RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADAMTSL2 (Homo sapiens)

Ensembl gene IDs: ENSG00000197859

Ensembl transcript IDs: ENST00000354484.8, ENST00000393060.1, ENST00000393061.7, ENST00000651351.2

Found 811 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGCGCCTCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATaGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCT +
Preference number: 1 (lower is better)
Translates to: SASARGRKCGGKRAP*EGLHKREHAWASLA
Trigger: AGCCAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGAGGCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
3UTR-3UTR CCA 90 bp GGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCTGCCTGAGCCCAGACACCTCCACCGCTaGCTGTGGGCCCTGGGCCCC +
Preference number: 2 (lower is better)
Translates to: GRGSIRGSTPGPPWLPEPRHLHR*LWALGP
Trigger: GGGGCCCAGGGCCCACAGCCAGCGGTGGAGGTGTCT...GGGCTCAGGCAGCCAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
3UTR-3UTR CCA 90 bp GGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGCTGGCTGTGGGCCCTGCCCAGGAGGGGCGCTTaGTCTTCATCTGGAAGGGGC +
Preference number: 2 (lower is better)
Translates to: GVGYGPGARHLHRWLWALPRRGA*SSSGRG
Trigger: GCCCCTTCCAGATGAAGACCAAGCGCCCCTCCTGGG...CAGGGCCCACAGCCAGCGGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
3UTR-3UTR CCA 90 bp AGCGCCTCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGAGACACCTCCACCGCTaGCTGTGGGCCCTGGGCCCC +
Preference number: 2 (lower is better)
Translates to: SASARGRKCGGKRAPWEGRHLHR*LWALGP
Trigger: GGGGCCCAGGGCCCACAGCCAGCGGTGGAGGTGTCT...CCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGAGGCGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
3UTR-3UTR CCA 90 bp GGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCTGCCTGAGCCCCACCCAGAGAGGGCGTaGGCTACGGGCCCGGAGCAA +
Preference number: 2 (lower is better)
Translates to: GRGSIRGSTPGPPWLPEPHPERA*ATGPEQ
Trigger: TTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTG...GGGCTCAGGCAGCCAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
3UTR-3UTR CCA 90 bp GGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGCTGGCTGTGGGCCCTGCGCTTGGTCTTCATCTaGAAGGGGCTGCAGCTGCCG +
Preference number: 2 (lower is better)
Translates to: GVGYGPGARHLHRWLWALRLVFI*KGLQLP
Trigger: CGGCAGCTGCAGCCCCTTCCAGATGAAGACCAAGCG...CAGGGCCCACAGCCAGCGGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
3UTR-3UTR GCA 90 bp TGGGCAAGCGCCTCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGCTGGGCCTCCTTGGCTaGCTGAGCCCCTCTCACCCC +
Preference number: 2 (lower is better)
Translates to: WASASARGRKCGGKRAPWLGLLG*LSPSHP
Trigger: GGGGTGAGAGGGGCTCAGGCAGCCAAGGAGGCCCAG...CCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGAGGCGCTTGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
3UTR-3UTR CCA 90 bp CCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCCGCTTGGTCTTCATCTaGAAGGGGCTGCAGCTGCCG +
Preference number: 2 (lower is better)
Translates to: PCHPERAWATGPEQDTSTRLVFI*KGLQLP
Trigger: CGGCAGCTGCAGCCCCTTCCAGATGAAGACCAAGCG...GGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
3UTR-3UTR CCA 90 bp GGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCCACCCAGAGAGGGCGTaGGCTACGGGCCCGGAGCAA +
Preference number: 2 (lower is better)
Translates to: GKRAPWEGLHKREHAWASHPERA*ATGPEQ
Trigger: TTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTG...GGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
3UTR-3UTR CCA 90 bp GCCGGAGGCTCTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCGCTTGGTCTTCATCTaGAAGGGGCTGCAGCTGCCG +
Preference number: 2 (lower is better)
Translates to: AGGSAPGAQRSTGRGKSPRLVFI*KGLQLP
Trigger: CGGCAGCTGCAGCCCCTTCCAGATGAAGACCAAGCG...AGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAGAGCCTCCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
3UTR-3UTR GCA 90 bp GGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTCCTTCAGAAGGCCCTaGCACCCAGAGAGGGCGTGG +
Preference number: 2 (lower is better)
Translates to: GKRAPWEGLHKREHAWASSFRRP*HPERAW
Trigger: CCACGCCCTCTCTGGGTGGCAGGGCCTTCTGAAGGA...GGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
3UTR-3UTR GCA 90 bp GCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTTCCTTCAGAAGGCCCTaGCACCCAGAGAGGGCGTGG +
Preference number: 2 (lower is better)
Translates to: AGRELHGRGSIRGSTPGPSFRRP*HPERAW
Trigger: CCACGCCCTCTCTGGGTGGCAGGGCCTTCTGAAGGA...AGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
3UTR-3UTR CCA 90 bp CGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGCACCCAGAGAGGGCGTaGGCTACGGGCCCGGAGCAA +
Preference number: 2 (lower is better)
Translates to: RGRKCGGKRAPWEGLHKRHPERA*ATGPEQ
Trigger: TTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTG...CCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
3UTR-3UTR GCA 90 bp AAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGGGTGCCGGAGGCTCTaGCCCAGGAGCACAAAGGTC +
Preference number: 2 (lower is better)
Translates to: KRAPWEGLHKREHAWASLGCRRL*PRSTKV
Trigger: GACCTTTGTGCTCCTGGGGCAGAGCCTCCGGCACCC...CAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
3UTR-3UTR CCA 90 bp TGGGCAAGCGCCTCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGCGCTTGGTCTTCATCTaGAAGGGGCTGCAGCTGCCG +
Preference number: 2 (lower is better)
Translates to: WASASARGRKCGGKRAPWRLVFI*KGLQLP
Trigger: CGGCAGCTGCAGCCCCTTCCAGATGAAGACCAAGCG...CCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGAGGCGCTTGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
3UTR-3UTR GCA 90 bp GCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCACGTTGGGCTCGCCTaGAAGTTTCCTTCAGAAGGC +
Preference number: 2 (lower is better)
Translates to: AGRELHGRGSIRGSTPGPHVGLA*KFPSEG
Trigger: GCCTTCTGAAGGAAACTTGCAGGCGAGCCCAACGTG...AGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
3UTR-3UTR CAA 90 bp GCCGGAGGCTCTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCCCCAGGAGGGGCGCTaGGTCTTCATCTGGAAGGGG +
Preference number: 3 (lower is better)
Translates to: AGGSAPGAQRSTGRGKSPPQEGR*VFIWKG
Trigger: CCCCTTCCAGATGAAGACCAAGCGCCCCTCCTGGGG...AGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAGAGCCTCCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
3UTR-3UTR CAA 90 bp GGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCTGCCTGAGCCCCCCCAGGAGGGGCGCTaGGTCTTCATCTGGAAGGGG +
Preference number: 3 (lower is better)
Translates to: GRGSIRGSTPGPPWLPEPPQEGR*VFIWKG
Trigger: CCCCTTCCAGATGAAGACCAAGCGCCCCTCCTGGGG...GGGCTCAGGCAGCCAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCC
69% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
3UTR GCA 72 bp GTCCCGTGGGCAAGCGCCTCTGCCCGGGGTAGAAAGTaGGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCAT +
Preference number: 3 (lower is better)
Translates to: VPWASASARGRK*GGKRAPWEGLH
Trigger: ATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGAGGCGCTTGCCCACGGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
3UTR CCA 72 bp GCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATaGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCC +
Preference number: 3 (lower is better)
Translates to: ARGRKCGGKRAP*EGLHKREHAWA
Trigger: GGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
3UTR-3UTR CAA 90 bp TGGGCAAGCGCCTCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGCCCCAGGAGGGGCGCTaGGTCTTCATCTGGAAGGGG +
Preference number: 3 (lower is better)
Translates to: WASASARGRKCGGKRAPWPQEGR*VFIWKG
Trigger: CCCCTTCCAGATGAAGACCAAGCGCCCCTCCTGGGG...CCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGAGGCGCTTGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
3UTR-3UTR CAA 90 bp CACAAACACAGGATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCCCCCAGGAGGGGCGCTaGGTCTTCATCTGGAAGGGG +
Preference number: 3 (lower is better)
Translates to: HKHRIHAGTRTGSHGRGGPQEGR*VFIWKG
Trigger: CCCCTTCCAGATGAAGACCAAGCGCCCCTCCTGGGG...GCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATCCTGTGTTTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp AGGGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGCTGGCTGTGGGCCCCGCGGGCGGGGACCATaGGCTGCCGCTGGCCGTCCA +
Preference number: 4 (lower is better)
Translates to: RAWATGPEQDTSTAGCGPRGRGP*AAAGRP
Trigger: TGGACGGCCAGCGGCAGCTCATGGTCCCCGCCCGCG...GGGCCCACAGCCAGCGGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp CCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGCACCAGCCGCTTCTTaGCCCCGCGCCCGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: PCHPERAWATGPEQDTSTAPAAS*PRARRW
Trigger: CCACCTGCGGGCGCGGGGTCAAGAAGCGGCTGGTGC...GGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGCTGGCTGTGGGCCCTGGGGCCACTGCGCGTCTaGGGCTTCCCGTTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GVGYGPGARHLHRWLWALGPLRV*GFPLAS
Trigger: GCTGGCCAACGGGAAGCCGCAGACGCGCAGTGGCCC...CAGGGCCCACAGCCAGCGGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp CCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCCAGGCCCAGCCGCTCTaGGGAGGCCTGGCCGTAGAG +
Preference number: 4 (lower is better)
Translates to: PCHPERAWATGPEQDTSTQAQPL*GGLAVE
Trigger: CTCTACGGCCAGGCCTCCTCAGAGCGGCTGGGCCTG...GGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GCCGGAGGCTCTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTGCCCCGCCGCCGGCCTaGTCGCACACCTCGTTGGTC +
Preference number: 4 (lower is better)
Translates to: AGGSAPGAQRSTGRGKSPAPPPA*SHTSLV
Trigger: GACCAACGAGGTGTGCGAGCAGGCCGGCGGCGGGGC...AGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAGAGCCTCCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGCTGGCTGTGGGCCCTGGCGGGACTCACGCCTTaGTTGCGCGCCTTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: GVGYGPGARHLHRWLWALAGLTP*LRALGL
Trigger: CAGGCCCAAGGCGCGCAAGCAAGGCGTGAGTCCCGC...CAGGGCCCACAGCCAGCGGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGCTGGCTGTGGGCCCTGCCGCACGGCCTCGGCTaGCTCGCACAGGTCGCTGTA +
Preference number: 4 (lower is better)
Translates to: GVGYGPGARHLHRWLWALPHGLG*LAQVAV
Trigger: TACAGCGACCTGTGCGAGGCAGCCGAGGCCGTGCGG...CAGGGCCCACAGCCAGCGGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp AGGGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGCTGGCTGTGGGCCCCTGGGCCTCCTTGGCTaGCTGAGCCCCTCTCACCCC +
Preference number: 4 (lower is better)
Translates to: RAWATGPEQDTSTAGCGPLGLLG*LSPSHP
Trigger: GGGGTGAGAGGGGCTCAGGCAGCCAAGGAGGCCCAG...GGGCCCACAGCCAGCGGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGCTGGCTGTGGGCCCTGCTGGGCCTCCTTGGCTaGCTGAGCCCCTCTCACCCC +
Preference number: 4 (lower is better)
Translates to: GVGYGPGARHLHRWLWALLGLLG*LSPSHP
Trigger: GGGGTGAGAGGGGCTCAGGCAGCCAAGGAGGCCCAG...CAGGGCCCACAGCCAGCGGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp AGGGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGCTGGCTGTGGGCCCAGCACTGACGCTGACTaGAGGGGCGGGGGCCGAGGT +
Preference number: 4 (lower is better)
Translates to: RAWATGPEQDTSTAGCGPSTDAD*RGGGRG
Trigger: ACCTCGGCCCCCGCCCCTGCAGTCAGCGTCAGTGCT...GGGCCCACAGCCAGCGGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp AGGGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGCTGGCTGTGGGCCCAGGGGTGGCTCTGTCTaGGGGAGGCCACTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: RAWATGPEQDTSTAGCGPRGGSV*GRPLGA
Trigger: GGCACCCAGTGGCCTCCCCCAGACAGAGCCACCCCT...GGGCCCACAGCCAGCGGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGCTGGCTGTGGGCCCTGAGGGGTGGCTCTGTCTaGGGGAGGCCACTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: GVGYGPGARHLHRWLWALRGGSV*GRPLGA
Trigger: GGCACCCAGTGGCCTCCCCCAGACAGAGCCACCCCT...CAGGGCCCACAGCCAGCGGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp AGGGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGCTGGCTGTGGGCCCTCCCCAAACGTCCCGTaGGCAAGCGCCTCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: RAWATGPEQDTSTAGCGPSPNVP*ASASAR
Trigger: CCGGGCAGAGGCGCTTGCCCACGGGACGTTTGGGGA...GGGCCCACAGCCAGCGGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp CATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCTGCCTGAGCGCGGGCGGGGACCATaGGCTGCCGCTGGCCGTCCA +
Preference number: 4 (lower is better)
Translates to: HGRGSIRGSTPGPPWLPERGRGP*AAAGRP
Trigger: TGGACGGCCAGCGGCAGCTCATGGTCCCCGCCCGCG...CTCAGGCAGCCAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp GGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCGCGGGCGGGGACCATaGGCTGCCGCTGGCCGTCCA +
Preference number: 4 (lower is better)
Translates to: GRGKSPLDSRGSVPRLLGRGRGP*AAAGRP
Trigger: TGGACGGCCAGCGGCAGCTCATGGTCCCCGCCCGCG...GCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp AGGGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGCTGGCTGTGGGCCCTGCAGTACACGTGCCTaGTGGTGCGGCCTTGCCCGC +
Preference number: 4 (lower is better)
Translates to: RAWATGPEQDTSTAGCGPCSTRA*WCGLAR
Trigger: GCGGGCAAGGCCGCACCATCAGGCACGTGTACTGCA...GGGCCCACAGCCAGCGGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp GTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGCGTGCCCCGCACCAGCCGCTTCTTaGCCCCGCGCCCGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: VPSRQPRLSATSLRPACPAPAAS*PRARRW
Trigger: CCACCTGCGGGCGCGGGGTCAAGAAGCGGCTGGTGC...GGGGCACGCTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp CACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTGTCTGGGGGAGGGCACCAGCCGCTTCTTaGCCCCGCGCCCGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: HAGTRTGSHGRGGSVWGRAPAAS*PRARRW
Trigger: CCACCTGCGGGCGCGGGGTCAAGAAGCGGCTGGTGC...CCTCCCCCAGACAGAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CAGAAGGCCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACACGCGGGGACCATGAGCTaGCGCTGGCCGTCCACGGTG +
Preference number: 4 (lower is better)
Translates to: QKALPPREGVGYGPGARHAGTMS*RWPSTV
Trigger: CACCGTGGACGGCCAGCGGCAGCTCATGGTCCCCGC...GTGTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGGCCTTCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp AGCGCCTCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGGCCCCGCCGCCGGCCTaGTCGCACACCTCGTTGGTC +
Preference number: 4 (lower is better)
Translates to: SASARGRKCGGKRAPWEGAPPPA*SHTSLV
Trigger: GACCAACGAGGTGTGCGAGCAGGCCGGCGGCGGGGC...CCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGAGGCGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp AGGGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGCTGGCTGTGGGCCCGACTCACGCCTTGCTTaGGCGCCTTGGGCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: RAWATGPEQDTSTAGCGPDSRLA*APWAWS
Trigger: GGACCAGGCCCAAGGCGCGCAAGCAAGGCGTGAGTC...GGGCCCACAGCCAGCGGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCCGCCTGTCCGGCTTCTaGCTCCAGAGCGGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: PCHPERAWATGPEQDTSTRLSGF*LQSGPC
Trigger: ACAGGGCCCGCTCTGGAGGCAGAAGCCGGACAGGCG...GGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393061.7
CDS-3UTR GCA 90 bp GGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCTGCCTGAGCCCGCCCAGTGGCGGCTCTaGGCCGGCGGCCGCCTTTAT +
Preference number: 4 (lower is better)
Translates to: GRGSIRGSTPGPPWLPEPAQWRL*AGGRLY
Trigger: ATAAAGGCGGCCGCCGGCGCAGAGCCGCCACTGGGC...GGGCTCAGGCAGCCAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393061.7
CDS-3UTR CCA 90 bp AGGGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGCTGGCTGTGGGCCCTGCTCGTCTCCCACCTaGGCTGGCACTCCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: RAWATGPEQDTSTAGCGPCSSPT*AGTPSQ
Trigger: CTGGGAGGGAGTGCCAGCCCAGGTGGGAGACGAGCA...GGGCCCACAGCCAGCGGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCTCCGACATCTCCCACTaGGGCCCGCAGGCGGGGTTC +
Preference number: 4 (lower is better)
Translates to: PCHPERAWATGPEQDTSTSDISH*GPQAGF
Trigger: GAACCCCGCCTGCGGGCCCCAGTGGGAGATGTCGGA...GGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCCTGGCAGCTGTCATCTaGGGGCTCCGTGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: PCHPERAWATGPEQDTSTLAAVI*GLRGAG
Trigger: CCCTGCCCCACGGAGCCCCCAGATGACAGCTGCCAG...GGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp AGGGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGCTGGCTGTGGGCCCGTGCCTGGCTGGTCCTaGCAGCTGTCATCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: RAWATGPEQDTSTAGCGPVPGWS*QLSSGG
Trigger: GCCCCCAGATGACAGCTGCCAGGACCAGCCAGGCAC...GGGCCCACAGCCAGCGGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGCTGGCTGTGGGCCCTGTGGCCAGGGCACAGTTaGTGCCTGGCTGGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: GVGYGPGARHLHRWLWALWPGHS*CLAGPG
Trigger: GCCAGGACCAGCCAGGCACCAACTGTGCCCTGGCCA...CAGGGCCCACAGCCAGCGGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CAGAAGGCCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACACAGACACCTCCACCGCTaGCTGTGGGCCCTGGGCCCC +
Preference number: 4 (lower is better)
Translates to: QKALPPREGVGYGPGARHRHLHR*LWALGP
Trigger: GGGGCCCAGGGCCCACAGCCAGCGGTGGAGGTGTCT...GTGTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGGCCTTCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp AGGGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGCTGGCTGTGGGCCCCCCCTCGCAGGTCAGTaGGCTTGCAGGATGTGCCGT +
Preference number: 4 (lower is better)
Translates to: RAWATGPEQDTSTAGCGPPLAGQ*ACRMCR
Trigger: ACGGCACATCCTGCAAGCTCACTGACCTGCGAGGGG...GGGCCCACAGCCAGCGGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCCCT
70% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp CACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTGCACCAGCCGCTTCTTaGCCCCGCGCCCGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: HGPWEVPSRQPRLSATSLAPAAS*PRARRW
Trigger: CCACCTGCGGGCGCGGGGTCAAGAAGCGGCTGGTGC...AAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CAGAAGGCCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACACAGGCCGTGGCGTCGGTaGCCCCCTCCAGGCTATTGG +
Preference number: 4 (lower is better)
Translates to: QKALPPREGVGYGPGARHRPWRR*PPPGYW
Trigger: CCAATAGCCTGGAGGGGGGCACCGACGCCACGGCCT...GTGTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGGCCTTCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp AGGGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGCTGGCTGTGGGCCCACGGACTTCCTCCTCTaGTGCAGGCAGTGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: RAWATGPEQDTSTAGCGPTDFLL*CRQCRS
Trigger: GGAGCGGCACTGCCTGCAGCAGAGGAGGAAGTCCGT...GGGCCCACAGCCAGCGGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CAGAAGGCCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACACGCTTGGACGTGCCCGTaGAGGTCCTGTTCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: QKALPPREGVGYGPGARHAWTCP*RSCSRG
Trigger: GCCCCGGGAACAGGACCTGCACGGGCACGTCCAAGC...GTGTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGGCCTTCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGCGTGCCCCGCAGGCGGGGACCATGAGCTaGCGCTGGCCGTCCACGGTG +
Preference number: 4 (lower is better)
Translates to: PLDSRGSVPRLLGQRAPQAGTMS*RWPSTV
Trigger: CACCGTGGACGGCCAGCGGCAGCTCATGGTCCCCGC...CTGCGGGGCACGCTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCTGCCTGAGGCCCCGCCGCCGGCCTaGTCGCACACCTCGTTGGTC +
Preference number: 4 (lower is better)
Translates to: HGRGSIRGSTPGPPWLPEAPPPA*SHTSLV
Trigger: GACCAACGAGGTGTGCGAGCAGGCCGGCGGCGGGGC...CTCAGGCAGCCAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CAGAAGGCCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACACGCGGGACTCACGCCTTaGTTGCGCGCCTTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: QKALPPREGVGYGPGARHAGLTP*LRALGL
Trigger: CAGGCCCAAGGCGCGCAAGCAAGGCGTGAGTCCCGC...GTGTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGGCCTTCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp AGGGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGCTGGCTGTGGGCCCCACAGGGCGGGCCCGTaGAGTTCTTCTCCCCTACAG +
Preference number: 4 (lower is better)
Translates to: RAWATGPEQDTSTAGCGPHRAGP*SSSPLQ
Trigger: CTGTAGGGGAGAAGAACTGCACGGGCCCGCCCTGTG...GGGCCCACAGCCAGCGGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp AGGGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGCTGGCTGTGGGCCCAGCGGCAGCACGCCTTaGTGTAGTACCAGTGCCCGC +
Preference number: 4 (lower is better)
Translates to: RAWATGPEQDTSTAGCGPSGSTP*CSTSAR
Trigger: GCGGGCACTGGTACTACAGCAAGGCGTGCTGCCGCT...GGGCCCACAGCCAGCGGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTGTCTGGGGCCAGGCCGGCCCAGCTaGCTGTTGGCTGCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: DPRRNTDRFPRQGWLCLGPGRPS*LLAAAG
Trigger: GCCGGCAGCAGCCAACAGGCAGCTGGGCCGGCCTGG...CCCCAGACAGAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393061.7
CDS-3UTR GCA 90 bp CCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGCGTGCCCCGCAGCGTGAGTGCAGAGGCTaGGGCCCGGCCTCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: PLDSRGSVPRLLGQRAPQRECRG*GPASLS
Trigger: GGAGAGGGAGGCCGGGCCGCAGCCTCTGCACTCACG...CTGCGGGGCACGCTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGCTGGCTGTGGGCCCTGGCTGGCCGTCCACGGTaGTACAGTGCAGGTCACACG +
Preference number: 4 (lower is better)
Translates to: GVGYGPGARHLHRWLWALAGRPR*YSAGHT
Trigger: CGTGTGACCTGCACTGTACCACCGTGGACGGCCAGC...CAGGGCCCACAGCCAGCGGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp AGGGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGCTGGCTGTGGGCCCACCATGAGCTGCCGCTaGCCGTCCACGGTGGTACAG +
Preference number: 4 (lower is better)
Translates to: RAWATGPEQDTSTAGCGPTMSCR*PSTVVQ
Trigger: CTGTACCACCGTGGACGGCCAGCGGCAGCTCATGGT...GGGCCCACAGCCAGCGGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGCTGGCTGTGGGCCCTGTCAGGCCCTGGTTGGTaGGCCCCTGTGCCACGATGT +
Preference number: 4 (lower is better)
Translates to: GVGYGPGARHLHRWLWALSGPGW*APVPRC
Trigger: ACATCGTGGCACAGGGGCCCACCAACCAGGGCCTGA...CAGGGCCCACAGCCAGCGGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGCTGGCTGTGGGCCCTGCATTCAGGCCCTGGTTaGTGGGCCCCTGTGCCACGA +
Preference number: 4 (lower is better)
Translates to: GVGYGPGARHLHRWLWALHSGPG*WAPVPR
Trigger: TCGTGGCACAGGGGCCCACCAACCAGGGCCTGAATG...CAGGGCCCACAGCCAGCGGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGCTGGCTGTGGGCCCTGCCTGCGCCCAGCAGCTaGTCAGAGATGGCGTTAGCC +
Preference number: 4 (lower is better)
Translates to: GVGYGPGARHLHRWLWALPAPSS*SEMALA
Trigger: GGCTAACGCCATCTCTGACCAGCTGCTGGGCGCAGG...CAGGGCCCACAGCCAGCGGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCTGCCTGAGCCCCCCCTGTGGTGCAGGTaGCACTGCAGGGCTCGTGGG +
Preference number: 4 (lower is better)
Translates to: GRGSIRGSTPGPPWLPEPPLWCR*HCRARG
Trigger: CCCACGAGCCCTGCAGTGCCACCTGCACCACAGGGG...GGGCTCAGGCAGCCAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCC
70% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp AGCGCCTCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCCCCGCGCCCGCAGGTaGTGTTGCACCGCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: SASARGRKCGGKRAPWEGPRARR*CCTAPS
Trigger: ACTGGGAGCGGTGCAACACCACCTGCGGGCGCGGGG...CCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGAGGCGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTGTCTGGGGGAGGAGACACCTCCACCGCTaGCTGTGGGCCCTGGGCCCC +
Preference number: 4 (lower is better)
Translates to: HAGTRTGSHGRGGSVWGRRHLHR*LWALGP
Trigger: GGGGCCCAGGGCCCACAGCCAGCGGTGGAGGTGTCT...CCTCCCCCAGACAGAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGCCAGACACCTCCACCGCTaGCTGTGGGCCCTGGGCCCC +
Preference number: 4 (lower is better)
Translates to: LPQEHKGPRAVGSPLSTARHLHR*LWALGP
Trigger: GGGGCCCAGGGCCCACAGCCAGCGGTGGAGGTGTCT...GGCTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGCGTGCCCCGCAGAGACACCTCCACCGCTaGCTGTGGGCCCTGGGCCCC +
Preference number: 4 (lower is better)
Translates to: PLDSRGSVPRLLGQRAPQRHLHR*LWALGP
Trigger: GGGGCCCAGGGCCCACAGCCAGCGGTGGAGGTGTCT...CTGCGGGGCACGCTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp CACAAACACAGGATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCCGCGGGCGGGGACCATaGGCTGCCGCTGGCCGTCCA +
Preference number: 4 (lower is better)
Translates to: HKHRIHAGTRTGSHGRGGRGRGP*AAAGRP
Trigger: TGGACGGCCAGCGGCAGCTCATGGTCCCCGCCCGCG...GCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATCCTGTGTTTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp GCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCAGGCCCAGCCGCTCTaGGGAGGCCTGGCCGTAGAG +
Preference number: 4 (lower is better)
Translates to: AGRELHGRGSIRGSTPGPQAQPL*GGLAVE
Trigger: CTCTACGGCCAGGCCTCCTCAGAGCGGCTGGGCCTG...AGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp GCCGGAGGCTCTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTGGTCCTGGCCTTGTaGGTCCTGTTCCCGGCCGAG +
Preference number: 4 (lower is better)
Translates to: AGGSAPGAQRSTGRGKSPLVLAL*VLFPAE
Trigger: CTCGGCCGGGAACAGGACTCACAAGGCCAGGACCAG...AGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAGAGCCTCCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp CAGAAGGCCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACACTGCAGTACACGTGCCTaGTGGTGCGGCCTTGCCCGC +
Preference number: 4 (lower is better)
Translates to: QKALPPREGVGYGPGARHCSTRA*WCGLAR
Trigger: GCGGGCAAGGCCGCACCATCAGGCACGTGTACTGCA...GTGTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGGCCTTCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp CTCTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGGAGCAGCCGCTGGCCTaGGGTTACCGGGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: LCPRSTKVHGPWEVPSRQEQPLA*GYRGGW
Trigger: CCAGCCTCCCCGGTAACCTCAGGCCAGCGGCTGCTC...CTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393061.7
CDS-3UTR GCA 90 bp AGCGCCTCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGGCTTGGACGTGCCCGTaGAGGTCCTGTTCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: SASARGRKCGGKRAPWEGAWTCP*RSCSRG
