RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADAT2 (Homo sapiens)

Ensembl gene IDs: ENSG00000189007

Ensembl transcript IDs: ENST00000237283.9, ENST00000367593.1, ENST00000606514.5

Found 341 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACTGAGGAGCAGCAGCCCCTCCAGGGCCTGGAGCTGAGCTTCTGGTaGAACGGCGAGGCCCCCTTCTGGGCAGAGGCACACAGTGCGCCC +
Preference number: 1 (lower is better)
Translates to: TEEQQPLQGLELSFW*NGEAPFWAEAHSAP
Trigger: GGGCGCACTGTGTGCCTCTGCCCAGAAGGGGGCCTCGCCGTTCCACCAGAAGCTCAGCTCCAGGCCCTGGAGGGGCTGCTGCTCCTCAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR CCA 90 bp CAGGGCCTGGAGCTGAGCTTCTGGTGGAACGGCGAGGCCCCCTTCTaGGCAGAGGCACACAGTGCGCCCAGAGGGCTGTGCAAAGCTGCC +
Preference number: 1 (lower is better)
Translates to: QGLELSFWWNGEAPF*AEAHSAPRGLCKAA
Trigger: GGCAGCTTTGCACAGCCCTCTGGGCGCACTGTGTGCCTCTGCCCAGAAGGGGGCCTCGCCGTTCCACCAGAAGCTCAGCTCCAGGCCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR CCA 90 bp GCCCAGAGGGCTGTGCAAAGCTGCCCTGTAGTCATGGAGGTGAACTaGGGACTTCCTGCTGTGGATACCCTTTCCAGTGTTGTGTTCAAA +
Preference number: 1 (lower is better)
Translates to: AQRAVQSCPVVMEVN*GLPAVDTLSSVVFK
Trigger: TTTGAACACAACACTGGAAAGGGTATCCACAGCAGGAAGTCCCCAGTTCACCTCCATGACTACAGGGCAGCTTTGCACAGCCCTCTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR TCA 90 bp CAGATGCTTTGCATCAAGGAAATGAATCTACTGAAGAAATGCAACTaGGGAGCAGCAGCCCCTCCAGGGCCTGGAGCTGAGCTTCTGGTG +
Preference number: 1 (lower is better)
Translates to: QMLCIKEMNLLKKCN*GAAAPPGPGAELLV
Trigger: CACCAGAAGCTCAGCTCCAGGCCCTGGAGGGGCTGCTGCTCCTCAGTTGCATTTCTTCAGTAGATTCATTTCCTTGATGCAAAGCATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR CCA 90 bp GTCCCTGGGTCTGGCCACACATTCTCTAAGAAGTCAGCACTTGCCTaGACTGGGCACTTGTGGCTAGAAGGGTATGCACTACTTGCTAAT +
Preference number: 1 (lower is better)
Translates to: VPGSGHTFSKKSALA*TGHLWLEGYALLAN
Trigger: ATTAGCAAGTAGTGCATACCCTTCTAGCCACAAGTGCCCAGTCCAGGCAAGTGCTGACTTCTTAGAGAATGTGTGGCCAGACCCAGGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR TCA 90 bp ATGGGGGCCAAGGTGGAGGCCTGGTTAAAAAGAGGACTTAGGGCCTaGCTGAAGTTTGGTCAAGGAGAGAGCCTTTGTCAAACTACACCA +
Preference number: 1 (lower is better)
Translates to: MGAKVEAWLKRGLRA*LKFGQGESLCQTTP
Trigger: TGGTGTAGTTTGACAAAGGCTCTCTCCTTGACCAAACTTCAGTCAGGCCCTAAGTCCTCTTTTTAACCAGGCCTCCACCTTGGCCCCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR CCA 90 bp CTTTGCCAAAAGGCAGAGAAACCAATTCCTGGTGTCTGGTTTCCCTaGGGCTATAAGGCCAGTTCACGTAGGACCACTGGGAAAGACAAG +
Preference number: 1 (lower is better)
Translates to: LCQKAEKPIPGVWFP*GYKASSRRTTGKDK
Trigger: CTTGTCTTTCCCAGTGGTCCTACGTGAACTGGCCTTATAGCCCCAGGGAAACCAGACACCAGGAATTGGTTTCTCTGCCTTTTGGCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR GCA 90 bp AATGTCTATGACACCCTCAGTGGTCCTGCCCTCCAATCTGCAGTATaGCATATTAATGATTTTCTCCCAAAGCGATGGAGGGAACTGTGC +
Preference number: 1 (lower is better)
Translates to: NVYDTLSGPALQSAV*HINDFLPKRWRELC
Trigger: GCACAGTTCCCTCCATCGCTTTGGGAGAAAATCATTAATATGGCATACTGCAGATTGGAGGGCAGGACCACTGAGGGTGTCATAGACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR CCA 90 bp ACCAAGAACCTACTGGACATAAGATGCTCAGCCAGACTTACTGGGTaGTACTCTAGAGAGGCAAAACTCCAGGTTGGTTGTCCTACAAAT +
Preference number: 1 (lower is better)
Translates to: TKNLLDIRCSARLTG*YSREAKLQVGCPTN
Trigger: ATTTGTAGGACAACCAACCTGGAGTTTTGCCTCTCTAGAGTACCACCCAGTAAGTCTGGCTGAGCATCTTATGTCCAGTAGGTTCTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR TCA 90 bp TTTAACCCGTGTCTAAGTAGCTGGGGAATGTGGTACTCAGGAAGCTaGATGACCTCAACATATATCCATAATTCCTCACTGTCACTTGGA +
Preference number: 1 (lower is better)
Translates to: FNPCLSSWGMWYSGS*MTSTYIHNSSLSLG
Trigger: TCCAAGTGACAGTGAGGAATTATGGATATATGTTGAGGTCATTCAGCTTCCTGAGTACCACATTCCCCAGCTACTTAGACACGGGTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR CCA 90 bp GGCTATAAGGCCAGTTCACGTAGGACCACTGGGAAAGACAAGCTTTaGCATCACCACAGATTTTTAACAAGGCGCTATACTACTTTTAAA +
Preference number: 1 (lower is better)
Translates to: GYKASSRRTTGKDKL*HHHRFLTRRYTTFK
Trigger: TTTAAAAGTAGTATAGCGCCTTGTTAAAAATCTGTGGTGATGCCAAAGCTTGTCTTTCCCAGTGGTCCTACGTGAACTGGCCTTATAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR CCA 90 bp CATACCACCCATTCTCCACAGTTTGTTGCAAAGACCAGCAAACACTaGATAACTCTAGCAGCTTCTAAATGTAATCATTTCCCCCTAATT +
Preference number: 1 (lower is better)
Translates to: HTTHSPQFVAKTSKH*ITLAASKCNHFPLI
Trigger: AATTAGGGGGAAATGATTACATTTAGAAGCTGCTAGAGTTATCCAGTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAATGGGTGGTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR TCA 90 bp AAATGCAATGAAATCTGCTTGCAGGAAAGCATAAGAAGCCAGAAATaGATTACGACCAACTGCAAAAAGGAACAAACTAGTAGAAGCACT +
Preference number: 1 (lower is better)
Translates to: KCNEICLQESIRSQK*ITTNCKKEQTSRST
Trigger: AGTGCTTCTACTAGTTTGTTCCTTTTTGCAGTTGGTCGTAATTCATTTCTGGCTTCTTATGCTTTCCTGCAAGCAGATTTCATTGCATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR CCA 90 bp TCACCACTTTCAGAACTATTTTGTACACAAAACAAGTCTTTCAGCTaGTGTCTTGGACAGGCACTATCAGTATCAATCAATGGAATTCAA +
Preference number: 1 (lower is better)
Translates to: SPLSELFCTQNKSFS*CLGQALSVSINGIQ
Trigger: TTGAATTCCATTGATTGATACTGATAGTGCCTGTCCAAGACACCAGCTGAAAGACTTGTTTTGTGTACAAAATAGTTCTGAAAGTGGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR CCA 90 bp ATATTTTATGACCAAATGACAACCTACCTAGAGTGTTTATCCCATTaGATCACCATAGGTCATCTGCAGTATCAGAAACATCTTAGGTCT +
Preference number: 1 (lower is better)
Translates to: IFYDQMTTYLECLSH*ITIGHLQYQKHLRS
Trigger: AGACCTAAGATGTTTCTGATACTGCAGATGACCTATGGTGATCCAATGGGATAAACACTCTAGGTAGGTTGTCATTTGGTCATAAAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR CCA 90 bp TTTGTCAAACTACACCATGAAGCCTCCTTAATAGTCATGGATATGTaGTGTTCAACCCAATATCCACTTAGAAATCAGGTGATAAATAGT +
Preference number: 1 (lower is better)
Translates to: FVKLHHEASLIVMDM*CSTQYPLRNQVINS
Trigger: ACTATTTATCACCTGATTTCTAAGTGGATATTGGGTTGAACACCACATATCCATGACTATTAAGGAGGCTTCATGGTGTAGTTTGACAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR TCA 90 bp AGTAACAAGAAAGCACAAAGATATTTTAACATGATCTTTTATCAGTaGTTGAAGCCTACCAAAGCATTACATACCACCCATTCTCCACAG +
Preference number: 1 (lower is better)
Translates to: SNKKAQRYFNMIFYQ*LKPTKALHTTHSPQ
Trigger: CTGTGGAGAATGGGTGGTATGTAATGCTTTGGTAGGCTTCAATCACTGATAAAAGATCATGTTAAAATATCTTTGTGCTTTCTTGTTACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR TCA 90 bp CTAAAGCTGGGCTGTATAGGCCCATCAAGAATGGGGGCCAAGGTGGAGGCCTGGTCCAGGGCCTGGAGCTaGGCTTCTGGTGGAACGGCG +
Preference number: 2 (lower is better)
Translates to: LKLGCIGPSRMGAKVEAWSRAWS*ASGGTA
Trigger: CGCCGTTCCACCAGAAGCTCAGCTCCAGGCCCTGGA...CCAGGCCTCCACCTTGGCCCCCATTCTTGATGGGCCTATACAGCCCAGCTTTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CCA 90 bp CTAAAGCTGGGCTGTATAGGCCCATCAAGAATGGGGGCCAAGGTGGAGGCCTGGGAGCTGAGCTTCTGGTaGAACGGCGAGGCCCCCTTC +
Preference number: 2 (lower is better)
Translates to: LKLGCIGPSRMGAKVEAWELSFW*NGEAPF
Trigger: GAAGGGGGCCTCGCCGTTCCACCAGAAGCTCAGCTC...CCAGGCCTCCACCTTGGCCCCCATTCTTGATGGGCCTATACAGCCCAGCTTTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR TCA 90 bp CTAAAGCTGGGCTGTATAGGCCCATCAAGAATGGGGGCCAAGGTGGAGGCCTGGCTGAAGAAATGCAACTaGGGAGCAGCAGCCCCTCCA +
Preference number: 2 (lower is better)
Translates to: LKLGCIGPSRMGAKVEAWLKKCN*GAAAPP
Trigger: TGGAGGGGCTGCTGCTCCTCAGTTGCATTTCTTCAG...CCAGGCCTCCACCTTGGCCCCCATTCTTGATGGGCCTATACAGCCCAGCTTTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CCA 90 bp GCTATAAGGCCAGTTCACGTAGGACCACTGGGAAAGACAAGCTTTGGCATCACCCTGGAGCTGAGCTTCTaGTGGAACGGCGAGGCCCCC +
Preference number: 2 (lower is better)
Translates to: AIRPVHVGPLGKTSFGITLELSF*WNGEAP
Trigger: GGGGGCCTCGCCGTTCCACCAGAAGCTCAGCTCCAG...GGTGATGCCAAAGCTTGTCTTTCCCAGTGGTCCTACGTGAACTGGCCTTATAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR TCA 90 bp CTAAAGCTGGGCTGTATAGGCCCATCAAGAATGGGGGCCAAGGTGGAGGCCTGGTTAGGTGTGGTGACATaGGTCTGTGGTCCCAGCTAC +
Preference number: 2 (lower is better)
Translates to: LKLGCIGPSRMGAKVEAWLGVVT*VCGPSY
Trigger: GTAGCTGGGACCACAGACTCATGTCACCACACCTAA...CCAGGCCTCCACCTTGGCCCCCATTCTTGATGGGCCTATACAGCCCAGCTTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CCA 90 bp CTAAAGCTGGGCTGTATAGGCCCATCAAGAATGGGGGCCAAGGTGGAGGCCTGGTGGACTGGGCACTTGTaGCTAGAAGGGTATGCACTA +
Preference number: 2 (lower is better)
Translates to: LKLGCIGPSRMGAKVEAWWTGHL*LEGYAL
Trigger: TAGTGCATACCCTTCTAGCCACAAGTGCCCAGTCCA...CCAGGCCTCCACCTTGGCCCCCATTCTTGATGGGCCTATACAGCCCAGCTTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CCA 90 bp CTAAAGCTGGGCTGTATAGGCCCATCAAGAATGGGGGCCAAGGTGGAGGCCTGGAGAGAAACCAATTCCTaGTGTCTGGTTTCCCTGGGG +
Preference number: 2 (lower is better)
Translates to: LKLGCIGPSRMGAKVEAWRETNS*CLVSLG
Trigger: CCCCAGGGAAACCAGACACCAGGAATTGGTTTCTCT...CCAGGCCTCCACCTTGGCCCCCATTCTTGATGGGCCTATACAGCCCAGCTTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR TCA 90 bp CTAAAGCTGGGCTGTATAGGCCCATCAAGAATGGGGGCCAAGGTGGAGGCCTGGCCAGATGACCAAAATTaGCATCACCTTGGTGTGACG +
Preference number: 2 (lower is better)
Translates to: LKLGCIGPSRMGAKVEAWPDDQN*HHLGVT
Trigger: CGTCACACCAAGGTGATGTCAATTTTGGTCATCTGG...CCAGGCCTCCACCTTGGCCCCCATTCTTGATGGGCCTATACAGCCCAGCTTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CCA 90 bp GCTATAAGGCCAGTTCACGTAGGACCACTGGGAAAGACAAGCTTTGGCATCACCCAGCCCCCAGTGCCCTaGAAGAACATCGTAGCTGCA +
Preference number: 2 (lower is better)
Translates to: AIRPVHVGPLGKTSFGITQPPVP*KNIVAA
Trigger: TGCAGCTACGATGTTCTTCCAGGGCACTGGGGGCTG...GGTGATGCCAAAGCTTGTCTTTCCCAGTGGTCCTACGTGAACTGGCCTTATAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CCA 90 bp AGCATTACATACCACCCATTCTCCACAGTTTGTTGCAAAGACCAGCAAACACTGGGCGAGGCCCCCTTCTaGGCAGAGGCACACAGTGCG +
Preference number: 2 (lower is better)
Translates to: SITYHPFSTVCCKDQQTLGEAPF*AEAHSA
Trigger: CGCACTGTGTGCCTCTGCCCAGAAGGGGGCCTCGCC...CAGTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAATGGGTGGTATGTAATGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CCA 90 bp CTAAAGCTGGGCTGTATAGGCCCATCAAGAATGGGGGCCAAGGTGGAGGCCTGGGCCAGACTTACTGGGTaGTACTCTAGAGAGGCAAAA +
Preference number: 2 (lower is better)
Translates to: LKLGCIGPSRMGAKVEAWARLTG*YSREAK
Trigger: TTTTGCCTCTCTAGAGTACCACCCAGTAAGTCTGGC...CCAGGCCTCCACCTTGGCCCCCATTCTTGATGGGCCTATACAGCCCAGCTTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CCA 90 bp GCAGCTAACATTTTCTCGAAGGGCCAGACGCTAAATATTTTAGGCCTTTGTGAGCTGGAGCTGAGCTTCTaGTGGAACGGCGAGGCCCCC +
Preference number: 2 (lower is better)
Translates to: AANIFSKGQTLNILGLCELELSF*WNGEAP
Trigger: GGGGGCCTCGCCGTTCCACCAGAAGCTCAGCTCCAG...CTCACAAAGGCCTAAAATATTTAGCGTCTGGCCCTTCGAGAAAATGTTAGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CCA 90 bp CTAAAGCTGGGCTGTATAGGCCCATCAAGAATGGGGGCCAAGGTGGAGGCCTGGAGTAGCGACAGTCTCTaGGCTAGAATGCTCATATAC +
Preference number: 2 (lower is better)
Translates to: LKLGCIGPSRMGAKVEAWSSDSL*ARMLIY
Trigger: GTATATGAGCATTCTAGCCCAGAGACTGTCGCTACT...CCAGGCCTCCACCTTGGCCCCCATTCTTGATGGGCCTATACAGCCCAGCTTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR TCA 90 bp CTAAAGCTGGGCTGTATAGGCCCATCAAGAATGGGGGCCAAGGTGGAGGCCTGGACAGCTTTCAGTCTATaGATCTTGTCCAGGTCACTT +
Preference number: 2 (lower is better)
Translates to: LKLGCIGPSRMGAKVEAWTAFSL*ILSRSL
Trigger: AAGTGACCTGGACAAGATTCATAGACTGAAAGCTGT...CCAGGCCTCCACCTTGGCCCCCATTCTTGATGGGCCTATACAGCCCAGCTTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR GCA 90 bp CTAAAGCTGGGCTGTATAGGCCCATCAAGAATGGGGGCCAAGGTGGAGGCCTGGAGGAAGAGATGGTTGTaGCAAGTAACAAGAAAGCAC +
Preference number: 2 (lower is better)
Translates to: LKLGCIGPSRMGAKVEAWRKRWL*QVTRKH
Trigger: GTGCTTTCTTGTTACTTGGCACAACCATCTCTTCCT...CCAGGCCTCCACCTTGGCCCCCATTCTTGATGGGCCTATACAGCCCAGCTTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CCA 90 bp GCTATAAGGCCAGTTCACGTAGGACCACTGGGAAAGACAAGCTTTGGCATCACCGTCATGGAGGTGAACTaGGGACTTCCTGCTGTGGAT +
Preference number: 2 (lower is better)
Translates to: AIRPVHVGPLGKTSFGITVMEVN*GLPAVD
Trigger: ATCCACAGCAGGAAGTCCCCAGTTCACCTCCATGAC...GGTGATGCCAAAGCTTGTCTTTCCCAGTGGTCCTACGTGAACTGGCCTTATAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CCA 90 bp GCTATAAGGCCAGTTCACGTAGGACCACTGGGAAAGACAAGCTTTGGCATCACCTTTCTCCCAAAGCGATaGAGGGAACTGTGCCCCAGT +
Preference number: 2 (lower is better)
Translates to: AIRPVHVGPLGKTSFGITFLPKR*RELCPS
Trigger: ACTGGGGCACAGTTCCCTCCATCGCTTTGGGAGAAA...GGTGATGCCAAAGCTTGTCTTTCCCAGTGGTCCTACGTGAACTGGCCTTATAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CCA 90 bp GCAGAACTCACCAGTCTAATCCATAAAAATCACGTCGCCCATCGCTCCTTTCCTAGCACTTGCCTGGACTaGGCACTTGTGGCTAGAAGG +
Preference number: 2 (lower is better)
Translates to: AELTSLIHKNHVAHRSFPSTCLD*ALVARR
Trigger: CCTTCTAGCCACAAGTGCCCAGTCCAGGCAAGTGCT...AGGAAAGGAGCGATGGGCGACGTGATTTTTATGGATTAGACTGGTGAGTTCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CCA 90 bp CTAAAGCTGGGCTGTATAGGCCCATCAAGAATGGGGGCCAAGGTGGAGGCCTGGTTCCTCACTGTCACTTaGAAATTGCTAGCAGAATTC +
Preference number: 2 (lower is better)
Translates to: LKLGCIGPSRMGAKVEAWFLTVT*KLLAEF
Trigger: GAATTCTGCTAGCAATTTCCAAGTGACAGTGAGGAA...CCAGGCCTCCACCTTGGCCCCCATTCTTGATGGGCCTATACAGCCCAGCTTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CCA 90 bp GCTATAAGGCCAGTTCACGTAGGACCACTGGGAAAGACAAGCTTTGGCATCACCCCGTGTCTAAGTAGCTaGGGAATGTGGTACTCAGGA +
Preference number: 2 (lower is better)
Translates to: AIRPVHVGPLGKTSFGITPCLSS*GMWYSG
Trigger: TCCTGAGTACCACATTCCCCAGCTACTTAGACACGG...GGTGATGCCAAAGCTTGTCTTTCCCAGTGGTCCTACGTGAACTGGCCTTATAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR GCA 90 bp GCAGAACTCACCAGTCTAATCCATAAAAATCACGTCGCCCATCGCTCCTTTCCTGAACTGGGGACTTCCTaGTGTGGATACCCTTTCCAG +
Preference number: 2 (lower is better)
Translates to: AELTSLIHKNHVAHRSFPELGTS*CGYPFQ
Trigger: CTGGAAAGGGTATCCACAGCAGGAAGTCCCCAGTTC...AGGAAAGGAGCGATGGGCGACGTGATTTTTATGGATTAGACTGGTGAGTTCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CCA 90 bp AGCATTACATACCACCCATTCTCCACAGTTTGTTGCAAAGACCAGCAAACACTGCACACTCCAGGTCCCTaGGTCTGGCCACACATTCTC +
Preference number: 2 (lower is better)
Translates to: SITYHPFSTVCCKDQQTLHTPGP*VWPHIL
Trigger: GAGAATGTGTGGCCAGACCCAGGGACCTGGAGTGTG...CAGTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAATGGGTGGTATGTAATGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR TCA 90 bp AGCATTACATACCACCCATTCTCCACAGTTTGTTGCAAAGACCAGCAAACACTGCTGAAGAAATGCAACTaGGGAGCAGCAGCCCCTCCA +
Preference number: 2 (lower is better)
Translates to: SITYHPFSTVCCKDQQTLLKKCN*GAAAPP
Trigger: TGGAGGGGCTGCTGCTCCTCAGTTGCATTTCTTCAG...CAGTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAATGGGTGGTATGTAATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR TCA 90 bp GCAGCTAACATTTTCTCGAAGGGCCAGACGCTAAATATTTTAGGCCTTTGTGAGAGGTTGAGGCTGCAGTaGGCTGTGATCATGCCACTG +
Preference number: 2 (lower is better)
Translates to: AANIFSKGQTLNILGLCERLRLQ*AVIMPL
Trigger: CAGTGGCATGATCACAGCTCACTGCAGCCTCAACCT...CTCACAAAGGCCTAAAATATTTAGCGTCTGGCCCTTCGAGAAAATGTTAGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR GCA 90 bp CCTGCCCTCCAATCTGCAGTATGCCATATTAATGATTTTCTCCCAAAGCGATGGCTCAGGGTGGCAAACTaGAGTCCAAACACACTCCAG +
Preference number: 2 (lower is better)
Translates to: PALQSAVCHINDFLPKRWLRVAN*SPNTLQ
