RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADAP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000184060

Ensembl transcript IDs: ENST00000330889.8, ENST00000470962.1, ENST00000480980.1, ENST00000580525.5, ENST00000580526.1, ENST00000581285.5, ENST00000581548.5, ENST00000583688.1, ENST00000584828.5, ENST00000585130.5

Found 361 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCCACAGCTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCTGCTaGCTGCGGGGCACTGATGGTGGGCAGCCAGGGCCGAGGTGCAAA +
Preference number: 1 (lower is better)
Translates to: ATASVLAEFTARNGC*LRGTDGGQPGPRCK
Trigger: TTTGCACCTCGGCCCTGGCTGCCCACCATCAGTGCCCCGCAGTCAGCAGCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAGCTGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
3UTR TCA 90 bp CCTGGCAGAGTTCACTGCCAGGAATGGCTGCTGACTGCGGGGCACTaGTGGTGGGCAGCCAGGGCCGAGGTGCAAACTTCTTCCCACAAG +
Preference number: 1 (lower is better)
Translates to: PGRVHCQEWLLTAGH*WWAARAEVQTSSHK
Trigger: CTTGTGGGAAGAAGTTTGCACCTCGGCCCTGGCTGCCCACCATCAGTGCCCCGCAGTCAGCAGCCATTCCTGGCAGTGAACTCTGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
3UTR GCA 90 bp CAGCTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCTGCTGACTaGGGGGCACTGATGGTGGGCAGCCAGGGCCGAGGTGCAAACTTC +
Preference number: 1 (lower is better)
Translates to: QLQSWQSSLPGMAAD*GALMVGSQGRGANF
Trigger: GAAGTTTGCACCTCGGCCCTGGCTGCCCACCATCAGTGCCCCGCAGTCAGCAGCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
3UTR TCA 90 bp GATCCTCAGATCCCCGAGGTGGGTTGCGGGGAAGGCCCAGGGAGCTaGTGGATAAAGCCACAGCTTCAGTCCTGGCAGAGTTCACTGCCA +
Preference number: 1 (lower is better)
Translates to: DPQIPEVGCGEGPGS*WIKPQLQSWQSSLP
Trigger: TGGCAGTGAACTCTGCCAGGACTGAAGCTGTGGCTTTATCCATCAGCTCCCTGGGCCTTCCCCGCAACCCACCTCGGGGATCTGAGGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
3UTR CCA 90 bp GGCCGAGGTGCAAACTTCTTCCCACAAGGAGTTCCAGGTGTTCAGTaGCAGCCAGTTCCTCAGTTAATGGGTCACCTGCTGCTGCGGCCA +
Preference number: 1 (lower is better)
Translates to: GRGANFFPQGVPGVQ*QPVPQLMGHLLLRP
Trigger: TGGCCGCAGCAGCAGGTGACCCATTAACTGAGGAACTGGCTGCCACTGAACACCTGGAACTCCTTGTGGGAAGAAGTTTGCACCTCGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585130.5
3UTR CCA 90 bp GTGCTTCCAGAGCCAGAGGAGATAGAGAGGACTCACCTCCCTATCTaGGCAGTCGAGAAGCTTCAGGAAGGACACAGGCTTACGCATTGC +
Preference number: 1 (lower is better)
Translates to: VLPEPEEIERTHLPI*AVEKLQEGHRLTHC
Trigger: GCAATGCGTAAGCCTGTGTCCTTCCTGAAGCTTCTCGACTGCCCAGATAGGGAGGTGAGTCCTCTCTATCTCCTCTGGCTCTGGAAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330889.8
3UTR CCA 90 bp CTGCTGTTCCTTCTCACTGGGGCAAGTGAGGACAAATCTCCGCTCTaGGGTGACAATGGTGAGTCCGGCTTTCCAGCGATTTCCTCGGAT +
Preference number: 1 (lower is better)
Translates to: LLFLLTGASEDKSPL*GDNGESGFPAISSD
Trigger: ATCCGAGGAAATCGCTGGAAAGCCGGACTCACCATTGTCACCCCAGAGCGGAGATTTGTCCTCACTTGCCCCAGTGAGAAGGAACAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585130.5
3UTR TCA 90 bp CATGATACACAAACAGGTTCCTGGTGTGGCCATCTCTCCTGTAGGTaGTCTGCAGCCCATGGGGGTGCCCTATCTTCTCTGTCTGGAAGG +
Preference number: 1 (lower is better)
Translates to: HDTQTGSWCGHLSCR*SAAHGGALSSLSGR
Trigger: CCTTCCAGACAGAGAAGATAGGGCACCCCCATGGGCTGCAGATCACCTACAGGAGAGATGGCCACACCAGGAACCTGTTTGTGTATCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000580526.1
ENST00000585130.5
3UTR TCA 90 bp GAGGCCTTCTCTTGCCAGAAGTACAAACTTCCTTCTCAGAAACTGTaGGTTGTCCCTTCCTCGCTTCCACAGGAATCCTTCTCGGTTACC +
Preference number: 1 (lower is better)
Translates to: EAFSCQKYKLPSQKL*VVPSSLPQESFSVT
Trigger: GGTAACCGAGAAGGATTCCTGTGGAAGCGAGGAAGGGACAACTCACAGTTTCTGAGAAGGAAGTTTGTACTTCTGGCAAGAGAAGGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580526.1
3UTR CCA 90 bp AGCCACGGAGAATCAGAGAGTCTCTTAAGAGACCTCCCAGCTCCTTaGGTCTCCATTGAAGCAAAGAGAGAACATCCAGTGTATTTCTGC +
Preference number: 1 (lower is better)
Translates to: SHGESESLLRDLPAP*VSIEAKREHPVYFC
Trigger: GCAGAAATACACTGGATGTTCTCTCTTTGCTTCAATGGAGACCCAAGGAGCTGGGAGGTCTCTTAAGAGACTCTCTGATTCTCCGTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
3UTR GCA 90 bp CCTTGGGTCTCCATTGAAGCAAAGAGAGAACATCCAGTGTATTTCTaGGTGGTGCTTGAAGACAGAGGAAAGGAACAACGAGTCACAGAG +
Preference number: 1 (lower is better)
Translates to: PWVSIEAKREHPVYF*VVLEDRGKEQRVTE
Trigger: CTCTGTGACTCGTTGTTCCTTTCCTCTGTCTTCAAGCACCACGCAGAAATACACTGGATGTTCTCTCTTTGCTTCAATGGAGACCCAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
3UTR GCA 90 bp ATCTGGGCAGTCGAGAAGCTTCAGGAAGGACACAGGCTTACGCATTaGTTATCCTTTGATTGGGGGATCCAAAGGAAAGTCCCATACAAT +
Preference number: 1 (lower is better)
Translates to: IWAVEKLQEGHRLTH*LSFDWGIQRKVPYN
Trigger: ATTGTATGGGACTTTCCTTTGGATCCCCCAATCAAAGGATAAGCAATGCGTAAGCCTGTGTCCTTCCTGAAGCTTCTCGACTGCCCAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330889.8
3UTR CCA 90 bp CACCCAACAGAGTTCACAGGTGGTCAAAGAGGCAGACAAGTAAACTaGCCCTTAATGCACAACCCAGCAAGTGTCCTTGAAAATGCACAT +
Preference number: 1 (lower is better)
Translates to: HPTEFTGGQRGRQVN*PLMHNPASVLENAH
Trigger: ATGTGCATTTTCAAGGACACTTGCTGGGTTGTGCATTAAGGGCCAGTTTACTTGTCTGCCTCTTTGACCACCTGTGAACTCTGTTGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330889.8
3UTR TCA 90 bp CGAGAAGCTTCAGGAAGGACACAGGCTTACGCATTGCTTATCCTTTaGTTGGGGGATCCAAAGGAAAGTCCCATACAATGCATAGATTTT +
Preference number: 1 (lower is better)
Translates to: REASGRTQAYALLIL*LGDPKESPIQCIDF
Trigger: AAAATCTATGCATTGTATGGGACTTTCCTTTGGATCCCCCAATCAAAGGATAAGCAATGCGTAAGCCTGTGTCCTTCCTGAAGCTTCTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330889.8
3UTR-3UTR TCA 90 bp TGTTCATCTATGCACCAGATCCTCAGATCCCCGAGGTGGGTTGCGGGGAAGGCCCTGACTGCGGGGCACTaGTGGTGGGCAGCCAGGGCC +
Preference number: 2 (lower is better)
Translates to: CSSMHQILRSPRWVAGKALTAGH*WWAARA
Trigger: GGCCCTGGCTGCCCACCATCAGTGCCCCGCAGTCAG...GGCCTTCCCCGCAACCCACCTCGGGGATCTGAGGATCTGGTGCATAGATGAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
3UTR-3UTR GCA 90 bp TTGCGGGGAAGGCCCAGGGAGCTGATGGATAAAGCCACAGCTTCAGTCCTGGCAATCCCCGAGGTGGGTTaGGGGGAAGGCCCAGGGAGC +
Preference number: 2 (lower is better)
Translates to: LRGRPRELMDKATASVLAIPEVG*GEGPGS
Trigger: GCTCCCTGGGCCTTCCCCGCAACCCACCTCGGGGAT...TGCCAGGACTGAAGCTGTGGCTTTATCCATCAGCTCCCTGGGCCTTCCCCGCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
3UTR-3UTR CCA 90 bp TGGTGGGCAGCCAGGGCCGAGGTGCAAACTTCTTCCCACAAGGAGTTCCAGGTGCTCAGATCCCCGAGGTaGGTTGCGGGGAAGGCCCAG +
Preference number: 2 (lower is better)
Translates to: WWAARAEVQTSSHKEFQVLRSPR*VAGKAQ
Trigger: CTGGGCCTTCCCCGCAACCCACCTCGGGGATCTGAG...CACCTGGAACTCCTTGTGGGAAGAAGTTTGCACCTCGGCCCTGGCTGCCCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
3UTR-3UTR TCA 90 bp AGGGAGCTGATGGATAAAGCCACAGCTTCAGTCCTGGCAGAGTTCACTGCCAGGCTGACTGCGGGGCACTaGTGGTGGGCAGCCAGGGCC +
Preference number: 2 (lower is better)
Translates to: RELMDKATASVLAEFTARLTAGH*WWAARA
Trigger: GGCCCTGGCTGCCCACCATCAGTGCCCCGCAGTCAG...CCTGGCAGTGAACTCTGCCAGGACTGAAGCTGTGGCTTTATCCATCAGCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
3UTR-3UTR GCA 90 bp CTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCTGCTGACTGCGGGGCACTGGGAATGGCTGCTGACTaGGGGGCACTGATGGTGGGC +
Preference number: 2 (lower is better)
Translates to: LQSWQSSLPGMAADCGALGMAAD*GALMVG
Trigger: GCCCACCATCAGTGCCCCGCAGTCAGCAGCCATTCC...CAGTGCCCCGCAGTCAGCAGCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
3UTR-3UTR CCA 90 bp TTGCGGGGAAGGCCCAGGGAGCTGATGGATAAAGCCACAGCTTCAGTCCTGGCACTCAGATCCCCGAGGTaGGTTGCGGGGAAGGCCCAG +
Preference number: 2 (lower is better)
Translates to: LRGRPRELMDKATASVLALRSPR*VAGKAQ
Trigger: CTGGGCCTTCCCCGCAACCCACCTCGGGGATCTGAG...TGCCAGGACTGAAGCTGTGGCTTTATCCATCAGCTCCCTGGGCCTTCCCCGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
3UTR-3UTR GCA 90 bp ATCTATGCACCAGATCCTCAGATCCCCGAGGTGGGTTGCGGGGAAGGCCCAGGGCAGCCAGGGCCGAGGTaGAAACTTCTTCCCACAAGG +
Preference number: 2 (lower is better)
Translates to: IYAPDPQIPEVGCGEGPGQPGPR*KLLPTR
Trigger: CCTTGTGGGAAGAAGTTTGCACCTCGGCCCTGGCTG...CCCTGGGCCTTCCCCGCAACCCACCTCGGGGATCTGAGGATCTGGTGCATAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
3UTR-3UTR GCA 90 bp TCCTGGCAGAGTTCACTGCCAGGAATGGCTGCTGACTGCGGGGCACTGATGGTGCAGCCAGGGCCGAGGTaGAAACTTCTTCCCACAAGG +
Preference number: 2 (lower is better)
Translates to: SWQSSLPGMAADCGALMVQPGPR*KLLPTR
Trigger: CCTTGTGGGAAGAAGTTTGCACCTCGGCCCTGGCTG...CACCATCAGTGCCCCGCAGTCAGCAGCCATTCCTGGCAGTGAACTCTGCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
3UTR-3UTR TCA 90 bp GGGATAGATGTTCATCTATGCACCAGATCCTCAGATCCCCGAGGTGGGTTGCGGGCCAGGAATGGCTGCTaGCTGCGGGGCACTGATGGT +
Preference number: 2 (lower is better)
Translates to: GIDVHLCTRSSDPRGGLRARNGC*LRGTDG
Trigger: ACCATCAGTGCCCCGCAGTCAGCAGCCATTCCTGGC...CCGCAACCCACCTCGGGGATCTGAGGATCTGGTGCATAGATGAACATCTATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
3UTR-3UTR TCA 90 bp TGGTGGGCAGCCAGGGCCGAGGTGCAAACTTCTTCCCACAAGGAGTTCCAGGTGGAAGGCCCAGGGAGCTaGTGGATAAAGCCACAGCTT +
Preference number: 2 (lower is better)
Translates to: WWAARAEVQTSSHKEFQVEGPGS*WIKPQL
Trigger: AAGCTGTGGCTTTATCCATCAGCTCCCTGGGCCTTC...CACCTGGAACTCCTTGTGGGAAGAAGTTTGCACCTCGGCCCTGGCTGCCCACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
3UTR-3UTR CCA 90 bp TGGTGGGCAGCCAGGGCCGAGGTGCAAACTTCTTCCCACAAGGAGTTCCAGGTGCCACAGCTTCAGTCCTaGCAGAGTTCACTGCCAGGA +
Preference number: 2 (lower is better)
Translates to: WWAARAEVQTSSHKEFQVPQLQS*QSSLPG
Trigger: TCCTGGCAGTGAACTCTGCCAGGACTGAAGCTGTGG...CACCTGGAACTCCTTGTGGGAAGAAGTTTGCACCTCGGCCCTGGCTGCCCACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
3UTR-3UTR TCA 90 bp GGGTCTCCATTGAAGCAAAGAGAGAACATCCAGTGTATTTCTGCGTGGTGCTTGCTGACTGCGGGGCACTaGTGGTGGGCAGCCAGGGCC +
Preference number: 2 (lower is better)
Translates to: GSPLKQRENIQCISAWCLLTAGH*WWAARA
Trigger: GGCCCTGGCTGCCCACCATCAGTGCCCCGCAGTCAG...CAAGCACCACGCAGAAATACACTGGATGTTCTCTCTTTGCTTCAATGGAGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
3UTR-3UTR GCA 90 bp TTGCGGGGAAGGCCCAGGGAGCTGATGGATAAAGCCACAGCTTCAGTCCTGGCAAGAAAAACCTGGCCCTaGTCGAAGGCATCCAGTGGG +
Preference number: 2 (lower is better)
Translates to: LRGRPRELMDKATASVLARKTWP*SKASSG
Trigger: CCCACTGGATGCCTTCGAGCAGGGCCAGGTTTTTCT...TGCCAGGACTGAAGCTGTGGCTTTATCCATCAGCTCCCTGGGCCTTCCCCGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585130.5
3UTR-3UTR CCA 90 bp ATCTATGCACCAGATCCTCAGATCCCCGAGGTGGGTTGCGGGGAAGGCCCAGGGGTTCCAGGTGTTCAGTaGCAGCCAGTTCCTCAGTTA +
Preference number: 2 (lower is better)
Translates to: IYAPDPQIPEVGCGEGPGVPGVQ*QPVPQL
Trigger: TAACTGAGGAACTGGCTGCCACTGAACACCTGGAAC...CCCTGGGCCTTCCCCGCAACCCACCTCGGGGATCTGAGGATCTGGTGCATAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
3UTR-3UTR CCA 90 bp GGTGGGCAGCCAGGGCCGAGGTGCAAACTTCTTCCCACAAGGAGTTCCAGGTGTGACCTCCCAGCTCCTTaGGTCTCCATTGAAGCAAAG +
Preference number: 2 (lower is better)
Translates to: GGQPGPRCKLLPTRSSRCDLPAP*VSIEAK
Trigger: CTTTGCTTCAATGGAGACCCAAGGAGCTGGGAGGTC...ACACCTGGAACTCCTTGTGGGAAGAAGTTTGCACCTCGGCCCTGGCTGCCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
3UTR-3UTR CCA 90 bp CACACCCAGCCACGGAGAATCAGAGAGTCTCTTAAGAGACCTCCCAGCTCCTTGAGCAGCCTCCGCTCATaGCAATCCAGGGCGAACCAC +
Preference number: 2 (lower is better)
Translates to: HTQPRRIRESLKRPPSSLSSLRS*QSRANH
Trigger: GTGGTTCGCCCTGGATTGCCATGAGCGGAGGCTGCT...CAAGGAGCTGGGAGGTCTCTTAAGAGACTCTCTGATTCTCCGTGGCTGGGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585130.5
3UTR-3UTR TCA 90 bp GGTGGGCAGCCAGGGCCGAGGTGCAAACTTCTTCCCACAAGGAGTTCCAGGTGTAAGATGCCACTTGCATaGTGCTGTGGGTGCCTTTTC +
Preference number: 2 (lower is better)
Translates to: GGQPGPRCKLLPTRSSRCKMPLA*CCGCLF
Trigger: GAAAAGGCACCCACAGCATCATGCAAGTGGCATCTT...ACACCTGGAACTCCTTGTGGGAAGAAGTTTGCACCTCGGCCCTGGCTGCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
3UTR-3UTR GCA 90 bp AGATGTTCATCTATGCACCAGATCCTCAGATCCCCGAGGTGGGTTGCGGGGAAGCAGCCAGGGCCGAGGTaGAAACTTCTTCCCACAAGG +
Preference number: 2 (lower is better)
Translates to: RCSSMHQILRSPRWVAGKQPGPR*KLLPTR
Trigger: CCTTGTGGGAAGAAGTTTGCACCTCGGCCCTGGCTG...CTTCCCCGCAACCCACCTCGGGGATCTGAGGATCTGGTGCATAGATGAACATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
3UTR-3UTR GCA 90 bp ATCTCTCCTGTAGGTGATCTGCAGCCCATGGGGGTGCCCTATCTTCTCTGTCTGCAGCCAGGGCCGAGGTaGAAACTTCTTCCCACAAGG +
Preference number: 2 (lower is better)
Translates to: ISPVGDLQPMGVPYLLCLQPGPR*KLLPTR
Trigger: CCTTGTGGGAAGAAGTTTGCACCTCGGCCCTGGCTG...CAGACAGAGAAGATAGGGCACCCCCATGGGCTGCAGATCACCTACAGGAGAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585130.5
3UTR-3UTR GCA 90 bp AAGCCACAGCTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCTGCTGACTGCCCTGGCAGAGTTCACTaGCAGGAATGGCTGCTGACT +
Preference number: 2 (lower is better)
Translates to: KPQLQSWQSSLPGMAADCPGRVH*QEWLLT
Trigger: AGTCAGCAGCCATTCCTGGCAGTGAACTCTGCCAGG...GCAGTCAGCAGCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAGCTGTGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
3UTR-3UTR CCA 90 bp AGCTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCTGCTGACTGCGGGGCACGTTCCAGGTGTTCAGTaGCAGCCAGTTCCTCAGTTA +
Preference number: 2 (lower is better)
Translates to: SFSPGRVHCQEWLLTAGHVPGVQ*QPVPQL
Trigger: TAACTGAGGAACTGGCTGCCACTGAACACCTGGAAC...GTGCCCCGCAGTCAGCAGCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
3UTR-3UTR CCA 90 bp AAGCCACAGCTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCTGCTGACTGCCCACAGCTTCAGTCCTaGCAGAGTTCACTGCCAGGA +
Preference number: 2 (lower is better)
Translates to: KPQLQSWQSSLPGMAADCPQLQS*QSSLPG
Trigger: TCCTGGCAGTGAACTCTGCCAGGACTGAAGCTGTGG...GCAGTCAGCAGCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAGCTGTGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
3UTR-3UTR TCA 90 bp TTAATGGGTCACCTGCTGCTGCGGCCACTCTCTGTTGATGCAGTAAGCCGGTTGCTGCACGGAGGGCATTaGACCAGTCCACTATCTCCT +
Preference number: 2 (lower is better)
Translates to: LMGHLLLRPLSVDAVSRLLHGGH*TSPLSP
Trigger: AGGAGATAGTGGACTGGTTCAATGCCCTCCGTGCAG...CAACCGGCTTACTGCATCAACAGAGAGTGGCCGCAGCAGCAGGTGACCCATTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585130.5
3UTR-3UTR GCA 90 bp AGGGAGCTGATGGATAAAGCCACAGCTTCAGTCCTGGCAGAGTTCACTGCCAGGCCTGGCAGAGTTCACTaGCAGGAATGGCTGCTGACT +
Preference number: 2 (lower is better)
Translates to: RELMDKATASVLAEFTARPGRVH*QEWLLT
Trigger: AGTCAGCAGCCATTCCTGGCAGTGAACTCTGCCAGG...CCTGGCAGTGAACTCTGCCAGGACTGAAGCTGTGGCTTTATCCATCAGCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
3UTR-3UTR GCA 90 bp CTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCTGCTGACTGCGGGGCACTGTTACAAGATGCCACTTaGATGATGCTGTGGGTGCCT +
Preference number: 2 (lower is better)
Translates to: LQSWQSSLPGMAADCGALLQDAT*MMLWVP
Trigger: AGGCACCCACAGCATCATGCAAGTGGCATCTTGTAA...CAGTGCCCCGCAGTCAGCAGCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
3UTR CAA 90 bp ATAGATGTTCATCTATGCACCAGATCCTCAGATCCCCGAGGTGGGTaGCGGGGAAGGCCCAGGGAGCTGATGGATAAAGCCACAGCTTCA +
Preference number: 2 (lower is better)
Translates to: IDVHLCTRSSDPRGG*RGRPRELMDKATAS
Trigger: TGAAGCTGTGGCTTTATCCATCAGCTCCCTGGGCCTTCCCCGCAACCCACCTCGGGGATCTGAGGATCTGGTGCATAGATGAACATCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
3UTR-3UTR TCA 90 bp CCAGGTGTTCAGTGGCAGCCAGTTCCTCAGTTAATGGGTCACCTGCTGCTGCGGTTTCTGCGTGGTGCTTaGAGACAGAGGAAAGGAACA +
Preference number: 2 (lower is better)
Translates to: PGVQWQPVPQLMGHLLLRFLRGA*RQRKGT
Trigger: TGTTCCTTTCCTCTGTCTTCAAGCACCACGCAGAAA...CCGCAGCAGCAGGTGACCCATTAACTGAGGAACTGGCTGCCACTGAACACCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585130.5
3UTR-3UTR GCA 90 bp TTGCGGGGAAGGCCCAGGGAGCTGATGGATAAAGCCACAGCTTCAGTCCTGGCATTACAAGATGCCACTTaGATGATGCTGTGGGTGCCT +
Preference number: 2 (lower is better)
Translates to: LRGRPRELMDKATASVLALQDAT*MMLWVP
Trigger: AGGCACCCACAGCATCATGCAAGTGGCATCTTGTAA...TGCCAGGACTGAAGCTGTGGCTTTATCCATCAGCTCCCTGGGCCTTCCCCGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
3UTR-3UTR CCA 90 bp ACACCCAACAGAGTTCACAGGTGGTCAAAGAGGCAGACAAGTAAACTGGCCCTTGTTCACTGCCAGGAATaGCTGCTGACTGCGGGGCAC +
Preference number: 2 (lower is better)
Translates to: TPNRVHRWSKRQTSKLALVHCQE*LLTAGH
Trigger: GTGCCCCGCAGTCAGCAGCCATTCCTGGCAGTGAAC...AAGGGCCAGTTTACTTGTCTGCCTCTTTGACCACCTGTGAACTCTGTTGGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330889.8
3UTR-3UTR CCA 90 bp ACAAATCTCCGCTCTGGGGTGACAATGGTGAGTCCGGCTTTCCAGCGATTTCCTGTGATCTGCAGCCCATaGGGGTGCCCTATCTTCTCT +
Preference number: 2 (lower is better)
Translates to: TNLRSGVTMVSPAFQRFPVICSP*GCPIFS
Trigger: AGAGAAGATAGGGCACCCCCATGGGCTGCAGATCAC...AGGAAATCGCTGGAAAGCCGGACTCACCATTGTCACCCCAGAGCGGAGATTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585130.5
3UTR-3UTR TCA 90 bp CAGATGTTTAGCAGAATGCCCCTAATGTGGATTTGTCTGATTATTTCCTCATGGCTGACTGCGGGGCACTaGTGGTGGGCAGCCAGGGCC +
