RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADARB2 (Homo sapiens)

Ensembl gene IDs: ENSG00000185736

Ensembl transcript IDs: ENST00000381305.1, ENST00000381310.7, ENST00000381312.6, ENST00000469464.1, ENST00000474762.5, ENST00000477140.1, ENST00000490172.1

Found 594 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGTCAGGCCCTGCCAGTTGGGAGCAGCCTGCGTGTGGCGTGATCTaGTGTGGCGTGCCTCCTGCGTGTAGGGTCACCCTTGACTGCCTC +
Preference number: 1 (lower is better)
Translates to: GSGPASWEQPACGVI*CGVPPACRVTLDCL
Trigger: GAGGCAGTCAAGGGTGACCCTACACGCAGGAGGCACGCCACACCAGATCACGCCACACGCAGGCTGCTCCCAACTGGCAGGGCCTGACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR CCA 90 bp GCGAGGACAGGCTTTGGAGGTATGTGGGATGGCGGCTCCCTGACATaGACTAGGGGACTCTGCAGCCTCCCTGAGGGCCGCGGGAAGCCC +
Preference number: 1 (lower is better)
Translates to: ARTGFGGMWDGGSLT*TRGLCSLPEGRGKP
Trigger: GGGCTTCCCGCGGCCCTCAGGGAGGCTGCAGAGTCCCCTAGTCCATGTCAGGGAGCCGCCATCCCACATACCTCCAAAGCCTGTCCTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR TCA 90 bp TGCAGGCGAGGACAGGCTTTGGAGGTATGTGGGATGGCGGCTCCCTaGCATGGACTAGGGGACTCTGCAGCCTCCCTGAGGGCCGCGGGA +
Preference number: 1 (lower is better)
Translates to: CRRGQALEVCGMAAP*HGLGDSAASLRAAG
Trigger: TCCCGCGGCCCTCAGGGAGGCTGCAGAGTCCCCTAGTCCATGTCAGGGAGCCGCCATCCCACATACCTCCAAAGCCTGTCCTCGCCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR GCA 90 bp GCTGGAGGTGGACAGCGGAGGCTGCCTGGCCGCGCAGCCGTTCCCTaGGCCCCGTCCTGCAAAAAGGCCAGAAACCACCAGACACTAACT +
Preference number: 1 (lower is better)
Translates to: AGGGQRRLPGRAAVP*APSCKKARNHQTLT
Trigger: AGTTAGTGTCTGGTGGTTTCTGGCCTTTTTGCAGGACGGGGCGCAGGGAACGGCTGCGCGGCCAGGCAGCCTCCGCTGTCCACCTCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR GCA 90 bp GGTGATTTGAGGCCTGGGTGGGAGACTTCAGCCAGGAGCTGGCCGTaGTCCCACGCATTCAGGGGAGCGCTCACTTCTGACTGCTGCGAA +
Preference number: 1 (lower is better)
Translates to: GDLRPGWETSARSWP*SHAFRGALTSDCCE
Trigger: TTCGCAGCAGTCAGAAGTGAGCGCTCCCCTGAATGCGTGGGAGCACGGCCAGCTCCTGGCTGAAGTCTCCCACCCAGGCCTCAAATCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR CCA 90 bp GATGAAGGTGATTTGAGGCCTGGGTGGGAGACTTCAGCCAGGAGCTaGCCGTGCTCCCACGCATTCAGGGGAGCGCTCACTTCTGACTGC +
Preference number: 1 (lower is better)
Translates to: DEGDLRPGWETSARS*PCSHAFRGALTSDC
Trigger: GCAGTCAGAAGTGAGCGCTCCCCTGAATGCGTGGGAGCACGGCCAGCTCCTGGCTGAAGTCTCCCACCCAGGCCTCAAATCACCTTCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR CCA 90 bp ACCCTTGACTGCCTCGACTACCTTCTCCTTTCACTACCCAGGGCCTaGGACCCTCCTTTCCTTACGTGGGGTCCCCTCTGCAGCCCACAT +
Preference number: 1 (lower is better)
Translates to: TLDCLDYLLLSLPRA*DPPFLTWGPLCSPH
Trigger: ATGTGGGCTGCAGAGGGGACCCCACGTAAGGAAAGGAGGGTCCCAGGCCCTGGGTAGTGAAAGGAGAAGGTAGTCGAGGCAGTCAAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR CCA 90 bp CGAGCTCTGCAAAAACTGCAGGCGAGGACAGGCTTTGGAGGTATGTaGGATGGCGGCTCCCTGACATGGACTAGGGGACTCTGCAGCCTC +
Preference number: 1 (lower is better)
Translates to: RALQKLQARTGFGGM*DGGSLTWTRGLCSL
Trigger: GAGGCTGCAGAGTCCCCTAGTCCATGTCAGGGAGCCGCCATCCCACATACCTCCAAAGCCTGTCCTCGCCTGCAGTTTTTGCAGAGCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR GCA 90 bp AGCTGGCCGTGCTCCCACGCATTCAGGGGAGCGCTCACTTCTGACTaGTGCGAATGTCTGAGCCACCCATCACCTCTCGACTCTAAGTTC +
Preference number: 1 (lower is better)
Translates to: SWPCSHAFRGALTSD*CECLSHPSPLDSKF
Trigger: GAACTTAGAGTCGAGAGGTGATGGGTGGCTCAGACATTCGCAGCAGTCAGAAGTGAGCGCTCCCCTGAATGCGTGGGAGCACGGCCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR GCA 90 bp TGGCCGTGCTCCCACGCATTCAGGGGAGCGCTCACTTCTGACTGCTaGGAATGTCTGAGCCACCCATCACCTCTCGACTCTAAGTTCTCT +
Preference number: 1 (lower is better)
Translates to: WPCSHAFRGALTSDC*ECLSHPSPLDSKFS
Trigger: AGAGAACTTAGAGTCGAGAGGTGATGGGTGGCTCAGACATTCGCAGCAGTCAGAAGTGAGCGCTCCCCTGAATGCGTGGGAGCACGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR CCA 90 bp GCTTCTCTAGCCAACATCTCAGATGAAGGTGATTTGAGGCCTGGGTaGGAGACTTCAGCCAGGAGCTGGCCGTGCTCCCACGCATTCAGG +
Preference number: 1 (lower is better)
Translates to: ASLANISDEGDLRPG*ETSARSWPCSHAFR
Trigger: CCTGAATGCGTGGGAGCACGGCCAGCTCCTGGCTGAAGTCTCCCACCCAGGCCTCAAATCACCTTCATCTGAGATGTTGGCTAGAGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR TCA 90 bp TTCATGATGCTGGCCACTGGGTGGCCGAGCGCTTTCCGAGTCCCGTaGATCAGACCCTGCGTCTTCCCTGTGACAGTGAAATCTGCTTAC +
Preference number: 1 (lower is better)
Translates to: FMMLATGWPSAFRVP*IRPCVFPVTVKSAY
Trigger: GTAAGCAGATTTCACTGTCACAGGGAAGACGCAGGGTCTGATTCACGGGACTCGGAAAGCGCTCGGCCACCCAGTGGCCAGCATCATGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR TCA 90 bp AAAACTGCAGGGCAGACATGGCCTGAAAGTGGTGCTGGGATGTTCTaGCCTGGACCTGAGGGCGAAATCCTCAGGCTTCAACACGAGCCC +
Preference number: 1 (lower is better)
Translates to: KTAGQTWPESGAGMF*PGPEGEILRLQHEP
Trigger: GGGCTCGTGTTGAAGCCTGAGGATTTCGCCCTCAGGTCCAGGTCAGAACATCCCAGCACCACTTTCAGGCCATGTCTGCCCTGCAGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR CCA 90 bp GGGTGGTCAGCTGGGATTCTTTCCGGGAAGCCCACACCCCAGAGGTaGACACCACCATGCTTTGCCGTCTGCCATCACTGTCATGAATTT +
Preference number: 1 (lower is better)
Translates to: GWSAGILSGKPTPQR*TPPCFAVCHHCHEF
Trigger: AAATTCATGACAGTGATGGCAGACGGCAAAGCATGGTGGTGTCCACCTCTGGGGTGTGGGCTTCCCGGAAAGAATCCCAGCTGACCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR CCA 90 bp CTAACTCAACAGTGCATGTGCCCCTGGGTGTGGGGGACAGGGTTCTaGGGCCAGCGATCTGGAAAGAGGCACGTTCTGAATTTGTGTTGT +
Preference number: 1 (lower is better)
Translates to: LTQQCMCPWVWGTGF*GQRSGKRHVLNLCC
Trigger: ACAACACAAATTCAGAACGTGCCTCTTTCCAGATCGCTGGCCCCAGAACCCTGTCCCCCACACCCAGGGGCACATGCACTGTTGAGTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
3UTR TCA 90 bp GGGGGACAGGGTTCTGGGGCCAGCGATCTGGAAAGAGGCACGTTCTaGATTTGTGTTGTTGCTCGTCCAAACATTGCACACTCGCGTGTT +
Preference number: 1 (lower is better)
Translates to: GGQGSGASDLERGTF*ICVVARPNIAHSRV
Trigger: AACACGCGAGTGTGCAATGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTTTCCAGATCGCTGGCCCCAGAACCCTGTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
3UTR TCA 90 bp CCCACGCATTCAGGGGAGCGCTCACTTCTGACTGCTGCGAATGTCTaGGCCACCCATCACCTCTCGACTCTAAGTTCTCTAAGCTTCATC +
Preference number: 1 (lower is better)
Translates to: PTHSGERSLLTAANV*ATHHLSTLSSLSFI
Trigger: GATGAAGCTTAGAGAACTTAGAGTCGAGAGGTGATGGGTGGCTCAGACATTCGCAGCAGTCAGAAGTGAGCGCTCCCCTGAATGCGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR GCA 90 bp CCCACAGAGCCTCACCGGGTTCTGTTGGGTGTTATGAGAGGCGGCTaGAGCGATCCAACGGTAGTACATAAAAGGAAAGCCTCTCAGCTT +
Preference number: 1 (lower is better)
Translates to: PTEPHRVLLGVMRGG*SDPTVVHKRKASQL
Trigger: AAGCTGAGAGGCTTTCCTTTTATGTACTACCGTTGGATCGCTGCAGCCGCCTCTCATAACACCCAACAGAACCCGGTGAGGCTCTGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR CCA 90 bp CCTCACTTGGAGGGGAATGGGTGGCCACTCTTAAGACCAATTCAGTaGTCAAAACTGCAGGGCAGACATGGCCTGAAAGTGGTGCTGGGA +
Preference number: 1 (lower is better)
Translates to: PHLEGNGWPLLRPIQ*SKLQGRHGLKVVLG
Trigger: TCCCAGCACCACTTTCAGGCCATGTCTGCCCTGCAGTTTTGACCACTGAATTGGTCTTAAGAGTGGCCACCCATTCCCCTCCAAGTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR GCA 90 bp GGGATTCTTTCCGGGAAGCCCACACCCCAGAGGTGGACACCACCATaGTTTGCCGTCTGCCATCACTGTCATGAATTTCAGAGATGGATT +
Preference number: 1 (lower is better)
Translates to: GILSGKPTPQRWTPP*FAVCHHCHEFQRWI
Trigger: AATCCATCTCTGAAATTCATGACAGTGATGGCAGACGGCAAAGCATGGTGGTGTCCACCTCTGGGGTGTGGGCTTCCCGGAAAGAATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR CCA 90 bp TATGTACAGCACAATGTTATTCTTGCACTTTCTGGGGTGGTCAGCTaGGATTCTTTCCGGGAAGCCCACACCCCAGAGGTGGACACCACC +
Preference number: 1 (lower is better)
Translates to: YVQHNVILALSGVVS*DSFREAHTPEVDTT
Trigger: GGTGGTGTCCACCTCTGGGGTGTGGGCTTCCCGGAAAGAATCCCAGCTGACCACCCCAGAAAGTGCAAGAATAACATTGTGCTGTACATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR CCA 90 bp GAGATGTGGCCACCAGCGTTCCTTCTGGTGGGAGGTCAGAACATGTaGACACATTCAGGAGAGTCCAAAAATGACTGCAGCAACTCCCTG +
Preference number: 1 (lower is better)
Translates to: EMWPPAFLLVGGQNM*THSGESKNDCSNSL
Trigger: CAGGGAGTTGCTGCAGTCATTTTTGGACTCTCCTGAATGTGTCCACATGTTCTGACCTCCCACCAGAAGGAACGCTGGTGGCCACATCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR CCA 90 bp AATTTGTGTTGTTGCTCGTCCAAACATTGCACACTCGCGTGTTTCTaGGACACCAAAGTAAAACGAATGCAGGGAACCGGCCGACCCGCC +
Preference number: 1 (lower is better)
Translates to: NLCCCSSKHCTLACF*DTKVKRMQGTGRPA
Trigger: GGCGGGTCGGCCGGTTCCCTGCATTCGTTTTACTTTGGTGTCCCAGAAACACGCGAGTGTGCAATGTTTGGACGAGCAACAACACAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
3UTR CCA 90 bp CACTTGACTATGTACAGCACAATGTTATTCTTGCACTTTCTGGGGTaGTCAGCTGGGATTCTTTCCGGGAAGCCCACACCCCAGAGGTGG +
Preference number: 1 (lower is better)
Translates to: HLTMYSTMLFLHFLG*SAGILSGKPTPQRW
Trigger: CCACCTCTGGGGTGTGGGCTTCCCGGAAAGAATCCCAGCTGACCACCCCAGAAAGTGCAAGAATAACATTGTGCTGTACATAGTCAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR GCA 90 bp TGGGGCCAGCGATCTGGAAAGAGGCACGTTCTGAATTTGTGTTGTTaGTCGTCCAAACATTGCACACTCGCGTGTTTCTGGGACACCAAA +
Preference number: 1 (lower is better)
Translates to: WGQRSGKRHVLNLCC*SSKHCTLACFWDTK
Trigger: TTTGGTGTCCCAGAAACACGCGAGTGTGCAATGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTTTCCAGATCGCTGGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
3UTR TCA 90 bp CAGCTCGAGGTACATGGATTACGTAAAGATACTTGGAAAAGAGCCTaGCCCCGTATGAATACAGCGCCTTGGCTCTCAGGGATGATGCTG +
Preference number: 1 (lower is better)
Translates to: QLEVHGLRKDTWKRA*PRMNTAPWLSGMML
Trigger: CAGCATCATCCCTGAGAGCCAAGGCGCTGTATTCATACGGGGTCAGGCTCTTTTCCAAGTATCTTTACGTAATCCATGTACCTCGAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR GCA 90 bp AAAGAGGCACTGGGACCAGGTGATCTCGCCTTGGTGTTTAGGGAATaGTCATCCCTCCAACCTTGGCTTAGGATGATGAGTTGGGAAATA +
Preference number: 1 (lower is better)
Translates to: KEALGPGDLALVFRE*SSLQPWLRMMSWEI
Trigger: TATTTCCCAACTCATCATCCTAAGCCAAGGTTGGAGGGATGAGCATTCCCTAAACACCAAGGCGAGATCACCTGGTCCCAGTGCCTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR CCA 90 bp CACTTCCCCACCATCCTTCCTTCACTTTCTCGGATTCAGAATTTGTaGGAGAAGTTTGACGGGTCACCAGCAGCCCAGTGTTTCCAGAAA +
Preference number: 1 (lower is better)
Translates to: HFPTILPSLSRIQNL*EKFDGSPAAQCFQK
Trigger: TTTCTGGAAACACTGGGCTGCTGGTGACCCGTCAAACTTCTCCCACAAATTCTGAATCCGAGAAAGTGAAGGAAGGATGGTGGGGAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR TCA 90 bp CACTCTGGCTGCATTGGAAACTCTTCTGTCGCTATCGGCCTTCTCTaGAGAGCTTTAATCTCTCCTTCCATGGAGTCTCCTGTGGACTTA +
Preference number: 1 (lower is better)
Translates to: HSGCIGNSSVAIGLL*RALISPSMESPVDL
Trigger: TAAGTCCACAGGAGACTCCATGGAAGGAGAGATTAAAGCTCTTCAGAGAAGGCCGATAGCGACAGAAGAGTTTCCAATGCAGCCAGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR TCA 90 bp TTACCGATGCATAAACTGCAGAGAGATAGAAATCTAGGGCCTGTGTaGAAAGAGGCACTGGGACCAGGTGATCTCGCCTTGGTGTTTAGG +
Preference number: 1 (lower is better)
Translates to: LPMHKLQRDRNLGPV*KEALGPGDLALVFR
Trigger: CCTAAACACCAAGGCGAGATCACCTGGTCCCAGTGCCTCTTTTCACACAGGCCCTAGATTTCTATCTCTCTGCAGTTTATGCATCGGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR CCA 90 bp GGTGATCTCGCCTTGGTGTTTAGGGAATGCTCATCCCTCCAACCTTaGCTTAGGATGATGAGTTGGGAAATAAAGTGTTCCTCTCACCAG +
Preference number: 1 (lower is better)
Translates to: GDLALVFRECSSLQP*LRMMSWEIKCSSHQ
Trigger: CTGGTGAGAGGAACACTTTATTTCCCAACTCATCATCCTAAGCCAAGGTTGGAGGGATGAGCATTCCCTAAACACCAAGGCGAGATCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR GCA 90 bp GGAAAGAGGCACGTTCTGAATTTGTGTTGTTGCTCGTCCAAACATTaGACACTCGCGTGTTTCTGGGACACCAAAGTAAAACGAATGCAG +
Preference number: 1 (lower is better)
Translates to: GKRHVLNLCCCSSKH*TLACFWDTKVKRMQ
Trigger: CTGCATTCGTTTTACTTTGGTGTCCCAGAAACACGCGAGTGTGCAATGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
3UTR-3UTR TCA 90 bp GCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCAAGAGGCTGCAGGGACGGGGCCTaGGGCTCACTCCTGCCTGGT +
Preference number: 2 (lower is better)
Translates to: AYLHVPPQASETPASPRGCRDGA*GSLLPG
Trigger: ACCAGGCAGGAGTGAGCCTCAGGCCCCGTCCCTGCA...GCCTCTTGGTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
3UTR-3UTR CCA 90 bp GCGTGCCTCCTGCGTGTAGGGTCACCCTTGACTGCCTCGACTACCTTCTCCTTTCCTCCTTTCCTTACGTaGGGTCCCCTCTGCAGCCCA +
Preference number: 2 (lower is better)
Translates to: ACLLRVGSPLTASTTFSFPPFLT*GPLCSP
Trigger: TGGGCTGCAGAGGGGACCCCACGTAAGGAAAGGAGG...AAAGGAGAAGGTAGTCGAGGCAGTCAAGGGTGACCCTACACGCAGGAGGCACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR-3UTR TCA 90 bp GCGTGCCTCCTGCGTGTAGGGTCACCCTTGACTGCCTCGACTACCTTCTCCTTTGCTTTCCGAGTCCCGTaGATCAGACCCTGCGTCTTC +
Preference number: 2 (lower is better)
Translates to: ACLLRVGSPLTASTTFSFAFRVP*IRPCVF
Trigger: GAAGACGCAGGGTCTGATTCACGGGACTCGGAAAGC...AAAGGAGAAGGTAGTCGAGGCAGTCAAGGGTGACCCTACACGCAGGAGGCACGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR-3UTR GCA 90 bp ACGGAAAGGCTCCGGCACCTCAACCTCACTCTGGCTGCATTGGAAACTCTTCTGCCTGAGGCTCACTCCTaGCTGGTGTCGTGTCGGTGC +
Preference number: 2 (lower is better)
Translates to: TERLRHLNLTLAALETLLPEAHS*LVSCRC
Trigger: GCACCGACACGACACCAGGCAGGAGTGAGCCTCAGG...CAGAAGAGTTTCCAATGCAGCCAGAGTGAGGTTGAGGTGCCGGAGCCTTTCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR-3UTR GCA 90 bp GCGTGCCTCCTGCGTGTAGGGTCACCCTTGACTGCCTCGACTACCTTCTCCTTTCACAGGCCCCCTCGCTaGAGAAACAGCGTGATTTGG +
Preference number: 2 (lower is better)
Translates to: ACLLRVGSPLTASTTFSFHRPPR*RNSVIW
Trigger: CCAAATCACGCTGTTTCTGCAGCGAGGGGGCCTGTG...AAAGGAGAAGGTAGTCGAGGCAGTCAAGGGTGACCCTACACGCAGGAGGCACGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR-3UTR GCA 90 bp GCTTCCCAGAAACAGCCTGAGAAGGAAGCTCCTCTGTCTCCACCGCATCTCTGGACTCAACAGTGCATGTaGCCCTGGGTGTGGGGGACA +
Preference number: 2 (lower is better)
Translates to: ASQKQPEKEAPLSPPHLWTQQCM*PWVWGT
Trigger: TGTCCCCCACACCCAGGGGCACATGCACTGTTGAGT...CCAGAGATGCGGTGGAGACAGAGGAGCTTCCTTCTCAGGCTGTTTCTGGGAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR-3UTR GCA 90 bp GCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCAAGAGGCCTGGTGTCGTGTCGGTaGCTCCTTCCAAGGCTGCAG +
Preference number: 2 (lower is better)
Translates to: AYLHVPPQASETPASPRGLVSCR*LLPRLQ
Trigger: CTGCAGCCTTGGAAGGAGGCACCGACACGACACCAG...GCCTCTTGGTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
3UTR-3UTR CCA 90 bp CGTGTAGGGTCACCCTTGACTGCCTCGACTACCTTCTCCTTTCACTACCCAGGGTCTGGGGTGGTCAGCTaGGATTCTTTCCGGGAAGCC +
Preference number: 2 (lower is better)
Translates to: RVGSPLTASTTFSFHYPGSGVVS*DSFREA
Trigger: GGCTTCCCGGAAAGAATCCCAGCTGACCACCCCAGA...CCCTGGGTAGTGAAAGGAGAAGGTAGTCGAGGCAGTCAAGGGTGACCCTACACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR-3UTR CCA 90 bp GCTTCCCAGAAACAGCCTGAGAAGGAAGCTCCTCTGTCTCCACCGCATCTCTGGTCACTACCCAGGGCCTaGGACCCTCCTTTCCTTACG +
Preference number: 2 (lower is better)
Translates to: ASQKQPEKEAPLSPPHLWSLPRA*DPPFLT
Trigger: CGTAAGGAAAGGAGGGTCCCAGGCCCTGGGTAGTGA...CCAGAGATGCGGTGGAGACAGAGGAGCTTCCTTCTCAGGCTGTTTCTGGGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR-3UTR TCA 90 bp ACGGAAAGGCTCCGGCACCTCAACCTCACTCTGGCTGCATTGGAAACTCTTCTGGCTGCAGAAACAGCGTaGTTTGGAGCCCACTGGGAC +
Preference number: 2 (lower is better)
Translates to: TERLRHLNLTLAALETLLAAETA*FGAHWD
Trigger: GTCCCAGTGGGCTCCAAATCACGCTGTTTCTGCAGC...CAGAAGAGTTTCCAATGCAGCCAGAGTGAGGTTGAGGTGCCGGAGCCTTTCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR-3UTR GCA 90 bp CGTGTAGGGTCACCCTTGACTGCCTCGACTACCTTCTCCTTTCACTACCCAGGGGCGCTCACTTCTGACTaGTGCGAATGTCTGAGCCAC +
Preference number: 2 (lower is better)
Translates to: RVGSPLTASTTFSFHYPGALTSD*CECLSH
Trigger: GTGGCTCAGACATTCGCAGCAGTCAGAAGTGAGCGC...CCCTGGGTAGTGAAAGGAGAAGGTAGTCGAGGCAGTCAAGGGTGACCCTACACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR-3UTR CCA 90 bp AGGAGCTGGCCGTGCTCCCACGCATTCAGGGGAGCGCTCACTTCTGACTGCTGCACACTCGCGTGTTTCTaGGACACCAAAGTAAAACGA +
Preference number: 2 (lower is better)
Translates to: RSWPCSHAFRGALTSDCCTLACF*DTKVKR
Trigger: TCGTTTTACTTTGGTGTCCCAGAAACACGCGAGTGT...GCAGCAGTCAGAAGTGAGCGCTCCCCTGAATGCGTGGGAGCACGGCCAGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR-3UTR GCA 90 bp TCTTCATTTGTGGCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCACCTGAGGCTCACTCCTaGCTGGTGTCGTGTCGGTGC +
Preference number: 2 (lower is better)
Translates to: SSFVAYLHVPPQASETPAPEAHS*LVSCRC
Trigger: GCACCGACACGACACCAGGCAGGAGTGAGCCTCAGG...TGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGCCACAAATGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
3UTR-3UTR CCA 90 bp GCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCAAGAGGCCTGGGGCCAGCGATCTaGAAAGAGGCACGTTCTGAA +
Preference number: 2 (lower is better)
Translates to: AYLHVPPQASETPASPRGLGPAI*KEARSE
Trigger: TTCAGAACGTGCCTCTTTCCAGATCGCTGGCCCCAG...GCCTCTTGGTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
3UTR-3UTR CCA 90 bp TCTTCATTTGTGGCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCACAGTGCATGTGCCCCTaGGTGTGGGGGACAGGGTTC +
Preference number: 2 (lower is better)
Translates to: SSFVAYLHVPPQASETPAQCMCP*VWGTGF
Trigger: GAACCCTGTCCCCCACACCCAGGGGCACATGCACTG...TGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGCCACAAATGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
3UTR-3UTR CCA 90 bp ACGGAAAGGCTCCGGCACCTCAACCTCACTCTGGCTGCATTGGAAACTCTTCTGTGGTTTCTCTGGGGCTaGGGTGGGCATGGCTTTTCT +
Preference number: 2 (lower is better)
Translates to: TERLRHLNLTLAALETLLWFLWG*GGHGFS
Trigger: AGAAAAGCCATGCCCACCCCAGCCCCAGAGAAACCA...CAGAAGAGTTTCCAATGCAGCCAGAGTGAGGTTGAGGTGCCGGAGCCTTTCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR-3UTR TCA 90 bp ACAGGAAGAGTCGGCGCTAACTCAACAGTGCATGTGCCCCTGGGTGTGGGGGACGAAAGAGGCACGTTCTaGATTTGTGTTGTTGCTCGT +
Preference number: 2 (lower is better)
Translates to: TGRVGANSTVHVPLGVGDERGTF*ICVVAR
Trigger: ACGAGCAACAACACAAATTCAGAACGTGCCTCTTTC...GTCCCCCACACCCAGGGGCACATGCACTGTTGAGTTAGCGCCGACTCTTCCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
3UTR-3UTR TCA 90 bp CTCTCACCAGGGTTTGATCTGTCTGCGGTTCCCGCAGGAGTGATATTGTTTGGTGTTGGAAGCCTGCTCTaGGGGTCACAGAATCCTGCC +
Preference number: 2 (lower is better)
Translates to: LSPGFDLSAVPAGVILFGVGSLL*GSQNPA
Trigger: GGCAGGATTCTGTGACCCTCAGAGCAGGCTTCCAAC...ACCAAACAATATCACTCCTGCGGGAACCGCAGACAGATCAAACCCTGGTGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR-3UTR TCA 90 bp GCTTCCCAGAAACAGCCTGAGAAGGAAGCTCCTCTGTCTCCACCGCATCTCTGGACTTGGAAAAGAGCCTaGCCCCGTATGAATACAGCG +
Preference number: 2 (lower is better)
Translates to: ASQKQPEKEAPLSPPHLWTWKRA*PRMNTA
Trigger: CGCTGTATTCATACGGGGTCAGGCTCTTTTCCAAGT...CCAGAGATGCGGTGGAGACAGAGGAGCTTCCTTCTCAGGCTGTTTCTGGGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR-3UTR TCA 90 bp GGAAAGGCTCCGGCACCTCAACCTCACTCTGGCTGCATTGGAAACTCTTCTGTCCAGATGAAGGTGATTTaGGGCCTGGGTGGGAGACTT +
Preference number: 2 (lower is better)
Translates to: GKAPAPQPHSGCIGNSSVQMKVI*GLGGRL
Trigger: AAGTCTCCCACCCAGGCCTCAAATCACCTTCATCTG...GACAGAAGAGTTTCCAATGCAGCCAGAGTGAGGTTGAGGTGCCGGAGCCTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR-3UTR GCA 90 bp TGCAGAAACAGCGTGATTTGGAGCCCACTGGGACAAAGCATTATATGCTTCTCTGCCAGGAGCTGGCCGTaGTCCCACGCATTCAGGGGA +
Preference number: 2 (lower is better)
Translates to: CRNSVIWSPLGQSIICFSARSWP*SHAFRG
Trigger: TCCCCTGAATGCGTGGGAGCACGGCCAGCTCCTGGC...AGAGAAGCATATAATGCTTTGTCCCAGTGGGCTCCAAATCACGCTGTTTCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR-3UTR CCA 90 bp CTCTCACCAGGGTTTGATCTGTCTGCGGTTCCCGCAGGAGTGATATTGTTTGGTACTGCAGGGCAGACATaGCCTGAAAGTGGTGCTGGG +
Preference number: 2 (lower is better)
Translates to: LSPGFDLSAVPAGVILFGTAGQT*PESGAG
Trigger: CCCAGCACCACTTTCAGGCCATGTCTGCCCTGCAGT...ACCAAACAATATCACTCCTGCGGGAACCGCAGACAGATCAAACCCTGGTGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR-3UTR TCA 90 bp TCACCAGGGTTTGATCTGTCTGCGGTTCCCGCAGGAGTGATATTGTTTGGTGTGATGAGTTCTCGGAGGTaGGATGACAGCAGCTCGAGG +
Preference number: 2 (lower is better)
Translates to: SPGFDLSAVPAGVILFGVMSSRR*DDSSSR
Trigger: CCTCGAGCTGCTGTCATCTCACCTCCGAGAACTCAT...CACACCAAACAATATCACTCCTGCGGGAACCGCAGACAGATCAAACCCTGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR-3UTR GCA 90 bp CTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCAAGAGGCGTGCTCGTCCAAACATTaGACACTCGCGTGTTTCTGG +
Preference number: 2 (lower is better)
Translates to: LIFMCPLKLVRPQHHQEACSSKH*TLACFW
Trigger: CCAGAAACACGCGAGTGTGCAATGTTTGGACGAGCA...CGCCTCTTGGTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
3UTR-3UTR GCA 90 bp TCTTCATTTGTGGCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCAACTCAACAGTGCATGTaGCCCTGGGTGTGGGGGACA +
Preference number: 2 (lower is better)
Translates to: SSFVAYLHVPPQASETPATQQCM*PWVWGT
Trigger: TGTCCCCCACACCCAGGGGCACATGCACTGTTGAGT...TGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGCCACAAATGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
3UTR-3UTR GCA 90 bp GCGTGCCTCCTGCGTGTAGGGTCACCCTTGACTGCCTCGACTACCTTCTCCTTTGCACAATGTTATTCTTaGACTTTCTGGGGTGGTCAG +
Preference number: 2 (lower is better)
Translates to: ACLLRVGSPLTASTTFSFAQCYS*TFWGGQ
Trigger: CTGACCACCCCAGAAAGTGCAAGAATAACATTGTGC...AAAGGAGAAGGTAGTCGAGGCAGTCAAGGGTGACCCTACACGCAGGAGGCACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR-3UTR CCA 90 bp CTCTCACCAGGGTTTGATCTGTCTGCGGTTCCCGCAGGAGTGATATTGTTTGGTCTGGGGCCAGCGATCTaGAAAGAGGCACGTTCTGAA +
Preference number: 2 (lower is better)
Translates to: LSPGFDLSAVPAGVILFGLGPAI*KEARSE
Trigger: TTCAGAACGTGCCTCTTTCCAGATCGCTGGCCCCAG...ACCAAACAATATCACTCCTGCGGGAACCGCAGACAGATCAAACCCTGGTGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR-3UTR CCA 90 bp CACGTCACAGGTCTTAACTCTGCCTCGCAGGGGTTTTGGAAACTGTTCCTTCACTGGTTTCTCTGGGGCTaGGGTGGGCATGGCTTTTCT +
Preference number: 2 (lower is better)
Translates to: HVTGLNSASQGFWKLFLHWFLWG*GGHGFS
Trigger: AGAAAAGCCATGCCCACCCCAGCCCCAGAGAAACCA...GTGAAGGAACAGTTTCCAAAACCCCTGCGAGGCAGAGTTAAGACCTGTGACGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
3UTR CAA 90 bp CTGGGGCCAGCGATCTGGAAAGAGGCACGTTCTGAATTTGTGTTGTaGCTCGTCCAAACATTGCACACTCGCGTGTTTCTGGGACACCAA +
Preference number: 2 (lower is better)
Translates to: LGPAIWKEARSEFVL*LVQTLHTRVFLGHQ
Trigger: TTGGTGTCCCAGAAACACGCGAGTGTGCAATGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTTTCCAGATCGCTGGCCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
3UTR CAA 90 bp GTTCTGGGGCCAGCGATCTGGAAAGAGGCACGTTCTGAATTTGTGTaGTTGCTCGTCCAAACATTGCACACTCGCGTGTTTCTGGGACAC +
Preference number: 2 (lower is better)
Translates to: VLGPAIWKEARSEFV*LLVQTLHTRVFLGH
Trigger: GTGTCCCAGAAACACGCGAGTGTGCAATGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTTTCCAGATCGCTGGCCCCAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
3UTR CAA 90 bp ACAGGGTTCTGGGGCCAGCGATCTGGAAAGAGGCACGTTCTGAATTaGTGTTGTTGCTCGTCCAAACATTGCACACTCGCGTGTTTCTGG +
Preference number: 2 (lower is better)
Translates to: TGFWGQRSGKRHVLN*CCCSSKHCTLACFW
Trigger: CCAGAAACACGCGAGTGTGCAATGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTTTCCAGATCGCTGGCCCCAGAACCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
3UTR CAA 90 bp AAAGCATTATATGCTTCTCTAGCCAACATCTCAGATGAAGGTGATTaGAGGCCTGGGTGGGAGACTTCAGCCAGGAGCTGGCCGTGCTCC +
Preference number: 2 (lower is better)
Translates to: KALYASLANISDEGD*RPGWETSARSWPCS
Trigger: GGAGCACGGCCAGCTCCTGGCTGAAGTCTCCCACCCAGGCCTCAAATCACCTTCATCTGAGATGTTGGCTAGAGAAGCATATAATGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR CAA 90 bp CCTCACTTCCCCACCATCCTTCCTTCACTTTCTCGGATTCAGAATTaGTGGGAGAAGTTTGACGGGTCACCAGCAGCCCAGTGTTTCCAG +
Preference number: 2 (lower is better)
Translates to: PHFPTILPSLSRIQN*WEKFDGSPAAQCFQ
Trigger: CTGGAAACACTGGGCTGCTGGTGACCCGTCAAACTTCTCCCACAAATTCTGAATCCGAGAAAGTGAAGGAAGGATGGTGGGGAAGTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR-3UTR TCA 90 bp CTGCAGAAACAGCGTGATTTGGAGCCCACTGGGACAAAGCATTATATGCTTCTCCTTGGCTCTCAGGGATaGTGCTGTGGGCTAAAGCCC +
Preference number: 2 (lower is better)
Translates to: LQKQRDLEPTGTKHYMLLLGSQG*CCGLKP
Trigger: GGGCTTTAGCCCACAGCATCATCCCTGAGAGCCAAG...GAGAAGCATATAATGCTTTGTCCCAGTGGGCTCCAAATCACGCTGTTTCTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR-3UTR CCA 90 bp CTTGACTATGTACAGCACAATGTTATTCTTGCACTTTCTGGGGTGGTCAGCTGGTGGGGGACAGGGTTCTaGGGCCAGCGATCTGGAAAG +
Preference number: 2 (lower is better)
Translates to: LDYVQHNVILALSGVVSWWGTGF*GQRSGK
Trigger: CTTTCCAGATCGCTGGCCCCAGAACCCTGTCCCCCA...CCAGCTGACCACCCCAGAAAGTGCAAGAATAACATTGTGCTGTACATAGTCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR-3UTR CCA 90 bp ACGGAAAGGCTCCGGCACCTCAACCTCACTCTGGCTGCATTGGAAACTCTTCTGTATTCTTGCACTTTCTaGGGTGGTCAGCTGGGATTC +
Preference number: 2 (lower is better)
Translates to: TERLRHLNLTLAALETLLYSCTF*GGQLGF
Trigger: GAATCCCAGCTGACCACCCCAGAAAGTGCAAGAATA...CAGAAGAGTTTCCAATGCAGCCAGAGTGAGGTTGAGGTGCCGGAGCCTTTCCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR-3UTR CCA 90 bp GACACTAACTTTTTGACTAAGAACCAGGCCGGAAACCACATTGCTGATCTTCCTCATGATGCTGGCCACTaGGTGGCCGAGCGCTTTCCG +
Preference number: 2 (lower is better)
Translates to: DTNFLTKNQAGNHIADLPHDAGH*VAERFP
Trigger: CGGAAAGCGCTCGGCCACCCAGTGGCCAGCATCATG...AGGAAGATCAGCAATGTGGTTTCCGGCCTGGTTCTTAGTCAAAAAGTTAGTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR-3UTR GCA 90 bp TCACCAGGGTTTGATCTGTCTGCGGTTCCCGCAGGAGTGATATTGTTTGGTGTGTGTGACAGTGAAATCTaGTTACAACACAGGCCCCCT +
Preference number: 2 (lower is better)
Translates to: SPGFDLSAVPAGVILFGVCDSEI*LQHRPP
Trigger: AGGGGGCCTGTGTTGTAAGCAGATTTCACTGTCACA...CACACCAAACAATATCACTCCTGCGGGAACCGCAGACAGATCAAACCCTGGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR-3UTR CCA 90 bp GACACTAACTTTTTGACTAAGAACCAGGCCGGAAACCACATTGCTGATCTTCCTCAACCCAGACCTCAGTaGCTCTTAGTATCGGCCACC +
Preference number: 2 (lower is better)
Translates to: DTNFLTKNQAGNHIADLPQPRPQ*LLVSAT
Trigger: GGTGGCCGATACTAAGAGCCACTGAGGTCTGGGTTG...AGGAAGATCAGCAATGTGGTTTCCGGCCTGGTTCTTAGTCAAAAAGTTAGTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR-3UTR CCA 90 bp TCACCAGGGTTTGATCTGTCTGCGGTTCCCGCAGGAGTGATATTGTTTGGTGTGCGGATTCAGAATTTGTaGGAGAAGTTTGACGGGTCA +