Trigger: GCCCCGGGAACAGGACCTGCACGGGCACGTCCAAGC...CCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGAGGCGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCTGCCTGAGGCGGGGACCATGAGCTaGCGCTGGCCGTCCACGGTG +
Preference number: 4 (lower is better)
Translates to: HGRGSIRGSTPGPPWLPEAGTMS*RWPSTV
Trigger: CACCGTGGACGGCCAGCGGCAGCTCATGGTCCCCGC...CTCAGGCAGCCAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CAGAAGGCCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACACTGCCCGTCACGTGGGTaGAGCTGCTACCGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: QKALPPREGVGYGPGARHCPSRG*SCYRPP
Trigger: AGGGGGACGGTAGCAGCTGCACCCACGTGACGGGCA...GTGTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGGCCTTCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp AGGGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGCTGGCTGTGGGCCCCTCTCGTGTGGCGGCTaGAGCAGCGTGTACTCGAAG +
Preference number: 4 (lower is better)
Translates to: RAWATGPEQDTSTAGCGPLSCGG*SSVYSK
Trigger: CTTCGAGTACACGCTGCTGCAGCCGCCACACGAGAG...GGGCCCACAGCCAGCGGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGGCCCCGCCGCCGGCCTaGTCGCACACCTCGTTGGTC +
Preference number: 4 (lower is better)
Translates to: RGKSPLDSRGSVPRLLGQAPPPA*SHTSLV
Trigger: GACCAACGAGGTGTGCGAGCAGGCCGGCGGCGGGGC...CTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTGTCTGGGGGAGGGCGGGACTCACGCCTTaGTTGCGCGCCTTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: HAGTRTGSHGRGGSVWGRAGLTP*LRALGL
Trigger: CAGGCCCAAGGCGCGCAAGCAAGGCGTGAGTCCCGC...CCTCCCCCAGACAGAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGGTTCCGGCAGGTCTTaGGTTCCTCGGGCCGCACGG +
Preference number: 4 (lower is better)
Translates to: LPQEHKGPRAVGSPLSTAGSGRS*VPRAAR
Trigger: CCGTGCGGCCCGAGGAACGCAAGACCTGCCGGAACC...GGCTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTGTCTGGGGGAGGGGTTCCGGCAGGTCTTaGGTTCCTCGGGCCGCACGG +
Preference number: 4 (lower is better)
Translates to: HAGTRTGSHGRGGSVWGRGSGRS*VPRAAR
Trigger: CCGTGCGGCCCGAGGAACGCAAGACCTGCCGGAACC...CCTCCCCCAGACAGAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGCGTGCCCCGCAGGGTTCCGGCAGGTCTTaGGTTCCTCGGGCCGCACGG +
Preference number: 4 (lower is better)
Translates to: PLDSRGSVPRLLGQRAPQGSGRS*VPRAAR
Trigger: CCGTGCGGCCCGAGGAACGCAAGACCTGCCGGAACC...CTGCGGGGCACGCTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCGGGCCACTGCGCGTCTaGGGCTTCCCGTTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GKRAPWEGLHKREHAWASGPLRV*GFPLAS
Trigger: GCTGGCCAACGGGAAGCCGCAGACGCGCAGTGGCCC...GGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTGGGCCACTGCGCGTCTaGGGCTTCCCGTTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: HGPWEVPSRQPRLSATSLGPLRV*GFPLAS
Trigger: GCTGGCCAACGGGAAGCCGCAGACGCGCAGTGGCCC...AAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp TGGGCAAGCGCCTCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGCGCACTCGGGGCCACTaGGCGTCTGCGGCTTCCCGT +
Preference number: 4 (lower is better)
Translates to: WASASARGRKCGGKRAPWRTRGH*ASAASR
Trigger: ACGGGAAGCCGCAGACGCGCAGTGGCCCCGAGTGCG...CCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGAGGCGCTTGCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp TTCAGAAGGCCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACCTGGGCCTCCTTGGCTaGCTGAGCCCCTCTCACCCC +
Preference number: 4 (lower is better)
Translates to: FRRPCHPERAWATGPEQDLGLLG*LSPSHP
Trigger: GGGGTGAGAGGGGCTCAGGCAGCCAAGGAGGCCCAG...GTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGGCCTTCTGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp TTCAGAAGGCCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACAGCACTGACGCTGACTaGAGGGGCGGGGGCCGAGGT +
Preference number: 4 (lower is better)
Translates to: FRRPCHPERAWATGPEQDSTDAD*RGGGRG
Trigger: ACCTCGGCCCCCGCCCCTGCAGTCAGCGTCAGTGCT...GTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGGCCTTCTGAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGCCAGCACTGACGCTGACTaGAGGGGCGGGGGCCGAGGT +
Preference number: 4 (lower is better)
Translates to: LPQEHKGPRAVGSPLSTASTDAD*RGGGRG
Trigger: ACCTCGGCCCCCGCCCCTGCAGTCAGCGTCAGTGCT...GGCTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTGTCTGGGGGAGGAGGCAGTGCCGCTCCTaGGATGTCACCCCACCCCCG +
Preference number: 4 (lower is better)
Translates to: HAGTRTGSHGRGGSVWGRRQCRS*DVTPPP
Trigger: CGGGGGTGGGGTGACATCCCAGGAGCGGCACTGCCT...CCTCCCCCAGACAGAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCACCATGAGCTGCCGCTaGCCGTCCACGGTGGTACAG +
Preference number: 4 (lower is better)
Translates to: PCHPERAWATGPEQDTSTTMSCR*PSTVVQ
Trigger: CTGTACCACCGTGGACGGCCAGCGGCAGCTCATGGT...GGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCCATTCAGGCCCTGGTTaGTGGGCCCCTGTGCCACGA +
Preference number: 4 (lower is better)
Translates to: PCHPERAWATGPEQDTSTHSGPG*WAPVPR
Trigger: TCGTGGCACAGGGGCCCACCAACCAGGGCCTGAATG...GGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp TTCAGAAGGCCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACGGGGCGGCTCTCGTGTaGCGGCTGCAGCAGCGTGTA +
Preference number: 4 (lower is better)
Translates to: FRRPCHPERAWATGPEQDGAALV*RLQQRV
Trigger: TACACGCTGCTGCAGCCGCCACACGAGAGCCGCCCC...GTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGGCCTTCTGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp AGCGCCTCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGGGGGCGGCTCTCGTGTaGCGGCTGCAGCAGCGTGTA +
Preference number: 4 (lower is better)
Translates to: SASARGRKCGGKRAPWEGGAALV*RLQQRV
Trigger: TACACGCTGCTGCAGCCGCCACACGAGAGCCGCCCC...CCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGAGGCGCT
69% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGCGTGCCCCGGGGCGGCTCTCGTGTaGCGGCTGCAGCAGCGTGTA +
Preference number: 4 (lower is better)
Translates to: VPSRQPRLSATSLRPACPGAALV*RLQQRV
Trigger: TACACGCTGCTGCAGCCGCCACACGAGAGCCGCCCC...GGGGCACGCTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTGTCTGGGGGCCCCGTCCAGGCCCTaGCTCTCAGCGCTCTCGGAG +
Preference number: 4 (lower is better)
Translates to: DPRRNTDRFPRQGWLCLGAPSRP*LSALSE
Trigger: CTCCGAGAGCGCTGAGAGCCAGGGCCTGGACGGGGC...CCCCAGACAGAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp AGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCGCCCCGTCCAGGCCCTaGCTCTCAGCGCTCTCGGAG +
Preference number: 4 (lower is better)
Translates to: RSTKVHGPWEVPSRQPRLAPSRP*LSALSE
Trigger: CTCCGAGAGCGCTGAGAGCCAGGGCCTGGACGGGGC...GAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CAGAAGGCCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACACTCTCCTGGCCCTGGCTaGGGCCCAGCTCCATGTCCA +
Preference number: 4 (lower is better)
Translates to: QKALPPREGVGYGPGARHSPGPG*GPAPCP
Trigger: TGGACATGGAGCTGGGCCCCAGCCAGGGCCAGGAGA...GTGTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGGCCTTCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGCTGGCTGTGGGCCCTGCCTTGGGCCTGGTCCTaGCCTTGTGAGTCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: GVGYGPGARHLHRWLWALPWAWS*PCESCS
Trigger: GGAACAGGACTCACAAGGCCAGGACCAGGCCCAAGG...CAGGGCCCACAGCCAGCGGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp AGGGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGCTGGCTGTGGGCCCCCTTGGGCCTGGTCCTaGCCTTGTGAGTCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: RAWATGPEQDTSTAGCGPPWAWS*PCESCS
Trigger: GGAACAGGACTCACAAGGCCAGGACCAGGCCCAAGG...GGGCCCACAGCCAGCGGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GCCGGAGGCTCTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTTGCGCGCCTTGGGCCTaGTCCTGGCCTTGTGAGTCC +
Preference number: 4 (lower is better)
Translates to: AGGSAPGAQRSTGRGKSPCAPWA*SWPCES
Trigger: GGACTCACAAGGCCAGGACCAGGCCCAAGGCGCGCA...AGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAGAGCCTCCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GCCGGAGGCTCTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTGCACTGCAGGGCTCGTaGGACGAGAGCTTCCACCGG +
Preference number: 4 (lower is better)
Translates to: AGGSAPGAQRSTGRGKSPALQGS*DESFHR
Trigger: CCGGTGGAAGCTCTCGTCCCACGAGCCCTGCAGTGC...AGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAGAGCCTCCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp TTCAGAAGGCCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACCCCCTGTGGTGCAGGTaGCACTGCAGGGCTCGTGGG +
Preference number: 4 (lower is better)
Translates to: FRRPCHPERAWATGPEQDPLWCR*HCRARG
Trigger: CCCACGAGCCCTGCAGTGCCACCTGCACCACAGGGG...GTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGGCCTTCTGAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp AGCGCCTCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCCCCTGTGGTGCAGGTaGCACTGCAGGGCTCGTGGG +
Preference number: 4 (lower is better)
Translates to: SASARGRKCGGKRAPWEGPLWCR*HCRARG
Trigger: CCCACGAGCCCTGCAGTGCCACCTGCACCACAGGGG...CCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGAGGCGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CAGAAGGCCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACACCCAGCGCAGAACTCGTaGACAGGCTCGGGACGGGTC +
Preference number: 4 (lower is better)
Translates to: QKALPPREGVGYGPGARHPAQNS*TGSGRV
Trigger: GACCCGTCCCGAGCCTGTCCACGAGTTCTGCGCTGG...GTGTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGGCCTTCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGTCTCCCACCTGGGCTaGCACTCCCTCCCAGCGCAG +
Preference number: 4 (lower is better)
Translates to: LPQEHKGPRAVGSPLSTAVSHLG*HSLPAQ
Trigger: CTGCGCTGGGAGGGAGTGCCAGCCCAGGTGGGAGAC...GGCTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp AGCGCCTCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGTCCGACATCTCCCACTaGGGCCCGCAGGCGGGGTTC +
Preference number: 4 (lower is better)
Translates to: SASARGRKCGGKRAPWEGSDISH*GPQAGF
Trigger: GAACCCCGCCTGCGGGCCCCAGTGGGAGATGTCGGA...CCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGAGGCGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGCTGGCTGTGGGCCCTGTGCGCTCCCCACACTTaGCAGTGCACTCGGACCACT +
Preference number: 4 (lower is better)
Translates to: GVGYGPGARHLHRWLWALCAPHT*QCTRTT
Trigger: AGTGGTCCGAGTGCACTGCCAAGTGTGGGGAGCGCA...CAGGGCCCACAGCCAGCGGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp AGGGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGCTGGCTGTGGGCCCCTACCCGTCCGTCGCTaGTCTTGCAGTACACGTGCC +
Preference number: 4 (lower is better)
Translates to: RAWATGPEQDTSTAGCGPLPVRR*SCSTRA
Trigger: GGCACGTGTACTGCAAGACCAGCGACGGACGGGTAG...GGGCCCACAGCCAGCGGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGCTGGCTGTGGGCCCTGTCTGCGGCTTCCCGTTaGCCAGCTCCATGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: GVGYGPGARHLHRWLWALSAASR*PAPCRA
Trigger: TGCTCTGCATGGAGCTGGCCAACGGGAAGCCGCAGA...CAGGGCCCACAGCCAGCGGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp TGGGCAAGCGCCTCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGCCTCGGGAGGCTTCTTaGCGAGCCCGCACTCGGGGC +
Preference number: 4 (lower is better)
Translates to: WASASARGRKCGGKRAPWPREAS*RARTRG
Trigger: GCCCCGAGTGCGGGCTCGCCAAGAAGCCTCCCGAGG...CCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGAGGCGCTTGCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CTCTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGCCTCGGGAGGCTTCTTaGCGAGCCCGCACTCGGGGC +
Preference number: 4 (lower is better)
Translates to: LCPRSTKVHGPWEVPSRQPREAS*RARTRG
Trigger: GCCCCGAGTGCGGGCTCGCCAAGAAGCCTCCCGAGG...CTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCCCTCGGGAGGCTTCTTaGCGAGCCCGCACTCGGGGC +
Preference number: 4 (lower is better)
Translates to: GKRAPWEGLHKREHAWASPREAS*RARTRG
Trigger: GCCCCGAGTGCGGGCTCGCCAAGAAGCCTCCCGAGG...GGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GCCGGAGGCTCTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCCACCCCGCAGGTCTTaGTGCACTCTGACCAGGGGC +
Preference number: 4 (lower is better)
Translates to: AGGSAPGAQRSTGRGKSPPPRRS*CTLTRG
Trigger: GCCCCTGGTCAGAGTGCACCAAGACCTGCGGGGTGG...AGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAGAGCCTCCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCTGCCTGAGCCCCATCTGGGGGCTCCGTaGGGCAGGGCTGCAGATCAC +
Preference number: 4 (lower is better)
Translates to: GRGSIRGSTPGPPWLPEPHLGAP*GRAADH
Trigger: GTGATCTGCAGCCCTGCCCCACGGAGCCCCCAGATG...GGGCTCAGGCAGCCAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGCGTGCCCCCACCCAGAGAGGGCGTaGGCTACGGGCCCGGAGCAA +
Preference number: 4 (lower is better)
Translates to: VPSRQPRLSATSLRPACPHPERA*ATGPEQ
Trigger: TTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTG...GGGGCACGCTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGCCTCCCCAAACGTCCCGTaGGCAAGCGCCTCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: LPQEHKGPRAVGSPLSTASPNVP*ASASAR
Trigger: CCGGGCAGAGGCGCTTGCCCACGGGACGTTTGGGGA...GGCTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCTGCCTGAGCCCAGACGGAGCAGCCGCTaGCCTGAGGTTACCGGGGAG +
Preference number: 4 (lower is better)
Translates to: GRGSIRGSTPGPPWLPEPRRSSR*PEVTGE
Trigger: CTCCCCGGTAACCTCAGGCCAGCGGCTGCTCCGTCT...GGGCTCAGGCAGCCAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393061.7
CDS-3UTR TCA 90 bp CAGAAGGCCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACACGTCCGTGGACCCGGTTaGCACTGTGTCCCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: QKALPPREGVGYGPGARHVRGPG*HCVPSY
Trigger: GTAGCTGGGGACACAGTGTCAACCGGGTCCACGGAC...GTGTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGGCCTTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp GCCGGAGGCTCTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTTGGGCCGCCTGTACTTaGCCACCGTGCCTGCGATGT +
Preference number: 4 (lower is better)
Translates to: AGGSAPGAQRSTGRGKSPWAACT*PPCLRC
Trigger: ACATCGCAGGCACGGTGGTCAAGTACAGGCGGCCCA...AGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAGAGCCTCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp TCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATCAGGCCCAGCCGCTCTaGGGAGGCCTGGCCGTAGAG +
Preference number: 4 (lower is better)
Translates to: SARGRKCGGKRAPWEGLHQAQPL*GGLAVE
Trigger: CTCTACGGCCAGGCCTCCTCAGAGCGGCTGGGCCTG...ATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCTGCCTGAGCCCTCGGGGCCCAGCCAGTaGCCAGGCCTCAAGGTTATC +
Preference number: 4 (lower is better)
Translates to: GRGSIRGSTPGPPWLPEPSGPSQ*PGLKVI
Trigger: GATAACCTTGAGGCCTGGGCACTGGCTGGGCCCCGA...GGGCTCAGGCAGCCAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCTGCCTGAGAGGCCGTGGCGTCGGTaGCCCCCTCCAGGCTATTGG +
Preference number: 4 (lower is better)
Translates to: HGRGSIRGSTPGPPWLPERPWRR*PPPGYW
Trigger: CCAATAGCCTGGAGGGGGGCACCGACGCCACGGCCT...CTCAGGCAGCCAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTGCTTGGACGTGCCCGTaGAGGTCCTGTTCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: AGRELHGRGSIRGSTPGPAWTCP*RSCSRG
Trigger: GCCCCGGGAACAGGACCTGCACGGGCACGTCCAAGC...AGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCTGCCTGAGCCCGGTACCGCTTGGACGTaGCCGTGCAGGTCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: GRGSIRGSTPGPPWLPEPGTAWT*PCRSCS
Trigger: GGAACAGGACCTGCACGGGCACGTCCAAGCGGTACC...GGGCTCAGGCAGCCAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp AGGGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGCTGGCTGTGGGCCCTTGAAGGAGACGCACTaGTCCTCGCGGAAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: RAWATGPEQDTSTAGCGPLKETH*SSRKLL
Trigger: GAGGAGCTTCCGCGAGGAGCAGTGCGTCTCCTTCAA...GGGCCCACAGCCAGCGGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGGCGGGGACCATGAGCTaGCGCTGGCCGTCCACGGTG +
Preference number: 4 (lower is better)
Translates to: RGKSPLDSRGSVPRLLGQAGTMS*RWPSTV
Trigger: CACCGTGGACGGCCAGCGGCAGCTCATGGTCCCCGC...CTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CAGAAGGCCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACACTCACGTGGGTGCAGCTaGTACCGTCCCCCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: QKALPPREGVGYGPGARHSRGCS*YRPPGR
Trigger: TCTGCCAGGGGGACGGTAGCAGCTGCACCCACGTGA...GTGTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGGCCTTCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGCGTGCCCCTGCCCGTCACGTGGGTaGAGCTGCTACCGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: VPSRQPRLSATSLRPACPCPSRG*SCYRPP
Trigger: AGGGGGACGGTAGCAGCTGCACCCACGTGACGGGCA...GGGGCACGCTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGCCTGCCCGTCACGTGGGTaGAGCTGCTACCGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: LPQEHKGPRAVGSPLSTACPSRG*SCYRPP
Trigger: AGGGGGACGGTAGCAGCTGCACCCACGTGACGGGCA...GGCTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp AGCGCCTCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGAGCCCTCTCCGCAGGTaGGCGAACACTCGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SASARGRKCGGKRAPWEGSPLRR*ANTRSS
Trigger: GCTGGAGCGAGTGTTCGCGCACCTGCGGAGAGGGCT...CCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGAGGCGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTGTCTGGGGCCGCACGGCCTCGGCTaGCTCGCACAGGTCGCTGTA +
Preference number: 4 (lower is better)
Translates to: DPRRNTDRFPRQGWLCLGPHGLG*LAQVAV
Trigger: TACAGCGACCTGTGCGAGGCAGCCGAGGCCGTGCGG...CCCCAGACAGAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCCCGCACGGCCTCGGCTaGCTCGCACAGGTCGCTGTA +
Preference number: 4 (lower is better)
Translates to: GKRAPWEGLHKREHAWASPHGLG*LAQVAV
Trigger: TACAGCGACCTGTGCGAGGCAGCCGAGGCCGTGCGG...GGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTGTCTGGGGGGTTCCGGCAGGTCTTaGGTTCCTCGGGCCGCACGG +
Preference number: 4 (lower is better)
Translates to: DPRRNTDRFPRQGWLCLGGSGRS*VPRAAR
Trigger: CCGTGCGGCCCGAGGAACGCAAGACCTGCCGGAACC...CCCCAGACAGAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp TCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATCGCACTCGGGGCCACTaGGCGTCTGCGGCTTCCCGT +
Preference number: 4 (lower is better)
Translates to: SARGRKCGGKRAPWEGLHRTRGH*ASAASR
Trigger: ACGGGAAGCCGCAGACGCGCAGTGGCCCCGAGTGCG...ATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CAGAAGGCCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACACGCCCGGGGTAGAAAGTaGGGCGGGAAGAGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: QKALPPREGVGYGPGARHARGRK*GGKRAP
Trigger: TGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGC...GTGTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGGCCTTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCTGCCTGAGCCCAGAGCTGGTACCGCTTaGACGTGCCCGTGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: GRGSIRGSTPGPPWLPEPRAGTA*TCPCRS
Trigger: GGACCTGCACGGGCACGTCCAAGCGGTACCAGCTCT...GGGCTCAGGCAGCCAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCTGCCTGAGCCCCATTCAGGCCCTGGTTaGTGGGCCCCTGTGCCACGA +
Preference number: 4 (lower is better)
Translates to: GRGSIRGSTPGPPWLPEPHSGPG*WAPVPR
Trigger: TCGTGGCACAGGGGCCCACCAACCAGGGCCTGAATG...GGGCTCAGGCAGCCAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp ACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGCCCCGTCCAGGCCCTaGCTCTCAGCGCTCTCGGAG +
Preference number: 4 (lower is better)
Translates to: TGRGKSPLDSRGSVPRLLAPSRP*LSALSE
Trigger: CTCCGAGAGCGCTGAGAGCCAGGGCCTGGACGGGGC...TAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTGTCTGGGGGAGGATGTCCAGGCCCGGGTaGCCGAACAGCCGGTTGTCC +
Preference number: 4 (lower is better)
Translates to: HAGTRTGSHGRGGSVWGRMSRPG*PNSRLS
Trigger: GGACAACCGGCTGTTCGGCCACCCGGGCCTGGACAT...CCTCCCCCAGACAGAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp AGCGCCTCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGTCTCCTGGCCCTGGCTaGGGCCCAGCTCCATGTCCA +
Preference number: 4 (lower is better)
Translates to: SASARGRKCGGKRAPWEGSPGPG*GPAPCP
Trigger: TGGACATGGAGCTGGGCCCCAGCCAGGGCCAGGAGA...CCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGAGGCGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp AGCGCCTCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGGCTCGCACACCTCGTTaGTCTCCTGGCCCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: SASARGRKCGGKRAPWEGARTPR*SPGPGW
Trigger: CCAGCCAGGGCCAGGAGACCAACGAGGTGTGCGAGC...CCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGAGGCGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp TTCAGAAGGCCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACGCTCGCACACCTCGTTaGTCTCCTGGCCCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: FRRPCHPERAWATGPEQDARTPR*SPGPGW
Trigger: CCAGCCAGGGCCAGGAGACCAACGAGGTGTGCGAGC...GTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGGCCTTCTGAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp AGGGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGCTGGCTGTGGGCCCGCCGAGAAGAACTCCTaGGAGGCGAAGTGGGTGTCA +
Preference number: 4 (lower is better)
Translates to: RAWATGPEQDTSTAGCGPAEKNS*EAKWVS
Trigger: TGACACCCACTTCGCCTCCCAGGAGTTCTTCTCGGC...GGGCCCACAGCCAGCGGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGCGTGCCCCGCAGTGCGCGCCTTGGGCCTaGTCCTGGCCTTGTGAGTCC +
Preference number: 4 (lower is better)
Translates to: PLDSRGSVPRLLGQRAPQCAPWA*SWPCES
Trigger: GGACTCACAAGGCCAGGACCAGGCCCAAGGCGCGCA...CTGCGGGGCACGCTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp AGCGCCTCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGTGCGCGCCTTGGGCCTaGTCCTGGCCTTGTGAGTCC +
Preference number: 4 (lower is better)
Translates to: SASARGRKCGGKRAPWEGCAPWA*SWPCES
Trigger: GGACTCACAAGGCCAGGACCAGGCCCAAGGCGCGCA...CCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGAGGCGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp TTCAGAAGGCCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACGCACTGCAGGGCTCGTaGGACGAGAGCTTCCACCGG +
Preference number: 4 (lower is better)
Translates to: FRRPCHPERAWATGPEQDALQGS*DESFHR
Trigger: CCGGTGGAAGCTCTCGTCCCACGAGCCCTGCAGTGC...GTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGGCCTTCTGAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp AGCGCCTCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGGCACTGCAGGGCTCGTaGGACGAGAGCTTCCACCGG +
Preference number: 4 (lower is better)
Translates to: SASARGRKCGGKRAPWEGALQGS*DESFHR
Trigger: CCGGTGGAAGCTCTCGTCCCACGAGCCCTGCAGTGC...CCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGAGGCGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTGTCTGGGGGAGGTGCTCGTCTCCCACCTaGGCTGGCACTCCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: HAGTRTGSHGRGGSVWGRCSSPT*AGTPSQ
Trigger: CTGGGAGGGAGTGCCAGCCCAGGTGGGAGACGAGCA...CCTCCCCCAGACAGAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp TGGGCAAGCGCCTCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGTCCGACATCTCCCACTaGGGCCCGCAGGCGGGGTTC +
Preference number: 4 (lower is better)
Translates to: WASASARGRKCGGKRAPWSDISH*GPQAGF
Trigger: GAACCCCGCCTGCGGGCCCCAGTGGGAGATGTCGGA...CCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGAGGCGCTTGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCTGCGCTCCCCACACTTaGCAGTGCACTCGGACCACT +
Preference number: 4 (lower is better)
Translates to: PCHPERAWATGPEQDTSTCAPHT*QCTRTT
Trigger: AGTGGTCCGAGTGCACTGCCAAGTGTGGGGAGCGCA...GGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp ACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTACCCCGCGCCCGCAGGTaGTGTTGCACCGCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: TGRGKSPLDSRGSVPRLLPRARR*CCTAPS
Trigger: ACTGGGAGCGGTGCAACACCACCTGCGGGCGCGGGG...TAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGCCCCGCGCCCGCAGGTaGTGTTGCACCGCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: RGKSPLDSRGSVPRLLGQPRARR*CCTAPS
Trigger: ACTGGGAGCGGTGCAACACCACCTGCGGGCGCGGGG...CTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCTCTGCGGCTTCCCGTTaGCCAGCTCCATGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: PCHPERAWATGPEQDTSTSAASR*PAPCRA
Trigger: TGCTCTGCATGGAGCTGGCCAACGGGAAGCCGCAGA...GGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp TCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATCCTCGGGAGGCTTCTTaGCGAGCCCGCACTCGGGGC +
Preference number: 4 (lower is better)
Translates to: SARGRKCGGKRAPWEGLHPREAS*RARTRG
Trigger: GCCCCGAGTGCGGGCTCGCCAAGAAGCCTCCCGAGG...ATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGCGTGCCCCCCACCCCGCAGGTCTTaGTGCACTCTGACCAGGGGC +
Preference number: 4 (lower is better)
Translates to: VPSRQPRLSATSLRPACPPPRRS*CTLTRG
Trigger: GCCCCTGGTCAGAGTGCACCAAGACCTGCGGGGTGG...GGGGCACGCTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGAC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp AGCGCCTCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGGTGCCTGGCTGGTCCTaGCAGCTGTCATCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: SASARGRKCGGKRAPWEGVPGWS*QLSSGG
Trigger: GCCCCCAGATGACAGCTGCCAGGACCAGCCAGGCAC...CCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGAGGCGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GCCGGAGGCTCTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCCCAGGAGGGGCGCTTaGTCTTCATCTGGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: AGGSAPGAQRSTGRGKSPPRRGA*SSSGRG
Trigger: GCCCCTTCCAGATGAAGACCAAGCGCCCCTCCTGGG...AGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAGAGCCTCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCACCCAGAGAGGGCGTaGGCTACGGGCCCGGAGCAA +
Preference number: 4 (lower is better)
Translates to: AGRELHGRGSIRGSTPGPHPERA*ATGPEQ
Trigger: TTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTG...AGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCTGCCTGAGCACCCAGAGAGGGCGTaGGCTACGGGCCCGGAGCAA +
Preference number: 4 (lower is better)
Translates to: HGRGSIRGSTPGPPWLPEHPERA*ATGPEQ
Trigger: TTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTG...CTCAGGCAGCCAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTCACCCAGAGAGGGCGTaGGCTACGGGCCCGGAGCAA +
