RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADAT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000065457

Ensembl transcript IDs: ENST00000307921.7, ENST00000562374.1, ENST00000564657.2, ENST00000565109.5, ENST00000566445.5, ENST00000567281.5, ENST00000568001.5, ENST00000568478.1, ENST00000568510.1

Found 500 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTTCTGTCTCCACGGCCTGGCTTCACTCGGAGCAGCCCCACCTGGTaGAACGCAGCACCCGGCTTTCCGGAGTCTCCAGCTTCTCCAGGT +
Preference number: 1 (lower is better)
Translates to: VLSPRPGFTRSSPTW*NAAPGFPESPASPG
Trigger: ACCTGGAGAAGCTGGAGACTCCGGAAAGCCGGGTGCTGCGTTTCACCAGGTGGGGCTGCTCCGAGTGAAGCCAGGCCGTGGAGACAGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566445.5
3UTR CCA 90 bp CATCTTGTCACTACAGGACATGGAGCGTGTTCTGTCTCCACGGCCTaGCTTCACTCGGAGCAGCCCCACCTGGTGAAACGCAGCACCCGG +
Preference number: 1 (lower is better)
Translates to: HLVTTGHGACSVSTA*LHSEQPHLVKRSTR
Trigger: CCGGGTGCTGCGTTTCACCAGGTGGGGCTGCTCCGAGTGAAGCCAGGCCGTGGAGACAGAACACGCTCCATGTCCTGTAGTGACAAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566445.5
3UTR CCA 90 bp AACTGCACTCCAGCTGATGGCTGCCCCACAAGGAACAAGTCGACCTaGGCTATCAGCCCTTTTTGCCTGCACCGCACTGCGGCTCTGTTC +
Preference number: 1 (lower is better)
Translates to: NCTPADGCPTRNKST*AISPFCLHRTAALF
Trigger: GAACAGAGCCGCAGTGCGGTGCAGGCAAAAAGGGCTGATAGCCCAGGTCGACTTGTTCCTTGTGGGGCAGCCATCAGCTGGAGTGCAGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566445.5
3UTR TCA 90 bp CTGCATGGCTTCCTGGCTGTATGGGCACTTCCCAATGACCACAGCTaGCAGGTAGATGGGCTCTTCCAGCAAGTGCATCAACAGTGCCCC +
Preference number: 1 (lower is better)
Translates to: LHGFLAVWALPNDHS*QVDGLFQQVHQQCP
Trigger: GGGGCACTGTTGATGCACTTGCTGGAAGAGCCCATCTACCTGTCAGCTGTGGTCATTGGGAAGTGCCCATACAGCCAGGAAGCCATGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566445.5
3UTR TCA 90 bp TCAGTGCTCTCTGCATGGCTTCCTGGCTGTATGGGCACTTCCCAATaGCCACAGCTGACAGGTAGATGGGCTCTTCCAGCAAGTGCATCA +
Preference number: 1 (lower is better)
Translates to: SVLSAWLPGCMGTSQ*PQLTGRWALPASAS
Trigger: TGATGCACTTGCTGGAAGAGCCCATCTACCTGTCAGCTGTGGTCATTGGGAAGTGCCCATACAGCCAGGAAGCCATGCAGAGAGCACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566445.5
3UTR CCA 90 bp CAGCACCCGGCTTTCCGGAGTCTCCAGCTTCTCCAGGTACACACTTaGCTCCAGTTCTATAAACGTCTATCACTTTGGCACTACCAGGGG +
Preference number: 1 (lower is better)
Translates to: QHPAFRSLQLLQVHT*LQFYKRLSLWHYQG
Trigger: CCCCTGGTAGTGCCAAAGTGATAGACGTTTATAGAACTGGAGCCAAGTGTGTACCTGGAGAAGCTGGAGACTCCGGAAAGCCGGGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566445.5
3UTR GCA 90 bp GCCCCACAAGGAACAAGTCGACCTGGGCTATCAGCCCTTTTTGCCTaGACCGCACTGCGGCTCTGTTCAAATAGTAAATCTGACTGCAGT +
Preference number: 1 (lower is better)
Translates to: APQGTSRPGLSALFA*TALRLCSNSKSDCS
Trigger: ACTGCAGTCAGATTTACTATTTGAACAGAGCCGCAGTGCGGTGCAGGCAAAAAGGGCTGATAGCCCAGGTCGACTTGTTCCTTGTGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566445.5
3UTR TCA 90 bp AGTAGCCAGTCCCTCTACAGTGAGATCACAGCTGTGGATGCCTGGTaGGATTGGGCCACTTTTCTGCTTGCCAAAACTCTGATGGTGAGC +
Preference number: 1 (lower is better)
Translates to: SSQSLYSEITAVDAW*DWATFLLAKTLMVS
Trigger: GCTCACCATCAGAGTTTTGGCAAGCAGAAAAGTGGCCCAATCTCACCAGGCATCCACAGCTGTGATCTCACTGTAGAGGGACTGGCTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566445.5
3UTR TCA 90 bp CAAGCCAAGGACTGCCAGGAGCCATCAGAAGCTAAGGAGGAAGCATaGAAGAGTCTTCTTCAGAGCAGCAGTCCCCAAGGCACGAAAAAG +
Preference number: 1 (lower is better)
Translates to: QAKDCQEPSEAKEEA*KSLLQSSSPQGTKK
Trigger: CTTTTTCGTGCCTTGGGGACTGCTGCTCTGAAGAAGACTCTTTCATGCTTCCTCCTTAGCTTCTGATGGCTCCTGGCAGTCCTTGGCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564657.2
3UTR GCA 90 bp TTTGTTGTTCCCTGTGGAAAGCCATTGGCAGTAACATCCAAAGGCTaGTCAGGAACTGCACTCCAGCTGATGGCTGCCCCACAAGGAACA +
Preference number: 1 (lower is better)
Translates to: FVVPCGKPLAVTSKG*SGTALQLMAAPQGT
Trigger: TGTTCCTTGTGGGGCAGCCATCAGCTGGAGTGCAGTTCCTGAGCAGCCTTTGGATGTTACTGCCAATGGCTTTCCACAGGGAACAACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566445.5
3UTR TCA 90 bp ACTGATGAGTTGTGGGCCCAATTTCTGAAGACAGGACAGCAAGGCTaGTCTTCAAACTCAAGCATCGGAATGATGGAGGCATCCCCACAG +
Preference number: 1 (lower is better)
Translates to: TDELWAQFLKTGQQG*SSNSSIGMMEASPQ
Trigger: CTGTGGGGATGCCTCCATCATTCCGATGCTTGAGTTTGAAGATCAGCCTTGCTGTCCTGTCTTCAGAAATTGGGCCCACAACTCATCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566445.5
3UTR CCA 90 bp AGGGAGTGTGGCCACTTGTCCCTTGCAATTCTGCTTAGCAGCTTCTaGAATGATCTGAAGAGTTCCACTTTGCTGATTTGGGATCTTGCC +
Preference number: 1 (lower is better)
Translates to: RECGHLSLAILLSSF*NDLKSSTLLIWDLA
Trigger: GGCAAGATCCCAAATCAGCAAAGTGGAACTCTTCAGATCATTCCAGAAGCTGCTAAGCAGAATTGCAAGGGACAAGTGGCCACACTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566445.5
3UTR GCA 90 bp GAACAAGTCGACCTGGGCTATCAGCCCTTTTTGCCTGCACCGCACTaGGGCTCTGTTCAAATAGTAAATCTGACTGCAGTATTTTTAATT +
Preference number: 1 (lower is better)
Translates to: EQVDLGYQPFLPAPH*GSVQIVNLTAVFLI
Trigger: AATTAAAAATACTGCAGTCAGATTTACTATTTGAACAGAGCCGCAGTGCGGTGCAGGCAAAAAGGGCTGATAGCCCAGGTCGACTTGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000566445.5
3UTR CCA 90 bp AGTAGGAGCCCTGAGCTTGTTTTCCTGCAACTAGACAGTCCCATATaGGGGTTATGGAAGACACTGACAGATCATCAGGCATTATATTCT +
Preference number: 1 (lower is better)
Translates to: SRSPELVFLQLDSPI*GLWKTLTDHQALYS
Trigger: AGAATATAATGCCTGATGATCTGTCAGTGTCTTCCATAACCCCCATATGGGACTGTCTAGTTGCAGGAAAACAAGCTCAGGGCTCCTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564657.2
3UTR CCA 90 bp CAAGGTCTGAAGTTGAGTGTTAAACATTCGATGTTAAAACAGGATTaGCTGCTGGGTCTATTGCTGATTTGCTGCAGGGCCTTTTGGCTT +
Preference number: 1 (lower is better)
Translates to: QGLKLSVKHSMLKQD*LLGLLLICCRAFWL
Trigger: AAGCCAAAAGGCCCTGCAGCAAATCAGCAATAGACCCAGCAGCCAATCCTGTTTTAACATCGAATGTTTAACACTCAACTTCAGACCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564657.2
3UTR CCA 90 bp CCTGAGCTTGTTTTCCTGCAACTAGACAGTCCCATATGGGGGTTATaGAAGACACTGACAGATCATCAGGCATTATATTCTCATAAGGAG +
Preference number: 1 (lower is better)
Translates to: PELVFLQLDSPIWGL*KTLTDHQALYSHKE
Trigger: CTCCTTATGAGAATATAATGCCTGATGATCTGTCAGTGTCTTCCATAACCCCCATATGGGACTGTCTAGTTGCAGGAAAACAAGCTCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564657.2
3UTR GCA 90 bp ATAAATACAGATGAAACTTCAAGTGCTCACCTGTTACTTATCTCCTaGTGTGTGACCTTGTTCCTGACAGGCCACAGACAAGTAATGGTC +
Preference number: 1 (lower is better)
Translates to: INTDETSSAHLLLIS*CVTLFLTGHRQVMV
Trigger: GACCATTACTTGTCTGTGGCCTGTCAGGAACAAGGTCACACAGCAGGAGATAAGTAACAGGTGAGCACTTGAAGTTTCATCTGTATTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564657.2
3UTR GCA 90 bp GCAATAAAACACAATGGAAGTCAGATAGTGAGGTCATTAGTGAGATaGCATTTTAGCAGAGAGCTACTTCAATCAAGTATAGCTTGCTCT +
Preference number: 1 (lower is better)
Translates to: AIKHNGSQIVRSLVR*HFSRELLQSSIACS
Trigger: AGAGCAAGCTATACTTGATTGAAGTAGCTCTCTGCTAAAATGGCATCTCACTAATGACCTCACTATCTGACTTCCATTGTGTTTTATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000566445.5
3UTR-3UTR GCA 90 bp GACCTGGGCTATCAGCCCTTTTTGCCTGCACCGCACTGCGGCTCTGTTCAAATAACTCTGATGGTGAGCTaGTCCGTTGGTGACCTCCCT +
Preference number: 2 (lower is better)
Translates to: DLGYQPFLPAPHCGSVQITLMVS*SVGDLP
Trigger: AGGGAGGTCACCAACGGAGCAGCTCACCATCAGAGT...TATTTGAACAGAGCCGCAGTGCGGTGCAGGCAAAAAGGGCTGATAGCCCAGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566445.5
3UTR-3UTR GCA 90 bp CCCCACAAGGAACAAGTCGACCTGGGCTATCAGCCCTTTTTGCCTGCACCGCACTTCCTGGGACAAAGATaGTATCCTCTTTCAGGGTGG +
Preference number: 2 (lower is better)
Translates to: PHKEQVDLGYQPFLPAPHFLGQR*YPLSGW
Trigger: CCACCCTGAAAGAGGATAGCATCTTTGTCCCAGGAA...GTGCGGTGCAGGCAAAAAGGGCTGATAGCCCAGGTCGACTTGTTCCTTGTGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566445.5
3UTR-3UTR CCA 90 bp CTTGTCCTGCGTGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCAAAGACTTGTCCTGCGTaGAGGAAGGCAGTTCAGGAT +
Preference number: 2 (lower is better)
Translates to: LVLRGGRQFRMKGPATRAKTCPA*RKAVQD
Trigger: ATCCTGAACTGCCTTCCTCCACGCAGGACAAGTCTT...TGCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCACGCAGGACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
3UTR CAA 90 bp TGGCTGCCCCACAAGGAACAAGTCGACCTGGGCTATCAGCCCTTTTaGCCTGCACCGCACTGCGGCTCTGTTCAAATAGTAAATCTGACT +
Preference number: 2 (lower is better)
Translates to: WLPHKEQVDLGYQPF*PAPHCGSVQIVNLT
Trigger: AGTCAGATTTACTATTTGAACAGAGCCGCAGTGCGGTGCAGGCAAAAAGGGCTGATAGCCCAGGTCGACTTGTTCCTTGTGGGGCAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566445.5
3UTR-3UTR TCA 90 bp ACAGACACAGGGAAGAAGGCCATGCGAGACACAGACACAGAAGGCCATGTGAAGAGGGAGAAACTGAAGTaGTGCAGCCACAAGCCAAGG +
Preference number: 2 (lower is better)
Translates to: TDTGKKAMRDTDTEGHVKREKLK*CSHKPR
Trigger: CCTTGGCTTGTGGCTGCATCACTTCAGTTTCTCCCT...CTTCACATGGCCTTCTGTGTCTGTGTCTCGCATGGCCTTCTTCCCTGTGTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000568510.1
3UTR-3UTR GCA 90 bp AGGGAAGAAGGCCATGCGAGACACAGACACAGAAGGCCATGTGAAGACGGAGGGCAGGATGAAGGGTCCTaGTACCAGAGCAAACATTTC +
Preference number: 2 (lower is better)
Translates to: REEGHARHRHRRPCEDGGQDEGS*YQSKHF
Trigger: GAAATGTTTGCTCTGGTAGCAGGACCCTTCATCCTG...CCCTCCGTCTTCACATGGCCTTCTGTGTCTGTGTCTCGCATGGCCTTCTTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564657.2
3UTR-3UTR GCA 90 bp AGGGAAGAAGGCCATGCGAGACACAGACACAGAAGGCCATGTGAAGACGGAGGGGGTCTATTGCTGATTTaGTGCAGGGCCTTTTGGCTT +
Preference number: 2 (lower is better)
Translates to: REEGHARHRHRRPCEDGGGLLLI*CRAFWL
Trigger: AAGCCAAAAGGCCCTGCAGCAAATCAGCAATAGACC...CCCTCCGTCTTCACATGGCCTTCTGTGTCTGTGTCTCGCATGGCCTTCTTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564657.2
3UTR-3UTR GCA 90 bp AGATCAAAACAGAAAGCCTTTCCTGATACCTCTGAGAACAAGTCCAGGGCAGTCCCTGCTTCCGGAGTGTaGTCCAGGCTTCCTGGTAAG +
Preference number: 2 (lower is better)
Translates to: RSKQKAFPDTSENKSRAVPASGV*SRLPGK
Trigger: CTTACCAGGAAGCCTGGAGCACACTCCGGAAGCAGG...GACTGCCCTGGACTTGTTCTCAGAGGTATCAGGAAAGGCTTTCTGTTTTGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566445.5
3UTR-3UTR CCA 90 bp GACCTGGGCTATCAGCCCTTTTTGCCTGCACCGCACTGCGGCTCTGTTCAAATACAAGCCTCATCTTTTTaGTTACAGGACTGTCAGGGT +
Preference number: 2 (lower is better)
Translates to: DLGYQPFLPAPHCGSVQIQASSF*LQDCQG
Trigger: ACCCTGACAGTCCTGTAACCAAAAAGATGAGGCTTG...TATTTGAACAGAGCCGCAGTGCGGTGCAGGCAAAAAGGGCTGATAGCCCAGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000566445.5
3UTR-3UTR CCA 90 bp CTTTGTTGTTCCCTGTGGAAAGCCATTGGCAGTAACATCCAAAGGCTGCTCAGGCAGCTGACAGGTAGATaGGCTCTTCCAGCAAGTGCA +
Preference number: 2 (lower is better)
Translates to: LCCSLWKAIGSNIQRLLRQLTGR*ALPASA
Trigger: TGCACTTGCTGGAAGAGCCCATCTACCTGTCAGCTG...CCTGAGCAGCCTTTGGATGTTACTGCCAATGGCTTTCCACAGGGAACAACAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566445.5
3UTR CAA 90 bp GAAACTTCAAGTGCTCACCTGTTACTTATCTCCTGCTGTGTGACCTaGTTCCTGACAGGCCACAGACAAGTAATGGTCTGTGGCTCTGGG +
Preference number: 2 (lower is better)
Translates to: ETSSAHLLLISCCVT*FLTGHRQVMVCGSG
Trigger: CCCAGAGCCACAGACCATTACTTGTCTGTGGCCTGTCAGGAACAAGGTCACACAGCAGGAGATAAGTAACAGGTGAGCACTTGAAGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564657.2
3UTR-3UTR CCA 90 bp AAACTCAAGCATCGGAATGATGGAGGCATCCCCACAGGGTGTATGGCTGGAGAAGCCAACTGGAGTTGGTaGAGAAGGTACCTTTGGAAA +
Preference number: 2 (lower is better)
Translates to: KLKHRNDGGIPTGCMAGEANWSW*RRYLWK
Trigger: TTTCCAAAGGTACCTTCTCCACCAACTCCAGTTGGC...TTCTCCAGCCATACACCCTGTGGGGATGCCTCCATCATTCCGATGCTTGAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566445.5
3UTR-3UTR CCA 90 bp GAGGAACGGGAAGTGACTGCTAATGGGTTCTGCAATGGGTTGAGTGGTGTCCCCAAGATGAAATCAGACTaGATTAGGGCAGGCCCTAAA +
Preference number: 2 (lower is better)
Translates to: EEREVTANGFCNGLSGVPKMKSD*IRAGPK
Trigger: TTTAGGGCCTGCCCTAATCCAGTCTGATTTCATCTT...GGGGACACCACTCAACCCATTGCAGAACCCATTAGCAGTCACTTCCCGTTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000568510.1
3UTR-3UTR CCA 90 bp TCTTCAGAGCAGCAGTCCCCAAGGCACGAAAAAGTCTTCCTTAGAGCAGCAGTCCTAGACAGTCCCATATaGGGGTTATGGAAGACACTG +
Preference number: 2 (lower is better)
Translates to: SSEQQSPRHEKVFLRAAVLDSPI*GLWKTL
Trigger: CAGTGTCTTCCATAACCCCCATATGGGACTGTCTAG...GACTGCTGCTCTAAGGAAGACTTTTTCGTGCCTTGGGGACTGCTGCTCTGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000564657.2
3UTR CAA 90 bp TTGGTGACCTCCCTGGCTGCAGTCCCAGGCTCAAGCCTCATCTTTTaGGTTACAGGACTGTCAGGGTCTTCACATTTTCTTTCATTTCCA +
Preference number: 2 (lower is better)
Translates to: LVTSLAAVPGSSLIF*VTGLSGSSHFLSFP
Trigger: TGGAAATGAAAGAAAATGTGAAGACCCTGACAGTCCTGTAACCAAAAAGATGAGGCTTGAGCCTGGGACTGCAGCCAGGGAGGTCACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566445.5
3UTR-3UTR TCA 90 bp TCTTCAGAGCAGCAGTCCCCAAGGCACGAAAAAGTCTTCCTTAGAGCAGCAGTCAAAAGAATGGCTCCCTaGAGAAAGAAAGGCTGGGAA +
Preference number: 2 (lower is better)
Translates to: SSEQQSPRHEKVFLRAAVKRMAP*RKKGWE
Trigger: TTCCCAGCCTTTCTTTCTTCAGGGAGCCATTCTTTT...GACTGCTGCTCTAAGGAAGACTTTTTCGTGCCTTGGGGACTGCTGCTCTGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000564657.2
3UTR-3UTR TCA 90 bp AGATCAAAACAGAAAGCCTTTCCTGATACCTCTGAGAACAAGTCCAGGGCAGTCAGGGAGAAACTGAAGTaGTGCAGCCACAAGCCAAGG +
Preference number: 2 (lower is better)
Translates to: RSKQKAFPDTSENKSRAVREKLK*CSHKPR
Trigger: CCTTGGCTTGTGGCTGCATCACTTCAGTTTCTCCCT...GACTGCCCTGGACTTGTTCTCAGAGGTATCAGGAAAGGCTTTCTGTTTTGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564657.2
3UTR-3UTR GCA 90 bp TCTGAGGCACAGAGCAGGATCACTGAAGAATGGGAAAAGAATGGCTCCCTGAAGCAGGATGAAGGGTCCTaGTACCAGAGCAAACATTTC +
Preference number: 2 (lower is better)
Translates to: SEAQSRITEEWEKNGSLKQDEGS*YQSKHF
Trigger: GAAATGTTTGCTCTGGTAGCAGGACCCTTCATCCTG...CTTCAGGGAGCCATTCTTTTCCCATTCTTCAGTGATCCTGCTCTGTGCCTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000566445.5
3UTR-3UTR GCA 90 bp CTTGAACTCCGAAGCCTTTTGGTAAAGCAGACACATTCTGACACCTTCCAATCAGATCACAGCTGTGGATaGCTGGTGAGATTGGGCCAC +
Preference number: 2 (lower is better)
Translates to: LELRSLLVKQTHSDTFQSDHSCG*LVRLGH
Trigger: GTGGCCCAATCTCACCAGGCATCCACAGCTGTGATC...TGATTGGAAGGTGTCAGAATGTGTCTGCTTTACCAAAAGGCTTCGGAGTTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566445.5
3UTR-3UTR CCA 90 bp ACGTCTATCACTTTGGCACTACCAGGGGCTATTCTGGTGACAGTAGCCAGTCCCTCCTTTTTGAGTTCCTaGGACAAAGATGCTATCCTC +
Preference number: 2 (lower is better)
Translates to: TSITLALPGAILVTVASPSFLSS*DKDAIL
Trigger: GAGGATAGCATCTTTGTCCCAGGAACTCAAAAAGGA...GGGACTGGCTACTGTCACCAGAATAGCCCCTGGTAGTGCCAAAGTGATAGACGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566445.5
3UTR-3UTR CCA 90 bp CAAGCCTGGCCACCTTTTGGCTTTTTGGACAGAACTCTTTCAATTGTAAGTCAGCTCTGCATGGCTTCCTaGCTGTATGGGCACTTCCCA +
Preference number: 2 (lower is better)
Translates to: QAWPPFGFLDRTLSIVSQLCMAS*LYGHFP
Trigger: TGGGAAGTGCCCATACAGCCAGGAAGCCATGCAGAG...CTGACTTACAATTGAAAGAGTTCTGTCCAAAAAGCCAAAAGGTGGCCAGGCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566445.5
3UTR-3UTR TCA 90 bp CTTGCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGCTCAGAAGGCAGTTCAGGATaGAGGGTCCTGCTACCAGAG +
Preference number: 2 (lower is better)
Translates to: LALSSRFHLYYTTEMQSSEGSSG*RVLLPE
Trigger: CTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTC...TGAGCTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
3UTR-3UTR TCA 90 bp AGCAGAGAGCTACTTCAATCAAGTATAGCTTGCTCTAAGTTCCAGATTCCATCTGAAGGCAGTTCAGGATaGAGGGTCCTGCTACCAGAG +
Preference number: 2 (lower is better)
Translates to: SRELLQSSIACSKFQIPSEGSSG*RVLLPE
Trigger: CTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTC...AGATGGAATCTGGAACTTAGAGCAAGCTATACTTGATTGAAGTAGCTCTCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
3UTR-3UTR GCA 90 bp GAAACTGAAGTGATGCAGCCACAAGCCAAGGACTGCCAGGAGCCATCAGAAGCTATAAAACAGAGCTGCTaGAGAGTACTTTCAAAGCAT +
Preference number: 2 (lower is better)
Translates to: ETEVMQPQAKDCQEPSEAIKQSC*RVLSKH
Trigger: ATGCTTTGAAAGTACTCTGCAGCAGCTCTGTTTTAT...AGCTTCTGATGGCTCCTGGCAGTCCTTGGCTTGTGGCTGCATCACTTCAGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564657.2
3UTR-3UTR CCA 90 bp ACCCCAACATGGGAGCTTCCATTTTCAGTCAATCATTCAAGGTCTGAAGTTGAGAAGACTTGTCCTGCGTaGAGGAAGGCAGTTCAGGAT +
Preference number: 2 (lower is better)
Translates to: TPTWELPFSVNHSRSEVEKTCPA*RKAVQD
Trigger: ATCCTGAACTGCCTTCCTCCACGCAGGACAAGTCTT...CTCAACTTCAGACCTTGAATGATTGACTGAAAATGGAAGCTCCCATGTTGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564657.2
3UTR-3UTR CCA 90 bp GTCTCCAGCTTCTCCAGGTACACACTTGGCTCCAGTTCTATAAACGTCTATCACTCCCCACAGGGTGTATaGCTGGAGAAAAACACAAAA +
Preference number: 2 (lower is better)
Translates to: VSSFSRYTLGSSSINVYHSPQGV*LEKNTK
Trigger: TTTTGTGTTTTTCTCCAGCCATACACCCTGTGGGGA...GTGATAGACGTTTATAGAACTGGAGCCAAGTGTGTACCTGGAGAAGCTGGAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566445.5
3UTR-3UTR TCA 90 bp TCCATCTGTATTACACAACAGAGATGCAAAGCTCAGAAAGAATGTTCCCTGATTGAAGGCAGTTCAGGATaGAGGGTCCTGCTACCAGAG +
Preference number: 2 (lower is better)
Translates to: SICITQQRCKAQKECSLIEGSSG*RVLLPE
Trigger: CTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTC...AATCAGGGAACATTCTTTCTGAGCTTTGCATCTCTGTTGTGTAATACAGATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
3UTR-3UTR TCA 90 bp ATAGCTTGCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGTCTGCCTCAGCCTCCTaGGTAGTTGGGACTATAGGC +
Preference number: 2 (lower is better)
Translates to: IACSKFQIPSVLHNRDAKSASAS*VVGTIG
Trigger: GCCTATAGTCCCAACTACTCAGGAGGCTGAGGCAGA...CTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGCAAGCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564657.2
3UTR-3UTR TCA 90 bp CCCACCAACAACCTGTTTGGACTTCTAGCCTCCAGAACTGAAAGGGGATACAGTATAGCCACAAAATGCTaGAGAACCAATAAGGACCTT +
Preference number: 2 (lower is better)
Translates to: PTNNLFGLLASRTERGYSIATKC*RTNKDL
Trigger: AAGGTCCTTATTGGTTCTTCAGCATTTTGTGGCTAT...ACTGTATCCCCTTTCAGTTCTGGAGGCTAGAAGTCCAAACAGGTTGTTGGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564657.2
3UTR-3UTR TCA 90 bp TTATGTGACCCTTACAGCTCCAGATCAAAACAGAAAGCCTTTCCTGATACCTCTACAGGACAGCAAGGCTaGTCTTCAAACTCAAGCATC +
Preference number: 2 (lower is better)
Translates to: LCDPYSSRSKQKAFPDTSTGQQG*SSNSSI
Trigger: GATGCTTGAGTTTGAAGATCAGCCTTGCTGTCCTGT...AGAGGTATCAGGAAAGGCTTTCTGTTTTGATCTGGAGCTGTAAGGGTCACATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566445.5
3UTR-3UTR GCA 90 bp AGATCAAAACAGAAAGCCTTTCCTGATACCTCTGAGAACAAGTCCAGGGCAGTCCCCATAAAACAGAGCTaGTGCAGAGTACTTTCAAAG +
Preference number: 2 (lower is better)
Translates to: RSKQKAFPDTSENKSRAVPIKQS*CRVLSK
Trigger: CTTTGAAAGTACTCTGCAGCAGCTCTGTTTTATGGG...GACTGCCCTGGACTTGTTCTCAGAGGTATCAGGAAAGGCTTTCTGTTTTGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000566445.5
3UTR-3UTR CCA 90 bp AGCAGAGAGCTACTTCAATCAAGTATAGCTTGCTCTAAGTTCCAGATTCCATCTAAGACTTGTCCTGCGTaGAGGAAGGCAGTTCAGGAT +
Preference number: 2 (lower is better)
Translates to: SRELLQSSIACSKFQIPSKTCPA*RKAVQD
Trigger: ATCCTGAACTGCCTTCCTCCACGCAGGACAAGTCTT...AGATGGAATCTGGAACTTAGAGCAAGCTATACTTGATTGAAGTAGCTCTCTGCT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
3UTR-3UTR GCA 90 bp TCCATCTGTATTACACAACAGAGATGCAAAGCTCAGAAAGAATGTTCCCTGATTCAGGATGAAGGGTCCTaGTACCAGAGCAAACATTTC +
Preference number: 2 (lower is better)
Translates to: SICITQQRCKAQKECSLIQDEGS*YQSKHF
Trigger: GAAATGTTTGCTCTGGTAGCAGGACCCTTCATCCTG...AATCAGGGAACATTCTTTCTGAGCTTTGCATCTCTGTTGTGTAATACAGATGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
3UTR CAA 90 bp CAACATGGGAGCTTCCATTTTCAGTCAATCATTCAAGGTCTGAAGTaGAGTGTTAAACATTCGATGTTAAAACAGGATTGGCTGCTGGGT +
Preference number: 2 (lower is better)
Translates to: QHGSFHFQSIIQGLK*SVKHSMLKQDWLLG
Trigger: ACCCAGCAGCCAATCCTGTTTTAACATCGAATGTTTAACACTCAACTTCAGACCTTGAATGATTGACTGAAAATGGAAGCTCCCATGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564657.2
3UTR-3UTR TCA 90 bp AGAGAGCTACTTCAATCAAGTATAGCTTGCTCTAAGTTCCAGATTCCATCTGTATTCCACACTCCTTTTTaGGTTCCTGGGACAAAGATG +
Preference number: 2 (lower is better)
Translates to: RELLQSSIACSKFQIPSVFHTPF*VPGTKM
Trigger: CATCTTTGTCCCAGGAACTCAAAAAGGAGTGTGGAA...TACAGATGGAATCTGGAACTTAGAGCAAGCTATACTTGATTGAAGTAGCTCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566445.5
3UTR-3UTR CCA 90 bp AGCAATAAAACACAATGGAAGTCAGATAGTGAGGTCATTAGTGAGATGCCATTTTGGAGAAGGTACCTTTaGAAACTCCTTCTGGCTATG +
Preference number: 2 (lower is better)
Translates to: SNKTQWKSDSEVISEMPFWRRYL*KLLLAM
Trigger: CATAGCCAGAAGGAGTTTCCAAAGGTACCTTCTCCA...AAATGGCATCTCACTAATGACCTCACTATCTGACTTCCATTGTGTTTTATTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566445.5
3UTR-3UTR CCA 90 bp AGCAATAAAACACAATGGAAGTCAGATAGTGAGGTCATTAGTGAGATGCCATTTCTTATAAGTAGGCCATaGAAAGACACAGACACAGGG +
Preference number: 2 (lower is better)
Translates to: SNKTQWKSDSEVISEMPFLISRP*KDTDTG
Trigger: CCCTGTGTCTGTGTCTTTCCATGGCCTACTTATAAG...AAATGGCATCTCACTAATGACCTCACTATCTGACTTCCATTGTGTTTTATTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564657.2
3UTR-3UTR GCA 90 bp ATCAGGCATTATATTCTCATAAGGAGTGTGCAACCTAGATCCCTTGCATGCACATCTAAAATTGATGGTTaGACAACTCTGTGGATATAC +
Preference number: 2 (lower is better)
Translates to: IRHYILIRSVQPRSLACTSKIDG*TTLWIY
Trigger: GTATATCCACAGAGTTGTGCAACCATCAATTTTAGA...TGTGCATGCAAGGGATCTAGGTTGCACACTCCTTATGAGAATATAATGCCTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564657.2
3UTR CCA 72 bp ACTACAGGACATGGAGCGTGTTCTGTCTCCACGGCCTaGCTTCACTCGGAGCAGCCCCACCTGGTGAAACGC +
Preference number: 3 (lower is better)
Translates to: TTGHGACSVSTA*LHSEQPHLVKR
Trigger: GCGTTTCACCAGGTGGGGCTGCTCCGAGTGAAGCCAGGCCGTGGAGACAGAACACGCTCCATGTCCTGTAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566445.5
3UTR CCA 72 bp CCAGCTGATGGCTGCCCCACAAGGAACAAGTCGACCTaGGCTATCAGCCCTTTTTGCCTGCACCGCACTGCG +
Preference number: 3 (lower is better)
Translates to: PADGCPTRNKST*AISPFCLHRTA
Trigger: CGCAGTGCGGTGCAGGCAAAAAGGGCTGATAGCCCAGGTCGACTTGTTCCTTGTGGGGCAGCCATCAGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566445.5
3UTR GCA 72 bp GCCACTTTTCTGCTTGCCAAAACTCTGATGGTGAGCTaGTCCGTTGGTGACCTCCCTGGCTGCAGTCCCAGG +
Preference number: 3 (lower is better)
Translates to: ATFLLAKTLMVS*SVGDLPGCSPR
Trigger: CCTGGGACTGCAGCCAGGGAGGTCACCAACGGAGCAGCTCACCATCAGAGTTTTGGCAAGCAGAAAAGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566445.5
3UTR GCA 72 bp CAGGTAGATGGGCTCTTCCAGCAAGTGCATCAACAGTaGCCCTTGGCATCCGAGGACGTTCCATCGGGCCAT +
Preference number: 3 (lower is better)
Translates to: QVDGLFQQVHQQ*PLASEDVPSGH