Preference number: 2 (lower is better)
Translates to: SPGFDLSAVPAGVILFGVRIQNL*EKFDGS
Trigger: TGACCCGTCAAACTTCTCCCACAAATTCTGAATCCG...CACACCAAACAATATCACTCCTGCGGGAACCGCAGACAGATCAAACCCTGGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR-3UTR GCA 90 bp CTGCAGAAACAGCGTGATTTGGAGCCCACTGGGACAAAGCATTATATGCTTCTCTGGCTTATCTTCATGTaGCCCCTCAAGCTAGTGAGA +
Preference number: 2 (lower is better)
Translates to: LQKQRDLEPTGTKHYMLLWLIFM*PLKLVR
Trigger: TCTCACTAGCTTGAGGGGGCACATGAAGATAAGCCA...GAGAAGCATATAATGCTTTGTCCCAGTGGGCTCCAAATCACGCTGTTTCTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR-3UTR CCA 90 bp CTGCAGAAACAGCGTGATTTGGAGCCCACTGGGACAAAGCATTATATGCTTCTCGCCTCGCAGGGGTTTTaGAAACTGTTCCTTCACTTT +
Preference number: 2 (lower is better)
Translates to: LQKQRDLEPTGTKHYMLLASQGF*KLFLHF
Trigger: AAAGTGAAGGAACAGTTTCCAAAACCCCTGCGAGGC...GAGAAGCATATAATGCTTTGTCCCAGTGGGCTCCAAATCACGCTGTTTCTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR-3UTR GCA 90 bp CATTTGTGGCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCTGAATTTGTGTTGTTaGTCGTCCAAACATTGCACA +
Preference number: 2 (lower is better)
Translates to: HLWLIFMCPLKLVRPQHHLNLCC*SSKHCT
Trigger: TGTGCAATGTTTGGACGAGCAACAACACAAATTCAG...GTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGCCACAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
3UTR-3UTR CCA 90 bp GACACTAACTTTTTGACTAAGAACCAGGCCGGAAACCACATTGCTGATCTTCCTATGAATACAGCGCCTTaGCTCTCAGGGATGATGCTG +
Preference number: 2 (lower is better)
Translates to: DTNFLTKNQAGNHIADLPMNTAP*LSGMML
Trigger: CAGCATCATCCCTGAGAGCCAAGGCGCTGTATTCAT...AGGAAGATCAGCAATGTGGTTTCCGGCCTGGTTCTTAGTCAAAAAGTTAGTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR CAA 90 bp TGGAAAGAGGCACGTTCTGAATTTGTGTTGTTGCTCGTCCAAACATaGCACACTCGCGTGTTTCTGGGACACCAAAGTAAAACGAATGCA +
Preference number: 2 (lower is better)
Translates to: WKEARSEFVLLLVQT*HTRVFLGHQSKTNA
Trigger: TGCATTCGTTTTACTTTGGTGTCCCAGAAACACGCGAGTGTGCAATGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
3UTR-3UTR TCA 90 bp CTTGACTATGTACAGCACAATGTTATTCTTGCACTTTCTGGGGTGGTCAGCTGGGAAAGAGGCACGTTCTaGATTTGTGTTGTTGCTCGT +
Preference number: 2 (lower is better)
Translates to: LDYVQHNVILALSGVVSWERGTF*ICVVAR
Trigger: ACGAGCAACAACACAAATTCAGAACGTGCCTCTTTC...CCAGCTGACCACCCCAGAAAGTGCAAGAATAACATTGTGCTGTACATAGTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR CAA 90 bp GGAAACCACATTGCTGATCTTCCTGATGGGAAAGCAGTGTGTGTTTaGGAGGCAGATAAAGGTGGTGCTGGTTTTATGAGGACTTTTGTA +
Preference number: 2 (lower is better)
Translates to: GNHIADLPDGKAVCV*EADKGGAGFMRTFV
Trigger: TACAAAAGTCCTCATAAAACCAGCACCACCTTTATCTGCCTCCAAAACACACACTGCTTTCCCATCAGGAAGATCAGCAATGTGGTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR-3UTR CCA 90 bp TCACCAGGGTTTGATCTGTCTGCGGTTCCCGCAGGAGTGATATTGTTTGGTGTGTGTATTTACTGTTTATaGCTCTCCAGACGTGATAAA +
Preference number: 2 (lower is better)
Translates to: SPGFDLSAVPAGVILFGVCIYCL*LSRRDK
Trigger: TTTATCACGTCTGGAGAGCCATAAACAGTAAATACA...CACACCAAACAATATCACTCCTGCGGGAACCGCAGACAGATCAAACCCTGGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR-3UTR CCA 90 bp CTTGACTATGTACAGCACAATGTTATTCTTGCACTTTCTGGGGTGGTCAGCTGGTGGCTTTCGTTTCTCTaGTTCTATTTTAGGTGTTCG +
Preference number: 2 (lower is better)
Translates to: LDYVQHNVILALSGVVSWWLSFL*FYFRCS
Trigger: CGAACACCTAAAATAGAACCAGAGAAACGAAAGCCA...CCAGCTGACCACCCCAGAAAGTGCAAGAATAACATTGTGCTGTACATAGTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR-3UTR CCA 90 bp CTGGGCATTGATATCCTCTGTATTTACTGTTTATGGCTCTCCAGACGTGATAAATCACTCTGGCTGCATTaGAAACTCTTCTGTCGCTAT +
Preference number: 2 (lower is better)
Translates to: LGIDILCIYCLWLSRRDKSLWLH*KLFCRY
Trigger: ATAGCGACAGAAGAGTTTCCAATGCAGCCAGAGTGA...TTTATCACGTCTGGAGAGCCATAAACAGTAAATACAGAGGATATCAATGCCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR GCA 72 bp AGGCCTGGGTGGGAGACTTCAGCCAGGAGCTGGCCGTaGTCCCACGCATTCAGGGGAGCGCTCACTTCTGAC +
Preference number: 3 (lower is better)
Translates to: RPGWETSARSWP*SHAFRGALTSD
Trigger: GTCAGAAGTGAGCGCTCCCCTGAATGCGTGGGAGCACGGCCAGCTCCTGGCTGAAGTCTCCCACCCAGGCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR CCA 72 bp CCTGCCAGTTGGGAGCAGCCTGCGTGTGGCGTGATCTaGTGTGGCGTGCCTCCTGCGTGTAGGGTCACCCTT +
Preference number: 3 (lower is better)
Translates to: PASWEQPACGVI*CGVPPACRVTL
Trigger: AAGGGTGACCCTACACGCAGGAGGCACGCCACACCAGATCACGCCACACGCAGGCTGCTCCCAACTGGCAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR CCA 72 bp GGCTTTGGAGGTATGTGGGATGGCGGCTCCCTGACATaGACTAGGGGACTCTGCAGCCTCCCTGAGGGCCGC +
Preference number: 3 (lower is better)
Translates to: GFGGMWDGGSLT*TRGLCSLPEGR
Trigger: GCGGCCCTCAGGGAGGCTGCAGAGTCCCCTAGTCCATGTCAGGGAGCCGCCATCCCACATACCTCCAAAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR TCA 72 bp GGACAGGCTTTGGAGGTATGTGGGATGGCGGCTCCCTaGCATGGACTAGGGGACTCTGCAGCCTCCCTGAGG +
Preference number: 3 (lower is better)
Translates to: GQALEVCGMAAP*HGLGDSAASLR
Trigger: CCTCAGGGAGGCTGCAGAGTCCCCTAGTCCATGTCAGGGAGCCGCCATCCCACATACCTCCAAAGCCTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR GCA 72 bp GGGCCTGAGGCTCACTCCTGCCTGGTGTCGTGTCGGTaGCTCCTTCCAAGGCTGCAGCTAAAACCCCTTTGC +
Preference number: 3 (lower is better)
Translates to: GPEAHSCLVSCR*LLPRLQLKPLC
Trigger: GCAAAGGGGTTTTAGCTGCAGCCTTGGAAGGAGGCACCGACACGACACCAGGCAGGAGTGAGCCTCAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
3UTR CCA 72 bp TGGGAAGTGCGAGGAAGCCAGACGGTGATTTCGAGGTaGACTTGGAGGGGCGGGCCTGACTTCATCAGCCCC +
Preference number: 3 (lower is better)
Translates to: WEVRGSQTVISR*TWRGGPDFISP
Trigger: GGGGCTGATGAAGTCAGGCCCGCCCCTCCAAGTCCACCTCGAAATCACCGTCTGGCTTCCTCGCACTTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR TCA 72 bp GCCGTGCTCCCACGCATTCAGGGGAGCGCTCACTTCTaGCTGCTGCGAATGTCTGAGCCACCCATCACCTCT +
Preference number: 3 (lower is better)
Translates to: AVLPRIQGSAHF*LLRMSEPPITS
Trigger: AGAGGTGATGGGTGGCTCAGACATTCGCAGCAGTCAGAAGTGAGCGCTCCCCTGAATGCGTGGGAGCACGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR TCA 72 bp CTGGCCACTGGGTGGCCGAGCGCTTTCCGAGTCCCGTaGATCAGACCCTGCGTCTTCCCTGTGACAGTGAAA +
Preference number: 3 (lower is better)
Translates to: LATGWPSAFRVP*IRPCVFPVTVK
Trigger: TTTCACTGTCACAGGGAAGACGCAGGGTCTGATTCACGGGACTCGGAAAGCGCTCGGCCACCCAGTGGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR GCA 72 bp CTGCCTGGCCGCGCAGCCGTTCCCTGCGCCCCGTCCTaGAAAAAGGCCAGAAACCACCAGACACTAACTTTT +
Preference number: 3 (lower is better)
Translates to: LPGRAAVPCAPS*KKARNHQTLTF
Trigger: AAAAGTTAGTGTCTGGTGGTTTCTGGCCTTTTTGCAGGACGGGGCGCAGGGAACGGCTGCGCGGCCAGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR CCA 72 bp TGCCTCGACTACCTTCTCCTTTCACTACCCAGGGCCTaGGACCCTCCTTTCCTTACGTGGGGTCCCCTCTGC +
Preference number: 3 (lower is better)
Translates to: CLDYLLLSLPRA*DPPFLTWGPLC
Trigger: GCAGAGGGGACCCCACGTAAGGAAAGGAGGGTCCCAGGCCCTGGGTAGTGAAAGGAGAAGGTAGTCGAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR GCA 72 bp TGCTCCCACGCATTCAGGGGAGCGCTCACTTCTGACTaGTGCGAATGTCTGAGCCACCCATCACCTCTCGAC +
Preference number: 3 (lower is better)
Translates to: CSHAFRGALTSD*CECLSHPSPLD
Trigger: GTCGAGAGGTGATGGGTGGCTCAGACATTCGCAGCAGTCAGAAGTGAGCGCTCCCCTGAATGCGTGGGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR CCA 72 bp GCTGGGATTCTTTCCGGGAAGCCCACACCCCAGAGGTaGACACCACCATGCTTTGCCGTCTGCCATCACTGT +
Preference number: 3 (lower is better)
Translates to: AGILSGKPTPQR*TPPCFAVCHHC
Trigger: ACAGTGATGGCAGACGGCAAAGCATGGTGGTGTCCACCTCTGGGGTGTGGGCTTCCCGGAAAGAATCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR CCA 72 bp GCCAACATCTCAGATGAAGGTGATTTGAGGCCTGGGTaGGAGACTTCAGCCAGGAGCTGGCCGTGCTCCCAC +
Preference number: 3 (lower is better)
Translates to: ANISDEGDLRPG*ETSARSWPCSH
Trigger: GTGGGAGCACGGCCAGCTCCTGGCTGAAGTCTCCCACCCAGGCCTCAAATCACCTTCATCTGAGATGTTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR CCA 72 bp GCGAGCTCTGCAAAAACTGCAGGCGAGGACAGGCTTTaGAGGTATGTGGGATGGCGGCTCCCTGACATGGAC +
Preference number: 3 (lower is better)
Translates to: ASSAKTAGEDRL*RYVGWRLPDMD
Trigger: GTCCATGTCAGGGAGCCGCCATCCCACATACCTCCAAAGCCTGTCCTCGCCTGCAGTTTTTGCAGAGCTCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR GCA 72 bp TCCCACGCATTCAGGGGAGCGCTCACTTCTGACTGCTaGGAATGTCTGAGCCACCCATCACCTCTCGACTCT +
Preference number: 3 (lower is better)
Translates to: SHAFRGALTSDC*ECLSHPSPLDS
Trigger: AGAGTCGAGAGGTGATGGGTGGCTCAGACATTCGCAGCAGTCAGAAGTGAGCGCTCCCCTGAATGCGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR TCA 72 bp GGGCAGACATGGCCTGAAAGTGGTGCTGGGATGTTCTaGCCTGGACCTGAGGGCGAAATCCTCAGGCTTCAA +
Preference number: 3 (lower is better)
Translates to: GQTWPESGAGMF*PGPEGEILRLQ
Trigger: TTGAAGCCTGAGGATTTCGCCCTCAGGTCCAGGTCAGAACATCCCAGCACCACTTTCAGGCCATGTCTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR GCA 72 bp TCCGGGAAGCCCACACCCCAGAGGTGGACACCACCATaGTTTGCCGTCTGCCATCACTGTCATGAATTTCAG +
Preference number: 3 (lower is better)
Translates to: SGKPTPQRWTPP*FAVCHHCHEFQ
Trigger: CTGAAATTCATGACAGTGATGGCAGACGGCAAAGCATGGTGGTGTCCACCTCTGGGGTGTGGGCTTCCCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR GCA 72 bp CACGGAAAGGCTCCGGCACCTCAACCTCACTCTGGCTaGATTGGAAACTCTTCTGTCGCTATCGGCCTTCTC +
Preference number: 3 (lower is better)
Translates to: HGKAPAPQPHSG*IGNSSVAIGLL
Trigger: GAGAAGGCCGATAGCGACAGAAGAGTTTCCAATGCAGCCAGAGTGAGGTTGAGGTGCCGGAGCCTTTCCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR GCA 72 bp GAAACCCTAACTCTATCCCTTGATATCACACACGGCTaGAAAACCGGGGCTGGAGGTGGACAGCGGAGGCTG +
Preference number: 3 (lower is better)
Translates to: ETLTLSLDITHG*KTGAGGGQRRL
Trigger: CAGCCTCCGCTGTCCACCTCCAGCCCCGGTTTTGCAGCCGTGTGTGATATCAAGGGATAGAGTTAGGGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR-3UTR CAA 90 bp GCTTCCCAGAAACAGCCTGAGAAGGAAGCTCCTCTGTCTCCACCGCATCTCTGGAGGCCGGAAACCACATaGCTGATCTTCCTGATGGGA +
Preference number: 3 (lower is better)
Translates to: ASQKQPEKEAPLSPPHLWRPETT*LIFLMG
Trigger: TCCCATCAGGAAGATCAGCAATGTGGTTTCCGGCCT...CCAGAGATGCGGTGGAGACAGAGGAGCTTCCTTCTCAGGCTGTTTCTGGGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR-3UTR CAA 90 bp GGAAAGGCTCCGGCACCTCAACCTCACTCTGGCTGCATTGGAAACTCTTCTGTCCAGAAACAGCGTGATTaGGAGCCCACTGGGACAAAG +
Preference number: 3 (lower is better)
Translates to: GKAPAPQPHSGCIGNSSVQKQRD*EPTGTK
Trigger: CTTTGTCCCAGTGGGCTCCAAATCACGCTGTTTCTG...GACAGAAGAGTTTCCAATGCAGCCAGAGTGAGGTTGAGGTGCCGGAGCCTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR TCA 72 bp TCAGGGGAGCGCTCACTTCTGACTGCTGCGAATGTCTaGGCCACCCATCACCTCTCGACTCTAAGTTCTCTA +
Preference number: 3 (lower is better)
Translates to: SGERSLLTAANV*ATHHLSTLSSL
Trigger: TAGAGAACTTAGAGTCGAGAGGTGATGGGTGGCTCAGACATTCGCAGCAGTCAGAAGTGAGCGCTCCCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR CCA 72 bp CACAATGTTATTCTTGCACTTTCTGGGGTGGTCAGCTaGGATTCTTTCCGGGAAGCCCACACCCCAGAGGTG +
Preference number: 3 (lower is better)
Translates to: HNVILALSGVVS*DSFREAHTPEV
Trigger: CACCTCTGGGGTGTGGGCTTCCCGGAAAGAATCCCAGCTGACCACCCCAGAAAGTGCAAGAATAACATTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR CCA 72 bp TGTGAAAAGAGGCACTGGGACCAGGTGATCTCGCCTTaGTGTTTAGGGAATGCTCATCCCTCCAACCTTGGC +
Preference number: 3 (lower is better)
Translates to: CEKRHWDQVISP*CLGNAHPSNLG
Trigger: GCCAAGGTTGGAGGGATGAGCATTCCCTAAACACCAAGGCGAGATCACCTGGTCCCAGTGCCTCTTTTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR-3UTR CAA 90 bp GCGTGCCTCCTGCGTGTAGGGTCACCCTTGACTGCCTCGACTACCTTCTCCTTTAGCACAATGTTATTCTaGCACTTTCTGGGGTGGTCA +
Preference number: 3 (lower is better)
Translates to: ACLLRVGSPLTASTTFSFSTMLF*HFLGWS
Trigger: TGACCACCCCAGAAAGTGCAAGAATAACATTGTGCT...AAAGGAGAAGGTAGTCGAGGCAGTCAAGGGTGACCCTACACGCAGGAGGCACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR GCA 72 bp CTGGGACCAGGTGATCTCGCCTTGGTGTTTAGGGAATaGTCATCCCTCCAACCTTGGCTTAGGATGATGAGT +
Preference number: 3 (lower is better)
Translates to: LGPGDLALVFRE*SSLQPWLRMMS
Trigger: ACTCATCATCCTAAGCCAAGGTTGGAGGGATGAGCATTCCCTAAACACCAAGGCGAGATCACCTGGTCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR CCA 72 bp GAGGGGAATGGGTGGCCACTCTTAAGACCAATTCAGTaGTCAAAACTGCAGGGCAGACATGGCCTGAAAGTG +
Preference number: 3 (lower is better)
Translates to: EGNGWPLLRPIQ*SKLQGRHGLKV
Trigger: CACTTTCAGGCCATGTCTGCCCTGCAGTTTTGACCACTGAATTGGTCTTAAGAGTGGCCACCCATTCCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR CCA 72 bp CCCTACTTGTGTCTTGCCCCCTCACTTGGAGGGGAATaGGTGGCCACTCTTAAGACCAATTCAGTGGTCAAA +
Preference number: 3 (lower is better)
Translates to: PYLCLAPSLGGE*VATLKTNSVVK
Trigger: TTTGACCACTGAATTGGTCTTAAGAGTGGCCACCCATTCCCCTCCAAGTGAGGGGGCAAGACACAAGTAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR-3UTR CAA 90 bp GCTTCCCAGAAACAGCCTGAGAAGGAAGCTCCTCTGTCTCCACCGCATCTCTGGATAGAAACTGGTCGTTaGAGCTTAGCTTTTGCACTG +
Preference number: 3 (lower is better)
Translates to: ASQKQPEKEAPLSPPHLWIETGR*SLAFAL
Trigger: CAGTGCAAAAGCTAAGCTCAAACGACCAGTTTCTAT...CCAGAGATGCGGTGGAGACAGAGGAGCTTCCTTCTCAGGCTGTTTCTGGGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR TCA 72 bp GGTTCTGGGGCCAGCGATCTGGAAAGAGGCACGTTCTaGATTTGTGTTGTTGCTCGTCCAAACATTGCACAC +
Preference number: 3 (lower is better)
Translates to: GSGASDLERGTF*ICVVARPNIAH
Trigger: GTGTGCAATGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTTTCCAGATCGCTGGCCCCAGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
3UTR-3UTR CAA 90 bp TCTTCATTTGTGGCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATTGCTCGTCCAAACATaGCACACTCGCGTGTTTCTG +
Preference number: 3 (lower is better)
Translates to: SSFVAYLHVPPQASETPALLVQT*HTRVFL
Trigger: CAGAAACACGCGAGTGTGCAATGTTTGGACGAGCAA...TGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGCCACAAATGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
3UTR-3UTR CAA 90 bp CTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCAAGAGGCGTCTGAATTTGTGTTGTaGCTCGTCCAAACATTGCAC +
Preference number: 3 (lower is better)
Translates to: LIFMCPLKLVRPQHHQEASEFVL*LVQTLH
Trigger: GTGCAATGTTTGGACGAGCAACAACACAAATTCAGA...CGCCTCTTGGTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
3UTR-3UTR CAA 90 bp CACGTCACAGGTCTTAACTCTGCCTCGCAGGGGTTTTGGAAACTGTTCCTTCACAATAGAGGATTCTTATaGGTTTCTCTGGGGCTGGGG +
Preference number: 3 (lower is better)
Translates to: HVTGLNSASQGFWKLFLHNRGFL*VSLGLG
Trigger: CCCCAGCCCCAGAGAAACCAATAAGAATCCTCTATT...GTGAAGGAACAGTTTCCAAAACCCCTGCGAGGCAGAGTTAAGACCTGTGACGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
3UTR GCA 72 bp AACATGTGGACACATTCAGGAGAGTCCAAAAATGACTaGAGCAACTCCCTGTGCACAAGGCATCAGGAACCC +
Preference number: 3 (lower is better)
Translates to: NMWTHSGESKND*SNSLCTRHQEP
Trigger: GGGTTCCTGATGCCTTGTGCACAGGGAGTTGCTGCAGTCATTTTTGGACTCTCCTGAATGTGTCCACATGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR CCA 72 bp ACCATCCTTCCTTCACTTTCTCGGATTCAGAATTTGTaGGAGAAGTTTGACGGGTCACCAGCAGCCCAGTGT +
Preference number: 3 (lower is better)
Translates to: TILPSLSRIQNL*EKFDGSPAAQC
Trigger: ACACTGGGCTGCTGGTGACCCGTCAAACTTCTCCCACAAATTCTGAATCCGAGAAAGTGAAGGAAGGATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR-3UTR CAA 90 bp CACGTCACAGGTCTTAACTCTGCCTCGCAGGGGTTTTGGAAACTGTTCCTTCACAGGCACGTTCTGAATTaGTGTTGTTGCTCGTCCAAA +
Preference number: 3 (lower is better)
Translates to: HVTGLNSASQGFWKLFLHRHVLN*CCCSSK
Trigger: TTTGGACGAGCAACAACACAAATTCAGAACGTGCCT...GTGAAGGAACAGTTTCCAAAACCCCTGCGAGGCAGAGTTAAGACCTGTGACGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
3UTR TCA 72 bp GTACATGGATTACGTAAAGATACTTGGAAAAGAGCCTaGCCCCGTATGAATACAGCGCCTTGGCTCTCAGGG +
Preference number: 3 (lower is better)
Translates to: VHGLRKDTWKRA*PRMNTAPWLSG
Trigger: CCCTGAGAGCCAAGGCGCTGTATTCATACGGGGTCAGGCTCTTTTCCAAGTATCTTTACGTAATCCATGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR GCA 72 bp CGATCTGGAAAGAGGCACGTTCTGAATTTGTGTTGTTaGTCGTCCAAACATTGCACACTCGCGTGTTTCTGG +
Preference number: 3 (lower is better)
Translates to: RSGKRHVLNLCC*SSKHCTLACFW
Trigger: CCAGAAACACGCGAGTGTGCAATGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTTTCCAGATCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
3UTR GCA 72 bp ACACCCCAGAGGTGGACACCACCATGCTTTGCCGTCTaGCATCACTGTCATGAATTTCAGAGATGGATTTTT +
Preference number: 3 (lower is better)
Translates to: TPQRWTPPCFAV*HHCHEFQRWIF
Trigger: AAAAATCCATCTCTGAAATTCATGACAGTGATGGCAGACGGCAAAGCATGGTGGTGTCCACCTCTGGGGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR-3UTR CAA 90 bp CTGGGCATTGATATCCTCTGTATTTACTGTTTATGGCTCTCCAGACGTGATAAACGTGTAGGGTCACCCTaGACTGCCTCGACTACCTTC +
Preference number: 3 (lower is better)
Translates to: LGIDILCIYCLWLSRRDKRVGSP*TASTTF
Trigger: GAAGGTAGTCGAGGCAGTCAAGGGTGACCCTACACG...TTTATCACGTCTGGAGAGCCATAAACAGTAAATACAGAGGATATCAATGCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR TCA 72 bp TGGGGTCTTGTCCTGCAAGGTGTTGATTGGAGAATCTaGAAGAATAGAGAGCTGGTAGCCTCTCAAGCTGAA +
Preference number: 3 (lower is better)
Translates to: WGLVLQGVDWRI*KNRELVASQAE
Trigger: TTCAGCTTGAGAGGCTACCAGCTCTCTATTCTTTCAGATTCTCCAATCAACACCTTGCAGGACAAGACCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR TCA 72 bp TGCATTGGAAACTCTTCTGTCGCTATCGGCCTTCTCTaGAGAGCTTTAATCTCTCCTTCCATGGAGTCTCCT +
Preference number: 3 (lower is better)
Translates to: CIGNSSVAIGLL*RALISPSMESP
Trigger: AGGAGACTCCATGGAAGGAGAGATTAAAGCTCTTCAGAGAAGGCCGATAGCGACAGAAGAGTTTCCAATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR TCA 72 bp TTCACTTTCTCGGATTCAGAATTTGTGGGAGAAGTTTaGCGGGTCACCAGCAGCCCAGTGTTTCCAGAAACA +
Preference number: 3 (lower is better)
Translates to: FTFSDSEFVGEV*RVTSSPVFPET
Trigger: TGTTTCTGGAAACACTGGGCTGCTGGTGACCCGTCAAACTTCTCCCACAAATTCTGAATCCGAGAAAGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR CCA 72 bp GCCTTGGTGTTTAGGGAATGCTCATCCCTCCAACCTTaGCTTAGGATGATGAGTTGGGAAATAAAGTGTTCC +
Preference number: 3 (lower is better)
Translates to: ALVFRECSSLQP*LRMMSWEIKCS
Trigger: GGAACACTTTATTTCCCAACTCATCATCCTAAGCCAAGGTTGGAGGGATGAGCATTCCCTAAACACCAAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR-3UTR CAA 90 bp CTGCAGAAACAGCGTGATTTGGAGCCCACTGGGACAAAGCATTATATGCTTCTCCGTTCTGAATTTGTGTaGTTGCTCGTCCAAACATTG +
Preference number: 3 (lower is better)
Translates to: LQKQRDLEPTGTKHYMLLRSEFV*LLVQTL
Trigger: CAATGTTTGGACGAGCAACAACACAAATTCAGAACG...GAGAAGCATATAATGCTTTGTCCCAGTGGGCTCCAAATCACGCTGTTTCTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR TCA 72 bp TGCAAAAAGGCCAGAAACCACCAGACACTAACTTTTTaGCTAAGAACCAGGCCGGAAACCACATTGCTGATC +
Preference number: 3 (lower is better)
Translates to: CKKARNHQTLTF*LRTRPETTLLI
Trigger: GATCAGCAATGTGGTTTCCGGCCTGGTTCTTAGTCAAAAAGTTAGTGTCTGGTGGTTTCTGGCCTTTTTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR GCA 72 bp CACGTTCTGAATTTGTGTTGTTGCTCGTCCAAACATTaGACACTCGCGTGTTTCTGGGACACCAAAGTAAAA +
Preference number: 3 (lower is better)
Translates to: HVLNLCCCSSKH*TLACFWDTKVK
Trigger: TTTTACTTTGGTGTCCCAGAAACACGCGAGTGTGCAATGTTTGGACGAGCAACAACACAAATTCAGAACGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
3UTR-3UTR CAA 90 bp CTGGGCATTGATATCCTCTGTATTTACTGTTTATGGCTCTCCAGACGTGATAAAAAAAAGCATGCGACTTaGTTGATAAGAAAAGCTCCC +
Preference number: 3 (lower is better)
Translates to: LGIDILCIYCLWLSRRDKKKHAT*LIRKAP
Trigger: GGGAGCTTTTCTTATCAACAAAGTCGCATGCTTTTT...TTTATCACGTCTGGAGAGCCATAAACAGTAAATACAGAGGATATCAATGCCCAG
40% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp AGGAGCTGGCCGTGCTCCCACGCATTCAGGGGAGCGCTCACTTCTGACTGCTGCCCGCCCATGGCCAGGTaGGCCTGGCAGGCGTTGGGG +
Preference number: 4 (lower is better)
Translates to: RSWPCSHAFRGALTSDCCPPMAR*AWQALG
Trigger: CCCCAACGCCTGCCAGGCGCACCTGGCCATGGGCGG...GCAGCAGTCAGAAGTGAGCGCTCCCCTGAATGCGTGGGAGCACGGCCAGCTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp AGGAGCTGGCCGTGCTCCCACGCATTCAGGGGAGCGCTCACTTCTGACTGCTGCGCGGGCTCTGCCTCCTaGTCTGGGCTCCCAGCGCAG +
Preference number: 4 (lower is better)
Translates to: RSWPCSHAFRGALTSDCCAGSAS*SGLPAQ
Trigger: CTGCGCTGGGAGCCCAGAGCAGGAGGCAGAGCCCGC...GCAGCAGTCAGAAGTGAGCGCTCCCCTGAATGCGTGGGAGCACGGCCAGCTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp AGGAGCTGGCCGTGCTCCCACGCATTCAGGGGAGCGCTCACTTCTGACTGCTGCCCTCGGCTGGGCGCCTaGAGCGAGCTGCTCCCTGGT +
Preference number: 4 (lower is better)
Translates to: RSWPCSHAFRGALTSDCCPRLGA*SELLPG
Trigger: ACCAGGGAGCAGCTCGCTCCAGGCGCCCAGCCGAGG...GCAGCAGTCAGAAGTGAGCGCTCCCCTGAATGCGTGGGAGCACGGCCAGCTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp AGGAGCTGGCCGTGCTCCCACGCATTCAGGGGAGCGCTCACTTCTGACTGCTGCTCCGTGTGCTCAGCCTaGCATACAGCCGCGCCCACC +
Preference number: 4 (lower is better)
Translates to: RSWPCSHAFRGALTSDCCSVCSA*HTAAPT
Trigger: GGTGGGCGCGGCTGTATGGCAGGCTGAGCACACGGA...GCAGCAGTCAGAAGTGAGCGCTCCCCTGAATGCGTGGGAGCACGGCCAGCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR CAA 72 bp GGCCGCGGGAAGCCCACAGAGCCTCACCGGGTTCTGTaGGGTGTTATGAGAGGCGGCTGCAGCGATCCAACG +
Preference number: 4 (lower is better)
Translates to: GRGKPTEPHRVL*GVMRGGCSDPT
Trigger: CGTTGGATCGCTGCAGCCGCCTCTCATAACACCCAACAGAACCCGGTGAGGCTCTGTGGGCTTCCCGCGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR TCA 90 bp TTCTGGGACACCAAAGTAAAACGAATGCAGGGAACCGGCCGACCCGCCACGTCGCCATGCGGTGGCTCATaGCGCGTGCGAGGTGGCCCG +
Preference number: 4 (lower is better)
Translates to: FWDTKVKRMQGTGRPATSPCGGS*RVRGGP
Trigger: CGGGCCACCTCGCACGCGTCATGAGCCACCGCATGG...CGACGTGGCGGGTCGGCCGGTTCCCTGCATTCGTTTTACTTTGGTGTCCCAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR CCA 90 bp ACAGGAAGAGTCGGCGCTAACTCAACAGTGCATGTGCCCCTGGGTGTGGGGGACACGGGCTCCACGAAGTaGGACAGGAGCGCGCCCTGC +
Preference number: 4 (lower is better)
Translates to: TGRVGANSTVHVPLGVGDTGSTK*DRSAPC
Trigger: GCAGGGCGCGCTCCTGTCCCACTTCGTGGAGCCCGT...GTCCCCCACACCCAGGGGCACATGCACTGTTGAGTTAGCGCCGACTCTTCCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR CCA 90 bp AGGAGCTGGCCGTGCTCCCACGCATTCAGGGGAGCGCTCACTTCTGACTGCTGCAGGCTCACTCCTGCCTaGTGTCGTGTCGGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: RSWPCSHAFRGALTSDCCRLTPA*CRVGAS
Trigger: GGAGGCACCGACACGACACCAGGCAGGAGTGAGCCT...GCAGCAGTCAGAAGTGAGCGCTCCCCTGAATGCGTGGGAGCACGGCCAGCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp ACAGGAAGAGTCGGCGCTAACTCAACAGTGCATGTGCCCCTGGGTGTGGGGGACGAGCGAGCTGCTCCCTaGTCAGGGAGGGCGGGGAAG +
Preference number: 4 (lower is better)
Translates to: TGRVGANSTVHVPLGVGDERAAP*SGRAGK
Trigger: CTTCCCCGCCCTCCCTGACCAGGGAGCAGCTCGCTC...GTCCCCCACACCCAGGGGCACATGCACTGTTGAGTTAGCGCCGACTCTTCCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp TGTCGGTGCCTCCTTCCAAGGCTGCAGCTAAAACCCCTTTGCCTGAATGGAGCCGCCCTGCCGGGCGCGTaGCCGGGCATCTGGATGTCG +
Preference number: 4 (lower is better)
Translates to: CRCLLPRLQLKPLCLNGAALPGA*PGIWMS
Trigger: CGACATCCAGATGCCCGGCCACGCGCCCGGCAGGGC...GGCTCCATTCAGGCAAAGGGGTTTTAGCTGCAGCCTTGGAAGGAGGCACCGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp GCGTGCCTCCTGCGTGTAGGGTCACCCTTGACTGCCTCGACTACCTTCTCCTTTACAGCGGAGGCTGCCTaGCCGCGCAGCCGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: ACLLRVGSPLTASTTFSFTAEAA*PRSRSL
Trigger: CAGGGAACGGCTGCGCGGCCAGGCAGCCTCCGCTGT...AAAGGAGAAGGTAGTCGAGGCAGTCAAGGGTGACCCTACACGCAGGAGGCACGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR TCA 90 bp CGTGTAGGGTCACCCTTGACTGCCTCGACTACCTTCTCCTTTCACTACCCAGGGCCATGCGGTGGCTCATaGCGCGTGCGAGGTGGCCCG +
Preference number: 4 (lower is better)
Translates to: RVGSPLTASTTFSFHYPGPCGGS*RVRGGP
Trigger: CGGGCCACCTCGCACGCGTCATGAGCCACCGCATGG...CCCTGGGTAGTGAAAGGAGAAGGTAGTCGAGGCAGTCAAGGGTGACCCTACACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR TCA 90 bp TTCTGGGACACCAAAGTAAAACGAATGCAGGGAACCGGCCGACCCGCCACGTCGTGCAGGGACGGGGCCTaGGGCTCACTCCTGCCTGGT +
Preference number: 4 (lower is better)
Translates to: FWDTKVKRMQGTGRPATSCRDGA*GSLLPG
Trigger: ACCAGGCAGGAGTGAGCCTCAGGCCCCGTCCCTGCA...CGACGTGGCGGGTCGGCCGGTTCCCTGCATTCGTTTTACTTTGGTGTCCCAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR TCA 90 bp ACAGGAAGAGTCGGCGCTAACTCAACAGTGCATGTGCCCCTGGGTGTGGGGGACCTGTGCCCTCGAACGTaGGCCCGTTCACCTCCACCG +
Preference number: 4 (lower is better)
Translates to: TGRVGANSTVHVPLGVGDLCPRT*ARSPPP
Trigger: CGGTGGAGGTGAACGGGCTCACGTTCGAGGGCACAG...GTCCCCCACACCCAGGGGCACATGCACTGTTGAGTTAGCGCCGACTCTTCCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR TCA 90 bp AGGAGCTGGCCGTGCTCCCACGCATTCAGGGGAGCGCTCACTTCTGACTGCTGCCCTCTCACCAGGGTTTaGTCTGTCTGCGGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: RSWPCSHAFRGALTSDCCPLTRV*SVCGSR
Trigger: GCGGGAACCGCAGACAGATCAAACCCTGGTGAGAGG...GCAGCAGTCAGAAGTGAGCGCTCCCCTGAATGCGTGGGAGCACGGCCAGCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp ACAGGAAGAGTCGGCGCTAACTCAACAGTGCATGTGCCCCTGGGTGTGGGGGACCAGCCGCGCCCACCGTaGAGACAGCACGTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: TGRVGANSTVHVPLGVGDQPRPP*RQHVLA
Trigger: TGCAAGCACGTGCTGTCTGCACGGTGGGCGCGGCTG...GTCCCCCACACCCAGGGGCACATGCACTGTTGAGTTAGCGCCGACTCTTCCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR GCA 90 bp GCGTGCCTCCTGCGTGTAGGGTCACCCTTGACTGCCTCGACTACCTTCTCCTTTTCCTGCACCTGCACCTaGCTCCTTCCCGGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: ACLLRVGSPLTASTTFSFSCTCT*LLPGSR
Trigger: GCGGCTGCCGGGAAGGAGGCAGGTGCAGGTGCAGGA...AAAGGAGAAGGTAGTCGAGGCAGTCAAGGGTGACCCTACACGCAGGAGGCACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp ACAGGAAGAGTCGGCGCTAACTCAACAGTGCATGTGCCCCTGGGTGTGGGGGACCGCGCAGCCGTTCCCTaGGCCCCGTCCTGCAAAAAG +
Preference number: 4 (lower is better)
Translates to: TGRVGANSTVHVPLGVGDRAAVP*APSCKK
Trigger: CTTTTTGCAGGACGGGGCGCAGGGAACGGCTGCGCG...GTCCCCCACACCCAGGGGCACATGCACTGTTGAGTTAGCGCCGACTCTTCCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp ACAGGAAGAGTCGGCGCTAACTCAACAGTGCATGTGCCCCTGGGTGTGGGGGACATGACGCGTGCGAGGTaGCCCGTGTGGTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: TGRVGANSTVHVPLGVGDMTRAR*PVWCRL