Preference number: 4 (lower is better)
Translates to: HGPWEVPSRQPRLSATSLHPERA*ATGPEQ
Trigger: TTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTG...AAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCTGCCTGAGCCCTCCCGGGTCCAGAACTaGGGGCCACATGTCGGGTGT +
Preference number: 4 (lower is better)
Translates to: GRGSIRGSTPGPPWLPEPSRVQN*GPHVGC
Trigger: ACACCCGACATGTGGCCCCCAGTTCTGGACCCGGGA...GGGCTCAGGCAGCCAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393061.7
CDS-3UTR TCA 90 bp TTCAGAAGGCCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACCCCCTCGCAGGTCAGTaGGCTTGCAGGATGTGCCGT +
Preference number: 4 (lower is better)
Translates to: FRRPCHPERAWATGPEQDPLAGQ*ACRMCR
Trigger: ACGGCACATCCTGCAAGCTCACTGACCTGCGAGGGG...GTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGGCCTTCTGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp GTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGCGTGCCCCCCCCTCGCAGGTCAGTaGGCTTGCAGGATGTGCCGT +
Preference number: 4 (lower is better)
Translates to: VPSRQPRLSATSLRPACPPLAGQ*ACRMCR
Trigger: ACGGCACATCCTGCAAGCTCACTGACCTGCGAGGGG...GGGGCACGCTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGAC
67% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp CTCTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGCCAGGTAGGACCCGTTaGGCAGGTAAGGGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: LCPRSTKVHGPWEVPSRQPGRTR*AGKGQP
Trigger: GGGCTGGCCCTTACCTGCTCAACGGGTCCTACCTGG...CTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp GCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCAGGTAGGACCCGTTaGGCAGGTAAGGGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: AGRELHGRGSIRGSTPGPPGRTR*AGKGQP
Trigger: GGGCTGGCCCTTACCTGCTCAACGGGTCCTACCTGG...AGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp CACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTCCAGGTAGGACCCGTTaGGCAGGTAAGGGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: HGPWEVPSRQPRLSATSLPGRTR*AGKGQP
Trigger: GGGCTGGCCCTTACCTGCTCAACGGGTCCTACCTGG...AAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp AGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCCTGGTCCTGGCCTTGTaGGTCCTGTTCCCGGCCGAG +
Preference number: 4 (lower is better)
Translates to: RSTKVHGPWEVPSRQPRLLVLAL*VLFPAE
Trigger: CTCGGCCGGGAACAGGACTCACAAGGCCAGGACCAG...GAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp GCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCTGGTCCTGGCCTTGTaGGTCCTGTTCCCGGCCGAG +
Preference number: 4 (lower is better)
Translates to: AGRELHGRGSIRGSTPGPLVLAL*VLFPAE
Trigger: CTCGGCCGGGAACAGGACTCACAAGGCCAGGACCAG...AGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp CACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTTGCAGTACACGTGCCTaGTGGTGCGGCCTTGCCCGC +
Preference number: 4 (lower is better)
Translates to: HGPWEVPSRQPRLSATSLCSTRA*WCGLAR
Trigger: GCGGGCAAGGCCGCACCATCAGGCACGTGTACTGCA...AAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp CATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCTGCCTGAGTGCAGTACACGTGCCTaGTGGTGCGGCCTTGCCCGC +
Preference number: 4 (lower is better)
Translates to: HGRGSIRGSTPGPPWLPECSTRA*WCGLAR
Trigger: GCGGGCAAGGCCGCACCATCAGGCACGTGTACTGCA...CTCAGGCAGCCAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp GCCGGAGGCTCTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTGGTCTTGGTGCACTCTaGCCAGGGGCTGGTGTACCA +
Preference number: 4 (lower is better)
Translates to: AGGSAPGAQRSTGRGKSPGLGAL*PGAGVP
Trigger: TGGTACACCAGCCCCTGGTCAGAGTGCACCAAGACC...AGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAGAGCCTCCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp AGCGCCTCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGTCGGGGCCCAGCCAGTaGCCAGGCCTCAAGGTTATC +
Preference number: 4 (lower is better)
Translates to: SASARGRKCGGKRAPWEGSGPSQ*PGLKVI
Trigger: GATAACCTTGAGGCCTGGGCACTGGCTGGGCCCCGA...CCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGAGGCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGCGTGCCCCGACTTCCTCCTCTGCTaGAGGCAGTGCCGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: VPSRQPRLSATSLRPACPDFLLC*RQCRSW
Trigger: CCAGGAGCGGCACTGCCTGCAGCAGAGGAGGAAGTC...GGGGCACGCTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGCGTGCCCCGCAGGACTTCCTCCTCTGCTaGAGGCAGTGCCGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: PLDSRGSVPRLLGQRAPQDFLLC*RQCRSW
Trigger: CCAGGAGCGGCACTGCCTGCAGCAGAGGAGGAAGTC...CTGCGGGGCACGCTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGCGTGCCCCACGGACTTCCTCCTCTaGTGCAGGCAGTGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: VPSRQPRLSATSLRPACPTDFLL*CRQCRS
Trigger: GGAGCGGCACTGCCTGCAGCAGAGGAGGAAGTCCGT...GGGGCACGCTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGCGTGCCCCGCAGACGGACTTCCTCCTCTaGTGCAGGCAGTGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: PLDSRGSVPRLLGQRAPQTDFLL*CRQCRS
Trigger: GGAGCGGCACTGCCTGCAGCAGAGGAGGAAGTCCGT...CTGCGGGGCACGCTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGCCTCACGTGGGTGCAGCTaGTACCGTCCCCCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: LPQEHKGPRAVGSPLSTASRGCS*YRPPGR
Trigger: TCTGCCAGGGGGACGGTAGCAGCTGCACCCACGTGA...GGCTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCTGCCTGAGTGCCCGTCACGTGGGTaGAGCTGCTACCGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: HGRGSIRGSTPGPPWLPECPSRG*SCYRPP
Trigger: AGGGGGACGGTAGCAGCTGCACCCACGTGACGGGCA...CTCAGGCAGCCAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CAGAAGGCCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACACTGGCAACCCTGTCGCTaGTCAGCTCCAGGTAGGACC +
Preference number: 4 (lower is better)
Translates to: QKALPPREGVGYGPGARHWQPCR*SAPGRT
Trigger: GGTCCTACCTGGAGCTGAGCAGCGACAGGGTTGCCA...GTGTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGGCCTTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CTCTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGGACTCACGCCTTGCTTaGGCGCCTTGGGCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: LCPRSTKVHGPWEVPSRQDSRLA*APWAWS
Trigger: GGACCAGGCCCAAGGCGCGCAAGCAAGGCGTGAGTC...CTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp AGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCGACTCACGCCTTGCTTaGGCGCCTTGGGCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: RSTKVHGPWEVPSRQPRLDSRLA*APWAWS
Trigger: GGACCAGGCCCAAGGCGCGCAAGCAAGGCGTGAGTC...GAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp TCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATGCGGGACTCACGCCTTaGTTGCGCGCCTTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: SARGRKCGGKRAPWEGLHAGLTP*LRALGL
Trigger: CAGGCCCAAGGCGCGCAAGCAAGGCGTGAGTCCCGC...ATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGCCCTCTCCGCAGGTaGGCGAACACTCGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: HGPWEVPSRQPRLSATSLSPLRR*ANTRSS
Trigger: GCTGGAGCGAGTGTTCGCGCACCTGCGGAGAGGGCT...AAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCTGCCTGAGCCCCCCCACACTTGGCAGTaGACTCGGACCACTCCGACA +
Preference number: 4 (lower is better)
Translates to: GRGSIRGSTPGPPWLPEPPHTWQ*TRTTPT
Trigger: TGTCGGAGTGGTCCGAGTGCACTGCCAAGTGTGGGG...GGGCTCAGGCAGCCAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCC
67% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGCGTGCCCCGCAGCACAGGGCGGGCCCGTaGAGTTCTTCTCCCCTACAG +
Preference number: 4 (lower is better)
Translates to: PLDSRGSVPRLLGQRAPQHRAGP*SSSPLQ
Trigger: CTGTAGGGGAGAAGAACTGCACGGGCCCGCCCTGTG...CTGCGGGGCACGCTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGCGTGCCCCCACAGGGCGGGCCCGTaGAGTTCTTCTCCCCTACAG +
Preference number: 4 (lower is better)
Translates to: VPSRQPRLSATSLRPACPHRAGP*SSSPLQ
Trigger: CTGTAGGGGAGAAGAACTGCACGGGCCCGCCCTGTG...GGGGCACGCTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp AGCGCCTCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTGATGGTGCGGCCTTaGCCGCAGCTTCCACTGCAC +
Preference number: 4 (lower is better)
Translates to: SASARGRKCGGKRAPWEGLMVRP*PQLPLH
Trigger: GTGCAGTGGAAGCTGCGGGCAAGGCCGCACCATCAG...CCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGAGGCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCTGCCTGAGCCCCGTTGGCCAGCTCCATaGAGAGCACCAGCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: GRGSIRGSTPGPPWLPEPRWPAP*RAPAAS
Trigger: AGAAGCGGCTGGTGCTCTGCATGGAGCTGGCCAACG...GGGCTCAGGCAGCCAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp AAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGCGCACTCGGGGCCACTaGGCGTCTGCGGCTTCCCGT +
Preference number: 4 (lower is better)
Translates to: KRAPWEGLHKREHAWASLRTRGH*ASAASR
Trigger: ACGGGAAGCCGCAGACGCGCAGTGGCCCCGAGTGCG...CAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGCCTCCGTGGGGCAGGGCTaGAGATCACAGGCCTGTCTG +
Preference number: 4 (lower is better)
Translates to: LPQEHKGPRAVGSPLSTASVGQG*RSQACL
Trigger: CAGACAGGCCTGTGATCTGCAGCCCTGCCCCACGGA...GGCTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp TTCAGAAGGCCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACTCCGTGGGGCAGGGCTaGAGATCACAGGCCTGTCTG +
Preference number: 4 (lower is better)
Translates to: FRRPCHPERAWATGPEQDSVGQG*RSQACL
Trigger: CAGACAGGCCTGTGATCTGCAGCCCTGCCCCACGGA...GTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGGCCTTCTGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGCCAGCGGCAGCACGCCTTaGTGTAGTACCAGTGCCCGC +
Preference number: 4 (lower is better)
Translates to: LPQEHKGPRAVGSPLSTASGSTP*CSTSAR
Trigger: GCGGGCACTGGTACTACAGCAAGGCGTGCTGCCGCT...GGCTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCGGGTGCCGGAGGCTCTaGCCCAGGAGCACAAAGGTC +
Preference number: 4 (lower is better)
Translates to: GRGKSPLDSRGSVPRLLGGCRRL*PRSTKV
Trigger: GACCTTTGTGCTCCTGGGGCAGAGCCTCCGGCACCC...GCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTGTCTGGGGGAGGTCCTTCAGAAGGCCCTaGCACCCAGAGAGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: HAGTRTGSHGRGGSVWGRSFRRP*HPERAW
Trigger: CCACGCCCTCTCTGGGTGGCAGGGCCTTCTGAAGGA...CCTCCCCCAGACAGAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp TTCAGAAGGCCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACTCCTTCAGAAGGCCCTaGCACCCAGAGAGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: FRRPCHPERAWATGPEQDSFRRP*HPERAW
Trigger: CCACGCCCTCTCTGGGTGGCAGGGCCTTCTGAAGGA...GTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGGCCTTCTGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGCTGGCTGTGGGCCCTGCACGTTGGGCTCGCCTaGAAGTTTCCTTCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: GVGYGPGARHLHRWLWALHVGLA*KFPSEG
Trigger: GCCTTCTGAAGGAAACTTGCAGGCGAGCCCAACGTG...CAGGGCCCACAGCCAGCGGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTGTCTGGGGGAGGGCCCGGGGTAGAAAGTaGGGCGGGAAGAGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: HAGTRTGSHGRGGSVWGRARGRK*GGKRAP
Trigger: TGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGC...CCTCCCCCAGACAGAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp ACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAAGCACTGACGCTGACTaGAGGGGCGGGGGCCGAGGT +
Preference number: 4 (lower is better)
Translates to: TGRGKSPLDSRGSVPRLLSTDAD*RGGGRG
Trigger: ACCTCGGCCCCCGCCCCTGCAGTCAGCGTCAGTGCT...TAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGCGTGAGTGCAGAGGCTaGGGCCCGGCCTCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: RGRKCGGKRAPWEGLHKRRECRG*GPASLS
Trigger: GGAGAGGGAGGCCGGGCCGCAGCCTCTGCACTCACG...CCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp AAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGAAAGGGGCGAGCGCTaGGGAGGGCAGACGGCGCCA +
Preference number: 4 (lower is better)
Translates to: KRAPWEGLHKREHAWASLERGER*GGQTAP
Trigger: TGGCGCCGTCTGCCCTCCGCAGCGCTCGCCCCTTTC...CAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CACAAACACAGGATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCGAAAGGGGCGAGCGCTaGGGAGGGCAGACGGCGCCA +
Preference number: 4 (lower is better)
Translates to: HKHRIHAGTRTGSHGRGGERGER*GGQTAP
Trigger: TGGCGCCGTCTGCCCTCCGCAGCGCTCGCCCCTTTC...GCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATCCTGTGTTTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp AGCGCCTCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGGCAGCCGTATGGCCCTaGTGCTGGAGACACCACCTG +
Preference number: 4 (lower is better)
Translates to: SASARGRKCGGKRAPWEGAAVWP*CWRHHL
Trigger: CAGGTGGTGTCTCCAGCACCAGGGCCATACGGCTGC...CCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGAGGCGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354484.8
CDS-3UTR CCA 90 bp CTCTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGGACCAGGGTACGCTTTaGGAAGAGCCCTCGGGGCCC +
Preference number: 4 (lower is better)
Translates to: LCPRSTKVHGPWEVPSRQDQGTL*EEPSGP
Trigger: GGGCCCCGAGGGCTCTTCCCAAAGCGTACCCTGGTC...CTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp AGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCGACCAGGGTACGCTTTaGGAAGAGCCCTCGGGGCCC +
Preference number: 4 (lower is better)
Translates to: RSTKVHGPWEVPSRQPRLDQGTL*EEPSGP
Trigger: GGGCCCCGAGGGCTCTTCCCAAAGCGTACCCTGGTC...GAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGCTGGCTGTGGGCCCTGCAGGCTATTGGATGTTaGGCTGTTGTCCGTGGACCC +
Preference number: 4 (lower is better)
Translates to: GVGYGPGARHLHRWLWALQAIGC*AVVRGP
Trigger: GGGTCCACGGACAACAGCCCAACATCCAATAGCCTG...CAGGGCCCACAGCCAGCGGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCCCCCCTCCAGGCTATTaGATGTTGGGCTGTTGTCCG +
Preference number: 4 (lower is better)
Translates to: PCHPERAWATGPEQDTSTPPPGY*MLGCCP
Trigger: CGGACAACAGCCCAACATCCAATAGCCTGGAGGGGG...GGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGG
67% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp TCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAGGCAGTGCCGCTCCTaGGATGTCACCCCACCCCCG +
Preference number: 4 (lower is better)
Translates to: SARGRKCGGKRAPWEGLHRQCRS*DVTPPP
Trigger: CGGGGGTGGGGTGACATCCCAGGAGCGGCACTGCCT...ATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp ACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAAGGCAGTGCCGCTCCTaGGATGTCACCCCACCCCCG +
Preference number: 4 (lower is better)
Translates to: TGRGKSPLDSRGSVPRLLRQCRS*DVTPPP
Trigger: CGGGGGTGGGGTGACATCCCAGGAGCGGCACTGCCT...TAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGCGTGCCCCGCAGTCAGGCCCTGGTTGGTaGGCCCCTGTGCCACGATGT +
Preference number: 4 (lower is better)
Translates to: PLDSRGSVPRLLGQRAPQSGPGW*APVPRC
Trigger: ACATCGTGGCACAGGGGCCCACCAACCAGGGCCTGA...CTGCGGGGCACGCTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGGCCCCGTCCAGGCCCTaGCTCTCAGCGCTCTCGGAG +
Preference number: 4 (lower is better)
Translates to: GVESAAGRELHGRGSIRGAPSRP*LSALSE
Trigger: CTCCGAGAGCGCTGAGAGCCAGGGCCTGGACGGGGC...CCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCATGTCCAGGCCCGGGTaGCCGAACAGCCGGTTGTCC +
Preference number: 4 (lower is better)
Translates to: GKRAPWEGLHKREHAWASMSRPG*PNSRLS
Trigger: GGACAACCGGCTGTTCGGCCACCCGGGCCTGGACAT...GGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CAGAAGGCCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACACCCTCGGAGGAGCTGTTaGCAACCCTGTCGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: QKALPPREGVGYGPGARHPRRSC*QPCRCS
Trigger: TGAGCAGCGACAGGGTTGCCAACAGCTCCTCCGAGG...GTGTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGGCCTTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGCGTGCCCCGCAGCTTGCTTGCGCGCCTTaGGCCTGGTCCTGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: PLDSRGSVPRLLGQRAPQLACAP*AWSWPC
Trigger: ACAAGGCCAGGACCAGGCCCAAGGCGCGCAAGCAAG...CTGCGGGGCACGCTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTGCACTGCAGGGCTCGTaGGACGAGAGCTTCCACCGG +
Preference number: 4 (lower is better)
Translates to: AGRELHGRGSIRGSTPGPALQGS*DESFHR
Trigger: CCGGTGGAAGCTCTCGTCCCACGAGCCCTGCAGTGC...AGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp TCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATCCCCTGTGGTGCAGGTaGCACTGCAGGGCTCGTGGG +
Preference number: 4 (lower is better)
Translates to: SARGRKCGGKRAPWEGLHPLWCR*HCRARG
Trigger: CCCACGAGCCCTGCAGTGCCACCTGCACCACAGGGG...ATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCTGCCTGAGCCAGCGCAGAACTCGTaGACAGGCTCGGGACGGGTC +
Preference number: 4 (lower is better)
Translates to: HGRGSIRGSTPGPPWLPEPAQNS*TGSGRV
Trigger: GACCCGTCCCGAGCCTGTCCACGAGTTCTGCGCTGG...CTCAGGCAGCCAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp ACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGTCTCCCACCTGGGCTaGCACTCCCTCCCAGCGCAG +
Preference number: 4 (lower is better)
Translates to: TGRGKSPLDSRGSVPRLLVSHLG*HSLPAQ
Trigger: CTGCGCTGGGAGGGAGTGCCAGCCCAGGTGGGAGAC...TAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp ACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTATCCGACATCTCCCACTaGGGCCCGCAGGCGGGGTTC +
Preference number: 4 (lower is better)
Translates to: TGRGKSPLDSRGSVPRLLSDISH*GPQAGF
Trigger: GAACCCCGCCTGCGGGCCCCAGTGGGAGATGTCGGA...TAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp AGCGCCTCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGAGCAGCGGATGTCCCTaGTCACCACACTGCGCTCCC +
Preference number: 4 (lower is better)
Translates to: SASARGRKCGGKRAPWEGSSGCP*SPHCAP
Trigger: GGGAGCGCAGTGTGGTGACCAGGGACATCCGCTGCT...CCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGAGGCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp AGGGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGCTGGCTGTGGGCCCGTCTCCATCTGGCACTaGGACTCAGGTACTACCCGT +
Preference number: 4 (lower is better)
Translates to: RAWATGPEQDTSTAGCGPVSIWH*DSGTTR
Trigger: ACGGGTAGTACCTGAGTCCCAGTGCCAGATGGAGAC...GGGCCCACAGCCAGCGGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CAGAAGGCCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACACGGATGGCCAGAGGCTTaGTCTCCATCTGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: QKALPPREGVGYGPGARHGWPEA*SPSGTG
Trigger: CCCAGTGCCAGATGGAGACCAAGCCTCTGGCCATCC...GTGTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGGCCTTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCTGCCTGAGCCCTCCTGGGCCAGCCAGTaGGCGGGACAGTTTTTGTCC +
Preference number: 4 (lower is better)
Translates to: GRGSIRGSTPGPPWLPEPSWASQ*AGQFLS
Trigger: GGACAAAAACTGTCCCGCCCACTGGCTGGCCCAGGA...GGGCTCAGGCAGCCAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CAAACACAGGATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCCCCCGCGCCCGCAGGTaGTGTTGCACCGCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: QTQDPRRNTDRFPRQGWLPRARR*CCTAPS
Trigger: ACTGGGAGCGGTGCAACACCACCTGCGGGCGCGGGG...GAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATCCTGTGTTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCATCTGGGGGCTCCGTaGGGCAGGGCTGCAGATCAC +
Preference number: 4 (lower is better)
Translates to: GRGKSPLDSRGSVPRLLGHLGAP*GRAADH
Trigger: GTGATCTGCAGCCCTGCCCCACGGAGCCCCCAGATG...GCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTCATCTGGGGGCTCCGTaGGGCAGGGCTGCAGATCAC +
Preference number: 4 (lower is better)
Translates to: HGPWEVPSRQPRLSATSLHLGAP*GRAADH
Trigger: GTGATCTGCAGCCCTGCCCCACGGAGCCCCCAGATG...AAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCTGCCTGAGCATCTGGGGGCTCCGTaGGGCAGGGCTGCAGATCAC +
Preference number: 4 (lower is better)
Translates to: HGRGSIRGSTPGPPWLPEHLGAP*GRAADH
Trigger: GTGATCTGCAGCCCTGCCCCACGGAGCCCCCAGATG...CTCAGGCAGCCAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGCTGGCAGCTGTCATCTaGGGGCTCCGTGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: RGKSPLDSRGSVPRLLGQLAAVI*GLRGAG
Trigger: CCCTGCCCCACGGAGCCCCCAGATGACAGCTGCCAG...CTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTGTCTGGGGGAGGGGCACAGTTGGTGCCTaGCTGGTCCTGGCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: HAGTRTGSHGRGGSVWGRGTVGA*LVLAAV
Trigger: GACAGCTGCCAGGACCAGCCAGGCACCAACTGTGCC...CCTCCCCCAGACAGAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp AGCGCCTCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGGGCACAGTTGGTGCCTaGCTGGTCCTGGCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: SASARGRKCGGKRAPWEGGTVGA*LVLAAV
Trigger: GACAGCTGCCAGGACCAGCCAGGCACCAACTGTGCC...CCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGAGGCGCT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGCGTGCCCCGCAGCCCAGGAGGGGCGCTTaGTCTTCATCTGGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: PLDSRGSVPRLLGQRAPQPRRGA*SSSGRG
Trigger: GCCCCTTCCAGATGAAGACCAAGCGCCCCTCCTGGG...CTGCGGGGCACGCTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGGGAAGAGAGCTCCATaGGAGGGGCTCCATAAGAGG +
Preference number: 4 (lower is better)
Translates to: PCHPERAWATGPEQDTSTGKRAP*EGLHKR
Trigger: CCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCC...GGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp GATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTGTCTGGGGGTCCGTGGACCCGGTTaGCACTGTGTCCCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: DPRRNTDRFPRQGWLCLGVRGPG*HCVPSY
Trigger: GTAGCTGGGGACACAGTGTCAACCGGGTCCACGGAC...CCCCAGACAGAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp CATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCTGCCTGAGCCCCTCGCAGGTCAGTaGGCTTGCAGGATGTGCCGT +
Preference number: 4 (lower is better)
Translates to: HGRGSIRGSTPGPPWLPEPLAGQ*ACRMCR
Trigger: ACGGCACATCCTGCAAGCTCACTGACCTGCGAGGGG...CTCAGGCAGCCAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp GCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTTGGGCCGCCTGTACTTaGCCACCGTGCCTGCGATGT +
Preference number: 4 (lower is better)
Translates to: AGRELHGRGSIRGSTPGPWAACT*PPCLRC
Trigger: ACATCGCAGGCACGGTGGTCAAGTACAGGCGGCCCA...AGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp GGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCTGCCTGAGCCCGCGTGTACTCGAAGGTaGTGGAGGGGCTTTTGCCGT +
Preference number: 4 (lower is better)
Translates to: GRGSIRGSTPGPPWLPEPACTRR*WRGFCR
Trigger: ACGGCAAAAGCCCCTCCATCACCTTCGAGTACACGC...GGGCTCAGGCAGCCAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp ACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTACTGGTCCTGGCCTTGTaGGTCCTGTTCCCGGCCGAG +
Preference number: 4 (lower is better)
Translates to: TGRGKSPLDSRGSVPRLLLVLAL*VLFPAE
Trigger: CTCGGCCGGGAACAGGACTCACAAGGCCAGGACCAG...TAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp GGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTGGCGTACGCAGACATaGCCCCTGTGGTGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: GKRAPWEGLHKREHAWASWRTQT*PLWCRW
Trigger: CCACCTGCACCACAGGGGTCATGTCTGCGTACGCCA...GGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp AGCGCCTCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGGGTCTTGGTGCACTCTaGCCAGGGGCTGGTGTACCA +
Preference number: 4 (lower is better)
Translates to: SASARGRKCGGKRAPWEGGLGAL*PGAGVP
Trigger: TGGTACACCAGCCCCTGGTCAGAGTGCACCAAGACC...CCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGAGGCGCT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp CCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGCGTGCCCCGCAGTCCCCTGGTAGCACTTaGCGTCTCGCATCCTCACGC +
Preference number: 4 (lower is better)
Translates to: PLDSRGSVPRLLGQRAPQSPGST*RLASSR
Trigger: GCGTGAGGATGCGAGACGTCAAGTGCTACCAGGGGA...CTGCGGGGCACGCTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp AGCGCCTCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGTCCCCTGGTAGCACTTaGCGTCTCGCATCCTCACGC +
Preference number: 4 (lower is better)
Translates to: SASARGRKCGGKRAPWEGSPGST*RLASSR
Trigger: GCGTGAGGATGCGAGACGTCAAGTGCTACCAGGGGA...CCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGAGGCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp TTCAGAAGGCCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACCTGGGAGGTGGAGGTTaGAGTGAGCCGAGATCTCGC +
Preference number: 4 (lower is better)
Translates to: FRRPCHPERAWATGPEQDLGGGG*SEPRSR
Trigger: GCGAGATCTCGGCTCACTGCAACCTCCACCTCCCAG...GTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGGCCTTCTGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354484.8
CDS-3UTR GCA 90 bp GATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTGTCTGGGGTCGGGGCCCAGCCAGTaGCCAGGCCTCAAGGTTATC +
Preference number: 4 (lower is better)
Translates to: DPRRNTDRFPRQGWLCLGSGPSQ*PGLKVI
Trigger: GATAACCTTGAGGCCTGGGCACTGGCTGGGCCCCGA...CCCCAGACAGAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGGCCGTGGCGTCGGTaGCCCCCTCCAGGCTATTGG +
Preference number: 4 (lower is better)
Translates to: GVESAAGRELHGRGSIRGRPWRR*PPPGYW
Trigger: CCAATAGCCTGGAGGGGGGCACCGACGCCACGGCCT...CCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CACAAACACAGGATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCAGGCCGTGGCGTCGGTaGCCCCCTCCAGGCTATTGG +
Preference number: 4 (lower is better)
Translates to: HKHRIHAGTRTGSHGRGGRPWRR*PPPGYW
Trigger: CCAATAGCCTGGAGGGGGGCACCGACGCCACGGCCT...GCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATCCTGTGTTTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CTCTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGGACTTCCTCCTCTGCTaGAGGCAGTGCCGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LCPRSTKVHGPWEVPSRQDFLLC*RQCRSW
Trigger: CCAGGAGCGGCACTGCCTGCAGCAGAGGAGGAAGTC...CTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCTGCCTGAGACGGACTTCCTCCTCTaGTGCAGGCAGTGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: HGRGSIRGSTPGPPWLPETDFLL*CRQCRS