Preference number: 2 (lower is better)
Translates to: QMFSRMPLMWICLIISSWLTAGH*WWAARA
Trigger: GGCCCTGGCTGCCCACCATCAGTGCCCCGCAGTCAG...CCATGAGGAAATAATCAGACAAATCCACATTAGGGGCATTCTGCTAAACATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000584828.5
ENST00000585130.5
3UTR-3UTR TCA 90 bp TGTATGGGGGAGGAGGGGATAGATGTTCATCTATGCACCAGATCCTCAGATCCCGAAGGCCCAGGGAGCTaGTGGATAAAGCCACAGCTT +
Preference number: 2 (lower is better)
Translates to: CMGEEGIDVHLCTRSSDPEGPGS*WIKPQL
Trigger: AAGCTGTGGCTTTATCCATCAGCTCCCTGGGCCTTC...GGGATCTGAGGATCTGGTGCATAGATGAACATCTATCCCCTCCTCCCCCATACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
3UTR-3UTR GCA 90 bp CTGGGTCAGATGTTTAGCAGAATGCCCCTAATGTGGATTTGTCTGATTATTTCCATCCCCGAGGTGGGTTaGGGGGAAGGCCCAGGGAGC +
Preference number: 2 (lower is better)
Translates to: LGQMFSRMPLMWICLIISIPEVG*GEGPGS
Trigger: GCTCCCTGGGCCTTCCCCGCAACCCACCTCGGGGAT...GGAAATAATCAGACAAATCCACATTAGGGGCATTCTGCTAAACATCTGACCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000584828.5
ENST00000585130.5
3UTR-3UTR CCA 90 bp TTGCGGGGAAGGCCCAGGGAGCTGATGGATAAAGCCACAGCTTCAGTCCTGGCACAGTGTATTTCTGCGTaGTGCTTGAAGACAGAGGAA +
Preference number: 2 (lower is better)
Translates to: LRGRPRELMDKATASVLAQCISA*CLKTEE
Trigger: TTCCTCTGTCTTCAAGCACCACGCAGAAATACACTG...TGCCAGGACTGAAGCTGTGGCTTTATCCATCAGCTCCCTGGGCCTTCCCCGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
3UTR-3UTR TCA 90 bp GGAGAATCAGAGAGTCTCTTAAGAGACCTCCCAGCTCCTTGGGTCTCCATTGAAGAAGGCCCAGGGAGCTaGTGGATAAAGCCACAGCTT +
Preference number: 2 (lower is better)
Translates to: GESESLLRDLPAPWVSIEEGPGS*WIKPQL
Trigger: AAGCTGTGGCTTTATCCATCAGCTCCCTGGGCCTTC...TTCAATGGAGACCCAAGGAGCTGGGAGGTCTCTTAAGAGACTCTCTGATTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
3UTR-3UTR TCA 90 bp CACACCCAGCCACGGAGAATCAGAGAGTCTCTTAAGAGACCTCCCAGCTCCTTGCCTCCATTTCAGATGTaGGAAAGTTCTGGGCCTGTA +
Preference number: 2 (lower is better)
Translates to: HTQPRRIRESLKRPPSSLPPFQM*ESSGPV
Trigger: TACAGGCCCAGAACTTTCTCACATCTGAAATGGAGG...CAAGGAGCTGGGAGGTCTCTTAAGAGACTCTCTGATTCTCCGTGGCTGGGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
3UTR-3UTR TCA 90 bp GACAAATCTCCGCTCTGGGGTGACAATGGTGAGTCCGGCTTTCCAGCGATTTCCCCTCCATTTCAGATGTaGGAAAGTTCTGGGCCTGTA +
Preference number: 2 (lower is better)
Translates to: DKSPLWGDNGESGFPAISPPFQM*ESSGPV
Trigger: TACAGGCCCAGAACTTTCTCACATCTGAAATGGAGG...GGAAATCGCTGGAAAGCCGGACTCACCATTGTCACCCCAGAGCGGAGATTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585130.5
3UTR-3UTR GCA 90 bp ACACCCAACAGAGTTCACAGGTGGTCAAAGAGGCAGACAAGTAAACTGGCCCTTCCTGGCAGAGTTCACTaGCAGGAATGGCTGCTGACT +
Preference number: 2 (lower is better)
Translates to: TPNRVHRWSKRQTSKLALPGRVH*QEWLLT
Trigger: AGTCAGCAGCCATTCCTGGCAGTGAACTCTGCCAGG...AAGGGCCAGTTTACTTGTCTGCCTCTTTGACCACCTGTGAACTCTGTTGGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330889.8
3UTR-3UTR GCA 90 bp ACACCCAACAGAGTTCACAGGTGGTCAAAGAGGCAGACAAGTAAACTGGCCCTTTGGTCTCAATCCTCCTaGCTCAGCTTCCCAAAGGGC +
Preference number: 2 (lower is better)
Translates to: TPNRVHRWSKRQTSKLALWSQSS*LSFPKG
Trigger: GCCCTTTGGGAAGCTGAGGCAGGAGGATTGAGACCA...AAGGGCCAGTTTACTTGTCTGCCTCTTTGACCACCTGTGAACTCTGTTGGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330889.8
3UTR-3UTR GCA 90 bp AAGCCACAGCTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCTGCTGACTGCGCCTTTTCATTGCAATaGCTCCATTTCAGATGTGAG +
Preference number: 2 (lower is better)
Translates to: KPQLQSWQSSLPGMAADCAFSLQ*LHFRCE
Trigger: CTCACATCTGAAATGGAGGCATTGCAATGAAAAGGC...GCAGTCAGCAGCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAGCTGTGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
3UTR-3UTR GCA 90 bp TTAATGGGTCACCTGCTGCTGCGGCCACTCTCTGTTGATGCAGTAAGCCGGTTGGAGCAGGGGACTTGGTaGTCTGTTTCTCTAACATTT +
Preference number: 2 (lower is better)
Translates to: LMGHLLLRPLSVDAVSRLEQGTW*SVSLTF
Trigger: AAATGTTAGAGAAACAGAGCACCAAGTCCCCTGCTC...CAACCGGCTTACTGCATCAACAGAGAGTGGCCGCAGCAGCAGGTGACCCATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585130.5
3UTR-3UTR CCA 90 bp GGGTCTCCATTGAAGCAAAGAGAGAACATCCAGTGTATTTCTGCGTGGTGCTTGCCACAGCTTCAGTCCTaGCAGAGTTCACTGCCAGGA +
Preference number: 2 (lower is better)
Translates to: GSPLKQRENIQCISAWCLPQLQS*QSSLPG
Trigger: TCCTGGCAGTGAACTCTGCCAGGACTGAAGCTGTGG...CAAGCACCACGCAGAAATACACTGGATGTTCTCTCTTTGCTTCAATGGAGACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
3UTR CAA 90 bp CCTTCTCTTGCCAGAAGTACAAACTTCCTTCTCAGAAACTGTGAGTaGTCCCTTCCTCGCTTCCACAGGAATCCTTCTCGGTTACCTGGG +
Preference number: 2 (lower is better)
Translates to: PSLARSTNFLLRNCE*SLPRFHRNPSRLPG
Trigger: CCCAGGTAACCGAGAAGGATTCCTGTGGAAGCGAGGAAGGGACAACTCACAGTTTCTGAGAAGGAAGTTTGTACTTCTGGCAAGAGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580526.1
3UTR-3UTR TCA 90 bp AAGCCACAGCTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCTGCTGACTGCTTCACTCTTCATTTTTaGAGAGTCTGGGTCAGATGT +
Preference number: 2 (lower is better)
Translates to: KPQLQSWQSSLPGMAADCFTLHF*RVWVRC
Trigger: ACATCTGACCCAGACTCTTCAAAAATGAAGAGTGAA...GCAGTCAGCAGCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAGCTGTGGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000584828.5
ENST00000585130.5
3UTR-3UTR TCA 90 bp CTGGAATGCAATGGCGCAATCTCACTGCGCCCGGCCATTGACTACTTTATCTTTCCTTCTCAGAAACTGTaGGTTGTCCCTTCCTCGCTT +
Preference number: 2 (lower is better)
Translates to: LECNGAISLRPAIDYFIFPSQKL*VVPSSL
Trigger: AAGCGAGGAAGGGACAACTCACAGTTTCTGAGAAGG...AAAGATAAAGTAGTCAATGGCCGGGCGCAGTGAGATTGCGCCATTGCATTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585130.5
3UTR-3UTR GCA 90 bp GATGCCCTTGGGCAGGTCTTCGTAGGCTTCATATCCCTGCTCCTTGTTCCCAAGATAGATGTTCATCTATaGACCAGATCCTCAGATCCC +
Preference number: 2 (lower is better)
Translates to: DALGQVFVGFISLLLVPKIDVHL*TRSSDP
Trigger: GGGATCTGAGGATCTGGTGCATAGATGAACATCTAT...CTTGGGAACAAGGAGCAGGGATATGAAGCCTACGAAGACCTGCCCAAGGGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585130.5
3UTR-3UTR GCA 90 bp AAATCTCCGCTCTGGGGTGACAATGGTGAGTCCGGCTTTCCAGCGATTTCCTCGTGGGTGCCTTTTCATTaGAATGCCTCCATTTCAGAT +
Preference number: 2 (lower is better)
Translates to: KSPLWGDNGESGFPAISSWVPFH*NASISD
Trigger: ATCTGAAATGGAGGCATTGCAATGAAAAGGCACCCA...CGAGGAAATCGCTGGAAAGCCGGACTCACCATTGTCACCCCAGAGCGGAGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585130.5
3UTR-3UTR GCA 90 bp GTGTATGGGGGAGGAGGGGATAGATGTTCATCTATGCACCAGATCCTCAGATCCCAGGAGGCCTTCTCTTaGCAGAAGTACAAACTTCCT +
Preference number: 2 (lower is better)
Translates to: VYGGGGDRCSSMHQILRSQEAFS*QKYKLP
Trigger: AGGAAGTTTGTACTTCTGGCAAGAGAAGGCCTCCTG...GGATCTGAGGATCTGGTGCATAGATGAACATCTATCCCCTCCTCCCCCATACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585130.5
3UTR-3UTR CCA 90 bp AAGACAGAGGAAAGGAACAACGAGTCACAGAGCAGGGGACTTGGTGCTCTGTTTGTTCCAGGTGTTCAGTaGCAGCCAGTTCCTCAGTTA +
Preference number: 2 (lower is better)
Translates to: KTEERNNESQSRGLGALFVPGVQ*QPVPQL
Trigger: TAACTGAGGAACTGGCTGCCACTGAACACCTGGAAC...AAACAGAGCACCAAGTCCCCTGCTCTGTGACTCGTTGTTCCTTTCCTCTGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
3UTR-3UTR CCA 90 bp GGAGAATCAGAGAGTCTCTTAAGAGACCTCCCAGCTCCTTGGGTCTCCATTGAAACACAAACAGGTTCCTaGTGTGGCCATCTCTCCTGT +
Preference number: 2 (lower is better)
Translates to: GESESLLRDLPAPWVSIETQTGS*CGHLSC
Trigger: ACAGGAGAGATGGCCACACCAGGAACCTGTTTGTGT...TTCAATGGAGACCCAAGGAGCTGGGAGGTCTCTTAAGAGACTCTCTGATTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585130.5
3UTR-3UTR CCA 90 bp GGGTCTCCATTGAAGCAAAGAGAGAACATCCAGTGTATTTCTGCGTGGTGCTTGCACGAGCTCAGACTCTaGGAGTTCAGGAAAGGCCAT +
Preference number: 2 (lower is better)
Translates to: GSPLKQRENIQCISAWCLHELRL*EFRKGH
Trigger: ATGGCCTTTCCTGAACTCCCAGAGTCTGAGCTCGTG...CAAGCACCACGCAGAAATACACTGGATGTTCTCTCTTTGCTTCAATGGAGACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585130.5
3UTR-3UTR TCA 90 bp AGCCACGGAGAATCAGAGAGTCTCTTAAGAGACCTCCCAGCTCCTTGGGTCTCCTTCACTCTTCATTTTTaGAGAGTCTGGGTCAGATGT +
Preference number: 2 (lower is better)
Translates to: SHGESESLLRDLPAPWVSFTLHF*RVWVRC
Trigger: ACATCTGACCCAGACTCTTCAAAAATGAAGAGTGAA...GGAGACCCAAGGAGCTGGGAGGTCTCTTAAGAGACTCTCTGATTCTCCGTGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
3UTR-3UTR TCA 90 bp AGGGAGCTGATGGATAAAGCCACAGCTTCAGTCCTGGCAGAGTTCACTGCCAGGTTCACTCTTCATTTTTaGAGAGTCTGGGTCAGATGT +
Preference number: 2 (lower is better)
Translates to: RELMDKATASVLAEFTARFTLHF*RVWVRC
Trigger: ACATCTGACCCAGACTCTTCAAAAATGAAGAGTGAA...CCTGGCAGTGAACTCTGCCAGGACTGAAGCTGTGGCTTTATCCATCAGCTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000584828.5
ENST00000585130.5
3UTR-3UTR TCA 90 bp TATCTGGGCAGTCGAGAAGCTTCAGGAAGGACACAGGCTTACGCATTGCTTATCTCCTTGGGTCTCCATTaGAGCAAAGAGAGAACATCC +
Preference number: 2 (lower is better)
Translates to: YLGSREASGRTQAYALLISLGLH*SKERTS
Trigger: GGATGTTCTCTCTTTGCTTCAATGGAGACCCAAGGA...GATAAGCAATGCGTAAGCCTGTGTCCTTCCTGAAGCTTCTCGACTGCCCAGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330889.8
3UTR-3UTR CCA 90 bp AATGCAATGGCGCAATCTCACTGCGCCCGGCCATTGACTACTTTATCTTTCACTGTTCCAGGTGTTCAGTaGCAGCCAGTTCCTCAGTTA +
Preference number: 2 (lower is better)
Translates to: NAMAQSHCARPLTTLSFTVPGVQ*QPVPQL
Trigger: TAACTGAGGAACTGGCTGCCACTGAACACCTGGAAC...AGTGAAAGATAAAGTAGTCAATGGCCGGGCGCAGTGAGATTGCGCCATTGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
3UTR-3UTR CCA 90 bp AAGCCACAGCTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCTGCTGACTGCAGAATGCCCCTAATGTaGATTTGTCTGATTATTTCC +
Preference number: 2 (lower is better)
Translates to: KPQLQSWQSSLPGMAADCRMPLM*ICLIIS
Trigger: GGAAATAATCAGACAAATCCACATTAGGGGCATTCT...GCAGTCAGCAGCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAGCTGTGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000584828.5
ENST00000585130.5
3UTR CAA 90 bp CCATTGAAGCAAAGAGAGAACATCCAGTGTATTTCTGCGTGGTGCTaGAAGACAGAGGAAAGGAACAACGAGTCACAGAGCAGGGGACTT +
Preference number: 2 (lower is better)
Translates to: PLKQRENIQCISAWC*KTEERNNESQSRGL
Trigger: AAGTCCCCTGCTCTGTGACTCGTTGTTCCTTTCCTCTGTCTTCAAGCACCACGCAGAAATACACTGGATGTTCTCTCTTTGCTTCAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
3UTR-3UTR TCA 90 bp GGCAGACAAGTAAACTGGCCCTTAATGCACAACCCAGCAAGTGTCCTTGAAAATTTTCTGCGTGGTGCTTaGAGACAGAGGAAAGGAACA +
Preference number: 2 (lower is better)
Translates to: GRQVNWPLMHNPASVLENFLRGA*RQRKGT
Trigger: TGTTCCTTTCCTCTGTCTTCAAGCACCACGCAGAAA...ATTTTCAAGGACACTTGCTGGGTTGTGCATTAAGGGCCAGTTTACTTGTCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330889.8
3UTR CAA 90 bp TCACTGCGCCCGGCCATTGACTACTTTATCTTTCACTCTTCATTTTaGAAGAGTCTGGGTCAGATGTTTAGCAGAATGCCCCTAATGTGG +
Preference number: 2 (lower is better)
Translates to: SLRPAIDYFIFHSSF*KSLGQMFSRMPLMW
Trigger: CCACATTAGGGGCATTCTGCTAAACATCTGACCCAGACTCTTCAAAAATGAAGAGTGAAAGATAAAGTAGTCAATGGCCGGGCGCAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
3UTR CAA 90 bp TCGAGAAGCTTCAGGAAGGACACAGGCTTACGCATTGCTTATCCTTaGATTGGGGGATCCAAAGGAAAGTCCCATACAATGCATAGATTT +
Preference number: 2 (lower is better)
Translates to: SRSFRKDTGLRIAYP*IGGSKGKSHTMHRF
Trigger: AAATCTATGCATTGTATGGGACTTTCCTTTGGATCCCCCAATCAAAGGATAAGCAATGCGTAAGCCTGTGTCCTTCCTGAAGCTTCTCGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330889.8
3UTR-3UTR TCA 90 bp CTGGGTCAGATGTTTAGCAGAATGCCCCTAATGTGGATTTGTCTGATTATTTCCCCTCCATTTCAGATGTaGGAAAGTTCTGGGCCTGTA +
Preference number: 2 (lower is better)
Translates to: LGQMFSRMPLMWICLIISPPFQM*ESSGPV
Trigger: TACAGGCCCAGAACTTTCTCACATCTGAAATGGAGG...GGAAATAATCAGACAAATCCACATTAGGGGCATTCTGCTAAACATCTGACCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000584828.5
ENST00000585130.5
3UTR-3UTR GCA 90 bp CTGGGTCAGATGTTTAGCAGAATGCCCCTAATGTGGATTTGTCTGATTATTTCCTTACAAGATGCCACTTaGATGATGCTGTGGGTGCCT +
Preference number: 2 (lower is better)
Translates to: LGQMFSRMPLMWICLIISLQDAT*MMLWVP
Trigger: AGGCACCCACAGCATCATGCAAGTGGCATCTTGTAA...GGAAATAATCAGACAAATCCACATTAGGGGCATTCTGCTAAACATCTGACCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000584828.5
ENST00000585130.5
3UTR-3UTR CCA 90 bp GGCAGACAAGTAAACTGGCCCTTAATGCACAACCCAGCAAGTGTCCTTGAAAATACTTGCATGATGCTGTaGGTGCCTTTTCATTGCAAT +
Preference number: 2 (lower is better)
Translates to: GRQVNWPLMHNPASVLENTCMML*VPFHCN
Trigger: ATTGCAATGAAAAGGCACCCACAGCATCATGCAAGT...ATTTTCAAGGACACTTGCTGGGTTGTGCATTAAGGGCCAGTTTACTTGTCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330889.8
3UTR-3UTR CCA 90 bp CTGGGTCAGATGTTTAGCAGAATGCCCCTAATGTGGATTTGTCTGATTATTTCCACAGAGCAGGGGACTTaGTGCTCTGTTTCTCTAACA +
Preference number: 2 (lower is better)
Translates to: LGQMFSRMPLMWICLIISTEQGT*CSVSLT
Trigger: TGTTAGAGAAACAGAGCACCAAGTCCCCTGCTCTGT...GGAAATAATCAGACAAATCCACATTAGGGGCATTCTGCTAAACATCTGACCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
3UTR-3UTR GCA 90 bp TTAGGACTTTATCTCTTGTGTCTGTTCTTTCCCACCCTTAGAATCCCAGTTGGCATAGATGTTCATCTATaGACCAGATCCTCAGATCCC +
Preference number: 2 (lower is better)
Translates to: LGLYLLCLFFPTLRIPVGIDVHL*TRSSDP
Trigger: GGGATCTGAGGATCTGGTGCATAGATGAACATCTAT...GCCAACTGGGATTCTAAGGGTGGGAAAGAACAGACACAAGAGATAAAGTCCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330889.8
3UTR-3UTR GCA 90 bp CTGGGTCAGATGTTTAGCAGAATGCCCCTAATGTGGATTTGTCTGATTATTTCCTGGGTGCCTTTTCATTaGAATGCCTCCATTTCAGAT +
Preference number: 2 (lower is better)
Translates to: LGQMFSRMPLMWICLIISWVPFH*NASISD
Trigger: ATCTGAAATGGAGGCATTGCAATGAAAAGGCACCCA...GGAAATAATCAGACAAATCCACATTAGGGGCATTCTGCTAAACATCTGACCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000584828.5
ENST00000585130.5
3UTR-3UTR GCA 90 bp CAGATGTTTAGCAGAATGCCCCTAATGTGGATTTGTCTGATTATTTCCTCATGGGCCTTTTCATTGCAATaGCTCCATTTCAGATGTGAG +
Preference number: 2 (lower is better)
Translates to: QMFSRMPLMWICLIISSWAFSLQ*LHFRCE
Trigger: CTCACATCTGAAATGGAGGCATTGCAATGAAAAGGC...CCATGAGGAAATAATCAGACAAATCCACATTAGGGGCATTCTGCTAAACATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000584828.5
ENST00000585130.5
3UTR-3UTR CCA 90 bp CAGATGTTTAGCAGAATGCCCCTAATGTGGATTTGTCTGATTATTTCCTCATGGTGCTTATCCTTTGATTaGGGGATCCAAAGGAAAGTC +
Preference number: 2 (lower is better)
Translates to: QMFSRMPLMWICLIISSWCLSFD*GIQRKV
Trigger: GACTTTCCTTTGGATCCCCCAATCAAAGGATAAGCA...CCATGAGGAAATAATCAGACAAATCCACATTAGGGGCATTCTGCTAAACATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330889.8
3UTR-3UTR CCA 90 bp CTGGGTCAGATGTTTAGCAGAATGCCCCTAATGTGGATTTGTCTGATTATTTCCAGAATGCCCCTAATGTaGATTTGTCTGATTATTTCC +
Preference number: 2 (lower is better)
Translates to: LGQMFSRMPLMWICLIISRMPLM*ICLIIS
Trigger: GGAAATAATCAGACAAATCCACATTAGGGGCATTCT...GGAAATAATCAGACAAATCCACATTAGGGGCATTCTGCTAAACATCTGACCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000584828.5
ENST00000585130.5
3UTR-3UTR CAA 90 bp AGGGAGCTGATGGATAAAGCCACAGCTTCAGTCCTGGCAGAGTTCACTGCCAGGGATGCAGTAAGCCGGTaGAGGGGCGTCAAGGGGCTG +
Preference number: 3 (lower is better)
Translates to: RELMDKATASVLAEFTARDAVSR*RGVKGL
Trigger: CAGCCCCTTGACGCCCCTCAACCGGCTTACTGCATC...CCTGGCAGTGAACTCTGCCAGGACTGAAGCTGTGGCTTTATCCATCAGCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585130.5
3UTR GCA 72 bp CCCAGGCTCTTCTCGAACTCCTGGTCTCAATCCTCCTaGCTCAGCTTCCCAAAGGGCTGGGATTATGGGCAT +
Preference number: 3 (lower is better)
Translates to: PRLFSNSWSQSS*LSFPKGWDYGH
Trigger: ATGCCCATAATCCCAGCCCTTTGGGAAGCTGAGGCAGGAGGATTGAGACCAGGAGTTCGAGAAGAGCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
3UTR-3UTR CAA 90 bp CTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCTGCTGACTGCGGGGCACTGCTCCTTGGGTCTCCATaGAAGCAAAGAGAGAACATC +
Preference number: 3 (lower is better)
Translates to: LQSWQSSLPGMAADCGALLLGSP*KQRENI
Trigger: GATGTTCTCTCTTTGCTTCAATGGAGACCCAAGGAG...CAGTGCCCCGCAGTCAGCAGCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
3UTR-3UTR CAA 90 bp CCCTGCTCCTTGTTCCCAAGAAAAACCTGGCCCTGCTCGAAGGCATCCAGTGGGATGCTGATGACAGCTTaGGGGCTTTTACCCTGTTCC +
Preference number: 3 (lower is better)
Translates to: PCSLFPRKTWPCSKASSGMLMTA*GLLPCS
Trigger: GGAACAGGGTAAAAGCCCCAAAGCTGTCATCAGCAT...CCCACTGGATGCCTTCGAGCAGGGCCAGGTTTTTCTTGGGAACAAGGAGCAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000585130.5
3UTR CCA 72 bp GAGCCAGAGGAGATAGAGAGGACTCACCTCCCTATCTaGGCAGTCGAGAAGCTTCAGGAAGGACACAGGCTT +
Preference number: 3 (lower is better)
Translates to: EPEEIERTHLPI*AVEKLQEGHRL
Trigger: AAGCCTGTGTCCTTCCTGAAGCTTCTCGACTGCCCAGATAGGGAGGTGAGTCCTCTCTATCTCCTCTGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330889.8
3UTR CCA 72 bp CTTCTCACTGGGGCAAGTGAGGACAAATCTCCGCTCTaGGGTGACAATGGTGAGTCCGGCTTTCCAGCGATT +
Preference number: 3 (lower is better)
Translates to: LLTGASEDKSPL*GDNGESGFPAI