Trigger: CAGCCTGCACCACACGGGCCACCTCGCACGCGTCAT...GTCCCCCACACCCAGGGGCACATGCACTGTTGAGTTAGCGCCGACTCTTCCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR CCA 90 bp CTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCAAGAGGCGGGCGACTTCCCCGGCTaGCGCGCCTCGGCGTCACTC +
Preference number: 4 (lower is better)
Translates to: LIFMCPLKLVRPQHHQEAGDFPG*RASASL
Trigger: GAGTGACGCCGAGGCGCGCCAGCCGGGGAAGTCGCC...CGCCTCTTGGTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR CCA 90 bp TTCTGGGACACCAAAGTAAAACGAATGCAGGGAACCGGCCGACCCGCCACGTCGCTCTGCCTCCTGCTCTaGGCTCCCAGCGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: FWDTKVKRMQGTGRPATSLCLLL*APSAGR
Trigger: CCTCCCTGCGCTGGGAGCCCAGAGCAGGAGGCAGAG...CGACGTGGCGGGTCGGCCGGTTCCCTGCATTCGTTTTACTTTGGTGTCCCAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp AGGAGCTGGCCGTGCTCCCACGCATTCAGGGGAGCGCTCACTTCTGACTGCTGCCCAGGACGTTCCACCTaGCGATCTTGTCCGTGCAGG +
Preference number: 4 (lower is better)
Translates to: RSWPCSHAFRGALTSDCCPGRST*RSCPCR
Trigger: CCTGCACGGACAAGATCGCCAGGTGGAACGTCCTGG...GCAGCAGTCAGAAGTGAGCGCTCCCCTGAATGCGTGGGAGCACGGCCAGCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp ACAGGAAGAGTCGGCGCTAACTCAACAGTGCATGTGCCCCTGGGTGTGGGGGACGCGTGTGGCGTGATCTaGTGTGGCGTGCCTCCTGCG +
Preference number: 4 (lower is better)
Translates to: TGRVGANSTVHVPLGVGDACGVI*CGVPPA
Trigger: CGCAGGAGGCACGCCACACCAGATCACGCCACACGC...GTCCCCCACACCCAGGGGCACATGCACTGTTGAGTTAGCGCCGACTCTTCCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp ACAGGAAGAGTCGGCGCTAACTCAACAGTGCATGTGCCCCTGGGTGTGGGGGACCCGTGTGGTGCAGGCTaGCCACCACGATGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: TGRVGANSTVHVPLGVGDPCGAG*PPRCSA
Trigger: TGCAGAGCATCGTGGTGGGCAGCCTGCACCACACGG...GTCCCCCACACCCAGGGGCACATGCACTGTTGAGTTAGCGCCGACTCTTCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR GCA 90 bp GCTTCCCAGAAACAGCCTGAGAAGGAAGCTCCTCTGTCTCCACCGCATCTCTGGCCCGGCCTCAGCTCGTaGAGCTGCACCAGCGCGTTC +
Preference number: 4 (lower is better)
Translates to: ASQKQPEKEAPLSPPHLWPGLSS*SCTSAF
Trigger: GAACGCGCTGGTGCAGCTGCACGAGCTGAGGCCGGG...CCAGAGATGCGGTGGAGACAGAGGAGCTTCCTTCTCAGGCTGTTTCTGGGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp ACAGGAAGAGTCGGCGCTAACTCAACAGTGCATGTGCCCCTGGGTGTGGGGGACCAGTGCATGTGCCCCTaGGTGTGGGGGACAGGGTTC +
Preference number: 4 (lower is better)
Translates to: TGRVGANSTVHVPLGVGDQCMCP*VWGTGF
Trigger: GAACCCTGTCCCCCACACCCAGGGGCACATGCACTG...GTCCCCCACACCCAGGGGCACATGCACTGTTGAGTTAGCGCCGACTCTTCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR CCA 90 bp ACGGAAAGGCTCCGGCACCTCAACCTCACTCTGGCTGCATTGGAAACTCTTCTGCCAGGACCGAGGCCATaGCCGAGACCCAGGCGCGGA +
Preference number: 4 (lower is better)
Translates to: TERLRHLNLTLAALETLLPGPRP*PRPRRG
Trigger: TCCGCGCCTGGGTCTCGGCCATGGCCTCGGTCCTGG...CAGAAGAGTTTCCAATGCAGCCAGAGTGAGGTTGAGGTGCCGGAGCCTTTCCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp GCTTCCCAGAAACAGCCTGAGAAGGAAGCTCCTCTGTCTCCACCGCATCTCTGGAACCGGGGCTGGAGGTaGACAGCGGAGGCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: ASQKQPEKEAPLSPPHLWNRGWR*TAEAAW
Trigger: CCAGGCAGCCTCCGCTGTCCACCTCCAGCCCCGGTT...CCAGAGATGCGGTGGAGACAGAGGAGCTTCCTTCTCAGGCTGTTTCTGGGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp ACTCCACAGGAAGAGTCGGCGCTAACTCAACAGTGCATGTGCCCCTGGGTGTGGGCCCTGCTCCTGCAGTaGCGAGGAACCCAGACAGCG +
Preference number: 4 (lower is better)
Translates to: TPQEESALTQQCMCPWVWALLLQ*RGTQTA
Trigger: CGCTGTCTGGGTTCCTCGCCACTGCAGGAGCAGGGC...CCACACCCAGGGGCACATGCACTGTTGAGTTAGCGCCGACTCTTCCTGTGGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp TTCTGGGACACCAAAGTAAAACGAATGCAGGGAACCGGCCGACCCGCCACGTCGAGACCTCCTCCTGGGTaGGGGCCACGGCAGCAGAAC +
Preference number: 4 (lower is better)
Translates to: FWDTKVKRMQGTGRPATSRPPPG*GPRQQN
Trigger: GTTCTGCTGCCGTGGCCCCCACCCAGGAGGAGGTCT...CGACGTGGCGGGTCGGCCGGTTCCCTGCATTCGTTTTACTTTGGTGTCCCAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR TCA 90 bp CGTGTAGGGTCACCCTTGACTGCCTCGACTACCTTCTCCTTTCACTACCCAGGGCCGCGCTGCTGGTACTaGGGGTGTCGTCATCCTCCG +
Preference number: 4 (lower is better)
Translates to: RVGSPLTASTTFSFHYPGPRCWY*GCRHPP
Trigger: CGGAGGATGACGACACCCTCAGTACCAGCAGCGCGG...CCCTGGGTAGTGAAAGGAGAAGGTAGTCGAGGCAGTCAAGGGTGACCCTACACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR TCA 90 bp AGGAGCTGGCCGTGCTCCCACGCATTCAGGGGAGCGCTCACTTCTGACTGCTGCTGTGCAGGTCTGTGGTaGTCTCGTAGGGAGAGTGGA +
Preference number: 4 (lower is better)
Translates to: RSWPCSHAFRGALTSDCCCAGLW*SRRESG
Trigger: TCCACTCTCCCTACGAGATCACCACAGACCTGCACA...GCAGCAGTCAGAAGTGAGCGCTCCCCTGAATGCGTGGGAGCACGGCCAGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR TCA 90 bp GCGTGCCTCCTGCGTGTAGGGTCACCCTTGACTGCCTCGACTACCTTCTCCTTTCCAGCTGTGGCTTCATaGTGCTGGCCACTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: ACLLRVGSPLTASTTFSFPAVAS*CWPLGG
Trigger: GCCACCCAGTGGCCAGCATCATGAAGCCACAGCTGG...AAAGGAGAAGGTAGTCGAGGCAGTCAAGGGTGACCCTACACGCAGGAGGCACGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp TTCTGGGACACCAAAGTAAAACGAATGCAGGGAACCGGCCGACCCGCCACGTCGGGCTGCCCACCACGATaGTCTGCAGGTACACGGGCT +
Preference number: 4 (lower is better)
Translates to: FWDTKVKRMQGTGRPATSGCPPR*SAGTRA
Trigger: AGCCCGTGTACCTGCAGAGCATCGTGGTGGGCAGCC...CGACGTGGCGGGTCGGCCGGTTCCCTGCATTCGTTTTACTTTGGTGTCCCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR GCA 90 bp TGTCGGTGCCTCCTTCCAAGGCTGCAGCTAAAACCCCTTTGCCTGAATGGAGCCAGGTGGCCCGTGTGGTaGAGGCTGCCCACCACGATG +
Preference number: 4 (lower is better)
Translates to: CRCLLPRLQLKPLCLNGARWPVW*RLPTTM
Trigger: CATCGTGGTGGGCAGCCTGCACCACACGGGCCACCT...GGCTCCATTCAGGCAAAGGGGTTTTAGCTGCAGCCTTGGAAGGAGGCACCGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR GCA 90 bp TGTCGGTGCCTCCTTCCAAGGCTGCAGCTAAAACCCCTTTGCCTGAATGGAGCCGTGGCTCATGACGCGTaGGAGGTGGCCCGTGTGGTG +
Preference number: 4 (lower is better)
Translates to: CRCLLPRLQLKPLCLNGAVAHDA*EVARVV
Trigger: CACCACACGGGCCACCTCGCACGCGTCATGAGCCAC...GGCTCCATTCAGGCAAAGGGGTTTTAGCTGCAGCCTTGGAAGGAGGCACCGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR GCA 90 bp TGTCGGTGCCTCCTTCCAAGGCTGCAGCTAAAACCCCTTTGCCTGAATGGAGCCCAGACAGCACGTGCTTaGAGAGCCGGGATGGGCCCC +
Preference number: 4 (lower is better)
Translates to: CRCLLPRLQLKPLCLNGAQTARA*RAGMGP
Trigger: GGGGCCCATCCCGGCTCTGCAAGCACGTGCTGTCTG...GGCTCCATTCAGGCAAAGGGGTTTTAGCTGCAGCCTTGGAAGGAGGCACCGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR GCA 90 bp ACTCCACAGGAAGAGTCGGCGCTAACTCAACAGTGCATGTGCCCCTGGGTGTGGCGTGCAGACAGCACGTaGTTGCAGAGCCGGGATGGG +
Preference number: 4 (lower is better)
Translates to: TPQEESALTQQCMCPWVWRADST*LQSRDG
Trigger: CCCATCCCGGCTCTGCAAGCACGTGCTGTCTGCACG...CCACACCCAGGGGCACATGCACTGTTGAGTTAGCGCCGACTCTTCCTGTGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR CCA 90 bp GCGTGCCTCCTGCGTGTAGGGTCACCCTTGACTGCCTCGACTACCTTCTCCTTTACACCCTCCATGCGGTaGCTCATGACGCGTGCGAGG +
Preference number: 4 (lower is better)
Translates to: ACLLRVGSPLTASTTFSFTPSMR*LMTRAR
Trigger: CCTCGCACGCGTCATGAGCCACCGCATGGAGGGTGT...AAAGGAGAAGGTAGTCGAGGCAGTCAAGGGTGACCCTACACGCAGGAGGCACGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp GCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCAAGAGGCCTTGCAGAGCCGGGATaGGCCCCCACAGCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: AYLHVPPQASETPASPRGLAEPG*APTAPP
Trigger: CGGAGGAGCTGTGGGGGCCCATCCCGGCTCTGCAAG...GCCTCTTGGTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR CCA 90 bp ACTCCACAGGAAGAGTCGGCGCTAACTCAACAGTGCATGTGCCCCTGGGTGTGGAGGCTCACTCCTGCCTaGTGTCGTGTCGGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: TPQEESALTQQCMCPWVWRLTPA*CRVGAS
Trigger: GGAGGCACCGACACGACACCAGGCAGGAGTGAGCCT...CCACACCCAGGGGCACATGCACTGTTGAGTTAGCGCCGACTCTTCCTGTGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR CCA 90 bp CATTTGTGGCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACTTGCTCCCACTGGGCTaGGGGCCTCGGCTGGGCGCC +
Preference number: 4 (lower is better)
Translates to: HLWLIFMCPLKLVRPQHHLLPLG*GPRLGA
Trigger: GGCGCCCAGCCGAGGCCCCCAGCCCAGTGGGAGCAA...GTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGCCACAAATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp CATTTGTGGCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACGCATTGGCGTCCTCCTaGCCCTGCCGGGCGCGTGGC +
Preference number: 4 (lower is better)
Translates to: HLWLIFMCPLKLVRPQHHALASS*PCRARG
Trigger: GCCACGCGCCCGGCAGGGCCAGGAGGACGCCAATGC...GTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGCCACAAATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp GCGTGCCTCCTGCGTGTAGGGTCACCCTTGACTGCCTCGACTACCTTCTCCTTTGGAGCAGCCTGCGTGTaGCGTGATCTGGTGTGGCGT +
Preference number: 4 (lower is better)
Translates to: ACLLRVGSPLTASTTFSFGAACV*RDLVWR
Trigger: ACGCCACACCAGATCACGCCACACGCAGGCTGCTCC...AAAGGAGAAGGTAGTCGAGGCAGTCAAGGGTGACCCTACACGCAGGAGGCACGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp AAAGCCCCCATGTCCCATCTCCACTGTGAGCTGAAGGTCTCTGGTGTTGGAAGCCCTGAGACCTCCTCCTaGGTGGGGGCCACGGCAGCA +
Preference number: 4 (lower is better)
Translates to: KAPMSHLHCELKVSGVGSPETSS*VGATAA
Trigger: TGCTGCCGTGGCCCCCACCCAGGAGGAGGTCTCAGG...GCTTCCAACACCAGAGACCTTCAGCTCACAGTGGAGATGGGACATGGGGGCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR TCA 90 bp GCGTGCCTCCTGCGTGTAGGGTCACCCTTGACTGCCTCGACTACCTTCTCCTTTCCCAGGCCAGCCTTCTaGAAGGCCTTGAACAGCTGC +
Preference number: 4 (lower is better)
Translates to: ACLLRVGSPLTASTTFSFPRPAF*KALNSC
Trigger: GCAGCTGTTCAAGGCCTTTCAGAAGGCTGGCCTGGG...AAAGGAGAAGGTAGTCGAGGCAGTCAAGGGTGACCCTACACGCAGGAGGCACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp TGTCGGTGCCTCCTTCCAAGGCTGCAGCTAAAACCCCTTTGCCTGAATGGAGCCCCCACCACGATGCTCTaGAGGTACACGGGCTCCACG +
Preference number: 4 (lower is better)
Translates to: CRCLLPRLQLKPLCLNGAPTTML*RYTGST
Trigger: CGTGGAGCCCGTGTACCTGCAGAGCATCGTGGTGGG...GGCTCCATTCAGGCAAAGGGGTTTTAGCTGCAGCCTTGGAAGGAGGCACCGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR GCA 90 bp TGTCGGTGCCTCCTTCCAAGGCTGCAGCTAAAACCCCTTTGCCTGAATGGAGCCTCTCCAGGTCCGCGCTaGCCACGACCCAGTTCATGC +
Preference number: 4 (lower is better)
Translates to: CRCLLPRLQLKPLCLNGASPGPR*PRPSSC
Trigger: GCATGAACTGGGTCGTGGGCAGCGCGGACCTGGAGA...GGCTCCATTCAGGCAAAGGGGTTTTAGCTGCAGCCTTGGAAGGAGGCACCGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR GCA 90 bp TGTCGGTGCCTCCTTCCAAGGCTGCAGCTAAAACCCCTTTGCCTGAATGGAGCCCGTGCAGACAGCACGTaGTTGCAGAGCCGGGATGGG +
Preference number: 4 (lower is better)
Translates to: CRCLLPRLQLKPLCLNGARADST*LQSRDG
Trigger: CCCATCCCGGCTCTGCAAGCACGTGCTGTCTGCACG...GGCTCCATTCAGGCAAAGGGGTTTTAGCTGCAGCCTTGGAAGGAGGCACCGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR GCA 90 bp ACAGGAAGAGTCGGCGCTAACTCAACAGTGCATGTGCCCCTGGGTGTGGGGGACGTTTCCTCACCCAGGTaGCCAGGCCAGCCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: TGRVGANSTVHVPLGVGDVSSPR*PGQPSE
Trigger: TTCAGAAGGCTGGCCTGGGCACCTGGGTGAGGAAAC...GTCCCCCACACCCAGGGGCACATGCACTGTTGAGTTAGCGCCGACTCTTCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR GCA 90 bp GCTTCCCAGAAACAGCCTGAGAAGGAAGCTCCTCTGTCTCCACCGCATCTCTGGCTCAGCTCGTGCAGCTaGACCAGCGCGTTCTTGGGC +
Preference number: 4 (lower is better)
Translates to: ASQKQPEKEAPLSPPHLWLSSCS*TSAFLG
Trigger: GCCCAAGAACGCGCTGGTGCAGCTGCACGAGCTGAG...CCAGAGATGCGGTGGAGACAGAGGAGCTTCCTTCTCAGGCTGTTTCTGGGAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp CTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCAAGAGGCGGACACTGTCCGGTACTaGAGGCCCGGCCTCAGCTCG +
Preference number: 4 (lower is better)
Translates to: LIFMCPLKLVRPQHHQEADTVRY*RPGLSS
Trigger: CGAGCTGAGGCCGGGCCTGCAGTACCGGACAGTGTC...CGCCTCTTGGTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp TGTCGGTGCCTCCTTCCAAGGCTGCAGCTAAAACCCCTTTGCCTGAATGGAGCCGCTTTATGGCGGGCGTaGATGGGCGTGAGGTCCGTC +
Preference number: 4 (lower is better)
Translates to: CRCLLPRLQLKPLCLNGAALWRA*MGVRSV
Trigger: GACGGACCTCACGCCCATGCACGCCCGCCATAAAGC...GGCTCCATTCAGGCAAAGGGGTTTTAGCTGCAGCCTTGGAAGGAGGCACCGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp AGGAGCTGGCCGTGCTCCCACGCATTCAGGGGAGCGCTCACTTCTGACTGCTGCCTGGTGTTGGAAGCCTaGTCTGAGGGTCACAGAATC +
Preference number: 4 (lower is better)
Translates to: RSWPCSHAFRGALTSDCCLVLEA*SEGHRI
Trigger: GATTCTGTGACCCTCAGAGCAGGCTTCCAACACCAG...GCAGCAGTCAGAAGTGAGCGCTCCCCTGAATGCGTGGGAGCACGGCCAGCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp TTCTGGGACACCAAAGTAAAACGAATGCAGGGAACCGGCCGACCCGCCACGTCGCCCTGCGCCCCGTCCTaGAAAAAGGCCAGAAACCAC +
Preference number: 4 (lower is better)
Translates to: FWDTKVKRMQGTGRPATSPCAPS*KKARNH
Trigger: GTGGTTTCTGGCCTTTTTGCAGGACGGGGCGCAGGG...CGACGTGGCGGGTCGGCCGGTTCCCTGCATTCGTTTTACTTTGGTGTCCCAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp TTCTGGGACACCAAAGTAAAACGAATGCAGGGAACCGGCCGACCCGCCACGTCGTGGCCTCACAGTACATaGAGGGCGTGTCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: FWDTKVKRMQGTGRPATSWPHST*RACLQG
Trigger: GCCCTGGAGACACGCCCTCCATGTACTGTGAGGCCA...CGACGTGGCGGGTCGGCCGGTTCCCTGCATTCGTTTTACTTTGGTGTCCCAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR CCA 90 bp ACTCCACAGGAAGAGTCGGCGCTAACTCAACAGTGCATGTGCCCCTGGGTGTGGTGTGCGCCCCCAGCTTaGCCTCACAGTACATGGAGG +
Preference number: 4 (lower is better)
Translates to: TPQEESALTQQCMCPWVWCAPPA*PHSTWR
Trigger: CCTCCATGTACTGTGAGGCCAAGCTGGGGGCGCACA...CCACACCCAGGGGCACATGCACTGTTGAGTTAGCGCCGACTCTTCCTGTGGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR CCA 90 bp GCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCAAGAGGCCCGCCGCGCGCATCTTaGCCTTCTTCTTGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: AYLHVPPQASETPASPRGPPRAS*PSSWWG
Trigger: GCCCCACCAAGAAGAAGGCCAAGATGCGCGCGGCGG...GCCTCTTGGTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp GCGTGCCTCCTGCGTGTAGGGTCACCCTTGACTGCCTCGACTACCTTCTCCTTTTCTTGCCCCCTCACTTaGAGGGGAATGGGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: ACLLRVGSPLTASTTFSFSCPLT*RGMGGH
Trigger: GTGGCCACCCATTCCCCTCCAAGTGAGGGGGCAAGA...AAAGGAGAAGGTAGTCGAGGCAGTCAAGGGTGACCCTACACGCAGGAGGCACGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp GCGTGCCTCCTGCGTGTAGGGTCACCCTTGACTGCCTCGACTACCTTCTCCTTTCTTGGCGGTGTCAGGTaGTGGGAAGTGCGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: ACLLRVGSPLTASTTFSFLGGVR*WEVRGS
Trigger: GCTTCCTCGCACTTCCCACCACCTGACACCGCCAAG...AAAGGAGAAGGTAGTCGAGGCAGTCAAGGGTGACCCTACACGCAGGAGGCACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR TCA 90 bp CATTTGTGGCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCGTCACTCACGCCGCTaGGGAGAGGCCGGTTGTGCC +
Preference number: 4 (lower is better)
Translates to: HLWLIFMCPLKLVRPQHHRHSRR*GEAGCA
Trigger: GGCACAACCGGCCTCTCCTCAGCGGCGTGAGTGACG...GTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGCCACAAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR TCA 90 bp CACGTCACAGGTCTTAACTCTGCCTCGCAGGGGTTTTGGAAACTGTTCCTTCACTGCAGGGACGGGGCCTaGGGCTCACTCCTGCCTGGT +
Preference number: 4 (lower is better)
Translates to: HVTGLNSASQGFWKLFLHCRDGA*GSLLPG
Trigger: ACCAGGCAGGAGTGAGCCTCAGGCCCCGTCCCTGCA...GTGAAGGAACAGTTTCCAAAACCCCTGCGAGGCAGAGTTAAGACCTGTGACGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR TCA 90 bp ACGGAAAGGCTCCGGCACCTCAACCTCACTCTGGCTGCATTGGAAACTCTTCTGGGGATGGCGGCTCCCTaGCATGGACTAGGGGACTCT +
Preference number: 4 (lower is better)
Translates to: TERLRHLNLTLAALETLLGMAAP*HGLGDS
Trigger: AGAGTCCCCTAGTCCATGTCAGGGAGCCGCCATCCC...CAGAAGAGTTTCCAATGCAGCCAGAGTGAGGTTGAGGTGCCGGAGCCTTTCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp GCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCAAGAGGCCCGTGTGGTGCAGGCTaGCCACCACGATGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: AYLHVPPQASETPASPRGPCGAG*PPRCSA
Trigger: TGCAGAGCATCGTGGTGGGCAGCCTGCACCACACGG...GCCTCTTGGTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR GCA 90 bp CTCTCACCAGGGTTTGATCTGTCTGCGGTTCCCGCAGGAGTGATATTGTTTGGTGCCGCGCGGCCAGGTTaGCCACGTTGCGGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: LSPGFDLSAVPAGVILFGAARPG*PRCGSP
Trigger: AGGAGAACCGCAACGTGGGCAACCTGGCCGCGCGGC...ACCAAACAATATCACTCCTGCGGGAACCGCAGACAGATCAAACCCTGGTGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp TTTGTGGCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCAGGCTGGGTCAGGCCCTaGCAGTTGGGAGCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: FVAYLHVPPQASETPASPGWVRP*QLGAAC
Trigger: GCAGGCTGCTCCCAACTGGCAGGGCCTGACCCAGCC...TGGTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGCCACAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp ACGGAAAGGCTCCGGCACCTCAACCTCACTCTGGCTGCATTGGAAACTCTTCTGGCCTGGGGGTGCTACTaGCTCTCCTGCAACACAGGG +
Preference number: 4 (lower is better)
Translates to: TERLRHLNLTLAALETLLAWGCY*LSCNTG
Trigger: CCCTGTGTTGCAGGAGAGGCAGTAGCACCCCCAGGC...CAGAAGAGTTTCCAATGCAGCCAGAGTGAGGTTGAGGTGCCGGAGCCTTTCCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp CTGCAGAAACAGCGTGATTTGGAGCCCACTGGGACAAAGCATTATATGCTTCTCGGCGACTTCCCCGGCTaGCGCGCCTCGGCGTCACTC +
Preference number: 4 (lower is better)
Translates to: LQKQRDLEPTGTKHYMLLGDFPG*RASASL
Trigger: GAGTGACGCCGAGGCGCGCCAGCCGGGGAAGTCGCC...GAGAAGCATATAATGCTTTGTCCCAGTGGGCTCCAAATCACGCTGTTTCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp ACAGGAAGAGTCGGCGCTAACTCAACAGTGCATGTGCCCCTGGGTGTGGGGGACCTGGGGCCAGCGATCTaGAAAGAGGCACGTTCTGAA +
Preference number: 4 (lower is better)
Translates to: TGRVGANSTVHVPLGVGDLGPAI*KEARSE
Trigger: TTCAGAACGTGCCTCTTTCCAGATCGCTGGCCCCAG...GTCCCCCACACCCAGGGGCACATGCACTGTTGAGTTAGCGCCGACTCTTCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR CCA 90 bp CGTGTAGGGTCACCCTTGACTGCCTCGACTACCTTCTCCTTTCACTACCCAGGGTGGGGGACAGGGTTCTaGGGCCAGCGATCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: RVGSPLTASTTFSFHYPGWGTGF*GQRSGK
Trigger: CTTTCCAGATCGCTGGCCCCAGAACCCTGTCCCCCA...CCCTGGGTAGTGAAAGGAGAAGGTAGTCGAGGCAGTCAAGGGTGACCCTACACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp TTCTGGGACACCAAAGTAAAACGAATGCAGGGAACCGGCCGACCCGCCACGTCGTCTGGGGTGGTCAGCTaGGATTCTTTCCGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: FWDTKVKRMQGTGRPATSSGVVS*DSFREA
Trigger: GGCTTCCCGGAAAGAATCCCAGCTGACCACCCCAGA...CGACGTGGCGGGTCGGCCGGTTCCCTGCATTCGTTTTACTTTGGTGTCCCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp CTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCAAGAGGCGCATGATGCTGGCCACTaGGTGGCCGAGCGCTTTCCG +
Preference number: 4 (lower is better)
Translates to: LIFMCPLKLVRPQHHQEAHDAGH*VAERFP
Trigger: CGGAAAGCGCTCGGCCACCCAGTGGCCAGCATCATG...CGCCTCTTGGTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp CTCTCACCAGGGTTTGATCTGTCTGCGGTTCCCGCAGGAGTGATATTGTTTGGTGGACCTGGCCCTTCCTaGCTGGGTCAGGCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: LSPGFDLSAVPAGVILFGGPGPS*LGQALP
Trigger: TGGCAGGGCCTGACCCAGCCAGGAAGGGCCAGGTCC...ACCAAACAATATCACTCCTGCGGGAACCGCAGACAGATCAAACCCTGGTGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp TGTCGGTGCCTCCTTCCAAGGCTGCAGCTAAAACCCCTTTGCCTGAATGGAGCCACGGTGATTTCGAGGTaGACTTGGAGGGGCGGGCCT +
Preference number: 4 (lower is better)
Translates to: CRCLLPRLQLKPLCLNGATVISR*TWRGGP
Trigger: AGGCCCGCCCCTCCAAGTCCACCTCGAAATCACCGT...GGCTCCATTCAGGCAAAGGGGTTTTAGCTGCAGCCTTGGAAGGAGGCACCGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp GCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCAAGAGGCCTGCAAAACCGGGGCTaGAGGTGGACAGCGGAGGCT +
Preference number: 4 (lower is better)
Translates to: AYLHVPPQASETPASPRGLQNRG*RWTAEA
Trigger: AGCCTCCGCTGTCCACCTCCAGCCCCGGTTTTGCAG...GCCTCTTGGTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp GCTTCCCAGAAACAGCCTGAGAAGGAAGCTCCTCTGTCTCCACCGCATCTCTGGGGCGAGGACAGGCTTTaGAGGTATGTGGGATGGCGG +
Preference number: 4 (lower is better)
Translates to: ASQKQPEKEAPLSPPHLWGEDRL*RYVGWR
Trigger: CCGCCATCCCACATACCTCCAAAGCCTGTCCTCGCC...CCAGAGATGCGGTGGAGACAGAGGAGCTTCCTTCTCAGGCTGTTTCTGGGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp CGTGTAGGGTCACCCTTGACTGCCTCGACTACCTTCTCCTTTCACTACCCAGGGCTGCTAAGAGCTGCCTaGGGGTGCTACTGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: RVGSPLTASTTFSFHYPGLLRAA*GCYCLS
Trigger: GGAGAGGCAGTAGCACCCCCAGGCAGCTCTTAGCAG...CCCTGGGTAGTGAAAGGAGAAGGTAGTCGAGGCAGTCAAGGGTGACCCTACACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR TCA 90 bp CGTGTAGGGTCACCCTTGACTGCCTCGACTACCTTCTCCTTTCACTACCCAGGGCTCACTTTTCAGGACTaGGCAGGAAAGCGCGCTCCG +
Preference number: 4 (lower is better)
Translates to: RVGSPLTASTTFSFHYPGLTFQD*AGKRAP
Trigger: CGGAGCGCGCTTTCCTGCTCAGTCCTGAAAAGTGAG...CCCTGGGTAGTGAAAGGAGAAGGTAGTCGAGGCAGTCAAGGGTGACCCTACACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR TCA 90 bp GCTTCCCAGAAACAGCCTGAGAAGGAAGCTCCTCTGTCTCCACCGCATCTCTGGGCTGCAGAAACAGCGTaGTTTGGAGCCCACTGGGAC +
Preference number: 4 (lower is better)
Translates to: ASQKQPEKEAPLSPPHLWAAETA*FGAHWD
Trigger: GTCCCAGTGGGCTCCAAATCACGCTGTTTCTGCAGC...CCAGAGATGCGGTGGAGACAGAGGAGCTTCCTTCTCAGGCTGTTTCTGGGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR TCA 90 bp GCGTGCCTCCTGCGTGTAGGGTCACCCTTGACTGCCTCGACTACCTTCTCCTTTTTCTGTTGGGTGTTATaGGAGGCGGCTGCAGCGATC +
Preference number: 4 (lower is better)
Translates to: ACLLRVGSPLTASTTFSFFCWVL*EAAAAI
Trigger: GATCGCTGCAGCCGCCTCTCATAACACCCAACAGAA...AAAGGAGAAGGTAGTCGAGGCAGTCAAGGGTGACCCTACACGCAGGAGGCACGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR TCA 90 bp TTCTGGGACACCAAAGTAAAACGAATGCAGGGAACCGGCCGACCCGCCACGTCGTTTGTGGGAGAAGTTTaGCGGGTCACCAGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: FWDTKVKRMQGTGRPATSFVGEV*RVTSSP
Trigger: TGGGCTGCTGGTGACCCGTCAAACTTCTCCCACAAA...CGACGTGGCGGGTCGGCCGGTTCCCTGCATTCGTTTTACTTTGGTGTCCCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp TTTGTGGCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCAGTGGCTCATGACGCGTaGGAGGTGGCCCGTGTGGTG +
Preference number: 4 (lower is better)
Translates to: FVAYLHVPPQASETPASPVAHDA*EVARVV
Trigger: CACCACACGGGCCACCTCGCACGCGTCATGAGCCAC...TGGTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGCCACAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR GCA 90 bp CACGTCACAGGTCTTAACTCTGCCTCGCAGGGGTTTTGGAAACTGTTCCTTCACCAGCCGCGCCCACCGTaGAGACAGCACGTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: HVTGLNSASQGFWKLFLHQPRPP*RQHVLA
Trigger: TGCAAGCACGTGCTGTCTGCACGGTGGGCGCGGCTG...GTGAAGGAACAGTTTCCAAAACCCCTGCGAGGCAGAGTTAAGACCTGTGACGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR GCA 90 bp TGTCGGTGCCTCCTTCCAAGGCTGCAGCTAAAACCCCTTTGCCTGAATGGAGCCGTTTCCTCACCCAGGTaGCCAGGCCAGCCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: CRCLLPRLQLKPLCLNGAVSSPR*PGQPSE
Trigger: TTCAGAAGGCTGGCCTGGGCACCTGGGTGAGGAAAC...GGCTCCATTCAGGCAAAGGGGTTTTAGCTGCAGCCTTGGAAGGAGGCACCGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR GCA 90 bp TGTCGGTGCCTCCTTCCAAGGCTGCAGCTAAAACCCCTTTGCCTGAATGGAGCCACTCAACAGTGCATGTaGCCCTGGGTGTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: CRCLLPRLQLKPLCLNGATQQCM*PWVWGT
Trigger: TGTCCCCCACACCCAGGGGCACATGCACTGTTGAGT...GGCTCCATTCAGGCAAAGGGGTTTTAGCTGCAGCCTTGGAAGGAGGCACCGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR GCA 90 bp TTGTTGCTCGTCCAAACATTGCACACTCGCGTGTTTCTGGGACACCAAAGTAAAGCGCGGCGTCCTGAGTaGTCCGAGCTTCCCGCGGGC +
Preference number: 4 (lower is better)
Translates to: LLLVQTLHTRVFLGHQSKARRPE*SELPAG
Trigger: GCCCGCGGGAAGCTCGGAGCACTCAGGACGCCGCGC...TTTACTTTGGTGTCCCAGAAACACGCGAGTGTGCAATGTTTGGACGAGCAACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp AAAGCCCCCATGTCCCATCTCCACTGTGAGCTGAAGGTCTCTGGTGTTGGAAGCCCAGGTTGCCCACGTTaGGGTTCTCCTTCACCTCCG +
Preference number: 4 (lower is better)
Translates to: KAPMSHLHCELKVSGVGSPGCPR*GSPSPP
Trigger: CGGAGGTGAAGGAGAACCGCAACGTGGGCAACCTGG...GCTTCCAACACCAGAGACCTTCAGCTCACAGTGGAGATGGGACATGGGGGCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp TCACCAGGGTTTGATCTGTCTGCGGTTCCCGCAGGAGTGATATTGTTTGGTGTGTGCACCGGGCCCGTCTaGGACACTGTCCGGTACTGC +
Preference number: 4 (lower is better)
Translates to: SPGFDLSAVPAGVILFGVCTGPV*DTVRYC
Trigger: GCAGTACCGGACAGTGTCGCAGACGGGCCCGGTGCA...CACACCAAACAATATCACTCCTGCGGGAACCGCAGACAGATCAAACCCTGGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp TCACCAGGGTTTGATCTGTCTGCGGTTCCCGCAGGAGTGATATTGTTTGGTGTGCCGCTCGGCCGGTTCTaGCAGACACACGTAGCGCAG +
Preference number: 4 (lower is better)
Translates to: SPGFDLSAVPAGVILFGVPLGRF*QTHVAQ
Trigger: CTGCGCTACGTGTGTCTGGCAGAACCGGCCGAGCGG...CACACCAAACAATATCACTCCTGCGGGAACCGCAGACAGATCAAACCCTGGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp CCAGCGATCTGGAAAGAGGCACGTTCTGAATTTGTGTTGTTGCTCGTCCAAACACCCGGGCCAGCTTCTTaGTGCGCCCCGAGCCCTCGA +
Preference number: 4 (lower is better)
Translates to: PAIWKEARSEFVLLLVQTPGPAS*CAPSPR
Trigger: TCGAGGGCTCGGGGCGCAGCAAGAAGCTGGCCCGGG...TGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTTTCCAGATCGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp AAAGCCCCCATGTCCCATCTCCACTGTGAGCTGAAGGTCTCTGGTGTTGGAAGCGGGAGAGTGGAGTCTTaGGTCTCCACAGGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: KAPMSHLHCELKVSGVGSGRVES*VSTGGG
Trigger: ACCTCCCCCTGTGGAGACGCAAGACTCCACTCTCCC...GCTTCCAACACCAGAGACCTTCAGCTCACAGTGGAGATGGGACATGGGGGCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp GCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCAAGAGGCATCTTGGTGCGCAGGTaGCCGCGGAACTTCCTGACG +
Preference number: 4 (lower is better)
Translates to: AYLHVPPQASETPASPRGILVRR*PRNFLT
Trigger: CGTCAGGAAGTTCCGCGGGCACCTGCGCACCAAGAT...GCCTCTTGGTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp AAGAGGCACGTTCTGAATTTGTGTTGTTGCTCGTCCAAACATTGCACACTCGCGACGCCGTCCCAGGTCTaGACTGCGCTGGGGCCACGC +
Preference number: 4 (lower is better)
Translates to: KRHVLNLCCCSSKHCTLATPSQV*TALGPR
