGCCACACGACCAGGACTGAGAATAGCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp GGTGCCCAAGGCTATTCTCAGTCCTGGTCGTGTGGCCACCAGGCCAGACAGTGCAGAGGAAGCCCAGCGTaGAGCAGTGCATGGAGTATG +
Preference number: 4 (lower is better)
Translates to: GAQGYSQSWSCGHQARQCRGSPA*SSAWSM
Trigger: CATACTCCATGCACTGCTGCACGCTGGGCTTCCTCT...GCACTGTCTGGCCTGGTGGCCACACGACCAGGACTGAGAATAGCCTTGGGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
CDS-3UTR GCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAAGATCCCCGAACTCACTaGCCGCGGCGCTGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQDPRTH*PRRWRS
Trigger: GCTGCGCCAGCGCCGCGGGCAGTGAGTTCGGGGATC...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418030.7
CDS-3UTR GCA 90 bp GTCCAAGGGGCCCAGATAGAGGCGGACGATGAGGCATTCCGACAGCCAGGCATGGCTTCCCTCCCACTTTaGCCTGTGGGTGATTCAGGT +
Preference number: 4 (lower is better)
Translates to: VQGAQIEADDEAFRQPGMASLPL*PVGDSG
Trigger: ACCTGAATCACCCACAGGGCAAAGTGGGAGGGAAGC...CATGCCTGGCTGTCGGAATGCCTCATCGTCCGCCTCTATCTGGGCCCCTTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR GCA 90 bp CGCATCTTGAGGCCCTCAAGCGAGGACAGCAAGCCTCCTGCAGTGCCCTTCTCAATCAGGGTGACCCCTTaGTTTCCCCCTTCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: RILRPSSEDSKPPAVPFSIRVTP*FPPSWP
Trigger: AGGCCAGGAAGGGGGAAAGCAAGGGGTCACCCTGAT...TGAGAAGGGCACTGCAGGAGGCTTGCTGTCCTCGCTTGAGGGCCTCAAGATGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR CCA 90 bp GAAGATGAAGAAGGAGATAGCACCCATCAGTTTGGGCTCCTTCAGCACTCCGGGTCAGCTCCCTGCCGCTaGCCCAGGCCACTGCGAGCA +
Preference number: 4 (lower is better)
Translates to: EDEEGDSTHQFGLLQHSGSAPCR*PRPLRA
Trigger: TGCTCGCAGTGGCCTGGGCCAGCGGCAGGGAGCTGA...CCCGGAGTGCTGAAGGAGCCCAAACTGATGGGTGCTATCTCCTTCTTCATCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
CDS-3UTR CCA 90 bp CCAATAACTCCAGCTACTACGGGTCCATGGTTCAACCCCACTCGCAGGCGGAAGGTGAACAGGAAGGCGTaGCCTAGCGCTAGCAGCGCG +
Preference number: 4 (lower is better)
Translates to: PITPATTGPWFNPTRRRKVNRKA*PSASSA
Trigger: CGCGCTGCTAGCGCTAGGCCACGCCTTCCTGTTCAC...CTTCCGCCTGCGAGTGGGGTTGAACCATGGACCCGTAGTAGCTGGAGTTATTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp GAGCAGCAGCAGCTTCAGCTCGAAGCTCATGTGCAGAAAGAGGGAGCAGGAGAGGTGAACAGGAAGGCGTaGCCTAGCGCTAGCAGCGCG +
Preference number: 4 (lower is better)
Translates to: EQQQLQLEAHVQKEGAGEVNRKA*PSASSA
Trigger: CGCGCTGCTAGCGCTAGGCCACGCCTTCCTGTTCAC...CTCTCCTGCTCCCTCTTTCTGCACATGAGCTTCGAGCTGAAGCTGCTGCTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATGTGCCTCCCGGAACGTaGCCCGCAGGGCGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNVPPGT*PAGRAP
Trigger: TGGAGCGCGCCCTGCGGGCCACGTTCCGGGAGGCAC...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp TGGAGGACACATTGGGAGCTTGGAAAGGGCAGTCTGATGATGTTGGGAAGAAGAGTGCCTCCCGGAACGTaGCCCGCAGGGCGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: WRTHWELGKGSLMMLGRRVPPGT*PAGRAP
Trigger: TGGAGCGCGCCCTGCGGGCCACGTTCCGGGAGGCAC...TCTTCTTCCCAACATCATCAGACTGCCCTTTCCAAGCTCCCAATGTGTCCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp GTCCAAGGGGCCCAGATAGAGGCGGACGATGAGGCATTCCGACAGCCAGGCATGCTCCTCCTCTGCCCGTaGATCGATGACCAGATAGGT +
Preference number: 4 (lower is better)
Translates to: VQGAQIEADDEAFRQPGMLLLCP*IDDQIG
Trigger: ACCTATCTGGTCATCGATCCACGGGCAGAGGAGGAG...CATGCCTGGCTGTCGGAATGCCTCATCGTCCGCCTCTATCTGGGCCCCTTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp AGCAGTGATGGACGCATCTTGAGGCCCTCAAGCGAGGACAGCAAGCCTCCTGCACGATCCAGGCTCCACTaGGTGCTGAAGGAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: SSDGRILRPSSEDSKPPARSRLH*VLKEAR
Trigger: CCTGGCTTCCTTCAGCACCCAGTGGAGCCTGGATCG...TGCAGGAGGCTTGCTGTCCTCGCTTGAGGGCCTCAAGATGCGTCCATCACTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp AGGAAGCCCAGCGTGCAGCAGTGCATGGAGTACTGTGGGGCCAGGCAGGGGTCAAGCTGCTCAATGACCTaGAAGAACTTGGCATCCCCG +
Preference number: 4 (lower is better)
Translates to: RKPSVQQCMEYCGARQGSSCSMT*KNLASP
Trigger: CGGGGATGCCAAGTTCTTCCAGGTCATTGAGCAGCT...TGACCCCTGCCTGGCCCCACAGTACTCCATGCACTGCTGCACGCTGGGCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR CCA 90 bp AGCAGTGATGGACGCATCTTGAGGCCCTCAAGCGAGGACAGCAAGCCTCCTGCATCAGTCCTGGTCGTGTaGCCACCAGGCCAGACAGTG +
Preference number: 4 (lower is better)
Translates to: SSDGRILRPSSEDSKPPASVLVV*PPGQTV
Trigger: CACTGTCTGGCCTGGTGGCCACACGACCAGGACTGA...TGCAGGAGGCTTGCTGTCCTCGCTTGAGGGCCTCAAGATGCGTCCATCACTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp AGCAGTGATGGACGCATCTTGAGGCCCTCAAGCGAGGACAGCAAGCCTCCTGCAGGCTATTCTCAGTCCTaGTCGTGTGGCCACCAGGCC +
Preference number: 4 (lower is better)
Translates to: SSDGRILRPSSEDSKPPAGYSQS*SCGHQA
Trigger: GGCCTGGTGGCCACACGACCAGGACTGAGAATAGCC...TGCAGGAGGCTTGCTGTCCTCGCTTGAGGGCCTCAAGATGCGTCCATCACTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp GAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGTAGGTGCAGAGCTGCCCTTAGCCGAAGGCCCAAGTaGGGCTGGTCCCAGGCGCTC +
Preference number: 4 (lower is better)
Translates to: EVQFVSSLCSGSRCRAALSRRPK*GWSQAL
Trigger: GAGCGCCTGGGACCAGCCCCACTTGGGCCTTCGGCT...AAGGGCAGCTCTGCACCTACTTCCTGAACACAGACTTGACACGAACTGGACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR CCA 90 bp CAAGGCTATTCTCAGTCCTGGTCGTGTGGCCACCAGGCCAGACAGTGCAGGCAGGGCCCAGGTCCTATCTaGGAGACAGGGGGCATCATA +
Preference number: 4 (lower is better)
Translates to: QGYSQSWSCGHQARQCRQGPGPI*ETGGII
Trigger: TATGATGCCCCCTGTCTCCCAGATAGGACCTGGGCC...CTGCCTGCACTGTCTGGCCTGGTGGCCACACGACCAGGACTGAGAATAGCCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR CCA 90 bp GAGCAGCAGCAGCTTCAGCTCGAAGCTCATGTGCAGAAAGAGGGAGCAGGAGAGGTGCATGGAGTACTGTaGGGCCAGGCAGGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: EQQQLQLEAHVQKEGAGEVHGVL*GQAGVR
Trigger: CCTGACCCCTGCCTGGCCCCACAGTACTCCATGCAC...CTCTCCTGCTCCCTCTTTCTGCACATGAGCTTCGAGCTGAAGCTGCTGCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR CCA 90 bp GGTGCCCAAGGCTATTCTCAGTCCTGGTCGTGTGGCCACCAGGCCAGACAGTGCTCCCACTTTGCCCTGTaGGTGATTCAGGTCGGTGAG +
Preference number: 4 (lower is better)
Translates to: GAQGYSQSWSCGHQARQCSHFAL*VIQVGE
Trigger: CTCACCGACCTGAATCACCCACAGGGCAAAGTGGGA...GCACTGTCTGGCCTGGTGGCCACACGACCAGGACTGAGAATAGCCTTGGGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
3UTR CAA 72 bp ACCAGGCCAGACAGTGCAGGCAGCCAGTGCAGCATCTaGGGGCCTTTCAGGACACACCTCATCAGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: TRPDSAGSQCSI*GPFRTHLIRSS
Trigger: AGAGGACCTGATGAGGTGTGTCCTGAAAGGCCCCAAGATGCTGCACTGGCTGCCTGCACTGTCTGGCCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR TCA 90 bp TCCGTTCAGCATCCTGTTGTGCATCCTGTCCAGAGGTGGCATTTAAGCCTGTGGTCACCACGCCCCCGGTaGACAGGAAGGCGTGGCCTA +
Preference number: 4 (lower is better)
Translates to: SVQHPVVHPVQRWHLSLWSPRPR*TGRRGL
Trigger: TAGGCCACGCCTTCCTGTTCACCGGGGGCGTGGTGA...CCACAGGCTTAAATGCCACCTCTGGACAGGATGCACAACAGGATGCTGAACGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR TCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAACAGCAGATGCGAGAGTaGGGAGGCGAGGCCCGCGAC +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQQQMRE*GGEARD
Trigger: GTCGCGGGCCTCGCCTCCTCACTCTCGCATCTGCTG...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp AAGGAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGTAGGTGCAGAGCTGCCGTGAGTGCAGGGAGCTaGGTGCCTCCCGGAACGTGG +
Preference number: 4 (lower is better)
Translates to: KEVQFVSSLCSGSRCRAAVSAGS*VPPGTW
Trigger: CCACGTTCCGGGAGGCACTCAGCTCCCTGCACTCAC...GGCAGCTCTGCACCTACTTCCTGAACACAGACTTGACACGAACTGGACCTCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR TCA 90 bp TCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGGTCCAGCCGCCGGCGTaGGTGCAGGGAGCTGAGTGC +
Preference number: 4 (lower is better)
Translates to: SMGSRHPRVSLLRFLEGEVQPPA*VQGAEC
Trigger: GCACTCAGCTCCCTGCACTCACGCCGGCGGCTGGAC...CTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp GAGGAGGAAGAGGAGGAAGGTGATGCTATACGTGATGGCCAGAGCTGGGGGCCTACTTCTGCAGCCCGATaGCTCCACACAGTACGCTGC +
Preference number: 4 (lower is better)
Translates to: EEEEEEGDAIRDGQSWGPTSAAR*LHTVRC
Trigger: GCAGCGTACTGTGTGGAGTCATCGGGCTGCAGAAGT...AGGCCCCCAGCTCTGGCCATCACGTATAGCATCACCTTCCTCCTCTTCCTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR TCA 90 bp GCCAGGGTCTTCTCCGGGAGAGGGGTGGAGGTGGACACAGGGCTGTCTCCGTGGCAGCAATTATCTCATTaGGCAGCCTCAGACACTCTA +
Preference number: 4 (lower is better)
Translates to: ARVFSGRGVEVDTGLSPWQQLSH*AASDTL
Trigger: TAGAGTGTCTGAGGCTGCTCAATGAGATAATTGCTG...CCACGGAGACAGCCCTGTGTCCACCTCCACCCCTCTCCCGGAGAAGACCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAACTGAGGTCAGCTCCCTaGCGCTGGCCCAGGCCACTG +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQLRSAP*RWPRPL
Trigger: CAGTGGCCTGGGCCAGCGGCAGGGAGCTGACCTCAG...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000644961.1
CDS-3UTR GCA 90 bp AATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAGCGCTGCAGTCGCTaGTCCCGGGAAGCGAGGCCC +
Preference number: 4 (lower is better)
Translates to: NGLQTPQSLFIEVLRRRVQRCSR*SREARP
Trigger: GGGCCTCGCTTCCCGGGAGCAGCGACTGCAGCGCTG...CACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp TGTCTCCTCAGTCACTTGGATTTTGCCAAGGACTCCTGTACTCTCCATGCGGCTGGACGCGTCCAGCGCTaGAGTCGCTGCTCCCGGGAA +
Preference number: 4 (lower is better)
Translates to: CLLSHLDFAKDSCTLHAAGRVQR*SRCSRE
Trigger: TTCCCGGGAGCAGCGACTGCAGCGCTGGACGCGTCC...AGCCGCATGGAGAGTACAGGAGTCCTTGGCAAAATCCAAGTGACTGAGGAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAACGGCGGCGTCCCGCATaGCCAAGGGCAGCATGGCAT +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQRRRPA*PRAAWH
Trigger: ATGCCATGCTGCCCTTGGGCATGCGGGACGCCGCCG...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp ATGAAGAAGGAGATAGCACCCATCAGTTTGGGCTCCTTCAGCACTCCGGGCCTGCCGAGGACCAGCAGATaGGAGAGTGAGGAGGCGAGG +
Preference number: 4 (lower is better)
Translates to: MKKEIAPISLGSFSTPGLPRTSR*ESEEAR
Trigger: CCTCGCCTCCTCACTCTCGCATCTGCTGGTCCTCGG...CAGGCCCGGAGTGCTGAAGGAGCCCAAACTGATGGGTGCTATCTCCTTCTTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAAGTGCAGGGAGCTGAGTaGCTCCCGGAACGTGGCCCG +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQVQGAE*LPERGP
Trigger: CGGGCCACGTTCCGGGAGGCACTCAGCTCCCTGCAC...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAAAGCCGCCGGCGTGAGTaGAGGGAGCTGAGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQSRRRE*RELSAS
Trigger: GGAGGCACTCAGCTCCCTGCACTCACGCCGGCGGCT...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp AGTGGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCGAGTTGAGCTGCTCAAGCCGCCGGCGTGAGTaGAGGGAGCTGAGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: SGLKSFDCFHCFCELSCSSRRRE*RELSAS
Trigger: GGAGGCACTCAGCTCCCTGCACTCACGCCGGCGGCT...TGAGCAGCTCAACTCGCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp GTCCAAGGGGCCCAGATAGAGGCGGACGATGAGGCATTCCGACAGCCAGGCATGAGAAGGTGTTCCTGGTaGTTCTTCTCGGTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: VQGAQIEADDEAFRQPGMRRCSW*FFSVSS
Trigger: GCTGGACACCGAGAAGAAGCACCAGGAACACCTTCT...CATGCCTGGCTGTCGGAATGCCTCATCGTCCGCCTCTATCTGGGCCCCTTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp CCCAGGGCCACGGCAAATTCCACCATAGTGCCAAGGTGGCTGCAGCTCCGTTCATCCTGCCTGCAGCCGTaGCATGATCTCTGCCTTCAT +
Preference number: 4 (lower is better)
Translates to: PRATANSTIVPRWLQLRSSCLQP*HDLCLH
Trigger: ATGAAGGCAGAGATCATGGCACGGCTGCAGGCAGGA...TGAACGGAGCTGCAGCCACCTTGGCACTATGGTGGAATTTGCCGTGGCCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp CCAATAACTCCAGCTACTACGGGTCCATGGTTCAACCCCACTCGCAGGCGGAAGGTAGCCCCTGTGATGTaGACTCGCCCTGGTACACCG +
Preference number: 4 (lower is better)
Translates to: PITPATTGPWFNPTRRRKVAPVM*TRPGTP
Trigger: CGGTGTACCAGGGCGAGTGCACATCACAGGGGCTAC...CTTCCGCCTGCGAGTGGGGTTGAACCATGGACCCGTAGTAGCTGGAGTTATTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp AGCAGTGATGGACGCATCTTGAGGCCCTCAAGCGAGGACAGCAAGCCTCCTGCACCGATGCTCCATGCCTaGGTCCTCCACAGCATAAGC +
Preference number: 4 (lower is better)
Translates to: SSDGRILRPSSEDSKPPAPMLHA*VLHSIS
Trigger: GCTTATGCTGTGGAGGACGCAGGCATGGAGCATCGG...TGCAGGAGGCTTGCTGTCCTCGCTTGAGGGCCTCAAGATGCGTCCATCACTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp GAGGAGGAAGAGGAGGAAGGTGATGCTATACGTGATGGCCAGAGCTGGGGGCCTGGACAGCAAGCCTCCTaGAGTGCCCTTCTCATCCTC +
Preference number: 4 (lower is better)
Translates to: EEEEEEGDAIRDGQSWGPGQQAS*SALLIL
Trigger: GAGGATGAGAAGGGCACTGCAGGAGGCTTGCTGTCC...AGGCCCCCAGCTCTGGCCATCACGTATAGCATCACCTTCCTCCTCTTCCTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp GGGCTCCTTCAGCACTCCGGGCCTGAAGGGGCCATGGATCAGGGTGACCCCTTGTTGAAGTCCTTCGACTaGTTCCACTGTTTCTGCGAG +
Preference number: 4 (lower is better)
Translates to: GLLQHSGPEGAMDQGDPLLKSFD*FHCFCE
Trigger: CTCGCAGAAACAGTGGAAGCAGTCGAAGGACTTCAA...CAAGGGGTCACCCTGATCCATGGCCCCTTCAGGCCCGGAGTGCTGAAGGAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR GCA 90 bp GAGGAGGAAGAGGAGGAAGGTGATGCTATACGTGATGGCCAGAGCTGGGGGCCTAGTGCAGGCAGCCAGTaGAGCATCTTGGGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: EEEEEEGDAIRDGQSWGPSAGSQ*SILGPF
Trigger: GAAAGGCCCCAAGATGCTGCACTGGCTGCCTGCACT...AGGCCCCCAGCTCTGGCCATCACGTATAGCATCACCTTCCTCCTCTTCCTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp AGCAGTGATGGACGCATCTTGAGGCCCTCAAGCGAGGACAGCAAGCCTCCTGCACCCAGCGTGCAGCAGTaGATGGAGTATGGGACACTG +
Preference number: 4 (lower is better)
Translates to: SSDGRILRPSSEDSKPPAPSVQQ*MEYGTL
Trigger: CAGTGTCCCATACTCCATGCACTGCTGCACGCTGGG...TGCAGGAGGCTTGCTGTCCTCGCTTGAGGGCCTCAAGATGCGTCCATCACTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
CDS-3UTR GCA 90 bp CAAGGCTATTCTCAGTCCTGGTCGTGTGGCCACCAGGCCAGACAGTGCAGGCAGAGAGGAAGCCCAGCGTaGAGCAGTGCATGGAGTACT +
Preference number: 4 (lower is better)
Translates to: QGYSQSWSCGHQARQCRQRGSPA*SSAWST
Trigger: AGTACTCCATGCACTGCTGCACGCTGGGCTTCCTCT...CTGCCTGCACTGTCTGGCCTGGTGGCCACACGACCAGGACTGAGAATAGCCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR CCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATGCTGGCGCAGCGGAGTaGGCTAGGTCCGGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNAGAAE*ARSGEG
Trigger: TCCCTCCCCGGACCTAGCCCACTCCGCTGCGCCAGC...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp CTGAAGTACAGTGTCAGTGGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCGCTGGCGCAGCGGAGTaGGCTAGGTCCGGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: LKYSVSGLKSFDCFHCFCAGAAE*ARSGEG
Trigger: TCCCTCCCCGGACCTAGCCCACTCCGCTGCGCCAGC...GCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACTGACACTGTACTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR CCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATCAGCTCCCTGCCGCTaGCCCAGGCCACTGCGAGCA +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQSAPCR*PRPLRA
Trigger: TGCTCGCAGTGGCCTGGGCCAGCGGCAGGGAGCTGA...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000644961.1
CDS-3UTR CCA 90 bp CCAATAACTCCAGCTACTACGGGTCCATGGTTCAACCCCACTCGCAGGCGGAAGTCTCCGTGGCTCAGGTaGGCAAAAGGCTTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: PITPATTGPWFNPTRRRKSPWLR*AKGLAA
Trigger: CGCAGCCAAGCCTTTTGCCCACCTGAGCCACGGAGA...CTTCCGCCTGCGAGTGGGGTTGAACCATGGACCCGTAGTAGCTGGAGTTATTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp CCAATAACTCCAGCTACTACGGGTCCATGGTTCAACCCCACTCGCAGGCGGAAGTCCGACAGCCAGGCATaGGAGTGCAGGAAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: PITPATTGPWFNPTRRRKSDSQA*ECRKRE
Trigger: CTCCCTCTTCCTGCACTCCCATGCCTGGCTGTCGGA...CTTCCGCCTGCGAGTGGGGTTGAACCATGGACCCGTAGTAGCTGGAGTTATTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp GTCCAAGGGGCCCAGATAGAGGCGGACGATGAGGCATTCCGACAGCCAGGCATGCATCCTGTCCAGAGGTaGCATTTAAGCCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: VQGAQIEADDEAFRQPGMHPVQR*HLSLWL
Trigger: CAGCCACAGGCTTAAATGCCACCTCTGGACAGGATG...CATGCCTGGCTGTCGGAATGCCTCATCGTCCGCCTCTATCTGGGCCCCTTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp AGCAGTGATGGACGCATCTTGAGGCCCTCAAGCGAGGACAGCAAGCCTCCTGCAGCTACTACGGGTCCATaGTTCAACCCCACTCGCAGG +
Preference number: 4 (lower is better)
Translates to: SSDGRILRPSSEDSKPPAATTGP*FNPTRR
Trigger: CCTGCGAGTGGGGTTGAACCATGGACCCGTAGTAGC...TGCAGGAGGCTTGCTGTCCTCGCTTGAGGGCCTCAAGATGCGTCCATCACTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp TCCGTTCAGCATCCTGTTGTGCATCCTGTCCAGAGGTGGCATTTAAGCCTGTGGCCACTCAGGGGGCTGTaGGCTTGGGCTGAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: SVQHPVVHPVQRWHLSLWPLRGL*AWAEEG
Trigger: CCCTTCCTCAGCCCAAGCCCACAGCCCCCTGAGTGG...CCACAGGCTTAAATGCCACCTCTGGACAGGATGCACAACAGGATGCTGAACGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR TCA 90 bp GACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGAGGGAGCCGGGGACCTaGTGGCGGAGTCACGCTCGC +
Preference number: 4 (lower is better)
Translates to: DINGLQTPQSLFIEVLRRREPGT*WRSHAR
Trigger: GCGAGCGTGACTCCGCCATCAGGTCCCCGGCTCCCT...CCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp ATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAAGGGAGCCGGGGACCTaGTGGCGGAGTCACGCTCGC +
Preference number: 4 (lower is better)
Translates to: INGLQTPQSLFIEVLRRRREPGT*WRSHAR
Trigger: GCGAGCGTGACTCCGCCATCAGGTCCCCGGCTCCCT...TCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATCAGCAGATGCGAGAGTaGGGAGGCGAGGCCCGCGAC +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNQQMRE*GGEARD
Trigger: GTCGCGGGCCTCGCCTCCTCACTCTCGCATCTGCTG...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp GGTGCAGGCTTCATAGTATTTGAAGGCGGGGATTGCAGAGAGTCGGTACTCTTTCAGCAGATGCGAGAGTaGGGAGGCGAGGCCCGCGAC +
Preference number: 4 (lower is better)
Translates to: GAGFIVFEGGDCRESVLFQQMRE*GGEARD
Trigger: GTCGCGGGCCTCGCCTCCTCACTCTCGCATCTGCTG...AAAGAGTACCGACTCTCTGCAATCCCCGCCTTCAAATACTATGAAGCCTGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR TCA 90 bp TCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGCAGCAGATGCGAGAGTaGGGAGGCGAGGCCCGCGAC +
Preference number: 4 (lower is better)
Translates to: SMGSRHPRVSLLRFLEGEQQMRE*GGEARD
Trigger: GTCGCGGGCCTCGCCTCCTCACTCTCGCATCTGCTG...CTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp TCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGCAGCAGTGCAGGCCGTaGGTCCGGCTGTGGCCCAAG +
Preference number: 4 (lower is better)
Translates to: SMGSRHPRVSLLRFLEGEQQCRP*VRLWPK
Trigger: CTTGGGCCACAGCCGGACTCACGGCCTGCACTGCTG...CTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATCAGCAGTGCAGGCCGTaGGTCCGGCTGTGGCCCAAG +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNQQCRP*VRLWPK
Trigger: CTTGGGCCACAGCCGGACTCACGGCCTGCACTGCTG...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAAGTGAGTGCAGGGAGCTaGGTGCCTCCCGGAACGTGG +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQVSAGS*VPPGTW
Trigger: CCACGTTCCGGGAGGCACTCAGCTCCCTGCACTCAC...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp CAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATCTCAGGTCCAGCCGCCGGCGTaGGTGCAGGGAGCTGAGTGC +
Preference number: 4 (lower is better)
Translates to: QTPQSLFIEVLRRRVQSQVQPPA*VQGAEC
Trigger: GCACTCAGCTCCCTGCACTCACGCCGGCGGCTGGAC...CTGAGATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR TCA 90 bp AGGAGCAGCAGCAGCTTCAGCTCGAAGCTCATGTGCAGAAAGAGGGAGCAGGAGGTGATGGACGCATCTTaGGGCCCTCAAGCGAGGACA +
Preference number: 4 (lower is better)
Translates to: RSSSSFSSKLMCRKREQEVMDAS*GPQART
Trigger: TGTCCTCGCTTGAGGGCCTCAAGATGCGTCCATCAC...CTCCTGCTCCCTCTTTCTGCACATGAGCTTCGAGCTGAAGCTGCTGCTGCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR TCA 90 bp CTTCAGCACTCCGGGCCTGAAGGGGCCATGGATCAGGGTGACCCCTTGCTTTCCCCATCTCCTTCTCTCTaGAGTACAGTGTCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: LQHSGPEGAMDQGDPLLSPSPSL*STVSVG
Trigger: ACCCACTGACACTGTACTTCAGAGAGAAGGAGATGG...GGAAAGCAAGGGGTCACCCTGATCCATGGCCCCTTCAGGCCCGGAGTGCTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR TCA 90 bp ATGAAGAAGGAGATAGCACCCATCAGTTTGGGCTCCTTCAGCACTCCGGGCCTGGATAGAGGCGGACGATaGGGCATTCCGACAGCCAGG +
Preference number: 4 (lower is better)
Translates to: MKKEIAPISLGSFSTPGLDRGGR*GIPTAR
Trigger: CCTGGCTGTCGGAATGCCTCATCGTCCGCCTCTATC...CAGGCCCGGAGTGCTGAAGGAGCCCAAACTGATGGGTGCTATCTCCTTCTTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR TCA 90 bp CCCAGGGCCACGGCAAATTCCACCATAGTGCCAAGGTGGCTGCAGCTCCGTTCACAGAGTAGAACTCCTTaGAGTCTGGGACTGAGGCGA +
Preference number: 4 (lower is better)
Translates to: PRATANSTIVPRWLQLRSQSRTP*SLGLRR
Trigger: TCGCCTCAGTCCCAGACTTCAAGGAGTTCTACTCTG...TGAACGGAGCTGCAGCCACCTTGGCACTATGGTGGAATTTGCCGTGGCCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR TCA 90 bp CCTTCTCCCTGCCCCCATGTAGGCCTCCGCTTCCCTCCCACTTTGCCCTGTGGGCTAGGCCCTCATGATTaGTGTTGGATTCAGAGTAGA +
Preference number: 4 (lower is better)
Translates to: PSPCPHVGLRFPPTLPCGLGPHD*CWIQSR
Trigger: TCTACTCTGAATCCAACATCAATCATGAGGGCCTAG...CCCACAGGGCAAAGTGGGAGGGAAGCGGAGGCCTACATGGGGGCAGGGAGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR TCA 90 bp AGCAGTGATGGACGCATCTTGAGGCCCTCAAGCGAGGACAGCAAGCCTCCTGCATCTTCTCCACCCCACTaGACTTGGGCTTGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: SSDGRILRPSSEDSKPPASSPPH*TWAWRA