Trigger: CTGGAGTGTGTTTGGACTGCAGTTTGCCACCCTGAG...CCATCGCTTTGGGAGAAAATCATTAATATGGCATACTGCAGATTGGAGGGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CCA 90 bp CCTGCCCTCCAATCTGCAGTATGCCATATTAATGATTTTCTCCCAAAGCGATGGAAGTCAGCACTTGCCTaGACTGGGCACTTGTGGCTA +
Preference number: 2 (lower is better)
Translates to: PALQSAVCHINDFLPKRWKSALA*TGHLWL
Trigger: TAGCCACAAGTGCCCAGTCCAGGCAAGTGCTGACTT...CCATCGCTTTGGGAGAAAATCATTAATATGGCATACTGCAGATTGGAGGGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CCA 90 bp AAAGCATTACATACCACCCATTCTCCACAGTTTGTTGCAAAGACCAGCAAACACCACACTCCAGGTCCCTaGGTCTGGCCACACATTCTC +
Preference number: 2 (lower is better)
Translates to: KALHTTHSPQFVAKTSKHHTPGP*VWPHIL
Trigger: GAGAATGTGTGGCCAGACCCAGGGACCTGGAGTGTG...GTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAATGGGTGGTATGTAATGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CCA 90 bp GCTATAAGGCCAGTTCACGTAGGACCACTGGGAAAGACAAGCTTTGGCATCACCAACAAGTCTTTCAGCTaGTGTCTTGGACAGGCACTA +
Preference number: 2 (lower is better)
Translates to: AIRPVHVGPLGKTSFGITNKSFS*CLGQAL
Trigger: TAGTGCCTGTCCAAGACACCAGCTGAAAGACTTGTT...GGTGATGCCAAAGCTTGTCTTTCCCAGTGGTCCTACGTGAACTGGCCTTATAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CCA 90 bp GCAGAACTCACCAGTCTAATCCATAAAAATCACGTCGCCCATCGCTCCTTTCCTAGAGAAACCAATTCCTaGTGTCTGGTTTCCCTGGGG +
Preference number: 2 (lower is better)
Translates to: AELTSLIHKNHVAHRSFPRETNS*CLVSLG
Trigger: CCCCAGGGAAACCAGACACCAGGAATTGGTTTCTCT...AGGAAAGGAGCGATGGGCGACGTGATTTTTATGGATTAGACTGGTGAGTTCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR CAA 90 bp ACTATACTGAAGCATTTCGGGGTAAAGGGCCATGGTGTGTTGTGTTaGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: TILKHFGVKGHGVLC*CVCVCVCVCVCVCV
Trigger: CACACACACACACACACACACACACACACACACACACACACACAAACACAACACACCATGGCCCTTTACCCCGAAATGCTTCAGTATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR GCA 90 bp GCTATAAGGCCAGTTCACGTAGGACCACTGGGAAAGACAAGCTTTGGCATCACCTTCTCCACAGTTTGTTaGAAAGACCAGCAAACACTG +
Preference number: 2 (lower is better)
Translates to: AIRPVHVGPLGKTSFGITFSTVC*KDQQTL
Trigger: CAGTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAA...GGTGATGCCAAAGCTTGTCTTTCCCAGTGGTCCTACGTGAACTGGCCTTATAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR GCA 90 bp GCTATAAGGCCAGTTCACGTAGGACCACTGGGAAAGACAAGCTTTGGCATCACCAGGAAGAGATGGTTGTaGCAAGTAACAAGAAAGCAC +
Preference number: 2 (lower is better)
Translates to: AIRPVHVGPLGKTSFGITRKRWL*QVTRKH
Trigger: GTGCTTTCTTGTTACTTGGCACAACCATCTCTTCCT...GGTGATGCCAAAGCTTGTCTTTCCCAGTGGTCCTACGTGAACTGGCCTTATAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CCA 90 bp AGCATTACATACCACCCATTCTCCACAGTTTGTTGCAAAGACCAGCAAACACTGAAGTCAGCACTTGCCTaGACTGGGCACTTGTGGCTA +
Preference number: 2 (lower is better)
Translates to: SITYHPFSTVCCKDQQTLKSALA*TGHLWL
Trigger: TAGCCACAAGTGCCCAGTCCAGGCAAGTGCTGACTT...CAGTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAATGGGTGGTATGTAATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CCA 90 bp GCAGAACTCACCAGTCTAATCCATAAAAATCACGTCGCCCATCGCTCCTTTCCTAAGGTGTTCTCAGGGTaGCAAACTGCAGTCCAAACA +
Preference number: 2 (lower is better)
Translates to: AELTSLIHKNHVAHRSFPKVFSG*QTAVQT
Trigger: TGTTTGGACTGCAGTTTGCCACCCTGAGAACACCTT...AGGAAAGGAGCGATGGGCGACGTGATTTTTATGGATTAGACTGGTGAGTTCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CCA 90 bp GCTATAAGGCCAGTTCACGTAGGACCACTGGGAAAGACAAGCTTTGGCATCACCGAGTGTTTATCCCATTaGATCACCATAGGTCATCTG +
Preference number: 2 (lower is better)
Translates to: AIRPVHVGPLGKTSFGITECLSH*ITIGHL
Trigger: CAGATGACCTATGGTGATCCAATGGGATAAACACTC...GGTGATGCCAAAGCTTGTCTTTCCCAGTGGTCCTACGTGAACTGGCCTTATAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR GCA 90 bp GCAGAACTCACCAGTCTAATCCATAAAAATCACGTCGCCCATCGCTCCTTTCCTCCTCTTCCCACAGACTaGTTATTCATTGCAACAGAG +
Preference number: 2 (lower is better)
Translates to: AELTSLIHKNHVAHRSFPPLPTD*LFIATE
Trigger: CTCTGTTGCAATGAATAAGCAGTCTGTGGGAAGAGG...AGGAAAGGAGCGATGGGCGACGTGATTTTTATGGATTAGACTGGTGAGTTCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CCA 90 bp CCTGCCCTCCAATCTGCAGTATGCCATATTAATGATTTTCTCCCAAAGCGATGGAAGGTGTTCTCAGGGTaGCAAACTGCAGTCCAAACA +
Preference number: 2 (lower is better)
Translates to: PALQSAVCHINDFLPKRWKVFSG*QTAVQT
Trigger: TGTTTGGACTGCAGTTTGCCACCCTGAGAACACCTT...CCATCGCTTTGGGAGAAAATCATTAATATGGCATACTGCAGATTGGAGGGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CCA 90 bp CAAAACCAAGCAATTATAAGTCCTCTGAAGCATGTAACTGTGATTAGCTGCTACCAGCCCCCAGTGCCCTaGAAGAACATCGTAGCTGCA +
Preference number: 2 (lower is better)
Translates to: QNQAIISPLKHVTVISCYQPPVP*KNIVAA
Trigger: TGCAGCTACGATGTTCTTCCAGGGCACTGGGGGCTG...GTAGCAGCTAATCACAGTTACATGCTTCAGAGGACTTATAATTGCTTGGTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CCA 90 bp AAAGCATTACATACCACCCATTCTCCACAGTTTGTTGCAAAGACCAGCAAACACGGGGACTTCCTGCTGTaGATACCCTTTCCAGTGTTG +
Preference number: 2 (lower is better)
Translates to: KALHTTHSPQFVAKTSKHGDFLL*IPFPVL
Trigger: CAACACTGGAAAGGGTATCCACAGCAGGAAGTCCCC...GTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAATGGGTGGTATGTAATGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CCA 90 bp CAGTATCAGAAACATCTTAGGTCTATTTTCCAAAACCCTATCTTATCAGGCATAGAGCTGAGCTTCTGGTaGAACGGCGAGGCCCCCTTC +
Preference number: 2 (lower is better)
Translates to: QYQKHLRSIFQNPILSGIELSFW*NGEAPF
Trigger: GAAGGGGGCCTCGCCGTTCCACCAGAAGCTCAGCTC...TATGCCTGATAAGATAGGGTTTTGGAAAATAGACCTAAGATGTTTCTGATACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CCA 90 bp GCAGAACTCACCAGTCTAATCCATAAAAATCACGTCGCCCATCGCTCCTTTCCTAGTAGCGACAGTCTCTaGGCTAGAATGCTCATATAC +
Preference number: 2 (lower is better)
Translates to: AELTSLIHKNHVAHRSFPSSDSL*ARMLIY
Trigger: GTATATGAGCATTCTAGCCCAGAGACTGTCGCTACT...AGGAAAGGAGCGATGGGCGACGTGATTTTTATGGATTAGACTGGTGAGTTCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CCA 90 bp AAAGCATTACATACCACCCATTCTCCACAGTTTGTTGCAAAGACCAGCAAACACTTTCTCCCAAAGCGATaGAGGGAACTGTGCCCCAGT +
Preference number: 2 (lower is better)
Translates to: KALHTTHSPQFVAKTSKHFLPKR*RELCPS
Trigger: ACTGGGGCACAGTTCCCTCCATCGCTTTGGGAGAAA...GTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAATGGGTGGTATGTAATGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CCA 90 bp GCAGCTAACATTTTCTCGAAGGGCCAGACGCTAAATATTTTAGGCCTTTGTGAGGCCAAGGTGGAGGCCTaGTTAAAAAGAGGACTTAGG +
Preference number: 2 (lower is better)
Translates to: AANIFSKGQTLNILGLCEAKVEA*LKRGLR
Trigger: CCTAAGTCCTCTTTTTAACCAGGCCTCCACCTTGGC...CTCACAAAGGCCTAAAATATTTAGCGTCTGGCCCTTCGAGAAAATGTTAGCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR TCA 90 bp GCTATAAGGCCAGTTCACGTAGGACCACTGGGAAAGACAAGCTTTGGCATCACCTCTTTTATCAGTGATTaGAGCCTACCAAAGCATTAC +
Preference number: 2 (lower is better)
Translates to: AIRPVHVGPLGKTSFGITSFISD*SLPKHY
Trigger: GTAATGCTTTGGTAGGCTTCAATCACTGATAAAAGA...GGTGATGCCAAAGCTTGTCTTTCCCAGTGGTCCTACGTGAACTGGCCTTATAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR TCA 90 bp GCTATAAGGCCAGTTCACGTAGGACCACTGGGAAAGACAAGCTTTGGCATCACCATGATCTTTTATCAGTaGTTGAAGCCTACCAAAGCA +
Preference number: 2 (lower is better)
Translates to: AIRPVHVGPLGKTSFGITMIFYQ*LKPTKA
Trigger: TGCTTTGGTAGGCTTCAATCACTGATAAAAGATCAT...GGTGATGCCAAAGCTTGTCTTTCCCAGTGGTCCTACGTGAACTGGCCTTATAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR GCA 90 bp AGCATTACATACCACCCATTCTCCACAGTTTGTTGCAAAGACCAGCAAACACTGCTACTGGACATAAGATaGTCAGCCAGACTTACTGGG +
Preference number: 2 (lower is better)
Translates to: SITYHPFSTVCCKDQQTLLLDIR*SARLTG
Trigger: CCCAGTAAGTCTGGCTGAGCATCTTATGTCCAGTAG...CAGTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAATGGGTGGTATGTAATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CCA 90 bp TACTCTAGAGAGGCAAAACTCCAGGTTGGTTGTCCTACAAATAATCCCCAAGAATGGACTGGGCACTTGTaGCTAGAAGGGTATGCACTA +
Preference number: 2 (lower is better)
Translates to: YSREAKLQVGCPTNNPQEWTGHL*LEGYAL
Trigger: TAGTGCATACCCTTCTAGCCACAAGTGCCCAGTCCA...TTCTTGGGGATTATTTGTAGGACAACCAACCTGGAGTTTTGCCTCTCTAGAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CCA 90 bp GCAGCTAACATTTTCTCGAAGGGCCAGACGCTAAATATTTTAGGCCTTTGTGAGGCCAGACTTACTGGGTaGTACTCTAGAGAGGCAAAA +
Preference number: 2 (lower is better)
Translates to: AANIFSKGQTLNILGLCEARLTG*YSREAK
Trigger: TTTTGCCTCTCTAGAGTACCACCCAGTAAGTCTGGC...CTCACAAAGGCCTAAAATATTTAGCGTCTGGCCCTTCGAGAAAATGTTAGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR TCA 90 bp CCTGCCCTCCAATCTGCAGTATGCCATATTAATGATTTTCTCCCAAAGCGATGGACAGCTTTCAGTCTATaGATCTTGTCCAGGTCACTT +
Preference number: 2 (lower is better)
Translates to: PALQSAVCHINDFLPKRWTAFSL*ILSRSL
Trigger: AAGTGACCTGGACAAGATTCATAGACTGAAAGCTGT...CCATCGCTTTGGGAGAAAATCATTAATATGGCATACTGCAGATTGGAGGGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR GCA 90 bp GCTATAAGGCCAGTTCACGTAGGACCACTGGGAAAGACAAGCTTTGGCATCACCGTAACTGTGATTAGCTaGTACTCTCAGCAATATAAA +
Preference number: 2 (lower is better)
Translates to: AIRPVHVGPLGKTSFGITVTVIS*YSQQYK
Trigger: TTTATATTGCTGAGAGTAGCAGCTAATCACAGTTAC...GGTGATGCCAAAGCTTGTCTTTCCCAGTGGTCCTACGTGAACTGGCCTTATAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR GCA 90 bp GCTATAAGGCCAGTTCACGTAGGACCACTGGGAAAGACAAGCTTTGGCATCACCAAATGCAATGAAATCTaGTTGCAGGAAAGCATAAGA +
Preference number: 2 (lower is better)
Translates to: AIRPVHVGPLGKTSFGITKCNEI*LQESIR
Trigger: TCTTATGCTTTCCTGCAAGCAGATTTCATTGCATTT...GGTGATGCCAAAGCTTGTCTTTCCCAGTGGTCCTACGTGAACTGGCCTTATAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CCA 90 bp GCAGAACTCACCAGTCTAATCCATAAAAATCACGTCGCCCATCGCTCCTTTCCTTCCCCCATCTTAAAATaGGAATCAGCTTCTGGAAAA +
Preference number: 2 (lower is better)
Translates to: AELTSLIHKNHVAHRSFPSPILK*ESASGK
Trigger: TTTTCCAGAAGCTGATTCCCATTTTAAGATGGGGGA...AGGAAAGGAGCGATGGGCGACGTGATTTTTATGGATTAGACTGGTGAGTTCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CCA 90 bp GCAGAACTCACCAGTCTAATCCATAAAAATCACGTCGCCCATCGCTCCTTTCCTGGGAAAGACAAGCTTTaGCATCACCACAGATTTTTA +
Preference number: 2 (lower is better)
Translates to: AELTSLIHKNHVAHRSFPGKDKL*HHHRFL
Trigger: TAAAAATCTGTGGTGATGCCAAAGCTTGTCTTTCCC...AGGAAAGGAGCGATGGGCGACGTGATTTTTATGGATTAGACTGGTGAGTTCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR TCA 90 bp AGCATTACATACCACCCATTCTCCACAGTTTGTTGCAAAGACCAGCAAACACTGGAGACATCGCTCAAATaGCAGAACCAACAAATACAG +
Preference number: 2 (lower is better)
Translates to: SITYHPFSTVCCKDQQTLETSLK*QNQQIQ
Trigger: CTGTATTTGTTGGTTCTGTCATTTGAGCGATGTCTC...CAGTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAATGGGTGGTATGTAATGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR GCA 90 bp GCAGCTAACATTTTCTCGAAGGGCCAGACGCTAAATATTTTAGGCCTTTGTGAGGTCTCTGGGCTAGAATaGTCATATACTATTTTCGGC +
Preference number: 2 (lower is better)
Translates to: AANIFSKGQTLNILGLCEVSGLE*SYTIFG
Trigger: GCCGAAAATAGTATATGAGCATTCTAGCCCAGAGAC...CTCACAAAGGCCTAAAATATTTAGCGTCTGGCCCTTCGAGAAAATGTTAGCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CCA 90 bp AAAGCATTACATACCACCCATTCTCCACAGTTTGTTGCAAAGACCAGCAAACACTTTCAGCTGGTGTCTTaGACAGGCACTATCAGTATC +
Preference number: 2 (lower is better)
Translates to: KALHTTHSPQFVAKTSKHFQLVS*TGTISI
Trigger: GATACTGATAGTGCCTGTCCAAGACACCAGCTGAAA...GTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAATGGGTGGTATGTAATGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR TCA 90 bp AAAGCATTACATACCACCCATTCTCCACAGTTTGTTGCAAAGACCAGCAAACACGAGACATCGCTCAAATaGCAGAACCAACAAATACAG +
Preference number: 2 (lower is better)
Translates to: KALHTTHSPQFVAKTSKHETSLK*QNQQIQ
Trigger: CTGTATTTGTTGGTTCTGTCATTTGAGCGATGTCTC...GTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAATGGGTGGTATGTAATGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR TCA 90 bp CCTGCCCTCCAATCTGCAGTATGCCATATTAATGATTTTCTCCCAAAGCGATGGATAAGAAGCCAGAAATaGATTACGACCAACTGCAAA +
Preference number: 2 (lower is better)
Translates to: PALQSAVCHINDFLPKRWIRSQK*ITTNCK
Trigger: TTTGCAGTTGGTCGTAATTCATTTCTGGCTTCTTAT...CCATCGCTTTGGGAGAAAATCATTAATATGGCATACTGCAGATTGGAGGGCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR TCA 90 bp AAAGCATTACATACCACCCATTCTCCACAGTTTGTTGCAAAGACCAGCAAACACTGGTACTCAGGAAGCTaGATGACCTCAACATATATC +
Preference number: 2 (lower is better)
Translates to: KALHTTHSPQFVAKTSKHWYSGS*MTSTYI
Trigger: GATATATGTTGAGGTCATTCAGCTTCCTGAGTACCA...GTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAATGGGTGGTATGTAATGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR GCA 90 bp CAGTATCAGAAACATCTTAGGTCTATTTTCCAAAACCCTATCTTATCAGGCATACTCAGGGTGGCAAACTaGAGTCCAAACACACTCCAG +
Preference number: 2 (lower is better)
Translates to: QYQKHLRSIFQNPILSGILRVAN*SPNTLQ
Trigger: CTGGAGTGTGTTTGGACTGCAGTTTGCCACCCTGAG...TATGCCTGATAAGATAGGGTTTTGGAAAATAGACCTAAGATGTTTCTGATACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR GCA 90 bp GCAGAACTCACCAGTCTAATCCATAAAAATCACGTCGCCCATCGCTCCTTTCCTGTTCCTTTTGCTTTTTaGCATAACTCTTATTGTCCT +
Preference number: 2 (lower is better)
Translates to: AELTSLIHKNHVAHRSFPVPFAF*HNSYCP
Trigger: AGGACAATAAGAGTTATGGCAAAAAGCAAAAGGAAC...AGGAAAGGAGCGATGGGCGACGTGATTTTTATGGATTAGACTGGTGAGTTCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CCA 90 bp AGCATTACATACCACCCATTCTCCACAGTTTGTTGCAAAGACCAGCAAACACTGTCCCCCATCTTAAAATaGGAATCAGCTTCTGGAAAA +
Preference number: 2 (lower is better)
Translates to: SITYHPFSTVCCKDQQTLSPILK*ESASGK
Trigger: TTTTCCAGAAGCTGATTCCCATTTTAAGATGGGGGA...CAGTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAATGGGTGGTATGTAATGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CCA 90 bp CAGTATCAGAAACATCTTAGGTCTATTTTCCAAAACCCTATCTTATCAGGCATAGGGGACTTCCTGCTGTaGATACCCTTTCCAGTGTTG +
Preference number: 2 (lower is better)
Translates to: QYQKHLRSIFQNPILSGIGDFLL*IPFPVL
Trigger: CAACACTGGAAAGGGTATCCACAGCAGGAAGTCCCC...TATGCCTGATAAGATAGGGTTTTGGAAAATAGACCTAAGATGTTTCTGATACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CCA 90 bp GCAGAACTCACCAGTCTAATCCATAAAAATCACGTCGCCCATCGCTCCTTTCCTTACTATTTTCGGCTTTaGCTTTTTGTCCTAGATAGT +
Preference number: 2 (lower is better)
Translates to: AELTSLIHKNHVAHRSFPYYFRL*LFVLDS
Trigger: ACTATCTAGGACAAAAAGCCAAAGCCGAAAATAGTA...AGGAAAGGAGCGATGGGCGACGTGATTTTTATGGATTAGACTGGTGAGTTCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR CAA 90 bp GTCAGAGACATCGCTCAAATGACAGAACCAACAAATACAGATGCTTaGCATCAAGGAAATGAATCTACTGAAGAAATGCAACTGAGGAGC +
Preference number: 2 (lower is better)
Translates to: VRDIAQMTEPTNTDA*HQGNESTEEMQLRS
Trigger: GCTCCTCAGTTGCATTTCTTCAGTAGATTCATTTCCTTGATGCAAAGCATCTGTATTTGTTGGTTCTGTCATTTGAGCGATGTCTCTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR GCA 90 bp AGCATTACATACCACCCATTCTCCACAGTTTGTTGCAAAGACCAGCAAACACTGGTAACTGTGATTAGCTaGTACTCTCAGCAATATAAA +
Preference number: 2 (lower is better)
Translates to: SITYHPFSTVCCKDQQTLVTVIS*YSQQYK
Trigger: TTTATATTGCTGAGAGTAGCAGCTAATCACAGTTAC...CAGTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAATGGGTGGTATGTAATGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CCA 90 bp GCAGCTAACATTTTCTCGAAGGGCCAGACGCTAAATATTTTAGGCCTTTGTGAGTACTATTTTCGGCTTTaGCTTTTTGTCCTAGATAGT +
