RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADCK5 (Homo sapiens)

Ensembl gene IDs: ENSG00000173137

Ensembl transcript IDs: ENST00000308860.11, ENST00000525136.1, ENST00000526231.6, ENST00000526833.2, ENST00000529654.5, ENST00000532190.2, ENST00000533715.2, ENST00000534714.5, ENST00000642585.1, ENST00000643493.1, ENST00000644530.1, ENST00000645307.1, ENST00000645946.1, ENST00000645968.2, ENST00000646054.1, ENST00000647088.1

Found 517 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCAGTGCGGCTGCGTGCGCCCTCATGGCGGCGTCGTCCCGCAGGATaGTGGCCCGCCACAGCTGGCAGAGGGCTGCGCGGTCCTTCTCCT +
Preference number: 1 (lower is better)
Translates to: PVRLRAPSWRRRPAG*WPATAGRGLRGPSP
Trigger: AGGAGAAGGACCGCGCAGCCCTCTGCCAGCTGTGGCGGGCCATCATCCTGCGGGACGACGCCGCCATGAGGGCGCACGCAGCCGCACTGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR GCA 90 bp CTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTaGACCCTAGGTCTCCAGGTACTGGTAGAGCTCCTCCGCTGGGGG +
Preference number: 1 (lower is better)
Translates to: LRQPKVKRAPPALGG*TLGLQVLVELLRWG
Trigger: CCCCCAGCGGAGGAGCTCTACCAGTACCTGGAGACCTAGGGTGCAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR GCA 90 bp CGACGTAGGGGAAGTGCGCCAGCTCCCGCGCACAGCGCTCTGCGTTaGGGCCCTCATTCTCGAAGTCCAGCTCCTGGGCCAGGGTCCCCT +
Preference number: 1 (lower is better)
Translates to: RRRGSAPAPAHSALR*GPHSRSPAPGPGSP
Trigger: AGGGGACCCTGGCCCAGGAGCTGGACTTCGAGAATGAGGGCCGCAACGCAGAGCGCTGTGCGCGGGAGCTGGCGCACTTCCCCTACGTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR GCA 90 bp CACCACGACGTAGGGGAAGTGCGCCAGCTCCCGCGCACAGCGCTCTaGGTTGCGGCCCTCATTCTCGAAGTCCAGCTCCTGGGCCAGGGT +
Preference number: 1 (lower is better)
Translates to: HHDVGEVRQLPRTAL*VAALILEVQLLGQG
Trigger: ACCCTGGCCCAGGAGCTGGACTTCGAGAATGAGGGCCGCAACGCAGAGCGCTGTGCGCGGGAGCTGGCGCACTTCCCCTACGTCGTGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR CCA 90 bp GTGCAGCTTGGCTCTGTGCACCTGTGCCAGGCTGGCGGCAGCAATTaGCTGGTAGTCAAACTCCTGGAAGAGCTCGTGGGGGAGGGCCTG +
Preference number: 1 (lower is better)
Translates to: VQLGSVHLCQAGGSN*LVVKLLEELVGEGL
Trigger: CAGGCCCTCCCCCACGAGCTCTTCCAGGAGTTTGACTACCAGCCAATTGCTGCCGCCAGCCTGGCACAGGTGCACAGAGCCAAGCTGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
3UTR CCA 90 bp CTGGGGTGCATGACCTCAACGAGCCGCAGCAGGAGCTCCAGGGTGTaGATGTCCCCATCAAAGCGGTCCCGCAGGTCGATGTACTGCACC +
Preference number: 1 (lower is better)
Translates to: LGCMTSTSRSRSSRV*MSPSKRSRRSMYCT
Trigger: GGTGCAGTACATCGACCTGCGGGACCGCTTTGATGGGGACATCCACACCCTGGAGCTCCTGCTGCGGCTCGTTGAGGTCATGCACCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR CCA 90 bp CGATGTACTGCACCTTCACAGCCACGCTGGTGCCATCGTGCAGCTTaGCTCTGTGCACCTGTGCCAGGCTGGCGGCAGCAATTGGCTGGT +
Preference number: 1 (lower is better)
Translates to: RCTAPSQPRWCHRAA*LCAPVPGWRQQLAG
Trigger: ACCAGCCAATTGCTGCCGCCAGCCTGGCACAGGTGCACAGAGCCAAGCTGCACGATGGCACCAGCGTGGCTGTGAAGGTGCAGTACATCG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR GCA 90 bp CACAGCCACGCTGGTGCCATCGTGCAGCTTGGCTCTGTGCACCTGTaGCAGGCTGGCGGCAGCAATTGGCTGGTAGTCAAACTCCTGGAA +
Preference number: 1 (lower is better)
Translates to: HSHAGAIVQLGSVHL*QAGGSNWLVVKLLE
Trigger: TTCCAGGAGTTTGACTACCAGCCAATTGCTGCCGCCAGCCTGGCACAGGTGCACAGAGCCAAGCTGCACGATGGCACCAGCGTGGCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
3UTR CCA 90 bp CGCTGGTGCCATCGTGCAGCTTGGCTCTGTGCACCTGTGCCAGGCTaGCGGCAGCAATTGGCTGGTAGTCAAACTCCTGGAAGAGCTCGT +
Preference number: 1 (lower is better)
Translates to: RWCHRAAWLCAPVPG*RQQLAGSQTPGRAR
Trigger: ACGAGCTCTTCCAGGAGTTTGACTACCAGCCAATTGCTGCCGCCAGCCTGGCACAGGTGCACAGAGCCAAGCTGCACGATGGCACCAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
3UTR GCA 90 bp AGTAGCCTGGGCTGTTCTCTTCCACCCCTCGAAGGACAACATTGGTaGACCACCAGTAGTCCAGGGAGATCTGCAGGCCGACCTTCAGAG +
Preference number: 1 (lower is better)
Translates to: SSLGCSLPPLEGQHW*TTSSPGRSAGRPSE
Trigger: CTCTGAAGGTCGGCCTGCAGATCTCCCTGGACTACTGGTGGTGCACCAATGTTGTCCTTCGAGGGGTGGAAGAGAACAGCCCAGGCTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533715.2
ENST00000644530.1
3UTR CCA 90 bp CCAAGTAGCCTGGGCTGTTCTCTTCCACCCCTCGAAGGACAACATTaGTGCACCACCAGTAGTCCAGGGAGATCTGCAGGCCGACCTTCA +
Preference number: 1 (lower is better)
Translates to: PSSLGCSLPPLEGQH*CTTSSPGRSAGRPS
Trigger: TGAAGGTCGGCCTGCAGATCTCCCTGGACTACTGGTGGTGCACCAATGTTGTCCTTCGAGGGGTGGAAGAGAACAGCCCAGGCTACTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533715.2
ENST00000644530.1
3UTR-3UTR TCA 90 bp CGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCACCCTAGGTCGCAGAAGTCGGCAGTaGGCACGCGCTGGGGAGAGC +
Preference number: 2 (lower is better)
Translates to: RQPKVKRAPPALGGCTLGRRSRQ*ARAGES
Trigger: GCTCTCCCCAGCGCGTGCTCACTGCCGACTTCTGCG...ACCTAGGGTGCAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR-3UTR GCA 90 bp CGGCAGCTCCCTGAGCACCGCCATGACGGCCTCGAAGCGCTCGCGGGCCATGTCCTGGACTTGTCCCAGTaGACGCGGGGCACCACGACG +
Preference number: 2 (lower is better)
Translates to: RQLPEHRHDGLEALAGHVLDLSQ*TRGTTT
Trigger: CGTCGTGGTGCCCCGCGTGCACTGGGACAAGTCCAG...GACATGGCCCGCGAGCGCTTCGAGGCCGTCATGGCGGTGCTCAGGGAGCTGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR-3UTR TCA 90 bp GAGGTAGTCTTGCACCCCCAGTGCGGCTGCGTGCGCCCTCATGGCGGCGTCGTCCCTGGAAGCCCCGCTTaGGGGCCCTGTCCTCTAGCA +
Preference number: 2 (lower is better)
Translates to: EVVLHPQCGCVRPHGGVVPGSPA*GPCPLA
Trigger: TGCTAGAGGACAGGGCCCTCAAGCGGGGCTTCCAGG...GACGACGCCGCCATGAGGGCGCACGCAGCCGCACTGGGGGTGCAAGACTACCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR-3UTR TCA 90 bp CCCCGCTTGAGGGCCCTGTCCTCTAGCACGCGCAGGGTCCGGGTATACTCGGGGTCAGCCGCCCGCTGGTaGCACGCAGACATCACCTCC +
Preference number: 2 (lower is better)
Translates to: PRLRALSSSTRRVRVYSGSAARW*HADITS
Trigger: GGAGGTGATGTCTGCGTGTCACCAGCGGGCGGCTGA...CCCCGAGTATACCCGGACCCTGCGCGTGCTAGAGGACAGGGCCCTCAAGCGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526833.2
ENST00000533715.2
ENST00000642585.1
ENST00000644530.1
3UTR-3UTR TCA 90 bp GCTGATGGCCCCTGCCACCAGGGCATCAGCCGCCCGCTGGTGACACGCAGACATCCTGGAAGCCCCGCTTaGGGGCCCTGTCCTCTAGCA +
Preference number: 2 (lower is better)
Translates to: ADGPCHQGISRPLVTRRHPGSPA*GPCPLA
Trigger: TGCTAGAGGACAGGGCCCTCAAGCGGGGCTTCCAGG...ATGTCTGCGTGTCACCAGCGGGCGGCTGATGCCCTGGTGGCAGGGGCCATCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000526833.2
ENST00000533715.2
ENST00000642585.1
ENST00000644530.1
3UTR-3UTR GCA 90 bp GTGGCGCAGGAGGCTGGTGCCGTAGACACCCCGATACGTGGCGCCCGCCAGGCGCACAGCGCTCTGCGTTaGGGCCCTCATTCTCGAAGT +
Preference number: 2 (lower is better)
Translates to: VAQEAGAVDTPIRGARQAHSALR*GPHSRS
Trigger: ACTTCGAGAATGAGGGCCGCAACGCAGAGCGCTGTG...CGCCTGGCGGGCGCCACGTATCGGGGTGTCTACGGCACCAGCCTCCTGCGCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR-3UTR GCA 90 bp CGGCAGCTCCCTGAGCACCGCCATGACGGCCTCGAAGCGCTCGCGGGCCATGTCTGGCCCAGCCCACCTTaGTGGACTTGTCCCAGTGCA +
Preference number: 2 (lower is better)
Translates to: RQLPEHRHDGLEALAGHVWPSPP*WTCPSA
Trigger: TGCACTGGGACAAGTCCAGCAAGGTGGGCTGGGCCA...GACATGGCCCGCGAGCGCTTCGAGGCCGTCATGGCGGTGCTCAGGGAGCTGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR-3UTR CCA 90 bp GGGGCACCACGACGTAGGGGAAGTGCGCCAGCTCCCGCGCACAGCGCTCTGCGTCCTTCACAGCCACGCTaGTGCCATCGTGCAGCTTGG +
Preference number: 2 (lower is better)
Translates to: GAPRRRGSAPAPAHSALRPSQPR*CHRAAW
Trigger: CCAAGCTGCACGATGGCACCAGCGTGGCTGTGAAGG...ACGCAGAGCGCTGTGCGCGGGAGCTGGCGCACTTCCCCTACGTCGTGGTGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR-3UTR CCA 90 bp CCAGTGCACGCGGGGCACCACGACGTAGGGGAAGTGCGCCAGCTCCCGCGCACAGTCCCCTTCAGGTCCTaGAGGACCCAGCTGAAGCCA +
Preference number: 2 (lower is better)
Translates to: PVHAGHHDVGEVRQLPRTVPFRS*RTQLKP
Trigger: TGGCTTCAGCTGGGTCCTCCAGGACCTGAAGGGGAC...TGTGCGCGGGAGCTGGCGCACTTCCCCTACGTCGTGGTGCCCCGCGTGCACTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR-3UTR CCA 90 bp GTTGATAGCGCGCACGGTGTTGATGTTGCGCAGCACCAGCAGCATGGGCCGCGGCTGCGTGCGCCCTCATaGCGGCGTCGTCCCGCAGGA +
Preference number: 2 (lower is better)
Translates to: VDSAHGVDVAQHQQHGPRLRAPS*RRRPAG
Trigger: TCCTGCGGGACGACGCCGCCATGAGGGCGCACGCAG...CCGCGGCCCATGCTGCTGGTGCTGCGCAACATCAACACCGTGCGCGCTATCAAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR-3UTR TCA 90 bp ACGCTGGTGCCATCGTGCAGCTTGGCTCTGTGCACCTGTGCCAGGCTGGCGGCATCAGCCGCCCGCTGGTaGCACGCAGACATCACCTCC +
Preference number: 2 (lower is better)
Translates to: TLVPSCSLALCTCARLAASAARW*HADITS
Trigger: GGAGGTGATGTCTGCGTGTCACCAGCGGGCGGCTGA...TGCCGCCAGCCTGGCACAGGTGCACAGAGCCAAGCTGCACGATGGCACCAGCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533715.2
ENST00000644530.1
3UTR-3UTR GCA 90 bp CCCCGCTTGAGGGCCCTGTCCTCTAGCACGCGCAGGGTCCGGGTATACTCGGGGACGCTGGTGCCATCGTaGAGCTTGGCTCTGTGCACC +
Preference number: 2 (lower is better)
Translates to: PRLRALSSSTRRVRVYSGTLVPS*SLALCT
Trigger: GGTGCACAGAGCCAAGCTGCACGATGGCACCAGCGT...CCCCGAGTATACCCGGACCCTGCGCGTGCTAGAGGACAGGGCCCTCAAGCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
3UTR-3UTR GCA 90 bp CGGCAGCTCCCTGAGCACCGCCATGACGGCCTCGAAGCGCTCGCGGGCCATGTCAAGCCAAAGCTGGGGTaGATGACCTCAACGAGCCGC +
Preference number: 2 (lower is better)
Translates to: RQLPEHRHDGLEALAGHVKPKLG*MTSTSR
Trigger: GCGGCTCGTTGAGGTCATGCACCCCAGCTTTGGCTT...GACATGGCCCGCGAGCGCTTCGAGGCCGTCATGGCGGTGCTCAGGGAGCTGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR-3UTR GCA 90 bp CGGCAGCTCCCTGAGCACCGCCATGACGGCCTCGAAGCGCTCGCGGGCCATGTCCACAGCGCTCTGCGTTaGGGCCCTCATTCTCGAAGT +
Preference number: 2 (lower is better)
Translates to: RQLPEHRHDGLEALAGHVHSALR*GPHSRS
Trigger: ACTTCGAGAATGAGGGCCGCAACGCAGAGCGCTGTG...GACATGGCCCGCGAGCGCTTCGAGGCCGTCATGGCGGTGCTCAGGGAGCTGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR-3UTR CCA 90 bp CACCCTAGGTCTCCAGGTACTGGTAGAGCTCCTCCGCTGGGGGCACGAGGCTCACAGACGACCTTGGCGTaGCGCAGGAGGCTGGTGCCG +
Preference number: 2 (lower is better)
Translates to: HPRSPGTGRAPPLGARGSQTTLA*RRRLVP
Trigger: CGGCACCAGCCTCCTGCGCCACGCCAAGGTCGTCTG...TGAGCCTCGTGCCCCCAGCGGAGGAGCTCTACCAGTACCTGGAGACCTAGGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR-3UTR TCA 90 bp CTGCCACCAGGGCATCAGCCGCCCGCTGGTGACACGCAGACATCACCTCCAAGTCCTGGAAGCCCCGCTTaGGGGCCCTGTCCTCTAGCA +
Preference number: 2 (lower is better)
Translates to: LPPGHQPPAGDTQTSPPSPGSPA*GPCPLA
Trigger: TGCTAGAGGACAGGGCCCTCAAGCGGGGCTTCCAGG...ACTTGGAGGTGATGTCTGCGTGTCACCAGCGGGCGGCTGATGCCCTGGTGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526833.2
ENST00000533715.2
ENST00000642585.1
ENST00000644530.1
3UTR-3UTR GCA 90 bp CTCATGGCGGCGTCGTCCCGCAGGATGATGGCCCGCCACAGCTGGCAGAGGGCTAAGCCAAAGCTGGGGTaGATGACCTCAACGAGCCGC +
Preference number: 2 (lower is better)
Translates to: LMAASSRRMMARHSWQRAKPKLG*MTSTSR
Trigger: GCGGCTCGTTGAGGTCATGCACCCCAGCTTTGGCTT...AGCCCTCTGCCAGCTGTGGCGGGCCATCATCCTGCGGGACGACGCCGCCATGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR-3UTR GCA 90 bp GTTGATAGCGCGCACGGTGTTGATGTTGCGCAGCACCAGCAGCATGGGCCGCGGCTGGACTTGTCCCAGTaGACGCGGGGCACCACGACG +
Preference number: 2 (lower is better)
Translates to: VDSAHGVDVAQHQQHGPRLDLSQ*TRGTTT
Trigger: CGTCGTGGTGCCCCGCGTGCACTGGGACAAGTCCAG...CCGCGGCCCATGCTGCTGGTGCTGCGCAACATCAACACCGTGCGCGCTATCAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR-3UTR GCA 90 bp CACAGCCACGCTGGTGCCATCGTGCAGCTTGGCTCTGTGCACCTGTGCCAGGCTGTTGCTGATGGCCCCTaGCACCAGGGCATCAGCCGC +
Preference number: 2 (lower is better)
Translates to: HSHAGAIVQLGSVHLCQAVADGP*HQGISR
Trigger: GCGGCTGATGCCCTGGTGGCAGGGGCCATCAGCAAC...AGCCTGGCACAGGTGCACAGAGCCAAGCTGCACGATGGCACCAGCGTGGCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533715.2
ENST00000644530.1
3UTR-3UTR CCA 90 bp CTCATGGCGGCGTCGTCCCGCAGGATGATGGCCCGCCACAGCTGGCAGAGGGCTTCGTGGGGGAGGGCCTaGAAGTCCTCAAGGAACAAC +
Preference number: 2 (lower is better)
Translates to: LMAASSRRMMARHSWQRASWGRA*KSSRNN
Trigger: GTTGTTCCTTGAGGACTTCCAGGCCCTCCCCCACGA...AGCCCTCTGCCAGCTGTGGCGGGCCATCATCCTGCGGGACGACGCCGCCATGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR-3UTR CCA 90 bp TGGAAGCCCCGCTTGAGGGCCCTGTCCTCTAGCACGCGCAGGGTCCGGGTATACTCCTGGAAGAGCTCGTaGGGGAGGGCCTGGAAGTCC +
Preference number: 2 (lower is better)
Translates to: WKPRLRALSSSTRRVRVYSWKSS*GRAWKS
Trigger: GGACTTCCAGGCCCTCCCCCACGAGCTCTTCCAGGA...GTATACCCGGACCCTGCGCGTGCTAGAGGACAGGGCCCTCAAGCGGGGCTTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
3UTR-3UTR CCA 90 bp CGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCACCCTAGGTAACGTTGCCAGGATGTaGGTCCGAGTGGATGAAGCC +
Preference number: 2 (lower is better)
Translates to: RQPKVKRAPPALGGCTLGNVARM*VRVDEA
Trigger: GGCTTCATCCACTCGGACCCACATCCTGGCAACGTT...ACCTAGGGTGCAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR-3UTR CCA 90 bp AGGTCTCCAGGTACTGGTAGAGCTCCTCCGCTGGGGGCACGAGGCTCAGGTGGACGTGGCGCAGGAGGCTaGTGCCGTAGACACCCCGAT +
Preference number: 2 (lower is better)
Translates to: RSPGTGRAPPLGARGSGGRGAGG*CRRHPD
Trigger: ATCGGGGTGTCTACGGCACCAGCCTCCTGCGCCACG...TCCACCTGAGCCTCGTGCCCCCAGCGGAGGAGCTCTACCAGTACCTGGAGACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR-3UTR GCA 90 bp CACAGCCACGCTGGTGCCATCGTGCAGCTTGGCTCTGTGCACCTGTGCCAGGCTTGCAGCTTGGCTCTGTaGACCTGTGCCAGGCTGGCG +
Preference number: 2 (lower is better)
Translates to: HSHAGAIVQLGSVHLCQACSLAL*TCARLA
Trigger: CGCCAGCCTGGCACAGGTGCACAGAGCCAAGCTGCA...AGCCTGGCACAGGTGCACAGAGCCAAGCTGCACGATGGCACCAGCGTGGCTGTG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
3UTR-3UTR GCA 90 bp ACGCTGGTGCCATCGTGCAGCTTGGCTCTGTGCACCTGTGCCAGGCTGGCGGCATCACAGCCACGCTGGTaGCATCGTGCAGCTTGGCTC +
Preference number: 2 (lower is better)
Translates to: TLVPSCSLALCTCARLAASQPRW*HRAAWL
Trigger: GAGCCAAGCTGCACGATGGCACCAGCGTGGCTGTGA...TGCCGCCAGCCTGGCACAGGTGCACAGAGCCAAGCTGCACGATGGCACCAGCGT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
3UTR-3UTR GCA 90 bp CGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCACCCTAGGTTTTTCTGCTATGTCATaGACTGCCAGCCCCTGGCTC +
Preference number: 2 (lower is better)
Translates to: RQPKVKRAPPALGGCTLGFSAMS*TASPWL
Trigger: GAGCCAGGGGCTGGCAGTGCATGACATAGCAGAAAA...ACCTAGGGTGCAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR-3UTR CCA 90 bp GCTGATGGCCCCTGCCACCAGGGCATCAGCCGCCCGCTGGTGACACGCAGACATCACCTCCAAGTAGCCTaGGCTCTTCCACCCCTCGAA +
Preference number: 2 (lower is better)
Translates to: ADGPCHQGISRPLVTRRHHLQVA*ALPPLE
Trigger: TTCGAGGGGTGGAAGAGCCCAGGCTACTTGGAGGTG...ATGTCTGCGTGTCACCAGCGGGCGGCTGATGCCCTGGTGGCAGGGGCCATCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526833.2
ENST00000642585.1
3UTR CAA 90 bp CGTGCAGCTTGGCTCTGTGCACCTGTGCCAGGCTGGCGGCAGCAATaGGCTGGTAGTCAAACTCCTGGAAGAGCTCGTGGGGGAGGGCCT +
Preference number: 2 (lower is better)
Translates to: RAAWLCAPVPGWRQQ*AGSQTPGRARGGGP
Trigger: AGGCCCTCCCCCACGAGCTCTTCCAGGAGTTTGACTACCAGCCAATTGCTGCCGCCAGCCTGGCACAGGTGCACAGAGCCAAGCTGCACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
3UTR-3UTR TCA 90 bp AACAACTCATCCACCTCCTGGAAGCCCCGCTTGAGGGCCCTGTCCTCTAGCACGCCTGGAAGCCCCGCTTaGGGGCCCTGTCCTCTAGCA +
Preference number: 2 (lower is better)
Translates to: NNSSTSWKPRLRALSSSTPGSPA*GPCPLA
Trigger: TGCTAGAGGACAGGGCCCTCAAGCGGGGCTTCCAGG...CGTGCTAGAGGACAGGGCCCTCAAGCGGGGCTTCCAGGAGGTGGATGAGTTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
3UTR-3UTR TCA 90 bp CATCAAAGCGGTCCCGCAGGTCGATGTACTGCACCTTCACAGCCACGCTGGTGCCCTGGAAGCCCCGCTTaGGGGCCCTGTCCTCTAGCA +
Preference number: 2 (lower is better)
Translates to: HQSGPAGRCTAPSQPRWCPGSPA*GPCPLA
Trigger: TGCTAGAGGACAGGGCCCTCAAGCGGGGCTTCCAGG...GCACCAGCGTGGCTGTGAAGGTGCAGTACATCGACCTGCGGGACCGCTTTGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR-3UTR TCA 90 bp CAGGCTGGCGGCAGCAATTGGCTGGTAGTCAAACTCCTGGAAGAGCTCGTGGGGCCCGTGCCTCTGCCATaGCATAGCGGGCTCCGAGGA +
Preference number: 2 (lower is better)
Translates to: QAGGSNWLVVKLLEELVGPVPLP*HSGLRG
Trigger: TCCTCGGAGCCCGCTATGTCATGGCAGAGGCACGGG...CCCCACGAGCTCTTCCAGGAGTTTGACTACCAGCCAATTGCTGCCGCCAGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533715.2
ENST00000644530.1
3UTR-3UTR GCA 90 bp AGGTCTCCAGGTACTGGTAGAGCTCCTCCGCTGGGGGCACGAGGCTCAGGTGGATCACAGCCACGCTGGTaGCATCGTGCAGCTTGGCTC +
Preference number: 2 (lower is better)
Translates to: RSPGTGRAPPLGARGSGGSQPRW*HRAAWL
Trigger: GAGCCAAGCTGCACGATGGCACCAGCGTGGCTGTGA...TCCACCTGAGCCTCGTGCCCCCAGCGGAGGAGCTCTACCAGTACCTGGAGACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR-3UTR GCA 90 bp GTTGATAGCGCGCACGGTGTTGATGTTGCGCAGCACCAGCAGCATGGGCCGCGGTGGCCCAGCCCACCTTaGTGGACTTGTCCCAGTGCA +
Preference number: 2 (lower is better)
Translates to: VDSAHGVDVAQHQQHGPRWPSPP*WTCPSA
Trigger: TGCACTGGGACAAGTCCAGCAAGGTGGGCTGGGCCA...CCGCGGCCCATGCTGCTGGTGCTGCGCAACATCAACACCGTGCGCGCTATCAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR-3UTR GCA 90 bp CTCATGGCGGCGTCGTCCCGCAGGATGATGGCCCGCCACAGCTGGCAGAGGGCTTTTTCTGCTATGTCATaGACTGCCAGCCCCTGGCTC +
Preference number: 2 (lower is better)
Translates to: LMAASSRRMMARHSWQRAFSAMS*TASPWL
Trigger: GAGCCAGGGGCTGGCAGTGCATGACATAGCAGAAAA...AGCCCTCTGCCAGCTGTGGCGGGCCATCATCCTGCGGGACGACGCCGCCATGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR CAA 90 bp TCGATGTACTGCACCTTCACAGCCACGCTGGTGCCATCGTGCAGCTaGGCTCTGTGCACCTGTGCCAGGCTGGCGGCAGCAATTGGCTGG +
Preference number: 2 (lower is better)
Translates to: SMYCTFTATLVPSCS*ALCTCARLAAAIGW
Trigger: CCAGCCAATTGCTGCCGCCAGCCTGGCACAGGTGCACAGAGCCAAGCTGCACGATGGCACCAGCGTGGCTGTGAAGGTGCAGTACATCGA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR-3UTR TCA 90 bp TCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCACCCTAGGTCTGTGGGTCCGAGTGGATaGAGCCGGTGTAAAATATCT +
Preference number: 2 (lower is better)
Translates to: SAQGEKGPAGPGRLHPRSVGPSG*SRCKIS
Trigger: AGATATTTTACACCGGCTTCATCCACTCGGACCCAC...AGACCTAGGGTGCAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR-3UTR GCA 90 bp GGCCAAGGTCTCCAGCCTGAGCGCCACTTCAAACTTGAGCATCTCCCAGACGACCAGCTGGCAGAGGGCTaGGCGGTCCTTCTCCTCCAG +
Preference number: 2 (lower is better)
Translates to: GQGLQPERHFKLEHLPDDQLAEG*AVLLLQ
Trigger: CTGGAGGAGAAGGACCGCGCAGCCCTCTGCCAGCTG...GTCGTCTGGGAGATGCTCAAGTTTGAAGTGGCGCTCAGGCTGGAGACCTTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR-3UTR CCA 90 bp AACAACTCATCCACCTCCTGGAAGCCCCGCTTGAGGGCCCTGTCCTCTAGCACGGCACCTGTGCCAGGCTaGCGGCAGCAATTGGCTGGT +
Preference number: 2 (lower is better)
Translates to: NNSSTSWKPRLRALSSSTAPVPG*RQQLAG
Trigger: ACCAGCCAATTGCTGCCGCCAGCCTGGCACAGGTGC...CGTGCTAGAGGACAGGGCCCTCAAGCGGGGCTTCCAGGAGGTGGATGAGTTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
3UTR-3UTR CCA 90 bp TGCTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACGCAGTGAGCACGCGCTaGGGAGAGCAAGAGGCTGGG +
Preference number: 2 (lower is better)
Translates to: CLRGVCGHYTASWPSCCHAVSTR*GEQEAG
Trigger: CCCAGCCTCTTGCTCTCCCCAGCGCGTGCTCACTGC...GTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR-3UTR GCA 90 bp ATGTCCCCATCAAAGCGGTCCCGCAGGTCGATGTACTGCACCTTCACAGCCACGTGCAGCTTGGCTCTGTaGACCTGTGCCAGGCTGGCG +
Preference number: 2 (lower is better)
Translates to: MSPSKRSRRSMYCTFTATCSLAL*TCARLA
Trigger: CGCCAGCCTGGCACAGGTGCACAGAGCCAAGCTGCA...CGTGGCTGTGAAGGTGCAGTACATCGACCTGCGGGACCGCTTTGATGGGGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR-3UTR GCA 90 bp CCGCACCAGAACGTTGCCAGGATGTGGGTCCGAGTGGATGAAGCCGGTGTAAAACCGCGCACAGCGCTCTaGGTTGCGGCCCTCATTCTC +
Preference number: 2 (lower is better)
Translates to: PHQNVARMWVRVDEAGVKPRTAL*VAALIL
Trigger: GAGAATGAGGGCCGCAACGCAGAGCGCTGTGCGCGG...TTTTACACCGGCTTCATCCACTCGGACCCACATCCTGGCAACGTTCTGGTGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR-3UTR GCA 90 bp GGTAGTCAAACTCCTGGAAGAGCTCGTGGGGGAGGGCCTGGAAGTCCTCAAGGATGCCAAAGCGCCCCATaGCATCCACCACGAGCCGCA +
Preference number: 2 (lower is better)
Translates to: GSQTPGRARGGGPGSPQGCQSAP*HPPRAA
Trigger: TGCGGCTCGTGGTGGATGGCATGGGGCGCTTTGGCA...TCCTTGAGGACTTCCAGGCCCTCCCCCACGAGCTCTTCCAGGAGTTTGACTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000533715.2
ENST00000644530.1
3UTR-3UTR CCA 90 bp TGGCTGGTAGTCAAACTCCTGGAAGAGCTCGTGGGGGAGGGCCTGGAAGTCCTCAACTCATCCACCTCCTaGAAGCCCCGCTTGAGGGCC +
Preference number: 2 (lower is better)
Translates to: WLVVKLLEELVGEGLEVLNSSTS*KPRLRA
Trigger: GGCCCTCAAGCGGGGCTTCCAGGAGGTGGATGAGTT...GAGGACTTCCAGGCCCTCCCCCACGAGCTCTTCCAGGAGTTTGACTACCAGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
3UTR-3UTR CCA 90 bp AGAGCTCGTGGGGGAGGGCCTGGAAGTCCTCAAGGAACAACTCATCCACCTCCTTCCTGGAAGAGCTCGTaGGGGAGGGCCTGGAAGTCC +
Preference number: 2 (lower is better)
Translates to: RARGGGPGSPQGTTHPPPSWKSS*GRAWKS
Trigger: GGACTTCCAGGCCCTCCCCCACGAGCTCTTCCAGGA...AGGAGGTGGATGAGTTGTTCCTTGAGGACTTCCAGGCCCTCCCCCACGAGCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
3UTR-3UTR CCA 90 bp AGGTCTCCAGGTACTGGTAGAGCTCCTCCGCTGGGGGCACGAGGCTCAGGTGGAGCTGGCGGCAGCAATTaGCTGGTAGTCAAACTCCTG +
Preference number: 2 (lower is better)
Translates to: RSPGTGRAPPLGARGSGGAGGSN*LVVKLL
Trigger: CAGGAGTTTGACTACCAGCCAATTGCTGCCGCCAGC...TCCACCTGAGCCTCGTGCCCCCAGCGGAGGAGCTCTACCAGTACCTGGAGACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR-3UTR CCA 90 bp GGCCAAGGTCTCCAGCCTGAGCGCCACTTCAAACTTGAGCATCTCCCAGACGACGCACCTGTGCCAGGCTaGCGGCAGCAATTGGCTGGT +
Preference number: 2 (lower is better)
Translates to: GQGLQPERHFKLEHLPDDAPVPG*RQQLAG
Trigger: ACCAGCCAATTGCTGCCGCCAGCCTGGCACAGGTGC...GTCGTCTGGGAGATGCTCAAGTTTGAAGTGGCGCTCAGGCTGGAGACCTTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR-3UTR CCA 90 bp ATGTCCCCATCAAAGCGGTCCCGCAGGTCGATGTACTGCACCTTCACAGCCACGGCACCTGTGCCAGGCTaGCGGCAGCAATTGGCTGGT +
Preference number: 2 (lower is better)
Translates to: MSPSKRSRRSMYCTFTATAPVPG*RQQLAG
Trigger: ACCAGCCAATTGCTGCCGCCAGCCTGGCACAGGTGC...CGTGGCTGTGAAGGTGCAGTACATCGACCTGCGGGACCGCTTTGATGGGGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR-3UTR CCA 90 bp ACCTTCACAGCCACGCTGGTGCCATCGTGCAGCTTGGCTCTGTGCACCTGTGCCTGCCATCGTGCAGCTTaGCTCTGTGCACCTGTGCCA +
Preference number: 2 (lower is better)
Translates to: TFTATLVPSCSLALCTCACHRAA*LCAPVP
Trigger: TGGCACAGGTGCACAGAGCCAAGCTGCACGATGGCA...GGCACAGGTGCACAGAGCCAAGCTGCACGATGGCACCAGCGTGGCTGTGAAGGT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
3UTR-3UTR GCA 90 bp GTAGTCAAACTCCTGGAAGAGCTCGTGGGGGAGGGCCTGGAAGTCCTCAAGGAATGCAGCTTGGCTCTGTaGACCTGTGCCAGGCTGGCG +
Preference number: 2 (lower is better)
Translates to: VVKLLEELVGEGLEVLKECSLAL*TCARLA
Trigger: CGCCAGCCTGGCACAGGTGCACAGAGCCAAGCTGCA...TTCCTTGAGGACTTCCAGGCCCTCCCCCACGAGCTCTTCCAGGAGTTTGACTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
3UTR-3UTR GCA 90 bp CCTGGAAGAGCTCGTGGGGGAGGGCCTGGAAGTCCTCAAGGAACAACTCATCCATCACAGCCACGCTGGTaGCATCGTGCAGCTTGGCTC +
Preference number: 2 (lower is better)
Translates to: PGRARGGGPGSPQGTTHPSQPRW*HRAAWL
Trigger: GAGCCAAGCTGCACGATGGCACCAGCGTGGCTGTGA...TGGATGAGTTGTTCCTTGAGGACTTCCAGGCCCTCCCCCACGAGCTCTTCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