Trigger: AATCGCTGGAAAGCCGGACTCACCATTGTCACCCCAGAGCGGAGATTTGTCCTCACTTGCCCCAGTGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585130.5
3UTR-3UTR CAA 90 bp GACAAATCTCCGCTCTGGGGTGACAATGGTGAGTCCGGCTTTCCAGCGATTTCCCTCAGAAACTGTGAGTaGTCCCTTCCTCGCTTCCAC +
Preference number: 3 (lower is better)
Translates to: DKSPLWGDNGESGFPAISLRNCE*SLPRFH
Trigger: GTGGAAGCGAGGAAGGGACAACTCACAGTTTCTGAG...GGAAATCGCTGGAAAGCCGGACTCACCATTGTCACCCCAGAGCGGAGATTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585130.5
3UTR TCA 72 bp CTCACTCTGTCACCCAGGCTAAGTAAAGTGGTGCAATaGGGGGTCACTGTAGCCATGACCTCCCTGGCTCAA +
Preference number: 3 (lower is better)
Translates to: LTLSPRLSKVVQ*GVTVAMTSLAQ
Trigger: TTGAGCCAGGGAGGTCATGGCTACAGTGACCCCTCATTGCACCACTTTACTTAGCCTGGGTGACAGAGTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330889.8
3UTR CCA 72 bp ATCTGCAGCCCATGGGGGTGCCCTATCTTCTCTGTCTaGAAGGTGGCATTCAAGTCCTTAATGCTGATGACA +
Preference number: 3 (lower is better)
Translates to: ICSPWGCPIFSV*KVAFKSLMLMT
Trigger: TGTCATCAGCATTAAGGACTTGAATGCCACCTTCCAGACAGAGAAGATAGGGCACCCCCATGGGCTGCAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000580526.1
ENST00000585130.5
3UTR-3UTR CAA 90 bp AGGGAGCTGATGGATAAAGCCACAGCTTCAGTCCTGGCAGAGTTCACTGCCAGGTTTCACTCTTCATTTTaGAAGAGTCTGGGTCAGATG +
Preference number: 3 (lower is better)
Translates to: RELMDKATASVLAEFTARFHSSF*KSLGQM
Trigger: CATCTGACCCAGACTCTTCAAAAATGAAGAGTGAAA...CCTGGCAGTGAACTCTGCCAGGACTGAAGCTGTGGCTTTATCCATCAGCTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000584828.5
ENST00000585130.5
3UTR GCA 72 bp CACTTGCATGATGCTGTGGGTGCCTTTTCATTGCAATaGCTCCATTTCAGATGTGAGAAAGTTCTGGGCCTG +
Preference number: 3 (lower is better)
Translates to: HLHDAVGAFSLQ*LHFRCEKVLGL
Trigger: CAGGCCCAGAACTTTCTCACATCTGAAATGGAGGCATTGCAATGAAAAGGCACCCACAGCATCATGCAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
3UTR GCA 72 bp GTCGAGAAGCTTCAGGAAGGACACAGGCTTACGCATTaGTTATCCTTTGATTGGGGGATCCAAAGGAAAGTC +
Preference number: 3 (lower is better)
Translates to: VEKLQEGHRLTH*LSFDWGIQRKV
Trigger: GACTTTCCTTTGGATCCCCCAATCAAAGGATAAGCAATGCGTAAGCCTGTGTCCTTCCTGAAGCTTCTCGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330889.8
3UTR CCA 72 bp GAATCAGAGAGTCTCTTAAGAGACCTCCCAGCTCCTTaGGTCTCCATTGAAGCAAAGAGAGAACATCCAGTG +
Preference number: 3 (lower is better)
Translates to: ESESLLRDLPAP*VSIEAKREHPV
Trigger: CACTGGATGTTCTCTCTTTGCTTCAATGGAGACCCAAGGAGCTGGGAGGTCTCTTAAGAGACTCTCTGATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
3UTR CCA 72 bp GAGTTCACAGGTGGTCAAAGAGGCAGACAAGTAAACTaGCCCTTAATGCACAACCCAGCAAGTGTCCTTGAA +
Preference number: 3 (lower is better)
Translates to: EFTGGQRGRQVN*PLMHNPASVLE
Trigger: TTCAAGGACACTTGCTGGGTTGTGCATTAAGGGCCAGTTTACTTGTCTGCCTCTTTGACCACCTGTGAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330889.8
3UTR-3UTR CAA 90 bp ACAGGCTTACGCATTGCTTATCCTTTGATTGGGGGATCCAAAGGAAAGTCCCATATTTCTGCGTGGTGCTaGAAGACAGAGGAAAGGAAC +
Preference number: 3 (lower is better)
Translates to: TGLRIAYPLIGGSKGKSHISAWC*KTEERN
Trigger: GTTCCTTTCCTCTGTCTTCAAGCACCACGCAGAAAT...ATGGGACTTTCCTTTGGATCCCCCAATCAAAGGATAAGCAATGCGTAAGCCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330889.8
3UTR TCA 72 bp TCTCTTAAGAGACCTCCCAGCTCCTTGGGTCTCCATTaGAGCAAAGAGAGAACATCCAGTGTATTTCTGCGT +
Preference number: 3 (lower is better)
Translates to: SLKRPPSSLGLH*SKERTSSVFLR
Trigger: ACGCAGAAATACACTGGATGTTCTCTCTTTGCTTCAATGGAGACCCAAGGAGCTGGGAGGTCTCTTAAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
3UTR TCA 72 bp TCAGGAAGGACACAGGCTTACGCATTGCTTATCCTTTaGTTGGGGGATCCAAAGGAAAGTCCCATACAATGC +
Preference number: 3 (lower is better)
Translates to: SGRTQAYALLIL*LGDPKESPIQC
Trigger: GCATTGTATGGGACTTTCCTTTGGATCCCCCAATCAAAGGATAAGCAATGCGTAAGCCTGTGTCCTTCCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330889.8
3UTR TCA 72 bp GGAATGCAATGGCGCAATCTCACTGCGCCCGGCCATTaGCTACTTTATCTTTCACTCTTCATTTTTGAAGAG +
Preference number: 3 (lower is better)
Translates to: GMQWRNLTAPGH*LLYLSLFIFEE
Trigger: CTCTTCAAAAATGAAGAGTGAAAGATAAAGTAGTCAATGGCCGGGCGCAGTGAGATTGCGCCATTGCATTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
3UTR TCA 72 bp AAAGAGAGAACATCCAGTGTATTTCTGCGTGGTGCTTaGAGACAGAGGAAAGGAACAACGAGTCACAGAGCA +
Preference number: 3 (lower is better)
Translates to: KERTSSVFLRGA*RQRKGTTSHRA
Trigger: TGCTCTGTGACTCGTTGTTCCTTTCCTCTGTCTTCAAGCACCACGCAGAAATACACTGGATGTTCTCTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
3UTR GCA 72 bp TCCATTGAAGCAAAGAGAGAACATCCAGTGTATTTCTaGGTGGTGCTTGAAGACAGAGGAAAGGAACAACGA +
Preference number: 3 (lower is better)
Translates to: SIEAKREHPVYF*VVLEDRGKEQR
Trigger: TCGTTGTTCCTTTCCTCTGTCTTCAAGCACCACGCAGAAATACACTGGATGTTCTCTCTTTGCTTCAATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
3UTR CCA 72 bp AGTCTGGGTCAGATGTTTAGCAGAATGCCCCTAATGTaGATTTGTCTGATTATTTCCTCATGGTTAGATTCA +
Preference number: 3 (lower is better)
Translates to: SLGQMFSRMPLM*ICLIISSWLDS
Trigger: TGAATCTAACCATGAGGAAATAATCAGACAAATCCACATTAGGGGCATTCTGCTAAACATCTGACCCAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000584828.5
ENST00000585130.5
CDS-3UTR TCA 90 bp TCTATGCACCAGATCCTCAGATCCCCGAGGTGGGTTGCGGGGAAGGCCCAGGGACTGACTGCGGGGCACTaGTGGTGGGCAGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SMHQILRSPRWVAGKAQGLTAGH*WWAARA
Trigger: GGCCCTGGCTGCCCACCATCAGTGCCCCGCAGTCAG...TCCCTGGGCCTTCCCCGCAACCCACCTCGGGGATCTGAGGATCTGGTGCATAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR GCA 90 bp TCTATGCACCAGATCCTCAGATCCCCGAGGTGGGTTGCGGGGAAGGCCCAGGGACCGCAGTCGGCGCAGTaGGCGTTGCCTGTGTCCGGC +
Preference number: 4 (lower is better)
Translates to: SMHQILRSPRWVAGKAQGPQSAQ*ALPVSG
Trigger: GCCGGACACAGGCAACGCGCACTGCGCCGACTGCGG...TCCCTGGGCCTTCCCCGCAACCCACCTCGGGGATCTGAGGATCTGGTGCATAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000585130.5
CDS-3UTR TCA 90 bp CACAGCTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCTGCTGACTGCGGGGCTGACTGCGGGGCACTaGTGGTGGGCAGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: HSFSPGRVHCQEWLLTAGLTAGH*WWAARA
Trigger: GGCCCTGGCTGCCCACCATCAGTGCCCCGCAGTCAG...CCCCGCAGTCAGCAGCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAGCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR TCA 90 bp TGGTGGGCAGCCAGGGCCGAGGTGCAAACTTCTTCCCACAAGGAGTTCCAGGTGCTGACTGCGGGGCACTaGTGGTGGGCAGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: WWAARAEVQTSSHKEFQVLTAGH*WWAARA
Trigger: GGCCCTGGCTGCCCACCATCAGTGCCCCGCAGTCAG...CACCTGGAACTCCTTGTGGGAAGAAGTTTGCACCTCGGCCCTGGCTGCCCACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR GCA 90 bp AGCTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCTGCTGACTGCGGGGCACCCGCAGTCGGCGCAGTaGGCGTTGCCTGTGTCCGGC +
Preference number: 4 (lower is better)
Translates to: SFSPGRVHCQEWLLTAGHPQSAQ*ALPVSG
Trigger: GCCGGACACAGGCAACGCGCACTGCGCCGACTGCGG...GTGCCCCGCAGTCAGCAGCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000585130.5
CDS-3UTR GCA 90 bp ATCTATGCACCAGATCCTCAGATCCCCGAGGTGGGTTGCGGGGAAGGCCCAGGGATCCCCGAGGTGGGTTaGGGGGAAGGCCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: IYAPDPQIPEVGCGEGPGIPEVG*GEGPGS
Trigger: GCTCCCTGGGCCTTCCCCGCAACCCACCTCGGGGAT...CCCTGGGCCTTCCCCGCAACCCACCTCGGGGATCTGAGGATCTGGTGCATAGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR GCA 90 bp TCTATGCACCAGATCCTCAGATCCCCGAGGTGGGTTGCGGGGAAGGCCCAGGGAATCCCCGAGGTGGGTTaGGGGGAAGGCCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: SMHQILRSPRWVAGKAQGIPEVG*GEGPGS
Trigger: GCTCCCTGGGCCTTCCCCGCAACCCACCTCGGGGAT...TCCCTGGGCCTTCCCCGCAACCCACCTCGGGGATCTGAGGATCTGGTGCATAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR GCA 90 bp AAGCCACAGCTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCTGCTGACTGCTCAGCCCATGGCCCGTaGGCTCCGCCCGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: KPQLQSWQSSLPGMAADCSAHGP*APPGRW
Trigger: CCACCTGCCGGGCGGAGCGCACGGGCCATGGGCTGA...GCAGTCAGCAGCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAGCTGTGGCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000585130.5
CDS-3UTR CCA 90 bp ATCTATGCACCAGATCCTCAGATCCCCGAGGTGGGTTGCGGGGAAGGCCCAGGGCTCAGATCCCCGAGGTaGGTTGCGGGGAAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: IYAPDPQIPEVGCGEGPGLRSPR*VAGKAQ
Trigger: CTGGGCCTTCCCCGCAACCCACCTCGGGGATCTGAG...CCCTGGGCCTTCCCCGCAACCCACCTCGGGGATCTGAGGATCTGGTGCATAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR GCA 90 bp CATCACACCCAGCCACGGAGAATCAGAGAGTCTCTTAAGAGACCTCCCAGCTCCTCAGCCCATGGCCCGTaGGCTCCGCCCGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: HHTQPRRIRESLKRPPSSSAHGP*APPGRW
Trigger: CCACCTGCCGGGCGGAGCGCACGGGCCATGGGCTGA...GGAGCTGGGAGGTCTCTTAAGAGACTCTCTGATTCTCCGTGGCTGGGTGTGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
CDS-3UTR GCA 90 bp AGGGAGCTGATGGATAAAGCCACAGCTTCAGTCCTGGCAGAGTTCACTGCCAGGCGGCGCAGTGCGCGTTaGCTGTGTCCGGCGCCCGCA +
Preference number: 4 (lower is better)
Translates to: RELMDKATASVLAEFTARRRSAR*LCPAPA
Trigger: TGCGGGCGCCGGACACAGGCAACGCGCACTGCGCCG...CCTGGCAGTGAACTCTGCCAGGACTGAAGCTGTGGCTTTATCCATCAGCTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000585130.5
CDS-3UTR GCA 90 bp TCTATGCACCAGATCCTCAGATCCCCGAGGTGGGTTGCGGGGAAGGCCCAGGGAGGAATGGCTGCTGACTaGGGGGCACTGATGGTGGGC +
Preference number: 4 (lower is better)
Translates to: SMHQILRSPRWVAGKAQGGMAAD*GALMVG
Trigger: GCCCACCATCAGTGCCCCGCAGTCAGCAGCCATTCC...TCCCTGGGCCTTCCCCGCAACCCACCTCGGGGATCTGAGGATCTGGTGCATAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR CCA 90 bp CTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCTGCTGACTGCGGGGCACTGCTCAGATCCCCGAGGTaGGTTGCGGGGAAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: LQSWQSSLPGMAADCGALLRSPR*VAGKAQ
Trigger: CTGGGCCTTCCCCGCAACCCACCTCGGGGATCTGAG...CAGTGCCCCGCAGTCAGCAGCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR TCA 90 bp CACAGCTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCTGCTGACTGCGGGGGCCAGGAATGGCTGCTaGCTGCGGGGCACTGATGGT +
Preference number: 4 (lower is better)
Translates to: HSFSPGRVHCQEWLLTAGARNGC*LRGTDG
Trigger: ACCATCAGTGCCCCGCAGTCAGCAGCCATTCCTGGC...CCCCGCAGTCAGCAGCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAGCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR GCA 90 bp ATCTCTCCTGTAGGTGATCTGCAGCCCATGGGGGTGCCCTATCTTCTCTGTCTGCCGCAGTCGGCGCAGTaGGCGTTGCCTGTGTCCGGC +
Preference number: 4 (lower is better)
Translates to: ISPVGDLQPMGVPYLLCLPQSAQ*ALPVSG
Trigger: GCCGGACACAGGCAACGCGCACTGCGCCGACTGCGG...CAGACAGAGAAGATAGGGCACCCCCATGGGCTGCAGATCACCTACAGGAGAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000580526.1
ENST00000585130.5
CDS-3UTR GCA 90 bp CAGTTAATGGGTCACCTGCTGCTGCGGCCACTCTCTGTTGATGCAGTAAGCCGGATCCCCGAGGTGGGTTaGGGGGAAGGCCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: QLMGHLLLRPLSVDAVSRIPEVG*GEGPGS
Trigger: GCTCCCTGGGCCTTCCCCGCAACCCACCTCGGGGAT...CCGGCTTACTGCATCAACAGAGAGTGGCCGCAGCAGCAGGTGACCCATTAACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585130.5
CDS-3UTR CCA 90 bp ATCTATGCACCAGATCCTCAGATCCCCGAGGTGGGTTGCGGGGAAGGCCCAGGGGTTCACTGCCAGGAATaGCTGCTGACTGCGGGGCAC +
Preference number: 4 (lower is better)
Translates to: IYAPDPQIPEVGCGEGPGVHCQE*LLTAGH
Trigger: GTGCCCCGCAGTCAGCAGCCATTCCTGGCAGTGAAC...CCCTGGGCCTTCCCCGCAACCCACCTCGGGGATCTGAGGATCTGGTGCATAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR TCA 90 bp TTGCGGGGAAGGCCCAGGGAGCTGATGGATAAAGCCACAGCTTCAGTCCTGGCAGCCAGGAATGGCTGCTaGCTGCGGGGCACTGATGGT +
Preference number: 4 (lower is better)
Translates to: LRGRPRELMDKATASVLAARNGC*LRGTDG
Trigger: ACCATCAGTGCCCCGCAGTCAGCAGCCATTCCTGGC...TGCCAGGACTGAAGCTGTGGCTTTATCCATCAGCTCCCTGGGCCTTCCCCGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR GCA 90 bp TTGCGGGGAAGGCCCAGGGAGCTGATGGATAAAGCCACAGCTTCAGTCCTGGCAGGAATGGCTGCTGACTaGGGGGCACTGATGGTGGGC +
Preference number: 4 (lower is better)
Translates to: LRGRPRELMDKATASVLAGMAAD*GALMVG
Trigger: GCCCACCATCAGTGCCCCGCAGTCAGCAGCCATTCC...TGCCAGGACTGAAGCTGTGGCTTTATCCATCAGCTCCCTGGGCCTTCCCCGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR CCA 90 bp CACAGCTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCTGCTGACTGCGGGGAGCAGCCTCCGCTCATaGCAATCCAGGGCGAACCAC +
Preference number: 4 (lower is better)
Translates to: HSFSPGRVHCQEWLLTAGSSLRS*QSRANH
Trigger: GTGGTTCGCCCTGGATTGCCATGAGCGGAGGCTGCT...CCCCGCAGTCAGCAGCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR TCA 90 bp CAGTTAATGGGTCACCTGCTGCTGCGGCCACTCTCTGTTGATGCAGTAAGCCGGGCCAGGAATGGCTGCTaGCTGCGGGGCACTGATGGT +
Preference number: 4 (lower is better)
Translates to: QLMGHLLLRPLSVDAVSRARNGC*LRGTDG
Trigger: ACCATCAGTGCCCCGCAGTCAGCAGCCATTCCTGGC...CCGGCTTACTGCATCAACAGAGAGTGGCCGCAGCAGCAGGTGACCCATTAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585130.5
CDS-3UTR GCA 90 bp CTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCTGCTGACTGCGGGGCACTGCAGCCAGGGCCGAGGTaGAAACTTCTTCCCACAAGG +
Preference number: 4 (lower is better)
Translates to: LQSWQSSLPGMAADCGALQPGPR*KLLPTR
Trigger: CCTTGTGGGAAGAAGTTTGCACCTCGGCCCTGGCTG...CAGTGCCCCGCAGTCAGCAGCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR CCA 90 bp TCTATGCACCAGATCCTCAGATCCCCGAGGTGGGTTGCGGGGAAGGCCCAGGGAAGACCAGGCAGTCGTTaGCCTGGGGGATGTAGTAGA +
Preference number: 4 (lower is better)
Translates to: SMHQILRSPRWVAGKAQGRPGSR*PGGCSR
Trigger: TCTACTACATCCCCCAGGCCAACGACTGCCTGGTCT...TCCCTGGGCCTTCCCCGCAACCCACCTCGGGGATCTGAGGATCTGGTGCATAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000580525.5
CDS-3UTR CCA 90 bp CACACCCAGCCACGGAGAATCAGAGAGTCTCTTAAGAGACCTCCCAGCTCCTTGCTCAGATCCCCGAGGTaGGTTGCGGGGAAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: HTQPRRIRESLKRPPSSLLRSPR*VAGKAQ
Trigger: CTGGGCCTTCCCCGCAACCCACCTCGGGGATCTGAG...CAAGGAGCTGGGAGGTCTCTTAAGAGACTCTCTGATTCTCCGTGGCTGGGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
CDS-3UTR GCA 90 bp CTATCTCCTTCCCACTTTCATGATACACAAACAGGTTCCTGGTGTGGCCATCTCTCAGCCCATGGCCCGTaGGCTCCGCCCGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LSPSHFHDTQTGSWCGHLSAHGP*APPGRW
Trigger: CCACCTGCCGGGCGGAGCGCACGGGCCATGGGCTGA...GAGATGGCCACACCAGGAACCTGTTTGTGTATCATGAAAGTGGGAAGGAGATAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580526.1
ENST00000585130.5
CDS-3UTR GCA 90 bp GGGTCTCCATTGAAGCAAAGAGAGAACATCCAGTGTATTTCTGCGTGGTGCTTGCGGCGCAGTGCGCGTTaGCTGTGTCCGGCGCCCGCA +
Preference number: 4 (lower is better)
Translates to: GSPLKQRENIQCISAWCLRRSAR*LCPAPA
Trigger: TGCGGGCGCCGGACACAGGCAACGCGCACTGCGCCG...CAAGCACCACGCAGAAATACACTGGATGTTCTCTCTTTGCTTCAATGGAGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
CDS-3UTR GCA 90 bp CTGGAATGCAATGGCGCAATCTCACTGCGCCCGGCCATTGACTACTTTATCTTTCCGCAGTCGGCGCAGTaGGCGTTGCCTGTGTCCGGC +
Preference number: 4 (lower is better)
Translates to: LECNGAISLRPAIDYFIFPQSAQ*ALPVSG
Trigger: GCCGGACACAGGCAACGCGCACTGCGCCGACTGCGG...AAAGATAAAGTAGTCAATGGCCGGGCGCAGTGAGATTGCGCCATTGCATTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
CDS-3UTR GCA 90 bp GGTGGGCAGCCAGGGCCGAGGTGCAAACTTCTTCCCACAAGGAGTTCCAGGTGTGCCATTTTTAGGTACTaGAGACGGGCTGCACGGAGG +
Preference number: 4 (lower is better)
Translates to: GGQPGPRCKLLPTRSSRCAIFRY*RRAARR
Trigger: CCTCCGTGCAGCCCGTCTGCAGTACCTAAAAATGGC...ACACCTGGAACTCCTTGTGGGAAGAAGTTTGCACCTCGGCCCTGGCTGCCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR GCA 90 bp CACAGCTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCTGCTGACTGCGGGGAGAAAAACCTGGCCCTaGTCGAAGGCATCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: HSFSPGRVHCQEWLLTAGRKTWP*SKASSG
Trigger: CCCACTGGATGCCTTCGAGCAGGGCCAGGTTTTTCT...CCCCGCAGTCAGCAGCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAGCTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR GCA 90 bp TCCTGGCAGAGTTCACTGCCAGGAATGGCTGCTGACTGCGGGGCACTGATGGTGAGAAAAACCTGGCCCTaGTCGAAGGCATCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: SWQSSLPGMAADCGALMVRKTWP*SKASSG
Trigger: CCCACTGGATGCCTTCGAGCAGGGCCAGGTTTTTCT...CACCATCAGTGCCCCGCAGTCAGCAGCCATTCCTGGCAGTGAACTCTGCCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR GCA 90 bp CTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCTGCTGACTGCGGGGCACTGAGCGATTTCCTCGGATaGCCTTGGGCAGGTCTTCGT +
Preference number: 4 (lower is better)
Translates to: LQSWQSSLPGMAADCGALSDFLG*PWAGLR
Trigger: ACGAAGACCTGCCCAAGGGCATCCGAGGAAATCGCT...CAGTGCCCCGCAGTCAGCAGCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR CCA 90 bp TGGTGGGCAGCCAGGGCCGAGGTGCAAACTTCTTCCCACAAGGAGTTCCAGGTGGTGATCTGCAGCCCATaGGGGTGCCCTATCTTCTCT +
Preference number: 4 (lower is better)
Translates to: WWAARAEVQTSSHKEFQVVICSP*GCPIFS