Trigger: ATGGCCCGATGGAACGTCCTCGGATGCCAAGGGGCACTGTTGATGCACTTGCTGGAAGAGCCCATCTACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566445.5
3UTR GCA 72 bp CCCTGTGGAAAGCCATTGGCAGTAACATCCAAAGGCTaGTCAGGAACTGCACTCCAGCTGATGGCTGCCCCA +
Preference number: 3 (lower is better)
Translates to: PCGKPLAVTSKG*SGTALQLMAAP
Trigger: TGGGGCAGCCATCAGCTGGAGTGCAGTTCCTGAGCAGCCTTTGGATGTTACTGCCAATGGCTTTCCACAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566445.5
3UTR GCA 72 bp GCCATTGGCAGTAACATCCAAAGGCTGCTCAGGAACTaGACTCCAGCTGATGGCTGCCCCACAAGGAACAAG +
Preference number: 3 (lower is better)
Translates to: AIGSNIQRLLRN*TPADGCPTRNK
Trigger: CTTGTTCCTTGTGGGGCAGCCATCAGCTGGAGTGCAGTTCCTGAGCAGCCTTTGGATGTTACTGCCAATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566445.5
3UTR TCA 72 bp GACAGCAAGGCTGATCTTCAAACTCAAGCATCGGAATaGTGGAGGCATCCCCACAGGGTGTATGGCTGGAGA +
Preference number: 3 (lower is better)
Translates to: DSKADLQTQASE*WRHPHRVYGWR
Trigger: TCTCCAGCCATACACCCTGTGGGGATGCCTCCATCATTCCGATGCTTGAGTTTGAAGATCAGCCTTGCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566445.5
ENST00000568001.5
3UTR GCA 72 bp GGCGTTGAGGAACGGGAAGTGACTGCTAATGGGTTCTaGAATGGGTTGAGTGGTGTCCCCCAAAACTTCATG +
Preference number: 3 (lower is better)
Translates to: GVEEREVTANGF*NGLSGVPQNFM
Trigger: CATGAAGTTTTGGGGGACACCACTCAACCCATTGCAGAACCCATTAGCAGTCACTTCCCGTTCCTCAACGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000568510.1
3UTR CCA 72 bp ACAGTAGCCAGTCCCTCTACAGTGAGATCACAGCTGTaGATGCCTGGTGAGATTGGGCCACTTTTCTGCTTG +
Preference number: 3 (lower is better)
Translates to: TVASPSTVRSQL*MPGEIGPLFCL
Trigger: CAAGCAGAAAAGTGGCCCAATCTCACCAGGCATCCACAGCTGTGATCTCACTGTAGAGGGACTGGCTACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566445.5
3UTR-3UTR CAA 90 bp GAAACTGAAGTGATGCAGCCACAAGCCAAGGACTGCCAGGAGCCATCAGAAGCTGAACCAATAAGGACCTaGAGTAACCCCAACATGGGA +
Preference number: 3 (lower is better)
Translates to: ETEVMQPQAKDCQEPSEAEPIRT*SNPNMG
Trigger: TCCCATGTTGGGGTTACTCAAGGTCCTTATTGGTTC...AGCTTCTGATGGCTCCTGGCAGTCCTTGGCTTGTGGCTGCATCACTTCAGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564657.2
3UTR TCA 72 bp TCACGCTCCTATGAGAATCTAATGCCACTGCTGGTATaGCAGGAGGAGGAGCTACGGCAGAAATGTGAGCGA +
Preference number: 3 (lower is better)
Translates to: SRSYENLMPLLV*QEEELRQKCER
Trigger: TCGCTCACATTTCTGCCGTAGCTCCTCCTCCTGTCATACCAGCAGTGGCATTAGATTCTCATAGGAGCGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564657.2
3UTR GCA 72 bp GACCTGGGCTATCAGCCCTTTTTGCCTGCACCGCACTaGGGCTCTGTTCAAATAGTAAATCTGACTGCAGTA +
Preference number: 3 (lower is better)
Translates to: DLGYQPFLPAPH*GSVQIVNLTAV
Trigger: TACTGCAGTCAGATTTACTATTTGAACAGAGCCGCAGTGCGGTGCAGGCAAAAAGGGCTGATAGCCCAGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566445.5
3UTR GCA 72 bp GGAACAAGTCGACCTGGGCTATCAGCCCTTTTTGCCTaGACCGCACTGCGGCTCTGTTCAAATAGTAAATCT +
Preference number: 3 (lower is better)
Translates to: GTSRPGLSALFA*TALRLCSNSKS
Trigger: AGATTTACTATTTGAACAGAGCCGCAGTGCGGTGCAGGCAAAAAGGGCTGATAGCCCAGGTCGACTTGTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566445.5
3UTR-3UTR CAA 90 bp CTTGAACTCCGAAGCCTTTTGGTAAAGCAGACACATTCTGACACCTTCCAATCACATCAACAGTGCCCCTaGGCATCCGAGGACGTTCCA +
Preference number: 3 (lower is better)
Translates to: LELRSLLVKQTHSDTFQSHQQCP*ASEDVP
Trigger: TGGAACGTCCTCGGATGCCAAGGGGCACTGTTGATG...TGATTGGAAGGTGTCAGAATGTGTCTGCTTTACCAAAAGGCTTCGGAGTTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566445.5
3UTR-3UTR CAA 90 bp TGCCCTAAAGCTTTTAGAGGAAGCAGAAGCCCCACCAACAACCTGTTTGGACTTGGGTCTATTGCTGATTaGCTGCAGGGCCTTTTGGCT +
Preference number: 3 (lower is better)
Translates to: CPKAFRGSRSPTNNLFGLGSIAD*LQGLLA
Trigger: AGCCAAAAGGCCCTGCAGCAAATCAGCAATAGACCC...AAGTCCAAACAGGTTGTTGGTGGGGCTTCTGCTTCCTCTAAAAGCTTTAGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000564657.2
3UTR CCA 72 bp GCTTTCCGGAGTCTCCAGCTTCTCCAGGTACACACTTaGCTCCAGTTCTATAAACGTCTATCACTTTGGCAC +
Preference number: 3 (lower is better)
Translates to: AFRSLQLLQVHT*LQFYKRLSLWH
Trigger: GTGCCAAAGTGATAGACGTTTATAGAACTGGAGCCAAGTGTGTACCTGGAGAAGCTGGAGACTCCGGAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566445.5
3UTR-3UTR CAA 90 bp CTTTGTTGTTCCCTGTGGAAAGCCATTGGCAGTAACATCCAAAGGCTGCTCAGGTCAAGCCTCATCTTTTaGGTTACAGGACTGTCAGGG +
Preference number: 3 (lower is better)
Translates to: LCCSLWKAIGSNIQRLLRSSLIF*VTGLSG
Trigger: CCCTGACAGTCCTGTAACCAAAAAGATGAGGCTTGA...CCTGAGCAGCCTTTGGATGTTACTGCCAATGGCTTTCCACAGGGAACAACAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566445.5
3UTR GCA 72 bp GTTTCCACACTCCTTTTTGAGTTCCTGGGACAAAGATaGTATCCTCTTTCAGGGTGGCTGCCAACTGGAGTT +
Preference number: 3 (lower is better)
Translates to: VSTLLFEFLGQR*YPLSGWLPTGV
Trigger: AACTCCAGTTGGCAGCCACCCTGAAAGAGGATAGCATCTTTGTCCCAGGAACTCAAAAAGGAGTGTGGAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566445.5
3UTR-3UTR CAA 90 bp CACAGACACAGGGAAGAAGGCCATGCGAGACACAGACACAGAAGGCCATGTGAAAGTGTTACTAGATCTTaGATTCTCTTGGCTGTTTCC +
Preference number: 3 (lower is better)
Translates to: HRHREEGHARHRHRRPCESVTRS*ILLAVS
Trigger: GGAAACAGCCAAGAGAATCAAAGATCTAGTAACACT...TTCACATGGCCTTCTGTGTCTGTGTCTCGCATGGCCTTCTTCCCTGTGTCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564657.2
3UTR GCA 72 bp GATGAAACTTCAAGTGCTCACCTGTTACTTATCTCCTaGTGTGTGACCTTGTTCCTGACAGGCCACAGACAA +
Preference number: 3 (lower is better)
Translates to: DETSSAHLLLIS*CVTLFLTGHRQ
Trigger: TTGTCTGTGGCCTGTCAGGAACAAGGTCACACAGCAGGAGATAAGTAACAGGTGAGCACTTGAAGTTTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564657.2
3UTR CCA 72 bp GGCCACTTGTCCCTTGCAATTCTGCTTAGCAGCTTCTaGAATGATCTGAAGAGTTCCACTTTGCTGATTTGG +
Preference number: 3 (lower is better)
Translates to: GHLSLAILLSSF*NDLKSSTLLIW
Trigger: CCAAATCAGCAAAGTGGAACTCTTCAGATCATTCCAGAAGCTGCTAAGCAGAATTGCAAGGGACAAGTGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566445.5
3UTR-3UTR CAA 90 bp AGATCAAAACAGAAAGCCTTTCCTGATACCTCTGAGAACAAGTCCAGGGCAGTCGAACTCCGAAGCCTTTaGGTAAAGCAGACACATTCT +
Preference number: 3 (lower is better)
Translates to: RSKQKAFPDTSENKSRAVELRSL*VKQTHS
Trigger: AGAATGTGTCTGCTTTACCAAAAGGCTTCGGAGTTC...GACTGCCCTGGACTTGTTCTCAGAGGTATCAGGAAAGGCTTTCTGTTTTGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566445.5
3UTR-3UTR CAA 90 bp GCTTGCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGCTCGTGGAGAAGGTACCTTaGGAAACTCCTTCTGGCTAT +
Preference number: 3 (lower is better)
Translates to: ACSKFQIPSVLHNRDAKLVEKVP*ETPSGY
Trigger: ATAGCCAGAAGGAGTTTCCAAAGGTACCTTCTCCAC...GAGCTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGCAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566445.5
3UTR CCA 72 bp AAGTTGAGTGTTAAACATTCGATGTTAAAACAGGATTaGCTGCTGGGTCTATTGCTGATTTGCTGCAGGGCC +
Preference number: 3 (lower is better)
Translates to: KLSVKHSMLKQD*LLGLLLICCRA
Trigger: GGCCCTGCAGCAAATCAGCAATAGACCCAGCAGCCAATCCTGTTTTAACATCGAATGTTTAACACTCAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564657.2
3UTR GCA 72 bp CACAATGGAAGTCAGATAGTGAGGTCATTAGTGAGATaGCATTTTAGCAGAGAGCTACTTCAATCAAGTATA +
Preference number: 3 (lower is better)
Translates to: HNGSQIVRSLVR*HFSRELLQSSI
Trigger: TATACTTGATTGAAGTAGCTCTCTGCTAAAATGGCATCTCACTAATGACCTCACTATCTGACTTCCATTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000566445.5
CDS-3UTR GCA 90 bp ACAGGGAAGAAGGCCATGCGAGACACAGACACAGAAGGCCATGTGAAGACGGAGATTGGGTCCTGCGGCTaGCAGGCCAGAGGCCCCGCG +
Preference number: 4 (lower is better)
Translates to: TGKKAMRDTDTEGHVKTEIGSCG*QARGPA
Trigger: CGCGGGGCCTCTGGCCTGGCAGCCGCAGGACCCAAT...CTCCGTCTTCACATGGCCTTCTGTGTCTGTGTCTCGCATGGCCTTCTTCCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR TCA 90 bp CCCCACAAGGAACAAGTCGACCTGGGCTATCAGCCCTTTTTGCCTGCACCGCACAGCAGCCCCACCTGGTaGAACGCAGCACCCGGCTTT +
Preference number: 4 (lower is better)
Translates to: PHKEQVDLGYQPFLPAPHSSPTW*NAAPGF
Trigger: AAAGCCGGGTGCTGCGTTTCACCAGGTGGGGCTGCT...GTGCGGTGCAGGCAAAAAGGGCTGATAGCCCAGGTCGACTTGTTCCTTGTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR CCA 90 bp ACAGACACAGGGAAGAAGGCCATGCGAGACACAGACACAGAAGGCCATGTGAAGGCCGCTGGAGAAGCCTaGGTGGGACCCCGAGTCGGC +
Preference number: 4 (lower is better)
Translates to: TDTGKKAMRDTDTEGHVKAAGEA*VGPRVG
Trigger: GCCGACTCGGGGTCCCACCCAGGCTTCTCCAGCGGC...CTTCACATGGCCTTCTGTGTCTGTGTCTCGCATGGCCTTCTTCCCTGTGTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR TCA 90 bp CCTGCGTGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCAAACATAACAGCGTGAGCGCCTaGTCCATTGGGTCCTGCGGC +
Preference number: 4 (lower is better)
Translates to: PAWRKAVQDEGSCYQSKHNSVSA*SIGSCG
Trigger: GCCGCAGGACCCAATGGATCAGGCGCTCACGCTGTT...ATGTTTGCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCACGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR CCA 90 bp CCTGCGTGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCAAACATTCTGTCTCCACGGCCTaGCTTCACTCGGAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: PAWRKAVQDEGSCYQSKHSVSTA*LHSEQP
Trigger: GGGCTGCTCCGAGTGAAGCCAGGCCGTGGAGACAGA...ATGTTTGCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCACGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR TCA 90 bp GTGCATCAACAGTGCCCCTTGGCATCCGAGGACGTTCCATCGGGCCATCTTGTCGCTGTGGATGCCTGGTaGGATTGGGCCACTTTTCTG +
Preference number: 4 (lower is better)
Translates to: VHQQCPLASEDVPSGHLVAVDAW*DWATFL
Trigger: CAGAAAAGTGGCCCAATCTCACCAGGCATCCACAGC...GACAAGATGGCCCGATGGAACGTCCTCGGATGCCAAGGGGCACTGTTGATGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR TCA 90 bp GAGGAACGGGAAGTGACTGCTAATGGGTTCTGCAATGGGTTGAGTGGTGTCCCCGAGCGCCTTCCCACGTaGAACGCGTCCCGGAAGATA +
Preference number: 4 (lower is better)
Translates to: EEREVTANGFCNGLSGVPERLPT*NASRKI
Trigger: TATCTTCCGGGACGCGTTTCACGTGGGAAGGCGCTC...GGGGACACCACTCAACCCATTGCAGAACCCATTAGCAGTCACTTCCCGTTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR GCA 90 bp CGTGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCAAACATTTCCGGTGACCTCCCTGGCTaGAGTCCCAGGCTCAAGCCT +
Preference number: 4 (lower is better)
Translates to: RGGRQFRMKGPATRANISGDLPG*SPRLKP
Trigger: AGGCTTGAGCCTGGGACTGCAGCCAGGGAGGTCACC...GGAAATGTTTGCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR GCA 90 bp ATCTTGTCACTACAGGACATGGAGCGTGTTCTGTCTCCACGGCCTGGCTTCACTGGTGACCTCCCTGGCTaGAGTCCCAGGCTCAAGCCT +
Preference number: 4 (lower is better)
Translates to: ILSLQDMERVLSPRPGFTGDLPG*SPRLKP
Trigger: AGGCTTGAGCCTGGGACTGCAGCCAGGGAGGTCACC...AGTGAAGCCAGGCCGTGGAGACAGAACACGCTCCATGTCCTGTAGTGACAAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR TCA 90 bp AGGGAAGAAGGCCATGCGAGACACAGACACAGAAGGCCATGTGAAGACGGAGGGCCCAATGACCACAGCTaGCAGGTAGATGGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: REEGHARHRHRRPCEDGGPNDHS*QVDGLF
Trigger: GAAGAGCCCATCTACCTGTCAGCTGTGGTCATTGGG...CCCTCCGTCTTCACATGGCCTTCTGTGTCTGTGTCTCGCATGGCCTTCTTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR TCA 90 bp CCTGCGTGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCAAACATGAACTGCACTCCAGCTaGTGGCTGCCCCACAAGGAA +
Preference number: 4 (lower is better)
Translates to: PAWRKAVQDEGSCYQSKHELHSS*WLPHKE
Trigger: TTCCTTGTGGGGCAGCCATCAGCTGGAGTGCAGTTC...ATGTTTGCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCACGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR TCA 90 bp ACTTGTCCTGCGTGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCGAAGGCAGTTCAGGATaGAGGGTCCTGCTACCAGAG +
Preference number: 4 (lower is better)
Translates to: TCPAWRKAVQDEGSCYQSEGSSG*RVLLPE
Trigger: CTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTC...GCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCACGCAGGACAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR TCA 90 bp CCTGCGTGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCAAACATGCAGTGAGAACAGCGTaGGCGCCTGATCCATTGGGT +
Preference number: 4 (lower is better)
Translates to: PAWRKAVQDEGSCYQSKHAVRTA*APDPLG
Trigger: ACCCAATGGATCAGGCGCTCACGCTGTTCTCACTGC...ATGTTTGCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCACGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR TCA 90 bp CACAGGGAAGAAGGCCATGCGAGACACAGACACAGAAGGCCATGTGAAGACGGAACTGAAGCCATGCAGTaGGAACAGCGTGAGCGCCTG +
Preference number: 4 (lower is better)
Translates to: HREEGHARHRHRRPCEDGTEAMQ*EQRERL
Trigger: CAGGCGCTCACGCTGTTCTCACTGCATGGCTTCAGT...TCCGTCTTCACATGGCCTTCTGTGTCTGTGTCTCGCATGGCCTTCTTCCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR TCA 90 bp GAGGAACGGGAAGTGACTGCTAATGGGTTCTGCAATGGGTTGAGTGGTGTCCCCGGAGCCATCAGAAGCTaGGGGAGTGTGGCCACTTGT +
Preference number: 4 (lower is better)
Translates to: EEREVTANGFCNGLSGVPGAIRS*GSVATC
Trigger: ACAAGTGGCCACACTCCCTCAGCTTCTGATGGCTCC...GGGGACACCACTCAACCCATTGCAGAACCCATTAGCAGTCACTTCCCGTTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568510.1
CDS-3UTR TCA 90 bp CCTGCGTGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCAAACATATGCCACTGCTGGTATaGCAGGAGGAGGAGCTACGG +
Preference number: 4 (lower is better)
Translates to: PAWRKAVQDEGSCYQSKHMPLLV*QEEELR
Trigger: CCGTAGCTCCTCCTCCTGTCATACCAGCAGTGGCAT...ATGTTTGCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCACGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR TCA 90 bp CCCCACAAGGAACAAGTCGACCTGGGCTATCAGCCCTTTTTGCCTGCACCGCACCAGCATGGCTATCATTaGGGATGTCTCCTGCGGCAA +
Preference number: 4 (lower is better)
Translates to: PHKEQVDLGYQPFLPAPHQHGYH*GCLLRQ
Trigger: TTGCCGCAGGAGACATCCTCAATGATAGCCATGCTG...GTGCGGTGCAGGCAAAAAGGGCTGATAGCCCAGGTCGACTTGTTCCTTGTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR GCA 90 bp CCTGCGTGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCAAACATTCAGCCCTTTTTGCCTaGACCGCACTGCGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: PAWRKAVQDEGSCYQSKHSALFA*TALRLC
Trigger: ACAGAGCCGCAGTGCGGTGCAGGCAAAAAGGGCTGA...ATGTTTGCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCACGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR GCA 90 bp GAAGAAGGCCATGCGAGACACAGACACAGAAGGCCATGTGAAGACGGAGGGAGAACGATCCTGGCTCACTaGAACCTCCACCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: EEGHARHRHRRPCEDGGRTILAH*NLHLLG
Trigger: ACCCAGGAGGTGGAGGTTGCAGTGAGCCAGGATCGT...TCTCCCTCCGTCTTCACATGGCCTTCTGTGTCTGTGTCTCGCATGGCCTTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR TCA 90 bp CACAGGGAAGAAGGCCATGCGAGACACAGACACAGAAGGCCATGTGAAGACGGAACTCAAGCATCGGAATaGTGGAGGCATCCCCACAGG +
Preference number: 4 (lower is better)
Translates to: HREEGHARHRHRRPCEDGTQASE*WRHPHR
Trigger: CCTGTGGGGATGCCTCCATCATTCCGATGCTTGAGT...TCCGTCTTCACATGGCCTTCTGTGTCTGTGTCTCGCATGGCCTTCTTCCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR TCA 90 bp GAAACTGAAGTGATGCAGCCACAAGCCAAGGACTGCCAGGAGCCATCAGAAGCTGAACTGCACTCCAGCTaGTGGCTGCCCCACAAGGAA +
Preference number: 4 (lower is better)
Translates to: ETEVMQPQAKDCQEPSEAELHSS*WLPHKE
Trigger: TTCCTTGTGGGGCAGCCATCAGCTGGAGTGCAGTTC...AGCTTCTGATGGCTCCTGGCAGTCCTTGGCTTGTGGCTGCATCACTTCAGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR TCA 90 bp GGCTTCCTGGTAAGAGGACGCAGCCTCCTTGTACTCCTGGTAGGTATCCAGCTTGAAGGCAGTTCAGGATaGAGGGTCCTGCTACCAGAG +
Preference number: 4 (lower is better)
Translates to: GFLVRGRSLLVLLVGIQLEGSSG*RVLLPE
Trigger: CTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTC...AAGCTGGATACCTACCAGGAGTACAAGGAGGCTGCGTCCTCTTACCAGGAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR TCA 90 bp GAAGAAGGCCATGCGAGACACAGACACAGAAGGCCATGTGAAGACGGAGGGAGATGCCAGGCAAGGCACTaGAGCCATGCAGTGAGAACA +
Preference number: 4 (lower is better)
Translates to: EEGHARHRHRRPCEDGGRCQARH*SHAVRT
Trigger: TGTTCTCACTGCATGGCTTCAGTGCCTTGCCTGGCA...TCTCCCTCCGTCTTCACATGGCCTTCTGTGTCTGTGTCTCGCATGGCCTTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR GCA 90 bp GGCTTCCTGGTAAGAGGACGCAGCCTCCTTGTACTCCTGGTAGGTATCCAGCTTACTCTGATGGTGAGCTaGTCCGTTGGTGACCTCCCT +
Preference number: 4 (lower is better)
Translates to: GFLVRGRSLLVLLVGIQLTLMVS*SVGDLP
Trigger: AGGGAGGTCACCAACGGAGCAGCTCACCATCAGAGT...AAGCTGGATACCTACCAGGAGTACAAGGAGGCTGCGTCCTCTTACCAGGAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR GCA 90 bp CACAGGGAAGAAGGCCATGCGAGACACAGACACAGAAGGCCATGTGAAGACGGACAAGTGCATCAACAGTaGCCCTTGGCATCCGAGGAC +
Preference number: 4 (lower is better)
Translates to: HREEGHARHRHRRPCEDGQVHQQ*PLASED
Trigger: GTCCTCGGATGCCAAGGGGCACTGTTGATGCACTTG...TCCGTCTTCACATGGCCTTCTGTGTCTGTGTCTCGCATGGCCTTCTTCCCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR GCA 90 bp ACAGACACAGGGAAGAAGGCCATGCGAGACACAGACACAGAAGGCCATGTGAAGCCTGCTTCCGGAGTGTaGTCCAGGCTTCCTGGTAAG +
Preference number: 4 (lower is better)
Translates to: TDTGKKAMRDTDTEGHVKPASGV*SRLPGK
Trigger: CTTACCAGGAAGCCTGGAGCACACTCCGGAAGCAGG...CTTCACATGGCCTTCTGTGTCTGTGTCTCGCATGGCCTTCTTCCCTGTGTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR GCA 90 bp GAAGAAGGCCATGCGAGACACAGACACAGAAGGCCATGTGAAGACGGAGGGAGACCACAAGCCAAGGACTaGCAGGAGCCATCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: EEGHARHRHRRPCEDGGRPQAKD*QEPSEA
Trigger: AGCTTCTGATGGCTCCTGGCAGTCCTTGGCTTGTGG...TCTCCCTCCGTCTTCACATGGCCTTCTGTGTCTGTGTCTCGCATGGCCTTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000568510.1
CDS-3UTR GCA 90 bp GAAGAAGGCCATGCGAGACACAGACACAGAAGGCCATGTGAAGACGGAGGGAGATCACCCAGGCTGGAGTaGAGCGGTACGATCTTTGCT +
Preference number: 4 (lower is better)
Translates to: EEGHARHRHRRPCEDGGRSPRLE*SGTIFA
Trigger: AGCAAAGATCGTACCGCTGCACTCCAGCCTGGGTGA...TCTCCCTCCGTCTTCACATGGCCTTCTGTGTCTGTGTCTCGCATGGCCTTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR GCA 90 bp AGACACAGGGAAGAAGGCCATGCGAGACACAGACACAGAAGGCCATGTGAAGACTCACCCAGGCTAGAGTaGAGTGGCACGATCCTGGCT +
Preference number: 4 (lower is better)
Translates to: RHREEGHARHRHRRPCEDSPRLE*SGTILA
Trigger: AGCCAGGATCGTGCCACTGCACTCTAGCCTGGGTGA...GTCTTCACATGGCCTTCTGTGTCTGTGTCTCGCATGGCCTTCTTCCCTGTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR CCA 90 bp ACTTGTCCTGCGTGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCCATCCGCGGTCCACATaGTCTGAGCTGGTATTGAGA +
Preference number: 4 (lower is better)
Translates to: TCPAWRKAVQDEGSCYQSHPRST*SELVLR
Trigger: TCTCAATACCAGCTCAGACCATGTGGACCGCGGATG...GCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCACGCAGGACAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR TCA 90 bp GAGGAACGGGAAGTGACTGCTAATGGGTTCTGCAATGGGTTGAGTGGTGTCCCCGGTTCTGCAATGGGTTaGGTGGTGTCCCCCAAAACT +
Preference number: 4 (lower is better)
Translates to: EEREVTANGFCNGLSGVPGSAMG*VVSPKT
Trigger: AGTTTTGGGGGACACCACTCAACCCATTGCAGAACC...GGGGACACCACTCAACCCATTGCAGAACCCATTAGCAGTCACTTCCCGTTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000568510.1
CDS-3UTR TCA 90 bp ACAGGGAAGAAGGCCATGCGAGACACAGACACAGAAGGCCATGTGAAGACGGAGGGTTCTGCAATGGGTTaGGTGGTGTCCCCCAAAACT +
Preference number: 4 (lower is better)
Translates to: TGKKAMRDTDTEGHVKTEGSAMG*VVSPKT
Trigger: AGTTTTGGGGGACACCACTCAACCCATTGCAGAACC...CTCCGTCTTCACATGGCCTTCTGTGTCTGTGTCTCGCATGGCCTTCTTCCCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000568510.1
CDS-3UTR TCA 90 bp GTGCATCAACAGTGCCCCTTGGCATCCGAGGACGTTCCATCGGGCCATCTTGTCAGTCCCATGATTATGTaGCCCTTACAGCTCCAGATC +
Preference number: 4 (lower is better)
Translates to: VHQQCPLASEDVPSGHLVSPMIM*PLQLQI
Trigger: GATCTGGAGCTGTAAGGGTCACATAATCATGGGACT...GACAAGATGGCCCGATGGAACGTCCTCGGATGCCAAGGGGCACTGTTGATGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR GCA 90 bp GTAGGCCATGGAAAGACACAGACACAGGGAAGAAGGCCATGCGAGACACAGACAACTCTGATGGTGAGCTaGTCCGTTGGTGACCTCCCT +
Preference number: 4 (lower is better)
Translates to: VGHGKTQTQGRRPCETQTTLMVS*SVGDLP
Trigger: AGGGAGGTCACCAACGGAGCAGCTCACCATCAGAGT...TGTCTGTGTCTCGCATGGCCTTCTTCCCTGTGTCTGTGTCTTTCCATGGCCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR GCA 90 bp CGTGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCAAACATTTCCGATCACAGCTGTGGATaGCTGGTGAGATTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: RGGRQFRMKGPATRANISDHSCG*LVRLGH
Trigger: GTGGCCCAATCTCACCAGGCATCCACAGCTGTGATC...GGAAATGTTTGCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR GCA 90 bp CACAGACACAGGGAAGAAGGCCATGCGAGACACAGACACAGAAGGCCATGTGAAGATCACAGCTGTGGATaGCTGGTGAGATTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: HRHREEGHARHRHRRPCEDHSCG*LVRLGH
Trigger: GTGGCCCAATCTCACCAGGCATCCACAGCTGTGATC...TTCACATGGCCTTCTGTGTCTGTGTCTCGCATGGCCTTCTTCCCTGTGTCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR GCA 90 bp AGACACAGGGAAGAAGGCCATGCGAGACACAGACACAGAAGGCCATGTGAAGACGGCTCTTCCAGCAAGTaGATCAACAGTGCCCCTTGG +
Preference number: 4 (lower is better)
Translates to: RHREEGHARHRHRRPCEDGSSSK*INSAPW
Trigger: CCAAGGGGCACTGTTGATGCACTTGCTGGAAGAGCC...GTCTTCACATGGCCTTCTGTGTCTGTGTCTCGCATGGCCTTCTTCCCTGTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR GCA 90 bp ACTTGTCCTGCGTGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCCCAATCAGTGCTCTCTaGATGGCTTCCTGGCTGTAT +
Preference number: 4 (lower is better)
Translates to: TCPAWRKAVQDEGSCYQSPISAL*MASWLY
Trigger: ATACAGCCAGGAAGCCATGCAGAGAGCACTGATTGG...GCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCACGCAGGACAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR GCA 90 bp AGACACAGGGAAGAAGGCCATGCGAGACACAGACACAGAAGGCCATGTGAAGACCAGGATCCAAACACCTaGTTCCGGAGTGTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: RHREEGHARHRHRRPCEDQDPNT*FRSVLQ
Trigger: CTGGAGCACACTCCGGAAGCAGGTGTTTGGATCCTG...GTCTTCACATGGCCTTCTGTGTCTGTGTCTCGCATGGCCTTCTTCCCTGTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR GCA 90 bp CCTGCGTGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCAAACATAGGTGTGCGCCACCATaGCCGGCTAGTTTTTGCATT +
Preference number: 4 (lower is better)
Translates to: PAWRKAVQDEGSCYQSKHRCAPP*PASFCI
Trigger: AATGCAAAAACTAGCCGGGCATGGTGGCGCACACCT...ATGTTTGCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCACGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp CTTGTCCTGCGTGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCATATCCTCTTTCAGGGTaGCTGCCAACTGGAGTTGGT +
Preference number: 4 (lower is better)
Translates to: LVLRGGRQFRMKGPATRAYPLSG*LPTGVG
Trigger: ACCAACTCCAGTTGGCAGCCACCCTGAAAGAGGATA...TGCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCACGCAGGACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp GCAAGGCTGATCTTCAAACTCAAGCATCGGAATGATGGAGGCATCCCCACAGGGCTCTGCATGGCTTCCTaGCTGTATGGGCACTTCCCA +
Preference number: 4 (lower is better)
Translates to: ARLIFKLKHRNDGGIPTGLCMAS*LYGHFP