Trigger: TGCTCTCCAAGCCCAAGTTCAGTGGGGTGGAGAAGA...TGCAGGAGGCTTGCTGTCCTCGCTTGAGGGCCTCAAGATGCGTCCATCACTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR TCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATCCGGCGGGCCCCACCTaGGCTTTTCTCACCCGCTCA +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNPAGPT*AFLTRS
Trigger: TGAGCGGGTGAGAAAAGCTCAGGTGGGGCCCGCCGG...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000418030.7
CDS-3UTR TCA 90 bp AGGAGCAGCAGCAGCTTCAGCTCGAAGCTCATGTGCAGAAAGAGGGAGCAGGAGACTTTGCCCTGTGGGTaGTTCAGGTCGGTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: RSSSSFSSKLMCRKREQETLPCG*FRSVRP
Trigger: TGGCCTCACCGACCTGAATCACCCACAGGGCAAAGT...CTCCTGCTCCCTCTTTCTGCACATGAGCTTCGAGCTGAAGCTGCTGCTGCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR TCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATCAGCACTCCGGGCCTaGAGGGGCCATGGATCAGGG +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQSALRA*RGHGSG
Trigger: CCCTGATCCATGGCCCCTTCAGGCCCGGAGTGCTGA...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR TCA 90 bp GAGCAGCAGCAGCTTCAGCTCGAAGCTCATGTGCAGAAAGAGGGAGCAGGAGAGTCAGCCCCAACTCCATaGTGCCTGAAACCACCCCCA +
Preference number: 4 (lower is better)
Translates to: EQQQLQLEAHVQKEGAGESAPTP*CLKPPP
Trigger: TGGGGGTGGTTTCAGGCATCATGGAGTTGGGGCTGA...CTCTCCTGCTCCCTCTTTCTGCACATGAGCTTCGAGCTGAAGCTGCTGCTGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR TCA 90 bp AAGGAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGTAGGTGCAGAGCTGCCGGGAAGCCCAGCTCCTaGGTGTTCAGCCCCAACTCC +
Preference number: 4 (lower is better)
Translates to: KEVQFVSSLCSGSRCRAAGKPSS*VFSPNS
Trigger: GGAGTTGGGGCTGAACACTCAGGAGCTGGGCTTCCC...GGCAGCTCTGCACCTACTTCCTGAACACAGACTTGACACGAACTGGACCTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR GCA 90 bp GGTGCAGGCTTCATAGTATTTGAAGGCGGGGATTGCAGAGAGTCGGTACTCTTTCTGAGGTCAGCTCCCTaGCGCTGGCCCAGGCCACTG +
Preference number: 4 (lower is better)
Translates to: GAGFIVFEGGDCRESVLFLRSAP*RWPRPL
Trigger: CAGTGGCCTGGGCCAGCGGCAGGGAGCTGACCTCAG...AAAGAGTACCGACTCTCTGCAATCCCCGCCTTCAAATACTATGAAGCCTGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
CDS-3UTR GCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATGGACGCGTCCAGCGCTaGAGTCGCTGCTCCCGGGAA +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNGRVQR*SRCSRE
Trigger: TTCCCGGGAGCAGCGACTGCAGCGCTGGACGCGTCC...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp TCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGCGGCGGCGTCCCGCATaGCCAAGGGCAGCATGGCAT +
Preference number: 4 (lower is better)
Translates to: SMGSRHPRVSLLRFLEGERRRPA*PRAAWH
Trigger: ATGCCATGCTGCCCTTGGGCATGCGGGACGCCGCCG...CTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp AATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCGGCGGCGTCCCGCATaGCCAAGGGCAGCATGGCAT +
Preference number: 4 (lower is better)
Translates to: NGLQTPQSLFIEVLRRRVRRRPA*PRAAWH
Trigger: ATGCCATGCTGCCCTTGGGCATGCGGGACGCCGCCG...CACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp CAGCCTAGGGTAGCTGAAGGAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGGCGTTTGCTGCCAACTaGGGCAGCAGTGCAGGCCGT +
Preference number: 4 (lower is better)
Translates to: QPRVAEGGPVRVKSVFRKAFAAN*GSSAGR
Trigger: ACGGCCTGCACTGCTGCCGCAGTTGGCAGCAAACGC...CTTCCTGAACACAGACTTGACACGAACTGGACCTCCTTCAGCTACCCTAGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp CTGAAGTACAGTGTCAGTGGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCAGCCGCCGGCGTGAGTaGAGGGAGCTGAGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: LKYSVSGLKSFDCFHCFCSRRRE*RELSAS
Trigger: GGAGGCACTCAGCTCCCTGCACTCACGCCGGCGGCT...GCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACTGACACTGTACTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp TCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGAGCCGCCGGCGTGAGTaGAGGGAGCTGAGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: SMGSRHPRVSLLRFLEGESRRRE*RELSAS
Trigger: GGAGGCACTCAGCTCCCTGCACTCACGCCGGCGGCT...CTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp AGGAGCAGCAGCAGCTTCAGCTCGAAGCTCATGTGCAGAAAGAGGGAGCAGGAGCCGTGCCATGATCTCTaGCTTCATCTCTCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: RSSSSFSSKLMCRKREQEPCHDL*LHLSGQ
Trigger: CTGGCCCGAGAGATGAAGGCAGAGATCATGGCACGG...CTCCTGCTCCCTCTTTCTGCACATGAGCTTCGAGCTGAAGCTGCTGCTGCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp GAGCAGCAGCAGCTTCAGCTCGAAGCTCATGTGCAGAAAGAGGGAGCAGGAGAGAGTACGCTGCCTGAGTaGACGCCCACACGCATGTTG +
Preference number: 4 (lower is better)
Translates to: EQQQLQLEAHVQKEGAGESTLPE*TPTRML
Trigger: CAACATGCGTGTGGGCGTGCACTCAGGCAGCGTACT...CTCTCCTGCTCCCTCTTTCTGCACATGAGCTTCGAGCTGAAGCTGCTGCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp GTGCAGCAGTGCATGGAGTATGGGACACTGATGAGAGGCAGAGACCCAGGGAGCTCGTACTGCCACTTCTaGAGCCCGATGACTCCACAC +
Preference number: 4 (lower is better)
Translates to: VQQCMEYGTLMRGRDPGSSYCHF*SPMTPH
Trigger: GTGTGGAGTCATCGGGCTGCAGAAGTGGCAGTACGA...GCTCCCTGGGTCTCTGCCTCTCATCAGTGTCCCATACTCCATGCACTGCTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
CDS-3UTR GCA 90 bp TCTTCTTCCACAGGAAGTCCAGGCGGCAGTAGTACTCATTCTGGCGAGCCAGGACCCTGGTACACCGCCTaGCTCCATGTGGTTAGCCAG +
Preference number: 4 (lower is better)
Translates to: SSSTGSPGGSSTHSGEPGPWYTA*LHVVSQ
Trigger: CTGGCTAACCACATGGAGGCAGGCGGTGTACCAGGG...TCCTGGCTCGCCAGAATGAGTACTACTGCCGCCTGGACTTCCTGTGGAAGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
CDS-3UTR GCA 90 bp AGGAGCAGCAGCAGCTTCAGCTCGAAGCTCATGTGCAGAAAGAGGGAGCAGGAGCCGATGCTCCATGCCTaGGTCCTCCACAGCATAAGC +
Preference number: 4 (lower is better)
Translates to: RSSSSFSSKLMCRKREQEPMLHA*VLHSIS
Trigger: GCTTATGCTGTGGAGGACGCAGGCATGGAGCATCGG...CTCCTGCTCCCTCTTTCTGCACATGAGCTTCGAGCTGAAGCTGCTGCTGCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp AGGAGCAGCAGCAGCTTCAGCTCGAAGCTCATGTGCAGAAAGAGGGAGCAGGAGCTCATCCTCCTCCTCTaGCCGTGGATCGATGACCAG +
Preference number: 4 (lower is better)
Translates to: RSSSSFSSKLMCRKREQELILLL*PWIDDQ
Trigger: CTGGTCATCGATCCACGGGCAGAGGAGGAGGATGAG...CTCCTGCTCCCTCTTTCTGCACATGAGCTTCGAGCTGAAGCTGCTGCTGCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp CCAATAACTCCAGCTACTACGGGTCCATGGTTCAACCCCACTCGCAGGCGGAAGCTCATCCTCCTCCTCTaGCCGTGGATCGATGACCAG +
Preference number: 4 (lower is better)
Translates to: PITPATTGPWFNPTRRRKLILLL*PWIDDQ
Trigger: CTGGTCATCGATCCACGGGCAGAGGAGGAGGATGAG...CTTCCGCCTGCGAGTGGGGTTGAACCATGGACCCGTAGTAGCTGGAGTTATTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp CAAGGCTATTCTCAGTCCTGGTCGTGTGGCCACCAGGCCAGACAGTGCAGGCAGTTCAGCATCCTGTTGTaGATCCTGTCCAGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: QGYSQSWSCGHQARQCRQFSILL*ILSRGG
Trigger: GCCACCTCTGGACAGGATGCACAACAGGATGCTGAA...CTGCCTGCACTGTCTGGCCTGGTGGCCACACGACCAGGACTGAGAATAGCCTTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATTTTTCAGGCCCTCCCTaGGGCCTCCCAGCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNFSGPP*GLPARS
Trigger: GGAGCGGGCTGGGAGGCCGCAGGGAGGGCCTGAAAA...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418030.7
CDS-3UTR GCA 90 bp ATGAAGAAGGAGATAGCACCCATCAGTTTGGGCTCCTTCAGCACTCCGGGCCTGGTCCACGCCAGTGGCTaGCCGCAGTTTCCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: MKKEIAPISLGSFSTPGLVHASG*PQFPWQ
Trigger: TTGCCAAGGAAACTGCGGGCAGCCACTGGCGTGGAC...CAGGCCCGGAGTGCTGAAGGAGCCCAAACTGATGGGTGCTATCTCCTTCTTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR CCA 90 bp ACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGCTGGCGCAGCGGAGTaGGCTAGGTCCGGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: TSMGSRHPRVSLLRFLEGAGAAE*ARSGEG
Trigger: TCCCTCCCCGGACCTAGCCCACTCCGCTGCGCCAGC...GCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp TATTTGAAGGCGGGGATTGCAGAGAGTCGGTACTCTTTCTCCATCTCCTTCTCTGCTGGCGCAGCGGAGTaGGCTAGGTCCGGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: YLKAGIAESRYSFSISFSAGAAE*ARSGEG
Trigger: TCCCTCCCCGGACCTAGCCCACTCCGCTGCGCCAGC...AGAGAAGGAGATGGAGAAAGAGTACCGACTCTCTGCAATCCCCGCCTTCAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR CCA 90 bp AAGGAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGTAGGTGCAGAGCTGCCGTGAACAGGAAGGCGTaGCCTAGCGCTAGCAGCGCG +
Preference number: 4 (lower is better)
Translates to: KEVQFVSSLCSGSRCRAAVNRKA*PSASSA
Trigger: CGCGCTGCTAGCGCTAGGCCACGCCTTCCTGTTCAC...GGCAGCTCTGCACCTACTTCCTGAACACAGACTTGACACGAACTGGACCTCCTT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp TCTTCTTCCACAGGAAGTCCAGGCGGCAGTAGTACTCATTCTGGCGAGCCAGGATCTCCGTGGCTCAGGTaGGCAAAAGGCTTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: SSSTGSPGGSSTHSGEPGSPWLR*AKGLAA
Trigger: CGCAGCCAAGCCTTTTGCCCACCTGAGCCACGGAGA...TCCTGGCTCGCCAGAATGAGTACTACTGCCGCCTGGACTTCCTGTGGAAGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
CDS-3UTR CCA 90 bp ATGAAGAAGGAGATAGCACCCATCAGTTTGGGCTCCTTCAGCACTCCGGGCCTGCGATCCAGGCTCCACTaGGTGCTGAAGGAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: MKKEIAPISLGSFSTPGLRSRLH*VLKEAR
Trigger: CCTGGCTTCCTTCAGCACCCAGTGGAGCCTGGATCG...CAGGCCCGGAGTGCTGAAGGAGCCCAAACTGATGGGTGCTATCTCCTTCTTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp TCTTCTTCCACAGGAAGTCCAGGCGGCAGTAGTACTCATTCTGGCGAGCCAGGAGGCTATTCTCAGTCCTaGTCGTGTGGCCACCAGGCC +
Preference number: 4 (lower is better)
Translates to: SSSTGSPGGSSTHSGEPGGYSQS*SCGHQA
Trigger: GGCCTGGTGGCCACACGACCAGGACTGAGAATAGCC...TCCTGGCTCGCCAGAATGAGTACTACTGCCGCCTGGACTTCCTGTGGAAGAAGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
CDS-3UTR CCA 90 bp CAAGGCTATTCTCAGTCCTGGTCGTGTGGCCACCAGGCCAGACAGTGCAGGCAGGCAGTGCATGGAGTATaGGACACTGATGAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: QGYSQSWSCGHQARQCRQAVHGV*DTDERQ
Trigger: CTGCCTCTCATCAGTGTCCCATACTCCATGCACTGC...CTGCCTGCACTGTCTGGCCTGGTGGCCACACGACCAGGACTGAGAATAGCCTTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
CDS-3UTR CCA 90 bp GGTGCCCAAGGCTATTCTCAGTCCTGGTCGTGTGGCCACCAGGCCAGACAGTGCTCATATTGCGGCTTCTaGGCCCCAATAACTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GAQGYSQSWSCGHQARQCSYCGF*APITPA
Trigger: AGCTGGAGTTATTGGGGCCCAGAAGCCGCAATATGA...GCACTGTCTGGCCTGGTGGCCACACGACCAGGACTGAGAATAGCCTTGGGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAAGGCAGGATTTGGGGTTaGTGCGAGGGAGCCCCGGGT +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQGRIWG*CEGAPG
Trigger: ACCCGGGGCTCCCTCGCACCAACCCCAAATCCTGCC...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000418030.7
CDS-3UTR CCA 90 bp CAGCCTAGGGTAGCTGAAGGAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGGGCCTGAAGGGGCCATaGATCAGGGTGACCCCTTGC +
Preference number: 4 (lower is better)
Translates to: QPRVAEGGPVRVKSVFRKGLKGP*IRVTPC
Trigger: GCAAGGGGTCACCCTGATCCATGGCCCCTTCAGGCC...CTTCCTGAACACAGACTTGACACGAACTGGACCTCCTTCAGCTACCCTAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR CCA 90 bp GAAGATGAAGAAGGAGATAGCACCCATCAGTTTGGGCTCCTTCAGCACTCCGGGGGCCTGAAGGGGCCATaGATCAGGGTGACCCCTTGC +
Preference number: 4 (lower is better)
Translates to: EDEEGDSTHQFGLLQHSGGLKGP*IRVTPC
Trigger: GCAAGGGGTCACCCTGATCCATGGCCCCTTCAGGCC...CCCGGAGTGCTGAAGGAGCCCAAACTGATGGGTGCTATCTCCTTCTTCATCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR CCA 90 bp AGATTAAGGGCATGTGGGAACACTCACTGGGACACTGATGAGAGGCAGAGACCCCTGGTGGGGCTGAGCTaGGTGACTTACCTGGCGAGC +
Preference number: 4 (lower is better)
Translates to: RLRACGNTHWDTDERQRPLVGLS*VTYLAS
Trigger: GCTCGCCAGGTAAGTCACCCAGCTCAGCCCCACCAG...GGGTCTCTGCCTCTCATCAGTGTCCCAGTGAGTGTTCCCACATGCCCTTAATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR TCA 90 bp CAGACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAAGGGAGCCGGGGACCTaGTGGCGGAGTCACGCTCGC +
Preference number: 4 (lower is better)
Translates to: QTSMGSRHPRVSLLRFLEREPGT*WRSHAR
Trigger: GCGAGCGTGACTCCGCCATCAGGTCCCCGGCTCCCT...TTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp TCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTCACCACGCCCCCGGTaGACAGGAAGGCGTGGCCTA +
Preference number: 4 (lower is better)
Translates to: SMGSRHPRVSLLRFLEGESPRPR*TGRRGL
Trigger: TAGGCCACGCCTTCCTGTTCACCGGGGGCGTGGTGA...CTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATTCACCACGCCCCCGGTaGACAGGAAGGCGTGGCCTA +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNSPRPR*TGRRGL
Trigger: TAGGCCACGCCTTCCTGTTCACCGGGGGCGTGGTGA...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp ATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGACAGCAGTGCAGGCCGTaGGTCCGGCTGTGGCCCAAG +
Preference number: 4 (lower is better)
Translates to: INGLQTPQSLFIEVLRRRQQCRP*VRLWPK
Trigger: CTTGGGCCACAGCCGGACTCACGGCCTGCACTGCTG...TCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp TGGAGGACACATTGGGAGCTTGGAAAGGGCAGTCTGATGATGTTGGGAAGAAGAGTGAGTGCAGGGAGCTaGGTGCCTCCCGGAACGTGG +
Preference number: 4 (lower is better)
Translates to: WRTHWELGKGSLMMLGRRVSAGS*VPPGTW
Trigger: CCACGTTCCGGGAGGCACTCAGCTCCCTGCACTCAC...TCTTCTTCCCAACATCATCAGACTGCCCTTTCCAAGCTCCCAATGTGTCCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR TCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAAGGCATGGTCTGGCAGTaGGAGTGGCAGCCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQGMVWQ*EWQPRD
Trigger: GTCTCTGGGCTGCCACTCTCACTGCCAGACCATGCC...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000644961.1
CDS-3UTR TCA 90 bp ATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCGGCATGGTCTGGCAGTaGGAGTGGCAGCCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: MGSRHPRVSLLRFLEGECGMVWQ*EWQPRD
Trigger: GTCTCTGGGCTGCCACTCTCACTGCCAGACCATGCC...GCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310677.8
ENST00000644961.1
CDS-3UTR TCA 90 bp ATGAAGAAGGAGATAGCACCCATCAGTTTGGGCTCCTTCAGCACTCCGGGCCTGACTTCTGCAGCCCGATaGCTCCACACAGTACGCTGC +
Preference number: 4 (lower is better)
Translates to: MKKEIAPISLGSFSTPGLTSAAR*LHTVRC
Trigger: GCAGCGTACTGTGTGGAGTCATCGGGCTGCAGAAGT...CAGGCCCGGAGTGCTGAAGGAGCCCAAACTGATGGGTGCTATCTCCTTCTTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR TCA 90 bp GTCCAAGGGGCCCAGATAGAGGCGGACGATGAGGCATTCCGACAGCCAGGCATGCCTCATCAGGTCCTCTaGGAAGCAGACAAAAAGGAT +
Preference number: 4 (lower is better)
Translates to: VQGAQIEADDEAFRQPGMPHQVL*EADKKD
Trigger: ATCCTTTTTGTCTGCTTCTCAGAGGACCTGATGAGG...CATGCCTGGCTGTCGGAATGCCTCATCGTCCGCCTCTATCTGGGCCCCTTGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR TCA 90 bp AGCAGTGATGGACGCATCTTGAGGCCCTCAAGCGAGGACAGCAAGCCTCCTGCACTTGAAGTCTGGGACTaGGGCGAAGAGGACACAAAC +
Preference number: 4 (lower is better)
Translates to: SSDGRILRPSSEDSKPPALEVWD*GEEDTN
Trigger: GTTTGTGTCCTCTTCGCCTCAGTCCCAGACTTCAAG...TGCAGGAGGCTTGCTGTCCTCGCTTGAGGGCCTCAAGATGCGTCCATCACTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR TCA 90 bp AGCAGTGATGGACGCATCTTGAGGCCCTCAAGCGAGGACAGCAAGCCTCCTGCACAGAGTAGAACTCCTTaGAGTCTGGGACTGAGGCGA +
Preference number: 4 (lower is better)
Translates to: SSDGRILRPSSEDSKPPAQSRTP*SLGLRR
Trigger: TCGCCTCAGTCCCAGACTTCAAGGAGTTCTACTCTG...TGCAGGAGGCTTGCTGTCCTCGCTTGAGGGCCTCAAGATGCGTCCATCACTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR TCA 90 bp GTCCAAGGGGCCCAGATAGAGGCGGACGATGAGGCATTCCGACAGCCAGGCATGCACTCTAGGCCCTCATaGTTGATGTTGGATTCAGAG +
Preference number: 4 (lower is better)
Translates to: VQGAQIEADDEAFRQPGMHSRPS*LMLDSE
Trigger: CTCTGAATCCAACATCAATCATGAGGGCCTAGAGTG...CATGCCTGGCTGTCGGAATGCCTCATCGTCCGCCTCTATCTGGGCCCCTTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR TCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAAGCTCCCAGCTGGCGATaGGGGGATCCCTCAGTCCTT +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQAPSWR*GDPSVL
Trigger: AAGGACTGAGGGATCCCCTCATCGCCAGCTGGGAGC...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418030.7
CDS-3UTR TCA 90 bp ATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGACAGGAAGCTCGGGTCTaGGGTCAGCTCTGCCCGCGG +
Preference number: 4 (lower is better)
Translates to: INGLQTPQSLFIEVLRRRQEARV*GQLCPR
Trigger: CCGCGGGCAGAGCTGACCTCAGACCCGAGCTTCCTG...TCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR TCA 90 bp TGGAGGACACATTGGGAGCTTGGAAAGGGCAGTCTGATGATGTTGGGAAGAAGATCAGCACTCCGGGCCTaGAGGGGCCATGGATCAGGG +
Preference number: 4 (lower is better)
Translates to: WRTHWELGKGSLMMLGRRSALRA*RGHGSG
Trigger: CCCTGATCCATGGCCCCTTCAGGCCCGGAGTGCTGA...TCTTCTTCCCAACATCATCAGACTGCCCTTTCCAAGCTCCCAATGTGTCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR GCA 90 bp GACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCTGAGGTCAGCTCCCTaGCGCTGGCCCAGGCCACTG +
Preference number: 4 (lower is better)
Translates to: DINGLQTPQSLFIEVLRRLRSAP*RWPRPL
Trigger: CAGTGGCCTGGGCCAGCGGCAGGGAGCTGACCTCAG...CCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310677.8
ENST00000644961.1
CDS-3UTR GCA 90 bp ACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCCTGAGGTCAGCTCCCTaGCGCTGGCCCAGGCCACTG +
Preference number: 4 (lower is better)
Translates to: TSMGSRHPRVSLLRFLEGLRSAP*RWPRPL
Trigger: CAGTGGCCTGGGCCAGCGGCAGGGAGCTGACCTCAG...GCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310677.8
ENST00000644961.1
CDS-3UTR GCA 90 bp GACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGGGACGCGTCCAGCGCTaGAGTCGCTGCTCCCGGGAA +
Preference number: 4 (lower is better)
Translates to: DINGLQTPQSLFIEVLRRGRVQR*SRCSRE
Trigger: TTCCCGGGAGCAGCGACTGCAGCGCTGGACGCGTCC...CCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp GACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGGCGGCGTCCCGCATaGCCAAGGGCAGCATGGCAT +
Preference number: 4 (lower is better)
Translates to: DINGLQTPQSLFIEVLRRRRRPA*PRAAWH
Trigger: ATGCCATGCTGCCCTTGGGCATGCGGGACGCCGCCG...CCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAACCGAGGACCAGCAGATaGGAGAGTGAGGAGGCGAGG +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQPRTSR*ESEEAR
Trigger: CCTCGCCTCCTCACTCTCGCATCTGCTGGTCCTCGG...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAAGCGTTTGCTGCCAACTaGGGCAGCAGTGCAGGCCGT +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQAFAAN*GSSAGR
Trigger: ACGGCCTGCACTGCTGCCGCAGTTGGCAGCAAACGC...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp GAAGATGAAGAAGGAGATAGCACCCATCAGTTTGGGCTCCTTCAGCACTCCGGGCAGCACTGCGTTTGCTaGCAACTGCGGCAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: EDEEGDSTHQFGLLQHSGQHCVC*QLRQQC
Trigger: GCACTGCTGCCGCAGTTGGCAGCAAACGCAGTGCTG...CCCGGAGTGCTGAAGGAGCCCAAACTGATGGGTGCTATCTCCTTCTTCATCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp ACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGTGCAGGGAGCTGAGTaGCTCCCGGAACGTGGCCCG +
Preference number: 4 (lower is better)
Translates to: TSMGSRHPRVSLLRFLEGVQGAE*LPERGP
Trigger: CGGGCCACGTTCCGGGAGGCACTCAGCTCCCTGCAC...GCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp GACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGGTGCAGGGAGCTGAGTaGCTCCCGGAACGTGGCCCG +
Preference number: 4 (lower is better)
Translates to: DINGLQTPQSLFIEVLRRVQGAE*LPERGP
Trigger: CGGGCCACGTTCCGGGAGGCACTCAGCTCCCTGCAC...CCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp ACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCAGCCGCCGGCGTGAGTaGAGGGAGCTGAGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: TSMGSRHPRVSLLRFLEGSRRRE*RELSAS
Trigger: GGAGGCACTCAGCTCCCTGCACTCACGCCGGCGGCT...GCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp AAATCATGGAGGACACATTGGGAGCTTGGAAAGGGCAGTCTGATGATGTTGGGAAGCCGCCGGCGTGAGTaGAGGGAGCTGAGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: KSWRTHWELGKGSLMMLGSRRRE*RELSAS
Trigger: GGAGGCACTCAGCTCCCTGCACTCACGCCGGCGGCT...TCCCAACATCATCAGACTGCCCTTTCCAAGCTCCCAATGTGTCCTCCATGATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp ATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCGTCCACGCCAGTGGCTaGCCGCAGTTTCCTGATGGC +
Preference number: 4 (lower is better)
Translates to: MGSRHPRVSLLRFLEGECVHASG*PQFPDG
Trigger: GCCATCAGGAAACTGCGGGCAGCCACTGGCGTGGAC...GCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310677.8
ENST00000644961.1
CDS-3UTR GCA 90 bp AGATTAAGGGCATGTGGGAACACTCACTGGGACACTGATGAGAGGCAGAGACCCGGTCCCGATGCTCCATaGCTGCGTCCTCCACAGCAT +
Preference number: 4 (lower is better)
Translates to: RLRACGNTHWDTDERQRPGPDAP*LRPPQH
Trigger: ATGCTGTGGAGGACGCAGGCATGGAGCATCGGGACC...GGGTCTCTGCCTCTCATCAGTGTCCCAGTGAGTGTTCCCACATGCCCTTAATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR GCA 90 bp GGTGCCCAAGGCTATTCTCAGTCCTGGTCGTGTGGCCACCAGGCCAGACAGTGCTTTGAAGGCGGGGATTaGAGAGAGTCGGTACTCTTT +
Preference number: 4 (lower is better)
Translates to: GAQGYSQSWSCGHQARQCFEGGD*RESVLF
Trigger: AAAGAGTACCGACTCTCTGCAATCCCCGCCTTCAAA...GCACTGTCTGGCCTGGTGGCCACACGACCAGGACTGAGAATAGCCTTGGGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp CAAGGCTATTCTCAGTCCTGGTCGTGTGGCCACCAGGCCAGACAGTGCAGGCAGGTGTGTATGTGGGTGTaGAGAGGAACCTTGGCAATC +
Preference number: 4 (lower is better)