Trigger: AGAGAAGATAGGGCACCCCCATGGGCTGCAGATCAC...CACCTGGAACTCCTTGTGGGAAGAAGTTTGCACCTCGGCCCTGGCTGCCCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000585130.5
CDS-3UTR CCA 90 bp TCCTGGCAGAGTTCACTGCCAGGAATGGCTGCTGACTGCGGGGCACTGATGGTGGTGATCTGCAGCCCATaGGGGTGCCCTATCTTCTCT +
Preference number: 4 (lower is better)
Translates to: SWQSSLPGMAADCGALMVVICSP*GCPIFS
Trigger: AGAGAAGATAGGGCACCCCCATGGGCTGCAGATCAC...CACCATCAGTGCCCCGCAGTCAGCAGCCATTCCTGGCAGTGAACTCTGCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000585130.5
CDS-3UTR CCA 90 bp ATCTATGCACCAGATCCTCAGATCCCCGAGGTGGGTTGCGGGGAAGGCCCAGGGCACGAGCTCAGACTCTaGGAGTTCAGGAAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: IYAPDPQIPEVGCGEGPGHELRL*EFRKGH
Trigger: ATGGCCTTTCCTGAACTCCCAGAGTCTGAGCTCGTG...CCCTGGGCCTTCCCCGCAACCCACCTCGGGGATCTGAGGATCTGGTGCATAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR CCA 90 bp TCTATGCACCAGATCCTCAGATCCCCGAGGTGGGTTGCGGGGAAGGCCCAGGGACACGAGCTCAGACTCTaGGAGTTCAGGAAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: SMHQILRSPRWVAGKAQGHELRL*EFRKGH
Trigger: ATGGCCTTTCCTGAACTCCCAGAGTCTGAGCTCGTG...TCCCTGGGCCTTCCCCGCAACCCACCTCGGGGATCTGAGGATCTGGTGCATAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR CCA 90 bp CTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCTGCTGACTGCGGGGCACTGGTTCCTGGTGAGGAATaGCACGAGCTCAGACTCTGG +
Preference number: 4 (lower is better)
Translates to: LQSWQSSLPGMAADCGALVPGEE*HELRLW
Trigger: CCAGAGTCTGAGCTCGTGCCATTCCTCACCAGGAAC...CAGTGCCCCGCAGTCAGCAGCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR CCA 90 bp CAGTTAATGGGTCACCTGCTGCTGCGGCCACTCTCTGTTGATGCAGTAAGCCGGAGCAGCCTCCGCTCATaGCAATCCAGGGCGAACCAC +
Preference number: 4 (lower is better)
Translates to: QLMGHLLLRPLSVDAVSRSSLRS*QSRANH
Trigger: GTGGTTCGCCCTGGATTGCCATGAGCGGAGGCTGCT...CCGGCTTACTGCATCAACAGAGAGTGGCCGCAGCAGCAGGTGACCCATTAACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585130.5
CDS-3UTR CCA 90 bp GGTGGGCAGCCAGGGCCGAGGTGCAAACTTCTTCCCACAAGGAGTTCCAGGTGTCCACAGCTTCAGTCCTaGCAGAGTTCACTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: GGQPGPRCKLLPTRSSRCPQLQS*QSSLPG
Trigger: TCCTGGCAGTGAACTCTGCCAGGACTGAAGCTGTGG...ACACCTGGAACTCCTTGTGGGAAGAAGTTTGCACCTCGGCCCTGGCTGCCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR TCA 90 bp CTGATGGATAAAGCCACAGCTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCGCCAGGAATGGCTGCTaGCTGCGGGGCACTGATGGT +
Preference number: 4 (lower is better)
Translates to: LMDKATASVLAEFTARNGARNGC*LRGTDG
Trigger: ACCATCAGTGCCCCGCAGTCAGCAGCCATTCCTGGC...GCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAGCTGTGGCTTTATCCATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR TCA 90 bp TGTTCATCTATGCACCAGATCCTCAGATCCCCGAGGTGGGTTGCGGGGAAGGCCGAAGGCCCAGGGAGCTaGTGGATAAAGCCACAGCTT +
Preference number: 4 (lower is better)
Translates to: CSSMHQILRSPRWVAGKAEGPGS*WIKPQL
Trigger: AAGCTGTGGCTTTATCCATCAGCTCCCTGGGCCTTC...GGCCTTCCCCGCAACCCACCTCGGGGATCTGAGGATCTGGTGCATAGATGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR TCA 90 bp GGGATAGATGTTCATCTATGCACCAGATCCTCAGATCCCCGAGGTGGGTTGCGGGCGGCCACTCTCTGTTaGTGCAGTGGGGCAAGTGAG +
Preference number: 4 (lower is better)
Translates to: GIDVHLCTRSSDPRGGLRAATLC*CSGASE
Trigger: CTCACTTGCCCCACTGCATCAACAGAGAGTGGCCGC...CCGCAACCCACCTCGGGGATCTGAGGATCTGGTGCATAGATGAACATCTATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584828.5
CDS-3UTR GCA 90 bp TTGCGGGGAAGGCCCAGGGAGCTGATGGATAAAGCCACAGCTTCAGTCCTGGCAAGCGATTTCCTCGGATaGCCTTGGGCAGGTCTTCGT +
Preference number: 4 (lower is better)
Translates to: LRGRPRELMDKATASVLASDFLG*PWAGLR
Trigger: ACGAAGACCTGCCCAAGGGCATCCGAGGAAATCGCT...TGCCAGGACTGAAGCTGTGGCTTTATCCATCAGCTCCCTGGGCCTTCCCCGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR GCA 90 bp GCCATCTCTCCTGTAGGTGATCTGCAGCCCATGGGGGTGCCCTATCTTCTCTGTCAGCCAGGGCCGAGGTaGAAACTTCTTCCCACAAGG +
Preference number: 4 (lower is better)
Translates to: AISPVGDLQPMGVPYLLCQPGPR*KLLPTR
Trigger: CCTTGTGGGAAGAAGTTTGCACCTCGGCCCTGGCTG...ACAGAGAAGATAGGGCACCCCCATGGGCTGCAGATCACCTACAGGAGAGATGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585130.5
CDS-3UTR GCA 90 bp ACAAATCTCCGCTCTGGGGTGACAATGGTGAGTCCGGCTTTCCAGCGATTTCCTGGAATGGCTGCTGACTaGGGGGCACTGATGGTGGGC +
Preference number: 4 (lower is better)
Translates to: TNLRSGVTMVSPAFQRFPGMAAD*GALMVG
Trigger: GCCCACCATCAGTGCCCCGCAGTCAGCAGCCATTCC...AGGAAATCGCTGGAAAGCCGGACTCACCATTGTCACCCCAGAGCGGAGATTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585130.5
CDS-3UTR GCA 90 bp TGTTCATCTATGCACCAGATCCTCAGATCCCCGAGGTGGGTTGCGGGGAAGGCCTGGTCTCAATCCTCCTaGCTCAGCTTCCCAAAGGGC +
Preference number: 4 (lower is better)
Translates to: CSSMHQILRSPRWVAGKAWSQSS*LSFPKG
Trigger: GCCCTTTGGGAAGCTGAGGCAGGAGGATTGAGACCA...GGCCTTCCCCGCAACCCACCTCGGGGATCTGAGGATCTGGTGCATAGATGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
CDS-3UTR CCA 90 bp TGGTGGGCAGCCAGGGCCGAGGTGCAAACTTCTTCCCACAAGGAGTTCCAGGTGCTCTGGCTTCGAACTTaGCCTTCACACGGAGGTTTC +
Preference number: 4 (lower is better)
Translates to: WWAARAEVQTSSHKEFQVLWLRT*PSHGGF
Trigger: GAAACCTCCGTGTGAAGGCCAAGTTCGAAGCCAGAG...CACCTGGAACTCCTTGTGGGAAGAAGTTTGCACCTCGGCCCTGGCTGCCCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000585130.5
CDS-3UTR CCA 90 bp TTGCGGGGAAGGCCCAGGGAGCTGATGGATAAAGCCACAGCTTCAGTCCTGGCATCCTTCTCGGTTACCTaGGAGCGAGATGGTTTCCCC +
Preference number: 4 (lower is better)
Translates to: LRGRPRELMDKATASVLASFSVT*ERDGFP
Trigger: GGGGAAACCATCTCGCTCCCAGGTAACCGAGAAGGA...TGCCAGGACTGAAGCTGTGGCTTTATCCATCAGCTCCCTGGGCCTTCCCCGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000580525.5
CDS-3UTR CCA 90 bp TGTTCATCTATGCACCAGATCCTCAGATCCCCGAGGTGGGTTGCGGGGAAGGCCGTTCCTGGTGAGGAATaGCACGAGCTCAGACTCTGG +
Preference number: 4 (lower is better)
Translates to: CSSMHQILRSPRWVAGKAVPGEE*HELRLW
Trigger: CCAGAGTCTGAGCTCGTGCCATTCCTCACCAGGAAC...GGCCTTCCCCGCAACCCACCTCGGGGATCTGAGGATCTGGTGCATAGATGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR CCA 90 bp AGCTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCTGCTGACTGCGGGGCACGACAAATCTCCGCTCTaGGGTGACAATGGTGAGTCC +
Preference number: 4 (lower is better)
Translates to: SFSPGRVHCQEWLLTAGHDKSPL*GDNGES
Trigger: GGACTCACCATTGTCACCCCAGAGCGGAGATTTGTC...GTGCCCCGCAGTCAGCAGCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR CCA 90 bp GGTGGGCAGCCAGGGCCGAGGTGCAAACTTCTTCCCACAAGGAGTTCCAGGTGTGACAAATCTCCGCTCTaGGGTGACAATGGTGAGTCC +
Preference number: 4 (lower is better)
Translates to: GGQPGPRCKLLPTRSSRCDKSPL*GDNGES
Trigger: GGACTCACCATTGTCACCCCAGAGCGGAGATTTGTC...ACACCTGGAACTCCTTGTGGGAAGAAGTTTGCACCTCGGCCCTGGCTGCCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR CCA 90 bp GGGATAGATGTTCATCTATGCACCAGATCCTCAGATCCCCGAGGTGGGTTGCGGGTTCACTGCCAGGAATaGCTGCTGACTGCGGGGCAC +
Preference number: 4 (lower is better)
Translates to: GIDVHLCTRSSDPRGGLRVHCQE*LLTAGH
Trigger: GTGCCCCGCAGTCAGCAGCCATTCCTGGCAGTGAAC...CCGCAACCCACCTCGGGGATCTGAGGATCTGGTGCATAGATGAACATCTATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR TCA 90 bp TGGTGGGCAGCCAGGGCCGAGGTGCAAACTTCTTCCCACAAGGAGTTCCAGGTGCCTTCTCAGAAACTGTaGGTTGTCCCTTCCTCGCTT +
Preference number: 4 (lower is better)
Translates to: WWAARAEVQTSSHKEFQVPSQKL*VVPSSL
Trigger: AAGCGAGGAAGGGACAACTCACAGTTTCTGAGAAGG...CACCTGGAACTCCTTGTGGGAAGAAGTTTGCACCTCGGCCCTGGCTGCCCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000585130.5
CDS-3UTR TCA 90 bp ATCTCTCCTGTAGGTGATCTGCAGCCCATGGGGGTGCCCTATCTTCTCTGTCTGGCGGCCACTCTCTGTTaGTGCAGTAAGCCGGTTGAG +
Preference number: 4 (lower is better)
Translates to: ISPVGDLQPMGVPYLLCLAATLC*CSKPVE
Trigger: CTCAACCGGCTTACTGCATCAACAGAGAGTGGCCGC...CAGACAGAGAAGATAGGGCACCCCCATGGGCTGCAGATCACCTACAGGAGAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585130.5
CDS-3UTR TCA 90 bp AAGCCACAGCTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCTGCTGACTGCGAAGGCCCAGGGAGCTaGTGGATAAAGCCACAGCTT +
Preference number: 4 (lower is better)
Translates to: KPQLQSWQSSLPGMAADCEGPGS*WIKPQL
Trigger: AAGCTGTGGCTTTATCCATCAGCTCCCTGGGCCTTC...GCAGTCAGCAGCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAGCTGTGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR TCA 90 bp AGCTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCTGCTGACTGCGGGGCACAAGATGCCACTTGCATaGTGCTGTGGGTGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: SFSPGRVHCQEWLLTAGHKMPLA*CCGCLF
Trigger: GAAAAGGCACCCACAGCATCATGCAAGTGGCATCTT...GTGCCCCGCAGTCAGCAGCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR TCA 90 bp TCTATGCACCAGATCCTCAGATCCCCGAGGTGGGTTGCGGGGAAGGCCCAGGGATTTAACACACTGGCCTaGGATCAAATCGTGGCCTGT +
Preference number: 4 (lower is better)
Translates to: SMHQILRSPRWVAGKAQGFNTLA*DQIVAC
Trigger: ACAGGCCACGATTTGATCTCAGGCCAGTGTGTTAAA...TCCCTGGGCCTTCCCCGCAACCCACCTCGGGGATCTGAGGATCTGGTGCATAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585130.5
CDS-3UTR GCA 90 bp TTGCGGGGAAGGCCCAGGGAGCTGATGGATAAAGCCACAGCTTCAGTCCTGGCACTTTCCAGCCATTCCTaGTGTTCCTTCTCACTGGGG +
Preference number: 4 (lower is better)
Translates to: LRGRPRELMDKATASVLALSSHS*CSFSLG
Trigger: CCCCAGTGAGAAGGAACAGCAGGAATGGCTGGAAAG...TGCCAGGACTGAAGCTGTGGCTTTATCCATCAGCTCCCTGGGCCTTCCCCGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000585130.5
CDS-3UTR CCA 90 bp GCCATCTCTCCTGTAGGTGATCTGCAGCCCATGGGGGTGCCCTATCTTCTCTGTTCCTTCTCGGTTACCTaGGAGCGAGATGGTTTCCCC +
Preference number: 4 (lower is better)
Translates to: AISPVGDLQPMGVPYLLCSFSVT*ERDGFP
Trigger: GGGGAAACCATCTCGCTCCCAGGTAACCGAGAAGGA...ACAGAGAAGATAGGGCACCCCCATGGGCTGCAGATCACCTACAGGAGAGATGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580526.1
CDS-3UTR CCA 90 bp CACAGCTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCTGCTGACTGCGGGGACACAAACAGGTTCCTaGTGTGGCCATCTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: HSFSPGRVHCQEWLLTAGTQTGS*CGHLSC
Trigger: ACAGGAGAGATGGCCACACCAGGAACCTGTTTGTGT...CCCCGCAGTCAGCAGCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000585130.5
CDS-3UTR CCA 90 bp ATCTATGCACCAGATCCTCAGATCCCCGAGGTGGGTTGCGGGGAAGGCCCAGGGCTCGAAGGCATCCAGTaGGTTCTTGTAATAGAGCAG +
Preference number: 4 (lower is better)
Translates to: IYAPDPQIPEVGCGEGPGLEGIQ*VLVIEQ
Trigger: CTGCTCTATTACAAGAACCCACTGGATGCCTTCGAG...CCCTGGGCCTTCCCCGCAACCCACCTCGGGGATCTGAGGATCTGGTGCATAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR CCA 90 bp CTGATGGATAAAGCCACAGCTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCGTTCACTGCCAGGAATaGCTGCTGACTGCGGGGCAC +
Preference number: 4 (lower is better)
Translates to: LMDKATASVLAEFTARNGVHCQE*LLTAGH
Trigger: GTGCCCCGCAGTCAGCAGCCATTCCTGGCAGTGAAC...GCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAGCTGTGGCTTTATCCATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR TCA 90 bp CTGATGGATAAAGCCACAGCTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCGCGGCCACTCTCTGTTaGTGCAGTAAGCCGGTTGAG +
Preference number: 4 (lower is better)
Translates to: LMDKATASVLAEFTARNGAATLC*CSKPVE
Trigger: CTCAACCGGCTTACTGCATCAACAGAGAGTGGCCGC...GCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAGCTGTGGCTTTATCCATCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000585130.5
CDS-3UTR TCA 90 bp AGATGTTCATCTATGCACCAGATCCTCAGATCCCCGAGGTGGGTTGCGGGGAAGGAAGGCCCAGGGAGCTaGTGGATAAAGCCACAGCTT +
Preference number: 4 (lower is better)
Translates to: RCSSMHQILRSPRWVAGKEGPGS*WIKPQL
Trigger: AAGCTGTGGCTTTATCCATCAGCTCCCTGGGCCTTC...CTTCCCCGCAACCCACCTCGGGGATCTGAGGATCTGGTGCATAGATGAACATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR TCA 90 bp AGCTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCTGCTGACTGCGGGGCACCCTCCATTTCAGATGTaGGAAAGTTCTGGGCCTGTA +
Preference number: 4 (lower is better)
Translates to: SFSPGRVHCQEWLLTAGHPPFQM*ESSGPV
Trigger: TACAGGCCCAGAACTTTCTCACATCTGAAATGGAGG...GTGCCCCGCAGTCAGCAGCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR TCA 90 bp TGGTGGGCAGCCAGGGCCGAGGTGCAAACTTCTTCCCACAAGGAGTTCCAGGTGCCTCCATTTCAGATGTaGGAAAGTTCTGGGCCTGTA +
Preference number: 4 (lower is better)
Translates to: WWAARAEVQTSSHKEFQVPPFQM*ESSGPV
Trigger: TACAGGCCCAGAACTTTCTCACATCTGAAATGGAGG...CACCTGGAACTCCTTGTGGGAAGAAGTTTGCACCTCGGCCCTGGCTGCCCACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR TCA 90 bp CTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCTGCTGACTGCGGGGCACTGTCCTTGGGTCTCCATTaGAGCAAAGAGAGAACATCC +
Preference number: 4 (lower is better)
Translates to: LQSWQSSLPGMAADCGALSLGLH*SKERTS
Trigger: GGATGTTCTCTCTTTGCTTCAATGGAGACCCAAGGA...CAGTGCCCCGCAGTCAGCAGCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
CDS-3UTR TCA 90 bp AGGGAGCTGATGGATAAAGCCACAGCTTCAGTCCTGGCAGAGTTCACTGCCAGGATGCAGTGGGGCAAGTaGGGACAAATCTCCGCTCTG +
Preference number: 4 (lower is better)
Translates to: RELMDKATASVLAEFTARMQWGK*GQISAL
Trigger: CAGAGCGGAGATTTGTCCTCACTTGCCCCACTGCAT...CCTGGCAGTGAACTCTGCCAGGACTGAAGCTGTGGCTTTATCCATCAGCTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584828.5
CDS-3UTR GCA 90 bp GGGATAGATGTTCATCTATGCACCAGATCCTCAGATCCCCGAGGTGGGTTGCGGAGAAAAACCTGGCCCTaGTCGAAGGCATCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: GIDVHLCTRSSDPRGGLRRKTWP*SKASSG
Trigger: CCCACTGGATGCCTTCGAGCAGGGCCAGGTTTTTCT...CCGCAACCCACCTCGGGGATCTGAGGATCTGGTGCATAGATGAACATCTATCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR GCA 90 bp AAATCTCCGCTCTGGGGTGACAATGGTGAGTCCGGCTTTCCAGCGATTTCCTCGAGCGATTTCCTCGGATaGCCTTGGGCAGGTCTTCGT +
Preference number: 4 (lower is better)
Translates to: KSPLWGDNGESGFPAISSSDFLG*PWAGLR
Trigger: ACGAAGACCTGCCCAAGGGCATCCGAGGAAATCGCT...CGAGGAAATCGCTGGAAAGCCGGACTCACCATTGTCACCCCAGAGCGGAGATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585130.5
CDS-3UTR GCA 90 bp ATGGATAAAGCCACAGCTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCTGCCAGCCAGGGCCGAGGTaGAAACTTCTTCCCACAAGG +
Preference number: 4 (lower is better)
Translates to: MDKATASVLAEFTARNGCQPGPR*KLLPTR
Trigger: CCTTGTGGGAAGAAGTTTGCACCTCGGCCCTGGCTG...GCAGCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAGCTGTGGCTTTATCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR GCA 90 bp GGGATAGATGTTCATCTATGCACCAGATCCTCAGATCCCCGAGGTGGGTTGCGGCCTGGCAGAGTTCACTaGCAGGAATGGCTGCTGACT +
Preference number: 4 (lower is better)
Translates to: GIDVHLCTRSSDPRGGLRPGRVH*QEWLLT
Trigger: AGTCAGCAGCCATTCCTGGCAGTGAACTCTGCCAGG...CCGCAACCCACCTCGGGGATCTGAGGATCTGGTGCATAGATGAACATCTATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR GCA 90 bp ACAGGCTTACGCATTGCTTATCCTTTGATTGGGGGATCCAAAGGAAAGTCCCATATCCCCGAGGTGGGTTaGGGGGAAGGCCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: TGLRIAYPLIGGSKGKSHIPEVG*GEGPGS
Trigger: GCTCCCTGGGCCTTCCCCGCAACCCACCTCGGGGAT...ATGGGACTTTCCTTTGGATCCCCCAATCAAAGGATAAGCAATGCGTAAGCCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000330889.8
CDS-3UTR CCA 90 bp TGTTCATCTATGCACCAGATCCTCAGATCCCCGAGGTGGGTTGCGGGGAAGGCCACACAAACAGGTTCCTaGTGTGGCCATCTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: CSSMHQILRSPRWVAGKATQTGS*CGHLSC
Trigger: ACAGGAGAGATGGCCACACCAGGAACCTGTTTGTGT...GGCCTTCCCCGCAACCCACCTCGGGGATCTGAGGATCTGGTGCATAGATGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000585130.5
CDS-3UTR CCA 90 bp AGGGAGCTGATGGATAAAGCCACAGCTTCAGTCCTGGCAGAGTTCACTGCCAGGGTTCCTGGTGAGGAATaGCACGAGCTCAGACTCTGG +
Preference number: 4 (lower is better)
Translates to: RELMDKATASVLAEFTARVPGEE*HELRLW
Trigger: CCAGAGTCTGAGCTCGTGCCATTCCTCACCAGGAAC...CCTGGCAGTGAACTCTGCCAGGACTGAAGCTGTGGCTTTATCCATCAGCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR CCA 90 bp TGTATGGGGGAGGAGGGGATAGATGTTCATCTATGCACCAGATCCTCAGATCCCAGCAGCCTCCGCTCATaGCAATCCAGGGCGAACCAC +
Preference number: 4 (lower is better)
Translates to: CMGEEGIDVHLCTRSSDPSSLRS*QSRANH
Trigger: GTGGTTCGCCCTGGATTGCCATGAGCGGAGGCTGCT...GGGATCTGAGGATCTGGTGCATAGATGAACATCTATCCCCTCCTCCCCCATACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR CCA 90 bp AGCTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCTGCTGACTGCGGGGCACCTCGAAGGCATCCAGTaGGTTCTTGTAATAGAGCAG +
Preference number: 4 (lower is better)
Translates to: SFSPGRVHCQEWLLTAGHLEGIQ*VLVIEQ
Trigger: CTGCTCTATTACAAGAACCCACTGGATGCCTTCGAG...GTGCCCCGCAGTCAGCAGCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR CCA 90 bp TGTTCATCTATGCACCAGATCCTCAGATCCCCGAGGTGGGTTGCGGGGAAGGCCGTTCCAGGTGTTCAGTaGCAGCCAGTTCCTCAGTTA +
Preference number: 4 (lower is better)
Translates to: CSSMHQILRSPRWVAGKAVPGVQ*QPVPQL
Trigger: TAACTGAGGAACTGGCTGCCACTGAACACCTGGAAC...GGCCTTCCCCGCAACCCACCTCGGGGATCTGAGGATCTGGTGCATAGATGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR CCA 90 bp GGGGCTTTTACCCTGTTCCTTTGTGAAGTACTTCAGGAGGCCTTCTCTTGCCAGGTTCACTGCCAGGAATaGCTGCTGACTGCGGGGCAC +