Preference number: 2 (lower is better)
Translates to: AANIFSKGQTLNILGLCEYYFRL*LFVLDS
Trigger: ACTATCTAGGACAAAAAGCCAAAGCCGAAAATAGTA...CTCACAAAGGCCTAAAATATTTAGCGTCTGGCCCTTCGAGAAAATGTTAGCTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR GCA 90 bp CAGTATCAGAAACATCTTAGGTCTATTTTCCAAAACCCTATCTTATCAGGCATACCTCTTCCCACAGACTaGTTATTCATTGCAACAGAG +
Preference number: 2 (lower is better)
Translates to: QYQKHLRSIFQNPILSGIPLPTD*LFIATE
Trigger: CTCTGTTGCAATGAATAAGCAGTCTGTGGGAAGAGG...TATGCCTGATAAGATAGGGTTTTGGAAAATAGACCTAAGATGTTTCTGATACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CCA 90 bp CAGTATCAGAAACATCTTAGGTCTATTTTCCAAAACCCTATCTTATCAGGCATAAACAAGTCTTTCAGCTaGTGTCTTGGACAGGCACTA +
Preference number: 2 (lower is better)
Translates to: QYQKHLRSIFQNPILSGINKSFS*CLGQAL
Trigger: TAGTGCCTGTCCAAGACACCAGCTGAAAGACTTGTT...TATGCCTGATAAGATAGGGTTTTGGAAAATAGACCTAAGATGTTTCTGATACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR CAA 90 bp TTTCAGAACTATTTTGTACACAAAACAAGTCTTTCAGCTGGTGTCTaGGACAGGCACTATCAGTATCAATCAATGGAATTCAAGCTGTTG +
Preference number: 2 (lower is better)
Translates to: FQNYFVHKTSLSAGV*DRHYQYQSMEFKLL
Trigger: CAACAGCTTGAATTCCATTGATTGATACTGATAGTGCCTGTCCAAGACACCAGCTGAAAGACTTGTTTTGTGTACAAAATAGTTCTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR TCA 90 bp CAGTATCAGAAACATCTTAGGTCTATTTTCCAAAACCCTATCTTATCAGGCATATGGTACTCAGGAAGCTaGATGACCTCAACATATATC +
Preference number: 2 (lower is better)
Translates to: QYQKHLRSIFQNPILSGIWYSGS*MTSTYI
Trigger: GATATATGTTGAGGTCATTCAGCTTCCTGAGTACCA...TATGCCTGATAAGATAGGGTTTTGGAAAATAGACCTAAGATGTTTCTGATACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CCA 90 bp CAGTATCAGAAACATCTTAGGTCTATTTTCCAAAACCCTATCTTATCAGGCATATTGTCCAGGTCACTTTaGGTCACTTGGTTCTTTCAT +
Preference number: 2 (lower is better)
Translates to: QYQKHLRSIFQNPILSGILSRSL*VTWFFH
Trigger: ATGAAAGAACCAAGTGACCCAAAGTGACCTGGACAA...TATGCCTGATAAGATAGGGTTTTGGAAAATAGACCTAAGATGTTTCTGATACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR GCA 90 bp CAAAACCAAGCAATTATAAGTCCTCTGAAGCATGTAACTGTGATTAGCTGCTACGTTCCTTTTGCTTTTTaGCATAACTCTTATTGTCCT +
Preference number: 2 (lower is better)
Translates to: QNQAIISPLKHVTVISCYVPFAF*HNSYCP
Trigger: AGGACAATAAGAGTTATGGCAAAAAGCAAAAGGAAC...GTAGCAGCTAATCACAGTTACATGCTTCAGAGGACTTATAATTGCTTGGTTTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR TCA 90 bp CAGTATCAGAAACATCTTAGGTCTATTTTCCAAAACCCTATCTTATCAGGCATAATAAGAAGCCAGAAATaGATTACGACCAACTGCAAA +
Preference number: 2 (lower is better)
Translates to: QYQKHLRSIFQNPILSGIIRSQK*ITTNCK
Trigger: TTTGCAGTTGGTCGTAATTCATTTCTGGCTTCTTAT...TATGCCTGATAAGATAGGGTTTTGGAAAATAGACCTAAGATGTTTCTGATACTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR GCA 90 bp CAGTATCAGAAACATCTTAGGTCTATTTTCCAAAACCCTATCTTATCAGGCATAAAATGCAATGAAATCTaGTTGCAGGAAAGCATAAGA +
Preference number: 2 (lower is better)
Translates to: QYQKHLRSIFQNPILSGIKCNEI*LQESIR
Trigger: TCTTATGCTTTCCTGCAAGCAGATTTCATTGCATTT...TATGCCTGATAAGATAGGGTTTTGGAAAATAGACCTAAGATGTTTCTGATACTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR CCA 72 bp GAGCTGAGCTTCTGGTGGAACGGCGAGGCCCCCTTCTaGGCAGAGGCACACAGTGCGCCCAGAGGGCTGTGC +
Preference number: 3 (lower is better)
Translates to: ELSFWWNGEAPF*AEAHSAPRGLC
Trigger: GCACAGCCCTCTGGGCGCACTGTGTGCCTCTGCCCAGAAGGGGGCCTCGCCGTTCCACCAGAAGCTCAGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR CCA 72 bp GCTGTGCAAAGCTGCCCTGTAGTCATGGAGGTGAACTaGGGACTTCCTGCTGTGGATACCCTTTCCAGTGTT +
Preference number: 3 (lower is better)
Translates to: AVQSCPVVMEVN*GLPAVDTLSSV
Trigger: AACACTGGAAAGGGTATCCACAGCAGGAAGTCCCCAGTTCACCTCCATGACTACAGGGCAGCTTTGCACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR CCA 72 bp AAGGCAGAGAAACCAATTCCTGGTGTCTGGTTTCCCTaGGGCTATAAGGCCAGTTCACGTAGGACCACTGGG +
Preference number: 3 (lower is better)
Translates to: KAEKPIPGVWFP*GYKASSRRTTG
Trigger: CCCAGTGGTCCTACGTGAACTGGCCTTATAGCCCCAGGGAAACCAGACACCAGGAATTGGTTTCTCTGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CAA 90 bp CTAAAGCTGGGCTGTATAGGCCCATCAAGAATGGGGGCCAAGGTGGAGGCCTGGTGCAATGAAATCTGCTaGCAGGAAAGCATAAGAAGC +
Preference number: 3 (lower is better)
Translates to: LKLGCIGPSRMGAKVEAWCNEIC*QESIRS
Trigger: GCTTCTTATGCTTTCCTGCAAGCAGATTTCATTGCA...CCAGGCCTCCACCTTGGCCCCCATTCTTGATGGGCCTATACAGCCCAGCTTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CAA 90 bp GCAGAACTCACCAGTCTAATCCATAAAAATCACGTCGCCCATCGCTCCTTTCCTAGGAGGAAGGATTGCTaGAGCCAGGTTGAGGCTGCA +
Preference number: 3 (lower is better)
Translates to: AELTSLIHKNHVAHRSFPRRKDC*SQVEAA
Trigger: TGCAGCCTCAACCTGGCTCAAGCAATCCTTCCTCCT...AGGAAAGGAGCGATGGGCGACGTGATTTTTATGGATTAGACTGGTGAGTTCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR TCA 72 bp CACCTTGGTGTGACGGCCTTTGTGTGCCTCCAGATGTaGTATCCTGTGAGGAACTTAACATCAACCAGCACC +
Preference number: 3 (lower is better)
Translates to: HLGVTAFVCLQM*YPVRNLTSTST
Trigger: GGTGCTGGTTGATGTTAAGTTCCTCACAGGATATCACATCTGGAGGCACACAAAGGCCGTCACACCAAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR CCA 72 bp TCTGGCCACACATTCTCTAAGAAGTCAGCACTTGCCTaGACTGGGCACTTGTGGCTAGAAGGGTATGCACTA +
Preference number: 3 (lower is better)
Translates to: SGHTFSKKSALA*TGHLWLEGYAL
Trigger: TAGTGCATACCCTTCTAGCCACAAGTGCCCAGTCCAGGCAAGTGCTGACTTCTTAGAGAATGTGTGGCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CAA 90 bp AGCATTACATACCACCCATTCTCCACAGTTTGTTGCAAAGACCAGCAAACACTGGCCTGGACTGGGCACTaGTGGCTAGAAGGGTATGCA +
Preference number: 3 (lower is better)
Translates to: SITYHPFSTVCCKDQQTLAWTGH*WLEGYA
Trigger: TGCATACCCTTCTAGCCACAAGTGCCCAGTCCAGGC...CAGTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAATGGGTGGTATGTAATGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CAA 90 bp GCAGCTAACATTTTCTCGAAGGGCCAGACGCTAAATATTTTAGGCCTTTGTGAGGCCTGGACTGGGCACTaGTGGCTAGAAGGGTATGCA +
Preference number: 3 (lower is better)
Translates to: AANIFSKGQTLNILGLCEAWTGH*WLEGYA
Trigger: TGCATACCCTTCTAGCCACAAGTGCCCAGTCCAGGC...CTCACAAAGGCCTAAAATATTTAGCGTCTGGCCCTTCGAGAAAATGTTAGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CAA 90 bp GCAGAACTCACCAGTCTAATCCATAAAAATCACGTCGCCCATCGCTCCTTTCCTCTAAGAAGTCAGCACTaGCCTGGACTGGGCACTTGT +
Preference number: 3 (lower is better)
Translates to: AELTSLIHKNHVAHRSFPLRSQH*PGLGTC
Trigger: ACAAGTGCCCAGTCCAGGCAAGTGCTGACTTCTTAG...AGGAAAGGAGCGATGGGCGACGTGATTTTTATGGATTAGACTGGTGAGTTCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CAA 90 bp GTGCAAAGCTGCCCTGTAGTCATGGAGGTGAACTGGGGACTTCCTGCTGTGGATCATATCCATCTCCCCTaGCTAGAATATAAGCTCCAT +
Preference number: 3 (lower is better)
Translates to: VQSCPVVMEVNWGLPAVDHIHLP*LEYKLH
Trigger: ATGGAGCTTATATTCTAGCAAGGGGAGATGGATATG...ATCCACAGCAGGAAGTCCCCAGTTCACCTCCATGACTACAGGGCAGCTTTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR GCA 72 bp CTGCCCTGTAGTCATGGAGGTGAACTGGGGACTTCCTaGTGTGGATACCCTTTCCAGTGTTGTGTTCAAAAT +
Preference number: 3 (lower is better)
Translates to: LPCSHGGELGTS*CGYPFQCCVQN
Trigger: ATTTTGAACACAACACTGGAAAGGGTATCCACAGCAGGAAGTCCCCAGTTCACCTCCATGACTACAGGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR TCA 72 bp CTTGACCAGATGACCAAAATTGACATCACCTTGGTGTaGCGGCCTTTGTGTGCCTCCAGATGTGATATCCTG +
Preference number: 3 (lower is better)
Translates to: LDQMTKIDITLV*RPLCASRCDIL
Trigger: CAGGATATCACATCTGGAGGCACACAAAGGCCGTCACACCAAGGTGATGTCAATTTTGGTCATCTGGTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CAA 90 bp GCTATAAGGCCAGTTCACGTAGGACCACTGGGAAAGACAAGCTTTGGCATCACCGTCACTTTGGGTCACTaGGTTCTTTCATCAGAACAT +
Preference number: 3 (lower is better)
Translates to: AIRPVHVGPLGKTSFGITVTLGH*VLSSEH
Trigger: ATGTTCTGATGAAAGAACCAAGTGACCCAAAGTGAC...GGTGATGCCAAAGCTTGTCTTTCCCAGTGGTCCTACGTGAACTGGCCTTATAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CAA 90 bp GCAGAACTCACCAGTCTAATCCATAAAAATCACGTCGCCCATCGCTCCTTTCCTCTTGTCCAGGTCACTTaGGGTCACTTGGTTCTTTCA +
Preference number: 3 (lower is better)
Translates to: AELTSLIHKNHVAHRSFPLVQVT*GHLVLS
Trigger: TGAAAGAACCAAGTGACCCAAAGTGACCTGGACAAG...AGGAAAGGAGCGATGGGCGACGTGATTTTTATGGATTAGACTGGTGAGTTCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CAA 90 bp GCAGCTAACATTTTCTCGAAGGGCCAGACGCTAAATATTTTAGGCCTTTGTGAGCTAAGAAGTCAGCACTaGCCTGGACTGGGCACTTGT +
Preference number: 3 (lower is better)
Translates to: AANIFSKGQTLNILGLCELRSQH*PGLGTC
Trigger: ACAAGTGCCCAGTCCAGGCAAGTGCTGACTTCTTAG...CTCACAAAGGCCTAAAATATTTAGCGTCTGGCCCTTCGAGAAAATGTTAGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CAA 90 bp GCTATAAGGCCAGTTCACGTAGGACCACTGGGAAAGACAAGCTTTGGCATCACCCATATCCATCTCCCCTaGCTAGAATATAAGCTCCAT +
Preference number: 3 (lower is better)
Translates to: AIRPVHVGPLGKTSFGITHIHLP*LEYKLH
Trigger: ATGGAGCTTATATTCTAGCAAGGGGAGATGGATATG...GGTGATGCCAAAGCTTGTCTTTCCCAGTGGTCCTACGTGAACTGGCCTTATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CAA 90 bp GCTATAAGGCCAGTTCACGTAGGACCACTGGGAAAGACAAGCTTTGGCATCACCATTCTCCACAGTTTGTaGCAAAGACCAGCAAACACT +
Preference number: 3 (lower is better)
Translates to: AIRPVHVGPLGKTSFGITILHSL*QRPANT
Trigger: AGTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAAT...GGTGATGCCAAAGCTTGTCTTTCCCAGTGGTCCTACGTGAACTGGCCTTATAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CAA 90 bp GCTATAAGGCCAGTTCACGTAGGACCACTGGGAAAGACAAGCTTTGGCATCACCCTTTACAGGACATTATaGGGTCAGCTGACAAAACTG +
Preference number: 3 (lower is better)
Translates to: AIRPVHVGPLGKTSFGITLYRTL*GQLTKL
Trigger: CAGTTTTGTCAGCTGACCCAATAATGTCCTGTAAAG...GGTGATGCCAAAGCTTGTCTTTCCCAGTGGTCCTACGTGAACTGGCCTTATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CAA 90 bp GCTATAAGGCCAGTTCACGTAGGACCACTGGGAAAGACAAGCTTTGGCATCACCAGAGTGTTTATCCCATaGGATCACCATAGGTCATCT +
Preference number: 3 (lower is better)
Translates to: AIRPVHVGPLGKTSFGITRVFIP*DHHRSS
Trigger: AGATGACCTATGGTGATCCAATGGGATAAACACTCT...GGTGATGCCAAAGCTTGTCTTTCCCAGTGGTCCTACGTGAACTGGCCTTATAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CAA 90 bp GCTATAAGGCCAGTTCACGTAGGACCACTGGGAAAGACAAGCTTTGGCATCACCATTCCTCACTGTCACTaGGAAATTGCTAGCAGAATT +
Preference number: 3 (lower is better)
Translates to: AIRPVHVGPLGKTSFGITIPHCH*EIASRI
Trigger: AATTCTGCTAGCAATTTCCAAGTGACAGTGAGGAAT...GGTGATGCCAAAGCTTGTCTTTCCCAGTGGTCCTACGTGAACTGGCCTTATAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR TCA 72 bp CAATCACTCAGAATTGTAAGACCCATTTTTAAGTCATaGGTGGTACCGAAACCGGCAGCGGGCTGGATATGG +
Preference number: 3 (lower is better)
Translates to: QSLRIVRPIFKS*VVPKPAAGWIW
Trigger: CCATATCCAGCCCGCTGCCGGTTTCGGTACCACTCATGACTTAAAAATGGGTCTTACAATTCTGAGTGATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CAA 90 bp GCTATAAGGCCAGTTCACGTAGGACCACTGGGAAAGACAAGCTTTGGCATCACCAAGGGTATGCACTACTaGCTAATTTCTAAAACCTCA +
Preference number: 3 (lower is better)
Translates to: AIRPVHVGPLGKTSFGITKGMHY*LISKTS
Trigger: TGAGGTTTTAGAAATTAGCAAGTAGTGCATACCCTT...GGTGATGCCAAAGCTTGTCTTTCCCAGTGGTCCTACGTGAACTGGCCTTATAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CAA 90 bp GCAGCTAACATTTTCTCGAAGGGCCAGACGCTAAATATTTTAGGCCTTTGTGAGCCCATTCTCCACAGTTaGTTGCAAAGACCAGCAAAC +
Preference number: 3 (lower is better)
Translates to: AANIFSKGQTLNILGLCEPILHS*LQRPAN
Trigger: GTTTGCTGGTCTTTGCAACAAACTGTGGAGAATGGG...CTCACAAAGGCCTAAAATATTTAGCGTCTGGCCCTTCGAGAAAATGTTAGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CAA 90 bp GCAGAACTCACCAGTCTAATCCATAAAAATCACGTCGCCCATCGCTCCTTTCCTTGTAGTCTTATTCCTTaGCCAAAAGGCAGAGAAACC +
Preference number: 3 (lower is better)
Translates to: AELTSLIHKNHVAHRSFPCSLIP*PKGRET
Trigger: GGTTTCTCTGCCTTTTGGCAAAGGAATAAGACTACA...AGGAAAGGAGCGATGGGCGACGTGATTTTTATGGATTAGACTGGTGAGTTCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CAA 90 bp CCTGCCCTCCAATCTGCAGTATGCCATATTAATGATTTTCTCCCAAAGCGATGGGTCACTTTGGGTCACTaGGTTCTTTCATCAGAACAT +
Preference number: 3 (lower is better)
Translates to: PALQSAVCHINDFLPKRWVTLGH*VLSSEH
Trigger: ATGTTCTGATGAAAGAACCAAGTGACCCAAAGTGAC...CCATCGCTTTGGGAGAAAATCATTAATATGGCATACTGCAGATTGGAGGGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR CCA 72 bp AATAACTATACTGAAGCATTTCGGGGTAAAGGGCCATaGTGTGTTGTGTTTGTGTGTGTGTGTGTGTGTGTG +
Preference number: 3 (lower is better)
Translates to: NNYTEAFRGKGP*CVVFVCVCVCV
Trigger: CACACACACACACACACACACAAACACAACACACCATGGCCCTTTACCCCGAAATGCTTCAGTATAGTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CAA 90 bp GCAGAACTCACCAGTCTAATCCATAAAAATCACGTCGCCCATCGCTCCTTTCCTAAGGGTATGCACTACTaGCTAATTTCTAAAACCTCA +
Preference number: 3 (lower is better)
Translates to: AELTSLIHKNHVAHRSFPKGMHY*LISKTS
Trigger: TGAGGTTTTAGAAATTAGCAAGTAGTGCATACCCTT...AGGAAAGGAGCGATGGGCGACGTGATTTTTATGGATTAGACTGGTGAGTTCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CAA 90 bp GCAGCTAACATTTTCTCGAAGGGCCAGACGCTAAATATTTTAGGCCTTTGTGAGAGGCAAAACTCCAGGTaGGTTGTCCTACAAATAATC +
Preference number: 3 (lower is better)
Translates to: AANIFSKGQTLNILGLCERQNSR*VVLQII
Trigger: GATTATTTGTAGGACAACCAACCTGGAGTTTTGCCT...CTCACAAAGGCCTAAAATATTTAGCGTCTGGCCCTTCGAGAAAATGTTAGCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CAA 90 bp GCAGCTAACATTTTCTCGAAGGGCCAGACGCTAAATATTTTAGGCCTTTGTGAGAGAGTGTTTATCCCATaGGATCACCATAGGTCATCT +
Preference number: 3 (lower is better)
Translates to: AANIFSKGQTLNILGLCERVFIP*DHHRSS
Trigger: AGATGACCTATGGTGATCCAATGGGATAAACACTCT...CTCACAAAGGCCTAAAATATTTAGCGTCTGGCCCTTCGAGAAAATGTTAGCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR TCA 72 bp TGTCTAAGTAGCTGGGGAATGTGGTACTCAGGAAGCTaGATGACCTCAACATATATCCATAATTCCTCACTG +
Preference number: 3 (lower is better)
Translates to: CLSSWGMWYSGS*MTSTYIHNSSL
Trigger: CAGTGAGGAATTATGGATATATGTTGAGGTCATTCAGCTTCCTGAGTACCACATTCCCCAGCTACTTAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR TCA 72 bp TTTGGTCAAGGAGAGAGCCTTTGTCAAACTACACCATaGAGCCTCCTTAATAGTCATGGATATGTGGTGTTC +
Preference number: 3 (lower is better)
Translates to: FGQGESLCQTTP*SLLNSHGYVVF
Trigger: GAACACCACATATCCATGACTATTAAGGAGGCTTCATGGTGTAGTTTGACAAAGGCTCTCTCCTTGACCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR CCA 72 bp ACGAGCAGCCACAGACAACACAGAAACAAATGGGCATaGCTGTCATCCAATGTAACTTTATTTATGGACACT +
Preference number: 3 (lower is better)
Translates to: TSSHRQHRNKWA*LSSNVTLFMDT
Trigger: AGTGTCCATAAATAAAGTTACATTGGATGACAGCCATGCCCATTTGTTTCTGTGTTGTCTGTGGCTGCTCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CAA 90 bp AAAGCATTACATACCACCCATTCTCCACAGTTTGTTGCAAAGACCAGCAAACACTGCAATGAAATCTGCTaGCAGGAAAGCATAAGAAGC +
Preference number: 3 (lower is better)
Translates to: KALHTTHSPQFVAKTSKHCNEIC*QESIRS
Trigger: GCTTCTTATGCTTTCCTGCAAGCAGATTTCATTGCA...GTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAATGGGTGGTATGTAATGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CAA 90 bp AGCATTACATACCACCCATTCTCCACAGTTTGTTGCAAAGACCAGCAAACACTGACTGTCACTTGGAAATaGCTAGCAGAATTCCATAGA +
Preference number: 3 (lower is better)
Translates to: SITYHPFSTVCCKDQQTLTVTWK*LAEFHR
Trigger: TCTATGGAATTCTGCTAGCAATTTCCAAGTGACAGT...CAGTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAATGGGTGGTATGTAATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR-3UTR CAA 90 bp GCAGCTAACATTTTCTCGAAGGGCCAGACGCTAAATATTTTAGGCCTTTGTGAGACTGTCACTTGGAAATaGCTAGCAGAATTCCATAGA +