Translates to: QGYSQSWSCGHQARQCRQVCMWV*RGTLAI
Trigger: GATTGCCAAGGTTCCTCTGCACACCCACATACACAC...CTGCCTGCACTGTCTGGCCTGGTGGCCACACGACCAGGACTGAGAATAGCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
CDS-3UTR CCA 90 bp CAGACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGCTGGCGCAGCGGAGTaGGCTAGGTCCGGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: QTSMGSRHPRVSLLRFLEAGAAE*ARSGEG
Trigger: TCCCTCCCCGGACCTAGCCCACTCCGCTGCGCCAGC...TTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp ACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCTCAGCTCCCTGCCGCTaGCCCAGGCCACTGCGAGCA +
Preference number: 4 (lower is better)
Translates to: TSMGSRHPRVSLLRFLEGSAPCR*PRPLRA
Trigger: TGCTCGCAGTGGCCTGGGCCAGCGGCAGGGAGCTGA...GCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310677.8
ENST00000644961.1
CDS-3UTR CCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAAGCGCGCACAGCACAGTaGTCAGGAAGCTCGGGTCTG +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQARTAQ*SGSSGL
Trigger: CAGACCCGAGCTTCCTGACCACTGTGCTGTGCGCGC...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp AGTGGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCGAGTTGAGCTGCTCAGCGCGCACAGCACAGTaGTCAGGAAGCTCGGGTCTG +
Preference number: 4 (lower is better)
Translates to: SGLKSFDCFHCFCELSCSARTAQ*SGSSGL
Trigger: CAGACCCGAGCTTCCTGACCACTGTGCTGTGCGCGC...TGAGCAGCTCAACTCGCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAAGTGAACAGGAAGGCGTaGCCTAGCGCTAGCAGCGCG +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQVNRKA*PSASSA
Trigger: CGCGCTGCTAGCGCTAGGCCACGCCTTCCTGTTCAC...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp CCCAGGGCCACGGCAAATTCCACCATAGTGCCAAGGTGGCTGCAGCTCCGTTCAAAGAGAAGGTGTTCCTaGTGCTTCTTCTCGGTGTCC +
Preference number: 4 (lower is better)
Translates to: PRATANSTIVPRWLQLRSKRRCS*CFFSVS
Trigger: GGACACCGAGAAGAAGCACCAGGAACACCTTCTCTT...TGAACGGAGCTGCAGCCACCTTGGCACTATGGTGGAATTTGCCGTGGCCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAAGGAGAGGGGTGGAGGTaGACACAGGGCTGTCTCCGT +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQGEGWR*TQGCLR
Trigger: ACGGAGACAGCCCTGTGTCCACCTCCACCCCTCTCC...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp TGTCTCCTCAGTCACTTGGATTTTGCCAAGGACTCCTGTACTCTCCATGCGGCTGGAGAGGGGTGGAGGTaGACACAGGGCTGTCTCCGT +
Preference number: 4 (lower is better)
Translates to: CLLSHLDFAKDSCTLHAAGEGWR*TQGCLR
Trigger: ACGGAGACAGCCCTGTGTCCACCTCCACCCCTCTCC...AGCCGCATGGAGAGTACAGGAGTCCTTGGCAAAATCCAAGTGACTGAGGAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp AGTGGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCGAGTTGAGCTGCTCAGGAGAGGGGTGGAGGTaGACACAGGGCTGTCTCCGT +
Preference number: 4 (lower is better)
Translates to: SGLKSFDCFHCFCELSCSGEGWR*TQGCLR
Trigger: ACGGAGACAGCCCTGTGTCCACCTCCACCCCTCTCC...TGAGCAGCTCAACTCGCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp GTCCAAGGGGCCCAGATAGAGGCGGACGATGAGGCATTCCGACAGCCAGGCATGGAAGTACAGTGTCAGTaGGTTGAAGTCCTTCGACTG +
Preference number: 4 (lower is better)
Translates to: VQGAQIEADDEAFRQPGMEVQCQ*VEVLRL
Trigger: CAGTCGAAGGACTTCAACCCACTGACACTGTACTTC...CATGCCTGGCTGTCGGAATGCCTCATCGTCCGCCTCTATCTGGGCCCCTTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp TCTTCTTCCACAGGAAGTCCAGGCGGCAGTAGTACTCATTCTGGCGAGCCAGGAGCCAGTGCAGCATCTTaGGGCCTTTCAGGACACACC +
Preference number: 4 (lower is better)
Translates to: SSSTGSPGGSSTHSGEPGASAAS*GLSGHT
Trigger: GGTGTGTCCTGAAAGGCCCCAAGATGCTGCACTGGC...TCCTGGCTCGCCAGAATGAGTACTACTGCCGCCTGGACTTCCTGTGGAAGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
CDS-3UTR CCA 90 bp CAGCCTAGGGTAGCTGAAGGAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGTCAGTCCTGGTCGTGTaGCCACCAGGCCAGACAGTG +
Preference number: 4 (lower is better)
Translates to: QPRVAEGGPVRVKSVFRKSVLVV*PPGQTV
Trigger: CACTGTCTGGCCTGGTGGCCACACGACCAGGACTGA...CTTCCTGAACACAGACTTGACACGAACTGGACCTCCTTCAGCTACCCTAGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp AAGGAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGTAGGTGCAGAGCTGCCTCAGTCCTGGTCGTGTaGCCACCAGGCCAGACAGTG +
Preference number: 4 (lower is better)
Translates to: KEVQFVSSLCSGSRCRAASVLVV*PPGQTV
Trigger: CACTGTCTGGCCTGGTGGCCACACGACCAGGACTGA...GGCAGCTCTGCACCTACTTCCTGAACACAGACTTGACACGAACTGGACCTCCTT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp GAGCAGCAGCAGCTTCAGCTCGAAGCTCATGTGCAGAAAGAGGGAGCAGGAGAGAGACAAGGAGGATGGTaGCGGTGCCCAAGGCTATTC +
Preference number: 4 (lower is better)
Translates to: EQQQLQLEAHVQKEGAGERQGGW*RCPRLF
Trigger: GAATAGCCTTGGGCACCGCCACCATCCTCCTTGTCT...CTCTCCTGCTCCCTCTTTCTGCACATGAGCTTCGAGCTGAAGCTGCTGCTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATCAGCACTCCGGGCCTaGAGTCCAAGGGGCCCAGAT +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQSALRA*SPRGPD
Trigger: ATCTGGGCCCCTTGGACTCCAGGCCCGGAGTGCTGA...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000644961.1
CDS-3UTR CCA 90 bp CAGTGTCAGTGGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCGAGTTGAGTCAGCACTCCGGGCCTaGAGTCCAAGGGGCCCAGAT +
Preference number: 4 (lower is better)
Translates to: QCQWVEVLRLLPLFLRVESALRA*SPRGPD
Trigger: ATCTGGGCCCCTTGGACTCCAGGCCCGGAGTGCTGA...CTCAACTCGCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACTGACACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
CDS-3UTR CCA 90 bp GAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGTAGGTGCAGAGCTGCCCTTTTCTGGCCAATGAACTaGGGGGCCACGTGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: EVQFVSSLCSGSRCRAALFWPMN*GATCAG
Trigger: CCCTGCACACGTGGCCCCCCAGTTCATTGGCCAGAA...AAGGGCAGCTCTGCACCTACTTCCTGAACACAGACTTGACACGAACTGGACCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp GAAGTCCAGGCGGCAGTAGTACTCATTCTGGCGAGCCAGGACAAGGAGGGTGAAACCATAGTGCCAAGGTaGCTGCAGCTCCGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: EVQAAVVLILASQDKEGETIVPR*LQLRSA
Trigger: TGCTGAACGGAGCTGCAGCCACCTTGGCACTATGGT...TTCACCCTCCTTGTCCTGGCTCGCCAGAATGAGTACTACTGCCGCCTGGACTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
CDS-3UTR CCA 90 bp CAGTGTCAGTGGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCGAGTTGAGGTGCATGGAGTACTGTaGGGCCAGGCAGGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: QCQWVEVLRLLPLFLRVEVHGVL*GQAGVR
Trigger: CCTGACCCCTGCCTGGCCCCACAGTACTCCATGCAC...CTCAACTCGCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACTGACACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR CCA 90 bp TGTCTCCTCAGTCACTTGGATTTTGCCAAGGACTCCTGTACTCTCCATGCGGCTGCGTGCAGCAGTGCATaGAGTACTGTGGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: CLLSHLDFAKDSCTLHAAACSSA*STVGPG
Trigger: GCCTGGCCCCACAGTACTCCATGCACTGCTGCACGC...AGCCGCATGGAGAGTACAGGAGTCCTTGGCAAAATCCAAGTGACTGAGGAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR CCA 90 bp ATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCCTGGTGGGGCTGAGCTaGGTGACTTACCTGGCGAGC +
Preference number: 4 (lower is better)
Translates to: MGSRHPRVSLLRFLEGECLVGLS*VTYLAS
Trigger: GCTCGCCAGGTAAGTCACCCAGCTCAGCCCCACCAG...GCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR CCA 90 bp GTGCAGCAGTGCATGGAGTATGGGACACTGATGAGAGGCAGAGACCCAGGGAGCCTGGGAGTGTGTATGTaGGTGTGCAGAGGAACCTTG +
Preference number: 4 (lower is better)
Translates to: VQQCMEYGTLMRGRDPGSLGVCM*VCRGTL
Trigger: CAAGGTTCCTCTGCACACCCACATACACACTCCCAG...GCTCCCTGGGTCTCTGCCTCTCATCAGTGTCCCATACTCCATGCACTGCTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
CDS-3UTR TCA 90 bp ACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCTCACCACGCCCCCGGTaGACAGGAAGGCGTGGCCTA +
Preference number: 4 (lower is better)
Translates to: TSMGSRHPRVSLLRFLEGSPRPR*TGRRGL
Trigger: TAGGCCACGCCTTCCTGTTCACCGGGGGCGTGGTGA...GCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp CAGACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAACAGCAGATGCGAGAGTaGGGAGGCGAGGCCCGCGAC +
Preference number: 4 (lower is better)
Translates to: QTSMGSRHPRVSLLRFLEQQMRE*GGEARD
Trigger: GTCGCGGGCCTCGCCTCCTCACTCTCGCATCTGCTG...TTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp GACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGGTGAGTGCAGGGAGCTaGGTGCCTCCCGGAACGTGG +
Preference number: 4 (lower is better)
Translates to: DINGLQTPQSLFIEVLRRVSAGS*VPPGTW
Trigger: CCACGTTCCGGGAGGCACTCAGCTCCCTGCACTCAC...CCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp ATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGAGTGCAGGGAGCTaGGTGCCTCCCGGAACGTGG +
Preference number: 4 (lower is better)
Translates to: INGLQTPQSLFIEVLRRRVSAGS*VPPGTW
Trigger: CCACGTTCCGGGAGGCACTCAGCTCCCTGCACTCAC...TCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp TCCGTTCAGCATCCTGTTGTGCATCCTGTCCAGAGGTGGCATTTAAGCCTGTGGCCTGCAGCCGTGCCATaGTCTCTGCCTTCATCTCTC +
Preference number: 4 (lower is better)
Translates to: SVQHPVVHPVQRWHLSLWPAAVP*SLPSSL
Trigger: GAGAGATGAAGGCAGAGATCATGGCACGGCTGCAGG...CCACAGGCTTAAATGCCACCTCTGGACAGGATGCACAACAGGATGCTGAACGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR TCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAACCATGCGCACGCAGTTaGTGGCATGGTCTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQPCARS*WHGLAV
Trigger: CACTGCCAGACCATGCCATCAACTGCGTGCGCATGG...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000644961.1
CDS-3UTR TCA 90 bp GTGCAGCAGTGCATGGAGTATGGGACACTGATGAGAGGCAGAGACCCAGGGAGCCCATCTCCTTCTCTCTaGAGTACAGTGTCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: VQQCMEYGTLMRGRDPGSPSPSL*STVSVG
Trigger: ACCCACTGACACTGTACTTCAGAGAGAAGGAGATGG...GCTCCCTGGGTCTCTGCCTCTCATCAGTGTCCCATACTCCATGCACTGCTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
CDS-3UTR TCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAAGATAGAGGCGGACGATaGGGCATTCCGACAGCCAGG +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQDRGGR*GIPTAR
Trigger: CCTGGCTGTCGGAATGCCTCATCGTCCGCCTCTATC...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp GTCCAAGGGGCCCAGATAGAGGCGGACGATGAGGCATTCCGACAGCCAGGCATGGCGGAAGTTGTTGAATaGATGCTTGTTGATGACGTC +
Preference number: 4 (lower is better)
Translates to: VQGAQIEADDEAFRQPGMAEVVE*MLVDDV
Trigger: GACGTCATCAACAAGCATTCATTCAACAACTTCCGC...CATGCCTGGCTGTCGGAATGCCTCATCGTCCGCCTCTATCTGGGCCCCTTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR TCA 90 bp TGGGAAGAAGAACAGGCTGGTAATGGCCATGGCAAAGACAAGGAGGATGGTGGCTCAGCCCCAACTCCATaGTGCCTGAAACCACCCCCA +
Preference number: 4 (lower is better)
Translates to: WEEEQAGNGHGKDKEDGGSAPTP*CLKPPP
Trigger: TGGGGGTGGTTTCAGGCATCATGGAGTTGGGGCTGA...GCCACCATCCTCCTTGTCTTTGCCATGGCCATTACCAGCCTGTTCTTCTTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR GCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATCCGAGGACCAGCAGATaGGAGAGTGAGGAGGCGAGG +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNPRTSR*ESEEAR
Trigger: CCTCGCCTCCTCACTCTCGCATCTGCTGGTCCTCGG...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp CTGAAGTACAGTGTCAGTGGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCCCGAGGACCAGCAGATaGGAGAGTGAGGAGGCGAGG +
Preference number: 4 (lower is better)
Translates to: LKYSVSGLKSFDCFHCFCPRTSR*ESEEAR
Trigger: CCTCGCCTCCTCACTCTCGCATCTGCTGGTCCTCGG...GCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACTGACACTGTACTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATGCGTTTGCTGCCAACTaGGGCAGCAGTGCAGGCCGT +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNAFAAN*GSSAGR
Trigger: ACGGCCTGCACTGCTGCCGCAGTTGGCAGCAAACGC...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAACAGCACTGCGTTTGCTaGCAACTGCGGCAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQQHCVC*QLRQQC
Trigger: GCACTGCTGCCGCAGTTGGCAGCAAACGCAGTGCTG...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp ATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCCAGCACTGCGTTTGCTaGCAACTGCGGCAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: MGSRHPRVSLLRFLEGECQHCVC*QLRQQC
Trigger: GCACTGCTGCCGCAGTTGGCAGCAAACGCAGTGCTG...GCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp GAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGTAGGTGCAGAGCTGCCCTTGAACAGCACTGCGTTTaGTGCCAACTGCGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: EVQFVSSLCSGSRCRAALEQHCV*CQLRQQ
Trigger: CTGCTGCCGCAGTTGGCAGCAAACGCAGTGCTGTTC...AAGGGCAGCTCTGCACCTACTTCCTGAACACAGACTTGACACGAACTGGACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp GAGCAGCAGCAGCTTCAGCTCGAAGCTCATGTGCAGAAAGAGGGAGCAGGAGAGAGAAGGTGTTCCTGGTaGTTCTTCTCGGTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: EQQQLQLEAHVQKEGAGERRCSW*FFSVSS
Trigger: GCTGGACACCGAGAAGAAGCACCAGGAACACCTTCT...CTCTCCTGCTCCCTCTTTCTGCACATGAGCTTCGAGCTGAAGCTGCTGCTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp GAAGATGAAGAAGGAGATAGCACCCATCAGTTTGGGCTCCTTCAGCACTCCGGGCCGTGCCATGATCTCTaGCTTCATCTCTCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: EDEEGDSTHQFGLLQHSGPCHDL*LHLSGQ
Trigger: CTGGCCCGAGAGATGAAGGCAGAGATCATGGCACGG...CCCGGAGTGCTGAAGGAGCCCAAACTGATGGGTGCTATCTCCTTCTTCATCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATGTCCACGCCAGTGGCTaGCCGCAGTTTCCTGATGGC +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNVHASG*PQFPDG
Trigger: GCCATCAGGAAACTGCGGGCAGCCACTGGCGTGGAC...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000644961.1
CDS-3UTR GCA 90 bp GGTGCAGGCTTCATAGTATTTGAAGGCGGGGATTGCAGAGAGTCGGTACTCTTTGTCCACGCCAGTGGCTaGCCGCAGTTTCCTGATGGC +
Preference number: 4 (lower is better)
Translates to: GAGFIVFEGGDCRESVLFVHASG*PQFPDG
Trigger: GCCATCAGGAAACTGCGGGCAGCCACTGGCGTGGAC...AAAGAGTACCGACTCTCTGCAATCCCCGCCTTCAAATACTATGAAGCCTGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
CDS-3UTR GCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAACCCTGGTACACCGCCTaGCTCCATGTGGTTAGCCAG +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQPWYTA*LHVVSQ
Trigger: CTGGCTAACCACATGGAGGCAGGCGGTGTACCAGGG...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp ATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCGTAGCCCCTGTGATGTaGACTCGCCCTGGTACACCG +
Preference number: 4 (lower is better)
Translates to: MGSRHPRVSLLRFLEGECVAPVM*TRPGTP
Trigger: CGGTGTACCAGGGCGAGTGCACATCACAGGGGCTAC...GCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAAGGTCCCGATGCTCCATaGCTGCGTCCTCCACAGCAT +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQGPDAP*LRPPQH
Trigger: ATGCTGTGGAGGACGCAGGCATGGAGCATCGGGACC...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp AAGGAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGTAGGTGCAGAGCTGCCGGACAGCAAGCCTCCTaGAGTGCCCTTCTCATCCTC +
Preference number: 4 (lower is better)
Translates to: KEVQFVSSLCSGSRCRAAGQQAS*SALLIL
Trigger: GAGGATGAGAAGGGCACTGCAGGAGGCTTGCTGTCC...GGCAGCTCTGCACCTACTTCCTGAACACAGACTTGACACGAACTGGACCTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp CCCAGGGCCACGGCAAATTCCACCATAGTGCCAAGGTGGCTGCAGCTCCGTTCATTCTGCGAGTTGAGCTaGTCAATGACCTGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: PRATANSTIVPRWLQLRSFCELS*SMTWKN
Trigger: GTTCTTCCAGGTCATTGAGCAGCTCAACTCGCAGAA...TGAACGGAGCTGCAGCCACCTTGGCACTATGGTGGAATTTGCCGTGGCCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp CGCATCTTGAGGCCCTCAAGCGAGGACAGCAAGCCTCCTGCAGTGCCCTTCTCATTCTGCGAGTTGAGCTaGTCAATGACCTGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: RILRPSSEDSKPPAVPFSFCELS*SMTWKN
Trigger: GTTCTTCCAGGTCATTGAGCAGCTCAACTCGCAGAA...TGAGAAGGGCACTGCAGGAGGCTTGCTGTCCTCGCTTGAGGGCCTCAAGATGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp AGGAGCAGCAGCAGCTTCAGCTCGAAGCTCATGTGCAGAAAGAGGGAGCAGGAGTTCAGCATCCTGTTGTaGATCCTGTCCAGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: RSSSSFSSKLMCRKREQEFSILL*ILSRGG
Trigger: GCCACCTCTGGACAGGATGCACAACAGGATGCTGAA...CTCCTGCTCCCTCTTTCTGCACATGAGCTTCGAGCTGAAGCTGCTGCTGCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp AATGGAGCGTTCCTCCACTCAGGGGGCTGTGGGCTTGGGCTGAGGAAGGGTGTGCAGTCACTTGGATTTTaGCAAGGACTCCTGTACTCT +
Preference number: 4 (lower is better)
Translates to: NGAFLHSGGCGLGLRKGVQSLGF*QGLLYS
Trigger: AGAGTACAGGAGTCCTTGGCAAAATCCAAGTGACTG...CACACCCTTCCTCAGCCCAAGCCCACAGCCCCCTGAGTGGAGGAACGCTCCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR GCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATAGGATTTGGGGTTGGTaGGAGGGAGCCCCGGGTTCC +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNRIWGW*EGAPGS
Trigger: GGAACCCGGGGCTCCCTCGCACCAACCCCAAATCCT...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000418030.7
CDS-3UTR GCA 90 bp GAAGATGAAGAAGGAGATAGCACCCATCAGTTTGGGCTCCTTCAGCACTCCGGGTCTGTCCAGCAGCTGTaGACACCTGGAGTCCAAGGG +
Preference number: 4 (lower is better)
Translates to: EDEEGDSTHQFGLLQHSGSVQQL*TPGVQG
Trigger: CCCTTGGACTCCAGGTGTGCACAGCTGCTGGACAGA...CCCGGAGTGCTGAAGGAGCCCAAACTGATGGGTGCTATCTCCTTCTTCATCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR CCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATGTGAACAGGAAGGCGTaGCCTAGCGCTAGCAGCGCG +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNVNRKA*PSASSA
Trigger: CGCGCTGCTAGCGCTAGGCCACGCCTTCCTGTTCAC...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp AATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGGTGAACAGGAAGGCGTaGCCTAGCGCTAGCAGCGCG +
Preference number: 4 (lower is better)
Translates to: NGLQTPQSLFIEVLRRRVVNRKA*PSASSA
Trigger: CGCGCTGCTAGCGCTAGGCCACGCCTTCCTGTTCAC...CACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp TCTTCTTCCACAGGAAGTCCAGGCGGCAGTAGTACTCATTCTGGCGAGCCAGGATCCATCAGCGCCTTGTaGTACACTCCTGCCACGTTC +
Preference number: 4 (lower is better)
Translates to: SSSTGSPGGSSTHSGEPGSISAL*YTPATF
Trigger: GAACGTGGCAGGAGTGTACCACAAGGCGCTGATGGA...TCCTGGCTCGCCAGAATGAGTACTACTGCCGCCTGGACTTCCTGTGGAAGAAGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
CDS-3UTR CCA 90 bp ATGAAGAAGGAGATAGCACCCATCAGTTTGGGCTCCTTCAGCACTCCGGGCCTGTCCATCAGCGCCTTGTaGTACACTCCTGCCACGTTC +
Preference number: 4 (lower is better)
Translates to: MKKEIAPISLGSFSTPGLSISAL*YTPATF
Trigger: GAACGTGGCAGGAGTGTACCACAAGGCGCTGATGGA...CAGGCCCGGAGTGCTGAAGGAGCCCAAACTGATGGGTGCTATCTCCTTCTTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp AGTGGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCGAGTTGAGCTGCTCAGATGTGCACTCGCCCTaGTACACCGCCTGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: SGLKSFDCFHCFCELSCSDVHSP*YTACLH
Trigger: ATGGAGGCAGGCGGTGTACCAGGGCGAGTGCACATC...TGAGCAGCTCAACTCGCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATCTCCGTGGCTCAGGTaGGCAAAAGGCTTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQSPWLR*AKGLAA
Trigger: CGCAGCCAAGCCTTTTGCCCACCTGAGCCACGGAGA...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAAACAGGGCTGTCTCCGTaGCTCAGGTGGGCAAAAGGC +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQTGLSP*LRWAKG
Trigger: GCCTTTTGCCCACCTGAGCCACGGAGACAGCCCTGT...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp AATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGGGAGAGGGGTGGAGGTaGACACAGGGCTGTCTCCGT +
Preference number: 4 (lower is better)
Translates to: NGLQTPQSLFIEVLRRRVGEGWR*TQGCLR
Trigger: ACGGAGACAGCCCTGTGTCCACCTCCACCCCTCTCC...CACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAACGATCCAGGCTCCACTaGGTGCTGAAGGAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQRSRLH*VLKEAR
Trigger: CCTGGCTTCCTTCAGCACCCAGTGGAGCCTGGATCG...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp TGTCTCCTCAGTCACTTGGATTTTGCCAAGGACTCCTGTACTCTCCATGCGGCTCGATCCAGGCTCCACTaGGTGCTGAAGGAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: CLLSHLDFAKDSCTLHAARSRLH*VLKEAR
Trigger: CCTGGCTTCCTTCAGCACCCAGTGGAGCCTGGATCG...AGCCGCATGGAGAGTACAGGAGTCCTTGGCAAAATCCAAGTGACTGAGGAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp GAGCAGCAGCAGCTTCAGCTCGAAGCTCATGTGCAGAAAGAGGGAGCAGGAGAGAGCTGCTCAATGACCTaGAAGAACTTGGCATCCCCG +
Preference number: 4 (lower is better)
Translates to: EQQQLQLEAHVQKEGAGESCSMT*KNLASP
Trigger: CGGGGATGCCAAGTTCTTCCAGGTCATTGAGCAGCT...CTCTCCTGCTCCCTCTTTCTGCACATGAGCTTCGAGCTGAAGCTGCTGCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATCAGTCCTGGTCGTGTaGCCACCAGGCCAGACAGTG +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQSVLVV*PPGQTV
Trigger: CACTGTCTGGCCTGGTGGCCACACGACCAGGACTGA...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAAGGCTATTCTCAGTCCTaGTCGTGTGGCCACCAGGCC +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQGYSQS*SCGHQA
Trigger: GGCCTGGTGGCCACACGACCAGGACTGAGAATAGCC...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp CAGTGTCAGTGGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCGAGTTGAGGGCTATTCTCAGTCCTaGTCGTGTGGCCACCAGGCC +
Preference number: 4 (lower is better)
Translates to: QCQWVEVLRLLPLFLRVEGYSQS*SCGHQA
Trigger: GGCCTGGTGGCCACACGACCAGGACTGAGAATAGCC...CTCAACTCGCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACTGACACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp ATGAAGAAGGAGATAGCACCCATCAGTTTGGGCTCCTTCAGCACTCCGGGCCTGCAAAGACAAGGAGGATaGTGGCGGTGCCCAAGGCTA +