Trigger: GGAGCGGCACTGCCTGCAGCAGAGGAGGAAGTCCGT...CTCAGGCAGCCAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGGCTTGGACGTGCCCGTaGAGGTCCTGTTCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: GVESAAGRELHGRGSIRGAWTCP*RSCSRG
Trigger: GCCCCGGGAACAGGACCTGCACGGGCACGTCCAAGC...CCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCGGTACCGCTTGGACGTaGCCGTGCAGGTCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: GKRAPWEGLHKREHAWASGTAWT*PCRSCS
Trigger: GGAACAGGACCTGCACGGGCACGTCCAAGCGGTACC...GGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CTCTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGGGTACCGCTTGGACGTaGCCGTGCAGGTCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: LCPRSTKVHGPWEVPSRQGTAWT*PCRSCS
Trigger: GGAACAGGACCTGCACGGGCACGTCCAAGCGGTACC...CTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGCCAGAGGCTTCCACTGGTaGGTCCGCCCGTTGTACACG +
Preference number: 4 (lower is better)
Translates to: LPQEHKGPRAVGSPLSTARGFHW*VRPLYT
Trigger: CGTGTACAACGGGCGGACGCACCAGTGGAAGCCTCT...GGCTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCTGCCTGAGCCCCGTCCCCCTGGCAGATaGCACACTTGTCCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: GRGSIRGSTPGPPWLPEPRPPGR*HTCPVC
Trigger: ACACACTGGACAAGTGTGGCATCTGCCAGGGGGACG...GGGCTCAGGCAGCCAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTTCACGTGGGTGCAGCTaGTACCGTCCCCCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: HGPWEVPSRQPRLSATSLSRGCS*YRPPGR
Trigger: TCTGCCAGGGGGACGGTAGCAGCTGCACCCACGTGA...AAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGCCTCCCCTTGCGATAGTTaGCCGTCACGTGGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: LPQEHKGPRAVGSPLSTASPCDS*PSRGCS
Trigger: GCTGCACCCACGTGACGGGCAACTATCGCAAGGGGA...GGCTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GCCGGAGGCTCTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTGTTGGTGGGCCCCTGTaGCACGATGTACTCGATTCC +
Preference number: 4 (lower is better)
Translates to: AGGSAPGAQRSTGRGKSPVGGPL*HDVLDS
Trigger: GGAATCGAGTACATCGTGGCACAGGGGCCCACCAAC...AGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAGAGCCTCCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGCGTGCCCCGCAGCTCTCGTGTGGCGGCTaGAGCAGCGTGTACTCGAAG +
Preference number: 4 (lower is better)
Translates to: PLDSRGSVPRLLGQRAPQLSCGG*SSVYSK
Trigger: CTTCGAGTACACGCTGCTGCAGCCGCCACACGAGAG...CTGCGGGGCACGCTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCCCTTGGGGCGCCCTGTaGAAAGATGCTGTTCACAGT +
Preference number: 4 (lower is better)
Translates to: PCHPERAWATGPEQDTSTPWGAL*KDAVHS
Trigger: ACTGTGAACAGCATCTTTGCACAGGGCGCCCCAAGG...GGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGCCTGGCAACCCTGTCGCTaGTCAGCTCCAGGTAGGACC +
Preference number: 4 (lower is better)
Translates to: LPQEHKGPRAVGSPLSTAWQPCR*SAPGRT
Trigger: GGTCCTACCTGGAGCTGAGCAGCGACAGGGTTGCCA...GGCTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCTGCCTGAGTGGTGCAGGTGGCACTaGAGGGCTCGTGGGACGAGA +
Preference number: 4 (lower is better)
Translates to: HGRGSIRGSTPGPPWLPEWCRWH*RARGTR
Trigger: TCTCGTCCCACGAGCCCTGCAGTGCCACCTGCACCA...CTCAGGCAGCCAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGCCGCACGGCCTCGGCTaGCTCGCACAGGTCGCTGTA +
Preference number: 4 (lower is better)
Translates to: RGRKCGGKRAPWEGLHKRPHGLG*LAQVAV
Trigger: TACAGCGACCTGTGCGAGGCAGCCGAGGCCGTGCGG...CCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp TTCAGAAGGCCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACCCCCACACTTGGCAGTaGACTCGGACCACTCCGACA +
Preference number: 4 (lower is better)
Translates to: FRRPCHPERAWATGPEQDPHTWQ*TRTTPT
Trigger: TGTCGGAGTGGTCCGAGTGCACTGCCAAGTGTGGGG...GTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGGCCTTCTGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGCGTGCCCCGCAGCCCCACACTTGGCAGTaGACTCGGACCACTCCGACA +
Preference number: 4 (lower is better)
Translates to: PLDSRGSVPRLLGQRAPQPHTWQ*TRTTPT
Trigger: TGTCGGAGTGGTCCGAGTGCACTGCCAAGTGTGGGG...CTGCGGGGCACGCTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTGTCTGGGGCACAGGGCGGGCCCGTaGAGTTCTTCTCCCCTACAG +
Preference number: 4 (lower is better)
Translates to: DPRRNTDRFPRQGWLCLGHRAGP*SSSPLQ
Trigger: CTGTAGGGGAGAAGAACTGCACGGGCCCGCCCTGTG...CCCCAGACAGAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp TGGGCAAGCGCCTCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGCTGATGGTGCGGCCTTaGCCGCAGCTTCCACTGCAC +
Preference number: 4 (lower is better)
Translates to: WASASARGRKCGGKRAPWLMVRP*PQLPLH
Trigger: GTGCAGTGGAAGCTGCGGGCAAGGCCGCACCATCAG...CCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGAGGCGCTTGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CAGAAGGCCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACACGCCTCTCGAAACACGTaGTCTCCTCGGGAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: QKALPPREGVGYGPGARHASRNT*SPREAS
Trigger: AGAAGCCTCCCGAGGAGAGCACGTGTTTCGAGAGGC...GTGTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGGCCTTCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCAGCGGCAGCACGCCTTaGTGTAGTACCAGTGCCCGC +
Preference number: 4 (lower is better)
Translates to: GKRAPWEGLHKREHAWASSGSTP*CSTSAR
Trigger: GCGGGCACTGGTACTACAGCAAGGCGTGCTGCCGCT...GGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCTGCCTGAGAGCGGCAGCACGCCTTaGTGTAGTACCAGTGCCCGC +
Preference number: 4 (lower is better)
Translates to: HGRGSIRGSTPGPPWLPESGSTP*CSTSAR
Trigger: GCGGGCACTGGTACTACAGCAAGGCGTGCTGCCGCT...CTCAGGCAGCCAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp ACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGGTGCCGGAGGCTCTaGCCCAGGAGCACAAAGGTC +
Preference number: 4 (lower is better)
Translates to: TGRGKSPLDSRGSVPRLLGCRRL*PRSTKV
Trigger: GACCTTTGTGCTCCTGGGGCAGAGCCTCCGGCACCC...TAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGGGGTGCCGGAGGCTCTaGCCCAGGAGCACAAAGGTC +
Preference number: 4 (lower is better)
Translates to: RGKSPLDSRGSVPRLLGQGCRRL*PRSTKV
Trigger: GACCTTTGTGCTCCTGGGGCAGAGCCTCCGGCACCC...CTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CTCTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGTCCTTCAGAAGGCCCTaGCACCCAGAGAGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: LCPRSTKVHGPWEVPSRQSFRRP*HPERAW
Trigger: CCACGCCCTCTCTGGGTGGCAGGGCCTTCTGAAGGA...CTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGCTGGGCCTCCTTGGCTaGCTGAGCCCCTCTCACCCC +
Preference number: 4 (lower is better)
Translates to: RGRKCGGKRAPWEGLHKRLGLLG*LSPSHP
Trigger: GGGGTGAGAGGGGCTCAGGCAGCCAAGGAGGCCCAG...CCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCACTTTAACCCGCTCTaGGCCTCTGGAGCCCGGCCA +
Preference number: 4 (lower is better)
Translates to: AGRELHGRGSIRGSTPGPHFNPL*ASGARP
Trigger: TGGCCGGGCTCCAGAGGCGCAGAGCGGGTTAAAGTG...AGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393061.7
CDS-3UTR CCA 90 bp AAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGAGGCAGTGCCGCTCCTaGGATGTCACCCCACCCCCG +
Preference number: 4 (lower is better)
Translates to: KRAPWEGLHKREHAWASLRQCRS*DVTPPP
Trigger: CGGGGGTGGGGTGACATCCCAGGAGCGGCACTGCCT...CAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CTCTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGAGAGCTGGTACCGCTTaGACGTGCCCGTGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: LCPRSTKVHGPWEVPSRQRAGTA*TCPCRS
Trigger: GGACCTGCACGGGCACGTCCAAGCGGTACCAGCTCT...CTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTAGAGCTGGTACCGCTTaGACGTGCCCGTGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: AGRELHGRGSIRGSTPGPRAGTA*TCPCRS
Trigger: GGACCTGCACGGGCACGTCCAAGCGGTACCAGCTCT...AGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGCCTGCACTCTGCAGAGCTaGTACCGCTTGGACGTGCCC +
Preference number: 4 (lower is better)
Translates to: LPQEHKGPRAVGSPLSTACTLQS*YRLDVP
Trigger: GGGCACGTCCAAGCGGTACCAGCTCTGCAGAGTGCA...GGCTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGCGTGCCCCTGCACTCTGCAGAGCTaGTACCGCTTGGACGTGCCC +
Preference number: 4 (lower is better)
Translates to: VPSRQPRLSATSLRPACPCTLQS*YRLDVP
Trigger: GGGCACGTCCAAGCGGTACCAGCTCTGCAGAGTGCA...GGGGCACGCTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTGTCTGGGGGAGGTGCACTCTGCAGAGCTaGTACCGCTTGGACGTGCCC +
Preference number: 4 (lower is better)
Translates to: HAGTRTGSHGRGGSVWGRCTLQS*YRLDVP
Trigger: GGGCACGTCCAAGCGGTACCAGCTCTGCAGAGTGCA...CCTCCCCCAGACAGAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CAGAAGGCCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACACCGCCCGTTGTACACGTaGGAGTTGAAGGAGACGCAC +
Preference number: 4 (lower is better)
Translates to: QKALPPREGVGYGPGARHRPLYT*ELKETH
Trigger: GTGCGTCTCCTTCAACTCCCACGTGTACAACGGGCG...GTGTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGGCCTTCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp TGGGCAAGCGCCTCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGCTGGCCGTCCACGGTaGTACAGTGCAGGTCACACG +
Preference number: 4 (lower is better)
Translates to: WASASARGRKCGGKRAPWAGRPR*YSAGHT
Trigger: CGTGTGACCTGCACTGTACCACCGTGGACGGCCAGC...CCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGAGGCGCTTGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTGCTGGCCGTCCACGGTaGTACAGTGCAGGTCACACG +
Preference number: 4 (lower is better)
Translates to: HGPWEVPSRQPRLSATSLAGRPR*YSAGHT
Trigger: CGTGTGACCTGCACTGTACCACCGTGGACGGCCAGC...AAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCTGCCTGAGACCATGAGCTGCCGCTaGCCGTCCACGGTGGTACAG +
Preference number: 4 (lower is better)
Translates to: HGRGSIRGSTPGPPWLPETMSCR*PSTVVQ
Trigger: CTGTACCACCGTGGACGGCCAGCGGCAGCTCATGGT...CTCAGGCAGCCAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCACCATGAGCTGCCGCTaGCCGTCCACGGTGGTACAG +
Preference number: 4 (lower is better)
Translates to: GKRAPWEGLHKREHAWASTMSCR*PSTVVQ
Trigger: CTGTACCACCGTGGACGGCCAGCGGCAGCTCATGGT...GGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CTCTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGTCAGGCCCTGGTTGGTaGGCCCCTGTGCCACGATGT +
Preference number: 4 (lower is better)
Translates to: LCPRSTKVHGPWEVPSRQSGPGW*APVPRC
Trigger: ACATCGTGGCACAGGGGCCCACCAACCAGGGCCTGA...CTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTGTCTGGGGTCAGGCCCTGGTTGGTaGGCCCCTGTGCCACGATGT +
Preference number: 4 (lower is better)
Translates to: DPRRNTDRFPRQGWLCLGSGPGW*APVPRC
Trigger: ACATCGTGGCACAGGGGCCCACCAACCAGGGCCTGA...CCCCAGACAGAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTGTCTGGGGCATTCAGGCCCTGGTTaGTGGGCCCCTGTGCCACGA +
Preference number: 4 (lower is better)
Translates to: DPRRNTDRFPRQGWLCLGHSGPG*WAPVPR
Trigger: TCGTGGCACAGGGGCCCACCAACCAGGGCCTGAATG...CCCCAGACAGAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGCCATGACATTCAGGCCCTaGTTGGTGGGCCCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: LPQEHKGPRAVGSPLSTAMTFRP*LVGPCA
Trigger: GGCACAGGGGCCCACCAACCAGGGCCTGAATGTCAT...GGCTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGGGGCGGCTCTCGTGTaGCGGCTGCAGCAGCGTGTA +
Preference number: 4 (lower is better)
Translates to: RGRKCGGKRAPWEGLHKRGAALV*RLQQRV
Trigger: TACACGCTGCTGCAGCCGCCACACGAGAGCCGCCCC...CCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GCCGGAGGCTCTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTAGAAGCCATAGTAGATaGGCTGGGGGCGGCTCTCGT +
Preference number: 4 (lower is better)
Translates to: AGGSAPGAQRSTGRGKSPRSHSR*AGGGSR
Trigger: ACGAGAGCCGCCCCCAGCCCATCTACTATGGCTTCT...AGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAGAGCCTCCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp TCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATATGTCCAGGCCCGGGTaGCCGAACAGCCGGTTGTCC +
Preference number: 4 (lower is better)
Translates to: SARGRKCGGKRAPWEGLHMSRPG*PNSRLS
Trigger: GGACAACCGGCTGTTCGGCCACCCGGGCCTGGACAT...ATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGGCTCGCACACCTCGTTaGTCTCCTGGCCCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: RGKSPLDSRGSVPRLLGQARTPR*SPGPGW
Trigger: CCAGCCAGGGCCAGGAGACCAACGAGGTGTGCGAGC...CTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCTGCCTGAGGGCCAGGGAGCTCCTTaGGGCGCCCTGTGCAAAGAT +
Preference number: 4 (lower is better)
Translates to: HGRGSIRGSTPGPPWLPEGQGAP*GALCKD
Trigger: ATCTTTGCACAGGGCGCCCCAAGGAGCTCCCTGGCC...CTCAGGCAGCCAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp TTCAGAAGGCCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACCCTCGGAGGAGCTGTTaGCAACCCTGTCGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: FRRPCHPERAWATGPEQDPRRSC*QPCRCS
Trigger: TGAGCAGCGACAGGGTTGCCAACAGCTCCTCCGAGG...GTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGGCCTTCTGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp AGCGCCTCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCCTTGGGCCTGGTCCTaGCCTTGTGAGTCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: SASARGRKCGGKRAPWEGPWAWS*PCESCS
Trigger: GGAACAGGACTCACAAGGCCAGGACCAGGCCCAAGG...CCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGAGGCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp TGGGCAAGCGCCTCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGCTTGCTTGCGCGCCTTaGGCCTGGTCCTGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: WASASARGRKCGGKRAPWLACAP*AWSWPC
Trigger: ACAAGGCCAGGACCAGGCCCAAGGCGCGCAAGCAAG...CCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGAGGCGCTTGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTGTCTGGGGCTTGCTTGCGCGCCTTaGGCCTGGTCCTGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: DPRRNTDRFPRQGWLCLGLACAP*AWSWPC
Trigger: ACAAGGCCAGGACCAGGCCCAAGGCGCGCAAGCAAG...CCCCAGACAGAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCTTGCTTGCGCGCCTTaGGCCTGGTCCTGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: AGRELHGRGSIRGSTPGPLACAP*AWSWPC
Trigger: ACAAGGCCAGGACCAGGCCCAAGGCGCGCAAGCAAG...AGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp TCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATCCAGCGCAGAACTCGTaGACAGGCTCGGGACGGGTC +
Preference number: 4 (lower is better)
Translates to: SARGRKCGGKRAPWEGLHPAQNS*TGSGRV
Trigger: GACCCGTCCCGAGCCTGTCCACGAGTTCTGCGCTGG...ATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CAAACACAGGATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCGTCTCCCACCTGGGCTaGCACTCCCTCCCAGCGCAG +
Preference number: 4 (lower is better)
Translates to: QTQDPRRNTDRFPRQGWLVSHLG*HSLPAQ
Trigger: CTGCGCTGGGAGGGAGTGCCAGCCCAGGTGGGAGAC...GAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATCCTGTGTTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp AAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGTCTCCCACCTGGGCTaGCACTCCCTCCCAGCGCAG +
Preference number: 4 (lower is better)
Translates to: KRAPWEGLHKREHAWASLVSHLG*HSLPAQ
Trigger: CTGCGCTGGGAGGGAGTGCCAGCCCAGGTGGGAGAC...CAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGTGCTCGTCTCCCACCTaGGCTGGCACTCCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: RGKSPLDSRGSVPRLLGQCSSPT*AGTPSQ
Trigger: CTGGGAGGGAGTGCCAGCCCAGGTGGGAGACGAGCA...CTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CTCTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGAGCAGCGGATGTCCCTaGTCACCACACTGCGCTCCC +
Preference number: 4 (lower is better)
Translates to: LCPRSTKVHGPWEVPSRQSSGCP*SPHCAP
Trigger: GGGAGCGCAGTGTGGTGACCAGGGACATCCGCTGCT...CTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCAGCAGCGGATGTCCCTaGTCACCACACTGCGCTCCC +
Preference number: 4 (lower is better)
Translates to: GKRAPWEGLHKREHAWASSSGCP*SPHCAP
Trigger: GGGAGCGCAGTGTGGTGACCAGGGACATCCGCTGCT...GGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGCGTGCCCCCTACCCGTCCGTCGCTaGTCTTGCAGTACACGTGCC +
Preference number: 4 (lower is better)
Translates to: VPSRQPRLSATSLRPACPLPVRR*SCSTRA
Trigger: GGCACGTGTACTGCAAGACCAGCGACGGACGGGTAG...GGGGCACGCTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTGTCTGGGGGAGGTCCTGGGCCAGCCAGTaGGCGGGACAGTTTTTGTCC +
Preference number: 4 (lower is better)
Translates to: HAGTRTGSHGRGGSVWGRSWASQ*AGQFLS
Trigger: GGACAAAAACTGTCCCGCCCACTGGCTGGCCCAGGA...CCTCCCCCAGACAGAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp TCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATCCACCCCGCAGGTCTTaGTGCACTCTGACCAGGGGC +
Preference number: 4 (lower is better)
Translates to: SARGRKCGGKRAPWEGLHPPRRS*CTLTRG
Trigger: GCCCCTGGTCAGAGTGCACCAAGACCTGCGGGGTGG...ATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp AAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGCTGGCAGCTGTCATCTaGGGGCTCCGTGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: KRAPWEGLHKREHAWASLLAAVI*GLRGAG
Trigger: CCCTGCCCCACGGAGCCCCCAGATGACAGCTGCCAG...CAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp TCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATGTGCCTGGCTGGTCCTaGCAGCTGTCATCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: SARGRKCGGKRAPWEGLHVPGWS*QLSSGG
Trigger: GCCCCCAGATGACAGCTGCCAGGACCAGCCAGGCAC...ATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCTGCCTGAGGGCACAGTTGGTGCCTaGCTGGTCCTGGCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: HGRGSIRGSTPGPPWLPEGTVGA*LVLAAV
Trigger: GACAGCTGCCAGGACCAGCCAGGCACCAACTGTGCC...CTCAGGCAGCCAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGTGGCCAGGGCACAGTTaGTGCCTGGCTGGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: RGKSPLDSRGSVPRLLGQWPGHS*CLAGPG
Trigger: GCCAGGACCAGCCAGGCACCAACTGTGCCCTGGCCA...CTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp AGCGCCTCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCGCTTGGTCTTCATCTaGAAGGGGCTGCAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: SASARGRKCGGKRAPWEGRLVFI*KGLQLP
Trigger: CGGCAGCTGCAGCCCCTTCCAGATGAAGACCAAGCG...CCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGAGGCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCCAGGAGGGGCGCTTaGTCTTCATCTGGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: AGRELHGRGSIRGSTPGPPRRGA*SSSGRG
Trigger: GCCCCTTCCAGATGAAGACCAAGCGCCCCTCCTGGG...AGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTGTCTGGGGCCCAGGAGGGGCGCTTaGTCTTCATCTGGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: DPRRNTDRFPRQGWLCLGPRRGA*SSSGRG
Trigger: GCCCCTTCCAGATGAAGACCAAGCGCCCCTCCTGGG...CCCCAGACAGAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CAAACACAGGATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCAGGGGTGGCTCTGTCTaGGGGAGGCCACTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: QTQDPRRNTDRFPRQGWLRGGSV*GRPLGA
Trigger: GGCACCCAGTGGCCTCCCCCAGACAGAGCCACCCCT...GAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATCCTGTGTTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CACAAACACAGGATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCCCCAAACGTCCCGTaGGCAAGCGCCTCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: HKHRIHAGTRTGSHGRGGSPNVP*ASASAR
Trigger: CCGGGCAGAGGCGCTTGCCCACGGGACGTTTGGGGA...GCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATCCTGTGTTTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGTCCCCAAACGTCCCGTaGGCAAGCGCCTCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: GVESAAGRELHGRGSIRGSPNVP*ASASAR
Trigger: CCGGGCAGAGGCGCTTGCCCACGGGACGTTTGGGGA...CCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CACAAACACAGGATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCGGTTACCGGGGAGGCTaGCGGTGGCAAAGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: HKHRIHAGTRTGSHGRGGGYRGG*RWQSPS
Trigger: GCTGGGGCTTTGCCACCGCCAGCCTCCCCGGTAACC...GCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATCCTGTGTTTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393061.7
CDS-3UTR TCA 90 bp TCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATTGGGCCGCCTGTACTTaGCCACCGTGCCTGCGATGT +
Preference number: 4 (lower is better)
Translates to: SARGRKCGGKRAPWEGLHWAACT*PPCLRC
Trigger: ACATCGCAGGCACGGTGGTCAAGTACAGGCGGCCCA...ATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp GGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCTGCCTGAGCCCTCTGGTTCCACACCATaGCATTCAGGCCCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: GRGSIRGSTPGPPWLPEPSGSTP*HSGPGW
Trigger: CCAACCAGGGCCTGAATGTCATGGTGTGGAACCAGA...GGGCTCAGGCAGCCAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp CTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGCGTGTACTCGAAGGTaGTGGAGGGGCTTTTGCCGT +
Preference number: 4 (lower is better)
Translates to: LPQEHKGPRAVGSPLSTAACTRR*WRGFCR
Trigger: ACGGCAAAAGCCCCTCCATCACCTTCGAGTACACGC...GGCTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp AAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGCCAGGTAGGACCCGTTaGGCAGGTAAGGGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: KRAPWEGLHKREHAWASLPGRTR*AGKGQP
Trigger: GGGCTGGCCCTTACCTGCTCAACGGGTCCTACCTGG...CAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp AGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCGGTCTTGGTGCACTCTaGCCAGGGGCTGGTGTACCA +
Preference number: 4 (lower is better)
Translates to: RSTKVHGPWEVPSRQPRLGLGAL*PGAGVP
Trigger: TGGTACACCAGCCCCTGGTCAGAGTGCACCAAGACC...GAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp GTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGCGTGCCCCCGCAGAGGTTCACTTTaGTGGCCAGGGCACAGTTGG +
Preference number: 4 (lower is better)
Translates to: VPSRQPRLSATSLRPACPRRGSL*WPGHSW
Trigger: CCAACTGTGCCCTGGCCATCAAAGTGAACCTCTGCG...GGGGCACGCTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp TGGGCAAGCGCCTCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGTGTCCCTGGGGCTCCTaGGAATGGGGTCTGGGATGT +
Preference number: 4 (lower is better)
Translates to: WASASARGRKCGGKRAPWCPWGS*EWGLGC
Trigger: ACATCCCAGACCCCATTCTCAGGAGCCCCAGGGACA...CCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGAGGCGCTTGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393061.7
CDS-3UTR GCA 90 bp CGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGGCCGTATGGCCCTGGTaGTGGAGACACCACCTGCCT +
Preference number: 4 (lower is better)
Translates to: RGKSPLDSRGSVPRLLGQAVWPW*WRHHLP
Trigger: AGGCAGGTGGTGTCTCCAGCACCAGGGCCATACGGC...CTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354484.8
CDS-3UTR GCA 90 bp TCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATGACTTCCTCCTCTGCTaGAGGCAGTGCCGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: SARGRKCGGKRAPWEGLHDFLLC*RQCRSW
Trigger: CCAGGAGCGGCACTGCCTGCAGCAGAGGAGGAAGTC...ATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CAGAAGGCCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACACTCCACGGTGGTACAGTaGAGGTCACACGGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: QKALPPREGVGYGPGARHSTVVQ*RSHGLL
Trigger: CAGCAAACCGTGTGACCTGCACTGTACCACCGTGGA...GTGTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGGCCTTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp ACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTATCACGTGGGTGCAGCTaGTACCGTCCCCCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: TGRGKSPLDSRGSVPRLLSRGCS*YRPPGR
Trigger: TCTGCCAGGGGGACGGTAGCAGCTGCACCCACGTGA...TAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCTGCCTGAGTCCCCTTGCGATAGTTaGCCGTCACGTGGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: HGRGSIRGSTPGPPWLPESPCDS*PSRGCS
Trigger: GCTGCACCCACGTGACGGGCAACTATCGCAAGGGGA...CTCAGGCAGCCAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTGTCTGGGGTCCCCTTGCGATAGTTaGCCGTCACGTGGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: DPRRNTDRFPRQGWLCLGSPCDS*PSRGCS
Trigger: GCTGCACCCACGTGACGGGCAACTATCGCAAGGGGA...CCCCAGACAGAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGCGTGCCCCGGTGGGCATTCCCCTTaGGATAGTTGCCCGTCACGT +
Preference number: 4 (lower is better)
Translates to: VPSRQPRLSATSLRPACPGGHSP*DSCPSR
Trigger: ACGTGACGGGCAACTATCGCAAGGGGAATGCCCACC...GGGGCACGCTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp TTCAGAAGGCCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACGGTGGGCATTCCCCTTaGGATAGTTGCCCGTCACGT +
Preference number: 4 (lower is better)
Translates to: FRRPCHPERAWATGPEQDGGHSP*DSCPSR
Trigger: ACGTGACGGGCAACTATCGCAAGGGGAATGCCCACC...GTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGGCCTTCTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGCGTGCCCCGCAGGTTGGTGGGCCCCTGTaGCACGATGTACTCGATTCC +
Preference number: 4 (lower is better)
Translates to: PLDSRGSVPRLLGQRAPQVGGPL*HDVLDS
Trigger: GGAATCGAGTACATCGTGGCACAGGGGCCCACCAAC...CTGCGGGGCACGCTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCTCTCGTGTGGCGGCTaGAGCAGCGTGTACTCGAAG +
Preference number: 4 (lower is better)
Translates to: GRGKSPLDSRGSVPRLLGLSCGG*SSVYSK
Trigger: CTTCGAGTACACGCTGCTGCAGCCGCCACACGAGAG...GCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GCCGGAGGCTCTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCCTTGGGGCGCCCTGTaGAAAGATGCTGTTCACAGT +
Preference number: 4 (lower is better)
Translates to: AGGSAPGAQRSTGRGKSPPWGAL*KDAVHS
Trigger: ACTGTGAACAGCATCTTTGCACAGGGCGCCCCAAGG...AGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAGAGCCTCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTGGCAACCCTGTCGCTaGTCAGCTCCAGGTAGGACC +
Preference number: 4 (lower is better)
Translates to: GKRAPWEGLHKREHAWASWQPCR*SAPGRT
Trigger: GGTCCTACCTGGAGCTGAGCAGCGACAGGGTTGCCA...GGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTTGGCAACCCTGTCGCTaGTCAGCTCCAGGTAGGACC +
Preference number: 4 (lower is better)
Translates to: HGPWEVPSRQPRLSATSLWQPCR*SAPGRT