Preference number: 3 (lower is better)
Translates to: AANIFSKGQTLNILGLCETVTWK*LAEFHR
Trigger: TCTATGGAATTCTGCTAGCAATTTCCAAGTGACAGT...CTCACAAAGGCCTAAAATATTTAGCGTCTGGCCCTTCGAGAAAATGTTAGCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR TCA 72 bp ACATATGATTCAACGATGTCAACAGCTTTCAGTCTATaGATCTTGTCCAGGTCACTTTGGGTCACTTGGTTC +
Preference number: 3 (lower is better)
Translates to: TYDSTMSTAFSL*ILSRSLWVTWF
Trigger: GAACCAAGTGACCCAAAGTGACCTGGACAAGATTCATAGACTGAAAGCTGTTGACATCGTTGAATCATATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR CCA 72 bp GACCAAATGACAACCTACCTAGAGTGTTTATCCCATTaGATCACCATAGGTCATCTGCAGTATCAGAAACAT +
Preference number: 3 (lower is better)
Translates to: DQMTTYLECLSH*ITIGHLQYQKH
Trigger: ATGTTTCTGATACTGCAGATGACCTATGGTGATCCAATGGGATAAACACTCTAGGTAGGTTGTCATTTGGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR CCA 72 bp CTACACCATGAAGCCTCCTTAATAGTCATGGATATGTaGTGTTCAACCCAATATCCACTTAGAAATCAGGTG +
Preference number: 3 (lower is better)
Translates to: LHHEASLIVMDM*CSTQYPLRNQV
Trigger: CACCTGATTTCTAAGTGGATATTGGGTTGAACACCACATATCCATGACTATTAAGGAGGCTTCATGGTGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR CCA 72 bp CATTCTCCACAGTTTGTTGCAAAGACCAGCAAACACTaGATAACTCTAGCAGCTTCTAAATGTAATCATTTC +
Preference number: 3 (lower is better)
Translates to: HSPQFVAKTSKH*ITLAASKCNHF
Trigger: GAAATGATTACATTTAGAAGCTGCTAGAGTTATCCAGTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR CCA 72 bp CTCTGGGCTAGAATGCTCATATACTATTTTCGGCTTTaGCTTTTTGTCCTAGATAGTCTTCTTATTCACTTT +
Preference number: 3 (lower is better)
Translates to: LWARMLIYYFRL*LFVLDSLLIHF
Trigger: AAAGTGAATAAGAAGACTATCTAGGACAAAAAGCCAAAGCCGAAAATAGTATATGAGCATTCTAGCCCAGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR CCA 72 bp TATTATTTCCTTCATTCTTTTAGTAGCGACAGTCTCTaGGCTAGAATGCTCATATACTATTTTCGGCTTTGG +
Preference number: 3 (lower is better)
Translates to: YYFLHSFSSDSL*ARMLIYYFRLW
Trigger: CCAAAGCCGAAAATAGTATATGAGCATTCTAGCCCAGAGACTGTCGCTACTAAAAGAATGAAGGAAATAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR CCA 72 bp ATTTTGTACACAAAACAAGTCTTTCAGCTGGTGTCTTaGACAGGCACTATCAGTATCAATCAATGGAATTCA +
Preference number: 3 (lower is better)
Translates to: ILYTKQVFQLVS*TGTISINQWNS
Trigger: TGAATTCCATTGATTGATACTGATAGTGCCTGTCCAAGACACCAGCTGAAAGACTTGTTTTGTGTACAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR GCA 72 bp ATGATACTCCAAATACAACACAGGAAGAGATGGTTGTaGCAAGTAACAAGAAAGCACAAAGATATTTTAACA +
Preference number: 3 (lower is better)
Translates to: MILQIQHRKRWL*QVTRKHKDILT
Trigger: TGTTAAAATATCTTTGTGCTTTCTTGTTACTTGGCACAACCATCTCTTCCTGTGTTGTATTTGGAGTATCAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp CTAAAGCTGGGCTGTATAGGCCCATCAAGAATGGGGGCCAAGGTGGAGGCCTGGCTGGAGCTGAGCTTCTaGTGGAACGGCGAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: LKLGCIGPSRMGAKVEAWLELSF*WNGEAP
Trigger: GGGGGCCTCGCCGTTCCACCAGAAGCTCAGCTCCAG...CCAGGCCTCCACCTTGGCCCCCATTCTTGATGGGCCTATACAGCCCAGCTTTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR GCA 90 bp CTAAAGCTGGGCTGTATAGGCCCATCAAGAATGGGGGCCAAGGTGGAGGCCTGGCTTTTCGGTCTCCTCTaGCGACACCGAGCACGCGCC +
Preference number: 4 (lower is better)
Translates to: LKLGCIGPSRMGAKVEAWLFGLL*RHRARA
Trigger: GGCGCGTGCTCGGTGTCGGCAGAGGAGACCGAAAAG...CCAGGCCTCCACCTTGGCCCCCATTCTTGATGGGCCTATACAGCCCAGCTTTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000237283.9
CDS-3UTR CCA 90 bp GCTATAAGGCCAGTTCACGTAGGACCACTGGGAAAGACAAGCTTTGGCATCACCGGCGAGGCCCCCTTCTaGGCAGAGGCACACAGTGCG +
Preference number: 4 (lower is better)
Translates to: AIRPVHVGPLGKTSFGITGEAPF*AEAHSA
Trigger: CGCACTGTGTGCCTCTGCCCAGAAGGGGGCCTCGCC...GGTGATGCCAAAGCTTGTCTTTCCCAGTGGTCCTACGTGAACTGGCCTTATAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR TCA 90 bp GCTATAAGGCCAGTTCACGTAGGACCACTGGGAAAGACAAGCTTTGGCATCACCTCCAGGGCCTGGAGCTaGGCTTCTGGTGGAACGGCG +
Preference number: 4 (lower is better)
Translates to: AIRPVHVGPLGKTSFGITSRAWS*ASGGTA
Trigger: CGCCGTTCCACCAGAAGCTCAGCTCCAGGCCCTGGA...GGTGATGCCAAAGCTTGTCTTTCCCAGTGGTCCTACGTGAACTGGCCTTATAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp GCTATAAGGCCAGTTCACGTAGGACCACTGGGAAAGACAAGCTTTGGCATCACCCGCTTGCAGCTGGCTTaGGTGCCGCCTTCGCCTCCA +
Preference number: 4 (lower is better)
Translates to: AIRPVHVGPLGKTSFGITRLQLA*VPPSPP
Trigger: TGGAGGCGAAGGCGGCACCCAAGCCAGCTGCAAGCG...GGTGATGCCAAAGCTTGTCTTTCCCAGTGGTCCTACGTGAACTGGCCTTATAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237283.9
CDS-3UTR CCA 90 bp CCTGCCCTCCAATCTGCAGTATGCCATATTAATGATTTTCTCCCAAAGCGATGGCGCGCCGCTTGCAGCTaGCTTGGGTGCCGCCTTCGC +
Preference number: 4 (lower is better)
Translates to: PALQSAVCHINDFLPKRWRAACS*LGCRLR
Trigger: GCGAAGGCGGCACCCAAGCCAGCTGCAAGCGGCGCG...CCATCGCTTTGGGAGAAAATCATTAATATGGCATACTGCAGATTGGAGGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237283.9
CDS-3UTR CCA 90 bp GTGCAAAGCTGCCCTGTAGTCATGGAGGTGAACTGGGGACTTCCTGCTGTGGATCAGCCCCCAGTGCCCTaGAAGAACATCGTAGCTGCA +
Preference number: 4 (lower is better)
Translates to: VQSCPVVMEVNWGLPAVDQPPVP*KNIVAA
Trigger: TGCAGCTACGATGTTCTTCCAGGGCACTGGGGGCTG...ATCCACAGCAGGAAGTCCCCAGTTCACCTCCATGACTACAGGGCAGCTTTGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp CTAAAGCTGGGCTGTATAGGCCCATCAAGAATGGGGGCCAAGGTGGAGGCCTGGGGAAGCTTCCACTCATaGCAGAAGGCAATGGGAGCA +
Preference number: 4 (lower is better)
Translates to: LKLGCIGPSRMGAKVEAWGSFHS*QKAMGA
Trigger: TGCTCCCATTGCCTTCTGCCATGAGTGGAAGCTTCC...CCAGGCCTCCACCTTGGCCCCCATTCTTGATGGGCCTATACAGCCCAGCTTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606514.5
CDS-3UTR TCA 90 bp GTGCAAAGCTGCCCTGTAGTCATGGAGGTGAACTGGGGACTTCCTGCTGTGGATCTGAAGAAATGCAACTaGGGAGCAGCAGCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: VQSCPVVMEVNWGLPAVDLKKCN*GAAAPP
Trigger: TGGAGGGGCTGCTGCTCCTCAGTTGCATTTCTTCAG...ATCCACAGCAGGAAGTCCCCAGTTCACCTCCATGACTACAGGGCAGCTTTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR TCA 90 bp CTAAAGCTGGGCTGTATAGGCCCATCAAGAATGGGGGCCAAGGTGGAGGCCTGGAGAGGACTTAGGGCCTaGCTGAAGTTTGGTCAAGGA +
Preference number: 4 (lower is better)
Translates to: LKLGCIGPSRMGAKVEAWRGLRA*LKFGQG
Trigger: TCCTTGACCAAACTTCAGTCAGGCCCTAAGTCCTCT...CCAGGCCTCCACCTTGGCCCCCATTCTTGATGGGCCTATACAGCCCAGCTTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR GCA 90 bp AGCATTACATACCACCCATTCTCCACAGTTTGTTGCAAAGACCAGCAAACACTGCGAGCACGCGCCGCTTaGAGCTGGCTTGGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: SITYHPFSTVCCKDQQTLRARAA*SWLGCR
Trigger: GCGGCACCCAAGCCAGCTGCAAGCGGCGCGTGCTCG...CAGTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAATGGGTGGTATGTAATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237283.9
CDS-3UTR TCA 90 bp GTGCAAAGCTGCCCTGTAGTCATGGAGGTGAACTGGGGACTTCCTGCTGTGGATTTAGGTGTGGTGACATaGGTCTGTGGTCCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: VQSCPVVMEVNWGLPAVDLGVVT*VCGPSY
Trigger: GTAGCTGGGACCACAGACTCATGTCACCACACCTAA...ATCCACAGCAGGAAGTCCCCAGTTCACCTCCATGACTACAGGGCAGCTTTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp GTGCAAAGCTGCCCTGTAGTCATGGAGGTGAACTGGGGACTTCCTGCTGTGGATGTCATGGAGGTGAACTaGGGACTTCCTGCTGTGGAT +
Preference number: 4 (lower is better)
Translates to: VQSCPVVMEVNWGLPAVDVMEVN*GLPAVD
Trigger: ATCCACAGCAGGAAGTCCCCAGTTCACCTCCATGAC...ATCCACAGCAGGAAGTCCCCAGTTCACCTCCATGACTACAGGGCAGCTTTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp GCTATAAGGCCAGTTCACGTAGGACCACTGGGAAAGACAAGCTTTGGCATCACCGCAGCGGGCTGGATATaGCCCATGGGCCATACTTTG +
Preference number: 4 (lower is better)
Translates to: AIRPVHVGPLGKTSFGITAAGWI*PMGHTL
Trigger: CAAAGTATGGCCCATGGGCCATATCCAGCCCGCTGC...GGTGATGCCAAAGCTTGTCTTTCCCAGTGGTCCTACGTGAACTGGCCTTATAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR TCA 90 bp AGCATTACATACCACCCATTCTCCACAGTTTGTTGCAAAGACCAGCAAACACTGTCCAGGGCCTGGAGCTaGGCTTCTGGTGGAACGGCG +
Preference number: 4 (lower is better)
Translates to: SITYHPFSTVCCKDQQTLSRAWS*ASGGTA
Trigger: CGCCGTTCCACCAGAAGCTCAGCTCCAGGCCCTGGA...CAGTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAATGGGTGGTATGTAATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR TCA 90 bp GCTATAAGGCCAGTTCACGTAGGACCACTGGGAAAGACAAGCTTTGGCATCACCAGGTTGAGGCTGCAGTaGGCTGTGATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: AIRPVHVGPLGKTSFGITRLRLQ*AVIMPL
Trigger: CAGTGGCATGATCACAGCTCACTGCAGCCTCAACCT...GGTGATGCCAAAGCTTGTCTTTCCCAGTGGTCCTACGTGAACTGGCCTTATAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR TCA 90 bp GTGCAAAGCTGCCCTGTAGTCATGGAGGTGAACTGGGGACTTCCTGCTGTGGATGACTTAGGGCCTGACTaGAGTTTGGTCAAGGAGAGA +
Preference number: 4 (lower is better)
Translates to: VQSCPVVMEVNWGLPAVDDLGPD*SLVKER
Trigger: TCTCTCCTTGACCAAACTTCAGTCAGGCCCTAAGTC...ATCCACAGCAGGAAGTCCCCAGTTCACCTCCATGACTACAGGGCAGCTTTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR GCA 90 bp CCTGCCCTCCAATCTGCAGTATGCCATATTAATGATTTTCTCCCAAAGCGATGGTGCAGCTGGCTTGGGTaGCGCCTTCGCCTCCATACC +
Preference number: 4 (lower is better)
Translates to: PALQSAVCHINDFLPKRWCSWLG*RLRLHT
Trigger: GGTATGGAGGCGAAGGCGGCACCCAAGCCAGCTGCA...CCATCGCTTTGGGAGAAAATCATTAATATGGCATACTGCAGATTGGAGGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237283.9
CDS-3UTR CCA 90 bp GTGCAAAGCTGCCCTGTAGTCATGGAGGTGAACTGGGGACTTCCTGCTGTGGATTGGACTGGGCACTTGTaGCTAGAAGGGTATGCACTA +
Preference number: 4 (lower is better)
Translates to: VQSCPVVMEVNWGLPAVDWTGHL*LEGYAL
Trigger: TAGTGCATACCCTTCTAGCCACAAGTGCCCAGTCCA...ATCCACAGCAGGAAGTCCCCAGTTCACCTCCATGACTACAGGGCAGCTTTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR TCA 90 bp CTAAAGCTGGGCTGTATAGGCCCATCAAGAATGGGGGCCAAGGTGGAGGCCTGGGAGACATCGCTCAAATaGCAGAACCAACAAATACAG +
Preference number: 4 (lower is better)
Translates to: LKLGCIGPSRMGAKVEAWETSLK*QNQQIQ
Trigger: CTGTATTTGTTGGTTCTGTCATTTGAGCGATGTCTC...CCAGGCCTCCACCTTGGCCCCCATTCTTGATGGGCCTATACAGCCCAGCTTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR GCA 90 bp GTGCAAAGCTGCCCTGTAGTCATGGAGGTGAACTGGGGACTTCCTGCTGTGGATCTACTGGACATAAGATaGTCAGCCAGACTTACTGGG +
Preference number: 4 (lower is better)
Translates to: VQSCPVVMEVNWGLPAVDLLDIR*SARLTG
Trigger: CCCAGTAAGTCTGGCTGAGCATCTTATGTCCAGTAG...ATCCACAGCAGGAAGTCCCCAGTTCACCTCCATGACTACAGGGCAGCTTTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp GCAGAACTCACCAGTCTAATCCATAAAAATCACGTCGCCCATCGCTCCTTTCCTCACACTCCAGGTCCCTaGGTCTGGCCACACATTCTC +
Preference number: 4 (lower is better)
Translates to: AELTSLIHKNHVAHRSFPHTPGP*VWPHIL
Trigger: GAGAATGTGTGGCCAGACCCAGGGACCTGGAGTGTG...AGGAAAGGAGCGATGGGCGACGTGATTTTTATGGATTAGACTGGTGAGTTCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp AGCATTACATACCACCCATTCTCCACAGTTTGTTGCAAAGACCAGCAAACACTGGAGCTGAGCTTCTGGTaGAACGGCGAGGCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: SITYHPFSTVCCKDQQTLELSFW*NGEAPF
Trigger: GAAGGGGGCCTCGCCGTTCCACCAGAAGCTCAGCTC...CAGTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAATGGGTGGTATGTAATGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp CTAAAGCTGGGCTGTATAGGCCCATCAAGAATGGGGGCCAAGGTGGAGGCCTGGGAGTGTTTATCCCATTaGATCACCATAGGTCATCTG +
Preference number: 4 (lower is better)
Translates to: LKLGCIGPSRMGAKVEAWECLSH*ITIGHL
Trigger: CAGATGACCTATGGTGATCCAATGGGATAAACACTC...CCAGGCCTCCACCTTGGCCCCCATTCTTGATGGGCCTATACAGCCCAGCTTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR TCA 90 bp CTAAAGCTGGGCTGTATAGGCCCATCAAGAATGGGGGCCAAGGTGGAGGCCTGGTGTCAAACTACACCATaGAGCCTCCTTAATAGTCAT +
Preference number: 4 (lower is better)
Translates to: LKLGCIGPSRMGAKVEAWCQTTP*SLLNSH
Trigger: ATGACTATTAAGGAGGCTTCATGGTGTAGTTTGACA...CCAGGCCTCCACCTTGGCCCCCATTCTTGATGGGCCTATACAGCCCAGCTTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp CTAAAGCTGGGCTGTATAGGCCCATCAAGAATGGGGGCCAAGGTGGAGGCCTGGTCCCCCATCTTAAAATaGGAATCAGCTTCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: LKLGCIGPSRMGAKVEAWSPILK*ESASGK
Trigger: TTTTCCAGAAGCTGATTCCCATTTTAAGATGGGGGA...CCAGGCCTCCACCTTGGCCCCCATTCTTGATGGGCCTATACAGCCCAGCTTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp CAAAACCAAGCAATTATAAGTCCTCTGAAGCATGTAACTGTGATTAGCTGCTACGGCGAGGCCCCCTTCTaGGCAGAGGCACACAGTGCG +
Preference number: 4 (lower is better)
Translates to: QNQAIISPLKHVTVISCYGEAPF*AEAHSA
Trigger: CGCACTGTGTGCCTCTGCCCAGAAGGGGGCCTCGCC...GTAGCAGCTAATCACAGTTACATGCTTCAGAGGACTTATAATTGCTTGGTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp GTGCAAAGCTGCCCTGTAGTCATGGAGGTGAACTGGGGACTTCCTGCTGTGGATAGTAGCGACAGTCTCTaGGCTAGAATGCTCATATAC +
Preference number: 4 (lower is better)
Translates to: VQSCPVVMEVNWGLPAVDSSDSL*ARMLIY
Trigger: GTATATGAGCATTCTAGCCCAGAGACTGTCGCTACT...ATCCACAGCAGGAAGTCCCCAGTTCACCTCCATGACTACAGGGCAGCTTTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp GCTATAAGGCCAGTTCACGTAGGACCACTGGGAAAGACAAGCTTTGGCATCACCAGAGAAACCAATTCCTaGTGTCTGGTTTCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: AIRPVHVGPLGKTSFGITRETNS*CLVSLG
Trigger: CCCCAGGGAAACCAGACACCAGGAATTGGTTTCTCT...GGTGATGCCAAAGCTTGTCTTTCCCAGTGGTCCTACGTGAACTGGCCTTATAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR TCA 90 bp CCTGCCCTCCAATCTGCAGTATGCCATATTAATGATTTTCTCCCAAAGCGATGGGGACTCTTGCCACTTTaGCGACACCAATCGAGGACC +
Preference number: 4 (lower is better)
Translates to: PALQSAVCHINDFLPKRWGLLPL*RHQSRT
Trigger: GGTCCTCGATTGGTGTCGTCAAAGTGGCAAGAGTCC...CCATCGCTTTGGGAGAAAATCATTAATATGGCATACTGCAGATTGGAGGGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR TCA 90 bp CTAAAGCTGGGCTGTATAGGCCCATCAAGAATGGGGGCCAAGGTGGAGGCCTGGATAAGAAGCCAGAAATaGATTACGACCAACTGCAAA +
Preference number: 4 (lower is better)
Translates to: LKLGCIGPSRMGAKVEAWIRSQK*ITTNCK
Trigger: TTTGCAGTTGGTCGTAATTCATTTCTGGCTTCTTAT...CCAGGCCTCCACCTTGGCCCCCATTCTTGATGGGCCTATACAGCCCAGCTTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR TCA 90 bp GCAGCTAACATTTTCTCGAAGGGCCAGACGCTAAATATTTTAGGCCTTTGTGAGGGCTGCAGTGAGCTGTaGTCATGCCACTGGACGACA +
Preference number: 4 (lower is better)
Translates to: AANIFSKGQTLNILGLCEGCSEL*SCHWTT
Trigger: TGTCGTCCAGTGGCATGATCACAGCTCACTGCAGCC...CTCACAAAGGCCTAAAATATTTAGCGTCTGGCCCTTCGAGAAAATGTTAGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR GCA 90 bp GCAGAACTCACCAGTCTAATCCATAAAAATCACGTCGCCCATCGCTCCTTTCCTCTCAGGGTGGCAAACTaGAGTCCAAACACACTCCAG +
Preference number: 4 (lower is better)
Translates to: AELTSLIHKNHVAHRSFPLRVAN*SPNTLQ
Trigger: CTGGAGTGTGTTTGGACTGCAGTTTGCCACCCTGAG...AGGAAAGGAGCGATGGGCGACGTGATTTTTATGGATTAGACTGGTGAGTTCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR GCA 90 bp GCTATAAGGCCAGTTCACGTAGGACCACTGGGAAAGACAAGCTTTGGCATCACCCTACTGGACATAAGATaGTCAGCCAGACTTACTGGG +
Preference number: 4 (lower is better)
Translates to: AIRPVHVGPLGKTSFGITLLDIR*SARLTG
Trigger: CCCAGTAAGTCTGGCTGAGCATCTTATGTCCAGTAG...GGTGATGCCAAAGCTTGTCTTTCCCAGTGGTCCTACGTGAACTGGCCTTATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR GCA 90 bp GTGCAAAGCTGCCCTGTAGTCATGGAGGTGAACTGGGGACTTCCTGCTGTGGATGTCTCTGGGCTAGAATaGTCATATACTATTTTCGGC +
Preference number: 4 (lower is better)
Translates to: VQSCPVVMEVNWGLPAVDVSGLE*SYTIFG