3UTR-3UTR GCA 90 bp TCCTGGAAGAGCTCGTGGGGGAGGGCCTGGAAGTCCTCAAGGAACAACTCATCCTCACAGCCACGCTGGTaGCATCGTGCAGCTTGGCTC +
Preference number: 2 (lower is better)
Translates to: SWKSSWGRAWKSSRNNSSSQPRW*HRAAWL
Trigger: GAGCCAAGCTGCACGATGGCACCAGCGTGGCTGTGA...GGATGAGTTGTTCCTTGAGGACTTCCAGGCCCTCCCCCACGAGCTCTTCCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
3UTR-3UTR GCA 90 bp GAGGGCCTGGAAGTCCTCAAGGAACAACTCATCCACCTCCTGGAAGCCCCGCTTCTTCTCCCGTGCCTCTaGCATGACATAGCGGGCTCC +
Preference number: 2 (lower is better)
Translates to: EGLEVLKEQLIHLLEAPLLLPCL*HDIAGS
Trigger: GGAGCCCGCTATGTCATGGCAGAGGCACGGGAGAAG...AAGCGGGGCTTCCAGGAGGTGGATGAGTTGTTCCTTGAGGACTTCCAGGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533715.2
ENST00000644530.1
3UTR-3UTR CCA 90 bp CCTGGAAGAGCTCGTGGGGGAGGGCCTGGAAGTCCTCAAGGAACAACTCATCCAAACTCATCCACCTCCTaGAAGCCCCGCTTGAGGGCC +
Preference number: 2 (lower is better)
Translates to: PGRARGGGPGSPQGTTHPNSSTS*KPRLRA
Trigger: GGCCCTCAAGCGGGGCTTCCAGGAGGTGGATGAGTT...TGGATGAGTTGTTCCTTGAGGACTTCCAGGCCCTCCCCCACGAGCTCTTCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
3UTR-3UTR CCA 90 bp CGTGGGGGAGGGCCTGGAAGTCCTCAAGGAACAACTCATCCACCTCCTGGAAGCTGCCATCGTGCAGCTTaGCTCTGTGCACCTGTGCCA +
Preference number: 2 (lower is better)
Translates to: RGGGPGSPQGTTHPPPGSCHRAA*LCAPVP
Trigger: TGGCACAGGTGCACAGAGCCAAGCTGCACGATGGCA...GCTTCCAGGAGGTGGATGAGTTGTTCCTTGAGGACTTCCAGGCCCTCCCCCACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
3UTR-3UTR CCA 90 bp GGCCAAGGTCTCCAGCCTGAGCGCCACTTCAAACTTGAGCATCTCCCAGACGACGTCCCCTTCAGGTCCTaGAGGACCCAGCTGAAGCCA +
Preference number: 2 (lower is better)
Translates to: GQGLQPERHFKLEHLPDDVPFRS*RTQLKP
Trigger: TGGCTTCAGCTGGGTCCTCCAGGACCTGAAGGGGAC...GTCGTCTGGGAGATGCTCAAGTTTGAAGTGGCGCTCAGGCTGGAGACCTTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR-3UTR CCA 90 bp TGGAAGCCCCGCTTGAGGGCCCTGTCCTCTAGCACGCGCAGGGTCCGGGTATACCTCGAAGGACAACATTaGTGCACCACCAGTAGTCCA +
Preference number: 2 (lower is better)
Translates to: WKPRLRALSSSTRRVRVYLEGQH*CTTSSP
Trigger: TGGACTACTGGTGGTGCACCAATGTTGTCCTTCGAG...GTATACCCGGACCCTGCGCGTGCTAGAGGACAGGGCCCTCAAGCGGGGCTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526833.2
ENST00000533715.2
ENST00000642585.1
ENST00000644530.1
3UTR-3UTR TCA 90 bp CGCGGTCCTTCTCCTCCAGGAACTGGTAGAGCCCGTGGTCCAGCAGCACCAGCTGTGGGTCCGAGTGGATaGAGCCGGTGTAAAATATCT +
Preference number: 2 (lower is better)
Translates to: RGPSPPGTGRARGPAAPAVGPSG*SRCKIS
Trigger: AGATATTTTACACCGGCTTCATCCACTCGGACCCAC...AGCTGGTGCTGCTGGACCACGGGCTCTACCAGTTCCTGGAGGAGAAGGACCGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR-3UTR GCA 90 bp GTAGTCAAACTCCTGGAAGAGCTCGTGGGGGAGGGCCTGGAAGTCCTCAAGGAAACGCTGGTGCCATCGTaGAGCTTGGCTCTGTGCACC +
Preference number: 2 (lower is better)
Translates to: VVKLLEELVGEGLEVLKETLVPS*SLALCT
Trigger: GGTGCACAGAGCCAAGCTGCACGATGGCACCAGCGT...TTCCTTGAGGACTTCCAGGCCCTCCCCCACGAGCTCTTCCAGGAGTTTGACTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
3UTR-3UTR GCA 90 bp TCAAGGAACAACTCATCCACCTCCTGGAAGCCCCGCTTGAGGGCCCTGTCCTCTCGACCTTCAGAGACCTaGCAAAGCGCCCCATGCCAT +
Preference number: 2 (lower is better)
Translates to: SRNNSSTSWKPRLRALSSRPSET*QSAPCH
Trigger: ATGGCATGGGGCGCTTTGGCAGGTCTCTGAAGGTCG...AGAGGACAGGGCCCTCAAGCGGGGCTTCCAGGAGGTGGATGAGTTGTTCCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533715.2
ENST00000644530.1
3UTR-3UTR CCA 90 bp GTAGTCAAACTCCTGGAAGAGCTCGTGGGGGAGGGCCTGGAAGTCCTCAAGGAAAACTCATCCACCTCCTaGAAGCCCCGCTTGAGGGCC +
Preference number: 2 (lower is better)
Translates to: VVKLLEELVGEGLEVLKENSSTS*KPRLRA
Trigger: GGCCCTCAAGCGGGGCTTCCAGGAGGTGGATGAGTT...TTCCTTGAGGACTTCCAGGCCCTCCCCCACGAGCTCTTCCAGGAGTTTGACTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
3UTR-3UTR CCA 90 bp CTTGGCTCTGTGCACCTGTGCCAGGCTGGCGGCAGCAATTGGCTGGTAGTCAAATCGTGGGGGAGGGCCTaGAAGTCCTCAAGGAACAAC +
Preference number: 2 (lower is better)
Translates to: LGSVHLCQAGGSNWLVVKSWGRA*KSSRNN
Trigger: GTTGTTCCTTGAGGACTTCCAGGCCCTCCCCCACGA...TTTGACTACCAGCCAATTGCTGCCGCCAGCCTGGCACAGGTGCACAGAGCCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
3UTR-3UTR CCA 90 bp TCAAACTCCTGGAAGAGCTCGTGGGGGAGGGCCTGGAAGTCCTCAAGGAACAACTGCCATCGTGCAGCTTaGCTCTGTGCACCTGTGCCA +
Preference number: 2 (lower is better)
Translates to: SNSWKSSWGRAWKSSRNNCHRAA*LCAPVP
Trigger: TGGCACAGGTGCACAGAGCCAAGCTGCACGATGGCA...GTTGTTCCTTGAGGACTTCCAGGCCCTCCCCCACGAGCTCTTCCAGGAGTTTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
3UTR-3UTR GCA 90 bp GCTGTTCTCTTCCACCCCTCGAAGGACAACATTGGTGCACCACCAGTAGTCCAGCGACCTTCAGAGACCTaGCAAAGCGCCCCATGCCAT +
Preference number: 2 (lower is better)
Translates to: AVLFHPSKDNIGAPPVVQRPSET*QSAPCH
Trigger: ATGGCATGGGGCGCTTTGGCAGGTCTCTGAAGGTCG...CTGGACTACTGGTGGTGCACCAATGTTGTCCTTCGAGGGGTGGAAGAGAACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533715.2
ENST00000644530.1
3UTR-3UTR GCA 90 bp TCCTGGAAGAGCTCGTGGGGGAGGGCCTGGAAGTCCTCAAGGAACAACTCATCCGAAGGACAACATTGGTaGACCACCAGTAGTCCAGGG +
Preference number: 2 (lower is better)
Translates to: SWKSSWGRAWKSSRNNSSEGQHW*TTSSPG
Trigger: CCCTGGACTACTGGTGGTGCACCAATGTTGTCCTTC...GGATGAGTTGTTCCTTGAGGACTTCCAGGCCCTCCCCCACGAGCTCTTCCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533715.2
ENST00000644530.1
3UTR-3UTR CCA 90 bp GTCCGAGTGGATGAAGCCGGTGTAAAATATCTGCTCAGCAAAGGCCTTGATGAGGCAGTGAGCACGCGCTaGGGAGAGCAAGAGGCTGGG +
Preference number: 2 (lower is better)
Translates to: VRVDEAGVKYLLSKGLDEAVSTR*GEQEAG
Trigger: CCCAGCCTCTTGCTCTCCCCAGCGCGTGCTCACTGC...CTCATCAAGGCCTTTGCTGAGCAGATATTTTACACCGGCTTCATCCACTCGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR-3UTR CCA 90 bp CGAGTGGATGAAGCCGGTGTAAAATATCTGCTCAGCAAAGGCCTTGATGAGCTTTCCTGGAAGAGCTCGTaGGGGAGGGCCTGGAAGTCC +
Preference number: 2 (lower is better)
Translates to: RVDEAGVKYLLSKGLDELSWKSS*GRAWKS
Trigger: GGACTTCCAGGCCCTCCCCCACGAGCTCTTCCAGGA...AAGCTCATCAAGGCCTTTGCTGAGCAGATATTTTACACCGGCTTCATCCACTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR-3UTR CCA 90 bp CGAGTGGATGAAGCCGGTGTAAAATATCTGCTCAGCAAAGGCCTTGATGAGCTTCCCAGCCCACCTTGCTaGACTTGTCCCAGTGCACGC +
Preference number: 2 (lower is better)
Translates to: RVDEAGVKYLLSKGLDELPSPPC*TCPSAR
Trigger: GCGTGCACTGGGACAAGTCCAGCAAGGTGGGCTGGG...AAGCTCATCAAGGCCTTTGCTGAGCAGATATTTTACACCGGCTTCATCCACTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR CCA 72 bp GGCGCAGGAGGCTGGTGCCGTAGACACCCCGATACGTaGCGCCCGCCAGGCGGCTCCAGCCCCGGACAGCCC +
Preference number: 3 (lower is better)
Translates to: GAGGWCRRHPDT*RPPGGSSPGQP
Trigger: GGGCTGTCCGGGGCTGGAGCCGCCTGGCGGGCGCCACGTATCGGGGTGTCTACGGCACCAGCCTCCTGCGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR TCA 72 bp CTGCGTGCGCCCTCATGGCGGCGTCGTCCCGCAGGATaGTGGCCCGCCACAGCTGGCAGAGGGCTGCGCGGT +
Preference number: 3 (lower is better)
Translates to: LRAPSWRRRPAG*WPATAGRGLRG
Trigger: ACCGCGCAGCCCTCTGCCAGCTGTGGCGGGCCATCATCCTGCGGGACGACGCCGCCATGAGGGCGCACGCAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR GCA 72 bp TCTCCCAGACGACCTTGGCGTGGCGCAGGAGGCTGGTaGCGTAGACACCCCGATACGTGGCGCCCGCCAGGC +
Preference number: 3 (lower is better)
Translates to: SPRRPWRGAGGW*RRHPDTWRPPG
Trigger: GCCTGGCGGGCGCCACGTATCGGGGTGTCTACGGCACCAGCCTCCTGCGCCACGCCAAGGTCGTCTGGGAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR CCA 72 bp GCGGCGTCGTCCCGCAGGATGATGGCCCGCCACAGCTaGCAGAGGGCTGCGCGGTCCTTCTCCTCCAGGAAC +
Preference number: 3 (lower is better)
Translates to: AASSRRMMARHS*QRAARSFSSRN
Trigger: GTTCCTGGAGGAGAAGGACCGCGCAGCCCTCTGCCAGCTGTGGCGGGCCATCATCCTGCGGGACGACGCCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR-3UTR CAA 90 bp CCCCGCTTGAGGGCCCTGTCCTCTAGCACGCGCAGGGTCCGGGTATACTCGGGGTCCTGGAAGCCCCGCTaGAGGGCCCTGTCCTCTAGC +
Preference number: 3 (lower is better)
Translates to: PRLRALSSSTRRVRVYSGSWKPR*RALSSS
Trigger: GCTAGAGGACAGGGCCCTCAAGCGGGGCTTCCAGGA...CCCCGAGTATACCCGGACCCTGCGCGTGCTAGAGGACAGGGCCCTCAAGCGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000526833.2
ENST00000529654.5
ENST00000533715.2
ENST00000642585.1
ENST00000644530.1
ENST00000645307.1
3UTR-3UTR CAA 90 bp TCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCACCCTAGGTCTTCCTGGAAGCCCCGCTaGAGGGCCCTGTCCTCTAGC +
Preference number: 3 (lower is better)
Translates to: SAQGEKGPAGPGRLHPRSSWKPR*RALSSS
Trigger: GCTAGAGGACAGGGCCCTCAAGCGGGGCTTCCAGGA...AGACCTAGGGTGCAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR TCA 72 bp CGAGCCGCATCCTCCTCTTCTCCCGTGCCTCTGCCATaGCATAGCGGGCTCCGAGGAGCAGGGGCGCCCCCA +
Preference number: 3 (lower is better)
Translates to: RAASSSSPVPLP*HSGLRGAGAPP
Trigger: TGGGGGCGCCCCTGCTCCTCGGAGCCCGCTATGTCATGGCAGAGGCACGGGAGAAGAGGAGGATGCGGCTCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000533715.2
ENST00000644530.1
3UTR GCA 72 bp GGCGAACAGGAGGTAGTCTTGCACCCCCAGTGCGGCTaGGTGCGCCCTCATGGCGGCGTCGTCCCGCAGGAT +
Preference number: 3 (lower is better)
Translates to: GEQEVVLHPQCG*VRPHGGVVPQD
Trigger: ATCCTGCGGGACGACGCCGCCATGAGGGCGCACGCAGCCGCACTGGGGGTGCAAGACTACCTCCTGTTCGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR GCA 72 bp CAGCTTCACGTAGAGGCCCCCGTTGCTGATGGCCCCTaGCACCAGGGCATCAGCCGCCCGCTGGTGACACGC +
Preference number: 3 (lower is better)
Translates to: QLHVEAPVADGP*HQGISRPLVTR
Trigger: GCGTGTCACCAGCGGGCGGCTGATGCCCTGGTGGCAGGGGCCATCAGCAACGGGGGCCTCTACGTGAAGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000526833.2
ENST00000533715.2
ENST00000642585.1
ENST00000644530.1
3UTR CCA 72 bp GCATCTCCCAGACGACCTTGGCGTGGCGCAGGAGGCTaGTGCCGTAGACACCCCGATACGTGGCGCCCGCCA +
Preference number: 3 (lower is better)
Translates to: ASPRRPWRGAGG*CRRHPDTWRPP
Trigger: TGGCGGGCGCCACGTATCGGGGTGTCTACGGCACCAGCCTCCTGCGCCACGCCAAGGTCGTCTGGGAGATGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR-3UTR CAA 90 bp CACATCGTTGACCTTGCAGCCGGCGCAGAAGTCGGCAGTGAGCACGCGCTGGGGCCCACCTTGCTGGACTaGTCCCAGTGCACGCGGGGC +
Preference number: 3 (lower is better)
Translates to: HIVDLAAGAEVGSEHALGPTLLD*SQCTRG
Trigger: GCCCCGCGTGCACTGGGACAAGTCCAGCAAGGTGGG...CCCCAGCGCGTGCTCACTGCCGACTTCTGCGCCGGCTGCAAGGTCAACGATGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR GCA 72 bp GGAAGTGCGCCAGCTCCCGCGCACAGCGCTCTGCGTTaGGGCCCTCATTCTCGAAGTCCAGCTCCTGGGCCA +
Preference number: 3 (lower is better)
Translates to: GSAPAPAHSALR*GPHSRSPAPGP
Trigger: TGGCCCAGGAGCTGGACTTCGAGAATGAGGGCCGCAACGCAGAGCGCTGTGCGCGGGAGCTGGCGCACTTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR GCA 72 bp CCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTaGACCCTAGGTCTCCAGGTACTGGTAGAGCTCCTC +
Preference number: 3 (lower is better)
Translates to: PKVKRAPPALGG*TLGLQVLVELL
Trigger: GAGGAGCTCTACCAGTACCTGGAGACCTAGGGTGCAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR-3UTR CAA 90 bp CGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCACCCTAGGTGGCTGGCGGCAGCAATaGGCTGGTAGTCAAACTCCT +
Preference number: 3 (lower is better)
Translates to: RQPKVKRAPPALGGCTLGGWRQQ*AGSQTP
Trigger: AGGAGTTTGACTACCAGCCAATTGCTGCCGCCAGCC...ACCTAGGGTGCAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR-3UTR CAA 90 bp GTTGATAGCGCGCACGGTGTTGATGTTGCGCAGCACCAGCAGCATGGGCCGCGGCCCACCTTGCTGGACTaGTCCCAGTGCACGCGGGGC +
Preference number: 3 (lower is better)
Translates to: VDSAHGVDVAQHQQHGPRPTLLD*SQCTRG
Trigger: GCCCCGCGTGCACTGGGACAAGTCCAGCAAGGTGGG...CCGCGGCCCATGCTGCTGGTGCTGCGCAACATCAACACCGTGCGCGCTATCAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR-3UTR CAA 90 bp CTCATGGCGGCGTCGTCCCGCAGGATGATGGCCCGCCACAGCTGGCAGAGGGCTTTCCGCACCAGAACGTaGCCAGGATGTGGGTCCGAG +
Preference number: 3 (lower is better)
Translates to: LMAASSRRMMARHSWQRAFRTRT*PGCGSE
Trigger: CTCGGACCCACATCCTGGCAACGTTCTGGTGCGGAA...AGCCCTCTGCCAGCTGTGGCGGGCCATCATCCTGCGGGACGACGCCGCCATGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR-3UTR CAA 90 bp TCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCACCCTAGGTCTTTCCGCACCAGAACGTaGCCAGGATGTGGGTCCGAG +
Preference number: 3 (lower is better)
Translates to: SAQGEKGPAGPGRLHPRSFRTRT*PGCGSE
Trigger: CTCGGACCCACATCCTGGCAACGTTCTGGTGCGGAA...AGACCTAGGGTGCAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR-3UTR CAA 90 bp CACCCTAGGTCTCCAGGTACTGGTAGAGCTCCTCCGCTGGGGGCACGAGGCTCAGCGCCGAGGGCCACGTaGATAGCGCGCACGGTGTTG +
Preference number: 3 (lower is better)
Translates to: HPRSPGTGRAPPLGARGSAPRAT*IARTVL
Trigger: CAACACCGTGCGCGCTATCAACGTGGCCCTCGGCGC...TGAGCCTCGTGCCCCCAGCGGAGGAGCTCTACCAGTACCTGGAGACCTAGGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR GCA 72 bp GTAGGGGAAGTGCGCCAGCTCCCGCGCACAGCGCTCTaGGTTGCGGCCCTCATTCTCGAAGTCCAGCTCCTG +
Preference number: 3 (lower is better)
Translates to: VGEVRQLPRTAL*VAALILEVQLL
Trigger: CAGGAGCTGGACTTCGAGAATGAGGGCCGCAACGCAGAGCGCTGTGCGCGGGAGCTGGCGCACTTCCCCTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR TCA 72 bp CAAGGAACAACTCATCCACCTCCTGGAAGCCCCGCTTaGGGGCCCTGTCCTCTAGCACGCGCAGGGTCCGGG +
Preference number: 3 (lower is better)
Translates to: QGTTHPPPGSPA*GPCPLARAGSG
Trigger: CCCGGACCCTGCGCGTGCTAGAGGACAGGGCCCTCAAGCGGGGCTTCCAGGAGGTGGATGAGTTGTTCCTTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
3UTR GCA 72 bp ACAGCCACGCTGGTGCCATCGTGCAGCTTGGCTCTGTaGACCTGTGCCAGGCTGGCGGCAGCAATTGGCTGG +
Preference number: 3 (lower is better)
Translates to: TATLVPSCSLAL*TCARLAAAIGW
Trigger: CCAGCCAATTGCTGCCGCCAGCCTGGCACAGGTGCACAGAGCCAAGCTGCACGATGGCACCAGCGTGGCTGT
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
3UTR GCA 72 bp GCAGGCCGACCTTCAGAGACCTGCCAAAGCGCCCCATaGCATCCACCACGAGCCGCATCCTCCTCTTCTCCC +
Preference number: 3 (lower is better)
Translates to: AGRPSETCQSAP*HPPRAASSSSP
Trigger: GGGAGAAGAGGAGGATGCGGCTCGTGGTGGATGGCATGGGGCGCTTTGGCAGGTCTCTGAAGGTCGGCCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533715.2
ENST00000644530.1
3UTR CCA 72 bp ACCCTAGGTCTCCAGGTACTGGTAGAGCTCCTCCGCTaGGGGCACGAGGCTCAGGTGGACCAGAGCACGAGC +
Preference number: 3 (lower is better)
Translates to: TLGLQVLVELLR*GHEAQVDQSTS
Trigger: GCTCGTGCTCTGGTCCACCTGAGCCTCGTGCCCCCAGCGGAGGAGCTCTACCAGTACCTGGAGACCTAGGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR-3UTR CAA 90 bp GACCCAGCTGAAGCCAAAGCTGGGGTGCATGACCTCAACGAGCCGCAGCAGGAGTCCTGGAAGCCCCGCTaGAGGGCCCTGTCCTCTAGC +
Preference number: 3 (lower is better)
Translates to: DPAEAKAGVHDLNEPQQESWKPR*RALSSS
Trigger: GCTAGAGGACAGGGCCCTCAAGCGGGGCTTCCAGGA...CTCCTGCTGCGGCTCGTTGAGGTCATGCACCCCAGCTTTGGCTTCAGCTGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR-3UTR CAA 90 bp AGGTCTCCAGGTACTGGTAGAGCTCCTCCGCTGGGGGCACGAGGCTCAGGTGGAGCACAGCGCTCTGCGTaGCGGCCCTCATTCTCGAAG +
Preference number: 3 (lower is better)
Translates to: RSPGTGRAPPLGARGSGGAQRSA*RPSFSK
Trigger: CTTCGAGAATGAGGGCCGCAACGCAGAGCGCTGTGC...TCCACCTGAGCCTCGTGCCCCCAGCGGAGGAGCTCTACCAGTACCTGGAGACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR-3UTR CAA 90 bp CGTGGGGGAGGGCCTGGAAGTCCTCAAGGAACAACTCATCCACCTCCTGGAAGCTCCTGGAAGCCCCGCTaGAGGGCCCTGTCCTCTAGC +
Preference number: 3 (lower is better)
Translates to: RGGGPGSPQGTTHPPPGSSWKPR*RALSSS
Trigger: GCTAGAGGACAGGGCCCTCAAGCGGGGCTTCCAGGA...GCTTCCAGGAGGTGGATGAGTTGTTCCTTGAGGACTTCCAGGCCCTCCCCCACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
3UTR GCA 72 bp ATGTACTGCACCTTCACAGCCACGCTGGTGCCATCGTaGAGCTTGGCTCTGTGCACCTGTGCCAGGCTGGCG +
Preference number: 3 (lower is better)
Translates to: MYCTFTATLVPS*SLALCTCARLA
Trigger: CGCCAGCCTGGCACAGGTGCACAGAGCCAAGCTGCACGATGGCACCAGCGTGGCTGTGAAGGTGCAGTACAT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR CCA 72 bp ATGACCTCAACGAGCCGCAGCAGGAGCTCCAGGGTGTaGATGTCCCCATCAAAGCGGTCCCGCAGGTCGATG +
Preference number: 3 (lower is better)
Translates to: MTSTSRSRSSRV*MSPSKRSRRSM
Trigger: CATCGACCTGCGGGACCGCTTTGATGGGGACATCCACACCCTGGAGCTCCTGCTGCGGCTCGTTGAGGTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR-3UTR CAA 90 bp TCCTGGAAGAGCTCGTGGGGGAGGGCCTGGAAGTCCTCAAGGAACAACTCATCCGTGCCATCGTGCAGCTaGGCTCTGTGCACCTGTGCC +
Preference number: 3 (lower is better)
Translates to: SWKSSWGRAWKSSRNNSSVPSCS*ALCTCA
Trigger: GGCACAGGTGCACAGAGCCAAGCTGCACGATGGCAC...GGATGAGTTGTTCCTTGAGGACTTCCAGGCCCTCCCCCACGAGCTCTTCCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
3UTR-3UTR CAA 90 bp CCTGGAAGAGCTCGTGGGGGAGGGCCTGGAAGTCCTCAAGGAACAACTCATCCAGTGCCATCGTGCAGCTaGGCTCTGTGCACCTGTGCC +
Preference number: 3 (lower is better)
Translates to: PGRARGGGPGSPQGTTHPVPSCS*ALCTCA
Trigger: GGCACAGGTGCACAGAGCCAAGCTGCACGATGGCAC...TGGATGAGTTGTTCCTTGAGGACTTCCAGGCCCTCCCCCACGAGCTCTTCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
3UTR GCA 72 bp GCTGGTGCCATCGTGCAGCTTGGCTCTGTGCACCTGTaGCAGGCTGGCGGCAGCAATTGGCTGGTAGTCAAA +
Preference number: 3 (lower is better)
Translates to: AGAIVQLGSVHL*QAGGSNWLVVK
Trigger: TTTGACTACCAGCCAATTGCTGCCGCCAGCCTGGCACAGGTGCACAGAGCCAAGCTGCACGATGGCACCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
3UTR GCA 72 bp GCAGGTCGATGTACTGCACCTTCACAGCCACGCTGGTaGCATCGTGCAGCTTGGCTCTGTGCACCTGTGCCA +
Preference number: 3 (lower is better)
Translates to: AGRCTAPSQPRW*HRAAWLCAPVP
Trigger: TGGCACAGGTGCACAGAGCCAAGCTGCACGATGGCACCAGCGTGGCTGTGAAGGTGCAGTACATCGACCTGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR CCA 72 bp CATCGTGCAGCTTGGCTCTGTGCACCTGTGCCAGGCTaGCGGCAGCAATTGGCTGGTAGTCAAACTCCTGGA +
Preference number: 3 (lower is better)
Translates to: HRAAWLCAPVPG*RQQLAGSQTPG
Trigger: TCCAGGAGTTTGACTACCAGCCAATTGCTGCCGCCAGCCTGGCACAGGTGCACAGAGCCAAGCTGCACGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
3UTR GCA 72 bp GGCTGTTCTCTTCCACCCCTCGAAGGACAACATTGGTaGACCACCAGTAGTCCAGGGAGATCTGCAGGCCGA +
Preference number: 3 (lower is better)
Translates to: GCSLPPLEGQHW*TTSSPGRSAGR
Trigger: TCGGCCTGCAGATCTCCCTGGACTACTGGTGGTGCACCAATGTTGTCCTTCGAGGGGTGGAAGAGAACAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533715.2
ENST00000644530.1
3UTR CCA 72 bp CTGGGCTGTTCTCTTCCACCCCTCGAAGGACAACATTaGTGCACCACCAGTAGTCCAGGGAGATCTGCAGGC +
Preference number: 3 (lower is better)
Translates to: LGCSLPPLEGQH*CTTSSPGRSAG
Trigger: GCCTGCAGATCTCCCTGGACTACTGGTGGTGCACCAATGTTGTCCTTCGAGGGGTGGAAGAGAACAGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533715.2
ENST00000644530.1
3UTR CCA 72 bp GTCCGGGCCTTTCCGCACCAGAACGTTGCCAGGATGTaGGTCCGAGTGGATGAAGCCGGTGTAAAATATCTG +
Preference number: 3 (lower is better)
Translates to: VRAFPHQNVARM*VRVDEAGVKYL
Trigger: CAGATATTTTACACCGGCTTCATCCACTCGGACCCACATCCTGGCAACGTTCTGGTGCGGAAAGGCCCGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR TCA 72 bp GCACCAGAACGTTGCCAGGATGTGGGTCCGAGTGGATaGAGCCGGTGTAAAATATCTGCTCAGCAAAGGCCT +
Preference number: 3 (lower is better)
Translates to: APERCQDVGPSG*SRCKISAQQRP
Trigger: AGGCCTTTGCTGAGCAGATATTTTACACCGGCTTCATCCACTCGGACCCACATCCTGGCAACGTTCTGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR TCA 90 bp CGCCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCCGTCGTCCCGCAGGATaGTGGCCCGCCACAGCTGGC +
Preference number: 4 (lower is better)
Translates to: RHLRQPKVKRAPPALGGCRRPAG*WPATAG
Trigger: GCCAGCTGTGGCGGGCCATCATCCTGCGGGACGACG...GCAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CCA 90 bp CGCCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCCTGCGTGCGCCCTCATaGCGGCGTCGTCCCGCAGGA +
Preference number: 4 (lower is better)
Translates to: RHLRQPKVKRAPPALGGCLRAPS*RRRPAG
Trigger: TCCTGCGGGACGACGCCGCCATGAGGGCGCACGCAG...GCAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR TCA 90 bp CCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCACCGTCGTCCCGCAGGATaGTGGCCCGCCACAGCTGGC +
Preference number: 4 (lower is better)
Translates to: PPPSAQGEKGPAGPGRLHRRPAG*WPATAG
Trigger: GCCAGCTGTGGCGGGCCATCATCCTGCGGGACGACG...GTGCAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR TCA 90 bp CCGCCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGTCAGCCGCCCGCTGGTaGCACGCAGACATCACCTCC +
Preference number: 4 (lower is better)
Translates to: PPPPSAQGEKGPAGPGRLSAARW*HADITS
Trigger: GGAGGTGATGTCTGCGTGTCACCAGCGGGCGGCTGA...CAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR TCA 90 bp CCGCCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCCTGGAAGCCCCGCTTaGGGGCCCTGTCCTCTAGCA +
Preference number: 4 (lower is better)
Translates to: PPPPSAQGEKGPAGPGRLPGSPA*GPCPLA
Trigger: TGCTAGAGGACAGGGCCCTCAAGCGGGGCTTCCAGG...CAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR TCA 90 bp CGGCAGCTCCCTGAGCACCGCCATGACGGCCTCGAAGCGCTCGCGGGCCATGTCCGTCGTCCCGCAGGATaGTGGCCCGCCACAGCTGGC +
Preference number: 4 (lower is better)
Translates to: RQLPEHRHDGLEALAGHVRRPAG*WPATAG
Trigger: GCCAGCTGTGGCGGGCCATCATCCTGCGGGACGACG...GACATGGCCCGCGAGCGCTTCGAGGCCGTCATGGCGGTGCTCAGGGAGCTGCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR GCA 90 bp CCGCCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCCGCGCACAGCGCTCTaGGTTGCGGCCCTCATTCTC +
Preference number: 4 (lower is better)
Translates to: PPPPSAQGEKGPAGPGRLPRTAL*VAALIL
Trigger: GAGAATGAGGGCCGCAACGCAGAGCGCTGTGCGCGG...CAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR GCA 90 bp CCGCCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCTGGACTTGTCCCAGTaGACGCGGGGCACCACGACG +
Preference number: 4 (lower is better)
Translates to: PPPPSAQGEKGPAGPGRLLDLSQ*TRGTTT
Trigger: CGTCGTGGTGCCCCGCGTGCACTGGGACAAGTCCAG...CAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR GCA 90 bp CCGCCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCAGCTGGCAGAGGGCTaGGCGGTCCTTCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: PPPPSAQGEKGPAGPGRLQLAEG*AVLLLQ
Trigger: CTGGAGGAGAAGGACCGCGCAGCCCTCTGCCAGCTG...CAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR GCA 90 bp CCCGCCGGCCCTGGGCGGCTGCACCCTAGGTCTCCAGGTACTGGTAGAGCTCCTCACCCCCAGTGCGGCTaGGTGCGCCCTCATGGCGGC +
Preference number: 4 (lower is better)
Translates to: PAGPGRLHPRSPGTGRAPHPQCG*VRPHGG
Trigger: GCCGCCATGAGGGCGCACGCAGCCGCACTGGGGGTG...AGGAGCTCTACCAGTACCTGGAGACCTAGGGTGCAGCCGCCCAGGGCCGGCGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR GCA 90 bp CTCATGGCGGCGTCGTCCCGCAGGATGATGGCCCGCCACAGCTGGCAGAGGGCTGCAGGCCCAGCGCTGTaGCCACCCCAAGGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: LMAASSRRMMARHSWQRAAGPAL*PPQGPG
Trigger: GCCAGGCCCTTGGGGTGGGCACAGCGCTGGGCCTGC...AGCCCTCTGCCAGCTGTGGCGGGCCATCATCCTGCGGGACGACGCCGCCATGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CCA 90 bp CGGCAGCTCCCTGAGCACCGCCATGACGGCCTCGAAGCGCTCGCGGGCCATGTCAGACACCCCGATACGTaGCGCCCGCCAGGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: RQLPEHRHDGLEALAGHVRHPDT*RPPGGS
Trigger: GGAGCCGCCTGGCGGGCGCCACGTATCGGGGTGTCT...GACATGGCCCGCGAGCGCTTCGAGGCCGTCATGGCGGTGCTCAGGGAGCTGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CCA 90 bp CCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCACCAGACGACCTTGGCGTaGCGCAGGAGGCTGGTGCCG +