Trigger: GGTCCTACCTGGAGCTGAGCAGCGACAGGGTTGCCA...AAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp AAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGACTCACGCCTTGCTTaGGCGCCTTGGGCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: KRAPWEGLHKREHAWASLDSRLA*APWAWS
Trigger: GGACCAGGCCCAAGGCGCGCAAGCAAGGCGTGAGTC...CAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp TCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATTGGTGCAGGTGGCACTaGAGGGCTCGTGGGACGAGA +
Preference number: 4 (lower is better)
Translates to: SARGRKCGGKRAPWEGLHWCRWH*RARGTR
Trigger: TCTCGTCCCACGAGCCCTGCAGTGCCACCTGCACCA...ATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAACACTCGCTCCAGCTaGTCGTCTCCCACCTGGGCT +
Preference number: 4 (lower is better)
Translates to: HGPWEVPSRQPRLSATSLNTRSS*SSPTWA
Trigger: AGCCCAGGTGGGAGACGAGCAGCTGGAGCGAGTGTT...AAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCCCTCTCCGCAGGTaGGCGAACACTCGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GVESAAGRELHGRGSIRGSPLRR*ANTRSS
Trigger: GCTGGAGCGAGTGTTCGCGCACCTGCGGAGAGGGCT...CCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGCTGATGGTGCGGCCTTaGCCGCAGCTTCCACTGCAC +
Preference number: 4 (lower is better)
Translates to: RGKSPLDSRGSVPRLLGQLMVRP*PQLPLH
Trigger: GTGCAGTGGAAGCTGCGGGCAAGGCCGCACCATCAG...CTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp TTCAGAAGGCCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACGTCTTGCAGTACACGTaGCTGATGGTGCGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: FRRPCHPERAWATGPEQDVLQYT*LMVRPC
Trigger: GCAAGGCCGCACCATCAGGCACGTGTACTGCAAGAC...GTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGGCCTTCTGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCGTTGGCCAGCTCCATaGAGAGCACCAGCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: AGRELHGRGSIRGSTPGPRWPAP*RAPAAS
Trigger: AGAAGCGGCTGGTGCTCTGCATGGAGCTGGCCAACG...AGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGCGTGCCCCGCAGGCCTCTCGAAACACGTaGTCTCCTCGGGAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: PLDSRGSVPRLLGQRAPQASRNT*SPREAS
Trigger: AGAAGCCTCCCGAGGAGAGCACGTGTTTCGAGAGGC...CTGCGGGGCACGCTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTGTCTGGGGGAGGGATCACAGGCCTGTCTaGCAACGGGCTTCACCAACG +
Preference number: 4 (lower is better)
Translates to: HAGTRTGSHGRGGSVWGRDHRPV*QRASPT
Trigger: CGTTGGTGAAGCCCGTTGGCAGACAGGCCTGTGATC...CCTCCCCCAGACAGAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGGGGTGCCGGAGGCTCTaGCCCAGGAGCACAAAGGTC +
Preference number: 4 (lower is better)
Translates to: GVESAAGRELHGRGSIRGGCRRL*PRSTKV
Trigger: GACCTTTGTGCTCCTGGGGCAGAGCCTCCGGCACCC...CCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp ACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTATCCTTCAGAAGGCCCTaGCACCCAGAGAGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: TGRGKSPLDSRGSVPRLLSFRRP*HPERAW
Trigger: CCACGCCCTCTCTGGGTGGCAGGGCCTTCTGAAGGA...TAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCTGCCTGAGCCCCACGTTGGGCTCGCCTaGAAGTTTCCTTCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: GRGSIRGSTPGPPWLPEPHVGLA*KFPSEG
Trigger: GCCTTCTGAAGGAAACTTGCAGGCGAGCCCAACGTG...GGGCTCAGGCAGCCAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GCCGGAGGCTCTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTTTGGGCTGTTGTCCGTaGACCCGGTTGACACTGTGT +
Preference number: 4 (lower is better)
Translates to: AGGSAPGAQRSTGRGKSPLGCCP*TRLTLC
Trigger: ACACAGTGTCAACCGGGTCCACGGACAACAGCCCAA...AGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAGAGCCTCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CAGAAGGCCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACACTTGGGCTGTTGTCCGTaGACCCGGTTGACACTGTGT +
Preference number: 4 (lower is better)
Translates to: QKALPPREGVGYGPGARHLGCCP*TRLTLC
Trigger: ACACAGTGTCAACCGGGTCCACGGACAACAGCCCAA...GTGTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGGCCTTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp TTCAGAAGGCCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACCCCCCTCCAGGCTATTaGATGTTGGGCTGTTGTCCG +
Preference number: 4 (lower is better)
Translates to: FRRPCHPERAWATGPEQDPPPGY*MLGCCP
Trigger: CGGACAACAGCCCAACATCCAATAGCCTGGAGGGGG...GTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGGCCTTCTGAA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp TCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAGAGCTGGTACCGCTTaGACGTGCCCGTGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: SARGRKCGGKRAPWEGLHRAGTA*TCPCRS
Trigger: GGACCTGCACGGGCACGTCCAAGCGGTACCAGCTCT...ATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp ACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGCTGGCCGTCCACGGTaGTACAGTGCAGGTCACACG +
Preference number: 4 (lower is better)
Translates to: TGRGKSPLDSRGSVPRLLAGRPR*YSAGHT
Trigger: CGTGTGACCTGCACTGTACCACCGTGGACGGCCAGC...TAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp AGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCCTGCTACCGTCCCCCTaGCAGATGCCACACTTGTCC +
Preference number: 4 (lower is better)
Translates to: RSTKVHGPWEVPSRQPRLLLPSP*QMPHLS
Trigger: GGACAAGTGTGGCATCTGCCAGGGGGACGGTAGCAG...GAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTCTGCTACCGTCCCCCTaGCAGATGCCACACTTGTCC +
Preference number: 4 (lower is better)
Translates to: HGPWEVPSRQPRLSATSLLLPSP*QMPHLS
Trigger: GGACAAGTGTGGCATCTGCCAGGGGGACGGTAGCAG...AAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCTTCCTCTCTACAATCTaGATGTCTCGGGCACCAGCC +
Preference number: 4 (lower is better)
Translates to: PCHPERAWATGPEQDTSTFLSTI*MSRAPA
Trigger: GGCTGGTGCCCGAGACATCCAGATTGTAGAGAGGAA...GGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTATGACATTCAGGCCCTaGTTGGTGGGCCCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: HGPWEVPSRQPRLSATSLMTFRP*LVGPCA
Trigger: GGCACAGGGGCCCACCAACCAGGGCCTGAATGTCAT...AAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCATGACATTCAGGCCCTaGTTGGTGGGCCCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: GRGKSPLDSRGSVPRLLGMTFRP*LVGPCA
Trigger: GGCACAGGGGCCCACCAACCAGGGCCTGAATGTCAT...GCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGCTGGCTGTGGGCCCTGGGGCTTTTGCCGTTCTaGTTCCACACCATGACATTC +
Preference number: 4 (lower is better)
Translates to: GVGYGPGARHLHRWLWALGLLPF*FHTMTF
Trigger: GAATGTCATGGTGTGGAACCAGAACGGCAAAAGCCC...CAGGGCCCACAGCCAGCGGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTGTCTGGGGGAGGAGAAGCCATAGTAGATaGGCTGGGGGCGGCTCTCGT +
Preference number: 4 (lower is better)
Translates to: HAGTRTGSHGRGGSVWGRRSHSR*AGGGSR
Trigger: ACGAGAGCCGCCCCCAGCCCATCTACTATGGCTTCT...CCTCCCCCAGACAGAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGATGTCCAGGCCCGGGTaGCCGAACAGCCGGTTGTCC +
Preference number: 4 (lower is better)
Translates to: RGRKCGGKRAPWEGLHKRMSRPG*PNSRLS
Trigger: GGACAACCGGCTGTTCGGCCACCCGGGCCTGGACAT...CCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp AAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGTCTCCTGGCCCTGGCTaGGGCCCAGCTCCATGTCCA +
Preference number: 4 (lower is better)
Translates to: KRAPWEGLHKREHAWASLSPGPG*GPAPCP
Trigger: TGGACATGGAGCTGGGCCCCAGCCAGGGCCAGGAGA...CAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGTCTCCTGGCCCTGGCTaGGGCCCAGCTCCATGTCCA +
Preference number: 4 (lower is better)
Translates to: GVESAAGRELHGRGSIRGSPGPG*GPAPCP
Trigger: TGGACATGGAGCTGGGCCCCAGCCAGGGCCAGGAGA...CCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CACAAACACAGGATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCGCTCGCACACCTCGTTaGTCTCCTGGCCCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: HKHRIHAGTRTGSHGRGGARTPR*SPGPGW
Trigger: CCAGCCAGGGCCAGGAGACCAACGAGGTGTGCGAGC...GCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATCCTGTGTTTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGCCGAGAAGAACTCCTaGGAGGCGAAGTGGGTGTCA +
Preference number: 4 (lower is better)
Translates to: LPQEHKGPRAVGSPLSTAAEKNS*EAKWVS
Trigger: TGACACCCACTTCGCCTCCCAGGAGTTCTTCTCGGC...GGCTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp TCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATGGCCAGGGAGCTCCTTaGGGCGCCCTGTGCAAAGAT +
Preference number: 4 (lower is better)
Translates to: SARGRKCGGKRAPWEGLHGQGAP*GALCKD
Trigger: ATCTTTGCACAGGGCGCCCCAAGGAGCTCCCTGGCC...ATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTCGGAGGAGCTGTTaGCAACCCTGTCGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: AGRELHGRGSIRGSTPGPPRRSC*QPCRCS
Trigger: TGAGCAGCGACAGGGTTGCCAACAGCTCCTCCGAGG...AGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCCCTCGGAGGAGCTGTTaGCAACCCTGTCGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: GKRAPWEGLHKREHAWASPRRSC*QPCRCS
Trigger: TGAGCAGCGACAGGGTTGCCAACAGCTCCTCCGAGG...GGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCCCTTGGGCCTGGTCCTaGCCTTGTGAGTCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: GKRAPWEGLHKREHAWASPWAWS*PCESCS
Trigger: GGAACAGGACTCACAAGGCCAGGACCAGGCCCAAGG...GGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGTGCGCGCCTTGGGCCTaGTCCTGGCCTTGTGAGTCC +
Preference number: 4 (lower is better)
Translates to: RGRKCGGKRAPWEGLHKRCAPWA*SWPCES
Trigger: GGACTCACAAGGCCAGGACCAGGCCCAAGGCGCGCA...CCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGCCAGCGCAGAACTCGTaGACAGGCTCGGGACGGGTC +
Preference number: 4 (lower is better)
Translates to: RGRKCGGKRAPWEGLHKRPAQNS*TGSGRV
Trigger: GACCCGTCCCGAGCCTGTCCACGAGTTCTGCGCTGG...CCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CAAACACAGGATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTGCTCGTCTCCCACCTaGGCTGGCACTCCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: QTQDPRRNTDRFPRQGWLCSSPT*AGTPSQ
Trigger: CTGGGAGGGAGTGCCAGCCCAGGTGGGAGACGAGCA...GAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATCCTGTGTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CTCTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGTGCGCTCCCCACACTTaGCAGTGCACTCGGACCACT +
Preference number: 4 (lower is better)
Translates to: LCPRSTKVHGPWEVPSRQCAPHT*QCTRTT
Trigger: AGTGGTCCGAGTGCACTGCCAAGTGTGGGGAGCGCA...CTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CAGAAGGCCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACACGGCTTGGTCTCCATCTaGCACTGGGACTCAGGTACT +
Preference number: 4 (lower is better)
Translates to: QKALPPREGVGYGPGARHGLVSI*HWDSGT
Trigger: AGTACCTGAGTCCCAGTGCCAGATGGAGACCAAGCC...GTGTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGGCCTTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTGGATGGCCAGAGGCTTaGTCTCCATCTGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: AGRELHGRGSIRGSTPGPGWPEA*SPSGTG
Trigger: CCCAGTGCCAGATGGAGACCAAGCCTCTGGCCATCC...AGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp AGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCGGATGGCCAGAGGCTTaGTCTCCATCTGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: RSTKVHGPWEVPSRQPRLGWPEA*SPSGTG
Trigger: CCCAGTGCCAGATGGAGACCAAGCCTCTGGCCATCC...GAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTCCTGGGCCAGCCAGTaGGCGGGACAGTTTTTGTCC +
Preference number: 4 (lower is better)
Translates to: GKRAPWEGLHKREHAWASSWASQ*AGQFLS
Trigger: GGACAAAAACTGTCCCGCCCACTGGCTGGCCCAGGA...GGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CTCTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGTCCTGGGCCAGCCAGTaGGCGGGACAGTTTTTGTCC +
Preference number: 4 (lower is better)
Translates to: LCPRSTKVHGPWEVPSRQSWASQ*AGQFLS
Trigger: GGACAAAAACTGTCCCGCCCACTGGCTGGCCCAGGA...CTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTTCTGCGGCTTCCCGTTaGCCAGCTCCATGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: HGPWEVPSRQPRLSATSLSAASR*PAPCRA
Trigger: TGCTCTGCATGGAGCTGGCCAACGGGAAGCCGCAGA...AAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CACAAACACAGGATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCCCACCCCGCAGGTCTTaGTGCACTCTGACCAGGGGC +
Preference number: 4 (lower is better)
Translates to: HKHRIHAGTRTGSHGRGGPPRRS*CTLTRG
Trigger: GCCCCTGGTCAGAGTGCACCAAGACCTGCGGGGTGG...GCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATCCTGTGTTTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGTGCCTGGCTGGTCCTaGCAGCTGTCATCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: RGRKCGGKRAPWEGLHKRVPGWS*QLSSGG
Trigger: GCCCCCAGATGACAGCTGCCAGGACCAGCCAGGCAC...CCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp AGCGCCTCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCAGTTGGTGCCTGGCTaGTCCTGGCAGCTGTCATCT +
Preference number: 4 (lower is better)
Translates to: SASARGRKCGGKRAPWEGQLVPG*SWQLSS
Trigger: AGATGACAGCTGCCAGGACCAGCCAGGCACCAACTG...CCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGAGGCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTGTCTGGGGGAGGCAGTTGGTGCCTGGCTaGTCCTGGCAGCTGTCATCT +
Preference number: 4 (lower is better)
Translates to: HAGTRTGSHGRGGSVWGRQLVPG*SWQLSS
Trigger: AGATGACAGCTGCCAGGACCAGCCAGGCACCAACTG...CCTCCCCCAGACAGAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp TTCAGAAGGCCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACCAGTTGGTGCCTGGCTaGTCCTGGCAGCTGTCATCT +
Preference number: 4 (lower is better)
Translates to: FRRPCHPERAWATGPEQDQLVPG*SWQLSS
Trigger: AGATGACAGCTGCCAGGACCAGCCAGGCACCAACTG...GTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGGCCTTCTGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGGGCACAGTTGGTGCCTaGCTGGTCCTGGCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: RGKSPLDSRGSVPRLLGQGTVGA*LVLAAV
Trigger: GACAGCTGCCAGGACCAGCCAGGCACCAACTGTGCC...CTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp AAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGTGGCCAGGGCACAGTTaGTGCCTGGCTGGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: KRAPWEGLHKREHAWASLWPGHS*CLAGPG
Trigger: GCCAGGACCAGCCAGGCACCAACTGTGCCCTGGCCA...CAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGTGGCCAGGGCACAGTTaGTGCCTGGCTGGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: GVESAAGRELHGRGSIRGWPGHS*CLAGPG
Trigger: GCCAGGACCAGCCAGGCACCAACTGTGCCCTGGCCA...CCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCGCTTGGTCTTCATCTaGAAGGGGCTGCAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: GRGKSPLDSRGSVPRLLGRLVFI*KGLQLP
Trigger: CGGCAGCTGCAGCCCCTTCCAGATGAAGACCAAGCG...GCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGCGTGCCCCGCAGTTGTCTGGCAGACCCTaGCTTCGGGTCAGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: PLDSRGSVPRLLGQRAPQLSGRP*LRVSRL
Trigger: CAACCTGCTGACCCGAAGCCAGGGTCTGCCAGACAA...CTGCGGGGCACGCTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp CAAACACAGGATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCGTCCGTGGACCCGGTTaGCACTGTGTCCCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: QTQDPRRNTDRFPRQGWLVRGPG*HCVPSY
Trigger: GTAGCTGGGGACACAGTGTCAACCGGGTCCACGGAC...GAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATCCTGTGTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp GGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGGTCCGTGGACCCGGTTaGCACTGTGTCCCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: GVESAAGRELHGRGSIRGVRGPG*HCVPSY
Trigger: GTAGCTGGGGACACAGTGTCAACCGGGTCCACGGAC...CCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp CATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCTGCCTGAGCCGTGCCTGCGATGTTaGAGTTCTTGGGGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: HGRGSIRGSTPGPPWLPEPCLRC*SSWGCP
Trigger: TGGACAGCCCCAAGAACTTCAACATCGCAGGCACGG...CTCAGGCAGCCAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp GGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGTGGGCCGCCTGTACTTaGCCACCGTGCCTGCGATGT +
Preference number: 4 (lower is better)
Translates to: GVESAAGRELHGRGSIRGWAACT*PPCLRC
Trigger: ACATCGCAGGCACGGTGGTCAAGTACAGGCGGCCCA...CCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp CCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGCGTGCCCCGCAGTCTGGTTCCACACCATaGCATTCAGGCCCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: PLDSRGSVPRLLGQRAPQSGSTP*HSGPGW
Trigger: CCAACCAGGGCCTGAATGTCATGGTGTGGAACCAGA...CTGCGGGGCACGCTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp CACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTGCGTGTACTCGAAGGTaGTGGAGGGGCTTTTGCCGT +
Preference number: 4 (lower is better)
Translates to: HGPWEVPSRQPRLSATSLACTRR*WRGFCR
Trigger: ACGGCAAAAGCCCCTCCATCACCTTCGAGTACACGC...AAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp CATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCTGCCTGAGGCGTGTACTCGAAGGTaGTGGAGGGGCTTTTGCCGT +
Preference number: 4 (lower is better)
Translates to: HGRGSIRGSTPGPPWLPEACTRR*WRGFCR
Trigger: ACGGCAAAAGCCCCTCCATCACCTTCGAGTACACGC...CTCAGGCAGCCAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp CGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGTGGCGTACGCAGACATaGCCCCTGTGGTGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: RGRKCGGKRAPWEGLHKRWRTQT*PLWCRW
Trigger: CCACCTGCACCACAGGGGTCATGTCTGCGTACGCCA...CCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp CAAACACAGGATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTGGCGTACGCAGACATaGCCCCTGTGGTGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: QTQDPRRNTDRFPRQGWLWRTQT*PLWCRW
Trigger: CCACCTGCACCACAGGGGTCATGTCTGCGTACGCCA...GAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATCCTGTGTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp GGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCGGCTGGTGTACCACTTaGAGCAGGGCCTCTCGAAAC +
Preference number: 4 (lower is better)
Translates to: GKRAPWEGLHKREHAWASGWCTT*SRASRN
Trigger: GTTTCGAGAGGCCCTGCTTCAAGTGGTACACCAGCC...GGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp GGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCGGCTGGTGTACCACTTaGAGCAGGGCCTCTCGAAAC +
Preference number: 4 (lower is better)
Translates to: GRGKSPLDSRGSVPRLLGGWCTT*SRASRN
Trigger: GTTTCGAGAGGCCCTGCTTCAAGTGGTACACCAGCC...GCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp CATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCTGCCTGAGCGCAGAGGTTCACTTTaGTGGCCAGGGCACAGTTGG +
Preference number: 4 (lower is better)
Translates to: HGRGSIRGSTPGPPWLPERRGSL*WPGHSW
Trigger: CCAACTGTGCCCTGGCCATCAAAGTGAACCTCTGCG...CTCAGGCAGCCAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp GATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTGTCTGGGGCGCAGAGGTTCACTTTaGTGGCCAGGGCACAGTTGG +
Preference number: 4 (lower is better)
Translates to: DPRRNTDRFPRQGWLCLGRRGSL*WPGHSW
Trigger: CCAACTGTGCCCTGGCCATCAAAGTGAACCTCTGCG...CCCCAGACAGAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGGTACCGCTTGGACGTaGCCGTGCAGGTCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: RGRKCGGKRAPWEGLHKRGTAWT*PCRSCS
Trigger: GGAACAGGACCTGCACGGGCACGTCCAAGCGGTACC...CCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCGACACTCCTGCACTCTaGAGAGCTGGTACCGCTTGG +
Preference number: 4 (lower is better)
Translates to: GKRAPWEGLHKREHAWASDTPAL*RAGTAW
Trigger: CCAAGCGGTACCAGCTCTGCAGAGTGCAGGAGTGTC...GGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGAAGGAGACGCACTaGTCCTCGCGGAAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: GKRAPWEGLHKREHAWASLKETH*SSRKLL
Trigger: GAGGAGCTTCCGCGAGGAGCAGTGCGTCTCCTTCAA...GGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCTTGAAGGAGACGCACTaGTCCTCGCGGAAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: GRGKSPLDSRGSVPRLLGLKETH*SSRKLL
Trigger: GAGGAGCTTCCGCGAGGAGCAGTGCGTCTCCTTCAA...GCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp ACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAAGAGGCTTCCACTGGTaGGTCCGCCCGTTGTACACG +
Preference number: 4 (lower is better)
Translates to: TGRGKSPLDSRGSVPRLLRGFHW*VRPLYT
Trigger: CGTGTACAACGGGCGGACGCACCAGTGGAAGCCTCT...TAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGCAGGTCACACGGTTTaGTGGAGATGTGGACATAGT +
Preference number: 4 (lower is better)
Translates to: PCHPERAWATGPEQDTSTAGHTV*WRCGHS
Trigger: ACTATGTCCACATCTCCAGCAAACCGTGTGACCTGC...GGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCGTCCCCCTGGCAGATaGCACACTTGTCCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: AGRELHGRGSIRGSTPGPRPPGR*HTCPVC
Trigger: ACACACTGGACAAGTGTGGCATCTGCCAGGGGGACG...AGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp TGGGCAAGCGCCTCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGCGTCCCCCTGGCAGATaGCACACTTGTCCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: WASASARGRKCGGKRAPWRPPGR*HTCPVC
Trigger: ACACACTGGACAAGTGTGGCATCTGCCAGGGGGACG...CCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGAGGCGCTTGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTCGTCCCCCTGGCAGATaGCACACTTGTCCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: HGPWEVPSRQPRLSATSLRPPGR*HTCPVC
Trigger: ACACACTGGACAAGTGTGGCATCTGCCAGGGGGACG...AAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCGGTGGGCATTCCCCTTaGGATAGTTGCCCGTCACGT +
Preference number: 4 (lower is better)
Translates to: GRGKSPLDSRGSVPRLLGGGHSP*DSCPSR
Trigger: ACGTGACGGGCAACTATCGCAAGGGGAATGCCCACC...GCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGCGTGCCCCGCAGCCTTGGGGCGCCCTGTaGAAAGATGCTGTTCACAGT +
Preference number: 4 (lower is better)
Translates to: PLDSRGSVPRLLGQRAPQPWGAL*KDAVHS
Trigger: ACTGTGAACAGCATCTTTGCACAGGGCGCCCCAAGG...CTGCGGGGCACGCTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp AAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGTGGTGCAGGTGGCACTaGAGGGCTCGTGGGACGAGA +
Preference number: 4 (lower is better)
Translates to: KRAPWEGLHKREHAWASLWCRWH*RARGTR
Trigger: TCTCGTCCCACGAGCCCTGCAGTGCCACCTGCACCA...CAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGTGGTGCAGGTGGCACTaGAGGGCTCGTGGGACGAGA +
Preference number: 4 (lower is better)
Translates to: GVESAAGRELHGRGSIRGWCRWH*RARGTR
Trigger: TCTCGTCCCACGAGCCCTGCAGTGCCACCTGCACCA...CCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGAACACTCGCTCCAGCTaGTCGTCTCCCACCTGGGCT +
Preference number: 4 (lower is better)
Translates to: RGKSPLDSRGSVPRLLGQNTRSS*SSPTWA
Trigger: AGCCCAGGTGGGAGACGAGCAGCTGGAGCGAGTGTT...CTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp ACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAAACACTCGCTCCAGCTaGTCGTCTCCCACCTGGGCT +
Preference number: 4 (lower is better)
Translates to: TGRGKSPLDSRGSVPRLLNTRSS*SSPTWA
Trigger: AGCCCAGGTGGGAGACGAGCAGCTGGAGCGAGTGTT...TAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp TCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATCCCCACACTTGGCAGTaGACTCGGACCACTCCGACA +
Preference number: 4 (lower is better)
Translates to: SARGRKCGGKRAPWEGLHPHTWQ*TRTTPT
Trigger: TGTCGGAGTGGTCCGAGTGCACTGCCAAGTGTGGGG...ATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp AAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGCTGATGGTGCGGCCTTaGCCGCAGCTTCCACTGCAC +
Preference number: 4 (lower is better)
Translates to: KRAPWEGLHKREHAWASLLMVRP*PQLPLH
Trigger: GTGCAGTGGAAGCTGCGGGCAAGGCCGCACCATCAG...CAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCGTCTTGCAGTACACGTaGCTGATGGTGCGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: GKRAPWEGLHKREHAWASVLQYT*LMVRPC
Trigger: GCAAGGCCGCACCATCAGGCACGTGTACTGCAAGAC...GGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTGTCTTGCAGTACACGTaGCTGATGGTGCGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: HGPWEVPSRQPRLSATSLVLQYT*LMVRPC
Trigger: GCAAGGCCGCACCATCAGGCACGTGTACTGCAAGAC...AAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp TCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATCGTTGGCCAGCTCCATaGAGAGCACCAGCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: SARGRKCGGKRAPWEGLHRWPAP*RAPAAS
Trigger: AGAAGCGGCTGGTGCTCTGCATGGAGCTGGCCAACG...ATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp TGGGCAAGCGCCTCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGATCACAGGCCTGTCTaGCAACGGGCTTCACCAACG +
Preference number: 4 (lower is better)
Translates to: WASASARGRKCGGKRAPWDHRPV*QRASPT
Trigger: CGTTGGTGAAGCCCGTTGGCAGACAGGCCTGTGATC...CCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGAGGCGCTTGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CAAACACAGGATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTCCGTGGGGCAGGGCTaGAGATCACAGGCCTGTCTG +
Preference number: 4 (lower is better)
Translates to: QTQDPRRNTDRFPRQGWLSVGQG*RSQACL
Trigger: CAGACAGGCCTGTGATCTGCAGCCCTGCCCCACGGA...GAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATCCTGTGTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp AAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGTCCGTGGGGCAGGGCTaGAGATCACAGGCCTGTCTG +
Preference number: 4 (lower is better)
Translates to: KRAPWEGLHKREHAWASLSVGQG*RSQACL
Trigger: CAGACAGGCCTGTGATCTGCAGCCCTGCCCCACGGA...CAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CACAAACACAGGATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCGCCCGGGGTAGAAAGTaGGGCGGGAAGAGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: HKHRIHAGTRTGSHGRGGARGRK*GGKRAP
Trigger: TGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGC...GCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATCCTGTGTTTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp AAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCCCGGGGTAGAAAGTaGGGCGGGAAGAGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: KRAPWEGLHKREHAWASLARGRK*GGKRAP
Trigger: TGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGC...CAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCCCCCCTCCAGGCTATTaGATGTTGGGCTGTTGTCCG +