Trigger: GCCGAAAATAGTATATGAGCATTCTAGCCCAGAGAC...ATCCACAGCAGGAAGTCCCCAGTTCACCTCCATGACTACAGGGCAGCTTTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR GCA 90 bp GTGCAAAGCTGCCCTGTAGTCATGGAGGTGAACTGGGGACTTCCTGCTGTGGATTTCTCCACAGTTTGTTaGAAAGACCAGCAAACACTG +
Preference number: 4 (lower is better)
Translates to: VQSCPVVMEVNWGLPAVDFSTVC*KDQQTL
Trigger: CAGTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAA...ATCCACAGCAGGAAGTCCCCAGTTCACCTCCATGACTACAGGGCAGCTTTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp CCTGCCCTCCAATCTGCAGTATGCCATATTAATGATTTTCTCCCAAAGCGATGGAGCACTTGCCTGGACTaGGCACTTGTGGCTAGAAGG +
Preference number: 4 (lower is better)
Translates to: PALQSAVCHINDFLPKRWSTCLD*ALVARR
Trigger: CCTTCTAGCCACAAGTGCCCAGTCCAGGCAAGTGCT...CCATCGCTTTGGGAGAAAATCATTAATATGGCATACTGCAGATTGGAGGGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp GCAGAACTCACCAGTCTAATCCATAAAAATCACGTCGCCCATCGCTCCTTTCCTAAGTCAGCACTTGCCTaGACTGGGCACTTGTGGCTA +
Preference number: 4 (lower is better)
Translates to: AELTSLIHKNHVAHRSFPKSALA*TGHLWL
Trigger: TAGCCACAAGTGCCCAGTCCAGGCAAGTGCTGACTT...AGGAAAGGAGCGATGGGCGACGTGATTTTTATGGATTAGACTGGTGAGTTCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR TCA 90 bp GCAGAACTCACCAGTCTAATCCATAAAAATCACGTCGCCCATCGCTCCTTTCCTTGCACGGCTCCACAGTaGCATACAACACAGTGTGTT +
Preference number: 4 (lower is better)
Translates to: AELTSLIHKNHVAHRSFPCTAPQ*HTTQCV
Trigger: AACACACTGTGTTGTATGTCACTGTGGAGCCGTGCA...AGGAAAGGAGCGATGGGCGACGTGATTTTTATGGATTAGACTGGTGAGTTCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR TCA 90 bp GCTATAAGGCCAGTTCACGTAGGACCACTGGGAAAGACAAGCTTTGGCATCACCAGTTCTTGCCTACACTaGAGCTCTTGGCCATCTATT +
Preference number: 4 (lower is better)
Translates to: AIRPVHVGPLGKTSFGITSSCLH*SSWPSI
Trigger: AATAGATGGCCAAGAGCTTCAGTGTAGGCAAGAACT...GGTGATGCCAAAGCTTGTCTTTCCCAGTGGTCCTACGTGAACTGGCCTTATAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR TCA 90 bp AAAGCATTACATACCACCCATTCTCCACAGTTTGTTGCAAAGACCAGCAAACACGGCTGCAGTGAGCTGTaGTCATGCCACTGGACGACA +
Preference number: 4 (lower is better)
Translates to: KALHTTHSPQFVAKTSKHGCSEL*SCHWTT
Trigger: TGTCGTCCAGTGGCATGATCACAGCTCACTGCAGCC...GTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAATGGGTGGTATGTAATGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR GCA 90 bp GCAGCTAACATTTTCTCGAAGGGCCAGACGCTAAATATTTTAGGCCTTTGTGAGGCTTCTTTGGCCATGTaGATCGCCTCCTCCATCCAC +
Preference number: 4 (lower is better)
Translates to: AANIFSKGQTLNILGLCEASLAM*IASSIH
Trigger: GTGGATGGAGGAGGCGATGCACATGGCCAAAGAAGC...CTCACAAAGGCCTAAAATATTTAGCGTCTGGCCCTTCGAGAAAATGTTAGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237283.9
CDS-3UTR GCA 90 bp GCAGCTAACATTTTCTCGAAGGGCCAGACGCTAAATATTTTAGGCCTTTGTGAGCACCCTCAGTGGTCCTaGCCTCCAATCTGCAGTATG +
Preference number: 4 (lower is better)
Translates to: AANIFSKGQTLNILGLCEHPQWS*PPICSM
Trigger: CATACTGCAGATTGGAGGGCAGGACCACTGAGGGTG...CTCACAAAGGCCTAAAATATTTAGCGTCTGGCCCTTCGAGAAAATGTTAGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp TACTCTAGAGAGGCAAAACTCCAGGTTGGTTGTCCTACAAATAATCCCCAAGAACAGCCCCCAGTGCCCTaGAAGAACATCGTAGCTGCA +
Preference number: 4 (lower is better)
Translates to: YSREAKLQVGCPTNNPQEQPPVP*KNIVAA
Trigger: TGCAGCTACGATGTTCTTCCAGGGCACTGGGGGCTG...TTCTTGGGGATTATTTGTAGGACAACCAACCTGGAGTTTTGCCTCTCTAGAGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp CCTGCCCTCCAATCTGCAGTATGCCATATTAATGATTTTCTCCCAAAGCGATGGGGGGACTTCCTGCTGTaGATACCCTTTCCAGTGTTG +
Preference number: 4 (lower is better)
Translates to: PALQSAVCHINDFLPKRWGDFLL*IPFPVL
Trigger: CAACACTGGAAAGGGTATCCACAGCAGGAAGTCCCC...CCATCGCTTTGGGAGAAAATCATTAATATGGCATACTGCAGATTGGAGGGCAGG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp CCTGCCCTCCAATCTGCAGTATGCCATATTAATGATTTTCTCCCAAAGCGATGGGCTGGATATGGCCCATaGGCCATACTTTGTGGACTC +
Preference number: 4 (lower is better)
Translates to: PALQSAVCHINDFLPKRWAGYGP*AILCGL
Trigger: GAGTCCACAAAGTATGGCCCATGGGCCATATCCAGC...CCATCGCTTTGGGAGAAAATCATTAATATGGCATACTGCAGATTGGAGGGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp TACTCTAGAGAGGCAAAACTCCAGGTTGGTTGTCCTACAAATAATCCCCAAGAAGCAGCGGGCTGGATATaGCCCATGGGCCATACTTTG +
Preference number: 4 (lower is better)
Translates to: YSREAKLQVGCPTNNPQEAAGWI*PMGHTL
Trigger: CAAAGTATGGCCCATGGGCCATATCCAGCCCGCTGC...TTCTTGGGGATTATTTGTAGGACAACCAACCTGGAGTTTTGCCTCTCTAGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR CAA 72 bp AAGCATTTCGGGGTAAAGGGCCATGGTGTGTTGTGTTaGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: KHFGVKGHGVLC*CVCVCVCVCVC
Trigger: ACACACACACACACACACACACACACACACACACAAACACAACACACCATGGCCCTTTACCCCGAAATGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR TCA 90 bp AAAGCATTACATACCACCCATTCTCCACAGTTTGTTGCAAAGACCAGCAAACACAGGTTGAGGCTGCAGTaGGCTGTGATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: KALHTTHSPQFVAKTSKHRLRLQ*AVIMPL
Trigger: CAGTGGCATGATCACAGCTCACTGCAGCCTCAACCT...GTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAATGGGTGGTATGTAATGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR TCA 90 bp AGCATTACATACCACCCATTCTCCACAGTTTGTTGCAAAGACCAGCAAACACTGTTAGGTGTGGTGACATaGGTCTGTGGTCCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: SITYHPFSTVCCKDQQTLLGVVT*VCGPSY
Trigger: GTAGCTGGGACCACAGACTCATGTCACCACACCTAA...CAGTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAATGGGTGGTATGTAATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR GCA 90 bp AGCATTACATACCACCCATTCTCCACAGTTTGTTGCAAAGACCAGCAAACACTGGAACTGGGGACTTCCTaGTGTGGATACCCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: SITYHPFSTVCCKDQQTLELGTS*CGYPFQ
Trigger: CTGGAAAGGGTATCCACAGCAGGAAGTCCCCAGTTC...CAGTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAATGGGTGGTATGTAATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp GCAGCTAACATTTTCTCGAAGGGCCAGACGCTAAATATTTTAGGCCTTTGTGAGAAGTCAGCACTTGCCTaGACTGGGCACTTGTGGCTA +
Preference number: 4 (lower is better)
Translates to: AANIFSKGQTLNILGLCEKSALA*TGHLWL
Trigger: TAGCCACAAGTGCCCAGTCCAGGCAAGTGCTGACTT...CTCACAAAGGCCTAAAATATTTAGCGTCTGGCCCTTCGAGAAAATGTTAGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp GCAGCTAACATTTTCTCGAAGGGCCAGACGCTAAATATTTTAGGCCTTTGTGAGGGGGACTTCCTGCTGTaGATACCCTTTCCAGTGTTG +
Preference number: 4 (lower is better)
Translates to: AANIFSKGQTLNILGLCEGDFLL*IPFPVL
Trigger: CAACACTGGAAAGGGTATCCACAGCAGGAAGTCCCC...CTCACAAAGGCCTAAAATATTTAGCGTCTGGCCCTTCGAGAAAATGTTAGCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp AGCATTACATACCACCCATTCTCCACAGTTTGTTGCAAAGACCAGCAAACACTGGTCATGGAGGTGAACTaGGGACTTCCTGCTGTGGAT +
Preference number: 4 (lower is better)
Translates to: SITYHPFSTVCCKDQQTLVMEVN*GLPAVD
Trigger: ATCCACAGCAGGAAGTCCCCAGTTCACCTCCATGAC...CAGTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAATGGGTGGTATGTAATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp AGCATTACATACCACCCATTCTCCACAGTTTGTTGCAAAGACCAGCAAACACTGGCTGGATATGGCCCATaGGCCATACTTTGTGGACTC +
Preference number: 4 (lower is better)
Translates to: SITYHPFSTVCCKDQQTLAGYGP*AILCGL
Trigger: GAGTCCACAAAGTATGGCCCATGGGCCATATCCAGC...CAGTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAATGGGTGGTATGTAATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp AGCATTACATACCACCCATTCTCCACAGTTTGTTGCAAAGACCAGCAAACACTGCATGGCAGAAGGCAATaGGAGCAGGCATCACATGGT +
Preference number: 4 (lower is better)
Translates to: SITYHPFSTVCCKDQQTLHGRRQ*EQASHG
Trigger: ACCATGTGATGCCTGCTCCCATTGCCTTCTGCCATG...CAGTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAATGGGTGGTATGTAATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606514.5
CDS-3UTR TCA 90 bp CCTGCCCTCCAATCTGCAGTATGCCATATTAATGATTTTCTCCCAAAGCGATGGCCAGATGACCAAAATTaGCATCACCTTGGTGTGACG +
Preference number: 4 (lower is better)
Translates to: PALQSAVCHINDFLPKRWPDDQN*HHLGVT
Trigger: CGTCACACCAAGGTGATGTCAATTTTGGTCATCTGG...CCATCGCTTTGGGAGAAAATCATTAATATGGCATACTGCAGATTGGAGGGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR TCA 90 bp GCTATAAGGCCAGTTCACGTAGGACCACTGGGAAAGACAAGCTTTGGCATCACCTGTCAAACTACACCATaGAGCCTCCTTAATAGTCAT +
Preference number: 4 (lower is better)
Translates to: AIRPVHVGPLGKTSFGITCQTTP*SLLNSH
Trigger: ATGACTATTAAGGAGGCTTCATGGTGTAGTTTGACA...GGTGATGCCAAAGCTTGTCTTTCCCAGTGGTCCTACGTGAACTGGCCTTATAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp GCAGCTAACATTTTCTCGAAGGGCCAGACGCTAAATATTTTAGGCCTTTGTGAGTGGACTGGGCACTTGTaGCTAGAAGGGTATGCACTA +
Preference number: 4 (lower is better)
Translates to: AANIFSKGQTLNILGLCEWTGHL*LEGYAL
Trigger: TAGTGCATACCCTTCTAGCCACAAGTGCCCAGTCCA...CTCACAAAGGCCTAAAATATTTAGCGTCTGGCCCTTCGAGAAAATGTTAGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp CAAAACCAAGCAATTATAAGTCCTCTGAAGCATGTAACTGTGATTAGCTGCTACCACACTCCAGGTCCCTaGGTCTGGCCACACATTCTC +
Preference number: 4 (lower is better)
Translates to: QNQAIISPLKHVTVISCYHTPGP*VWPHIL
Trigger: GAGAATGTGTGGCCAGACCCAGGGACCTGGAGTGTG...GTAGCAGCTAATCACAGTTACATGCTTCAGAGGACTTATAATTGCTTGGTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp TACTCTAGAGAGGCAAAACTCCAGGTTGGTTGTCCTACAAATAATCCCCAAGAATTTCTCCCAAAGCGATaGAGGGAACTGTGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: YSREAKLQVGCPTNNPQEFLPKR*RELCPS
Trigger: ACTGGGGCACAGTTCCCTCCATCGCTTTGGGAGAAA...TTCTTGGGGATTATTTGTAGGACAACCAACCTGGAGTTTTGCCTCTCTAGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp GCAGAACTCACCAGTCTAATCCATAAAAATCACGTCGCCCATCGCTCCTTTCCTTTTCAGCTGGTGTCTTaGACAGGCACTATCAGTATC +
Preference number: 4 (lower is better)
Translates to: AELTSLIHKNHVAHRSFPFQLVS*TGTISI
Trigger: GATACTGATAGTGCCTGTCCAAGACACCAGCTGAAA...AGGAAAGGAGCGATGGGCGACGTGATTTTTATGGATTAGACTGGTGAGTTCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp GCAGCTAACATTTTCTCGAAGGGCCAGACGCTAAATATTTTAGGCCTTTGTGAGAGAGAAACCAATTCCTaGTGTCTGGTTTCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: AANIFSKGQTLNILGLCERETNS*CLVSLG
Trigger: CCCCAGGGAAACCAGACACCAGGAATTGGTTTCTCT...CTCACAAAGGCCTAAAATATTTAGCGTCTGGCCCTTCGAGAAAATGTTAGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR TCA 90 bp AGCATTACATACCACCCATTCTCCACAGTTTGTTGCAAAGACCAGCAAACACTGCCAGATGACCAAAATTaGCATCACCTTGGTGTGACG +
Preference number: 4 (lower is better)
Translates to: SITYHPFSTVCCKDQQTLPDDQN*HHLGVT
Trigger: CGTCACACCAAGGTGATGTCAATTTTGGTCATCTGG...CAGTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAATGGGTGGTATGTAATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR GCA 90 bp GCAGAACTCACCAGTCTAATCCATAAAAATCACGTCGCCCATCGCTCCTTTCCTAGGAAGAGATGGTTGTaGCAAGTAACAAGAAAGCAC +
Preference number: 4 (lower is better)
Translates to: AELTSLIHKNHVAHRSFPRKRWL*QVTRKH
Trigger: GTGCTTTCTTGTTACTTGGCACAACCATCTCTTCCT...AGGAAAGGAGCGATGGGCGACGTGATTTTTATGGATTAGACTGGTGAGTTCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR GCA 90 bp GCAGCTAACATTTTCTCGAAGGGCCAGACGCTAAATATTTTAGGCCTTTGTGAGCCAAGGAAGGAGGATTaGTTCAGCCTAGGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: AANIFSKGQTLNILGLCEPRKED*FSLGVQ
Trigger: TTGAACTCCTAGGCTGAAGCAATCCTCCTTCCTTGG...CTCACAAAGGCCTAAAATATTTAGCGTCTGGCCCTTCGAGAAAATGTTAGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp TACTCTAGAGAGGCAAAACTCCAGGTTGGTTGTCCTACAAATAATCCCCAAGAACCGTGTCTAAGTAGCTaGGGAATGTGGTACTCAGGA +
Preference number: 4 (lower is better)
Translates to: YSREAKLQVGCPTNNPQEPCLSS*GMWYSG
Trigger: TCCTGAGTACCACATTCCCCAGCTACTTAGACACGG...TTCTTGGGGATTATTTGTAGGACAACCAACCTGGAGTTTTGCCTCTCTAGAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp GCAGAACTCACCAGTCTAATCCATAAAAATCACGTCGCCCATCGCTCCTTTCCTCAACACAGGAAGAGATaGTTGTGCCAAGTAACAAGA +
Preference number: 4 (lower is better)
Translates to: AELTSLIHKNHVAHRSFPQHRKR*LCQVTR
Trigger: TCTTGTTACTTGGCACAACCATCTCTTCCTGTGTTG...AGGAAAGGAGCGATGGGCGACGTGATTTTTATGGATTAGACTGGTGAGTTCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp AAAGCATTACATACCACCCATTCTCCACAGTTTGTTGCAAAGACCAGCAAACACGCCAAGGTGGAGGCCTaGTTAAAAAGAGGACTTAGG +
Preference number: 4 (lower is better)
Translates to: KALHTTHSPQFVAKTSKHAKVEA*LKRGLR
Trigger: CCTAAGTCCTCTTTTTAACCAGGCCTCCACCTTGGC...GTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAATGGGTGGTATGTAATGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR CAA 72 bp ACGCTAAATATTTTAGGCCTTTGTGAGTCGCATGGTTaGTCACCACTGCTCAACTCTGCCATTGTAGCACAC +
Preference number: 4 (lower is better)
Translates to: TLNILGLCESHG*SPLLNSAIVAH
Trigger: GTGTGCTACAATGGCAGAGTTGAGCAGTGGTGACAAACCATGCGACTCACAAAGGCCTAAAATATTTAGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR GCA 90 bp GCTATAAGGCCAGTTCACGTAGGACCACTGGGAAAGACAAGCTTTGGCATCACCGTTCCTTTTGCTTTTTaGCATAACTCTTATTGTCCT +
Preference number: 4 (lower is better)
Translates to: AIRPVHVGPLGKTSFGITVPFAF*HNSYCP
Trigger: AGGACAATAAGAGTTATGGCAAAAAGCAAAAGGAAC...GGTGATGCCAAAGCTTGTCTTTCCCAGTGGTCCTACGTGAACTGGCCTTATAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR GCA 90 bp AAAGCATTACATACCACCCATTCTCCACAGTTTGTTGCAAAGACCAGCAAACACCCAAGGAAGGAGGATTaGTTCAGCCTAGGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: KALHTTHSPQFVAKTSKHPRKED*FSLGVQ
Trigger: TTGAACTCCTAGGCTGAAGCAATCCTCCTTCCTTGG...GTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAATGGGTGGTATGTAATGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR GCA 90 bp GCTATAAGGCCAGTTCACGTAGGACCACTGGGAAAGACAAGCTTTGGCATCACCACACTGAAATTTGATTaGCATATAAGGTTCATGGGT +
Preference number: 4 (lower is better)
Translates to: AIRPVHVGPLGKTSFGITTLKFD*HIRFMG
Trigger: ACCCATGAACCTTATATGGCAATCAAATTTCAGTGT...GGTGATGCCAAAGCTTGTCTTTCCCAGTGGTCCTACGTGAACTGGCCTTATAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp CCTGCCCTCCAATCTGCAGTATGCCATATTAATGATTTTCTCCCAAAGCGATGGTTGTCCAGGTCACTTTaGGTCACTTGGTTCTTTCAT +
Preference number: 4 (lower is better)
Translates to: PALQSAVCHINDFLPKRWLSRSL*VTWFFH
Trigger: ATGAAAGAACCAAGTGACCCAAAGTGACCTGGACAA...CCATCGCTTTGGGAGAAAATCATTAATATGGCATACTGCAGATTGGAGGGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp AAAGCATTACATACCACCCATTCTCCACAGTTTGTTGCAAAGACCAGCAAACACAAGGTGTTCTCAGGGTaGCAAACTGCAGTCCAAACA +
Preference number: 4 (lower is better)
Translates to: KALHTTHSPQFVAKTSKHKVFSG*QTAVQT
Trigger: TGTTTGGACTGCAGTTTGCCACCCTGAGAACACCTT...GTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAATGGGTGGTATGTAATGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp AAAGCATTACATACCACCCATTCTCCACAGTTTGTTGCAAAGACCAGCAAACACGCCAGACTTACTGGGTaGTACTCTAGAGAGGCAAAA +
Preference number: 4 (lower is better)
Translates to: KALHTTHSPQFVAKTSKHARLTG*YSREAK
Trigger: TTTTGCCTCTCTAGAGTACCACCCAGTAAGTCTGGC...GTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAATGGGTGGTATGTAATGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR TCA 90 bp CAGTATCAGAAACATCTTAGGTCTATTTTCCAAAACCCTATCTTATCAGGCATAGGACTCTTGCCACTTTaGCGACACCAATCGAGGACC +
Preference number: 4 (lower is better)
Translates to: QYQKHLRSIFQNPILSGIGLLPL*RHQSRT
Trigger: GGTCCTCGATTGGTGTCGTCAAAGTGGCAAGAGTCC...TATGCCTGATAAGATAGGGTTTTGGAAAATAGACCTAAGATGTTTCTGATACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR TCA 90 bp CAGTATCAGAAACATCTTAGGTCTATTTTCCAAAACCCTATCTTATCAGGCATACTGAAGAAATGCAACTaGGGAGCAGCAGCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: QYQKHLRSIFQNPILSGILKKCN*GAAAPP