Preference number: 4 (lower is better)
Translates to: PPPSAQGEKGPAGPGRLHQTTLA*RRRLVP
Trigger: CGGCACCAGCCTCCTGCGCCACGCCAAGGTCGTCTG...GTGCAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CCA 90 bp CGCCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCGTAGAGCTCCTCCGCTaGGGGCACGAGGCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: RHLRQPKVKRAPPALGGCVELLR*GHEAQV
Trigger: CACCTGAGCCTCGTGCCCCCAGCGGAGGAGCTCTAC...GCAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR TCA 90 bp CCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCACCCCGTGCCTCTGCCATaGCATAGCGGGCTCCGAGGA +
Preference number: 4 (lower is better)
Translates to: PPPSAQGEKGPAGPGRLHPVPLP*HSGLRG
Trigger: TCCTCGGAGCCCGCTATGTCATGGCAGAGGCACGGG...GTGCAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR TCA 90 bp GTGGCGCAGGAGGCTGGTGCCGTAGACACCCCGATACGTGGCGCCCGCCAGGCGTCAGCCGCCCGCTGGTaGCACGCAGACATCACCTCC +
Preference number: 4 (lower is better)
Translates to: VAQEAGAVDTPIRGARQASAARW*HADITS
Trigger: GGAGGTGATGTCTGCGTGTCACCAGCGGGCGGCTGA...CGCCTGGCGGGCGCCACGTATCGGGGTGTCTACGGCACCAGCCTCCTGCGCCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR TCA 90 bp CCGCCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCGCAGAAGTCGGCAGTaGGCACGCGCTTGCTGGACT +
Preference number: 4 (lower is better)
Translates to: PPPPSAQGEKGPAGPGRLRRSRQ*ARACWT
Trigger: AGTCCAGCAAGCGCGTGCTCACTGCCGACTTCTGCG...CAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308860.11
ENST00000645968.2
CDS-3UTR TCA 90 bp CGCCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCTGGCCTCCACATCGTTaGCCTTGCAGCCGGCGCAGA +
Preference number: 4 (lower is better)
Translates to: RHLRQPKVKRAPPALGGCWPPHR*PCSRRR
Trigger: TCTGCGCCGGCTGCAAGGTCAACGATGTGGAGGCCA...GCAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR GCA 90 bp CCGCCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGGACGGCCAGGGCTTCTaGCTGCTGTGCAGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: PPPPSAQGEKGPAGPGRLDGQGF*LLCSRA
Trigger: TGCTCTGCTGCACAGCAGGCAGAAGCCCTGGCCGTC...CAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR GCA 90 bp GTGGCGCAGGAGGCTGGTGCCGTAGACACCCCGATACGTGGCGCCCGCCAGGCGGTTGCTGATGGCCCCTaGCACCAGGGCATCAGCCGC +
Preference number: 4 (lower is better)
Translates to: VAQEAGAVDTPIRGARQAVADGP*HQGISR
Trigger: GCGGCTGATGCCCTGGTGGCAGGGGCCATCAGCAAC...CGCCTGGCGGGCGCCACGTATCGGGGTGTCTACGGCACCAGCCTCCTGCGCCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR GCA 90 bp CCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCACGTTGCTGATGGCCCCTaGCACCAGGGCATCAGCCGC +
Preference number: 4 (lower is better)
Translates to: PPPSAQGEKGPAGPGRLHVADGP*HQGISR
Trigger: GCGGCTGATGCCCTGGTGGCAGGGGCCATCAGCAAC...GTGCAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR GCA 90 bp CCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCACCCGCGCACAGCGCTCTaGGTTGCGGCCCTCATTCTC +
Preference number: 4 (lower is better)
Translates to: PPPSAQGEKGPAGPGRLHPRTAL*VAALIL
Trigger: GAGAATGAGGGCCGCAACGCAGAGCGCTGTGCGCGG...GTGCAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR GCA 90 bp GTGGCGCAGGAGGCTGGTGCCGTAGACACCCCGATACGTGGCGCCCGCCAGGCGCAGCTGGCAGAGGGCTaGGCGGTCCTTCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: VAQEAGAVDTPIRGARQAQLAEG*AVLLLQ
Trigger: CTGGAGGAGAAGGACCGCGCAGCCCTCTGCCAGCTG...CGCCTGGCGGGCGCCACGTATCGGGGTGTCTACGGCACCAGCCTCCTGCGCCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR GCA 90 bp CCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCACAGGCGCACGGGGCGCTaGATGAGCATCTCGGCGAAC +
Preference number: 4 (lower is better)
Translates to: PPPSAQGEKGPAGPGRLHRRTGR*MSISAN
Trigger: GTTCGCCGAGATGCTCATGCAGCGCCCCGTGCGCCT...GTGCAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR GCA 90 bp CCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCACGGCGCAGGAGGCTGGTaGCGTAGACACCCCGATACG +
Preference number: 4 (lower is better)
Translates to: PPPSAQGEKGPAGPGRLHGAGGW*RRHPDT
Trigger: CGTATCGGGGTGTCTACGGCACCAGCCTCCTGCGCC...GTGCAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR GCA 90 bp CGGCAGCTCCCTGAGCACCGCCATGACGGCCTCGAAGCGCTCGCGGGCCATGTCCCGGCCCTGGGCGGCTaGACCCTAGGTCTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: RQLPEHRHDGLEALAGHVPALGG*TLGLQV
Trigger: TACCTGGAGACCTAGGGTGCAGCCGCCCAGGGCCGG...GACATGGCCCGCGAGCGCTTCGAGGCCGTCATGGCGGTGCTCAGGGAGCTGCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CCA 90 bp CGCCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCCCCCCACTACCGCGGTaGAGAGCACCTTCCTCCACA +
Preference number: 4 (lower is better)
Translates to: RHLRQPKVKRAPPALGGCPPLPR*RAPSST
Trigger: TGTGGAGGAAGGTGCTCTCCACCGCGGTAGTGGGGG...GCAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGGCG
71% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CCA 90 bp CCGCCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGGCACCTGTGCCAGGCTaGCGGCAGCAATTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: PPPPSAQGEKGPAGPGRLAPVPG*RQQLAG
Trigger: ACCAGCCAATTGCTGCCGCCAGCCTGGCACAGGTGC...CAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CCA 90 bp CCCGCCGGCCCTGGGCGGCTGCACCCTAGGTCTCCAGGTACTGGTAGAGCTCCTAGACACCCCGATACGTaGCGCCCGCCAGGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: PAGPGRLHPRSPGTGRAPRHPDT*RPPGGS
Trigger: GGAGCCGCCTGGCGGGCGCCACGTATCGGGGTGTCT...AGGAGCTCTACCAGTACCTGGAGACCTAGGGTGCAGCCGCCCAGGGCCGGCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR CAA 72 bp GGGGCGCCGAGGGCCACGTTGATAGCGCGCACGGTGTaGATGTTGCGCAGCACCAGCAGCATGGGCCGCGGC +
Preference number: 4 (lower is better)
Translates to: GAPRATLIARTV*MLRSTSSMGRG
Trigger: GCCGCGGCCCATGCTGCTGGTGCTGCGCAACATCAACACCGTGCGCGCTATCAACGTGGCCCTCGGCGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR TCA 90 bp CCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCACCGCAGAAGTCGGCAGTaGGCACGCGCTTGCTGGACT +
Preference number: 4 (lower is better)
Translates to: PPPSAQGEKGPAGPGRLHRRSRQ*ARACWT
Trigger: AGTCCAGCAAGCGCGTGCTCACTGCCGACTTCTGCG...GTGCAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308860.11
ENST00000645968.2
CDS-3UTR GCA 90 bp CCGCCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCTTCTCCCGTGCCTCTaGCATGACATAGCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: PPPPSAQGEKGPAGPGRLLLPCL*HDIAGS
Trigger: GGAGCCCGCTATGTCATGGCAGAGGCACGGGAGAAG...CAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR GCA 90 bp CCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCACTGCCAAAGCGCCCCATaGCATCCACCACGAGCCGCA +
Preference number: 4 (lower is better)
Translates to: PPPSAQGEKGPAGPGRLHCQSAP*HPPRAA
Trigger: TGCGGCTCGTGGTGGATGGCATGGGGCGCTTTGGCA...GTGCAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR GCA 90 bp CCGCCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGTCACAGCCACGCTGGTaGCATCGTGCAGCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: PPPPSAQGEKGPAGPGRLSQPRW*HRAAWL
Trigger: GAGCCAAGCTGCACGATGGCACCAGCGTGGCTGTGA...CAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR GCA 90 bp GGGGCACCACGACGTAGGGGAAGTGCGCCAGCTCCCGCGCACAGCGCTCTGCGTCTGGACTTGTCCCAGTaGACGCGGGGCACCACGACG +
Preference number: 4 (lower is better)
Translates to: GAPRRRGSAPAPAHSALRLDLSQ*TRGTTT
Trigger: CGTCGTGGTGCCCCGCGTGCACTGGGACAAGTCCAG...ACGCAGAGCGCTGTGCGCGGGAGCTGGCGCACTTCCCCTACGTCGTGGTGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR GCA 90 bp AAGCCCCGCTTGAGGGCCCTGTCCTCTAGCACGCGCAGGGTCCGGGTATACTCGCCCAGTGCGGCTGCGTaGGCCCTCATGGCGGCGTCG +
Preference number: 4 (lower is better)
Translates to: KPRLRALSSSTRRVRVYSPSAAA*ALMAAS
Trigger: CGACGCCGCCATGAGGGCGCACGCAGCCGCACTGGG...CGAGTATACCCGGACCCTGCGCGTGCTAGAGGACAGGGCCCTCAAGCGGGGCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR GCA 90 bp TGGAAGCCCCGCTTGAGGGCCCTGTCCTCTAGCACGCGCAGGGTCCGGGTATACCACCCCCAGTGCGGCTaGGTGCGCCCTCATGGCGGC +
Preference number: 4 (lower is better)
Translates to: WKPRLRALSSSTRRVRVYHPQCG*VRPHGG
Trigger: GCCGCCATGAGGGCGCACGCAGCCGCACTGGGGGTG...GTATACCCGGACCCTGCGCGTGCTAGAGGACAGGGCCCTCAAGCGGGGCTTCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CCA 90 bp CGCCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCGGGGCTGGAGAACCTTaGAGGAAGGCCCCTGACGTT +
Preference number: 4 (lower is better)
Translates to: RHLRQPKVKRAPPALGGCGAGEP*RKAPDV
Trigger: AACGTCAGGGGCCTTCCTCCAAGGTTCTCCAGCCCC...GCAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CCA 90 bp CGCCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCTCCTCCACAGGGGTGTaGGGCTGGAGAACCTTGGAG +
Preference number: 4 (lower is better)
Translates to: RHLRQPKVKRAPPALGGCSSTGV*GWRTLE
Trigger: CTCCAAGGTTCTCCAGCCCCACACCCCTGTGGAGGA...GCAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CCA 90 bp CCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCACCCCCCACTACCGCGGTaGAGAGCACCTTCCTCCACA +
Preference number: 4 (lower is better)
Translates to: PPPSAQGEKGPAGPGRLHPPLPR*RAPSST
Trigger: TGTGGAGGAAGGTGCTCTCCACCGCGGTAGTGGGGG...GTGCAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGG
70% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CCA 90 bp CCGCCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGAACTCATCCACCTCCTaGAAGCCCCGCTTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: PPPPSAQGEKGPAGPGRLNSSTS*KPRLRA
Trigger: GGCCCTCAAGCGGGGCTTCCAGGAGGTGGATGAGTT...CAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CCA 90 bp CCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCACTCCTGGAAGAGCTCGTaGGGGAGGGCCTGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: PPPSAQGEKGPAGPGRLHSWKSS*GRAWKS
Trigger: GGACTTCCAGGCCCTCCCCCACGAGCTCTTCCAGGA...GTGCAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CCA 90 bp CGCCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCGTCCCCTTCAGGTCCTaGAGGACCCAGCTGAAGCCA +
Preference number: 4 (lower is better)
Translates to: RHLRQPKVKRAPPALGGCVPFRS*RTQLKP
Trigger: TGGCTTCAGCTGGGTCCTCCAGGACCTGAAGGGGAC...GCAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CCA 90 bp CCGCCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCATTACACGGCCTCCTaGCCCAGCTGCTGTCACAGC +
Preference number: 4 (lower is better)
Translates to: PPPPSAQGEKGPAGPGRLHYTAS*PSCCHS
Trigger: GCTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATG...CAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR TCA 90 bp GGAGCACAGCCCCTGGCCCAGCTTCACGTAGAGGCCCCCGTTGCTGATGGCCCCCCCGTGCCTCTGCCATaGCATAGCGGGCTCCGAGGA +
Preference number: 4 (lower is better)
Translates to: GAQPLAQLHVEAPVADGPPVPLP*HSGLRG
Trigger: TCCTCGGAGCCCGCTATGTCATGGCAGAGGCACGGG...GGGGCCATCAGCAACGGGGGCCTCTACGTGAAGCTGGGCCAGGGGCTGTGCTCC
69% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000526833.2
ENST00000529654.5
ENST00000533715.2
ENST00000642585.1
ENST00000644530.1
ENST00000645307.1
CDS-3UTR TCA 90 bp CCCCGCTTGAGGGCCCTGTCCTCTAGCACGCGCAGGGTCCGGGTATACTCGGGGCCCGTGCCTCTGCCATaGCATAGCGGGCTCCGAGGA +
Preference number: 4 (lower is better)
Translates to: PRLRALSSSTRRVRVYSGPVPLP*HSGLRG
Trigger: TCCTCGGAGCCCGCTATGTCATGGCAGAGGCACGGG...CCCCGAGTATACCCGGACCCTGCGCGTGCTAGAGGACAGGGCCCTCAAGCGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000526833.2
ENST00000529654.5
ENST00000533715.2
ENST00000642585.1
ENST00000644530.1
ENST00000645307.1
CDS-3UTR TCA 90 bp CCCCGCTTGAGGGCCCTGTCCTCTAGCACGCGCAGGGTCCGGGTATACTCGGGGCCTGGAAGCCCCGCTTaGGGGCCCTGTCCTCTAGCA +
Preference number: 4 (lower is better)
Translates to: PRLRALSSSTRRVRVYSGPGSPA*GPCPLA
Trigger: TGCTAGAGGACAGGGCCCTCAAGCGGGGCTTCCAGG...CCCCGAGTATACCCGGACCCTGCGCGTGCTAGAGGACAGGGCCCTCAAGCGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000526833.2
ENST00000529654.5
ENST00000533715.2
ENST00000642585.1
ENST00000644530.1
ENST00000645307.1
CDS-3UTR TCA 90 bp GGAGCACAGCCCCTGGCCCAGCTTCACGTAGAGGCCCCCGTTGCTGATGGCCCCCCTGGAAGCCCCGCTTaGGGGCCCTGTCCTCTAGCA +
Preference number: 4 (lower is better)
Translates to: GAQPLAQLHVEAPVADGPPGSPA*GPCPLA
Trigger: TGCTAGAGGACAGGGCCCTCAAGCGGGGCTTCCAGG...GGGGCCATCAGCAACGGGGGCCTCTACGTGAAGCTGGGCCAGGGGCTGTGCTCC
69% GC, longest homopolymer 6 nt, total homopolymer stretches 23 nt.
Matches the following 6 transcripts:
ENST00000526833.2
ENST00000529654.5
ENST00000533715.2
ENST00000642585.1
ENST00000644530.1
ENST00000645307.1
CDS-3UTR GCA 90 bp CGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCACCCTAGGTGACGGCCAGGGCTTCTaGCTGCTGTGCAGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: RQPKVKRAPPALGGCTLGDGQGF*LLCSRA
Trigger: TGCTCTGCTGCACAGCAGGCAGAAGCCCTGGCCGTC...ACCTAGGGTGCAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR GCA 90 bp CCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCACCTTCTCCCGTGCCTCTaGCATGACATAGCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: PPPSAQGEKGPAGPGRLHLLPCL*HDIAGS
Trigger: GGAGCCCGCTATGTCATGGCAGAGGCACGGGAGAAG...GTGCAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR GCA 90 bp GGAGCACAGCCCCTGGCCCAGCTTCACGTAGAGGCCCCCGTTGCTGATGGCCCCGTTGCTGATGGCCCCTaGCACCAGGGCATCAGCCGC +
Preference number: 4 (lower is better)
Translates to: GAQPLAQLHVEAPVADGPVADGP*HQGISR
Trigger: GCGGCTGATGCCCTGGTGGCAGGGGCCATCAGCAAC...GGGGCCATCAGCAACGGGGGCCTCTACGTGAAGCTGGGCCAGGGGCTGTGCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000526833.2
ENST00000529654.5
ENST00000533715.2
ENST00000642585.1
ENST00000644530.1
ENST00000645307.1
CDS-3UTR GCA 90 bp CCGCCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCACAGCGCTCTGCGTTaGGGCCCTCATTCTCGAAGT +
Preference number: 4 (lower is better)
Translates to: PPPPSAQGEKGPAGPGRLHSALR*GPHSRS
Trigger: ACTTCGAGAATGAGGGCCGCAACGCAGAGCGCTGTG...CAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR GCA 90 bp CGCCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCTCCGCACCAGAACGTTaGCAGGATGTGGGTCCGAGT +
Preference number: 4 (lower is better)
Translates to: RHLRQPKVKRAPPALGGCSAPER*QDVGPS
Trigger: ACTCGGACCCACATCCTGGCAACGTTCTGGTGCGGA...GCAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR GCA 90 bp GTTGATAGCGCGCACGGTGTTGATGTTGCGCAGCACCAGCAGCATGGGCCGCGGCCCAGTGCGGCTGCGTaGGCCCTCATGGCGGCGTCG +
Preference number: 4 (lower is better)
Translates to: VDSAHGVDVAQHQQHGPRPSAAA*ALMAAS
Trigger: CGACGCCGCCATGAGGGCGCACGCAGCCGCACTGGG...CCGCGGCCCATGCTGCTGGTGCTGCGCAACATCAACACCGTGCGCGCTATCAAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CCA 90 bp CCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCACCCTTCACAGCCACGCTaGTGCCATCGTGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: PPPSAQGEKGPAGPGRLHPSQPR*CHRAAW
Trigger: CCAAGCTGCACGATGGCACCAGCGTGGCTGTGAAGG...GTGCAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CCA 90 bp CCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCACCATTACACGGCCTCCTaGCCCAGCTGCTGTCACAGC +
Preference number: 4 (lower is better)
Translates to: PPPSAQGEKGPAGPGRLHHYTAS*PSCCHS
Trigger: GCTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATG...GTGCAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CCA 90 bp GGGGCACCACGACGTAGGGGAAGTGCGCCAGCTCCCGCGCACAGCGCTCTGCGTCCCAGCCCACCTTGCTaGACTTGTCCCAGTGCACGC +
Preference number: 4 (lower is better)
Translates to: GAPRRRGSAPAPAHSALRPSPPC*TCPSAR
Trigger: GCGTGCACTGGGACAAGTCCAGCAAGGTGGGCTGGG...ACGCAGAGCGCTGTGCGCGGGAGCTGGCGCACTTCCCCTACGTCGTGGTGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR CAA 72 bp GGGAAGTGCGCCAGCTCCCGCGCACAGCGCTCTGCGTaGCGGCCCTCATTCTCGAAGTCCAGCTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GKCASSRAQRSA*RPSFSKSSSWA
Trigger: GGCCCAGGAGCTGGACTTCGAGAATGAGGGCCGCAACGCAGAGCGCTGTGCGCGGGAGCTGGCGCACTTCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR GCA 90 bp CCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCACCGACCTTCAGAGACCTaGCAAAGCGCCCCATGCCAT +
Preference number: 4 (lower is better)
Translates to: PPPSAQGEKGPAGPGRLHRPSET*QSAPCH
Trigger: ATGGCATGGGGCGCTTTGGCAGGTCTCTGAAGGTCG...GTGCAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR GCA 90 bp GCTGATGGCCCCTGCCACCAGGGCATCAGCCGCCCGCTGGTGACACGCAGACATGTTGCTGATGGCCCCTaGCACCAGGGCATCAGCCGC +
Preference number: 4 (lower is better)
Translates to: ADGPCHQGISRPLVTRRHVADGP*HQGISR
Trigger: GCGGCTGATGCCCTGGTGGCAGGGGCCATCAGCAAC...ATGTCTGCGTGTCACCAGCGGGCGGCTGATGCCCTGGTGGCAGGGGCCATCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526833.2
ENST00000533715.2
ENST00000642585.1
ENST00000644530.1
CDS-3UTR GCA 90 bp CCCCGCTTGAGGGCCCTGTCCTCTAGCACGCGCAGGGTCCGGGTATACTCGGGGTGCAGCTTGGCTCTGTaGACCTGTGCCAGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: PRLRALSSSTRRVRVYSGCSLAL*TCARLA
Trigger: CGCCAGCCTGGCACAGGTGCACAGAGCCAAGCTGCA...CCCCGAGTATACCCGGACCCTGCGCGTGCTAGAGGACAGGGCCCTCAAGCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
CDS-3UTR GCA 90 bp AGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACAGCCCCCCCAGTGCGGCTGCGTaGGCCCTCATGGCGGCGTCG +
Preference number: 4 (lower is better)
Translates to: RGVCGHYTASWPSCCHSPPSAAA*ALMAAS
Trigger: CGACGCCGCCATGAGGGCGCACGCAGCCGCACTGGG...GGGGCTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCT
68% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR GCA 90 bp AGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACAGCCCCCACCCCCAGTGCGGCTaGGTGCGCCCTCATGGCGGC +
Preference number: 4 (lower is better)
Translates to: RGVCGHYTASWPSCCHSPHPQCG*VRPHGG
Trigger: GCCGCCATGAGGGCGCACGCAGCCGCACTGGGGGTG...GGGGCTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR GCA 90 bp ACGCTGGTGCCATCGTGCAGCTTGGCTCTGTGCACCTGTGCCAGGCTGGCGGCATCGCGGCTCAGTAGGTaGGAGCCCCACAGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: TLVPSCSLALCTCARLAASRLSR*EPHSCP
Trigger: GGGGCAGCTGTGGGGCTCGCACCTACTGAGCCGCGA...TGCCGCCAGCCTGGCACAGGTGCACAGAGCCAAGCTGCACGATGGCACCAGCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR GCA 90 bp CAGCCACGCTGGTGCCATCGTGCAGCTTGGCTCTGTGCACCTGTGCCAGGCTGGCCGGCCCTGGGCGGCTaGACCCTAGGTCTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: QPRWCHRAAWLCAPVPGWPALGG*TLGLQV
Trigger: TACCTGGAGACCTAGGGTGCAGCCGCCCAGGGCCGG...CCAGCCTGGCACAGGTGCACAGAGCCAAGCTGCACGATGGCACCAGCGTGGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CCA 90 bp CGGCAGCTCCCTGAGCACCGCCATGACGGCCTCGAAGCGCTCGCGGGCCATGTCAACTCATCCACCTCCTaGAAGCCCCGCTTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: RQLPEHRHDGLEALAGHVNSSTS*KPRLRA
Trigger: GGCCCTCAAGCGGGGCTTCCAGGAGGTGGATGAGTT...GACATGGCCCGCGAGCGCTTCGAGGCCGTCATGGCGGTGCTCAGGGAGCTGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CCA 90 bp CCGCCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGGCTGGCGGCAGCAATTaGCTGGTAGTCAAACTCCTG +
Preference number: 4 (lower is better)
Translates to: PPPPSAQGEKGPAGPGRLAGGSN*LVVKLL
Trigger: CAGGAGTTTGACTACCAGCCAATTGCTGCCGCCAGC...CAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CCA 90 bp GAGGTAGTCTTGCACCCCCAGTGCGGCTGCGTGCGCCCTCATGGCGGCGTCGTCGCACCTGTGCCAGGCTaGCGGCAGCAATTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: EVVLHPQCGCVRPHGGVVAPVPG*RQQLAG
Trigger: ACCAGCCAATTGCTGCCGCCAGCCTGGCACAGGTGC...GACGACGCCGCCATGAGGGCGCACGCAGCCGCACTGGGGGTGCAAGACTACCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CCA 90 bp CCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCACTGCCATCGTGCAGCTTaGCTCTGTGCACCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: PPPSAQGEKGPAGPGRLHCHRAA*LCAPVP
Trigger: TGGCACAGGTGCACAGAGCCAAGCTGCACGATGGCA...GTGCAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CCA 90 bp CGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCACCCTAGGTCCTTCACAGCCACGCTaGTGCCATCGTGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: RQPKVKRAPPALGGCTLGPSQPR*CHRAAW
Trigger: CCAAGCTGCACGATGGCACCAGCGTGGCTGTGAAGG...ACCTAGGGTGCAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CCA 90 bp CCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCACAGGAGCTCCAGGGTGTaGATGTCCCCATCAAAGCGG +
Preference number: 4 (lower is better)
Translates to: PPPSAQGEKGPAGPGRLHRSSRV*MSPSKR
Trigger: CCGCTTTGATGGGGACATCCACACCCTGGAGCTCCT...GTGCAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CCA 90 bp CCGCCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGAACGTTGCCAGGATGTaGGTCCGAGTGGATGAAGCC +
Preference number: 4 (lower is better)
Translates to: PPPPSAQGEKGPAGPGRLNVARM*VRVDEA
Trigger: GGCTTCATCCACTCGGACCCACATCCTGGCAACGTT...CAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CCA 90 bp CAGGATGATGGCCCGCCACAGCTGGCAGAGGGCTGCGCGGTCCTTCTCCTCCAGGGCACGAGGCTCAGGTaGACCAGAGCACGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: QDDGPPQLAEGCAVLLLQGTRLR*TRARAR
Trigger: CCTGGCTCGTGCTCTGGTCCACCTGAGCCTCGTGCC...CTGGAGGAGAAGGACCGCGCAGCCCTCTGCCAGCTGTGGCGGGCCATCATCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR TCA 90 bp CTCATGGCGGCGTCGTCCCGCAGGATGATGGCCCGCCACAGCTGGCAGAGGGCTCAAAGCTGGGGTGCATaGCCTCAACGAGCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: LMAASSRRMMARHSWQRAQSWGA*PQRAAA
Trigger: TGCTGCGGCTCGTTGAGGTCATGCACCCCAGCTTTG...AGCCCTCTGCCAGCTGTGGCGGGCCATCATCCTGCGGGACGACGCCGCCATGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR GCA 90 bp GGAGCACAGCCCCTGGCCCAGCTTCACGTAGAGGCCCCCGTTGCTGATGGCCCCCTTCTCCCGTGCCTCTaGCATGACATAGCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: GAQPLAQLHVEAPVADGPLLPCL*HDIAGS
Trigger: GGAGCCCGCTATGTCATGGCAGAGGCACGGGAGAAG...GGGGCCATCAGCAACGGGGGCCTCTACGTGAAGCTGGGCCAGGGGCTGTGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000526833.2
ENST00000529654.5
ENST00000533715.2
ENST00000642585.1
ENST00000644530.1
ENST00000645307.1
CDS-3UTR GCA 90 bp TCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCACCCTAGGTCTCTTCTCCCGTGCCTCTaGCATGACATAGCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: SAQGEKGPAGPGRLHPRSLLPCL*HDIAGS
Trigger: GGAGCCCGCTATGTCATGGCAGAGGCACGGGAGAAG...AGACCTAGGGTGCAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR GCA 90 bp CCGCCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGGAAGGACAACATTGGTaGACCACCAGTAGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: PPPPSAQGEKGPAGPGRLEGQHW*TTSSPG
Trigger: CCCTGGACTACTGGTGGTGCACCAATGTTGTCCTTC...CAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR GCA 90 bp CACGCTGGTGCCATCGTGCAGCTTGGCTCTGTGCACCTGTGCCAGGCTGGCGGCTGCAGCTTGGCTCTGTaGACCTGTGCCAGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: HAGAIVQLGSVHLCQAGGCSLAL*TCARLA
Trigger: CGCCAGCCTGGCACAGGTGCACAGAGCCAAGCTGCA...GCCGCCAGCCTGGCACAGGTGCACAGAGCCAAGCTGCACGATGGCACCAGCGTG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
CDS-3UTR GCA 90 bp CCCGCCGGCCCTGGGCGGCTGCACCCTAGGTCTCCAGGTACTGGTAGAGCTCCTTCACAGCCACGCTGGTaGCATCGTGCAGCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: PAGPGRLHPRSPGTGRAPSQPRW*HRAAWL