Preference number: 4 (lower is better)
Translates to: MKKEIAPISLGSFSTPGLQRQGG*WRCPRL
Trigger: TAGCCTTGGGCACCGCCACCATCCTCCTTGTCTTTG...CAGGCCCGGAGTGCTGAAGGAGCCCAAACTGATGGGTGCTATCTCCTTCTTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp ATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCTCCGACAGCCAGGCATaGGAGTGCAGGAAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: MGSRHPRVSLLRFLEGECSDSQA*ECRKRE
Trigger: CTCCCTCTTCCTGCACTCCCATGCCTGGCTGTCGGA...GCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATCCGACAGCCAGGCATaGGAGTGCAGGAAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQSDSQA*ECRKRE
Trigger: CTCCCTCTTCCTGCACTCCCATGCCTGGCTGTCGGA...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp TCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTCAGCACTCCGGGCCTaGAGTCCAAGGGGCCCAGAT +
Preference number: 4 (lower is better)
Translates to: SMGSRHPRVSLLRFLEGESALRA*SPRGPD
Trigger: ATCTGGGCCCCTTGGACTCCAGGCCCGGAGTGCTGA...CTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310677.8
ENST00000644961.1
CDS-3UTR CCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATTCTGGCCAATGAACTaGGGGGCCACGTGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQFWPMN*GATCAG
Trigger: CCCTGCACACGTGGCCCCCCAGTTCATTGGCCAGAA...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp AGTGGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCGAGTTGAGCTGCTCATTCTGGCCAATGAACTaGGGGGCCACGTGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SGLKSFDCFHCFCELSCSFWPMN*GATCAG
Trigger: CCCTGCACACGTGGCCCCCCAGTTCATTGGCCAGAA...TGAGCAGCTCAACTCGCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp TGGGAAGAAGAACAGGCTGGTAATGGCCATGGCAAAGACAAGGAGGATGGTGGCGCTACTACGGGTCCATaGTTCAACCCCACTCGCAGG +
Preference number: 4 (lower is better)
Translates to: WEEEQAGNGHGKDKEDGGATTGP*FNPTRR
Trigger: CCTGCGAGTGGGGTTGAACCATGGACCCGTAGTAGC...GCCACCATCCTCCTTGTCTTTGCCATGGCCATTACCAGCCTGTTCTTCTTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp CAGACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAAGGCCCAAGTGGGGCTaGTCCCAGGCGCTCACCACG +
Preference number: 4 (lower is better)
Translates to: QTSMGSRHPRVSLLRFLERPKWG*SQALTT
Trigger: CGTGGTGAGCGCCTGGGACCAGCCCCACTTGGGCCT...TTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR CCA 90 bp AAATCATGGAGGACACATTGGGAGCTTGGAAAGGGCAGTCTGATGATGTTGGGACCACTCAGGGGGCTGTaGGCTTGGGCTGAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: KSWRTHWELGKGSLMMLGPLRGL*AWAEEG
Trigger: CCCTTCCTCAGCCCAAGCCCACAGCCCCCTGAGTGG...TCCCAACATCATCAGACTGCCCTTTCCAAGCTCCCAATGTGTCCTCCATGATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR CCA 90 bp AGTGGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCGAGTTGAGCTGCTCAGGCAGGGGTCAGGAGTaGGCATGTCCCATAGGCAGA +
Preference number: 4 (lower is better)
Translates to: SGLKSFDCFHCFCELSCSGRGQE*ACPIGR
Trigger: TCTGCCTATGGGACATGCCCACTCCTGACCCCTGCC...TGAGCAGCTCAACTCGCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR TCA 90 bp ATGAAGAAGGAGATAGCACCCATCAGTTTGGGCTCCTTCAGCACTCCGGGCCTGAGTCCCCCAGGATCTTaGTCCGCATGCATTCATGCT +
Preference number: 4 (lower is better)
Translates to: MKKEIAPISLGSFSTPGLSPPGS*SACIHA
Trigger: AGCATGAATGCATGCGGATCAAGATCCTGGGGGACT...CAGGCCCGGAGTGCTGAAGGAGCCCAAACTGATGGGTGCTATCTCCTTCTTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
CDS-3UTR TCA 90 bp GACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGGGCATGGTCTGGCAGTaGGAGTGGCAGCCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: DINGLQTPQSLFIEVLRRGMVWQ*EWQPRD
Trigger: GTCTCTGGGCTGCCACTCTCACTGCCAGACCATGCC...CCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310677.8
ENST00000644961.1
CDS-3UTR TCA 90 bp AAATCATGGAGGACACATTGGGAGCTTGGAAAGGGCAGTCTGATGATGTTGGGAGGCATGGTCTGGCAGTaGGAGTGGCAGCCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: KSWRTHWELGKGSLMMLGGMVWQ*EWQPRD
Trigger: GTCTCTGGGCTGCCACTCTCACTGCCAGACCATGCC...TCCCAACATCATCAGACTGCCCTTTCCAAGCTCCCAATGTGTCCTCCATGATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
CDS-3UTR TCA 90 bp AATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCCATGCGCACGCAGTTaGTGGCATGGTCTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: NGLQTPQSLFIEVLRRRVPCARS*WHGLAV
Trigger: CACTGCCAGACCATGCCATCAACTGCGTGCGCATGG...CACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310677.8
ENST00000644961.1
CDS-3UTR TCA 90 bp CTGAAGTACAGTGTCAGTGGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCCCATGCGCACGCAGTTaGTGGCATGGTCTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: LKYSVSGLKSFDCFHCFCPCARS*WHGLAV
Trigger: CACTGCCAGACCATGCCATCAACTGCGTGCGCATGG...GCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACTGACACTGTACTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
CDS-3UTR TCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATCCATGCGCACGCAGTTaGTGGCATGGTCTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNPCARS*WHGLAV
Trigger: CACTGCCAGACCATGCCATCAACTGCGTGCGCATGG...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000644961.1
CDS-3UTR TCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATACACAGTACGCTGCCTaGGTGCACGCCCACACGCAT +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNTQYAA*VHAHTH
Trigger: ATGCGTGTGGGCGTGCACTCAGGCAGCGTACTGTGT...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp GGTGCAGGCTTCATAGTATTTGAAGGCGGGGATTGCAGAGAGTCGGTACTCTTTACACAGTACGCTGCCTaGGTGCACGCCCACACGCAT +
Preference number: 4 (lower is better)
Translates to: GAGFIVFEGGDCRESVLFTQYAA*VHAHTH
Trigger: ATGCGTGTGGGCGTGCACTCAGGCAGCGTACTGTGT...AAAGAGTACCGACTCTCTGCAATCCCCGCCTTCAAATACTATGAAGCCTGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR TCA 90 bp TCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGACACAGTACGCTGCCTaGGTGCACGCCCACACGCAT +
Preference number: 4 (lower is better)
Translates to: SMGSRHPRVSLLRFLEGETQYAA*VHAHTH
Trigger: ATGCGTGTGGGCGTGCACTCAGGCAGCGTACTGTGT...CTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAAACTTCTGCAGCCCGATaGCTCCACACAGTACGCTGC +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQTSAAR*LHTVRC
Trigger: GCAGCGTACTGTGTGGAGTCATCGGGCTGCAGAAGT...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAAGTGATGGACGCATCTTaGGGCCCTCAAGCGAGGACA +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQVMDAS*GPQART
Trigger: TGTCCTCGCTTGAGGGCCTCAAGATGCGTCCATCAC...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp ATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCACGGGTCATCAGCAGTaGTGGACGCATCTTGAGGCC +
Preference number: 4 (lower is better)
Translates to: MGSRHPRVSLLRFLEGECTGHQQ*WTHLEA
Trigger: GGCCTCAAGATGCGTCCATCACTGCTGATGACCCGT...GCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAAACGGGTCATCAGCAGTaGTGGACGCATCTTGAGGCC +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQTGHQQ*WTHLEA
Trigger: GGCCTCAAGATGCGTCCATCACTGCTGATGACCCGT...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATGATAGAGGCGGACGATaGGGCATTCCGACAGCCAGG +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNDRGGR*GIPTAR
Trigger: CCTGGCTGTCGGAATGCCTCATCGTCCGCCTCTATC...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp GGTGCAGGCTTCATAGTATTTGAAGGCGGGGATTGCAGAGAGTCGGTACTCTTTGATAGAGGCGGACGATaGGGCATTCCGACAGCCAGG +
Preference number: 4 (lower is better)
Translates to: GAGFIVFEGGDCRESVLFDRGGR*GIPTAR
Trigger: CCTGGCTGTCGGAATGCCTCATCGTCCGCCTCTATC...AAAGAGTACCGACTCTCTGCAATCCCCGCCTTCAAATACTATGAAGCCTGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR TCA 90 bp CAAGGCTATTCTCAGTCCTGGTCGTGTGGCCACCAGGCCAGACAGTGCAGGCAGCAGCAATTATCTCATTaGGCAGCCTCAGACACTCTA +
Preference number: 4 (lower is better)
Translates to: QGYSQSWSCGHQARQCRQQQLSH*AASDTL
Trigger: TAGAGTGTCTGAGGCTGCTCAATGAGATAATTGCTG...CTGCCTGCACTGTCTGGCCTGGTGGCCACACGACCAGGACTGAGAATAGCCTTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR TCA 90 bp CAAGGCTATTCTCAGTCCTGGTCGTGTGGCCACCAGGCCAGACAGTGCAGGCAGGCGGAAGTTGTTGAATaGATGCTTGTTGATGACGTC +
Preference number: 4 (lower is better)
Translates to: QGYSQSWSCGHQARQCRQAEVVE*MLVDDV
Trigger: GACGTCATCAACAAGCATTCATTCAACAACTTCCGC...CTGCCTGCACTGTCTGGCCTGGTGGCCACACGACCAGGACTGAGAATAGCCTTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR TCA 90 bp GGTGCAGGCTTCATAGTATTTGAAGGCGGGGATTGCAGAGAGTCGGTACTCTTTGGTGATTCAGGTCGGTaGGGCCAGGACAGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: GAGFIVFEGGDCRESVLFGDSGR*GQDSSA
Trigger: AGCAGAGCTGTCCTGGCCTCACCGACCTGAATCACC...AAAGAGTACCGACTCTCTGCAATCCCCGCCTTCAAATACTATGAAGCCTGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR TCA 90 bp CTGAAGTACAGTGTCAGTGGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCGGCCATGGATCAGGGTaGCCCCTTGCTTTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: LKYSVSGLKSFDCFHCFCGHGSG*PLAFPL
Trigger: AAGGGGGAAAGCAAGGGGTCACCCTGATCCATGGCC...GCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACTGACACTGTACTTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR GCA 90 bp TATTTGAAGGCGGGGATTGCAGAGAGTCGGTACTCTTTCTCCATCTCCTTCTCTCCGAGGACCAGCAGATaGGAGAGTGAGGAGGCGAGG +
Preference number: 4 (lower is better)
Translates to: YLKAGIAESRYSFSISFSPRTSR*ESEEAR
Trigger: CCTCGCCTCCTCACTCTCGCATCTGCTGGTCCTCGG...AGAGAAGGAGATGGAGAAAGAGTACCGACTCTCTGCAATCCCCGCCTTCAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp GACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGGCGTTTGCTGCCAACTaGGGCAGCAGTGCAGGCCGT +
Preference number: 4 (lower is better)
Translates to: DINGLQTPQSLFIEVLRRAFAAN*GSSAGR
Trigger: ACGGCCTGCACTGCTGCCGCAGTTGGCAGCAAACGC...CCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp AAATCATGGAGGACACATTGGGAGCTTGGAAAGGGCAGTCTGATGATGTTGGGAGCGTTTGCTGCCAACTaGGGCAGCAGTGCAGGCCGT +
Preference number: 4 (lower is better)
Translates to: KSWRTHWELGKGSLMMLGAFAAN*GSSAGR
Trigger: ACGGCCTGCACTGCTGCCGCAGTTGGCAGCAAACGC...TCCCAACATCATCAGACTGCCCTTTCCAAGCTCCCAATGTGTCCTCCATGATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAAGAACAGCACTGCGTTTaGTGCCAACTGCGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQEQHCV*CQLRQQ
Trigger: CTGCTGCCGCAGTTGGCAGCAAACGCAGTGCTGTTC...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp GAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGTAGGTGCAGAGCTGCCCTTCTTGTGGTACACTCCTaGCACGTTCCCGCACAGGAA +
Preference number: 4 (lower is better)
Translates to: EVQFVSSLCSGSRCRAALLVVHS*HVPAQE
Trigger: TTCCTGTGCGGGAACGTGGCAGGAGTGTACCACAAG...AAGGGCAGCTCTGCACCTACTTCCTGAACACAGACTTGACACGAACTGGACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAACCGTGCCATGATCTCTaGCTTCATCTCTCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQPCHDL*LHLSGQ
Trigger: CTGGCCCGAGAGATGAAGGCAGAGATCATGGCACGG...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATGACCCCTGTCCTGCCTaGAGCCGTGCCATGATCTCT +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNDPCPA*SRAMIS
Trigger: AGAGATCATGGCACGGCTGCAGGCAGGACAGGGGTC...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAAAGTACGCTGCCTGAGTaGACGCCCACACGCATGTTG +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQSTLPE*TPTRML
Trigger: CAACATGCGTGTGGGCGTGCACTCAGGCAGCGTACT...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATCTCCACACAGTACGCTaGCTGAGTGCACGCCCACAC +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNLHTVR*LSARPH
Trigger: GTGTGGGCGTGCACTCAGGCAGCGTACTGTGTGGAG...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp CTGAAGTACAGTGTCAGTGGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCCTCCACACAGTACGCTaGCTGAGTGCACGCCCACAC +
Preference number: 4 (lower is better)
Translates to: LKYSVSGLKSFDCFHCFCLHTVR*LSARPH
Trigger: GTGTGGGCGTGCACTCAGGCAGCGTACTGTGTGGAG...GCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACTGACACTGTACTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATCCCTGGTACACCGCCTaGCTCCATGTGGTTAGCCAG +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNPWYTA*LHVVSQ
Trigger: CTGGCTAACCACATGGAGGCAGGCGGTGTACCAGGG...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATGTAGCCCCTGTGATGTaGACTCGCCCTGGTACACCG +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNVAPVM*TRPGTP
Trigger: CGGTGTACCAGGGCGAGTGCACATCACAGGGGCTAC...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAACCGATGCTCCATGCCTaGGTCCTCCACAGCATAAGC +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQPMLHA*VLHSIS
Trigger: GCTTATGCTGTGGAGGACGCAGGCATGGAGCATCGG...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp CAGTGTCAGTGGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCGAGTTGAGCCGATGCTCCATGCCTaGGTCCTCCACAGCATAAGC +
Preference number: 4 (lower is better)
Translates to: QCQWVEVLRLLPLFLRVEPMLHA*VLHSIS
Trigger: GCTTATGCTGTGGAGGACGCAGGCATGGAGCATCGG...CTCAACTCGCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACTGACACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATGGTCCCGATGCTCCATaGCTGCGTCCTCCACAGCAT +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNGPDAP*LRPPQH
Trigger: ATGCTGTGGAGGACGCAGGCATGGAGCATCGGGACC...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp AATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGGGTCCCGATGCTCCATaGCTGCGTCCTCCACAGCAT +
Preference number: 4 (lower is better)
Translates to: NGLQTPQSLFIEVLRRRVGPDAP*LRPPQH
Trigger: ATGCTGTGGAGGACGCAGGCATGGAGCATCGGGACC...CACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAACTCATCCTCCTCCTCTaGCCGTGGATCGATGACCAG +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQLILLL*PWIDDQ
Trigger: CTGGTCATCGATCCACGGGCAGAGGAGGAGGATGAG...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp GAGGAGGAAGAGGAGGAAGGTGATGCTATACGTGATGGCCAGAGCTGGGGGCCTTGCTTCCACTGTTTCTaGGAGTTGAGCTGCTCAATG +
Preference number: 4 (lower is better)
Translates to: EEEEEEGDAIRDGQSWGPCFHCF*ELSCSM
Trigger: CATTGAGCAGCTCAACTCGCAGAAACAGTGGAAGCA...AGGCCCCCAGCTCTGGCCATCACGTATAGCATCACCTTCCTCCTCTTCCTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp AGCAGTGATGGACGCATCTTGAGGCCCTCAAGCGAGGACAGCAAGCCTCCTGCATTTGAAGGCGGGGATTaGAGAGAGTCGGTACTCTTT +
Preference number: 4 (lower is better)
Translates to: SSDGRILRPSSEDSKPPAFEGGD*RESVLF
Trigger: AAAGAGTACCGACTCTCTGCAATCCCCGCCTTCAAA...TGCAGGAGGCTTGCTGTCCTCGCTTGAGGGCCTCAAGATGCGTCCATCACTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAAGGAGGATGGTGGCGGTaGCCAAGGCTATTCTCAGTC +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQGGWWR*PRLFSV
Trigger: GACTGAGAATAGCCTTGGGCACCGCCACCATCCTCC...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAACCCAGCGTGCAGCAGTaGATGGAGTATGGGACACTG +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQPSVQQ*MEYGTL
Trigger: CAGTGTCCCATACTCCATGCACTGCTGCACGCTGGG...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000644961.1
CDS-3UTR GCA 90 bp CGCATCTTGAGGCCCTCAAGCGAGGACAGCAAGCCTCCTGCAGTGCCCTTCTCACAGTCACTTGGATTTTaGCAAGGACTCCTGTACTCT +
Preference number: 4 (lower is better)
Translates to: RILRPSSEDSKPPAVPFSQSLGF*QGLLYS
Trigger: AGAGTACAGGAGTCCTTGGCAAAATCCAAGTGACTG...TGAGAAGGGCACTGCAGGAGGCTTGCTGTCCTCGCTTGAGGGCCTCAAGATGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp GAGCAGCAGCAGCTTCAGCTCGAAGCTCATGTGCAGAAAGAGGGAGCAGGAGAGTGTTCAGGAAGTAGGTaGAGAGCTGCCCTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: EQQQLQLEAHVQKEGAGECSGSR*RAALCL
Trigger: AAGGCAAAGGGCAGCTCTGCACCTACTTCCTGAACA...CTCTCCTGCTCCCTCTTTCTGCACATGAGCTTCGAGCTGAAGCTGCTGCTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp CCAATAACTCCAGCTACTACGGGTCCATGGTTCAACCCCACTCGCAGGCGGAAGTGTTCAGGAAGTAGGTaGAGAGCTGCCCTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: PITPATTGPWFNPTRRRKCSGSR*RAALCL
Trigger: AAGGCAAAGGGCAGCTCTGCACCTACTTCCTGAACA...CTTCCGCCTGCGAGTGGGGTTGAACCATGGACCCGTAGTAGCTGGAGTTATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp CAGTGTCAGTGGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCGAGTTGAGAGGCCAGGACAGCTCTaGTGTATCCCATCTCACCCC +
Preference number: 4 (lower is better)
Translates to: QCQWVEVLRLLPLFLRVERPGQL*CIPSHP
Trigger: GGGGTGAGATGGGATACAGCAGAGCTGTCCTGGCCT...CTCAACTCGCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACTGACACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR CCA 90 bp ACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGCGCGCACAGCACAGTaGTCAGGAAGCTCGGGTCTG +
Preference number: 4 (lower is better)
Translates to: TSMGSRHPRVSLLRFLEGARTAQ*SGSSGL
Trigger: CAGACCCGAGCTTCCTGACCACTGTGCTGTGCGCGC...GCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp AGGAGCAGCAGCAGCTTCAGCTCGAAGCTCATGTGCAGAAAGAGGGAGCAGGAGAAGAGAAGGTGTTCCTaGTGCTTCTTCTCGGTGTCC +
Preference number: 4 (lower is better)
Translates to: RSSSSFSSKLMCRKREQEKRRCS*CFFSVS
Trigger: GGACACCGAGAAGAAGCACCAGGAACACCTTCTCTT...CTCCTGCTCCCTCTTTCTGCACATGAGCTTCGAGCTGAAGCTGCTGCTGCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp GAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGTAGGTGCAGAGCTGCCCTTACGCAGTTGATGGCATaGTCTGGCAGTGAGAGTGGC +
Preference number: 4 (lower is better)
Translates to: EVQFVSSLCSGSRCRAALTQLMA*SGSESG
Trigger: GCCACTCTCACTGCCAGACCATGCCATCAACTGCGT...AAGGGCAGCTCTGCACCTACTTCCTGAACACAGACTTGACACGAACTGGACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
CDS-3UTR CCA 90 bp AATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGGATGTGCACTCGCCCTaGTACACCGCCTGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: NGLQTPQSLFIEVLRRRVDVHSP*YTACLH
Trigger: ATGGAGGCAGGCGGTGTACCAGGGCGAGTGCACATC...CACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATGATGTGCACTCGCCCTaGTACACCGCCTGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNDVHSP*YTACLH
Trigger: ATGGAGGCAGGCGGTGTACCAGGGCGAGTGCACATC...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp CTGAAGTACAGTGTCAGTGGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCGATGTGCACTCGCCCTaGTACACCGCCTGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: LKYSVSGLKSFDCFHCFCDVHSP*YTACLH
Trigger: ATGGAGGCAGGCGGTGTACCAGGGCGAGTGCACATC...GCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACTGACACTGTACTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATTCTCCGTGGCTCAGGTaGGCAAAAGGCTTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNSPWLR*AKGLAA
Trigger: CGCAGCCAAGCCTTTTGCCCACCTGAGCCACGGAGA...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp GGTGCAGGCTTCATAGTATTTGAAGGCGGGGATTGCAGAGAGTCGGTACTCTTTTCTCCGTGGCTCAGGTaGGCAAAAGGCTTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: GAGFIVFEGGDCRESVLFSPWLR*AKGLAA
Trigger: CGCAGCCAAGCCTTTTGCCCACCTGAGCCACGGAGA...AAAGAGTACCGACTCTCTGCAATCCCCGCCTTCAAATACTATGAAGCCTGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp CTGAAGTACAGTGTCAGTGGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCTCTCCGTGGCTCAGGTaGGCAAAAGGCTTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: LKYSVSGLKSFDCFHCFCSPWLR*AKGLAA
Trigger: CGCAGCCAAGCCTTTTGCCCACCTGAGCCACGGAGA...GCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACTGACACTGTACTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp TCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTCTCCGTGGCTCAGGTaGGCAAAAGGCTTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: SMGSRHPRVSLLRFLEGESPWLR*AKGLAA
Trigger: CGCAGCCAAGCCTTTTGCCCACCTGAGCCACGGAGA...CTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp AATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGACAGGGCTGTCTCCGTaGCTCAGGTGGGCAAAAGGC +
Preference number: 4 (lower is better)
Translates to: NGLQTPQSLFIEVLRRRVTGLSP*LRWAKG
Trigger: GCCTTTTGCCCACCTGAGCCACGGAGACAGCCCTGT...CACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATACAGGGCTGTCTCCGTaGCTCAGGTGGGCAAAAGGC +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNTGLSP*LRWAKG
Trigger: GCCTTTTGCCCACCTGAGCCACGGAGACAGCCCTGT...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATCGATCCAGGCTCCACTaGGTGCTGAAGGAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNRSRLH*VLKEAR
Trigger: CCTGGCTTCCTTCAGCACCCAGTGGAGCCTGGATCG...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp CTGAAGTACAGTGTCAGTGGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCCGATCCAGGCTCCACTaGGTGCTGAAGGAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: LKYSVSGLKSFDCFHCFCRSRLH*VLKEAR
Trigger: CCTGGCTTCCTTCAGCACCCAGTGGAGCCTGGATCG...GCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACTGACACTGTACTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp TCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGCGATCCAGGCTCCACTaGGTGCTGAAGGAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: SMGSRHPRVSLLRFLEGERSRLH*VLKEAR
Trigger: CCTGGCTTCCTTCAGCACCCAGTGGAGCCTGGATCG...CTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp TCTTCTTCCACAGGAAGTCCAGGCGGCAGTAGTACTCATTCTGGCGAGCCAGGAAGCTGCTCAATGACCTaGAAGAACTTGGCATCCCCG +
Preference number: 4 (lower is better)
Translates to: SSSTGSPGGSSTHSGEPGSCSMT*KNLASP