Trigger: TGGGAAGTGCCCATACAGCCAGGAAGCCATGCAGAG...CCCTGTGGGGATGCCTCCATCATTCCGATGCTTGAGTTTGAAGATCAGCCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR CCA 90 bp ACTTGTCCTGCGTGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCAGGAACAAGTCGACCTaGGCTATCAGCCCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: TCPAWRKAVQDEGSCYQSRNKST*AISPFC
Trigger: GCAAAAAGGGCTGATAGCCCAGGTCGACTTGTTCCT...GCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCACGCAGGACAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp CTTGTCCTGCGTGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCAAGGAACAAGTCGACCTaGGCTATCAGCCCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: LVLRGGRQFRMKGPATRARNKST*AISPFC
Trigger: GCAAAAAGGGCTGATAGCCCAGGTCGACTTGTTCCT...TGCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCACGCAGGACAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp GAAGAAGGCCATGCGAGACACAGACACAGAAGGCCATGTGAAGACGGAGGGAGAGAAGCTGAGGGAGTGTaGCCACTTGTCCCTTGCAAT +
Preference number: 4 (lower is better)
Translates to: EEGHARHRHRRPCEDGGREAEGV*PLVPCN
Trigger: ATTGCAAGGGACAAGTGGCCACACTCCCTCAGCTTC...TCTCCCTCCGTCTTCACATGGCCTTCTGTGTCTGTGTCTCGCATGGCCTTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568510.1
CDS-3UTR CCA 90 bp CACAGGGAAGAAGGCCATGCGAGACACAGACACAGAAGGCCATGTGAAGACGGACTGAGCCACCAAGCCTaGCCACCTTTTGGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: HREEGHARHRHRRPCEDGLSHQA*PPFGFL
Trigger: CAAAAAGCCAAAAGGTGGCCAGGCTTGGTGGCTCAG...TCCGTCTTCACATGGCCTTCTGTGTCTGTGTCTCGCATGGCCTTCTTCCCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR TCA 90 bp TGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCAAACATTTCCTTGAACTGCACTCCAGCTaGTGGCTGCCCCACAAGGAA +
Preference number: 4 (lower is better)
Translates to: WRKAVQDEGSCYQSKHFLELHSS*WLPHKE
Trigger: TTCCTTGTGGGGCAGCCATCAGCTGGAGTGCAGTTC...AAGGAAATGTTTGCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR TCA 90 bp CACAGACACAGGGAAGAAGGCCATGCGAGACACAGACACAGAAGGCCATGTGAAAGGGAGAAACTGAAGTaGTGCAGCCACAAGCCAAGG +
Preference number: 4 (lower is better)
Translates to: HRHREEGHARHRHRRPCEREKLK*CSHKPR
Trigger: CCTTGGCTTGTGGCTGCATCACTTCAGTTTCTCCCT...TTCACATGGCCTTCTGTGTCTGTGTCTCGCATGGCCTTCTTCCCTGTGTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000568510.1
CDS-3UTR TCA 90 bp CCTGCGTGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCAAACATTGCTGGGTCTATTGCTaGTTTGCTGCAGGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: PAWRKAVQDEGSCYQSKHCWVYC*FAAGPF
Trigger: AAAAGGCCCTGCAGCAAATCAGCAATAGACCCAGCA...ATGTTTGCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCACGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR GCA 90 bp AGATCAAAACAGAAAGCCTTTCCTGATACCTCTGAGAACAAGTCCAGGGCAGTCGGTGACCTCCCTGGCTaGAGTCCCAGGCTCAAGCCT +
Preference number: 4 (lower is better)
Translates to: RSKQKAFPDTSENKSRAVGDLPG*SPRLKP
Trigger: AGGCTTGAGCCTGGGACTGCAGCCAGGGAGGTCACC...GACTGCCCTGGACTTGTTCTCAGAGGTATCAGGAAAGGCTTTCTGTTTTGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000566445.5
CDS-3UTR GCA 90 bp ACTTGTCCTGCGTGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCGGCCACTTTTCTGCTTaGCAAAACTCTGATGGTGAG +
Preference number: 4 (lower is better)
Translates to: TCPAWRKAVQDEGSCYQSGHFSA*QNSDGE
Trigger: CTCACCATCAGAGTTTTGGCAAGCAGAAAAGTGGCC...GCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCACGCAGGACAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR GCA 90 bp CCTGCGTGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCAAACATCCAATCAGTGCTCTCTaGATGGCTTCCTGGCTGTAT +
Preference number: 4 (lower is better)
Translates to: PAWRKAVQDEGSCYQSKHPISAL*MASWLY
Trigger: ATACAGCCAGGAAGCCATGCAGAGAGCACTGATTGG...ATGTTTGCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCACGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR GCA 90 bp GAGGAACGGGAAGTGACTGCTAATGGGTTCTGCAATGGGTTGAGTGGTGTCCCCACACCTTCCAATCAGTaGTCTCTGCATGGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: EEREVTANGFCNGLSGVPTPSNQ*SLHGFL
Trigger: CAGGAAGCCATGCAGAGAGCACTGATTGGAAGGTGT...GGGGACACCACTCAACCCATTGCAGAACCCATTAGCAGTCACTTCCCGTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR GCA 90 bp ACAGCAAGGCTGATCTTCAAACTCAAGCATCGGAATGATGGAGGCATCCCCACATCAGCCCTTTTTGCCTaGACCGCACTGCGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: TARLIFKLKHRNDGGIPTSALFA*TALRLC
Trigger: ACAGAGCCGCAGTGCGGTGCAGGCAAAAAGGGCTGA...TGTGGGGATGCCTCCATCATTCCGATGCTTGAGTTTGAAGATCAGCCTTGCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR GCA 90 bp CCTGCGTGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCAAACATGTAACATCCAAAGGCTaGTCAGGAACTGCACTCCAG +
Preference number: 4 (lower is better)
Translates to: PAWRKAVQDEGSCYQSKHVTSKG*SGTALQ
Trigger: CTGGAGTGCAGTTCCTGAGCAGCCTTTGGATGTTAC...ATGTTTGCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCACGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR GCA 90 bp ACAGGGAAGAAGGCCATGCGAGACACAGACACAGAAGGCCATGTGAAGACGGAGGTAACATCCAAAGGCTaGTCAGGAACTGCACTCCAG +
Preference number: 4 (lower is better)
Translates to: TGKKAMRDTDTEGHVKTEVTSKG*SGTALQ
Trigger: CTGGAGTGCAGTTCCTGAGCAGCCTTTGGATGTTAC...CTCCGTCTTCACATGGCCTTCTGTGTCTGTGTCTCGCATGGCCTTCTTCCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR GCA 90 bp TGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCAAACATTTCCTTCCTGCTTCCGGAGTGTaGTCCAGGCTTCCTGGTAAG +
Preference number: 4 (lower is better)
Translates to: WRKAVQDEGSCYQSKHFLPASGV*SRLPGK
Trigger: CTTACCAGGAAGCCTGGAGCACACTCCGGAAGCAGG...AAGGAAATGTTTGCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR GCA 90 bp ACTTGTCCTGCGTGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCCAGGATGAAGGGTCCTaGTACCAGAGCAAACATTTC +
Preference number: 4 (lower is better)
Translates to: TCPAWRKAVQDEGSCYQSQDEGS*YQSKHF
Trigger: GAAATGTTTGCTCTGGTAGCAGGACCCTTCATCCTG...GCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCACGCAGGACAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR GCA 90 bp CACAGGGAAGAAGGCCATGCGAGACACAGACACAGAAGGCCATGTGAAGACGGAAAAAGGCTTCAGCGATaGTTGGAGGAAGGGACTCTG +
Preference number: 4 (lower is better)
Translates to: HREEGHARHRHRRPCEDGKRLQR*LEEGTL
Trigger: CAGAGTCCCTTCCTCCAAGCATCGCTGAAGCCTTTT...TCCGTCTTCACATGGCCTTCTGTGTCTGTGTCTCGCATGGCCTTCTTCCCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR GCA 90 bp TCTTCAGAGCAGCAGTCCCCAAGGCACGAAAAAGTCTTCCTTAGAGCAGCAGTCCCACAAGCCAAGGACTaGCAGGAGCCATCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: SSEQQSPRHEKVFLRAAVPQAKD*QEPSEA
Trigger: AGCTTCTGATGGCTCCTGGCAGTCCTTGGCTTGTGG...GACTGCTGCTCTAAGGAAGACTTTTTCGTGCCTTGGGGACTGCTGCTCTGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR GCA 90 bp CTTGTCCTGCGTGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCAATTGAGGATGTCTCCTaGGGCAAAGATAGGACACCA +
Preference number: 4 (lower is better)
Translates to: LVLRGGRQFRMKGPATRAIEDVS*GKDRTP
Trigger: TGGTGTCCTATCTTTGCCGCAGGAGACATCCTCAAT...TGCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCACGCAGGACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR CCA 90 bp CACAGACACAGGGAAGAAGGCCATGCGAGACACAGACACAGAAGGCCATGTGAACATCCGCGGTCCACATaGTCTGAGCTGGTATTGAGA +
Preference number: 4 (lower is better)
Translates to: HRHREEGHARHRHRRPCEHPRST*SELVLR
Trigger: TCTCAATACCAGCTCAGACCATGTGGACCGCGGATG...TTCACATGGCCTTCTGTGTCTGTGTCTCGCATGGCCTTCTTCCCTGTGTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR CCA 90 bp AGGGAAGAAGGCCATGCGAGACACAGACACAGAAGGCCATGTGAAGACGGAGGGGCCAACTGGAGTTGGTaGAGAAGGTACCTTTGGAAA +
Preference number: 4 (lower is better)
Translates to: REEGHARHRHRRPCEDGGANWSW*RRYLWK
Trigger: TTTCCAAAGGTACCTTCTCCACCAACTCCAGTTGGC...CCCTCCGTCTTCACATGGCCTTCTGTGTCTGTGTCTCGCATGGCCTTCTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR CCA 90 bp TCTTCAGAGCAGCAGTCCCCAAGGCACGAAAAAGTCTTCCTTAGAGCAGCAGTCGGCTTCCTGGCTGTATaGGCACTTCCCAATGACCAC +
Preference number: 4 (lower is better)
Translates to: SSEQQSPRHEKVFLRAAVGFLAV*ALPNDH
Trigger: GTGGTCATTGGGAAGTGCCCATACAGCCAGGAAGCC...GACTGCTGCTCTAAGGAAGACTTTTTCGTGCCTTGGGGACTGCTGCTCTGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR CCA 90 bp CTCAAGCATCGGAATGATGGAGGCATCCCCACAGGGTGTATGGCTGGAGAAAAAGGCTTCCTGGCTGTATaGGCACTTCCCAATGACCAC +
Preference number: 4 (lower is better)
Translates to: LKHRNDGGIPTGCMAGEKGFLAV*ALPNDH
Trigger: GTGGTCATTGGGAAGTGCCCATACAGCCAGGAAGCC...TTTTTCTCCAGCCATACACCCTGTGGGGATGCCTCCATCATTCCGATGCTTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR CCA 90 bp GAAGAAGGCCATGCGAGACACAGACACAGAAGGCCATGTGAAGACGGAGGGAGACTGGTGATAATCCGGTaGGTTTCTGATCCAGGATCC +
Preference number: 4 (lower is better)
Translates to: EEGHARHRHRRPCEDGGRLVIIR*VSDPGS
Trigger: GGATCCTGGATCAGAAACCCACCGGATTATCACCAG...TCTCCCTCCGTCTTCACATGGCCTTCTGTGTCTGTGTCTCGCATGGCCTTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR CCA 90 bp GTGAGATGCCATTTTAGCAGAGAGCTACTTCAATCAAGTATAGCTTGCTCTAAGCCCCTTCCCGGCCGCTaGAGAAGCCTGGGTGGGACC +
Preference number: 4 (lower is better)
Translates to: VRCHFSRELLQSSIACSKPLPGR*RSLGGT
Trigger: GGTCCCACCCAGGCTTCTCCAGCGGCCGGGAAGGGG...CTTAGAGCAAGCTATACTTGATTGAAGTAGCTCTCTGCTAAAATGGCATCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564657.2
3UTR CAA 72 bp CACAAGGAACAAGTCGACCTGGGCTATCAGCCCTTTTaGCCTGCACCGCACTGCGGCTCTGTTCAAATAGTA +
Preference number: 4 (lower is better)
Translates to: HKEQVDLGYQPF*PAPHCGSVQIV
Trigger: TACTATTTGAACAGAGCCGCAGTGCGGTGCAGGCAAAAAGGGCTGATAGCCCAGGTCGACTTGTTCCTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR TCA 90 bp CGTGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCAAACATTTCCCAGCATGGCTATCATTaGGGATGTCTCCGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: RGGRQFRMKGPATRANISQHGYH*GCLRSS
Trigger: GGAAGAACGGAGACATCCTCAATGATAGCCATGCTG...GGAAATGTTTGCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307921.7
ENST00000564657.2
CDS-3UTR TCA 90 bp CTTGTCCTGCGTGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCATTCCACACTCCTTTTTaGGTTCCTGGGACAAAGATG +
Preference number: 4 (lower is better)
Translates to: LVLRGGRQFRMKGPATRAFHTPF*VPGTKM
Trigger: CATCTTTGTCCCAGGAACTCAAAAAGGAGTGTGGAA...TGCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCACGCAGGACAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR TCA 90 bp TGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCAAACATTTCCTTGCTGTGGATGCCTGGTaGGATTGGGCCACTTTTCTG +
Preference number: 4 (lower is better)
Translates to: WRKAVQDEGSCYQSKHFLAVDAW*DWATFL
Trigger: CAGAAAAGTGGCCCAATCTCACCAGGCATCCACAGC...AAGGAAATGTTTGCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR TCA 90 bp CTTTGTTGTTCCCTGTGGAAAGCCATTGGCAGTAACATCCAAAGGCTGCTCAGGCCAGTCCCTCTACAGTaGGATCACAGCTGTGGATGC +
Preference number: 4 (lower is better)
Translates to: LCCSLWKAIGSNIQRLLRPVPLQ*DHSCGC
Trigger: GCATCCACAGCTGTGATCTCACTGTAGAGGGACTGG...CCTGAGCAGCCTTTGGATGTTACTGCCAATGGCTTTCCACAGGGAACAACAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR TCA 90 bp CCAAGCCTGGCCACCTTTTGGCTTTTTGGACAGAACTCTTTCAATTGTAAGTCAAGCAGCCCCACCTGGTaGAACGCAGCACCCGGCTTT +
Preference number: 4 (lower is better)
Translates to: PSLATFWLFGQNSFNCKSSSPTW*NAAPGF
Trigger: AAAGCCGGGTGCTGCGTTTCACCAGGTGGGGCTGCT...TGACTTACAATTGAAAGAGTTCTGTCCAAAAAGCCAAAAGGTGGCCAGGCTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000566445.5
CDS-3UTR TCA 90 bp ACAGGGAAGAAGGCCATGCGAGACACAGACACAGAAGGCCATGTGAAGACGGAGGCTAAGGAGGAAGCATaGAAGAGTCTTCTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: TGKKAMRDTDTEGHVKTEAKEEA*KSLLQS
Trigger: GCTCTGAAGAAGACTCTTTCATGCTTCCTCCTTAGC...CTCCGTCTTCACATGGCCTTCTGTGTCTGTGTCTCGCATGGCCTTCTTCCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR GCA 90 bp CGTGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCAAACATTTCCACACCTTCCAATCAGTaGTCTCTGCATGGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: RGGRQFRMKGPATRANISTPSNQ*SLHGFL
Trigger: CAGGAAGCCATGCAGAGAGCACTGATTGGAAGGTGT...GGAAATGTTTGCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR GCA 90 bp AGGGAAGAAGGCCATGCGAGACACAGACACAGAAGGCCATGTGAAGACGGAGGGTGTCCCTTGCAATTCTaGTTAGCAGCTTCTGGAATG +
Preference number: 4 (lower is better)
Translates to: REEGHARHRHRRPCEDGGCPLQF*LAASGM
Trigger: CATTCCAGAAGCTGCTAAGCAGAATTGCAAGGGACA...CCCTCCGTCTTCACATGGCCTTCTGTGTCTGTGTCTCGCATGGCCTTCTTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR GCA 90 bp GTCTCCAGCTTCTCCAGGTACACACTTGGCTCCAGTTCTATAAACGTCTATCACCCTGCTTCCGGAGTGTaGTCCAGGCTTCCTGGTAAG +
Preference number: 4 (lower is better)
Translates to: VSSFSRYTLGSSSINVYHPASGV*SRLPGK
Trigger: CTTACCAGGAAGCCTGGAGCACACTCCGGAAGCAGG...GTGATAGACGTTTATAGAACTGGAGCCAAGTGTGTACCTGGAGAAGCTGGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR GCA 90 bp GAGGAACGGGAAGTGACTGCTAATGGGTTCTGCAATGGGTTGAGTGGTGTCCCCCAGGATGAAGGGTCCTaGTACCAGAGCAAACATTTC +
Preference number: 4 (lower is better)
Translates to: EEREVTANGFCNGLSGVPQDEGS*YQSKHF
Trigger: GAAATGTTTGCTCTGGTAGCAGGACCCTTCATCCTG...GGGGACACCACTCAACCCATTGCAGAACCCATTAGCAGTCACTTCCCGTTCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR CCA 90 bp CCTGCGTGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCAAACATAATAATGTCCACTCATaGTTTGGCTCAGGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: PAWRKAVQDEGSCYQSKHNNVHS*FGSGFP
Trigger: GGGGAAGCCTGAGCCAAACCATGAGTGGACATTATT...ATGTTTGCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCACGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp CGTGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCAAACATTTCCGCAGGCCTTGTCAGCTaGAGATTGTATCTTCACCAC +
Preference number: 4 (lower is better)
Translates to: RGGRQFRMKGPATRANISAGLVS*RLYLHH
Trigger: GTGGTGAAGATACAATCTCCAGCTGACAAGGCCTGC...GGAAATGTTTGCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp CACAGACACAGGGAAGAAGGCCATGCGAGACACAGACACAGAAGGCCATGTGAAGCAGGCCTTGTCAGCTaGAGATTGTATCTTCACCAC +
Preference number: 4 (lower is better)
Translates to: HRHREEGHARHRHRRPCEAGLVS*RLYLHH
Trigger: GTGGTGAAGATACAATCTCCAGCTGACAAGGCCTGC...TTCACATGGCCTTCTGTGTCTGTGTCTCGCATGGCCTTCTTCCCTGTGTCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR CCA 90 bp CGTGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCAAACATTTCCTATCCTCTTTCAGGGTaGCTGCCAACTGGAGTTGGT +
Preference number: 4 (lower is better)
Translates to: RGGRQFRMKGPATRANISYPLSG*LPTGVG
Trigger: ACCAACTCCAGTTGGCAGCCACCCTGAAAGAGGATA...GGAAATGTTTGCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp CACTCCTTTTTGAGTTCCTGGGACAAAGATGCTATCCTCTTTCAGGGTGGCTGCTCAGTGCTCTCTGCATaGCTTCCTGGCTGTATGGGC +
Preference number: 4 (lower is better)
Translates to: HSFLSSWDKDAILFQGGCSVLSA*LPGCMG
Trigger: GCCCATACAGCCAGGAAGCCATGCAGAGAGCACTGA...GCAGCCACCCTGAAAGAGGATAGCATCTTTGTCCCAGGAACTCAAAAAGGAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR CCA 90 bp CGTGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCAAACATTTCCCTGGTGATAATCCGGTaGGTTTCTGATCCAGGATCC +
Preference number: 4 (lower is better)
Translates to: RGGRQFRMKGPATRANISLVIIR*VSDPGS
Trigger: GGATCCTGGATCAGAAACCCACCGGATTATCACCAG...GGAAATGTTTGCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp CGTGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCAAACATTTCCAAGACTTGTCCTGCGTaGAGGAAGGCAGTTCAGGAT +
Preference number: 4 (lower is better)
Translates to: RGGRQFRMKGPATRANISKTCPA*RKAVQD
Trigger: ATCCTGAACTGCCTTCCTCCACGCAGGACAAGTCTT...GGAAATGTTTGCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp ACGTCTATCACTTTGGCACTACCAGGGGCTATTCTGGTGACAGTAGCCAGTCCCAAGACTTGTCCTGCGTaGAGGAAGGCAGTTCAGGAT +
Preference number: 4 (lower is better)
Translates to: TSITLALPGAILVTVASPKTCPA*RKAVQD
Trigger: ATCCTGAACTGCCTTCCTCCACGCAGGACAAGTCTT...GGGACTGGCTACTGTCACCAGAATAGCCCCTGGTAGTGCCAAAGTGATAGACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR CCA 90 bp TTATGTGACCCTTACAGCTCCAGATCAAAACAGAAAGCCTTTCCTGATACCTCTGAGCGCCTGATCCATTaGGTCCTGCGGCTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: LCDPYSSRSKQKAFPDTSERLIH*VLRLPG
Trigger: GCCTGGCAGCCGCAGGACCCAATGGATCAGGCGCTC...AGAGGTATCAGGAAAGGCTTTCTGTTTTGATCTGGAGCTGTAAGGGTCACATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR CCA 90 bp ACAGGGAAGAAGGCCATGCGAGACACAGACACAGAAGGCCATGTGAAGACGGAGAGCCTGGCCACCTTTTaGCTTTTTGGACAGAACTCT +
Preference number: 4 (lower is better)
Translates to: TGKKAMRDTDTEGHVKTESLATF*LFGQNS
Trigger: AGAGTTCTGTCCAAAAAGCCAAAAGGTGGCCAGGCT...CTCCGTCTTCACATGGCCTTCTGTGTCTGTGTCTCGCATGGCCTTCTTCCCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR TCA 90 bp GCAAGGCTGATCTTCAAACTCAAGCATCGGAATGATGGAGGCATCCCCACAGGGACAGGACAGCAAGGCTaGTCTTCAAACTCAAGCATC +
Preference number: 4 (lower is better)
Translates to: ARLIFKLKHRNDGGIPTGTGQQG*SSNSSI
Trigger: GATGCTTGAGTTTGAAGATCAGCCTTGCTGTCCTGT...CCCTGTGGGGATGCCTCCATCATTCCGATGCTTGAGTTTGAAGATCAGCCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566445.5
ENST00000568001.5
CDS-3UTR TCA 90 bp TGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCAAACATTTCCTTTGTGGGCCCAATTTCTaGAGACAGGACAGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: WRKAVQDEGSCYQSKHFLCGPNF*RQDSKA
Trigger: AGCCTTGCTGTCCTGTCTTCAGAAATTGGGCCCACA...AAGGAAATGTTTGCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR TCA 90 bp CCTGCGTGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCAAACATAAAGCAGACACATTCTaGCACCTTCCAATCAGTGCT +
Preference number: 4 (lower is better)
Translates to: PAWRKAVQDEGSCYQSKHKADTF*HLPISA
Trigger: AGCACTGATTGGAAGGTGTCAGAATGTGTCTGCTTT...ATGTTTGCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCACGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR TCA 90 bp CTCAAGCATCGGAATGATGGAGGCATCCCCACAGGGTGTATGGCTGGAGAAAAAAATCCGGTGGGTTTCTaGTCCAGGATCCAAACACCT +
Preference number: 4 (lower is better)
Translates to: LKHRNDGGIPTGCMAGEKNPVGF*SRIQTP
Trigger: AGGTGTTTGGATCCTGGATCAGAAACCCACCGGATT...TTTTTCTCCAGCCATACACCCTGTGGGGATGCCTCCATCATTCCGATGCTTGAG
51% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR TCA 90 bp GAGGAACGGGAAGTGACTGCTAATGGGTTCTGCAATGGGTTGAGTGGTGTCCCCACAGAGCAGGATCACTaGAGAATGGGAAAAGAATGG +
Preference number: 4 (lower is better)
Translates to: EEREVTANGFCNGLSGVPTEQDH*RMGKEW
Trigger: CCATTCTTTTCCCATTCTTCAGTGATCCTGCTCTGT...GGGGACACCACTCAACCCATTGCAGAACCCATTAGCAGTCACTTCCCGTTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR TCA 90 bp AGGCTTCCTGGTAAGAGGACGCAGCCTCCTTGTACTCCTGGTAGGTATCCAGCTACAGAGCAGGATCACTaGAGAATGGGAAAAGAATGG +
Preference number: 4 (lower is better)
Translates to: RLPGKRTQPPCTPGRYPATEQDH*RMGKEW
Trigger: CCATTCTTTTCCCATTCTTCAGTGATCCTGCTCTGT...AGCTGGATACCTACCAGGAGTACAAGGAGGCTGCGTCCTCTTACCAGGAAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR TCA 90 bp ACAGACACAGGGAAGAAGGCCATGCGAGACACAGACACAGAAGGCCATGTGAAGGGATTCACGCTCCTATaGGAATCTAATGCCACTGCT +
Preference number: 4 (lower is better)
Translates to: TDTGKKAMRDTDTEGHVKGFTLL*ESNATA
Trigger: AGCAGTGGCATTAGATTCTCATAGGAGCGTGAATCC...CTTCACATGGCCTTCTGTGTCTGTGTCTCGCATGGCCTTCTTCCCTGTGTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR GCA 90 bp CCCACCAACAACCTGTTTGGACTTCTAGCCTCCAGAACTGAAAGGGGATACAGTAAGGCACTGAAGCCATaGAGTGAGAACAGCGTGAGC +
Preference number: 4 (lower is better)
Translates to: PTNNLFGLLASRTERGYSKALKP*SENSVS
Trigger: GCTCACGCTGTTCTCACTGCATGGCTTCAGTGCCTT...ACTGTATCCCCTTTCAGTTCTGGAGGCTAGAAGTCCAAACAGGTTGTTGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR GCA 90 bp CGTGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCAAACATTTCCGGTCTATTGCTGATTTaGTGCAGGGCCTTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: RGGRQFRMKGPATRANISGLLLI*CRAFWL
Trigger: AAGCCAAAAGGCCCTGCAGCAAATCAGCAATAGACC...GGAAATGTTTGCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR GCA 90 bp CCCACCAACAACCTGTTTGGACTTCTAGCCTCCAGAACTGAAAGGGGATACAGTATGATCTTGACTCACTaGAACCTCCGCCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: PTNNLFGLLASRTERGYSMILTH*NLRLPG
Trigger: ACCTGGGAGGCGGAGGTTGCAGTGAGTCAAGATCAT...ACTGTATCCCCTTTCAGTTCTGGAGGCTAGAAGTCCAAACAGGTTGTTGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR CCA 90 bp CGTGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCAAACATTTCCGCCAACTGGAGTTGGTaGAGAAGGTACCTTTGGAAA +
Preference number: 4 (lower is better)
Translates to: RGGRQFRMKGPATRANISANWSW*RRYLWK
Trigger: TTTCCAAAGGTACCTTCTCCACCAACTCCAGTTGGC...GGAAATGTTTGCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp GGCTTCCTGGTAAGAGGACGCAGCCTCCTTGTACTCCTGGTAGGTATCCAGCTTTCCCCACAGGGTGTATaGCTGGAGAAAAACACAAAA +
Preference number: 4 (lower is better)
Translates to: GFLVRGRSLLVLLVGIQLSPQGV*LEKNTK
Trigger: TTTTGTGTTTTTCTCCAGCCATACACCCTGTGGGGA...AAGCTGGATACCTACCAGGAGTACAAGGAGGCTGCGTCCTCTTACCAGGAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR CCA 90 bp ATCTTCAAACTCAAGCATCGGAATGATGGAGGCATCCCCACAGGGTGTATGGCTATCAACAGTGCCCCTTaGCATCCGAGGACGTTCCAT +
Preference number: 4 (lower is better)
Translates to: IFKLKHRNDGGIPTGCMAINSAP*HPRTFH
Trigger: ATGGAACGTCCTCGGATGCCAAGGGGCACTGTTGAT...AGCCATACACCCTGTGGGGATGCCTCCATCATTCCGATGCTTGAGTTTGAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR CCA 90 bp TGCCCTAAAGCTTTTAGAGGAAGCAGAAGCCCCACCAACAACCTGTTTGGACTTTGGAGGAAGGGACTCTaGTTTACGCTGGCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: CPKAFRGSRSPTNNLFGLWRKGL*FTLAPF
Trigger: GAAGGGAGCCAGCGTAAACCAGAGTCCCTTCCTCCA...AAGTCCAAACAGGTTGTTGGTGGGGCTTCTGCTTCCTCTAAAAGCTTTAGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR CCA 90 bp ACAGGGAAGAAGGCCATGCGAGACACAGACACAGAAGGCCATGTGAAGACGGAGCTTATAAGTAGGCCATaGAAAGACACAGACACAGGG +
Preference number: 4 (lower is better)
Translates to: TGKKAMRDTDTEGHVKTELISRP*KDTDTG
Trigger: CCCTGTGTCTGTGTCTTTCCATGGCCTACTTATAAG...CTCCGTCTTCACATGGCCTTCTGTGTCTGTGTCTCGCATGGCCTTCTTCCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000568510.1
CDS-3UTR CCA 90 bp TCTTCAGAGCAGCAGTCCCCAAGGCACGAAAAAGTCTTCCTTAGAGCAGCAGTCCAGGCTGGAGTGCAATaGCATGATCTTGACTCACTG +
Preference number: 4 (lower is better)
Translates to: SSEQQSPRHEKVFLRAAVQAGVQ*HDLDSL
Trigger: CAGTGAGTCAAGATCATGCCATTGCACTCCAGCCTG...GACTGCTGCTCTAAGGAAGACTTTTTCGTGCCTTGGGGACTGCTGCTCTGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR CCA 90 bp CTGATCTTCAAACTCAAGCATCGGAATGATGGAGGCATCCCCACAGGGTGTATGGCTGCCAACTGGAGTTaGTGGAGAAGGTACCGTTCT +
Preference number: 4 (lower is better)
Translates to: LIFKLKHRNDGGIPTGCMAANWS*WRRYRS