Trigger: GAGCCAAGCTGCACGATGGCACCAGCGTGGCTGTGA...AGGAGCTCTACCAGTACCTGGAGACCTAGGGTGCAGCCGCCCAGGGCCGGCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR GCA 90 bp AGCCACGCTGGTGCCATCGTGCAGCTTGGCTCTGTGCACCTGTGCCAGGCTGGCCCGCGCACAGCGCTCTaGGTTGCGGCCCTCATTCTC +
Preference number: 4 (lower is better)
Translates to: SHAGAIVQLGSVHLCQAGPRTAL*VAALIL
Trigger: GAGAATGAGGGCCGCAACGCAGAGCGCTGTGCGCGG...GCCAGCCTGGCACAGGTGCACAGAGCCAAGCTGCACGATGGCACCAGCGTGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR GCA 90 bp AAGCCCCGCTTGAGGGCCCTGTCCTCTAGCACGCGCAGGGTCCGGGTATACTCGCTGGACTTGTCCCAGTaGACGCGGGGCACCACGACG +
Preference number: 4 (lower is better)
Translates to: KPRLRALSSSTRRVRVYSLDLSQ*TRGTTT
Trigger: CGTCGTGGTGCCCCGCGTGCACTGGGACAAGTCCAG...CGAGTATACCCGGACCCTGCGCGTGCTAGAGGACAGGGCCCTCAAGCGGGGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR GCA 90 bp CCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCACTGCTATGTCATGCACTaGCAGCCCCTGGCTCCTGAT +
Preference number: 4 (lower is better)
Translates to: PPPSAQGEKGPAGPGRLHCYVMH*QPLAPD
Trigger: ATCAGGAGCCAGGGGCTGGCAGTGCATGACATAGCA...GTGCAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR GCA 90 bp CGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCACCCTAGGTTCCGCACCAGAACGTTaGCAGGATGTGGGTCCGAGT +
Preference number: 4 (lower is better)
Translates to: RQPKVKRAPPALGGCTLGSAPER*QDVGPS
Trigger: ACTCGGACCCACATCCTGGCAACGTTCTGGTGCGGA...ACCTAGGGTGCAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR GCA 90 bp AGCCACGCTGGTGCCATCGTGCAGCTTGGCTCTGTGCACCTGTGCCAGGCTGGCGTCTTGCACCCCCAGTaGGGCTGCGTGCGCCCTCAT +
Preference number: 4 (lower is better)
Translates to: SHAGAIVQLGSVHLCQAGVLHPQ*GCVRPH
Trigger: ATGAGGGCGCACGCAGCCGCACTGGGGGTGCAAGAC...GCCAGCCTGGCACAGGTGCACAGAGCCAAGCTGCACGATGGCACCAGCGTGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR GCA 90 bp CCCCGCTTGAGGGCCCTGTCCTCTAGCACGCGCAGGGTCCGGGTATACTCGGGGTGGGGAGGCAAGGTCTaGCAAAGCGCCCCATGCCAT +
Preference number: 4 (lower is better)
Translates to: PRLRALSSSTRRVRVYSGWGGKV*QSAPCH
Trigger: ATGGCATGGGGCGCTTTGGCAGACCTTGCCTCCCCA...CCCCGAGTATACCCGGACCCTGCGCGTGCTAGAGGACAGGGCCCTCAAGCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000526833.2
ENST00000642585.1
CDS-3UTR CCA 90 bp CCCGCCGGCCCTGGGCGGCTGCACCCTAGGTCTCCAGGTACTGGTAGAGCTCCTGGGGCTGGAGAACCTTaGAGGAAGGCCCCTGACGTT +
Preference number: 4 (lower is better)
Translates to: PAGPGRLHPRSPGTGRAPGAGEP*RKAPDV
Trigger: AACGTCAGGGGCCTTCCTCCAAGGTTCTCCAGCCCC...AGGAGCTCTACCAGTACCTGGAGACCTAGGGTGCAGCCGCCCAGGGCCGGCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CCA 90 bp CCCGCCGGCCCTGGGCGGCTGCACCCTAGGTCTCCAGGTACTGGTAGAGCTCCTTCCTCCACAGGGGTGTaGGGCTGGAGAACCTTGGAG +
Preference number: 4 (lower is better)
Translates to: PAGPGRLHPRSPGTGRAPSSTGV*GWRTLE
Trigger: CTCCAAGGTTCTCCAGCCCCACACCCCTGTGGAGGA...AGGAGCTCTACCAGTACCTGGAGACCTAGGGTGCAGCCGCCCAGGGCCGGCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CCA 90 bp CAGGATGATGGCCCGCCACAGCTGGCAGAGGGCTGCGCGGTCCTTCTCCTCCAGTCCTGGAAGAGCTCGTaGGGGAGGGCCTGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: QDDGPPQLAEGCAVLLLQSWKSS*GRAWKS
Trigger: GGACTTCCAGGCCCTCCCCCACGAGCTCTTCCAGGA...CTGGAGGAGAAGGACCGCGCAGCCCTCTGCCAGCTGTGGCGGGCCATCATCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CCA 90 bp CCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCACGCTGGCGGCAGCAATTaGCTGGTAGTCAAACTCCTG +
Preference number: 4 (lower is better)
Translates to: PPPSAQGEKGPAGPGRLHAGGSN*LVVKLL
Trigger: CAGGAGTTTGACTACCAGCCAATTGCTGCCGCCAGC...GTGCAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CCA 90 bp AGCCACGCTGGTGCCATCGTGCAGCTTGGCTCTGTGCACCTGTGCCAGGCTGGCTCTCCCAGACGACCTTaGCGTGGCGCAGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: SHAGAIVQLGSVHLCQAGSPRRP*RGAGGW
Trigger: CCAGCCTCCTGCGCCACGCCAAGGTCGTCTGGGAGA...GCCAGCCTGGCACAGGTGCACAGAGCCAAGCTGCACGATGGCACCAGCGTGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CCA 90 bp GGAGCACAGCCCCTGGCCCAGCTTCACGTAGAGGCCCCCGTTGCTGATGGCCCCCATTACACGGCCTCCTaGCCCAGCTGCTGTCACAGC +
Preference number: 4 (lower is better)
Translates to: GAQPLAQLHVEAPVADGPHYTAS*PSCCHS
Trigger: GCTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATG...GGGGCCATCAGCAACGGGGGCCTCTACGTGAAGCTGGGCCAGGGGCTGTGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR TCA 90 bp GAGGTAGTCTTGCACCCCCAGTGCGGCTGCGTGCGCCCTCATGGCGGCGTCGTCAGAGCAGAGTGGAAATaGCAGAGCTGCACCGGTCGC +
Preference number: 4 (lower is better)
Translates to: EVVLHPQCGCVRPHGGVVRAEWK*QSCTGR
Trigger: GCGACCGGTGCAGCTCTGTCATTTCCACTCTGCTCT...GACGACGCCGCCATGAGGGCGCACGCAGCCGCACTGGGGGTGCAAGACTACCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR TCA 90 bp CGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCACCCTAGGTGCGCCACTTCAAACTTaGGCATCTCCCAGACGACCT +
Preference number: 4 (lower is better)
Translates to: RQPKVKRAPPALGGCTLGAPLQT*ASPRRP
Trigger: AGGTCGTCTGGGAGATGCTCAAGTTTGAAGTGGCGC...ACCTAGGGTGCAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR GCA 90 bp GGAGCACAGCCCCTGGCCCAGCTTCACGTAGAGGCCCCCGTTGCTGATGGCCCCCGACCTTCAGAGACCTaGCAAAGCGCCCCATGCCAT +
Preference number: 4 (lower is better)
Translates to: GAQPLAQLHVEAPVADGPRPSET*QSAPCH
Trigger: ATGGCATGGGGCGCTTTGGCAGGTCTCTGAAGGTCG...GGGGCCATCAGCAACGGGGGCCTCTACGTGAAGCTGGGCCAGGGGCTGTGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
CDS-3UTR GCA 90 bp TGGAAGCCCCGCTTGAGGGCCCTGTCCTCTAGCACGCGCAGGGTCCGGGTATACTGCAGCTTGGCTCTGTaGACCTGTGCCAGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: WKPRLRALSSSTRRVRVYCSLAL*TCARLA
Trigger: CGCCAGCCTGGCACAGGTGCACAGAGCCAAGCTGCA...GTATACCCGGACCCTGCGCGTGCTAGAGGACAGGGCCCTCAAGCGGGGCTTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
CDS-3UTR GCA 90 bp TGCTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACCCCAGTGCGGCTGCGTaGGCCCTCATGGCGGCGTCG +
Preference number: 4 (lower is better)
Translates to: CLRGVCGHYTASWPSCCHPSAAA*ALMAAS
Trigger: CGACGCCGCCATGAGGGCGCACGCAGCCGCACTGGG...GTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR GCA 90 bp CTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACAGCACCCCCAGTGCGGCTaGGTGCGCCCTCATGGCGGC +
Preference number: 4 (lower is better)
Translates to: LERSVWSLHGLLAQLLSQHPQCG*VRPHGG
Trigger: GCCGCCATGAGGGCGCACGCAGCCGCACTGGGGGTG...CTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR GCA 90 bp CCAAAGCTGGGGTGCATGACCTCAACGAGCCGCAGCAGGAGCTCCAGGGTGTGGAGGCGCACGGGGCGCTaGATGAGCATCTCGGCGAAC +
Preference number: 4 (lower is better)
Translates to: PKLGCMTSTSRSRSSRVWRRTGR*MSISAN
Trigger: GTTCGCCGAGATGCTCATGCAGCGCCCCGTGCGCCT...CCACACCCTGGAGCTCCTGCTGCGGCTCGTTGAGGTCATGCACCCCAGCTTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR GCA 90 bp CACGCTGGTGCCATCGTGCAGCTTGGCTCTGTGCACCTGTGCCAGGCTGGCGGCTGGCCCAGCCCACCTTaGTGGACTTGTCCCAGTGCA +
Preference number: 4 (lower is better)
Translates to: HAGAIVQLGSVHLCQAGGWPSPP*WTCPSA
Trigger: TGCACTGGGACAAGTCCAGCAAGGTGGGCTGGGCCA...GCCGCCAGCCTGGCACAGGTGCACAGAGCCAAGCTGCACGATGGCACCAGCGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR GCA 90 bp CTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACAGGCAGGCCCAGCGCTGTaGCCACCCCAAGGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: LERSVWSLHGLLAQLLSQAGPAL*PPQGPG
Trigger: GCCAGGCCCTTGGGGTGGGCACAGCGCTGGGCCTGC...CTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CCA 90 bp ACGCTGGTGCCATCGTGCAGCTTGGCTCTGTGCACCTGTGCCAGGCTGGCGGCATCCTGGAAGAGCTCGTaGGGGAGGGCCTGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: TLVPSCSLALCTCARLAASWKSS*GRAWKS
Trigger: GGACTTCCAGGCCCTCCCCCACGAGCTCTTCCAGGA...TGCCGCCAGCCTGGCACAGGTGCACAGAGCCAAGCTGCACGATGGCACCAGCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
CDS-3UTR CCA 90 bp AGGCCGACCTTCAGAGACCTGCCAAAGCGCCCCATGCCATCCACCACGAGCCGCGCACCTGTGCCAGGCTaGCGGCAGCAATTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: RPTFRDLPKRPMPSTTSRAPVPG*RQQLAG
Trigger: ACCAGCCAATTGCTGCCGCCAGCCTGGCACAGGTGC...GCGGCTCGTGGTGGATGGCATGGGGCGCTTTGGCAGGTCTCTGAAGGTCGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533715.2
ENST00000644530.1
CDS-3UTR CCA 90 bp CCCCGCTTGAGGGCCCTGTCCTCTAGCACGCGCAGGGTCCGGGTATACTCGGGGAGGAGCTCCAGGGTGTaGATGTCCCCATCAAAGCGG +
Preference number: 4 (lower is better)
Translates to: PRLRALSSSTRRVRVYSGRSSRV*MSPSKR
Trigger: CCGCTTTGATGGGGACATCCACACCCTGGAGCTCCT...CCCCGAGTATACCCGGACCCTGCGCGTGCTAGAGGACAGGGCCCTCAAGCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CCA 90 bp CCAGTGCACGCGGGGCACCACGACGTAGGGGAAGTGCGCCAGCTCCCGCGCACAAACGTTGCCAGGATGTaGGTCCGAGTGGATGAAGCC +
Preference number: 4 (lower is better)
Translates to: PVHAGHHDVGEVRQLPRTNVARM*VRVDEA
Trigger: GGCTTCATCCACTCGGACCCACATCCTGGCAACGTT...TGTGCGCGGGAGCTGGCGCACTTCCCCTACGTCGTGGTGCCCCGCGTGCACTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CCA 90 bp CACAGCCACGCTGGTGCCATCGTGCAGCTTGGCTCTGTGCACCTGTGCCAGGCTGGCACGAGGCTCAGGTaGACCAGAGCACGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: HSHAGAIVQLGSVHLCQAGTRLR*TRARAR
Trigger: CCTGGCTCGTGCTCTGGTCCACCTGAGCCTCGTGCC...AGCCTGGCACAGGTGCACAGAGCCAAGCTGCACGATGGCACCAGCGTGGCTGTG
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CCA 90 bp CCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCACCTTGAGAGGAGTGTGTaGTCATTACACGGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: PPPSAQGEKGPAGPGRLHLERSV*SLHGLL
Trigger: CAGGAGGCCGTGTAATGACCACACACTCCTCTCAAG...GTGCAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR TCA 90 bp CATGCCATCCACCACGAGCCGCATCCTCCTCTTCTCCCGTGCCTCTGCCATGACCCCGTGCCTCTGCCATaGCATAGCGGGCTCCGAGGA +
Preference number: 4 (lower is better)
Translates to: HAIHHEPHPPLLPCLCHDPVPLP*HSGLRG
Trigger: TCCTCGGAGCCCGCTATGTCATGGCAGAGGCACGGG...GTCATGGCAGAGGCACGGGAGAAGAGGAGGATGCGGCTCGTGGTGGATGGCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533715.2
ENST00000644530.1
CDS-3UTR TCA 90 bp ACCTTCACAGCCACGCTGGTGCCATCGTGCAGCTTGGCTCTGTGCACCTGTGCCCCTGGAAGCCCCGCTTaGGGGCCCTGTCCTCTAGCA +
Preference number: 4 (lower is better)
Translates to: TFTATLVPSCSLALCTCAPGSPA*GPCPLA
Trigger: TGCTAGAGGACAGGGCCCTCAAGCGGGGCTTCCAGG...GGCACAGGTGCACAGAGCCAAGCTGCACGATGGCACCAGCGTGGCTGTGAAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
CDS-3UTR TCA 90 bp TTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACAGCCGTCGTCCCGCAGGATaGTGGCCCGCCACAGCTGGC +
Preference number: 4 (lower is better)
Translates to: LRGVCGHYTASWPSCCHSRRPAG*WPATAG
Trigger: GCCAGCTGTGGCGGGCCATCATCCTGCGGGACGACG...GCTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR TCA 90 bp AGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACAGCCCCGCACGGGGCGCTGCATaGGCATCTCGGCGAACAGGA +
Preference number: 4 (lower is better)
Translates to: RGVCGHYTASWPSCCHSPARGAA*ASRRTG
Trigger: TCCTGTTCGCCGAGATGCTCATGCAGCGCCCCGTGC...GGGGCTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR GCA 90 bp GTTGATAGCGCGCACGGTGTTGATGTTGCGCAGCACCAGCAGCATGGGCCGCGGCACATCTCCGACCACTaGTCCGCTCTTCTCCCGCCC +
Preference number: 4 (lower is better)
Translates to: VDSAHGVDVAQHQQHGPRHISDH*SALLPP
Trigger: GGGCGGGAGAAGAGCGGAGCAGTGGTCGGAGATGTG...CCGCGGCCCATGCTGCTGGTGCTGCGCAACATCAACACCGTGCGCGCTATCAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR GCA 90 bp CCCTGCCACCAGGGCATCAGCCGCCCGCTGGTGACACGCAGACATCACCTCCAACTTCTCCCGTGCCTCTaGCATGACATAGCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: PCHQGISRPLVTRRHHLQLLPCL*HDIAGS
Trigger: GGAGCCCGCTATGTCATGGCAGAGGCACGGGAGAAG...TTGGAGGTGATGTCTGCGTGTCACCAGCGGGCGGCTGATGCCCTGGTGGCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526833.2
ENST00000533715.2
ENST00000642585.1
ENST00000644530.1
CDS-3UTR GCA 90 bp CAGCCGCCCGCTGGTGACACGCAGACATCACCTCCAAGTAGCCTGGGCTCTTCCTGCCAAAGCGCCCCATaGCATCCACCACGAGCCGCA +
Preference number: 4 (lower is better)
Translates to: QPPAGDTQTSPPSSLGSSCQSAP*HPPRAA
Trigger: TGCGGCTCGTGGTGGATGGCATGGGGCGCTTTGGCA...GGAAGAGCCCAGGCTACTTGGAGGTGATGTCTGCGTGTCACCAGCGGGCGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526833.2
ENST00000642585.1
CDS-3UTR GCA 90 bp GCCGACCTTCAGAGACCTGCCAAAGCGCCCCATGCCATCCACCACGAGCCGCATTGCCAAAGCGCCCCATaGCATCCACCACGAGCCGCA +
Preference number: 4 (lower is better)
Translates to: ADLQRPAKAPHAIHHEPHCQSAP*HPPRAA
Trigger: TGCGGCTCGTGGTGGATGGCATGGGGCGCTTTGGCA...ATGCGGCTCGTGGTGGATGGCATGGGGCGCTTTGGCAGGTCTCTGAAGGTCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533715.2
ENST00000644530.1
CDS-3UTR GCA 90 bp GTTGATAGCGCGCACGGTGTTGATGTTGCGCAGCACCAGCAGCATGGGCCGCGGTGCCAAAGCGCCCCATaGCATCCACCACGAGCCGCA +
Preference number: 4 (lower is better)
Translates to: VDSAHGVDVAQHQQHGPRCQSAP*HPPRAA
Trigger: TGCGGCTCGTGGTGGATGGCATGGGGCGCTTTGGCA...CCGCGGCCCATGCTGCTGGTGCTGCGCAACATCAACACCGTGCGCGCTATCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR GCA 90 bp CAGGATGATGGCCCGCCACAGCTGGCAGAGGGCTGCGCGGTCCTTCTCCTCCAGCGACCTTCAGAGACCTaGCAAAGCGCCCCATGCCAT +
Preference number: 4 (lower is better)
Translates to: QDDGPPQLAEGCAVLLLQRPSET*QSAPCH
Trigger: ATGGCATGGGGCGCTTTGGCAGGTCTCTGAAGGTCG...CTGGAGGAGAAGGACCGCGCAGCCCTCTGCCAGCTGTGGCGGGCCATCATCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR GCA 90 bp AGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACAGCCCCGTTGCTGATGGCCCCTaGCACCAGGGCATCAGCCGC +
Preference number: 4 (lower is better)
Translates to: RGVCGHYTASWPSCCHSPVADGP*HQGISR
Trigger: GCGGCTGATGCCCTGGTGGCAGGGGCCATCAGCAAC...GGGGCTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR GCA 90 bp CATCAGCCGCCCGCTGGTGACACGCAGACATCACCTCCAAGTAGCCTGGGCTCTGTTGCTGATGGCCCCTaGCACCAGGGCATCAGCCGC +
Preference number: 4 (lower is better)
Translates to: HQPPAGDTQTSPPSSLGSVADGP*HQGISR
Trigger: GCGGCTGATGCCCTGGTGGCAGGGGCCATCAGCAAC...AGAGCCCAGGCTACTTGGAGGTGATGTCTGCGTGTCACCAGCGGGCGGCTGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526833.2
ENST00000642585.1
CDS-3UTR GCA 90 bp AGCCACGCTGGTGCCATCGTGCAGCTTGGCTCTGTGCACCTGTGCCAGGCTGGCTCACAGCCACGCTGGTaGCATCGTGCAGCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: SHAGAIVQLGSVHLCQAGSQPRW*HRAAWL
Trigger: GAGCCAAGCTGCACGATGGCACCAGCGTGGCTGTGA...GCCAGCCTGGCACAGGTGCACAGAGCCAAGCTGCACGATGGCACCAGCGTGGCT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
CDS-3UTR GCA 90 bp AGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACAGCCCCCTGGACTTGTCCCAGTaGACGCGGGGCACCACGACG +
Preference number: 4 (lower is better)
Translates to: RGVCGHYTASWPSCCHSPLDLSQ*TRGTTT
Trigger: CGTCGTGGTGCCCCGCGTGCACTGGGACAAGTCCAG...GGGGCTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR GCA 90 bp AGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACAGCCCCCAGCTGGCAGAGGGCTaGGCGGTCCTTCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: RGVCGHYTASWPSCCHSPQLAEG*AVLLLQ
Trigger: CTGGAGGAGAAGGACCGCGCAGCCCTCTGCCAGCTG...GGGGCTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR GCA 90 bp AGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACAGCCCCGTCTTGCACCCCCAGTaGGGCTGCGTGCGCCCTCAT +
Preference number: 4 (lower is better)
Translates to: RGVCGHYTASWPSCCHSPVLHPQ*GCVRPH
Trigger: ATGAGGGCGCACGCAGCCGCACTGGGGGTGCAAGAC...GGGGCTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR GCA 90 bp GACCCAGCTGAAGCCAAAGCTGGGGTGCATGACCTCAACGAGCCGCAGCAGGAGGTCTTGCACCCCCAGTaGGGCTGCGTGCGCCCTCAT +
Preference number: 4 (lower is better)
Translates to: DPAEAKAGVHDLNEPQQEVLHPQ*GCVRPH
Trigger: ATGAGGGCGCACGCAGCCGCACTGGGGGTGCAAGAC...CTCCTGCTGCGGCTCGTTGAGGTCATGCACCCCAGCTTTGGCTTCAGCTGGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR GCA 90 bp GCTGATGGCCCCTGCCACCAGGGCATCAGCCGCCCGCTGGTGACACGCAGACATCGACCTTCAGAGACCTaGAGCCTGAGGTCCACTAGG +
Preference number: 4 (lower is better)
Translates to: ADGPCHQGISRPLVTRRHRPSET*SLRSTR
Trigger: CCTAGTGGACCTCAGGCTGCAGGTCTCTGAAGGTCG...ATGTCTGCGTGTCACCAGCGGGCGGCTGATGCCCTGGTGGCAGGGGCCATCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526833.2
ENST00000642585.1
CDS-3UTR CCA 90 bp CCCTGCCACCAGGGCATCAGCCGCCCGCTGGTGACACGCAGACATCACCTCCAATCCTCCACAGGGGTGTaGGGCTGGAGAACCTTGGAG +
Preference number: 4 (lower is better)
Translates to: PCHQGISRPLVTRRHHLQSSTGV*GWRTLE
Trigger: CTCCAAGGTTCTCCAGCCCCACACCCCTGTGGAGGA...TTGGAGGTGATGTCTGCGTGTCACCAGCGGGCGGCTGATGCCCTGGTGGCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526833.2
ENST00000533715.2
ENST00000642585.1
ENST00000644530.1
CDS-3UTR CCA 90 bp CAGCCGCCCGCTGGTGACACGCAGACATCACCTCCAAGTAGCCTGGGCTCTTCCCCCCCACTACCGCGGTaGAGAGCACCTTCCTCCACA +
Preference number: 4 (lower is better)
Translates to: QPPAGDTQTSPPSSLGSSPPLPR*RAPSST
Trigger: TGTGGAGGAAGGTGCTCTCCACCGCGGTAGTGGGGG...GGAAGAGCCCAGGCTACTTGGAGGTGATGTCTGCGTGTCACCAGCGGGCGGCTG
64% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000526833.2
ENST00000642585.1
CDS-3UTR CCA 90 bp GTGGTTGAAGGAGCACAGCCCCTGGCCCAGCTTCACGTAGAGGCCCCCGTTGCTCCCCCACTACCGCGGTaGAGAGCACCTTCCTCCACA +
Preference number: 4 (lower is better)
Translates to: VVEGAQPLAQLHVEAPVAPPLPR*RAPSST
Trigger: TGTGGAGGAAGGTGCTCTCCACCGCGGTAGTGGGGG...AGCAACGGGGGCCTCTACGTGAAGCTGGGCCAGGGGCTGTGCTCCTTCAACCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000526833.2
ENST00000529654.5
ENST00000533715.2
ENST00000642585.1
ENST00000644530.1
ENST00000645307.1
CDS-3UTR CCA 90 bp CCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCACCTCGAAGGACAACATTaGTGCACCACCAGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: PPPSAQGEKGPAGPGRLHLEGQH*CTTSSP
Trigger: TGGACTACTGGTGGTGCACCAATGTTGTCCTTCGAG...GTGCAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CCA 90 bp CCCATGCCATCCACCACGAGCCGCATCCTCCTCTTCTCCCGTGCCTCTGCCATGTCCTGGAAGAGCTCGTaGGGGAGGGCCTGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: PMPSTTSRILLFSRASAMSWKSS*GRAWKS
Trigger: GGACTTCCAGGCCCTCCCCCACGAGCTCTTCCAGGA...CATGGCAGAGGCACGGGAGAAGAGGAGGATGCGGCTCGTGGTGGATGGCATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533715.2
ENST00000644530.1
CDS-3UTR CCA 90 bp TGGAAGCCCCGCTTGAGGGCCCTGTCCTCTAGCACGCGCAGGGTCCGGGTATACCCTTCACAGCCACGCTaGTGCCATCGTGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: WKPRLRALSSSTRRVRVYPSQPR*CHRAAW
Trigger: CCAAGCTGCACGATGGCACCAGCGTGGCTGTGAAGG...GTATACCCGGACCCTGCGCGTGCTAGAGGACAGGGCCCTCAAGCGGGGCTTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
CDS-3UTR CCA 90 bp TTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACAGCCTGCGTGCGCCCTCATaGCGGCGTCGTCCCGCAGGA +
Preference number: 4 (lower is better)
Translates to: LRGVCGHYTASWPSCCHSLRAPS*RRRPAG
Trigger: TCCTGCGGGACGACGCCGCCATGAGGGCGCACGCAG...GCTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CCA 90 bp TGCTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACAGACACCCCGATACGTaGCGCCCGCCAGGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: CLRGVCGHYTASWPSCCHRHPDT*RPPGGS
Trigger: GGAGCCGCCTGGCGGGCGCCACGTATCGGGGTGTCT...GTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CCA 90 bp CTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACAGAGACACCCCGATACGTaGCGCCCGCCAGGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: LERSVWSLHGLLAQLLSQRHPDT*RPPGGS
Trigger: GGAGCCGCCTGGCGGGCGCCACGTATCGGGGTGTCT...CTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CCA 90 bp AGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACAGCCCCCGTGGCGCAGGAGGCTaGTGCCGTAGACACCCCGAT +
Preference number: 4 (lower is better)
Translates to: RGVCGHYTASWPSCCHSPRGAGG*CRRHPD
Trigger: ATCGGGGTGTCTACGGCACCAGCCTCCTGCGCCACG...GGGGCTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CCA 90 bp GACCCAGCTGAAGCCAAAGCTGGGGTGCATGACCTCAACGAGCCGCAGCAGGAGCGTGGCGCAGGAGGCTaGTGCCGTAGACACCCCGAT +
Preference number: 4 (lower is better)
Translates to: DPAEAKAGVHDLNEPQQERGAGG*CRRHPD
Trigger: ATCGGGGTGTCTACGGCACCAGCCTCCTGCGCCACG...CTCCTGCTGCGGCTCGTTGAGGTCATGCACCCCAGCTTTGGCTTCAGCTGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CCA 90 bp AACAACTCATCCACCTCCTGGAAGCCCCGCTTGAGGGCCCTGTCCTCTAGCACGCAGACGACCTTGGCGTaGCGCAGGAGGCTGGTGCCG +
Preference number: 4 (lower is better)
Translates to: NNSSTSWKPRLRALSSSTQTTLA*RRRLVP
Trigger: CGGCACCAGCCTCCTGCGCCACGCCAAGGTCGTCTG...CGTGCTAGAGGACAGGGCCCTCAAGCGGGGCTTCCAGGAGGTGGATGAGTTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CCA 90 bp AGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACAGCCCCGGCACGAGGCTCAGGTaGACCAGAGCACGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: RGVCGHYTASWPSCCHSPGTRLR*TRARAR
Trigger: CCTGGCTCGTGCTCTGGTCCACCTGAGCCTCGTGCC...GGGGCTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CCA 90 bp CGGCAGCTCCCTGAGCACCGCCATGACGGCCTCGAAGCGCTCGCGGGCCATGTCCTTGAGAGGAGTGTGTaGTCATTACACGGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: RQLPEHRHDGLEALAGHVLERSV*SLHGLL
Trigger: CAGGAGGCCGTGTAATGACCACACACTCCTCTCAAG...GACATGGCCCGCGAGCGCTTCGAGGCCGTCATGGCGGTGCTCAGGGAGCTGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR CAA 72 bp TCAAGGAACAACTCATCCACCTCCTGGAAGCCCCGCTaGAGGGCCCTGTCCTCTAGCACGCGCAGGGTCCGG +
Preference number: 4 (lower is better)
Translates to: SRNNSSTSWKPR*RALSSSTRRVR
Trigger: CCGGACCCTGCGCGTGCTAGAGGACAGGGCCCTCAAGCGGGGCTTCCAGGAGGTGGATGAGTTGTTCCTTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
CDS-3UTR TCA 90 bp AAGCCCCGCTTGAGGGCCCTGTCCTCTAGCACGCGCAGGGTCCGGGTATACTCGAGAGCAGAGTGGAAATaGCAGAGCTGCACCGGTCGC +
Preference number: 4 (lower is better)
Translates to: KPRLRALSSSTRRVRVYSRAEWK*QSCTGR
Trigger: GCGACCGGTGCAGCTCTGTCATTTCCACTCTGCTCT...CGAGTATACCCGGACCCTGCGCGTGCTAGAGGACAGGGCCCTCAAGCGGGGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526833.2
ENST00000529654.5
ENST00000642585.1
ENST00000645307.1
CDS-3UTR TCA 90 bp GGTGACACGCAGACATCACCTCCAAGTAGCCTGGGCTCTTCCACCCCTCGAAGGCCCGTGCCTCTGCCATaGCATAGCGGGCTCCGAGGA +
Preference number: 4 (lower is better)
Translates to: GDTQTSPPSSLGSSTPRRPVPLP*HSGLRG
Trigger: TCCTCGGAGCCCGCTATGTCATGGCAGAGGCACGGG...CCTTCGAGGGGTGGAAGAGCCCAGGCTACTTGGAGGTGATGTCTGCGTGTCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526833.2
ENST00000642585.1
CDS-3UTR TCA 90 bp GCTGGTGACACGCAGACATCACCTCCAAGTAGCCTGGGCTCTTCCACCCCTCGATCAGCCGCCCGCTGGTaGCACGCAGACATCACCTCC +
Preference number: 4 (lower is better)
Translates to: AGDTQTSPPSSLGSSTPRSAARW*HADITS
Trigger: GGAGGTGATGTCTGCGTGTCACCAGCGGGCGGCTGA...TCGAGGGGTGGAAGAGCCCAGGCTACTTGGAGGTGATGTCTGCGTGTCACCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526833.2
ENST00000642585.1
CDS-3UTR TCA 90 bp GCTTGGCTCTGTGCACCTGTGCCAGGCTGGCGGCAGCAATTGGCTGGTAGTCAATCAGCCGCCCGCTGGTaGCACGCAGACATCACCTCC +
Preference number: 4 (lower is better)
Translates to: AWLCAPVPGWRQQLAGSQSAARW*HADITS