Trigger: CGGGGATGCCAAGTTCTTCCAGGTCATTGAGCAGCT...TCCTGGCTCGCCAGAATGAGTACTACTGCCGCCTGGACTTCCTGTGGAAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
CDS-3UTR CCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATTCAGTCCTGGTCGTGTaGCCACCAGGCCAGACAGTG +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNSVLVV*PPGQTV
Trigger: CACTGTCTGGCCTGGTGGCCACACGACCAGGACTGA...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp GGTGCAGGCTTCATAGTATTTGAAGGCGGGGATTGCAGAGAGTCGGTACTCTTTTCAGTCCTGGTCGTGTaGCCACCAGGCCAGACAGTG +
Preference number: 4 (lower is better)
Translates to: GAGFIVFEGGDCRESVLFSVLVV*PPGQTV
Trigger: CACTGTCTGGCCTGGTGGCCACACGACCAGGACTGA...AAAGAGTACCGACTCTCTGCAATCCCCGCCTTCAAATACTATGAAGCCTGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp AATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGGGCTATTCTCAGTCCTaGTCGTGTGGCCACCAGGCC +
Preference number: 4 (lower is better)
Translates to: NGLQTPQSLFIEVLRRRVGYSQS*SCGHQA
Trigger: GGCCTGGTGGCCACACGACCAGGACTGAGAATAGCC...CACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp AGATTAAGGGCATGTGGGAACACTCACTGGGACACTGATGAGAGGCAGAGACCCAGACAAGGAGGATGGTaGCGGTGCCCAAGGCTATTC +
Preference number: 4 (lower is better)
Translates to: RLRACGNTHWDTDERQRPRQGGW*RCPRLF
Trigger: GAATAGCCTTGGGCACCGCCACCATCCTCCTTGTCT...GGGTCTCTGCCTCTCATCAGTGTCCCAGTGAGTGTTCCCACATGCCCTTAATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR CCA 90 bp CCAATAACTCCAGCTACTACGGGTCCATGGTTCAACCCCACTCGCAGGCGGAAGGCTCCCAGGAGAGGTTaGAAATCATGGAGGACACAT +
Preference number: 4 (lower is better)
Translates to: PITPATTGPWFNPTRRRKAPRRG*KSWRTH
Trigger: ATGTGTCCTCCATGATTTCCAACCTCTCCTGGGAGC...CTTCCGCCTGCGAGTGGGGTTGAACCATGGACCCGTAGTAGCTGGAGTTATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp TCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTCCGACAGCCAGGCATaGGAGTGCAGGAAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: SMGSRHPRVSLLRFLEGESDSQA*ECRKRE
Trigger: CTCCCTCTTCCTGCACTCCCATGCCTGGCTGTCGGA...CTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp ATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGATCAGCACTCCGGGCCTaGAGTCCAAGGGGCCCAGAT +
Preference number: 4 (lower is better)
Translates to: INGLQTPQSLFIEVLRRRSALRA*SPRGPD
Trigger: ATCTGGGCCCCTTGGACTCCAGGCCCGGAGTGCTGA...TCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310677.8
ENST00000644961.1
CDS-3UTR CCA 90 bp CTGAAGTACAGTGTCAGTGGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCTTCTGGCCAATGAACTaGGGGGCCACGTGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: LKYSVSGLKSFDCFHCFCFWPMN*GATCAG
Trigger: CCCTGCACACGTGGCCCCCCAGTTCATTGGCCAGAA...GCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACTGACACTGTACTTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATTTCTGGCCAATGAACTaGGGGGCCACGTGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNFWPMN*GATCAG
Trigger: CCCTGCACACGTGGCCCCCCAGTTCATTGGCCAGAA...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp TGGGAAGAAGAACAGGCTGGTAATGGCCATGGCAAAGACAAGGAGGATGGTGGCACCATAGTGCCAAGGTaGCTGCAGCTCCGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: WEEEQAGNGHGKDKEDGGTIVPR*LQLRSA
Trigger: TGCTGAACGGAGCTGCAGCCACCTTGGCACTATGGT...GCCACCATCCTCCTTGTCTTTGCCATGGCCATTACCAGCCTGTTCTTCTTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp AGATTAAGGGCATGTGGGAACACTCACTGGGACACTGATGAGAGGCAGAGACCCACCATAGTGCCAAGGTaGCTGCAGCTCCGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: RLRACGNTHWDTDERQRPTIVPR*LQLRSA
Trigger: TGCTGAACGGAGCTGCAGCCACCTTGGCACTATGGT...GGGTCTCTGCCTCTCATCAGTGTCCCAGTGAGTGTTCCCACATGCCCTTAATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR CCA 90 bp GAGGAGGAAGAGGAGGAAGGTGATGCTATACGTGATGGCCAGAGCTGGGGGCCTGTCTCCTCAGTCACTTaGATTTTGCCAAGGACTCCT +
Preference number: 4 (lower is better)
Translates to: EEEEEEGDAIRDGQSWGPVSSVT*ILPRTP
Trigger: AGGAGTCCTTGGCAAAATCCAAGTGACTGAGGAGAC...AGGCCCCCAGCTCTGGCCATCACGTATAGCATCACCTTCCTCCTCTTCCTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAAGCGCCCCCAACCTCGTaGCAATCCCGTCTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQAPPTS*QSRLLF
Trigger: AAAAAGGAGACGGGATTGCCACGAGGTTGGGGGCGC...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418030.7
CDS-3UTR CCA 90 bp AGTGGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCGAGTTGAGCTGCTCAGGCCCAGGTCCTATCTaGGAGACAGGGGGCATCATA +
Preference number: 4 (lower is better)
Translates to: SGLKSFDCFHCFCELSCSGPGPI*ETGGII
Trigger: TATGATGCCCCCTGTCTCCCAGATAGGACCTGGGCC...TGAGCAGCTCAACTCGCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR CCA 90 bp TCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGGGCAGGGGTCAGGAGTaGGCATGTCCCATAGGCAGA +
Preference number: 4 (lower is better)
Translates to: SMGSRHPRVSLLRFLEGEGRGQE*ACPIGR
Trigger: TCTGCCTATGGGACATGCCCACTCCTGACCCCTGCC...CTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR CCA 90 bp ATCTCCTTCTCTCTGAAGTACAGTGTCAGTGGGTTGAAGTCCTTCGACTGCTTCGCGTGCAGCAGTGCATaGAGTACTGTGGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: ISFSLKYSVSGLKSFDCFACSSA*STVGPG
Trigger: GCCTGGCCCCACAGTACTCCATGCACTGCTGCACGC...GAAGCAGTCGAAGGACTTCAACCCACTGACACTGTACTTCAGAGAGAAGGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR CCA 90 bp GGTGCCCAAGGCTATTCTCAGTCCTGGTCGTGTGGCCACCAGGCCAGACAGTGCACTTTTTCTAAAGCATaGGCTTTCCCAGATAGGGGT +
Preference number: 4 (lower is better)
Translates to: GAQGYSQSWSCGHQARQCTFSKA*AFPDRG
Trigger: ACCCCTATCTGGGAAAGCCCATGCTTTAGAAAAAGT...GCACTGTCTGGCCTGGTGGCCACACGACCAGGACTGAGAATAGCCTTGGGCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
3UTR CAA 72 bp AAGAAGAAGATGAAGAAGGAGATAGCACCCATCAGTTaGGGCTCCTTCAGCACTCCGGGCCTGAAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: KKKMKKEIAPIS*GSFSTPGLKGP
Trigger: TGGCCCCTTCAGGCCCGGAGTGCTGAAGGAGCCCAAACTGATGGGTGCTATCTCCTTCTTCATCTTCTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR TCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATCCTGCAGCCGTGCCATaGTCTCTGCCTTCATCTCTC +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNPAAVP*SLPSSL
Trigger: GAGAGATGAAGGCAGAGATCATGGCACGGCTGCAGG...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp CTGAAGTACAGTGTCAGTGGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCCCTGCAGCCGTGCCATaGTCTCTGCCTTCATCTCTC +
Preference number: 4 (lower is better)
Translates to: LKYSVSGLKSFDCFHCFCPAAVP*SLPSSL
Trigger: GAGAGATGAAGGCAGAGATCATGGCACGGCTGCAGG...GCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACTGACACTGTACTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR TCA 90 bp ATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAACACAGTACGCTGCCTaGGTGCACGCCCACACGCAT +
Preference number: 4 (lower is better)
Translates to: INGLQTPQSLFIEVLRRRTQYAA*VHAHTH
Trigger: ATGCGTGTGGGCGTGCACTCAGGCAGCGTACTGTGT...TCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp GACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGACACAGTACGCTGCCTaGGTGCACGCCCACACGCAT +
Preference number: 4 (lower is better)
Translates to: DINGLQTPQSLFIEVLRRTQYAA*VHAHTH
Trigger: ATGCGTGTGGGCGTGCACTCAGGCAGCGTACTGTGT...CCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp AATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGACTTCTGCAGCCCGATaGCTCCACACAGTACGCTGC +
Preference number: 4 (lower is better)
Translates to: NGLQTPQSLFIEVLRRRVTSAAR*LHTVRC
Trigger: GCAGCGTACTGTGTGGAGTCATCGGGCTGCAGAAGT...CACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATACTTCTGCAGCCCGATaGCTCCACACAGTACGCTGC +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNTSAAR*LHTVRC
Trigger: GCAGCGTACTGTGTGGAGTCATCGGGCTGCAGAAGT...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp AATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGGTGATGGACGCATCTTaGGGCCCTCAAGCGAGGACA +
Preference number: 4 (lower is better)
Translates to: NGLQTPQSLFIEVLRRRVVMDAS*GPQART
Trigger: TGTCCTCGCTTGAGGGCCTCAAGATGCGTCCATCAC...CACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATGTGATGGACGCATCTTaGGGCCCTCAAGCGAGGACA +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNVMDAS*GPQART
Trigger: TGTCCTCGCTTGAGGGCCTCAAGATGCGTCCATCAC...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp CTGAAGTACAGTGTCAGTGGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCGTGATGGACGCATCTTaGGGCCCTCAAGCGAGGACA +
Preference number: 4 (lower is better)
Translates to: LKYSVSGLKSFDCFHCFCVMDAS*GPQART
Trigger: TGTCCTCGCTTGAGGGCCTCAAGATGCGTCCATCAC...GCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACTGACACTGTACTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR TCA 90 bp CTGAAGTACAGTGTCAGTGGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCACGGGTCATCAGCAGTaGTGGACGCATCTTGAGGCC +
Preference number: 4 (lower is better)
Translates to: LKYSVSGLKSFDCFHCFCTGHQQ*WTHLEA
Trigger: GGCCTCAAGATGCGTCCATCACTGCTGATGACCCGT...GCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACTGACACTGTACTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR TCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATACGGGTCATCAGCAGTaGTGGACGCATCTTGAGGCC +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNTGHQQ*WTHLEA
Trigger: GGCCTCAAGATGCGTCCATCACTGCTGATGACCCGT...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp AAATCATGGAGGACACATTGGGAGCTTGGAAAGGGCAGTCTGATGATGTTGGGAGATAGAGGCGGACGATaGGGCATTCCGACAGCCAGG +
Preference number: 4 (lower is better)
Translates to: KSWRTHWELGKGSLMMLGDRGGR*GIPTAR
Trigger: CCTGGCTGTCGGAATGCCTCATCGTCCGCCTCTATC...TCCCAACATCATCAGACTGCCCTTTCCAAGCTCCCAATGTGTCCTCCATGATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR TCA 90 bp ATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGATAGAGGCGGACGATaGGGCATTCCGACAGCCAGG +
Preference number: 4 (lower is better)
Translates to: INGLQTPQSLFIEVLRRRDRGGR*GIPTAR
Trigger: CCTGGCTGTCGGAATGCCTCATCGTCCGCCTCTATC...TCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp AAGGAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGTAGGTGCAGAGCTGCCCTTGAAGTCTGGGACTaGGGCGAAGAGGACACAAAC +
Preference number: 4 (lower is better)
Translates to: KEVQFVSSLCSGSRCRAALEVWD*GEEDTN
Trigger: GTTTGTGTCCTCTTCGCCTCAGTCCCAGACTTCAAG...GGCAGCTCTGCACCTACTTCCTGAACACAGACTTGACACGAACTGGACCTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR TCA 90 bp TCCGTTCAGCATCCTGTTGTGCATCCTGTCCAGAGGTGGCATTTAAGCCTGTGGCTTGAAGTCTGGGACTaGGGCGAAGAGGACACAAAC +
Preference number: 4 (lower is better)
Translates to: SVQHPVVHPVQRWHLSLWLEVWD*GEEDTN
Trigger: GTTTGTGTCCTCTTCGCCTCAGTCCCAGACTTCAAG...CCACAGGCTTAAATGCCACCTCTGGACAGGATGCACAACAGGATGCTGAACGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR TCA 90 bp GAGGAGGAAGAGGAGGAAGGTGATGCTATACGTGATGGCCAGAGCTGGGGGCCTCAGCAATTATCTCATTaGGCAGCCTCAGACACTCTA +
Preference number: 4 (lower is better)
Translates to: EEEEEEGDAIRDGQSWGPQQLSH*AASDTL
Trigger: TAGAGTGTCTGAGGCTGCTCAATGAGATAATTGCTG...AGGCCCCCAGCTCTGGCCATCACGTATAGCATCACCTTCCTCCTCTTCCTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR TCA 90 bp ATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCTCTTCTCCACCCCACTaGACTTGGGCTTGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: MGSRHPRVSLLRFLEGECSSPPH*TWAWRA
Trigger: TGCTCTCCAAGCCCAAGTTCAGTGGGGTGGAGAAGA...GCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp CCCAGGGCCACGGCAAATTCCACCATAGTGCCAAGGTGGCTGCAGCTCCGTTCAGATACACACTGGGTGTaGCTTATGTCTGTTCTAATC +
Preference number: 4 (lower is better)
Translates to: PRATANSTIVPRWLQLRSDTHWV*LMSVLI
Trigger: GATTAGAACAGACATAAGTCACACCCAGTGTGTATC...TGAACGGAGCTGCAGCCACCTTGGCACTATGGTGGAATTTGCCGTGGCCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR GCA 90 bp CAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATCTCAGCAGCACTGCGTTTGCTaGCAACTGCGGCAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: QTPQSLFIEVLRRRVQSQQHCVC*QLRQQC
Trigger: GCACTGCTGCCGCAGTTGGCAGCAAACGCAGTGCTG...CTGAGATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR GCA 90 bp AATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGGAACAGCACTGCGTTTaGTGCCAACTGCGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: NGLQTPQSLFIEVLRRRVEQHCV*CQLRQQ
Trigger: CTGCTGCCGCAGTTGGCAGCAAACGCAGTGCTGTTC...CACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATGCACAGGAACAGCACTaGGTTTGCTGCCAACTGCGG +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNAQEQH*VCCQLR
Trigger: CCGCAGTTGGCAGCAAACGCAGTGCTGTTCCTGTGC...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAACTTGTGGTACACTCCTaGCACGTTCCCGCACAGGAA +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQLVVHS*HVPAQE
Trigger: TTCCTGTGCGGGAACGTGGCAGGAGTGTACCACAAG...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp GAAGATGAAGAAGGAGATAGCACCCATCAGTTTGGGCTCCTTCAGCACTCCGGGAGAAGGTGTTCCTGGTaGTTCTTCTCGGTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: EDEEGDSTHQFGLLQHSGRRCSW*FFSVSS
Trigger: GCTGGACACCGAGAAGAAGCACCAGGAACACCTTCT...CCCGGAGTGCTGAAGGAGCCCAAACTGATGGGTGCTATCTCCTTCTTCATCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp CAGCCTAGGGTAGCTGAAGGAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGAGAAGGTGTTCCTGGTaGTTCTTCTCGGTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: QPRVAEGGPVRVKSVFRKRRCSW*FFSVSS
Trigger: GCTGGACACCGAGAAGAAGCACCAGGAACACCTTCT...CTTCCTGAACACAGACTTGACACGAACTGGACCTCCTTCAGCTACCCTAGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp TGGAGGACACATTGGGAGCTTGGAAAGGGCAGTCTGATGATGTTGGGAAGAAGACCGTGCCATGATCTCTaGCTTCATCTCTCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: WRTHWELGKGSLMMLGRRPCHDL*LHLSGQ
Trigger: CTGGCCCGAGAGATGAAGGCAGAGATCATGGCACGG...TCTTCTTCCCAACATCATCAGACTGCCCTTTCCAAGCTCCCAATGTGTCCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp AGTGGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCGAGTTGAGCTGCTCATCCTGCCTGCAGCCGTaGCATGATCTCTGCCTTCAT +
Preference number: 4 (lower is better)
Translates to: SGLKSFDCFHCFCELSCSSCLQP*HDLCLH
Trigger: ATGAAGGCAGAGATCATGGCACGGCTGCAGGCAGGA...TGAGCAGCTCAACTCGCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp GACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGGACCCCTGTCCTGCCTaGAGCCGTGCCATGATCTCT +
Preference number: 4 (lower is better)
Translates to: DINGLQTPQSLFIEVLRRDPCPA*SRAMIS
Trigger: AGAGATCATGGCACGGCTGCAGGCAGGACAGGGGTC...CCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp ACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGACCCCTGTCCTGCCTaGAGCCGTGCCATGATCTCT +
Preference number: 4 (lower is better)
Translates to: TSMGSRHPRVSLLRFLEGDPCPA*SRAMIS
Trigger: AGAGATCATGGCACGGCTGCAGGCAGGACAGGGGTC...GCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp CAGACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGTCCACGCCAGTGGCTaGCCGCAGTTTCCTGATGGC +
Preference number: 4 (lower is better)
Translates to: QTSMGSRHPRVSLLRFLEVHASG*PQFPDG
Trigger: GCCATCAGGAAACTGCGGGCAGCCACTGGCGTGGAC...TTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310677.8
ENST00000644961.1
CDS-3UTR GCA 90 bp ACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCCTCCACACAGTACGCTaGCTGAGTGCACGCCCACAC +
Preference number: 4 (lower is better)
Translates to: TSMGSRHPRVSLLRFLEGLHTVR*LSARPH
Trigger: GTGTGGGCGTGCACTCAGGCAGCGTACTGTGTGGAG...GCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp ACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCCCCTGGTACACCGCCTaGCTCCATGTGGTTAGCCAG +
Preference number: 4 (lower is better)
Translates to: TSMGSRHPRVSLLRFLEGPWYTA*LHVVSQ
Trigger: CTGGCTAACCACATGGAGGCAGGCGGTGTACCAGGG...GCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp ATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTAGCCCCTGTGATGTaGACTCGCCCTGGTACACCG +
Preference number: 4 (lower is better)
Translates to: INGLQTPQSLFIEVLRRRVAPVM*TRPGTP
Trigger: CGGTGTACCAGGGCGAGTGCACATCACAGGGGCTAC...TCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp ACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGTAGCCCCTGTGATGTaGACTCGCCCTGGTACACCG +
Preference number: 4 (lower is better)
Translates to: TSMGSRHPRVSLLRFLEGVAPVM*TRPGTP
Trigger: CGGTGTACCAGGGCGAGTGCACATCACAGGGGCTAC...GCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATCCGATGCTCCATGCCTaGGTCCTCCACAGCATAAGC +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNPMLHA*VLHSIS
Trigger: GCTTATGCTGTGGAGGACGCAGGCATGGAGCATCGG...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATGGACAGCAAGCCTCCTaGAGTGCCCTTCTCATCCTC +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNGQQAS*SALLIL
Trigger: GAGGATGAGAAGGGCACTGCAGGAGGCTTGCTGTCC...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp CTGAAGTACAGTGTCAGTGGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCGGACAGCAAGCCTCCTaGAGTGCCCTTCTCATCCTC +
Preference number: 4 (lower is better)
Translates to: LKYSVSGLKSFDCFHCFCGQQAS*SALLIL
Trigger: GAGGATGAGAAGGGCACTGCAGGAGGCTTGCTGTCC...GCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACTGACACTGTACTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp AATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGGGACAGCAAGCCTCCTaGAGTGCCCTTCTCATCCTC +
Preference number: 4 (lower is better)
Translates to: NGLQTPQSLFIEVLRRRVGQQAS*SALLIL
Trigger: GAGGATGAGAAGGGCACTGCAGGAGGCTTGCTGTCC...CACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp GAAGTCCAGGCGGCAGTAGTACTCATTCTGGCGAGCCAGGACAAGGAGGGTGAATTTGAAGGCGGGGATTaGAGAGAGTCGGTACTCTTT +
Preference number: 4 (lower is better)
Translates to: EVQAAVVLILASQDKEGEFEGGD*RESVLF
Trigger: AAAGAGTACCGACTCTCTGCAATCCCCGCCTTCAAA...TTCACCCTCCTTGTCCTGGCTCGCCAGAATGAGTACTACTGCCGCCTGGACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
CDS-3UTR GCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATAGTGCAGGCAGCCAGTaGAGCATCTTGGGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNSAGSQ*SILGPF
Trigger: GAAAGGCCCCAAGATGCTGCACTGGCTGCCTGCACT...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp CTGAAGTACAGTGTCAGTGGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCAGTGCAGGCAGCCAGTaGAGCATCTTGGGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: LKYSVSGLKSFDCFHCFCSAGSQ*SILGPF
Trigger: GAAAGGCCCCAAGATGCTGCACTGGCTGCCTGCACT...GCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACTGACACTGTACTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp GGTGCAGGCTTCATAGTATTTGAAGGCGGGGATTGCAGAGAGTCGGTACTCTTTGGAGGATGGTGGCGGTaGCCAAGGCTATTCTCAGTC +
Preference number: 4 (lower is better)
Translates to: GAGFIVFEGGDCRESVLFGGWWR*PRLFSV
Trigger: GACTGAGAATAGCCTTGGGCACCGCCACCATCCTCC...AAAGAGTACCGACTCTCTGCAATCCCCGCCTTCAAATACTATGAAGCCTGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAAAGAGGAAGCCCAGCGTaGAGCAGTGCATGGAGTATG +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQRGSPA*SSAWSM
Trigger: CATACTCCATGCACTGCTGCACGCTGGGCTTCCTCT...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000644961.1
CDS-3UTR GCA 90 bp CAGTGTCAGTGGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCGAGTTGAGAGAGGAAGCCCAGCGTaGAGCAGTGCATGGAGTATG +
Preference number: 4 (lower is better)
Translates to: QCQWVEVLRLLPLFLRVERGSPA*SSAWSM
Trigger: CATACTCCATGCACTGCTGCACGCTGGGCTTCCTCT...CTCAACTCGCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACTGACACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
CDS-3UTR GCA 90 bp CAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATCTCAGGTCCACGCCAGTGGCTaGCCGCAGTTTCCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: QTPQSLFIEVLRRRVQSQVHASG*PQFPWQ
Trigger: TTGCCAAGGAAACTGCGGGCAGCCACTGGCGTGGAC...CTGAGATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR GCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAAAGAGGAAGCCCAGCGTaGAGCAGTGCATGGAGTACT +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQRGSPA*SSAWST
Trigger: AGTACTCCATGCACTGCTGCACGCTGGGCTTCCTCT...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR GCA 90 bp AGTGGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCGAGTTGAGCTGCTCAGCTTCCCTCCCACTTTaGCCTGTGGGTGATTCAGGT +
Preference number: 4 (lower is better)
Translates to: SGLKSFDCFHCFCELSCSASLPL*PVGDSG
Trigger: ACCTGAATCACCCACAGGGCAAAGTGGGAGGGAAGC...TGAGCAGCTCAACTCGCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR CCA 90 bp CAGACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGCGCGCACAGCACAGTaGTCAGGAAGCTCGGGTCTG +
Preference number: 4 (lower is better)
Translates to: QTSMGSRHPRVSLLRFLEARTAQ*SGSSGL
Trigger: CAGACCCGAGCTTCCTGACCACTGTGCTGTGCGCGC...TTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATCCATCAGCGCCTTGTaGTACACTCCTGCCACGTTC +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQSISAL*YTPATF
Trigger: GAACGTGGCAGGAGTGTACCACAAGGCGCTGATGGA...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAAACGCAGTTGATGGCATaGTCTGGCAGTGAGAGTGGC +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQTQLMA*SGSESG
Trigger: GCCACTCTCACTGCCAGACCATGCCATCAACTGCGT...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000644961.1