Trigger: TGGAGGGGCTGCTGCTCCTCAGTTGCATTTCTTCAG...TATGCCTGATAAGATAGGGTTTTGGAAAATAGACCTAAGATGTTTCTGATACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR TCA 90 bp CAAAACCAAGCAATTATAAGTCCTCTGAAGCATGTAACTGTGATTAGCTGCTACGACTTAGGGCCTGACTaGAGTTTGGTCAAGGAGAGA +
Preference number: 4 (lower is better)
Translates to: QNQAIISPLKHVTVISCYDLGPD*SLVKER
Trigger: TCTCTCCTTGACCAAACTTCAGTCAGGCCCTAAGTC...GTAGCAGCTAATCACAGTTACATGCTTCAGAGGACTTATAATTGCTTGGTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR GCA 90 bp CAGTATCAGAAACATCTTAGGTCTATTTTCCAAAACCCTATCTTATCAGGCATACACCCTCAGTGGTCCTaGCCTCCAATCTGCAGTATG +
Preference number: 4 (lower is better)
Translates to: QYQKHLRSIFQNPILSGIHPQWS*PPICSM
Trigger: CATACTGCAGATTGGAGGGCAGGACCACTGAGGGTG...TATGCCTGATAAGATAGGGTTTTGGAAAATAGACCTAAGATGTTTCTGATACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR GCA 90 bp AAAGCATTACATACCACCCATTCTCCACAGTTTGTTGCAAAGACCAGCAAACACCCTCTTCCCACAGACTaGTTATTCATTGCAACAGAG +
Preference number: 4 (lower is better)
Translates to: KALHTTHSPQFVAKTSKHPLPTD*LFIATE
Trigger: CTCTGTTGCAATGAATAAGCAGTCTGTGGGAAGAGG...GTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAATGGGTGGTATGTAATGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR GCA 90 bp CCTGCCCTCCAATCTGCAGTATGCCATATTAATGATTTTCTCCCAAAGCGATGGAAAAACAACATCAAATaGTGGCAAGGCTGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: PALQSAVCHINDFLPKRWKNNIK*WQGCGE
Trigger: TTCTCCACAGCCTTGCCAGCATTTGATGTTGTTTTT...CCATCGCTTTGGGAGAAAATCATTAATATGGCATACTGCAGATTGGAGGGCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606514.5
CDS-3UTR CCA 90 bp GCAGAACTCACCAGTCTAATCCATAAAAATCACGTCGCCCATCGCTCCTTTCCTCCGAACTTTCGATTTTaGTGCATTTGGATTTTCTTG +
Preference number: 4 (lower is better)
Translates to: AELTSLIHKNHVAHRSFPPNFRF*CIWIFL
Trigger: CAAGAAAATCCAAATGCACCAAAATCGAAAGTTCGG...AGGAAAGGAGCGATGGGCGACGTGATTTTTATGGATTAGACTGGTGAGTTCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp AAAGCATTACATACCACCCATTCTCCACAGTTTGTTGCAAAGACCAGCAAACACAACAAGTCTTTCAGCTaGTGTCTTGGACAGGCACTA +
Preference number: 4 (lower is better)
Translates to: KALHTTHSPQFVAKTSKHNKSFS*CLGQAL
Trigger: TAGTGCCTGTCCAAGACACCAGCTGAAAGACTTGTT...GTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAATGGGTGGTATGTAATGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp GCAGCTAACATTTTCTCGAAGGGCCAGACGCTAAATATTTTAGGCCTTTGTGAGATGCTGGCAAGGCTGTaGAGAAGTGATATTACTCAT +
Preference number: 4 (lower is better)
Translates to: AANIFSKGQTLNILGLCEMLARL*RSDITH
Trigger: ATGAGTAATATCACTTCTCCACAGCCTTGCCAGCAT...CTCACAAAGGCCTAAAATATTTAGCGTCTGGCCCTTCGAGAAAATGTTAGCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606514.5
CDS-3UTR TCA 90 bp TACTCTAGAGAGGCAAAACTCCAGGTTGGTTGTCCTACAAATAATCCCCAAGAAACAGCTTTCAGTCTATaGATCTTGTCCAGGTCACTT +
Preference number: 4 (lower is better)
Translates to: YSREAKLQVGCPTNNPQETAFSL*ILSRSL
Trigger: AAGTGACCTGGACAAGATTCATAGACTGAAAGCTGT...TTCTTGGGGATTATTTGTAGGACAACCAACCTGGAGTTTTGCCTCTCTAGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR TCA 90 bp TACTCTAGAGAGGCAAAACTCCAGGTTGGTTGTCCTACAAATAATCCCCAAGAATGGTACTCAGGAAGCTaGATGACCTCAACATATATC +
Preference number: 4 (lower is better)
Translates to: YSREAKLQVGCPTNNPQEWYSGS*MTSTYI
Trigger: GATATATGTTGAGGTCATTCAGCTTCCTGAGTACCA...TTCTTGGGGATTATTTGTAGGACAACCAACCTGGAGTTTTGCCTCTCTAGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR GCA 90 bp GCAGAACTCACCAGTCTAATCCATAAAAATCACGTCGCCCATCGCTCCTTTCCTAAATGCAATGAAATCTaGTTGCAGGAAAGCATAAGA +
Preference number: 4 (lower is better)
Translates to: AELTSLIHKNHVAHRSFPKCNEI*LQESIR
Trigger: TCTTATGCTTTCCTGCAAGCAGATTTCATTGCATTT...AGGAAAGGAGCGATGGGCGACGTGATTTTTATGGATTAGACTGGTGAGTTCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR GCA 90 bp AAAGCATTACATACCACCCATTCTCCACAGTTTGTTGCAAAGACCAGCAAACACTTCTCCACAGTTTGTTaGAAAGACCAGCAAACACTG +
Preference number: 4 (lower is better)
Translates to: KALHTTHSPQFVAKTSKHFSTVC*KDQQTL
Trigger: CAGTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAA...GTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAATGGGTGGTATGTAATGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp TACTCTAGAGAGGCAAAACTCCAGGTTGGTTGTCCTACAAATAATCCCCAAGAATTGTCCAGGTCACTTTaGGTCACTTGGTTCTTTCAT +
Preference number: 4 (lower is better)
Translates to: YSREAKLQVGCPTNNPQELSRSL*VTWFFH
Trigger: ATGAAAGAACCAAGTGACCCAAAGTGACCTGGACAA...TTCTTGGGGATTATTTGTAGGACAACCAACCTGGAGTTTTGCCTCTCTAGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp AAAGCATTACATACCACCCATTCTCCACAGTTTGTTGCAAAGACCAGCAAACACCAACACAGGAAGAGATaGTTGTGCCAAGTAACAAGA +
Preference number: 4 (lower is better)
Translates to: KALHTTHSPQFVAKTSKHQHRKR*LCQVTR
Trigger: TCTTGTTACTTGGCACAACCATCTCTTCCTGTGTTG...GTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAATGGGTGGTATGTAATGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp AGCATTACATACCACCCATTCTCCACAGTTTGTTGCAAAGACCAGCAAACACTGTACAACCAGAACATGTaGGGGTTTATAACTAATGGG +
Preference number: 4 (lower is better)
Translates to: SITYHPFSTVCCKDQQTLYNQNM*GFITNG
Trigger: CCCATTAGTTATAAACCCCCACATGTTCTGGTTGTA...CAGTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAATGGGTGGTATGTAATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp AAAGCATTACATACCACCCATTCTCCACAGTTTGTTGCAAAGACCAGCAAACACCAACACAGAAACAAATaGGCATGGCTGTCATCCAAT +
Preference number: 4 (lower is better)
Translates to: KALHTTHSPQFVAKTSKHQHRNK*AWLSSN
Trigger: ATTGGATGACAGCCATGCCCATTTGTTTCTGTGTTG...GTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAATGGGTGGTATGTAATGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR TCA 90 bp GCAGCTAACATTTTCTCGAAGGGCCAGACGCTAAATATTTTAGGCCTTTGTGAGTCTTTTATCAGTGATTaGAGCCTACCAAAGCATTAC +
Preference number: 4 (lower is better)
Translates to: AANIFSKGQTLNILGLCESFISD*SLPKHY
Trigger: GTAATGCTTTGGTAGGCTTCAATCACTGATAAAAGA...CTCACAAAGGCCTAAAATATTTAGCGTCTGGCCCTTCGAGAAAATGTTAGCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR GCA 90 bp CCTGCCCTCCAATCTGCAGTATGCCATATTAATGATTTTCTCCCAAAGCGATGGGTTCCTTTTGCTTTTTaGCATAACTCTTATTGTCCT +
Preference number: 4 (lower is better)
Translates to: PALQSAVCHINDFLPKRWVPFAF*HNSYCP
Trigger: AGGACAATAAGAGTTATGGCAAAAAGCAAAAGGAAC...CCATCGCTTTGGGAGAAAATCATTAATATGGCATACTGCAGATTGGAGGGCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR GCA 90 bp CAAAACCAAGCAATTATAAGTCCTCTGAAGCATGTAACTGTGATTAGCTGCTACCCTCTTCCCACAGACTaGTTATTCATTGCAACAGAG +
Preference number: 4 (lower is better)
Translates to: QNQAIISPLKHVTVISCYPLPTD*LFIATE
Trigger: CTCTGTTGCAATGAATAAGCAGTCTGTGGGAAGAGG...GTAGCAGCTAATCACAGTTACATGCTTCAGAGGACTTATAATTGCTTGGTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR GCA 90 bp AAAGCATTACATACCACCCATTCTCCACAGTTTGTTGCAAAGACCAGCAAACACTACTTTGTGGACTCCTaGTCTAGATTCTCAAGTTCA +
Preference number: 4 (lower is better)
Translates to: KALHTTHSPQFVAKTSKHYFVDS*SRFSSS
Trigger: TGAACTTGAGAATCTAGAGCAGGAGTCCACAAAGTA...GTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAATGGGTGGTATGTAATGCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp CCTGCCCTCCAATCTGCAGTATGCCATATTAATGATTTTCTCCCAAAGCGATGGTACTATTTTCGGCTTTaGCTTTTTGTCCTAGATAGT +
Preference number: 4 (lower is better)
Translates to: PALQSAVCHINDFLPKRWYYFRL*LFVLDS
Trigger: ACTATCTAGGACAAAAAGCCAAAGCCGAAAATAGTA...CCATCGCTTTGGGAGAAAATCATTAATATGGCATACTGCAGATTGGAGGGCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp AAAGCATTACATACCACCCATTCTCCACAGTTTGTTGCAAAGACCAGCAAACACTTCCTCACTGTCACTTaGAAATTGCTAGCAGAATTC +
Preference number: 4 (lower is better)
Translates to: KALHTTHSPQFVAKTSKHFLTVT*KLLAEF
Trigger: GAATTCTGCTAGCAATTTCCAAGTGACAGTGAGGAA...GTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAATGGGTGGTATGTAATGCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp CAAAACCAAGCAATTATAAGTCCTCTGAAGCATGTAACTGTGATTAGCTGCTACTTTCAGCTGGTGTCTTaGACAGGCACTATCAGTATC +
Preference number: 4 (lower is better)
Translates to: QNQAIISPLKHVTVISCYFQLVS*TGTISI
Trigger: GATACTGATAGTGCCTGTCCAAGACACCAGCTGAAA...GTAGCAGCTAATCACAGTTACATGCTTCAGAGGACTTATAATTGCTTGGTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp CAAAACCAAGCAATTATAAGTCCTCTGAAGCATGTAACTGTGATTAGCTGCTACAACAAGTCTTTCAGCTaGTGTCTTGGACAGGCACTA +
Preference number: 4 (lower is better)
Translates to: QNQAIISPLKHVTVISCYNKSFS*CLGQAL
Trigger: TAGTGCCTGTCCAAGACACCAGCTGAAAGACTTGTT...GTAGCAGCTAATCACAGTTACATGCTTCAGAGGACTTATAATTGCTTGGTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp AAAGCATTACATACCACCCATTCTCCACAGTTTGTTGCAAAGACCAGCAAACACGGGAAAGACAAGCTTTaGCATCACCACAGATTTTTA +
Preference number: 4 (lower is better)
Translates to: KALHTTHSPQFVAKTSKHGKDKL*HHHRFL
Trigger: TAAAAATCTGTGGTGATGCCAAAGCTTGTCTTTCCC...GTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAATGGGTGGTATGTAATGCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp TACTCTAGAGAGGCAAAACTCCAGGTTGGTTGTCCTACAAATAATCCCCAAGAAGGGAAAGACAAGCTTTaGCATCACCACAGATTTTTA +
Preference number: 4 (lower is better)
Translates to: YSREAKLQVGCPTNNPQEGKDKL*HHHRFL
Trigger: TAAAAATCTGTGGTGATGCCAAAGCTTGTCTTTCCC...TTCTTGGGGATTATTTGTAGGACAACCAACCTGGAGTTTTGCCTCTCTAGAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp GCAGCTAACATTTTCTCGAAGGGCCAGACGCTAAATATTTTAGGCCTTTGTGAGATAGTCATGGATATGTaGTGTTCAACCCAATATCCA +
Preference number: 4 (lower is better)
Translates to: AANIFSKGQTLNILGLCEIVMDM*CSTQYP
Trigger: TGGATATTGGGTTGAACACCACATATCCATGACTAT...CTCACAAAGGCCTAAAATATTTAGCGTCTGGCCCTTCGAGAAAATGTTAGCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp CAGTATCAGAAACATCTTAGGTCTATTTTCCAAAACCCTATCTTATCAGGCATAGCCAAGGTGGAGGCCTaGTTAAAAAGAGGACTTAGG +
Preference number: 4 (lower is better)
Translates to: QYQKHLRSIFQNPILSGIAKVEA*LKRGLR
Trigger: CCTAAGTCCTCTTTTTAACCAGGCCTCCACCTTGGC...TATGCCTGATAAGATAGGGTTTTGGAAAATAGACCTAAGATGTTTCTGATACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp TACTCTAGAGAGGCAAAACTCCAGGTTGGTTGTCCTACAAATAATCCCCAAGAAACTGTACAAGAAGTATaGTATCAGCATCTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: YSREAKLQVGCPTNNPQETVQEV*YQHLLP
Trigger: TGGAAGCAGATGCTGATACCATACTTCTTGTACAGT...TTCTTGGGGATTATTTGTAGGACAACCAACCTGGAGTTTTGCCTCTCTAGAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606514.5
CDS-3UTR TCA 90 bp TACTCTAGAGAGGCAAAACTCCAGGTTGGTTGTCCTACAAATAATCCCCAAGAACATGTTCAAGATTTCTaGCATTCCTTTTTCCGAACT +
Preference number: 4 (lower is better)
Translates to: YSREAKLQVGCPTNNPQEHVQDF*HSFFRT
Trigger: AGTTCGGAAAAAGGAATGTCAGAAATCTTGAACATG...TTCTTGGGGATTATTTGTAGGACAACCAACCTGGAGTTTTGCCTCTCTAGAGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR TCA 90 bp CAAAACCAAGCAATTATAAGTCCTCTGAAGCATGTAACTGTGATTAGCTGCTACGAGACATCGCTCAAATaGCAGAACCAACAAATACAG +
Preference number: 4 (lower is better)
Translates to: QNQAIISPLKHVTVISCYETSLK*QNQQIQ
Trigger: CTGTATTTGTTGGTTCTGTCATTTGAGCGATGTCTC...GTAGCAGCTAATCACAGTTACATGCTTCAGAGGACTTATAATTGCTTGGTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR TCA 90 bp AAAGCATTACATACCACCCATTCTCCACAGTTTGTTGCAAAGACCAGCAAACACATGATCTTTTATCAGTaGTTGAAGCCTACCAAAGCA +
Preference number: 4 (lower is better)
Translates to: KALHTTHSPQFVAKTSKHMIFYQ*LKPTKA
Trigger: TGCTTTGGTAGGCTTCAATCACTGATAAAAGATCAT...GTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAATGGGTGGTATGTAATGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR GCA 90 bp CAGTATCAGAAACATCTTAGGTCTATTTTCCAAAACCCTATCTTATCAGGCATACTTCAGAGGGACTCTTaGCACTTTGACGACACCAAT +
Preference number: 4 (lower is better)
Translates to: QYQKHLRSIFQNPILSGILQRDS*HFDDTN
Trigger: ATTGGTGTCGTCAAAGTGGCAAGAGTCCCTCTGAAG...TATGCCTGATAAGATAGGGTTTTGGAAAATAGACCTAAGATGTTTCTGATACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR GCA 90 bp GCAGCTAACATTTTCTCGAAGGGCCAGACGCTAAATATTTTAGGCCTTTGTGAGACACTGAAATTTGATTaGCATATAAGGTTCATGGGT +
Preference number: 4 (lower is better)
Translates to: AANIFSKGQTLNILGLCETLKFD*HIRFMG
Trigger: ACCCATGAACCTTATATGGCAATCAAATTTCAGTGT...CTCACAAAGGCCTAAAATATTTAGCGTCTGGCCCTTCGAGAAAATGTTAGCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp AAAGCATTACATACCACCCATTCTCCACAGTTTGTTGCAAAGACCAGCAAACACATAGTCATGGATATGTaGTGTTCAACCCAATATCCA +
Preference number: 4 (lower is better)
Translates to: KALHTTHSPQFVAKTSKHIVMDM*CSTQYP
Trigger: TGGATATTGGGTTGAACACCACATATCCATGACTAT...GTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAATGGGTGGTATGTAATGCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR TCA 90 bp CAGTATCAGAAACATCTTAGGTCTATTTTCCAAAACCCTATCTTATCAGGCATAAGTTCTTGCCTACACTaGAGCTCTTGGCCATCTATT +
Preference number: 4 (lower is better)
Translates to: QYQKHLRSIFQNPILSGISSCLH*SSWPSI
Trigger: AATAGATGGCCAAGAGCTTCAGTGTAGGCAAGAACT...TATGCCTGATAAGATAGGGTTTTGGAAAATAGACCTAAGATGTTTCTGATACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp CAAAACCAAGCAATTATAAGTCCTCTGAAGCATGTAACTGTGATTAGCTGCTACTCCCCCATCTTAAAATaGGAATCAGCTTCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: QNQAIISPLKHVTVISCYSPILK*ESASGK
Trigger: TTTTCCAGAAGCTGATTCCCATTTTAAGATGGGGGA...GTAGCAGCTAATCACAGTTACATGCTTCAGAGGACTTATAATTGCTTGGTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp CAAAACCAAGCAATTATAAGTCCTCTGAAGCATGTAACTGTGATTAGCTGCTACTTCCTCACTGTCACTTaGAAATTGCTAGCAGAATTC +
Preference number: 4 (lower is better)
Translates to: QNQAIISPLKHVTVISCYFLTVT*KLLAEF
Trigger: GAATTCTGCTAGCAATTTCCAAGTGACAGTGAGGAA...GTAGCAGCTAATCACAGTTACATGCTTCAGAGGACTTATAATTGCTTGGTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR TCA 90 bp CAGTATCAGAAACATCTTAGGTCTATTTTCCAAAACCCTATCTTATCAGGCATAACAGCTTTCAGTCTATaGATCTTGTCCAGGTCACTT +
Preference number: 4 (lower is better)
Translates to: QYQKHLRSIFQNPILSGITAFSL*ILSRSL
Trigger: AAGTGACCTGGACAAGATTCATAGACTGAAAGCTGT...TATGCCTGATAAGATAGGGTTTTGGAAAATAGACCTAAGATGTTTCTGATACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR TCA 90 bp CAAAACCAAGCAATTATAAGTCCTCTGAAGCATGTAACTGTGATTAGCTGCTACATAAGAAGCCAGAAATaGATTACGACCAACTGCAAA +
Preference number: 4 (lower is better)
Translates to: QNQAIISPLKHVTVISCYIRSQK*ITTNCK
Trigger: TTTGCAGTTGGTCGTAATTCATTTCTGGCTTCTTAT...GTAGCAGCTAATCACAGTTACATGCTTCAGAGGACTTATAATTGCTTGGTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp CAGTATCAGAAACATCTTAGGTCTATTTTCCAAAACCCTATCTTATCAGGCATAGAGTGTTTATCCCATTaGATCACCATAGGTCATCTG +
Preference number: 4 (lower is better)
Translates to: QYQKHLRSIFQNPILSGIECLSH*ITIGHL
Trigger: CAGATGACCTATGGTGATCCAATGGGATAAACACTC...TATGCCTGATAAGATAGGGTTTTGGAAAATAGACCTAAGATGTTTCTGATACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp CAGTATCAGAAACATCTTAGGTCTATTTTCCAAAACCCTATCTTATCAGGCATACAACACAGAAACAAATaGGCATGGCTGTCATCCAAT +
Preference number: 4 (lower is better)
Translates to: QYQKHLRSIFQNPILSGIQHRNK*AWLSSN
Trigger: ATTGGATGACAGCCATGCCCATTTGTTTCTGTGTTG...TATGCCTGATAAGATAGGGTTTTGGAAAATAGACCTAAGATGTTTCTGATACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR CAA 72 bp TATTTTGTACACAAAACAAGTCTTTCAGCTGGTGTCTaGGACAGGCACTATCAGTATCAATCAATGGAATTC +