Trigger: GGAGGTGATGTCTGCGTGTCACCAGCGGGCGGCTGA...TTGACTACCAGCCAATTGCTGCCGCCAGCCTGGCACAGGTGCACAGAGCCAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
CDS-3UTR TCA 90 bp CAGGCTGGCGGCAGCAATTGGCTGGTAGTCAAACTCCTGGAAGAGCTCGTGGGGCCTGGAAGCCCCGCTTaGGGGCCCTGTCCTCTAGCA +
Preference number: 4 (lower is better)
Translates to: QAGGSNWLVVKLLEELVGPGSPA*GPCPLA
Trigger: TGCTAGAGGACAGGGCCCTCAAGCGGGGCTTCCAGG...CCCCACGAGCTCTTCCAGGAGTTTGACTACCAGCCAATTGCTGCCGCCAGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
CDS-3UTR TCA 90 bp GTGGTTGAAGGAGCACAGCCCCTGGCCCAGCTTCACGTAGAGGCCCCCGTTGCTCAAAGCTGGGGTGCATaGCCTCAACGAGCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: VVEGAQPLAQLHVEAPVAQSWGA*PQRAAA
Trigger: TGCTGCGGCTCGTTGAGGTCATGCACCCCAGCTTTG...AGCAACGGGGGCCTCTACGTGAAGCTGGGCCAGGGGCTGTGCTCCTTCAACCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR TCA 90 bp AACAACTCATCCACCTCCTGGAAGCCCCGCTTGAGGGCCCTGTCCTCTAGCACGGCACGGGGCGCTGCATaGGCATCTCGGCGAACAGGA +
Preference number: 4 (lower is better)
Translates to: NNSSTSWKPRLRALSSSTARGAA*ASRRTG
Trigger: TCCTGTTCGCCGAGATGCTCATGCAGCGCCCCGTGC...CGTGCTAGAGGACAGGGCCCTCAAGCGGGGCTTCCAGGAGGTGGATGAGTTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR TCA 90 bp CTTGGCTCTGTGCACCTGTGCCAGGCTGGCGGCAGCAATTGGCTGGTAGTCAAACGCAGAAGTCGGCAGTaGGCACGCGCTGGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: LGSVHLCQAGGSNWLVVKRRSRQ*ARAGES
Trigger: GCTCTCCCCAGCGCGTGCTCACTGCCGACTTCTGCG...TTTGACTACCAGCCAATTGCTGCCGCCAGCCTGGCACAGGTGCACAGAGCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR TCA 90 bp CCCTGCCACCAGGGCATCAGCCGCCCGCTGGTGACACGCAGACATCACCTCCAACAGAGACCTGCAGCCTaGGGTCCACTAGGAAGAGAG +
Preference number: 4 (lower is better)
Translates to: PCHQGISRPLVTRRHHLQQRPAA*GPLGRE
Trigger: CTCTCTTCCTAGTGGACCTCAGGCTGCAGGTCTCTG...TTGGAGGTGATGTCTGCGTGTCACCAGCGGGCGGCTGATGCCCTGGTGGCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526833.2
ENST00000642585.1
CDS-3UTR GCA 90 bp CATGCCATCCACCACGAGCCGCATCCTCCTCTTCTCCCGTGCCTCTGCCATGACCACATCTCCGACCACTaGTCCGCTCTTCTCCCGCCC +
Preference number: 4 (lower is better)
Translates to: HAIHHEPHPPLLPCLCHDHISDH*SALLPP
Trigger: GGGCGGGAGAAGAGCGGAGCAGTGGTCGGAGATGTG...GTCATGGCAGAGGCACGGGAGAAGAGGAGGATGCGGCTCGTGGTGGATGGCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533715.2
ENST00000644530.1
CDS-3UTR GCA 90 bp ACCTTCACAGCCACGCTGGTGCCATCGTGCAGCTTGGCTCTGTGCACCTGTGCCCACATCTCCGACCACTaGTCCGCTCTTCTCCCGCCC +
Preference number: 4 (lower is better)
Translates to: TFTATLVPSCSLALCTCAHISDH*SALLPP
Trigger: GGGCGGGAGAAGAGCGGAGCAGTGGTCGGAGATGTG...GGCACAGGTGCACAGAGCCAAGCTGCACGATGGCACCAGCGTGGCTGTGAAGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
CDS-3UTR GCA 90 bp ACCTTCACAGCCACGCTGGTGCCATCGTGCAGCTTGGCTCTGTGCACCTGTGCCGACGGCCAGGGCTTCTaGCTGCTGTGCAGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: TFTATLVPSCSLALCTCADGQGF*LLCSRA
Trigger: TGCTCTGCTGCACAGCAGGCAGAAGCCCTGGCCGTC...GGCACAGGTGCACAGAGCCAAGCTGCACGATGGCACCAGCGTGGCTGTGAAGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
CDS-3UTR GCA 90 bp CGTGGGGGAGGGCCTGGAAGTCCTCAAGGAACAACTCATCCACCTCCTGGAAGCGTTGCTGATGGCCCCTaGCACCAGGGCATCAGCCGC +
Preference number: 4 (lower is better)
Translates to: RGGGPGSPQGTTHPPPGSVADGP*HQGISR
Trigger: GCGGCTGATGCCCTGGTGGCAGGGGCCATCAGCAAC...GCTTCCAGGAGGTGGATGAGTTGTTCCTTGAGGACTTCCAGGCCCTCCCCCACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
CDS-3UTR GCA 90 bp ACCTTCACAGCCACGCTGGTGCCATCGTGCAGCTTGGCTCTGTGCACCTGTGCCTGCAGCTTGGCTCTGTaGACCTGTGCCAGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: TFTATLVPSCSLALCTCACSLAL*TCARLA
Trigger: CGCCAGCCTGGCACAGGTGCACAGAGCCAAGCTGCA...GGCACAGGTGCACAGAGCCAAGCTGCACGATGGCACCAGCGTGGCTGTGAAGGT
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
CDS-3UTR GCA 90 bp CACAGCCACGCTGGTGCCATCGTGCAGCTTGGCTCTGTGCACCTGTGCCAGGCTACGCTGGTGCCATCGTaGAGCTTGGCTCTGTGCACC +
Preference number: 4 (lower is better)
Translates to: HSHAGAIVQLGSVHLCQATLVPS*SLALCT
Trigger: GGTGCACAGAGCCAAGCTGCACGATGGCACCAGCGT...AGCCTGGCACAGGTGCACAGAGCCAAGCTGCACGATGGCACCAGCGTGGCTGTG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
CDS-3UTR GCA 90 bp CGCGGTCCTTCTCCTCCAGGAACTGGTAGAGCCCGTGGTCCAGCAGCACCAGCTACGCTGGTGCCATCGTaGAGCTTGGCTCTGTGCACC +
Preference number: 4 (lower is better)
Translates to: RGPSPPGTGRARGPAAPATLVPS*SLALCT
Trigger: GGTGCACAGAGCCAAGCTGCACGATGGCACCAGCGT...AGCTGGTGCTGCTGGACCACGGGCTCTACCAGTTCCTGGAGGAGAAGGACCGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR GCA 90 bp CCCGCCGGCCCTGGGCGGCTGCACCCTAGGTCTCCAGGTACTGGTAGAGCTCCTTTTTCTGCTATGTCATaGACTGCCAGCCCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: PAGPGRLHPRSPGTGRAPFSAMS*TASPWL
Trigger: GAGCCAGGGGCTGGCAGTGCATGACATAGCAGAAAA...AGGAGCTCTACCAGTACCTGGAGACCTAGGGTGCAGCCGCCCAGGGCCGGCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR GCA 90 bp CTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACAGTCGCGGCTCAGTAGGTaGGAGCCCCACAGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: LERSVWSLHGLLAQLLSQSRLSR*EPHSCP
Trigger: GGGGCAGCTGTGGGGCTCGCACCTACTGAGCCGCGA...CTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR GCA 90 bp TGCTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACTCGCGGCTCAGTAGGTaGGAGCCCCACAGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: CLRGVCGHYTASWPSCCHSRLSR*EPHSCP
Trigger: GGGGCAGCTGTGGGGCTCGCACCTACTGAGCCGCGA...GTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR GCA 90 bp CTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACAGCCGGCCCTGGGCGGCTaGACCCTAGGTCTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: LERSVWSLHGLLAQLLSQPALGG*TLGLQV
Trigger: TACCTGGAGACCTAGGGTGCAGCCGCCCAGGGCCGG...CTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR GCA 90 bp TTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACAGCCCGGCCCTGGGCGGCTaGACCCTAGGTCTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: LRGVCGHYTASWPSCCHSPALGG*TLGLQV
Trigger: TACCTGGAGACCTAGGGTGCAGCCGCCCAGGGCCGG...GCTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CCA 90 bp CCGCCCGCTGGTGACACGCAGACATCACCTCCAAGTAGCCTGGGCTCTTCCACCGGGGCTGGAGAACCTTaGAGGAAGGCCCCTGACGTT +
Preference number: 4 (lower is better)
Translates to: PPAGDTQTSPPSSLGSSTGAGEP*RKAPDV
Trigger: AACGTCAGGGGCCTTCCTCCAAGGTTCTCCAGCCCC...GGTGGAAGAGCCCAGGCTACTTGGAGGTGATGTCTGCGTGTCACCAGCGGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526833.2
ENST00000642585.1
CDS-3UTR CCA 90 bp GCCGACCTTCAGAGACCTGCCAAAGCGCCCCATGCCATCCACCACGAGCCGCATGGGGCTGGAGAACCTTaGAGGAAGGCCCCTGACGTT +
Preference number: 4 (lower is better)
Translates to: ADLQRPAKAPHAIHHEPHGAGEP*RKAPDV
Trigger: AACGTCAGGGGCCTTCCTCCAAGGTTCTCCAGCCCC...ATGCGGCTCGTGGTGGATGGCATGGGGCGCTTTGGCAGGTCTCTGAAGGTCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000533715.2
ENST00000644530.1
CDS-3UTR CCA 90 bp GTGGTTGAAGGAGCACAGCCCCTGGCCCAGCTTCACGTAGAGGCCCCCGTTGCTTCCTCCACAGGGGTGTaGGGCTGGAGAACCTTGGAG +
Preference number: 4 (lower is better)
Translates to: VVEGAQPLAQLHVEAPVASSTGV*GWRTLE
Trigger: CTCCAAGGTTCTCCAGCCCCACACCCCTGTGGAGGA...AGCAACGGGGGCCTCTACGTGAAGCTGGGCCAGGGGCTGTGCTCCTTCAACCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000526833.2
ENST00000529654.5
ENST00000533715.2
ENST00000642585.1
ENST00000644530.1
ENST00000645307.1
CDS-3UTR CCA 90 bp CATCAGCCGCCCGCTGGTGACACGCAGACATCACCTCCAAGTAGCCTGGGCTCTCCCCCACTACCGCGGTaGAGAGCACCTTCCTCCACA +
Preference number: 4 (lower is better)
Translates to: HQPPAGDTQTSPPSSLGSPPLPR*RAPSST
Trigger: TGTGGAGGAAGGTGCTCTCCACCGCGGTAGTGGGGG...AGAGCCCAGGCTACTTGGAGGTGATGTCTGCGTGTCACCAGCGGGCGGCTGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526833.2
ENST00000642585.1
CDS-3UTR CCA 90 bp GTTGAAGGAGCACAGCCCCTGGCCCAGCTTCACGTAGAGGCCCCCGTTGCTGATGCACCTGTGCCAGGCTaGCGGCAGCAATTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: VEGAQPLAQLHVEAPVADAPVPG*RQQLAG
Trigger: ACCAGCCAATTGCTGCCGCCAGCCTGGCACAGGTGC...ATCAGCAACGGGGGCCTCTACGTGAAGCTGGGCCAGGGGCTGTGCTCCTTCAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
CDS-3UTR CCA 90 bp TGGAAGCCCCGCTTGAGGGCCCTGTCCTCTAGCACGCGCAGGGTCCGGGTATACTGCCATCGTGCAGCTTaGCTCTGTGCACCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: WKPRLRALSSSTRRVRVYCHRAA*LCAPVP
Trigger: TGGCACAGGTGCACAGAGCCAAGCTGCACGATGGCA...GTATACCCGGACCCTGCGCGTGCTAGAGGACAGGGCCCTCAAGCGGGGCTTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
CDS-3UTR CCA 90 bp AGGCCGACCTTCAGAGACCTGCCAAAGCGCCCCATGCCATCCACCACGAGCCGCTGCCATCGTGCAGCTTaGCTCTGTGCACCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: RPTFRDLPKRPMPSTTSRCHRAA*LCAPVP
Trigger: TGGCACAGGTGCACAGAGCCAAGCTGCACGATGGCA...GCGGCTCGTGGTGGATGGCATGGGGCGCTTTGGCAGGTCTCTGAAGGTCGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533715.2
ENST00000644530.1
CDS-3UTR CCA 90 bp CGCGGTCCTTCTCCTCCAGGAACTGGTAGAGCCCGTGGTCCAGCAGCACCAGCTCCTTCACAGCCACGCTaGTGCCATCGTGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: RGPSPPGTGRARGPAAPAPSQPR*CHRAAW
Trigger: CCAAGCTGCACGATGGCACCAGCGTGGCTGTGAAGG...AGCTGGTGCTGCTGGACCACGGGCTCTACCAGTTCCTGGAGGAGAAGGACCGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CCA 90 bp TGCTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACCAGACGACCTTGGCGTaGCGCAGGAGGCTGGTGCCG +
Preference number: 4 (lower is better)
Translates to: CLRGVCGHYTASWPSCCHQTTLA*RRRLVP
Trigger: CGGCACCAGCCTCCTGCGCCACGCCAAGGTCGTCTG...GTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CCA 90 bp TGGCTGGTAGTCAAACTCCTGGAAGAGCTCGTGGGGGAGGGCCTGGAAGTCCTCGTAGAGCTCCTCCGCTaGGGGCACGAGGCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: WLVVKLLEELVGEGLEVLVELLR*GHEAQV
Trigger: CACCTGAGCCTCGTGCCCCCAGCGGAGGAGCTCTAC...GAGGACTTCCAGGCCCTCCCCCACGAGCTCTTCCAGGAGTTTGACTACCAGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CCA 90 bp CAGGAGCTCCAGGGTGTGGATGTCCCCATCAAAGCGGTCCCGCAGGTCGATGTAGCAGTGAGCACGCGCTaGGGAGAGCAAGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: QELQGVDVPIKAVPQVDVAVSTR*GEQEAG
Trigger: CCCAGCCTCTTGCTCTCCCCAGCGCGTGCTCACTGC...TACATCGACCTGCGGGACCGCTTTGATGGGGACATCCACACCCTGGAGCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR TCA 90 bp CTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACAGCCCGTGCCTCTGCCATaGCATAGCGGGCTCCGAGGA +
Preference number: 4 (lower is better)
Translates to: LERSVWSLHGLLAQLLSQPVPLP*HSGLRG
Trigger: TCCTCGGAGCCCGCTATGTCATGGCAGAGGCACGGG...CTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR TCA 90 bp TGCTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACCCTGGAAGCCCCGCTTaGGGGCCCTGTCCTCTAGCA +
Preference number: 4 (lower is better)
Translates to: CLRGVCGHYTASWPSCCHPGSPA*GPCPLA
Trigger: TGCTAGAGGACAGGGCCCTCAAGCGGGGCTTCCAGG...GTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR TCA 90 bp GTGACACGCAGACATCACCTCCAAGTAGCCTGGGCTCTTCCACCCCTCGAAGGACCTGGAAGCCCCGCTTaGGGGCCCTGTCCTCTAGCA +
Preference number: 4 (lower is better)
Translates to: VTRRHHLQVAWALPPLEGPGSPA*GPCPLA
Trigger: TGCTAGAGGACAGGGCCCTCAAGCGGGGCTTCCAGG...TCCTTCGAGGGGTGGAAGAGCCCAGGCTACTTGGAGGTGATGTCTGCGTGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000526833.2
ENST00000642585.1
CDS-3UTR TCA 90 bp AGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACAGCCCCCAAAGCTGGGGTGCATaGCCTCAACGAGCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: RGVCGHYTASWPSCCHSPQSWGA*PQRAAA
Trigger: TGCTGCGGCTCGTTGAGGTCATGCACCCCAGCTTTG...GGGGCTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR TCA 90 bp TGCTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACGCACGGGGCGCTGCATaGGCATCTCGGCGAACAGGA +
Preference number: 4 (lower is better)
Translates to: CLRGVCGHYTASWPSCCHARGAA*ASRRTG
Trigger: TCCTGTTCGCCGAGATGCTCATGCAGCGCCCCGTGC...GTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR TCA 90 bp AGTCAAACTCCTGGAAGAGCTCGTGGGGGAGGGCCTGGAAGTCCTCAAGGAACACGCAGAAGTCGGCAGTaGGCACGCGCTGGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: SQTPGRARGGGPGSPQGTRRSRQ*ARAGES
Trigger: GCTCTCCCCAGCGCGTGCTCACTGCCGACTTCTGCG...TGTTCCTTGAGGACTTCCAGGCCCTCCCCCACGAGCTCTTCCAGGAGTTTGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR GCA 90 bp CATGCCATCCACCACGAGCCGCATCCTCCTCTTCTCCCGTGCCTCTGCCATGACCTTCTCCCGTGCCTCTaGCATGACATAGCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: HAIHHEPHPPLLPCLCHDLLPCL*HDIAGS
Trigger: GGAGCCCGCTATGTCATGGCAGAGGCACGGGAGAAG...GTCATGGCAGAGGCACGGGAGAAGAGGAGGATGCGGCTCGTGGTGGATGGCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533715.2
ENST00000644530.1
CDS-3UTR GCA 90 bp GAGGGCCTGGAAGTCCTCAAGGAACAACTCATCCACCTCCTGGAAGCCCCGCTTCCGCGCACAGCGCTCTaGGTTGCGGCCCTCATTCTC +
Preference number: 4 (lower is better)
Translates to: EGLEVLKEQLIHLLEAPLPRTAL*VAALIL
Trigger: GAGAATGAGGGCCGCAACGCAGAGCGCTGTGCGCGG...AAGCGGGGCTTCCAGGAGGTGGATGAGTTGTTCCTTGAGGACTTCCAGGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR GCA 90 bp TGCTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACGTCTTGCACCCCCAGTaGGGCTGCGTGCGCCCTCAT +
Preference number: 4 (lower is better)
Translates to: CLRGVCGHYTASWPSCCHVLHPQ*GCVRPH
Trigger: ATGAGGGCGCACGCAGCCGCACTGGGGGTGCAAGAC...GTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR GCA 90 bp CTTGGCTCTGTGCACCTGTGCCAGGCTGGCGGCAGCAATTGGCTGGTAGTCAAAAGGCGCACGGGGCGCTaGATGAGCATCTCGGCGAAC +
Preference number: 4 (lower is better)
Translates to: LGSVHLCQAGGSNWLVVKRRTGR*MSISAN
Trigger: GTTCGCCGAGATGCTCATGCAGCGCCCCGTGCGCCT...TTTGACTACCAGCCAATTGCTGCCGCCAGCCTGGCACAGGTGCACAGAGCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR GCA 90 bp CTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACAGAGGCGCACGGGGCGCTaGATGAGCATCTCGGCGAAC +
Preference number: 4 (lower is better)
Translates to: LERSVWSLHGLLAQLLSQRRTGR*MSISAN
Trigger: GTTCGCCGAGATGCTCATGCAGCGCCCCGTGCGCCT...CTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR GCA 90 bp AGCAATTGGCTGGTAGTCAAACTCCTGGAAGAGCTCGTGGGGGAGGGCCTGGAATCGCGGCTCAGTAGGTaGGAGCCCCACAGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: SNWLVVKLLEELVGEGLESRLSR*EPHSCP
Trigger: GGGGCAGCTGTGGGGCTCGCACCTACTGAGCCGCGA...TTCCAGGCCCTCCCCCACGAGCTCTTCCAGGAGTTTGACTACCAGCCAATTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR GCA 90 bp TGCTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACGGCGCAGGAGGCTGGTaGCGTAGACACCCCGATACG +
Preference number: 4 (lower is better)
Translates to: CLRGVCGHYTASWPSCCHGAGGW*RRHPDT
Trigger: CGTATCGGGGTGTCTACGGCACCAGCCTCCTGCGCC...GTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR GCA 90 bp GTGGTTGAAGGAGCACAGCCCCTGGCCCAGCTTCACGTAGAGGCCCCCGTTGCTCGACCTTCAGAGACCTaGAGCCTGAGGTCCACTAGG +
Preference number: 4 (lower is better)
Translates to: VVEGAQPLAQLHVEAPVARPSET*SLRSTR
Trigger: CCTAGTGGACCTCAGGCTGCAGGTCTCTGAAGGTCG...AGCAACGGGGGCCTCTACGTGAAGCTGGGCCAGGGGCTGTGCTCCTTCAACCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526833.2
ENST00000642585.1
CDS-3UTR CCA 90 bp AGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACAGCCCCTCCTCCACAGGGGTGTaGGGCTGGAGAACCTTGGAG +
Preference number: 4 (lower is better)
Translates to: RGVCGHYTASWPSCCHSPSSTGV*GWRTLE
Trigger: CTCCAAGGTTCTCCAGCCCCACACCCCTGTGGAGGA...GGGGCTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CCA 90 bp CGTGGGGGAGGGCCTGGAAGTCCTCAAGGAACAACTCATCCACCTCCTGGAAGCCCCCCACTACCGCGGTaGAGAGCACCTTCCTCCACA +
Preference number: 4 (lower is better)
Translates to: RGGGPGSPQGTTHPPPGSPPLPR*RAPSST
Trigger: TGTGGAGGAAGGTGCTCTCCACCGCGGTAGTGGGGG...GCTTCCAGGAGGTGGATGAGTTGTTCCTTGAGGACTTCCAGGCCCTCCCCCACG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
CDS-3UTR CCA 90 bp CCAAAGCTGGGGTGCATGACCTCAACGAGCCGCAGCAGGAGCTCCAGGGTGTGGTCGTGGGGGAGGGCCTaGAAGTCCTCAAGGAACAAC +
Preference number: 4 (lower is better)
Translates to: PKLGCMTSTSRSRSSRVWSWGRA*KSSRNN
Trigger: GTTGTTCCTTGAGGACTTCCAGGCCCTCCCCCACGA...CCACACCCTGGAGCTCCTGCTGCGGCTCGTTGAGGTCATGCACCCCAGCTTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CCA 90 bp CTGCCACCAGGGCATCAGCCGCCCGCTGGTGACACGCAGACATCACCTCCAAGTTCGTGGGGGAGGGCCTaGAAGTCCTCAAGGAACAAC +
Preference number: 4 (lower is better)
Translates to: LPPGHQPPAGDTQTSPPSSWGRA*KSSRNN
Trigger: GTTGTTCCTTGAGGACTTCCAGGCCCTCCCCCACGA...ACTTGGAGGTGATGTCTGCGTGTCACCAGCGGGCGGCTGATGCCCTGGTGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533715.2
ENST00000644530.1
CDS-3UTR CCA 90 bp AGCCACGCTGGTGCCATCGTGCAGCTTGGCTCTGTGCACCTGTGCCAGGCTGGCGCTGGCGGCAGCAATTaGCTGGTAGTCAAACTCCTG +
Preference number: 4 (lower is better)
Translates to: SHAGAIVQLGSVHLCQAGAGGSN*LVVKLL
Trigger: CAGGAGTTTGACTACCAGCCAATTGCTGCCGCCAGC...GCCAGCCTGGCACAGGTGCACAGAGCCAAGCTGCACGATGGCACCAGCGTGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
CDS-3UTR CCA 90 bp ACCTTCACAGCCACGCTGGTGCCATCGTGCAGCTTGGCTCTGTGCACCTGTGCCGTCCCCTTCAGGTCCTaGAGGACCCAGCTGAAGCCA +
Preference number: 4 (lower is better)
Translates to: TFTATLVPSCSLALCTCAVPFRS*RTQLKP
Trigger: TGGCTTCAGCTGGGTCCTCCAGGACCTGAAGGGGAC...GGCACAGGTGCACAGAGCCAAGCTGCACGATGGCACCAGCGTGGCTGTGAAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CCA 90 bp CTGCACCTTCACAGCCACGCTGGTGCCATCGTGCAGCTTGGCTCTGTGCACCTGGTCCCCTTCAGGTCCTaGAGGACCCAGCTGAAGCCA +
Preference number: 4 (lower is better)
Translates to: LHLHSHAGAIVQLGSVHLVPFRS*RTQLKP
Trigger: TGGCTTCAGCTGGGTCCTCCAGGACCTGAAGGGGAC...CAGGTGCACAGAGCCAAGCTGCACGATGGCACCAGCGTGGCTGTGAAGGTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CCA 90 bp TCAAGGAACAACTCATCCACCTCCTGGAAGCCCCGCTTGAGGGCCCTGTCCTCTCGTGGCGCAGGAGGCTaGTGCCGTAGACACCCCGAT +
Preference number: 4 (lower is better)
Translates to: SRNNSSTSWKPRLRALSSRGAGG*CRRHPD
Trigger: ATCGGGGTGTCTACGGCACCAGCCTCCTGCGCCACG...AGAGGACAGGGCCCTCAAGCGGGGCTTCCAGGAGGTGGATGAGTTGTTCCTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CCA 90 bp TGCTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACTCTCCCAGACGACCTTaGCGTGGCGCAGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: CLRGVCGHYTASWPSCCHSPRRP*RGAGGW
Trigger: CCAGCCTCCTGCGCCACGCCAAGGTCGTCTGGGAGA...GTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CCA 90 bp TGCTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACGGCACGAGGCTCAGGTaGACCAGAGCACGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: CLRGVCGHYTASWPSCCHGTRLR*TRARAR
Trigger: CCTGGCTCGTGCTCTGGTCCACCTGAGCCTCGTGCC...GTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CCA 90 bp TGCTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACGTAGAGCTCCTCCGCTaGGGGCACGAGGCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: CLRGVCGHYTASWPSCCHVELLR*GHEAQV
Trigger: CACCTGAGCCTCGTGCCCCCAGCGGAGGAGCTCTAC...GTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CCA 90 bp TCAAGGAACAACTCATCCACCTCCTGGAAGCCCCGCTTGAGGGCCCTGTCCTCTGTAGAGCTCCTCCGCTaGGGGCACGAGGCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: SRNNSSTSWKPRLRALSSVELLR*GHEAQV
Trigger: CACCTGAGCCTCGTGCCCCCAGCGGAGGAGCTCTAC...AGAGGACAGGGCCCTCAAGCGGGGCTTCCAGGAGGTGGATGAGTTGTTCCTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CCA 90 bp TTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACAGCGCAGTGAGCACGCGCTaGGGAGAGCAAGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LRGVCGHYTASWPSCCHSAVSTR*GEQEAG
Trigger: CCCAGCCTCTTGCTCTCCCCAGCGCGTGCTCACTGC...GCTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR TCA 90 bp GTTGAAGGAGCACAGCCCCTGGCCCAGCTTCACGTAGAGGCCCCCGTTGCTGATAGAGCAGAGTGGAAATaGCAGAGCTGCACCGGTCGC +
Preference number: 4 (lower is better)
Translates to: VEGAQPLAQLHVEAPVADRAEWK*QSCTGR
Trigger: GCGACCGGTGCAGCTCTGTCATTTCCACTCTGCTCT...ATCAGCAACGGGGGCCTCTACGTGAAGCTGGGCCAGGGGCTGTGCTCCTTCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000526833.2
ENST00000529654.5
ENST00000642585.1
ENST00000645307.1
CDS-3UTR TCA 90 bp TTGCTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCATCAGCCGCCCGCTGGTaGCACGCAGACATCACCTCC +
Preference number: 4 (lower is better)
Translates to: LLERSVWSLHGLLAQLLSSAARW*HADITS
Trigger: GGAGGTGATGTCTGCGTGTCACCAGCGGGCGGCTGA...TGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR TCA 90 bp ATTGGTGCACCACCAGTAGTCCAGGGAGATCTGCAGGCCGACCTTCAGAGACCTTCAGCCGCCCGCTGGTaGCACGCAGACATCACCTCC +
Preference number: 4 (lower is better)
Translates to: IGAPPVVQGDLQADLQRPSAARW*HADITS
Trigger: GGAGGTGATGTCTGCGTGTCACCAGCGGGCGGCTGA...AGGTCTCTGAAGGTCGGCCTGCAGATCTCCCTGGACTACTGGTGGTGCACCAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533715.2
ENST00000644530.1
CDS-3UTR TCA 90 bp CACCCCTCGAAGGACAACATTGGTGCACCACCAGTAGTCCAGGGAGATCTGCAGTCAGCCGCCCGCTGGTaGCACGCAGACATCACCTCC +
Preference number: 4 (lower is better)
Translates to: HPSKDNIGAPPVVQGDLQSAARW*HADITS
Trigger: GGAGGTGATGTCTGCGTGTCACCAGCGGGCGGCTGA...CTGCAGATCTCCCTGGACTACTGGTGGTGCACCAATGTTGTCCTTCGAGGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526833.2
ENST00000533715.2
ENST00000642585.1
ENST00000644530.1
CDS-3UTR TCA 90 bp CATCAGCCGCCCGCTGGTGACACGCAGACATCACCTCCAAGTAGCCTGGGCTCTCAGAGACCTGCAGCCTaGGGTCCACTAGGAAGAGAG +
Preference number: 4 (lower is better)
Translates to: HQPPAGDTQTSPPSSLGSQRPAA*GPLGRE
Trigger: CTCTCTTCCTAGTGGACCTCAGGCTGCAGGTCTCTG...AGAGCCCAGGCTACTTGGAGGTGATGTCTGCGTGTCACCAGCGGGCGGCTGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526833.2
ENST00000642585.1
CDS-3UTR GCA 90 bp TGCTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACCACATCTCCGACCACTaGTCCGCTCTTCTCCCGCCC +
Preference number: 4 (lower is better)
Translates to: CLRGVCGHYTASWPSCCHHISDH*SALLPP
Trigger: GGGCGGGAGAAGAGCGGAGCAGTGGTCGGAGATGTG...GTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR GCA 90 bp TCAAGGAACAACTCATCCACCTCCTGGAAGCCCCGCTTGAGGGCCCTGTCCTCTCACATCTCCGACCACTaGTCCGCTCTTCTCCCGCCC +
Preference number: 4 (lower is better)
Translates to: SRNNSSTSWKPRLRALSSHISDH*SALLPP
Trigger: GGGCGGGAGAAGAGCGGAGCAGTGGTCGGAGATGTG...AGAGGACAGGGCCCTCAAGCGGGGCTTCCAGGAGGTGGATGAGTTGTTCCTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
CDS-3UTR GCA 90 bp TGCTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACGACGGCCAGGGCTTCTaGCTGCTGTGCAGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: CLRGVCGHYTASWPSCCHDGQGF*LLCSRA
Trigger: TGCTCTGCTGCACAGCAGGCAGAAGCCCTGGCCGTC...GTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR GCA 90 bp GTGACACGCAGACATCACCTCCAAGTAGCCTGGGCTCTTCCACCCCTCGAAGGAGACGGCCAGGGCTTCTaGCTGCTGTGCAGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: VTRRHHLQVAWALPPLEGDGQGF*LLCSRA
Trigger: TGCTCTGCTGCACAGCAGGCAGAAGCCCTGGCCGTC...TCCTTCGAGGGGTGGAAGAGCCCAGGCTACTTGGAGGTGATGTCTGCGTGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526833.2
ENST00000642585.1
CDS-3UTR GCA 90 bp TTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACAGCGACGGCCAGGGCTTCTaGCTGCTGTGCAGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: LRGVCGHYTASWPSCCHSDGQGF*LLCSRA