Trigger: AGAACGGTACCTTCTCCACCAACTCCAGTTGGCAGC...CATACACCCTGTGGGGATGCCTCCATCATTCCGATGCTTGAGTTTGAAGATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568001.5
CDS-3UTR CCA 90 bp GCAAGGCTGATCTTCAAACTCAAGCATCGGAATGATGGAGGCATCCCCACAGGGAAGCTGGAGAGGGTCTaGTTCCGTTCTTCCTCATTT +
Preference number: 4 (lower is better)
Translates to: ARLIFKLKHRNDGGIPTGKLERV*FRSSSF
Trigger: AAATGAGGAAGAACGGAACCAGACCCTCTCCAGCTT...CCCTGTGGGGATGCCTCCATCATTCCGATGCTTGAGTTTGAAGATCAGCCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR CCA 90 bp ACGTCTATCACTTTGGCACTACCAGGGGCTATTCTGGTGACAGTAGCCAGTCCCAAGACATATGGAAGCTaGAGAGGGTCTGGTTCCGTT +
Preference number: 4 (lower is better)
Translates to: TSITLALPGAILVTVASPKTYGS*RGSGSV
Trigger: AACGGAACCAGACCCTCTCCAGCTTCCATATGTCTT...GGGACTGGCTACTGTCACCAGAATAGCCCCTGGTAGTGCCAAAGTGATAGACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR CCA 90 bp CTTTGTTGTTCCCTGTGGAAAGCCATTGGCAGTAACATCCAAAGGCTGCTCAGGCCAGGTGAAGACATATaGAAGCTGGAGAGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: LCCSLWKAIGSNIQRLLRPGEDI*KLERVW
Trigger: CCAGACCCTCTCCAGCTTCCATATGTCTTCACCTGG...CCTGAGCAGCCTTTGGATGTTACTGCCAATGGCTTTCCACAGGGAACAACAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566445.5
3UTR CAA 72 bp GGAGCTTCCAGGTTACTACTGGCTTCTACTGATGAGTaGTGGGCCCAATTTCTGAAGACAGGACAGCAAGGC +
Preference number: 4 (lower is better)
Translates to: GASRLLLASTDE*WAQFLKTGQQG
Trigger: GCCTTGCTGTCCTGTCTTCAGAAATTGGGCCCACAACTCATCAGTAGAAGCCAGTAGTAACCTGGAAGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR TCA 90 bp TGCCCTAAAGCTTTTAGAGGAAGCAGAAGCCCCACCAACAACCTGTTTGGACTTCCTTCTTGGGCAGCCTaGTCCCATAGTGTTCATAGC +
Preference number: 4 (lower is better)
Translates to: CPKAFRGSRSPTNNLFGLPSWAA*SHSVHS
Trigger: GCTATGAACACTATGGGATCAGGCTGCCCAAGAAGG...AAGTCCAAACAGGTTGTTGGTGGGGCTTCTGCTTCCTCTAAAAGCTTTAGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR TCA 90 bp GTCTCCAGCTTCTCCAGGTACACACTTGGCTCCAGTTCTATAAACGTCTATCACCCTTCTTGGGCAGCCTaGTCCCATAGTGTTCATAGC +
Preference number: 4 (lower is better)
Translates to: VSSFSRYTLGSSSINVYHPSWAA*SHSVHS
Trigger: GCTATGAACACTATGGGATCAGGCTGCCCAAGAAGG...GTGATAGACGTTTATAGAACTGGAGCCAAGTGTGTACCTGGAGAAGCTGGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR TCA 90 bp GTAGGCCATGGAAAGACACAGACACAGGGAAGAAGGCCATGCGAGACACAGACATTCCACACTCCTTTTTaGGTTCCTGGGACAAAGATG +
Preference number: 4 (lower is better)
Translates to: VGHGKTQTQGRRPCETQTFHTPF*VPGTKM
Trigger: CATCTTTGTCCCAGGAACTCAAAAAGGAGTGTGGAA...TGTCTGTGTCTCGCATGGCCTTCTTCCCTGTGTCTGTGTCTTTCCATGGCCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR TCA 90 bp GCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGCTCAGAAAGCAGCCCCACCTGGTaGAACGCAGCACCCGGCTTT +
Preference number: 4 (lower is better)
Translates to: ALSSRFHLYYTTEMQSSESSPTW*NAAPGF
Trigger: AAAGCCGGGTGCTGCGTTTCACCAGGTGGGGCTGCT...TTCTGAGCTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR TCA 90 bp GCAAGGCTGATCTTCAAACTCAAGCATCGGAATGATGGAGGCATCCCCACAGGGAAAGCAGACACATTCTaGCACCTTCCAATCAGTGCT +
Preference number: 4 (lower is better)
Translates to: ARLIFKLKHRNDGGIPTGKADTF*HLPISA
Trigger: AGCACTGATTGGAAGGTGTCAGAATGTGTCTGCTTT...CCCTGTGGGGATGCCTCCATCATTCCGATGCTTGAGTTTGAAGATCAGCCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR TCA 90 bp ATCAGGCATTATATTCTCATAAGGAGTGTGCAACCTAGATCCCTTGCATGCACACCAGCTTCTGCACCCTaGGGGAGTGTGGCCACTTGT +
Preference number: 4 (lower is better)
Translates to: IRHYILIRSVQPRSLACTPASAP*GSVATC
Trigger: ACAAGTGGCCACACTCCCTCAGGGTGCAGAAGCTGG...TGTGCATGCAAGGGATCTAGGTTGCACACTCCTTATGAGAATATAATGCCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR TCA 90 bp AAGATGAAATCAGACTGGATTAGGGCAGGCCCTAAATCCAATTACTGGGGTCCTGAAGGCAGTTCAGGATaGAGGGTCCTGCTACCAGAG +
Preference number: 4 (lower is better)
Translates to: KMKSDWIRAGPKSNYWGPEGSSG*RVLLPE
Trigger: CTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTC...AGGACCCCAGTAATTGGATTTAGGGCCTGCCCTAATCCAGTCTGATTTCATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR GCA 90 bp TCTATAAACGTCTATCACTTTGGCACTACCAGGGGCTATTCTGGTGACAGTAGCGGCTCTTCCAGCAAGTaGATCAACAGTGCCCCTTGG +
Preference number: 4 (lower is better)
Translates to: SINVYHFGTTRGYSGDSSGSSSK*INSAPW
Trigger: CCAAGGGGCACTGTTGATGCACTTGCTGGAAGAGCC...GCTACTGTCACCAGAATAGCCCCTGGTAGTGCCAAAGTGATAGACGTTTATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR GCA 90 bp CAAGCCTGGCCACCTTTTGGCTTTTTGGACAGAACTCTTTCAATTGTAAGTCAGGCTATCAGCCCTTTTTaGCTGCACCGCACTGCGGCT +
Preference number: 4 (lower is better)
Translates to: QAWPPFGFLDRTLSIVSQAISPF*LHRTAA
Trigger: AGCCGCAGTGCGGTGCAGGCAAAAAGGGCTGATAGC...CTGACTTACAATTGAAAGAGTTCTGTCCAAAAAGCCAAAAGGTGGCCAGGCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000566445.5
CDS-3UTR GCA 90 bp ATCTTCAAACTCAAGCATCGGAATGATGGAGGCATCCCCACAGGGTGTATGGCTGTAACATCCAAAGGCTaGTCAGGAACTGCACTCCAG +
Preference number: 4 (lower is better)
Translates to: IFKLKHRNDGGIPTGCMAVTSKG*SGTALQ
Trigger: CTGGAGTGCAGTTCCTGAGCAGCCTTTGGATGTTAC...AGCCATACACCCTGTGGGGATGCCTCCATCATTCCGATGCTTGAGTTTGAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR CCA 90 bp CTGATCTTCAAACTCAAGCATCGGAATGATGGAGGCATCCCCACAGGGTGTATGTGTCCACTCATGGTTTaGCTCAGGCTTCCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: LIFKLKHRNDGGIPTGCMCPLMV*LRLPLL
Trigger: AAGAAGGGGAAGCCTGAGCCAAACCATGAGTGGACA...CATACACCCTGTGGGGATGCCTCCATCATTCCGATGCTTGAGTTTGAAGATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566445.5
ENST00000568001.5
CDS-3UTR CCA 90 bp ACAGCAAGGCTGATCTTCAAACTCAAGCATCGGAATGATGGAGGCATCCCCACAGCAGGCCTTGTCAGCTaGAGATTGTATCTTCACCAC +
Preference number: 4 (lower is better)
Translates to: TARLIFKLKHRNDGGIPTAGLVS*RLYLHH
Trigger: GTGGTGAAGATACAATCTCCAGCTGACAAGGCCTGC...TGTGGGGATGCCTCCATCATTCCGATGCTTGAGTTTGAAGATCAGCCTTGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566445.5
ENST00000568001.5
CDS-3UTR CCA 90 bp CACAGGGAAGAAGGCCATGCGAGACACAGACACAGAAGGCCATGTGAAGACGGACTTCCAGGTTACTACTaGCTTCTACTGATGAGTTGT +
Preference number: 4 (lower is better)
Translates to: HREEGHARHRHRRPCEDGLPGYY*LLLMSC
Trigger: ACAACTCATCAGTAGAAGCCAGTAGTAACCTGGAAG...TCCGTCTTCACATGGCCTTCTGTGTCTGTGTCTCGCATGGCCTTCTTCCCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR CCA 90 bp CGTGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCAAACATTTCCCTCCAGGTACACACTTaGCTCCAGTTCTATAAACGT +
Preference number: 4 (lower is better)
Translates to: RGGRQFRMKGPATRANISLQVHT*LQFYKR
Trigger: ACGTTTATAGAACTGGAGCCAAGTGTGTACCTGGAG...GGAAATGTTTGCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp GCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGCTCAGAATCTGTCTCCACGGCCTaGCTTCACTCGGAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: ALSSRFHLYYTTEMQSSESVSTA*LHSEQP
Trigger: GGGCTGCTCCGAGTGAAGCCAGGCCGTGGAGACAGA...TTCTGAGCTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp TGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCAAACATTTCCTTTGTCACTACAGGACATaGAGCGTGTTCTGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: WRKAVQDEGSCYQSKHFLCHYRT*SVFCLH
Trigger: GTGGAGACAGAACACGCTCCATGTCCTGTAGTGACA...AAGGAAATGTTTGCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp CGTGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCAAACATTTCCCTGCTTAGCAGCTTCTaGAATGATCTGAAGAGTTCC +
Preference number: 4 (lower is better)
Translates to: RGGRQFRMKGPATRANISLLSSF*NDLKSS
Trigger: GGAACTCTTCAGATCATTCCAGAAGCTGCTAAGCAG...GGAAATGTTTGCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
3UTR CAA 72 bp TCCCTGGCTGCAGTCCCAGGCTCAAGCCTCATCTTTTaGGTTACAGGACTGTCAGGGTCTTCACATTTTCTT +
Preference number: 4 (lower is better)
Translates to: SLAAVPGSSLIF*VTGLSGSSHFL
Trigger: AAGAAAATGTGAAGACCCTGACAGTCCTGTAACCAAAAAGATGAGGCTTGAGCCTGGGACTGCAGCCAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR TCA 90 bp CCAATTTCTGAAGACAGGACAGCAAGGCTGATCTTCAAACTCAAGCATCGGAATACTCAAGCATCGGAATaGTGGAGGCATCCCCACAGG +
Preference number: 4 (lower is better)
Translates to: PISEDRTARLIFKLKHRNTQASE*WRHPHR
Trigger: CCTGTGGGGATGCCTCCATCATTCCGATGCTTGAGT...ATTCCGATGCTTGAGTTTGAAGATCAGCCTTGCTGTCCTGTCTTCAGAAATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566445.5
ENST00000568001.5
CDS-3UTR TCA 90 bp CCACAGGGTGTATGGCTGGAGAAAAACACAAAAATGAGGTCTCGTCTAAGTTTCACTCAAGCATCGGAATaGTGGAGGCATCCCCACAGG +
Preference number: 4 (lower is better)
Translates to: PQGVWLEKNTKMRSRLSFTQASE*WRHPHR
Trigger: CCTGTGGGGATGCCTCCATCATTCCGATGCTTGAGT...GAAACTTAGACGAGACCTCATTTTTGTGTTTTTCTCCAGCCATACACCCTGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000566445.5
ENST00000568001.5
CDS-3UTR TCA 90 bp CCAAGCCTGGCCACCTTTTGGCTTTTTGGACAGAACTCTTTCAATTGTAAGTCACCAGTCCCTCTACAGTaGGATCACAGCTGTGGATGC +
Preference number: 4 (lower is better)
Translates to: PSLATFWLFGQNSFNCKSPVPLQ*DHSCGC
Trigger: GCATCCACAGCTGTGATCTCACTGTAGAGGGACTGG...TGACTTACAATTGAAAGAGTTCTGTCCAAAAAGCCAAAAGGTGGCCAGGCTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000566445.5
CDS-3UTR TCA 90 bp GTGAGATGCCATTTTAGCAGAGAGCTACTTCAATCAAGTATAGCTTGCTCTAAGCCAGCTTCTGCACCCTaGGGGAGTGTGGCCACTTGT +
Preference number: 4 (lower is better)
Translates to: VRCHFSRELLQSSIACSKPASAP*GSVATC
Trigger: ACAAGTGGCCACACTCCCTCAGGGTGCAGAAGCTGG...CTTAGAGCAAGCTATACTTGATTGAAGTAGCTCTCTGCTAAAATGGCATCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR TCA 90 bp AGGCTTCCTGGTAAGAGGACGCAGCCTCCTTGTACTCCTGGTAGGTATCCAGCTGTGTTACTAGATCTTTaGTTCTCTTGGCTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: RLPGKRTQPPCTPGRYPAVLLDL*FSWLFP
Trigger: AGGAAACAGCCAAGAGAATCAAAGATCTAGTAACAC...AGCTGGATACCTACCAGGAGTACAAGGAGGCTGCGTCCTCTTACCAGGAAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR GCA 90 bp GAAGAAGGCCATGCGAGACACAGACACAGAAGGCCATGTGAAGACGGAGGGAGATTTTGGACTGTCCTATaGATTTTGTTCCTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: EEGHARHRHRRPCEDGGRFWTVL*ILFLFP
Trigger: TGGGAACAGGAACAAAATGCATAGGACAGTCCAAAA...TCTCCCTCCGTCTTCACATGGCCTTCTGTGTCTGTGTCTCGCATGGCCTTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR GCA 90 bp TGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCAAACATTTCCTTTTCCTGGGACAAAGATaGTATCCTCTTTCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: WRKAVQDEGSCYQSKHFLFLGQR*YPLSGW
Trigger: CCACCCTGAAAGAGGATAGCATCTTTGTCCCAGGAA...AAGGAAATGTTTGCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR GCA 90 bp CAGGGTGTATGGCTGGAGAAAAACACAAAAATGAGGTCTCGTCTAAGTTTCCACCAAGTGCATCAACAGTaGCCCTTGGCATCCGAGGAC +
Preference number: 4 (lower is better)
Translates to: QGVWLEKNTKMRSRLSFHQVHQQ*PLASED
Trigger: GTCCTCGGATGCCAAGGGGCACTGTTGATGCACTTG...GTGGAAACTTAGACGAGACCTCATTTTTGTGTTTTTCTCCAGCCATACACCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR GCA 90 bp ACGTCTATCACTTTGGCACTACCAGGGGCTATTCTGGTGACAGTAGCCAGTCCCGTTGCCTTCATTCTTTaGTGGCTTTCTCTAGGTAGT +
Preference number: 4 (lower is better)
Translates to: TSITLALPGAILVTVASPVAFIL*WLSLGS
Trigger: ACTACCTAGAGAAAGCCAGCAAAGAATGAAGGCAAC...GGGACTGGCTACTGTCACCAGAATAGCCCCTGGTAGTGCCAAAGTGATAGACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR GCA 90 bp CAAGCCTGGCCACCTTTTGGCTTTTTGGACAGAACTCTTTCAATTGTAAGTCAGTCACCCAGGCTGGAGTaGAGCGGTACGATCTTTGCT +
Preference number: 4 (lower is better)
Translates to: QAWPPFGFLDRTLSIVSQSPRLE*SGTIFA
Trigger: AGCAAAGATCGTACCGCTGCACTCCAGCCTGGGTGA...CTGACTTACAATTGAAAGAGTTCTGTCCAAAAAGCCAAAAGGTGGCCAGGCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp CTGATCTTCAAACTCAAGCATCGGAATGATGGAGGCATCCCCACAGGGTGTATGAATAATGTCCACTCATaGTTTGGCTCAGGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: LIFKLKHRNDGGIPTGCMNNVHS*FGSGFP
Trigger: GGGGAAGCCTGAGCCAAACCATGAGTGGACATTATT...CATACACCCTGTGGGGATGCCTCCATCATTCCGATGCTTGAGTTTGAAGATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566445.5
ENST00000568001.5
CDS-3UTR CCA 90 bp TGCCCTAAAGCTTTTAGAGGAAGCAGAAGCCCCACCAACAACCTGTTTGGACTTTATCCTCTTTCAGGGTaGCTGCCAACTGGAGTTGGT +
Preference number: 4 (lower is better)
Translates to: CPKAFRGSRSPTNNLFGLYPLSG*LPTGVG
Trigger: ACCAACTCCAGTTGGCAGCCACCCTGAAAGAGGATA...AAGTCCAAACAGGTTGTTGGTGGGGCTTCTGCTTCCTCTAAAAGCTTTAGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR CCA 90 bp CACAGACACAGGGAAGAAGGCCATGCGAGACACAGACACAGAAGGCCATGTGAATCCTTTTTGAGTTCCTaGGACAAAGATGCTATCCTC +
Preference number: 4 (lower is better)
Translates to: HRHREEGHARHRHRRPCESFLSS*DKDAIL
Trigger: GAGGATAGCATCTTTGTCCCAGGAACTCAAAAAGGA...TTCACATGGCCTTCTGTGTCTGTGTCTCGCATGGCCTTCTTCCCTGTGTCTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR CCA 90 bp CGTGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCAAACATTTCCCTTCCAGGTTACTACTaGCTTCTACTGATGAGTTGT +
Preference number: 4 (lower is better)
Translates to: RGGRQFRMKGPATRANISLPGYY*LLLMSC
Trigger: ACAACTCATCAGTAGAAGCCAGTAGTAACCTGGAAG...GGAAATGTTTGCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp ACGTCTATCACTTTGGCACTACCAGGGGCTATTCTGGTGACAGTAGCCAGTCCCCTTCCAGGTTACTACTaGCTTCTACTGATGAGTTGT +
Preference number: 4 (lower is better)
Translates to: TSITLALPGAILVTVASPLPGYY*LLLMSC
Trigger: ACAACTCATCAGTAGAAGCCAGTAGTAACCTGGAAG...GGGACTGGCTACTGTCACCAGAATAGCCCCTGGTAGTGCCAAAGTGATAGACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR CCA 90 bp AAGATGAAATCAGACTGGATTAGGGCAGGCCCTAAATCCAATTACTGGGGTCCTATCAACAGTGCCCCTTaGCATCCGAGGACGTTCCAT +
Preference number: 4 (lower is better)
Translates to: KMKSDWIRAGPKSNYWGPINSAP*HPRTFH
Trigger: ATGGAACGTCCTCGGATGCCAAGGGGCACTGTTGAT...AGGACCCCAGTAATTGGATTTAGGGCCTGCCCTAATCCAGTCTGATTTCATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR CCA 90 bp TCTATAAACGTCTATCACTTTGGCACTACCAGGGGCTATTCTGGTGACAGTAGCCAGCTGACAGGTAGATaGGCTCTTCCAGCAAGTGCA +
Preference number: 4 (lower is better)
Translates to: SINVYHFGTTRGYSGDSSQLTGR*ALPASA
Trigger: TGCACTTGCTGGAAGAGCCCATCTACCTGTCAGCTG...GCTACTGTCACCAGAATAGCCCCTGGTAGTGCCAAAGTGATAGACGTTTATAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR CCA 90 bp ACCCCAACATGGGAGCTTCCATTTTCAGTCAATCATTCAAGGTCTGAAGTTGAGCTCTGCATGGCTTCCTaGCTGTATGGGCACTTCCCA +
Preference number: 4 (lower is better)
Translates to: TPTWELPFSVNHSRSEVELCMAS*LYGHFP
Trigger: TGGGAAGTGCCCATACAGCCAGGAAGCCATGCAGAG...CTCAACTTCAGACCTTGAATGATTGACTGAAAATGGAAGCTCCCATGTTGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR CCA 90 bp ACAGACACAGGGAAGAAGGCCATGCGAGACACAGACACAGAAGGCCATGTGAAGAAGATGAAATCAGACTaGATTAGGGCAGGCCCTAAA +
Preference number: 4 (lower is better)
Translates to: TDTGKKAMRDTDTEGHVKKMKSD*IRAGPK
Trigger: TTTAGGGCCTGCCCTAATCCAGTCTGATTTCATCTT...CTTCACATGGCCTTCTGTGTCTGTGTCTCGCATGGCCTTCTTCCCTGTGTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000568510.1
CDS-3UTR CCA 90 bp AGATCAAAACAGAAAGCCTTTCCTGATACCTCTGAGAACAAGTCCAGGGCAGTCCTGAGCCACCAAGCCTaGCCACCTTTTGGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: RSKQKAFPDTSENKSRAVLSHQA*PPFGFL
Trigger: CAAAAAGCCAAAAGGTGGCCAGGCTTGGTGGCTCAG...GACTGCCCTGGACTTGTTCTCAGAGGTATCAGGAAAGGCTTTCTGTTTTGATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp CGTGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCAAACATTTCCATGTTAAAACAGGATTaGCTGCTGGGTCTATTGCTG +
Preference number: 4 (lower is better)
Translates to: RGGRQFRMKGPATRANISMLKQD*LLGLLL
Trigger: CAGCAATAGACCCAGCAGCCAATCCTGTTTTAACAT...GGAAATGTTTGCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR TCA 90 bp CAGGGTGTATGGCTGGAGAAAAACACAAAAATGAGGTCTCGTCTAAGTTTCCACCCTTCTTGGGCAGCCTaGTCCCATAGTGTTCATAGC +
Preference number: 4 (lower is better)
Translates to: QGVWLEKNTKMRSRLSFHPSWAA*SHSVHS
Trigger: GCTATGAACACTATGGGATCAGGCTGCCCAAGAAGG...GTGGAAACTTAGACGAGACCTCATTTTTGTGTTTTTCTCCAGCCATACACCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000566445.5
ENST00000568001.5
CDS-3UTR TCA 90 bp GCTTGCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGCTCGCTGTGGATGCCTGGTaGGATTGGGCCACTTTTCTG +
Preference number: 4 (lower is better)
Translates to: ACSKFQIPSVLHNRDAKLAVDAW*DWATFL
Trigger: CAGAAAAGTGGCCCAATCTCACCAGGCATCCACAGC...GAGCTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGCAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR TCA 90 bp GCTTGCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGCTCCCCAATGACCACAGCTaGCAGGTAGATGGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: ACSKFQIPSVLHNRDAKLPNDHS*QVDGLF
Trigger: GAAGAGCCCATCTACCTGTCAGCTGTGGTCATTGGG...GAGCTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGCAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR TCA 90 bp AGAGAGCTACTTCAATCAAGTATAGCTTGCTCTAAGTTCCAGATTCCATCTGTACCAGCTTCTGCACCCTaGGGGAGTGTGGCCACTTGT +
Preference number: 4 (lower is better)
Translates to: RELLQSSIACSKFQIPSVPASAP*GSVATC
Trigger: ACAAGTGGCCACACTCCCTCAGGGTGCAGAAGCTGG...TACAGATGGAATCTGGAACTTAGAGCAAGCTATACTTGATTGAAGTAGCTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR TCA 90 bp CACAGACACAGGGAAGAAGGCCATGCGAGACACAGACACAGAAGGCCATGTGAAATAGCCACAAAATGCTaGAGAACCAATAAGGACCTT +
Preference number: 4 (lower is better)
Translates to: HRHREEGHARHRHRRPCEIATKC*RTNKDL
Trigger: AAGGTCCTTATTGGTTCTTCAGCATTTTGTGGCTAT...TTCACATGGCCTTCTGTGTCTGTGTCTCGCATGGCCTTCTTCCCTGTGTCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR TCA 90 bp ATCAGGCATTATATTCTCATAAGGAGTGTGCAACCTAGATCCCTTGCATGCACATCTGCCTCAGCCTCCTaGGTAGTTGGGACTATAGGC +
Preference number: 4 (lower is better)
Translates to: IRHYILIRSVQPRSLACTSASAS*VVGTIG
Trigger: GCCTATAGTCCCAACTACTCAGGAGGCTGAGGCAGA...TGTGCATGCAAGGGATCTAGGTTGCACACTCCTTATGAGAATATAATGCCTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR TCA 90 bp CACAGACACAGGGAAGAAGGCCATGCGAGACACAGACACAGAAGGCCATGTGAAAGCCATAAATACAGATaGAACTTCAAGTGCTCACCT +
Preference number: 4 (lower is better)
Translates to: HRHREEGHARHRHRRPCESHKYR*NFKCSP
Trigger: AGGTGAGCACTTGAAGTTTCATCTGTATTTATGGCT...TTCACATGGCCTTCTGTGTCTGTGTCTCGCATGGCCTTCTTCCCTGTGTCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR GCA 90 bp CTTGCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGCTCAGCTATCAGCCCTTTTTaGCTGCACCGCACTGCGGCT +
Preference number: 4 (lower is better)
Translates to: LALSSRFHLYYTTEMQSSAISPF*LHRTAA
Trigger: AGCCGCAGTGCGGTGCAGGCAAAAAGGGCTGATAGC...TGAGCTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR GCA 90 bp AGCAGAGAGCTACTTCAATCAAGTATAGCTTGCTCTAAGTTCCAGATTCCATCTGCTATCAGCCCTTTTTaGCTGCACCGCACTGCGGCT +
Preference number: 4 (lower is better)
Translates to: SRELLQSSIACSKFQIPSAISPF*LHRTAA
Trigger: AGCCGCAGTGCGGTGCAGGCAAAAAGGGCTGATAGC...AGATGGAATCTGGAACTTAGAGCAAGCTATACTTGATTGAAGTAGCTCTCTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR GCA 90 bp CTTGCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGCTCAAGGCTGCTCAGGAACTaGACTCCAGCTGATGGCTGC +
Preference number: 4 (lower is better)
Translates to: LALSSRFHLYYTTEMQSSRLLRN*TPADGC
Trigger: GCAGCCATCAGCTGGAGTGCAGTTCCTGAGCAGCCT...TGAGCTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR GCA 90 bp GTGAGATGCCATTTTAGCAGAGAGCTACTTCAATCAAGTATAGCTTGCTCTAAGAGGCTGCTCAGGAACTaGACTCCAGCTGATGGCTGC +
Preference number: 4 (lower is better)
Translates to: VRCHFSRELLQSSIACSKRLLRN*TPADGC
Trigger: GCAGCCATCAGCTGGAGTGCAGTTCCTGAGCAGCCT...CTTAGAGCAAGCTATACTTGATTGAAGTAGCTCTCTGCTAAAATGGCATCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR GCA 90 bp GCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGCTCAGAAAGGCTGCTCAGGAACTaGACTCCAGCTGATGGCTGC +
Preference number: 4 (lower is better)
Translates to: ALSSRFHLYYTTEMQSSERLLRN*TPADGC
Trigger: GCAGCCATCAGCTGGAGTGCAGTTCCTGAGCAGCCT...TTCTGAGCTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR GCA 90 bp TGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCAAACATTTCCTTTGTCCCTTGCAATTCTaGTTAGCAGCTTCTGGAATG +
Preference number: 4 (lower is better)
Translates to: WRKAVQDEGSCYQSKHFLCPLQF*LAASGM
Trigger: CATTCCAGAAGCTGCTAAGCAGAATTGCAAGGGACA...AAGGAAATGTTTGCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR GCA 90 bp ACAGCAAGGCTGATCTTCAAACTCAAGCATCGGAATGATGGAGGCATCCCCACAGGCTGTTTCCTTTGTTaGCTTCATTCTTTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: TARLIFKLKHRNDGGIPTGCFLC*LHSLLA
Trigger: AGCCAGCAAAGAATGAAGGCAACAAAGGAAACAGCC...TGTGGGGATGCCTCCATCATTCCGATGCTTGAGTTTGAAGATCAGCCTTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR CCA 90 bp ACAGCAAGGCTGATCTTCAAACTCAAGCATCGGAATGATGGAGGCATCCCCACATTTATGAAGACCACCTaGCCATCGACCTTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: TARLIFKLKHRNDGGIPTFMKTT*PSTFRK
Trigger: TTTCCTGAAGGTCGATGGCCAGGTGGTCTTCATAAA...TGTGGGGATGCCTCCATCATTCCGATGCTTGAGTTTGAAGATCAGCCTTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568001.5
CDS-3UTR CCA 90 bp TGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCAAACATTTCCTTTCCCCACAGGGTGTATaGCTGGAGAAAAACACAAAA +
Preference number: 4 (lower is better)
Translates to: WRKAVQDEGSCYQSKHFLSPQGV*LEKNTK
Trigger: TTTTGTGTTTTTCTCCAGCCATACACCCTGTGGGGA...AAGGAAATGTTTGCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp CTCAAGCATCGGAATGATGGAGGCATCCCCACAGGGTGTATGGCTGGAGAAAAATCTACTGATGAGTTGTaGGCCCAATTTCTGAAGACA +
Preference number: 4 (lower is better)
Translates to: LKHRNDGGIPTGCMAGEKSTDEL*AQFLKT
Trigger: TGTCTTCAGAAATTGGGCCCACAACTCATCAGTAGA...TTTTTCTCCAGCCATACACCCTGTGGGGATGCCTCCATCATTCCGATGCTTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR CCA 90 bp TGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCAAACATTTCCTTCTCCAGGTACACACTTaGCTCCAGTTCTATAAACGT +
Preference number: 4 (lower is better)
Translates to: WRKAVQDEGSCYQSKHFLLQVHT*LQFYKR
Trigger: ACGTTTATAGAACTGGAGCCAAGTGTGTACCTGGAG...AAGGAAATGTTTGCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp GGTGTATGGCTGGAGAAAAACACAAAAATGAGGTCTCGTCTAAGTTTCCACACTCACCCTGAGGGAGTGTaGCCACTTGTCCCTTGCAAT +
Preference number: 4 (lower is better)
Translates to: GVWLEKNTKMRSRLSFHTHPEGV*PLVPCN
Trigger: ATTGCAAGGGACAAGTGGCCACACTCCCTCAGGGTG...AGTGTGGAAACTTAGACGAGACCTCATTTTTGTGTTTTTCTCCAGCCATACACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR CCA 90 bp TCCATCTGTATTACACAACAGAGATGCAAAGCTCAGAAAGAATGTTCCCTGATTACAAGTAATGGTCTGTaGCTCTGGGGCTGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: SICITQQRCKAQKECSLITSNGL*LWGWGP
Trigger: GGGCCCCCAGCCCCAGAGCCACAGACCATTACTTGT...AATCAGGGAACATTCTTTCTGAGCTTTGCATCTCTGTTGTGTAATACAGATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR CCA 90 bp ACAGACACAGGGAAGAAGGCCATGCGAGACACAGACACAGAAGGCCATGTGAAGCAGGGACTGGTTTCATaGAAGATAATTTTTCCACAG +