Trigger: GCGTGGCCCCAGCGCAGTGCAGACCTGGGACGGCGT...CGCGAGTGTGCAATGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp GCGTGCCTCCTGCGTGTAGGGTCACCCTTGACTGCCTCGACTACCTTCTCCTTTGCGCTCACTTCTGACTaGTGCGAATGTCTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: ACLLRVGSPLTASTTFSFALTSD*CECLSH
Trigger: GTGGCTCAGACATTCGCAGCAGTCAGAAGTGAGCGC...AAAGGAGAAGGTAGTCGAGGCAGTCAAGGGTGACCCTACACGCAGGAGGCACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp TTTGTGGCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCAGTGAGCGGAGGGTGGTaGTGGCCGCCTCTCAGGCTT +
Preference number: 4 (lower is better)
Translates to: FVAYLHVPPQASETPASPVSGGW*WPPLRL
Trigger: AAGCCTGAGAGGCGGCCAGCACCACCCTCCGCTCAC...TGGTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGCCACAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp CTCTCACCAGGGTTTGATCTGTCTGCGGTTCCCGCAGGAGTGATATTGTTTGGTATGACGCGTGCGAGGTaGCCCGTGTGGTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LSPGFDLSAVPAGVILFGMTRAR*PVWCRL
Trigger: CAGCCTGCACCACACGGGCCACCTCGCACGCGTCAT...ACCAAACAATATCACTCCTGCGGGAACCGCAGACAGATCAAACCCTGGTGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp GGAAAGGCTCCGGCACCTCAACCTCACTCTGGCTGCATTGGAAACTCTTCTGTCTGTGCGCCCCCAGCTTaGCCTCACAGTACATGGAGG +
Preference number: 4 (lower is better)
Translates to: GKAPAPQPHSGCIGNSSVCAPPA*PHSTWR
Trigger: CCTCCATGTACTGTGAGGCCAAGCTGGGGGCGCACA...GACAGAAGAGTTTCCAATGCAGCCAGAGTGAGGTTGAGGTGCCGGAGCCTTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp CTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCAAGAGGCGTGGGGGACAGGGTTCTaGGGCCAGCGATCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: LIFMCPLKLVRPQHHQEAWGTGF*GQRSGK
Trigger: CTTTCCAGATCGCTGGCCCCAGAACCCTGTCCCCCA...CGCCTCTTGGTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR CCA 90 bp TTTGTGGCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCAGCACCAGCGCGTTCTTaGGCGCCACCGACCACGACA +
Preference number: 4 (lower is better)
Translates to: FVAYLHVPPQASETPASPAPARS*APPTTT
Trigger: TGTCGTGGTCGGTGGCGCCCAAGAACGCGCTGGTGC...TGGTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGCCACAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp ACGGAAAGGCTCCGGCACCTCAACCTCACTCTGGCTGCATTGGAAACTCTTCTGTGGCCTTCTTCTTGGTaGGGCCTGTGCCCTCGAACG +
Preference number: 4 (lower is better)
Translates to: TERLRHLNLTLAALETLLWPSSW*GLCPRT
Trigger: CGTTCGAGGGCACAGGCCCCACCAAGAAGAAGGCCA...CAGAAGAGTTTCCAATGCAGCCAGAGTGAGGTTGAGGTGCCGGAGCCTTTCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp CGTGTAGGGTCACCCTTGACTGCCTCGACTACCTTCTCCTTTCACTACCCAGGGTCTTGGCCTTCTTCTTaGTGGGGCCTGTGCCCTCGA +
Preference number: 4 (lower is better)
Translates to: RVGSPLTASTTFSFHYPGSWPSS*WGLCPR
Trigger: TCGAGGGCACAGGCCCCACCAAGAAGAAGGCCAAGA...CCCTGGGTAGTGAAAGGAGAAGGTAGTCGAGGCAGTCAAGGGTGACCCTACACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp GCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCAAGAGGCGGGGGCTCGAACTCCTaGAAGAGCGTGTCGGGGAAA +
Preference number: 4 (lower is better)
Translates to: AYLHVPPQASETPASPRGGGSNS*KSVSGK
Trigger: TTTCCCCGACACGCTCTTCCAGGAGTTCGAGCCCCC...GCCTCTTGGTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp AAAGCCCCCATGTCCCATCTCCACTGTGAGCTGAAGGTCTCTGGTGTTGGAAGCACTTCAGCCAGGAGCTaGCCGTGCTCCCACGCATTC +
Preference number: 4 (lower is better)
Translates to: KAPMSHLHCELKVSGVGSTSARS*PCSHAF
Trigger: GAATGCGTGGGAGCACGGCCAGCTCCTGGCTGAAGT...GCTTCCAACACCAGAGACCTTCAGCTCACAGTGGAGATGGGACATGGGGGCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR TCA 90 bp AAGAGGCACGTTCTGAATTTGTGTTGTTGCTCGTCCAAACATTGCACACTCGCGCGTCACTCACGCCGCTaGGGAGAGGCCGGTTGTGCC +
Preference number: 4 (lower is better)
Translates to: KRHVLNLCCCSSKHCTLARHSRR*GEAGCA
Trigger: GGCACAACCGGCCTCTCCTCAGCGGCGTGAGTGACG...CGCGAGTGTGCAATGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR TCA 90 bp TTTGTGGCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCACGCTGCTGCGAAGCTTaGGGTTGCAAACCCGGGAGC +
Preference number: 4 (lower is better)
Translates to: FVAYLHVPPQASETPASPRCCEA*GCKPGS
Trigger: GCTCCCGGGTTTGCAACCTCAAGCTTCGCAGCAGCG...TGGTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGCCACAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR TCA 90 bp TTTGTGGCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCACCGTGCAGGACATGGTaGTCAGCTGCTCCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: FVAYLHVPPQASETPASPPCRTW*SAAPPA
Trigger: TGCTGGGGGAGCAGCTGATCACCATGTCCTGCACGG...TGGTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGCCACAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR TCA 90 bp ACGGAAAGGCTCCGGCACCTCAACCTCACTCTGGCTGCATTGGAAACTCTTCTGGTTGGAAGCCTGCTCTaGGGGTCACAGAATCCTGCC +
Preference number: 4 (lower is better)
Translates to: TERLRHLNLTLAALETLLVGSLL*GSQNPA
Trigger: GGCAGGATTCTGTGACCCTCAGAGCAGGCTTCCAAC...CAGAAGAGTTTCCAATGCAGCCAGAGTGAGGTTGAGGTGCCGGAGCCTTTCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR TCA 90 bp ACAGGAAGAGTCGGCGCTAACTCAACAGTGCATGTGCCCCTGGGTGTGGGGGACACTTGGAAAAGAGCCTaGCCCCGTATGAATACAGCG +
Preference number: 4 (lower is better)
Translates to: TGRVGANSTVHVPLGVGDTWKRA*PRMNTA
Trigger: CGCTGTATTCATACGGGGTCAGGCTCTTTTCCAAGT...GTCCCCCACACCCAGGGGCACATGCACTGTTGAGTTAGCGCCGACTCTTCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR TCA 90 bp GGAAAGGCTCCGGCACCTCAACCTCACTCTGGCTGCATTGGAAACTCTTCTGTCGGGAGCGCTCACTTCTaGCTGCTGCGAATGTCTGAG +
Preference number: 4 (lower is better)
Translates to: GKAPAPQPHSGCIGNSSVGSAHF*LLRMSE
Trigger: CTCAGACATTCGCAGCAGTCAGAAGTGAGCGCTCCC...GACAGAAGAGTTTCCAATGCAGCCAGAGTGAGGTTGAGGTGCCGGAGCCTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR TCA 90 bp GGAAAGGCTCCGGCACCTCAACCTCACTCTGGCTGCATTGGAAACTCTTCTGTCGCTTTCCGAGTCCCGTaGATCAGACCCTGCGTCTTC +
Preference number: 4 (lower is better)
Translates to: GKAPAPQPHSGCIGNSSVAFRVP*IRPCVF
Trigger: GAAGACGCAGGGTCTGATTCACGGGACTCGGAAAGC...GACAGAAGAGTTTCCAATGCAGCCAGAGTGAGGTTGAGGTGCCGGAGCCTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR TCA 90 bp GCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCAAGAGGCGGTGGGCAGATCACTTaGGGCCAGGAGTTCGAGACT +
Preference number: 4 (lower is better)
Translates to: AYLHVPPQASETPASPRGGGQIT*GQEFET
Trigger: AGTCTCGAACTCCTGGCCTCAAGTGATCTGCCCACC...GCCTCTTGGTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp TTTGTGGCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCATCTCCAGGTCCGCGCTaGCCACGACCCAGTTCATGC +
Preference number: 4 (lower is better)
Translates to: FVAYLHVPPQASETPASPSPGPR*PRPSSC
Trigger: GCATGAACTGGGTCGTGGGCAGCGCGGACCTGGAGA...TGGTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGCCACAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR GCA 90 bp CACGTCACAGGTCTTAACTCTGCCTCGCAGGGGTTTTGGAAACTGTTCCTTCACCCTGAGGCTCACTCCTaGCTGGTGTCGTGTCGGTGC +
Preference number: 4 (lower is better)
Translates to: HVTGLNSASQGFWKLFLHPEAHS*LVSCRC
Trigger: GCACCGACACGACACCAGGCAGGAGTGAGCCTCAGG...GTGAAGGAACAGTTTCCAAAACCCCTGCGAGGCAGAGTTAAGACCTGTGACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR GCA 90 bp TCGTCCAAACATTGCACACTCGCGTGTTTCTGGGACACCAAAGTAAAACGAATGGCCCTCCAGACCCTCTaGCGCTCCCCAGGACCGAGG +
Preference number: 4 (lower is better)
Translates to: SSKHCTLACFWDTKVKRMALQTL*RSPGPR
Trigger: CCTCGGTCCTGGGGAGCGGCAGAGGGTCTGGAGGGC...CATTCGTTTTACTTTGGTGTCCCAGAAACACGCGAGTGTGCAATGTTTGGACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp TTGTTGCTCGTCCAAACATTGCACACTCGCGTGTTTCTGGGACACCAAAGTAAAGCGAAGACCGGGGCATaGACCGGGCCCGTCTGCGAC +
Preference number: 4 (lower is better)
Translates to: LLLVQTLHTRVFLGHQSKAKTGA*TGPVCD
Trigger: GTCGCAGACGGGCCCGGTGCATGCCCCGGTCTTCGC...TTTACTTTGGTGTCCCAGAAACACGCGAGTGTGCAATGTTTGGACGAGCAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp CCAGCGATCTGGAAAGAGGCACGTTCTGAATTTGTGTTGTTGCTCGTCCAAACAGGGCCAGCTTCTTGCTaGGCCCCGAGCCCTCGAACG +
Preference number: 4 (lower is better)
Translates to: PAIWKEARSEFVLLLVQTGPASC*APSPRT
Trigger: CGTTCGAGGGCTCGGGGCGCAGCAAGAAGCTGGCCC...TGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTTTCCAGATCGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp ACTCCACAGGAAGAGTCGGCGCTAACTCAACAGTGCATGTGCCCCTGGGTGTGGCTCACTTCTGACTGCTaGGAATGTCTGAGCCACCCA +
Preference number: 4 (lower is better)
Translates to: TPQEESALTQQCMCPWVWLTSDC*ECLSHP
Trigger: TGGGTGGCTCAGACATTCGCAGCAGTCAGAAGTGAG...CCACACCCAGGGGCACATGCACTGTTGAGTTAGCGCCGACTCTTCCTGTGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp CTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCAAGAGGCGCACAGGCCCCCTCGCTaGAGAAACAGCGTGATTTGG +
Preference number: 4 (lower is better)
Translates to: LIFMCPLKLVRPQHHQEAHRPPR*RNSVIW
Trigger: CCAAATCACGCTGTTTCTGCAGCGAGGGGGCCTGTG...CGCCTCTTGGTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp CGATCTGGAAAGAGGCACGTTCTGAATTTGTGTTGTTGCTCGTCCAAACATTGCGTGGACAGCGGAGGCTaGCTGGCCGCGCAGCCGTTC +
Preference number: 4 (lower is better)
Translates to: RSGKRHVLNLCCCSSKHCVDSGG*LAAQPF
Trigger: GAACGGCTGCGCGGCCAGGCAGCCTCCGCTGTCCAC...GCAATGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTTTCCAGATCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp GCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCAAGAGGCAAACAGCCCTGCTCCTaGAGTGGCGAGGAACCCAGA +
Preference number: 4 (lower is better)
Translates to: AYLHVPPQASETPASPRGKQPCS*SGEEPR
Trigger: TCTGGGTTCCTCGCCACTGCAGGAGCAGGGCTGTTT...GCCTCTTGGTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp TCTTCATTTGTGGCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCACCATCGTGCGGACCTTaGGGAGCTCCCTGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: SSFVAYLHVPPQASETPAPSCGP*GAPWEC
Trigger: GCACTCCCAGGGAGCTCCCCAAGGTCCGCACGATGG...TGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGCCACAAATGAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381310.7
CDS-3UTR CCA 90 bp AAGAGGCACGTTCTGAATTTGTGTTGTTGCTCGTCCAAACATTGCACACTCGCGCTTGCAGAGCCGGGATaGGCCCCCACAGCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: KRHVLNLCCCSSKHCTLALAEPG*APTAPP
Trigger: CGGAGGAGCTGTGGGGGCCCATCCCGGCTCTGCAAG...CGCGAGTGTGCAATGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR CCA 90 bp CATTTGTGGCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCAGTGCATGTGCCCCTaGGTGTGGGGGACAGGGTTC +
Preference number: 4 (lower is better)
Translates to: HLWLIFMCPLKLVRPQHHQCMCP*VWGTGF
Trigger: GAACCCTGTCCCCCACACCCAGGGGCACATGCACTG...GTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGCCACAAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR CCA 90 bp TGTCGGTGCCTCCTTCCAAGGCTGCAGCTAAAACCCCTTTGCCTGAATGGAGCCCAACCCAGACCTCAGTaGCTCTTAGTATCGGCCACC +
Preference number: 4 (lower is better)
Translates to: CRCLLPRLQLKPLCLNGAQPRPQ*LLVSAT
Trigger: GGTGGCCGATACTAAGAGCCACTGAGGTCTGGGTTG...GGCTCCATTCAGGCAAAGGGGTTTTAGCTGCAGCCTTGGAAGGAGGCACCGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR CCA 90 bp GCTTCCCAGAAACAGCCTGAGAAGGAAGCTCCTCTGTCTCCACCGCATCTCTGGCAACCCAGACCTCAGTaGCTCTTAGTATCGGCCACC +
Preference number: 4 (lower is better)
Translates to: ASQKQPEKEAPLSPPHLWQPRPQ*LLVSAT
Trigger: GGTGGCCGATACTAAGAGCCACTGAGGTCTGGGTTG...CCAGAGATGCGGTGGAGACAGAGGAGCTTCCTTCTCAGGCTGTTTCTGGGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp CATTTGTGGCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACGCGTGGCCGGGCATCTaGATGTCGAACAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: HLWLIFMCPLKLVRPQHHAWPGI*MSNSSC
Trigger: GCAGGAGCTGTTCGACATCCAGATGCCCGGCCACGC...GTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGCCACAAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp CTCTCACCAGGGTTTGATCTGTCTGCGGTTCCCGCAGGAGTGATATTGTTTGGTGAATTCCTGCGGCATTaGCGTCCTCCTGGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: LSPGFDLSAVPAGVILFGEFLRH*RPPGPA
Trigger: GGCAGGGCCAGGAGGACGCCAATGCCGCAGGAATTC...ACCAAACAATATCACTCCTGCGGGAACCGCAGACAGATCAAACCCTGGTGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp TCGTCCAAACATTGCACACTCGCGTGTTTCTGGGACACCAAAGTAAAACGAATGAGGTCTGCACTGCGCTaGGGCCACGCACGGGGACCG +
Preference number: 4 (lower is better)
Translates to: SSKHCTLACFWDTKVKRMRSALR*GHARGP
Trigger: CGGTCCCCGTGCGTGGCCCCAGCGCAGTGCAGACCT...CATTCGTTTTACTTTGGTGTCCCAGAAACACGCGAGTGTGCAATGTTTGGACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp AAAGCCCCCATGTCCCATCTCCACTGTGAGCTGAAGGTCTCTGGTGTTGGAAGCGATTTGAGGCCTGGGTaGGAGACTTCAGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: KAPMSHLHCELKVSGVGSDLRPG*ETSARS
Trigger: GCTCCTGGCTGAAGTCTCCCACCCAGGCCTCAAATC...GCTTCCAACACCAGAGACCTTCAGCTCACAGTGGAGATGGGACATGGGGGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp CTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCAAGAGGCGTGGAGGTATGTGGGATaGCGGCTCCCTGACATGGAC +
Preference number: 4 (lower is better)
Translates to: LIFMCPLKLVRPQHHQEAWRYVG*RLPDMD
Trigger: GTCCATGTCAGGGAGCCGCCATCCCACATACCTCCA...CGCCTCTTGGTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp ACTCCACAGGAAGAGTCGGCGCTAACTCAACAGTGCATGTGCCCCTGGGTGTGGCAGCGTTCCTTCTGGTaGGAGGTCAGAACATGTGGA +
Preference number: 4 (lower is better)
Translates to: TPQEESALTQQCMCPWVWQRSFW*EVRTCG
Trigger: TCCACATGTTCTGACCTCCCACCAGAAGGAACGCTG...CCACACCCAGGGGCACATGCACTGTTGAGTTAGCGCCGACTCTTCCTGTGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR TCA 90 bp CTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCAAGAGGCGCATCCTCCGTGTTTGTaGTGCCAGGACTCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: LIFMCPLKLVRPQHHQEAHPPCL*CQDSGA
Trigger: AGCACCTGAGTCCTGGCATCACAAACACGGAGGATG...CGCCTCTTGGTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR TCA 90 bp TGCAGAAACAGCGTGATTTGGAGCCCACTGGGACAAAGCATTATATGCTTCTCTACTGCACGAAGGACCTaGGTGCCAGCTCCGCCGCGC +
Preference number: 4 (lower is better)
Translates to: CRNSVIWSPLGQSIICFSTARRT*VPAPPR
Trigger: GCGCGGCGGAGCTGGCACTCAGGTCCTTCGTGCAGT...AGAGAAGCATATAATGCTTTGTCCCAGTGGGCTCCAAATCACGCTGTTTCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR TCA 90 bp CGTGTAGGGTCACCCTTGACTGCCTCGACTACCTTCTCCTTTCACTACCCAGGGTTCCCAGAAACAGCCTaGGAAGGAAGCTCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: RVGSPLTASTTFSFHYPGFPETA*EGSSSV
Trigger: GACAGAGGAGCTTCCTTCTCAGGCTGTTTCTGGGAA...CCCTGGGTAGTGAAAGGAGAAGGTAGTCGAGGCAGTCAAGGGTGACCCTACACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp CATTTGTGGCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCTCTGGGGACACTGTTaGCTGGGACTGGGCTCCACA +
Preference number: 4 (lower is better)
Translates to: HLWLIFMCPLKLVRPQHHLWGHC*LGLGST
Trigger: TGTGGAGCCCAGTCCCAGGCAACAGTGTCCCCAGAG...GTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGCCACAAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381310.7
CDS-3UTR GCA 90 bp TCGTCCAAACATTGCACACTCGCGTGTTTCTGGGACACCAAAGTAAAACGAATGGGAGCTCCCTGGGAGTaGCCCAGACCCAACCCAGCC +
Preference number: 4 (lower is better)
Translates to: SSKHCTLACFWDTKVKRMGAPWE*PRPNPA
Trigger: GGCTGGGTTGGGTCTGGGGCACTCCCAGGGAGCTCC...CATTCGTTTTACTTTGGTGTCCCAGAAACACGCGAGTGTGCAATGTTTGGACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381310.7
CDS-3UTR GCA 90 bp CACGTCACAGGTCTTAACTCTGCCTCGCAGGGGTTTTGGAAACTGTTCCTTCACTCAGTCTTCCCATCGTaGGGACCTTGGGGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: HVTGLNSASQGFWKLFLHSVFPS*GPWGAP
Trigger: GGGAGCTCCCCAAGGTCCGCACGATGGGAAGACTGA...GTGAAGGAACAGTTTCCAAAACCCCTGCGAGGCAGAGTTAAGACCTGTGACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381310.7
CDS-3UTR GCA 90 bp CCAGCGATCTGGAAAGAGGCACGTTCTGAATTTGTGTTGTTGCTCGTCCAAACAAGGTGGCCCGTGTGGTaGAGGCTGCCCACCACGATG +
Preference number: 4 (lower is better)
Translates to: PAIWKEARSEFVLLLVQTRWPVW*RLPTTM
Trigger: CATCGTGGTGGGCAGCCTGCACCACACGGGCCACCT...TGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTTTCCAGATCGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR GCA 90 bp ACTCCACAGGAAGAGTCGGCGCTAACTCAACAGTGCATGTGCCCCTGGGTGTGGTGCTCGTCCAAACATTaGACACTCGCGTGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: TPQEESALTQQCMCPWVWCSSKH*TLACFW
Trigger: CCAGAAACACGCGAGTGTGCAATGTTTGGACGAGCA...CCACACCCAGGGGCACATGCACTGTTGAGTTAGCGCCGACTCTTCCTGTGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR GCA 90 bp CTGCAGAAACAGCGTGATTTGGAGCCCACTGGGACAAAGCATTATATGCTTCTCCACGAAGGACCTGAGTaGCAGCTCCGCCGCGCGCAT +
Preference number: 4 (lower is better)
Translates to: LQKQRDLEPTGTKHYMLLHEGPE*QLRRAH
Trigger: ATGCGCGCGGCGGAGCTGGCACTCAGGTCCTTCGTG...GAGAAGCATATAATGCTTTGTCCCAGTGGGCTCCAAATCACGCTGTTTCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp CACGTCACAGGTCTTAACTCTGCCTCGCAGGGGTTTTGGAAACTGTTCCTTCACCAGGCGTTGGGGAACTaGACGAAGGACCTGAGTGCC +
Preference number: 4 (lower is better)
Translates to: HVTGLNSASQGFWKLFLHQALGN*TKDLSA
Trigger: GGCACTCAGGTCCTTCGTGCAGTTCCCCAACGCCTG...GTGAAGGAACAGTTTCCAAAACCCCTGCGAGGCAGAGTTAAGACCTGTGACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp CGTGTAGGGTCACCCTTGACTGCCTCGACTACCTTCTCCTTTCACTACCCAGGGCTGGGATATGGAGTCTaGGAATTCCTGCGGCATTGG +
Preference number: 4 (lower is better)
Translates to: RVGSPLTASTTFSFHYPGLGYGV*EFLRHW
Trigger: CCAATGCCGCAGGAATTCGCAGACTCCATATCCCAG...CCCTGGGTAGTGAAAGGAGAAGGTAGTCGAGGCAGTCAAGGGTGACCCTACACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp CTCTCACCAGGGTTTGATCTGTCTGCGGTTCCCGCAGGAGTGATATTGTTTGGTCCCTGGTCACTGAGGTaGTCGCCGCTGATGCACTTG +
Preference number: 4 (lower is better)
Translates to: LSPGFDLSAVPAGVILFGPWSLR*SPLMHL
Trigger: CAAGTGCATCAGCGGCGAGCACCTCAGTGACCAGGG...ACCAAACAATATCACTCCTGCGGGAACCGCAGACAGATCAAACCCTGGTGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp TCTTCATTTGTGGCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCAGACATGGTGATCAGCTaGTCCCCCAGCAGGACGCCG +
Preference number: 4 (lower is better)
Translates to: SSFVAYLHVPPQASETPADMVIS*SPSRTP
Trigger: CGGCGTCCTGCTGGGGGAGCAGCTGATCACCATGTC...TGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGCCACAAATGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp TCACCAGGGTTTGATCTGTCTGCGGTTCCCGCAGGAGTGATATTGTTTGGTGTGCAGTTGGGAGCAGCCTaGGTGTGGCGTGATCTGGTG +
Preference number: 4 (lower is better)
Translates to: SPGFDLSAVPAGVILFGVQLGAA*VWRDLV
Trigger: CACCAGATCACGCCACACGCAGGCTGCTCCCAACTG...CACACCAAACAATATCACTCCTGCGGGAACCGCAGACAGATCAAACCCTGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp CTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCAAGAGGCGTGCAGCAACTCCCTGTaGACAAGGCATCAGGAACCC +
Preference number: 4 (lower is better)
Translates to: LIFMCPLKLVRPQHHQEACSNSL*TRHQEP
Trigger: GGGTTCCTGATGCCTTGTGCACAGGGAGTTGCTGCA...CGCCTCTTGGTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp AAGAGGCACGTTCTGAATTTGTGTTGTTGCTCGTCCAAACATTGCACACTCGCGCCTTGGGGAGCTCCCTaGGAGTGCCCCAGACCCAAC +
Preference number: 4 (lower is better)
Translates to: KRHVLNLCCCSSKHCTLAPWGAP*ECPRPN
Trigger: GTTGGGTCTGGGGCACTCCCAGGGAGCTCCCCAAGG...CGCGAGTGTGCAATGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381310.7
CDS-3UTR CCA 90 bp TGCAGAAACAGCGTGATTTGGAGCCCACTGGGACAAAGCATTATATGCTTCTCTACGGGCTCCACGAAGTaGGACAGGAGCGCGCCCTGC +
Preference number: 4 (lower is better)
Translates to: CRNSVIWSPLGQSIICFSTGSTK*DRSAPC
Trigger: GCAGGGCGCGCTCCTGTCCCACTTCGTGGAGCCCGT...AGAGAAGCATATAATGCTTTGTCCCAGTGGGCTCCAAATCACGCTGTTTCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp CTGCAGAAACAGCGTGATTTGGAGCCCACTGGGACAAAGCATTATATGCTTCTCGCGTGTCTCCAGGGCTaGGTGTCCGTGTGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: LQKQRDLEPTGTKHYMLLACLQG*VSVCSA
Trigger: GGCTGAGCACACGGACACCCAGCCCTGGAGACACGC...GAGAAGCATATAATGCTTTGTCCCAGTGGGCTCCAAATCACGCTGTTTCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp ACAGGAAGAGTCGGCGCTAACTCAACAGTGCATGTGCCCCTGGGTGTGGGGGACGCCTCGCAGGGGTTTTaGAAACTGTTCCTTCACTTT +
Preference number: 4 (lower is better)
Translates to: TGRVGANSTVHVPLGVGDASQGF*KLFLHF
Trigger: AAAGTGAAGGAACAGTTTCCAAAACCCCTGCGAGGC...GTCCCCCACACCCAGGGGCACATGCACTGTTGAGTTAGCGCCGACTCTTCCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR CCA 90 bp CCAGCGATCTGGAAAGAGGCACGTTCTGAATTTGTGTTGTTGCTCGTCCAAACAGCGCCTGGCAGGCGTTaGGGAACTGCACGAAGGACC +
Preference number: 4 (lower is better)
Translates to: PAIWKEARSEFVLLLVQTAPGRR*GTARRT
Trigger: GGTCCTTCGTGCAGTTCCCCAACGCCTGCCAGGCGC...TGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTTTCCAGATCGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp TGCAGAAACAGCGTGATTTGGAGCCCACTGGGACAAAGCATTATATGCTTCTCTCCCCGGACTCGATCTTaGTGCGCAGGTGCCCGCGGA +
Preference number: 4 (lower is better)
Translates to: CRNSVIWSPLGQSIICFSPRTRS*CAGARG
Trigger: TCCGCGGGCACCTGCGCACCAAGATCGAGTCCGGGG...AGAGAAGCATATAATGCTTTGTCCCAGTGGGCTCCAAATCACGCTGTTTCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp TCTTCATTTGTGGCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCAATGCTGGCCACTGGGTaGCCGAGCGCTTTCCGAGTC +
Preference number: 4 (lower is better)
Translates to: SSFVAYLHVPPQASETPAMLATG*PSAFRV
Trigger: GACTCGGAAAGCGCTCGGCCACCCAGTGGCCAGCAT...TGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGCCACAAATGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp TCACCAGGGTTTGATCTGTCTGCGGTTCCCGCAGGAGTGATATTGTTTGGTGTGCCTCCTTTCCTTACGTaGGGTCCCCTCTGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: SPGFDLSAVPAGVILFGVPPFLT*GPLCSP
Trigger: TGGGCTGCAGAGGGGACCCCACGTAAGGAAAGGAGG...CACACCAAACAATATCACTCCTGCGGGAACCGCAGACAGATCAAACCCTGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp CACGTCACAGGTCTTAACTCTGCCTCGCAGGGGTTTTGGAAACTGTTCCTTCACCTGAAGCAAGGGGCTTaGCGGTGTCAGGTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: HVTGLNSASQGFWKLFLHLKQGA*RCQVVG
Trigger: TCCCACCACCTGACACCGCCAAGCCCCTTGCTTCAG...GTGAAGGAACAGTTTCCAAAACCCCTGCGAGGCAGAGTTAAGACCTGTGACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR CAA 72 bp GGGGGCCACGGCAGCAGAACAAAGGAGCCAGGAGTTTaGGGACAGGGACTAACAAGACAGCAAGAAAGGGAA +
Preference number: 4 (lower is better)
Translates to: GGHGSRTKEPGV*GQGLTRQQERE
Trigger: TTCCCTTTCTTGCTGTCTTGTTAGTCCCTGTCCCAAAACTCCTGGCTCCTTTGTTCTGCTGCCGTGGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR TCA 90 bp TTTGTGGCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCAGAATATCGATCGCTCTaGGTCCTCGCGCCGCTTGCT +
Preference number: 4 (lower is better)
Translates to: FVAYLHVPPQASETPASPEYRSL*VLAPLA
Trigger: AGCAAGCGGCGCGAGGACTCAGAGCGATCGATATTC...TGGTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGCCACAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR TCA 90 bp TTTGTGGCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCACTTGGCTCTCAGGGATaGTGCTGTGGGCTAAAGCCC +
Preference number: 4 (lower is better)
Translates to: FVAYLHVPPQASETPASPLGSQG*CCGLKP
Trigger: GGGCTTTAGCCCACAGCATCATCCCTGAGAGCCAAG...TGGTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGCCACAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR TCA 90 bp CTCTCACCAGGGTTTGATCTGTCTGCGGTTCCCGCAGGAGTGATATTGTTTGGTACTGCTGCGAATGTCTaGGCCACCCATCACCTCTCG +
Preference number: 4 (lower is better)
Translates to: LSPGFDLSAVPAGVILFGTAANV*ATHHLS
Trigger: CGAGAGGTGATGGGTGGCTCAGACATTCGCAGCAGT...ACCAAACAATATCACTCCTGCGGGAACCGCAGACAGATCAAACCCTGGTGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR TCA 90 bp GGAAAGGCTCCGGCACCTCAACCTCACTCTGGCTGCATTGGAAACTCTTCTGTCAATCTAGGGCCTGTGTaGAAAGAGGCACTGGGACCA +
Preference number: 4 (lower is better)
Translates to: GKAPAPQPHSGCIGNSSVNLGPV*KEALGP
Trigger: TGGTCCCAGTGCCTCTTTTCACACAGGCCCTAGATT...GACAGAAGAGTTTCCAATGCAGCCAGAGTGAGGTTGAGGTGCCGGAGCCTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp TTGTTGCTCGTCCAAACATTGCACACTCGCGTGTTTCTGGGACACCAAAGTAAATCCGTGTGCTCAGCCTaGCATACAGCCGCGCCCACC +
Preference number: 4 (lower is better)
Translates to: LLLVQTLHTRVFLGHQSKSVCSA*HTAAPT
Trigger: GGTGGGCGCGGCTGTATGGCAGGCTGAGCACACGGA...TTTACTTTGGTGTCCCAGAAACACGCGAGTGTGCAATGTTTGGACGAGCAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR GCA 90 bp GCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCAAGAGGCGTCAGTAGAAACTGCTaGTGCTCCGGTGGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: AYLHVPPQASETPASPRGVSRNC*CSGGFL
Trigger: GAGGAAACCACCGGAGCAGCAGCAGTTTCTACTGAC...GCCTCTTGGTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR GCA 90 bp ACTCCACAGGAAGAGTCGGCGCTAACTCAACAGTGCATGTGCCCCTGGGTGTGGTGGCTTATCTTCATGTaGCCCCTCAAGCTAGTGAGA +
Preference number: 4 (lower is better)
Translates to: TPQEESALTQQCMCPWVWWLIFM*PLKLVR
Trigger: TCTCACTAGCTTGAGGGGGCACATGAAGATAAGCCA...CCACACCCAGGGGCACATGCACTGTTGAGTTAGCGCCGACTCTTCCTGTGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR GCA 90 bp TTGTTGCTCGTCCAAACATTGCACACTCGCGTGTTTCTGGGACACCAAAGTAAAAGCCCTCGAACGTCCTaGCGTCCACGCTCACGGCCA +
Preference number: 4 (lower is better)
Translates to: LLLVQTLHTRVFLGHQSKSPRTS*RPRSRP
Trigger: TGGCCGTGAGCGTGGACGGCAGGACGTTCGAGGGCT...TTTACTTTGGTGTCCCAGAAACACGCGAGTGTGCAATGTTTGGACGAGCAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp TTGTTGCTCGTCCAAACATTGCACACTCGCGTGTTTCTGGGACACCAAAGTAAAATGTCGAACAGCTCCTaGAGTGCGGCCTGCGCGGCC +
Preference number: 4 (lower is better)
Translates to: LLLVQTLHTRVFLGHQSKMSNSS*SAACAA
Trigger: GGCCGCGCAGGCCGCACTGCAGGAGCTGTTCGACAT...TTTACTTTGGTGTCCCAGAAACACGCGAGTGTGCAATGTTTGGACGAGCAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp CACGTCACAGGTCTTAACTCTGCCTCGCAGGGGTTTTGGAAACTGTTCCTTCACGAGTCTGCGAATTCCTaGGGCATTGGCGTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: HVTGLNSASQGFWKLFLHESANS*GIGVLL
Trigger: CAGGAGGACGCCAATGCCGCAGGAATTCGCAGACTC...GTGAAGGAACAGTTTCCAAAACCCCTGCGAGGCAGAGTTAAGACCTGTGACGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp CTTGACTATGTACAGCACAATGTTATTCTTGCACTTTCTGGGGTGGTCAGCTGGGCCACGACCTGCGCCTaGCGAGCATCCAGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: LDYVQHNVILALSGVVSWATTCA*RASRPL
Trigger: CAAAGGCCTGGATGCTCGGCAGGCGCAGGTCGTGGC...CCAGCTGACCACCCCAGAAAGTGCAAGAATAACATTGTGCTGTACATAGTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp CTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCAAGAGGCGAGGTGTTTGCTGCTGTaGAGGTCTGTGGTGATCTCG +