CDS-3UTR CCA 90 bp ACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGATGTGCACTCGCCCTaGTACACCGCCTGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: TSMGSRHPRVSLLRFLEGDVHSP*YTACLH
Trigger: ATGGAGGCAGGCGGTGTACCAGGGCGAGTGCACATC...GCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAACTCCTCCTCTGCCCGTaGATCGATGACCAGATAGGT +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQLLLCP*IDDQIG
Trigger: ACCTATCTGGTCATCGATCCACGGGCAGAGGAGGAG...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp TGTCTCCTCAGTCACTTGGATTTTGCCAAGGACTCCTGTACTCTCCATGCGGCTCTCCTCCTCTGCCCGTaGATCGATGACCAGATAGGT +
Preference number: 4 (lower is better)
Translates to: CLLSHLDFAKDSCTLHAALLLCP*IDDQIG
Trigger: ACCTATCTGGTCATCGATCCACGGGCAGAGGAGGAG...AGCCGCATGGAGAGTACAGGAGTCCTTGGCAAAATCCAAGTGACTGAGGAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp ATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCCTCCTCCTCTGCCCGTaGATCGATGACCAGATAGGT +
Preference number: 4 (lower is better)
Translates to: MGSRHPRVSLLRFLEGECLLLCP*IDDQIG
Trigger: ACCTATCTGGTCATCGATCCACGGGCAGAGGAGGAG...GCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp ACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCACAGGGCTGTCTCCGTaGCTCAGGTGGGCAAAAGGC +
Preference number: 4 (lower is better)
Translates to: TSMGSRHPRVSLLRFLEGTGLSP*LRWAKG
Trigger: GCCTTTTGCCCACCTGAGCCACGGAGACAGCCCTGT...GCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp CCAATAACTCCAGCTACTACGGGTCCATGGTTCAACCCCACTCGCAGGCGGAAGGAAGTACAGTGTCAGTaGGTTGAAGTCCTTCGACTG +
Preference number: 4 (lower is better)
Translates to: PITPATTGPWFNPTRRRKEVQCQ*VEVLRL
Trigger: CAGTCGAAGGACTTCAACCCACTGACACTGTACTTC...CTTCCGCCTGCGAGTGGGGTTGAACCATGGACCCGTAGTAGCTGGAGTTATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATGCCAGTGCAGCATCTTaGGGCCTTTCAGGACACACC +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNASAAS*GLSGHT
Trigger: GGTGTGTCCTGAAAGGCCCCAAGATGCTGCACTGGC...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp GACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGTCAGTCCTGGTCGTGTaGCCACCAGGCCAGACAGTG +
Preference number: 4 (lower is better)
Translates to: DINGLQTPQSLFIEVLRRSVLVV*PPGQTV
Trigger: CACTGTCTGGCCTGGTGGCCACACGACCAGGACTGA...CCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp GAGCAGCAGCAGCTTCAGCTCGAAGCTCATGTGCAGAAAGAGGGAGCAGGAGAGGACACATTGGGAGCTTaGAAAGGGCAGTCTGATGAT +
Preference number: 4 (lower is better)
Translates to: EQQQLQLEAHVQKEGAGEDTLGA*KGQSDD
Trigger: ATCATCAGACTGCCCTTTCCAAGCTCCCAATGTGTC...CTCTCCTGCTCCCTCTTTCTGCACATGAGCTTCGAGCTGAAGCTGCTGCTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp TATTTGAAGGCGGGGATTGCAGAGAGTCGGTACTCTTTCTCCATCTCCTTCTCTTCCGACAGCCAGGCATaGGAGTGCAGGAAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: YLKAGIAESRYSFSISFSSDSQA*ECRKRE
Trigger: CTCCCTCTTCCTGCACTCCCATGCCTGGCTGTCGGA...AGAGAAGGAGATGGAGAAAGAGTACCGACTCTCTGCAATCCCCGCCTTCAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp ATCTCCTTCTCTCTGAAGTACAGTGTCAGTGGGTTGAAGTCCTTCGACTGCTTCTTCTGGCCAATGAACTaGGGGGCCACGTGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: ISFSLKYSVSGLKSFDCFFWPMN*GATCAG
Trigger: CCCTGCACACGTGGCCCCCCAGTTCATTGGCCAGAA...GAAGCAGTCGAAGGACTTCAACCCACTGACACTGTACTTCAGAGAGAAGGAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp TGGGAAGAAGAACAGGCTGGTAATGGCCATGGCAAAGACAAGGAGGATGGTGGCTGGCATTTAAGCCTGTaGCTGCCATGTAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: WEEEQAGNGHGKDKEDGGWHLSL*LPCRCC
Trigger: GCAGCACCTACATGGCAGCCACAGGCTTAAATGCCA...GCCACCATCCTCCTTGTCTTTGCCATGGCCATTACCAGCCTGTTCTTCTTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp AAGGAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGTAGGTGCAGAGCTGCCTGGCATTTAAGCCTGTaGCTGCCATGTAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: KEVQFVSSLCSGSRCRAAWHLSL*LPCRCC
Trigger: GCAGCACCTACATGGCAGCCACAGGCTTAAATGCCA...GGCAGCTCTGCACCTACTTCCTGAACACAGACTTGACACGAACTGGACCTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAAACCATAGTGCCAAGGTaGCTGCAGCTCCGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQTIVPR*LQLRSA
Trigger: TGCTGAACGGAGCTGCAGCCACCTTGGCACTATGGT...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATGCTACTACGGGTCCATaGTTCAACCCCACTCGCAGG +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNATTGP*FNPTRR
Trigger: CCTGCGAGTGGGGTTGAACCATGGACCCGTAGTAGC...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp TCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGGCTACTACGGGTCCATaGTTCAACCCCACTCGCAGG +
Preference number: 4 (lower is better)
Translates to: SMGSRHPRVSLLRFLEGEATTGP*FNPTRR
Trigger: CCTGCGAGTGGGGTTGAACCATGGACCCGTAGTAGC...CTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp CAGCCTAGGGTAGCTGAAGGAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGTGCCCGCAGTTTCCTTaGCAATCTGGTCGAACTTGC +
Preference number: 4 (lower is better)
Translates to: QPRVAEGGPVRVKSVFRKCPQFP*QSGRTC
Trigger: GCAAGTTCGACCAGATTGCCAAGGAAACTGCGGGCA...CTTCCTGAACACAGACTTGACACGAACTGGACCTCCTTCAGCTACCCTAGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR CCA 90 bp TCCGTTCAGCATCCTGTTGTGCATCCTGTCCAGAGGTGGCATTTAAGCCTGTGGTGCCCGCAGTTTCCTTaGCAATCTGGTCGAACTTGC +
Preference number: 4 (lower is better)
Translates to: SVQHPVVHPVQRWHLSLWCPQFP*QSGRTC
Trigger: GCAAGTTCGACCAGATTGCCAAGGAAACTGCGGGCA...CCACAGGCTTAAATGCCACCTCTGGACAGGATGCACAACAGGATGCTGAACGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR CCA 90 bp CAGCCTAGGGTAGCTGAAGGAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGTGTGGGAACACTCACTaGGACACTGATGAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: QPRVAEGGPVRVKSVFRKCGNTH*DTDERQ
Trigger: CTGCCTCTCATCAGTGTCCCAGTGAGTGTTCCCACA...CTTCCTGAACACAGACTTGACACGAACTGGACCTCCTTCAGCTACCCTAGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR CCA 90 bp GTCCAAGGGGCCCAGATAGAGGCGGACGATGAGGCATTCCGACAGCCAGGCATGATGGGCATTCAACCCTaGAGATTAGAAAGATCAAGT +
Preference number: 4 (lower is better)
Translates to: VQGAQIEADDEAFRQPGMMGIQP*RLERSS
Trigger: ACTTGATCTTTCTAATCTCCAGGGTTGAATGCCCAT...CATGCCTGGCTGTCGGAATGCCTCATCGTCCGCCTCTATCTGGGCCCCTTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
3UTR CAA 72 bp TTCTGCGAGTTGAGCTGCTCAATGACCTGGAAGAACTaGGCATCCCCGGTGTCCAGTTCATCATCTAGTCCC +
Preference number: 4 (lower is better)
Translates to: FCELSCSMTWKN*ASPVSSSSSSP
Trigger: GGGACTAGATGATGAACTGGACACCGGGGATGCCAAGTTCTTCCAGGTCATTGAGCAGCTCAACTCGCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
3UTR CAA 72 bp AAGAAGAAGATGAAGAAGGAGATAGCACCCATCAGTTaGGGCTCCTTCAGCACTCCGGGCCTGGAGTCCAAG +
Preference number: 4 (lower is better)
Translates to: KKKMKKEIAPIS*GSFSTPGLESK
Trigger: CTTGGACTCCAGGCCCGGAGTGCTGAAGGAGCCCAAACTGATGGGTGCTATCTCCTTCTTCATCTTCTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
CDS-3UTR TCA 90 bp ATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGACCTGCAGCCGTGCCATaGTCTCTGCCTTCATCTCTC +
Preference number: 4 (lower is better)
Translates to: INGLQTPQSLFIEVLRRRPAAVP*SLPSSL
Trigger: GAGAGATGAAGGCAGAGATCATGGCACGGCTGCAGG...TCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp ACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCCCTGCAGCCGTGCCATaGTCTCTGCCTTCATCTCTC +
Preference number: 4 (lower is better)
Translates to: TSMGSRHPRVSLLRFLEGPAAVP*SLPSSL
Trigger: GAGAGATGAAGGCAGAGATCATGGCACGGCTGCAGG...GCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp ATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAGTCCCCCAGGATCTTaGTCCGCATGCATTCATGCT +
Preference number: 4 (lower is better)
Translates to: MGSRHPRVSLLRFLEGECSPPGS*SACIHA
Trigger: AGCATGAATGCATGCGGATCAAGATCCTGGGGGACT...GCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310677.8
ENST00000644961.1
CDS-3UTR TCA 90 bp ATCTCCTTCTCTCTGAAGTACAGTGTCAGTGGGTTGAAGTCCTTCGACTGCTTCACTTCTGCAGCCCGATaGCTCCACACAGTACGCTGC +
Preference number: 4 (lower is better)
Translates to: ISFSLKYSVSGLKSFDCFTSAAR*LHTVRC
Trigger: GCAGCGTACTGTGTGGAGTCATCGGGCTGCAGAAGT...GAAGCAGTCGAAGGACTTCAACCCACTGACACTGTACTTCAGAGAGAAGGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR TCA 90 bp GAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGTAGGTGCAGAGCTGCCCTTCCATCTCCTTCTCTCTaGAGTACAGTGTCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: EVQFVSSLCSGSRCRAALPSPSL*STVSVG
Trigger: ACCCACTGACACTGTACTTCAGAGAGAAGGAGATGG...AAGGGCAGCTCTGCACCTACTTCCTGAACACAGACTTGACACGAACTGGACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR TCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAACTTGAAGTCTGGGACTaGGGCGAAGAGGACACAAAC +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQLEVWD*GEEDTN
Trigger: GTTTGTGTCCTCTTCGCCTCAGTCCCAGACTTCAAG...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATTCTTCTCCACCCCACTaGACTTGGGCTTGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNSSPPH*TWAWRA
Trigger: TGCTCTCCAAGCCCAAGTTCAGTGGGGTGGAGAAGA...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp AATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGTCTTCTCCACCCCACTaGACTTGGGCTTGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: NGLQTPQSLFIEVLRRRVSSPPH*TWAWRA
Trigger: TGCTCTCCAAGCCCAAGTTCAGTGGGGTGGAGAAGA...CACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp GAAGTCCAGGCGGCAGTAGTACTCATTCTGGCGAGCCAGGACAAGGAGGGTGAAGCGGAAGTTGTTGAATaGATGCTTGTTGATGACGTC +
Preference number: 4 (lower is better)
Translates to: EVQAAVVLILASQDKEGEAEVVE*MLVDDV
Trigger: GACGTCATCAACAAGCATTCATTCAACAACTTCCGC...TTCACCCTCCTTGTCCTGGCTCGCCAGAATGAGTACTACTGCCGCCTGGACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
CDS-3UTR GCA 90 bp CAGACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAACAGCACTGCGTTTGCTaGCAACTGCGGCAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: QTSMGSRHPRVSLLRFLEQHCVC*QLRQQC
Trigger: GCACTGCTGCCGCAGTTGGCAGCAAACGCAGTGCTG...TTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp ACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAACAGCACTGCGTTTaGTGCCAACTGCGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: TSMGSRHPRVSLLRFLEGEQHCV*CQLRQQ
Trigger: CTGCTGCCGCAGTTGGCAGCAAACGCAGTGCTGTTC...GCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp ACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGCACAGGAACAGCACTaGGTTTGCTGCCAACTGCGG +
Preference number: 4 (lower is better)
Translates to: TSMGSRHPRVSLLRFLEGAQEQH*VCCQLR
Trigger: CCGCAGTTGGCAGCAAACGCAGTGCTGTTCCTGTGC...GCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp AAATCATGGAGGACACATTGGGAGCTTGGAAAGGGCAGTCTGATGATGTTGGGAGCACAGGAACAGCACTaGGTTTGCTGCCAACTGCGG +
Preference number: 4 (lower is better)
Translates to: KSWRTHWELGKGSLMMLGAQEQH*VCCQLR
Trigger: CCGCAGTTGGCAGCAAACGCAGTGCTGTTCCTGTGC...TCCCAACATCATCAGACTGCCCTTTCCAAGCTCCCAATGTGTCCTCCATGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATCTTGTGGTACACTCCTaGCACGTTCCCGCACAGGAA +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNLVVHS*HVPAQE
Trigger: TTCCTGTGCGGGAACGTGGCAGGAGTGTACCACAAG...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp CTGAAGTACAGTGTCAGTGGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCCTTGTGGTACACTCCTaGCACGTTCCCGCACAGGAA +
Preference number: 4 (lower is better)
Translates to: LKYSVSGLKSFDCFHCFCLVVHS*HVPAQE
Trigger: TTCCTGTGCGGGAACGTGGCAGGAGTGTACCACAAG...GCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACTGACACTGTACTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAAAGAAGGTGTTCCTGGTaGTTCTTCTCGGTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQRRCSW*FFSVSS
Trigger: GCTGGACACCGAGAAGAAGCACCAGGAACACCTTCT...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATTCCTGCCTGCAGCCGTaGCATGATCTCTGCCTTCAT +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNSCLQP*HDLCLH
Trigger: ATGAAGGCAGAGATCATGGCACGGCTGCAGGCAGGA...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp ATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAAGTACGCTGCCTGAGTaGACGCCCACACGCATGTTG +
Preference number: 4 (lower is better)
Translates to: INGLQTPQSLFIEVLRRRSTLPE*TPTRML
Trigger: CAACATGCGTGTGGGCGTGCACTCAGGCAGCGTACT...TCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp AAATCATGGAGGACACATTGGGAGCTTGGAAAGGGCAGTCTGATGATGTTGGGAAGTACGCTGCCTGAGTaGACGCCCACACGCATGTTG +
Preference number: 4 (lower is better)
Translates to: KSWRTHWELGKGSLMMLGSTLPE*TPTRML
Trigger: CAACATGCGTGTGGGCGTGCACTCAGGCAGCGTACT...TCCCAACATCATCAGACTGCCCTTTCCAAGCTCCCAATGTGTCCTCCATGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp GACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGAGTACGCTGCCTGAGTaGACGCCCACACGCATGTTG +
Preference number: 4 (lower is better)
Translates to: DINGLQTPQSLFIEVLRRSTLPE*TPTRML
Trigger: CAACATGCGTGTGGGCGTGCACTCAGGCAGCGTACT...CCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp ATCTCCTTCTCTCTGAAGTACAGTGTCAGTGGGTTGAAGTCCTTCGACTGCTTCAGTACGCTGCCTGAGTaGACGCCCACACGCATGTTG +
Preference number: 4 (lower is better)
Translates to: ISFSLKYSVSGLKSFDCFSTLPE*TPTRML
Trigger: CAACATGCGTGTGGGCGTGCACTCAGGCAGCGTACT...GAAGCAGTCGAAGGACTTCAACCCACTGACACTGTACTTCAGAGAGAAGGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATTCGTACTGCCACTTCTaGAGCCCGATGACTCCACAC +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNSYCHF*SPMTPH
Trigger: GTGTGGAGTCATCGGGCTGCAGAAGTGGCAGTACGA...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp CTGAAGTACAGTGTCAGTGGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCTCGTACTGCCACTTCTaGAGCCCGATGACTCCACAC +
Preference number: 4 (lower is better)
Translates to: LKYSVSGLKSFDCFHCFCSYCHF*SPMTPH
Trigger: GTGTGGAGTCATCGGGCTGCAGAAGTGGCAGTACGA...GCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACTGACACTGTACTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp CAGACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGTAGCCCCTGTGATGTaGACTCGCCCTGGTACACCG +
Preference number: 4 (lower is better)
Translates to: QTSMGSRHPRVSLLRFLEVAPVM*TRPGTP
Trigger: CGGTGTACCAGGGCGAGTGCACATCACAGGGGCTAC...TTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp GACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCCGATGCTCCATGCCTaGGTCCTCCACAGCATAAGC +
Preference number: 4 (lower is better)
Translates to: DINGLQTPQSLFIEVLRRPMLHA*VLHSIS
Trigger: GCTTATGCTGTGGAGGACGCAGGCATGGAGCATCGG...CCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp GACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCTCATCCTCCTCCTCTaGCCGTGGATCGATGACCAG +
Preference number: 4 (lower is better)
Translates to: DINGLQTPQSLFIEVLRRLILLL*PWIDDQ
Trigger: CTGGTCATCGATCCACGGGCAGAGGAGGAGGATGAG...CCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp ATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGACTCATCCTCCTCCTCTaGCCGTGGATCGATGACCAG +
Preference number: 4 (lower is better)
Translates to: INGLQTPQSLFIEVLRRRLILLL*PWIDDQ
Trigger: CTGGTCATCGATCCACGGGCAGAGGAGGAGGATGAG...TCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp ATGAAGAAGGAGATAGCACCCATCAGTTTGGGCTCCTTCAGCACTCCGGGCCTGTGCTTCCACTGTTTCTaGGAGTTGAGCTGCTCAATG +
Preference number: 4 (lower is better)
Translates to: MKKEIAPISLGSFSTPGLCFHCF*ELSCSM
Trigger: CATTGAGCAGCTCAACTCGCAGAAACAGTGGAAGCA...CAGGCCCGGAGTGCTGAAGGAGCCCAAACTGATGGGTGCTATCTCCTTCTTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp ATGAAGAAGGAGATAGCACCCATCAGTTTGGGCTCCTTCAGCACTCCGGGCCTGTTGAAGTCCTTCGACTaGTTCCACTGTTTCTGCGAG +
Preference number: 4 (lower is better)
Translates to: MKKEIAPISLGSFSTPGLLKSFD*FHCFCE
Trigger: CTCGCAGAAACAGTGGAAGCAGTCGAAGGACTTCAA...CAGGCCCGGAGTGCTGAAGGAGCCCAAACTGATGGGTGCTATCTCCTTCTTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp GACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGAGTGCAGGCAGCCAGTaGAGCATCTTGGGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: DINGLQTPQSLFIEVLRRSAGSQ*SILGPF
Trigger: GAAAGGCCCCAAGATGCTGCACTGGCTGCCTGCACT...CCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp ATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAAGTGCAGGCAGCCAGTaGAGCATCTTGGGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: INGLQTPQSLFIEVLRRRSAGSQ*SILGPF
Trigger: GAAAGGCCCCAAGATGCTGCACTGGCTGCCTGCACT...TCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp GACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGGGAGGATGGTGGCGGTaGCCAAGGCTATTCTCAGTC +
Preference number: 4 (lower is better)
Translates to: DINGLQTPQSLFIEVLRRGGWWR*PRLFSV
Trigger: GACTGAGAATAGCCTTGGGCACCGCCACCATCCTCC...CCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp TATTTGAAGGCGGGGATTGCAGAGAGTCGGTACTCTTTCTCCATCTCCTTCTCTGGAGGATGGTGGCGGTaGCCAAGGCTATTCTCAGTC +
Preference number: 4 (lower is better)
Translates to: YLKAGIAESRYSFSISFSGGWWR*PRLFSV
Trigger: GACTGAGAATAGCCTTGGGCACCGCCACCATCCTCC...AGAGAAGGAGATGGAGAAAGAGTACCGACTCTCTGCAATCCCCGCCTTCAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp ATCTCCTTCTCTCTGAAGTACAGTGTCAGTGGGTTGAAGTCCTTCGACTGCTTCGGAGGATGGTGGCGGTaGCCAAGGCTATTCTCAGTC +
Preference number: 4 (lower is better)
Translates to: ISFSLKYSVSGLKSFDCFGGWWR*PRLFSV
Trigger: GACTGAGAATAGCCTTGGGCACCGCCACCATCCTCC...GAAGCAGTCGAAGGACTTCAACCCACTGACACTGTACTTCAGAGAGAAGGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp ACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGGAGGATGGTGGCGGTaGCCAAGGCTATTCTCAGTC +
Preference number: 4 (lower is better)
Translates to: TSMGSRHPRVSLLRFLEGGGWWR*PRLFSV
Trigger: GACTGAGAATAGCCTTGGGCACCGCCACCATCCTCC...GCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp GACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCCCAGCGTGCAGCAGTaGATGGAGTATGGGACACTG +
Preference number: 4 (lower is better)
Translates to: DINGLQTPQSLFIEVLRRPSVQQ*MEYGTL
Trigger: CAGTGTCCCATACTCCATGCACTGCTGCACGCTGGG...CCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310677.8
ENST00000644961.1
CDS-3UTR GCA 90 bp TATTTGAAGGCGGGGATTGCAGAGAGTCGGTACTCTTTCTCCATCTCCTTCTCTCCCAGCGTGCAGCAGTaGATGGAGTATGGGACACTG +
Preference number: 4 (lower is better)
Translates to: YLKAGIAESRYSFSISFSPSVQQ*MEYGTL
Trigger: CAGTGTCCCATACTCCATGCACTGCTGCACGCTGGG...AGAGAAGGAGATGGAGAAAGAGTACCGACTCTCTGCAATCCCCGCCTTCAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
CDS-3UTR GCA 90 bp ACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCCCCAGCGTGCAGCAGTaGATGGAGTATGGGACACTG +
Preference number: 4 (lower is better)
Translates to: TSMGSRHPRVSLLRFLEGPSVQQ*MEYGTL
Trigger: CAGTGTCCCATACTCCATGCACTGCTGCACGCTGGG...GCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310677.8
ENST00000644961.1
CDS-3UTR GCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATTCAGCATCCTGTTGTaGATCCTGTCCAGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQFSILL*ILSRGG
Trigger: GCCACCTCTGGACAGGATGCACAACAGGATGCTGAA...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp CAGCCTAGGGTAGCTGAAGGAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGCCCCAAATGTCATATTaGGGCTTCTGGGCCCCAATA +
Preference number: 4 (lower is better)
Translates to: QPRVAEGGPVRVKSVFRKPQMSY*GFWAPI
Trigger: TATTGGGGCCCAGAAGCCGCAATATGACATTTGGGG...CTTCCTGAACACAGACTTGACACGAACTGGACCTCCTTCAGCTACCCTAGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp GAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGTAGGTGCAGAGCTGCCCTTCCCCAAATGTCATATTaGGGCTTCTGGGCCCCAATA +
Preference number: 4 (lower is better)
Translates to: EVQFVSSLCSGSRCRAALPQMSY*GFWAPI
Trigger: TATTGGGGCCCAGAAGCCGCAATATGACATTTGGGG...AAGGGCAGCTCTGCACCTACTTCCTGAACACAGACTTGACACGAACTGGACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp CAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATCTCAGTCTGTCCAGCAGCTGTaGACACCTGGAGTCCAAGGG +
Preference number: 4 (lower is better)
Translates to: QTPQSLFIEVLRRRVQSQSVQQL*TPGVQG
Trigger: CCCTTGGACTCCAGGTGTGCACAGCTGCTGGACAGA...CTGAGATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR GCA 90 bp TATTTGAAGGCGGGGATTGCAGAGAGTCGGTACTCTTTCTCCATCTCCTTCTCTATCAGGGTGACCCCTTaGTTTCCCCCTTCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: YLKAGIAESRYSFSISFSIRVTP*FPPSWP
Trigger: AGGCCAGGAAGGGGGAAAGCAAGGGGTCACCCTGAT...AGAGAAGGAGATGGAGAAAGAGTACCGACTCTCTGCAATCCCCGCCTTCAAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR GCA 90 bp CAGCCTAGGGTAGCTGAAGGAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGGTGTGTATGTGGGTGTaGAGAGGAACCTTGGCAATC +
Preference number: 4 (lower is better)
Translates to: QPRVAEGGPVRVKSVFRKVCMWV*RGTLAI
Trigger: GATTGCCAAGGTTCCTCTGCACACCCACATACACAC...CTTCCTGAACACAGACTTGACACGAACTGGACCTCCTTCAGCTACCCTAGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
CDS-3UTR CCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATTCCATCAGCGCCTTGTaGTACACTCCTGCCACGTTC +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNSISAL*YTPATF