Preference number: 4 (lower is better)
Translates to: TDTGKKAMRDTDTEGHVKQGLVS*KIIFPQ
Trigger: CTGTGGAAAAATTATCTTCCATGAAACCAGTCCCTG...CTTCACATGGCCTTCTGTGTCTGTGTCTCGCATGGCCTTCTTCCCTGTGTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR CCA 90 bp CAGGGTGTATGGCTGGAGAAAAACACAAAAATGAGGTCTCGTCTAAGTTTCCACGCCAACTGGAGTTGGTaGAGAAGGTACCGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: QGVWLEKNTKMRSRLSFHANWSW*RRYRSS
Trigger: GGAAGAACGGTACCTTCTCCACCAACTCCAGTTGGC...GTGGAAACTTAGACGAGACCTCATTTTTGTGTTTTTCTCCAGCCATACACCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000568001.5
CDS-3UTR TCA 90 bp AAGATGAAATCAGACTGGATTAGGGCAGGCCCTAAATCCAATTACTGGGGTCCTAACTCCTTCTGGCTATaGCCTCAGCATGGCTATCAT +
Preference number: 4 (lower is better)
Translates to: KMKSDWIRAGPKSNYWGPNSFWL*PQHGYH
Trigger: ATGATAGCCATGCTGAGGTCATAGCCAGAAGGAGTT...AGGACCCCAGTAATTGGATTTAGGGCCTGCCCTAATCCAGTCTGATTTCATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR TCA 90 bp AGATCAAAACAGAAAGCCTTTCCTGATACCTCTGAGAACAAGTCCAGGGCAGTCAACTCCTTCTGGCTATaGCCTCAGCATGGCTATCAT +
Preference number: 4 (lower is better)
Translates to: RSKQKAFPDTSENKSRAVNSFWL*PQHGYH
Trigger: ATGATAGCCATGCTGAGGTCATAGCCAGAAGGAGTT...GACTGCCCTGGACTTGTTCTCAGAGGTATCAGGAAAGGCTTTCTGTTTTGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000566445.5
CDS-3UTR TCA 90 bp GTGAGATGCCATTTTAGCAGAGAGCTACTTCAATCAAGTATAGCTTGCTCTAAGACTCAAGCATCGGAATaGTGGAGGCATCCCCACAGG +
Preference number: 4 (lower is better)
Translates to: VRCHFSRELLQSSIACSKTQASE*WRHPHR
Trigger: CCTGTGGGGATGCCTCCATCATTCCGATGCTTGAGT...CTTAGAGCAAGCTATACTTGATTGAAGTAGCTCTCTGCTAAAATGGCATCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR TCA 90 bp AGATCAAAACAGAAAGCCTTTCCTGATACCTCTGAGAACAAGTCCAGGGCAGTCACAGGACAGCAAGGCTaGTCTTCAAACTCAAGCATC +
Preference number: 4 (lower is better)
Translates to: RSKQKAFPDTSENKSRAVTGQQG*SSNSSI
Trigger: GATGCTTGAGTTTGAAGATCAGCCTTGCTGTCCTGT...GACTGCCCTGGACTTGTTCTCAGAGGTATCAGGAAAGGCTTTCTGTTTTGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000566445.5
CDS-3UTR TCA 90 bp CTGATCTTCAAACTCAAGCATCGGAATGATGGAGGCATCCCCACAGGGTGTATGATTTGGGATCTTGCCTaGAGGCTTCCAATTGTTTTC +
Preference number: 4 (lower is better)
Translates to: LIFKLKHRNDGGIPTGCMIWDLA*RLPIVF
Trigger: GAAAACAATTGGAAGCCTTCAGGCAAGATCCCAAAT...CATACACCCTGTGGGGATGCCTCCATCATTCCGATGCTTGAGTTTGAAGATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR TCA 90 bp TCTGAGGCACAGAGCAGGATCACTGAAGAATGGGAAAAGAATGGCTCCCTGAAGCCCCCTCCTAGATCTTaGAAACTTGAAGAACTTCTT +
Preference number: 4 (lower is better)
Translates to: SEAQSRITEEWEKNGSLKPPPRS*KLEELL
Trigger: AAGAAGTTCTTCAAGTTTTCAAGATCTAGGAGGGGG...CTTCAGGGAGCCATTCTTTTCCCATTCTTCAGTGATCCTGCTCTGTGCCTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR TCA 90 bp CTTGCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGCTCATGGCCAGGATGGTCTTaGTCTCCTGACGTCGTGATC +
Preference number: 4 (lower is better)
Translates to: LALSSRFHLYYTTEMQSSWPGWS*SPDVVI
Trigger: GATCACGACGTCAGGAGATCAAGACCATCCTGGCCA...TGAGCTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR GCA 90 bp AAACTCAAGCATCGGAATGATGGAGGCATCCCCACAGGGTGTATGGCTGGAGAATTTTGGACTGTCCTATaGATTTTGTTCCTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: KLKHRNDGGIPTGCMAGEFWTVL*ILFLFP
Trigger: TGGGAACAGGAACAAAATGCATAGGACAGTCCAAAA...TTCTCCAGCCATACACCCTGTGGGGATGCCTCCATCATTCCGATGCTTGAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000566445.5
ENST00000568001.5
CDS-3UTR GCA 90 bp CCAATTTCTGAAGACAGGACAGCAAGGCTGATCTTCAAACTCAAGCATCGGAATCCAATCAGTGCTCTCTaGATGGCTTCCTGGCTGTAT +
Preference number: 4 (lower is better)
Translates to: PISEDRTARLIFKLKHRNPISAL*MASWLY
Trigger: ATACAGCCAGGAAGCCATGCAGAGAGCACTGATTGG...ATTCCGATGCTTGAGTTTGAAGATCAGCCTTGCTGTCCTGTCTTCAGAAATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR GCA 90 bp CCACAGGGTGTATGGCTGGAGAAAAACACAAAAATGAGGTCTCGTCTAAGTTTCACACCTTCCAATCAGTaGTCTCTGCATGGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: PQGVWLEKNTKMRSRLSFTPSNQ*SLHGFL
Trigger: CAGGAAGCCATGCAGAGAGCACTGATTGGAAGGTGT...GAAACTTAGACGAGACCTCATTTTTGTGTTTTTCTCCAGCCATACACCCTGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR GCA 90 bp CTTGAACTCCGAAGCCTTTTGGTAAAGCAGACACATTCTGACACCTTCCAATCATTGCCTGCACCGCACTaGGGCTCTGTTCAAATAGTA +
Preference number: 4 (lower is better)
Translates to: LELRSLLVKQTHSDTFQSLPAPH*GSVQIV
Trigger: TACTATTTGAACAGAGCCGCAGTGCGGTGCAGGCAA...TGATTGGAAGGTGTCAGAATGTGTCTGCTTTACCAAAAGGCTTCGGAGTTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR GCA 90 bp AGAGAGCTACTTCAATCAAGTATAGCTTGCTCTAAGTTCCAGATTCCATCTGTATCAGCCCTTTTTGCCTaGACCGCACTGCGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: RELLQSSIACSKFQIPSVSALFA*TALRLC
Trigger: ACAGAGCCGCAGTGCGGTGCAGGCAAAAAGGGCTGA...TACAGATGGAATCTGGAACTTAGAGCAAGCTATACTTGATTGAAGTAGCTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR GCA 90 bp TGCCCTAAAGCTTTTAGAGGAAGCAGAAGCCCCACCAACAACCTGTTTGGACTTGCTGATTTGGGATCTTaGCTGAAGGCTTCCAATTGT +
Preference number: 4 (lower is better)
Translates to: CPKAFRGSRSPTNNLFGLADLGS*LKASNC
Trigger: ACAATTGGAAGCCTTCAGGCAAGATCCCAAATCAGC...AAGTCCAAACAGGTTGTTGGTGGGGCTTCTGCTTCCTCTAAAAGCTTTAGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR GCA 90 bp CCCACCAACAACCTGTTTGGACTTCTAGCCTCCAGAACTGAAAGGGGATACAGTCCCATAAAACAGAGCTaGTGCAGAGTACTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: PTNNLFGLLASRTERGYSPIKQS*CRVLSK
Trigger: CTTTGAAAGTACTCTGCAGCAGCTCTGTTTTATGGG...ACTGTATCCCCTTTCAGTTCTGGAGGCTAGAAGTCCAAACAGGTTGTTGGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR CCA 90 bp CCCACAGGGTGTATGGCTGGAGAAAAACACAAAAATGAGGTCTCGTCTAAGTTTGCAGGCCTTGTCAGCTaGAGATTGTATCTTCACCAC +
Preference number: 4 (lower is better)
Translates to: PTGCMAGEKHKNEVSSKFAGLVS*RLYLHH
Trigger: GTGGTGAAGATACAATCTCCAGCTGACAAGGCCTGC...AAACTTAGACGAGACCTCATTTTTGTGTTTTTCTCCAGCCATACACCCTGTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000566445.5
ENST00000568001.5
CDS-3UTR CCA 90 bp CAGGGTGTATGGCTGGAGAAAAACACAAAAATGAGGTCTCGTCTAAGTTTCCACTATCCTCTTTCAGGGTaGCTGCCAACTGGAGTTGGT +
Preference number: 4 (lower is better)
Translates to: QGVWLEKNTKMRSRLSFHYPLSG*LPTGVG
Trigger: ACCAACTCCAGTTGGCAGCCACCCTGAAAGAGGATA...GTGGAAACTTAGACGAGACCTCATTTTTGTGTTTTTCTCCAGCCATACACCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000566445.5
ENST00000568001.5
CDS-3UTR CCA 90 bp CCCACCAACAACCTGTTTGGACTTCTAGCCTCCAGAACTGAAAGGGGATACAGTTCTACTGATGAGTTGTaGGCCCAATTTCTGAAGACA +
Preference number: 4 (lower is better)
Translates to: PTNNLFGLLASRTERGYSSTDEL*AQFLKT
Trigger: TGTCTTCAGAAATTGGGCCCACAACTCATCAGTAGA...ACTGTATCCCCTTTCAGTTCTGGAGGCTAGAAGTCCAAACAGGTTGTTGGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR CCA 90 bp GTCTCCAGCTTCTCCAGGTACACACTTGGCTCCAGTTCTATAAACGTCTATCACCTCCAGGTACACACTTaGCTCCAGTTCTATAAACGT +
Preference number: 4 (lower is better)
Translates to: VSSFSRYTLGSSSINVYHLQVHT*LQFYKR
Trigger: ACGTTTATAGAACTGGAGCCAAGTGTGTACCTGGAG...GTGATAGACGTTTATAGAACTGGAGCCAAGTGTGTACCTGGAGAAGCTGGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR CCA 90 bp GCTTGCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGCTCCAGCTGACAGGTAGATaGGCTCTTCCAGCAAGTGCA +
Preference number: 4 (lower is better)
Translates to: ACSKFQIPSVLHNRDAKLQLTGR*ALPASA
Trigger: TGCACTTGCTGGAAGAGCCCATCTACCTGTCAGCTG...GAGCTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGCAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp AGCAGAGAGCTACTTCAATCAAGTATAGCTTGCTCTAAGTTCCAGATTCCATCTGGCTTCCTGGCTGTATaGGCACTTCCCAATGACCAC +
Preference number: 4 (lower is better)
Translates to: SRELLQSSIACSKFQIPSGFLAV*ALPNDH
Trigger: GTGGTCATTGGGAAGTGCCCATACAGCCAGGAAGCC...AGATGGAATCTGGAACTTAGAGCAAGCTATACTTGATTGAAGTAGCTCTCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp GCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGCTCAGAACTCTGCATGGCTTCCTaGCTGTATGGGCACTTCCCA +
Preference number: 4 (lower is better)
Translates to: ALSSRFHLYYTTEMQSSELCMAS*LYGHFP
Trigger: TGGGAAGTGCCCATACAGCCAGGAAGCCATGCAGAG...TTCTGAGCTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp GCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGCTCAGAATCAGTGCTCTCTGCATaGCTTCCTGGCTGTATGGGC +
Preference number: 4 (lower is better)
Translates to: ALSSRFHLYYTTEMQSSESVLSA*LPGCMG
Trigger: GCCCATACAGCCAGGAAGCCATGCAGAGAGCACTGA...TTCTGAGCTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp TGCCCTAAAGCTTTTAGAGGAAGCAGAAGCCCCACCAACAACCTGTTTGGACTTAGGATCACTGAAGAATaGGAAAAGAATGGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: CPKAFRGSRSPTNNLFGLRITEE*EKNGSL
Trigger: CAGGGAGCCATTCTTTTCCCATTCTTCAGTGATCCT...AAGTCCAAACAGGTTGTTGGTGGGGCTTCTGCTTCCTCTAAAAGCTTTAGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR TCA 90 bp CTTGCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGCTCACCTTCTTGGGCAGCCTaGTCCCATAGTGTTCATAGC +
Preference number: 4 (lower is better)
Translates to: LALSSRFHLYYTTEMQSSPSWAA*SHSVHS
Trigger: GCTATGAACACTATGGGATCAGGCTGCCCAAGAAGG...TGAGCTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR TCA 90 bp CAGGGTGTATGGCTGGAGAAAAACACAAAAATGAGGTCTCGTCTAAGTTTCCACACAGGACAGCAAGGCTaGTCTTCAAACTCAAGCATC +
Preference number: 4 (lower is better)
Translates to: QGVWLEKNTKMRSRLSFHTGQQG*SSNSSI
Trigger: GATGCTTGAGTTTGAAGATCAGCCTTGCTGTCCTGT...GTGGAAACTTAGACGAGACCTCATTTTTGTGTTTTTCTCCAGCCATACACCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000566445.5
ENST00000568001.5
CDS-3UTR TCA 90 bp AGCAGAGAGCTACTTCAATCAAGTATAGCTTGCTCTAAGTTCCAGATTCCATCTTGTGGGCCCAATTTCTaGAGACAGGACAGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: SRELLQSSIACSKFQIPSCGPNF*RQDSKA
Trigger: AGCCTTGCTGTCCTGTCTTCAGAAATTGGGCCCACA...AGATGGAATCTGGAACTTAGAGCAAGCTATACTTGATTGAAGTAGCTCTCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR TCA 90 bp ATAGCTTGCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGCCAGTCCCTCTACAGTaGGATCACAGCTGTGGATGC +
Preference number: 4 (lower is better)
Translates to: IACSKFQIPSVLHNRDAKPVPLQ*DHSCGC
Trigger: GCATCCACAGCTGTGATCTCACTGTAGAGGGACTGG...CTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGCAAGCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR TCA 90 bp GCTTGCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGCTCAATCCGGTGGGTTTCTaGTCCAGGATCCAAACACCT +
Preference number: 4 (lower is better)
Translates to: ACSKFQIPSVLHNRDAKLNPVGF*SRIQTP
Trigger: AGGTGTTTGGATCCTGGATCAGAAACCCACCGGATT...GAGCTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGCAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR TCA 90 bp TGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCAAACATTTCCTTGTGTTACTAGATCTTTaGTTCTCTTGGCTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: WRKAVQDEGSCYQSKHFLVLLDL*FSWLFP
Trigger: AGGAAACAGCCAAGAGAATCAAAGATCTAGTAACAC...AAGGAAATGTTTGCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000566445.5
CDS-3UTR GCA 90 bp CTTGAACTCCGAAGCCTTTTGGTAAAGCAGACACATTCTGACACCTTCCAATCAGGCCACTTTTCTGCTTaGCAAAACTCTGATGGTGAG +
Preference number: 4 (lower is better)
Translates to: LELRSLLVKQTHSDTFQSGHFSA*QNSDGE
Trigger: CTCACCATCAGAGTTTTGGCAAGCAGAAAAGTGGCC...TGATTGGAAGGTGTCAGAATGTGTCTGCTTTACCAAAAGGCTTCGGAGTTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR GCA 90 bp GTGAGGTCATTAGTGAGATGCCATTTTAGCAGAGAGCTACTTCAATCAAGTATAGATCACAGCTGTGGATaGCTGGTGAGATTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: VRSLVRCHFSRELLQSSIDHSCG*LVRLGH
Trigger: GTGGCCCAATCTCACCAGGCATCCACAGCTGTGATC...TATACTTGATTGAAGTAGCTCTCTGCTAAAATGGCATCTCACTAATGACCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000566445.5
CDS-3UTR GCA 90 bp TCCATCTGTATTACACAACAGAGATGCAAAGCTCAGAAAGAATGTTCCCTGATTCAAGTGCATCAACAGTaGCCCTTGGCATCCGAGGAC +
Preference number: 4 (lower is better)
Translates to: SICITQQRCKAQKECSLIQVHQQ*PLASED
Trigger: GTCCTCGGATGCCAAGGGGCACTGTTGATGCACTTG...AATCAGGGAACATTCTTTCTGAGCTTTGCATCTCTGTTGTGTAATACAGATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR GCA 90 bp ATAGCTTGCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGCAGGATCCAAACACCTaGTTCCGGAGTGTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: IACSKFQIPSVLHNRDAKQDPNT*FRSVLQ
Trigger: CTGGAGCACACTCCGGAAGCAGGTGTTTGGATCCTG...CTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGCAAGCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR GCA 90 bp TCCATCTGTATTACACAACAGAGATGCAAAGCTCAGAAAGAATGTTCCCTGATTCAGGATCCAAACACCTaGTTCCGGAGTGTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SICITQQRCKAQKECSLIQDPNT*FRSVLQ
Trigger: CTGGAGCACACTCCGGAAGCAGGTGTTTGGATCCTG...AATCAGGGAACATTCTTTCTGAGCTTTGCATCTCTGTTGTGTAATACAGATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR GCA 90 bp CCACAGGGTGTATGGCTGGAGAAAAACACAAAAATGAGGTCTCGTCTAAGTTTCCAGGATGAAGGGTCCTaGTACCAGAGCAAACATTTC +
Preference number: 4 (lower is better)
Translates to: PQGVWLEKNTKMRSRLSFQDEGS*YQSKHF
Trigger: GAAATGTTTGCTCTGGTAGCAGGACCCTTCATCCTG...GAAACTTAGACGAGACCTCATTTTTGTGTTTTTCTCCAGCCATACACCCTGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR GCA 90 bp GCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGCTCAGAAAGGTGTGCGCCACCATaGCCGGCTAGTTTTTGCATT +
Preference number: 4 (lower is better)
Translates to: ALSSRFHLYYTTEMQSSERCAPP*PASFCI
Trigger: AATGCAAAAACTAGCCGGGCATGGTGGCGCACACCT...TTCTGAGCTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000566445.5
CDS-3UTR GCA 90 bp AAGATGAAATCAGACTGGATTAGGGCAGGCCCTAAATCCAATTACTGGGGTCCTCTATTGCTGATTTGCTaGAGGGCCTTTTGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: KMKSDWIRAGPKSNYWGPLLLIC*RAFWLL
Trigger: AAGAAGCCAAAAGGCCCTGCAGCAAATCAGCAATAG...AGGACCCCAGTAATTGGATTTAGGGCCTGCCCTAATCCAGTCTGATTTCATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR CCA 90 bp AGCAGAGAGCTACTTCAATCAAGTATAGCTTGCTCTAAGTTCCAGATTCCATCTCATCCGCGGTCCACATaGTCTGAGCTGGTATTGAGA +
Preference number: 4 (lower is better)
Translates to: SRELLQSSIACSKFQIPSHPRST*SELVLR
Trigger: TCTCAATACCAGCTCAGACCATGTGGACCGCGGATG...AGATGGAATCTGGAACTTAGAGCAAGCTATACTTGATTGAAGTAGCTCTCTGCT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp CTTTGTTGTTCCCTGTGGAAAGCCATTGGCAGTAACATCCAAAGGCTGCTCAGGCGTTCTTCCTCATTTTaGACTGTCCTATGCATTTTG +
Preference number: 4 (lower is better)
Translates to: LCCSLWKAIGSNIQRLLRRSSSF*TVLCIL
Trigger: CAAAATGCATAGGACAGTCCAAAATGAGGAAGAACG...CCTGAGCAGCCTTTGGATGTTACTGCCAATGGCTTTCCACAGGGAACAACAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR CCA 90 bp CTTGAACTCCGAAGCCTTTTGGTAAAGCAGACACATTCTGACACCTTCCAATCAGCCAACTGGAGTTGGTaGAGAAGGTACCTTTGGAAA +
Preference number: 4 (lower is better)
Translates to: LELRSLLVKQTHSDTFQSANWSW*RRYLWK
Trigger: TTTCCAAAGGTACCTTCTCCACCAACTCCAGTTGGC...TGATTGGAAGGTGTCAGAATGTGTCTGCTTTACCAAAAGGCTTCGGAGTTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR CCA 90 bp TCCATCTGTATTACACAACAGAGATGCAAAGCTCAGAAAGAATGTTCCCTGATTTCAGTGCTCTCTGCATaGCTTCCTGGCTGTATGGGC +
Preference number: 4 (lower is better)
Translates to: SICITQQRCKAQKECSLISVLSA*LPGCMG
Trigger: GCCCATACAGCCAGGAAGCCATGCAGAGAGCACTGA...AATCAGGGAACATTCTTTCTGAGCTTTGCATCTCTGTTGTGTAATACAGATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp AGATCAAAACAGAAAGCCTTTCCTGATACCTCTGAGAACAAGTCCAGGGCAGTCCTTTGTTGTTCCCTGTaGAAAGCCATTGGCAGTAAC +
Preference number: 4 (lower is better)
Translates to: RSKQKAFPDTSENKSRAVLCCSL*KAIGSN
Trigger: GTTACTGCCAATGGCTTTCCACAGGGAACAACAAAG...GACTGCCCTGGACTTGTTCTCAGAGGTATCAGGAAAGGCTTTCTGTTTTGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp TCCATCTGTATTACACAACAGAGATGCAAAGCTCAGAAAGAATGTTCCCTGATTCACCCTGAGGGAGTGTaGCCACTTGTCCCTTGCAAT +
Preference number: 4 (lower is better)
Translates to: SICITQQRCKAQKECSLIHPEGV*PLVPCN
Trigger: ATTGCAAGGGACAAGTGGCCACACTCCCTCAGGGTG...AATCAGGGAACATTCTTTCTGAGCTTTGCATCTCTGTTGTGTAATACAGATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp AGCAGAGAGCTACTTCAATCAAGTATAGCTTGCTCTAAGTTCCAGATTCCATCTGGCTTCAGCGATGCTTaGAGGAAGGGACTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: SRELLQSSIACSKFQIPSGFSDA*RKGLWF
Trigger: AAACCAGAGTCCCTTCCTCCAAGCATCGCTGAAGCC...AGATGGAATCTGGAACTTAGAGCAAGCTATACTTGATTGAAGTAGCTCTCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR CCA 90 bp CCAATTTCTGAAGACAGGACAGCAAGGCTGATCTTCAAACTCAAGCATCGGAATAGCCTGGCCACCTTTTaGCTTTTTGGACAGAACTCT +
Preference number: 4 (lower is better)
Translates to: PISEDRTARLIFKLKHRNSLATF*LFGQNS
Trigger: AGAGTTCTGTCCAAAAAGCCAAAAGGTGGCCAGGCT...ATTCCGATGCTTGAGTTTGAAGATCAGCCTTGCTGTCCTGTCTTCAGAAATTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR CCA 90 bp GCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGCTCAGAAACTACCTCCGCCTCCTaGGTTCAAGCAATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: ALSSRFHLYYTTEMQSSETTSAS*VQAILL
Trigger: CAGGAGAATTGCTTGAACCCAGGAGGCGGAGGTAGT...TTCTGAGCTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000566445.5
CDS-3UTR TCA 90 bp GTGAGATGCCATTTTAGCAGAGAGCTACTTCAATCAAGTATAGCTTGCTCTAAGCAGCATGGCTATCATTaGGGATGTCTCCGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: VRCHFSRELLQSSIACSKQHGYH*GCLRSS
Trigger: GGAAGAACGGAGACATCCTCAATGATAGCCATGCTG...CTTAGAGCAAGCTATACTTGATTGAAGTAGCTCTCTGCTAAAATGGCATCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307921.7
ENST00000564657.2
CDS-3UTR TCA 90 bp CCACAGGGTGTATGGCTGGAGAAAAACACAAAAATGAGGTCTCGTCTAAGTTTCTTCCACACTCCTTTTTaGGTTCCTGGGACAAAGATG +
Preference number: 4 (lower is better)
Translates to: PQGVWLEKNTKMRSRLSFFHTPF*VPGTKM
Trigger: CATCTTTGTCCCAGGAACTCAAAAAGGAGTGTGGAA...GAAACTTAGACGAGACCTCATTTTTGTGTTTTTCTCCAGCCATACACCCTGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000566445.5
ENST00000568001.5
CDS-3UTR TCA 90 bp GTGAGATGCCATTTTAGCAGAGAGCTACTTCAATCAAGTATAGCTTGCTCTAAGAATCCGGTGGGTTTCTaGTCCAGGATCCAAACACCT +
Preference number: 4 (lower is better)
Translates to: VRCHFSRELLQSSIACSKNPVGF*SRIQTP
Trigger: AGGTGTTTGGATCCTGGATCAGAAACCCACCGGATT...CTTAGAGCAAGCTATACTTGATTGAAGTAGCTCTCTGCTAAAATGGCATCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR TCA 90 bp ATAGCTTGCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGAGGGAGAAACTGAAGTaGTGCAGCCACAAGCCAAGG +
Preference number: 4 (lower is better)
Translates to: IACSKFQIPSVLHNRDAKREKLK*CSHKPR
Trigger: CCTTGGCTTGTGGCTGCATCACTTCAGTTTCTCCCT...CTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGCAAGCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR GCA 90 bp TCAAGTATAGCTTGCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATACTCTGATGGTGAGCTaGTCCGTTGGTGACCTCCCT +
Preference number: 4 (lower is better)
Translates to: SSIACSKFQIPSVLHNRDTLMVS*SVGDLP
Trigger: AGGGAGGTCACCAACGGAGCAGCTCACCATCAGAGT...ATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGCAAGCTATACTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR GCA 90 bp TCAAGTATAGCTTGCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGGCTCTTCCAGCAAGTaGATCAACAGTGCCCCTTGG +
Preference number: 4 (lower is better)
Translates to: SSIACSKFQIPSVLHNRDGSSSK*INSAPW
Trigger: CCAAGGGGCACTGTTGATGCACTTGCTGGAAGAGCC...ATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGCAAGCTATACTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR GCA 90 bp AGCAGAGAGCTACTTCAATCAAGTATAGCTTGCTCTAAGTTCCAGATTCCATCTTTGCCTGCACCGCACTaGGGCTCTGTTCAAATAGTA +
Preference number: 4 (lower is better)
Translates to: SRELLQSSIACSKFQIPSLPAPH*GSVQIV
Trigger: TACTATTTGAACAGAGCCGCAGTGCGGTGCAGGCAA...AGATGGAATCTGGAACTTAGAGCAAGCTATACTTGATTGAAGTAGCTCTCTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR GCA 90 bp CCCACCAACAACCTGTTTGGACTTCTAGCCTCCAGAACTGAAAGGGGATACAGTATAAAACAGAGCTGCTaGAGAGTACTTTCAAAGCAT +
Preference number: 4 (lower is better)
Translates to: PTNNLFGLLASRTERGYSIKQSC*RVLSKH
Trigger: ATGCTTTGAAAGTACTCTGCAGCAGCTCTGTTTTAT...ACTGTATCCCCTTTCAGTTCTGGAGGCTAGAAGTCCAAACAGGTTGTTGGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR GCA 90 bp ATCTTCAAACTCAAGCATCGGAATGATGGAGGCATCCCCACAGGGTGTATGGCTATAAAACAGAGCTGCTaGAGAGTACTTTCAAAGCAT +
Preference number: 4 (lower is better)
Translates to: IFKLKHRNDGGIPTGCMAIKQSC*RVLSKH
Trigger: ATGCTTTGAAAGTACTCTGCAGCAGCTCTGTTTTAT...AGCCATACACCCTGTGGGGATGCCTCCATCATTCCGATGCTTGAGTTTGAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR GCA 90 bp TCTATAAACGTCTATCACTTTGGCACTACCAGGGGCTATTCTGGTGACAGTAGCCCCATAAAACAGAGCTaGTGCAGAGTACTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: SINVYHFGTTRGYSGDSSPIKQS*CRVLSK
Trigger: CTTTGAAAGTACTCTGCAGCAGCTCTGTTTTATGGG...GCTACTGTCACCAGAATAGCCCCTGGTAGTGCCAAAGTGATAGACGTTTATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR GCA 90 bp TGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCAAACATTTCCTTCAAAGCTGTAAAACTTaGAGAGCGTCAAACATCATT +
Preference number: 4 (lower is better)
Translates to: WRKAVQDEGSCYQSKHFLQSCKT*RASNII
Trigger: AATGATGTTTGACGCTCTGCAAGTTTTACAGCTTTG...AAGGAAATGTTTGCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp GTGAGATGCCATTTTAGCAGAGAGCTACTTCAATCAAGTATAGCTTGCTCTAAGTGTCCACTCATGGTTTaGCTCAGGCTTCCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: VRCHFSRELLQSSIACSKCPLMV*LRLPLL
Trigger: AAGAAGGGGAAGCCTGAGCCAAACCATGAGTGGACA...CTTAGAGCAAGCTATACTTGATTGAAGTAGCTCTCTGCTAAAATGGCATCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp CTTGAACTCCGAAGCCTTTTGGTAAAGCAGACACATTCTGACACCTTCCAATCATGGAGAAGGTACCTTTaGAAACTCCTTCTGGCTATG +
Preference number: 4 (lower is better)
Translates to: LELRSLLVKQTHSDTFQSWRRYL*KLLLAM
Trigger: CATAGCCAGAAGGAGTTTCCAAAGGTACCTTCTCCA...TGATTGGAAGGTGTCAGAATGTGTCTGCTTTACCAAAAGGCTTCGGAGTTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR CCA 90 bp CCCACAGGGTGTATGGCTGGAGAAAAACACAAAAATGAGGTCTCGTCTAAGTTTTCCCCACAGGGTGTATaGCTGGAGAAAAACACAAAA +
Preference number: 4 (lower is better)
Translates to: PTGCMAGEKHKNEVSSKFSPQGV*LEKNTK
Trigger: TTTTGTGTTTTTCTCCAGCCATACACCCTGTGGGGA...AAACTTAGACGAGACCTCATTTTTGTGTTTTTCTCCAGCCATACACCCTGTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 2 transcripts:
ENST00000566445.5
ENST00000568001.5
CDS-3UTR CCA 90 bp CCCACAGGGTGTATGGCTGGAGAAAAACACAAAAATGAGGTCTCGTCTAAGTTTCAAGCCTCATCTTTTTaGTTACAGGACTGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: PTGCMAGEKHKNEVSSKFQASSF*LQDCQG