Preference number: 4 (lower is better)
Translates to: LIFMCPLKLVRPQHHQEARCLLL*RSVVIS
Trigger: CGAGATCACCACAGACCTGCACAGCAGCAAACACCT...CGCCTCTTGGTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp AAGAGGCACGTTCTGAATTTGTGTTGTTGCTCGTCCAAACATTGCACACTCGCGCGGACTCGATCTTGGTaGGCAGGTGCCCGCGGAACT +
Preference number: 4 (lower is better)
Translates to: KRHVLNLCCCSSKHCTLARTRSW*AGARGT
Trigger: AGTTCCGCGGGCACCTGCGCACCAAGATCGAGTCCG...CGCGAGTGTGCAATGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp TTCTGGGACACCAAAGTAAAACGAATGCAGGGAACCGGCCGACCCGCCACGTCGTGTGACAGTGAAATCTaGTTACAACACAGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: FWDTKVKRMQGTGRPATSCDSEI*LQHRPP
Trigger: AGGGGGCCTGTGTTGTAAGCAGATTTCACTGTCACA...CGACGTGGCGGGTCGGCCGGTTCCCTGCATTCGTTTTACTTTGGTGTCCCAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp CGATCTGGAAAGAGGCACGTTCTGAATTTGTGTTGTTGCTCGTCCAAACATTGCGGGGACACTGTTGCCTaGGACTGGGCTCCACAGGCC +
Preference number: 4 (lower is better)
Translates to: RSGKRHVLNLCCCSSKHCGDTVA*DWAPQA
Trigger: GGCCTGTGGAGCCCAGTCCCAGGCAACAGTGTCCCC...GCAATGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTTTCCAGATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381310.7
CDS-3UTR CCA 90 bp TTGTTGCTCGTCCAAACATTGCACACTCGCGTGTTTCTGGGACACCAAAGTAAAGGAGCCCAGGGAGCCTaGTCCTCTCTGTCCGTCTGC +
Preference number: 4 (lower is better)
Translates to: LLLVQTLHTRVFLGHQSKGAQGA*SSLSVC
Trigger: GCAGACGGACAGAGAGGACCAGGCTCCCTGGGCTCC...TTTACTTTGGTGTCCCAGAAACACGCGAGTGTGCAATGTTTGGACGAGCAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381310.7
CDS-3UTR CCA 90 bp AAGAGGCACGTTCTGAATTTGTGTTGTTGCTCGTCCAAACATTGCACACTCGCGACACCCTCCATGCGGTaGCTCATGACGCGTGCGAGG +
Preference number: 4 (lower is better)
Translates to: KRHVLNLCCCSSKHCTLATPSMR*LMTRAR
Trigger: CCTCGCACGCGTCATGAGCCACCGCATGGAGGGTGT...CGCGAGTGTGCAATGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR CCA 90 bp CGATCTGGAAAGAGGCACGTTCTGAATTTGTGTTGTTGCTCGTCCAAACATTGCGCGTGTCTCCAGGGCTaGGTGTCCGTGTGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: RSGKRHVLNLCCCSSKHCACLQG*VSVCSA
Trigger: GGCTGAGCACACGGACACCCAGCCCTGGAGACACGC...GCAATGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTTTCCAGATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR CCA 90 bp ACAGGAAGAGTCGGCGCTAACTCAACAGTGCATGTGCCCCTGGGTGTGGGGGACACACTCGCGTGTTTCTaGGACACCAAAGTAAAACGA +
Preference number: 4 (lower is better)
Translates to: TGRVGANSTVHVPLGVGDTLACF*DTKVKR
Trigger: TCGTTTTACTTTGGTGTCCCAGAAACACGCGAGTGT...GTCCCCCACACCCAGGGGCACATGCACTGTTGAGTTAGCGCCGACTCTTCCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR CCA 90 bp CACGTCACAGGTCTTAACTCTGCCTCGCAGGGGTTTTGGAAACTGTTCCTTCACTGCAGTTTGCACAAGTaGCCCCCATTCCCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: HVTGLNSASQGFWKLFLHCSLHK*PPFPSS
Trigger: GGAGGAGGGGAATGGGGGCCACTTGTGCAAACTGCA...GTGAAGGAACAGTTTCCAAAACCCCTGCGAGGCAGAGTTAAGACCTGTGACGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp TCGTCCAAACATTGCACACTCGCGTGTTTCTGGGACACCAAAGTAAAACGAATGCCTGCCAGCGCTTTATaGCGGGCGTGCATGGGCGTG +
Preference number: 4 (lower is better)
Translates to: SSKHCTLACFWDTKVKRMPASAL*RACMGV
Trigger: CACGCCCATGCACGCCCGCCATAAAGCGCTGGCAGG...CATTCGTTTTACTTTGGTGTCCCAGAAACACGCGAGTGTGCAATGTTTGGACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp TTCTGGGACACCAAAGTAAAACGAATGCAGGGAACCGGCCGACCCGCCACGTCGTATTCTTGCACTTTCTaGGGTGGTCAGCTGGGATTC +
Preference number: 4 (lower is better)
Translates to: FWDTKVKRMQGTGRPATSYSCTF*GGQLGF
Trigger: GAATCCCAGCTGACCACCCCAGAAAGTGCAAGAATA...CGACGTGGCGGGTCGGCCGGTTCCCTGCATTCGTTTTACTTTGGTGTCCCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp CTTGACTATGTACAGCACAATGTTATTCTTGCACTTTCTGGGGTGGTCAGCTGGTCAGGCCCTGCCAGTTaGGAGCAGCCTGCGTGTGGC +
Preference number: 4 (lower is better)
Translates to: LDYVQHNVILALSGVVSWSGPAS*EQPACG
Trigger: GCCACACGCAGGCTGCTCCCAACTGGCAGGGCCTGA...CCAGCTGACCACCCCAGAAAGTGCAAGAATAACATTGTGCTGTACATAGTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp CATTTGTGGCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACTGGAATCCTAGGACCTaGCCCTTCCTGGCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: HLWLIFMCPLKLVRPQHHWNPRT*PFLAGS
Trigger: TGACCCAGCCAGGAAGGGCCAGGTCCTAGGATTCCA...GTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGCCACAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp TCACCAGGGTTTGATCTGTCTGCGGTTCCCGCAGGAGTGATATTGTTTGGTGTGTCTCCACCGCATCTCTaGTTGGTCCCTGTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: SPGFDLSAVPAGVILFGVSPPHL*LVPVAS
Trigger: AGAGGCCACAGGGACCAACCAGAGATGCGGTGGAGA...CACACCAAACAATATCACTCCTGCGGGAACCGCAGACAGATCAAACCCTGGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp TTGTTGCTCGTCCAAACATTGCACACTCGCGTGTTTCTGGGACACCAAAGTAAAAGAGTGAGCGGAGGGTaGTGCTGGCCGCCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: LLLVQTLHTRVFLGHQSKRVSGG*CWPPLR
Trigger: CCTGAGAGGCGGCCAGCACCACCCTCCGCTCACTCT...TTTACTTTGGTGTCCCAGAAACACGCGAGTGTGCAATGTTTGGACGAGCAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp GCGTGCCTCCTGCGTGTAGGGTCACCCTTGACTGCCTCGACTACCTTCTCCTTTTCATCCCTCCAACCTTaGCTTAGGATGATGAGTTGG +
Preference number: 4 (lower is better)
Translates to: ACLLRVGSPLTASTTFSFSSLQP*LRMMSW
Trigger: CCAACTCATCATCCTAAGCCAAGGTTGGAGGGATGA...AAAGGAGAAGGTAGTCGAGGCAGTCAAGGGTGACCCTACACGCAGGAGGCACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR CAA 72 bp GGAAGCCCACACCCCAGAGGTGGACACCACCATGCTTaGCCGTCTGCCATCACTGTCATGAATTTCAGAGAT +
Preference number: 4 (lower is better)
Translates to: GSPHPRGGHHHA*PSAITVMNFRD
Trigger: ATCTCTGAAATTCATGACAGTGATGGCAGACGGCAAAGCATGGTGGTGTCCACCTCTGGGGTGTGGGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR TCA 90 bp TTGTTGCTCGTCCAAACATTGCACACTCGCGTGTTTCTGGGACACCAAAGTAAATCTGCGGCCTGGTCCTaGGGACCTGTCAGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: LLLVQTLHTRVFLGHQSKSAAWS*GPVSLP
Trigger: GGGAAGACTGACAGGTCCTCAGGACCAGGCCGCAGA...TTTACTTTGGTGTCCCAGAAACACGCGAGTGTGCAATGTTTGGACGAGCAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381310.7
CDS-3UTR TCA 90 bp AAGAGGCACGTTCTGAATTTGTGTTGTTGCTCGTCCAAACATTGCACACTCGCGCCCAGGCCAGCCTTCTaGAAGGCCTTGAACAGCTGC +
Preference number: 4 (lower is better)
Translates to: KRHVLNLCCCSSKHCTLAPRPAF*KALNSC
Trigger: GCAGCTGTTCAAGGCCTTTCAGAAGGCTGGCCTGGG...CGCGAGTGTGCAATGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR TCA 90 bp TCACCAGGGTTTGATCTGTCTGCGGTTCCCGCAGGAGTGATATTGTTTGGTGTGCGCGGAACTTCTGTGTaGCCAGCTGGGATATGGAGT +
Preference number: 4 (lower is better)
Translates to: SPGFDLSAVPAGVILFGVRGTSV*PAGIWS
Trigger: ACTCCATATCCCAGCTGGTCACACAGAAGTTCCGCG...CACACCAAACAATATCACTCCTGCGGGAACCGCAGACAGATCAAACCCTGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR TCA 90 bp CTGGGCATTGATATCCTCTGTATTTACTGTTTATGGCTCTCCAGACGTGATAAAGGGCGTGCATGGGCGTaGGGTCCGTCGTCACCTCGC +
Preference number: 4 (lower is better)
Translates to: LGIDILCIYCLWLSRRDKGRAWA*GPSSPR
Trigger: GCGAGGTGACGACGGACCTCACGCCCATGCACGCCC...TTTATCACGTCTGGAGAGCCATAAACAGTAAATACAGAGGATATCAATGCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR TCA 90 bp CCAGCGATCTGGAAAGAGGCACGTTCTGAATTTGTGTTGTTGCTCGTCCAAACAGCCCGCGGAACTTCCTaGCGAGGTGTTTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: PAIWKEARSEFVLLLVQTARGTS*RGVCCC
Trigger: ACAGCAGCAAACACCTCGTCAGGAAGTTCCGCGGGC...TGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTTTCCAGATCGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR TCA 90 bp TTTGTGGCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCAAGGGCAGACATGGCCTaGAAGTGGTGCTGGGATGTT +
Preference number: 4 (lower is better)
Translates to: FVAYLHVPPQASETPASPRADMA*KWCWDV
Trigger: AACATCCCAGCACCACTTTCAGGCCATGTCTGCCCT...TGGTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGCCACAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR TCA 90 bp CGATCTGGAAAGAGGCACGTTCTGAATTTGTGTTGTTGCTCGTCCAAACATTGCCCCCCAGCCCCAGCATaGACCTGTTGTGTGGATCCC +
Preference number: 4 (lower is better)
Translates to: RSGKRHVLNLCCCSSKHCPPAPA*TCCVDP
Trigger: GGGATCCACACAACAGGTTCATGCTGGGGCTGGGGG...GCAATGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTTTCCAGATCG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp AAAGCCCCCATGTCCCATCTCCACTGTGAGCTGAAGGTCTCTGGTGTTGGAAGCTGCTCGTCCAAACATTaGACACTCGCGTGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: KAPMSHLHCELKVSGVGSCSSKH*TLACFW
Trigger: CCAGAAACACGCGAGTGTGCAATGTTTGGACGAGCA...GCTTCCAACACCAGAGACCTTCAGCTCACAGTGGAGATGGGACATGGGGGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp AAAGCCCCCATGTCCCATCTCCACTGTGAGCTGAAGGTCTCTGGTGTTGGAAGCCAGGGAGGCTACTTTTaGGCCTCTGCTAGTTGTTTG +
Preference number: 4 (lower is better)
Translates to: KAPMSHLHCELKVSGVGSQGGYF*ASASCL
Trigger: CAAACAACTAGCAGAGGCGCAAAAGTAGCCTCCCTG...GCTTCCAACACCAGAGACCTTCAGCTCACAGTGGAGATGGGACATGGGGGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp TCACCAGGGTTTGATCTGTCTGCGGTTCCCGCAGGAGTGATATTGTTTGGTGTGTCCAACCGCGAGCTCTaGAAAAACTGCAGGCGAGGA +
Preference number: 4 (lower is better)
Translates to: SPGFDLSAVPAGVILFGVSNREL*KNCRRG
Trigger: TCCTCGCCTGCAGTTTTTGCAGAGCTCGCGGTTGGA...CACACCAAACAATATCACTCCTGCGGGAACCGCAGACAGATCAAACCCTGGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp AAGAGGCACGTTCTGAATTTGTGTTGTTGCTCGTCCAAACATTGCACACTCGCGGTCCCTGCTAAGAGCTaGCTGGGGGTGCTACTGCCT +
Preference number: 4 (lower is better)
Translates to: KRHVLNLCCCSSKHCTLAVPAKS*LGVLLP
Trigger: AGGCAGTAGCACCCCCAGGCAGCTCTTAGCAGGGAC...CGCGAGTGTGCAATGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp AAGAGGCACGTTCTGAATTTGTGTTGTTGCTCGTCCAAACATTGCACACTCGCGTGTGGCCTCTGCTCCTaGCTCCTCACTTCCCCACCA +
Preference number: 4 (lower is better)
Translates to: KRHVLNLCCCSSKHCTLACGLCS*LLTSPP
Trigger: TGGTGGGGAAGTGAGGAGGCAGGAGCAGAGGCCACA...CGCGAGTGTGCAATGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp TTGTTGCTCGTCCAAACATTGCACACTCGCGTGTTTCTGGGACACCAAAGTAAAGCCACGACCTCCGCGTaGCAGTCATTCACCACCAGC +
Preference number: 4 (lower is better)
Translates to: LLLVQTLHTRVFLGHQSKATTSA*QSFTTS
Trigger: GCTGGTGGTGAATGACTGCCACGCGGAGGTCGTGGC...TTTACTTTGGTGTCCCAGAAACACGCGAGTGTGCAATGTTTGGACGAGCAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp ACGGAAAGGCTCCGGCACCTCAACCTCACTCTGGCTGCATTGGAAACTCTTCTGATGAATACAGCGCCTTaGCTCTCAGGGATGATGCTG +
Preference number: 4 (lower is better)
Translates to: TERLRHLNLTLAALETLLMNTAP*LSGMML
Trigger: CAGCATCATCCCTGAGAGCCAAGGCGCTGTATTCAT...CAGAAGAGTTTCCAATGCAGCCAGAGTGAGGTTGAGGTGCCGGAGCCTTTCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp ACGGAAAGGCTCCGGCACCTCAACCTCACTCTGGCTGCATTGGAAACTCTTCTGAGAAACAGCGTGATTTaGAGCCCACTGGGACAAAGC +
Preference number: 4 (lower is better)
Translates to: TERLRHLNLTLAALETLLRNSVI*SPLGQS
Trigger: GCTTTGTCCCAGTGGGCTCCAAATCACGCTGTTTCT...CAGAAGAGTTTCCAATGCAGCCAGAGTGAGGTTGAGGTGCCGGAGCCTTTCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR CAA 72 bp TGGGGCCAGCGATCTGGAAAGAGGCACGTTCTGAATTaGTGTTGTTGCTCGTCCAAACATTGCACACTCGCG +
Preference number: 4 (lower is better)
Translates to: WGQRSGKRHVLN*CCCSSKHCTLA
Trigger: CGCGAGTGTGCAATGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTTTCCAGATCGCTGGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
3UTR CAA 72 bp CCCACCATCCTTCCTTCACTTTCTCGGATTCAGAATTaGTGGGAGAAGTTTGACGGGTCACCAGCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: PTILPSLSRIQN*WEKFDGSPAAQ
Trigger: CTGGGCTGCTGGTGACCCGTCAAACTTCTCCCACAAATTCTGAATCCGAGAAAGTGAAGGAAGGATGGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR TCA 90 bp CACGTCACAGGTCTTAACTCTGCCTCGCAGGGGTTTTGGAAACTGTTCCTTCACAGACCACAGAAAATCTaGAGCAAGGGGCTTGGCGGT +
Preference number: 4 (lower is better)
Translates to: HVTGLNSASQGFWKLFLHRPQKI*SKGLGG
Trigger: ACCGCCAAGCCCCTTGCTTCAGATTTTCTGTGGTCT...GTGAAGGAACAGTTTCCAAAACCCCTGCGAGGCAGAGTTAAGACCTGTGACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR TCA 90 bp GCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCAAGAGGCCCTAACTCTATCCCTTaGTATCACACACGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: AYLHVPPQASETPASPRGPNSIP*YHTRLQ
Trigger: TTGCAGCCGTGTGTGATATCAAGGGATAGAGTTAGG...GCCTCTTGGTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp AAGAGGCACGTTCTGAATTTGTGTTGTTGCTCGTCCAAACATTGCACACTCGCGACTCAACAGTGCATGTaGCCCTGGGTGTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: KRHVLNLCCCSSKHCTLATQQCM*PWVWGT
Trigger: TGTCCCCCACACCCAGGGGCACATGCACTGTTGAGT...CGCGAGTGTGCAATGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR GCA 90 bp CGATCTGGAAAGAGGCACGTTCTGAATTTGTGTTGTTGCTCGTCCAAACATTGCCTGGTGTCGTGTCGGTaGCTCCTTCCAAGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: RSGKRHVLNLCCCSSKHCLVSCR*LLPRLQ
Trigger: CTGCAGCCTTGGAAGGAGGCACCGACACGACACCAG...GCAATGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTTTCCAGATCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR GCA 90 bp TTGTTGCTCGTCCAAACATTGCACACTCGCGTGTTTCTGGGACACCAAAGTAAACTGGTGTCGTGTCGGTaGCTCCTTCCAAGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: LLLVQTLHTRVFLGHQSKLVSCR*LLPRLQ
Trigger: CTGCAGCCTTGGAAGGAGGCACCGACACGACACCAG...TTTACTTTGGTGTCCCAGAAACACGCGAGTGTGCAATGTTTGGACGAGCAACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR GCA 90 bp CTGGGCATTGATATCCTCTGTATTTACTGTTTATGGCTCTCCAGACGTGATAAAGACAGGGCCACGACCTaGGCCTGCCGAGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: LGIDILCIYCLWLSRRDKDRATT*ACRASR
Trigger: CCTGGATGCTCGGCAGGCGCAGGTCGTGGCCCTGTC...TTTATCACGTCTGGAGAGCCATAAACAGTAAATACAGAGGATATCAATGCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp TTTGTGGCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCAAGGGTCACCCTTGACTaGCTCGACTACCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: FVAYLHVPPQASETPASPRVTLD*LDYLLL
Trigger: AAGGAGAAGGTAGTCGAGGCAGTCAAGGGTGACCCT...TGGTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGCCACAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp TCGTCCAAACATTGCACACTCGCGTGTTTCTGGGACACCAAAGTAAAACGAATGGAGCCCTTCCATCTCTaGAGAGGTGGCACAGCCCCT +
Preference number: 4 (lower is better)
Translates to: SSKHCTLACFWDTKVKRMEPFHL*RGGTAP
Trigger: AGGGGCTGTGCCACCTCTGCAGAGATGGAAGGGCTC...CATTCGTTTTACTTTGGTGTCCCAGAAACACGCGAGTGTGCAATGTTTGGACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp TCTTCATTTGTGGCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCAGATATCACACACGGCTaGAAAACCGGGGCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: SSFVAYLHVPPQASETPADITHG*KTGAGG
Trigger: ACCTCCAGCCCCGGTTTTGCAGCCGTGTGTGATATC...TGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGCCACAAATGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp GCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCAAGAGGCGAGTCCAAAAATGACTaGAGCAACTCCCTGTGCACA +
Preference number: 4 (lower is better)
Translates to: AYLHVPPQASETPASPRGESKND*SNSLCT
Trigger: TGTGCACAGGGAGTTGCTGCAGTCATTTTTGGACTC...GCCTCTTGGTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp TCTTCATTTGTGGCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCACTGGGGCCAGCGATCTaGAAAGAGGCACGTTCTGAA +
Preference number: 4 (lower is better)
Translates to: SSFVAYLHVPPQASETPALGPAI*KEARSE
Trigger: TTCAGAACGTGCCTCTTTCCAGATCGCTGGCCCCAG...TGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGCCACAAATGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR CCA 90 bp TCTTCATTTGTGGCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATGGTTTCTCTGGGGCTaGGGTGGGCATGGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: SSFVAYLHVPPQASETPAWFLWG*GGHGFS
Trigger: AGAAAAGCCATGCCCACCCCAGCCCCAGAGAAACCA...TGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGCCACAAATGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR CCA 90 bp GCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCAAGAGGCGCCTCGCAGGGGTTTTaGAAACTGTTCCTTCACTTT +
Preference number: 4 (lower is better)
Translates to: AYLHVPPQASETPASPRGASQGF*KLFLHF
Trigger: AAAGTGAAGGAACAGTTTCCAAAACCCCTGCGAGGC...GCCTCTTGGTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR CCA 90 bp CGTGTAGGGTCACCCTTGACTGCCTCGACTACCTTCTCCTTTCACTACCCAGGGTCACTCTGGCTGCATTaGAAACTCTTCTGTCGCTAT +
Preference number: 4 (lower is better)
Translates to: RVGSPLTASTTFSFHYPGSLWLH*KLFCRY
Trigger: ATAGCGACAGAAGAGTTTCCAATGCAGCCAGAGTGA...CCCTGGGTAGTGAAAGGAGAAGGTAGTCGAGGCAGTCAAGGGTGACCCTACACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp CCAGCGATCTGGAAAGAGGCACGTTCTGAATTTGTGTTGTTGCTCGTCCAAACACCCTTCGGGCACTCCTaGCACTGTGGAATCCTAGGA +
Preference number: 4 (lower is better)
Translates to: PAIWKEARSEFVLLLVQTPFGHS*HCGILG
Trigger: TCCTAGGATTCCACAGTGCCAGGAGTGCCCGAAGGG...TGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTTTCCAGATCGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp CTTGACTATGTACAGCACAATGTTATTCTTGCACTTTCTGGGGTGGTCAGCTGGCACCGCATCTCTGGTTaGTCCCTGTGGCCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: LDYVQHNVILALSGVVSWHRISG*SLWPLL
Trigger: GAGCAGAGGCCACAGGGACCAACCAGAGATGCGGTG...CCAGCTGACCACCCCAGAAAGTGCAAGAATAACATTGTGCTGTACATAGTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp GCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCAAGAGGCCAGGTGATCTCGCCTTaGTGTTTAGGGAATGCTCAT +
Preference number: 4 (lower is better)
Translates to: AYLHVPPQASETPASPRGQVISP*CLGNAH
Trigger: ATGAGCATTCCCTAAACACCAAGGCGAGATCACCTG...GCCTCTTGGTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp CACGTCACAGGTCTTAACTCTGCCTCGCAGGGGTTTTGGAAACTGTTCCTTCACTGTGAAAAGAGGCACTaGGACCAGGTGATCTCGCCT +
Preference number: 4 (lower is better)
Translates to: HVTGLNSASQGFWKLFLHCEKRH*DQVISP
Trigger: AGGCGAGATCACCTGGTCCCAGTGCCTCTTTTCACA...GTGAAGGAACAGTTTCCAAAACCCCTGCGAGGCAGAGTTAAGACCTGTGACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR TCA 90 bp TCGTCCAAACATTGCACACTCGCGTGTTTCTGGGACACCAAAGTAAAACGAATGAGCCCACATCCCCTCTaGCAGATCCCTCCACGGAAA +
Preference number: 4 (lower is better)
Translates to: SSKHCTLACFWDTKVKRMSPHPL*QIPPRK
Trigger: TTTCCGTGGAGGGATCTGTCAGAGGGGATGTGGGCT...CATTCGTTTTACTTTGGTGTCCCAGAAACACGCGAGTGTGCAATGTTTGGACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR TCA 90 bp TCGTCCAAACATTGCACACTCGCGTGTTTCTGGGACACCAAAGTAAAACGAATGGTTCTGACCTGGACCTaGGGGCGAAATCCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: SSKHCTLACFWDTKVKRMVLTWT*GRNPQA
Trigger: AGCCTGAGGATTTCGCCCTCAGGTCCAGGTCAGAAC...CATTCGTTTTACTTTGGTGTCCCAGAAACACGCGAGTGTGCAATGTTTGGACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR TCA 90 bp GACACTAACTTTTTGACTAAGAACCAGGCCGGAAACCACATTGCTGATCTTCCTGGTGCTGGGATGTTCTaGCCTGGACCTGAGGGCGAA +
Preference number: 4 (lower is better)
Translates to: DTNFLTKNQAGNHIADLPGAGMF*PGPEGE
Trigger: TTCGCCCTCAGGTCCAGGTCAGAACATCCCAGCACC...AGGAAGATCAGCAATGTGGTTTCCGGCCTGGTTCTTAGTCAAAAAGTTAGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR TCA 90 bp GCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCAAGAGGCCAGACACTAACTTTTTaGCTAAGAACCAGGCCGGAA +
Preference number: 4 (lower is better)
Translates to: AYLHVPPQASETPASPRGQTLTF*LRTRPE
Trigger: TTCCGGCCTGGTTCTTAGTCAAAAAGTTAGTGTCTG...GCCTCTTGGTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp CTGGGCATTGATATCCTCTGTATTTACTGTTTATGGCTCTCCAGACGTGATAAACAGACAGCACGTGCTTaGAGAGCCGGGATGGGCCCC +
Preference number: 4 (lower is better)
Translates to: LGIDILCIYCLWLSRRDKQTARA*RAGMGP
Trigger: GGGGCCCATCCCGGCTCTGCAAGCACGTGCTGTCTG...TTTATCACGTCTGGAGAGCCATAAACAGTAAATACAGAGGATATCAATGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp ACAGGAAGAGTCGGCGCTAACTCAACAGTGCATGTGCCCCTGGGTGTGGGGGACGGAAGGTTGACAATATaGTTACTTTATCTTTCCGCT +
Preference number: 4 (lower is better)
Translates to: TGRVGANSTVHVPLGVGDGRLTI*LLYLSA
Trigger: AGCGGAAAGATAAAGTAAGCATATTGTCAACCTTCC...GTCCCCCACACCCAGGGGCACATGCACTGTTGAGTTAGCGCCGACTCTTCCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp CTGCAGAAACAGCGTGATTTGGAGCCCACTGGGACAAAGCATTATATGCTTCTCAGACCAGCTGCAGTTTaGACAAGTGGCCCCCATTCC +
Preference number: 4 (lower is better)
Translates to: LQKQRDLEPTGTKHYMLLRPAAV*TSGPHS
Trigger: GGAATGGGGGCCACTTGTGCAAACTGCAGCTGGTCT...GAGAAGCATATAATGCTTTGTCCCAGTGGGCTCCAAATCACGCTGTTTCTGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp TGCAGAAACAGCGTGATTTGGAGCCCACTGGGACAAAGCATTATATGCTTCTCTGGTCATGACGATTCCTaGCAGCGCTTTATGGCGGGC +
Preference number: 4 (lower is better)
Translates to: CRNSVIWSPLGQSIICFSGHDDS*QRFMAG
Trigger: GCCCGCCATAAAGCGCTGGCAGGAATCGTCATGACC...AGAGAAGCATATAATGCTTTGTCCCAGTGGGCTCCAAATCACGCTGTTTCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp CGATCTGGAAAGAGGCACGTTCTGAATTTGTGTTGTTGCTCGTCCAAACATTGCCAACCCAGCCATCACTaGGGCTCTGGGGACACTGTT +
Preference number: 4 (lower is better)
Translates to: RSGKRHVLNLCCCSSKHCQPSHH*GSGDTV
Trigger: AACAGTGTCCCCAGAGCCCCAGTGATGGCTGGGTTG...GCAATGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTTTCCAGATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381310.7
CDS-3UTR CCA 90 bp CCAGCGATCTGGAAAGAGGCACGTTCTGAATTTGTGTTGTTGCTCGTCCAAACATGGTTTCTCTGGGGCTaGGGTGGGCATGGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: PAIWKEARSEFVLLLVQTWFLWG*GGHGFS
Trigger: AGAAAAGCCATGCCCACCCCAGCCCCAGAGAAACCA...TGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTTTCCAGATCGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR CCA 90 bp ACTCCACAGGAAGAGTCGGCGCTAACTCAACAGTGCATGTGCCCCTGGGTGTGGTGGCTTTCGTTTCTCTaGTTCTATTTTAGGTGTTCG +
Preference number: 4 (lower is better)
Translates to: TPQEESALTQQCMCPWVWWLSFL*FYFRCS
Trigger: CGAACACCTAAAATAGAACCAGAGAAACGAAAGCCA...CCACACCCAGGGGCACATGCACTGTTGAGTTAGCGCCGACTCTTCCTGTGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR CCA 90 bp CGATCTGGAAAGAGGCACGTTCTGAATTTGTGTTGTTGCTCGTCCAAACATTGCTCACTACCCAGGGCCTaGGACCCTCCTTTCCTTACG +
Preference number: 4 (lower is better)
Translates to: RSGKRHVLNLCCCSSKHCSLPRA*DPPFLT
Trigger: CGTAAGGAAAGGAGGGTCCCAGGCCCTGGGTAGTGA...GCAATGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTTTCCAGATCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp TCGTCCAAACATTGCACACTCGCGTGTTTCTGGGACACCAAAGTAAAACGAATGACTGCAGGGCAGACATaGCCTGAAAGTGGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: SSKHCTLACFWDTKVKRMTAGQT*PESGAG
Trigger: CCCAGCACCACTTTCAGGCCATGTCTGCCCTGCAGT...CATTCGTTTTACTTTGGTGTCCCAGAAACACGCGAGTGTGCAATGTTTGGACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR TCA 90 bp GGAAAGGCTCCGGCACCTCAACCTCACTCTGGCTGCATTGGAAACTCTTCTGTCAGGAGCGAGGAAGGTTaGCAATATGCTTACTTTATC +
Preference number: 4 (lower is better)
Translates to: GKAPAPQPHSGCIGNSSVRSEEG*QYAYFI
Trigger: GATAAAGTAAGCATATTGTCAACCTTCCTCGCTCCT...GACAGAAGAGTTTCCAATGCAGCCAGAGTGAGGTTGAGGTGCCGGAGCCTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR TCA 90 bp CTTGACTATGTACAGCACAATGTTATTCTTGCACTTTCTGGGGTGGTCAGCTGGATGAGTTCTCGGAGGTaGGATGACAGCAGCTCGAGG +
Preference number: 4 (lower is better)
Translates to: LDYVQHNVILALSGVVSWMSSRR*DDSSSR
Trigger: CCTCGAGCTGCTGTCATCTCACCTCCGAGAACTCAT...CCAGCTGACCACCCCAGAAAGTGCAAGAATAACATTGTGCTGTACATAGTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR TCA 90 bp TCGTCCAAACATTGCACACTCGCGTGTTTCTGGGACACCAAAGTAAAACGAATGGAGGAAGCCAGACGGTaGTTTCGAGGTGGACTTGGA +
Preference number: 4 (lower is better)
Translates to: SSKHCTLACFWDTKVKRMEEARR*FRGGLG
Trigger: TCCAAGTCCACCTCGAAATCACCGTCTGGCTTCCTC...CATTCGTTTTACTTTGGTGTCCCAGAAACACGCGAGTGTGCAATGTTTGGACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp AAGAGGCACGTTCTGAATTTGTGTTGTTGCTCGTCCAAACATTGCACACTCGCGAGTAGAAACTGCTGCTaGTCCGGTGGTTTCCTCACC +
Preference number: 4 (lower is better)
Translates to: KRHVLNLCCCSSKHCTLASRNCC*SGGFLT
Trigger: GGTGAGGAAACCACCGGAGCAGCAGCAGTTTCTACT...CGCGAGTGTGCAATGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR GCA 90 bp TCACCAGGGTTTGATCTGTCTGCGGTTCCCGCAGGAGTGATATTGTTTGGTGTGTGGCTTATCTTCATGTaGCCCCTCAAGCTAGTGAGA +
Preference number: 4 (lower is better)
Translates to: SPGFDLSAVPAGVILFGVWLIFM*PLKLVR
Trigger: TCTCACTAGCTTGAGGGGGCACATGAAGATAAGCCA...CACACCAAACAATATCACTCCTGCGGGAACCGCAGACAGATCAAACCCTGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp TGCAGAAACAGCGTGATTTGGAGCCCACTGGGACAAAGCATTATATGCTTCTCTCTCCACAGGGGGAGGTaGTCACGTAGAGATGGAAGA +
Preference number: 4 (lower is better)
Translates to: CRNSVIWSPLGQSIICFSLHRGR*SRRDGR
Trigger: TCTTCCATCTCTACGTGAGCACCTCCCCCTGTGGAG...AGAGAAGCATATAATGCTTTGTCCCAGTGGGCTCCAAATCACGCTGTTTCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp CCAGCGATCTGGAAAGAGGCACGTTCTGAATTTGTGTTGTTGCTCGTCCAAACAGAGCTCTGCAAAAACTaGAGGCGAGGACAGGCTTTG +
Preference number: 4 (lower is better)
Translates to: PAIWKEARSEFVLLLVQTELCKN*RRGQAL
Trigger: CAAAGCCTGTCCTCGCCTGCAGTTTTTGCAGAGCTC...TGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTTTCCAGATCGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp CACGTCACAGGTCTTAACTCTGCCTCGCAGGGGTTTTGGAAACTGTTCCTTCACTTGGTGTTTAGGGAATaGTCATCCCTCCAACCTTGG +
Preference number: 4 (lower is better)
Translates to: HVTGLNSASQGFWKLFLHLVFRE*SSLQPW
Trigger: CCAAGGTTGGAGGGATGAGCATTCCCTAAACACCAA...GTGAAGGAACAGTTTCCAAAACCCCTGCGAGGCAGAGTTAAGACCTGTGACGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp CACGTCACAGGTCTTAACTCTGCCTCGCAGGGGTTTTGGAAACTGTTCCTTCACTTCTGTGTGACCAGCTaGGATATGGAGTCTGCGAAT +
Preference number: 4 (lower is better)
Translates to: HVTGLNSASQGFWKLFLHFCVTS*DMESAN
Trigger: ATTCGCAGACTCCATATCCCAGCTGGTCACACAGAA...GTGAAGGAACAGTTTCCAAAACCCCTGCGAGGCAGAGTTAAGACCTGTGACGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp CTGGGCATTGATATCCTCTGTATTTACTGTTTATGGCTCTCCAGACGTGATAAAGGCGGTGTCAGGTGGTaGGAAGTGCGAGGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: LGIDILCIYCLWLSRRDKGGVRW*EVRGSQ