Preference number: 4 (lower is better)
Translates to: GAFTLFLCEVLQEAFSCQVHCQE*LLTAGH
Trigger: GTGCCCCGCAGTCAGCAGCCATTCCTGGCAGTGAAC...CTGGCAAGAGAAGGCCTCCTGAAGTACTTCACAAAGGAACAGGGTAAAAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000585130.5
CDS-3UTR CCA 90 bp TCCTGGCAGAGTTCACTGCCAGGAATGGCTGCTGACTGCGGGGCACTGATGGTGAGTGTCCGGAGTAGCTaGGACTACAGGCATTCATTA +
Preference number: 4 (lower is better)
Translates to: SWQSSLPGMAADCGALMVSVRSS*DYRHSL
Trigger: TAATGAATGCCTGTAGTCCCAGCTACTCCGGACACT...CACCATCAGTGCCCCGCAGTCAGCAGCCATTCCTGGCAGTGAACTCTGCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330889.8
CDS-3UTR TCA 90 bp AAGCCACAGCTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCTGCTGACTGCCCTTCTCAGAAACTGTaGGTTGTCCCTTCCTCGCTT +
Preference number: 4 (lower is better)
Translates to: KPQLQSWQSSLPGMAADCPSQKL*VVPSSL
Trigger: AAGCGAGGAAGGGACAACTCACAGTTTCTGAGAAGG...GCAGTCAGCAGCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAGCTGTGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000585130.5
CDS-3UTR TCA 90 bp TGTTCATCTATGCACCAGATCCTCAGATCCCCGAGGTGGGTTGCGGGGAAGGCCCCTCCATTTCAGATGTaGGAAAGTTCTGGGCCTGTA +
Preference number: 4 (lower is better)
Translates to: CSSMHQILRSPRWVAGKAPPFQM*ESSGPV
Trigger: TACAGGCCCAGAACTTTCTCACATCTGAAATGGAGG...GGCCTTCCCCGCAACCCACCTCGGGGATCTGAGGATCTGGTGCATAGATGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR TCA 90 bp AAGCCACAGCTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCTGCTGACTGCAAGATGCCACTTGCATaGTGCTGTGGGTGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: KPQLQSWQSSLPGMAADCKMPLA*CCGCLF
Trigger: GAAAAGGCACCCACAGCATCATGCAAGTGGCATCTT...GCAGTCAGCAGCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAGCTGTGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR TCA 90 bp CTGATGGATAAAGCCACAGCTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCCCTCCCTGGCTCAAGTaGTCCTCTCACATCAGTGTC +
Preference number: 4 (lower is better)
Translates to: LMDKATASVLAEFTARNGPPWLK*SSHISV
Trigger: GACACTGATGTGAGAGGATCACTTGAGCCAGGGAGG...GCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAGCTGTGGCTTTATCCATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330889.8
CDS-3UTR GCA 90 bp TGTTCATCTATGCACCAGATCCTCAGATCCCCGAGGTGGGTTGCGGGGAAGGCCCAGGAGGCCTTCTCTTaGCAGAAGTACAAACTTCCT +
Preference number: 4 (lower is better)
Translates to: CSSMHQILRSPRWVAGKAQEAFS*QKYKLP
Trigger: AGGAAGTTTGTACTTCTGGCAAGAGAAGGCCTCCTG...GGCCTTCCCCGCAACCCACCTCGGGGATCTGAGGATCTGGTGCATAGATGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000585130.5
CDS-3UTR GCA 90 bp ATGGATAAAGCCACAGCTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCTGCAGCGATTTCCTCGGATaGCCTTGGGCAGGTCTTCGT +
Preference number: 4 (lower is better)
Translates to: MDKATASVLAEFTARNGCSDFLG*PWAGLR
Trigger: ACGAAGACCTGCCCAAGGGCATCCGAGGAAATCGCT...GCAGCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAGCTGTGGCTTTATCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR GCA 90 bp AAATCTCCGCTCTGGGGTGACAATGGTGAGTCCGGCTTTCCAGCGATTTCCTCGCTTTCCAGCCATTCCTaGTGTTCCTTCTCACTGGGG +
Preference number: 4 (lower is better)
Translates to: KSPLWGDNGESGFPAISSLSSHS*CSFSLG
Trigger: CCCCAGTGAGAAGGAACAGCAGGAATGGCTGGAAAG...CGAGGAAATCGCTGGAAAGCCGGACTCACCATTGTCACCCCAGAGCGGAGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585130.5
CDS-3UTR GCA 90 bp ATGGATAAAGCCACAGCTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCTGCCCTGGCAGAGTTCACTaGCAGGAATGGCTGCTGACT +
Preference number: 4 (lower is better)
Translates to: MDKATASVLAEFTARNGCPGRVH*QEWLLT
Trigger: AGTCAGCAGCCATTCCTGGCAGTGAACTCTGCCAGG...GCAGCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAGCTGTGGCTTTATCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR GCA 90 bp ATCTATGCACCAGATCCTCAGATCCCCGAGGTGGGTTGCGGGGAAGGCCCAGGGGCCTTTTCATTGCAATaGCTCCATTTCAGATGTGAG +
Preference number: 4 (lower is better)
Translates to: IYAPDPQIPEVGCGEGPGAFSLQ*LHFRCE
Trigger: CTCACATCTGAAATGGAGGCATTGCAATGAAAAGGC...CCCTGGGCCTTCCCCGCAACCCACCTCGGGGATCTGAGGATCTGGTGCATAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR GCA 90 bp CTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCTGCTGACTGCGGGGCACTGCATCCAGTGTATTTCTaGGTGGTGCTTGAAGACAGA +
Preference number: 4 (lower is better)
Translates to: LQSWQSSLPGMAADCGALHPVYF*VVLEDR
Trigger: TCTGTCTTCAAGCACCACGCAGAAATACACTGGATG...CAGTGCCCCGCAGTCAGCAGCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
CDS-3UTR GCA 90 bp CATCACACCCAGCCACGGAGAATCAGAGAGTCTCTTAAGAGACCTCCCAGCTCCGGGGTCTCACTATGTTaGCCAGGCTCTTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: HHTQPRRIRESLKRPPSSGVSLC*PGSSRT
Trigger: AGTTCGAGAAGAGCCTGGGCAACATAGTGAGACCCC...GGAGCTGGGAGGTCTCTTAAGAGACTCTCTGATTCTCCGTGGCTGGGTGTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
CDS-3UTR GCA 90 bp AAATCTCCGCTCTGGGGTGACAATGGTGAGTCCGGCTTTCCAGCGATTTCCTCGGGGGTCTCACTATGTTaGCCAGGCTCTTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: KSPLWGDNGESGFPAISSGVSLC*PGSSRT
Trigger: AGTTCGAGAAGAGCCTGGGCAACATAGTGAGACCCC...CGAGGAAATCGCTGGAAAGCCGGACTCACCATTGTCACCCCAGAGCGGAGATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585130.5
CDS-3UTR CCA 90 bp CTGATGGATAAAGCCACAGCTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCTCAGGGAAGTTACGGTaGACGCCGCAGCAGTTGAGA +
Preference number: 4 (lower is better)
Translates to: LMDKATASVLAEFTARNGSGKLR*TPQQLR
Trigger: TCTCAACTGCTGCGGCGTCCACCGTAACTTCCCTGA...GCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAGCTGTGGCTTTATCCATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000585130.5
CDS-3UTR CCA 90 bp GGTGGGCAGCCAGGGCCGAGGTGCAAACTTCTTCCCACAAGGAGTTCCAGGTGTGATGTAGTAGAAAGCTaGGACTCTGGCTTCGAACTT +
Preference number: 4 (lower is better)
Translates to: GGQPGPRCKLLPTRSSRCDVVES*DSGFEL
Trigger: AAGTTCGAAGCCAGAGTCCCAGCTTTCTACTACATC...ACACCTGGAACTCCTTGTGGGAAGAAGTTTGCACCTCGGCCCTGGCTGCCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000585130.5
CDS-3UTR CCA 90 bp CTGATGGATAAAGCCACAGCTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCTCCTTCTCGGTTACCTaGGAGCGAGATGGTTTCCCC +
Preference number: 4 (lower is better)
Translates to: LMDKATASVLAEFTARNGSFSVT*ERDGFP
Trigger: GGGGAAACCATCTCGCTCCCAGGTAACCGAGAAGGA...GCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAGCTGTGGCTTTATCCATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000580525.5
CDS-3UTR CCA 90 bp CTGATGGATAAAGCCACAGCTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCGTGATCTGCAGCCCATaGGGGTGCCCTATCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LMDKATASVLAEFTARNGVICSP*GCPIFS
Trigger: AGAGAAGATAGGGCACCCCCATGGGCTGCAGATCAC...GCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAGCTGTGGCTTTATCCATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000585130.5
CDS-3UTR CCA 90 bp AGCCACGGAGAATCAGAGAGTCTCTTAAGAGACCTCCCAGCTCCTTGGGTCTCCTTCCCAAGAAAAACCTaGCCCTGCTCGAAGGCATCC +
Preference number: 4 (lower is better)
Translates to: SHGESESLLRDLPAPWVSFPRKT*PCSKAS
Trigger: GGATGCCTTCGAGCAGGGCCAGGTTTTTCTTGGGAA...GGAGACCCAAGGAGCTGGGAGGTCTCTTAAGAGACTCTCTGATTCTCCGTGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
CDS-3UTR CCA 90 bp CATCACACCCAGCCACGGAGAATCAGAGAGTCTCTTAAGAGACCTCCCAGCTCCGACAAATCTCCGCTCTaGGGTGACAATGGTGAGTCC +
Preference number: 4 (lower is better)
Translates to: HHTQPRRIRESLKRPPSSDKSPL*GDNGES
Trigger: GGACTCACCATTGTCACCCCAGAGCGGAGATTTGTC...GGAGCTGGGAGGTCTCTTAAGAGACTCTCTGATTCTCCGTGGCTGGGTGTGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
CDS-3UTR CCA 90 bp AAGCCACAGCTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCTGCTGACTGCGTTCCAGGTGTTCAGTaGCAGCCAGTTCCTCAGTTA +
Preference number: 4 (lower is better)
Translates to: KPQLQSWQSSLPGMAADCVPGVQ*QPVPQL
Trigger: TAACTGAGGAACTGGCTGCCACTGAACACCTGGAAC...GCAGTCAGCAGCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAGCTGTGGCTT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR CCA 90 bp ATGGATAAAGCCACAGCTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCTGCCCACAGCTTCAGTCCTaGCAGAGTTCACTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: MDKATASVLAEFTARNGCPQLQS*QSSLPG
Trigger: TCCTGGCAGTGAACTCTGCCAGGACTGAAGCTGTGG...GCAGCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAGCTGTGGCTTTATCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR TCA 90 bp TGTATGGGGGAGGAGGGGATAGATGTTCATCTATGCACCAGATCCTCAGATCCCTCTCACTGGGGCAAGTaGGGACAAATCTCCGCTCTG +
Preference number: 4 (lower is better)
Translates to: CMGEEGIDVHLCTRSSDPSHWGK*GQISAL
Trigger: CAGAGCGGAGATTTGTCCTCACTTGCCCCAGTGAGA...GGGATCTGAGGATCTGGTGCATAGATGAACATCTATCCCCTCCTCCCCCATACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000585130.5
CDS-3UTR TCA 90 bp CACACCCAGCCACGGAGAATCAGAGAGTCTCTTAAGAGACCTCCCAGCTCCTTGAAGATGCCACTTGCATaGTGCTGTGGGTGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: HTQPRRIRESLKRPPSSLKMPLA*CCGCLF
Trigger: GAAAAGGCACCCACAGCATCATGCAAGTGGCATCTT...CAAGGAGCTGGGAGGTCTCTTAAGAGACTCTCTGATTCTCCGTGGCTGGGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
CDS-3UTR TCA 90 bp ATCTATGCACCAGATCCTCAGATCCCCGAGGTGGGTTGCGGGGAAGGCCCAGGGTTCACTCTTCATTTTTaGAGAGTCTGGGTCAGATGT +
Preference number: 4 (lower is better)
Translates to: IYAPDPQIPEVGCGEGPGFTLHF*RVWVRC
Trigger: ACATCTGACCCAGACTCTTCAAAAATGAAGAGTGAA...CCCTGGGCCTTCCCCGCAACCCACCTCGGGGATCTGAGGATCTGGTGCATAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000584828.5
ENST00000585130.5
CDS-3UTR GCA 90 bp GTGTATGGGGGAGGAGGGGATAGATGTTCATCTATGCACCAGATCCTCAGATCCGCCATTTTTAGGTACTaGAGACGGGCTGCACGGAGG +
Preference number: 4 (lower is better)
Translates to: VYGGGGDRCSSMHQILRSAIFRY*RRAARR
Trigger: CCTCCGTGCAGCCCGTCTGCAGTACCTAAAAATGGC...GGATCTGAGGATCTGGTGCATAGATGAACATCTATCCCCTCCTCCCCCATACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR GCA 90 bp CTGATGGATAAAGCCACAGCTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCCTTTCCAGCCATTCCTaGTGTTCCTTCTCACTGGGG +
Preference number: 4 (lower is better)
Translates to: LMDKATASVLAEFTARNGLSSHS*CSFSLG
Trigger: CCCCAGTGAGAAGGAACAGCAGGAATGGCTGGAAAG...GCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAGCTGTGGCTTTATCCATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000585130.5
CDS-3UTR GCA 90 bp CTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCTGCTGACTGCGGGGCACTGATAGATGTTCATCTATaGACCAGATCCTCAGATCCC +
Preference number: 4 (lower is better)
Translates to: LQSWQSSLPGMAADCGALIDVHL*TRSSDP
Trigger: GGGATCTGAGGATCTGGTGCATAGATGAACATCTAT...CAGTGCCCCGCAGTCAGCAGCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR GCA 90 bp AGCTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCTGCTGACTGCGGGGCACGCCTTTTCATTGCAATaGCTCCATTTCAGATGTGAG +
Preference number: 4 (lower is better)
Translates to: SFSPGRVHCQEWLLTAGHAFSLQ*LHFRCE
Trigger: CTCACATCTGAAATGGAGGCATTGCAATGAAAAGGC...GTGCCCCGCAGTCAGCAGCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR GCA 90 bp GGTGGGCAGCCAGGGCCGAGGTGCAAACTTCTTCCCACAAGGAGTTCCAGGTGTGCCTTTTCATTGCAATaGCTCCATTTCAGATGTGAG +
Preference number: 4 (lower is better)
Translates to: GGQPGPRCKLLPTRSSRCAFSLQ*LHFRCE
Trigger: CTCACATCTGAAATGGAGGCATTGCAATGAAAAGGC...ACACCTGGAACTCCTTGTGGGAAGAAGTTTGCACCTCGGCCCTGGCTGCCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR CCA 90 bp GTGTATGGGGGAGGAGGGGATAGATGTTCATCTATGCACCAGATCCTCAGATCCTCAGGGAAGTTACGGTaGACGCCGCAGCAGTTGAGA +
Preference number: 4 (lower is better)
Translates to: VYGGGGDRCSSMHQILRSSGKLR*TPQQLR
Trigger: TCTCAACTGCTGCGGCGTCCACCGTAACTTCCCTGA...GGATCTGAGGATCTGGTGCATAGATGAACATCTATCCCCTCCTCCCCCATACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000585130.5
CDS-3UTR CCA 90 bp CACAGCTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCTGCTGACTGCGGGGAGGTTCTTTCTGCTTTaGCCCAGTCTTTTCCATGAA +
Preference number: 4 (lower is better)
Translates to: HSFSPGRVHCQEWLLTAGRFFLL*PSLFHE
Trigger: TTCATGGAAAAGACTGGGCCAAAGCAGAAAGAACCT...CCCCGCAGTCAGCAGCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR CCA 90 bp CTGATGGATAAAGCCACAGCTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCTTCCCAAGAAAAACCTaGCCCTGCTCGAAGGCATCC +
Preference number: 4 (lower is better)
Translates to: LMDKATASVLAEFTARNGFPRKT*PCSKAS
Trigger: GGATGCCTTCGAGCAGGGCCAGGTTTTTCTTGGGAA...GCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAGCTGTGGCTTTATCCATCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR CCA 90 bp ATGGATAAAGCCACAGCTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCTGCTTCCCAAGAAAAACCTaGCCCTGCTCGAAGGCATCC +
Preference number: 4 (lower is better)
Translates to: MDKATASVLAEFTARNGCFPRKT*PCSKAS
Trigger: GGATGCCTTCGAGCAGGGCCAGGTTTTTCTTGGGAA...GCAGCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAGCTGTGGCTTTATCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR CCA 90 bp GGTGGGCAGCCAGGGCCGAGGTGCAAACTTCTTCCCACAAGGAGTTCCAGGTGTCGGAGGTTTCCATTGTaGATCATAAACTGCAAGACA +
Preference number: 4 (lower is better)
Translates to: GGQPGPRCKLLPTRSSRCRRFPL*IINCKT
Trigger: TGTCTTGCAGTTTATGATCCACAATGGAAACCTCCG...ACACCTGGAACTCCTTGTGGGAAGAAGTTTGCACCTCGGCCCTGGCTGCCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580525.5
CDS-3UTR TCA 90 bp GGGTCTCCATTGAAGCAAAGAGAGAACATCCAGTGTATTTCTGCGTGGTGCTTGGCGGCCACTCTCTGTTaGTGCAGTAAGCCGGTTGAG +
Preference number: 4 (lower is better)
Translates to: GSPLKQRENIQCISAWCLAATLC*CSKPVE
Trigger: CTCAACCGGCTTACTGCATCAACAGAGAGTGGCCGC...CAAGCACCACGCAGAAATACACTGGATGTTCTCTCTTTGCTTCAATGGAGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
CDS-3UTR TCA 90 bp GGGATAGATGTTCATCTATGCACCAGATCCTCAGATCCCCGAGGTGGGTTGCGGCCTCCATTTCAGATGTaGGAAAGTTCTGGGCCTGTA +
Preference number: 4 (lower is better)
Translates to: GIDVHLCTRSSDPRGGLRPPFQM*ESSGPV
Trigger: TACAGGCCCAGAACTTTCTCACATCTGAAATGGAGG...CCGCAACCCACCTCGGGGATCTGAGGATCTGGTGCATAGATGAACATCTATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR TCA 90 bp CTGATGGATAAAGCCACAGCTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCAAGATGCCACTTGCATaGTGCTGTGGGTGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: LMDKATASVLAEFTARNGKMPLA*CCGCLF
Trigger: GAAAAGGCACCCACAGCATCATGCAAGTGGCATCTT...GCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAGCTGTGGCTTTATCCATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR TCA 90 bp AGATGTTCATCTATGCACCAGATCCTCAGATCCCCGAGGTGGGTTGCGGGGAAGTTTCTGCGTGGTGCTTaGAGACAGAGGAAAGGAACA +
Preference number: 4 (lower is better)
Translates to: RCSSMHQILRSPRWVAGKFLRGA*RQRKGT
Trigger: TGTTCCTTTCCTCTGTCTTCAAGCACCACGCAGAAA...CTTCCCCGCAACCCACCTCGGGGATCTGAGGATCTGGTGCATAGATGAACATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
CDS-3UTR GCA 90 bp AAGACAGAGGAAAGGAACAACGAGTCACAGAGCAGGGGACTTGGTGCTCTGTTTGCCATTTTTAGGTACTaGAGACGGGCTGCACGGAGG +
Preference number: 4 (lower is better)
Translates to: KTEERNNESQSRGLGALFAIFRY*RRAARR
Trigger: CCTCCGTGCAGCCCGTCTGCAGTACCTAAAAATGGC...AAACAGAGCACCAAGTCCCCTGCTCTGTGACTCGTTGTTCCTTTCCTCTGTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
CDS-3UTR GCA 90 bp TTAGGACTTTATCTCTTGTGTCTGTTCTTTCCCACCCTTAGAATCCCAGTTGGCGGAATGGCTGCTGACTaGGGGGCACTGATGGTGGGC +
Preference number: 4 (lower is better)
Translates to: LGLYLLCLFFPTLRIPVGGMAAD*GALMVG
Trigger: GCCCACCATCAGTGCCCCGCAGTCAGCAGCCATTCC...GCCAACTGGGATTCTAAGGGTGGGAAAGAACAGACACAAGAGATAAAGTCCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330889.8
CDS-3UTR GCA 90 bp AGATGTTCATCTATGCACCAGATCCTCAGATCCCCGAGGTGGGTTGCGGGGAAGTTACAAGATGCCACTTaGATGATGCTGTGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: RCSSMHQILRSPRWVAGKLQDAT*MMLWVP
Trigger: AGGCACCCACAGCATCATGCAAGTGGCATCTTGTAA...CTTCCCCGCAACCCACCTCGGGGATCTGAGGATCTGGTGCATAGATGAACATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR GCA 90 bp CTGGAATGCAATGGCGCAATCTCACTGCGCCCGGCCATTGACTACTTTATCTTTTGGTCTCAATCCTCCTaGCTCAGCTTCCCAAAGGGC +
Preference number: 4 (lower is better)
Translates to: LECNGAISLRPAIDYFIFWSQSS*LSFPKG
Trigger: GCCCTTTGGGAAGCTGAGGCAGGAGGATTGAGACCA...AAAGATAAAGTAGTCAATGGCCGGGCGCAGTGAGATTGCGCCATTGCATTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
CDS-3UTR GCA 90 bp CATCACACCCAGCCACGGAGAATCAGAGAGTCTCTTAAGAGACCTCCCAGCTCCTGCACATTTTCAAGGTaGTTCCAGAGCCAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: HHTQPRRIRESLKRPPSSCTFSR*FQSQRR
Trigger: TCTCCTCTGGCTCTGGAAGCACCTTGAAAATGTGCA...GGAGCTGGGAGGTCTCTTAAGAGACTCTCTGATTCTCCGTGGCTGGGTGTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330889.8
CDS-3UTR CCA 90 bp TATCTGGGCAGTCGAGAAGCTTCAGGAAGGACACAGGCTTACGCATTGCTTATCAGACCAGGCAGTCGTTaGCCTGGGGGATGTAGTAGA +
Preference number: 4 (lower is better)
Translates to: YLGSREASGRTQAYALLIRPGSR*PGGCSR