Trigger: TGCTCTGCTGCACAGCAGGCAGAAGCCCTGGCCGTC...GCTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR GCA 90 bp TCAAGGAACAACTCATCCACCTCCTGGAAGCCCCGCTTGAGGGCCCTGTCCTCTGACGGCCAGGGCTTCTaGCTGCTGTGCAGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: SRNNSSTSWKPRLRALSSDGQGF*LLCSRA
Trigger: TGCTCTGCTGCACAGCAGGCAGAAGCCCTGGCCGTC...AGAGGACAGGGCCCTCAAGCGGGGCTTCCAGGAGGTGGATGAGTTGTTCCTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
CDS-3UTR GCA 90 bp GAGGGCCACGTTGATAGCGCGCACGGTGTTGATGTTGCGCAGCACCAGCAGCATCTTCTCCCGTGCCTCTaGCATGACATAGCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: EGHVDSAHGVDVAQHQQHLLPCL*HDIAGS
Trigger: GGAGCCCGCTATGTCATGGCAGAGGCACGGGAGAAG...ATGCTGCTGGTGCTGCGCAACATCAACACCGTGCGCGCTATCAACGTGGCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR GCA 90 bp TGGAAGCCCCGCTTGAGGGCCCTGTCCTCTAGCACGCGCAGGGTCCGGGTATACGAAGGACAACATTGGTaGACCACCAGTAGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: WKPRLRALSSSTRRVRVYEGQHW*TTSSPG
Trigger: CCCTGGACTACTGGTGGTGCACCAATGTTGTCCTTC...GTATACCCGGACCCTGCGCGTGCTAGAGGACAGGGCCCTCAAGCGGGGCTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000526833.2
ENST00000529654.5
ENST00000533715.2
ENST00000642585.1
ENST00000644530.1
ENST00000645307.1
CDS-3UTR GCA 90 bp GGACAACATTGGTGCACCACCAGTAGTCCAGGGAGATCTGCAGGCCGACCTTCAGTTGCTGATGGCCCCTaGCACCAGGGCATCAGCCGC +
Preference number: 4 (lower is better)
Translates to: GQHWCTTSSPGRSAGRPSVADGP*HQGISR
Trigger: GCGGCTGATGCCCTGGTGGCAGGGGCCATCAGCAAC...TGAAGGTCGGCCTGCAGATCTCCCTGGACTACTGGTGGTGCACCAATGTTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533715.2
ENST00000644530.1
CDS-3UTR GCA 90 bp TTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACAGCTGCAGCTTGGCTCTGTaGACCTGTGCCAGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: LRGVCGHYTASWPSCCHSCSLAL*TCARLA
Trigger: CGCCAGCCTGGCACAGGTGCACAGAGCCAAGCTGCA...GCTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR GCA 90 bp GAGGGCCACGTTGATAGCGCGCACGGTGTTGATGTTGCGCAGCACCAGCAGCATACGCTGGTGCCATCGTaGAGCTTGGCTCTGTGCACC +
Preference number: 4 (lower is better)
Translates to: EGHVDSAHGVDVAQHQQHTLVPS*SLALCT
Trigger: GGTGCACAGAGCCAAGCTGCACGATGGCACCAGCGT...ATGCTGCTGGTGCTGCGCAACATCAACACCGTGCGCGCTATCAACGTGGCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR GCA 90 bp AGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACAGCCCCAAGCCAAAGCTGGGGTaGATGACCTCAACGAGCCGC +
Preference number: 4 (lower is better)
Translates to: RGVCGHYTASWPSCCHSPKPKLG*MTSTSR
Trigger: GCGGCTCGTTGAGGTCATGCACCCCAGCTTTGGCTT...GGGGCTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR GCA 90 bp TCAAACTCCTGGAAGAGCTCGTGGGGGAGGGCCTGGAAGTCCTCAAGGAACAACCAGCTGGCAGAGGGCTaGGCGGTCCTTCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: SNSWKSSWGRAWKSSRNNQLAEG*AVLLLQ
Trigger: CTGGAGGAGAAGGACCGCGCAGCCCTCTGCCAGCTG...GTTGTTCCTTGAGGACTTCCAGGCCCTCCCCCACGAGCTCTTCCAGGAGTTTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR GCA 90 bp CCGCACCAGAACGTTGCCAGGATGTGGGTCCGAGTGGATGAAGCCGGTGTAAAAGGCGCAGGAGGCTGGTaGCGTAGACACCCCGATACG +
Preference number: 4 (lower is better)
Translates to: PHQNVARMWVRVDEAGVKGAGGW*RRHPDT
Trigger: CGTATCGGGGTGTCTACGGCACCAGCCTCCTGCGCC...TTTTACACCGGCTTCATCCACTCGGACCCACATCCTGGCAACGTTCTGGTGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CCA 90 bp GGTGACACGCAGACATCACCTCCAAGTAGCCTGGGCTCTTCCACCCCTCGAAGGTCCTCCACAGGGGTGTaGGGCTGGAGAACCTTGGAG +
Preference number: 4 (lower is better)
Translates to: GDTQTSPPSSLGSSTPRRSSTGV*GWRTLE
Trigger: CTCCAAGGTTCTCCAGCCCCACACCCCTGTGGAGGA...CCTTCGAGGGGTGGAAGAGCCCAGGCTACTTGGAGGTGATGTCTGCGTGTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526833.2
ENST00000642585.1
CDS-3UTR CCA 90 bp GCTTGGCTCTGTGCACCTGTGCCAGGCTGGCGGCAGCAATTGGCTGGTAGTCAATCCTCCACAGGGGTGTaGGGCTGGAGAACCTTGGAG +
Preference number: 4 (lower is better)
Translates to: AWLCAPVPGWRQQLAGSQSSTGV*GWRTLE
Trigger: CTCCAAGGTTCTCCAGCCCCACACCCCTGTGGAGGA...TTGACTACCAGCCAATTGCTGCCGCCAGCCTGGCACAGGTGCACAGAGCCAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
CDS-3UTR CCA 90 bp CCTGGAAGAGCTCGTGGGGGAGGGCCTGGAAGTCCTCAAGGAACAACTCATCCACCCCCACTACCGCGGTaGAGAGCACCTTCCTCCACA +
Preference number: 4 (lower is better)
Translates to: PGRARGGGPGSPQGTTHPPPLPR*RAPSST
Trigger: TGTGGAGGAAGGTGCTCTCCACCGCGGTAGTGGGGG...TGGATGAGTTGTTCCTTGAGGACTTCCAGGCCCTCCCCCACGAGCTCTTCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
CDS-3UTR CCA 90 bp GGTAGTCAAACTCCTGGAAGAGCTCGTGGGGGAGGGCCTGGAAGTCCTCAAGGACCCCCACTACCGCGGTaGAGAGCACCTTCCTCCACA +
Preference number: 4 (lower is better)
Translates to: GSQTPGRARGGGPGSPQGPPLPR*RAPSST
Trigger: TGTGGAGGAAGGTGCTCTCCACCGCGGTAGTGGGGG...TCCTTGAGGACTTCCAGGCCCTCCCCCACGAGCTCTTCCAGGAGTTTGACTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
CDS-3UTR CCA 90 bp GCTTGGCTCTGTGCACCTGTGCCAGGCTGGCGGCAGCAATTGGCTGGTAGTCAAAACTCATCCACCTCCTaGAAGCCCCGCTTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: AWLCAPVPGWRQQLAGSQNSSTS*KPRLRA
Trigger: GGCCCTCAAGCGGGGCTTCCAGGAGGTGGATGAGTT...TTGACTACCAGCCAATTGCTGCCGCCAGCCTGGCACAGGTGCACAGAGCCAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
CDS-3UTR CCA 90 bp AGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACAGCCCCTCGTGGGGGAGGGCCTaGAAGTCCTCAAGGAACAAC +
Preference number: 4 (lower is better)
Translates to: RGVCGHYTASWPSCCHSPSWGRA*KSSRNN
Trigger: GTTGTTCCTTGAGGACTTCCAGGCCCTCCCCCACGA...GGGGCTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CCA 90 bp TCCTGGAAGAGCTCGTGGGGGAGGGCCTGGAAGTCCTCAAGGAACAACTCATCCTCCTGGAAGAGCTCGTaGGGGAGGGCCTGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: SWKSSWGRAWKSSRNNSSSWKSS*GRAWKS
Trigger: GGACTTCCAGGCCCTCCCCCACGAGCTCTTCCAGGA...GGATGAGTTGTTCCTTGAGGACTTCCAGGCCCTCCCCCACGAGCTCTTCCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
CDS-3UTR CCA 90 bp TTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACAGCTCCTGGAAGAGCTCGTaGGGGAGGGCCTGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: LRGVCGHYTASWPSCCHSSWKSS*GRAWKS
Trigger: GGACTTCCAGGCCCTCCCCCACGAGCTCTTCCAGGA...GCTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CCA 90 bp TCCTGGAAGAGCTCGTGGGGGAGGGCCTGGAAGTCCTCAAGGAACAACTCATCCGCACCTGTGCCAGGCTaGCGGCAGCAATTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: SWKSSWGRAWKSSRNNSSAPVPG*RQQLAG
Trigger: ACCAGCCAATTGCTGCCGCCAGCCTGGCACAGGTGC...GGATGAGTTGTTCCTTGAGGACTTCCAGGCCCTCCCCCACGAGCTCTTCCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
CDS-3UTR CCA 90 bp TTGCTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCATCTCCCAGACGACCTTaGCGTGGCGCAGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: LLERSVWSLHGLLAQLLSSPRRP*RGAGGW
Trigger: CCAGCCTCCTGCGCCACGCCAAGGTCGTCTGGGAGA...TGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CCA 90 bp CAGGCTGGCGGCAGCAATTGGCTGGTAGTCAAACTCCTGGAAGAGCTCGTGGGGCATTACACGGCCTCCTaGCCCAGCTGCTGTCACAGC +
Preference number: 4 (lower is better)
Translates to: QAGGSNWLVVKLLEELVGHYTAS*PSCCHS
Trigger: GCTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATG...CCCCACGAGCTCTTCCAGGAGTTTGACTACCAGCCAATTGCTGCCGCCAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CCA 90 bp ATGACCTCAACGAGCCGCAGCAGGAGCTCCAGGGTGTGGATGTCCCCATCAAAGCCCAGCCCACCTTGCTaGACTTGTCCCAGTGCACGC +
Preference number: 4 (lower is better)
Translates to: MTSTSRSRSSRVWMSPSKPSPPC*TCPSAR
Trigger: GCGTGCACTGGGACAAGTCCAGCAAGGTGGGCTGGG...CTTTGATGGGGACATCCACACCCTGGAGCTCCTGCTGCGGCTCGTTGAGGTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
3UTR CAA 72 bp TGGCTCTGTGCACCTGTGCCAGGCTGGCGGCAGCAATaGGCTGGTAGTCAAACTCCTGGAAGAGCTCGTGGG +
Preference number: 4 (lower is better)
Translates to: WLCAPVPGWRQQ*AGSQTPGRARG
Trigger: CCCACGAGCTCTTCCAGGAGTTTGACTACCAGCCAATTGCTGCCGCCAGCCTGGCACAGGTGCACAGAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
CDS-3UTR TCA 90 bp TGCTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACCAAAGCTGGGGTGCATaGCCTCAACGAGCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: CLRGVCGHYTASWPSCCHQSWGA*PQRAAA
Trigger: TGCTGCGGCTCGTTGAGGTCATGCACCCCAGCTTTG...GTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR TCA 90 bp CCGCACCAGAACGTTGCCAGGATGTGGGTCCGAGTGGATGAAGCCGGTGTAAAATGGCCTCCACATCGTTaGCCTTGCAGCCGGCGCAGA +
Preference number: 4 (lower is better)
Translates to: PHQNVARMWVRVDEAGVKWPPHR*PCSRRR
Trigger: TCTGCGCCGGCTGCAAGGTCAACGATGTGGAGGCCA...TTTTACACCGGCTTCATCCACTCGGACCCACATCCTGGCAACGTTCTGGTGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR TCA 90 bp TTGCTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCATGGCCTCCACATCGTTaGCCTTGCAGCCGGCGCAGA +
Preference number: 4 (lower is better)
Translates to: LLERSVWSLHGLLAQLLSWPPHR*PCSRRR
Trigger: TCTGCGCCGGCTGCAAGGTCAACGATGTGGAGGCCA...TGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR TCA 90 bp AGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACAGCCCCGCGCCACTTCAAACTTaGGCATCTCCCAGACGACCT +
Preference number: 4 (lower is better)
Translates to: RGVCGHYTASWPSCCHSPAPLQT*ASPRRP
Trigger: AGGTCGTCTGGGAGATGCTCAAGTTTGAAGTGGCGC...GGGGCTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR GCA 90 bp CACCCCTCGAAGGACAACATTGGTGCACCACCAGTAGTCCAGGGAGATCTGCAGGACGGCCAGGGCTTCTaGCTGCTGTGCAGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: HPSKDNIGAPPVVQGDLQDGQGF*LLCSRA
Trigger: TGCTCTGCTGCACAGCAGGCAGAAGCCCTGGCCGTC...CTGCAGATCTCCCTGGACTACTGGTGGTGCACCAATGTTGTCCTTCGAGGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526833.2
ENST00000533715.2
ENST00000642585.1
ENST00000644530.1
CDS-3UTR GCA 90 bp CCGCACCAGAACGTTGCCAGGATGTGGGTCCGAGTGGATGAAGCCGGTGTAAAATGCCAAAGCGCCCCATaGCATCCACCACGAGCCGCA +
Preference number: 4 (lower is better)
Translates to: PHQNVARMWVRVDEAGVKCQSAP*HPPRAA
Trigger: TGCGGCTCGTGGTGGATGGCATGGGGCGCTTTGGCA...TTTTACACCGGCTTCATCCACTCGGACCCACATCCTGGCAACGTTCTGGTGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR GCA 90 bp CACCCCTCGAAGGACAACATTGGTGCACCACCAGTAGTCCAGGGAGATCTGCAGTGCCAAAGCGCCCCATaGCATCCACCACGAGCCGCA +
Preference number: 4 (lower is better)
Translates to: HPSKDNIGAPPVVQGDLQCQSAP*HPPRAA
Trigger: TGCGGCTCGTGGTGGATGGCATGGGGCGCTTTGGCA...CTGCAGATCTCCCTGGACTACTGGTGGTGCACCAATGTTGTCCTTCGAGGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526833.2
ENST00000533715.2
ENST00000642585.1
ENST00000644530.1
CDS-3UTR GCA 90 bp TTGCTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCATGCCAAAGCGCCCCATaGCATCCACCACGAGCCGCA +
Preference number: 4 (lower is better)
Translates to: LLERSVWSLHGLLAQLLSCQSAP*HPPRAA
Trigger: TGCGGCTCGTGGTGGATGGCATGGGGCGCTTTGGCA...TGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR GCA 90 bp CAGGCTGGCGGCAGCAATTGGCTGGTAGTCAAACTCCTGGAAGAGCTCGTGGGGCGACCTTCAGAGACCTaGCAAAGCGCCCCATGCCAT +
Preference number: 4 (lower is better)
Translates to: QAGGSNWLVVKLLEELVGRPSET*QSAPCH
Trigger: ATGGCATGGGGCGCTTTGGCAGGTCTCTGAAGGTCG...CCCCACGAGCTCTTCCAGGAGTTTGACTACCAGCCAATTGCTGCCGCCAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
CDS-3UTR GCA 90 bp GTTGATAGCGCGCACGGTGTTGATGTTGCGCAGCACCAGCAGCATGGGCCGCGGGAAGGACAACATTGGTaGACCACCAGTAGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: VDSAHGVDVAQHQQHGPREGQHW*TTSSPG
Trigger: CCCTGGACTACTGGTGGTGCACCAATGTTGTCCTTC...CCGCGGCCCATGCTGCTGGTGCTGCGCAACATCAACACCGTGCGCGCTATCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR GCA 90 bp CTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACAGACGCTGGTGCCATCGTaGAGCTTGGCTCTGTGCACC +
Preference number: 4 (lower is better)
Translates to: LERSVWSLHGLLAQLLSQTLVPS*SLALCT
Trigger: GGTGCACAGAGCCAAGCTGCACGATGGCACCAGCGT...CTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR GCA 90 bp TTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACAGCTCACAGCCACGCTGGTaGCATCGTGCAGCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: LRGVCGHYTASWPSCCHSSQPRW*HRAAWL
Trigger: GAGCCAAGCTGCACGATGGCACCAGCGTGGCTGTGA...GCTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR GCA 90 bp AACAACTCATCCACCTCCTGGAAGCCCCGCTTGAGGGCCCTGTCCTCTAGCACGCACAGCGCTCTGCGTTaGGGCCCTCATTCTCGAAGT +
Preference number: 4 (lower is better)
Translates to: NNSSTSWKPRLRALSSSTHSALR*GPHSRS
Trigger: ACTTCGAGAATGAGGGCCGCAACGCAGAGCGCTGTG...CGTGCTAGAGGACAGGGCCCTCAAGCGGGGCTTCCAGGAGGTGGATGAGTTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR GCA 90 bp CGTGGGGGAGGGCCTGGAAGTCCTCAAGGAACAACTCATCCACCTCCTGGAAGCCACAGCGCTCTGCGTTaGGGCCCTCATTCTCGAAGT +
Preference number: 4 (lower is better)
Translates to: RGGGPGSPQGTTHPPPGSHSALR*GPHSRS
Trigger: ACTTCGAGAATGAGGGCCGCAACGCAGAGCGCTGTG...GCTTCCAGGAGGTGGATGAGTTGTTCCTTGAGGACTTCCAGGCCCTCCCCCACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR GCA 90 bp CTGCACCTTCACAGCCACGCTGGTGCCATCGTGCAGCTTGGCTCTGTGCACCTGTGCTATGTCATGCACTaGCAGCCCCTGGCTCCTGAT +
Preference number: 4 (lower is better)
Translates to: LHLHSHAGAIVQLGSVHLCYVMH*QPLAPD
Trigger: ATCAGGAGCCAGGGGCTGGCAGTGCATGACATAGCA...CAGGTGCACAGAGCCAAGCTGCACGATGGCACCAGCGTGGCTGTGAAGGTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR GCA 90 bp CGCGGTCCTTCTCCTCCAGGAACTGGTAGAGCCCGTGGTCCAGCAGCACCAGCTTTTTCTGCTATGTCATaGACTGCCAGCCCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: RGPSPPGTGRARGPAAPAFSAMS*TASPWL
Trigger: GAGCCAGGGGCTGGCAGTGCATGACATAGCAGAAAA...AGCTGGTGCTGCTGGACCACGGGCTCTACCAGTTCCTGGAGGAGAAGGACCGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR GCA 90 bp TCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCACCCTAGGTCTCTTGATGAGCTTTTCTaGTATGTCATGCACTGCCAG +
Preference number: 4 (lower is better)
Translates to: SAQGEKGPAGPGRLHPRSLDELF*YVMHCQ
Trigger: CTGGCAGTGCATGACATAGCAGAAAAGCTCATCAAG...AGACCTAGGGTGCAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR GCA 90 bp GGAGCACAGCCCCTGGCCCAGCTTCACGTAGAGGCCCCCGTTGCTGATGGCCCCCTTGATGAGCTTTTCTaGTATGTCATGCACTGCCAG +
Preference number: 4 (lower is better)
Translates to: GAQPLAQLHVEAPVADGPLDELF*YVMHCQ
Trigger: CTGGCAGTGCATGACATAGCAGAAAAGCTCATCAAG...GGGGCCATCAGCAACGGGGGCCTCTACGTGAAGCTGGGCCAGGGGCTGTGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR GCA 90 bp CTGGTGACACGCAGACATCACCTCCAAGTAGCCTGGGCTCTTCCACCCCTCGAATGGGGAGGCAAGGTCTaGCAAAGCGCCCCATGCCAT +
Preference number: 4 (lower is better)
Translates to: LVTRRHHLQVAWALPPLEWGGKV*QSAPCH
Trigger: ATGGCATGGGGCGCTTTGGCAGACCTTGCCTCCCCA...TTCGAGGGGTGGAAGAGCCCAGGCTACTTGGAGGTGATGTCTGCGTGTCACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000526833.2
ENST00000642585.1
CDS-3UTR CCA 90 bp CCCTGCCACCAGGGCATCAGCCGCCCGCTGGTGACACGCAGACATCACCTCCAACTCGAAGGACAACATTaGTGCACCACCAGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: PCHQGISRPLVTRRHHLQLEGQH*CTTSSP
Trigger: TGGACTACTGGTGGTGCACCAATGTTGTCCTTCGAG...TTGGAGGTGATGTCTGCGTGTCACCAGCGGGCGGCTGATGCCCTGGTGGCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526833.2
ENST00000533715.2
ENST00000642585.1
ENST00000644530.1
CDS-3UTR CCA 90 bp AGCCACGCTGGTGCCATCGTGCAGCTTGGCTCTGTGCACCTGTGCCAGGCTGGCCTCGAAGGACAACATTaGTGCACCACCAGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: SHAGAIVQLGSVHLCQAGLEGQH*CTTSSP
Trigger: TGGACTACTGGTGGTGCACCAATGTTGTCCTTCGAG...GCCAGCCTGGCACAGGTGCACAGAGCCAAGCTGCACGATGGCACCAGCGTGGCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
CDS-3UTR CCA 90 bp AGAGACCTGCCAAAGCGCCCCATGCCATCCACCACGAGCCGCATCCTCCTCTTCGCTGGCGGCAGCAATTaGCTGGTAGTCAAACTCCTG +
Preference number: 4 (lower is better)
Translates to: RDLPKRPMPSTTSRILLFAGGSN*LVVKLL
Trigger: CAGGAGTTTGACTACCAGCCAATTGCTGCCGCCAGC...GAAGAGGAGGATGCGGCTCGTGGTGGATGGCATGGGGCGCTTTGGCAGGTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533715.2
ENST00000644530.1
CDS-3UTR CCA 90 bp ACCTTCAGAGACCTGCCAAAGCGCCCCATGCCATCCACCACGAGCCGCATCCTCGCTGGCGGCAGCAATTaGCTGGTAGTCAAACTCCTG +
Preference number: 4 (lower is better)
Translates to: TFRDLPKRPMPSTTSRILAGGSN*LVVKLL
Trigger: CAGGAGTTTGACTACCAGCCAATTGCTGCCGCCAGC...GAGGATGCGGCTCGTGGTGGATGGCATGGGGCGCTTTGGCAGGTCTCTGAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533715.2
ENST00000644530.1
CDS-3UTR CCA 90 bp TTGCTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCAGCACCTGTGCCAGGCTaGCGGCAGCAATTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: LLERSVWSLHGLLAQLLSAPVPG*RQQLAG
Trigger: ACCAGCCAATTGCTGCCGCCAGCCTGGCACAGGTGC...TGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CCA 90 bp TGGCTGGTAGTCAAACTCCTGGAAGAGCTCGTGGGGGAGGGCCTGGAAGTCCTCTGCCATCGTGCAGCTTaGCTCTGTGCACCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: WLVVKLLEELVGEGLEVLCHRAA*LCAPVP
Trigger: TGGCACAGGTGCACAGAGCCAAGCTGCACGATGGCA...GAGGACTTCCAGGCCCTCCCCCACGAGCTCTTCCAGGAGTTTGACTACCAGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
CDS-3UTR CCA 90 bp GGTAGTCAAACTCCTGGAAGAGCTCGTGGGGGAGGGCCTGGAAGTCCTCAAGGACCTTCACAGCCACGCTaGTGCCATCGTGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: GSQTPGRARGGGPGSPQGPSQPR*CHRAAW
Trigger: CCAAGCTGCACGATGGCACCAGCGTGGCTGTGAAGG...TCCTTGAGGACTTCCAGGCCCTCCCCCACGAGCTCTTCCAGGAGTTTGACTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
CDS-3UTR CCA 90 bp CTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACAGCCTTCACAGCCACGCTaGTGCCATCGTGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: LERSVWSLHGLLAQLLSQPSQPR*CHRAAW
Trigger: CCAAGCTGCACGATGGCACCAGCGTGGCTGTGAAGG...CTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CCA 90 bp TGGCTGGTAGTCAAACTCCTGGAAGAGCTCGTGGGGGAGGGCCTGGAAGTCCTCAGGAGCTCCAGGGTGTaGATGTCCCCATCAAAGCGG +
Preference number: 4 (lower is better)
Translates to: WLVVKLLEELVGEGLEVLRSSRV*MSPSKR
Trigger: CCGCTTTGATGGGGACATCCACACCCTGGAGCTCCT...GAGGACTTCCAGGCCCTCCCCCACGAGCTCTTCCAGGAGTTTGACTACCAGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CCA 90 bp TGCTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACGTCCCCTTCAGGTCCTaGAGGACCCAGCTGAAGCCA +
Preference number: 4 (lower is better)
Translates to: CLRGVCGHYTASWPSCCHVPFRS*RTQLKP
Trigger: TGGCTTCAGCTGGGTCCTCCAGGACCTGAAGGGGAC...GTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR TCA 90 bp TCAAGGAACAACTCATCCACCTCCTGGAAGCCCCGCTTGAGGGCCCTGTCCTCTAGAGCAGAGTGGAAATaGCAGAGCTGCACCGGTCGC +
Preference number: 4 (lower is better)
Translates to: SRNNSSTSWKPRLRALSSRAEWK*QSCTGR
Trigger: GCGACCGGTGCAGCTCTGTCATTTCCACTCTGCTCT...AGAGGACAGGGCCCTCAAGCGGGGCTTCCAGGAGGTGGATGAGTTGTTCCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR TCA 90 bp CGTGGGGGAGGGCCTGGAAGTCCTCAAGGAACAACTCATCCACCTCCTGGAAGCGCGCCACTTCAAACTTaGGCATCTCCCAGACGACCT +
Preference number: 4 (lower is better)
Translates to: RGGGPGSPQGTTHPPPGSAPLQT*ASPRRP
Trigger: AGGTCGTCTGGGAGATGCTCAAGTTTGAAGTGGCGC...GCTTCCAGGAGGTGGATGAGTTGTTCCTTGAGGACTTCCAGGCCCTCCCCCACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR GCA 90 bp AGAGCTCGTGGGGGAGGGCCTGGAAGTCCTCAAGGAACAACTCATCCACCTCCTCGACCTTCAGAGACCTaGCAAAGCGCCCCATGCCAT +
Preference number: 4 (lower is better)
Translates to: RARGGGPGSPQGTTHPPPRPSET*QSAPCH
Trigger: ATGGCATGGGGCGCTTTGGCAGGTCTCTGAAGGTCG...AGGAGGTGGATGAGTTGTTCCTTGAGGACTTCCAGGCCCTCCCCCACGAGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
CDS-3UTR GCA 90 bp TTGCTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCAACGCTGGTGCCATCGTaGAGCTTGGCTCTGTGCACC +
Preference number: 4 (lower is better)
Translates to: LLERSVWSLHGLLAQLLSTLVPS*SLALCT
Trigger: GGTGCACAGAGCCAAGCTGCACGATGGCACCAGCGT...TGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR GCA 90 bp TGCTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACAAGCCAAAGCTGGGGTaGATGACCTCAACGAGCCGC +
Preference number: 4 (lower is better)
Translates to: CLRGVCGHYTASWPSCCHKPKLG*MTSTSR
Trigger: GCGGCTCGTTGAGGTCATGCACCCCAGCTTTGGCTT...GTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR GCA 90 bp CCTGGAAGAGCTCGTGGGGGAGGGCCTGGAAGTCCTCAAGGAACAACTCATCCAAAGCCAAAGCTGGGGTaGATGACCTCAACGAGCCGC +
Preference number: 4 (lower is better)
Translates to: PGRARGGGPGSPQGTTHPKPKLG*MTSTSR
Trigger: GCGGCTCGTTGAGGTCATGCACCCCAGCTTTGGCTT...TGGATGAGTTGTTCCTTGAGGACTTCCAGGCCCTCCCCCACGAGCTCTTCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR GCA 90 bp AGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACAGCCCCTTTTCTGCTATGTCATaGACTGCCAGCCCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: RGVCGHYTASWPSCCHSPFSAMS*TASPWL
Trigger: GAGCCAGGGGCTGGCAGTGCATGACATAGCAGAAAA...GGGGCTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CCA 90 bp CACCCCTCGAAGGACAACATTGGTGCACCACCAGTAGTCCAGGGAGATCTGCAGGGGGCTGGAGAACCTTaGAGGAAGGCCCCTGACGTT +
Preference number: 4 (lower is better)
Translates to: HPSKDNIGAPPVVQGDLQGAGEP*RKAPDV
Trigger: AACGTCAGGGGCCTTCCTCCAAGGTTCTCCAGCCCC...CTGCAGATCTCCCTGGACTACTGGTGGTGCACCAATGTTGTCCTTCGAGGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000526833.2
ENST00000533715.2
ENST00000642585.1
ENST00000644530.1
CDS-3UTR CCA 90 bp TTGCTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCAAACTCATCCACCTCCTaGAAGCCCCGCTTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: LLERSVWSLHGLLAQLLSNSSTS*KPRLRA
Trigger: GGCCCTCAAGCGGGGCTTCCAGGAGGTGGATGAGTT...TGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CCA 90 bp CTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACAGTCGTGGGGGAGGGCCTaGAAGTCCTCAAGGAACAAC +
Preference number: 4 (lower is better)
Translates to: LERSVWSLHGLLAQLLSQSWGRA*KSSRNN
Trigger: GTTGTTCCTTGAGGACTTCCAGGCCCTCCCCCACGA...CTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CCA 90 bp GAGGGCCTGGAAGTCCTCAAGGAACAACTCATCCACCTCCTGGAAGCCCCGCTTTGCCATCGTGCAGCTTaGCTCTGTGCACCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: EGLEVLKEQLIHLLEAPLCHRAA*LCAPVP
Trigger: TGGCACAGGTGCACAGAGCCAAGCTGCACGATGGCA...AAGCGGGGCTTCCAGGAGGTGGATGAGTTGTTCCTTGAGGACTTCCAGGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
CDS-3UTR CCA 90 bp TGCTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACAGGAGCTCCAGGGTGTaGATGTCCCCATCAAAGCGG +
Preference number: 4 (lower is better)
Translates to: CLRGVCGHYTASWPSCCHRSSRV*MSPSKR
Trigger: CCGCTTTGATGGGGACATCCACACCCTGGAGCTCCT...GTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CCA 90 bp GTCCGAGTGGATGAAGCCGGTGTAAAATATCTGCTCAGCAAAGGCCTTGATGAGCTGCGTGCGCCCTCATaGCGGCGTCGTCCCGCAGGA +
Preference number: 4 (lower is better)
Translates to: VRVDEAGVKYLLSKGLDELRAPS*RRRPAG
Trigger: TCCTGCGGGACGACGCCGCCATGAGGGCGCACGCAG...CTCATCAAGGCCTTTGCTGAGCAGATATTTTACACCGGCTTCATCCACTCGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CCA 90 bp GTGACACGCAGACATCACCTCCAAGTAGCCTGGGCTCTTCCACCCCTCGAAGGACACCTCCAAGTAGCCTaGGCTCTTCCACCCCTCGAA +
Preference number: 4 (lower is better)
Translates to: VTRRHHLQVAWALPPLEGHLQVA*ALPPLE