Trigger: ACCCTGACAGTCCTGTAACCAAAAAGATGAGGCTTG...AAACTTAGACGAGACCTCATTTTTGTGTTTTTCTCCAGCCATACACCCTGTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR CCA 90 bp ATAGCTTGCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGATCAACAGTGCCCCTTaGCATCCGAGGACGTTCCAT +
Preference number: 4 (lower is better)
Translates to: IACSKFQIPSVLHNRDAKINSAP*HPRTFH
Trigger: ATGGAACGTCCTCGGATGCCAAGGGGCACTGTTGAT...CTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGCAAGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp ATAGCTTGCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGCAGCTGACAGGTAGATaGGCTCTTCCAGCAAGTGCA +
Preference number: 4 (lower is better)
Translates to: IACSKFQIPSVLHNRDAKQLTGR*ALPASA
Trigger: TGCACTTGCTGGAAGAGCCCATCTACCTGTCAGCTG...CTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGCAAGCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp GTGAGATGCCATTTTAGCAGAGAGCTACTTCAATCAAGTATAGCTTGCTCTAAGAGGAACAAGTCGACCTaGGCTATCAGCCCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: VRCHFSRELLQSSIACSKRNKST*AISPFC
Trigger: GCAAAAAGGGCTGATAGCCCAGGTCGACTTGTTCCT...CTTAGAGCAAGCTATACTTGATTGAAGTAGCTCTCTGCTAAAATGGCATCTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp CCAAGCCTGGCCACCTTTTGGCTTTTTGGACAGAACTCTTTCAATTGTAAGTCACTTATAAGTAGGCCATaGAAAGACACAGACACAGGG +
Preference number: 4 (lower is better)
Translates to: PSLATFWLFGQNSFNCKSLISRP*KDTDTG
Trigger: CCCTGTGTCTGTGTCTTTCCATGGCCTACTTATAAG...TGACTTACAATTGAAAGAGTTCTGTCCAAAAAGCCAAAAGGTGGCCAGGCTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR CCA 90 bp TCTGAGGCACAGAGCAGGATCACTGAAGAATGGGAAAAGAATGGCTCCCTGAAGAATGTTTTGCTACACTaGGTCCATTATAATTCGAGC +
Preference number: 4 (lower is better)
Translates to: SEAQSRITEEWEKNGSLKNVLLH*VHYNSS
Trigger: GCTCGAATTATAATGGACCCAGTGTAGCAAAACATT...CTTCAGGGAGCCATTCTTTTCCCATTCTTCAGTGATCCTGCTCTGTGCCTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR CCA 90 bp TCCATCTGTATTACACAACAGAGATGCAAAGCTCAGAAAGAATGTTCCCTGATTACTACCTCCGCCTCCTaGGTTCAAGCAATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: SICITQQRCKAQKECSLITTSAS*VQAILL
Trigger: CAGGAGAATTGCTTGAACCCAGGAGGCGGAGGTAGT...AATCAGGGAACATTCTTTCTGAGCTTTGCATCTCTGTTGTGTAATACAGATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000566445.5
3UTR CAA 72 bp CATTCGATGTTAAAACAGGATTGGCTGCTGGGTCTATaGCTGATTTGCTGCAGGGCCTTTTGGCTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: HSMLKQDWLLGL*LICCRAFWLLF
Trigger: AAAAAGAAGCCAAAAGGCCCTGCAGCAAATCAGCAATAGACCCAGCAGCCAATCCTGTTTTAACATCGAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR TCA 90 bp GTGAGATGCCATTTTAGCAGAGAGCTACTTCAATCAAGTATAGCTTGCTCTAAGAACTCCTTCTGGCTATaGCCTCAGCATGGCTATCAT +
Preference number: 4 (lower is better)
Translates to: VRCHFSRELLQSSIACSKNSFWL*PQHGYH
Trigger: ATGATAGCCATGCTGAGGTCATAGCCAGAAGGAGTT...CTTAGAGCAAGCTATACTTGATTGAAGTAGCTCTCTGCTAAAATGGCATCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR TCA 90 bp TTATGTGACCCTTACAGCTCCAGATCAAAACAGAAAGCCTTTCCTGATACCTCTTTCCACACTCCTTTTTaGGTTCCTGGGACAAAGATG +
Preference number: 4 (lower is better)
Translates to: LCDPYSSRSKQKAFPDTSFHTPF*VPGTKM
Trigger: CATCTTTGTCCCAGGAACTCAAAAAGGAGTGTGGAA...AGAGGTATCAGGAAAGGCTTTCTGTTTTGATCTGGAGCTGTAAGGGTCACATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000566445.5
CDS-3UTR TCA 90 bp TCAAGTATAGCTTGCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATTGTGGGCCCAATTTCTaGAGACAGGACAGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: SSIACSKFQIPSVLHNRDCGPNF*RQDSKA
Trigger: AGCCTTGCTGTCCTGTCTTCAGAAATTGGGCCCACA...ATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGCAAGCTATACTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR TCA 90 bp GGTGTATGGCTGGAGAAAAACACAAAAATGAGGTCTCGTCTAAGTTTCCACACTAGAGTTCCACTTTGCTaGTTTGGGATCTTGCCTGAA +
Preference number: 4 (lower is better)
Translates to: GVWLEKNTKMRSRLSFHTRVPLC*FGILPE
Trigger: TTCAGGCAAGATCCCAAATCAGCAAAGTGGAACTCT...AGTGTGGAAACTTAGACGAGACCTCATTTTTGTGTTTTTCTCCAGCCATACACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR TCA 90 bp CTTGCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGCTCAAGTCCCATGATTATGTaGCCCTTACAGCTCCAGATC +
Preference number: 4 (lower is better)
Translates to: LALSSRFHLYYTTEMQSSSPMIM*PLQLQI
Trigger: GATCTGGAGCTGTAAGGGTCACATAATCATGGGACT...TGAGCTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000566445.5
CDS-3UTR GCA 90 bp AGATCAAAACAGAAAGCCTTTCCTGATACCTCTGAGAACAAGTCCAGGGCAGTCTTTTGGACTGTCCTATaGATTTTGTTCCTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: RSKQKAFPDTSENKSRAVFWTVL*ILFLFP
Trigger: TGGGAACAGGAACAAAATGCATAGGACAGTCCAAAA...GACTGCCCTGGACTTGTTCTCAGAGGTATCAGGAAAGGCTTTCTGTTTTGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000566445.5
CDS-3UTR GCA 90 bp CTTGCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGCTCAGGCCACTTTTCTGCTTaGCAAAACTCTGATGGTGAG +
Preference number: 4 (lower is better)
Translates to: LALSSRFHLYYTTEMQSSGHFSA*QNSDGE
Trigger: CTCACCATCAGAGTTTTGGCAAGCAGAAAAGTGGCC...TGAGCTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR GCA 90 bp ATAGCTTGCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGTTGCCTGCACCGCACTaGGGCTCTGTTCAAATAGTA +
Preference number: 4 (lower is better)
Translates to: IACSKFQIPSVLHNRDAKLPAPH*GSVQIV
Trigger: TACTATTTGAACAGAGCCGCAGTGCGGTGCAGGCAA...CTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGCAAGCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR GCA 90 bp GGTGTATGGCTGGAGAAAAACACAAAAATGAGGTCTCGTCTAAGTTTCCACACTGCTGATTTGGGATCTTaGCTGAAGGCTTCCAATTGT +
Preference number: 4 (lower is better)
Translates to: GVWLEKNTKMRSRLSFHTADLGS*LKASNC
Trigger: ACAATTGGAAGCCTTCAGGCAAGATCCCAAATCAGC...AGTGTGGAAACTTAGACGAGACCTCATTTTTGTGTTTTTCTCCAGCCATACACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR CCA 90 bp GCTTGCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGCTCTTTATGAAGACCACCTaGCCATCGACCTTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: ACSKFQIPSVLHNRDAKLFMKTT*PSTFRK
Trigger: TTTCCTGAAGGTCGATGGCCAGGTGGTCTTCATAAA...GAGCTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGCAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307921.7
CDS-3UTR CCA 90 bp AGAGAGCTACTTCAATCAAGTATAGCTTGCTCTAAGTTCCAGATTCCATCTGTATGTCCACTCATGGTTTaGCTCAGGCTTCCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: RELLQSSIACSKFQIPSVCPLMV*LRLPLL
Trigger: AAGAAGGGGAAGCCTGAGCCAAACCATGAGTGGACA...TACAGATGGAATCTGGAACTTAGAGCAAGCTATACTTGATTGAAGTAGCTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp TTATGTGACCCTTACAGCTCCAGATCAAAACAGAAAGCCTTTCCTGATACCTCTCAAGCCTCATCTTTTTaGTTACAGGACTGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: LCDPYSSRSKQKAFPDTSQASSF*LQDCQG
Trigger: ACCCTGACAGTCCTGTAACCAAAAAGATGAGGCTTG...AGAGGTATCAGGAAAGGCTTTCTGTTTTGATCTGGAGCTGTAAGGGTCACATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp GCTTGCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGCTCAAACGTCTATCACTTTaGCACTACCAGGGGCTATTC +
Preference number: 4 (lower is better)
Translates to: ACSKFQIPSVLHNRDAKLKRLSL*HYQGLF
Trigger: GAATAGCCCCTGGTAGTGCCAAAGTGATAGACGTTT...GAGCTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGCAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp TTATGTGACCCTTACAGCTCCAGATCAAAACAGAAAGCCTTTCCTGATACCTCTCTTTGTTGTTCCCTGTaGAAAGCCATTGGCAGTAAC +
Preference number: 4 (lower is better)
Translates to: LCDPYSSRSKQKAFPDTSLCCSL*KAIGSN
Trigger: GTTACTGCCAATGGCTTTCCACAGGGAACAACAAAG...AGAGGTATCAGGAAAGGCTTTCTGTTTTGATCTGGAGCTGTAAGGGTCACATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp AGAGAGCTACTTCAATCAAGTATAGCTTGCTCTAAGTTCCAGATTCCATCTGTACTGGTGATAATCCGGTaGGTTTCTGATCCAGGATCC +
Preference number: 4 (lower is better)
Translates to: RELLQSSIACSKFQIPSVLVIIR*VSDPGS
Trigger: GGATCCTGGATCAGAAACCCACCGGATTATCACCAG...TACAGATGGAATCTGGAACTTAGAGCAAGCTATACTTGATTGAAGTAGCTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp GTGAGGTCATTAGTGAGATGCCATTTTAGCAGAGAGCTACTTCAATCAAGTATAAAGACTTGTCCTGCGTaGAGGAAGGCAGTTCAGGAT +
Preference number: 4 (lower is better)
Translates to: VRSLVRCHFSRELLQSSIKTCPA*RKAVQD
Trigger: ATCCTGAACTGCCTTCCTCCACGCAGGACAAGTCTT...TATACTTGATTGAAGTAGCTCTCTGCTAAAATGGCATCTCACTAATGACCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000566445.5
CDS-3UTR TCA 90 bp CTTGCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGCTCAAAAAGAATGGCTCCCTaGAGAAAGAAAGGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: LALSSRFHLYYTTEMQSSKRMAP*RKKGWE
Trigger: TTCCCAGCCTTTCTTTCTTCAGGGAGCCATTCTTTT...TGAGCTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000566445.5
CDS-3UTR GCA 90 bp CTTGCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGCTCATGTCCCTTGCAATTCTaGTTAGCAGCTTCTGGAATG +
Preference number: 4 (lower is better)
Translates to: LALSSRFHLYYTTEMQSSCPLQF*LAASGM
Trigger: CATTCCAGAAGCTGCTAAGCAGAATTGCAAGGGACA...TGAGCTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR GCA 90 bp GCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGCTCAGAATTTGAGAGATTCTTCTaGCTCAGCCTCCTGAGTAGT +
Preference number: 4 (lower is better)
Translates to: ALSSRFHLYYTTEMQSSEFERFF*LSLLSS
Trigger: ACTACTCAGGAGGCTGAGGCAGAAGAATCTCTCAAA...TTCTGAGCTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR CCA 90 bp AGCAGAGAGCTACTTCAATCAAGTATAGCTTGCTCTAAGTTCCAGATTCCATCTTGGAGAAGGTACCTTTaGAAACTCCTTCTGGCTATG +
Preference number: 4 (lower is better)
Translates to: SRELLQSSIACSKFQIPSWRRYL*KLLLAM
Trigger: CATAGCCAGAAGGAGTTTCCAAAGGTACCTTCTCCA...AGATGGAATCTGGAACTTAGAGCAAGCTATACTTGATTGAAGTAGCTCTCTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp ATTTCTGAAGACAGGACAGCAAGGCTGATCTTCAAACTCAAGCATCGGAATGATTCCTTTTTGAGTTCCTaGGACAAAGATGCTATCCTC +
Preference number: 4 (lower is better)
Translates to: ISEDRTARLIFKLKHRNDSFLSS*DKDAIL
Trigger: GAGGATAGCATCTTTGTCCCAGGAACTCAAAAAGGA...ATCATTCCGATGCTTGAGTTTGAAGATCAGCCTTGCTGTCCTGTCTTCAGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000566445.5
ENST00000568001.5
CDS-3UTR CCA 90 bp CTTGCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGCTCATCCCCACAGGGTGTATaGCTGGAGAAAAACACAAAA +
Preference number: 4 (lower is better)
Translates to: LALSSRFHLYYTTEMQSSSPQGV*LEKNTK
Trigger: TTTTGTGTTTTTCTCCAGCCATACACCCTGTGGGGA...TGAGCTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp GTGAGATGCCATTTTAGCAGAGAGCTACTTCAATCAAGTATAGCTTGCTCTAAGCAAGCCTCATCTTTTTaGTTACAGGACTGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: VRCHFSRELLQSSIACSKQASSF*LQDCQG
Trigger: ACCCTGACAGTCCTGTAACCAAAAAGATGAGGCTTG...CTTAGAGCAAGCTATACTTGATTGAAGTAGCTCTCTGCTAAAATGGCATCTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp AGCAGAGAGCTACTTCAATCAAGTATAGCTTGCTCTAAGTTCCAGATTCCATCTAAACGTCTATCACTTTaGCACTACCAGGGGCTATTC +
Preference number: 4 (lower is better)
Translates to: SRELLQSSIACSKFQIPSKRLSL*HYQGLF
Trigger: GAATAGCCCCTGGTAGTGCCAAAGTGATAGACGTTT...AGATGGAATCTGGAACTTAGAGCAAGCTATACTTGATTGAAGTAGCTCTCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp TCAAGTATAGCTTGCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATTGTCACTACAGGACATaGAGCGTGTTCTGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: SSIACSKFQIPSVLHNRDCHYRT*SVFCLH
Trigger: GTGGAGACAGAACACGCTCCATGTCCTGTAGTGACA...ATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGCAAGCTATACTTGA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp AGCAATAAAACACAATGGAAGTCAGATAGTGAGGTCATTAGTGAGATGCCATTTTGTCACTACAGGACATaGAGCGTGTTCTGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: SNKTQWKSDSEVISEMPFCHYRT*SVFCLH
Trigger: GTGGAGACAGAACACGCTCCATGTCCTGTAGTGACA...AAATGGCATCTCACTAATGACCTCACTATCTGACTTCCATTGTGTTTTATTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp GCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGCTCAGAACTTTGTTGTTCCCTGTaGAAAGCCATTGGCAGTAAC +
Preference number: 4 (lower is better)
Translates to: ALSSRFHLYYTTEMQSSELCCSL*KAIGSN
Trigger: GTTACTGCCAATGGCTTTCCACAGGGAACAACAAAG...TTCTGAGCTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp CTTGCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGCTCACTGCTTAGCAGCTTCTaGAATGATCTGAAGAGTTCC +
Preference number: 4 (lower is better)
Translates to: LALSSRFHLYYTTEMQSSLLSSF*NDLKSS
Trigger: GGAACTCTTCAGATCATTCCAGAAGCTGCTAAGCAG...TGAGCTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp AGCAGAGAGCTACTTCAATCAAGTATAGCTTGCTCTAAGTTCCAGATTCCATCTCTGCTTAGCAGCTTCTaGAATGATCTGAAGAGTTCC +
Preference number: 4 (lower is better)
Translates to: SRELLQSSIACSKFQIPSLLSSF*NDLKSS
Trigger: GGAACTCTTCAGATCATTCCAGAAGCTGCTAAGCAG...AGATGGAATCTGGAACTTAGAGCAAGCTATACTTGATTGAAGTAGCTCTCTGCT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp TCTATAAACGTCTATCACTTTGGCACTACCAGGGGCTATTCTGGTGACAGTAGCCACCTTTTGGCTTTTTaGACAGAACTCTTTCAATTG +
Preference number: 4 (lower is better)
Translates to: SINVYHFGTTRGYSGDSSHLLAF*TELFQL
Trigger: CAATTGAAAGAGTTCTGTCCAAAAAGCCAAAAGGTG...GCTACTGTCACCAGAATAGCCCCTGGTAGTGCCAAAGTGATAGACGTTTATAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR TCA 90 bp AGAGAGCTACTTCAATCAAGTATAGCTTGCTCTAAGTTCCAGATTCCATCTGTATGTTCCTGTTCCCATTaGCACAACTTCCTTTGTCAC +
Preference number: 4 (lower is better)
Translates to: RELLQSSIACSKFQIPSVCSCSH*HNFLCH
Trigger: GTGACAAAGGAAGTTGTGTCAATGGGAACAGGAACA...TACAGATGGAATCTGGAACTTAGAGCAAGCTATACTTGATTGAAGTAGCTCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR TCA 90 bp TCAAGTATAGCTTGCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATACAGGACAGCAAGGCTaGTCTTCAAACTCAAGCATC +
Preference number: 4 (lower is better)
Translates to: SSIACSKFQIPSVLHNRDTGQQG*SSNSSI
Trigger: GATGCTTGAGTTTGAAGATCAGCCTTGCTGTCCTGT...ATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGCAAGCTATACTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR TCA 90 bp ATAGCTTGCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGAAAGCAGACACATTCTaGCACCTTCCAATCAGTGCT +
Preference number: 4 (lower is better)
Translates to: IACSKFQIPSVLHNRDAKKADTF*HLPISA
Trigger: AGCACTGATTGGAAGGTGTCAGAATGTGTCTGCTTT...CTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGCAAGCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR TCA 90 bp CTTGCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGCTCAATTTGGGATCTTGCCTaGAGGCTTCCAATTGTTTTC +
Preference number: 4 (lower is better)
Translates to: LALSSRFHLYYTTEMQSSIWDLA*RLPIVF
Trigger: GAAAACAATTGGAAGCCTTCAGGCAAGATCCCAAAT...TGAGCTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR TCA 90 bp TCCATCTGTATTACACAACAGAGATGCAAAGCTCAGAAAGAATGTTCCCTGATTAGAGTTCCACTTTGCTaGTTTGGGATCTTGCCTGAA +
Preference number: 4 (lower is better)
Translates to: SICITQQRCKAQKECSLIRVPLC*FGILPE
Trigger: TTCAGGCAAGATCCCAAATCAGCAAAGTGGAACTCT...AATCAGGGAACATTCTTTCTGAGCTTTGCATCTCTGTTGTGTAATACAGATGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR TCA 90 bp GTGAGGTCATTAGTGAGATGCCATTTTAGCAGAGAGCTACTTCAATCAAGTATAAAAAGAATGGCTCCCTaGAGAAAGAAAGGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: VRSLVRCHFSRELLQSSIKRMAP*RKKGWE
Trigger: TTCCCAGCCTTTCTTTCTTCAGGGAGCCATTCTTTT...TATACTTGATTGAAGTAGCTCTCTGCTAAAATGGCATCTCACTAATGACCTCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000566445.5
CDS-3UTR GCA 90 bp TCCATCTGTATTACACAACAGAGATGCAAAGCTCAGAAAGAATGTTCCCTGATTGCTGATTTGGGATCTTaGCTGAAGGCTTCCAATTGT +
Preference number: 4 (lower is better)
Translates to: SICITQQRCKAQKECSLIADLGS*LKASNC
Trigger: ACAATTGGAAGCCTTCAGGCAAGATCCCAAATCAGC...AATCAGGGAACATTCTTTCTGAGCTTTGCATCTCTGTTGTGTAATACAGATGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR GCA 90 bp GCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGCTCAGAAAAACAGGCATTTATTTaGCCACAAGACCGCATCTCT +
Preference number: 4 (lower is better)
Translates to: ALSSRFHLYYTTEMQSSEKQAFI*PQDRIS
Trigger: AGAGATGCGGTCTTGTGGGCAAATAAATGCCTGTTT...TTCTGAGCTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR GCA 90 bp CTTGAACTCCGAAGCCTTTTGGTAAAGCAGACACATTCTGACACCTTCCAATCACAAAGCTGTAAAACTTaGAGAGCGTCAAACATCATT +
Preference number: 4 (lower is better)
Translates to: LELRSLLVKQTHSDTFQSQSCKT*RASNII
Trigger: AATGATGTTTGACGCTCTGCAAGTTTTACAGCTTTG...TGATTGGAAGGTGTCAGAATGTGTCTGCTTTACCAAAAGGCTTCGGAGTTCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR GCA 90 bp GTGAGATGCCATTTTAGCAGAGAGCTACTTCAATCAAGTATAGCTTGCTCTAAGGTTGCCTTCATTCTTTaGTGGCTTTCTCTAGGTAGT +
Preference number: 4 (lower is better)
Translates to: VRCHFSRELLQSSIACSKVAFIL*WLSLGS
Trigger: ACTACCTAGAGAAAGCCAGCAAAGAATGAAGGCAAC...CTTAGAGCAAGCTATACTTGATTGAAGTAGCTCTCTGCTAAAATGGCATCTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000566445.5
CDS-3UTR GCA 90 bp TCCATCTGTATTACACAACAGAGATGCAAAGCTCAGAAAGAATGTTCCCTGATTGGCTGTTTCCTTTGTTaGCTTCATTCTTTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: SICITQQRCKAQKECSLIGCFLC*LHSLLA
Trigger: AGCCAGCAAAGAATGAAGGCAACAAAGGAAACAGCC...AATCAGGGAACATTCTTTCTGAGCTTTGCATCTCTGTTGTGTAATACAGATGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp TCAAGTATAGCTTGCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATAATAATGTCCACTCATaGTTTGGCTCAGGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: SSIACSKFQIPSVLHNRDNNVHS*FGSGFP
Trigger: GGGGAAGCCTGAGCCAAACCATGAGTGGACATTATT...ATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGCAAGCTATACTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp AGCAATAAAACACAATGGAAGTCAGATAGTGAGGTCATTAGTGAGATGCCATTTAATAATGTCCACTCATaGTTTGGCTCAGGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: SNKTQWKSDSEVISEMPFNNVHS*FGSGFP
Trigger: GGGGAAGCCTGAGCCAAACCATGAGTGGACATTATT...AAATGGCATCTCACTAATGACCTCACTATCTGACTTCCATTGTGTTTTATTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp GCTTGCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGCTCCGTTCTTCCTCATTTTaGACTGTCCTATGCATTTTG +
Preference number: 4 (lower is better)
Translates to: ACSKFQIPSVLHNRDAKLRSSSF*TVLCIL
Trigger: CAAAATGCATAGGACAGTCCAAAATGAGGAAGAACG...GAGCTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGCAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp GGTGTATGGCTGGAGAAAAACACAAAAATGAGGTCTCGTCTAAGTTTCCACACTCGTTCTTCCTCATTTTaGACTGTCCTATGCATTTTG +
Preference number: 4 (lower is better)
Translates to: GVWLEKNTKMRSRLSFHTRSSSF*TVLCIL
Trigger: CAAAATGCATAGGACAGTCCAAAATGAGGAAGAACG...AGTGTGGAAACTTAGACGAGACCTCATTTTTGTGTTTTTCTCCAGCCATACACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000566445.5
ENST00000568001.5
CDS-3UTR CCA 90 bp AGAGAGCTACTTCAATCAAGTATAGCTTGCTCTAAGTTCCAGATTCCATCTGTATGGAGAAGGTACCTTTaGAAACTCCTTCTGGCTATG +
Preference number: 4 (lower is better)
Translates to: RELLQSSIACSKFQIPSVWRRYL*KLLLAM
Trigger: CATAGCCAGAAGGAGTTTCCAAAGGTACCTTCTCCA...TACAGATGGAATCTGGAACTTAGAGCAAGCTATACTTGATTGAAGTAGCTCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp GTGAGATGCCATTTTAGCAGAGAGCTACTTCAATCAAGTATAGCTTGCTCTAAGTCCTTTTTGAGTTCCTaGGACAAAGATGCTATCCTC +
Preference number: 4 (lower is better)
Translates to: VRCHFSRELLQSSIACSKSFLSS*DKDAIL
Trigger: GAGGATAGCATCTTTGTCCCAGGAACTCAAAAAGGA...CTTAGAGCAAGCTATACTTGATTGAAGTAGCTCTCTGCTAAAATGGCATCTCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp GCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGCTCAGAATCCTTTTTGAGTTCCTaGGACAAAGATGCTATCCTC +
Preference number: 4 (lower is better)
Translates to: ALSSRFHLYYTTEMQSSESFLSS*DKDAIL
Trigger: GAGGATAGCATCTTTGTCCCAGGAACTCAAAAAGGA...TTCTGAGCTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp CTTGCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGCTCATCTACTGATGAGTTGTaGGCCCAATTTCTGAAGACA +
Preference number: 4 (lower is better)
Translates to: LALSSRFHLYYTTEMQSSSTDEL*AQFLKT
Trigger: TGTCTTCAGAAATTGGGCCCACAACTCATCAGTAGA...TGAGCTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp GTGAGGTCATTAGTGAGATGCCATTTTAGCAGAGAGCTACTTCAATCAAGTATAAAACGTCTATCACTTTaGCACTACCAGGGGCTATTC +
Preference number: 4 (lower is better)
Translates to: VRSLVRCHFSRELLQSSIKRLSL*HYQGLF
Trigger: GAATAGCCCCTGGTAGTGCCAAAGTGATAGACGTTT...TATACTTGATTGAAGTAGCTCTCTGCTAAAATGGCATCTCACTAATGACCTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp TCCATCTGTATTACACAACAGAGATGCAAAGCTCAGAAAGAATGTTCCCTGATTAGGATCACTGAAGAATaGGAAAAGAATGGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: SICITQQRCKAQKECSLIRITEE*EKNGSL
Trigger: CAGGGAGCCATTCTTTTCCCATTCTTCAGTGATCCT...AATCAGGGAACATTCTTTCTGAGCTTTGCATCTCTGTTGTGTAATACAGATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp TCAAGTATAGCTTGCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATCTAGACAGTCCCATATaGGGGTTATGGAAGACACTG +
Preference number: 4 (lower is better)
Translates to: SSIACSKFQIPSVLHNRDLDSPI*GLWKTL
Trigger: CAGTGTCTTCCATAACCCCCATATGGGACTGTCTAG...ATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGCAAGCTATACTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR GCA 90 bp GCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGCTCAGAATTTTGGACTGTCCTATaGATTTTGTTCCTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: ALSSRFHLYYTTEMQSSEFWTVL*ILFLFP
Trigger: TGGGAACAGGAACAAAATGCATAGGACAGTCCAAAA...TTCTGAGCTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR TCA 90 bp AGCAATAAAACACAATGGAAGTCAGATAGTGAGGTCATTAGTGAGATGCCATTTATTTGGGATCTTGCCTaGAGGCTTCCAATTGTTTTC +
Preference number: 4 (lower is better)
Translates to: SNKTQWKSDSEVISEMPFIWDLA*RLPIVF
Trigger: GAAAACAATTGGAAGCCTTCAGGCAAGATCCCAAAT...AAATGGCATCTCACTAATGACCTCACTATCTGACTTCCATTGTGTTTTATTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000566445.5
CDS-3UTR GCA 90 bp TTATGTGACCCTTACAGCTCCAGATCAAAACAGAAAGCCTTTCCTGATACCTCTAAATTAAACCAGAGGTaGAATTCACAAACCTCGATA +
Preference number: 4 (lower is better)
Translates to: LCDPYSSRSKQKAFPDTSKLNQR*NSQTSI
Trigger: TATCGAGGTTTGTGAATTGCACCTCTGGTTTAATTT...AGAGGTATCAGGAAAGGCTTTCTGTTTTGATCTGGAGCTGTAAGGGTCACATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR CCA 90 bp TCCATCTGTATTACACAACAGAGATGCAAAGCTCAGAAAGAATGTTCCCTGATTCGTTCTTCCTCATTTTaGACTGTCCTATGCATTTTG +
Preference number: 4 (lower is better)
Translates to: SICITQQRCKAQKECSLIRSSSF*TVLCIL
Trigger: CAAAATGCATAGGACAGTCCAAAATGAGGAAGAACG...AATCAGGGAACATTCTTTCTGAGCTTTGCATCTCTGTTGTGTAATACAGATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CCA 90 bp GCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGCTCAGAACACCTTTTGGCTTTTTaGACAGAACTCTTTCAATTG +
Preference number: 4 (lower is better)
Translates to: ALSSRFHLYYTTEMQSSEHLLAF*TELFQL