Preference number: 4 (lower is better)
Translates to: YFVHKTSLSAGV*DRHYQYQSMEF
Trigger: GAATTCCATTGATTGATACTGATAGTGCCTGTCCAAGACACCAGCTGAAAGACTTGTTTTGTGTACAAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR GCA 90 bp CAAAACCAAGCAATTATAAGTCCTCTGAAGCATGTAACTGTGATTAGCTGCTACAAATGCAATGAAATCTaGTTGCAGGAAAGCATAAGA +
Preference number: 4 (lower is better)
Translates to: QNQAIISPLKHVTVISCYKCNEI*LQESIR
Trigger: TCTTATGCTTTCCTGCAAGCAGATTTCATTGCATTT...GTAGCAGCTAATCACAGTTACATGCTTCAGAGGACTTATAATTGCTTGGTTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR GCA 90 bp CAGTATCAGAAACATCTTAGGTCTATTTTCCAAAACCCTATCTTATCAGGCATATACTTTGTGGACTCCTaGTCTAGATTCTCAAGTTCA +
Preference number: 4 (lower is better)
Translates to: QYQKHLRSIFQNPILSGIYFVDS*SRFSSS
Trigger: TGAACTTGAGAATCTAGAGCAGGAGTCCACAAAGTA...TATGCCTGATAAGATAGGGTTTTGGAAAATAGACCTAAGATGTTTCTGATACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp CAGTATCAGAAACATCTTAGGTCTATTTTCCAAAACCCTATCTTATCAGGCATATACAACCAGAACATGTaGGGGTTTATAACTAATGGG +
Preference number: 4 (lower is better)
Translates to: QYQKHLRSIFQNPILSGIYNQNM*GFITNG
Trigger: CCCATTAGTTATAAACCCCCACATGTTCTGGTTGTA...TATGCCTGATAAGATAGGGTTTTGGAAAATAGACCTAAGATGTTTCTGATACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR TCA 90 bp CAGTATCAGAAACATCTTAGGTCTATTTTCCAAAACCCTATCTTATCAGGCATACATGTTCAAGATTTCTaGCATTCCTTTTTCCGAACT +
Preference number: 4 (lower is better)
Translates to: QYQKHLRSIFQNPILSGIHVQDF*HSFFRT
Trigger: AGTTCGGAAAAAGGAATGTCAGAAATCTTGAACATG...TATGCCTGATAAGATAGGGTTTTGGAAAATAGACCTAAGATGTTTCTGATACTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
3UTR CAA 72 bp ATCGCTCAAATGACAGAACCAACAAATACAGATGCTTaGCATCAAGGAAATGAATCTACTGAAGAAATGCAA +
Preference number: 4 (lower is better)
Translates to: IAQMTEPTNTDA*HQGNESTEEMQ
Trigger: TTGCATTTCTTCAGTAGATTCATTTCCTTGATGCAAAGCATCTGTATTTGTTGGTTCTGTCATTTGAGCGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CCA 90 bp CAGTATCAGAAACATCTTAGGTCTATTTTCCAAAACCCTATCTTATCAGGCATATACTATTTTCGGCTTTaGCTTTTTGTCCTAGATAGT +
Preference number: 4 (lower is better)
Translates to: QYQKHLRSIFQNPILSGIYYFRL*LFVLDS
Trigger: ACTATCTAGGACAAAAAGCCAAAGCCGAAAATAGTA...TATGCCTGATAAGATAGGGTTTTGGAAAATAGACCTAAGATGTTTCTGATACTG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS GCA 90 bp CTCCTCTGCCGACACCGAGCACGCGCCGCTTGCAGCTGGCTTGGGTaGCGCCTTCGCCTCCATACCCAGCCACCACTCAGCTACAGAGCC +
Preference number: 5 (lower is better)
Translates to: LLCRHRARAACSWLG*RLRLHTQPPLSYRA
Trigger: GGCTCTGTAGCTGAGTGGTGGCTGGGTATGGAGGCGAAGGCGGCACCCAAGCCAGCTGCAAGCGGCGCGTGCTCGGTGTCGGCAGAGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237283.9
CDS CCA 90 bp CGGTCTCCTCTGCCGACACCGAGCACGCGCCGCTTGCAGCTGGCTTaGGTGCCGCCTTCGCCTCCATACCCAGCCACCACTCAGCTACAG +
Preference number: 5 (lower is better)
Translates to: RSPLPTPSTRRLQLA*VPPSPPYPATTQLQ
Trigger: CTGTAGCTGAGTGGTGGCTGGGTATGGAGGCGAAGGCGGCACCCAAGCCAGCTGCAAGCGGCGCGTGCTCGGTGTCGGCAGAGGAGACCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237283.9
CDS CCA 90 bp CTTTTCGGTCTCCTCTGCCGACACCGAGCACGCGCCGCTTGCAGCTaGCTTGGGTGCCGCCTTCGCCTCCATACCCAGCCACCACTCAGC +
Preference number: 5 (lower is better)
Translates to: LFGLLCRHRARAACS*LGCRLRLHTQPPLS
Trigger: GCTGAGTGGTGGCTGGGTATGGAGGCGAAGGCGGCACCCAAGCCAGCTGCAAGCGGCGCGTGCTCGGTGTCGGCAGAGGAGACCGAAAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237283.9
CDS GCA 90 bp CATCCACTTTTCGGTCTCCTCTGCCGACACCGAGCACGCGCCGCTTaGAGCTGGCTTGGGTGCCGCCTTCGCCTCCATACCCAGCCACCA +
Preference number: 5 (lower is better)
Translates to: HPLFGLLCRHRARAA*SWLGCRLRLHTQPP
Trigger: TGGTGGCTGGGTATGGAGGCGAAGGCGGCACCCAAGCCAGCTGCAAGCGGCGCGTGCTCGGTGTCGGCAGAGGAGACCGAAAAGTGGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000367593.1
CDS GCA 90 bp TTTGGCCATGTGCATCGCCTCCTCCATCCACTTTTCGGTCTCCTCTaGCGACACCGAGCACGCGCCGCTTGCAGCTGGCTTGGGTGCCGC +
Preference number: 5 (lower is better)
Translates to: FGHVHRLLHPLFGLL*RHRARAACSWLGCR
Trigger: GCGGCACCCAAGCCAGCTGCAAGCGGCGCGTGCTCGGTGTCGGCAGAGGAGACCGAAAAGTGGATGGAGGAGGCGATGCACATGGCCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237283.9
CDS-3UTR CAA 90 bp GTGCAAAGCTGCCCTGTAGTCATGGAGGTGAACTGGGGACTTCCTGCTGTGGATCCGAGCACGCGCCGCTaGCAGCTGGCTTGGGTGCCG +
Preference number: 5 (lower is better)
Translates to: VQSCPVVMEVNWGLPAVDPSTRR*QLAWVP
Trigger: CGGCACCCAAGCCAGCTGCAAGCGGCGCGTGCTCGG...ATCCACAGCAGGAAGTCCCCAGTTCACCTCCATGACTACAGGGCAGCTTTGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237283.9
CDS GCA 90 bp TATTTCCATGTGCATCGCCTCCTCCATCCACTTTTCGGTCTCCTCTaGCGACACCGAGCACGCGCCGCTTGCAGCTGGCTTGGGTGCCGC +
Preference number: 5 (lower is better)
Translates to: YFHVHRLLHPLFGLL*RHRARAACSWLGCR
Trigger: GCGGCACCCAAGCCAGCTGCAAGCGGCGCGTGCTCGGTGTCGGCAGAGGAGACCGAAAAGTGGATGGAGGAGGCGATGCACATGGAAATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367593.1
CDS-3UTR CAA 90 bp GCAGAACTCACCAGTCTAATCCATAAAAATCACGTCGCCCATCGCTCCTTTCCTCCGCTTGCAGCTGGCTaGGGTGCCGCCTTCGCCTCC +
Preference number: 5 (lower is better)
Translates to: AELTSLIHKNHVAHRSFPPLAAG*GAAFAS
Trigger: GGAGGCGAAGGCGGCACCCAAGCCAGCTGCAAGCGG...AGGAAAGGAGCGATGGGCGACGTGATTTTTATGGATTAGACTGGTGAGTTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000237283.9
CDS-3UTR CAA 90 bp CTAAAGCTGGGCTGTATAGGCCCATCAAGAATGGGGGCCAAGGTGGAGGCCTGGGCCAAGGAAGGAGGATaGCTTCAGCCTAGGAGTTCA +
Preference number: 5 (lower is better)
Translates to: LKLGCIGPSRMGAKVEAWAKEGG*LQPRSS
Trigger: TGAACTCCTAGGCTGAAGCAATCCTCCTTCCTTGGC...CCAGGCCTCCACCTTGGCCCCCATTCTTGATGGGCCTATACAGCCCAGCTTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CAA 90 bp CTAAAGCTGGGCTGTATAGGCCCATCAAGAATGGGGGCCAAGGTGGAGGCCTGGCTTGTCCAGGTCACTTaGGGTCACTTGGTTCTTTCA +
Preference number: 5 (lower is better)
Translates to: LKLGCIGPSRMGAKVEAWLVQVT*GHLVLS
Trigger: TGAAAGAACCAAGTGACCCAAAGTGACCTGGACAAG...CCAGGCCTCCACCTTGGCCCCCATTCTTGATGGGCCTATACAGCCCAGCTTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CAA 90 bp GTGCAAAGCTGCCCTGTAGTCATGGAGGTGAACTGGGGACTTCCTGCTGTGGATCTAAGAAGTCAGCACTaGCCTGGACTGGGCACTTGT +
Preference number: 5 (lower is better)
Translates to: VQSCPVVMEVNWGLPAVDLRSQH*PGLGTC
Trigger: ACAAGTGCCCAGTCCAGGCAAGTGCTGACTTCTTAG...ATCCACAGCAGGAAGTCCCCAGTTCACCTCCATGACTACAGGGCAGCTTTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CAA 90 bp CTAAAGCTGGGCTGTATAGGCCCATCAAGAATGGGGGCCAAGGTGGAGGCCTGGCTTTACAGGACATTATaGGGTCAGCTGACAAAACTG +
Preference number: 5 (lower is better)
Translates to: LKLGCIGPSRMGAKVEAWLYRTL*GQLTKL
Trigger: CAGTTTTGTCAGCTGACCCAATAATGTCCTGTAAAG...CCAGGCCTCCACCTTGGCCCCCATTCTTGATGGGCCTATACAGCCCAGCTTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CAA 90 bp GTGCAAAGCTGCCCTGTAGTCATGGAGGTGAACTGGGGACTTCCTGCTGTGGATTTTTCGAGGGCTTCTTaGGCAGTTCTCCAGACTGTA +
Preference number: 5 (lower is better)
Translates to: VQSCPVVMEVNWGLPAVDFSRAS*AVLQTV
Trigger: TACAGTCTGGAGAACTGCCAAAGAAGCCCTCGAAAA...ATCCACAGCAGGAAGTCCCCAGTTCACCTCCATGACTACAGGGCAGCTTTGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606514.5
CDS-3UTR CAA 90 bp CCTGCCCTCCAATCTGCAGTATGCCATATTAATGATTTTCTCCCAAAGCGATGGGCCTGGACTGGGCACTaGTGGCTAGAAGGGTATGCA +
Preference number: 5 (lower is better)
Translates to: PALQSAVCHINDFLPKRWAWTGH*WLEGYA
Trigger: TGCATACCCTTCTAGCCACAAGTGCCCAGTCCAGGC...CCATCGCTTTGGGAGAAAATCATTAATATGGCATACTGCAGATTGGAGGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CAA 90 bp CTAAAGCTGGGCTGTATAGGCCCATCAAGAATGGGGGCCAAGGTGGAGGCCTGGATTCCTCACTGTCACTaGGAAATTGCTAGCAGAATT +
Preference number: 5 (lower is better)
Translates to: LKLGCIGPSRMGAKVEAWIPHCH*EIASRI
Trigger: AATTCTGCTAGCAATTTCCAAGTGACAGTGAGGAAT...CCAGGCCTCCACCTTGGCCCCCATTCTTGATGGGCCTATACAGCCCAGCTTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CAA 90 bp GTGCAAAGCTGCCCTGTAGTCATGGAGGTGAACTGGGGACTTCCTGCTGTGGATTGCAATGAAATCTGCTaGCAGGAAAGCATAAGAAGC +
Preference number: 5 (lower is better)
Translates to: VQSCPVVMEVNWGLPAVDCNEIC*QESIRS
Trigger: GCTTCTTATGCTTTCCTGCAAGCAGATTTCATTGCA...ATCCACAGCAGGAAGTCCCCAGTTCACCTCCATGACTACAGGGCAGCTTTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CAA 90 bp CCTGCCCTCCAATCTGCAGTATGCCATATTAATGATTTTCTCCCAAAGCGATGGAGGAGGAAGGATTGCTaGAGCCAGGTTGAGGCTGCA +
Preference number: 5 (lower is better)
Translates to: PALQSAVCHINDFLPKRWRRKDC*SQVEAA
Trigger: TGCAGCCTCAACCTGGCTCAAGCAATCCTTCCTCCT...CCATCGCTTTGGGAGAAAATCATTAATATGGCATACTGCAGATTGGAGGGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CAA 90 bp GCAGAACTCACCAGTCTAATCCATAAAAATCACGTCGCCCATCGCTCCTTTCCTGCCAAGGAAGGAGGATaGCTTCAGCCTAGGAGTTCA +
Preference number: 5 (lower is better)
Translates to: AELTSLIHKNHVAHRSFPAKEGG*LQPRSS
Trigger: TGAACTCCTAGGCTGAAGCAATCCTCCTTCCTTGGC...AGGAAAGGAGCGATGGGCGACGTGATTTTTATGGATTAGACTGGTGAGTTCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CAA 90 bp GTGCAAAGCTGCCCTGTAGTCATGGAGGTGAACTGGGGACTTCCTGCTGTGGATAGAGTGTTTATCCCATaGGATCACCATAGGTCATCT +
Preference number: 5 (lower is better)
Translates to: VQSCPVVMEVNWGLPAVDRVFIP*DHHRSS
Trigger: AGATGACCTATGGTGATCCAATGGGATAAACACTCT...ATCCACAGCAGGAAGTCCCCAGTTCACCTCCATGACTACAGGGCAGCTTTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CAA 90 bp GTGCAAAGCTGCCCTGTAGTCATGGAGGTGAACTGGGGACTTCCTGCTGTGGATTGTAGTCTTATTCCTTaGCCAAAAGGCAGAGAAACC +
Preference number: 5 (lower is better)
Translates to: VQSCPVVMEVNWGLPAVDCSLIP*PKGRET
Trigger: GGTTTCTCTGCCTTTTGGCAAAGGAATAAGACTACA...ATCCACAGCAGGAAGTCCCCAGTTCACCTCCATGACTACAGGGCAGCTTTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CAA 90 bp GCAGCTAACATTTTCTCGAAGGGCCAGACGCTAAATATTTTAGGCCTTTGTGAGGGGACTCTTGCCACTTaGACGACACCAATCGAGGAC +
Preference number: 5 (lower is better)
Translates to: AANIFSKGQTLNILGLCEGTLAT*TTPIED
Trigger: GTCCTCGATTGGTGTCGTCAAAGTGGCAAGAGTCCC...CTCACAAAGGCCTAAAATATTTAGCGTCTGGCCCTTCGAGAAAATGTTAGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CAA 90 bp GTGCAAAGCTGCCCTGTAGTCATGGAGGTGAACTGGGGACTTCCTGCTGTGGATATTCCTCACTGTCACTaGGAAATTGCTAGCAGAATT +
Preference number: 5 (lower is better)
Translates to: VQSCPVVMEVNWGLPAVDIPHCH*EIASRI
Trigger: AATTCTGCTAGCAATTTCCAAGTGACAGTGAGGAAT...ATCCACAGCAGGAAGTCCCCAGTTCACCTCCATGACTACAGGGCAGCTTTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CAA 90 bp CCTGCCCTCCAATCTGCAGTATGCCATATTAATGATTTTCTCCCAAAGCGATGGCCCATGGGCCATACTTaGTGGACTCCTGCTCTAGAT +
Preference number: 5 (lower is better)
Translates to: PALQSAVCHINDFLPKRWPMGHT*WTPALD
Trigger: ATCTAGAGCAGGAGTCCACAAAGTATGGCCCATGGG...CCATCGCTTTGGGAGAAAATCATTAATATGGCATACTGCAGATTGGAGGGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CAA 90 bp GCAGCTAACATTTTCTCGAAGGGCCAGACGCTAAATATTTTAGGCCTTTGTGAGATGGTCTCCCAGTGTTaGGTAGGTCAGCAGAGGCAA +
Preference number: 5 (lower is better)
Translates to: AANIFSKGQTLNILGLCEMVSQC*VGQQRQ
Trigger: TTGCCTCTGCTGACCTACCAAACACTGGGAGACCAT...CTCACAAAGGCCTAAAATATTTAGCGTCTGGCCCTTCGAGAAAATGTTAGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CAA 90 bp GCAGAACTCACCAGTCTAATCCATAAAAATCACGTCGCCCATCGCTCCTTTCCTCCCATTCTCCACAGTTaGTTGCAAAGACCAGCAAAC +
Preference number: 5 (lower is better)
Translates to: AELTSLIHKNHVAHRSFPPILHS*LQRPAN
Trigger: GTTTGCTGGTCTTTGCAACAAACTGTGGAGAATGGG...AGGAAAGGAGCGATGGGCGACGTGATTTTTATGGATTAGACTGGTGAGTTCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CAA 90 bp GCTATAAGGCCAGTTCACGTAGGACCACTGGGAAAGACAAGCTTTGGCATCACCTGGGAAAGACAAGCTTaGGCATCACCACAGATTTTT +
Preference number: 5 (lower is better)
Translates to: AIRPVHVGPLGKTSFGITWERQA*ASPQIF
Trigger: AAAAATCTGTGGTGATGCCAAAGCTTGTCTTTCCCA...GGTGATGCCAAAGCTTGTCTTTCCCAGTGGTCCTACGTGAACTGGCCTTATAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CAA 90 bp GCTATAAGGCCAGTTCACGTAGGACCACTGGGAAAGACAAGCTTTGGCATCACCTGTAGTCTTATTCCTTaGCCAAAAGGCAGAGAAACC +
Preference number: 5 (lower is better)
Translates to: AIRPVHVGPLGKTSFGITCSLIP*PKGRET
Trigger: GGTTTCTCTGCCTTTTGGCAAAGGAATAAGACTACA...GGTGATGCCAAAGCTTGTCTTTCCCAGTGGTCCTACGTGAACTGGCCTTATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CAA 90 bp AGCATTACATACCACCCATTCTCCACAGTTTGTTGCAAAGACCAGCAAACACTGCCCATGGGCCATACTTaGTGGACTCCTGCTCTAGAT +
Preference number: 5 (lower is better)
Translates to: SITYHPFSTVCCKDQQTLPMGHT*WTPALD
Trigger: ATCTAGAGCAGGAGTCCACAAAGTATGGCCCATGGG...CAGTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAATGGGTGGTATGTAATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS TCA 90 bp GAGGCAATATTTAGAACAGAGCCACAACCACCAAATCGTTCATTCTaGCAGCCATATACAACCAGCGGGATTTTCATCAGGCGGAGAGCA +
Preference number: 5 (lower is better)
Translates to: EAIFRTEPQPPNRSF*QPYTTSGIFIRRRA
Trigger: TGCTCTCCGCCTGATGAAAATCCCGCTGGTTGTATATGGCTGTCAGAATGAACGATTTGGTGGTTGTGGCTCTGTTCTAAATATTGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CAA 90 bp AGCATTACATACCACCCATTCTCCACAGTTTGTTGCAAAGACCAGCAAACACTGTTAACAGGCTTCTCGTaGAAGGGAGGCCAAGGACTT +
Preference number: 5 (lower is better)
Translates to: SITYHPFSTVCCKDQQTLLTGFS*KGGQGL
Trigger: AAGTCCTTGGCCTCCCTTCAACGAGAAGCCTGTTAA...CAGTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAATGGGTGGTATGTAATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS TCA 90 bp TTTAACATTTCCACTGCTTCCTCAGCCCGATATCCAGGGATACACTaGAATGGTCTCCCAGTGTTTGGTAGGTCAGCAGAGGCAATATTT +
Preference number: 5 (lower is better)
Translates to: FNISTASSARYPGIH*NGLPVFGRSAEAIF
Trigger: AAATATTGCCTCTGCTGACCTACCAAACACTGGGAGACCATTTCAGTGTATCCCTGGATATCGGGCTGAGGAAGCAGTGGAAATGTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CAA 90 bp CAAAACCAAGCAATTATAAGTCCTCTGAAGCATGTAACTGTGATTAGCTGCTACAGGAGGAAGGATTGCTaGAGCCAGGTTGAGGCTGCA +
Preference number: 5 (lower is better)
Translates to: QNQAIISPLKHVTVISCYRRKDC*SQVEAA
Trigger: TGCAGCCTCAACCTGGCTCAAGCAATCCTTCCTCCT...GTAGCAGCTAATCACAGTTACATGCTTCAGAGGACTTATAATTGCTTGGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CAA 90 bp CAAAACCAAGCAATTATAAGTCCTCTGAAGCATGTAACTGTGATTAGCTGCTACATGGTCTCCCAGTGTTaGGTAGGTCAGCAGAGGCAA +
Preference number: 5 (lower is better)
Translates to: QNQAIISPLKHVTVISCYMVSQC*VGQQRQ
Trigger: TTGCCTCTGCTGACCTACCAAACACTGGGAGACCAT...GTAGCAGCTAATCACAGTTACATGCTTCAGAGGACTTATAATTGCTTGGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CAA 90 bp TACTCTAGAGAGGCAAAACTCCAGGTTGGTTGTCCTACAAATAATCCCCAAGAACTTGTCCAGGTCACTTaGGGTCACTTGGTTCTTTCA +
Preference number: 5 (lower is better)
Translates to: YSREAKLQVGCPTNNPQELVQVT*GHLVLS
Trigger: TGAAAGAACCAAGTGACCCAAAGTGACCTGGACAAG...TTCTTGGGGATTATTTGTAGGACAACCAACCTGGAGTTTTGCCTCTCTAGAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CAA 90 bp CAGTATCAGAAACATCTTAGGTCTATTTTCCAAAACCCTATCTTATCAGGCATAGCCTGGACTGGGCACTaGTGGCTAGAAGGGTATGCA +
Preference number: 5 (lower is better)
Translates to: QYQKHLRSIFQNPILSGIAWTGH*WLEGYA
Trigger: TGCATACCCTTCTAGCCACAAGTGCCCAGTCCAGGC...TATGCCTGATAAGATAGGGTTTTGGAAAATAGACCTAAGATGTTTCTGATACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CAA 90 bp CCTGCCCTCCAATCTGCAGTATGCCATATTAATGATTTTCTCCCAAAGCGATGGAGGCAAAACTCCAGGTaGGTTGTCCTACAAATAATC +
Preference number: 5 (lower is better)
Translates to: PALQSAVCHINDFLPKRWRQNSR*VVLQII