Trigger: TTCGAGGGGTGGAAGAGCCCAGGCTACTTGGAGGTG...TCCTTCGAGGGGTGGAAGAGCCCAGGCTACTTGGAGGTGATGTCTGCGTGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526833.2
ENST00000642585.1
CDS-3UTR CCA 90 bp ATGTCCCCATCAAAGCGGTCCCGCAGGTCGATGTACTGCACCTTCACAGCCACGCACCTCCAAGTAGCCTaGGCTCTTCCACCCCTCGAA +
Preference number: 4 (lower is better)
Translates to: MSPSKRSRRSMYCTFTATHLQVA*ALPPLE
Trigger: TTCGAGGGGTGGAAGAGCCCAGGCTACTTGGAGGTG...CGTGGCTGTGAAGGTGCAGTACATCGACCTGCGGGACCGCTTTGATGGGGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CCA 90 bp CTGGTGACACGCAGACATCACCTCCAAGTAGCCTGGGCTCTTCCACCCCTCGAACACCTCCAAGTAGCCTaGGCTCTTCCACCCCTCGAA +
Preference number: 4 (lower is better)
Translates to: LVTRRHHLQVAWALPPLEHLQVA*ALPPLE
Trigger: TTCGAGGGGTGGAAGAGCCCAGGCTACTTGGAGGTG...TTCGAGGGGTGGAAGAGCCCAGGCTACTTGGAGGTGATGTCTGCGTGTCACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526833.2
ENST00000642585.1
CDS-3UTR CCA 90 bp CCTGGAAGAGCTCGTGGGGGAGGGCCTGGAAGTCCTCAAGGAACAACTCATCCACACCTCCAAGTAGCCTaGGCTCTTCCACCCCTCGAA +
Preference number: 4 (lower is better)
Translates to: PGRARGGGPGSPQGTTHPHLQVA*ALPPLE
Trigger: TTCGAGGGGTGGAAGAGCCCAGGCTACTTGGAGGTG...TGGATGAGTTGTTCCTTGAGGACTTCCAGGCCCTCCCCCACGAGCTCTTCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR TCA 90 bp TTGCTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCAAGAGCAGAGTGGAAATaGCAGAGCTGCACCGGTCGC +
Preference number: 4 (lower is better)
Translates to: LLERSVWSLHGLLAQLLSRAEWK*QSCTGR
Trigger: GCGACCGGTGCAGCTCTGTCATTTCCACTCTGCTCT...TGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR TCA 90 bp AGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACAGCCCCGTGGGTCCGAGTGGATaGAGCCGGTGTAAAATATCT +
Preference number: 4 (lower is better)
Translates to: RGVCGHYTASWPSCCHSPVGPSG*SRCKIS
Trigger: AGATATTTTACACCGGCTTCATCCACTCGGACCCAC...GGGGCTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR TCA 90 bp TGCTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACGCGCCACTTCAAACTTaGGCATCTCCCAGACGACCT +
Preference number: 4 (lower is better)
Translates to: CLRGVCGHYTASWPSCCHAPLQT*ASPRRP
Trigger: AGGTCGTCTGGGAGATGCTCAAGTTTGAAGTGGCGC...GTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR TCA 90 bp CGTGGGGGAGGGCCTGGAAGTCCTCAAGGAACAACTCATCCACCTCCTGGAAGCAGGCGGAGATTGCAGTaGGCCAAGATTGAGACACTG +
Preference number: 4 (lower is better)
Translates to: RGGGPGSPQGTTHPPPGSRRRLQ*AKIETL
Trigger: CAGTGTCTCAATCTTGGCTCACTGCAATCTCCGCCT...GCTTCCAGGAGGTGGATGAGTTGTTCCTTGAGGACTTCCAGGCCCTCCCCCACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533715.2
ENST00000644530.1
CDS-3UTR GCA 90 bp CTCTTCCACCCCTCGAAGGACAACATTGGTGCACCACCAGTAGTCCAGGGAGATCTTCTCCCGTGCCTCTaGCATGACATAGCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: LFHPSKDNIGAPPVVQGDLLPCL*HDIAGS
Trigger: GGAGCCCGCTATGTCATGGCAGAGGCACGGGAGAAG...ATCTCCCTGGACTACTGGTGGTGCACCAATGTTGTCCTTCGAGGGGTGGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526833.2
ENST00000533715.2
ENST00000642585.1
ENST00000644530.1
CDS-3UTR GCA 90 bp TTGCTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACGACCTTCAGAGACCTaGCAAAGCGCCCCATGCCAT +
Preference number: 4 (lower is better)
Translates to: LLERSVWSLHGLLAQLLSRPSET*QSAPCH
Trigger: ATGGCATGGGGCGCTTTGGCAGGTCTCTGAAGGTCG...TGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR GCA 90 bp GGTGACACGCAGACATCACCTCCAAGTAGCCTGGGCTCTTCCACCCCTCGAAGGGAAGGACAACATTGGTaGACCACCAGTAGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: GDTQTSPPSSLGSSTPRREGQHW*TTSSPG
Trigger: CCCTGGACTACTGGTGGTGCACCAATGTTGTCCTTC...CCTTCGAGGGGTGGAAGAGCCCAGGCTACTTGGAGGTGATGTCTGCGTGTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526833.2
ENST00000642585.1
CDS-3UTR GCA 90 bp CTCTTCCACCCCTCGAAGGACAACATTGGTGCACCACCAGTAGTCCAGGGAGATTCACAGCCACGCTGGTaGCATCGTGCAGCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: LFHPSKDNIGAPPVVQGDSQPRW*HRAAWL
Trigger: GAGCCAAGCTGCACGATGGCACCAGCGTGGCTGTGA...ATCTCCCTGGACTACTGGTGGTGCACCAATGTTGTCCTTCGAGGGGTGGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533715.2
ENST00000644530.1
CDS-3UTR GCA 90 bp CCGCACCAGAACGTTGCCAGGATGTGGGTCCGAGTGGATGAAGCCGGTGTAAAAAAGCCAAAGCTGGGGTaGATGACCTCAACGAGCCGC +
Preference number: 4 (lower is better)
Translates to: PHQNVARMWVRVDEAGVKKPKLG*MTSTSR
Trigger: GCGGCTCGTTGAGGTCATGCACCCCAGCTTTGGCTT...TTTTACACCGGCTTCATCCACTCGGACCCACATCCTGGCAACGTTCTGGTGCGG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR GCA 90 bp TTGCTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACACAGCGCTCTGCGTTaGGGCCCTCATTCTCGAAGT +
Preference number: 4 (lower is better)
Translates to: LLERSVWSLHGLLAQLLSHSALR*GPHSRS
Trigger: ACTTCGAGAATGAGGGCCGCAACGCAGAGCGCTGTG...TGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR GCA 90 bp TTGCTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCATCCGCACCAGAACGTTaGCAGGATGTGGGTCCGAGT +
Preference number: 4 (lower is better)
Translates to: LLERSVWSLHGLLAQLLSSAPER*QDVGPS
Trigger: ACTCGGACCCACATCCTGGCAACGTTCTGGTGCGGA...TGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR GCA 90 bp AGCAATTGGCTGGTAGTCAAACTCCTGGAAGAGCTCGTGGGGGAGGGCCTGGAACCAAGATTGAGACACTaGACTCCAGCCGGTCGCCAC +
Preference number: 4 (lower is better)
Translates to: SNWLVVKLLEELVGEGLEPRLRH*TPAGRH
Trigger: GTGGCGACCGGCTGGAGTGCAGTGTCTCAATCTTGG...TTCCAGGCCCTCCCCCACGAGCTCTTCCAGGAGTTTGACTACCAGCCAATTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533715.2
ENST00000644530.1
CDS-3UTR CCA 90 bp TTGCTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCATCGTGGGGGAGGGCCTaGAAGTCCTCAAGGAACAAC +
Preference number: 4 (lower is better)
Translates to: LLERSVWSLHGLLAQLLSSWGRA*KSSRNN
Trigger: GTTGTTCCTTGAGGACTTCCAGGCCCTCCCCCACGA...TGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CCA 90 bp TTGCTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCATGCCATCGTGCAGCTTaGCTCTGTGCACCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: LLERSVWSLHGLLAQLLSCHRAA*LCAPVP
Trigger: TGGCACAGGTGCACAGAGCCAAGCTGCACGATGGCA...TGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CCA 90 bp CTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACAGAACGTTGCCAGGATGTaGGTCCGAGTGGATGAAGCC +
Preference number: 4 (lower is better)
Translates to: LERSVWSLHGLLAQLLSQNVARM*VRVDEA
Trigger: GGCTTCATCCACTCGGACCCACATCCTGGCAACGTT...CTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CCA 90 bp AGGTCGATGTACTGCACCTTCACAGCCACGCTGGTGCCATCGTGCAGCTTGGCTAACGTTGCCAGGATGTaGGTCCGAGTGGATGAAGCC +
Preference number: 4 (lower is better)
Translates to: RSMYCTFTATLVPSCSLANVARM*VRVDEA
Trigger: GGCTTCATCCACTCGGACCCACATCCTGGCAACGTT...AGCCAAGCTGCACGATGGCACCAGCGTGGCTGTGAAGGTGCAGTACATCGACCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CCA 90 bp GAGGGCCACGTTGATAGCGCGCACGGTGTTGATGTTGCGCAGCACCAGCAGCATCTTGAGAGGAGTGTGTaGTCATTACACGGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: EGHVDSAHGVDVAQHQQHLERSV*SLHGLL
Trigger: CAGGAGGCCGTGTAATGACCACACACTCCTCTCAAG...ATGCTGCTGGTGCTGCGCAACATCAACACCGTGCGCGCTATCAACGTGGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR TCA 90 bp GTCCGAGTGGATGAAGCCGGTGTAAAATATCTGCTCAGCAAAGGCCTTGATGAGGCACGGGGCGCTGCATaGGCATCTCGGCGAACAGGA +
Preference number: 4 (lower is better)
Translates to: VRVDEAGVKYLLSKGLDEARGAA*ASRRTG
Trigger: TCCTGTTCGCCGAGATGCTCATGCAGCGCCCCGTGC...CTCATCAAGGCCTTTGCTGAGCAGATATTTTACACCGGCTTCATCCACTCGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR GCA 90 bp AGCAATTGGCTGGTAGTCAAACTCCTGGAAGAGCTCGTGGGGGAGGGCCTGGAATGCTATGTCATGCACTaGCAGCCCCTGGCTCCTGAT +
Preference number: 4 (lower is better)
Translates to: SNWLVVKLLEELVGEGLECYVMH*QPLAPD
Trigger: ATCAGGAGCCAGGGGCTGGCAGTGCATGACATAGCA...TTCCAGGCCCTCCCCCACGAGCTCTTCCAGGAGTTTGACTACCAGCCAATTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR GCA 90 bp TTGCTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCATGCTATGTCATGCACTaGCAGCCCCTGGCTCCTGAT +
Preference number: 4 (lower is better)
Translates to: LLERSVWSLHGLLAQLLSCYVMH*QPLAPD
Trigger: ATCAGGAGCCAGGGGCTGGCAGTGCATGACATAGCA...TGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR GCA 90 bp TTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACAGCTTTTCTGCTATGTCATaGACTGCCAGCCCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: LRGVCGHYTASWPSCCHSFSAMS*TASPWL
Trigger: GAGCCAGGGGCTGGCAGTGCATGACATAGCAGAAAA...GCTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CCA 90 bp CGTGGGGGAGGGCCTGGAAGTCCTCAAGGAACAACTCATCCACCTCCTGGAAGCCTCGAAGGACAACATTaGTGCACCACCAGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: RGGGPGSPQGTTHPPPGSLEGQH*CTTSSP
Trigger: TGGACTACTGGTGGTGCACCAATGTTGTCCTTCGAG...GCTTCCAGGAGGTGGATGAGTTGTTCCTTGAGGACTTCCAGGCCCTCCCCCACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
CDS-3UTR CCA 90 bp CAGGAGCTCCAGGGTGTGGATGTCCCCATCAAAGCGGTCCCGCAGGTCGATGTACTCGAAGGACAACATTaGTGCACCACCAGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: QELQGVDVPIKAVPQVDVLEGQH*CTTSSP
Trigger: TGGACTACTGGTGGTGCACCAATGTTGTCCTTCGAG...TACATCGACCTGCGGGACCGCTTTGATGGGGACATCCACACCCTGGAGCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CCA 90 bp CTCTTCCACCCCTCGAAGGACAACATTGGTGCACCACCAGTAGTCCAGGGAGATTCGTGGGGGAGGGCCTaGAAGTCCTCAAGGAACAAC +
Preference number: 4 (lower is better)
Translates to: LFHPSKDNIGAPPVVQGDSWGRA*KSSRNN
Trigger: GTTGTTCCTTGAGGACTTCCAGGCCCTCCCCCACGA...ATCTCCCTGGACTACTGGTGGTGCACCAATGTTGTCCTTCGAGGGGTGGAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000533715.2
ENST00000644530.1
CDS-3UTR TCA 90 bp AGAGCTCGTGGGGGAGGGCCTGGAAGTCCTCAAGGAACAACTCATCCACCTCCTGTGGGTCCGAGTGGATaGAGCCGGTGTAAAATATCT +
Preference number: 4 (lower is better)
Translates to: RARGGGPGSPQGTTHPPPVGPSG*SRCKIS
Trigger: AGATATTTTACACCGGCTTCATCCACTCGGACCCAC...AGGAGGTGGATGAGTTGTTCCTTGAGGACTTCCAGGCCCTCCCCCACGAGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR TCA 90 bp TGCTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACGTGGGTCCGAGTGGATaGAGCCGGTGTAAAATATCT +
Preference number: 4 (lower is better)
Translates to: CLRGVCGHYTASWPSCCHVGPSG*SRCKIS
Trigger: AGATATTTTACACCGGCTTCATCCACTCGGACCCAC...GTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR TCA 90 bp CTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACAGGTGGGTCCGAGTGGATaGAGCCGGTGTAAAATATCT +
Preference number: 4 (lower is better)
Translates to: LERSVWSLHGLLAQLLSQVGPSG*SRCKIS
Trigger: AGATATTTTACACCGGCTTCATCCACTCGGACCCAC...CTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR TCA 90 bp AGCAATTGGCTGGTAGTCAAACTCCTGGAAGAGCTCGTGGGGGAGGGCCTGGAAAGGCGGAGATTGCAGTaGGCCAAGATTGAGACACTG +
Preference number: 4 (lower is better)
Translates to: SNWLVVKLLEELVGEGLERRRLQ*AKIETL
Trigger: CAGTGTCTCAATCTTGGCTCACTGCAATCTCCGCCT...TTCCAGGCCCTCCCCCACGAGCTCTTCCAGGAGTTTGACTACCAGCCAATTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533715.2
ENST00000644530.1
CDS-3UTR GCA 90 bp GCCTGGGCTGTTCTCTTCCACCCCTCGAAGGACAACATTGGTGCACCACCAGTAGAAGGACAACATTGGTaGACCACCAGTAGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: AWAVLFHPSKDNIGAPPVEGQHW*TTSSPG
Trigger: CCCTGGACTACTGGTGGTGCACCAATGTTGTCCTTC...TACTGGTGGTGCACCAATGTTGTCCTTCGAGGGGTGGAAGAGAACAGCCCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533715.2
ENST00000644530.1
CDS-3UTR GCA 90 bp AGTCAAACTCCTGGAAGAGCTCGTGGGGGAGGGCCTGGAAGTCCTCAAGGAACAGAAGGACAACATTGGTaGACCACCAGTAGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: SQTPGRARGGGPGSPQGTEGQHW*TTSSPG
Trigger: CCCTGGACTACTGGTGGTGCACCAATGTTGTCCTTC...TGTTCCTTGAGGACTTCCAGGCCCTCCCCCACGAGCTCTTCCAGGAGTTTGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
CDS-3UTR GCA 90 bp TTGCTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCAGAAGGACAACATTGGTaGACCACCAGTAGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LLERSVWSLHGLLAQLLSEGQHW*TTSSPG
Trigger: CCCTGGACTACTGGTGGTGCACCAATGTTGTCCTTC...TGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR GCA 90 bp CGAGTGGATGAAGCCGGTGTAAAATATCTGCTCAGCAAAGGCCTTGATGAGCTTGGCGCAGGAGGCTGGTaGCGTAGACACCCCGATACG +
Preference number: 4 (lower is better)
Translates to: RVDEAGVKYLLSKGLDELGAGGW*RRHPDT
Trigger: CGTATCGGGGTGTCTACGGCACCAGCCTCCTGCGCC...AAGCTCATCAAGGCCTTTGCTGAGCAGATATTTTACACCGGCTTCATCCACTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CCA 90 bp CTGGTGACACGCAGACATCACCTCCAAGTAGCCTGGGCTCTTCCACCCCTCGAACTCGAAGGACAACATTaGTGCACCACCAGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: LVTRRHHLQVAWALPPLELEGQH*CTTSSP
Trigger: TGGACTACTGGTGGTGCACCAATGTTGTCCTTCGAG...TTCGAGGGGTGGAAGAGCCCAGGCTACTTGGAGGTGATGTCTGCGTGTCACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526833.2
ENST00000642585.1
CDS-3UTR CCA 90 bp CTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACAGCTCGAAGGACAACATTaGTGCACCACCAGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: LERSVWSLHGLLAQLLSQLEGQH*CTTSSP
Trigger: TGGACTACTGGTGGTGCACCAATGTTGTCCTTCGAG...CTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CCA 90 bp CGAGTGGATGAAGCCGGTGTAAAATATCTGCTCAGCAAAGGCCTTGATGAGCTTTCTCCCAGACGACCTTaGCGTGGCGCAGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: RVDEAGVKYLLSKGLDELSPRRP*RGAGGW
Trigger: CCAGCCTCCTGCGCCACGCCAAGGTCGTCTGGGAGA...AAGCTCATCAAGGCCTTTGCTGAGCAGATATTTTACACCGGCTTCATCCACTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CCA 90 bp TCCTGGAAGAGCTCGTGGGGGAGGGCCTGGAAGTCCTCAAGGAACAACTCATCCGTAATCCCAGGTAGTTaGGAGGCTGAGACAGGAGAA +
Preference number: 4 (lower is better)
Translates to: SWKSSWGRAWKSSRNNSSVIPGS*EAETGE
Trigger: TTCTCCTGTCTCAGCCTCCCAACTACCTGGGATTAC...GGATGAGTTGTTCCTTGAGGACTTCCAGGCCCTCCCCCACGAGCTCTTCCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533715.2
ENST00000644530.1
CDS-3UTR TCA 90 bp CGAGTGGATGAAGCCGGTGTAAAATATCTGCTCAGCAAAGGCCTTGATGAGCTTTGGCCTCCACATCGTTaGCCTTGCAGCCGGCGCAGA +
Preference number: 4 (lower is better)
Translates to: RVDEAGVKYLLSKGLDELWPPHR*PCSRRR
Trigger: TCTGCGCCGGCTGCAAGGTCAACGATGTGGAGGCCA...AAGCTCATCAAGGCCTTTGCTGAGCAGATATTTTACACCGGCTTCATCCACTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR GCA 90 bp GTCCGAGTGGATGAAGCCGGTGTAAAATATCTGCTCAGCAAAGGCCTTGATGAGTGGCCCAGCCCACCTTaGTGGACTTGTCCCAGTGCA +
Preference number: 4 (lower is better)
Translates to: VRVDEAGVKYLLSKGLDEWPSPP*WTCPSA
Trigger: TGCACTGGGACAAGTCCAGCAAGGTGGGCTGGGCCA...CTCATCAAGGCCTTTGCTGAGCAGATATTTTACACCGGCTTCATCCACTCGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CCA 90 bp GGACAACATTGGTGCACCACCAGTAGTCCAGGGAGATCTGCAGGCCGACCTTCAGTAATCCCAGGTAGTTaGGAGGCTGAGACAGGAGAA +
Preference number: 4 (lower is better)
Translates to: GQHWCTTSSPGRSAGRPSVIPGS*EAETGE
Trigger: TTCTCCTGTCTCAGCCTCCCAACTACCTGGGATTAC...TGAAGGTCGGCCTGCAGATCTCCCTGGACTACTGGTGGTGCACCAATGTTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533715.2
ENST00000644530.1
CDS-3UTR GCA 90 bp CTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACAGCTTGATGAGCTTTTCTaGTATGTCATGCACTGCCAG +
Preference number: 4 (lower is better)
Translates to: LERSVWSLHGLLAQLLSQLDELF*YVMHCQ
Trigger: CTGGCAGTGCATGACATAGCAGAAAAGCTCATCAAG...CTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR GCA 90 bp TGCTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACCTTGATGAGCTTTTCTaGTATGTCATGCACTGCCAG +
Preference number: 4 (lower is better)
Translates to: CLRGVCGHYTASWPSCCHLDELF*YVMHCQ
Trigger: CTGGCAGTGCATGACATAGCAGAAAAGCTCATCAAG...GTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CCA 90 bp GTCCGAGTGGATGAAGCCGGTGTAAAATATCTGCTCAGCAAAGGCCTTGATGAGCTCGAAGGACAACATTaGTGCACCACCAGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: VRVDEAGVKYLLSKGLDELEGQH*CTTSSP
Trigger: TGGACTACTGGTGGTGCACCAATGTTGTCCTTCGAG...CTCATCAAGGCCTTTGCTGAGCAGATATTTTACACCGGCTTCATCCACTCGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CAA 90 bp CCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCACACGCGCTTGCTGGACTaGTCCCAGTGCACGCGGGGC +
Preference number: 5 (lower is better)
Translates to: PPPSAQGEKGPAGPGRLHTRLLD*SQCTRG
Trigger: GCCCCGCGTGCACTGGGACAAGTCCAGCAAGCGCGT...GTGCAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308860.11
ENST00000645968.2
CDS-3UTR CAA 90 bp CCGCCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGGCACAGCGCTCTGCGTaGCGGCCCTCATTCTCGAAG +
Preference number: 5 (lower is better)
Translates to: PPPPSAQGEKGPAGPGRLAQRSA*RPSFSK
Trigger: CTTCGAGAATGAGGGCCGCAACGCAGAGCGCTGTGC...CAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CAA 90 bp CGCCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCGCAGTGAGCACGCGCTaGCTGGACTTGTCCCAGTGC +
Preference number: 5 (lower is better)
Translates to: RHLRQPKVKRAPPALGGCAVSTR*LDLSQC
Trigger: GCACTGGGACAAGTCCAGCAAGCGCGTGCTCACTGC...GCAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308860.11
ENST00000645968.2
CDS-3UTR CAA 90 bp CGCCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCGAACAGGAGGTAGTCTaGCACCCCCAGTGCGGCTGC +
Preference number: 5 (lower is better)
Translates to: RHLRQPKVKRAPPALGGCEQEVV*HPQCGC
Trigger: GCAGCCGCACTGGGGGTGCAAGACTACCTCCTGTTC...GCAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CAA 90 bp CGCCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCTCCACATCGTTGACCTaGCAGCCGGCGCAGAAGTCG +
Preference number: 5 (lower is better)
Translates to: RHLRQPKVKRAPPALGGCSTSLT*QPAQKS
Trigger: CGACTTCTGCGCCGGCTGCAAGGTCAACGATGTGGA...GCAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CAA 90 bp CCGCCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCGCACGGTGTTGATGTaGCGCAGCACCAGCAGCATG +
Preference number: 5 (lower is better)
Translates to: PPPPSAQGEKGPAGPGRLRTVLM*RSTSSM
Trigger: CATGCTGCTGGTGCTGCGCAACATCAACACCGTGCG...CAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS TCA 90 bp CATCCACCACGAGCCGCATCCTCCTCTTCTCCCGTGCCTCTGCCATaGCATAGCGGGCTCCGAGGAGCAGGGGCGCCCCCACTACCGCGG +
Preference number: 5 (lower is better)
Translates to: HPPRAASSSSPVPLP*HSGLRGAGAPPLPR
Trigger: CCGCGGTAGTGGGGGCGCCCCTGCTCCTCGGAGCCCGCTATGTCATGGCAGAGGCACGGGAGAAGAGGAGGATGCGGCTCGTGGTGGATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000308860.11
ENST00000526231.6
ENST00000526833.2
ENST00000529654.5
ENST00000532190.2
ENST00000533715.2
ENST00000534714.5
ENST00000642585.1
ENST00000643493.1
ENST00000644530.1
ENST00000645307.1
ENST00000645946.1
ENST00000645968.2
ENST00000646054.1
CDS GCA 90 bp GCGCACTGCGCATTCCCCGGGCAGGCACCTCACCGTCCCCGAACATaGCAGGGATCCTCGGGCGCCAACACGGGTCCTGGCACTTACTGC +
Preference number: 5 (lower is better)
Translates to: AHCAFPGQAPHRPRT*QGSSGANTGPGTYC
Trigger: GCAGTAAGTGCCAGGACCCGTGTTGGCGCCCGAGGATCCCTGGCATGTTCGGGGACGGTGAGGTGCCTGCCCGGGGAATGCGCAGTGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534714.5
ENST00000645946.1
CDS-3UTR CAA 90 bp CCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCACTCCACATCGTTGACCTaGCAGCCGGCGCAGAAGTCG +
Preference number: 5 (lower is better)
Translates to: PPPSAQGEKGPAGPGRLHSTSLT*QPAQKS
Trigger: CGACTTCTGCGCCGGCTGCAAGGTCAACGATGTGGA...GTGCAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CAA 90 bp GTGGCGCAGGAGGCTGGTGCCGTAGACACCCCGATACGTGGCGCCCGCCAGGCGATAGCGCGCACGGTGTaGATGTTGCGCAGCACCAGC +
Preference number: 5 (lower is better)
Translates to: VAQEAGAVDTPIRGARQAIARTV*MLRSTS
Trigger: GCTGGTGCTGCGCAACATCAACACCGTGCGCGCTAT...CGCCTGGCGGGCGCCACGTATCGGGGTGTCTACGGCACCAGCCTCCTGCGCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CAA 90 bp GCTGATGGCCCCTGCCACCAGGGCATCAGCCGCCCGCTGGTGACACGCAGACATTCCTGGAAGCCCCGCTaGAGGGCCCTGTCCTCTAGC +
Preference number: 5 (lower is better)
Translates to: ADGPCHQGISRPLVTRRHSWKPR*RALSSS
Trigger: GCTAGAGGACAGGGCCCTCAAGCGGGGCTTCCAGGA...ATGTCTGCGTGTCACCAGCGGGCGGCTGATGCCCTGGTGGCAGGGGCCATCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526833.2
ENST00000533715.2
ENST00000642585.1
ENST00000644530.1
CDS-3UTR CAA 90 bp CTCATGGCGGCGTCGTCCCGCAGGATGATGGCCCGCCACAGCTGGCAGAGGGCTGTGCCATCGTGCAGCTaGGCTCTGTGCACCTGTGCC +
Preference number: 5 (lower is better)
Translates to: LMAASSRRMMARHSWQRAVPSCS*ALCTCA
Trigger: GGCACAGGTGCACAGAGCCAAGCTGCACGATGGCAC...AGCCCTCTGCCAGCTGTGGCGGGCCATCATCCTGCGGGACGACGCCGCCATGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CAA 90 bp TCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCACCCTAGGTCTATGGCCTCCACATCGTaGACCTTGCAGCCGGCGCAG +
Preference number: 5 (lower is better)
Translates to: SAQGEKGPAGPGRLHPRSMASTS*TLQPAQ
Trigger: CTGCGCCGGCTGCAAGGTCAACGATGTGGAGGCCAT...AGACCTAGGGTGCAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CAA 90 bp CGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCACCCTAGGTCGCACGGTGTTGATGTaGCGCAGCACCAGCAGCATG +
Preference number: 5 (lower is better)
Translates to: RQPKVKRAPPALGGCTLGRTVLM*RSTSSM
Trigger: CATGCTGCTGGTGCTGCGCAACATCAACACCGTGCG...ACCTAGGGTGCAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CAA 90 bp CAGCCACGCTGGTGCCATCGTGCAGCTTGGCTCTGTGCACCTGTGCCAGGCTGGGCGCCGAGGGCCACGTaGATAGCGCGCACGGTGTTG +
Preference number: 5 (lower is better)
Translates to: QPRWCHRAAWLCAPVPGWAPRAT*IARTVL
Trigger: CAACACCGTGCGCGCTATCAACGTGGCCCTCGGCGC...CCAGCCTGGCACAGGTGCACAGAGCCAAGCTGCACGATGGCACCAGCGTGGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS GCA 90 bp CATGCCATCCACCACGAGCCGCATCCTCCTCTTCTCCCGTGCCTCTaGCATGACATAGCGGGCTCCGAGGAGCAGGGGCGCCCCCACTAC +
Preference number: 5 (lower is better)
Translates to: HAIHHEPHPPLLPCL*HDIAGSEEQGRPHY
Trigger: GTAGTGGGGGCGCCCCTGCTCCTCGGAGCCCGCTATGTCATGGCAGAGGCACGGGAGAAGAGGAGGATGCGGCTCGTGGTGGATGGCATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000308860.11
ENST00000526231.6
ENST00000526833.2
ENST00000529654.5
ENST00000532190.2
ENST00000533715.2
ENST00000534714.5
ENST00000642585.1
ENST00000643493.1
ENST00000644530.1
ENST00000645307.1
ENST00000645946.1
ENST00000645968.2
ENST00000646054.1
CDS-3UTR CAA 90 bp TGGAAGCCCCGCTTGAGGGCCCTGTCCTCTAGCACGCGCAGGGTCCGGGTATACTCCTGGAAGCCCCGCTaGAGGGCCCTGTCCTCTAGC +
Preference number: 5 (lower is better)
Translates to: WKPRLRALSSSTRRVRVYSWKPR*RALSSS
Trigger: GCTAGAGGACAGGGCCCTCAAGCGGGGCTTCCAGGA...GTATACCCGGACCCTGCGCGTGCTAGAGGACAGGGCCCTCAAGCGGGGCTTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000526833.2
ENST00000529654.5
ENST00000533715.2
ENST00000642585.1
ENST00000644530.1
ENST00000645307.1
CDS-3UTR CAA 90 bp ACGCTGGTGCCATCGTGCAGCTTGGCTCTGTGCACCTGTGCCAGGCTGGCGGCATCCTGGAAGCCCCGCTaGAGGGCCCTGTCCTCTAGC +
Preference number: 5 (lower is better)
Translates to: TLVPSCSLALCTCARLAASWKPR*RALSSS
Trigger: GCTAGAGGACAGGGCCCTCAAGCGGGGCTTCCAGGA...TGCCGCCAGCCTGGCACAGGTGCACAGAGCCAAGCTGCACGATGGCACCAGCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