Trigger: GAACGTGGCAGGAGTGTACCACAAGGCGCTGATGGA...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp GAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGTAGGTGCAGAGCTGCCCTTAAGAGAAGGTGTTCCTaGTGCTTCTTCTCGGTGTCC +
Preference number: 4 (lower is better)
Translates to: EVQFVSSLCSGSRCRAALKRRCS*CFFSVS
Trigger: GGACACCGAGAAGAAGCACCAGGAACACCTTCTCTT...AAGGGCAGCTCTGCACCTACTTCCTGAACACAGACTTGACACGAACTGGACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATACGCAGTTGATGGCATaGTCTGGCAGTGAGAGTGGC +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNTQLMA*SGSESG
Trigger: GCCACTCTCACTGCCAGACCATGCCATCAACTGCGT...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000644961.1
CDS-3UTR CCA 90 bp GGTGCAGGCTTCATAGTATTTGAAGGCGGGGATTGCAGAGAGTCGGTACTCTTTACGCAGTTGATGGCATaGTCTGGCAGTGAGAGTGGC +
Preference number: 4 (lower is better)
Translates to: GAGFIVFEGGDCRESVLFTQLMA*SGSESG
Trigger: GCCACTCTCACTGCCAGACCATGCCATCAACTGCGT...AAAGAGTACCGACTCTCTGCAATCCCCGCCTTCAAATACTATGAAGCCTGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
CDS-3UTR CCA 90 bp AATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGACGCAGTTGATGGCATaGTCTGGCAGTGAGAGTGGC +
Preference number: 4 (lower is better)
Translates to: NGLQTPQSLFIEVLRRRVTQLMA*SGSESG
Trigger: GCCACTCTCACTGCCAGACCATGCCATCAACTGCGT...CACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310677.8
ENST00000644961.1
CDS-3UTR CCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAAAGCTGCTCAATGACCTaGAAGAACTTGGCATCCCCG +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQSCSMT*KNLASP
Trigger: CGGGGATGCCAAGTTCTTCCAGGTCATTGAGCAGCT...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp ATGAAGAAGGAGATAGCACCCATCAGTTTGGGCTCCTTCAGCACTCCGGGCCTGGAAGTACAGTGTCAGTaGGTTGAAGTCCTTCGACTG +
Preference number: 4 (lower is better)
Translates to: MKKEIAPISLGSFSTPGLEVQCQ*VEVLRL
Trigger: CAGTCGAAGGACTTCAACCCACTGACACTGTACTTC...CAGGCCCGGAGTGCTGAAGGAGCCCAAACTGATGGGTGCTATCTCCTTCTTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp ACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGCCAGTGCAGCATCTTaGGGCCTTTCAGGACACACC +
Preference number: 4 (lower is better)
Translates to: TSMGSRHPRVSLLRFLEGASAAS*GLSGHT
Trigger: GGTGTGTCCTGAAAGGCCCCAAGATGCTGCACTGGC...GCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp CAGACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCTATTCTCAGTCCTaGTCGTGTGGCCACCAGGCC +
Preference number: 4 (lower is better)
Translates to: QTSMGSRHPRVSLLRFLEGYSQS*SCGHQA
Trigger: GGCCTGGTGGCCACACGACCAGGACTGAGAATAGCC...TTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp TCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGAGACAAGGAGGATGGTaGCGGTGCCCAAGGCTATTC +
Preference number: 4 (lower is better)
Translates to: SMGSRHPRVSLLRFLEGERQGGW*RCPRLF
Trigger: GAATAGCCTTGGGCACCGCCACCATCCTCCTTGTCT...CTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATAGACAAGGAGGATGGTaGCGGTGCCCAAGGCTATTC +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNRQGGW*RCPRLF
Trigger: GAATAGCCTTGGGCACCGCCACCATCCTCCTTGTCT...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp TCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGCAAAGACAAGGAGGATaGTGGCGGTGCCCAAGGCTA +
Preference number: 4 (lower is better)
Translates to: SMGSRHPRVSLLRFLEGEQRQGG*WRCPRL
Trigger: TAGCCTTGGGCACCGCCACCATCCTCCTTGTCTTTG...CTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATCAAAGACAAGGAGGATaGTGGCGGTGCCCAAGGCTA +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNQRQGG*WRCPRL
Trigger: TAGCCTTGGGCACCGCCACCATCCTCCTTGTCTTTG...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp CTGAAGTACAGTGTCAGTGGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCCAAAGACAAGGAGGATaGTGGCGGTGCCCAAGGCTA +
Preference number: 4 (lower is better)
Translates to: LKYSVSGLKSFDCFHCFCQRQGG*WRCPRL
Trigger: TAGCCTTGGGCACCGCCACCATCCTCCTTGTCTTTG...GCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACTGACACTGTACTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp AATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAAAGACAAGGAGGATaGTGGCGGTGCCCAAGGCTA +
Preference number: 4 (lower is better)
Translates to: NGLQTPQSLFIEVLRRRVQRQGG*WRCPRL
Trigger: TAGCCTTGGGCACCGCCACCATCCTCCTTGTCTTTG...CACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp TCTTCTTCCACAGGAAGTCCAGGCGGCAGTAGTACTCATTCTGGCGAGCCAGGAGACACATTGGGAGCTTaGAAAGGGCAGTCTGATGAT +
Preference number: 4 (lower is better)
Translates to: SSSTGSPGGSSTHSGEPGDTLGA*KGQSDD
Trigger: ATCATCAGACTGCCCTTTCCAAGCTCCCAATGTGTC...TCCTGGCTCGCCAGAATGAGTACTACTGCCGCCTGGACTTCCTGTGGAAGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
CDS-3UTR CCA 90 bp GAAGATGAAGAAGGAGATAGCACCCATCAGTTTGGGCTCCTTCAGCACTCCGGGGCTCCCAGGAGAGGTTaGAAATCATGGAGGACACAT +
Preference number: 4 (lower is better)
Translates to: EDEEGDSTHQFGLLQHSGAPRRG*KSWRTH
Trigger: ATGTGTCCTCCATGATTTCCAACCTCTCCTGGGAGC...CCCGGAGTGCTGAAGGAGCCCAAACTGATGGGTGCTATCTCCTTCTTCATCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAAGCAGTGCATGGAGTATaGGACACTGATGAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQAVHGV*DTDERQ
Trigger: CTGCCTCTCATCAGTGTCCCATACTCCATGCACTGC...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000644961.1
CDS-3UTR CCA 90 bp CAGACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAATTCTGGCCAATGAACTaGGGGGCCACGTGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: QTSMGSRHPRVSLLRFLEFWPMN*GATCAG
Trigger: CCCTGCACACGTGGCCCCCCAGTTCATTGGCCAGAA...TTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATGGCATTTAAGCCTGTaGCTGCCATGTAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQWHLSL*LPCRCC
Trigger: GCAGCACCTACATGGCAGCCACAGGCTTAAATGCCA...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAACATCCTGTCCAGAGGTaGCATTTAAGCCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQHPVQR*HLSLWL
Trigger: CAGCCACAGGCTTAAATGCCACCTCTGGACAGGATG...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp CAGTGTCAGTGGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCGAGTTGAGCATCCTGTCCAGAGGTaGCATTTAAGCCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: QCQWVEVLRLLPLFLRVEHPVQR*HLSLWL
Trigger: CAGCCACAGGCTTAAATGCCACCTCTGGACAGGATG...CTCAACTCGCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACTGACACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp TCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGACCATAGTGCCAAGGTaGCTGCAGCTCCGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: SMGSRHPRVSLLRFLEGETIVPR*LQLRSA
Trigger: TGCTGAACGGAGCTGCAGCCACCTTGGCACTATGGT...CTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp ATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGCTACTACGGGTCCATaGTTCAACCCCACTCGCAGG +
Preference number: 4 (lower is better)
Translates to: INGLQTPQSLFIEVLRRRATTGP*FNPTRR
Trigger: CCTGCGAGTGGGGTTGAACCATGGACCCGTAGTAGC...TCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp TATTTGAAGGCGGGGATTGCAGAGAGTCGGTACTCTTTCTCCATCTCCTTCTCTGCTACTACGGGTCCATaGTTCAACCCCACTCGCAGG +
Preference number: 4 (lower is better)
Translates to: YLKAGIAESRYSFSISFSATTGP*FNPTRR
Trigger: CCTGCGAGTGGGGTTGAACCATGGACCCGTAGTAGC...AGAGAAGGAGATGGAGAAAGAGTACCGACTCTCTGCAATCCCCGCCTTCAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp AAATCATGGAGGACACATTGGGAGCTTGGAAAGGGCAGTCTGATGATGTTGGGAGCTACTACGGGTCCATaGTTCAACCCCACTCGCAGG +
Preference number: 4 (lower is better)
Translates to: KSWRTHWELGKGSLMMLGATTGP*FNPTRR
Trigger: CCTGCGAGTGGGGTTGAACCATGGACCCGTAGTAGC...TCCCAACATCATCAGACTGCCCTTTCCAAGCTCCCAATGTGTCCTCCATGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp GAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGTAGGTGCAGAGCTGCCCTTTCATATTGCGGCTTCTaGGCCCCAATAACTCCAGCT +
Preference number: 4 (lower is better)
Translates to: EVQFVSSLCSGSRCRAALSYCGF*APITPA
Trigger: AGCTGGAGTTATTGGGGCCCAGAAGCCGCAATATGA...AAGGGCAGCTCTGCACCTACTTCCTGAACACAGACTTGACACGAACTGGACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp GAGCAGCAGCAGCTTCAGCTCGAAGCTCATGTGCAGAAAGAGGGAGCAGGAGAGCTTAGAAGCTTCCAATaGGCATTCAACCCTGGAGAT +
Preference number: 4 (lower is better)
Translates to: EQQQLQLEAHVQKEGAGELRSFQ*AFNPGD
Trigger: ATCTCCAGGGTTGAATGCCCATTGGAAGCTTCTAAG...CTCTCCTGCTCCCTCTTTCTGCACATGAGCTTCGAGCTGAAGCTGCTGCTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR CCA 90 bp CTTCAGCACTCCGGGCCTGAAGGGGCCATGGATCAGGGTGACCCCTTGCTTTCCCTAGGGATAGAGAATTaGCAGCAGACTTTTTCTAAA +
Preference number: 4 (lower is better)
Translates to: LQHSGPEGAMDQGDPLLSLGIEN*QQTFSK
Trigger: TTTAGAAAAAGTCTGCTGCCAATTCTCTATCCCTAG...GGAAAGCAAGGGGTCACCCTGATCCATGGCCCCTTCAGGCCCGGAGTGCTGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR CCA 90 bp CTTCAGCACTCCGGGCCTGAAGGGGCCATGGATCAGGGTGACCCCTTGCTTTCCAGGTGTAAGTATACTTaGAGAGAGACTATCCTTGAA +
Preference number: 4 (lower is better)
Translates to: LQHSGPEGAMDQGDPLLSRCKYT*RETILE
Trigger: TTCAAGGATAGTCTCTCTCCAAGTATACTTACACCT...GGAAAGCAAGGGGTCACCCTGATCCATGGCCCCTTCAGGCCCGGAGTGCTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR CCA 90 bp CAGCCTAGGGTAGCTGAAGGAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGTGTGCAGAGGAACCTTaGCAATCTGGTCGAACTTGC +
Preference number: 4 (lower is better)
Translates to: QPRVAEGGPVRVKSVFRKCAEEP*QSGRTC
Trigger: GCAAGTTCGACCAGATTGCCAAGGTTCCTCTGCACA...CTTCCTGAACACAGACTTGACACGAACTGGACCTCCTTCAGCTACCCTAGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
CDS-3UTR CCA 90 bp CAGTGTCAGTGGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCGAGTTGAGCTGGGAGTGTGTATGTaGGTGTGCAGAGGAACCTTG +
Preference number: 4 (lower is better)
Translates to: QCQWVEVLRLLPLFLRVELGVCM*VCRGTL
Trigger: CAAGGTTCCTCTGCACACCCACATACACACTCCCAG...CTCAACTCGCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACTGACACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
CDS-3UTR TCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATAGTCCCCCAGGATCTTaGTCCGCATGCATTCATGCT +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNSPPGS*SACIHA
Trigger: AGCATGAATGCATGCGGATCAAGATCCTGGGGGACT...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000644961.1
CDS-3UTR TCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAACCATCTCCTTCTCTCTaGAGTACAGTGTCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQPSPSL*STVSVG
Trigger: ACCCACTGACACTGTACTTCAGAGAGAAGGAGATGG...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp AGTGGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCGAGTTGAGCTGCTCACCATCTCCTTCTCTCTaGAGTACAGTGTCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: SGLKSFDCFHCFCELSCSPSPSL*STVSVG
Trigger: ACCCACTGACACTGTACTTCAGAGAGAAGGAGATGG...TGAGCAGCTCAACTCGCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR TCA 90 bp GAAGATGAAGAAGGAGATAGCACCCATCAGTTTGGGCTCCTTCAGCACTCCGGGAGGCTTCATAGTATTTaGAGGCGGGGATTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: EDEEGDSTHQFGLLQHSGRLHSI*RRGLQR
Trigger: TCTCTGCAATCCCCGCCTTCAAATACTATGAAGCCT...CCCGGAGTGCTGAAGGAGCCCAAACTGATGGGTGCTATCTCCTTCTTCATCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR TCA 90 bp GAGGTCCAGTTCGTGTCAAGTCTGTGTTCAGGAAGTAGGTGCAGAGCTGCCCTTCCTCATCAGGTCCTCTaGGAAGCAGACAAAAAGGAT +
Preference number: 4 (lower is better)
Translates to: EVQFVSSLCSGSRCRAALPHQVL*EADKKD
Trigger: ATCCTTTTTGTCTGCTTCTCAGAGGACCTGATGAGG...AAGGGCAGCTCTGCACCTACTTCCTGAACACAGACTTGACACGAACTGGACCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR TCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATCTTGAAGTCTGGGACTaGGGCGAAGAGGACACAAAC +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNLEVWD*GEEDTN
Trigger: GTTTGTGTCCTCTTCGCCTCAGTCCCAGACTTCAAG...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATCAGAGTAGAACTCCTTaGAGTCTGGGACTGAGGCGA +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNQSRTP*SLGLRR
Trigger: TCGCCTCAGTCCCAGACTTCAAGGAGTTCTACTCTG...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp TCTTCTTCCACAGGAAGTCCAGGCGGCAGTAGTACTCATTCTGGCGAGCCAGGACTAGGCCCTCATGATTaGTGTTGGATTCAGAGTAGA +
Preference number: 4 (lower is better)
Translates to: SSSTGSPGGSSTHSGEPGLGPHD*CWIQSR
Trigger: TCTACTCTGAATCCAACATCAATCATGAGGGCCTAG...TCCTGGCTCGCCAGAATGAGTACTACTGCCGCCTGGACTTCCTGTGGAAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
CDS-3UTR GCA 90 bp CAGACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGCACAGGAACAGCACTaGGTTTGCTGCCAACTGCGG +
Preference number: 4 (lower is better)
Translates to: QTSMGSRHPRVSLLRFLEAQEQH*VCCQLR
Trigger: CCGCAGTTGGCAGCAAACGCAGTGCTGTTCCTGTGC...TTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp ATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGACTTGTGGTACACTCCTaGCACGTTCCCGCACAGGAA +
Preference number: 4 (lower is better)
Translates to: INGLQTPQSLFIEVLRRRLVVHS*HVPAQE
Trigger: TTCCTGTGCGGGAACGTGGCAGGAGTGTACCACAAG...TCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp ATCTCCTTCTCTCTGAAGTACAGTGTCAGTGGGTTGAAGTCCTTCGACTGCTTCCTTGTGGTACACTCCTaGCACGTTCCCGCACAGGAA +
Preference number: 4 (lower is better)
Translates to: ISFSLKYSVSGLKSFDCFLVVHS*HVPAQE
Trigger: TTCCTGTGCGGGAACGTGGCAGGAGTGTACCACAAG...GAAGCAGTCGAAGGACTTCAACCCACTGACACTGTACTTCAGAGAGAAGGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp CAGACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAACCGTGCCATGATCTCTaGCTTCATCTCTCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: QTSMGSRHPRVSLLRFLEPCHDL*LHLSGQ
Trigger: CTGGCCCGAGAGATGAAGGCAGAGATCATGGCACGG...TTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp ATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGATCCTGCCTGCAGCCGTaGCATGATCTCTGCCTTCAT +
Preference number: 4 (lower is better)
Translates to: INGLQTPQSLFIEVLRRRSCLQP*HDLCLH
Trigger: ATGAAGGCAGAGATCATGGCACGGCTGCAGGCAGGA...TCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp GACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGTCGTACTGCCACTTCTaGAGCCCGATGACTCCACAC +
Preference number: 4 (lower is better)
Translates to: DINGLQTPQSLFIEVLRRSYCHF*SPMTPH
Trigger: GTGTGGAGTCATCGGGCTGCAGAAGTGGCAGTACGA...CCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp ATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGATCGTACTGCCACTTCTaGAGCCCGATGACTCCACAC +
Preference number: 4 (lower is better)
Translates to: INGLQTPQSLFIEVLRRRSYCHF*SPMTPH
Trigger: GTGTGGAGTCATCGGGCTGCAGAAGTGGCAGTACGA...TCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp TGGGAAGAAGAACAGGCTGGTAATGGCCATGGCAAAGACAAGGAGGATGGTGGCTTCTGCGAGTTGAGCTaGTCAATGACCTGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: WEEEQAGNGHGKDKEDGGFCELS*SMTWKN
Trigger: GTTCTTCCAGGTCATTGAGCAGCTCAACTCGCAGAA...GCCACCATCCTCCTTGTCTTTGCCATGGCCATTACCAGCCTGTTCTTCTTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp TCCGTTCAGCATCCTGTTGTGCATCCTGTCCAGAGGTGGCATTTAAGCCTGTGGTGCTTCCACTGTTTCTaGGAGTTGAGCTGCTCAATG +
Preference number: 4 (lower is better)
Translates to: SVQHPVVHPVQRWHLSLWCFHCF*ELSCSM
Trigger: CATTGAGCAGCTCAACTCGCAGAAACAGTGGAAGCA...CCACAGGCTTAAATGCCACCTCTGGACAGGATGCACAACAGGATGCTGAACGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp TGGGAAGAAGAACAGGCTGGTAATGGCCATGGCAAAGACAAGGAGGATGGTGGCTGCTTCCACTGTTTCTaGGAGTTGAGCTGCTCAATG +
Preference number: 4 (lower is better)
Translates to: WEEEQAGNGHGKDKEDGGCFHCF*ELSCSM
Trigger: CATTGAGCAGCTCAACTCGCAGAAACAGTGGAAGCA...GCCACCATCCTCCTTGTCTTTGCCATGGCCATTACCAGCCTGTTCTTCTTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp TCCGTTCAGCATCCTGTTGTGCATCCTGTCCAGAGGTGGCATTTAAGCCTGTGGTTGAAGTCCTTCGACTaGTTCCACTGTTTCTGCGAG +
Preference number: 4 (lower is better)
Translates to: SVQHPVVHPVQRWHLSLWLKSFD*FHCFCE
Trigger: CTCGCAGAAACAGTGGAAGCAGTCGAAGGACTTCAA...CCACAGGCTTAAATGCCACCTCTGGACAGGATGCACAACAGGATGCTGAACGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp GACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGAGAGGAAGCCCAGCGTaGAGCAGTGCATGGAGTATG +
Preference number: 4 (lower is better)
Translates to: DINGLQTPQSLFIEVLRRRGSPA*SSAWSM
Trigger: CATACTCCATGCACTGCTGCACGCTGGGCTTCCTCT...CCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310677.8
ENST00000644961.1
CDS-3UTR GCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAACCCCAAATGTCATATTaGGGCTTCTGGGCCCCAATA +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQPQMSY*GFWAPI
Trigger: TATTGGGGCCCAGAAGCCGCAATATGACATTTGGGG...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATGTTCAGGAAGTAGGTaGAGAGCTGCCCTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQCSGSR*RAALCL
Trigger: AAGGCAAAGGGCAGCTCTGCACCTACTTCCTGAACA...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp AGTGGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCGAGTTGAGCTGCTCATGTTCAGGAAGTAGGTaGAGAGCTGCCCTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: SGLKSFDCFHCFCELSCSCSGSR*RAALCL
Trigger: AAGGCAAAGGGCAGCTCTGCACCTACTTCCTGAACA...TGAGCAGCTCAACTCGCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp CAGTGTCAGTGGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCGAGTTGAGTGTTCAGGAAGTAGGTaGAGAGCTGCCCTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: QCQWVEVLRLLPLFLRVECSGSR*RAALCL
Trigger: AAGGCAAAGGGCAGCTCTGCACCTACTTCCTGAACA...CTCAACTCGCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACTGACACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp ATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCTGTTCAGGAAGTAGGTaGAGAGCTGCCCTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: MGSRHPRVSLLRFLEGECCSGSR*RAALCL
Trigger: AAGGCAAAGGGCAGCTCTGCACCTACTTCCTGAACA...GCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp ACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCTCCATCAGCGCCTTGTaGTACACTCCTGCCACGTTC +
Preference number: 4 (lower is better)
Translates to: TSMGSRHPRVSLLRFLEGSISAL*YTPATF
Trigger: GAACGTGGCAGGAGTGTACCACAAGGCGCTGATGGA...GCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAAAAGAGAAGGTGTTCCTaGTGCTTCTTCTCGGTGTCC +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQKRRCS*CFFSVS
Trigger: GGACACCGAGAAGAAGCACCAGGAACACCTTCTCTT...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp TGTCTCCTCAGTCACTTGGATTTTGCCAAGGACTCCTGTACTCTCCATGCGGCTAAGAGAAGGTGTTCCTaGTGCTTCTTCTCGGTGTCC +
Preference number: 4 (lower is better)
Translates to: CLLSHLDFAKDSCTLHAAKRRCS*CFFSVS
Trigger: GGACACCGAGAAGAAGCACCAGGAACACCTTCTCTT...AGCCGCATGGAGAGTACAGGAGTCCTTGGCAAAATCCAAGTGACTGAGGAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp TATTTGAAGGCGGGGATTGCAGAGAGTCGGTACTCTTTCTCCATCTCCTTCTCTCTCCTCCTCTGCCCGTaGATCGATGACCAGATAGGT +
Preference number: 4 (lower is better)
Translates to: YLKAGIAESRYSFSISFSLLLCP*IDDQIG
Trigger: ACCTATCTGGTCATCGATCCACGGGCAGAGGAGGAG...AGAGAAGGAGATGGAGAAAGAGTACCGACTCTCTGCAATCCCCGCCTTCAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATAGCTGCTCAATGACCTaGAAGAACTTGGCATCCCCG +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNSCSMT*KNLASP
Trigger: CGGGGATGCCAAGTTCTTCCAGGTCATTGAGCAGCT...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp AGCAGTGATGGACGCATCTTGAGGCCCTCAAGCGAGGACAGCAAGCCTCCTGCATTTGTCACTAGCATCTaGATGATGAAGTTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: SSDGRILRPSSEDSKPPAFVTSI*MMKLER
Trigger: TCTCTCCAACTTCATCATCCAGATGCTAGTGACAAA...TGCAGGAGGCTTGCTGTCCTCGCTTGAGGGCCTCAAGATGCGTCCATCACTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp CAGACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGCCAGTGCAGCATCTTaGGGCCTTTCAGGACACACC +
Preference number: 4 (lower is better)
Translates to: QTSMGSRHPRVSLLRFLEASAAS*GLSGHT
Trigger: GGTGTGTCCTGAAAGGCCCCAAGATGCTGCACTGGC...TTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp ATCTCCTTCTCTCTGAAGTACAGTGTCAGTGGGTTGAAGTCCTTCGACTGCTTCAGACAAGGAGGATGGTaGCGGTGCCCAAGGCTATTC +
Preference number: 4 (lower is better)
Translates to: ISFSLKYSVSGLKSFDCFRQGGW*RCPRLF
Trigger: GAATAGCCTTGGGCACCGCCACCATCCTCCTTGTCT...GAAGCAGTCGAAGGACTTCAACCCACTGACACTGTACTTCAGAGAGAAGGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp AAATCATGGAGGACACATTGGGAGCTTGGAAAGGGCAGTCTGATGATGTTGGGAAGACAAGGAGGATGGTaGCGGTGCCCAAGGCTATTC +
Preference number: 4 (lower is better)
Translates to: KSWRTHWELGKGSLMMLGRQGGW*RCPRLF
Trigger: GAATAGCCTTGGGCACCGCCACCATCCTCCTTGTCT...TCCCAACATCATCAGACTGCCCTTTCCAAGCTCCCAATGTGTCCTCCATGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp TATTTGAAGGCGGGGATTGCAGAGAGTCGGTACTCTTTCTCCATCTCCTTCTCTCAAAGACAAGGAGGATaGTGGCGGTGCCCAAGGCTA +
Preference number: 4 (lower is better)
Translates to: YLKAGIAESRYSFSISFSQRQGG*WRCPRL
Trigger: TAGCCTTGGGCACCGCCACCATCCTCCTTGTCTTTG...AGAGAAGGAGATGGAGAAAGAGTACCGACTCTCTGCAATCCCCGCCTTCAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAAGCTCCCAGGAGAGGTTaGAAATCATGGAGGACACAT +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQAPRRG*KSWRTH
Trigger: ATGTGTCCTCCATGATTTCCAACCTCTCCTGGGAGC...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp AGTGGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCGAGTTGAGCTGCTCAGCTCCCAGGAGAGGTTaGAAATCATGGAGGACACAT +