Trigger: TCTACTACATCCCCCAGGCCAACGACTGCCTGGTCT...GATAAGCAATGCGTAAGCCTGTGTCCTTCCTGAAGCTTCTCGACTGCCCAGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330889.8
CDS-3UTR CCA 90 bp TGTATGGGGGAGGAGGGGATAGATGTTCATCTATGCACCAGATCCTCAGATCCCCACGAGCTCAGACTCTaGGAGTTCAGGAAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: CMGEEGIDVHLCTRSSDPHELRL*EFRKGH
Trigger: ATGGCCTTTCCTGAACTCCCAGAGTCTGAGCTCGTG...GGGATCTGAGGATCTGGTGCATAGATGAACATCTATCCCCTCCTCCCCCATACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR CCA 90 bp GGGATAGATGTTCATCTATGCACCAGATCCTCAGATCCCCGAGGTGGGTTGCGGCTCGAAGGCATCCAGTaGGTTCTTGTAATAGAGCAG +
Preference number: 4 (lower is better)
Translates to: GIDVHLCTRSSDPRGGLRLEGIQ*VLVIEQ
Trigger: CTGCTCTATTACAAGAACCCACTGGATGCCTTCGAG...CCGCAACCCACCTCGGGGATCTGAGGATCTGGTGCATAGATGAACATCTATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR CCA 90 bp CTTCTCAGAAACTGTGAGTTGTCCCTTCCTCGCTTCCACAGGAATCCTTCTCGGGACAAATCTCCGCTCTaGGGTGACAATGGTGAGTCC +
Preference number: 4 (lower is better)
Translates to: LLRNCELSLPRFHRNPSRDKSPL*GDNGES
Trigger: GGACTCACCATTGTCACCCCAGAGCGGAGATTTGTC...CCGAGAAGGATTCCTGTGGAAGCGAGGAAGGGACAACTCACAGTTTCTGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585130.5
CDS-3UTR CCA 90 bp GCCATCTCTCCTGTAGGTGATCTGCAGCCCATGGGGGTGCCCTATCTTCTCTGTCAGTGTATTTCTGCGTaGTGCTTGAAGACAGAGGAA +
Preference number: 4 (lower is better)
Translates to: AISPVGDLQPMGVPYLLCQCISA*CLKTEE
Trigger: TTCCTCTGTCTTCAAGCACCACGCAGAAATACACTG...ACAGAGAAGATAGGGCACCCCCATGGGCTGCAGATCACCTACAGGAGAGATGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585130.5
CDS-3UTR CCA 90 bp TGTATGGGGGAGGAGGGGATAGATGTTCATCTATGCACCAGATCCTCAGATCCCGACCTCCCAGCTCCTTaGGTCTCCATTGAAGCAAAG +
Preference number: 4 (lower is better)
Translates to: CMGEEGIDVHLCTRSSDPDLPAP*VSIEAK
Trigger: CTTTGCTTCAATGGAGACCCAAGGAGCTGGGAGGTC...GGGATCTGAGGATCTGGTGCATAGATGAACATCTATCCCCTCCTCCCCCATACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
CDS-3UTR CCA 90 bp CTTCTCAGAAACTGTGAGTTGTCCCTTCCTCGCTTCCACAGGAATCCTTCTCGGGACCTCCCAGCTCCTTaGGTCTCCATTGAAGCAAAG +
Preference number: 4 (lower is better)
Translates to: LLRNCELSLPRFHRNPSRDLPAP*VSIEAK
Trigger: CTTTGCTTCAATGGAGACCCAAGGAGCTGGGAGGTC...CCGAGAAGGATTCCTGTGGAAGCGAGGAAGGGACAACTCACAGTTTCTGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585130.5
CDS-3UTR CCA 90 bp CATCACACCCAGCCACGGAGAATCAGAGAGTCTCTTAAGAGACCTCCCAGCTCCGGCAGACAAGTAAACTaGCCCTTAATGCACAACCCA +
Preference number: 4 (lower is better)
Translates to: HHTQPRRIRESLKRPPSSGRQVN*PLMHNP
Trigger: TGGGTTGTGCATTAAGGGCCAGTTTACTTGTCTGCC...GGAGCTGGGAGGTCTCTTAAGAGACTCTCTGATTCTCCGTGGCTGGGTGTGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330889.8
CDS-3UTR TCA 90 bp CTTCTCAGAAACTGTGAGTTGTCCCTTCCTCGCTTCCACAGGAATCCTTCTCGGCCTTCTCAGAAACTGTaGGTTGTCCCTTCCTCGCTT +
Preference number: 4 (lower is better)
Translates to: LLRNCELSLPRFHRNPSRPSQKL*VVPSSL
Trigger: AAGCGAGGAAGGGACAACTCACAGTTTCTGAGAAGG...CCGAGAAGGATTCCTGTGGAAGCGAGGAAGGGACAACTCACAGTTTCTGAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580526.1
ENST00000585130.5
CDS-3UTR TCA 90 bp GGGTCTCCATTGAAGCAAAGAGAGAACATCCAGTGTATTTCTGCGTGGTGCTTGCTGCACGGAGGGCATTaGACCAGTCCACTATCTCCT +
Preference number: 4 (lower is better)
Translates to: GSPLKQRENIQCISAWCLLHGGH*TSPLSP
Trigger: AGGAGATAGTGGACTGGTTCAATGCCCTCCGTGCAG...CAAGCACCACGCAGAAATACACTGGATGTTCTCTCTTTGCTTCAATGGAGACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
CDS-3UTR GCA 90 bp ATGGATAAAGCCACAGCTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCTGCCAGGAGGCCTTCTCTTaGCAGAAGTACAAACTTCCT +
Preference number: 4 (lower is better)
Translates to: MDKATASVLAEFTARNGCQEAFS*QKYKLP
Trigger: AGGAAGTTTGTACTTCTGGCAAGAGAAGGCCTCCTG...GCAGCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAGCTGTGGCTTTATCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000585130.5
CDS-3UTR GCA 90 bp AACCCAGCAAGTGTCCTTGAAAATGCACATTTTCAAGGTGCTTCCAGAGCCAGACAGCCAGGGCCGAGGTaGAAACTTCTTCCCACAAGG +
Preference number: 4 (lower is better)
Translates to: NPASVLENAHFQGASRARQPGPR*KLLPTR
Trigger: CCTTGTGGGAAGAAGTTTGCACCTCGGCCCTGGCTG...TCTGGCTCTGGAAGCACCTTGAAAATGTGCATTTTCAAGGACACTTGCTGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330889.8
CDS-3UTR CCA 90 bp TCATCCCCAGAACTTAGCAGAGTACACCCAACAGAGTTCACAGGTGGTCAAAGATCAGGGAAGTTACGGTaGACGCCGCAGCAGTTGAGA +
Preference number: 4 (lower is better)
Translates to: SSPELSRVHPTEFTGGQRSGKLR*TPQQLR
Trigger: TCTCAACTGCTGCGGCGTCCACCGTAACTTCCCTGA...TCTTTGACCACCTGTGAACTCTGTTGGGTGTACTCTGCTAAGTTCTGGGGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330889.8
CDS-3UTR CCA 90 bp CTATCTCCTTCCCACTTTCATGATACACAAACAGGTTCCTGGTGTGGCCATCTCTCAGGGAAGTTACGGTaGACGCCGCAGCAGTTGAGA +
Preference number: 4 (lower is better)
Translates to: LSPSHFHDTQTGSWCGHLSGKLR*TPQQLR
Trigger: TCTCAACTGCTGCGGCGTCCACCGTAACTTCCCTGA...GAGATGGCCACACCAGGAACCTGTTTGTGTATCATGAAAGTGGGAAGGAGATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580526.1
ENST00000585130.5
CDS-3UTR CCA 90 bp CTGGAATGCAATGGCGCAATCTCACTGCGCCCGGCCATTGACTACTTTATCTTTCACGAGCTCAGACTCTaGGAGTTCAGGAAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: LECNGAISLRPAIDYFIFHELRL*EFRKGH
Trigger: ATGGCCTTTCCTGAACTCCCAGAGTCTGAGCTCGTG...AAAGATAAAGTAGTCAATGGCCGGGCGCAGTGAGATTGCGCCATTGCATTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
CDS-3UTR CCA 90 bp GCCATCTCTCCTGTAGGTGATCTGCAGCCCATGGGGGTGCCCTATCTTCTCTGTAGGTTCTTTCTGCTTTaGCCCAGTCTTTTCCATGAA +
Preference number: 4 (lower is better)
Translates to: AISPVGDLQPMGVPYLLCRFFLL*PSLFHE
Trigger: TTCATGGAAAAGACTGGGCCAAAGCAGAAAGAACCT...ACAGAGAAGATAGGGCACCCCCATGGGCTGCAGATCACCTACAGGAGAGATGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585130.5
CDS-3UTR CCA 90 bp GGAGAATCAGAGAGTCTCTTAAGAGACCTCCCAGCTCCTTGGGTCTCCATTGAATTCCCAAGAAAAACCTaGCCCTGCTCGAAGGCATCC +
Preference number: 4 (lower is better)
Translates to: GESESLLRDLPAPWVSIEFPRKT*PCSKAS
Trigger: GGATGCCTTCGAGCAGGGCCAGGTTTTTCTTGGGAA...TTCAATGGAGACCCAAGGAGCTGGGAGGTCTCTTAAGAGACTCTCTGATTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
CDS-3UTR CCA 90 bp CTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCTGCTGACTGCGGGGCACTGAGAATGCCCCTAATGTaGATTTGTCTGATTATTTCC +
Preference number: 4 (lower is better)
Translates to: LQSWQSSLPGMAADCGALRMPLM*ICLIIS
Trigger: GGAAATAATCAGACAAATCCACATTAGGGGCATTCT...CAGTGCCCCGCAGTCAGCAGCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000584828.5
ENST00000585130.5
CDS-3UTR CCA 90 bp TGGTGGGCAGCCAGGGCCGAGGTGCAAACTTCTTCCCACAAGGAGTTCCAGGTGAGAATGCCCCTAATGTaGATTTGTCTGATTATTTCC +
Preference number: 4 (lower is better)
Translates to: WWAARAEVQTSSHKEFQVRMPLM*ICLIIS
Trigger: GGAAATAATCAGACAAATCCACATTAGGGGCATTCT...CACCTGGAACTCCTTGTGGGAAGAAGTTTGCACCTCGGCCCTGGCTGCCCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000584828.5
ENST00000585130.5
CDS-3UTR CCA 90 bp TGTATGGGGGAGGAGGGGATAGATGTTCATCTATGCACCAGATCCTCAGATCCCCCTATTCAACCTCTGTaGGTCTCAGTTTCCGCGTCT +
Preference number: 4 (lower is better)
Translates to: CMGEEGIDVHLCTRSSDPPIQPL*VSVSAS
Trigger: AGACGCGGAAACTGAGACCCACAGAGGTTGAATAGG...GGGATCTGAGGATCTGGTGCATAGATGAACATCTATCCCCTCCTCCCCCATACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000585130.5
CDS-3UTR TCA 90 bp GGCAGACAAGTAAACTGGCCCTTAATGCACAACCCAGCAAGTGTCCTTGAAAATTCTCACTGGGGCAAGTaGGGACAAATCTCCGCTCTG +
Preference number: 4 (lower is better)
Translates to: GRQVNWPLMHNPASVLENSHWGK*GQISAL
Trigger: CAGAGCGGAGATTTGTCCTCACTTGCCCCAGTGAGA...ATTTTCAAGGACACTTGCTGGGTTGTGCATTAAGGGCCAGTTTACTTGTCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330889.8
CDS-3UTR TCA 90 bp AGGAGGCCTTCTCTTGCCAGAAGTACAAACTTCCTTCTCAGAAACTGTGAGTTGTCTCACTGGGGCAAGTaGGGACAAATCTCCGCTCTG +
Preference number: 4 (lower is better)
Translates to: RRPSLARSTNFLLRNCELSHWGK*GQISAL
Trigger: CAGAGCGGAGATTTGTCCTCACTTGCCCCAGTGAGA...CAACTCACAGTTTCTGAGAAGGAAGTTTGTACTTCTGGCAAGAGAAGGCCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585130.5
CDS-3UTR TCA 90 bp CAGTTAATGGGTCACCTGCTGCTGCGGCCACTCTCTGTTGATGCAGTAAGCCGGTTCACTCTTCATTTTTaGAGAGTCTGGGTCAGATGT +
Preference number: 4 (lower is better)
Translates to: QLMGHLLLRPLSVDAVSRFTLHF*RVWVRC
Trigger: ACATCTGACCCAGACTCTTCAAAAATGAAGAGTGAA...CCGGCTTACTGCATCAACAGAGAGTGGCCGCAGCAGCAGGTGACCCATTAACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585130.5
CDS-3UTR GCA 90 bp GGGGCTTTTACCCTGTTCCTTTGTGAAGTACTTCAGGAGGCCTTCTCTTGCCAGCAGGAGGCCTTCTCTTaGCAGAAGTACAAACTTCCT +
Preference number: 4 (lower is better)
Translates to: GAFTLFLCEVLQEAFSCQQEAFS*QKYKLP
Trigger: AGGAAGTTTGTACTTCTGGCAAGAGAAGGCCTCCTG...CTGGCAAGAGAAGGCCTCCTGAAGTACTTCACAAAGGAACAGGGTAAAAGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580526.1
ENST00000585130.5
CDS-3UTR GCA 90 bp AGGGAGCTGATGGATAAAGCCACAGCTTCAGTCCTGGCAGAGTTCACTGCCAGGATAGATGTTCATCTATaGACCAGATCCTCAGATCCC +
Preference number: 4 (lower is better)
Translates to: RELMDKATASVLAEFTARIDVHL*TRSSDP
Trigger: GGGATCTGAGGATCTGGTGCATAGATGAACATCTAT...CCTGGCAGTGAACTCTGCCAGGACTGAAGCTGTGGCTTTATCCATCAGCTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR GCA 90 bp AGCCACGGAGAATCAGAGAGTCTCTTAAGAGACCTCCCAGCTCCTTGGGTCTCCATAGATGTTCATCTATaGACCAGATCCTCAGATCCC +
Preference number: 4 (lower is better)
Translates to: SHGESESLLRDLPAPWVSIDVHL*TRSSDP
Trigger: GGGATCTGAGGATCTGGTGCATAGATGAACATCTAT...GGAGACCCAAGGAGCTGGGAGGTCTCTTAAGAGACTCTCTGATTCTCCGTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
CDS-3UTR GCA 90 bp AGATGTTCATCTATGCACCAGATCCTCAGATCCCCGAGGTGGGTTGCGGGGAAGTGGGTGCCTTTTCATTaGAATGCCTCCATTTCAGAT +
Preference number: 4 (lower is better)
Translates to: RCSSMHQILRSPRWVAGKWVPFH*NASISD
Trigger: ATCTGAAATGGAGGCATTGCAATGAAAAGGCACCCA...CTTCCCCGCAACCCACCTCGGGGATCTGAGGATCTGGTGCATAGATGAACATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR GCA 90 bp GTGTATGGGGGAGGAGGGGATAGATGTTCATCTATGCACCAGATCCTCAGATCCTTACAAGATGCCACTTaGATGATGCTGTGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: VYGGGGDRCSSMHQILRSLQDAT*MMLWVP
Trigger: AGGCACCCACAGCATCATGCAAGTGGCATCTTGTAA...GGATCTGAGGATCTGGTGCATAGATGAACATCTATCCCCTCCTCCCCCATACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR CCA 90 bp AGGAGGCCTTCTCTTGCCAGAAGTACAAACTTCCTTCTCAGAAACTGTGAGTTGGTGATCTGCAGCCCATaGGGGTGCCCTATCTTCTCT +
Preference number: 4 (lower is better)
Translates to: RRPSLARSTNFLLRNCELVICSP*GCPIFS
Trigger: AGAGAAGATAGGGCACCCCCATGGGCTGCAGATCAC...CAACTCACAGTTTCTGAGAAGGAAGTTTGTACTTCTGGCAAGAGAAGGCCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580526.1
ENST00000585130.5
CDS-3UTR CCA 90 bp GGGTCTCCATTGAAGCAAAGAGAGAACATCCAGTGTATTTCTGCGTGGTGCTTGGTTACAGGCAGTCGTTaGCCTGGGGGATGTAGTAGA +
Preference number: 4 (lower is better)
Translates to: GSPLKQRENIQCISAWCLVTGSR*PGGCSR
Trigger: TCTACTACATCCCCCAGGCCAACGACTGCCTGTAAC...CAAGCACCACGCAGAAATACACTGGATGTTCTCTCTTTGCTTCAATGGAGACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585130.5
3UTR CAA 72 bp GCCAGAAGTACAAACTTCCTTCTCAGAAACTGTGAGTaGTCCCTTCCTCGCTTCCACAGGAATCCTTCTCGG +
Preference number: 4 (lower is better)
Translates to: ARSTNFLLRNCE*SLPRFHRNPSR
Trigger: CCGAGAAGGATTCCTGTGGAAGCGAGGAAGGGACAACTCACAGTTTCTGAGAAGGAAGTTTGTACTTCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580526.1
ENST00000585130.5
CDS-3UTR GCA 90 bp GGAGAATCAGAGAGTCTCTTAAGAGACCTCCCAGCTCCTTGGGTCTCCATTGAACACAGGCTTACGCATTaGTTATCCTTTGATTGGGGG +
Preference number: 4 (lower is better)
Translates to: GESESLLRDLPAPWVSIEHRLTH*LSFDWG
Trigger: CCCCCAATCAAAGGATAAGCAATGCGTAAGCCTGTG...TTCAATGGAGACCCAAGGAGCTGGGAGGTCTCTTAAGAGACTCTCTGATTCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330889.8
CDS-3UTR GCA 90 bp CTGATGGATAAAGCCACAGCTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCTTGTGGATCATAAACTaGAAGACAACAGCAACCTCC +
Preference number: 4 (lower is better)
Translates to: LMDKATASVLAEFTARNGLWIIN*KTTATS
Trigger: GGAGGTTGCTGTTGTCTTGCAGTTTATGATCCACAA...GCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAGCTGTGGCTTTATCCATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580525.5
CDS-3UTR CCA 90 bp AATGCAATGGCGCAATCTCACTGCGCCCGGCCATTGACTACTTTATCTTTCACTACACAAACAGGTTCCTaGTGTGGCCATCTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: NAMAQSHCARPLTTLSFTTQTGS*CGHLSC
Trigger: ACAGGAGAGATGGCCACACCAGGAACCTGTTTGTGT...AGTGAAAGATAAAGTAGTCAATGGCCGGGCGCAGTGAGATTGCGCCATTGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
CDS-3UTR CCA 90 bp CAGATGTTTAGCAGAATGCCCCTAATGTGGATTTGTCTGATTATTTCCTCATGGAGCAGCCTCCGCTCATaGCAATCCAGGGCGAACCAC +
Preference number: 4 (lower is better)
Translates to: QMFSRMPLMWICLIISSWSSLRS*QSRANH
Trigger: GTGGTTCGCCCTGGATTGCCATGAGCGGAGGCTGCT...CCATGAGGAAATAATCAGACAAATCCACATTAGGGGCATTCTGCTAAACATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000584828.5
ENST00000585130.5
CDS-3UTR CCA 90 bp TTTGTGAAGTACTTCAGGAGGCCTTCTCTTGCCAGAAGTACAAACTTCCTTCTCCCACAGCTTCAGTCCTaGCAGAGTTCACTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: FVKYFRRPSLARSTNFLLPQLQS*QSSLPG
Trigger: TCCTGGCAGTGAACTCTGCCAGGACTGAAGCTGTGG...GAGAAGGAAGTTTGTACTTCTGGCAAGAGAAGGCCTCCTGAAGTACTTCACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585130.5
CDS-3UTR CCA 90 bp CTGATGGATAAAGCCACAGCTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCACTTGCATGATGCTGTaGGTGCCTTTTCATTGCAAT +
Preference number: 4 (lower is better)
Translates to: LMDKATASVLAEFTARNGTCMML*VPFHCN
Trigger: ATTGCAATGAAAAGGCACCCACAGCATCATGCAAGT...GCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAGCTGTGGCTTTATCCATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR CCA 90 bp GGAGAATCAGAGAGTCTCTTAAGAGACCTCCCAGCTCCTTGGGTCTCCATTGAAACAGAGCAGGGGACTTaGTGCTCTGTTTCTCTAACA +
Preference number: 4 (lower is better)
Translates to: GESESLLRDLPAPWVSIETEQGT*CSVSLT
Trigger: TGTTAGAGAAACAGAGCACCAAGTCCCCTGCTCTGT...TTCAATGGAGACCCAAGGAGCTGGGAGGTCTCTTAAGAGACTCTCTGATTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
CDS-3UTR GCA 90 bp CTGGGTCAGATGTTTAGCAGAATGCCCCTAATGTGGATTTGTCTGATTATTTCCCCTGGCAGAGTTCACTaGCAGGAATGGCTGCTGACT +
Preference number: 4 (lower is better)
Translates to: LGQMFSRMPLMWICLIISPGRVH*QEWLLT
Trigger: AGTCAGCAGCCATTCCTGGCAGTGAACTCTGCCAGG...GGAAATAATCAGACAAATCCACATTAGGGGCATTCTGCTAAACATCTGACCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000584828.5
ENST00000585130.5
CDS-3UTR GCA 90 bp GTGTATGGGGGAGGAGGGGATAGATGTTCATCTATGCACCAGATCCTCAGATCCTGGGTGCCTTTTCATTaGAATGCCTCCATTTCAGAT +
Preference number: 4 (lower is better)
Translates to: VYGGGGDRCSSMHQILRSWVPFH*NASISD
Trigger: ATCTGAAATGGAGGCATTGCAATGAAAAGGCACCCA...GGATCTGAGGATCTGGTGCATAGATGAACATCTATCCCCTCCTCCCCCATACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR GCA 90 bp TATCTGGGCAGTCGAGAAGCTTCAGGAAGGACACAGGCTTACGCATTGCTTATCGAGCAGGGGACTTGGTaGTCTGTTTCTCTAACATTT +
Preference number: 4 (lower is better)
Translates to: YLGSREASGRTQAYALLIEQGTW*SVSLTF
Trigger: AAATGTTAGAGAAACAGAGCACCAAGTCCCCTGCTC...GATAAGCAATGCGTAAGCCTGTGTCCTTCCTGAAGCTTCTCGACTGCCCAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330889.8
CDS-3UTR CCA 90 bp CTGGAATGCAATGGCGCAATCTCACTGCGCCCGGCCATTGACTACTTTATCTTTGATGTAGTAGAAAGCTaGGACTCTGGCTTCGAACTT +
Preference number: 4 (lower is better)
Translates to: LECNGAISLRPAIDYFIFDVVES*DSGFEL
Trigger: AAGTTCGAAGCCAGAGTCCCAGCTTTCTACTACATC...AAAGATAAAGTAGTCAATGGCCGGGCGCAGTGAGATTGCGCCATTGCATTCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
CDS-3UTR CCA 90 bp GTGTATGGGGGAGGAGGGGATAGATGTTCATCTATGCACCAGATCCTCAGATCCAGGTTCTTTCTGCTTTaGCCCAGTCTTTTCCATGAA +
Preference number: 4 (lower is better)
Translates to: VYGGGGDRCSSMHQILRSRFFLL*PSLFHE
Trigger: TTCATGGAAAAGACTGGGCCAAAGCAGAAAGAACCT...GGATCTGAGGATCTGGTGCATAGATGAACATCTATCCCCTCCTCCCCCATACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000584828.5
ENST00000585130.5
CDS-3UTR TCA 90 bp CAGATGTTTAGCAGAATGCCCCTAATGTGGATTTGTCTGATTATTTCCTCATGGGAAGGCCCAGGGAGCTaGTGGATAAAGCCACAGCTT +
Preference number: 4 (lower is better)
Translates to: QMFSRMPLMWICLIISSWEGPGS*WIKPQL
Trigger: AAGCTGTGGCTTTATCCATCAGCTCCCTGGGCCTTC...CCATGAGGAAATAATCAGACAAATCCACATTAGGGGCATTCTGCTAAACATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000584828.5
ENST00000585130.5
CDS-3UTR TCA 90 bp GTGAAGTACTTCAGGAGGCCTTCTCTTGCCAGAAGTACAAACTTCCTTCTCAGATTTCTGCGTGGTGCTTaGAGACAGAGGAAAGGAACA +
Preference number: 4 (lower is better)
Translates to: VKYFRRPSLARSTNFLLRFLRGA*RQRKGT
Trigger: TGTTCCTTTCCTCTGTCTTCAAGCACCACGCAGAAA...TCTGAGAAGGAAGTTTGTACTTCTGGCAAGAGAAGGCCTCCTGAAGTACTTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585130.5