CDS-3UTR CAA 90 bp ACGCTGGTGCCATCGTGCAGCTTGGCTCTGTGCACCTGTGCCAGGCTGGCGGCAATCTCCCAGACGACCTaGGCGTGGCGCAGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: TLVPSCSLALCTCARLAAISQTT*AWRRRL
Trigger: CAGCCTCCTGCGCCACGCCAAGGTCGTCTGGGAGAT...TGCCGCCAGCCTGGCACAGGTGCACAGAGCCAAGCTGCACGATGGCACCAGCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CAA 90 bp GGAGCACAGCCCCTGGCCCAGCTTCACGTAGAGGCCCCCGTTGCTGATGGCCCCGGCTGGCGGCAGCAATaGGCTGGTAGTCAAACTCCT +
Preference number: 5 (lower is better)
Translates to: GAQPLAQLHVEAPVADGPGWRQQ*AGSQTP
Trigger: AGGAGTTTGACTACCAGCCAATTGCTGCCGCCAGCC...GGGGCCATCAGCAACGGGGGCCTCTACGTGAAGCTGGGCCAGGGGCTGTGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
CDS-3UTR CAA 90 bp CAGCCACGCTGGTGCCATCGTGCAGCTTGGCTCTGTGCACCTGTGCCAGGCTGGGCACAGCGCTCTGCGTaGCGGCCCTCATTCTCGAAG +
Preference number: 5 (lower is better)
Translates to: QPRWCHRAAWLCAPVPGWAQRSA*RPSFSK
Trigger: CTTCGAGAATGAGGGCCGCAACGCAGAGCGCTGTGC...CCAGCCTGGCACAGGTGCACAGAGCCAAGCTGCACGATGGCACCAGCGTGGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CAA 90 bp CACGCTGGTGCCATCGTGCAGCTTGGCTCTGTGCACCTGTGCCAGGCTGGCGGCTTCCGCACCAGAACGTaGCCAGGATGTGGGTCCGAG +
Preference number: 5 (lower is better)
Translates to: HAGAIVQLGSVHLCQAGGFRTRT*PGCGSE
Trigger: CTCGGACCCACATCCTGGCAACGTTCTGGTGCGGAA...GCCGCCAGCCTGGCACAGGTGCACAGAGCCAAGCTGCACGATGGCACCAGCGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CAA 90 bp AGGTCTCCAGGTACTGGTAGAGCTCCTCCGCTGGGGGCACGAGGCTCAGGTGGACTGGCCCAGCCCACCTaGCTGGACTTGTCCCAGTGC +
Preference number: 5 (lower is better)
Translates to: RSPGTGRAPPLGARGSGGLAQPT*LDLSQC
Trigger: GCACTGGGACAAGTCCAGCAAGGTGGGCTGGGCCAG...TCCACCTGAGCCTCGTGCCCCCAGCGGAGGAGCTCTACCAGTACCTGGAGACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS CCA 90 bp CCGTCCCCGAACATGCCAGGGATCCTCGGGCGCCAACACGGGTCCTaGCACTTACTGCCTGCAAGCCCTCCTAGACCCCACTGTGAGCAT +
Preference number: 5 (lower is better)
Translates to: PSPNMPGILGRQHGS*HLLPASPPRPHCEH
Trigger: ATGCTCACAGTGGGGTCTAGGAGGGCTTGCAGGCAGTAAGTGCCAGGACCCGTGTTGGCGCCCGAGGATCCCTGGCATGTTCGGGGACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534714.5
ENST00000645946.1
CDS-3UTR CAA 90 bp CACGCTGGTGCCATCGTGCAGCTTGGCTCTGTGCACCTGTGCCAGGCTGGCGGCGGCTGGCGGCAGCAATaGGCTGGTAGTCAAACTCCT +
Preference number: 5 (lower is better)
Translates to: HAGAIVQLGSVHLCQAGGGWRQQ*AGSQTP
Trigger: AGGAGTTTGACTACCAGCCAATTGCTGCCGCCAGCC...GCCGCCAGCCTGGCACAGGTGCACAGAGCCAAGCTGCACGATGGCACCAGCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
CDS-3UTR CAA 90 bp CTGCCACCAGGGCATCAGCCGCCCGCTGGTGACACGCAGACATCACCTCCAAGTGTGCCATCGTGCAGCTaGGCTCTGTGCACCTGTGCC +
Preference number: 5 (lower is better)
Translates to: LPPGHQPPAGDTQTSPPSVPSCS*ALCTCA
Trigger: GGCACAGGTGCACAGAGCCAAGCTGCACGATGGCAC...ACTTGGAGGTGATGTCTGCGTGTCACCAGCGGGCGGCTGATGCCCTGGTGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533715.2
ENST00000644530.1
CDS-3UTR CAA 90 bp CACATCGTTGACCTTGCAGCCGGCGCAGAAGTCGGCAGTGAGCACGCGCTGGGGTCCACATCGTTGACCTaGCAGCCGGCGCAGAAGTCG +
Preference number: 5 (lower is better)
Translates to: HIVDLAAGAEVGSEHALGSTSLT*QPAQKS
Trigger: CGACTTCTGCGCCGGCTGCAAGGTCAACGATGTGGA...CCCCAGCGCGTGCTCACTGCCGACTTCTGCGCCGGCTGCAAGGTCAACGATGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CAA 90 bp CCGCCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGTGCTCAGCAAAGGCCTaGATGAGCTTTTCTGCTATG +
Preference number: 5 (lower is better)
Translates to: PPPPSAQGEKGPAGPGRLCSAKA*MSFSAM
Trigger: CATAGCAGAAAAGCTCATCAAGGCCTTTGCTGAGCA...CAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CAA 90 bp AGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACAGCCCCATCTCCCAGACGACCTaGGCGTGGCGCAGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: RGVCGHYTASWPSCCHSPISQTT*AWRRRL
Trigger: CAGCCTCCTGCGCCACGCCAAGGTCGTCTGGGAGAT...GGGGCTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CAA 90 bp GTTGAAGGAGCACAGCCCCTGGCCCAGCTTCACGTAGAGGCCCCCGTTGCTGATCTGGCCCAGCCCACCTaGCTGGACTTGTCCCAGTGC +
Preference number: 5 (lower is better)
Translates to: VEGAQPLAQLHVEAPVADLAQPT*LDLSQC
Trigger: GCACTGGGACAAGTCCAGCAAGGTGGGCTGGGCCAG...ATCAGCAACGGGGGCCTCTACGTGAAGCTGGGCCAGGGGCTGTGCTCCTTCAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CAA 90 bp AACAACTCATCCACCTCCTGGAAGCCCCGCTTGAGGGCCCTGTCCTCTAGCACGTCCTGGAAGCCCCGCTaGAGGGCCCTGTCCTCTAGC +
Preference number: 5 (lower is better)
Translates to: NNSSTSWKPRLRALSSSTSWKPR*RALSSS
Trigger: GCTAGAGGACAGGGCCCTCAAGCGGGGCTTCCAGGA...CGTGCTAGAGGACAGGGCCCTCAAGCGGGGCTTCCAGGAGGTGGATGAGTTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000529654.5
ENST00000533715.2
ENST00000644530.1
ENST00000645307.1
CDS-3UTR CAA 90 bp AGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACAGCCCCGTGCCATCGTGCAGCTaGGCTCTGTGCACCTGTGCC +
Preference number: 5 (lower is better)
Translates to: RGVCGHYTASWPSCCHSPVPSCS*ALCTCA
Trigger: GGCACAGGTGCACAGAGCCAAGCTGCACGATGGCAC...GGGGCTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CAA 90 bp CTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACAGACGCGCTTGCTGGACTaGTCCCAGTGCACGCGGGGC +
Preference number: 5 (lower is better)
Translates to: LERSVWSLHGLLAQLLSQTRLLD*SQCTRG
Trigger: GCCCCGCGTGCACTGGGACAAGTCCAGCAAGCGCGT...CTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308860.11
ENST00000645968.2
CDS-3UTR CAA 90 bp CACAGCCACGCTGGTGCCATCGTGCAGCTTGGCTCTGTGCACCTGTGCCAGGCTTCCACATCGTTGACCTaGCAGCCGGCGCAGAAGTCG +
Preference number: 5 (lower is better)
Translates to: HSHAGAIVQLGSVHLCQASTSLT*QPAQKS
Trigger: CGACTTCTGCGCCGGCTGCAAGGTCAACGATGTGGA...AGCCTGGCACAGGTGCACAGAGCCAAGCTGCACGATGGCACCAGCGTGGCTGTG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CAA 90 bp CCACCTCCGTCAGCCCAAGGTGAAAAGGGCCCCGCCGGCCCTGGGCGGCTGCACTGCTCAGCAAAGGCCTaGATGAGCTTTTCTGCTATG +
Preference number: 5 (lower is better)
Translates to: PPPSAQGEKGPAGPGRLHCSAKA*MSFSAM
Trigger: CATAGCAGAAAAGCTCATCAAGGCCTTTGCTGAGCA...GTGCAGCCGCCCAGGGCCGGCGGGGCCCTTTTCACCTTGGGCTGACGGAGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CAA 90 bp CACCCTAGGTCTCCAGGTACTGGTAGAGCTCCTCCGCTGGGGGCACGAGGCTCATTCCGCACCAGAACGTaGCCAGGATGTGGGTCCGAG +
Preference number: 5 (lower is better)
Translates to: HPRSPGTGRAPPLGARGSFRTRT*PGCGSE
Trigger: CTCGGACCCACATCCTGGCAACGTTCTGGTGCGGAA...TGAGCCTCGTGCCCCCAGCGGAGGAGCTCTACCAGTACCTGGAGACCTAGGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CAA 90 bp AGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACAGCCCCGAACAGGAGGTAGTCTaGCACCCCCAGTGCGGCTGC +
Preference number: 5 (lower is better)
Translates to: RGVCGHYTASWPSCCHSPEQEVV*HPQCGC
Trigger: GCAGCCGCACTGGGGGTGCAAGACTACCTCCTGTTC...GGGGCTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CAA 90 bp TTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACAGCGCGCCGAGGGCCACGTaGATAGCGCGCACGGTGTTG +
Preference number: 5 (lower is better)
Translates to: LRGVCGHYTASWPSCCHSAPRAT*IARTVL
Trigger: CAACACCGTGCGCGCTATCAACGTGGCCCTCGGCGC...GCTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CAA 90 bp ATGACCTCAACGAGCCGCAGCAGGAGCTCCAGGGTGTGGATGTCCCCATCAAAGGCGCCGAGGGCCACGTaGATAGCGCGCACGGTGTTG +
Preference number: 5 (lower is better)
Translates to: MTSTSRSRSSRVWMSPSKAPRAT*IARTVL
Trigger: CAACACCGTGCGCGCTATCAACGTGGCCCTCGGCGC...CTTTGATGGGGACATCCACACCCTGGAGCTCCTGCTGCGGCTCGTTGAGGTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CAA 90 bp CGTGGGGGAGGGCCTGGAAGTCCTCAAGGAACAACTCATCCACCTCCTGGAAGCATCTCCCAGACGACCTaGGCGTGGCGCAGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: RGGGPGSPQGTTHPPPGSISQTT*AWRRRL
Trigger: CAGCCTCCTGCGCCACGCCAAGGTCGTCTGGGAGAT...GCTTCCAGGAGGTGGATGAGTTGTTCCTTGAGGACTTCCAGGCCCTCCCCCACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CAA 90 bp AACAACTCATCCACCTCCTGGAAGCCCCGCTTGAGGGCCCTGTCCTCTAGCACGGCACAGCGCTCTGCGTaGCGGCCCTCATTCTCGAAG +
Preference number: 5 (lower is better)
Translates to: NNSSTSWKPRLRALSSSTAQRSA*RPSFSK
Trigger: CTTCGAGAATGAGGGCCGCAACGCAGAGCGCTGTGC...CGTGCTAGAGGACAGGGCCCTCAAGCGGGGCTTCCAGGAGGTGGATGAGTTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CAA 90 bp AGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACAGCCCCATAGCGCGCACGGTGTaGATGTTGCGCAGCACCAGC +
Preference number: 5 (lower is better)
Translates to: RGVCGHYTASWPSCCHSPIARTV*MLRSTS
Trigger: GCTGGTGCTGCGCAACATCAACACCGTGCGCGCTAT...GGGGCTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CAA 90 bp TTGCTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCAGCGCCGAGGGCCACGTaGATAGCGCGCACGGTGTTG +
Preference number: 5 (lower is better)
Translates to: LLERSVWSLHGLLAQLLSAPRAT*IARTVL
Trigger: CAACACCGTGCGCGCTATCAACGTGGCCCTCGGCGC...TGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CAA 90 bp TTGCTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACCCACCTTGCTGGACTaGTCCCAGTGCACGCGGGGC +
Preference number: 5 (lower is better)
Translates to: LLERSVWSLHGLLAQLLSPTLLD*SQCTRG
Trigger: GCCCCGCGTGCACTGGGACAAGTCCAGCAAGGTGGG...TGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CAA 90 bp TCAAACTCCTGGAAGAGCTCGTGGGGGAGGGCCTGGAAGTCCTCAAGGAACAACCCCACCTTGCTGGACTaGTCCCAGTGCACGCGGGGC +
Preference number: 5 (lower is better)
Translates to: SNSWKSSWGRAWKSSRNNPTLLD*SQCTRG
Trigger: GCCCCGCGTGCACTGGGACAAGTCCAGCAAGGTGGG...GTTGTTCCTTGAGGACTTCCAGGCCCTCCCCCACGAGCTCTTCCAGGAGTTTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CAA 90 bp TTGCTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCATCCTGGAAGCCCCGCTaGAGGGCCCTGTCCTCTAGC +
Preference number: 5 (lower is better)
Translates to: LLERSVWSLHGLLAQLLSSWKPR*RALSSS
Trigger: GCTAGAGGACAGGGCCCTCAAGCGGGGCTTCCAGGA...TGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CAA 90 bp GACCCAGCTGAAGCCAAAGCTGGGGTGCATGACCTCAACGAGCCGCAGCAGGAGGGCTGGCGGCAGCAATaGGCTGGTAGTCAAACTCCT +
Preference number: 5 (lower is better)
Translates to: DPAEAKAGVHDLNEPQQEGWRQQ*AGSQTP
Trigger: AGGAGTTTGACTACCAGCCAATTGCTGCCGCCAGCC...CTCCTGCTGCGGCTCGTTGAGGTCATGCACCCCAGCTTTGGCTTCAGCTGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CAA 90 bp TTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACAGCGTGCCATCGTGCAGCTaGGCTCTGTGCACCTGTGCC +
Preference number: 5 (lower is better)
Translates to: LRGVCGHYTASWPSCCHSVPSCS*ALCTCA
Trigger: GGCACAGGTGCACAGAGCCAAGCTGCACGATGGCAC...GCTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CAA 90 bp TGCTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACGCACAGCGCTCTGCGTaGCGGCCCTCATTCTCGAAG +
Preference number: 5 (lower is better)
Translates to: CLRGVCGHYTASWPSCCHAQRSA*RPSFSK
Trigger: CTTCGAGAATGAGGGCCGCAACGCAGAGCGCTGTGC...GTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CAA 90 bp CTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACAGGCAGTGAGCACGCGCTaGCTGGACTTGTCCCAGTGC +
Preference number: 5 (lower is better)
Translates to: LERSVWSLHGLLAQLLSQAVSTR*LDLSQC
Trigger: GCACTGGGACAAGTCCAGCAAGCGCGTGCTCACTGC...CTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308860.11
ENST00000645968.2
CDS-3UTR CAA 90 bp TGCTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACATGGCCTCCACATCGTaGACCTTGCAGCCGGCGCAG +
Preference number: 5 (lower is better)
Translates to: CLRGVCGHYTASWPSCCHMASTS*TLQPAQ
Trigger: CTGCGCCGGCTGCAAGGTCAACGATGTGGAGGCCAT...GTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CAA 90 bp TTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACAGCGAACAGGAGGTAGTCTaGCACCCCCAGTGCGGCTGC +
Preference number: 5 (lower is better)
Translates to: LRGVCGHYTASWPSCCHSEQEVV*HPQCGC
Trigger: GCAGCCGCACTGGGGGTGCAAGACTACCTCCTGTTC...GCTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CAA 90 bp TTGCTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCAGTGCCATCGTGCAGCTaGGCTCTGTGCACCTGTGCC +
Preference number: 5 (lower is better)
Translates to: LLERSVWSLHGLLAQLLSVPSCS*ALCTCA
Trigger: GGCACAGGTGCACAGAGCCAAGCTGCACGATGGCAC...TGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CAA 90 bp ATTGGTGCACCACCAGTAGTCCAGGGAGATCTGCAGGCCGACCTTCAGAGACCTGTGCCATCGTGCAGCTaGGCTCTGTGCACCTGTGCC +
Preference number: 5 (lower is better)
Translates to: IGAPPVVQGDLQADLQRPVPSCS*ALCTCA
Trigger: GGCACAGGTGCACAGAGCCAAGCTGCACGATGGCAC...AGGTCTCTGAAGGTCGGCCTGCAGATCTCCCTGGACTACTGGTGGTGCACCAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533715.2
ENST00000644530.1
CDS-3UTR CAA 90 bp TTGCTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCAATGGCCTCCACATCGTaGACCTTGCAGCCGGCGCAG +
Preference number: 5 (lower is better)
Translates to: LLERSVWSLHGLLAQLLSMASTS*TLQPAQ
Trigger: CTGCGCCGGCTGCAAGGTCAACGATGTGGAGGCCAT...TGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CAA 90 bp CCGCACCAGAACGTTGCCAGGATGTGGGTCCGAGTGGATGAAGCCGGTGTAAAAATGGCCTCCACATCGTaGACCTTGCAGCCGGCGCAG +
Preference number: 5 (lower is better)
Translates to: PHQNVARMWVRVDEAGVKMASTS*TLQPAQ
Trigger: CTGCGCCGGCTGCAAGGTCAACGATGTGGAGGCCAT...TTTTACACCGGCTTCATCCACTCGGACCCACATCCTGGCAACGTTCTGGTGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CAA 90 bp TGCTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACTTCCGCACCAGAACGTaGCCAGGATGTGGGTCCGAG +
Preference number: 5 (lower is better)
Translates to: CLRGVCGHYTASWPSCCHFRTRT*PGCGSE
Trigger: CTCGGACCCACATCCTGGCAACGTTCTGGTGCGGAA...GTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CAA 90 bp TTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACAGCTTCCGCACCAGAACGTaGCCAGGATGTGGGTCCGAG +
Preference number: 5 (lower is better)
Translates to: LRGVCGHYTASWPSCCHSFRTRT*PGCGSE
Trigger: CTCGGACCCACATCCTGGCAACGTTCTGGTGCGGAA...GCTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CAA 90 bp ATGACCTCAACGAGCCGCAGCAGGAGCTCCAGGGTGTGGATGTCCCCATCAAAGCGCACGGTGTTGATGTaGCGCAGCACCAGCAGCATG +
Preference number: 5 (lower is better)
Translates to: MTSTSRSRSSRVWMSPSKRTVLM*RSTSSM
Trigger: CATGCTGCTGGTGCTGCGCAACATCAACACCGTGCG...CTTTGATGGGGACATCCACACCCTGGAGCTCCTGCTGCGGCTCGTTGAGGTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CAA 90 bp CTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACAGCGCACGGTGTTGATGTaGCGCAGCACCAGCAGCATG +
Preference number: 5 (lower is better)
Translates to: LERSVWSLHGLLAQLLSQRTVLM*RSTSSM
Trigger: CATGCTGCTGGTGCTGCGCAACATCAACACCGTGCG...CTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CAA 90 bp TGCTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACATAGCGCGCACGGTGTaGATGTTGCGCAGCACCAGC +
Preference number: 5 (lower is better)
Translates to: CLRGVCGHYTASWPSCCHIARTV*MLRSTS
Trigger: GCTGGTGCTGCGCAACATCAACACCGTGCGCGCTAT...GTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CAA 90 bp CTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACAGATAGCGCGCACGGTGTaGATGTTGCGCAGCACCAGC +
Preference number: 5 (lower is better)
Translates to: LERSVWSLHGLLAQLLSQIARTV*MLRSTS
Trigger: GCTGGTGCTGCGCAACATCAACACCGTGCGCGCTAT...CTGTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CAA 90 bp ACCTTCACAGCCACGCTGGTGCCATCGTGCAGCTTGGCTCTGTGCACCTGTGCCAGCGCCACTTCAAACTaGAGCATCTCCCAGACGACC +
Preference number: 5 (lower is better)
Translates to: TFTATLVPSCSLALCTCASATSN*SISQTT
Trigger: GGTCGTCTGGGAGATGCTCAAGTTTGAAGTGGCGCT...GGCACAGGTGCACAGAGCCAAGCTGCACGATGGCACCAGCGTGGCTGTGAAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CAA 90 bp TGCTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCACGGCTGGCGGCAGCAATaGGCTGGTAGTCAAACTCCT +
Preference number: 5 (lower is better)
Translates to: CLRGVCGHYTASWPSCCHGWRQQ*AGSQTP
Trigger: AGGAGTTTGACTACCAGCCAATTGCTGCCGCCAGCC...GTGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS-3UTR CAA 90 bp CAGGCTGGCGGCAGCAATTGGCTGGTAGTCAAACTCCTGGAAGAGCTCGTGGGGAGCGCCACTTCAAACTaGAGCATCTCCCAGACGACC +
Preference number: 5 (lower is better)
Translates to: QAGGSNWLVVKLLEELVGSATSN*SISQTT
Trigger: GGTCGTCTGGGAGATGCTCAAGTTTGAAGTGGCGCT...CCCCACGAGCTCTTCCAGGAGTTTGACTACCAGCCAATTGCTGCCGCCAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CAA 90 bp CTCTTCCACCCCTCGAAGGACAACATTGGTGCACCACCAGTAGTCCAGGGAGATGGCTGGCGGCAGCAATaGGCTGGTAGTCAAACTCCT +
Preference number: 5 (lower is better)
Translates to: LFHPSKDNIGAPPVVQGDGWRQQ*AGSQTP
Trigger: AGGAGTTTGACTACCAGCCAATTGCTGCCGCCAGCC...ATCTCCCTGGACTACTGGTGGTGCACCAATGTTGTCCTTCGAGGGGTGGAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533715.2
ENST00000644530.1
CDS-3UTR CAA 90 bp TTGCTTGAGAGGAGTGTGTGGTCATTACACGGCCTCCTGGCCCAGCTGCTGTCAAGCGCCACTTCAAACTaGAGCATCTCCCAGACGACC +
Preference number: 5 (lower is better)
Translates to: LLERSVWSLHGLLAQLLSSATSN*SISQTT
Trigger: GGTCGTCTGGGAGATGCTCAAGTTTGAAGTGGCGCT...TGACAGCAGCTGGGCCAGGAGGCCGTGTAATGACCACACACTCCTCTCAAGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308860.11
ENST00000529654.5
ENST00000645307.1
ENST00000645968.2
CDS TCA 90 bp GCTGAGACAGGAGAATCGCTTGATCTTGGTAGGCGGAGATTGCAGTaGGCCAAGATTGAGACACTGCACTCCAGCCGGTCGCCACATCTC +
Preference number: 5 (lower is better)
Translates to: AETGESLDLGRRRLQ*AKIETLHSSRSPHL
Trigger: GAGATGTGGCGACCGGCTGGAGTGCAGTGTCTCAATCTTGGCTCACTGCAATCTCCGCCTACCAAGATCAAGCGATTCTCCTGTCTCAGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533715.2
ENST00000644530.1
CDS-3UTR CAA 90 bp AACAACTCATCCACCTCCTGGAAGCCCCGCTTGAGGGCCCTGTCCTCTAGCACGTGCTCAGCAAAGGCCTaGATGAGCTTTTCTGCTATG +
Preference number: 5 (lower is better)
Translates to: NNSSTSWKPRLRALSSSTCSAKA*MSFSAM
Trigger: CATAGCAGAAAAGCTCATCAAGGCCTTTGCTGAGCA...CGTGCTAGAGGACAGGGCCCTCAAGCGGGGCTTCCAGGAGGTGGATGAGTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS-3UTR CAA 90 bp AGTCAAACTCCTGGAAGAGCTCGTGGGGGAGGGCCTGGAAGTCCTCAAGGAACATGCTCAGCAAAGGCCTaGATGAGCTTTTCTGCTATG +
Preference number: 5 (lower is better)
Translates to: SQTPGRARGGGPGSPQGTCSAKA*MSFSAM
Trigger: CATAGCAGAAAAGCTCATCAAGGCCTTTGCTGAGCA...TGTTCCTTGAGGACTTCCAGGCCCTCCCCCACGAGCTCTTCCAGGAGTTTGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529654.5
ENST00000645307.1
CDS GCA 90 bp GACAGAGCTGCACACAGGTATCATGAAGTTCACAACCAAAGGGCGTaGTTTGGCCGCAGAACCACATGCATGTCCGATCGTGTCTGGTTT +
Preference number: 5 (lower is better)
Translates to: DRAAHRYHEVHNQRA*FGRRTTCMSDRVWF
Trigger: AAACCAGACACGATCGGACATGCATGTGGTTCTGCGGCCAAAGCACGCCCTTTGGTTGTGAACTTCATGATACCTGTGTGCAGCTCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525136.1
ENST00000647088.1
CDS TCA 72 bp CAGAGCTGCACCTTTTGGCGCCCGGACCGCGCCTCCTaGGAGCGGAGGGTTCCAGTCCCGCCCTCGGCGCAC +
Preference number: 6 (lower is better)
Translates to: QSCTFWRPDRAS*ERRVPVPPSAH
Trigger: GTGCGCCGAGGGCGGGACTGGAACCCTCCGCTCTCAGGAGGCGCGGTCCGGGCGCCAAAAGGTGCAGCTCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534714.5
ENST00000645946.1
CDS GCA 72 bp GCATTCCCCGGGCAGGCACCTCACCGTCCCCGAACATaGCAGGGATCCTCGGGCGCCAACACGGGTCCTGGC +
Preference number: 6 (lower is better)
Translates to: AFPGQAPHRPRT*QGSSGANTGPG
Trigger: GCCAGGACCCGTGTTGGCGCCCGAGGATCCCTGGCATGTTCGGGGACGGTGAGGTGCCTGCCCGGGGAATGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534714.5
ENST00000645946.1
CDS GCA 72 bp AAGGCCTGGGGAGGCAAGGTCTGCCAAAGCGCCCCATaGCATCCACCACGAGCCGCATCCTCCTCTTCTCCC +
Preference number: 6 (lower is better)
Translates to: KAWGGKVCQSAP*HPPRAASSSSP
Trigger: GGGAGAAGAGGAGGATGCGGCTCGTGGTGGATGGCATGGGGCGCTTTGGCAGACCTTGCCTCCCCAGGCCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526833.2
ENST00000532190.2
ENST00000642585.1
ENST00000646054.1
CDS TCA 72 bp GGCTTCTGCCTGCTGTGCAGCAGAGCAGAGTGGAAATaGCAGAGCTGCACCTTTTGGCGCCCGGACCGCGCC +
Preference number: 6 (lower is better)
Translates to: GFCLLCSRAEWK*QSCTFWRPDRA
Trigger: GGCGCGGTCCGGGCGCCAAAAGGTGCAGCTCTGTCATTTCCACTCTGCTCTGCTGCACAGCAGGCAGAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526231.6
ENST00000534714.5
ENST00000643493.1
ENST00000645946.1
CDS CCA 72 bp AACATGCCAGGGATCCTCGGGCGCCAACACGGGTCCTaGCACTTACTGCCTGCAAGCCCTCCTAGACCCCAC +
Preference number: 6 (lower is better)
Translates to: NMPGILGRQHGS*HLLPASPPRPH
Trigger: GTGGGGTCTAGGAGGGCTTGCAGGCAGTAAGTGCCAGGACCCGTGTTGGCGCCCGAGGATCCCTGGCATGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534714.5
ENST00000645946.1
CDS TCA 72 bp GGATGCAGCTCCCACAGACAGGCCCGGCCGCAGCAGTaGGAAGCAACTGCCGAGTCTCAGAATGATGCCAGA +
Preference number: 6 (lower is better)
Translates to: GCSSHRQARPQQ*EATAESQNDAR
Trigger: TCTGGCATCATTCTGAGACTCGGCAGTTGCTTCTCACTGCTGCGGCCGGGCCTGTCTGTGGGAGCTGCATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525136.1
ENST00000647088.1
CDS TCA 72 bp GCCGCAGCAGTGAGAAGCAACTGCCGAGTCTCAGAATaGTGCCAGAAACGGTCGCCACATCTCCGACCACTG +
Preference number: 6 (lower is better)
Translates to: AAAVRSNCRVSE*CQKRSPHLRPL
Trigger: CAGTGGTCGGAGATGTGGCGACCGTTTCTGGCATCATTCTGAGACTCGGCAGTTGCTTCTCACTGCTGCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525136.1
ENST00000647088.1
CDS GCA 72 bp CACAACCAAAGGGCGTGCTTTGGCCGCAGAACCACATaGATGTCCGATCGTGTCTGGTTTTCCAGCGCCTGC +
Preference number: 6 (lower is better)
Translates to: HNQRACFGRRTT*MSDRVWFSSAC
Trigger: GCAGGCGCTGGAAAACCAGACACGATCGGACATGCATGTGGTTCTGCGGCCAAAGCACGCCCTTTGGTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525136.1
ENST00000647088.1
CDS GCA 72 bp GACAAACCTCTTCCACCCCTCGAAGGACAACATTGGTaGACCACCAGTAGTCCAGGGAGATCTGCAGGCCGA +
Preference number: 6 (lower is better)
Translates to: DKPLPPLEGQHW*TTSSPGRSAGR
Trigger: TCGGCCTGCAGATCTCCCTGGACTACTGGTGGTGCACCAATGTTGTCCTTCGAGGGGTGGAAGAGGTTTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532190.2
ENST00000646054.1
CDS TCA 72 bp GGAGAATCGCTTGATCTTGGTAGGCGGAGATTGCAGTaGGCCAAGATTGAGACACTGCACTCCAGCCGGTCG +
Preference number: 6 (lower is better)
Translates to: GESLDLGRRRLQ*AKIETLHSSRS
Trigger: CGACCGGCTGGAGTGCAGTGTCTCAATCTTGGCTCACTGCAATCTCCGCCTACCAAGATCAAGCGATTCTCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533715.2
ENST00000644530.1
CDS GCA 72 bp GCACACAGGTATCATGAAGTTCACAACCAAAGGGCGTaGTTTGGCCGCAGAACCACATGCATGTCCGATCGT +
Preference number: 6 (lower is better)
Translates to: AHRYHEVHNQRA*FGRRTTCMSDR
Trigger: ACGATCGGACATGCATGTGGTTCTGCGGCCAAAGCACGCCCTTTGGTTGTGAACTTCATGATACCTGTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525136.1
ENST00000647088.1
CDS CAA 90 bp GAGCTGCACACAGGTATCATGAAGTTCACAACCAAAGGGCGTGCTTaGGCCGCAGAACCACATGCATGTCCGATCGTGTCTGGTTTTCCA +
Preference number: 6 (lower is better)
Translates to: ELHTGIMKFTTKGRA*AAEPHACPIVSGFP
Trigger: TGGAAAACCAGACACGATCGGACATGCATGTGGTTCTGCGGCCAAAGCACGCCCTTTGGTTGTGAACTTCATGATACCTGTGTGCAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525136.1
ENST00000647088.1
CDS CAA 72 bp ACAGGTATCATGAAGTTCACAACCAAAGGGCGTGCTTaGGCCGCAGAACCACATGCATGTCCGATCGTGTCT +
Preference number: 6 (lower is better)
Translates to: TGIMKFTTKGRA*AAEPHACPIVS
Trigger: AGACACGATCGGACATGCATGTGGTTCTGCGGCCAAAGCACGCCCTTTGGTTGTGAACTTCATGATACCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525136.1
ENST00000647088.1