Preference number: 4 (lower is better)
Translates to: GKRAPWEGLHKREHAWASPPPGY*MLGCCP
Trigger: CGGACAACAGCCCAACATCCAATAGCCTGGAGGGGG...GGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCC
63% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp TGGGCAAGCGCCTCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGCCCCCTCCAGGCTATTaGATGTTGGGCTGTTGTCCG +
Preference number: 4 (lower is better)
Translates to: WASASARGRKCGGKRAPWPPPGY*MLGCCP
Trigger: CGGACAACAGCCCAACATCCAATAGCCTGGAGGGGG...CCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGAGGCGCTTGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGTGCACTCTGCAGAGCTaGTACCGCTTGGACGTGCCC +
Preference number: 4 (lower is better)
Translates to: RGKSPLDSRGSVPRLLGQCTLQS*YRLDVP
Trigger: GGGCACGTCCAAGCGGTACCAGCTCTGCAGAGTGCA...CTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCGCCCGTTGTACACGTaGGAGTTGAAGGAGACGCAC +
Preference number: 4 (lower is better)
Translates to: AGRELHGRGSIRGSTPGPRPLYT*ELKETH
Trigger: GTGCGTCTCCTTCAACTCCCACGTGTACAACGGGCG...AGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCGCCCGTTGTACACGTaGGAGTTGAAGGAGACGCAC +
Preference number: 4 (lower is better)
Translates to: GRGKSPLDSRGSVPRLLGRPLYT*ELKETH
Trigger: GTGCGTCTCCTTCAACTCCCACGTGTACAACGGGCG...GCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCTGCCTGAGTACAGAGGCTTCCACTaGTGCGTCCGCCCGTTGTAC +
Preference number: 4 (lower is better)
Translates to: HGRGSIRGSTPGPPWLPEYRGFH*CVRPLY
Trigger: GTACAACGGGCGGACGCACCAGTGGAAGCCTCTGTA...CTCAGGCAGCCAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp AGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCTACAGAGGCTTCCACTaGTGCGTCCGCCCGTTGTAC +
Preference number: 4 (lower is better)
Translates to: RSTKVHGPWEVPSRQPRLYRGFH*CVRPLY
Trigger: GTACAACGGGCGGACGCACCAGTGGAAGCCTCTGTA...GAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTGTCTGGGGGAGGTGTCCAGTGTGTGGGTaGAGAAAAGCACCCCGTCAC +
Preference number: 4 (lower is better)
Translates to: HAGTRTGSHGRGGSVWGRCPVCG*RKAPRH
Trigger: GTGACGGGGTGCTTTTCTCCACCCACACACTGGACA...CCTCCCCCAGACAGAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGCTGCTACCGTCCCCCTaGCAGATGCCACACTTGTCC +
Preference number: 4 (lower is better)
Translates to: RGKSPLDSRGSVPRLLGQLLPSP*QMPHLS
Trigger: GGACAAGTGTGGCATCTGCCAGGGGGACGGTAGCAG...CTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGATGACATTCAGGCCCTaGTTGGTGGGCCCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: RGKSPLDSRGSVPRLLGQMTFRP*LVGPCA
Trigger: GGCACAGGGGCCCACCAACCAGGGCCTGAATGTCAT...CTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp AAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGCCTGCGCCCAGCAGCTaGTCAGAGATGGCGTTAGCC +
Preference number: 4 (lower is better)
Translates to: KRAPWEGLHKREHAWASLPAPSS*SEMALA
Trigger: GGCTAACGCCATCTCTGACCAGCTGCTGGGCGCAGG...CAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGCCTGCGCCCAGCAGCTaGTCAGAGATGGCGTTAGCC +
Preference number: 4 (lower is better)
Translates to: RGRKCGGKRAPWEGLHKRPAPSS*SEMALA
Trigger: GGCTAACGCCATCTCTGACCAGCTGCTGGGCGCAGG...CCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CACAAACACAGGATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCCCTGCGCCCAGCAGCTaGTCAGAGATGGCGTTAGCC +
Preference number: 4 (lower is better)
Translates to: HKHRIHAGTRTGSHGRGGPAPSS*SEMALA
Trigger: GGCTAACGCCATCTCTGACCAGCTGCTGGGCGCAGG...GCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATCCTGTGTTTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGGCCAGGGAGCTCCTTaGGGCGCCCTGTGCAAAGAT +
Preference number: 4 (lower is better)
Translates to: RGRKCGGKRAPWEGLHKRGQGAP*GALCKD
Trigger: ATCTTTGCACAGGGCGCCCCAAGGAGCTCCCTGGCC...CCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CAAACACAGGATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCGGCCAGGGAGCTCCTTaGGGCGCCCTGTGCAAAGAT +
Preference number: 4 (lower is better)
Translates to: QTQDPRRNTDRFPRQGWLGQGAP*GALCKD
Trigger: ATCTTTGCACAGGGCGCCCCAAGGAGCTCCCTGGCC...GAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATCCTGTGTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTGTCTGGGGGCTAACGTTGGGGAATaGGGCCTCGGAGGAGCTGTT +
Preference number: 4 (lower is better)
Translates to: DPRRNTDRFPRQGWLCLGANVGE*GLGGAV
Trigger: AACAGCTCCTCCGAGGCCCCATTCCCCAACGTTAGC...CCCCAGACAGAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CACAAACACAGGATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCAGCAGCGGATGTCCCTaGTCACCACACTGCGCTCCC +
Preference number: 4 (lower is better)
Translates to: HKHRIHAGTRTGSHGRGGSSGCP*SPHCAP
Trigger: GGGAGCGCAGTGTGGTGACCAGGGACATCCGCTGCT...GCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATCCTGTGTTTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp AGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCTCTCCCCTACAGGCCTaGTGTTGGGGTCACACAGCT +
Preference number: 4 (lower is better)
Translates to: RSTKVHGPWEVPSRQPRLSPLQA*CWGHTA
Trigger: AGCTGTGTGACCCCAACACCAGGCCTGTAGGGGAGA...GAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTTCTCCCCTACAGGCCTaGTGTTGGGGTCACACAGCT +
Preference number: 4 (lower is better)
Translates to: HGPWEVPSRQPRLSATSLSPLQA*CWGHTA
Trigger: AGCTGTGTGACCCCAACACCAGGCCTGTAGGGGAGA...AAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGCTACCCGTCCGTCGCTaGTCTTGCAGTACACGTGCC +
Preference number: 4 (lower is better)
Translates to: RGKSPLDSRGSVPRLLGQLPVRR*SCSTRA
Trigger: GGCACGTGTACTGCAAGACCAGCGACGGACGGGTAG...CTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGGCTTGGTCTCCATCTaGCACTGGGACTCAGGTACT +
Preference number: 4 (lower is better)
Translates to: LPQEHKGPRAVGSPLSTAGLVSI*HWDSGT
Trigger: AGTACCTGAGTCCCAGTGCCAGATGGAGACCAAGCC...GGCTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CTCTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGGGGAAGAGAGCTCCATaGGAGGGGCTCCATAAGAGG +
Preference number: 4 (lower is better)
Translates to: LCPRSTKVHGPWEVPSRQGKRAP*EGLHKR
Trigger: CCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCC...CTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCTTGTCTGGCAGACCCTaGCTTCGGGTCAGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: GRGKSPLDSRGSVPRLLGLSGRP*LRVSRL
Trigger: CAACCTGCTGACCCGAAGCCAGGGTCTGCCAGACAA...GCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp ACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTACCGTGCCTGCGATGTTaGAGTTCTTGGGGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: TGRGKSPLDSRGSVPRLLPCLRC*SSWGCP
Trigger: TGGACAGCCCCAAGAACTTCAACATCGCAGGCACGG...TAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp CTCTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGTCTGGTTCCACACCATaGCATTCAGGCCCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: LCPRSTKVHGPWEVPSRQSGSTP*HSGPGW
Trigger: CCAACCAGGGCCTGAATGTCATGGTGTGGAACCAGA...CTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp GATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTGTCTGGGGTCTGGTTCCACACCATaGCATTCAGGCCCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: DPRRNTDRFPRQGWLCLGSGSTP*HSGPGW
Trigger: CCAACCAGGGCCTGAATGTCATGGTGTGGAACCAGA...CCCCAGACAGAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp AAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGGTCTTGGTGCACTCTaGCCAGGGGCTGGTGTACCA +
Preference number: 4 (lower is better)
Translates to: KRAPWEGLHKREHAWASLGLGAL*PGAGVP
Trigger: TGGTACACCAGCCCCTGGTCAGAGTGCACCAAGACC...CAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp CAAACACAGGATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTCCCCTGGTAGCACTTaGCGTCTCGCATCCTCACGC +
Preference number: 4 (lower is better)
Translates to: QTQDPRRNTDRFPRQGWLSPGST*RLASSR
Trigger: GCGTGAGGATGCGAGACGTCAAGTGCTACCAGGGGA...GAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATCCTGTGTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp GGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGTCCCCTGGTAGCACTTaGCGTCTCGCATCCTCACGC +
Preference number: 4 (lower is better)
Translates to: GVESAAGRELHGRGSIRGSPGST*RLASSR
Trigger: GCGTGAGGATGCGAGACGTCAAGTGCTACCAGGGGA...CCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp TCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATGACACTCCTGCACTCTaGAGAGCTGGTACCGCTTGG +
Preference number: 4 (lower is better)
Translates to: SARGRKCGGKRAPWEGLHDTPAL*RAGTAW
Trigger: CCAAGCGGTACCAGCTCTGCAGAGTGCAGGAGTGTC...ATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGAGGCTTCCACTGGTaGGTCCGCCCGTTGTACACG +
Preference number: 4 (lower is better)
Translates to: GVESAAGRELHGRGSIRGRGFHW*VRPLYT
Trigger: CGTGTACAACGGGCGGACGCACCAGTGGAAGCCTCT...CCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTGTCTGGGGTCCACGGTGGTACAGTaGAGGTCACACGGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: DPRRNTDRFPRQGWLCLGSTVVQ*RSHGLL
Trigger: CAGCAAACCGTGTGACCTGCACTGTACCACCGTGGA...CCCCAGACAGAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CAAACACAGGATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTCCCCTTGCGATAGTTaGCCGTCACGTGGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: QTQDPRRNTDRFPRQGWLSPCDS*PSRGCS
Trigger: GCTGCACCCACGTGACGGGCAACTATCGCAAGGGGA...GAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATCCTGTGTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGCTCTCGTGTGGCGGCTaGAGCAGCGTGTACTCGAAG +
Preference number: 4 (lower is better)
Translates to: RGRKCGGKRAPWEGLHKRLSCGG*SSVYSK
Trigger: CTTCGAGTACACGCTGCTGCAGCCGCCACACGAGAG...CCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CAAACACAGGATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCAACACTCGCTCCAGCTaGTCGTCTCCCACCTGGGCT +
Preference number: 4 (lower is better)
Translates to: QTQDPRRNTDRFPRQGWLNTRSS*SSPTWA
Trigger: AGCCCAGGTGGGAGACGAGCAGCTGGAGCGAGTGTT...GAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATCCTGTGTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGCGTTGGCCAGCTCCATaGAGAGCACCAGCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: GVESAAGRELHGRGSIRGRWPAP*RAPAAS
Trigger: AGAAGCGGCTGGTGCTCTGCATGGAGCTGGCCAACG...CCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGGCCTCTCGAAACACGTaGTCTCCTCGGGAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: RGKSPLDSRGSVPRLLGQASRNT*SPREAS
Trigger: AGAAGCCTCCCGAGGAGAGCACGTGTTTCGAGAGGC...CTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGGATCACAGGCCTGTCTaGCAACGGGCTTCACCAACG +
Preference number: 4 (lower is better)
Translates to: RGKSPLDSRGSVPRLLGQDHRPV*QRASPT
Trigger: CGTTGGTGAAGCCCGTTGGCAGACAGGCCTGTGATC...CTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCTGCCTGAGGTATGGCCCTGGTGCTaGAGACACCACCTGCCTTTA +
Preference number: 4 (lower is better)
Translates to: HGRGSIRGSTPGPPWLPEVWPWC*RHHLPL
Trigger: TAAAGGCAGGTGGTGTCTCCAGCACCAGGGCCATAC...CTCAGGCAGCCAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354484.8
CDS-3UTR CCA 90 bp CACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTCAGGCTATTGGATGTTaGGCTGTTGTCCGTGGACCC +
Preference number: 4 (lower is better)
Translates to: HGPWEVPSRQPRLSATSLQAIGC*AVVRGP
Trigger: GGGTCCACGGACAACAGCCCAACATCCAATAGCCTG...AAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTGTCTGGGGCAGGCTATTGGATGTTaGGCTGTTGTCCGTGGACCC +
Preference number: 4 (lower is better)
Translates to: DPRRNTDRFPRQGWLCLGQAIGC*AVVRGP
Trigger: GGGTCCACGGACAACAGCCCAACATCCAATAGCCTG...CCCCAGACAGAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGTACAGAGGCTTCCACTaGTGCGTCCGCCCGTTGTAC +
Preference number: 4 (lower is better)
Translates to: RGKSPLDSRGSVPRLLGQYRGFH*CVRPLY
Trigger: GTACAACGGGCGGACGCACCAGTGGAAGCCTCTGTA...CTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp AGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCTGTCCAGTGTGTGGGTaGAGAAAAGCACCCCGTCAC +
Preference number: 4 (lower is better)
Translates to: RSTKVHGPWEVPSRQPRLCPVCG*RKAPRH
Trigger: GTGACGGGGTGCTTTTCTCCACCCACACACTGGACA...GAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GCCGGAGGCTCTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTGGGCTTTTGCCGTTCTaGTTCCACACCATGACATTC +
Preference number: 4 (lower is better)
Translates to: AGGSAPGAQRSTGRGKSPGLLPF*FHTMTF
Trigger: GAATGTCATGGTGTGGAACCAGAACGGCAAAAGCCC...AGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAGAGCCTCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp ACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAAGAAGCCATAGTAGATaGGCTGGGGGCGGCTCTCGT +
Preference number: 4 (lower is better)
Translates to: TGRGKSPLDSRGSVPRLLRSHSR*AGGGSR
Trigger: ACGAGAGCCGCCCCCAGCCCATCTACTATGGCTTCT...TAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CAAACACAGGATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTGCGCTCCCCACACTTaGCAGTGCACTCGGACCACT +
Preference number: 4 (lower is better)
Translates to: QTQDPRRNTDRFPRQGWLCAPHT*QCTRTT
Trigger: AGTGGTCCGAGTGCACTGCCAAGTGTGGGGAGCGCA...GAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATCCTGTGTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGCGTGCCCCCTACAGGCCTGGTGTTaGGGTCACACAGCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: VPSRQPRLSATSLRPACPLQAWC*GHTASH
Trigger: ATGAGAAGCTGTGTGACCCCAACACCAGGCCTGTAG...GGGGCACGCTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp AAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGCTACCCGTCCGTCGCTaGTCTTGCAGTACACGTGCC +
Preference number: 4 (lower is better)
Translates to: KRAPWEGLHKREHAWASLLPVRR*SCSTRA
Trigger: GGCACGTGTACTGCAAGACCAGCGACGGACGGGTAG...CAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTGTCTCCATCTGGCACTaGGACTCAGGTACTACCCGT +
Preference number: 4 (lower is better)
Translates to: HGPWEVPSRQPRLSATSLVSIWH*DSGTTR
Trigger: ACGGGTAGTACCTGAGTCCCAGTGCCAGATGGAGAC...AAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTGGCTTGGTCTCCATCTaGCACTGGGACTCAGGTACT +
Preference number: 4 (lower is better)
Translates to: AGRELHGRGSIRGSTPGPGLVSI*HWDSGT
Trigger: AGTACCTGAGTCCCAGTGCCAGATGGAGACCAAGCC...AGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp AAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGGATGGCCAGAGGCTTaGTCTCCATCTGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: KRAPWEGLHKREHAWASLGWPEA*SPSGTG
Trigger: CCCAGTGCCAGATGGAGACCAAGCCTCTGGCCATCC...CAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CACAAACACAGGATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTGCGGCTTCCCGTTaGCCAGCTCCATGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: HKHRIHAGTRTGSHGRGGSAASR*PAPCRA
Trigger: TGCTCTGCATGGAGCTGGCCAACGGGAAGCCGCAGA...GCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATCCTGTGTTTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp ACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTACAGTTGGTGCCTGGCTaGTCCTGGCAGCTGTCATCT +
Preference number: 4 (lower is better)
Translates to: TGRGKSPLDSRGSVPRLLQLVPG*SWQLSS
Trigger: AGATGACAGCTGCCAGGACCAGCCAGGCACCAACTG...TAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGGGGAAGAGAGCTCCATaGGAGGGGCTCCATAAGAGG +
Preference number: 4 (lower is better)
Translates to: RGKSPLDSRGSVPRLLGQGKRAP*EGLHKR
Trigger: CCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCC...CTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGTTGTCTGGCAGACCCTaGCTTCGGGTCAGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: RGKSPLDSRGSVPRLLGQLSGRP*LRVSRL
Trigger: CAACCTGCTGACCCGAAGCCAGGGTCTGCCAGACAA...CTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp AAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGCCGTGCCTGCGATGTTaGAGTTCTTGGGGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: KRAPWEGLHKREHAWASLPCLRC*SSWGCP
Trigger: TGGACAGCCCCAAGAACTTCAACATCGCAGGCACGG...CAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp GGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGGGCTGGTGTACCACTTaGAGCAGGGCCTCTCGAAAC +
Preference number: 4 (lower is better)
Translates to: GVESAAGRELHGRGSIRGGWCTT*SRASRN
Trigger: GTTTCGAGAGGCCCTGCTTCAAGTGGTACACCAGCC...CCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp AAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGGCTGGTGTACCACTTaGAGCAGGGCCTCTCGAAAC +
Preference number: 4 (lower is better)
Translates to: KRAPWEGLHKREHAWASLGWCTT*SRASRN
Trigger: GTTTCGAGAGGCCCTGCTTCAAGTGGTACACCAGCC...CAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CAAACACAGGATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCGACACTCCTGCACTCTaGAGAGCTGGTACCGCTTGG +
Preference number: 4 (lower is better)
Translates to: QTQDPRRNTDRFPRQGWLDTPAL*RAGTAW
Trigger: CCAAGCGGTACCAGCTCTGCAGAGTGCAGGAGTGTC...GAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATCCTGTGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGGACACTCCTGCACTCTaGAGAGCTGGTACCGCTTGG +
Preference number: 4 (lower is better)
Translates to: GVESAAGRELHGRGSIRGDTPAL*RAGTAW
Trigger: CCAAGCGGTACCAGCTCTGCAGAGTGCAGGAGTGTC...CCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp AAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGTTGAAGGAGACGCACTaGTCCTCGCGGAAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: KRAPWEGLHKREHAWASLLKETH*SSRKLL
Trigger: GAGGAGCTTCCGCGAGGAGCAGTGCGTCTCCTTCAA...CAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTGTCTGGGGGAGGGCAGGTCACACGGTTTaGTGGAGATGTGGACATAGT +
Preference number: 4 (lower is better)
Translates to: HAGTRTGSHGRGGSVWGRAGHTV*WRCGHS
Trigger: ACTATGTCCACATCTCCAGCAAACCGTGTGACCTGC...CCTCCCCCAGACAGAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGGGTGGGCATTCCCCTTaGGATAGTTGCCCGTCACGT +
Preference number: 4 (lower is better)
Translates to: GVESAAGRELHGRGSIRGGGHSP*DSCPSR
Trigger: ACGTGACGGGCAACTATCGCAAGGGGAATGCCCACC...CCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCTGCCTGAGCTTGACCACCGTGCCTaGGATGTTGAAGTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: HGRGSIRGSTPGPPWLPELDHRA*DVEVLG
Trigger: CCCAAGAACTTCAACATCGCAGGCACGGTGGTCAAG...CTCAGGCAGCCAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp TGGGCAAGCGCCTCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGCTTGACCACCGTGCCTaGGATGTTGAAGTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: WASASARGRKCGGKRAPWLDHRA*DVEVLG
Trigger: CCCAAGAACTTCAACATCGCAGGCACGGTGGTCAAG...CCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGAGGCGCTTGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CACAAACACAGGATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCGTTGGTGGGCCCCTGTaGCACGATGTACTCGATTCC +
Preference number: 4 (lower is better)
Translates to: HKHRIHAGTRTGSHGRGGVGGPL*HDVLDS
Trigger: GGAATCGAGTACATCGTGGCACAGGGGCCCACCAAC...GCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATCCTGTGTTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGGTTGGTGGGCCCCTGTaGCACGATGTACTCGATTCC +
Preference number: 4 (lower is better)
Translates to: GVESAAGRELHGRGSIRGVGGPL*HDVLDS
Trigger: GGAATCGAGTACATCGTGGCACAGGGGCCCACCAAC...CCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGGTCTTGCAGTACACGTaGCTGATGGTGCGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: GVESAAGRELHGRGSIRGVLQYT*LMVRPC
Trigger: GCAAGGCCGCACCATCAGGCACGTGTACTGCAAGAC...CCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGGCCTCTCGAAACACGTaGTCTCCTCGGGAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: GVESAAGRELHGRGSIRGASRNT*SPREAS
Trigger: AGAAGCCTCCCGAGGAGAGCACGTGTTTCGAGAGGC...CCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp ACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTACACGTTGGGCTCGCCTaGAAGTTTCCTTCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: TGRGKSPLDSRGSVPRLLHVGLA*KFPSEG
Trigger: GCCTTCTGAAGGAAACTTGCAGGCGAGCCCAACGTG...TAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp AAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGCGCCCGTTGTACACGTaGGAGTTGAAGGAGACGCAC +
Preference number: 4 (lower is better)
Translates to: KRAPWEGLHKREHAWASLRPLYT*ELKETH
Trigger: GTGCGTCTCCTTCAACTCCCACGTGTACAACGGGCG...CAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGTACAGAGGCTTCCACTaGTGCGTCCGCCCGTTGTAC +
Preference number: 4 (lower is better)
Translates to: GVESAAGRELHGRGSIRGYRGFH*CVRPLY
Trigger: GTACAACGGGCGGACGCACCAGTGGAAGCCTCTGTA...CCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GCCGGAGGCTCTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTGGTCACACGGTTTGCTaGAGATGTGGACATAGTCAT +
Preference number: 4 (lower is better)
Translates to: AGGSAPGAQRSTGRGKSPGHTVC*RCGHSH
Trigger: ATGACTATGTCCACATCTCCAGCAAACCGTGTGACC...AGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAGAGCCTCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp ACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTATGTCCAGTGTGTGGGTaGAGAAAAGCACCCCGTCAC +
Preference number: 4 (lower is better)
Translates to: TGRGKSPLDSRGSVPRLLCPVCG*RKAPRH
Trigger: GTGACGGGGTGCTTTTCTCCACCCACACACTGGACA...TAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTGTCTGGGGTTCCTCTCTACAATCTaGATGTCTCGGGCACCAGCC +
Preference number: 4 (lower is better)
Translates to: DPRRNTDRFPRQGWLCLGFLSTI*MSRAPA
Trigger: GGCTGGTGCCCGAGACATCCAGATTGTAGAGAGGAA...CCCCAGACAGAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp TGGGCAAGCGCCTCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGTTCCTCTCTACAATCTaGATGTCTCGGGCACCAGCC +
Preference number: 4 (lower is better)
Translates to: WASASARGRKCGGKRAPWFLSTI*MSRAPA
Trigger: GGCTGGTGCCCGAGACATCCAGATTGTAGAGAGGAA...CCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGAGGCGCTTGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGCGTGCCCCGGGCTTTTGCCGTTCTaGTTCCACACCATGACATTC +
Preference number: 4 (lower is better)
Translates to: VPSRQPRLSATSLRPACPGLLPF*FHTMTF
Trigger: GAATGTCATGGTGTGGAACCAGAACGGCAAAAGCCC...GGGGCACGCTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp ACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTATCCTGGGAGGCGAAGTaGGTGTCAACCTCTTCGTCA +
Preference number: 4 (lower is better)
Translates to: TGRGKSPLDSRGSVPRLLSWEAK*VSTSSS
Trigger: TGACGAAGAGGTTGACACCCACTTCGCCTCCCAGGA...TAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp AAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCCGAGAAGAACTCCTaGGAGGCGAAGTGGGTGTCA +
Preference number: 4 (lower is better)
Translates to: KRAPWEGLHKREHAWASLAEKNS*EAKWVS
Trigger: TGACACCCACTTCGCCTCCCAGGAGTTCTTCTCGGC...CAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CAAACACAGGATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCGCCGAGAAGAACTCCTaGGAGGCGAAGTGGGTGTCA +
Preference number: 4 (lower is better)
Translates to: QTQDPRRNTDRFPRQGWLAEKNS*EAKWVS
Trigger: TGACACCCACTTCGCCTCCCAGGAGTTCTTCTCGGC...GAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATCCTGTGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CAAACACAGGATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCGCTAACGTTGGGGAATaGGGCCTCGGAGGAGCTGTT +
Preference number: 4 (lower is better)
Translates to: QTQDPRRNTDRFPRQGWLANVGE*GLGGAV
Trigger: AACAGCTCCTCCGAGGCCCCATTCCCCAACGTTAGC...GAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATCCTGTGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGGCTAACGTTGGGGAATaGGGCCTCGGAGGAGCTGTT +
Preference number: 4 (lower is better)
Translates to: GVESAAGRELHGRGSIRGANVGE*GLGGAV
Trigger: AACAGCTCCTCCGAGGCCCCATTCCCCAACGTTAGC...CCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGTCTCCCCTACAGGCCTaGTGTTGGGGTCACACAGCT +
Preference number: 4 (lower is better)
Translates to: RGRKCGGKRAPWEGLHKRSPLQA*CWGHTA
Trigger: AGCTGTGTGACCCCAACACCAGGCCTGTAGGGGAGA...CCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp AAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGTCTCCCCTACAGGCCTaGTGTTGGGGTCACACAGCT +
Preference number: 4 (lower is better)
Translates to: KRAPWEGLHKREHAWASLSPLQA*CWGHTA
Trigger: AGCTGTGTGACCCCAACACCAGGCCTGTAGGGGAGA...CAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp TCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATGTCTCCATCTGGCACTaGGACTCAGGTACTACCCGT +
Preference number: 4 (lower is better)
Translates to: SARGRKCGGKRAPWEGLHVSIWH*DSGTTR
Trigger: ACGGGTAGTACCTGAGTCCCAGTGCCAGATGGAGAC...ATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp AAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGGGAAGAGAGCTCCATaGGAGGGGCTCCATAAGAGG +
Preference number: 4 (lower is better)
Translates to: KRAPWEGLHKREHAWASLGKRAP*EGLHKR
Trigger: CCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCC...CAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CTCTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGGCAGGTCACACGGTTTaGTGGAGATGTGGACATAGT +
Preference number: 4 (lower is better)
Translates to: LCPRSTKVHGPWEVPSRQAGHTV*WRCGHS
Trigger: ACTATGTCCACATCTCCAGCAAACCGTGTGACCTGC...CTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CAAACACAGGATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTCCACGGTGGTACAGTaGAGGTCACACGGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: QTQDPRRNTDRFPRQGWLSTVVQ*RSHGLL
Trigger: CAGCAAACCGTGTGACCTGCACTGTACCACCGTGGA...GAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATCCTGTGTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CACAAACACAGGATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCCACGGTGGTACAGTaGAGGTCACACGGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: HKHRIHAGTRTGSHGRGGSTVVQ*RSHGLL
Trigger: CAGCAAACCGTGTGACCTGCACTGTACCACCGTGGA...GCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATCCTGTGTTTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGCTTGACCACCGTGCCTaGGATGTTGAAGTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: RGKSPLDSRGSVPRLLGQLDHRA*DVEVLG