CDS-3UTR TCA 90 bp AACCCAGCAAGTGTCCTTGAAAATGCACATTTTCAAGGTGCTTCCAGAGCCAGATCCTTGGGTCTCCATTaGAGCAAAGAGAGAACATCC +
Preference number: 4 (lower is better)
Translates to: NPASVLENAHFQGASRARSLGLH*SKERTS
Trigger: GGATGTTCTCTCTTTGCTTCAATGGAGACCCAAGGA...TCTGGCTCTGGAAGCACCTTGAAAATGTGCATTTTCAAGGACACTTGCTGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330889.8
CDS-3UTR TCA 90 bp GGGTCTCCATTGAAGCAAAGAGAGAACATCCAGTGTATTTCTGCGTGGTGCTTGGCATTGCTTATCCTTTaGTTGGGGGATCCAAAGGAA +
Preference number: 4 (lower is better)
Translates to: GSPLKQRENIQCISAWCLALLIL*LGDPKE
Trigger: TTCCTTTGGATCCCCCAATCAAAGGATAAGCAATGC...CAAGCACCACGCAGAAATACACTGGATGTTCTCTCTTTGCTTCAATGGAGACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330889.8
CDS-3UTR GCA 90 bp GGTCAGATGTTTAGCAGAATGCCCCTAATGTGGATTTGTCTGATTATTTCCTCAGCCATTTTTAGGTACTaGAGACGGGCTGCACGGAGG +
Preference number: 4 (lower is better)
Translates to: GQMFSRMPLMWICLIISSAIFRY*RRAARR
Trigger: CCTCCGTGCAGCCCGTCTGCAGTACCTAAAAATGGC...TGAGGAAATAATCAGACAAATCCACATTAGGGGCATTCTGCTAAACATCTGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000584828.5
ENST00000585130.5
CDS-3UTR GCA 90 bp GGTCAGATGTTTAGCAGAATGCCCCTAATGTGGATTTGTCTGATTATTTCCTCAAGAAAAACCTGGCCCTaGTCGAAGGCATCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: GQMFSRMPLMWICLIISSRKTWP*SKASSG
Trigger: CCCACTGGATGCCTTCGAGCAGGGCCAGGTTTTTCT...TGAGGAAATAATCAGACAAATCCACATTAGGGGCATTCTGCTAAACATCTGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000584828.5
ENST00000585130.5
CDS-3UTR GCA 90 bp CAGATGTTTAGCAGAATGCCCCTAATGTGGATTTGTCTGATTATTTCCTCATGGCCTGGCAGAGTTCACTaGCAGGAATGGCTGCTGACT +
Preference number: 4 (lower is better)
Translates to: QMFSRMPLMWICLIISSWPGRVH*QEWLLT
Trigger: AGTCAGCAGCCATTCCTGGCAGTGAACTCTGCCAGG...CCATGAGGAAATAATCAGACAAATCCACATTAGGGGCATTCTGCTAAACATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000584828.5
ENST00000585130.5
CDS-3UTR GCA 90 bp AACCCAGCAAGTGTCCTTGAAAATGCACATTTTCAAGGTGCTTCCAGAGCCAGATTACAAGATGCCACTTaGATGATGCTGTGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: NPASVLENAHFQGASRARLQDAT*MMLWVP
Trigger: AGGCACCCACAGCATCATGCAAGTGGCATCTTGTAA...TCTGGCTCTGGAAGCACCTTGAAAATGTGCATTTTCAAGGACACTTGCTGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330889.8
CDS-3UTR GCA 90 bp CTATCTCCTTCCCACTTTCATGATACACAAACAGGTTCCTGGTGTGGCCATCTCGAGCAGGGGACTTGGTaGTCTGTTTCTCTAACATTT +
Preference number: 4 (lower is better)
Translates to: LSPSHFHDTQTGSWCGHLEQGTW*SVSLTF
Trigger: AAATGTTAGAGAAACAGAGCACCAAGTCCCCTGCTC...GAGATGGCCACACCAGGAACCTGTTTGTGTATCATGAAAGTGGGAAGGAGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585130.5
CDS-3UTR GCA 90 bp TCATCCCCAGAACTTAGCAGAGTACACCCAACAGAGTTCACAGGTGGTCAAAGACATCCAGTGTATTTCTaGGTGGTGCTTGAAGACAGA +
Preference number: 4 (lower is better)
Translates to: SSPELSRVHPTEFTGGQRHPVYF*VVLEDR
Trigger: TCTGTCTTCAAGCACCACGCAGAAATACACTGGATG...TCTTTGACCACCTGTGAACTCTGTTGGGTGTACTCTGCTAAGTTCTGGGGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330889.8
CDS-3UTR CCA 90 bp TCCTTTGTGAAGTACTTCAGGAGGCCTTCTCTTGCCAGAAGTACAAACTTCCTTACACAAACAGGTTCCTaGTGTGGCCATCTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: SFVKYFRRPSLARSTNFLTQTGS*CGHLSC
Trigger: ACAGGAGAGATGGCCACACCAGGAACCTGTTTGTGT...AAGGAAGTTTGTACTTCTGGCAAGAGAAGGCCTCCTGAAGTACTTCACAAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580526.1
ENST00000585130.5
CDS-3UTR CCA 90 bp AGTCTGGGTCAGATGTTTAGCAGAATGCCCCTAATGTGGATTTGTCTGATTATTGTTCCTGGTGAGGAATaGCACGAGCTCAGACTCTGG +
Preference number: 4 (lower is better)
Translates to: SLGQMFSRMPLMWICLIIVPGEE*HELRLW
Trigger: CCAGAGTCTGAGCTCGTGCCATTCCTCACCAGGAAC...AATAATCAGACAAATCCACATTAGGGGCATTCTGCTAAACATCTGACCCAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000584828.5
ENST00000585130.5
CDS-3UTR CCA 90 bp GGAGAATCAGAGAGTCTCTTAAGAGACCTCCCAGCTCCTTGGGTCTCCATTGAAAGGTTCTTTCTGCTTTaGCCCAGTCTTTTCCATGAA +
Preference number: 4 (lower is better)
Translates to: GESESLLRDLPAPWVSIERFFLL*PSLFHE
Trigger: TTCATGGAAAAGACTGGGCCAAAGCAGAAAGAACCT...TTCAATGGAGACCCAAGGAGCTGGGAGGTCTCTTAAGAGACTCTCTGATTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
CDS-3UTR CCA 90 bp CTGGAATGCAATGGCGCAATCTCACTGCGCCCGGCCATTGACTACTTTATCTTTTGCTTATCCTTTGATTaGGGGATCCAAAGGAAAGTC +
Preference number: 4 (lower is better)
Translates to: LECNGAISLRPAIDYFIFCLSFD*GIQRKV
Trigger: GACTTTCCTTTGGATCCCCCAATCAAAGGATAAGCA...AAAGATAAAGTAGTCAATGGCCGGGCGCAGTGAGATTGCGCCATTGCATTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330889.8
CDS-3UTR GCA 90 bp GGGTCTCCATTGAAGCAAAGAGAGAACATCCAGTGTATTTCTGCGTGGTGCTTGTGGGTGCCTTTTCATTaGAATGCCTCCATTTCAGAT +
Preference number: 4 (lower is better)
Translates to: GSPLKQRENIQCISAWCLWVPFH*NASISD
Trigger: ATCTGAAATGGAGGCATTGCAATGAAAAGGCACCCA...CAAGCACCACGCAGAAATACACTGGATGTTCTCTCTTTGCTTCAATGGAGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
CDS-3UTR GCA 90 bp TTTGTGAAGTACTTCAGGAGGCCTTCTCTTGCCAGAAGTACAAACTTCCTTCTCTTACAAGATGCCACTTaGATGATGCTGTGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: FVKYFRRPSLARSTNFLLLQDAT*MMLWVP
Trigger: AGGCACCCACAGCATCATGCAAGTGGCATCTTGTAA...GAGAAGGAAGTTTGTACTTCTGGCAAGAGAAGGCCTCCTGAAGTACTTCACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585130.5
CDS-3UTR CCA 90 bp TTTGTGAAGTACTTCAGGAGGCCTTCTCTTGCCAGAAGTACAAACTTCCTTCTCCTCGAAGGCATCCAGTaGGTTCTTGTAATAGAGCAG +
Preference number: 4 (lower is better)
Translates to: FVKYFRRPSLARSTNFLLLEGIQ*VLVIEQ
Trigger: CTGCTCTATTACAAGAACCCACTGGATGCCTTCGAG...GAGAAGGAAGTTTGTACTTCTGGCAAGAGAAGGCCTCCTGAAGTACTTCACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585130.5
CDS-3UTR CCA 90 bp GGCAGACAAGTAAACTGGCCCTTAATGCACAACCCAGCAAGTGTCCTTGAAAATCAGTGTATTTCTGCGTaGTGCTTGAAGACAGAGGAA +
Preference number: 4 (lower is better)
Translates to: GRQVNWPLMHNPASVLENQCISA*CLKTEE
Trigger: TTCCTCTGTCTTCAAGCACCACGCAGAAATACACTG...ATTTTCAAGGACACTTGCTGGGTTGTGCATTAAGGGCCAGTTTACTTGTCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330889.8
CDS-3UTR CCA 90 bp CAGATGTTTAGCAGAATGCCCCTAATGTGGATTTGTCTGATTATTTCCTCATGGACTCACCTCCCTATCTaGGCAGTCGAGAAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: QMFSRMPLMWICLIISSWTHLPI*AVEKLQ
Trigger: CTGAAGCTTCTCGACTGCCCAGATAGGGAGGTGAGT...CCATGAGGAAATAATCAGACAAATCCACATTAGGGGCATTCTGCTAAACATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330889.8
3UTR CAA 72 bp TTCAGGAAGGACACAGGCTTACGCATTGCTTATCCTTaGATTGGGGGATCCAAAGGAAAGTCCCATACAATG +
Preference number: 4 (lower is better)
Translates to: FRKDTGLRIAYP*IGGSKGKSHTM
Trigger: CATTGTATGGGACTTTCCTTTGGATCCCCCAATCAAAGGATAAGCAATGCGTAAGCCTGTGTCCTTCCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330889.8
CDS-3UTR TCA 90 bp CAGATGTTTAGCAGAATGCCCCTAATGTGGATTTGTCTGATTATTTCCTCATGGCCTTCTCAGAAACTGTaGGTTGTCCCTTCCTCGCTT +
Preference number: 4 (lower is better)
Translates to: QMFSRMPLMWICLIISSWPSQKL*VVPSSL
Trigger: AAGCGAGGAAGGGACAACTCACAGTTTCTGAGAAGG...CCATGAGGAAATAATCAGACAAATCCACATTAGGGGCATTCTGCTAAACATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
CDS-3UTR CCA 90 bp AGTCTGGGTCAGATGTTTAGCAGAATGCCCCTAATGTGGATTTGTCTGATTATTGTTCCAGGTGTTCAGTaGCAGCCAGTTCCTCAGTTA +
Preference number: 4 (lower is better)
Translates to: SLGQMFSRMPLMWICLIIVPGVQ*QPVPQL
Trigger: TAACTGAGGAACTGGCTGCCACTGAACACCTGGAAC...AATAATCAGACAAATCCACATTAGGGGCATTCTGCTAAACATCTGACCCAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000584828.5
ENST00000585130.5
CDS-3UTR CCA 90 bp AGGAGGCCTTCTCTTGCCAGAAGTACAAACTTCCTTCTCAGAAACTGTGAGTTGACTTGCATGATGCTGTaGGTGCCTTTTCATTGCAAT +
Preference number: 4 (lower is better)
Translates to: RRPSLARSTNFLLRNCELTCMML*VPFHCN
Trigger: ATTGCAATGAAAAGGCACCCACAGCATCATGCAAGT...CAACTCACAGTTTCTGAGAAGGAAGTTTGTACTTCTGGCAAGAGAAGGCCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585130.5
3UTR CAA 72 bp TCTTGTGTCTGTTCTTTCCCACCCTTAGAATCCCAGTaGGCCTCTTCAAGTAGCTTTGTTACTGCCTATCTA +
Preference number: 4 (lower is better)
Translates to: SCVCSFPPLESQ*ASSSSFVTAYL
Trigger: TAGATAGGCAGTAACAAAGCTACTTGAAGAGGCCAACTGGGATTCTAAGGGTGGGAAAGAACAGACACAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330889.8
3UTR CAA 72 bp AAGGTGGCATTCAAGTCCTTAATGCTGATGACAGCTTaGGGGCTTTTACCCTGTTCCTTTGTGAAGTACTTC +
Preference number: 4 (lower is better)
Translates to: KVAFKSLMLMTA*GLLPCSFVKYF
Trigger: GAAGTACTTCACAAAGGAACAGGGTAAAAGCCCCAAAGCTGTCATCAGCATTAAGGACTTGAATGCCACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580526.1
ENST00000585130.5
CDS-3UTR CCA 90 bp CTGGGTCAGATGTTTAGCAGAATGCCCCTAATGTGGATTTGTCTGATTATTTCCGATGTAGTAGAAAGCTaGGACTCTGGCTTCGAACTT +
Preference number: 4 (lower is better)
Translates to: LGQMFSRMPLMWICLIISDVVES*DSGFEL
Trigger: AAGTTCGAAGCCAGAGTCCCAGCTTTCTACTACATC...GGAAATAATCAGACAAATCCACATTAGGGGCATTCTGCTAAACATCTGACCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
CDS-3UTR CCA 90 bp GGTCAGATGTTTAGCAGAATGCCCCTAATGTGGATTTGTCTGATTATTTCCTCAACAGAGCAGGGGACTTaGTGCTCTGTTTCTCTAACA +
Preference number: 4 (lower is better)
Translates to: GQMFSRMPLMWICLIISSTEQGT*CSVSLT
Trigger: TGTTAGAGAAACAGAGCACCAAGTCCCCTGCTCTGT...TGAGGAAATAATCAGACAAATCCACATTAGGGGCATTCTGCTAAACATCTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
3UTR CAA 72 bp CCGGCCATTGACTACTTTATCTTTCACTCTTCATTTTaGAAGAGTCTGGGTCAGATGTTTAGCAGAATGCCC +
Preference number: 4 (lower is better)
Translates to: PAIDYFIFHSSF*KSLGQMFSRMP
Trigger: GGGCATTCTGCTAAACATCTGACCCAGACTCTTCAAAAATGAAGAGTGAAAGATAAAGTAGTCAATGGCCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
CDS-3UTR GCA 90 bp CAGATGTTTAGCAGAATGCCCCTAATGTGGATTTGTCTGATTATTTCCTCATGGATAGATGTTCATCTATaGACCAGATCCTCAGATCCC +
Preference number: 4 (lower is better)
Translates to: QMFSRMPLMWICLIISSWIDVHL*TRSSDP
Trigger: GGGATCTGAGGATCTGGTGCATAGATGAACATCTAT...CCATGAGGAAATAATCAGACAAATCCACATTAGGGGCATTCTGCTAAACATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000584828.5
ENST00000585130.5
CDS-3UTR CCA 90 bp GGTCAGATGTTTAGCAGAATGCCCCTAATGTGGATTTGTCTGATTATTTCCTCAACTTGCATGATGCTGTaGGTGCCTTTTCATTGCAAT +
Preference number: 4 (lower is better)
Translates to: GQMFSRMPLMWICLIISSTCMML*VPFHCN
Trigger: ATTGCAATGAAAAGGCACCCACAGCATCATGCAAGT...TGAGGAAATAATCAGACAAATCCACATTAGGGGCATTCTGCTAAACATCTGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000584828.5
ENST00000585130.5
CDS-3UTR CCA 90 bp AGTCTGGGTCAGATGTTTAGCAGAATGCCCCTAATGTGGATTTGTCTGATTATTACTTGCATGATGCTGTaGGTGCCTTTTCATTGCAAT +
Preference number: 4 (lower is better)
Translates to: SLGQMFSRMPLMWICLIITCMML*VPFHCN
Trigger: ATTGCAATGAAAAGGCACCCACAGCATCATGCAAGT...AATAATCAGACAAATCCACATTAGGGGCATTCTGCTAAACATCTGACCCAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000584828.5
ENST00000585130.5
CDS-3UTR CCA 90 bp TTAGGACTTTATCTCTTGTGTCTGTTCTTTCCCACCCTTAGAATCCCAGTTGGCAGAATGCCCCTAATGTaGATTTGTCTGATTATTTCC +
Preference number: 4 (lower is better)
Translates to: LGLYLLCLFFPTLRIPVGRMPLM*ICLIIS
Trigger: GGAAATAATCAGACAAATCCACATTAGGGGCATTCT...GCCAACTGGGATTCTAAGGGTGGGAAAGAACAGACACAAGAGATAAAGTCCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330889.8
CDS GCA 90 bp CCCAGCGGCTCTCAGGAGTCGGTAGGGGCAAGAACGTTTCCCCGGTaGAGTGGAAGAAGACTGCGGGCCAGCCAGGGACTCGGGATCCGG +
Preference number: 5 (lower is better)
Translates to: PSGSQESVGARTFPR*SGRRLRASQGLGIR
Trigger: CCGGATCCCGAGTCCCTGGCTGGCCCGCAGTCTTCTTCCACTGCACCGGGGAAACGTTCTTGCCCCTACCGACTCCTGAGAGCCGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583688.1
CDS-3UTR CAA 90 bp TCTATGCACCAGATCCTCAGATCCCCGAGGTGGGTTGCGGGGAAGGCCCAGGGAGATGCAGTAAGCCGGTaGAGGGGCGTCAAGGGGCTG +
Preference number: 5 (lower is better)
Translates to: SMHQILRSPRWVAGKAQGDAVSR*RGVKGL
Trigger: CAGCCCCTTGACGCCCCTCAACCGGCTTACTGCATC...TCCCTGGGCCTTCCCCGCAACCCACCTCGGGGATCTGAGGATCTGGTGCATAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000585130.5
CDS CCA 90 bp CTGAGGATAGAGGTCAGGGGCCAGCCCAGCCCAAACCAAAGGAGCTaGCCAGTCCCACTGGTTCTCCAGCCCAGCCTCCTCAGTCAGACA +
Preference number: 5 (lower is better)
Translates to: LRIEVRGQPSPNQRS*PVPLVLQPSLLSQT
Trigger: TGTCTGACTGAGGAGGCTGGGCTGGAGAACCAGTGGGACTGGCCAGCTCCTTTGGTTTGGGCTGGGCTGGCCCCTGACCTCTATCCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470962.1
ENST00000480980.1
CDS-3UTR CAA 90 bp TGTTCATCTATGCACCAGATCCTCAGATCCCCGAGGTGGGTTGCGGGGAAGGCCTCCAGCAGCCGCTTCTaGTTGCGCTCGCGATCGCCC +
Preference number: 5 (lower is better)
Translates to: CSSMHQILRSPRWVAGKASSSRF*LRSRSP
Trigger: GGGCGATCGCGAGCGCAACAAGAAGCGGCTGCTGGA...GGCCTTCCCCGCAACCCACCTCGGGGATCTGAGGATCTGGTGCATAGATGAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000585130.5
CDS-3UTR CAA 90 bp GTGGCCATCTCTCCTGTAGGTGATCTGCAGCCCATGGGGGTGCCCTATCTTCTCTCCAGCAGCCGCTTCTaGTTGCGCTCGCGATCGCCC +
Preference number: 5 (lower is better)
Translates to: VAISPVGDLQPMGVPYLLSSSRF*LRSRSP
Trigger: GGGCGATCGCGAGCGCAACAAGAAGCGGCTGCTGGA...GAGAAGATAGGGCACCCCCATGGGCTGCAGATCACCTACAGGAGAGATGGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000580526.1
ENST00000585130.5
CDS CCA 90 bp TGGGTCTCAGTTTCCGCGTCTGATCCCGCTCCCGGCGCCACAGGCTaGGCCCCAACAGGAGCTCCTCAATCTAAGTGTCTAGGAGAAACC +
Preference number: 5 (lower is better)
Translates to: WVSVSASDPAPGATG*APTGAPQSKCLGET
Trigger: GGTTTCTCCTAGACACTTAGATTGAGGAGCTCCTGTTGGGGCCCAGCCTGTGGCGCCGGGAGCGGGATCAGACGCGGAAACTGAGACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583688.1
CDS CCA 90 bp CCCCGAGCTCCGCCGACGCGCGGGGAGGGACAGGAGCACGCAAATTaGAGTTTAACACACTGGCCTGAGATCAAATCGTGGCCTGTCACT +
Preference number: 5 (lower is better)
Translates to: PRAPPTRGEGQEHAN*SLTHWPEIKSWPVT
Trigger: AGTGACAGGCCACGATTTGATCTCAGGCCAGTGTGTTAAACTCCAATTTGCGTGCTCCTGTCCCTCCCCGCGCGTCGGCGGAGCTCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585130.5
CDS CCA 90 bp TTCTCCAGCCCAGCCTCCTCAGTCAGACATCCTAGTGCTTCTCCCTaGGGCCTGGATAGGAGCCCTCAGGCTCTGAAGGTTCTGCCCATT +
Preference number: 5 (lower is better)
Translates to: FSSPASSVRHPSASP*GLDRSPQALKVLPI
Trigger: AATGGGCAGAACCTTCAGAGCCTGAGGGCTCCTATCCAGGCCCCAGGGAGAAGCACTAGGATGTCTGACTGAGGAGGCTGGGCTGGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470962.1
ENST00000480980.1
CDS-3UTR CAA 90 bp TCTATGCACCAGATCCTCAGATCCCCGAGGTGGGTTGCGGGGAAGGCCCAGGGAACTCTGGCTTCGAACTaGGCCTTCACACGGAGGTTT +
Preference number: 5 (lower is better)
Translates to: SMHQILRSPRWVAGKAQGTLASN*AFTRRF
Trigger: AAACCTCCGTGTGAAGGCCAAGTTCGAAGCCAGAGT...TCCCTGGGCCTTCCCCGCAACCCACCTCGGGGATCTGAGGATCTGGTGCATAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000585130.5
CDS-3UTR CAA 90 bp GGTGGGCAGCCAGGGCCGAGGTGCAAACTTCTTCCCACAAGGAGTTCCAGGTGTATGCTGATGACAGCTTaGGGGCTTTTACCCTGTTCC +
Preference number: 5 (lower is better)
Translates to: GGQPGPRCKLLPTRSSRCMLMTA*GLLPCS
Trigger: GGAACAGGGTAAAAGCCCCAAAGCTGTCATCAGCAT...ACACCTGGAACTCCTTGTGGGAAGAAGTTTGCACCTCGGCCCTGGCTGCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000585130.5
CDS-3UTR CAA 90 bp GTGTATGGGGGAGGAGGGGATAGATGTTCATCTATGCACCAGATCCTCAGATCCGATGCAGTAAGCCGGTaGAGGGGCGTCAAGGGGCTG +
Preference number: 5 (lower is better)
Translates to: VYGGGGDRCSSMHQILRSDAVSR*RGVKGL
Trigger: CAGCCCCTTGACGCCCCTCAACCGGCTTACTGCATC...GGATCTGAGGATCTGGTGCATAGATGAACATCTATCCCCTCCTCCCCCATACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000585130.5
CDS CCA 90 bp CCAGGCAGTCGTTGGCCTGGGGGATGTAGTAGAAAGCTGGGACTCTaGCTTCGAACTTGGCCTTCACACGGAGGTTTCCATTGTGGATCA +
Preference number: 5 (lower is better)
Translates to: PGSRWPGGCSRKLGL*LRTWPSHGGFHCGS
Trigger: TGATCCACAATGGAAACCTCCGTGTGAAGGCCAAGTTCGAAGCCAGAGTCCCAGCTTTCTACTACATCCCCCAGGCCAACGACTGCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000581285.5
CDS-3UTR CAA 90 bp AATGCAATGGCGCAATCTCACTGCGCCCGGCCATTGACTACTTTATCTTTCACTTCCAGCAGCCGCTTCTaGTTGCGCTCGCGATCGCCC +
Preference number: 5 (lower is better)
Translates to: NAMAQSHCARPLTTLSFTSSSRF*LRSRSP
Trigger: GGGCGATCGCGAGCGCAACAAGAAGCGGCTGCTGGA...AGTGAAAGATAAAGTAGTCAATGGCCGGGCGCAGTGAGATTGCGCCATTGCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
CDS-3UTR CAA 90 bp GGTCAGATGTTTAGCAGAATGCCCCTAATGTGGATTTGTCTGATTATTTCCTCATCGGCGCAGTGCGCGTaGCCTGTGTCCGGCGCCCGC +
Preference number: 5 (lower is better)
Translates to: GQMFSRMPLMWICLIISSSAQCA*PVSGAR
Trigger: GCGGGCGCCGGACACAGGCAACGCGCACTGCGCCGA...TGAGGAAATAATCAGACAAATCCACATTAGGGGCATTCTGCTAAACATCTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
CDS-3UTR CAA 90 bp CACAGCTTCAGTCCTGGCAGAGTTCACTGCCAGGAATGGCTGCTGACTGCGGGGCTCCTTGGGTCTCCATaGAAGCAAAGAGAGAACATC +
Preference number: 5 (lower is better)
Translates to: HSFSPGRVHCQEWLLTAGLLGSP*KQRENI
Trigger: GATGTTCTCTCTTTGCTTCAATGGAGACCCAAGGAG...CCCCGCAGTCAGCAGCCATTCCTGGCAGTGAACTCTGCCAGGACTGAAGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