Trigger: GATTATTTGTAGGACAACCAACCTGGAGTTTTGCCT...CCATCGCTTTGGGAGAAAATCATTAATATGGCATACTGCAGATTGGAGGGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CAA 90 bp CCTGCCCTCCAATCTGCAGTATGCCATATTAATGATTTTCTCCCAAAGCGATGGATTCTCCACAGTTTGTaGCAAAGACCAGCAAACACT +
Preference number: 5 (lower is better)
Translates to: PALQSAVCHINDFLPKRWILHSL*QRPANT
Trigger: AGTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAAT...CCATCGCTTTGGGAGAAAATCATTAATATGGCATACTGCAGATTGGAGGGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CAA 90 bp TACTCTAGAGAGGCAAAACTCCAGGTTGGTTGTCCTACAAATAATCCCCAAGAACCCATTCTCCACAGTTaGTTGCAAAGACCAGCAAAC +
Preference number: 5 (lower is better)
Translates to: YSREAKLQVGCPTNNPQEPILHS*LQRPAN
Trigger: GTTTGCTGGTCTTTGCAACAAACTGTGGAGAATGGG...TTCTTGGGGATTATTTGTAGGACAACCAACCTGGAGTTTTGCCTCTCTAGAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CAA 90 bp GCAGAACTCACCAGTCTAATCCATAAAAATCACGTCGCCCATCGCTCCTTTCCTAGTAGCATTTTTGGTTaGGTTAACTTCATTTCTCCC +
Preference number: 5 (lower is better)
Translates to: AELTSLIHKNHVAHRSFPSSIFG*VNFISP
Trigger: GGGAGAAATGAAGTTAACCAAACCAAAAATGCTACT...AGGAAAGGAGCGATGGGCGACGTGATTTTTATGGATTAGACTGGTGAGTTCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CAA 90 bp GCAGCTAACATTTTCTCGAAGGGCCAGACGCTAAATATTTTAGGCCTTTGTGAGTGCAATGAAATCTGCTaGCAGGAAAGCATAAGAAGC +
Preference number: 5 (lower is better)
Translates to: AANIFSKGQTLNILGLCECNEIC*QESIRS
Trigger: GCTTCTTATGCTTTCCTGCAAGCAGATTTCATTGCA...CTCACAAAGGCCTAAAATATTTAGCGTCTGGCCCTTCGAGAAAATGTTAGCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CAA 90 bp CCTGCCCTCCAATCTGCAGTATGCCATATTAATGATTTTCTCCCAAAGCGATGGACTGTCACTTGGAAATaGCTAGCAGAATTCCATAGA +
Preference number: 5 (lower is better)
Translates to: PALQSAVCHINDFLPKRWTVTWK*LAEFHR
Trigger: TCTATGGAATTCTGCTAGCAATTTCCAAGTGACAGT...CCATCGCTTTGGGAGAAAATCATTAATATGGCATACTGCAGATTGGAGGGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS CCA 90 bp CCCATCAGCATGACTAAAGTGAAACGTAAAAACAACATCAAATGCTaGCAAGGCTGTGGAGAAGTGATATTACTCATATACTGCTGGTCG +
Preference number: 5 (lower is better)
Translates to: PISMTKVKRKNNIKC*QGCGEVILLIYCWS
Trigger: CGACCAGCAGTATATGAGTAATATCACTTCTCCACAGCCTTGCCAGCATTTGATGTTGTTTTTACGTTTCACTTTAGTCATGCTGATGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606514.5
CDS-3UTR CAA 90 bp AAAGCATTACATACCACCCATTCTCCACAGTTTGTTGCAAAGACCAGCAAACACGTCACTTTGGGTCACTaGGTTCTTTCATCAGAACAT +
Preference number: 5 (lower is better)
Translates to: KALHTTHSPQFVAKTSKHVTLGH*VLSSEH
Trigger: ATGTTCTGATGAAAGAACCAAGTGACCCAAAGTGAC...GTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAATGGGTGGTATGTAATGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CAA 90 bp TACTCTAGAGAGGCAAAACTCCAGGTTGGTTGTCCTACAAATAATCCCCAAGAAGTCACTTTGGGTCACTaGGTTCTTTCATCAGAACAT +
Preference number: 5 (lower is better)
Translates to: YSREAKLQVGCPTNNPQEVTLGH*VLSSEH
Trigger: ATGTTCTGATGAAAGAACCAAGTGACCCAAAGTGAC...TTCTTGGGGATTATTTGTAGGACAACCAACCTGGAGTTTTGCCTCTCTAGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CAA 90 bp CAGTATCAGAAACATCTTAGGTCTATTTTCCAAAACCCTATCTTATCAGGCATACTAAGAAGTCAGCACTaGCCTGGACTGGGCACTTGT +
Preference number: 5 (lower is better)
Translates to: QYQKHLRSIFQNPILSGILRSQH*PGLGTC
Trigger: ACAAGTGCCCAGTCCAGGCAAGTGCTGACTTCTTAG...TATGCCTGATAAGATAGGGTTTTGGAAAATAGACCTAAGATGTTTCTGATACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CAA 90 bp TACTCTAGAGAGGCAAAACTCCAGGTTGGTTGTCCTACAAATAATCCCCAAGAACATATCCATCTCCCCTaGCTAGAATATAAGCTCCAT +
Preference number: 5 (lower is better)
Translates to: YSREAKLQVGCPTNNPQEHIHLP*LEYKLH
Trigger: ATGGAGCTTATATTCTAGCAAGGGGAGATGGATATG...TTCTTGGGGATTATTTGTAGGACAACCAACCTGGAGTTTTGCCTCTCTAGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CAA 90 bp AAAGCATTACATACCACCCATTCTCCACAGTTTGTTGCAAAGACCAGCAAACACATTCTCCACAGTTTGTaGCAAAGACCAGCAAACACT +
Preference number: 5 (lower is better)
Translates to: KALHTTHSPQFVAKTSKHILHSL*QRPANT
Trigger: AGTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAAT...GTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAATGGGTGGTATGTAATGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CAA 90 bp AAAGCATTACATACCACCCATTCTCCACAGTTTGTTGCAAAGACCAGCAAACACCTTTACAGGACATTATaGGGTCAGCTGACAAAACTG +
Preference number: 5 (lower is better)
Translates to: KALHTTHSPQFVAKTSKHLYRTL*GQLTKL
Trigger: CAGTTTTGTCAGCTGACCCAATAATGTCCTGTAAAG...GTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAATGGGTGGTATGTAATGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CAA 90 bp TACTCTAGAGAGGCAAAACTCCAGGTTGGTTGTCCTACAAATAATCCCCAAGAAAGAGTGTTTATCCCATaGGATCACCATAGGTCATCT +
Preference number: 5 (lower is better)
Translates to: YSREAKLQVGCPTNNPQERVFIP*DHHRSS
Trigger: AGATGACCTATGGTGATCCAATGGGATAAACACTCT...TTCTTGGGGATTATTTGTAGGACAACCAACCTGGAGTTTTGCCTCTCTAGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CAA 90 bp TACTCTAGAGAGGCAAAACTCCAGGTTGGTTGTCCTACAAATAATCCCCAAGAATGGGAAAGACAAGCTTaGGCATCACCACAGATTTTT +
Preference number: 5 (lower is better)
Translates to: YSREAKLQVGCPTNNPQEWERQA*ASPQIF
Trigger: AAAAATCTGTGGTGATGCCAAAGCTTGTCTTTCCCA...TTCTTGGGGATTATTTGTAGGACAACCAACCTGGAGTTTTGCCTCTCTAGAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CAA 90 bp GCAGCTAACATTTTCTCGAAGGGCCAGACGCTAAATATTTTAGGCCTTTGTGAGTCCGAACTTTCGATTTaGGTGCATTTGGATTTTCTT +
Preference number: 5 (lower is better)
Translates to: AANIFSKGQTLNILGLCESELSI*VHLDFL
Trigger: AAGAAAATCCAAATGCACCAAAATCGAAAGTTCGGA...CTCACAAAGGCCTAAAATATTTAGCGTCTGGCCCTTCGAGAAAATGTTAGCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CAA 90 bp CAGTATCAGAAACATCTTAGGTCTATTTTCCAAAACCCTATCTTATCAGGCATATTAACAGGCTTCTCGTaGAAGGGAGGCCAAGGACTT +
Preference number: 5 (lower is better)
Translates to: QYQKHLRSIFQNPILSGILTGFS*KGGQGL
Trigger: AAGTCCTTGGCCTCCCTTCAACGAGAAGCCTGTTAA...TATGCCTGATAAGATAGGGTTTTGGAAAATAGACCTAAGATGTTTCTGATACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS TCA 90 bp CATGATAATAATATAGTGAGAACTTGCCACTATAAAAATGATTTATaGGGTATCCTCCCCATGATCCAAACTTCCCACCAGGCCCTGCTA +
Preference number: 5 (lower is better)
Translates to: HDNNIVRTCHYKNDL*GILPMIQTSHQALL
Trigger: TAGCAGGGCCTGGTGGGAAGTTTGGATCATGGGGAGGATACCTCATAAATCATTTTTATAGTGGCAAGTTCTCACTATATTATTATCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606514.5
CDS-3UTR CAA 90 bp AAAGCATTACATACCACCCATTCTCCACAGTTTGTTGCAAAGACCAGCAAACACAGTAGCATTTTTGGTTaGGTTAACTTCATTTCTCCC +
Preference number: 5 (lower is better)
Translates to: KALHTTHSPQFVAKTSKHSSIFG*VNFISP
Trigger: GGGAGAAATGAAGTTAACCAAACCAAAAATGCTACT...GTGTTTGCTGGTCTTTGCAACAAACTGTGGAGAATGGGTGGTATGTAATGCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CAA 90 bp TACTCTAGAGAGGCAAAACTCCAGGTTGGTTGTCCTACAAATAATCCCCAAGAAAAGGGTATGCACTACTaGCTAATTTCTAAAACCTCA +
Preference number: 5 (lower is better)
Translates to: YSREAKLQVGCPTNNPQEKGMHY*LISKTS
Trigger: TGAGGTTTTAGAAATTAGCAAGTAGTGCATACCCTT...TTCTTGGGGATTATTTGTAGGACAACCAACCTGGAGTTTTGCCTCTCTAGAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CAA 90 bp CAAAACCAAGCAATTATAAGTCCTCTGAAGCATGTAACTGTGATTAGCTGCTACCATATCCATCTCCCCTaGCTAGAATATAAGCTCCAT +
Preference number: 5 (lower is better)
Translates to: QNQAIISPLKHVTVISCYHIHLP*LEYKLH
Trigger: ATGGAGCTTATATTCTAGCAAGGGGAGATGGATATG...GTAGCAGCTAATCACAGTTACATGCTTCAGAGGACTTATAATTGCTTGGTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CAA 90 bp TACTCTAGAGAGGCAAAACTCCAGGTTGGTTGTCCTACAAATAATCCCCAAGAATCAAGAGTAGAGTTCTaGCAAAATGAACTTAACAGG +
Preference number: 5 (lower is better)
Translates to: YSREAKLQVGCPTNNPQESRVEF*QNELNR
Trigger: CCTGTTAAGTTCATTTTGCAAGAACTCTACTCTTGA...TTCTTGGGGATTATTTGTAGGACAACCAACCTGGAGTTTTGCCTCTCTAGAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CAA 90 bp CAAAACCAAGCAATTATAAGTCCTCTGAAGCATGTAACTGTGATTAGCTGCTACACTGTCACTTGGAAATaGCTAGCAGAATTCCATAGA +
Preference number: 5 (lower is better)
Translates to: QNQAIISPLKHVTVISCYTVTWK*LAEFHR
Trigger: TCTATGGAATTCTGCTAGCAATTTCCAAGTGACAGT...GTAGCAGCTAATCACAGTTACATGCTTCAGAGGACTTATAATTGCTTGGTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CAA 90 bp CAGTATCAGAAACATCTTAGGTCTATTTTCCAAAACCCTATCTTATCAGGCATAAGGCAAAACTCCAGGTaGGTTGTCCTACAAATAATC +
Preference number: 5 (lower is better)
Translates to: QYQKHLRSIFQNPILSGIRQNSR*VVLQII
Trigger: GATTATTTGTAGGACAACCAACCTGGAGTTTTGCCT...TATGCCTGATAAGATAGGGTTTTGGAAAATAGACCTAAGATGTTTCTGATACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CAA 90 bp CAGTATCAGAAACATCTTAGGTCTATTTTCCAAAACCCTATCTTATCAGGCATATCCGAACTTTCGATTTaGGTGCATTTGGATTTTCTT +
Preference number: 5 (lower is better)
Translates to: QYQKHLRSIFQNPILSGISELSI*VHLDFL
Trigger: AAGAAAATCCAAATGCACCAAAATCGAAAGTTCGGA...TATGCCTGATAAGATAGGGTTTTGGAAAATAGACCTAAGATGTTTCTGATACTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS-3UTR CAA 90 bp CAGTATCAGAAACATCTTAGGTCTATTTTCCAAAACCCTATCTTATCAGGCATATCAAGAGTAGAGTTCTaGCAAAATGAACTTAACAGG +
Preference number: 5 (lower is better)
Translates to: QYQKHLRSIFQNPILSGISRVEF*QNELNR
Trigger: CCTGTTAAGTTCATTTTGCAAGAACTCTACTCTTGA...TATGCCTGATAAGATAGGGTTTTGGAAAATAGACCTAAGATGTTTCTGATACTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS GCA 72 bp CGACACCGAGCACGCGCCGCTTGCAGCTGGCTTGGGTaGCGCCTTCGCCTCCATACCCAGCCACCACTCAGC +
Preference number: 6 (lower is better)
Translates to: RHRARAACSWLG*RLRLHTQPPLS
Trigger: GCTGAGTGGTGGCTGGGTATGGAGGCGAAGGCGGCACCCAAGCCAGCTGCAAGCGGCGCGTGCTCGGTGTCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237283.9
CDS CCA 72 bp CTGCCGACACCGAGCACGCGCCGCTTGCAGCTGGCTTaGGTGCCGCCTTCGCCTCCATACCCAGCCACCACT +
Preference number: 6 (lower is better)
Translates to: LPTPSTRRLQLA*VPPSPPYPATT
Trigger: AGTGGTGGCTGGGTATGGAGGCGAAGGCGGCACCCAAGCCAGCTGCAAGCGGCGCGTGCTCGGTGTCGGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000367593.1
CDS CCA 72 bp CTCCTCTGCCGACACCGAGCACGCGCCGCTTGCAGCTaGCTTGGGTGCCGCCTTCGCCTCCATACCCAGCCA +
Preference number: 6 (lower is better)
Translates to: LLCRHRARAACS*LGCRLRLHTQP
Trigger: TGGCTGGGTATGGAGGCGAAGGCGGCACCCAAGCCAGCTGCAAGCGGCGCGTGCTCGGTGTCGGCAGAGGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000367593.1
CDS CAA 72 bp TCTGCCGACACCGAGCACGCGCCGCTTGCAGCTGGCTaGGGTGCCGCCTTCGCCTCCATACCCAGCCACCAC +
Preference number: 6 (lower is better)
Translates to: SADTEHAPLAAG*GAAFASIPSHH
Trigger: GTGGTGGCTGGGTATGGAGGCGAAGGCGGCACCCAAGCCAGCTGCAAGCGGCGCGTGCTCGGTGTCGGCAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000367593.1
CDS GCA 72 bp TTCGGTCTCCTCTGCCGACACCGAGCACGCGCCGCTTaGAGCTGGCTTGGGTGCCGCCTTCGCCTCCATACC +
Preference number: 6 (lower is better)
Translates to: FGLLCRHRARAA*SWLGCRLRLHT
Trigger: GGTATGGAGGCGAAGGCGGCACCCAAGCCAGCTGCAAGCGGCGCGTGCTCGGTGTCGGCAGAGGAGACCGAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000367593.1
CDS CAA 90 bp TCGGTCTCCTCTGCCGACACCGAGCACGCGCCGCTTGCAGCTGGCTaGGGTGCCGCCTTCGCCTCCATACCCAGCCACCACTCAGCTACA +
Preference number: 6 (lower is better)
Translates to: SVSSADTEHAPLAAG*GAAFASIPSHHSAT
Trigger: TGTAGCTGAGTGGTGGCTGGGTATGGAGGCGAAGGCGGCACCCAAGCCAGCTGCAAGCGGCGCGTGCTCGGTGTCGGCAGAGGAGACCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237283.9
CDS CAA 90 bp CCATCCACTTTTCGGTCTCCTCTGCCGACACCGAGCACGCGCCGCTaGCAGCTGGCTTGGGTGCCGCCTTCGCCTCCATACCCAGCCACC +
Preference number: 6 (lower is better)
Translates to: PSTFRSPLPTPSTRR*QLAWVPPSPPYPAT
Trigger: GGTGGCTGGGTATGGAGGCGAAGGCGGCACCCAAGCCAGCTGCAAGCGGCGCGTGCTCGGTGTCGGCAGAGGAGACCGAAAAGTGGATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000367593.1
CDS CAA 72 bp TTTCGGTCTCCTCTGCCGACACCGAGCACGCGCCGCTaGCAGCTGGCTTGGGTGCCGCCTTCGCCTCCATAC +
Preference number: 6 (lower is better)
Translates to: FRSPLPTPSTRR*QLAWVPPSPPY
Trigger: GTATGGAGGCGAAGGCGGCACCCAAGCCAGCTGCAAGCGGCGCGTGCTCGGTGTCGGCAGAGGAGACCGAAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000367593.1
CDS GCA 72 bp GTGCATCGCCTCCTCCATCCACTTTTCGGTCTCCTCTaGCGACACCGAGCACGCGCCGCTTGCAGCTGGCTT +
Preference number: 6 (lower is better)
Translates to: VHRLLHPLFGLL*RHRARAACSWL
Trigger: AAGCCAGCTGCAAGCGGCGCGTGCTCGGTGTCGGCAGAGGAGACCGAAAAGTGGATGGAGGAGGCGATGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000367593.1
CDS TCA 72 bp TCCACTGCTTCCTCAGCCCGATATCCAGGGATACACTaGAATGGTCTCCCAGTGTTTGGTAGGTCAGCAGAG +
Preference number: 6 (lower is better)
Translates to: STASSARYPGIH*NGLPVFGRSAE
Trigger: CTCTGCTGACCTACCAAACACTGGGAGACCATTTCAGTGTATCCCTGGATATCGGGCTGAGGAAGCAGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS TCA 72 bp CTGTACAAGAAGTATGGTATCAGCATCTGCTTCCAGTaGGGGCCTCAGGAAGCTTCCACTCATGGCAGAAGG +
Preference number: 6 (lower is better)
Translates to: LYKKYGISICFQ*GPQEASTHGRR
Trigger: CCTTCTGCCATGAGTGGAAGCTTCCTGAGGCCCTCACTGGAAGCAGATGCTGATACCATACTTCTTGTACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606514.5
CDS CAA 90 bp CCTCAGCCCGATATCCAGGGATACACTGAAATGGTCTCCCAGTGTTaGGTAGGTCAGCAGAGGCAATATTTAGAACAGAGCCACAACCAC +
Preference number: 6 (lower is better)
Translates to: PQPDIQGYTEMVSQC*VGQQRQYLEQSHNH
Trigger: GTGGTTGTGGCTCTGTTCTAAATATTGCCTCTGCTGACCTACCAAACACTGGGAGACCATTTCAGTGTATCCCTGGATATCGGGCTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS CCA 72 bp GCTTCTTTGGCAGTTCTCCAGACTGTACAAGAAGTATaGTATCAGCATCTGCTTCCAGTGAGGGCCTCAGGA +
Preference number: 6 (lower is better)
Translates to: ASLAVLQTVQEV*YQHLLPVRASG
Trigger: TCCTGAGGCCCTCACTGGAAGCAGATGCTGATACCATACTTCTTGTACAGTCTGGAGAACTGCCAAAGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606514.5
CDS CAA 72 bp GATATCCAGGGATACACTGAAATGGTCTCCCAGTGTTaGGTAGGTCAGCAGAGGCAATATTTAGAACAGAGC +
Preference number: 6 (lower is better)
Translates to: DIQGYTEMVSQC*VGQQRQYLEQS
Trigger: GCTCTGTTCTAAATATTGCCTCTGCTGACCTACCAAACACTGGGAGACCATTTCAGTGTATCCCTGGATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS CCA 72 bp AGCCAACAGGAACTTCAGTATTTTCGAGGGCTTCTTTaGCAGTTCTCCAGACTGTACAAGAAGTATGGTATC +
Preference number: 6 (lower is better)
Translates to: SQQELQYFRGLL*QFSRLYKKYGI
Trigger: GATACCATACTTCTTGTACAGTCTGGAGAACTGCCAAAGAAGCCCTCGAAAATACTGAAGTTCCTGTTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606514.5
CDS CAA 72 bp AACAGCTTTCAGTCTATGAATCTTGTCCAGGTCACTTaGGGTCACTTGGTTCTTTCATCAGAACATGTTCAA +
Preference number: 6 (lower is better)
Translates to: NSFQSMNLVQVT*GHLVLSSEHVQ
Trigger: TTGAACATGTTCTGATGAAAGAACCAAGTGACCCAAAGTGACCTGGACAAGATTCATAGACTGAAAGCTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237283.9
ENST00000606514.5
CDS TCA 72 bp AAAACAACATCAAATGCTGGCAAGGCTGTGGAGAAGTaGTATTACTCATATACTGCTGGTCGGAATATAAAA +
Preference number: 6 (lower is better)
Translates to: KTTSNAGKAVEK*YYSYTAGRNIK
Trigger: TTTTATATTCCGACCAGCAGTATATGAGTAATATCACTTCTCCACAGCCTTGCCAGCATTTGATGTTGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606514.5
CDS CCA 72 bp CTACTAATACCAGGGATTCAATTTCAACATGAAATTTaGAGGCGACAAATATCCAAACTATATGAGAAGGCA +
Preference number: 6 (lower is better)
Translates to: LLIPGIQFQHEI*RRQISKLYEKA
Trigger: TGCCTTCTCATATAGTTTGGATATTTGTCGCCTCCAAATTTCATGTTGAAATTGAATCCCTGGTATTAGTAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606514.5