Trigger: CCCAAGAACTTCAACATCGCAGGCACGGTGGTCAAG...CTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp AAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGCCTTGGGGCGCCCTGTaGAAAGATGCTGTTCACAGT +
Preference number: 4 (lower is better)
Translates to: KRAPWEGLHKREHAWASLPWGAL*KDAVHS
Trigger: ACTGTGAACAGCATCTTTGCACAGGGCGCCCCAAGG...CAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGCACGTTGGGCTCGCCTaGAAGTTTCCTTCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: GVESAAGRELHGRGSIRGHVGLA*KFPSEG
Trigger: GCCTTCTGAAGGAAACTTGCAGGCGAGCCCAACGTG...CCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGTTAGAAGGGGATTGTTaGCCAGGCGCAGTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: RGKSPLDSRGSVPRLLGQLEGDC*PGAVAH
Trigger: ATGAGCCACTGCGCCTGGCCAACAATCCCCTTCTAA...CTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354484.8
CDS-3UTR CCA 90 bp CACAAACACAGGATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTTGGGCTGTTGTCCGTaGACCCGGTTGACACTGTGT +
Preference number: 4 (lower is better)
Translates to: HKHRIHAGTRTGSHGRGGLGCCP*TRLTLC
Trigger: ACACAGTGTCAACCGGGTCCACGGACAACAGCCCAA...GCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATCCTGTGTTTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CAAACACAGGATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTTGGGCTGTTGTCCGTaGACCCGGTTGACACTGTGT +
Preference number: 4 (lower is better)
Translates to: QTQDPRRNTDRFPRQGWLLGCCP*TRLTLC
Trigger: ACACAGTGTCAACCGGGTCCACGGACAACAGCCCAA...GAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATCCTGTGTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp AAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGCAGGCTATTGGATGTTaGGCTGTTGTCCGTGGACCC +
Preference number: 4 (lower is better)
Translates to: KRAPWEGLHKREHAWASLQAIGC*AVVRGP
Trigger: GGGTCCACGGACAACAGCCCAACATCCAATAGCCTG...CAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp AGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCGGGCTTTTGCCGTTCTaGTTCCACACCATGACATTC +
Preference number: 4 (lower is better)
Translates to: RSTKVHGPWEVPSRQPRLGLLPF*FHTMTF
Trigger: GAATGTCATGGTGTGGAACCAGAACGGCAAAAGCCC...GAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CAAACACAGGATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTCCTGGGAGGCGAAGTaGGTGTCAACCTCTTCGTCA +
Preference number: 4 (lower is better)
Translates to: QTQDPRRNTDRFPRQGWLSWEAK*VSTSSS
Trigger: TGACGAAGAGGTTGACACCCACTTCGCCTCCCAGGA...GAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATCCTGTGTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGTCCTGGGAGGCGAAGTaGGTGTCAACCTCTTCGTCA +
Preference number: 4 (lower is better)
Translates to: GVESAAGRELHGRGSIRGSWEAK*VSTSSS
Trigger: TGACGAAGAGGTTGACACCCACTTCGCCTCCCAGGA...CCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGTCTCCATCTGGCACTaGGACTCAGGTACTACCCGT +
Preference number: 4 (lower is better)
Translates to: RGRKCGGKRAPWEGLHKRVSIWH*DSGTTR
Trigger: ACGGGTAGTACCTGAGTCCCAGTGCCAGATGGAGAC...CCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGGGCTTGGTCTCCATCTaGCACTGGGACTCAGGTACT +
Preference number: 4 (lower is better)
Translates to: GVESAAGRELHGRGSIRGGLVSI*HWDSGT
Trigger: AGTACCTGAGTCCCAGTGCCAGATGGAGACCAAGCC...CCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp AAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGACGAGGTCAGGAGTTTaGGACCAGCATGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: KRAPWEGLHKREHAWASLTRSGV*DQHGQH
Trigger: ATGTTGGCCATGCTGGTCTCAAACTCCTGACCTCGT...CAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354484.8
CDS-3UTR TCA 90 bp AGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCCCTTGTAGTTGCCGTTaGAGAAGTAGTAGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: RSTKVHGPWEVPSRQPRLPCSCR*RSSSQL
Trigger: AAGCTGGCTACTACTTCTTCAACGGCAACTACAAGG...GAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp CATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCTGCCTGAGCCTTGTAGTTGCCGTTaGAGAAGTAGTAGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: HGRGSIRGSTPGPPWLPEPCSCR*RSSSQL
Trigger: AAGCTGGCTACTACTTCTTCAACGGCAACTACAAGG...CTCAGGCAGCCAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp CACAAACACAGGATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCCTTGACCACCGTGCCTaGGATGTTGAAGTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: HKHRIHAGTRTGSHGRGGLDHRA*DVEVLG
Trigger: CCCAAGAACTTCAACATCGCAGGCACGGTGGTCAAG...GCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATCCTGTGTTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp TGGGCAAGCGCCTCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGGTCACACGGTTTGCTaGAGATGTGGACATAGTCAT +
Preference number: 4 (lower is better)
Translates to: WASASARGRKCGGKRAPWGHTVC*RCGHSH
Trigger: ATGACTATGTCCACATCTCCAGCAAACCGTGTGACC...CCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGAGGCGCTTGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp GGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGTTCCTCTCTACAATCTaGATGTCTCGGGCACCAGCC +
Preference number: 4 (lower is better)
Translates to: GVESAAGRELHGRGSIRGFLSTI*MSRAPA
Trigger: GGCTGGTGCCCGAGACATCCAGATTGTAGAGAGGAA...CCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGCTACAGGCCTGGTGTTaGGGTCACACAGCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: RGRKCGGKRAPWEGLHKRLQAWC*GHTASH
Trigger: ATGAGAAGCTGTGTGACCCCAACACCAGGCCTGTAG...CCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp AAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGCTACAGGCCTGGTGTTaGGGTCACACAGCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: KRAPWEGLHKREHAWASLLQAWC*GHTASH
Trigger: ATGAGAAGCTGTGTGACCCCAACACCAGGCCTGTAG...CAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp CAAACACAGGATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCCTACAGGCCTGGTGTTaGGGTCACACAGCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: QTQDPRRNTDRFPRQGWLLQAWC*GHTASH
Trigger: ATGAGAAGCTGTGTGACCCCAACACCAGGCCTGTAG...GAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATCCTGTGTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR GCA 90 bp GGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGGCAGGTCACACGGTTTaGTGGAGATGTGGACATAGT +
Preference number: 4 (lower is better)
Translates to: GVESAAGRELHGRGSIRGAGHTV*WRCGHS
Trigger: ACTATGTCCACATCTCCAGCAAACCGTGTGACCTGC...CCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CCA 90 bp TCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATGGTCACACGGTTTGCTaGAGATGTGGACATAGTCAT +
Preference number: 4 (lower is better)
Translates to: SARGRKCGGKRAPWEGLHGHTVC*RCGHSH
Trigger: ATGACTATGTCCACATCTCCAGCAAACCGTGTGACC...ATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp CACAAACACAGGATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCCCTTGTAGTTGCCGTTaGAGAAGTAGTAGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: HKHRIHAGTRTGSHGRGGPCSCR*RSSSQL
Trigger: AAGCTGGCTACTACTTCTTCAACGGCAACTACAAGG...GCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATCCTGTGTTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR TCA 90 bp CAAACACAGGATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCCCTTGTAGTTGCCGTTaGAGAAGTAGTAGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: QTQDPRRNTDRFPRQGWLPCSCR*RSSSQL
Trigger: AAGCTGGCTACTACTTCTTCAACGGCAACTACAAGG...GAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATCCTGTGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS GCA 90 bp GAAAGGGGCGAGCGCTGCGGAGGGCAGACGGCGCCAGGTGCGCTGTaGGTGCGGGGGCGGCGTGAGTGCAGAGGCTGCGGCCCGGCCTCC +
Preference number: 5 (lower is better)
Translates to: ERGERCGGQTAPGAL*VRGRRECRGCGPAS
Trigger: GGAGGCCGGGCCGCAGCCTCTGCACTCACGCCGCCCCCGCACGCACAGCGCACCTGGCGCCGTCTGCCCTCCGCAGCGCTCGCCCCTTTC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393061.7
ENST00000651351.2
CDS GCA 90 bp CCGACATCTCCCACTGGGGCCCGCAGGCGGGGTTCCGGCAGGTCTTaGGTTCCTCGGGCCGCACGGCCTCGGCTGCCTCGCACAGGTCGC +
Preference number: 5 (lower is better)
Translates to: PTSPTGARRRGSGRS*VPRAARPRLPRTGR
Trigger: GCGACCTGTGCGAGGCAGCCGAGGCCGTGCGGCCCGAGGAACGCAAGACCTGCCGGAACCCCGCCTGCGGGCCCCAGTGGGAGATGTCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS CCA 90 bp CGCCGCCGGCCTGCTCGCACACCTCGTTGGTCTCCTGGCCCTGGCTaGGGCCCAGCTCCATGTCCAGGCCCGGGTGGCCGAACAGCCGGT +
Preference number: 5 (lower is better)
Translates to: RRRPARTPRWSPGPG*GPAPCPGPGGRTAG
Trigger: ACCGGCTGTTCGGCCACCCGGGCCTGGACATGGAGCTGGGCCCCAGCCAGGGCCAGGAGACCAACGAGGTGTGCGAGCAGGCCGGCGGCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp AGGGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGCTGGCTGTGGGCCCGGGTTCCGGCAGGTCTaGCGTTCCTCGGGCCGCACG +
Preference number: 5 (lower is better)
Translates to: RAWATGPEQDTSTAGCGPGFRQV*RSSGRT
Trigger: CGTGCGGCCCGAGGAACGCAAGACCTGCCGGAACCC...GGGCCCACAGCCAGCGGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCCCT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS TCA 90 bp CAGGCCCGGGTGGCCGAACAGCCGGTTGTCCAGGCCCAGCCGCTCTaGGGAGGCCTGGCCGTAGAGGGAGCCGTTGTGCGGGACGAAGCC +
Preference number: 5 (lower is better)
Translates to: QARVAEQPVVQAQPL*GGLAVEGAVVRDEA
Trigger: GGCTTCGTCCCGCACAACGGCTCCCTCTACGGCCAGGCCTCCTCAGAGCGGCTGGGCCTGGACAACCGGCTGTTCGGCCACCCGGGCCTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp GGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGCTGGCTGTGGGCCCTGCGGCCAGGGAGCTCCTaGGGGCGCCCTGTGCAAAGA +
Preference number: 5 (lower is better)
Translates to: GVGYGPGARHLHRWLWALRPGSS*GRPVQR
Trigger: TCTTTGCACAGGGCGCCCCAAGGAGCTCCCTGGCCG...CAGGGCCCACAGCCAGCGGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp CCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCTCCTCGGGAGGCTTCTaGGCGAGCCCGCACTCGGGG +
Preference number: 5 (lower is better)
Translates to: PCHPERAWATGPEQDTSTSSGGF*ASPHSG
Trigger: CCCCGAGTGCGGGCTCGCCAAGAAGCCTCCCGAGGA...GGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS GCA 90 bp GGGGTTCCGGCAGGTCTTGCGTTCCTCGGGCCGCACGGCCTCGGCTaGCTCGCACAGGTCGCTGTACACGGAGCTGTCGAAGCCGGGCGA +
Preference number: 5 (lower is better)
Translates to: GVPAGLAFLGPHGLG*LAQVAVHGAVEAGR
Trigger: TCGCCCGGCTTCGACAGCTCCGTGTACAGCGACCTGTGCGAGGCAGCCGAGGCCGTGCGGCCCGAGGAACGCAAGACCTGCCGGAACCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS CCA 90 bp GCCCAGGAGCGGCGAGCAGGGAGGCCTTCTTCCCGGGTCCAGAACTaGGGGCCACATGTCGGGTGTCCAGACGGAGCAGCCGCTGGCCTG +
Preference number: 5 (lower is better)
Translates to: AQERRAGRPSSRVQN*GPHVGCPDGAAAGL
Trigger: CAGGCCAGCGGCTGCTCCGTCTGGACACCCGACATGTGGCCCCCAGTTCTGGACCCGGGAAGAAGGCCTCCCTGCTCGCCGCTCCTGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393061.7
CDS-3UTR CAA 90 bp GGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGCTGGCTGTGGGCCCTGACATTCAGGCCCTGGTaGGTGGGCCCCTGTGCCACG +
Preference number: 5 (lower is better)
Translates to: GVGYGPGARHLHRWLWALTFRPW*VGPCAT
Trigger: CGTGGCACAGGGGCCCACCAACCAGGGCCTGAATGT...CAGGGCCCACAGCCAGCGGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp AGGGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGCTGGCTGTGGGCCCGGAGTCCCCGTGACGTaGCGGTCTCGGAAGCCCTTG +
Preference number: 5 (lower is better)
Translates to: RAWATGPEQDTSTAGCGPGVPVT*RSRKPL
Trigger: CAAGGGCTTCCGAGACCGCAACGTCACGGGGACTCC...GGGCCCACAGCCAGCGGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp GGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGCTGGCTGTGGGCCCTGCCTGATGGTGCGGCCTaGCCCGCAGCTTCCACTGCA +
Preference number: 5 (lower is better)
Translates to: GVGYGPGARHLHRWLWALPDGAA*PAASTA
Trigger: TGCAGTGGAAGCTGCGGGCAAGGCCGCACCATCAGG...CAGGGCCCACAGCCAGCGGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp GGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCTGCCTGAGCCCAGCACCAGCCGCTTCTaGACCCCGCGCCCGCAGGTG +
Preference number: 5 (lower is better)
Translates to: GRGSIRGSTPGPPWLPEPSTSRF*TPRPQV
Trigger: CACCTGCGGGCGCGGGGTCAAGAAGCGGCTGGTGCT...GGGCTCAGGCAGCCAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp CAGAAGGCCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACACAGCACCAGCCGCTTCTaGACCCCGCGCCCGCAGGTG +
Preference number: 5 (lower is better)
Translates to: QKALPPREGVGYGPGARHSTSRF*TPRPQV
Trigger: CACCTGCGGGCGCGGGGTCAAGAAGCGGCTGGTGCT...GTGTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGGCCTTCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp GGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGCTGGCTGTGGGCCCTGATGGCCAGGGCACAGTaGGTGCCTGGCTGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: GVGYGPGARHLHRWLWALMARAQ*VPGWSW
Trigger: CCAGGACCAGCCAGGCACCAACTGTGCCCTGGCCAT...CAGGGCCCACAGCCAGCGGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS TCA 90 bp GCGGCTTCCCGTTGGCCAGCTCCATGCAGAGCACCAGCCGCTTCTTaGCCCCGCGCCCGCAGGTGGTGTTGCACCGCTCCCAGTCCTGGG +
Preference number: 5 (lower is better)
Translates to: AASRWPAPCRAPAAS*PRARRWCCTAPSPG
Trigger: CCCAGGACTGGGAGCGGTGCAACACCACCTGCGGGCGCGGGGTCAAGAAGCGGCTGGTGCTCTGCATGGAGCTGGCCAACGGGAAGCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS GCA 90 bp CCGGCGGACACTCCTGCACTCTGCAGAGCTGGTACCGCTTGGACGTaGCCGTGCAGGTCCTGTTCCCGGGGCCCGGGACGGACTTCCTCC +
Preference number: 5 (lower is better)
Translates to: PADTPALCRAGTAWT*PCRSCSRGPGRTSS
Trigger: GGAGGAAGTCCGTCCCGGGCCCCGGGAACAGGACCTGCACGGGCACGTCCAAGCGGTACCAGCTCTGCAGAGTGCAGGAGTGTCCGCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS GCA 90 bp TCGGGAGGCTTCTTGGCGAGCCCGCACTCGGGGCCACTGCGCGTCTaGGGCTTCCCGTTGGCCAGCTCCATGCAGAGCACCAGCCGCTTC +
Preference number: 5 (lower is better)
Translates to: SGGFLASPHSGPLRV*GFPLASSMQSTSRF
Trigger: GAAGCGGCTGGTGCTCTGCATGGAGCTGGCCAACGGGAAGCCGCAGACGCGCAGTGGCCCCGAGTGCGGGCTCGCCAAGAAGCCTCCCGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS CCA 90 bp TCCCGTCCGGCGGACACTCCTGCACTCTGCAGAGCTGGTACCGCTTaGACGTGCCCGTGCAGGTCCTGTTCCCGGGGCCCGGGACGGACT +
Preference number: 5 (lower is better)
Translates to: SRPADTPALCRAGTA*TCPCRSCSRGPGRT
Trigger: AGTCCGTCCCGGGCCCCGGGAACAGGACCTGCACGGGCACGTCCAAGCGGTACCAGCTCTGCAGAGTGCAGGAGTGTCCGCCGGACGGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp GGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGCTGGCTGTGGGCCCTGAGGCTGGTGCTAACGTaGGGGAATGGGGCCTCGGAG +
Preference number: 5 (lower is better)
Translates to: GVGYGPGARHLHRWLWALRLVLT*GNGASE
Trigger: CTCCGAGGCCCCATTCCCCAACGTTAGCACCAGCCT...CAGGGCCCACAGCCAGCGGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp GCCGGAGGCTCTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTGGACTCACGCCTTGCTaGCGCGCCTTGGGCCTGGTC +
Preference number: 5 (lower is better)
Translates to: AGGSAPGAQRSTGRGKSPGLTPC*RALGLV
Trigger: GACCAGGCCCAAGGCGCGCAAGCAAGGCGTGAGTCC...AGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAGAGCCTCCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp TTCAGAAGGCCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACCGCGGGACTCACGCCTaGCTTGCGCGCCTTGGGCCT +
Preference number: 5 (lower is better)
Translates to: FRRPCHPERAWATGPEQDRGTHA*LARLGP
Trigger: AGGCCCAAGGCGCGCAAGCAAGGCGTGAGTCCCGCG...GTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGGCCTTCTGAA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp GCCGGAGGCTCTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCCCACCCCGCAGGTCTaGGTGCACTCTGACCAGGGG +
Preference number: 5 (lower is better)
Translates to: AGGSAPGAQRSTGRGKSPPTPQV*VHSDQG
Trigger: CCCCTGGTCAGAGTGCACCAAGACCTGCGGGGTGGG...AGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAGAGCCTCCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS GCA 90 bp TGCCCGCAGCTTCCACTGCACGGTCCCCAGTCGGAGACGGTCCACTaGCGGTCACAGGGCGGGCCCGTGCAGTTCTTCTCCCCTACAGGC +
Preference number: 5 (lower is better)
Translates to: CPQLPLHGPQSETVH*RSQGGPVQFFSPTG
Trigger: GCCTGTAGGGGAGAAGAACTGCACGGGCCCGCCCTGTGACCGGCAGTGGACCGTCTCCGACTGGGGACCGTGCAGTGGAAGCTGCGGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS GCA 90 bp TGCTCTCCTCGGGAGGCTTCTTGGCGAGCCCGCACTCGGGGCCACTaGGCGTCTGCGGCTTCCCGTTGGCCAGCTCCATGCAGAGCACCA +
Preference number: 5 (lower is better)
Translates to: CSPREASWRARTRGH*ASAASRWPAPCRAP
Trigger: TGGTGCTCTGCATGGAGCTGGCCAACGGGAAGCCGCAGACGCGCAGTGGCCCCGAGTGCGGGCTCGCCAAGAAGCCTCCCGAGGAGAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS CCA 90 bp TCCCCACACTTGGCAGTGCACTCGGACCACTCCGACATCTCCCACTaGGGCCCGCAGGCGGGGTTCCGGCAGGTCTTGCGTTCCTCGGGC +
Preference number: 5 (lower is better)
Translates to: SPHLAVHSDHSDISH*GPQAGFRQVLRSSG
Trigger: GCCCGAGGAACGCAAGACCTGCCGGAACCCCGCCTGCGGGCCCCAGTGGGAGATGTCGGAGTGGTCCGAGTGCACTGCCAAGTGTGGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp AGGGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGCTGGCTGTGGGCCCTGTCCGTGGACCCGGTaGACACTGTGTCCCCAGCTA +
Preference number: 5 (lower is better)
Translates to: RAWATGPEQDTSTAGCGPCPWTR*TLCPQL
Trigger: TAGCTGGGGACACAGTGTCAACCGGGTCCACGGACA...GGGCCCACAGCCAGCGGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp AGGGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGCTGGCTGTGGGCCCTGGTGCGTCCGCCCGTaGTACACGTGGGAGTTGAAG +
Preference number: 5 (lower is better)
Translates to: RAWATGPEQDTSTAGCGPWCVRP*YTWELK
Trigger: CTTCAACTCCCACGTGTACAACGGGCGGACGCACCA...GGGCCCACAGCCAGCGGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp GCCGGAGGCTCTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTGGAGTCCCCGTGACGTaGCGGTCTCGGAAGCCCTTG +
Preference number: 5 (lower is better)
Translates to: AGGSAPGAQRSTGRGKSPGVPVT*RSRKPL
Trigger: CAAGGGCTTCCGAGACCGCAACGTCACGGGGACTCC...AGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAGAGCCTCCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp CACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTGTCTGGGGGAGGCGGCCAGGGAGCTCCTaGGGGCGCCCTGTGCAAAGA +
Preference number: 5 (lower is better)
Translates to: HAGTRTGSHGRGGSVWGRRPGSS*GRPVQR
Trigger: TCTTTGCACAGGGCGCCCCAAGGAGCTCCCTGGCCG...CCTCCCCCAGACAGAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp CCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGCGTGCCCCGCAGCGGCCAGGGAGCTCCTaGGGGCGCCCTGTGCAAAGA +
Preference number: 5 (lower is better)
Translates to: PLDSRGSVPRLLGQRAPQRPGSS*GRPVQR
Trigger: TCTTTGCACAGGGCGCCCCAAGGAGCTCCCTGGCCG...CTGCGGGGCACGCTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp TTCAGAAGGCCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACCCTTGCTTGCGCGCCTaGGGCCTGGTCCTGGCCTTG +
Preference number: 5 (lower is better)
Translates to: FRRPCHPERAWATGPEQDPCLRA*GLVLAL
Trigger: CAAGGCCAGGACCAGGCCCAAGGCGCGCAAGCAAGG...GTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGGCCTTCTGAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp CATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCTGCCTGAGCGCGGGACTCACGCCTaGCTTGCGCGCCTTGGGCCT +
Preference number: 5 (lower is better)
Translates to: HGRGSIRGSTPGPPWLPERGTHA*LARLGP
Trigger: AGGCCCAAGGCGCGCAAGCAAGGCGTGAGTCCCGCG...CTCAGGCAGCCAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp GATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTGTCTGGGGCGCGGGACTCACGCCTaGCTTGCGCGCCTTGGGCCT +
Preference number: 5 (lower is better)
Translates to: DPRRNTDRFPRQGWLCLGRGTHA*LARLGP
Trigger: AGGCCCAAGGCGCGCAAGCAAGGCGTGAGTCCCGCG...CCCCAGACAGAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp TGGGCAAGCGCCTCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGGGTTCCGGCAGGTCTaGCGTTCCTCGGGCCGCACG +
Preference number: 5 (lower is better)
Translates to: WASASARGRKCGGKRAPWGFRQV*RSSGRT
Trigger: CGTGCGGCCCGAGGAACGCAAGACCTGCCGGAACCC...CCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGAGGCGCTTGCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp GCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTGGGTTCCGGCAGGTCTaGCGTTCCTCGGGCCGCACG +
Preference number: 5 (lower is better)
Translates to: AGRELHGRGSIRGSTPGPGFRQV*RSSGRT
Trigger: CGTGCGGCCCGAGGAACGCAAGACCTGCCGGAACCC...AGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp GGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCTGCCTGAGCCCCTGCGCTCCCCACACTaGGCAGTGCACTCGGACCAC +
Preference number: 5 (lower is better)
Translates to: GRGSIRGSTPGPPWLPEPLRSPH*AVHSDH
Trigger: GTGGTCCGAGTGCACTGCCAAGTGTGGGGAGCGCAG...GGGCTCAGGCAGCCAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp CAGAAGGCCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACACGTCTGCGGCTTCCCGTaGGCCAGCTCCATGCAGAGC +
Preference number: 5 (lower is better)
Translates to: QKALPPREGVGYGPGARHVCGFP*ASSMQS
Trigger: GCTCTGCATGGAGCTGGCCAACGGGAAGCCGCAGAC...GTGTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGGCCTTCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp CTCTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGTCCTCGGGAGGCTTCTaGGCGAGCCCGCACTCGGGG +
Preference number: 5 (lower is better)
Translates to: LCPRSTKVHGPWEVPSRQSSGGF*ASPHSG
Trigger: CCCCGAGTGCGGGCTCGCCAAGAAGCCTCCCGAGGA...CTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp GGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCTCCTCGGGAGGCTTCTaGGCGAGCCCGCACTCGGGG +
Preference number: 5 (lower is better)
Translates to: GRGKSPLDSRGSVPRLLGSSGGF*ASPHSG
Trigger: CCCCGAGTGCGGGCTCGCCAAGAAGCCTCCCGAGGA...GCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp GTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGCGTGCCCCCCCACCCCGCAGGTCTaGGTGCACTCTGACCAGGGG +
Preference number: 5 (lower is better)
Translates to: VPSRQPRLSATSLRPACPPTPQV*VHSDQG
Trigger: CCCCTGGTCAGAGTGCACCAAGACCTGCGGGGTGGG...GGGGCACGCTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGAC
69% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp TTCAGAAGGCCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACCCCACCCCGCAGGTCTaGGTGCACTCTGACCAGGGG +
Preference number: 5 (lower is better)
Translates to: FRRPCHPERAWATGPEQDPTPQV*VHSDQG
Trigger: CCCCTGGTCAGAGTGCACCAAGACCTGCGGGGTGGG...GTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGGCCTTCTGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp CAGAAGGCCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACACCCCCAGGAGGGGCGCTaGGTCTTCATCTGGAAGGGG +
Preference number: 5 (lower is better)
Translates to: QKALPPREGVGYGPGARHPQEGR*VFIWKG
Trigger: CCCCTTCCAGATGAAGACCAAGCGCCCCTCCTGGGG...GTGTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGGCCTTCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS GCA 90 bp TCTTCCAGCAGCGCACGACGCGGAACTGGTAGCCCTCTCCGCAGGTaGGCGAACACTCGCTCCAGCTGCTCGTCTCCCACCTGGGCTGGC +
Preference number: 5 (lower is better)
Translates to: SSSSARRGTGSPLRR*ANTRSSCSSPTWAG
Trigger: GCCAGCCCAGGTGGGAGACGAGCAGCTGGAGCGAGTGTTCGCGCACCTGCGGAGAGGGCTACCAGTTCCGCGTCGTGCGCTGCTGGAAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp GTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGCGTGCCCCCAGAGCTGGTACCGCTaGGACGTGCCCGTGCAGGTC +
Preference number: 5 (lower is better)
Translates to: VPSRQPRLSATSLRPACPQSWYR*DVPVQV
Trigger: GACCTGCACGGGCACGTCCAAGCGGTACCAGCTCTG...GGGGCACGCTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp CTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGCCCGCAGGTCAGTGAGCTaGCAGGATGTGCCGTCGCGG +
Preference number: 5 (lower is better)
Translates to: LPQEHKGPRAVGSPLSTARRSVS*QDVPSR
Trigger: CCGCGACGGCACATCCTGCAAGCTCACTGACCTGCG...GGCTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp AGGGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGCTGGCTGTGGGCCCACCGTGCCTGCGATGTaGAAGTTCTTGGGGCTGTCC +
Preference number: 5 (lower is better)
Translates to: RAWATGPEQDTSTAGCGPTVPAM*KFLGLS
Trigger: GGACAGCCCCAAGAACTTCAACATCGCAGGCACGGT...GGGCCCACAGCCAGCGGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp AGGGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGCTGGCTGTGGGCCCGTGATGGAGGGGCTTTaGCCGTTCTGGTTCCACACC +
Preference number: 5 (lower is better)
Translates to: RAWATGPEQDTSTAGCGPVMEGL*PFWFHT
Trigger: GGTGTGGAACCAGAACGGCAAAAGCCCCTCCATCAC...GGGCCCACAGCCAGCGGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp CATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCTGCCTGAGTGGCCGAACAGCCGGTaGTCCAGGCCCAGCCGCTCT +
Preference number: 5 (lower is better)
Translates to: HGRGSIRGSTPGPPWLPEWPNSR*SRPSRS
Trigger: AGAGCGGCTGGGCCTGGACAACCGGCTGTTCGGCCA...CTCAGGCAGCCAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp TGGGCAAGCGCCTCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGTGGCCGAACAGCCGGTaGTCCAGGCCCAGCCGCTCT +
Preference number: 5 (lower is better)
Translates to: WASASARGRKCGGKRAPWWPNSR*SRPSRS
Trigger: AGAGCGGCTGGGCCTGGACAACCGGCTGTTCGGCCA...CCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGAGGCGCTTGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp GGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGCTGGCTGTGGGCCCTGACCTCTTCGTCATCCTaGTCCCCGGTGAGAGGAGTC +
Preference number: 5 (lower is better)
Translates to: GVGYGPGARHLHRWLWALTSSSS*SPVRGV
Trigger: GACTCCTCTCACCGGGGACAAGGATGACGAAGAGGT...CAGGGCCCACAGCCAGCGGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp GGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCTGCCTGAGCCCAGGCTGGTGCTAACGTaGGGGAATGGGGCCTCGGAG +
Preference number: 5 (lower is better)
Translates to: GRGSIRGSTPGPPWLPEPRLVLT*GNGASE
Trigger: CTCCGAGGCCCCATTCCCCAACGTTAGCACCAGCCT...GGGCTCAGGCAGCCAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp GGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCCCTTGCTTGCGCGCCTaGGGCCTGGTCCTGGCCTTG +
Preference number: 5 (lower is better)