Trigger: CAATTGAAAGAGTTCTGTCCAAAAAGCCAAAAGGTG...TTCTGAGCTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000566445.5
CDS-3UTR GCA 90 bp GTGAGGTCATTAGTGAGATGCCATTTTAGCAGAGAGCTACTTCAATCAAGTATATCTAAAATTGATGGTTaGACAACTCTGTGGATATAC +
Preference number: 4 (lower is better)
Translates to: VRSLVRCHFSRELLQSSISKIDG*TTLWIY
Trigger: GTATATCCACAGAGTTGTGCAACCATCAATTTTAGA...TATACTTGATTGAAGTAGCTCTCTGCTAAAATGGCATCTCACTAATGACCTCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564657.2
3UTR CAA 72 bp AGCTTCCATTTTCAGTCAATCATTCAAGGTCTGAAGTaGAGTGTTAAACATTCGATGTTAAAACAGGATTGG +
Preference number: 4 (lower is better)
Translates to: SFHFQSIIQGLK*SVKHSMLKQDW
Trigger: CCAATCCTGTTTTAACATCGAATGTTTAACACTCAACTTCAGACCTTGAATGATTGACTGAAAATGGAAGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS CCA 90 bp ACTTCCGGAAGCAGAGCCCCTTCCCGGCCGCTGGAGAAGCCTGGGTaGGACCCCGAGTCGGCCAGTTACAGGATAGGAGGTGCCAGGCAA +
Preference number: 5 (lower is better)
Translates to: TSGSRAPSRPLEKPG*DPESASYRIGGARQ
Trigger: TTGCCTGGCACCTCCTATCCTGTAACTGGCCGACTCGGGGTCCCACCCAGGCTTCTCCAGCGGCCGGGAAGGGGCTCTGCTTCCGGAAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562374.1
ENST00000564657.2
CDS TCA 90 bp AGGCGCCGGCTGCTGACAGTTCCAGGCGTGGAGCGCCTTCCCACGTaGAACGCGTCCCGGAAGATACGATCCTCACAACCTCTTCCCTCA +
Preference number: 5 (lower is better)
Translates to: RRRLLTVPGVERLPT*NASRKIRSSQPLPS
Trigger: TGAGGGAAGAGGTTGTGAGGATCGTATCTTCCGGGACGCGTTTCACGTGGGAAGGCGCTCCACGCCTGGAACTGTCAGCAGCCGGCGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562374.1
ENST00000564657.2
CDS-3UTR CAA 90 bp ACTTGTCCTGCGTGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCGGCTATCAGCCCTTTTaGCCTGCACCGCACTGCGGC +
Preference number: 5 (lower is better)
Translates to: TCPAWRKAVQDEGSCYQSGYQPF*PAPHCG
Trigger: GCCGCAGTGCGGTGCAGGCAAAAAGGGCTGATAGCC...GCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCACGCAGGACAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS TCA 90 bp AGTTACAGGATAGGAGGTGCCAGGCAAGGCACTGAAGCCATGCAGTaGGAACAGCGTGAGCGCCTGATCCATTGGGTCCTGCGGCTGCCA +
Preference number: 5 (lower is better)
Translates to: SYRIGGARQGTEAMQ*EQRERLIHWVLRLP
Trigger: TGGCAGCCGCAGGACCCAATGGATCAGGCGCTCACGCTGTTCTCACTGCATGGCTTCAGTGCCTTGCCTGGCACCTCCTATCCTGTAACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562374.1
ENST00000564657.2
CDS-3UTR CAA 90 bp CACAGGGAAGAAGGCCATGCGAGACACAGACACAGAAGGCCATGTGAAGACGGAGGGGTGTCGCAGGCCTaGTCAGCTGGAGATTGTATC +
Preference number: 5 (lower is better)
Translates to: HREEGHARHRHRRPCEDGGVSQA*SAGDCI
Trigger: GATACAATCTCCAGCTGACAAGGCCTGCGACACCCC...TCCGTCTTCACATGGCCTTCTGTGTCTGTGTCTCGCATGGCCTTCTTCCCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR CAA 90 bp AGGGAAGAAGGCCATGCGAGACACAGACACAGAAGGCCATGTGAAGACGGAGGGGGGTTCTGCAATGGGTaGAGTGGTGTCCCCCAAAAC +
Preference number: 5 (lower is better)
Translates to: REEGHARHRHRRPCEDGGGFCNG*SGVPQN
Trigger: GTTTTGGGGGACACCACTCAACCCATTGCAGAACCC...CCCTCCGTCTTCACATGGCCTTCTGTGTCTGTGTCTCGCATGGCCTTCTTCCCT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000568510.1
CDS-3UTR CAA 90 bp GTGCATCAACAGTGCCCCTTGGCATCCGAGGACGTTCCATCGGGCCATCTTGTCTCAGCATGGCTATCATaGAGGATGTCTCCTGCGGCA +
Preference number: 5 (lower is better)
Translates to: VHQQCPLASEDVPSGHLVSAWLS*RMSPAA
Trigger: TGCCGCAGGAGACATCCTCAATGATAGCCATGCTGA...GACAAGATGGCCCGATGGAACGTCCTCGGATGCCAAGGGGCACTGTTGATGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR CAA 90 bp GCAAGGCTGATCTTCAAACTCAAGCATCGGAATGATGGAGGCATCCCCACAGGGGGGGTGTCGCAGGCCTaGTCAGCTGGAGATTGTATC +
Preference number: 5 (lower is better)
Translates to: ARLIFKLKHRNDGGIPTGGVSQA*SAGDCI
Trigger: GATACAATCTCCAGCTGACAAGGCCTGCGACACCCC...CCCTGTGGGGATGCCTCCATCATTCCGATGCTTGAGTTTGAAGATCAGCCTTGC
56% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000566445.5
ENST00000568001.5
CDS-3UTR CAA 90 bp ACAGGGAAGAAGGCCATGCGAGACACAGACACAGAAGGCCATGTGAAGACGGAGGGATGCCTGGTGAGATaGGGCCACTTTTCTGCTTGC +
Preference number: 5 (lower is better)
Translates to: TGKKAMRDTDTEGHVKTEGCLVR*GHFSAC
Trigger: GCAAGCAGAAAAGTGGCCCAATCTCACCAGGCATCC...CTCCGTCTTCACATGGCCTTCTGTGTCTGTGTCTCGCATGGCCTTCTTCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR CAA 90 bp AGGGAAGAAGGCCATGCGAGACACAGACACAGAAGGCCATGTGAAGACGGAGGGTTCCATCGGGCCATCTaGTCACTACAGGACATGGAG +
Preference number: 5 (lower is better)
Translates to: REEGHARHRHRRPCEDGGFHRAI*SLQDME
Trigger: CTCCATGTCCTGTAGTGACAAGATGGCCCGATGGAA...CCCTCCGTCTTCACATGGCCTTCTGTGTCTGTGTCTCGCATGGCCTTCTTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR CAA 90 bp CACAGGGAAGAAGGCCATGCGAGACACAGACACAGAAGGCCATGTGAAGACGGAAGGGGCTTCACCATGTaGGCCAGGATGGTCTTGATC +
Preference number: 5 (lower is better)
Translates to: HREEGHARHRHRRPCEDGRGFTM*ARMVLI
Trigger: GATCAAGACCATCCTGGCCAACATGGTGAAGCCCCT...TCCGTCTTCACATGGCCTTCTGTGTCTGTGTCTCGCATGGCCTTCTTCCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR CAA 90 bp CCTGCGTGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCAAACATCTTGTCAGCTGGAGATaGTATCTTCACCACCGCTGC +
Preference number: 5 (lower is better)
Translates to: PAWRKAVQDEGSCYQSKHLVSWR*YLHHRC
Trigger: GCAGCGGTGGTGAAGATACAATCTCCAGCTGACAAG...ATGTTTGCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCACGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CAA 90 bp ACTTGTCCTGCGTGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCAACTTCCTTTGTCACTaGCACCGGCTTATCAGGGGT +
Preference number: 5 (lower is better)
Translates to: TCPAWRKAVQDEGSCYQSNFLCH*HRLIRG
Trigger: ACCCCTGATAAGCCGGTGCAAGTGACAAAGGAAGTT...GCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCACGCAGGACAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CAA 90 bp CCTGCGTGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCAAACATCCCTGTGGAAAGCCATaGGCAGTAACATCCAAAGGC +
Preference number: 5 (lower is better)
Translates to: PAWRKAVQDEGSCYQSKHPCGKP*AVTSKG
Trigger: GCCTTTGGATGTTACTGCCAATGGCTTTCCACAGGG...ATGTTTGCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCACGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CAA 90 bp GAGGAACGGGAAGTGACTGCTAATGGGTTCTGCAATGGGTTGAGTGGTGTCCCCGTGGCCACTTGTCCCTaGCAATTCTGCTTAGCAGCT +
Preference number: 5 (lower is better)
Translates to: EEREVTANGFCNGLSGVPVATCP*QFCLAA
Trigger: AGCTGCTAAGCAGAATTGCAAGGGACAAGTGGCCAC...GGGGACACCACTCAACCCATTGCAGAACCCATTAGCAGTCACTTCCCGTTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000568510.1
CDS-3UTR CAA 90 bp ACTTGTCCTGCGTGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCTGGTCTGAGCTGGTATaGAGACCTCTCATTTCTAGG +
Preference number: 5 (lower is better)
Translates to: TCPAWRKAVQDEGSCYQSWSELV*RPLISR
Trigger: CCTAGAAATGAGAGGTCTCAATACCAGCTCAGACCA...GCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCACGCAGGACAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CAA 90 bp ACTTGTCCTGCGTGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCTCAGCATGGCTATCATaGAGGATGTCTCCGTTCTTC +
Preference number: 5 (lower is better)
Translates to: TCPAWRKAVQDEGSCYQSSAWLS*RMSPFF
Trigger: GAAGAACGGAGACATCCTCAATGATAGCCATGCTGA...GCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCACGCAGGACAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307921.7
ENST00000564657.2
CDS-3UTR CAA 90 bp ACTTGTCCTGCGTGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCGCTTCTACTGATGAGTaGTGGGCCCAATTTCTGAAG +
Preference number: 5 (lower is better)
Translates to: TCPAWRKAVQDEGSCYQSASTDE*WAQFLK
Trigger: CTTCAGAAATTGGGCCCACAACTCATCAGTAGAAGC...GCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCACGCAGGACAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CAA 90 bp ATCTTGTCACTACAGGACATGGAGCGTGTTCTGTCTCCACGGCCTGGCTTCACTCCCTGTGGAAAGCCATaGGCAGTAACATCCAAAGGC +
Preference number: 5 (lower is better)
Translates to: ILSLQDMERVLSPRPGFTPCGKP*AVTSKG
Trigger: GCCTTTGGATGTTACTGCCAATGGCTTTCCACAGGG...AGTGAAGCCAGGCCGTGGAGACAGAACACGCTCCATGTCCTGTAGTGACAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR CAA 90 bp AGGGAAGAAGGCCATGCGAGACACAGACACAGAAGGCCATGTGAAGACGGAGGGTTCCACTTTGCTGATTaGGGATCTTGCCTGAAGGCT +
Preference number: 5 (lower is better)
Translates to: REEGHARHRHRRPCEDGGFHFAD*GSCLKA
Trigger: AGCCTTCAGGCAAGATCCCAAATCAGCAAAGTGGAA...CCCTCCGTCTTCACATGGCCTTCTGTGTCTGTGTCTCGCATGGCCTTCTTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR CAA 90 bp GTAGGCCATGGAAAGACACAGACACAGGGAAGAAGGCCATGCGAGACACAGACAGTGGCCACTTGTCCCTaGCAATTCTGCTTAGCAGCT +
Preference number: 5 (lower is better)
Translates to: VGHGKTQTQGRRPCETQTVATCP*QFCLAA
Trigger: AGCTGCTAAGCAGAATTGCAAGGGACAAGTGGCCAC...TGTCTGTGTCTCGCATGGCCTTCTTCCCTGTGTCTGTGTCTTTCCATGGCCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000568510.1
CDS-3UTR CAA 90 bp AGACACAGGGAAGAAGGCCATGCGAGACACAGACACAGAAGGCCATGTGAAGACAGGGAGTGTGGCCACTaGTCCCTTGCAATTCTGCTT +
Preference number: 5 (lower is better)
Translates to: RHREEGHARHRHRRPCEDRECGH*SLAILL
Trigger: AAGCAGAATTGCAAGGGACAAGTGGCCACACTCCCT...GTCTTCACATGGCCTTCTGTGTCTGTGTCTCGCATGGCCTTCTTCCCTGTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000568510.1
CDS-3UTR CAA 90 bp CTGATCTTCAAACTCAAGCATCGGAATGATGGAGGCATCCCCACAGGGTGTATGGGCTGCCAACTGGAGTaGGTGGAGAAGGTACCGTTC +
Preference number: 5 (lower is better)
Translates to: LIFKLKHRNDGGIPTGCMGCQLE*VEKVPF
Trigger: GAACGGTACCTTCTCCACCAACTCCAGTTGGCAGCC...CATACACCCTGTGGGGATGCCTCCATCATTCCGATGCTTGAGTTTGAAGATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568001.5
CDS-3UTR CAA 90 bp ACAGGGAAGAAGGCCATGCGAGACACAGACACAGAAGGCCATGTGAAGACGGAGTGGTCTGAGCTGGTATaGAGACCTCTCATTTCTAGG +
Preference number: 5 (lower is better)
Translates to: TGKKAMRDTDTEGHVKTEWSELV*RPLISR
Trigger: CCTAGAAATGAGAGGTCTCAATACCAGCTCAGACCA...CTCCGTCTTCACATGGCCTTCTGTGTCTGTGTCTCGCATGGCCTTCTTCCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR CAA 90 bp CTCAAGCATCGGAATGATGGAGGCATCCCCACAGGGTGTATGGCTGGAGAAAAACTTGTCAGCTGGAGATaGTATCTTCACCACCGCTGC +
Preference number: 5 (lower is better)
Translates to: LKHRNDGGIPTGCMAGEKLVSWR*YLHHRC
Trigger: GCAGCGGTGGTGAAGATACAATCTCCAGCTGACAAG...TTTTTCTCCAGCCATACACCCTGTGGGGATGCCTCCATCATTCCGATGCTTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000566445.5
ENST00000568001.5
CDS-3UTR CAA 90 bp CCTGCGTGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCAAACATGTGGAGAAGGTACCTTaGGAAACTCCTTCTGGCTAT +
Preference number: 5 (lower is better)
Translates to: PAWRKAVQDEGSCYQSKHVEKVP*ETPSGY
Trigger: ATAGCCAGAAGGAGTTTCCAAAGGTACCTTCTCCAC...ATGTTTGCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCACGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CAA 90 bp CCTGCGTGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCAAACATGCTTCTACTGATGAGTaGTGGGCCCAATTTCTGAAG +
Preference number: 5 (lower is better)
Translates to: PAWRKAVQDEGSCYQSKHASTDE*WAQFLK
Trigger: CTTCAGAAATTGGGCCCACAACTCATCAGTAGAAGC...ATGTTTGCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCACGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CAA 90 bp CCTGCGTGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCAAACATTCAAGCCTCATCTTTTaGGTTACAGGACTGTCAGGG +
Preference number: 5 (lower is better)
Translates to: PAWRKAVQDEGSCYQSKHSSLIF*VTGLSG
Trigger: CCCTGACAGTCCTGTAACCAAAAAGATGAGGCTTGA...ATGTTTGCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCACGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CAA 90 bp GACCTGGGCTATCAGCCCTTTTTGCCTGCACCGCACTGCGGCTCTGTTCAAATATCAAGCCTCATCTTTTaGGTTACAGGACTGTCAGGG +
Preference number: 5 (lower is better)
Translates to: DLGYQPFLPAPHCGSVQISSLIF*VTGLSG
Trigger: CCCTGACAGTCCTGTAACCAAAAAGATGAGGCTTGA...TATTTGAACAGAGCCGCAGTGCGGTGCAGGCAAAAAGGGCTGATAGCCCAGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR CAA 90 bp CTTGTCCTGCGTGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCAGAACTCCGAAGCCTTTaGGTAAAGCAGACACATTCT +
Preference number: 5 (lower is better)
Translates to: LVLRGGRQFRMKGPATRAELRSL*VKQTHS
Trigger: AGAATGTGTCTGCTTTACCAAAAGGCTTCGGAGTTC...TGCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCACGCAGGACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS GCA 90 bp CCTTCTGGCTATGACCTCAGCATGGCTATCATTGAGGATGTCTCCTaGGGCAAAGATAGGACACCAGGTGAAGACATATGGAAGCTGGAG +
Preference number: 5 (lower is better)
Translates to: PSGYDLSMAIIEDVS*GKDRTPGEDIWKLE
Trigger: CTCCAGCTTCCATATGTCTTCACCTGGTGTCCTATCTTTGCCGCAGGAGACATCCTCAATGATAGCCATGCTGAGGTCATAGCCAGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS CCA 90 bp GAGGATGTCTCCTGCGGCAAAGATAGGACACCAGGTGAAGACATATaGAAGCTGGAGAGGGTCTGGTTCCGTTCTTCCTCATTTTGGACT +
Preference number: 5 (lower is better)
Translates to: EDVSCGKDRTPGEDI*KLERVWFRSSSFWT
Trigger: AGTCCAAAATGAGGAAGAACGGAACCAGACCCTCTCCAGCTTCCATATGTCTTCACCTGGTGTCCTATCTTTGCCGCAGGAGACATCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS CCA 90 bp TGGAGAAGGTACCTTTGGAAACTCCTTCTGGCTATGACCTCAGCATaGCTATCATTGAGGATGTCTCCAGGTGCGGTGGCTCACACCTTT +
Preference number: 5 (lower is better)
Translates to: WRRYLWKLLLAMTSA*LSLRMSPGAVAHTF
Trigger: AAAGGTGTGAGCCACCGCACCTGGAGACATCCTCAATGATAGCCATGCTGAGGTCATAGCCAGAAGGAGTTTCCAAAGGTACCTTCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565109.5
CDS-3UTR CAA 90 bp TGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCAAACATTTCCTTATGTCCACTCATGGTTaGGCTCAGGCTTCCCCTTCT +
Preference number: 5 (lower is better)
Translates to: WRKAVQDEGSCYQSKHFLMSTHG*AQASPS
Trigger: AGAAGGGGAAGCCTGAGCCAAACCATGAGTGGACAT...AAGGAAATGTTTGCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CAA 90 bp AAACTCAAGCATCGGAATGATGGAGGCATCCCCACAGGGTGTATGGCTGGAGAAAACTTCCTTTGTCACTaGCACCGGCTTATCAGGGGT +
Preference number: 5 (lower is better)
Translates to: KLKHRNDGGIPTGCMAGENFLCH*HRLIRG
Trigger: ACCCCTGATAAGCCGGTGCAAGTGACAAAGGAAGTT...TTCTCCAGCCATACACCCTGTGGGGATGCCTCCATCATTCCGATGCTTGAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000566445.5
ENST00000568001.5
CDS-3UTR CAA 90 bp ACTTGTCCTGCGTGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCCCGTTCTTCCTCATTTaGGACTGTCCTATGCATTTT +
Preference number: 5 (lower is better)
Translates to: TCPAWRKAVQDEGSCYQSPFFLI*DCPMHF
Trigger: AAAATGCATAGGACAGTCCAAAATGAGGAAGAACGG...GCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCACGCAGGACAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CAA 90 bp ACTTGTCCTGCGTGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCTTTCCACACTCCTTTTaGAGTTCCTGGGACAAAGAT +
Preference number: 5 (lower is better)
Translates to: TCPAWRKAVQDEGSCYQSFPHSF*SSWDKD
Trigger: ATCTTTGTCCCAGGAACTCAAAAAGGAGTGTGGAAA...GCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCACGCAGGACAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CAA 90 bp TTATGTGACCCTTACAGCTCCAGATCAAAACAGAAAGCCTTTCCTGATACCTCTGGCTATCAGCCCTTTTaGCCTGCACCGCACTGCGGC +
Preference number: 5 (lower is better)
Translates to: LCDPYSSRSKQKAFPDTSGYQPF*PAPHCG
Trigger: GCCGCAGTGCGGTGCAGGCAAAAAGGGCTGATAGCC...AGAGGTATCAGGAAAGGCTTTCTGTTTTGATCTGGAGCTGTAAGGGTCACATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000566445.5
CDS CCA 90 bp TGGAGAAGGTACCTTTGGAAACTCCTTCTGGCTATGACCTCAGCATaGCTATCATTGAGGATGTCTCCTGCGGCAAAGATAGGACACCAG +
Preference number: 5 (lower is better)
Translates to: WRRYLWKLLLAMTSA*LSLRMSPAAKIGHQ
Trigger: CTGGTGTCCTATCTTTGCCGCAGGAGACATCCTCAATGATAGCCATGCTGAGGTCATAGCCAGAAGGAGTTTCCAAAGGTACCTTCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR CAA 90 bp CCAATTTCTGAAGACAGGACAGCAAGGCTGATCTTCAAACTCAAGCATCGGAATGGGGTGTCGCAGGCCTaGTCAGCTGGAGATTGTATC +
Preference number: 5 (lower is better)
Translates to: PISEDRTARLIFKLKHRNGVSQA*SAGDCI
Trigger: GATACAATCTCCAGCTGACAAGGCCTGCGACACCCC...ATTCCGATGCTTGAGTTTGAAGATCAGCCTTGCTGTCCTGTCTTCAGAAATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566445.5
ENST00000568001.5
CDS-3UTR CAA 90 bp AGCAGAGAGCTACTTCAATCAAGTATAGCTTGCTCTAAGTTCCAGATTCCATCTGGCTATCAGCCCTTTTaGCCTGCACCGCACTGCGGC +
Preference number: 5 (lower is better)
Translates to: SRELLQSSIACSKFQIPSGYQPF*PAPHCG
Trigger: GCCGCAGTGCGGTGCAGGCAAAAAGGGCTGATAGCC...AGATGGAATCTGGAACTTAGAGCAAGCTATACTTGATTGAAGTAGCTCTCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CAA 90 bp AGGGAAGAAGGCCATGCGAGACACAGACACAGAAGGCCATGTGAAGACGGAGGGTTCCAATTGTTTTCTTaGTTGTTCCCTGTGGAAAGC +
Preference number: 5 (lower is better)
Translates to: REEGHARHRHRRPCEDGGFQLFS*LFPVES
Trigger: GCTTTCCACAGGGAACAACAAAGAAAACAATTGGAA...CCCTCCGTCTTCACATGGCCTTCTGTGTCTGTGTCTCGCATGGCCTTCTTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR CAA 90 bp CTTGTCCTGCGTGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCACCACCTTTTGGCTTTTaGGACAGAACTCTTTCAATT +
Preference number: 5 (lower is better)
Translates to: LVLRGGRQFRMKGPATRAPPFGF*DRTLSI
Trigger: AATTGAAAGAGTTCTGTCCAAAAAGCCAAAAGGTGG...TGCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCACGCAGGACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CAA 90 bp TCTTCAGAGCAGCAGTCCCCAAGGCACGAAAAAGTCTTCCTTAGAGCAGCAGTCGAACCAATAAGGACCTaGAGTAACCCCAACATGGGA +
Preference number: 5 (lower is better)
Translates to: SSEQQSPRHEKVFLRAAVEPIRT*SNPNMG
Trigger: TCCCATGTTGGGGTTACTCAAGGTCCTTATTGGTTC...GACTGCTGCTCTAAGGAAGACTTTTTCGTGCCTTGGGGACTGCTGCTCTGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR CAA 90 bp CACTCCTTTTTGAGTTCCTGGGACAAAGATGCTATCCTCTTTCAGGGTGGCTGCTGGTCTGAGCTGGTATaGAGACCTCTCATTTCTAGG +
Preference number: 5 (lower is better)
Translates to: HSFLSSWDKDAILFQGGCWSELV*RPLISR
Trigger: CCTAGAAATGAGAGGTCTCAATACCAGCTCAGACCA...GCAGCCACCCTGAAAGAGGATAGCATCTTTGTCCCAGGAACTCAAAAAGGAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR CAA 90 bp CTCAAGCATCGGAATGATGGAGGCATCCCCACAGGGTGTATGGCTGGAGAAAAATTGACACAACTTCCTTaGTCACTTGCACCGGCTTAT +
Preference number: 5 (lower is better)
Translates to: LKHRNDGGIPTGCMAGEKLTQLP*SLAPAY
Trigger: ATAAGCCGGTGCAAGTGACAAAGGAAGTTGTGTCAA...TTTTTCTCCAGCCATACACCCTGTGGGGATGCCTCCATCATTCCGATGCTTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000566445.5
ENST00000568001.5
CDS-3UTR CAA 90 bp ATCTTGTCACTACAGGACATGGAGCGTGTTCTGTCTCCACGGCCTGGCTTCACTCCGTTCTTCCTCATTTaGGACTGTCCTATGCATTTT +
Preference number: 5 (lower is better)
Translates to: ILSLQDMERVLSPRPGFTPFFLI*DCPMHF
Trigger: AAAATGCATAGGACAGTCCAAAATGAGGAAGAACGG...AGTGAAGCCAGGCCGTGGAGACAGAACACGCTCCATGTCCTGTAGTGACAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR CAA 90 bp CCCACCAACAACCTGTTTGGACTTCTAGCCTCCAGAACTGAAAGGGGATACAGTTCAGCATGGCTATCATaGAGGATGTCTCCGTTCTTC +
Preference number: 5 (lower is better)
Translates to: PTNNLFGLLASRTERGYSSAWLS*RMSPFF
Trigger: GAAGAACGGAGACATCCTCAATGATAGCCATGCTGA...ACTGTATCCCCTTTCAGTTCTGGAGGCTAGAAGTCCAAACAGGTTGTTGGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR CAA 90 bp GCTTGCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGCTCCATCAACAGTGCCCCTaGGCATCCGAGGACGTTCCA +
Preference number: 5 (lower is better)
Translates to: ACSKFQIPSVLHNRDAKLHQQCP*ASEDVP
Trigger: TGGAACGTCCTCGGATGCCAAGGGGCACTGTTGATG...GAGCTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS GCA 90 bp GTTTATGAAGACCACCTGGCCATCGACCTGAAATTAAACCAGAGGTaGAATTCACAAACCTCGATAGGCAAGGCAGGTAGAAGTTGCCAG +
Preference number: 5 (lower is better)
Translates to: VYEDHLAIDLKLNQR*NSQTSIGKAGRSCQ
Trigger: CTGGCAACTTCTACCTGCCTTGCCTATCGAGGTTTGTGAATTGCACCTCTGGTTTAATTTCAGGTCGATGGCCAGGTGGTCTTCATAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR CAA 90 bp AGCAGAGAGCTACTTCAATCAAGTATAGCTTGCTCTAAGTTCCAGATTCCATCTCATCAACAGTGCCCCTaGGCATCCGAGGACGTTCCA +
Preference number: 5 (lower is better)
Translates to: SRELLQSSIACSKFQIPSHQQCP*ASEDVP
Trigger: TGGAACGTCCTCGGATGCCAAGGGGCACTGTTGATG...AGATGGAATCTGGAACTTAGAGCAAGCTATACTTGATTGAAGTAGCTCTCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CAA 90 bp CACAGACACAGGGAAGAAGGCCATGCGAGACACAGACACAGAAGGCCATGTGAACAATTGTTTTCTTTGTaGTTCCCTGTGGAAAGCCAT +
Preference number: 5 (lower is better)
Translates to: HRHREEGHARHRHRRPCEQLFSL*FPVESH
Trigger: ATGGCTTTCCACAGGGAACAACAAAGAAAACAATTG...TTCACATGGCCTTCTGTGTCTGTGTCTCGCATGGCCTTCTTCCCTGTGTCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR CAA 90 bp CGTGGAGGAAGGCAGTTCAGGATGAAGGGTCCTGCTACCAGAGCAAACATTTCCCAATTGTTTTCTTTGTaGTTCCCTGTGGAAAGCCAT +
Preference number: 5 (lower is better)
Translates to: RGGRQFRMKGPATRANISQLFSL*FPVESH
Trigger: ATGGCTTTCCACAGGGAACAACAAAGAAAACAATTG...GGAAATGTTTGCTCTGGTAGCAGGACCCTTCATCCTGAACTGCCTTCCTCCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CAA 90 bp GTCTCCAGCTTCTCCAGGTACACACTTGGCTCCAGTTCTATAAACGTCTATCACTTCCACTTTGCTGATTaGGGATCTTGCCTGAAGGCT +
Preference number: 5 (lower is better)
Translates to: VSSFSRYTLGSSSINVYHFHFAD*GSCLKA
Trigger: AGCCTTCAGGCAAGATCCCAAATCAGCAAAGTGGAA...GTGATAGACGTTTATAGAACTGGAGCCAAGTGTGTACCTGGAGAAGCTGGAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR CAA 90 bp ACGTCTATCACTTTGGCACTACCAGGGGCTATTCTGGTGACAGTAGCCAGTCCCAGTGTTACTAGATCTTaGATTCTCTTGGCTGTTTCC +
Preference number: 5 (lower is better)
Translates to: TSITLALPGAILVTVASPSVTRS*ILLAVS
Trigger: GGAAACAGCCAAGAGAATCAAAGATCTAGTAACACT...GGGACTGGCTACTGTCACCAGAATAGCCCCTGGTAGTGCCAAAGTGATAGACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS-3UTR CAA 90 bp ACAGACACAGGGAAGAAGGCCATGCGAGACACAGACACAGAAGGCCATGTGAAGCCACCTTTTGGCTTTTaGGACAGAACTCTTTCAATT +
Preference number: 5 (lower is better)
Translates to: TDTGKKAMRDTDTEGHVKPPFGF*DRTLSI
Trigger: AATTGAAAGAGTTCTGTCCAAAAAGCCAAAAGGTGG...CTTCACATGGCCTTCTGTGTCTGTGTCTCGCATGGCCTTCTTCCCTGTGTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR CAA 90 bp GTGAGATGCCATTTTAGCAGAGAGCTACTTCAATCAAGTATAGCTTGCTCTAAGTGGCTGCTGGGTCTATaGCTGATTTGCTGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: VRCHFSRELLQSSIACSKWLLGL*LICCRA
Trigger: GGCCCTGCAGCAAATCAGCAATAGACCCAGCAGCCA...CTTAGAGCAAGCTATACTTGATTGAAGTAGCTCTCTGCTAAAATGGCATCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR CAA 90 bp TCTGAGGCACAGAGCAGGATCACTGAAGAATGGGAAAAGAATGGCTCCCTGAAGGATGTTAAAACAGGATaGGCTGCTGGGTCTATTGCT +
Preference number: 5 (lower is better)
Translates to: SEAQSRITEEWEKNGSLKDVKTG*AAGSIA
Trigger: AGCAATAGACCCAGCAGCCAATCCTGTTTTAACATC...CTTCAGGGAGCCATTCTTTTCCCATTCTTCAGTGATCCTGCTCTGTGCCTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS CCA 90 bp TGGAGAAGGTACCTTTGGAAACTCCTTCTGGCTATGACCTCAGCATaGCTATCATTGAGGATGTCTCCGTTCTTCCTCATTTTGGACTGT +
Preference number: 5 (lower is better)