CDS-3UTR CAA 90 bp CACACCCAGCCACGGAGAATCAGAGAGTCTCTTAAGAGACCTCCCAGCTCCTTGATCGTGGCCTGTCACTaGGTAGCTACGAGACTGTGG +
Preference number: 5 (lower is better)
Translates to: HTQPRRIRESLKRPPSSLIVACH*VATRLW
Trigger: CCACAGTCTCGTAGCTACCAAGTGACAGGCCACGAT...CAAGGAGCTGGGAGGTCTCTTAAGAGACTCTCTGATTCTCCGTGGCTGGGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585130.5
CDS-3UTR CAA 90 bp TCTATGCACCAGATCCTCAGATCCCCGAGGTGGGTTGCGGGGAAGGCCCAGGGAACACGGAGGTTTCCATaGTGGATCATAAACTGCAAG +
Preference number: 5 (lower is better)
Translates to: SMHQILRSPRWVAGKAQGTRRFP*WIINCK
Trigger: CTTGCAGTTTATGATCCACAATGGAAACCTCCGTGT...TCCCTGGGCCTTCCCCGCAACCCACCTCGGGGATCTGAGGATCTGGTGCATAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580525.5
CDS CCA 90 bp ACAGGCAGTCGTTGGCCTGGGGGATGTAGTAGAAAGCTGGGACTCTaGCTTCGAACTTGGCCTTCACACGGAGGTTTCCATTGTGGATCA +
Preference number: 5 (lower is better)
Translates to: TGSRWPGGCSRKLGL*LRTWPSHGGFHCGS
Trigger: TGATCCACAATGGAAACCTCCGTGTGAAGGCCAAGTTCGAAGCCAGAGTCCCAGCTTTCTACTACATCCCCCAGGCCAACGACTGCCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585130.5
CDS CCA 90 bp TCTCGGTTACAGGCAGTCGTTGGCCTGGGGGATGTAGTAGAAAGCTaGGACTCTGGCTTCGAACTTGGCCTTCACACGGAGGTTTCCATT +
Preference number: 5 (lower is better)
Translates to: SRLQAVVGLGDVVES*DSGFELGLHTEVSI
Trigger: AATGGAAACCTCCGTGTGAAGGCCAAGTTCGAAGCCAGAGTCCCAGCTTTCTACTACATCCCCCAGGCCAACGACTGCCTGTAACCGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585130.5
CDS-3UTR CAA 90 bp CCCTGCTCCTTGTTCCCAAGAAAAACCTGGCCCTGCTCGAAGGCATCCAGTGGGACACGGAGGTTTCCATaGTGGATCATAAACTCCACA +
Preference number: 5 (lower is better)
Translates to: PCSLFPRKTWPCSKASSGTRRFP*WIINST
Trigger: TGTGGAGTTTATGATCCACAATGGAAACCTCCGTGT...CCCACTGGATGCCTTCGAGCAGGGCCAGGTTTTTCTTGGGAACAAGGAGCAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585130.5
CDS-3UTR CAA 90 bp TGGTGGGCAGCCAGGGCCGAGGTGCAAACTTCTTCCCACAAGGAGTTCCAGGTGACCCAGCAAGTGTCCTaGAAAATGCACATTTTCAAG +
Preference number: 5 (lower is better)
Translates to: WWAARAEVQTSSHKEFQVTQQVS*KMHIFK
Trigger: CTTGAAAATGTGCATTTTCAAGGACACTTGCTGGGT...CACCTGGAACTCCTTGTGGGAAGAAGTTTGCACCTCGGCCCTGGCTGCCCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330889.8
CDS-3UTR CAA 90 bp TGTATGGGGGAGGAGGGGATAGATGTTCATCTATGCACCAGATCCTCAGATCCCACTCTGGCTTCGAACTaGGCCTTCACACGGAGGTTT +
Preference number: 5 (lower is better)
Translates to: CMGEEGIDVHLCTRSSDPTLASN*AFTRRF
Trigger: AAACCTCCGTGTGAAGGCCAAGTTCGAAGCCAGAGT...GGGATCTGAGGATCTGGTGCATAGATGAACATCTATCCCCTCCTCCCCCATACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000585130.5
CDS-3UTR CAA 90 bp TGTATGGGGGAGGAGGGGATAGATGTTCATCTATGCACCAGATCCTCAGATCCCCTCAGAAACTGTGAGTaGTCCCTTCCTCGCTTCCAC +
Preference number: 5 (lower is better)
Translates to: CMGEEGIDVHLCTRSSDPLRNCE*SLPRFH
Trigger: GTGGAAGCGAGGAAGGGACAACTCACAGTTTCTGAG...GGGATCTGAGGATCTGGTGCATAGATGAACATCTATCCCCTCCTCCCCCATACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000585130.5
CDS-3UTR CAA 90 bp GGGGCTTTTACCCTGTTCCTTTGTGAAGTACTTCAGGAGGCCTTCTCTTGCCAGCTCAGAAACTGTGAGTaGTCCCTTCCTCGCTTCCAC +
Preference number: 5 (lower is better)
Translates to: GAFTLFLCEVLQEAFSCQLRNCE*SLPRFH
Trigger: GTGGAAGCGAGGAAGGGACAACTCACAGTTTCTGAG...CTGGCAAGAGAAGGCCTCCTGAAGTACTTCACAAAGGAACAGGGTAAAAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580526.1
ENST00000585130.5
CDS-3UTR CAA 90 bp CACACCCAGCCACGGAGAATCAGAGAGTCTCTTAAGAGACCTCCCAGCTCCTTGATTTCTGCGTGGTGCTaGAAGACAGAGGAAAGGAAC +
Preference number: 5 (lower is better)
Translates to: HTQPRRIRESLKRPPSSLISAWC*KTEERN
Trigger: GTTCCTTTCCTCTGTCTTCAAGCACCACGCAGAAAT...CAAGGAGCTGGGAGGTCTCTTAAGAGACTCTCTGATTCTCCGTGGCTGGGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
CDS-3UTR CAA 90 bp TTAATGGGTCACCTGCTGCTGCGGCCACTCTCTGTTGATGCAGTAAGCCGGTTGATTTCTGCGTGGTGCTaGAAGACAGAGGAAAGGAAC +
Preference number: 5 (lower is better)
Translates to: LMGHLLLRPLSVDAVSRLISAWC*KTEERN
Trigger: GTTCCTTTCCTCTGTCTTCAAGCACCACGCAGAAAT...CAACCGGCTTACTGCATCAACAGAGAGTGGCCGCAGCAGCAGGTGACCCATTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585130.5
CDS-3UTR CAA 90 bp AGCCACGGAGAATCAGAGAGTCTCTTAAGAGACCTCCCAGCTCCTTGGGTCTCCCGCATTGCTTATCCTTaGATTGGGGGATCCAAAGGA +
Preference number: 5 (lower is better)
Translates to: SHGESESLLRDLPAPWVSRIAYP*IGGSKG
Trigger: TCCTTTGGATCCCCCAATCAAAGGATAAGCAATGCG...GGAGACCCAAGGAGCTGGGAGGTCTCTTAAGAGACTCTCTGATTCTCCGTGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330889.8
CDS-3UTR CAA 90 bp TTGCGGGGAAGGCCCAGGGAGCTGATGGATAAAGCCACAGCTTCAGTCCTGGCATTAGGACTTTATCTCTaGTGTCTGTTCTTTCCCACC +
Preference number: 5 (lower is better)
Translates to: LRGRPRELMDKATASVLALGLYL*CLFFPT
Trigger: GGTGGGAAAGAACAGACACAAGAGATAAAGTCCTAA...TGCCAGGACTGAAGCTGTGGCTTTATCCATCAGCTCCCTGGGCCTTCCCCGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330889.8
CDS-3UTR CAA 90 bp GGTCAGATGTTTAGCAGAATGCCCCTAATGTGGATTTGTCTGATTATTTCCTCATCCAGCAGCCGCTTCTaGTTGCGCTCGCGATCGCCC +
Preference number: 5 (lower is better)
Translates to: GQMFSRMPLMWICLIISSSSSRF*LRSRSP
Trigger: GGGCGATCGCGAGCGCAACAAGAAGCGGCTGCTGGA...TGAGGAAATAATCAGACAAATCCACATTAGGGGCATTCTGCTAAACATCTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
CDS-3UTR CAA 90 bp TATCTGGGCAGTCGAGAAGCTTCAGGAAGGACACAGGCTTACGCATTGCTTATCCTCAGAAACTGTGAGTaGTCCCTTCCTCGCTTCCAC +
Preference number: 5 (lower is better)
Translates to: YLGSREASGRTQAYALLILRNCE*SLPRFH
Trigger: GTGGAAGCGAGGAAGGGACAACTCACAGTTTCTGAG...GATAAGCAATGCGTAAGCCTGTGTCCTTCCTGAAGCTTCTCGACTGCCCAGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330889.8
CDS CCA 90 bp GGGACTCTGGCTTCGAACTTGGCCTTCACACGGAGGTTTCCATTGTaGATCATAAACTGCAAGACAACAGCAACCTCCACAATACTGTCG +
Preference number: 5 (lower is better)
Translates to: GTLASNLAFTRRFPL*IINCKTTATSTILS
Trigger: CGACAGTATTGTGGAGGTTGCTGTTGTCTTGCAGTTTATGATCCACAATGGAAACCTCCGTGTGAAGGCCAAGTTCGAAGCCAGAGTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580525.5
CDS-3UTR CAA 90 bp AAGACAGAGGAAAGGAACAACGAGTCACAGAGCAGGGGACTTGGTGCTCTGTTTATGCTGATGACAGCTTaGGGGCTTTTACCCTGTTCC +
Preference number: 5 (lower is better)
Translates to: KTEERNNESQSRGLGALFMLMTA*GLLPCS
Trigger: GGAACAGGGTAAAAGCCCCAAAGCTGTCATCAGCAT...AAACAGAGCACCAAGTCCCCTGCTCTGTGACTCGTTGTTCCTTTCCTCTGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330889.8
ENST00000585130.5
CDS TCA 90 bp GAGGCCTTCTCTTGCCAGAAGTACAAACTTCCTTCTCAGAAACTGTaGGTTGTCCCTTCCTCGCTTCCACAGGAATCCTTCTCGGTTACA +
Preference number: 5 (lower is better)
Translates to: EAFSCQKYKLPSQKL*VVPSSLPQESFSVT
Trigger: TGTAACCGAGAAGGATTCCTGTGGAAGCGAGGAAGGGACAACTCACAGTTTCTGAGAAGGAAGTTTGTACTTCTGGCAAGAGAAGGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585130.5
CDS-3UTR CAA 90 bp GGCAGACAAGTAAACTGGCCCTTAATGCACAACCCAGCAAGTGTCCTTGAAAATACTCTGGCTTCGAACTaGGCCTTCACACGGAGGTTT +
Preference number: 5 (lower is better)
Translates to: GRQVNWPLMHNPASVLENTLASN*AFTRRF
Trigger: AAACCTCCGTGTGAAGGCCAAGTTCGAAGCCAGAGT...ATTTTCAAGGACACTTGCTGGGTTGTGCATTAAGGGCCAGTTTACTTGTCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330889.8
CDS-3UTR CAA 90 bp GGGATAGATGTTCATCTATGCACCAGATCCTCAGATCCCCGAGGTGGGTTGCGGTTTCACTCTTCATTTTaGAAGAGTCTGGGTCAGATG +
Preference number: 5 (lower is better)
Translates to: GIDVHLCTRSSDPRGGLRFHSSF*KSLGQM
Trigger: CATCTGACCCAGACTCTTCAAAAATGAAGAGTGAAA...CCGCAACCCACCTCGGGGATCTGAGGATCTGGTGCATAGATGAACATCTATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000584828.5
ENST00000585130.5
CDS-3UTR CAA 90 bp ATCTCTCCTGTAGGTGATCTGCAGCCCATGGGGGTGCCCTATCTTCTCTGTCTGTTTCACTCTTCATTTTaGAAGAGTCTGGGTCAGATG +
Preference number: 5 (lower is better)
Translates to: ISPVGDLQPMGVPYLLCLFHSSF*KSLGQM
Trigger: CATCTGACCCAGACTCTTCAAAAATGAAGAGTGAAA...CAGACAGAGAAGATAGGGCACCCCCATGGGCTGCAGATCACCTACAGGAGAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585130.5
CDS-3UTR CAA 90 bp TCCTTTGTGAAGTACTTCAGGAGGCCTTCTCTTGCCAGAAGTACAAACTTCCTTCTCAGAAACTGTGAGTaGTCCCTTCCTCGCTTCCAC +
Preference number: 5 (lower is better)
Translates to: SFVKYFRRPSLARSTNFLLRNCE*SLPRFH
Trigger: GTGGAAGCGAGGAAGGGACAACTCACAGTTTCTGAG...AAGGAAGTTTGTACTTCTGGCAAGAGAAGGCCTCCTGAAGTACTTCACAAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580526.1
ENST00000585130.5
CDS-3UTR CAA 90 bp AACCCAGCAAGTGTCCTTGAAAATGCACATTTTCAAGGTGCTTCCAGAGCCAGAATGCTGATGACAGCTTaGGGGCTTTTACCCTGTTCC +
Preference number: 5 (lower is better)
Translates to: NPASVLENAHFQGASRARMLMTA*GLLPCS
Trigger: GGAACAGGGTAAAAGCCCCAAAGCTGTCATCAGCAT...TCTGGCTCTGGAAGCACCTTGAAAATGTGCATTTTCAAGGACACTTGCTGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000330889.8
CDS-3UTR CAA 90 bp AGGAGGCCTTCTCTTGCCAGAAGTACAAACTTCCTTCTCAGAAACTGTGAGTTGATGCTGATGACAGCTTaGGGGCTTTTACCCTGTTCC +
Preference number: 5 (lower is better)
Translates to: RRPSLARSTNFLLRNCELMLMTA*GLLPCS
Trigger: GGAACAGGGTAAAAGCCCCAAAGCTGTCATCAGCAT...CAACTCACAGTTTCTGAGAAGGAAGTTTGTACTTCTGGCAAGAGAAGGCCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580526.1
ENST00000585130.5
CDS GCA 90 bp TCATGGCAATCCAGGGCGAACCACCTTTTCTTGAAAGGTTCTTTCTaGTGCAAAAGAGGGAACTTCTTACCACAGATGACCAGGTCAGTT +
Preference number: 5 (lower is better)
Translates to: SWQSRANHLFLKGSF*CKRGNFLPQMTRSV
Trigger: AACTGACCTGGTCATCTGTGGTAAGAAGTTCCCTCTTTTGCAGCAGAAAGAACCTTTCAAGAAAAGGTGGTTCGCCCTGGATTGCCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000470962.1
ENST00000480980.1
CDS-3UTR CAA 90 bp GTGTATGGGGGAGGAGGGGATAGATGTTCATCTATGCACCAGATCCTCAGATCCTTTCACTCTTCATTTTaGAAGAGTCTGGGTCAGATG +
Preference number: 5 (lower is better)
Translates to: VYGGGGDRCSSMHQILRSFHSSF*KSLGQM
Trigger: CATCTGACCCAGACTCTTCAAAAATGAAGAGTGAAA...GGATCTGAGGATCTGGTGCATAGATGAACATCTATCCCCTCCTCCCCCATACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000584828.5
ENST00000585130.5
CDS-3UTR CAA 90 bp GTGAAGTACTTCAGGAGGCCTTCTCTTGCCAGAAGTACAAACTTCCTTCTCAGACTCCTTGGGTCTCCATaGAAGCAAAGAGAGAACATC +
Preference number: 5 (lower is better)
Translates to: VKYFRRPSLARSTNFLLRLLGSP*KQRENI
Trigger: GATGTTCTCTCTTTGCTTCAATGGAGACCCAAGGAG...TCTGAGAAGGAAGTTTGTACTTCTGGCAAGAGAAGGCCTCCTGAAGTACTTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585130.5
CDS-3UTR CAA 90 bp TTAGGACTTTATCTCTTGTGTCTGTTCTTTCCCACCCTTAGAATCCCAGTTGGCACACGGAGGTTTCCATaGTGGATCATAAACTCCACA +
Preference number: 5 (lower is better)
Translates to: LGLYLLCLFFPTLRIPVGTRRFP*WIINST
Trigger: TGTGGAGTTTATGATCCACAATGGAAACCTCCGTGT...GCCAACTGGGATTCTAAGGGTGGGAAAGAACAGACACAAGAGATAAAGTCCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330889.8
CDS CCA 72 bp ATGGCCGGCCCGGCGGGCTCAGCGGGGCTCAGCCCATaGCCCGTGCGCTCCGCCCGGCAGGTGGAGAGGGAC +
Preference number: 6 (lower is better)
Translates to: MAGPAGSAGLSP*PVRSARQVERD
Trigger: GTCCCTCTCCACCTGCCGGGCGGAGCGCACGGGCCATGGGCTGAGCCCCGCTGAGCCCGCCGGGCCGGCCAT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000581285.5
ENST00000581548.5
ENST00000585130.5
CDS CCA 72 bp CGGGATCCGGGGACAGGGCCTCGGCAGGCGCCCGCCTaGAAGCCCGCAGCCCAGACGCGGACGACCCACTGC +
Preference number: 6 (lower is better)
Translates to: RDPGTGPRQAPA*KPAAQTRTTHC
Trigger: GCAGTGGGTCGTCCGCGTCTGGGCTGCGGGCTTCCAGGCGGGCGCCTGCCGAGGCCCTGTCCCCGGATCCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583688.1
CDS GCA 72 bp GCCCAGTCGGGATCTGCCGCCCCGCAGTCGGCGCAGTaGGCGTTGCCTGTGTCCGGCGCCCGCAGCAGCTCC +
Preference number: 6 (lower is better)
Translates to: AQSGSAAPQSAQ*ALPVSGARSSS
Trigger: GGAGCTGCTGCGGGCGCCGGACACAGGCAACGCGCACTGCGCCGACTGCGGGGCGGCAGATCCCGACTGGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000580526.1
ENST00000581285.5
ENST00000585130.5
CDS CCA 72 bp GGAGTCGGTAGGGGCAAGAACGTTTCCCCGGTGCAGTaGAAGAAGACTGCGGGCCAGCCAGGGACTCGGGAT +
Preference number: 6 (lower is better)
Translates to: GVGRGKNVSPVQ*KKTAGQPGTRD
Trigger: ATCCCGAGTCCCTGGCTGGCCCGCAGTCTTCTTCCACTGCACCGGGGAAACGTTCTTGCCCCTACCGACTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583688.1
CDS GCA 72 bp TCTCAGGAGTCGGTAGGGGCAAGAACGTTTCCCCGGTaGAGTGGAAGAAGACTGCGGGCCAGCCAGGGACTC +
Preference number: 6 (lower is better)
Translates to: SQESVGARTFPR*SGRRLRASQGL
Trigger: GAGTCCCTGGCTGGCCCGCAGTCTTCTTCCACTGCACCGGGGAAACGTTCTTGCCCCTACCGACTCCTGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583688.1
CDS CCA 72 bp GTTTCCGCGTCTGATCCCGCTCCCGGCGCCACAGGCTaGGCCCCAACAGGAGCTCCTCAATCTAAGTGTCTA +
Preference number: 6 (lower is better)
Translates to: VSASDPAPGATG*APTGAPQSKCL
Trigger: TAGACACTTAGATTGAGGAGCTCCTGTTGGGGCCCAGCCTGTGGCGCCGGGAGCGGGATCAGACGCGGAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583688.1
CDS CCA 72 bp CCAGCCTCCTCAGTCAGACATCCTAGTGCTTCTCCCTaGGGCCTGGATAGGAGCCCTCAGGCTCTGAAGGTT +
Preference number: 6 (lower is better)
Translates to: PASSVRHPSASP*GLDRSPQALKV
Trigger: AACCTTCAGAGCCTGAGGGCTCCTATCCAGGCCCCAGGGAGAAGCACTAGGATGTCTGACTGAGGAGGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470962.1
ENST00000480980.1
CDS CCA 72 bp CCGCCGACGCGCGGGGAGGGACAGGAGCACGCAAATTaGAGTTTAACACACTGGCCTGAGATCAAATCGTGG +
Preference number: 6 (lower is better)
Translates to: PPTRGEGQEHAN*SLTHWPEIKSW
Trigger: CCACGATTTGATCTCAGGCCAGTGTGTTAAACTCCAATTTGCGTGCTCCTGTCCCTCCCCGCGCGTCGGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585130.5
CDS CCA 72 bp CAGGCAGTCGTTGGCCTGGGGGATGTAGTAGAAAGCTaGGACTCTGGCTTCGAACTTGGCCTTCACACGGAG +
Preference number: 6 (lower is better)
Translates to: QAVVGLGDVVES*DSGFELGLHTE
Trigger: CTCCGTGTGAAGGCCAAGTTCGAAGCCAGAGTCCCAGCTTTCTACTACATCCCCCAGGCCAACGACTGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000581285.5
ENST00000585130.5
CDS CCA 72 bp ACAGATTTAACTCTGCTGATGTCAGGGAAGTTACGGTaGACGCCGCAGCAGTTGAGACAGATGAAGATCCCC +
Preference number: 6 (lower is better)
Translates to: TDLTLLMSGKLR*TPQQLRQMKIP
Trigger: GGGGATCTTCATCTGTCTCAACTGCTGCGGCGTCCACCGTAACTTCCCTGACATCAGCAGAGTTAAATCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330889.8
ENST00000580525.5
ENST00000580526.1
ENST00000581285.5
ENST00000585130.5
CDS CAA 90 bp GCTGGGACTCTGGCTTCGAACTTGGCCTTCACACGGAGGTTTCCATaGTGGATCATAAACTGCAAGACAACAGCAACCTCCACAATACTG +
Preference number: 6 (lower is better)
Translates to: AGTLASNLAFTRRFP*WIINCKTTATSTIL
Trigger: CAGTATTGTGGAGGTTGCTGTTGTCTTGCAGTTTATGATCCACAATGGAAACCTCCGTGTGAAGGCCAAGTTCGAAGCCAGAGTCCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580525.5
CDS TCA 72 bp CTTTCTGCTGCAAAAGAGGGAACTTCTTACCACAGATaGCCAGGTCAGTTTCTGAGGATAGAGGTCAGGGGC +
Preference number: 6 (lower is better)
Translates to: LSAAKEGTSYHR*PGQFLRIEVRG
Trigger: GCCCCTGACCTCTATCCTCAGAAACTGACCTGGTCATCTGTGGTAAGAAGTTCCCTCTTTTGCAGCAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000470962.1
ENST00000480980.1
CDS CCA 72 bp CAAATCGTGGCCTGTCACTTGGTAGCTACGAGACTGTaGACAACCTATTCAACCTCTGTGGGTCTCAGTTTC +
Preference number: 6 (lower is better)
Translates to: QIVACHLVATRL*TTYSTSVGLSF
Trigger: GAAACTGAGACCCACAGAGGTTGAATAGGTTGTCCACAGTCTCGTAGCTACCAAGTGACAGGCCACGATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585130.5
CDS CAA 72 bp CTGGCTTCGAACTTGGCCTTCACACGGAGGTTTCCATaGTGGATCATAAACTCCACAATACTGTCGTCCCAG +
Preference number: 6 (lower is better)
Translates to: LASNLAFTRRFP*WIINSTILSSQ
Trigger: CTGGGACGACAGTATTGTGGAGTTTATGATCCACAATGGAAACCTCCGTGTGAAGGCCAAGTTCGAAGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330889.8
ENST00000581285.5
ENST00000585130.5
CDS CAA 72 bp CTGGCTTCGAACTTGGCCTTCACACGGAGGTTTCCATaGTGGATCATAAACTGCAAGACAACAGCAACCTCC +
Preference number: 6 (lower is better)
Translates to: LASNLAFTRRFP*WIINCKTTATS
Trigger: GGAGGTTGCTGTTGTCTTGCAGTTTATGATCCACAATGGAAACCTCCGTGTGAAGGCCAAGTTCGAAGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580525.5
CDS CAA 90 bp CCTTCTCTTGCCAGAAGTACAAACTTCCTTCTCAGAAACTGTGAGTaGTCCCTTCCTCGCTTCCACAGGAATCCTTCTCGGTTACAGGCA +
Preference number: 6 (lower is better)
Translates to: PSLARSTNFLLRNCE*SLPRFHRNPSRLQA
Trigger: TGCCTGTAACCGAGAAGGATTCCTGTGGAAGCGAGGAAGGGACAACTCACAGTTTCTGAGAAGGAAGTTTGTACTTCTGGCAAGAGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585130.5
CDS GCA 72 bp GCCTTCACACGGAGGTTTCCATTGTGGATCATAAACTaGAAGACAACAGCAACCTCCACAATACTGTCGTCC +
Preference number: 6 (lower is better)
Translates to: AFTRRFPLWIIN*KTTATSTILSS
Trigger: GGACGACAGTATTGTGGAGGTTGCTGTTGTCTTGCAGTTTATGATCCACAATGGAAACCTCCGTGTGAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580525.5
CDS CCA 72 bp GCTTCGAACTTGGCCTTCACACGGAGGTTTCCATTGTaGATCATAAACTGCAAGACAACAGCAACCTCCACA +
Preference number: 6 (lower is better)
Translates to: ASNLAFTRRFPL*IINCKTTATST
Trigger: TGTGGAGGTTGCTGTTGTCTTGCAGTTTATGATCCACAATGGAAACCTCCGTGTGAAGGCCAAGTTCGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580525.5