Trigger: CTGGCTTCCTCGCACTTCCCACCACCTGACACCGCC...TTTATCACGTCTGGAGAGCCATAAACAGTAAATACAGAGGATATCAATGCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp CTGGGCATTGATATCCTCTGTATTTACTGTTTATGGCTCTCCAGACGTGATAAAGGCGGCTCCCTGACATaGACTAGGGGACTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LGIDILCIYCLWLSRRDKGGSLT*TRGLCS
Trigger: GCTGCAGAGTCCCCTAGTCCATGTCAGGGAGCCGCC...TTTATCACGTCTGGAGAGCCATAAACAGTAAATACAGAGGATATCAATGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp CCAGCGATCTGGAAAGAGGCACGTTCTGAATTTGTGTTGTTGCTCGTCCAAACACACCAGCGTTCCTTCTaGTGGGAGGTCAGAACATGT +
Preference number: 4 (lower is better)
Translates to: PAIWKEARSEFVLLLVQTHQRSF*WEVRTC
Trigger: ACATGTTCTGACCTCCCACCAGAAGGAACGCTGGTG...TGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTTTCCAGATCGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp ACGGAAAGGCTCCGGCACCTCAACCTCACTCTGGCTGCATTGGAAACTCTTCTGAGGAGTGATATTGTTTaGTGTGAATCTCTAGAGGCC +
Preference number: 4 (lower is better)
Translates to: TERLRHLNLTLAALETLLRSDIV*CESLEA
Trigger: GGCCTCTAGAGATTCACACCAAACAATATCACTCCT...CAGAAGAGTTTCCAATGCAGCCAGAGTGAGGTTGAGGTGCCGGAGCCTTTCCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR TCA 90 bp CTCTCACCAGGGTTTGATCTGTCTGCGGTTCCCGCAGGAGTGATATTGTTTGGTGAAAGAGGCACGTTCTaGATTTGTGTTGTTGCTCGT +
Preference number: 4 (lower is better)
Translates to: LSPGFDLSAVPAGVILFGERGTF*ICVVAR
Trigger: ACGAGCAACAACACAAATTCAGAACGTGCCTCTTTC...ACCAAACAATATCACTCCTGCGGGAACCGCAGACAGATCAAACCCTGGTGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR TCA 90 bp AAGAGGCACGTTCTGAATTTGTGTTGTTGCTCGTCCAAACATTGCACACTCGCGTCGAATTGTTCTCTATaGCTTGCTCCCACTGGGCTG +
Preference number: 4 (lower is better)
Translates to: KRHVLNLCCCSSKHCTLASNCSL*LAPTGL
Trigger: CAGCCCAGTGGGAGCAAGTCATAGAGAACAATTCGA...CGCGAGTGTGCAATGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR TCA 90 bp CTTGACTATGTACAGCACAATGTTATTCTTGCACTTTCTGGGGTGGTCAGCTGGCAGATGAAGGTGATTTaGGGCCTGGGTGGGAGACTT +
Preference number: 4 (lower is better)
Translates to: LDYVQHNVILALSGVVSWQMKVI*GLGGRL
Trigger: AAGTCTCCCACCCAGGCCTCAAATCACCTTCATCTG...CCAGCTGACCACCCCAGAAAGTGCAAGAATAACATTGTGCTGTACATAGTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR TCA 90 bp GCTTCCCAGAAACAGCCTGAGAAGGAAGCTCCTCTGTCTCCACCGCATCTCTGGAGACTACAGAAAATCTaGAGCAAGGGTATGAATACA +
Preference number: 4 (lower is better)
Translates to: ASQKQPEKEAPLSPPHLWRLQKI*SKGMNT
Trigger: TGTATTCATACCCTTGCTTCAGATTTTCTGTAGTCT...CCAGAGATGCGGTGGAGACAGAGGAGCTTCCTTCTCAGGCTGTTTCTGGGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp CTTGACTATGTACAGCACAATGTTATTCTTGCACTTTCTGGGGTGGTCAGCTGGAGTAGAAACTGCTGCTaGTCCGGTGGTTTCCTCACC +
Preference number: 4 (lower is better)
Translates to: LDYVQHNVILALSGVVSWSRNCC*SGGFLT
Trigger: GGTGAGGAAACCACCGGAGCAGCAGCAGTTTCTACT...CCAGCTGACCACCCCAGAAAGTGCAAGAATAACATTGTGCTGTACATAGTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp TCGTCCAAACATTGCACACTCGCGTGTTTCTGGGACACCAAAGTAAAACGAATGGTCAGTAGAAACTGCTaGTGCTCCGGTGGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: SSKHCTLACFWDTKVKRMVSRNC*CSGGFL
Trigger: GAGGAAACCACCGGAGCAGCAGCAGTTTCTACTGAC...CATTCGTTTTACTTTGGTGTCCCAGAAACACGCGAGTGTGCAATGTTTGGACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR GCA 90 bp GCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCAAGAGGCCTGAATTTGTGTTGTTaGTCGTCCAAACATTGCACA +
Preference number: 4 (lower is better)
Translates to: AYLHVPPQASETPASPRGLNLCC*SSKHCT
Trigger: TGTGCAATGTTTGGACGAGCAACAACACAAATTCAG...GCCTCTTGGTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR GCA 90 bp TGCAGAAACAGCGTGATTTGGAGCCCACTGGGACAAAGCATTATATGCTTCTCTGTTATGAGAGGCGGCTaGAGCGATCCAACGGTAGTA +
Preference number: 4 (lower is better)
Translates to: CRNSVIWSPLGQSIICFSVMRGG*SDPTVV
Trigger: TACTACCGTTGGATCGCTGCAGCCGCCTCTCATAAC...AGAGAAGCATATAATGCTTTGTCCCAGTGGGCTCCAAATCACGCTGTTTCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp CTGGGCATTGATATCCTCTGTATTTACTGTTTATGGCTCTCCAGACGTGATAAATGGCCTCACAGTACATaGAGGGCGTGTCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: LGIDILCIYCLWLSRRDKWPHST*RACLQG
Trigger: GCCCTGGAGACACGCCCTCCATGTACTGTGAGGCCA...TTTATCACGTCTGGAGAGCCATAAACAGTAAATACAGAGGATATCAATGCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp AAGAGGCACGTTCTGAATTTGTGTTGTTGCTCGTCCAAACATTGCACACTCGCGAGATCTCTAGAGATGTaGCCACCAGCGTTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: KRHVLNLCCCSSKHCTLARSLEM*PPAFLL
Trigger: CAGAAGGAACGCTGGTGGCCACATCTCTAGAGATCT...CGCGAGTGTGCAATGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR CAA 72 bp GCGATCTGGAAAGAGGCACGTTCTGAATTTGTGTTGTaGCTCGTCCAAACATTGCACACTCGCGTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: AIWKEARSEFVL*LVQTLHTRVFL
Trigger: CAGAAACACGCGAGTGTGCAATGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTTTCCAGATCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
3UTR CAA 72 bp CCAGCGATCTGGAAAGAGGCACGTTCTGAATTTGTGTaGTTGCTCGTCCAAACATTGCACACTCGCGTGTTT +
Preference number: 4 (lower is better)
Translates to: PAIWKEARSEFV*LLVQTLHTRVF
Trigger: AAACACGCGAGTGTGCAATGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTTTCCAGATCGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
3UTR CAA 72 bp CTTCACTTTCTCGGATTCAGAATTTGTGGGAGAAGTTaGACGGGTCACCAGCAGCCCAGTGTTTCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: LHFLGFRICGRS*TGHQQPSVSRN
Trigger: GTTTCTGGAAACACTGGGCTGCTGGTGACCCGTCAAACTTCTCCCACAAATTCTGAATCCGAGAAAGTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR TCA 90 bp CTGGGCATTGATATCCTCTGTATTTACTGTTTATGGCTCTCCAGACGTGATAAACCAGGCCTTTGGTCATaGCGATTCCTGCCAGCGCTT +
Preference number: 4 (lower is better)
Translates to: LGIDILCIYCLWLSRRDKPGLWS*RFLPAL
Trigger: AAGCGCTGGCAGGAATCGTCATGACCAAAGGCCTGG...TTTATCACGTCTGGAGAGCCATAAACAGTAAATACAGAGGATATCAATGCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR TCA 90 bp CGATCTGGAAAGAGGCACGTTCTGAATTTGTGTTGTTGCTCGTCCAAACATTGCAGGAGAGTCCAAAAATaGCTGCAGCAACTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: RSGKRHVLNLCCCSSKHCRRVQK*LQQLPV
Trigger: CACAGGGAGTTGCTGCAGTCATTTTTGGACTCTCCT...GCAATGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTTTCCAGATCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp TTGTTGCTCGTCCAAACATTGCACACTCGCGTGTTTCTGGGACACCAAAGTAAAAGAGTCAGTAGAAACTaGTGCTGCTCCGGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: LLLVQTLHTRVFLGHQSKRVSRN*CCSGGF
Trigger: GAAACCACCGGAGCAGCAGCAGTTTCTACTGACTCT...TTTACTTTGGTGTCCCAGAAACACGCGAGTGTGCAATGTTTGGACGAGCAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR GCA 90 bp GACACTAACTTTTTGACTAAGAACCAGGCCGGAAACCACATTGCTGATCTTCCTATGCCAGGACTCAGGTaGTTGAAAGGAGCGAGGAAG +
Preference number: 4 (lower is better)
Translates to: DTNFLTKNQAGNHIADLPMPGLR*LKGARK
Trigger: CTTCCTCGCTCCTTTCAAGCACCTGAGTCCTGGCAT...AGGAAGATCAGCAATGTGGTTTCCGGCCTGGTTCTTAGTCAAAAAGTTAGTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp CTCTCACCAGGGTTTGATCTGTCTGCGGTTCCCGCAGGAGTGATATTGTTTGGTTTCACTTTGTGGGAATaGCTTTCGTTTCTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: LSPGFDLSAVPAGVILFGFTLWE*LSFLWF
Trigger: GAACCAGAGAAACGAAAGCCATTCCCACAAAGTGAA...ACCAAACAATATCACTCCTGCGGGAACCGCAGACAGATCAAACCCTGGTGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp CTGCAGAAACAGCGTGATTTGGAGCCCACTGGGACAAAGCATTATATGCTTCTCTTGGAGGGGAATGGGTaGCCACTCTTAAGACCAATT +
Preference number: 4 (lower is better)
Translates to: LQKQRDLEPTGTKHYMLLLEGNG*PLLRPI
Trigger: AATTGGTCTTAAGAGTGGCCACCCATTCCCCTCCAA...GAGAAGCATATAATGCTTTGTCCCAGTGGGCTCCAAATCACGCTGTTTCTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp CATTTGTGGCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCTCTCAGCTTCCCTTTaGTCTCTGTTAGAAAGTGAT +
Preference number: 4 (lower is better)
Translates to: HLWLIFMCPLKLVRPQHHLSASL*SLLESD
Trigger: ATCACTTTCTAACAGAGACCAAAGGGAAGCTGAGAG...GTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGCCACAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR TCA 90 bp GACACTAACTTTTTGACTAAGAACCAGGCCGGAAACCACATTGCTGATCTTCCTTCTTGGACTTGCATTTaGGTTGACTGCTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: DTNFLTKNQAGNHIADLPSWTCI*VDCSAL
Trigger: GAGGGCTGAGCAGTCAACTCAAATGCAAGTCCAAGA...AGGAAGATCAGCAATGTGGTTTCCGGCCTGGTTCTTAGTCAAAAAGTTAGTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR TCA 90 bp CGATCTGGAAAGAGGCACGTTCTGAATTTGTGTTGTTGCTCGTCCAAACATTGCTGGAAGGTCAATGCCTaGGACAAAACGAATCCCAAC +
Preference number: 4 (lower is better)
Translates to: RSGKRHVLNLCCCSSKHCWKVNA*DKTNPN
Trigger: GTTGGGATTCGTTTTGTCTCAGGCATTGACCTTCCA...GCAATGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTTTCCAGATCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR TCA 90 bp TTGTTGCTCGTCCAAACATTGCACACTCGCGTGTTTCTGGGACACCAAAGTAAAGCTATCGGCCTTCTCTaGAGAGCTTTAATCTCTCCT +
Preference number: 4 (lower is better)
Translates to: LLLVQTLHTRVFLGHQSKAIGLL*RALISP
Trigger: AGGAGAGATTAAAGCTCTTCAGAGAAGGCCGATAGC...TTTACTTTGGTGTCCCAGAAACACGCGAGTGTGCAATGTTTGGACGAGCAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp TTGTTGCTCGTCCAAACATTGCACACTCGCGTGTTTCTGGGACACCAAAGTAAACAACCTCACTCTGGCTaGATTGGAAACTCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: LLLVQTLHTRVFLGHQSKQPHSG*IGNSSV
Trigger: GACAGAAGAGTTTCCAATGCAGCCAGAGTGAGGTTG...TTTACTTTGGTGTCCCAGAAACACGCGAGTGTGCAATGTTTGGACGAGCAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR TCA 90 bp CGATCTGGAAAGAGGCACGTTCTGAATTTGTGTTGTTGCTCGTCCAAACATTGCGAAAGAGGCACGTTCTaGATTTGTGTTGTTGCTCGT +
Preference number: 4 (lower is better)
Translates to: RSGKRHVLNLCCCSSKHCERGTF*ICVVAR
Trigger: ACGAGCAACAACACAAATTCAGAACGTGCCTCTTTC...GCAATGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTTTCCAGATCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR TCA 90 bp CACGTCACAGGTCTTAACTCTGCCTCGCAGGGGTTTTGGAAACTGTTCCTTCACTATTTCAGTAAAGTCTaGGTTGTTTCTGGAAGGTCA +
Preference number: 4 (lower is better)
Translates to: HVTGLNSASQGFWKLFLHYFSKV*VVSGRS
Trigger: TGACCTTCCAGAAACAACTCAGACTTTACTGAAATA...GTGAAGGAACAGTTTCCAAAACCCCTGCGAGGCAGAGTTAAGACCTGTGACGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR TCA 90 bp CTGCAGAAACAGCGTGATTTGGAGCCCACTGGGACAAAGCATTATATGCTTCTCTTGCTTACAAAATGCTaGAAACTAACGGGGCACACT +
Preference number: 4 (lower is better)
Translates to: LQKQRDLEPTGTKHYMLLLLTKC*KLTGHT
Trigger: AGTGTGCCCCGTTAGTTTTCAGCATTTTGTAAGCAA...GAGAAGCATATAATGCTTTGTCCCAGTGGGCTCCAAATCACGCTGTTTCTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp CTGGGCATTGATATCCTCTGTATTTACTGTTTATGGCTCTCCAGACGTGATAAATTCTTCCAGACCAGCTaGAGTTTGCACAAGTGGCCC +
Preference number: 4 (lower is better)
Translates to: LGIDILCIYCLWLSRRDKFFQTS*SLHKWP
Trigger: GGGCCACTTGTGCAAACTGCAGCTGGTCTGGAAGAA...TTTATCACGTCTGGAGAGCCATAAACAGTAAATACAGAGGATATCAATGCCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp TTGTTGCTCGTCCAAACATTGCACACTCGCGTGTTTCTGGGACACCAAAGTAAAACACTCGCGTGTTTCTaGGACACCAAAGTAAAACGA +
Preference number: 4 (lower is better)
Translates to: LLLVQTLHTRVFLGHQSKTLACF*DTKVKR
Trigger: TCGTTTTACTTTGGTGTCCCAGAAACACGCGAGTGT...TTTACTTTGGTGTCCCAGAAACACGCGAGTGTGCAATGTTTGGACGAGCAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR CCA 90 bp AAGAGGCACGTTCTGAATTTGTGTTGTTGCTCGTCCAAACATTGCACACTCGCGTGTTCCTTCACTTTGTaGGAATGGCTTTCGTTTCTC +
Preference number: 4 (lower is better)
Translates to: KRHVLNLCCCSSKHCTLACSFTL*EWLSFL
Trigger: GAGAAACGAAAGCCATTCCCACAAAGTGAAGGAACA...CGCGAGTGTGCAATGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR CCA 90 bp CCAGCGATCTGGAAAGAGGCACGTTCTGAATTTGTGTTGTTGCTCGTCCAAACATTAAGACCAATTCAGTaGTCAAAACTGCAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: PAIWKEARSEFVLLLVQTLRPIQ*SKLQGR
Trigger: TCTGCCCTGCAGTTTTGACCACTGAATTGGTCTTAA...TGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTTTCCAGATCGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp TCGTCCAAACATTGCACACTCGCGTGTTTCTGGGACACCAAAGTAAAACGAATGCGGATTCAGAATTTGTaGGAGAAGTTTGACGGGTCA +
Preference number: 4 (lower is better)
Translates to: SSKHCTLACFWDTKVKRMRIQNL*EKFDGS
Trigger: TGACCCGTCAAACTTCTCCCACAAATTCTGAATCCG...CATTCGTTTTACTTTGGTGTCCCAGAAACACGCGAGTGTGCAATGTTTGGACGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
3UTR CAA 72 bp GCACGTTCTGAATTTGTGTTGTTGCTCGTCCAAACATaGCACACTCGCGTGTTTCTGGGACACCAAAGTAAA +
Preference number: 4 (lower is better)
Translates to: ARSEFVLLLVQT*HTRVFLGHQSK
Trigger: TTTACTTTGGTGTCCCAGAAACACGCGAGTGTGCAATGTTTGGACGAGCAACAACACAAATTCAGAACGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
3UTR CAA 72 bp CTGCAAAAAGGCCAGAAACCACCAGACACTAACTTTTaGACTAAGAACCAGGCCGGAAACCACATTGCTGAT +
Preference number: 4 (lower is better)
Translates to: LQKGQKPPDTNF*TKNQAGNHIAD
Trigger: ATCAGCAATGTGGTTTCCGGCCTGGTTCTTAGTCAAAAAGTTAGTGTCTGGTGGTTTCTGGCCTTTTTGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp AAGAGGCACGTTCTGAATTTGTGTTGTTGCTCGTCCAAACATTGCACACTCGCGTGGCTTTCGTTTCTCTaGTTCTATTTTAGGTGTTCG +
Preference number: 4 (lower is better)
Translates to: KRHVLNLCCCSSKHCTLAWLSFL*FYFRCS
Trigger: CGAACACCTAAAATAGAACCAGAGAAACGAAAGCCA...CGCGAGTGTGCAATGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR CCA 90 bp TTGTTGCTCGTCCAAACATTGCACACTCGCGTGTTTCTGGGACACCAAAGTAAATTCACTTTGTGGGAATaGCTTTCGTTTCTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: LLLVQTLHTRVFLGHQSKFTLWE*LSFLWF
Trigger: GAACCAGAGAAACGAAAGCCATTCCCACAAAGTGAA...TTTACTTTGGTGTCCCAGAAACACGCGAGTGTGCAATGTTTGGACGAGCAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR CCA 90 bp CGATCTGGAAAGAGGCACGTTCTGAATTTGTGTTGTTGCTCGTCCAAACATTGCTGTTCCTTCACTTTGTaGGAATGGCTTTCGTTTCTC +
Preference number: 4 (lower is better)
Translates to: RSGKRHVLNLCCCSSKHCCSFTL*EWLSFL
Trigger: GAGAAACGAAAGCCATTCCCACAAAGTGAAGGAACA...GCAATGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTTTCCAGATCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR TCA 90 bp GACACTAACTTTTTGACTAAGAACCAGGCCGGAAACCACATTGCTGATCTTCCTAACTATTCTGGGCATTaGTATCCTCTGTATTTACTG +
Preference number: 4 (lower is better)
Translates to: DTNFLTKNQAGNHIADLPNYSGH*YPLYLL
Trigger: CAGTAAATACAGAGGATATCAATGCCCAGAATAGTT...AGGAAGATCAGCAATGTGGTTTCCGGCCTGGTTCTTAGTCAAAAAGTTAGTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp CTGGGCATTGATATCCTCTGTATTTACTGTTTATGGCTCTCCAGACGTGATAAATTTCTGGAAGGTCAATaGCTGAGACAAAACGAATCC +
Preference number: 4 (lower is better)
Translates to: LGIDILCIYCLWLSRRDKFLEGQ*LRQNES
Trigger: GGATTCGTTTTGTCTCAGGCATTGACCTTCCAGAAA...TTTATCACGTCTGGAGAGCCATAAACAGTAAATACAGAGGATATCAATGCCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp CGATCTGGAAAGAGGCACGTTCTGAATTTGTGTTGTTGCTCGTCCAAACATTGCGAACTTAATAGAAACTaGTCGTTTGAGCTTAGCTTT +
Preference number: 4 (lower is better)
Translates to: RSGKRHVLNLCCCSSKHCELNRN*SFELSF
Trigger: AAAGCTAAGCTCAAACGACCAGTTTCTATTAAGTTC...GCAATGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTTTCCAGATCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp CGATCTGGAAAGAGGCACGTTCTGAATTTGTGTTGTTGCTCGTCCAAACATTGCATCACAAAGTCAGCATaGTGTGATAGATATATACAG +
Preference number: 4 (lower is better)
Translates to: RSGKRHVLNLCCCSSKHCITKSA*CDRYIQ
Trigger: CTGTATATATCTATCACACCATGCTGACTTTGTGAT...GCAATGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTTTCCAGATCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CCA 90 bp CTTGACTATGTACAGCACAATGTTATTCTTGCACTTTCTGGGGTGGTCAGCTGGTGTATTTACTGTTTATaGCTCTCCAGACGTGATAAA +
Preference number: 4 (lower is better)
Translates to: LDYVQHNVILALSGVVSWCIYCL*LSRRDK
Trigger: TTTATCACGTCTGGAGAGCCATAAACAGTAAATACA...CCAGCTGACCACCCCAGAAAGTGCAAGAATAACATTGTGCTGTACATAGTCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR GCA 90 bp CTGGGCATTGATATCCTCTGTATTTACTGTTTATGGCTCTCCAGACGTGATAAACTGAATTTGTGTTGTTaGTCGTCCAAACATTGCACA +
Preference number: 4 (lower is better)
Translates to: LGIDILCIYCLWLSRRDKLNLCC*SSKHCT
Trigger: TGTGCAATGTTTGGACGAGCAACAACACAAATTCAG...TTTATCACGTCTGGAGAGCCATAAACAGTAAATACAGAGGATATCAATGCCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS GCA 90 bp CCTGCAGTGCGGCCTGCGCGGCCTGACCCCGGGCCAGCTTCTTGCTaGGCCCCGAGCCCTCGAACGTCCTGCCGTCCACGCTCACGGCCA +
Preference number: 5 (lower is better)
Translates to: PAVRPARPDPGPASC*APSPRTSCRPRSRP
Trigger: TGGCCGTGAGCGTGGACGGCAGGACGTTCGAGGGCTCGGGGCGCAGCAAGAAGCTGGCCCGGGGTCAGGCCGCGCAGGCCGCACTGCAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS GCA 90 bp GCTCCTGCAGTGCGGCCTGCGCGGCCTGACCCCGGGCCAGCTTCTTaGTGCGCCCCGAGCCCTCGAACGTCCTGCCGTCCACGCTCACGG +
Preference number: 5 (lower is better)
Translates to: APAVRPARPDPGPAS*CAPSPRTSCRPRSR
Trigger: CCGTGAGCGTGGACGGCAGGACGTTCGAGGGCTCGGGGCGCAGCAAGAAGCTGGCCCGGGGTCAGGCCGCGCAGGCCGCACTGCAGGAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS CCA 90 bp GCCCACCTGGCTCTTCCTCAGCATCGCCTCCTGTGGGCGGCCAGGTaGGCAGGTGGGCAGGTGGGCGGCCAGGTGGGCAGGTGGGGCCTC +
Preference number: 5 (lower is better)
Translates to: AHLALPQHRLLWAAR*AGGQVGGQVGRWGL
Trigger: GAGGCCCCACCTGCCCACCTGGCCGCCCACCTGCCCACCTGCCCACCTGGCCGCCCACAGGAGGCGATGCTGAGGAAGAGCCAGGTGGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477140.1
CDS GCA 90 bp GACCCCGGGCCAGCTTCTTGCTGCGCCCCGAGCCCTCGAACGTCCTaGCGTCCACGCTCACGGCCATCACGAAGCTCCGCGCGCGCCGCT +
Preference number: 5 (lower is better)
Translates to: DPGPASCCAPSPRTS*RPRSRPSRSSARAA
Trigger: AGCGGCGCGCGCGGAGCTTCGTGATGGCCGTGAGCGTGGACGGCAGGACGTTCGAGGGCTCGGGGCGCAGCAAGAAGCTGGCCCGGGGTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS CCA 90 bp CTCAGCATCGCCTCCTGTGGGCGGCCAGGTGGGCAGGTGGGCAGGTaGGCGGCCAGGTGGGCAGGTGGGGCCTCTTGGGTGAGCCCAACA +
Preference number: 5 (lower is better)
Translates to: LSIASCGRPGGQVGR*AARWAGGASWVSPT
Trigger: TGTTGGGCTCACCCAAGAGGCCCCACCTGCCCACCTGGCCGCCCACCTGCCCACCTGCCCACCTGGCCGCCCACAGGAGGCGATGCTGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477140.1
CDS GCA 90 bp ACCTCCACCGCTACCGCGAAGACCGGGGCATGCACCGGGCCCGTCTaGGACACTGTCCGGTACTGCAGGCCCGGCCTCAGCTCGTGCAGC +
Preference number: 5 (lower is better)
Translates to: TSTATAKTGACTGPV*DTVRYCRPGLSSCS
Trigger: GCTGCACGAGCTGAGGCCGGGCCTGCAGTACCGGACAGTGTCGCAGACGGGCCCGGTGCATGCCCCGGTCTTCGCGGTAGCGGTGGAGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS GCA 90 bp CTATGGCCACCCCGACTGGCCGGCAGCCTCAGGCCAGGCTGTGTTTaGCCCATGCAGCCACAGCCTGGGGTTGCCGGGCCTTGCTCGGGG +
Preference number: 5 (lower is better)
Translates to: LWPPRLAGSLRPGCV*PMQPQPGVAGPCSG
Trigger: CCCCGAGCAAGGCCCGGCAACCCCAGGCTGTGGCTGCATGGGGCAAACACAGCCTGGCCTGAGGCTGCCGGCCAGTCGGGGTGGCCATAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469464.1
CDS CCA 90 bp AAGTGGGACAGGAGCGCGCCCTGCAGCCCCAGGACGTTCCACCTGTaGGGAGAGCCAGCAGTCAGCGGAGCCCCACCCAGGAGCCCAGGG +
Preference number: 5 (lower is better)
Translates to: KWDRSAPCSPRTFHL*GEPAVSGAPPRSPG
Trigger: CCCTGGGCTCCTGGGTGGGGCTCCGCTGACTGCTGGCTCTCCCCACAGGTGGAACGTCCTGGGGCTGCAGGGCGCGCTCCTGTCCCACTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000477140.1
CDS TCA 90 bp GGCATCTGGATGTCGAACAGCTCCTGCAGTGCGGCCTGCGCGGCCTaGCCCCGGGCCAGCTTCTTGCTGCGCCCCGAGCCCTCGAACGTC +
Preference number: 5 (lower is better)
Translates to: GIWMSNSSCSAACAA*PRASFLLRPEPSNV
Trigger: GACGTTCGAGGGCTCGGGGCGCAGCAAGAAGCTGGCCCGGGGTCAGGCCGCGCAGGCCGCACTGCAGGAGCTGTTCGACATCCAGATGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS GCA 90 bp TCAGCCTGCCATACAGCCGCGCCCACCGTGCAGACAGCACGTGCTTaGAGAGCCGGGATGGGCCCCCACAGCTCCTCCGCCCAGTGGTGG +
Preference number: 5 (lower is better)
Translates to: SACHTAAPTVQTARA*RAGMGPHSSSAQWW
Trigger: CCACCACTGGGCGGAGGAGCTGTGGGGGCCCATCCCGGCTCTGCAAGCACGTGCTGTCTGCACGGTGGGCGCGGCTGTATGGCAGGCTGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381305.1
ENST00000381310.7
ENST00000381312.6
ENST00000474762.5
ENST00000490172.1
CDS GCA 90 bp GTGCTCAGCCTGCCATACAGCCGCGCCCACCGTGCAGACAGCACGTaGTTGCAGAGCCGGGATGGGCCCCCACAGCTCCTCCGCCCAGTG +
Preference number: 5 (lower is better)
Translates to: VLSLPYSRAHRADST*LQSRDGPPQLLRPV
Trigger: CACTGGGCGGAGGAGCTGTGGGGGCCCATCCCGGCTCTGCAAGCACGTGCTGTCTGCACGGTGGGCGCGGCTGTATGGCAGGCTGAGCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381305.1
ENST00000381310.7
ENST00000381312.6
ENST00000474762.5
ENST00000490172.1
CDS GCA 90 bp AACGTGAGCCCGTTCACCTCCACCGCTACCGCGAAGACCGGGGCATaGACCGGGCCCGTCTGCGACACTGTCCGGTACTGCAGGCCCGGC +
Preference number: 5 (lower is better)
Translates to: NVSPFTSTATAKTGA*TGPVCDTVRYCRPG
Trigger: GCCGGGCCTGCAGTACCGGACAGTGTCGCAGACGGGCCCGGTGCATGCCCCGGTCTTCGCGGTAGCGGTGGAGGTGAACGGGCTCACGTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS CCA 90 bp GCGAATTCCTGCGGCATTGGCGTCCTCCTGGCCCTGCCGGGCGCGTaGCCGGGCATCTGGATGTCGAACAGCTCCTGCAGTGCGGCCTGC +
Preference number: 5 (lower is better)
Translates to: ANSCGIGVLLALPGA*PGIWMSNSSCSAAC
Trigger: GCAGGCCGCACTGCAGGAGCTGTTCGACATCCAGATGCCCGGCCACGCGCCCGGCAGGGCCAGGAGGACGCCAATGCCGCAGGAATTCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS GCA 90 bp CCCTCCATGCGGTGGCTCATGACGCGTGCGAGGTGGCCCGTGTGGTaGAGGCTGCCCACCACGATGCTCTGCAGGTACACGGGCTCCACG +
Preference number: 5 (lower is better)
Translates to: PSMRWLMTRARWPVW*RLPTTMLCRYTGST
Trigger: CGTGGAGCCCGTGTACCTGCAGAGCATCGTGGTGGGCAGCCTGCACCACACGGGCCACCTCGCACGCGTCATGAGCCACCGCATGGAGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381305.1
ENST00000381310.7
ENST00000381312.6
ENST00000477140.1
CDS GCA 90 bp GCTGGGTGTCCGTGTGCTCAGCCTGCCATACAGCCGCGCCCACCGTaGAGACAGCACGTGCTTGCAGAGCCGGGATGGGCCCCCACAGCT +
Preference number: 5 (lower is better)
Translates to: AGCPCAQPAIQPRPP*RQHVLAEPGWAPTA
Trigger: AGCTGTGGGGGCCCATCCCGGCTCTGCAAGCACGTGCTGTCTGCACGGTGGGCGCGGCTGTATGGCAGGCTGAGCACACGGACACCCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381305.1
ENST00000381310.7
ENST00000381312.6
ENST00000474762.5
ENST00000490172.1
CDS GCA 90 bp AAGACCGGGGCATGCACCGGGCCCGTCTGCGACACTGTCCGGTACTaGAGGCCCGGCCTCAGCTCGTGCAGCTGCACCAGCGCGTTCTTG +
Preference number: 5 (lower is better)
Translates to: KTGACTGPVCDTVRY*RPGLSSCSCTSAFL
Trigger: CAAGAACGCGCTGGTGCAGCTGCACGAGCTGAGGCCGGGCCTGCAGTACCGGACAGTGTCGCAGACGGGCCCGGTGCATGCCCCGGTCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS CCA 90 bp TCCTGTGGGCGGCCAGGTGGGCAGGTGGGCAGGTGGGCGGCCAGGTaGGCAGGTGGGGCCTCTTGGGTGAGCCCAACACTAGTGATTCTG +
Preference number: 5 (lower is better)
Translates to: SCGRPGGQVGRWAAR*AGGASWVSPTLVIL
Trigger: CAGAATCACTAGTGTTGGGCTCACCCAAGAGGCCCCACCTGCCCACCTGGCCGCCCACCTGCCCACCTGCCCACCTGGCCGCCCACAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477140.1
CDS GCA 90 bp CTCTGCAGGTACACGGGCTCCACGAAGTGGGACAGGAGCGCGCCCTaGAGCCCCAGGACGTTCCACCTGTGGGGAGAGCCAGCAGTCAGC +
Preference number: 5 (lower is better)
Translates to: LCRYTGSTKWDRSAP*SPRTFHLWGEPAVS
Trigger: GCTGACTGCTGGCTCTCCCCACAGGTGGAACGTCCTGGGGCTGCAGGGCGCGCTCCTGTCCCACTTCGTGGAGCCCGTGTACCTGCAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000477140.1
CDS GCA 90 bp CAGGTGCGCCTGGCAGGCGTTGGGGAACTGCACGAAGGACCTGAGTaGCAGCTCCGCCGCGCGCATCTTGGCCTTCTTCTTGGTGGGGCC +
Preference number: 5 (lower is better)
Translates to: QVRLAGVGELHEGPE*QLRRAHLGLLLGGA
Trigger: GGCCCCACCAAGAAGAAGGCCAAGATGCGCGCGGCGGAGCTGGCACTCAGGTCCTTCGTGCAGTTCCCCAACGCCTGCCAGGCGCACCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS GCA 90 bp TGGGCAGAGCAGCTCAGGAGCTTGGGGCGTGGCAGCGACTGGAGGTaGTGGGAGGGAGGCGGGTGCCCATTCTGCAGCTTCCTGCTCCTC +
Preference number: 5 (lower is better)
Translates to: WAEQLRSLGRGSDWR*WEGGGCPFCSFLLL
Trigger: GAGGAGCAGGAAGCTGCAGAATGGGCACCCGCCTCCCTCCCAGCACCTCCAGTCGCTGCCACGCCCCAAGCTCCTGAGCTGCTCTGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469464.1
CDS TCA 90 bp TGGCCAGGTGCGCCTGGCAGGCGTTGGGGAACTGCACGAAGGACCTaGGTGCCAGCTCCGCCGCGCGCATCTTGGCCTTCTTCTTGGTGG +
Preference number: 5 (lower is better)
Translates to: WPGAPGRRWGTARRT*VPAPPRASWPSSWW
Trigger: CCACCAAGAAGAAGGCCAAGATGCGCGCGGCGGAGCTGGCACTCAGGTCCTTCGTGCAGTTCCCCAACGCCTGCCAGGCGCACCTGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS CCA 90 bp AGGTCTTGGGCAGAGCAGCTCAGGAGCTTGGGGCGTGGCAGCGACTaGAGGTGCTGGGAGGGAGGCGGGTGCCCATTCTGCAGCTTCCTG +
Preference number: 5 (lower is better)
Translates to: RSWAEQLRSLGRGSD*RCWEGGGCPFCSFL
Trigger: CAGGAAGCTGCAGAATGGGCACCCGCCTCCCTCCCAGCACCTCCAGTCGCTGCCACGCCCCAAGCTCCTGAGCTGCTCTGCCCAAGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469464.1
CDS GCA 90 bp GCGTTCTTGGGCGCCACCGACCACGACAGCTTCTTCCAGACCAGCTaGAGTTTGCACAAGTGGCCCCCATTCCCCTCCTCCAGCGGCCGC +
Preference number: 5 (lower is better)
Translates to: AFLGATDHDSFFQTS*SLHKWPPFPSSSGR
Trigger: GCGGCCGCTGGAGGAGGGGAATGGGGGCCACTTGTGCAAACTGCAGCTGGTCTGGAAGAAGCTGTCGTGGTCGGTGGCGCCCAAGAACGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS GCA 90 bp TGCTCGCCGCTGATGCACTTGGTCCCCGAGGACAGGGCCACGACCTaGGCCTGCCGAGCATCCAGGCCTTTGGTCATGACGATTCCTGCC +
Preference number: 5 (lower is better)
Translates to: CSPLMHLVPEDRATT*ACRASRPLVMTIPA
Trigger: GGCAGGAATCGTCATGACCAAAGGCCTGGATGCTCGGCAGGCGCAGGTCGTGGCCCTGTCCTCGGGGACCAAGTGCATCAGCGGCGAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS GCA 90 bp CGCACGGGGACCGTCCCTTCCCCGGACTCGATCTTGGTGCGCAGGTaGCCGCGGAACTTCCTGACGAGGTGTTTGCTGCTGTGCAGGTCT +
Preference number: 5 (lower is better)
Translates to: RTGTVPSPDSILVRR*PRNFLTRCLLLCRS
Trigger: AGACCTGCACAGCAGCAAACACCTCGTCAGGAAGTTCCGCGGGCACCTGCGCACCAAGATCGAGTCCGGGGAAGGGACGGTCCCCGTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381312.6
ENST00000469464.1
CDS CCA 90 bp CGGCCTGGTCCTGAGGACCTGTCAGTCTTCCCATCGTGCGGACCTTaGGGAGCTCCCTGGGAGTGCCCCAGACCCAACCCAGCCATCACT +
Preference number: 5 (lower is better)
Translates to: RPGPEDLSVFPSCGP*GAPWECPRPNPAIT
Trigger: AGTGATGGCTGGGTTGGGTCTGGGGCACTCCCAGGGAGCTCCCCAAGGTCCGCACGATGGGAAGACTGACAGGTCCTCAGGACCAGGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000477140.1
CDS CCA 90 bp ACTGCAGGCCCGGCCTCAGCTCGTGCAGCTGCACCAGCGCGTTCTTaGGCGCCACCGACCACGACAGCTTCTTCCAGACCAGCTGCAGTT +
Preference number: 5 (lower is better)
Translates to: TAGPASARAAAPARS*APPTTTASSRPAAV