Preference number: 4 (lower is better)
Translates to: SGLKSFDCFHCFCELSCSAPRRG*KSWRTH
Trigger: ATGTGTCCTCCATGATTTCCAACCTCTCCTGGGAGC...TGAGCAGCTCAACTCGCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATGCAGTGCATGGAGTATaGGACACTGATGAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNAVHGV*DTDERQ
Trigger: CTGCCTCTCATCAGTGTCCCATACTCCATGCACTGC...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000644961.1
CDS-3UTR CCA 90 bp CTGAAGTACAGTGTCAGTGGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCGCAGTGCATGGAGTATaGGACACTGATGAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LKYSVSGLKSFDCFHCFCAVHGV*DTDERQ
Trigger: CTGCCTCTCATCAGTGTCCCATACTCCATGCACTGC...GCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACTGACACTGTACTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
CDS-3UTR CCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATTGGCATTTAAGCCTGTaGCTGCCATGTAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNWHLSL*LPCRCC
Trigger: GCAGCACCTACATGGCAGCCACAGGCTTAAATGCCA...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp CTGAAGTACAGTGTCAGTGGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCTGGCATTTAAGCCTGTaGCTGCCATGTAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LKYSVSGLKSFDCFHCFCWHLSL*LPCRCC
Trigger: GCAGCACCTACATGGCAGCCACAGGCTTAAATGCCA...GCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACTGACACTGTACTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp ATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAACCATAGTGCCAAGGTaGCTGCAGCTCCGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: INGLQTPQSLFIEVLRRRTIVPR*LQLRSA
Trigger: TGCTGAACGGAGCTGCAGCCACCTTGGCACTATGGT...TCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp TATTTGAAGGCGGGGATTGCAGAGAGTCGGTACTCTTTCTCCATCTCCTTCTCTACCATAGTGCCAAGGTaGCTGCAGCTCCGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: YLKAGIAESRYSFSISFSTIVPR*LQLRSA
Trigger: TGCTGAACGGAGCTGCAGCCACCTTGGCACTATGGT...AGAGAAGGAGATGGAGAAAGAGTACCGACTCTCTGCAATCCCCGCCTTCAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATCATATTGCGGCTTCTaGGCCCCAATAACTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQSYCGF*APITPA
Trigger: AGCTGGAGTTATTGGGGCCCAGAAGCCGCAATATGA...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp GAAGATGAAGAAGGAGATAGCACCCATCAGTTTGGGCTCCTTCAGCACTCCGGGGTCTCCTCAGTCACTTaGATTTTGCCAAGGACTCCT +
Preference number: 4 (lower is better)
Translates to: EDEEGDSTHQFGLLQHSGVSSVT*ILPRTP
Trigger: AGGAGTCCTTGGCAAAATCCAAGTGACTGAGGAGAC...CCCGGAGTGCTGAAGGAGCCCAAACTGATGGGTGCTATCTCCTTCTTCATCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp CAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATCTCAGTCCCACTTTGCCCTGTaGGTGATTCAGGTCGGTGAG +
Preference number: 4 (lower is better)
Translates to: QTPQSLFIEVLRRRVQSQSHFAL*VIQVGE
Trigger: CTCACCGACCTGAATCACCCACAGGGCAAAGTGGGA...CTGAGATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR CCA 90 bp CAGTGTCAGTGGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCGAGTTGAGATCAAGTCACAGATATaGGGGCCACTCATAGGTGGG +
Preference number: 4 (lower is better)
Translates to: QCQWVEVLRLLPLFLRVEIKSQI*GPLIGG
Trigger: CCCACCTATGAGTGGCCCCCATATCTGTGACTTGAT...CTCAACTCGCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACTGACACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR CCA 90 bp CAGTGTCAGTGGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCGAGTTGAGTGTGCAGAGGAACCTTaGCAATCTGGTCGAACTTGC +
Preference number: 4 (lower is better)
Translates to: QCQWVEVLRLLPLFLRVECAEEP*QSGRTC
Trigger: GCAAGTTCGACCAGATTGCCAAGGTTCCTCTGCACA...CTCAACTCGCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACTGACACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
CDS-3UTR TCA 90 bp GACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGAGTCCCCCAGGATCTTaGTCCGCATGCATTCATGCT +
Preference number: 4 (lower is better)
Translates to: DINGLQTPQSLFIEVLRRSPPGS*SACIHA
Trigger: AGCATGAATGCATGCGGATCAAGATCCTGGGGGACT...CCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310677.8
ENST00000644961.1
CDS-3UTR TCA 90 bp TATTTGAAGGCGGGGATTGCAGAGAGTCGGTACTCTTTCTCCATCTCCTTCTCTAGTCCCCCAGGATCTTaGTCCGCATGCATTCATGCT +
Preference number: 4 (lower is better)
Translates to: YLKAGIAESRYSFSISFSSPPGS*SACIHA
Trigger: AGCATGAATGCATGCGGATCAAGATCCTGGGGGACT...AGAGAAGGAGATGGAGAAAGAGTACCGACTCTCTGCAATCCCCGCCTTCAAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
CDS-3UTR TCA 90 bp AATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCCATCTCCTTCTCTCTaGAGTACAGTGTCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: NGLQTPQSLFIEVLRRRVPSPSL*STVSVG
Trigger: ACCCACTGACACTGTACTTCAGAGAGAAGGAGATGG...CACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp ATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAGGCTTCATAGTATTTaGAGGCGGGGATTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: MGSRHPRVSLLRFLEGECRLHSI*RRGLQR
Trigger: TCTCTGCAATCCCCGCCTTCAAATACTATGAAGCCT...GCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAAAGGCTTCATAGTATTTaGAGGCGGGGATTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQRLHSI*RRGLQR
Trigger: TCTCTGCAATCCCCGCCTTCAAATACTATGAAGCCT...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp ATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCCCTCATCAGGTCCTCTaGGAAGCAGACAAAAAGGAT +
Preference number: 4 (lower is better)
Translates to: MGSRHPRVSLLRFLEGECPHQVL*EADKKD
Trigger: ATCCTTTTTGTCTGCTTCTCAGAGGACCTGATGAGG...GCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAACCTCATCAGGTCCTCTaGGAAGCAGACAAAAAGGAT +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQPHQVL*EADKKD
Trigger: ATCCTTTTTGTCTGCTTCTCAGAGGACCTGATGAGG...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp TATTTGAAGGCGGGGATTGCAGAGAGTCGGTACTCTTTCTCCATCTCCTTCTCTCTTGAAGTCTGGGACTaGGGCGAAGAGGACACAAAC +
Preference number: 4 (lower is better)
Translates to: YLKAGIAESRYSFSISFSLEVWD*GEEDTN
Trigger: GTTTGTGTCCTCTTCGCCTCAGTCCCAGACTTCAAG...AGAGAAGGAGATGGAGAAAGAGTACCGACTCTCTGCAATCCCCGCCTTCAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR TCA 90 bp ACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCCAGAGTAGAACTCCTTaGAGTCTGGGACTGAGGCGA +
Preference number: 4 (lower is better)
Translates to: TSMGSRHPRVSLLRFLEGQSRTP*SLGLRR
Trigger: TCGCCTCAGTCCCAGACTTCAAGGAGTTCTACTCTG...GCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp ATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGACAGAGTAGAACTCCTTaGAGTCTGGGACTGAGGCGA +
Preference number: 4 (lower is better)
Translates to: INGLQTPQSLFIEVLRRRQSRTP*SLGLRR
Trigger: TCGCCTCAGTCCCAGACTTCAAGGAGTTCTACTCTG...TCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp ATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCCACTCTAGGCCCTCATaGTTGATGTTGGATTCAGAG +
Preference number: 4 (lower is better)
Translates to: MGSRHPRVSLLRFLEGECHSRPS*LMLDSE
Trigger: CTCTGAATCCAACATCAATCATGAGGGCCTAGAGTG...GCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAACACTCTAGGCCCTCATaGTTGATGTTGGATTCAGAG +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQHSRPS*LMLDSE
Trigger: CTCTGAATCCAACATCAATCATGAGGGCCTAGAGTG...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp ATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAAGAAGGTGTTCCTGGTaGTTCTTCTCGGTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: INGLQTPQSLFIEVLRRRRRCSW*FFSVSS
Trigger: GCTGGACACCGAGAAGAAGCACCAGGAACACCTTCT...TCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATTCTGCGAGTTGAGCTaGTCAATGACCTGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQFCELS*SMTWKN
Trigger: GTTCTTCCAGGTCATTGAGCAGCTCAACTCGCAGAA...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATGCTTCCACTGTTTCTaGGAGTTGAGCTGCTCAATG +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQCFHCF*ELSCSM
Trigger: CATTGAGCAGCTCAACTCGCAGAAACAGTGGAAGCA...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp ATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCTTGAAGTCCTTCGACTaGTTCCACTGTTTCTGCGAG +
Preference number: 4 (lower is better)
Translates to: MGSRHPRVSLLRFLEGECLKSFD*FHCFCE
Trigger: CTCGCAGAAACAGTGGAAGCAGTCGAAGGACTTCAA...GCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATTGAAGTCCTTCGACTaGTTCCACTGTTTCTGCGAG +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQLKSFD*FHCFCE
Trigger: CTCGCAGAAACAGTGGAAGCAGTCGAAGGACTTCAA...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATTTGAAGGCGGGGATTaGAGAGAGTCGGTACTCTTT +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQFEGGD*RESVLF
Trigger: AAAGAGTACCGACTCTCTGCAATCCCCGCCTTCAAA...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp CAGTGTCAGTGGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCGAGTTGAGTTTGAAGGCGGGGATTaGAGAGAGTCGGTACTCTTT +
Preference number: 4 (lower is better)
Translates to: QCQWVEVLRLLPLFLRVEFEGGD*RESVLF
Trigger: AAAGAGTACCGACTCTCTGCAATCCCCGCCTTCAAA...CTCAACTCGCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACTGACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp ATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGATTCAGCATCCTGTTGTaGATCCTGTCCAGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: INGLQTPQSLFIEVLRRRFSILL*ILSRGG
Trigger: GCCACCTCTGGACAGGATGCACAACAGGATGCTGAA...TCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp GACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGTTCAGCATCCTGTTGTaGATCCTGTCCAGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: DINGLQTPQSLFIEVLRRFSILL*ILSRGG
Trigger: GCCACCTCTGGACAGGATGCACAACAGGATGCTGAA...CCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp ATCTCCTTCTCTCTGAAGTACAGTGTCAGTGGGTTGAAGTCCTTCGACTGCTTCTTCAGCATCCTGTTGTaGATCCTGTCCAGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: ISFSLKYSVSGLKSFDCFFSILL*ILSRGG
Trigger: GCCACCTCTGGACAGGATGCACAACAGGATGCTGAA...GAAGCAGTCGAAGGACTTCAACCCACTGACACTGTACTTCAGAGAGAAGGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR GCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATCCCCAAATGTCATATTaGGGCTTCTGGGCCCCAATA +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNPQMSY*GFWAPI
Trigger: TATTGGGGCCCAGAAGCCGCAATATGACATTTGGGG...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATTGTTCAGGAAGTAGGTaGAGAGCTGCCCTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNCSGSR*RAALCL
Trigger: AAGGCAAAGGGCAGCTCTGCACCTACTTCCTGAACA...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp TGTCTCCTCAGTCACTTGGATTTTGCCAAGGACTCCTGTACTCTCCATGCGGCTATCCGCATGCATTCATaGTCCTGGGAGTGTGTATGT +
Preference number: 4 (lower is better)
Translates to: CLLSHLDFAKDSCTLHAAIRMHS*SWECVC
Trigger: ACATACACACTCCCAGGAGCATGAATGCATGCGGAT...AGCCGCATGGAGAGTACAGGAGTCCTTGGCAAAATCCAAGTGACTGAGGAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
CDS-3UTR GCA 90 bp AGTGGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCGAGTTGAGCTGCTCAATCCGCATGCATTCATaGTCCTGGGAGTGTGTATGT +
Preference number: 4 (lower is better)
Translates to: SGLKSFDCFHCFCELSCSIRMHS*SWECVC
Trigger: ACATACACACTCCCAGGAGCATGAATGCATGCGGAT...TGAGCAGCTCAACTCGCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554781.5
ENST00000643432.1
CDS-3UTR CCA 90 bp AATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGAAGAGAAGGTGTTCCTaGTGCTTCTTCTCGGTGTCC +
Preference number: 4 (lower is better)
Translates to: NGLQTPQSLFIEVLRRRVKRRCS*CFFSVS
Trigger: GGACACCGAGAAGAAGCACCAGGAACACCTTCTCTT...CACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp ATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCTGCATTCATGCTCCTTaGCAATCTGGTCGAACTTGC +
Preference number: 4 (lower is better)
Translates to: MGSRHPRVSLLRFLEGECCIHAP*QSGRTC
Trigger: GCAAGTTCGACCAGATTGCCAAGGAGCATGAATGCA...GCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310677.8
ENST00000644961.1
CDS-3UTR CCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATGCATTCATGCTCCTTaGCAATCTGGTCGAACTTGC +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQCIHAP*QSGRTC
Trigger: GCAAGTTCGACCAGATTGCCAAGGAGCATGAATGCA...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000644961.1
CDS-3UTR CCA 90 bp CAGACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAACTCCTCCTCTGCCCGTaGATCGATGACCAGATAGGT +
Preference number: 4 (lower is better)
Translates to: QTSMGSRHPRVSLLRFLELLLCP*IDDQIG
Trigger: ACCTATCTGGTCATCGATCCACGGGCAGAGGAGGAG...TTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAAGAAGTACAGTGTCAGTaGGTTGAAGTCCTTCGACTG +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQEVQCQ*VEVLRL
Trigger: CAGTCGAAGGACTTCAACCCACTGACACTGTACTTC...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp AGTGGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCGAGTTGAGCTGCTCAGACACATTGGGAGCTTaGAAAGGGCAGTCTGATGAT +
Preference number: 4 (lower is better)
Translates to: SGLKSFDCFHCFCELSCSDTLGA*KGQSDD
Trigger: ATCATCAGACTGCCCTTTCCAAGCTCCCAATGTGTC...TGAGCAGCTCAACTCGCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp ATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGCAGTGCATGGAGTATaGGACACTGATGAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: INGLQTPQSLFIEVLRRRAVHGV*DTDERQ
Trigger: CTGCCTCTCATCAGTGTCCCATACTCCATGCACTGC...TCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310677.8
ENST00000644961.1
CDS-3UTR CCA 90 bp ACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCCATCCTGTCCAGAGGTaGCATTTAAGCCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: TSMGSRHPRVSLLRFLEGHPVQR*HLSLWL
Trigger: CAGCCACAGGCTTAAATGCCACCTCTGGACAGGATG...GCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp TATTTGAAGGCGGGGATTGCAGAGAGTCGGTACTCTTTCTCCATCTCCTTCTCTCATCCTGTCCAGAGGTaGCATTTAAGCCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: YLKAGIAESRYSFSISFSHPVQR*HLSLWL
Trigger: CAGCCACAGGCTTAAATGCCACCTCTGGACAGGATG...AGAGAAGGAGATGGAGAAAGAGTACCGACTCTCTGCAATCCCCGCCTTCAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp GACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCATCCTGTCCAGAGGTaGCATTTAAGCCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: DINGLQTPQSLFIEVLRRHPVQR*HLSLWL
Trigger: CAGCCACAGGCTTAAATGCCACCTCTGGACAGGATG...CCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATTCATATTGCGGCTTCTaGGCCCCAATAACTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNSYCGF*APITPA
Trigger: AGCTGGAGTTATTGGGGCCCAGAAGCCGCAATATGA...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAAGTCTCCTCAGTCACTTaGATTTTGCCAAGGACTCCT +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQVSSVT*ILPRTP
Trigger: AGGAGTCCTTGGCAAAATCCAAGTGACTGAGGAGAC...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR CCA 90 bp CAGTGTCAGTGGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCGAGTTGAGGTCTCCTCAGTCACTTaGATTTTGCCAAGGACTCCT +
Preference number: 4 (lower is better)
Translates to: QCQWVEVLRLLPLFLRVEVSSVT*ILPRTP
Trigger: AGGAGTCCTTGGCAAAATCCAAGTGACTGAGGAGAC...CTCAACTCGCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACTGACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR CCA 90 bp AGTGGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCGAGTTGAGCTGCTCAGTCTCCTCAGTCACTTaGATTTTGCCAAGGACTCCT +
Preference number: 4 (lower is better)
Translates to: SGLKSFDCFHCFCELSCSVSSVT*ILPRTP
Trigger: AGGAGTCCTTGGCAAAATCCAAGTGACTGAGGAGAC...TGAGCAGCTCAACTCGCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR TCA 90 bp ACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCCCATCTCCTTCTCTCTaGAGTACAGTGTCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: TSMGSRHPRVSLLRFLEGPSPSL*STVSVG
Trigger: ACCCACTGACACTGTACTTCAGAGAGAAGGAGATGG...GCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp AATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGAGGCTTCATAGTATTTaGAGGCGGGGATTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: NGLQTPQSLFIEVLRRRVRLHSI*RRGLQR
Trigger: TCTCTGCAATCCCCGCCTTCAAATACTATGAAGCCT...CACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp GGTGCAGGCTTCATAGTATTTGAAGGCGGGGATTGCAGAGAGTCGGTACTCTTTCCTCATCAGGTCCTCTaGGAAGCAGACAAAAAGGAT +
Preference number: 4 (lower is better)
Translates to: GAGFIVFEGGDCRESVLFPHQVL*EADKKD
Trigger: ATCCTTTTTGTCTGCTTCTCAGAGGACCTGATGAGG...AAAGAGTACCGACTCTCTGCAATCCCCGCCTTCAAATACTATGAAGCCTGCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR TCA 90 bp CAGACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAACTTGAAGTCTGGGACTaGGGCGAAGAGGACACAAAC +
Preference number: 4 (lower is better)
Translates to: QTSMGSRHPRVSLLRFLELEVWD*GEEDTN
Trigger: GTTTGTGTCCTCTTCGCCTCAGTCCCAGACTTCAAG...TTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp CAGACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAACAGAGTAGAACTCCTTaGAGTCTGGGACTGAGGCGA +
Preference number: 4 (lower is better)
Translates to: QTSMGSRHPRVSLLRFLEQSRTP*SLGLRR
Trigger: TCGCCTCAGTCCCAGACTTCAAGGAGTTCTACTCTG...TTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAACTAGGCCCTCATGATTaGTGTTGGATTCAGAGTAGA +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQLGPHD*CWIQSR
Trigger: TCTACTCTGAATCCAACATCAATCATGAGGGCCTAG...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp TGTCTCCTCAGTCACTTGGATTTTGCCAAGGACTCCTGTACTCTCCATGCGGCTCTAGGCCCTCATGATTaGTGTTGGATTCAGAGTAGA +
Preference number: 4 (lower is better)
Translates to: CLLSHLDFAKDSCTLHAALGPHD*CWIQSR
Trigger: TCTACTCTGAATCCAACATCAATCATGAGGGCCTAG...AGCCGCATGGAGAGTACAGGAGTCCTTGGCAAAATCCAAGTGACTGAGGAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR TCA 90 bp TGGAGGACACATTGGGAGCTTGGAAAGGGCAGTCTGATGATGTTGGGAAGAAGACACTCTAGGCCCTCATaGTTGATGTTGGATTCAGAG +
Preference number: 4 (lower is better)
Translates to: WRTHWELGKGSLMMLGRRHSRPS*LMLDSE
Trigger: CTCTGAATCCAACATCAATCATGAGGGCCTAGAGTG...TCTTCTTCCCAACATCATCAGACTGCCCTTTCCAAGCTCCCAATGTGTCCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR TCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAACAGCAATTATCTCATTaGGCAGCCTCAGACACTCTA +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQQQLSH*AASDTL
Trigger: TAGAGTGTCTGAGGCTGCTCAATGAGATAATTGCTG...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp AGTGGGTTGAAGTCCTTCGACTGCTTCCACTGTTTCTGCGAGTTGAGCTGCTCACAGCAATTATCTCATTaGGCAGCCTCAGACACTCTA +
Preference number: 4 (lower is better)
Translates to: SGLKSFDCFHCFCELSCSQQLSH*AASDTL
Trigger: TAGAGTGTCTGAGGCTGCTCAATGAGATAATTGCTG...TGAGCAGCTCAACTCGCAGAAACAGTGGAAGCAGTCGAAGGACTTCAACCCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554781.5
ENST00000557056.5
ENST00000642397.1
ENST00000643432.1
CDS-3UTR TCA 90 bp GGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAAGCGGAAGTTGTTGAATaGATGCTTGTTGATGACGTC +
Preference number: 4 (lower is better)
Translates to: GLQTPQSLFIEVLRRRVQAEVVE*MLVDDV
Trigger: GACGTCATCAACAAGCATTCATTCAACAACTTCCGC...TTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR TCA 90 bp TGGGAAGAAGAACAGGCTGGTAATGGCCATGGCAAAGACAAGGAGGATGGTGGCGATACACACTGGGTGTaGCTTATGTCTGTTCTAATC +
Preference number: 4 (lower is better)
Translates to: WEEEQAGNGHGKDKEDGGDTHWV*LMSVLI
Trigger: GATTAGAACAGACATAAGTCACACCCAGTGTGTATC...GCCACCATCCTCCTTGTCTTTGCCATGGCCATTACCAGCCTGTTCTTCTTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557056.5
ENST00000642397.1
CDS-3UTR GCA 90 bp TCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTTCTGCGAGTTGAGCTaGTCAATGACCTGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: SMGSRHPRVSLLRFLEGEFCELS*SMTWKN
Trigger: GTTCTTCCAGGTCATTGAGCAGCTCAACTCGCAGAA...CTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp AATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGTGCTTCCACTGTTTCTaGGAGTTGAGCTGCTCAATG +
Preference number: 4 (lower is better)
Translates to: NGLQTPQSLFIEVLRRRVCFHCF*ELSCSM
Trigger: CATTGAGCAGCTCAACTCGCAGAAACAGTGGAAGCA...CACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp GGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAAGGCGAGTGCAATTTTGAAGGCGGGGATTaGAGAGAGTCGGTACTCTTT +
Preference number: 4 (lower is better)
Translates to: GSRHPRVSLLRFLEGECNFEGGD*RESVLF
Trigger: AAAGAGTACCGACTCTCTGCAATCCCCGCCTTCAAA...ATTGCACTCGCCTTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000310677.8
ENST00000418030.7
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp CAGACATCAATGGGCTCCAGACACCCCAGAGTCTCTTTATTGAGGTTCTTAGAATTCAGCATCCTGTTGTaGATCCTGTCCAGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: QTSMGSRHPRVSLLRFLEFSILL*ILSRGG
Trigger: GCCACCTCTGGACAGGATGCACAACAGGATGCTGAA...TTCTAAGAACCTCAATAAAGAGACTCTGGGGTGTCTGGAGCCCATTGATGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310677.8
ENST00000557056.5
ENST00000642397.1
ENST00000644961.1
CDS-3UTR GCA 90 bp TCTTCTTCCACAGGAAGTCCAGGCGGCAGTAGTACTCATTCTGGCGAGCCAGGAAAGTTGTTGAATGAATaGTTGTTGATGACGTCCAGC +