Translates to: WRRYLWKLLLAMTSA*LSLRMSPFFLILDC
Trigger: ACAGTCCAAAATGAGGAAGAACGGAGACATCCTCAATGATAGCCATGCTGAGGTCATAGCCAGAAGGAGTTTCCAAAGGTACCTTCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000567281.5
CDS-3UTR CAA 90 bp ATAGCTTGCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGGGGGTGTCGCAGGCCTaGTCAGCTGGAGATTGTATC +
Preference number: 5 (lower is better)
Translates to: IACSKFQIPSVLHNRDAKGVSQA*SAGDCI
Trigger: GATACAATCTCCAGCTGACAAGGCCTGCGACACCCC...CTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGCAAGCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CAA 90 bp CCCACCAACAACCTGTTTGGACTTCTAGCCTCCAGAACTGAAAGGGGATACAGTTTTCCACACTCCTTTTaGAGTTCCTGGGACAAAGAT +
Preference number: 5 (lower is better)
Translates to: PTNNLFGLLASRTERGYSFPHSF*SSWDKD
Trigger: ATCTTTGTCCCAGGAACTCAAAAAGGAGTGTGGAAA...ACTGTATCCCCTTTCAGTTCTGGAGGCTAGAAGTCCAAACAGGTTGTTGGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR CAA 90 bp ATCTTCAAACTCAAGCATCGGAATGATGGAGGCATCCCCACAGGGTGTATGGCTTTTCCACACTCCTTTTaGAGTTCCTGGGACAAAGAT +
Preference number: 5 (lower is better)
Translates to: IFKLKHRNDGGIPTGCMAFPHSF*SSWDKD
Trigger: ATCTTTGTCCCAGGAACTCAAAAAGGAGTGTGGAAA...AGCCATACACCCTGTGGGGATGCCTCCATCATTCCGATGCTTGAGTTTGAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000566445.5
ENST00000568001.5
CDS-3UTR CAA 90 bp GCTTGCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGCTCTTCCATCGGGCCATCTaGTCACTACAGGACATGGAG +
Preference number: 5 (lower is better)
Translates to: ACSKFQIPSVLHNRDAKLFHRAI*SLQDME
Trigger: CTCCATGTCCTGTAGTGACAAGATGGCCCGATGGAA...GAGCTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGCAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CAA 90 bp TCCATCTGTATTACACAACAGAGATGCAAAGCTCAGAAAGAATGTTCCCTGATTCATCAACAGTGCCCCTaGGCATCCGAGGACGTTCCA +
Preference number: 5 (lower is better)
Translates to: SICITQQRCKAQKECSLIHQQCP*ASEDVP
Trigger: TGGAACGTCCTCGGATGCCAAGGGGCACTGTTGATG...AATCAGGGAACATTCTTTCTGAGCTTTGCATCTCTGTTGTGTAATACAGATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CAA 90 bp GCTTGCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGCTCGGGTCTATTGCTGATTaGCTGCAGGGCCTTTTGGCT +
Preference number: 5 (lower is better)
Translates to: ACSKFQIPSVLHNRDAKLGSIAD*LQGLLA
Trigger: AGCCAAAAGGCCCTGCAGCAAATCAGCAATAGACCC...GAGCTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR CAA 90 bp AGCAGAGAGCTACTTCAATCAAGTATAGCTTGCTCTAAGTTCCAGATTCCATCTCTTGTCAGCTGGAGATaGTATCTTCACCACCGCTGC +
Preference number: 5 (lower is better)
Translates to: SRELLQSSIACSKFQIPSLVSWR*YLHHRC
Trigger: GCAGCGGTGGTGAAGATACAATCTCCAGCTGACAAG...AGATGGAATCTGGAACTTAGAGCAAGCTATACTTGATTGAAGTAGCTCTCTGCT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CAA 90 bp ATAGCTTGCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGGGATGCCTGGTGAGATaGGGCCACTTTTCTGCTTGC +
Preference number: 5 (lower is better)
Translates to: IACSKFQIPSVLHNRDAKGCLVR*GHFSAC
Trigger: GCAAGCAGAAAAGTGGCCCAATCTCACCAGGCATCC...CTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGCAAGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CAA 90 bp GTGAGATGCCATTTTAGCAGAGAGCTACTTCAATCAAGTATAGCTTGCTCTAAGAGGGAGTGTGGCCACTaGTCCCTTGCAATTCTGCTT +
Preference number: 5 (lower is better)
Translates to: VRCHFSRELLQSSIACSKRECGH*SLAILL
Trigger: AAGCAGAATTGCAAGGGACAAGTGGCCACACTCCCT...CTTAGAGCAAGCTATACTTGATTGAAGTAGCTCTCTGCTAAAATGGCATCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CAA 90 bp ATAGCTTGCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGAGGCTTCAGCGATGCTaGGAGGAAGGGACTCTGGTT +
Preference number: 5 (lower is better)
Translates to: IACSKFQIPSVLHNRDAKRLQRC*EEGTLV
Trigger: AACCAGAGTCCCTTCCTCCAAGCATCGCTGAAGCCT...CTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGCAAGCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR CAA 90 bp GTGAGGTCATTAGTGAGATGCCATTTTAGCAGAGAGCTACTTCAATCAAGTATAGGGTTCTGCAATGGGTaGAGTGGTGTCCCCCAAAAC +
Preference number: 5 (lower is better)
Translates to: VRSLVRCHFSRELLQSSIGFCNG*SGVPQN
Trigger: GTTTTGGGGGACACCACTCAACCCATTGCAGAACCC...TATACTTGATTGAAGTAGCTCTCTGCTAAAATGGCATCTCACTAATGACCTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR CAA 90 bp GGTGTATGGCTGGAGAAAAACACAAAAATGAGGTCTCGTCTAAGTTTCCACACTTGGTCTGAGCTGGTATaGAGACCTCTCATTTCTAGG +
Preference number: 5 (lower is better)
Translates to: GVWLEKNTKMRSRLSFHTWSELV*RPLISR
Trigger: CCTAGAAATGAGAGGTCTCAATACCAGCTCAGACCA...AGTGTGGAAACTTAGACGAGACCTCATTTTTGTGTTTTTCTCCAGCCATACACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000566445.5
ENST00000568001.5
CDS-3UTR CAA 90 bp ATAGCTTGCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGCTTGTCAGCTGGAGATaGTATCTTCACCACCGCTGC +
Preference number: 5 (lower is better)
Translates to: IACSKFQIPSVLHNRDAKLVSWR*YLHHRC
Trigger: GCAGCGGTGGTGAAGATACAATCTCCAGCTGACAAG...CTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGCAAGCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CAA 90 bp CCAAGCCTGGCCACCTTTTGGCTTTTTGGACAGAACTCTTTCAATTGTAAGTCATTGACACAACTTCCTTaGTCACTTGCACCGGCTTAT +
Preference number: 5 (lower is better)
Translates to: PSLATFWLFGQNSFNCKSLTQLP*SLAPAY
Trigger: ATAAGCCGGTGCAAGTGACAAAGGAAGTTGTGTCAA...TGACTTACAATTGAAAGAGTTCTGTCCAAAAAGCCAAAAGGTGGCCAGGCTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CAA 90 bp AGCAATAAAACACAATGGAAGTCAGATAGTGAGGTCATTAGTGAGATGCCATTTGGATGCCTGGTGAGATaGGGCCACTTTTCTGCTTGC +
Preference number: 5 (lower is better)
Translates to: SNKTQWKSDSEVISEMPFGCLVR*GHFSAC
Trigger: GCAAGCAGAAAAGTGGCCCAATCTCACCAGGCATCC...AAATGGCATCTCACTAATGACCTCACTATCTGACTTCCATTGTGTTTTATTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CAA 90 bp TCCATCTGTATTACACAACAGAGATGCAAAGCTCAGAAAGAATGTTCCCTGATTGTGGCCACTTGTCCCTaGCAATTCTGCTTAGCAGCT +
Preference number: 5 (lower is better)
Translates to: SICITQQRCKAQKECSLIVATCP*QFCLAA
Trigger: AGCTGCTAAGCAGAATTGCAAGGGACAAGTGGCCAC...AATCAGGGAACATTCTTTCTGAGCTTTGCATCTCTGTTGTGTAATACAGATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CAA 90 bp TCCATCTGTATTACACAACAGAGATGCAAAGCTCAGAAAGAATGTTCCCTGATTAACTTCCTTTGTCACTaGCACCGGCTTATCAGGGGT +
Preference number: 5 (lower is better)
Translates to: SICITQQRCKAQKECSLINFLCH*HRLIRG
Trigger: ACCCCTGATAAGCCGGTGCAAGTGACAAAGGAAGTT...AATCAGGGAACATTCTTTCTGAGCTTTGCATCTCTGTTGTGTAATACAGATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CAA 90 bp CCAATTTCTGAAGACAGGACAGCAAGGCTGATCTTCAAACTCAAGCATCGGAATCCGTTCTTCCTCATTTaGGACTGTCCTATGCATTTT +
Preference number: 5 (lower is better)
Translates to: PISEDRTARLIFKLKHRNPFFLI*DCPMHF
Trigger: AAAATGCATAGGACAGTCCAAAATGAGGAAGAACGG...ATTCCGATGCTTGAGTTTGAAGATCAGCCTTGCTGTCCTGTCTTCAGAAATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566445.5
ENST00000568001.5
CDS-3UTR CAA 90 bp TCAAGTATAGCTTGCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATTTCCATCGGGCCATCTaGTCACTACAGGACATGGAG +
Preference number: 5 (lower is better)
Translates to: SSIACSKFQIPSVLHNRDFHRAI*SLQDME
Trigger: CTCCATGTCCTGTAGTGACAAGATGGCCCGATGGAA...ATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGCAAGCTATACTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CAA 90 bp AGCAATAAAACACAATGGAAGTCAGATAGTGAGGTCATTAGTGAGATGCCATTTCCCTGTGGAAAGCCATaGGCAGTAACATCCAAAGGC +
Preference number: 5 (lower is better)
Translates to: SNKTQWKSDSEVISEMPFPCGKP*AVTSKG
Trigger: GCCTTTGGATGTTACTGCCAATGGCTTTCCACAGGG...AAATGGCATCTCACTAATGACCTCACTATCTGACTTCCATTGTGTTTTATTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CAA 90 bp GTGAGATGCCATTTTAGCAGAGAGCTACTTCAATCAAGTATAGCTTGCTCTAAGTTCCACTTTGCTGATTaGGGATCTTGCCTGAAGGCT +
Preference number: 5 (lower is better)
Translates to: VRCHFSRELLQSSIACSKFHFAD*GSCLKA
Trigger: AGCCTTCAGGCAAGATCCCAAATCAGCAAAGTGGAA...CTTAGAGCAAGCTATACTTGATTGAAGTAGCTCTCTGCTAAAATGGCATCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CAA 90 bp AGATCAAAACAGAAAGCCTTTCCTGATACCTCTGAGAACAAGTCCAGGGCAGTCAGTGTTACTAGATCTTaGATTCTCTTGGCTGTTTCC +
Preference number: 5 (lower is better)
Translates to: RSKQKAFPDTSENKSRAVSVTRS*ILLAVS
Trigger: GGAAACAGCCAAGAGAATCAAAGATCTAGTAACACT...GACTGCCCTGGACTTGTTCTCAGAGGTATCAGGAAAGGCTTTCTGTTTTGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CAA 90 bp TCAAGTATAGCTTGCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATAACTTCCTTTGTCACTaGCACCGGCTTATCAGGGGT +
Preference number: 5 (lower is better)
Translates to: SSIACSKFQIPSVLHNRDNFLCH*HRLIRG
Trigger: ACCCCTGATAAGCCGGTGCAAGTGACAAAGGAAGTT...ATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGCAAGCTATACTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CAA 90 bp GCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGCTCAGAATTGACACAACTTCCTTaGTCACTTGCACCGGCTTAT +
Preference number: 5 (lower is better)
Translates to: ALSSRFHLYYTTEMQSSELTQLP*SLAPAY
Trigger: ATAAGCCGGTGCAAGTGACAAAGGAAGTTGTGTCAA...TTCTGAGCTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CAA 90 bp GTGAGATGCCATTTTAGCAGAGAGCTACTTCAATCAAGTATAGCTTGCTCTAAGTTGACACAACTTCCTTaGTCACTTGCACCGGCTTAT +
Preference number: 5 (lower is better)
Translates to: VRCHFSRELLQSSIACSKLTQLP*SLAPAY
Trigger: ATAAGCCGGTGCAAGTGACAAAGGAAGTTGTGTCAA...CTTAGAGCAAGCTATACTTGATTGAAGTAGCTCTCTGCTAAAATGGCATCTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CAA 90 bp ATCAGGCATTATATTCTCATAAGGAGTGTGCAACCTAGATCCCTTGCATGCACACCGTTCTTCCTCATTTaGGACTGTCCTATGCATTTT +
Preference number: 5 (lower is better)
Translates to: IRHYILIRSVQPRSLACTPFFLI*DCPMHF
Trigger: AAAATGCATAGGACAGTCCAAAATGAGGAAGAACGG...TGTGCATGCAAGGGATCTAGGTTGCACACTCCTTATGAGAATATAATGCCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS-3UTR CAA 90 bp TCCATCTGTATTACACAACAGAGATGCAAAGCTCAGAAAGAATGTTCCCTGATTGCTTCTACTGATGAGTaGTGGGCCCAATTTCTGAAG +
Preference number: 5 (lower is better)
Translates to: SICITQQRCKAQKECSLIASTDE*WAQFLK
Trigger: CTTCAGAAATTGGGCCCACAACTCATCAGTAGAAGC...AATCAGGGAACATTCTTTCTGAGCTTTGCATCTCTGTTGTGTAATACAGATGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CAA 90 bp TCCATCTGTATTACACAACAGAGATGCAAAGCTCAGAAAGAATGTTCCCTGATTTCAAGCCTCATCTTTTaGGTTACAGGACTGTCAGGG +
Preference number: 5 (lower is better)
Translates to: SICITQQRCKAQKECSLISSLIF*VTGLSG
Trigger: CCCTGACAGTCCTGTAACCAAAAAGATGAGGCTTGA...AATCAGGGAACATTCTTTCTGAGCTTTGCATCTCTGTTGTGTAATACAGATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CAA 90 bp CTTGCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGCTCAGAACTCCGAAGCCTTTaGGTAAAGCAGACACATTCT +
Preference number: 5 (lower is better)
Translates to: LALSSRFHLYYTTEMQSSELRSL*VKQTHS
Trigger: AGAATGTGTCTGCTTTACCAAAAGGCTTCGGAGTTC...TGAGCTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CAA 90 bp CAAGCCTGGCCACCTTTTGGCTTTTTGGACAGAACTCTTTCAATTGTAAGTCAGTTCCAATTGTTTTCTTaGTTGTTCCCTGTGGAAAGC +
Preference number: 5 (lower is better)
Translates to: QAWPPFGFLDRTLSIVSQFQLFS*LFPVES
Trigger: GCTTTCCACAGGGAACAACAAAGAAAACAATTGGAA...CTGACTTACAATTGAAAGAGTTCTGTCCAAAAAGCCAAAAGGTGGCCAGGCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CAA 90 bp TCAAGTATAGCTTGCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGTGGAGAAGGTACCTTaGGAAACTCCTTCTGGCTAT +
Preference number: 5 (lower is better)
Translates to: SSIACSKFQIPSVLHNRDVEKVP*ETPSGY
Trigger: ATAGCCAGAAGGAGTTTCCAAAGGTACCTTCTCCAC...ATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGCAAGCTATACTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CAA 90 bp ATAGCTTGCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGGAACTCCGAAGCCTTTaGGTAAAGCAGACACATTCT +
Preference number: 5 (lower is better)
Translates to: IACSKFQIPSVLHNRDAKELRSL*VKQTHS
Trigger: AGAATGTGTCTGCTTTACCAAAAGGCTTCGGAGTTC...CTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGCAAGCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CAA 90 bp CTTGCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGCTCATCTTGGCTGTTTCCTTaGTTGCCTTCATTCTTTGCT +
Preference number: 5 (lower is better)
Translates to: LALSSRFHLYYTTEMQSSSWLFP*LPSFFA
Trigger: AGCAAAGAATGAAGGCAACAAAGGAAACAGCCAAGA...TGAGCTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CAA 90 bp GCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGCTCAGAATCTTGGCTGTTTCCTTaGTTGCCTTCATTCTTTGCT +
Preference number: 5 (lower is better)
Translates to: ALSSRFHLYYTTEMQSSESWLFP*LPSFFA
Trigger: AGCAAAGAATGAAGGCAACAAAGGAAACAGCCAAGA...TTCTGAGCTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CAA 90 bp GTGAGATGCCATTTTAGCAGAGAGCTACTTCAATCAAGTATAGCTTGCTCTAAGAGATCTTTGATTCTCTaGGCTGTTTCCTTTGTTGCC +
Preference number: 5 (lower is better)
Translates to: VRCHFSRELLQSSIACSKRSLIL*AVSFVA
Trigger: GGCAACAAAGGAAACAGCCAAGAGAATCAAAGATCT...CTTAGAGCAAGCTATACTTGATTGAAGTAGCTCTCTGCTAAAATGGCATCTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CAA 90 bp GCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGCTCAGAATTCCAATTGTTTTCTTaGTTGTTCCCTGTGGAAAGC +
Preference number: 5 (lower is better)
Translates to: ALSSRFHLYYTTEMQSSEFQLFS*LFPVES
Trigger: GCTTTCCACAGGGAACAACAAAGAAAACAATTGGAA...TTCTGAGCTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CAA 90 bp TCAAGTATAGCTTGCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATTTTCCACACTCCTTTTaGAGTTCCTGGGACAAAGAT +
Preference number: 5 (lower is better)
Translates to: SSIACSKFQIPSVLHNRDFPHSF*SSWDKD
Trigger: ATCTTTGTCCCAGGAACTCAAAAAGGAGTGTGGAAA...ATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGCAAGCTATACTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CAA 90 bp TCCATCTGTATTACACAACAGAGATGCAAAGCTCAGAAAGAATGTTCCCTGATTCAATTGTTTTCTTTGTaGTTCCCTGTGGAAAGCCAT +
Preference number: 5 (lower is better)
Translates to: SICITQQRCKAQKECSLIQLFSL*FPVESH
Trigger: ATGGCTTTCCACAGGGAACAACAAAGAAAACAATTG...AATCAGGGAACATTCTTTCTGAGCTTTGCATCTCTGTTGTGTAATACAGATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000566445.5
CDS-3UTR CAA 90 bp ATAGCTTGCTCTAAGTTCCAGATTCCATCTGTATTACACAACAGAGATGCAAAGATTCAAGGTCTGAAGTaGAGTGTTAAACATTCGATG +
Preference number: 5 (lower is better)
Translates to: IACSKFQIPSVLHNRDAKIQGLK*SVKHSM
Trigger: CATCGAATGTTTAACACTCAACTTCAGACCTTGAAT...CTTTGCATCTCTGTTGTGTAATACAGATGGAATCTGGAACTTAGAGCAAGCTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564657.2
CDS TCA 72 bp AGGCCCCGCGCCAGGAGCTCTTCAGGCGCCGGCTGCTaGCAGTTCCAGGCGTGGAGCGCCTTCCCACGTGAA +
Preference number: 6 (lower is better)
Translates to: RPRARSSSGAGC*QFQAWSAFPRE
Trigger: TTCACGTGGGAAGGCGCTCCACGCCTGGAACTGTCAGCAGCCGGCGCCTGAAGAGCTCCTGGCGCGGGGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562374.1
ENST00000564657.2
CDS CCA 72 bp CGGAAGCAGAGCCCCTTCCCGGCCGCTGGAGAAGCCTaGGTGGGACCCCGAGTCGGCCAGTTACAGGATAGG +
Preference number: 6 (lower is better)
Translates to: RKQSPFPAAGEA*VGPRVGQLQDR
Trigger: CCTATCCTGTAACTGGCCGACTCGGGGTCCCACCCAGGCTTCTCCAGCGGCCGGGAAGGGGCTCTGCTTCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562374.1
ENST00000564657.2
CDS CCA 72 bp AGCAGAGCCCCTTCCCGGCCGCTGGAGAAGCCTGGGTaGGACCCCGAGTCGGCCAGTTACAGGATAGGAGGT +
Preference number: 6 (lower is better)
Translates to: SRAPSRPLEKPG*DPESASYRIGG
Trigger: ACCTCCTATCCTGTAACTGGCCGACTCGGGGTCCCACCCAGGCTTCTCCAGCGGCCGGGAAGGGGCTCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562374.1
ENST00000564657.2
CDS TCA 72 bp CTGCTGACAGTTCCAGGCGTGGAGCGCCTTCCCACGTaGAACGCGTCCCGGAAGATACGATCCTCACAACCT +
Preference number: 6 (lower is better)
Translates to: LLTVPGVERLPT*NASRKIRSSQP
Trigger: AGGTTGTGAGGATCGTATCTTCCGGGACGCGTTTCACGTGGGAAGGCGCTCCACGCCTGGAACTGTCAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562374.1
ENST00000564657.2
CDS CCA 72 bp GTCGGCTGCCAGGGGAGAAAAGGCTTCAGCGATGCTTaGAGGAAGGGACTCTGGTTTACGCTGGCTCCCTTC +
Preference number: 6 (lower is better)
Translates to: VGCQGRKGFSDA*RKGLWFTLAPF
Trigger: GAAGGGAGCCAGCGTAAACCAGAGTCCCTTCCTCCAAGCATCGCTGAAGCCTTTTCTCCCCTGGCAGCCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562374.1
ENST00000564657.2
CDS CAA 72 bp GTCACTTGCACCGGCTTATCAGGGGTGTCGCAGGCCTaGTCAGCTGGAGATTGTATCTTCACCACCGCTGCC +
Preference number: 6 (lower is better)
Translates to: VTCTGLSGVSQA*SAGDCIFTTAA
Trigger: GGCAGCGGTGGTGAAGATACAATCTCCAGCTGACAAGGCCTGCGACACCCCTGATAAGCCGGTGCAAGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000565109.5
ENST00000566445.5
ENST00000567281.5
ENST00000568001.5
CDS CAA 72 bp AGTCGGCTGCCAGGGGAGAAAAGGCTTCAGCGATGCTaGGAGGAAGGGACTCTGGTTTACGCTGGCTCCCTT +
Preference number: 6 (lower is better)
Translates to: SRLPGEKRLQRC*EEGTLVYAGSL
Trigger: AAGGGAGCCAGCGTAAACCAGAGTCCCTTCCTCCAAGCATCGCTGAAGCCTTTTCTCCCCTGGCAGCCGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562374.1
ENST00000564657.2
CDS CCA 72 bp AGAAAAGGCTTCAGCGATGCTTGGAGGAAGGGACTCTaGTTTACGCTGGCTCCCTTCCTAAACACTTCCGGA +
Preference number: 6 (lower is better)
Translates to: RKGFSDAWRKGL*FTLAPFLNTSG
Trigger: TCCGGAAGTGTTTAGGAAGGGAGCCAGCGTAAACCAGAGTCCCTTCCTCCAAGCATCGCTGAAGCCTTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562374.1
ENST00000564657.2
CDS CCA 72 bp GAGTTCCTGGGACAAAGATGCTATCCTCTTTCAGGGTaGCTGCCAACTGGAGTTGGTGGAGAAGGTACCGTT +
Preference number: 6 (lower is better)
Translates to: EFLGQRCYPLSG*LPTGVGGEGTV
Trigger: AACGGTACCTTCTCCACCAACTCCAGTTGGCAGCCACCCTGAAAGAGGATAGCATCTTTGTCCCAGGAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568001.5
CDS CCA 72 bp CATAGCATAGCTGAGCAATCTCATCCGCGGTCCACATaGTCTGAGCTGGTATTGAGACCTTCAGGAAACGCG +
Preference number: 6 (lower is better)
Translates to: HSIAEQSHPRST*SELVLRPSGNA
Trigger: CGCGTTTCCTGAAGGTCTCAATACCAGCTCAGACCATGTGGACCGCGGATGAGATTGCTCAGCTATGCTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567281.5
CDS CCA 72 bp TCCTGCGGCAAAGATAGGACACCAGGTGAAGACATATaGAAGCTGGAGAGGGTCTGGTTCCGTTCTTCCTCA +
Preference number: 6 (lower is better)
Translates to: SCGKDRTPGEDI*KLERVWFRSSS
Trigger: TGAGGAAGAACGGAACCAGACCCTCTCCAGCTTCCATATGTCTTCACCTGGTGTCCTATCTTTGCCGCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS CAA 90 bp ACTTCCTTTGTCACTTGCACCGGCTTATCAGGGGTGTCGCAGGCCTaGTCAGCTGGAGATTGTATCTTCACCACCGCTGCCAATAATGTC +
Preference number: 6 (lower is better)
Translates to: TSFVTCTGLSGVSQA*SAGDCIFTTAANNV
Trigger: GACATTATTGGCAGCGGTGGTGAAGATACAATCTCCAGCTGACAAGGCCTGCGACACCCCTGATAAGCCGGTGCAAGTGACAAAGGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000565109.5
ENST00000566445.5
ENST00000567281.5
ENST00000568001.5
CDS CCA 72 bp TACCTTTGGAAACTCCTTCTGGCTATGACCTCAGCATaGCTATCATTGAGGATGTCTCCAGGTGCGGTGGCT +
Preference number: 6 (lower is better)
Translates to: YLWKLLLAMTSA*LSLRMSPGAVA
Trigger: AGCCACCGCACCTGGAGACATCCTCAATGATAGCCATGCTGAGGTCATAGCCAGAAGGAGTTTCCAAAGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565109.5
CDS CCA 72 bp CATAGCATAGCTGAGCAATCTCATCCGCGGTCCACATaGTCTGAGCTGGTATTGAGACCTCTCATTTCTAGG +
Preference number: 6 (lower is better)
Translates to: HSIAEQSHPRST*SELVLRPLISR
Trigger: CCTAGAAATGAGAGGTCTCAATACCAGCTCAGACCATGTGGACCGCGGATGAGATTGCTCAGCTATGCTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000565109.5
ENST00000566445.5
ENST00000568001.5
CDS CCA 72 bp GCAAAGATAGGACACCAGGTGAAGACATATGGAAGCTaGAGAGGGTCTGGTTCCGTTCTTCCTCATTTTGGA +
Preference number: 6 (lower is better)
Translates to: AKIGHQVKTYGS*RGSGSVLPHFG
Trigger: TCCAAAATGAGGAAGAACGGAACCAGACCCTCTCCAGCTTCCATATGTCTTCACCTGGTGTCCTATCTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS CAA 90 bp AGGGTCTGGTTCCGTTCTTCCTCATTTTGGACTGTCCTATGCATTTaGTTCCTGTTCCCATTGACACAACTTCCTTTGTCACTTGCACCG +
Preference number: 6 (lower is better)
Translates to: RVWFRSSSFWTVLCI*FLFPLTQLPLSLAP
Trigger: CGGTGCAAGTGACAAAGGAAGTTGTGTCAATGGGAACAGGAACAAAATGCATAGGACAGTCCAAAATGAGGAAGAACGGAACCAGACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS CAA 90 bp GAAACCCCGTCTCGTTCTTCCTCATTTTGGACTGTCCTATGCATTTaGTTCCTGTTCCCATTGACACAACTTCCTTTGTCACTTGCACCG +
Preference number: 6 (lower is better)
Translates to: ETPSRSSSFWTVLCI*FLFPLTQLPLSLAP
Trigger: CGGTGCAAGTGACAAAGGAAGTTGTGTCAATGGGAACAGGAACAAAATGCATAGGACAGTCCAAAATGAGGAAGAACGAGACGGGGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565109.5
CDS CCA 72 bp AAGCTGGAGAGGGTCTGGTTCCGTTCTTCCTCATTTTaGACTGTCCTATGCATTTTGTTCCTGTTCCCATTG +
Preference number: 6 (lower is better)
Translates to: KLERVWFRSSSF*TVLCILFLFPL
Trigger: CAATGGGAACAGGAACAAAATGCATAGGACAGTCCAAAATGAGGAAGAACGGAACCAGACCCTCTCCAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS CCA 72 bp TACCTTTGGAAACTCCTTCTGGCTATGACCTCAGCATaGCTATCATTGAGGATGTCTCCTGCGGCAAAGATA +
Preference number: 6 (lower is better)
Translates to: YLWKLLLAMTSA*LSLRMSPAAKI
Trigger: TATCTTTGCCGCAGGAGACATCCTCAATGATAGCCATGCTGAGGTCATAGCCAGAAGGAGTTTCCAAAGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS CAA 72 bp GAAGCTGGAGAGGGTCTGGTTCCGTTCTTCCTCATTTaGGACTGTCCTATGCATTTTGTTCCTGTTCCCATT +
Preference number: 6 (lower is better)
Translates to: EAGEGLVPFFLI*DCPMHFVPVPI
Trigger: AATGGGAACAGGAACAAAATGCATAGGACAGTCCAAAATGAGGAAGAACGGAACCAGACCCTCTCCAGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566445.5
CDS GCA 72 bp TCCAGCTTCTGCACCCACAGATCCATCACTTCAGTATaGATGATGGCGATGCCTCTTCATATAGAAGTTTCT +
Preference number: 6 (lower is better)
Translates to: SSFCTHRSITSV*MMAMPLHIEVS
Trigger: AGAAACTTCTATATGAAGAGGCATCGCCATCATGCATACTGAAGTGATGGATCTGTGGGTGCAGAAGCTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568478.1
CDS CCA 72 bp TACCTTTGGAAACTCCTTCTGGCTATGACCTCAGCATaGCTATCATTGAGGATGTCTCCGTTCTTCCTCATT +
Preference number: 6 (lower is better)
Translates to: YLWKLLLAMTSA*LSLRMSPFFLI
Trigger: AATGAGGAAGAACGGAGACATCCTCAATGATAGCCATGCTGAGGTCATAGCCAGAAGGAGTTTCCAAAGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000567281.5
CDS CAA 72 bp TGGCTATCATTGAGGATGTCTCCGTTCTTCCTCATTTaGGACTGTCCTATGCATTTTGTTCCTGTTCCCATT +
Preference number: 6 (lower is better)
Translates to: WLSLRMSPFFLI*DCPMHFVPVPI
Trigger: AATGGGAACAGGAACAAAATGCATAGGACAGTCCAAAATGAGGAAGAACGGAGACATCCTCAATGATAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307921.7
ENST00000564657.2
ENST00000567281.5
CDS GCA 72 bp GCTGAAAATAACAGCTCAGCTAAACAGGCATTTATTTaGCCACAAGACCGCATCTCTGAACAGTTTCAACAA +
Preference number: 6 (lower is better)
Translates to: AENNSSAKQAFI*PQDRISEQFQQ
Trigger: TTGTTGAAACTGTTCAGAGATGCGGTCTTGTGGGCAAATAAATGCCTGTTTAGCTGAGCTGTTATTTTCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564657.2