Trigger: AACTGCAGCTGGTCTGGAAGAAGCTGTCGTGGTCGGTGGCGCCCAAGAACGCGCTGGTGCAGCTGCACGAGCTGAGGCCGGGCCTGCAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CAA 90 bp ACTCCACAGGAAGAGTCGGCGCTAACTCAACAGTGCATGTGCCCCTGGGTGTGGGGCCGCGCGGCCAGGTaGCCCACGTTGCGGTTCTCC +
Preference number: 5 (lower is better)
Translates to: TPQEESALTQQCMCPWVWGRAAR*PTLRFS
Trigger: GGAGAACCGCAACGTGGGCAACCTGGCCGCGCGGCC...CCACACCCAGGGGCACATGCACTGTTGAGTTAGCGCCGACTCTTCCTGTGGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CAA 90 bp AGGAGCTGGCCGTGCTCCCACGCATTCAGGGGAGCGCTCACTTCTGACTGCTGCTGCGCCTGGCAGGCGTaGGGGAACTGCACGAAGGAC +
Preference number: 5 (lower is better)
Translates to: RSWPCSHAFRGALTSDCCCAWQA*GNCTKD
Trigger: GTCCTTCGTGCAGTTCCCCAACGCCTGCCAGGCGCA...GCAGCAGTCAGAAGTGAGCGCTCCCCTGAATGCGTGGGAGCACGGCCAGCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS GCA 90 bp ATATGGAGTCTGCGAATTCCTGCGGCATTGGCGTCCTCCTGGCCCTaGCGGGCGCGTGGCCGGGCATCTGGATGTCGAACAGCTCCTGCA +
Preference number: 5 (lower is better)
Translates to: IWSLRIPAALASSWP*RARGRASGCRTAPA
Trigger: TGCAGGAGCTGTTCGACATCCAGATGCCCGGCCACGCGCCCGGCAGGGCCAGGAGGACGCCAATGCCGCAGGAATTCGCAGACTCCATAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS GCA 90 bp TGCTGGGAGGGAGGCGGGTGCCCATTCTGCAGCTTCCTGCTCCTCTaGACAGAGCTCAGCCGAGGCCTCTCATCCCGAGACCTCCACATG +
Preference number: 5 (lower is better)
Translates to: CWEGGGCPFCSFLLL*TELSRGLSSRDLHM
Trigger: CATGTGGAGGTCTCGGGATGAGAGGCCTCGGCTGAGCTCTGTGCAGAGGAGCAGGAAGCTGCAGAATGGGCACCCGCCTCCCTCCCAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469464.1
CDS TCA 90 bp TGCTCCCTCAGGGACTCGGGGTGCCTTGGCCTCAGGGTGTGGGACTaGACATGTGGAATGGCTGTGGAGTTCCACGGCTCAGGCACAGGG +
Preference number: 5 (lower is better)
Translates to: CSLRDSGCLGLRVWD*TCGMAVEFHGSGTG
Trigger: CCCTGTGCCTGAGCCGTGGAACTCCACAGCCATTCCACATGTTCAGTCCCACACCCTGAGGCCAAGGCACCCCGAGTCCCTGAGGGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469464.1
CDS CCA 90 bp CGAGCATCCAGGCCTTTGGTCATGACGATTCCTGCCAGCGCTTTATaGCGGGCGTGCATGGGCGTGAGGTCCGTCGTCACCTCGCGGAAC +
Preference number: 5 (lower is better)
Translates to: RASRPLVMTIPASAL*RACMGVRSVVTSRN
Trigger: GTTCCGCGAGGTGACGACGGACCTCACGCCCATGCACGCCCGCCATAAAGCGCTGGCAGGAATCGTCATGACCAAAGGCCTGGATGCTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS CCA 90 bp GGTGCCTTGGCCTCAGGGTGTGGGACTGAACATGTGGAATGGCTGTaGAGTTCCACGGCTCAGGCACAGGGCCCTGACCGCATGTGCCCA +
Preference number: 5 (lower is better)
Translates to: GALASGCGTEHVEWL*SSTAQAQGPDRMCP
Trigger: TGGGCACATGCGGTCAGGGCCCTGTGCCTGAGCCGTGGAACTCCACAGCCATTCCACATGTTCAGTCCCACACCCTGAGGCCAAGGCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469464.1
CDS CCA 90 bp ACTCGGGGTGCCTTGGCCTCAGGGTGTGGGACTGAACATGTGGAATaGCTGTGGAGTTCCACGGCTCAGGCACAGGGCCCTGACCGCATG +
Preference number: 5 (lower is better)
Translates to: TRGALASGCGTEHVE*LWSSTAQAQGPDRM
Trigger: CATGCGGTCAGGGCCCTGTGCCTGAGCCGTGGAACTCCACAGCCATTCCACATGTTCAGTCCCACACCCTGAGGCCAAGGCACCCCGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469464.1
CDS-3UTR CAA 90 bp TTCTGGGACACCAAAGTAAAACGAATGCAGGGAACCGGCCGACCCGCCACGTCGCCCATCGTGCGGACCTaGGGGAGCTCCCTGGGAGTG +
Preference number: 5 (lower is better)
Translates to: FWDTKVKRMQGTGRPATSPIVRT*GSSLGV
Trigger: CACTCCCAGGGAGCTCCCCAAGGTCCGCACGATGGG...CGACGTGGCGGGTCGGCCGGTTCCCTGCATTCGTTTTACTTTGGTGTCCCAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381310.7
CDS-3UTR CAA 90 bp ACAGGAAGAGTCGGCGCTAACTCAACAGTGCATGTGCCCCTGGGTGTGGGGGACGTGTGCGCCCCCAGCTaGGCCTCACAGTACATGGAG +
Preference number: 5 (lower is better)
Translates to: TGRVGANSTVHVPLGVGDVCAPS*ASQYME
Trigger: CTCCATGTACTGTGAGGCCAAGCTGGGGGCGCACAC...GTCCCCCACACCCAGGGGCACATGCACTGTTGAGTTAGCGCCGACTCTTCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR CAA 90 bp ACAGGAAGAGTCGGCGCTAACTCAACAGTGCATGTGCCCCTGGGTGTGGGGGACGTCTTGCCCCCTCACTaGGAGGGGAATGGGTGGCCA +
Preference number: 5 (lower is better)
Translates to: TGRVGANSTVHVPLGVGDVLPPH*EGNGWP
Trigger: TGGCCACCCATTCCCCTCCAAGTGAGGGGGCAAGAC...GTCCCCCACACCCAGGGGCACATGCACTGTTGAGTTAGCGCCGACTCTTCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS GCA 90 bp AGGCCTTTGGTCATGACGATTCCTGCCAGCGCTTTATGGCGGGCGTaGATGGGCGTGAGGTCCGTCGTCACCTCGCGGAACTTCTGTGTG +
Preference number: 5 (lower is better)
Translates to: RPLVMTIPASALWRA*MGVRSVVTSRNFCV
Trigger: CACACAGAAGTTCCGCGAGGTGACGACGGACCTCACGCCCATGCACGCCCGCCATAAAGCGCTGGCAGGAATCGTCATGACCAAAGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS CCA 90 bp GGCGTGAGGTCCGTCGTCACCTCGCGGAACTTCTGTGTGACCAGCTaGGATATGGAGTCTGCGAATTCCTGCGGCATTGGCGTCCTCCTG +
Preference number: 5 (lower is better)
Translates to: GVRSVVTSRNFCVTS*DMESANSCGIGVLL
Trigger: CAGGAGGACGCCAATGCCGCAGGAATTCGCAGACTCCATATCCCAGCTGGTCACACAGAAGTTCCGCGAGGTGACGACGGACCTCACGCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CAA 90 bp CGTGTAGGGTCACCCTTGACTGCCTCGACTACCTTCTCCTTTCACTACCCAGGGTCCGCCGCGCGCATCTaGGCCTTCTTCTTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: RVGSPLTASTTFSFHYPGSAARI*AFFLVG
Trigger: CCCCACCAAGAAGAAGGCCAAGATGCGCGCGGCGGA...CCCTGGGTAGTGAAAGGAGAAGGTAGTCGAGGCAGTCAAGGGTGACCCTACACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS TCA 90 bp ACATGTGGAATGGCTGTGGAGTTCCACGGCTCAGGCACAGGGCCCTaGCCGCATGTGCCCAGCATCACTGACCTCACCAGAAGTGGGATG +
Preference number: 5 (lower is better)
Translates to: TCGMAVEFHGSGTGP*PHVPSITDLTRSGM
Trigger: CATCCCACTTCTGGTGAGGTCAGTGATGCTGGGCACATGCGGTCAGGGCCCTGTGCCTGAGCCGTGGAACTCCACAGCCATTCCACATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469464.1
CDS-3UTR CAA 90 bp CCAGCGATCTGGAAAGAGGCACGTTCTGAATTTGTGTTGTTGCTCGTCCAAACACCCCGGGCCAGCTTCTaGCTGCGCCCCGAGCCCTCG +
Preference number: 5 (lower is better)
Translates to: PAIWKEARSEFVLLLVQTPRASF*LRPEPS
Trigger: CGAGGGCTCGGGGCGCAGCAAGAAGCTGGCCCGGGG...TGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTTTCCAGATCGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CAA 90 bp TTCTGGGACACCAAAGTAAAACGAATGCAGGGAACCGGCCGACCCGCCACGTCGTCCCCTACTTGTGTCTaGCCCCCTCACTTGGAGGGG +
Preference number: 5 (lower is better)
Translates to: FWDTKVKRMQGTGRPATSSPTCV*PPHLEG
Trigger: CCCCTCCAAGTGAGGGGGCAAGACACAAGTAGGGGA...CGACGTGGCGGGTCGGCCGGTTCCCTGCATTCGTTTTACTTTGGTGTCCCAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CAA 90 bp CTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCAAGAGGCGCTGCGAAGCTTGAGGTaGCAAACCCGGGAGCGGCTC +
Preference number: 5 (lower is better)
Translates to: LIFMCPLKLVRPQHHQEALRSLR*QTRERL
Trigger: GAGCCGCTCCCGGGTTTGCAACCTCAAGCTTCGCAG...CGCCTCTTGGTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CAA 90 bp AAAGCCCCCATGTCCCATCTCCACTGTGAGCTGAAGGTCTCTGGTGTTGGAAGCCCGCTGCTGCGAAGCTaGAGGTTGCAAACCCGGGAG +
Preference number: 5 (lower is better)
Translates to: KAPMSHLHCELKVSGVGSPLLRS*RLQTRE
Trigger: CTCCCGGGTTTGCAACCTCAAGCTTCGCAGCAGCGG...GCTTCCAACACCAGAGACCTTCAGCTCACAGTGGAGATGGGACATGGGGGCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CAA 90 bp CTCTCACCAGGGTTTGATCTGTCTGCGGTTCCCGCAGGAGTGATATTGTTTGGTTGCACCAGCGCGTTCTaGGGCGCCACCGACCACGAC +
Preference number: 5 (lower is better)
Translates to: LSPGFDLSAVPAGVILFGCTSAF*GATDHD
Trigger: GTCGTGGTCGGTGGCGCCCAAGAACGCGCTGGTGCA...ACCAAACAATATCACTCCTGCGGGAACCGCAGACAGATCAAACCCTGGTGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CAA 90 bp TTTGTGGCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCAGAGTCCTCGCGCCGCTaGCTCAGGTGCAGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: FVAYLHVPPQASETPASPESSRR*LRCSSS
Trigger: GCTGGAGCTGCACCTGAGCAAGCGGCGCGAGGACTC...TGGTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGCCACAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CAA 90 bp ACTCCACAGGAAGAGTCGGCGCTAACTCAACAGTGCATGTGCCCCTGGGTGTGGTCCTCTCACCAGGGTTaGATCTGTCTGCGGTTCCCG +
Preference number: 5 (lower is better)
Translates to: TPQEESALTQQCMCPWVWSSHQG*ICLRFP
Trigger: CGGGAACCGCAGACAGATCAAACCCTGGTGAGAGGA...CCACACCCAGGGGCACATGCACTGTTGAGTTAGCGCCGACTCTTCCTGTGGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CAA 90 bp GCGTGCCTCCTGCGTGTAGGGTCACCCTTGACTGCCTCGACTACCTTCTCCTTTTTCCTGACGAGGTGTTaGCTGCTGTGCAGGTCTGTG +
Preference number: 5 (lower is better)
Translates to: ACLLRVGSPLTASTTFSFFLTRC*LLCRSV
Trigger: CACAGACCTGCACAGCAGCAAACACCTCGTCAGGAA...AAAGGAGAAGGTAGTCGAGGCAGTCAAGGGTGACCCTACACGCAGGAGGCACGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CAA 90 bp CTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCAAGAGGCGAGGCGAGGACAGGCTTaGGAGGTATGTGGGATGGCG +
Preference number: 5 (lower is better)
Translates to: LIFMCPLKLVRPQHHQEARRGQA*EVCGMA
Trigger: CGCCATCCCACATACCTCCAAAGCCTGTCCTCGCCT...CGCCTCTTGGTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CAA 90 bp TTTGTGGCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCACGCCCAGTGGTGGCGTaGATAATCTCCAGGTCCGCG +
Preference number: 5 (lower is better)
Translates to: FVAYLHVPPQASETPASPRPVVA*IISRSA
Trigger: CGCGGACCTGGAGATTATCAACGCCACCACTGGGCG...TGGTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGCCACAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR CAA 90 bp CATTTGTGGCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACGTGTGCGCCCCCAGCTaGGCCTCACAGTACATGGAG +
Preference number: 5 (lower is better)
Translates to: HLWLIFMCPLKLVRPQHHVCAPS*ASQYME
Trigger: CTCCATGTACTGTGAGGCCAAGCTGGGGGCGCACAC...GTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGCCACAAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR CAA 90 bp TCACCAGGGTTTGATCTGTCTGCGGTTCCCGCAGGAGTGATATTGTTTGGTGTGGCCAGGTTGCCCACGTaGCGGTTCTCCTTCACCTCC +
Preference number: 5 (lower is better)
Translates to: SPGFDLSAVPAGVILFGVARLPT*RFSFTS
Trigger: GGAGGTGAAGGAGAACCGCAACGTGGGCAACCTGGC...CACACCAAACAATATCACTCCTGCGGGAACCGCAGACAGATCAAACCCTGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CAA 90 bp GCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCAAGAGGCCGAGCATCCAGGCCTTaGGTCATGACGATTCCTGCC +
Preference number: 5 (lower is better)
Translates to: AYLHVPPQASETPASPRGRASRP*VMTIPA
Trigger: GGCAGGAATCGTCATGACCAAAGGCCTGGATGCTCG...GCCTCTTGGTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CAA 90 bp TTTGTGGCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCAAGGGAGAGTGGAGTCTaGCGTCTCCACAGGGGGAGG +
Preference number: 5 (lower is better)
Translates to: FVAYLHVPPQASETPASPRESGV*RLHRGR
Trigger: CCTCCCCCTGTGGAGACGCAAGACTCCACTCTCCCT...TGGTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGCCACAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CAA 90 bp CTTGACTATGTACAGCACAATGTTATTCTTGCACTTTCTGGGGTGGTCAGCTGGTCCCCGGACTCGATCTaGGTGCGCAGGTGCCCGCGG +
Preference number: 5 (lower is better)
Translates to: LDYVQHNVILALSGVVSWSPDSI*VRRCPR
Trigger: CCGCGGGCACCTGCGCACCAAGATCGAGTCCGGGGA...CCAGCTGACCACCCCAGAAAGTGCAAGAATAACATTGTGCTGTACATAGTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS TCA 90 bp CGAAGCTTGAGGTTGCAAACCCGGGAGCGGCTCACTTTTCAGGACTaGGCAGGAAAGCGCGCTCCGTCTCTCTGTCTCTCGAATTGTTCT +
Preference number: 5 (lower is better)
Translates to: RSLRLQTRERLTFQD*AGKRAPSLCLSNCS
Trigger: AGAACAATTCGAGAGACAGAGAGACGGAGCGCGCTTTCCTGCTCAGTCCTGAAAAGTGAGCCGCTCCCGGGTTTGCAACCTCAAGCTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CAA 90 bp AAGAGGCACGTTCTGAATTTGTGTTGTTGCTCGTCCAAACATTGCACACTCGCGGCTCTGGGGACACTGTaGCCTGGGACTGGGCTCCAC +
Preference number: 5 (lower is better)
Translates to: KRHVLNLCCCSSKHCTLAALGTL*PGTGLH
Trigger: GTGGAGCCCAGTCCCAGGCAACAGTGTCCCCAGAGC...CGCGAGTGTGCAATGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381310.7
CDS-3UTR CAA 90 bp CGATCTGGAAAGAGGCACGTTCTGAATTTGTGTTGTTGCTCGTCCAAACATTGCGCAGACAGCACGTGCTaGCAGAGCCGGGATGGGCCC +
Preference number: 5 (lower is better)
Translates to: RSGKRHVLNLCCCSSKHCADSTC*QSRDGP
Trigger: GGGCCCATCCCGGCTCTGCAAGCACGTGCTGTCTGC...GCAATGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTTTCCAGATCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR CAA 90 bp TTCTGGGACACCAAAGTAAAACGAATGCAGGGAACCGGCCGACCCGCCACGTCGTGCCTCGCAGGGGTTTaGGAAACTGTTCCTTCACTT +
Preference number: 5 (lower is better)
Translates to: FWDTKVKRMQGTGRPATSCLAGV*ETVPSL
Trigger: AAGTGAAGGAACAGTTTCCAAAACCCCTGCGAGGCA...CGACGTGGCGGGTCGGCCGGTTCCCTGCATTCGTTTTACTTTGGTGTCCCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR CAA 90 bp CCAGCGATCTGGAAAGAGGCACGTTCTGAATTTGTGTTGTTGCTCGTCCAAACACGAATTCCTGCGGCATaGGCGTCCTCCTGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: PAIWKEARSEFVLLLVQTRIPAA*ASSWPC
Trigger: GCAGGGCCAGGAGGACGCCAATGCCGCAGGAATTCG...TGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTTTCCAGATCGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CAA 90 bp TCTTCATTTGTGGCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCTGAAGCAAGGGGCTaGGCGGTGTCAGGTGGTGGG +
Preference number: 5 (lower is better)
Translates to: SSFVAYLHVPPQASETPASEARG*AVSGGG
Trigger: CCCACCACCTGACACCGCCAAGCCCCTTGCTTCAGA...TGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGCCACAAATGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CAA 90 bp ACGGAAAGGCTCCGGCACCTCAACCTCACTCTGGCTGCATTGGAAACTCTTCTGATTTGTGGGAGAAGTTaGACGGGTCACCAGCAGCCC +
Preference number: 5 (lower is better)
Translates to: TERLRHLNLTLAALETLLICGRS*TGHQQP
Trigger: GGGCTGCTGGTGACCCGTCAAACTTCTCCCACAAAT...CAGAAGAGTTTCCAATGCAGCCAGAGTGAGGTTGAGGTGCCGGAGCCTTTCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CAA 90 bp CTGCAGAAACAGCGTGATTTGGAGCCCACTGGGACAAAGCATTATATGCTTCTCCGCCCAGTGGTGGCGTaGATAATCTCCAGGTCCGCG +
Preference number: 5 (lower is better)
Translates to: LQKQRDLEPTGTKHYMLLRPVVA*IISRSA
Trigger: CGCGGACCTGGAGATTATCAACGCCACCACTGGGCG...GAGAAGCATATAATGCTTTGTCCCAGTGGGCTCCAAATCACGCTGTTTCTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CAA 90 bp TGTCGGTGCCTCCTTCCAAGGCTGCAGCTAAAACCCCTTTGCCTGAATGGAGCCTGCCTCGCAGGGGTTTaGGAAACTGTTCCTTCACTT +
Preference number: 5 (lower is better)
Translates to: CRCLLPRLQLKPLCLNGACLAGV*ETVPSL
Trigger: AAGTGAAGGAACAGTTTCCAAAACCCCTGCGAGGCA...GGCTCCATTCAGGCAAAGGGGTTTTAGCTGCAGCCTTGGAAGGAGGCACCGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR CAA 90 bp TCACCAGGGTTTGATCTGTCTGCGGTTCCCGCAGGAGTGATATTGTTTGGTGTGCAGACCAGCTGCAGTTaGCACAAGTGGCCCCCATTC +
Preference number: 5 (lower is better)
Translates to: SPGFDLSAVPAGVILFGVQTSCS*HKWPPF
Trigger: GAATGGGGGCCACTTGTGCAAACTGCAGCTGGTCTG...CACACCAAACAATATCACTCCTGCGGGAACCGCAGACAGATCAAACCCTGGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CAA 90 bp TCACCAGGGTTTGATCTGTCTGCGGTTCCCGCAGGAGTGATATTGTTTGGTGTGTTCCACCTGGCGATCTaGTCCGTGCAGGACATGGTG +
Preference number: 5 (lower is better)
Translates to: SPGFDLSAVPAGVILFGVFHLAI*SVQDMV
Trigger: CACCATGTCCTGCACGGACAAGATCGCCAGGTGGAA...CACACCAAACAATATCACTCCTGCGGGAACCGCAGACAGATCAAACCCTGGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CAA 90 bp CGTGTAGGGTCACCCTTGACTGCCTCGACTACCTTCTCCTTTCACTACCCAGGGCTCACTCTGGCTGCATaGGAAACTCTTCTGTCGCTA +
Preference number: 5 (lower is better)
Translates to: RVGSPLTASTTFSFHYPGLTLAA*ETLLSL
Trigger: TAGCGACAGAAGAGTTTCCAATGCAGCCAGAGTGAG...CCCTGGGTAGTGAAAGGAGAAGGTAGTCGAGGCAGTCAAGGGTGACCCTACACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CAA 90 bp GCGTGCCTCCTGCGTGTAGGGTCACCCTTGACTGCCTCGACTACCTTCTCCTTTTCTCGGATTCAGAATTaGTGGGAGAAGTTTGACGGG +
Preference number: 5 (lower is better)
Translates to: ACLLRVGSPLTASTTFSFSRIQN*WEKFDG
Trigger: CCCGTCAAACTTCTCCCACAAATTCTGAATCCGAGA...AAAGGAGAAGGTAGTCGAGGCAGTCAAGGGTGACCCTACACGCAGGAGGCACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CAA 90 bp CTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCAAGAGGCGCCAGGTGATCTCGCCTaGGTGTTTAGGGAATGCTCA +
Preference number: 5 (lower is better)
Translates to: LIFMCPLKLVRPQHHQEAPGDLA*VFRECS
Trigger: TGAGCATTCCCTAAACACCAAGGCGAGATCACCTGG...CGCCTCTTGGTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS TCA 90 bp AGCTCAGCCGAGGCCTCTCATCCCGAGACCTCCACATGGAGGCTTTaGAAACTCCATCCAAGAAGACAATATCTCGGGATGGTAGGGGAA +
Preference number: 5 (lower is better)
Translates to: SSAEASHPETSTWRL*KLHPRRQYLGMVGE
Trigger: TTCCCCTACCATCCCGAGATATTGTCTTCTTGGATGGAGTTTTCAAAGCCTCCATGTGGAGGTCTCGGGATGAGAGGCCTCGGCTGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469464.1
CDS-3UTR CAA 90 bp GGAAAGGCTCCGGCACCTCAACCTCACTCTGGCTGCATTGGAAACTCTTCTGTCTATGAATACAGCGCCTaGGCTCTCAGGGATGATGCT +
Preference number: 5 (lower is better)
Translates to: GKAPAPQPHSGCIGNSSVYEYSA*ALRDDA
Trigger: AGCATCATCCCTGAGAGCCAAGGCGCTGTATTCATA...GACAGAAGAGTTTCCAATGCAGCCAGAGTGAGGTTGAGGTGCCGGAGCCTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CAA 90 bp TGTCGGTGCCTCCTTCCAAGGCTGCAGCTAAAACCCCTTTGCCTGAATGGAGCCAGGCACGTTCTGAATTaGTGTTGTTGCTCGTCCAAA +
Preference number: 5 (lower is better)
Translates to: CRCLLPRLQLKPLCLNGARHVLN*CCCSSK
Trigger: TTTGGACGAGCAACAACACAAATTCAGAACGTGCCT...GGCTCCATTCAGGCAAAGGGGTTTTAGCTGCAGCCTTGGAAGGAGGCACCGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR CAA 90 bp GCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCAAGAGGCAATAGAGGATTCTTATaGGTTTCTCTGGGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: AYLHVPPQASETPASPRGNRGFL*VSLGLG
Trigger: CCCCAGCCCCAGAGAAACCAATAAGAATCCTCTATT...GCCTCTTGGTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR CAA 90 bp AAGAGGCACGTTCTGAATTTGTGTTGTTGCTCGTCCAAACATTGCACACTCGCGCGTGTAGGGTCACCCTaGACTGCCTCGACTACCTTC +
Preference number: 5 (lower is better)
Translates to: KRHVLNLCCCSSKHCTLARVGSP*TASTTF
Trigger: GAAGGTAGTCGAGGCAGTCAAGGGTGACCCTACACG...CGCGAGTGTGCAATGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CAA 90 bp GCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCAAGAGGCCCAGACACTAACTTTTaGACTAAGAACCAGGCCGGA +
Preference number: 5 (lower is better)
Translates to: AYLHVPPQASETPASPRGPDTNF*TKNQAG
Trigger: TCCGGCCTGGTTCTTAGTCAAAAAGTTAGTGTCTGG...GCCTCTTGGTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CAA 90 bp CGATCTGGAAAGAGGCACGTTCTGAATTTGTGTTGTTGCTCGTCCAAACATTGCCCTCACCGGGTTCTGTaGGGTGTTATGAGAGGCGGC +
Preference number: 5 (lower is better)
Translates to: RSGKRHVLNLCCCSSKHCPHRVL*GVMRGG
Trigger: GCCGCCTCTCATAACACCCAACAGAACCCGGTGAGG...GCAATGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTTTCCAGATCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CAA 90 bp CACGTCACAGGTCTTAACTCTGCCTCGCAGGGGTTTTGGAAACTGTTCCTTCACTTGCTCGTCCAAACATaGCACACTCGCGTGTTTCTG +
Preference number: 5 (lower is better)
Translates to: HVTGLNSASQGFWKLFLHLLVQT*HTRVFL
Trigger: CAGAAACACGCGAGTGTGCAATGTTTGGACGAGCAA...GTGAAGGAACAGTTTCCAAAACCCCTGCGAGGCAGAGTTAAGACCTGTGACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR CAA 90 bp GCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCAAGAGGCTCTCTGTCTCTCGAATaGTTCTCTATGACTTGCTCC +
Preference number: 5 (lower is better)
Translates to: AYLHVPPQASETPASPRGSLSLE*FSMTCS
Trigger: GGAGCAAGTCATAGAGAACAATTCGAGAGACAGAGA...GCCTCTTGGTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CAA 90 bp GACACTAACTTTTTGACTAAGAACCAGGCCGGAAACCACATTGCTGATCTTCCTATCTTGGCCTTCTTCTaGGTGGGGCCTGTGCCCTCG +
Preference number: 5 (lower is better)
Translates to: DTNFLTKNQAGNHIADLPILAFF*VGPVPS
Trigger: CGAGGGCACAGGCCCCACCAAGAAGAAGGCCAAGAT...AGGAAGATCAGCAATGTGGTTTCCGGCCTGGTTCTTAGTCAAAAAGTTAGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS TCA 90 bp GTTTGTGATGCCAGGACTCAGGTGCTTGAAAGGAGCGAGGAAGGTTaGCAATATGCTTACTTTATCTTTCCGCTTGGACCTCCGCCTCCT +
Preference number: 5 (lower is better)
Translates to: VCDARTQVLERSEEG*QYAYFIFPLGPPPP
Trigger: AGGAGGCGGAGGTCCAAGCGGAAAGATAAAGTAAGCATATTGTCAACCTTCCTCGCTCCTTTCAAGCACCTGAGTCCTGGCATCACAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CAA 90 bp TCGTCCAAACATTGCACACTCGCGTGTTTCTGGGACACCAAAGTAAAACGAATGATTGTTCTCTATGACTaGCTCCCACTGGGCTGGGGG +
Preference number: 5 (lower is better)
Translates to: SSKHCTLACFWDTKVKRMIVLYD*LPLGWG
Trigger: CCCCCAGCCCAGTGGGAGCAAGTCATAGAGAACAAT...CATTCGTTTTACTTTGGTGTCCCAGAAACACGCGAGTGTGCAATGTTTGGACGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CAA 90 bp CGATCTGGAAAGAGGCACGTTCTGAATTTGTGTTGTTGCTCGTCCAAACATTGCACTTTATCTTTCCGCTaGGACCTCCGCCTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: RSGKRHVLNLCCCSSKHCTLSFR*DLRLLL
Trigger: GAGGAGGAGGCGGAGGTCCAAGCGGAAAGATAAAGT...GCAATGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTTTCCAGATCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CAA 90 bp CGATCTGGAAAGAGGCACGTTCTGAATTTGTGTTGTTGCTCGTCCAAACATTGCCCAGGACTCAGGTGCTaGAAAGGAGCGAGGAAGGTT +
Preference number: 5 (lower is better)
Translates to: RSGKRHVLNLCCCSSKHCPGLRC*KGARKV
Trigger: AACCTTCCTCGCTCCTTTCAAGCACCTGAGTCCTGG...GCAATGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTTTCCAGATCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CAA 90 bp CCAGCGATCTGGAAAGAGGCACGTTCTGAATTTGTGTTGTTGCTCGTCCAAACAAGGCCGGAAACCACATaGCTGATCTTCCTGATGGGA +
Preference number: 5 (lower is better)
Translates to: PAIWKEARSEFVLLLVQTRPETT*LIFLMG
Trigger: TCCCATCAGGAAGATCAGCAATGTGGTTTCCGGCCT...TGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTTTCCAGATCGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS GCA 90 bp CTGAGGGTGTCGTCATCCTCCGTGTTTGTGATGCCAGGACTCAGGTaGTTGAAAGGAGCGAGGAAGGTTGACAATATGCTTACTTTATCT +
Preference number: 5 (lower is better)
Translates to: LRVSSSSVFVMPGLR*LKGARKVDNMLTLS
Trigger: AGATAAAGTAAGCATATTGTCAACCTTCCTCGCTCCTTTCAAGCACCTGAGTCCTGGCATCACAAACACGGAGGATGACGACACCCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CAA 90 bp TTTGTGGCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCAAGGCACGTTCTGAATTaGTGTTGTTGCTCGTCCAAA +
Preference number: 5 (lower is better)
Translates to: FVAYLHVPPQASETPASPRHVLN*CCCSSK
Trigger: TTTGGACGAGCAACAACACAAATTCAGAACGTGCCT...TGGTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGCCACAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR CAA 90 bp CGATCTGGAAAGAGGCACGTTCTGAATTTGTGTTGTTGCTCGTCCAAACATTGCGGACTTGCATTTGAGTaGACTGCTCAGCCCTCCAGA +
Preference number: 5 (lower is better)
Translates to: RSGKRHVLNLCCCSSKHCGLAFE*TAQPSR
Trigger: TCTGGAGGGCTGAGCAGTCAACTCAAATGCAAGTCC...GCAATGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTTTCCAGATCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CAA 90 bp TCGTCCAAACATTGCACACTCGCGTGTTTCTGGGACACCAAAGTAAAACGAATGCAGAAACAGCGTGATTaGGAGCCCACTGGGACAAAG +
Preference number: 5 (lower is better)
Translates to: SSKHCTLACFWDTKVKRMQKQRD*EPTGTK
Trigger: CTTTGTCCCAGTGGGCTCCAAATCACGCTGTTTCTG...CATTCGTTTTACTTTGGTGTCCCAGAAACACGCGAGTGTGCAATGTTTGGACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CAA 90 bp TGCAGAAACAGCGTGATTTGGAGCCCACTGGGACAAAGCATTATATGCTTCTCTTTGCTCGTCCAAACATaGCACACTCGCGTGTTTCTG +
Preference number: 5 (lower is better)
Translates to: CRNSVIWSPLGQSIICFSLLVQT*HTRVFL
Trigger: CAGAAACACGCGAGTGTGCAATGTTTGGACGAGCAA...AGAGAAGCATATAATGCTTTGTCCCAGTGGGCTCCAAATCACGCTGTTTCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CAA 90 bp TTTGTGGCTTATCTTCATGTGCCCCCTCAAGCTAGTGAGACCCCAGCATCACCACGTTCTGAATTTGTGTaGTTGCTCGTCCAAACATTG +
Preference number: 5 (lower is better)
Translates to: FVAYLHVPPQASETPASPRSEFV*LLVQTL
Trigger: CAATGTTTGGACGAGCAACAACACAAATTCAGAACG...TGGTGATGCTGGGGTCTCACTAGCTTGAGGGGGCACATGAAGATAAGCCACAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR CAA 90 bp TCACCAGGGTTTGATCTGTCTGCGGTTCCCGCAGGAGTGATATTGTTTGGTGTGATAGAAACTGGTCGTTaGAGCTTAGCTTTTGCACTG +
Preference number: 5 (lower is better)
Translates to: SPGFDLSAVPAGVILFGVIETGR*SLAFAL
Trigger: CAGTGCAAAAGCTAAGCTCAAACGACCAGTTTCTAT...CACACCAAACAATATCACTCCTGCGGGAACCGCAGACAGATCAAACCCTGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CAA 90 bp TTGTTGCTCGTCCAAACATTGCACACTCGCGTGTTTCTGGGACACCAAAGTAAAAAGGAGCCAGGAGTTTaGGGACAGGGACTAACAAGA +
Preference number: 5 (lower is better)
Translates to: LLLVQTLHTRVFLGHQSKKEPGV*GQGLTR
Trigger: TCTTGTTAGTCCCTGTCCCAAAACTCCTGGCTCCTT...TTTACTTTGGTGTCCCAGAAACACGCGAGTGTGCAATGTTTGGACGAGCAACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS CCA 90 bp ACCCAGACTTCCTGTGACCACATTGTTGTTAGTTTATCAGGCTTGTaGGGAATTCATGGCTCTTTTAGGGAAACTCATGCTGTCCCCACA +
Preference number: 5 (lower is better)
Translates to: TQTSCDHIVVSLSGL*GIHGSFRETHAVPT
Trigger: TGTGGGGACAGCATGAGTTTCCCTAAAAGAGCCATGAATTCCCCACAAGCCTGATAAACTAACAACAATGTGGTCACAGGAAGTCTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469464.1
CDS-3UTR CAA 90 bp CGATCTGGAAAGAGGCACGTTCTGAATTTGTGTTGTTGCTCGTCCAAACATTGCAATAGAGGATTCTTATaGGTTTCTCTGGGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: RSGKRHVLNLCCCSSKHCNRGFL*VSLGLG
Trigger: CCCCAGCCCCAGAGAAACCAATAAGAATCCTCTATT...GCAATGTTTGGACGAGCAACAACACAAATTCAGAACGTGCCTCTTTCCAGATCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR CAA 90 bp TTGTTGCTCGTCCAAACATTGCACACTCGCGTGTTTCTGGGACACCAAAGTAAACGTTCTGAATTTGTGTaGTTGCTCGTCCAAACATTG +
Preference number: 5 (lower is better)
Translates to: LLLVQTLHTRVFLGHQSKRSEFV*LLVQTL
Trigger: CAATGTTTGGACGAGCAACAACACAAATTCAGAACG...TTTACTTTGGTGTCCCAGAAACACGCGAGTGTGCAATGTTTGGACGAGCAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000381312.6
CDS-3UTR CAA 90 bp CTGCAGAAACAGCGTGATTTGGAGCCCACTGGGACAAAGCATTATATGCTTCTCAAGGAGCGAGGAAGGTaGACAATATGCTTACTTTAT +
Preference number: 5 (lower is better)
Translates to: LQKQRDLEPTGTKHYMLLKERGR*TICLLY
Trigger: ATAAAGTAAGCATATTGTCAACCTTCCTCGCTCCTT...GAGAAGCATATAATGCTTTGTCCCAGTGGGCTCCAAATCACGCTGTTTCTGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS-3UTR CAA 90 bp TTGTTGCTCGTCCAAACATTGCACACTCGCGTGTTTCTGGGACACCAAAGTAAAAAAAAGCATGCGACTTaGTTGATAAGAAAAGCTCCC +
Preference number: 5 (lower is better)
Translates to: LLLVQTLHTRVFLGHQSKKKHAT*LIRKAP
Trigger: GGGAGCTTTTCTTATCAACAAAGTCGCATGCTTTTT...TTTACTTTGGTGTCCCAGAAACACGCGAGTGTGCAATGTTTGGACGAGCAACAA
43% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS GCA 72 bp CGGCCTGCGCGGCCTGACCCCGGGCCAGCTTCTTGCTaGGCCCCGAGCCCTCGAACGTCCTGCCGTCCACGC +
Preference number: 6 (lower is better)
Translates to: RPARPDPGPASC*APSPRTSCRPR
Trigger: GCGTGGACGGCAGGACGTTCGAGGGCTCGGGGCGCAGCAAGAAGCTGGCCCGGGGTCAGGCCGCGCAGGCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS GCA 72 bp GTGCGGCCTGCGCGGCCTGACCCCGGGCCAGCTTCTTaGTGCGCCCCGAGCCCTCGAACGTCCTGCCGTCCA +
Preference number: 6 (lower is better)
Translates to: VRPARPDPGPAS*CAPSPRTSCRP
Trigger: TGGACGGCAGGACGTTCGAGGGCTCGGGGCGCAGCAAGAAGCTGGCCCGGGGTCAGGCCGCGCAGGCCGCAC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS CCA 72 bp TCAGCATCGCCTCCTGTGGGCGGCCAGGTGGGCAGGTaGGCAGGTGGGCGGCCAGGTGGGCAGGTGGGGCCT +
Preference number: 6 (lower is better)
Translates to: SASPPVGGQVGR*AGGRPGGQVGP
Trigger: AGGCCCCACCTGCCCACCTGGCCGCCCACCTGCCCACCTGCCCACCTGGCCGCCCACAGGAGGCGATGCTGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477140.1
CDS GCA 72 bp GCTACCGCGAAGACCGGGGCATGCACCGGGCCCGTCTaGGACACTGTCCGGTACTGCAGGCCCGGCCTCAGC +
Preference number: 6 (lower is better)
Translates to: ATAKTGACTGPV*DTVRYCRPGLS
Trigger: GCTGAGGCCGGGCCTGCAGTACCGGACAGTGTCGCAGACGGGCCCGGTGCATGCCCCGGTCTTCGCGGTAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS GCA 72 bp CCCCGACTGGCCGGCAGCCTCAGGCCAGGCTGTGTTTaGCCCATGCAGCCACAGCCTGGGGTTGCCGGGCCT +
Preference number: 6 (lower is better)
Translates to: PRLAGSLRPGCV*PMQPQPGVAGP
Trigger: AGGCCCGGCAACCCCAGGCTGTGGCTGCATGGGGCAAACACAGCCTGGCCTGAGGCTGCCGGCCAGTCGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469464.1
CDS CCA 72 bp CTGGTGCGAAGCCGGCCCAGTACTCGCGGAGTAACCTaGCAGCCTCTGGAGGGTGTGGAGGGCCCGGGGCCC +
Preference number: 6 (lower is better)
Translates to: LVRSRPSTRGVT*QPLEGVEGPGP
Trigger: GGGCCCCGGGCCCTCCACACCCTCCAGAGGCTGCCAGGTTACTCCGCGAGTACTGGGCCGGCTTCGCACCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477140.1
CDS CAA 72 bp CCGGAGGGCGGTGGCCGCGCGGCCAGGTTGCCCACGTaGCGGTTCTCCTTCACCTCCGCGCTGCTGGTACTG +
Preference number: 6 (lower is better)
Translates to: PEGGGRAARLPT*RFSFTSALLVL
Trigger: CAGTACCAGCAGCGCGGAGGTGAAGGAGAACCGCAACGTGGGCAACCTGGCCGCGCGGCCACCGCCCTCCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS GCA 72 bp GCATGCACCGGGCCCGTCTGCGACACTGTCCGGTACTaGAGGCCCGGCCTCAGCTCGTGCAGCTGCACCAGC +
Preference number: 6 (lower is better)
Translates to: ACTGPVCDTVRY*RPGLSSCSCTS
Trigger: GCTGGTGCAGCTGCACGAGCTGAGGCCGGGCCTGCAGTACCGGACAGTGTCGCAGACGGGCCCGGTGCATGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS CAA 72 bp CCATACAGCCGCGCCCACCGTGCAGACAGCACGTGCTaGCAGAGCCGGGATGGGCCCCCACAGCTCCTCCGC +
Preference number: 6 (lower is better)
Translates to: PYSRAHRADSTC*QSRDGPPQLLR
Trigger: GCGGAGGAGCTGTGGGGGCCCATCCCGGCTCTGCAAGCACGTGCTGTCTGCACGGTGGGCGCGGCTGTATGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381305.1
ENST00000381310.7
ENST00000381312.6
ENST00000474762.5
ENST00000490172.1
CDS CAA 90 bp CTCAGCCTGCCATACAGCCGCGCCCACCGTGCAGACAGCACGTGCTaGCAGAGCCGGGATGGGCCCCCACAGCTCCTCCGCCCAGTGGTG +
Preference number: 6 (lower is better)
Translates to: LSLPYSRAHRADSTC*QSRDGPPQLLRPVV
Trigger: CACCACTGGGCGGAGGAGCTGTGGGGGCCCATCCCGGCTCTGCAAGCACGTGCTGTCTGCACGGTGGGCGCGGCTGTATGGCAGGCTGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381305.1
ENST00000381310.7
ENST00000381312.6
ENST00000474762.5
ENST00000490172.1
CDS CAA 90 bp TCGGGGCTGTTTGCCTCTGCAGCGGCAGCCTCGGGTGGCAGGGCCTaGCTCCCTCAGGGACTCGGGGTGCCTTGGCCTCAGGGTGTGGGA +
Preference number: 6 (lower is better)
Translates to: SGLFASAAAASGGRA*LPQGLGVPWPQGVG
Trigger: TCCCACACCCTGAGGCCAAGGCACCCCGAGTCCCTGAGGGAGCAAGGCCCTGCCACCCGAGGCTGCCGCTGCAGAGGCAAACAGCCCCGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469464.1
CDS GCA 72 bp CTGCCATACAGCCGCGCCCACCGTGCAGACAGCACGTaGTTGCAGAGCCGGGATGGGCCCCCACAGCTCCTC +
Preference number: 6 (lower is better)
Translates to: LPYSRAHRADST*LQSRDGPPQLL
Trigger: GAGGAGCTGTGGGGGCCCATCCCGGCTCTGCAAGCACGTGCTGTCTGCACGGTGGGCGCGGCTGTATGGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381305.1
ENST00000381310.7
ENST00000381312.6
ENST00000474762.5
ENST00000490172.1
CDS GCA 72 bp CCGTGTGCTCAGCCTGCCATACAGCCGCGCCCACCGTaGAGACAGCACGTGCTTGCAGAGCCGGGATGGGCC +
Preference number: 6 (lower is better)
Translates to: PCAQPAIQPRPP*RQHVLAEPGWA
Trigger: GGCCCATCCCGGCTCTGCAAGCACGTGCTGTCTGCACGGTGGGCGCGGCTGTATGGCAGGCTGAGCACACGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381305.1
ENST00000381310.7
ENST00000381312.6
ENST00000474762.5
ENST00000490172.1
CDS GCA 72 bp CCGTTCACCTCCACCGCTACCGCGAAGACCGGGGCATaGACCGGGCCCGTCTGCGACACTGTCCGGTACTGC +
Preference number: 6 (lower is better)
Translates to: PFTSTATAKTGA*TGPVCDTVRYC
Trigger: GCAGTACCGGACAGTGTCGCAGACGGGCCCGGTGCATGCCCCGGTCTTCGCGGTAGCGGTGGAGGTGAACGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS GCA 72 bp CCAGCTTCTTGCTGCGCCCCGAGCCCTCGAACGTCCTaGCGTCCACGCTCACGGCCATCACGAAGCTCCGCG +
Preference number: 6 (lower is better)
Translates to: PASCCAPSPRTS*RPRSRPSRSSA
Trigger: CGCGGAGCTTCGTGATGGCCGTGAGCGTGGACGGCAGGACGTTCGAGGGCTCGGGGCGCAGCAAGAAGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS CCA 72 bp CCACCGTGCAGACAGCACGTGCTTGCAGAGCCGGGATaGGCCCCCACAGCTCCTCCGCCCAGTGGTGGCGTT +
Preference number: 6 (lower is better)
Translates to: PPCRQHVLAEPG*APTAPPPSGGV
Trigger: AACGCCACCACTGGGCGGAGGAGCTGTGGGGGCCCATCCCGGCTCTGCAAGCACGTGCTGTCTGCACGGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381305.1
ENST00000381310.7
ENST00000381312.6
ENST00000474762.5
ENST00000490172.1
CDS CCA 72 bp TGCGGCATTGGCGTCCTCCTGGCCCTGCCGGGCGCGTaGCCGGGCATCTGGATGTCGAACAGCTCCTGCAGT +
Preference number: 6 (lower is better)
Translates to: CGIGVLLALPGA*PGIWMSNSSCS
Trigger: ACTGCAGGAGCTGTTCGACATCCAGATGCCCGGCCACGCGCCCGGCAGGGCCAGGAGGACGCCAATGCCGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS CCA 72 bp GCAGAGCAGCTCAGGAGCTTGGGGCGTGGCAGCGACTaGAGGTGCTGGGAGGGAGGCGGGTGCCCATTCTGC +
Preference number: 6 (lower is better)
Translates to: AEQLRSLGRGSD*RCWEGGGCPFC
Trigger: GCAGAATGGGCACCCGCCTCCCTCCCAGCACCTCCAGTCGCTGCCACGCCCCAAGCTCCTGAGCTGCTCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469464.1
CDS CAA 72 bp CCACGCACGGGGACCGTCCCTTCCCCGGACTCGATCTaGGTGCGCAGGTGCCCGCGGAACTTCCTGACGAGG +
Preference number: 6 (lower is better)
Translates to: PRTGTVPSPDSI*VRRCPRNFLTR
Trigger: CCTCGTCAGGAAGTTCCGCGGGCACCTGCGCACCAAGATCGAGTCCGGGGAAGGGACGGTCCCCGTGCGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381312.6
ENST00000469464.1
CDS CAA 90 bp TTCACCACCAGCCCCTGGTCACTGAGGTGCTCGCCGCTGATGCACTaGGTCCCCGAGGACAGGGCCACGACCTGCGCCTGCCGAGCATCC +
Preference number: 6 (lower is better)
Translates to: FTTSPWSLRCSPLMH*VPEDRATTCACRAS
Trigger: GGATGCTCGGCAGGCGCAGGTCGTGGCCCTGTCCTCGGGGACCAAGTGCATCAGCGGCGAGCACCTCAGTGACCAGGGGCTGGTGGTGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS TCA 72 bp GCGCCTGGCAGGCGTTGGGGAACTGCACGAAGGACCTaGGTGCCAGCTCCGCCGCGCGCATCTTGGCCTTCT +
Preference number: 6 (lower is better)
Translates to: APGRRWGTARRT*VPAPPRASWPS
Trigger: AGAAGGCCAAGATGCGCGCGGCGGAGCTGGCACTCAGGTCCTTCGTGCAGTTCCCCAACGCCTGCCAGGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS GCA 72 bp TACACGGGCTCCACGAAGTGGGACAGGAGCGCGCCCTaGAGCCCCAGGACGTTCCACCTGTGGGGAGAGCCA +
Preference number: 6 (lower is better)
Translates to: YTGSTKWDRSAP*SPRTFHLWGEP
Trigger: TGGCTCTCCCCACAGGTGGAACGTCCTGGGGCTGCAGGGCGCGCTCCTGTCCCACTTCGTGGAGCCCGTGTA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000477140.1
CDS GCA 72 bp CGGTGGCTCATGACGCGTGCGAGGTGGCCCGTGTGGTaGAGGCTGCCCACCACGATGCTCTGCAGGTACACG +
Preference number: 6 (lower is better)
Translates to: RWLMTRARWPVW*RLPTTMLCRYT
Trigger: CGTGTACCTGCAGAGCATCGTGGTGGGCAGCCTGCACCACACGGGCCACCTCGCACGCGTCATGAGCCACCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381305.1
ENST00000381310.7
ENST00000381312.6
ENST00000477140.1
CDS GCA 72 bp TACACGGGCTCCACGAAGTGGGACAGGAGCGCGCCCTaGAGCCCCAGGACGTTCCACCTTGGGGAGCTCCCT +
Preference number: 6 (lower is better)
Translates to: YTGSTKWDRSAP*SPRTFHLGELP
Trigger: AGGGAGCTCCCCAAGGTGGAACGTCCTGGGGCTGCAGGGCGCGCTCCTGTCCCACTTCGTGGAGCCCGTGTA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381305.1
CDS GCA 72 bp CCTGAGTGCTCCGAGCTTCCCGCGGGCTCTGCCTCCTaGTCTGGGCTCCCAGCGCAGGGAGGCTACTTTTGC +
Preference number: 6 (lower is better)
Translates to: PECSELPAGSAS*SGLPAQGGYFC
Trigger: GCAAAAGTAGCCTCCCTGCGCTGGGAGCCCAGAGCAGGAGGCAGAGCCCGCGGGAAGCTCGGAGCACTCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS CCA 72 bp ACACCCTCCATGCGGTGGCTCATGACGCGTGCGAGGTaGCCCGTGTGGTGCAGGCTGCCCACCACGATGCTC +
Preference number: 6 (lower is better)
Translates to: TPSMRWLMTRAR*PVWCRLPTTML
Trigger: GAGCATCGTGGTGGGCAGCCTGCACCACACGGGCCACCTCGCACGCGTCATGAGCCACCGCATGGAGGGTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381305.1
ENST00000381310.7
ENST00000381312.6
ENST00000477140.1
CDS CCA 72 bp TGGAGTCTGCGAATTCCTGCGGCATTGGCGTCCTCCTaGCCCTGCCGGGCGCGTGGCCGGGCATCTGGATGT +
Preference number: 6 (lower is better)
Translates to: WSLRIPAALASS*PCRARGRASGC
Trigger: ACATCCAGATGCCCGGCCACGCGCCCGGCAGGGCCAGGAGGACGCCAATGCCGCAGGAATTCGCAGACTCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS CCA 72 bp AAGTGCAGGAACGCCCGCCGGGCCACGACCTCCGCGTaGCAGTCATTCACCACCAGCCCCTGGTCACTGAGG +
Preference number: 6 (lower is better)
Translates to: KCRNARRATTSA*QSFTTSPWSLR
Trigger: CCTCAGTGACCAGGGGCTGGTGGTGAATGACTGCCACGCGGAGGTCGTGGCCCGGCGGGCGTTCCTGCACTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS CCA 72 bp GGCCCTGGCTTCTCGTTAGCCTATGGCCACCCCGACTaGCCGGCAGCCTCAGGCCAGGCTGTGTTTGCCCCA +
Preference number: 6 (lower is better)
Translates to: GPGFSLAYGHPD*PAASGQAVFAP
Trigger: TGGGGCAAACACAGCCTGGCCTGAGGCTGCCGGCCAGTCGGGGTGGCCATAGGCTAACGAGAAGCCAGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469464.1
CDS CAA 72 bp GATGGGCCCCCACAGCTCCTCCGCCCAGTGGTGGCGTaGATAATCTCCAGGTCCGCGCTGCCCACGACCCAG +
Preference number: 6 (lower is better)
Translates to: DGPPQLLRPVVA*IISRSALPTTQ
Trigger: CTGGGTCGTGGGCAGCGCGGACCTGGAGATTATCAACGCCACCACTGGGCGGAGGAGCTGTGGGGGCCCATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381305.1
ENST00000381310.7
ENST00000381312.6
ENST00000474762.5
ENST00000490172.1
CDS CAA 72 bp CCCGGCCTCAGCTCGTGCAGCTGCACCAGCGCGTTCTaGGGCGCCACCGACCACGACAGCTTCTTCCAGACC +
Preference number: 6 (lower is better)
Translates to: PGLSSCSCTSAF*GATDHDSFFQT
Trigger: GGTCTGGAAGAAGCTGTCGTGGTCGGTGGCGCCCAAGAACGCGCTGGTGCAGCTGCACGAGCTGAGGCCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS CAA 90 bp CAGAGCCGGGATGGGCCCCCACAGCTCCTCCGCCCAGTGGTGGCGTaGATAATCTCCAGGTCCGCGCTGCCCACGACCCAGTTCATGCTG +
Preference number: 6 (lower is better)
Translates to: QSRDGPPQLLRPVVA*IISRSALPTTQFML
Trigger: CAGCATGAACTGGGTCGTGGGCAGCGCGGACCTGGAGATTATCAACGCCACCACTGGGCGGAGGAGCTGTGGGGGCCCATCCCGGCTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381305.1
ENST00000381310.7
ENST00000381312.6
ENST00000474762.5
ENST00000490172.1
CDS CAA 90 bp GGGAACTGCACGAAGGACCTGAGTGCCAGCTCCGCCGCGCGCATCTaGGCCTTCTTCTTGGTGGGGCCTGTGCCCTCGAACGTGAGCCCG +
Preference number: 6 (lower is better)
Translates to: GNCTKDLSASSAARI*AFFLVGPVPSNVSP
Trigger: CGGGCTCACGTTCGAGGGCACAGGCCCCACCAAGAAGAAGGCCAAGATGCGCGCGGCGGAGCTGGCACTCAGGTCCTTCGTGCAGTTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS GCA 72 bp TACACGGGCTCCACGAAGTGGGACAGGAGCGCGCCCTaGAGCCCCAGGACGTTCCACCTGGCGATCTTGTCC +
Preference number: 6 (lower is better)
Translates to: YTGSTKWDRSAP*SPRTFHLAILS
Trigger: GGACAAGATCGCCAGGTGGAACGTCCTGGGGCTGCAGGGCGCGCTCCTGTCCCACTTCGTGGAGCCCGTGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS CCA 72 bp GGTAGGTGTGCGCCCCCAGCTTGGCCTCACAGTACATaGAGGGCGTGTCTCCAGGGCTGGGTGTCCGTGTGC +
Preference number: 6 (lower is better)
Translates to: GRCAPPAWPHST*RACLQGWVSVC
Trigger: GCACACGGACACCCAGCCCTGGAGACACGCCCTCCATGTACTGTGAGGCCAAGCTGGGGGCGCACACCTACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381305.1
ENST00000381310.7
ENST00000381312.6
ENST00000474762.5
ENST00000490172.1
CDS CCA 72 bp CCGGCCTCAGCTCGTGCAGCTGCACCAGCGCGTTCTTaGGCGCCACCGACCACGACAGCTTCTTCCAGACCA +
Preference number: 6 (lower is better)
Translates to: PASARAAAPARS*APPTTTASSRP
Trigger: TGGTCTGGAAGAAGCTGTCGTGGTCGGTGGCGCCCAAGAACGCGCTGGTGCAGCTGCACGAGCTGAGGCCGG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS CCA 72 bp GCGTCACTCACGCCTGACGCGTTCCCCAAGCCCAGCTaGCCGGGTGTCTCCCTCTCATTCATGCCTCCTCGC +
Preference number: 6 (lower is better)
Translates to: ASLTPDAFPKPS*PGVSLSFMPPR
Trigger: GCGAGGAGGCATGAATGAGAGGGAGACACCCGGCCAGCTGGGCTTGGGGAACGCGTCAGGCGTGAGTGACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474762.5
CDS CAA 72 bp AGTGCCAGCTCCGCCGCGCGCATCTTGGCCTTCTTCTaGGTGGGGCCTGTGCCCTCGAACGTGAGCCCGTTC +
Preference number: 6 (lower is better)
Translates to: SASSAARILAFF*VGPVPSNVSPF
Trigger: GAACGGGCTCACGTTCGAGGGCACAGGCCCCACCAAGAAGAAGGCCAAGATGCGCGCGGCGGAGCTGGCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS CAA 90 bp TACTGCAGGCCCGGCCTCAGCTCGTGCAGCTGCACCAGCGCGTTCTaGGGCGCCACCGACCACGACAGCTTCTTCCAGACCAGCTGCAGT +
Preference number: 6 (lower is better)
Translates to: YCRPGLSSCSCTSAF*GATDHDSFFQTSCS
Trigger: ACTGCAGCTGGTCTGGAAGAAGCTGTCGTGGTCGGTGGCGCCCAAGAACGCGCTGGTGCAGCTGCACGAGCTGAGGCCGGGCCTGCAGTA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS CAA 90 bp AAGGACCTGAGTGCCAGCTCCGCCGCGCGCATCTTGGCCTTCTTCTaGGTGGGGCCTGTGCCCTCGAACGTGAGCCCGTTCACCTCCACC +
Preference number: 6 (lower is better)
Translates to: KDLSASSAARILAFF*VGPVPSNVSPFTST
Trigger: GGTGGAGGTGAACGGGCTCACGTTCGAGGGCACAGGCCCCACCAAGAAGAAGGCCAAGATGCGCGCGGCGGAGCTGGCACTCAGGTCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS GCA 72 bp CTGATGCACTTGGTCCCCGAGGACAGGGCCACGACCTaGGCCTGCCGAGCATCCAGGCCTTTGGTCATGACG +
Preference number: 6 (lower is better)
Translates to: LMHLVPEDRATT*ACRASRPLVMT
Trigger: CGTCATGACCAAAGGCCTGGATGCTCGGCAGGCGCAGGTCGTGGCCCTGTCCTCGGGGACCAAGTGCATCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS CCA 72 bp TCAGTCTTCCCATCGTGCGGACCTTGGGGAGCTCCCTaGGAGTGCCCCAGACCCAACCCAGCCATCACTGGG +
Preference number: 6 (lower is better)
Translates to: SVFPSCGPWGAP*ECPRPNPAITG
Trigger: CCCAGTGATGGCTGGGTTGGGTCTGGGGCACTCCCAGGGAGCTCCCCAAGGTCCGCACGATGGGAAGACTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000477140.1
CDS CCA 72 bp CCTGAGGACCTGTCAGTCTTCCCATCGTGCGGACCTTaGGGAGCTCCCTGGGAGTGCCCCAGACCCAACCCA +
Preference number: 6 (lower is better)
Translates to: PEDLSVFPSCGP*GAPWECPRPNP
Trigger: TGGGTTGGGTCTGGGGCACTCCCAGGGAGCTCCCCAAGGTCCGCACGATGGGAAGACTGACAGGTCCTCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381310.7
ENST00000477140.1
CDS CCA 72 bp CCACCGGCCGCAGCCAACATCCTCGAGAGGAAGCCGTaGGCCTCACCTGGCGATCTTGTCCGTGCAGGACAT +
Preference number: 6 (lower is better)
Translates to: PPAAANILERKP*ASPGDLVRAGH
Trigger: ATGTCCTGCACGGACAAGATCGCCAGGTGAGGCCCACGGCTTCCTCTCGAGGATGTTGGCTGCGGCCGGTGG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469464.1
CDS GCA 72 bp CCAACCCAGCCATCACTGGGGCTCTGGGGACACTGTTaGCTGGGACTGGGCTCCACAGGCCCATGTGTGCTA +
Preference number: 6 (lower is better)
Translates to: PTQPSLGLWGHC*LGLGSTGPCVL
Trigger: TAGCACACATGGGCCTGTGGAGCCCAGTCCCAGGCAACAGTGTCCCCAGAGCCCCAGTGATGGCTGGGTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381305.1
ENST00000477140.1
CDS GCA 72 bp GGCGCCACCGACCACGACAGCTTCTTCCAGACCAGCTaGAGTTTGCACAAGTGGCCCCCATTCCCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: GATDHDSFFQTS*SLHKWPPFPSS
Trigger: GGAGGAGGGGAATGGGGGCCACTTGTGCAAACTGCAGCTGGTCTGGAAGAAGCTGTCGTGGTCGGTGGCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS GCA 72 bp CTGGCAGGCGTTGGGGAACTGCACGAAGGACCTGAGTaGCAGCTCCGCCGCGCGCATCTTGGCCTTCTTCTT +
Preference number: 6 (lower is better)
Translates to: LAGVGELHEGPE*QLRRAHLGLLL
Trigger: AAGAAGAAGGCCAAGATGCGCGCGGCGGAGCTGGCACTCAGGTCCTTCGTGCAGTTCCCCAACGCCTGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS GCA 72 bp GTCATGACGATTCCTGCCAGCGCTTTATGGCGGGCGTaGATGGGCGTGAGGTCCGTCGTCACCTCGCGGAAC +
Preference number: 6 (lower is better)
Translates to: VMTIPASALWRA*MGVRSVVTSRN
Trigger: GTTCCGCGAGGTGACGACGGACCTCACGCCCATGCACGCCCGCCATAAAGCGCTGGCAGGAATCGTCATGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS GCA 72 bp CACTTGGTCCCCGAGGACAGGGCCACGACCTGCGCCTaGCGAGCATCCAGGCCTTTGGTCATGACGATTCCT +
Preference number: 6 (lower is better)
Translates to: HLVPEDRATTCA*RASRPLVMTIP
Trigger: AGGAATCGTCATGACCAAAGGCCTGGATGCTCGGCAGGCGCAGGTCGTGGCCCTGTCCTCGGGGACCAAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS GCA 72 bp ACCGTCCCTTCCCCGGACTCGATCTTGGTGCGCAGGTaGCCGCGGAACTTCCTGACGAGGTGTTTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: TVPSPDSILVRR*PRNFLTRCLLL
Trigger: CAGCAGCAAACACCTCGTCAGGAAGTTCCGCGGGCACCTGCGCACCAAGATCGAGTCCGGGGAAGGGACGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381312.6
ENST00000469464.1
CDS CCA 72 bp GCCTCAGGGTGTGGGACTGAACATGTGGAATGGCTGTaGAGTTCCACGGCTCAGGCACAGGGCCCTGACCGC +
Preference number: 6 (lower is better)
Translates to: ASGCGTEHVEWL*SSTAQAQGPDR
Trigger: GCGGTCAGGGCCCTGTGCCTGAGCCGTGGAACTCCACAGCCATTCCACATGTTCAGTCCCACACCCTGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469464.1
CDS CAA 72 bp TGGCAGGGCCTTGCTCCCTCAGGGACTCGGGGTGCCTaGGCCTCAGGGTGTGGGACTGAACATGTGGAATGG +
Preference number: 6 (lower is better)
Translates to: WQGLAPSGTRGA*ASGCGTEHVEW
Trigger: CCATTCCACATGTTCAGTCCCACACCCTGAGGCCAAGGCACCCCGAGTCCCTGAGGGAGCAAGGCCCTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469464.1
CDS TCA 72 bp CGCGCTCCGTCTCTCTGTCTCTCGAATTGTTCTCTATaGCTTGCTCCCACTGGGCTGGGGGCCTCGGCTGGG +
Preference number: 6 (lower is better)
Translates to: RAPSLCLSNCSL*LAPTGLGASAG
Trigger: CCCAGCCGAGGCCCCCAGCCCAGTGGGAGCAAGTCATAGAGAACAATTCGAGAGACAGAGAGACGGAGCGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS TCA 72 bp ATGGCTGTGGAGTTCCACGGCTCAGGCACAGGGCCCTaGCCGCATGTGCCCAGCATCACTGACCTCACCAGA +
Preference number: 6 (lower is better)
Translates to: MAVEFHGSGTGP*PHVPSITDLTR
Trigger: TCTGGTGAGGTCAGTGATGCTGGGCACATGCGGTCAGGGCCCTGTGCCTGAGCCGTGGAACTCCACAGCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469464.1
CDS GCA 72 bp CTGCCGAGCATCCAGGCCTTTGGTCATGACGATTCCTaGCAGCGCTTTATGGCGGGCGTGCATGGGCGTGAG +
Preference number: 6 (lower is better)
Translates to: LPSIQAFGHDDS*QRFMAGVHGRE
Trigger: CTCACGCCCATGCACGCCCGCCATAAAGCGCTGGCAGGAATCGTCATGACCAAAGGCCTGGATGCTCGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS CCA 72 bp GCTGTTTCACAGACTGGTAGGTGTGCGCCCCCAGCTTaGCCTCACAGTACATGGAGGGCGTGTCTCCAGGGC +
Preference number: 6 (lower is better)
Translates to: AVSQTGRCAPPA*PHSTWRACLQG
Trigger: GCCCTGGAGACACGCCCTCCATGTACTGTGAGGCCAAGCTGGGGGCGCACACCTACCAGTCTGTGAAACAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381305.1
ENST00000381310.7
ENST00000381312.6
ENST00000474762.5
ENST00000490172.1
CDS CCA 72 bp AGGCCTTTGGTCATGACGATTCCTGCCAGCGCTTTATaGCGGGCGTGCATGGGCGTGAGGTCCGTCGTCACC +
Preference number: 6 (lower is better)
Translates to: RPLVMTIPASAL*RACMGVRSVVT
Trigger: GGTGACGACGGACCTCACGCCCATGCACGCCCGCCATAAAGCGCTGGCAGGAATCGTCATGACCAAAGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS CAA 72 bp CTCCGTCTCTCTGTCTCTCGAATTGTTCTCTATGACTaGCTCCCACTGGGCTGGGGGCCTCGGCTGGGCGCC +
Preference number: 6 (lower is better)
Translates to: LRLSVSRIVLYD*LPLGWGPRLGA
Trigger: GGCGCCCAGCCGAGGCCCCCAGCCCAGTGGGAGCAAGTCATAGAGAACAATTCGAGAGACAGAGAGACGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS TCA 72 bp AGGGACTCGGGGTGCCTTGGCCTCAGGGTGTGGGACTaGACATGTGGAATGGCTGTGGAGTTCCACGGCTCA +
Preference number: 6 (lower is better)
Translates to: RDSGCLGLRVWD*TCGMAVEFHGS
Trigger: TGAGCCGTGGAACTCCACAGCCATTCCACATGTTCAGTCCCACACCCTGAGGCCAAGGCACCCCGAGTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469464.1
CDS GCA 72 bp TCCGTCTCTCTGTCTCTCGAATTGTTCTCTATGACTTaGTCCCACTGGGCTGGGGGCCTCGGCTGGGCGCCT +
Preference number: 6 (lower is better)
Translates to: SVSLSLELFSMT*SHWAGGLGWAP
Trigger: AGGCGCCCAGCCGAGGCCCCCAGCCCAGTGGGAGCAAGTCATAGAGAACAATTCGAGAGACAGAGAGACGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS CAA 90 bp TCAGGACTGAGCAGGAAAGCGCGCTCCGTCTCTCTGTCTCTCGAATaGTTCTCTATGACTTGCTCCCACTGGGCTGGGGGCCTCGGCTGG +
Preference number: 6 (lower is better)
Translates to: SGLSRKARSVSLSLE*FSMTCSHWAGGLGW
Trigger: CCAGCCGAGGCCCCCAGCCCAGTGGGAGCAAGTCATAGAGAACAATTCGAGAGACAGAGAGACGGAGCGCGCTTTCCTGCTCAGTCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS TCA 72 bp AGGTTGCAAACCCGGGAGCGGCTCACTTTTCAGGACTaGGCAGGAAAGCGCGCTCCGTCTCTCTGTCTCTCG +
Preference number: 6 (lower is better)
Translates to: RLQTRERLTFQD*AGKRAPSLCLS
Trigger: CGAGAGACAGAGAGACGGAGCGCGCTTTCCTGCTCAGTCCTGAAAAGTGAGCCGCTCCCGGGTTTGCAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS GCA 72 bp TCCTGCTCTGGGCTCCCAGCGCAGGGAGGCTACTTTTaGGCCTCTGCTAGTTGTTTGGCACCAGCCACTTTG +
Preference number: 6 (lower is better)
Translates to: SCSGLPAQGGYF*ASASCLAPATL
Trigger: CAAAGTGGCTGGTGCCAAACAACTAGCAGAGGCGCAAAAGTAGCCTCCCTGCGCTGGGAGCCCAGAGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS CCA 72 bp TCCGTCGTCACCTCGCGGAACTTCTGTGTGACCAGCTaGGATATGGAGTCTGCGAATTCCTGCGGCATTGGC +
Preference number: 6 (lower is better)
Translates to: SVVTSRNFCVTS*DMESANSCGIG
Trigger: GCCAATGCCGCAGGAATTCGCAGACTCCATATCCCAGCTGGTCACACAGAAGTTCCGCGAGGTGACGACGGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS CAA 72 bp AGCAGGAAAGCGCGCTCCGTCTCTCTGTCTCTCGAATaGTTCTCTATGACTTGCTCCCACTGGGCTGGGGGC +
Preference number: 6 (lower is better)
Translates to: SRKARSVSLSLE*FSMTCSHWAGG
Trigger: GCCCCCAGCCCAGTGGGAGCAAGTCATAGAGAACAATTCGAGAGACAGAGAGACGGAGCGCGCTTTCCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS GCA 72 bp GCTTGCTTCTGCCGGTCTTGCTGTTTTCACACGTTCTaGCCCATGGGTGATGGATTGTGTTCTGTGGGGCCC +
Preference number: 6 (lower is better)
Translates to: ACFCRSCCFHTF*PMGDGLCSVGP
Trigger: GGGCCCCACAGAACACAATCCATCACCCATGGGGCAGAACGTGTGAAAACAGCAAGACCGGCAGAAGCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469464.1
CDS CAA 90 bp GAGCTCAGCCGAGGCCTCTCATCCCGAGACCTCCACATGGAGGCTTaGAAAACTCCATCCAAGAAGACAATATCTCGGGATGGTAGGGGA +
Preference number: 6 (lower is better)
Translates to: ELSRGLSSRDLHMEA*KTPSKKTISRDGRG
Trigger: TCCCCTACCATCCCGAGATATTGTCTTCTTGGATGGAGTTTTCAAAGCCTCCATGTGGAGGTCTCGGGATGAGAGGCCTCGGCTGAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469464.1
CDS CCA 72 bp TTCCACCCAGCTGACCTCAAGGCCTTTGGCTGTCCCTaGACATTAGTCAGGTTTTTGTGGAAAGCCCAGTGG +
Preference number: 6 (lower is better)
Translates to: FHPADLKAFGCP*TLVRFLWKAQW
Trigger: CCACTGGGCTTTCCACAAAAACCTGACTAATGTCCAGGGACAGCCAAAGGCCTTGAGGTCAGCTGGGTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469464.1
CDS TCA 72 bp GAGGCCTCTCATCCCGAGACCTCCACATGGAGGCTTTaGAAACTCCATCCAAGAAGACAATATCTCGGGATG +
Preference number: 6 (lower is better)
Translates to: EASHPETSTWRL*KLHPRRQYLGM
Trigger: CATCCCGAGATATTGTCTTCTTGGATGGAGTTTTCAAAGCCTCCATGTGGAGGTCTCGGGATGAGAGGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469464.1
CDS CAA 72 bp CGAGGCCTCTCATCCCGAGACCTCCACATGGAGGCTTaGAAAACTCCATCCAAGAAGACAATATCTCGGGAT +
Preference number: 6 (lower is better)
Translates to: RGLSSRDLHMEA*KTPSKKTISRD
Trigger: ATCCCGAGATATTGTCTTCTTGGATGGAGTTTTCAAAGCCTCCATGTGGAGGTCTCGGGATGAGAGGCCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469464.1
CDS CAA 90 bp AGGGTGTTCTGGGTCCCTCAACCCAGACTTCCTGTGACCACATTGTaGTTAGTTTATCAGGCTTGTGGGGAATTCATGGCTCTTTTAGGG +
Preference number: 6 (lower is better)
Translates to: RVFWVPQPRLPVTTL*LVYQACGEFMALLG
Trigger: CCCTAAAAGAGCCATGAATTCCCCACAAGCCTGATAAACTAACAACAATGTGGTCACAGGAAGTCTGGGTTGAGGGACCCAGAACACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469464.1
CDS CAA 72 bp TGGGTCCCTCAACCCAGACTTCCTGTGACCACATTGTaGTTAGTTTATCAGGCTTGTGGGGAATTCATGGCT +
Preference number: 6 (lower is better)
Translates to: WVPQPRLPVTTL*LVYQACGEFMA
Trigger: AGCCATGAATTCCCCACAAGCCTGATAAACTAACAACAATGTGGTCACAGGAAGTCTGGGTTGAGGGACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469464.1
CDS CAA 90 bp AGGGTGTCGTCATCCTCCGTGTTTGTGATGCCAGGACTCAGGTGCTaGAAAGGAGCGAGGAAGGTTGACAATATGCTTACTTTATCTTTC +
Preference number: 6 (lower is better)
Translates to: RVSSSSVFVMPGLRC*KGARKVDNMLTLSF
Trigger: GAAAGATAAAGTAAGCATATTGTCAACCTTCCTCGCTCCTTTCAAGCACCTGAGTCCTGGCATCACAAACACGGAGGATGACGACACCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381312.6
CDS CAA 90 bp CCAAGGGTGTTCTGGGTCCCTCAACCCAGACTTCCTGTGACCACATaGTTGTTAGTTTATCAGGCTTGTGGGGAATTCATGGCTCTTTTA +
Preference number: 6 (lower is better)
Translates to: PRVFWVPQPRLPVTT*LLVYQACGEFMALL
Trigger: TAAAAGAGCCATGAATTCCCCACAAGCCTGATAAACTAACAACAATGTGGTCACAGGAAGTCTGGGTTGAGGGACCCAGAACACCCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469464.1
CDS CAA 90 bp TCAACCCAGACTTCCTGTGACCACATTGTTGTTAGTTTATCAGGCTaGTGGGGAATTCATGGCTCTTTTAGGGAAACTCATGCTGTCCCC +
Preference number: 6 (lower is better)
Translates to: STQTSCDHIVVSLSG*WGIHGSFRETHAVP
Trigger: GGGGACAGCATGAGTTTCCCTAAAAGAGCCATGAATTCCCCACAAGCCTGATAAACTAACAACAATGTGGTCACAGGAAGTCTGGGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469464.1
CDS CCA 72 bp TCCTGTGACCACATTGTTGTTAGTTTATCAGGCTTGTaGGGAATTCATGGCTCTTTTAGGGAAACTCATGCT +
Preference number: 6 (lower is better)
Translates to: SCDHIVVSLSGL*GIHGSFRETHA
Trigger: AGCATGAGTTTCCCTAAAAGAGCCATGAATTCCCCACAAGCCTGATAAACTAACAACAATGTGGTCACAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469464.1
CDS CAA 72 bp ACTTCCTGTGACCACATTGTTGTTAGTTTATCAGGCTaGTGGGGAATTCATGGCTCTTTTAGGGAAACTCAT +
Preference number: 6 (lower is better)
Translates to: TSCDHIVVSLSG*WGIHGSFRETH
Trigger: ATGAGTTTCCCTAAAAGAGCCATGAATTCCCCACAAGCCTGATAAACTAACAACAATGTGGTCACAGGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469464.1