Translates to: GKRAPWEGLHKREHAWASPCLRA*GLVLAL
Trigger: CAAGGCCAGGACCAGGCCCAAGGCGCGCAAGCAAGG...GGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp GCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGCTTGCGCGCCTaGGGCCTGGTCCTGGCCTTG +
Preference number: 5 (lower is better)
Translates to: AGRELHGRGSIRGSTPGPPCLRA*GLVLAL
Trigger: CAAGGCCAGGACCAGGCCCAAGGCGCGCAAGCAAGG...AGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp CATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCTGCCTGAGCCTTGCTTGCGCGCCTaGGGCCTGGTCCTGGCCTTG +
Preference number: 5 (lower is better)
Translates to: HGRGSIRGSTPGPPWLPEPCLRA*GLVLAL
Trigger: CAAGGCCAGGACCAGGCCCAAGGCGCGCAAGCAAGG...CTCAGGCAGCCAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp GATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTGTCTGGGGGGACTCACGCCTTGCTaGCGCGCCTTGGGCCTGGTC +
Preference number: 5 (lower is better)
Translates to: DPRRNTDRFPRQGWLCLGGLTPC*RALGLV
Trigger: GACCAGGCCCAAGGCGCGCAAGCAAGGCGTGAGTCC...CCCCAGACAGAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp CTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGCCCCTGATGGTGCGGCCTaGCCCGCAGCTTCCACTGCA +
Preference number: 5 (lower is better)
Translates to: LPQEHKGPRAVGSPLSTAPDGAA*PAASTA
Trigger: TGCAGTGGAAGCTGCGGGCAAGGCCGCACCATCAGG...GGCTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp CGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGAGCACCAGCCGCTTCTaGACCCCGCGCCCGCAGGTG +
Preference number: 5 (lower is better)
Translates to: RGKSPLDSRGSVPRLLGQSTSRF*TPRPQV
Trigger: CACCTGCGGGCGCGGGGTCAAGAAGCGGCTGGTGCT...CTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp TTCAGAAGGCCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACGTCTGCGGCTTCCCGTaGGCCAGCTCCATGCAGAGC +
Preference number: 5 (lower is better)
Translates to: FRRPCHPERAWATGPEQDVCGFP*ASSMQS
Trigger: GCTCTGCATGGAGCTGGCCAACGGGAAGCCGCAGAC...GTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGGCCTTCTGAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp TCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATTCCTCGGGAGGCTTCTaGGCGAGCCCGCACTCGGGG +
Preference number: 5 (lower is better)
Translates to: SARGRKCGGKRAPWEGLHSSGGF*ASPHSG
Trigger: CCCCGAGTGCGGGCTCGCCAAGAAGCCTCCCGAGGA...ATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp TTCAGAAGGCCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACATGGCCAGGGCACAGTaGGTGCCTGGCTGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: FRRPCHPERAWATGPEQDMARAQ*VPGWSW
Trigger: CCAGGACCAGCCAGGCACCAACTGTGCCCTGGCCAT...GTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGGCCTTCTGAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp GTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGCGTGCCCCATGGCCAGGGCACAGTaGGTGCCTGGCTGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: VPSRQPRLSATSLRPACPMARAQ*VPGWSW
Trigger: CCAGGACCAGCCAGGCACCAACTGTGCCCTGGCCAT...GGGGCACGCTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp GTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGCGTGCCCCCCCCAGGAGGGGCGCTaGGTCTTCATCTGGAAGGGG +
Preference number: 5 (lower is better)
Translates to: VPSRQPRLSATSLRPACPPQEGR*VFIWKG
Trigger: CCCCTTCCAGATGAAGACCAAGCGCCCCTCCTGGGG...GGGGCACGCTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGAC
68% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS GCA 90 bp GACACTCCTGCACTCTGCAGAGCTGGTACCGCTTGGACGTGCCCGTaGAGGTCCTGTTCCCGGGGCCCGGGACGGACTTCCTCCTCTGCT +
Preference number: 5 (lower is better)
Translates to: DTPALCRAGTAWTCP*RSCSRGPGRTSSSA
Trigger: AGCAGAGGAGGAAGTCCGTCCCGGGCCCCGGGAACAGGACCTGCACGGGCACGTCCAAGCGGTACCAGCTCTGCAGAGTGCAGGAGTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS CCA 90 bp AGCTTGCAGGATGTGCCGTCGCGGGCGGGGACCATGAGCTGCCGCTaGCCGTCCACGGTGGTACAGTGCAGGTCACACGGTTTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: SLQDVPSRAGTMSCR*PSTVVQCRSHGLLE
Trigger: CTCCAGCAAACCGTGTGACCTGCACTGTACCACCGTGGACGGCCAGCGGCAGCTCATGGTCCCCGCCCGCGACGGCACATCCTGCAAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS CCA 90 bp CGTCCAGGCCCTGGCTCTCAGCGCTCTCGGAGAAGCCATAGTAGATaGGCTGGGGGCGGCTCTCGTGTGGCGGCTGCAGCAGCGTGTACT +
Preference number: 5 (lower is better)
Translates to: RPGPGSQRSRRSHSR*AGGGSRVAAAAACT
Trigger: AGTACACGCTGCTGCAGCCGCCACACGAGAGCCGCCCCCAGCCCATCTACTATGGCTTCTCCGAGAGCGCTGAGAGCCAGGGCCTGGACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp GGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCCGCAGGTCAGTGAGCTaGCAGGATGTGCCGTCGCGG +
Preference number: 5 (lower is better)
Translates to: GKRAPWEGLHKREHAWASRRSVS*QDVPSR
Trigger: CCGCGACGGCACATCCTGCAAGCTCACTGACCTGCG...GGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp AGCGCCTCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGATGGGCCGCCTGTACTaGACCACCGTGCCTGCGATG +
Preference number: 5 (lower is better)
Translates to: SASARGRKCGGKRAPWEGMGRLY*TTVPAM
Trigger: CATCGCAGGCACGGTGGTCAAGTACAGGCGGCCCAT...CCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGAGGCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp CCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGCGTGCCCCGCAGATGGGCCGCCTGTACTaGACCACCGTGCCTGCGATG +
Preference number: 5 (lower is better)
Translates to: PLDSRGSVPRLLGQRAPQMGRLY*TTVPAM
Trigger: CATCGCAGGCACGGTGGTCAAGTACAGGCGGCCCAT...CTGCGGGGCACGCTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp GTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGCGTGCCCCATGGGCCGCCTGTACTaGACCACCGTGCCTGCGATG +
Preference number: 5 (lower is better)
Translates to: VPSRQPRLSATSLRPACPMGRLY*TTVPAM
Trigger: CATCGCAGGCACGGTGGTCAAGTACAGGCGGCCCAT...GGGGCACGCTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp GATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTGTCTGGGGACATTCAGGCCCTGGTaGGTGGGCCCCTGTGCCACG +
Preference number: 5 (lower is better)
Translates to: DPRRNTDRFPRQGWLCLGTFRPW*VGPCAT
Trigger: CGTGGCACAGGGGCCCACCAACCAGGGCCTGAATGT...CCCCAGACAGAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp CCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGTGATGGAGGGGCTTTaGCCGTTCTGGTTCCACACC +
Preference number: 5 (lower is better)
Translates to: PCHPERAWATGPEQDTSTVMEGL*PFWFHT
Trigger: GGTGTGGAACCAGAACGGCAAAAGCCCCTCCATCAC...GGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp TCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATTGGCCGAACAGCCGGTaGTCCAGGCCCAGCCGCTCT +
Preference number: 5 (lower is better)
Translates to: SARGRKCGGKRAPWEGLHWPNSR*SRPSRS
Trigger: AGAGCGGCTGGGCCTGGACAACCGGCTGTTCGGCCA...ATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp GGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCGGAGTCCCCGTGACGTaGCGGTCTCGGAAGCCCTTG +
Preference number: 5 (lower is better)
Translates to: GKRAPWEGLHKREHAWASGVPVT*RSRKPL
Trigger: CAAGGGCTTCCGAGACCGCAACGTCACGGGGACTCC...GGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp TTCAGAAGGCCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACAGGCTGGTGCTAACGTaGGGGAATGGGGCCTCGGAG +
Preference number: 5 (lower is better)
Translates to: FRRPCHPERAWATGPEQDRLVLT*GNGASE
Trigger: CTCCGAGGCCCCATTCCCCAACGTTAGCACCAGCCT...GTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGGCCTTCTGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp AAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGCGCGGGACTCACGCCTaGCTTGCGCGCCTTGGGCCT +
Preference number: 5 (lower is better)
Translates to: KRAPWEGLHKREHAWASLRGTHA*LARLGP
Trigger: AGGCCCAAGGCGCGCAAGCAAGGCGTGAGTCCCGCG...CAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp AAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGGGTTCCGGCAGGTCTaGCGTTCCTCGGGCCGCACG +
Preference number: 5 (lower is better)
Translates to: KRAPWEGLHKREHAWASLGFRQV*RSSGRT
Trigger: CGTGCGGCCCGAGGAACGCAAGACCTGCCGGAACCC...CAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp CACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTCTGCGCTCCCCACACTaGGCAGTGCACTCGGACCAC +
Preference number: 5 (lower is better)
Translates to: HGPWEVPSRQPRLSATSLLRSPH*AVHSDH
Trigger: GTGGTCCGAGTGCACTGCCAAGTGTGGGGAGCGCAG...AAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp CTCTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGCCTGATGGTGCGGCCTaGCCCGCAGCTTCCACTGCA +
Preference number: 5 (lower is better)
Translates to: LCPRSTKVHGPWEVPSRQPDGAA*PAASTA
Trigger: TGCAGTGGAAGCTGCGGGCAAGGCCGCACCATCAGG...CTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp CACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTGTCTGCGGCTTCCCGTaGGCCAGCTCCATGCAGAGC +
Preference number: 5 (lower is better)
Translates to: HGPWEVPSRQPRLSATSLVCGFP*ASSMQS
Trigger: GCTCTGCATGGAGCTGGCCAACGGGAAGCCGCAGAC...AAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp CCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCGGGCTGGTGTACCACTaGAAGCAGGGCCTCTCGAAA +
Preference number: 5 (lower is better)
Translates to: PCHPERAWATGPEQDTSTGLVYH*KQGLSK
Trigger: TTTCGAGAGGCCCTGCTTCAAGTGGTACACCAGCCC...GGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp ACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTACCCACCCCGCAGGTCTaGGTGCACTCTGACCAGGGG +
Preference number: 5 (lower is better)
Translates to: TGRGKSPLDSRGSVPRLLPTPQV*VHSDQG
Trigger: CCCCTGGTCAGAGTGCACCAAGACCTGCGGGGTGGG...TAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp GATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTGTCTGGGGATGGCCAGGGCACAGTaGGTGCCTGGCTGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: DPRRNTDRFPRQGWLCLGMARAQ*VPGWSW
Trigger: CCAGGACCAGCCAGGCACCAACTGTGCCCTGGCCAT...CCCCAGACAGAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp CCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACACCTCCACCCCGCAGAGGTTCACTTaGATGGCCAGGGCACAGTTG +
Preference number: 5 (lower is better)
Translates to: PCHPERAWATGPEQDTSTPQRFT*MARAQL
Trigger: CAACTGTGCCCTGGCCATCAAAGTGAACCTCTGCGG...GGTGGAGGTGTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS TCA 90 bp ACAGAGGCTTCCACTGGTGCGTCCGCCCGTTGTACACGTGGGAGTTaGAGGAGACGCACTGCTCCTCGCGGAAGCTCCTCCCGTCCGGCG +
Preference number: 5 (lower is better)
Translates to: TEASTGASARCTRGS*RRRTAPRGSSSRPA
Trigger: CGCCGGACGGGAGGAGCTTCCGCGAGGAGCAGTGCGTCTCCTTCAACTCCCACGTGTACAACGGGCGGACGCACCAGTGGAAGCCTCTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS GCA 90 bp TGGTGCGTCCGCCCGTTGTACACGTGGGAGTTGAAGGAGACGCACTaGTCCTCGCGGAAGCTCCTCCCGTCCGGCGGACACTCCTGCACT +
Preference number: 5 (lower is better)
Translates to: WCVRPLYTWELKETH*SSRKLLPSGGHSCT
Trigger: AGTGCAGGAGTGTCCGCCGGACGGGAGGAGCTTCCGCGAGGAGCAGTGCGTCTCCTTCAACTCCCACGTGTACAACGGGCGGACGCACCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS GCA 90 bp TCAGTGAGCTTGCAGGATGTGCCGTCGCGGGCGGGGACCATGAGCTaGCGCTGGCCGTCCACGGTGGTACAGTGCAGGTCACACGGTTTG +
Preference number: 5 (lower is better)
Translates to: SVSLQDVPSRAGTMS*RWPSTVVQCRSHGL
Trigger: CAAACCGTGTGACCTGCACTGTACCACCGTGGACGGCCAGCGGCAGCTCATGGTCCCCGCCCGCGACGGCACATCCTGCAAGCTCACTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS GCA 90 bp CATCTGGGGGCTCCGTGGGGCAGGGCTGCAGATCACAGGCCTGTCTaGCAACGGGCTTCACCAACGGATCGCAACCACGGACGATGTCGG +
Preference number: 5 (lower is better)
Translates to: HLGAPWGRAADHRPV*QRASPTDRNHGRCR
Trigger: CCGACATCGTCCGTGGTTGCGATCCGTTGGTGAAGCCCGTTGGCAGACAGGCCTGTGATCTGCAGCCCTGCCCCACGGAGCCCCCAGATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS CCA 90 bp CCTGTTCCCGGCCGAGGTGAGCAGGCTGGTGCTAACGTTGGGGAATaGGGCCTCGGAGGAGCTGTTGGCAACCCTGTCGCTGCTCAGCTC +
Preference number: 5 (lower is better)
Translates to: PVPGRGEQAGANVGE*GLGGAVGNPVAAQL
Trigger: GAGCTGAGCAGCGACAGGGTTGCCAACAGCTCCTCCGAGGCCCCATTCCCCAACGTTAGCACCAGCCTGCTCACCTCGGCCGGGAACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp AGCGCCTCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGGCACTTGTAGGGGTGTaGCAGCCGTATGGCCCTGGT +
Preference number: 5 (lower is better)
Translates to: SASARGRKCGGKRAPWEGALVGV*QPYGPG
Trigger: ACCAGGGCCATACGGCTGCAACACCCCTACAAGTGC...CCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGAGGCGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000354484.8
CDS-3UTR CAA 90 bp GGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCTGCCTGAGCCCCCAGGCTATTGGATGTaGGGCTGTTGTCCGTGGACC +
Preference number: 5 (lower is better)
Translates to: GRGSIRGSTPGPPWLPEPPGYWM*GCCPWT
Trigger: GGTCCACGGACAACAGCCCAACATCCAATAGCCTGG...GGGCTCAGGCAGCCAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp CGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGCAGAGCTGGTACCGCTaGGACGTGCCCGTGCAGGTC +
Preference number: 5 (lower is better)
Translates to: RGKSPLDSRGSVPRLLGQQSWYR*DVPVQV
Trigger: GACCTGCACGGGCACGTCCAAGCGGTACCAGCTCTG...CTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp GTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGCGTGCCCCTGGTGCGTCCGCCCGTaGTACACGTGGGAGTTGAAG +
Preference number: 5 (lower is better)
Translates to: VPSRQPRLSATSLRPACPWCVRP*YTWELK
Trigger: CTTCAACTCCCACGTGTACAACGGGCGGACGCACCA...GGGGCACGCTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp CGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGCGCAGGTCAGTGAGCTaGCAGGATGTGCCGTCGCGG +
Preference number: 5 (lower is better)
Translates to: RGKSPLDSRGSVPRLLGQRRSVS*QDVPSR
Trigger: CCGCGACGGCACATCCTGCAAGCTCACTGACCTGCG...CTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp GATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTGTCTGGGGATGGGCCGCCTGTACTaGACCACCGTGCCTGCGATG +
Preference number: 5 (lower is better)
Translates to: DPRRNTDRFPRQGWLCLGMGRLY*TTVPAM
Trigger: CATCGCAGGCACGGTGGTCAAGTACAGGCGGCCCAT...CCCCAGACAGAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp CAGAAGGCCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACACGTGATGGAGGGGCTTTaGCCGTTCTGGTTCCACACC +
Preference number: 5 (lower is better)
Translates to: QKALPPREGVGYGPGARHVMEGL*PFWFHT
Trigger: GGTGTGGAACCAGAACGGCAAAAGCCCCTCCATCAC...GTGTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGGCCTTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp CGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGTGGCCGAACAGCCGGTaGTCCAGGCCCAGCCGCTCT +
Preference number: 5 (lower is better)
Translates to: RGRKCGGKRAPWEGLHKRWPNSR*SRPSRS
Trigger: AGAGCGGCTGGGCCTGGACAACCGGCTGTTCGGCCA...CCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp ACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGAGTCCCCGTGACGTaGCGGTCTCGGAAGCCCTTG +
Preference number: 5 (lower is better)
Translates to: TGRGKSPLDSRGSVPRLLGVPVT*RSRKPL
Trigger: CAAGGGCTTCCGAGACCGCAACGTCACGGGGACTCC...TAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp GGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGGGACTCACGCCTTGCTaGCGCGCCTTGGGCCTGGTC +
Preference number: 5 (lower is better)
Translates to: GVESAAGRELHGRGSIRGGLTPC*RALGLV
Trigger: GACCAGGCCCAAGGCGCGCAAGCAAGGCGTGAGTCC...CCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp CGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGGACTCACGCCTTGCTaGCGCGCCTTGGGCCTGGTC +
Preference number: 5 (lower is better)
Translates to: RGRKCGGKRAPWEGLHKRGLTPC*RALGLV
Trigger: GACCAGGCCCAAGGCGCGCAAGCAAGGCGTGAGTCC...CCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp TCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATCTGCGCTCCCCACACTaGGCAGTGCACTCGGACCAC +
Preference number: 5 (lower is better)
Translates to: SARGRKCGGKRAPWEGLHLRSPH*AVHSDH
Trigger: GTGGTCCGAGTGCACTGCCAAGTGTGGGGAGCGCAG...ATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp GGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCTGCCTGAGCCCCCTACAGGCCTGGTGTaGGGGTCACACAGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: GRGSIRGSTPGPPWLPEPPTGLV*GSHSFS
Trigger: TGAGAAGCTGTGTGACCCCAACACCAGGCCTGTAGG...GGGCTCAGGCAGCCAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp GTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGCGTGCCCCCGTCCGTCGCTGGTCTaGCAGTACACGTGCCTGATG +
Preference number: 5 (lower is better)
Translates to: VPSRQPRLSATSLRPACPRPSLV*QYTCLM
Trigger: CATCAGGCACGTGTACTGCAAGACCAGCGACGGACG...GGGGCACGCTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp TCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATCCCCAGGAGGGGCGCTaGGTCTTCATCTGGAAGGGG +
Preference number: 5 (lower is better)
Translates to: SARGRKCGGKRAPWEGLHPQEGR*VFIWKG
Trigger: CCCCTTCCAGATGAAGACCAAGCGCCCCTCCTGGGG...ATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS TCA 90 bp GCAAGGCCACTGTCACCACCAGGCCAGCTCCGATCCTCTTCCAGATaGCCAGGGTACGCTTTGGGAAGAGCCCTCGGGGCCCAGCCAGTG +
Preference number: 5 (lower is better)
Translates to: ARPLSPPGQLRSSSR*PGYALGRALGAQPV
Trigger: CACTGGCTGGGCCCCGAGGGCTCTTCCCAAAGCGTACCCTGGTCATCTGGAAGAGGATCGGAGCTGGCCTGGTGGTGACAGTGGCCTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS GCA 90 bp TGGGACTCAGGTACTACCCGTCCGTCGCTGGTCTTGCAGTACACGTaGCTGATGGTGCGGCCTTGCCCGCAGCTTCCACTGCACGGTCCC +
Preference number: 5 (lower is better)
Translates to: WDSGTTRPSLVLQYT*LMVRPCPQLPLHGP
Trigger: GGGACCGTGCAGTGGAAGCTGCGGGCAAGGCCGCACCATCAGGCACGTGTACTGCAAGACCAGCGACGGACGGGTAGTACCTGAGTCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS CCA 90 bp CACCAGGCCAGCTCCGATCCTCTTCCAGATGACCAGGGTACGCTTTaGGAAGAGCCCTCGGGGCCCAGCCAGTGCCCAGGCCTCAAGGTT +
Preference number: 5 (lower is better)
Translates to: HQASSDPLPDDQGTL*EEPSGPSQCPGLKV
Trigger: AACCTTGAGGCCTGGGCACTGGCTGGGCCCCGAGGGCTCTTCCCAAAGCGTACCCTGGTCATCTGGAAGAGGATCGGAGCTGGCCTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS CCA 90 bp TACGCAGACATGACCCCTGTGGTGCAGGTGGCACTGCAGGGCTCGTaGGACGAGAGCTTCCACCGGTACATGTCCGCGGGACTCACGCCT +
Preference number: 5 (lower is better)
Translates to: YADMTPVVQVALQGS*DESFHRYMSAGLTP
Trigger: AGGCGTGAGTCCCGCGGACATGTACCGGTGGAAGCTCTCGTCCCACGAGCCCTGCAGTGCCACCTGCACCACAGGGGTCATGTCTGCGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp CATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCTGCCTGAGGCCTTTAGAAGGGGATaGTTGGCCAGGCGCAGTGGC +
Preference number: 5 (lower is better)
Translates to: HGRGSIRGSTPGPPWLPEAFRRG*LARRSG
Trigger: GCCACTGCGCCTGGCCAACAATCCCCTTCTAAAGGC...CTCAGGCAGCCAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354484.8
CDS-3UTR CAA 90 bp CTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGGCCCAGCAGGAACATaGCCATCTGCCATCCATCCT +
Preference number: 5 (lower is better)
Translates to: LPQEHKGPRAVGSPLSTAGPAGT*PSAIHP
Trigger: AGGATGGATGGCAGATGGCAATGTTCCTGCTGGGCC...GGCTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp CTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGCCCCAGGCTATTGGATGTaGGGCTGTTGTCCGTGGACC +
Preference number: 5 (lower is better)
Translates to: LPQEHKGPRAVGSPLSTAPGYWM*GCCPWT
Trigger: GGTCCACGGACAACAGCCCAACATCCAATAGCCTGG...GGCTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp CAAACACAGGATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCCAGAGCTGGTACCGCTaGGACGTGCCCGTGCAGGTC +
Preference number: 5 (lower is better)
Translates to: QTQDPRRNTDRFPRQGWLQSWYR*DVPVQV
Trigger: GACCTGCACGGGCACGTCCAAGCGGTACCAGCTCTG...GAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATCCTGTGTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp AAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGCAGAGCTGGTACCGCTaGGACGTGCCCGTGCAGGTC +
Preference number: 5 (lower is better)
Translates to: KRAPWEGLHKREHAWASLQSWYR*DVPVQV
Trigger: GACCTGCACGGGCACGTCCAAGCGGTACCAGCTCTG...CAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp CAGAAGGCCCTGCCACCCAGAGAGGGCGTGGGCTACGGGCCCGGAGCAAGACACTTGTACACGTGGGAGTaGAAGGAGACGCACTGCTCC +
Preference number: 5 (lower is better)
Translates to: QKALPPREGVGYGPGARHLYTWE*KETHCS
Trigger: GGAGCAGTGCGTCTCCTTCAACTCCCACGTGTACAA...GTGTCTTGCTCCGGGCCCGTAGCCCACGCCCTCTCTGGGTGGCAGGGCCTTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp GATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTGTCTGGGGTGGTGCGTCCGCCCGTaGTACACGTGGGAGTTGAAG +
Preference number: 5 (lower is better)
Translates to: DPRRNTDRFPRQGWLCLGWCVRP*YTWELK
Trigger: CTTCAACTCCCACGTGTACAACGGGCGGACGCACCA...CCCCAGACAGAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp GTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGCGTGCCCCACCGTGCCTGCGATGTaGAAGTTCTTGGGGCTGTCC +
Preference number: 5 (lower is better)
Translates to: VPSRQPRLSATSLRPACPTVPAM*KFLGLS
Trigger: GGACAGCCCCAAGAACTTCAACATCGCAGGCACGGT...GGGGCACGCTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp GGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGACATTCAGGCCCTGGTaGGTGGGCCCCTGTGCCACG +
Preference number: 5 (lower is better)
Translates to: GVESAAGRELHGRGSIRGTFRPW*VGPCAT
Trigger: CGTGGCACAGGGGCCCACCAACCAGGGCCTGAATGT...CCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp CGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGACATTCAGGCCCTGGTaGGTGGGCCCCTGTGCCACG +
Preference number: 5 (lower is better)
Translates to: RGRKCGGKRAPWEGLHKRTFRPW*VGPCAT
Trigger: CGTGGCACAGGGGCCCACCAACCAGGGCCTGAATGT...CCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp CCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGCGTGCCCCGCAGACCTCTTCGTCATCCTaGTCCCCGGTGAGAGGAGTC +
Preference number: 5 (lower is better)
Translates to: PLDSRGSVPRLLGQRAPQTSSSS*SPVRGV
Trigger: GACTCCTCTCACCGGGGACAAGGATGACGAAGAGGT...CTGCGGGGCACGCTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp GGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGCTGCGCTCCCCACACTaGGCAGTGCACTCGGACCAC +
Preference number: 5 (lower is better)
Translates to: GVESAAGRELHGRGSIRGLRSPH*AVHSDH
Trigger: GTGGTCCGAGTGCACTGCCAAGTGTGGGGAGCGCAG...CCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp CTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGCCCCTACAGGCCTGGTGTaGGGGTCACACAGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: LPQEHKGPRAVGSPLSTAPTGLV*GSHSFS
Trigger: TGAGAAGCTGTGTGACCCCAACACCAGGCCTGTAGG...GGCTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp GGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGCCTGATGGTGCGGCCTaGCCCGCAGCTTCCACTGCA +
Preference number: 5 (lower is better)
Translates to: GVESAAGRELHGRGSIRGPDGAA*PAASTA
Trigger: TGCAGTGGAAGCTGCGGGCAAGGCCGCACCATCAGG...CCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp CATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGGCTGCCTGAGCGTCCGTCGCTGGTCTaGCAGTACACGTGCCTGATG +
Preference number: 5 (lower is better)
Translates to: HGRGSIRGSTPGPPWLPERPSLV*QYTCLM
Trigger: CATCAGGCACGTGTACTGCAAGACCAGCGACGGACG...CTCAGGCAGCCAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp GCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCGTCCGTCGCTGGTCTaGCAGTACACGTGCCTGATG +
Preference number: 5 (lower is better)
Translates to: AGRELHGRGSIRGSTPGPRPSLV*QYTCLM
Trigger: CATCAGGCACGTGTACTGCAAGACCAGCGACGGACG...AGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp CACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTCGTCCGTCGCTGGTCTaGCAGTACACGTGCCTGATG +
Preference number: 5 (lower is better)
Translates to: HGPWEVPSRQPRLSATSLRPSLV*QYTCLM
Trigger: CATCAGGCACGTGTACTGCAAGACCAGCGACGGACG...AAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp CGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGTCTGCGGCTTCCCGTaGGCCAGCTCCATGCAGAGC +
Preference number: 5 (lower is better)
Translates to: RGRKCGGKRAPWEGLHKRVCGFP*ASSMQS
Trigger: GCTCTGCATGGAGCTGGCCAACGGGAAGCCGCAGAC...CCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp CACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTGTCTGGGGGAGGGGGCTGGTGTACCACTaGAAGCAGGGCCTCTCGAAA +
Preference number: 5 (lower is better)
Translates to: HAGTRTGSHGRGGSVWGRGLVYH*KQGLSK
Trigger: TTTCGAGAGGCCCTGCTTCAAGTGGTACACCAGCCC...CCTCCCCCAGACAGAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS TCA 90 bp ACTCAGGTACTACCCGTCCGTCGCTGGTCTTGCAGTACACGTGCCTaGTGGTGCGGCCTTGCCCGCAGCTTCCACTGCACGGTCCCCAGT +
Preference number: 5 (lower is better)
Translates to: TQVLPVRRWSCSTRA*WCGLARSFHCTVPS
Trigger: ACTGGGGACCGTGCAGTGGAAGCTGCGGGCAAGGCCGCACCATCAGGCACGTGTACTGCAAGACCAGCGACGGACGGGTAGTACCTGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS TCA 90 bp CCAACGGATCGCAACCACGGACGATGTCGGTCCCCTGGTAGCACTTaGCGTCTCGCATCCTCACGCCCACCCCGCAGGTCTTGGTGCACT +
Preference number: 5 (lower is better)
Translates to: PTDRNHGRCRSPGST*RLASSRPPRRSWCT
Trigger: AGTGCACCAAGACCTGCGGGGTGGGCGTGAGGATGCGAGACGTCAAGTGCTACCAGGGGACCGACATCGTCCGTGGTTGCGATCCGTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS GCA 90 bp GGTGGGCATTCCCCTTGCGATAGTTGCCCGTCACGTGGGTGCAGCTaGTACCGTCCCCCTGGCAGATGCCACACTTGTCCAGTGTGTGGG +
Preference number: 5 (lower is better)
Translates to: GGHSPCDSCPSRGCS*YRPPGRCHTCPVCG
Trigger: CCCACACACTGGACAAGTGTGGCATCTGCCAGGGGGACGGTAGCAGCTGCACCCACGTGACGGGCAACTATCGCAAGGGGAATGCCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS CCA 90 bp CGGGGCCCAGCCAGTGCCCAGGCCTCAAGGTTATCTGGGACTAGTTaGTCGTGGTTGTCTGGCAGACCCTGGCTTCGGGTCAGCAGGTTG +
Preference number: 5 (lower is better)
Translates to: RGPASAQASRLSGTS*SWLSGRPWLRVSRL
Trigger: CAACCTGCTGACCCGAAGCCAGGGTCTGCCAGACAACCACGACCAACTAGTCCCAGATAACCTTGAGGCCTGGGCACTGGCTGGGCCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp AGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCGGCCCAGCAGGAACATaGCCATCTGCCATCCATCCT +
Preference number: 5 (lower is better)
Translates to: RSTKVHGPWEVPSRQPRLGPAGT*PSAIHP
Trigger: AGGATGGATGGCAGATGGCAATGTTCCTGCTGGGCC...GAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp ACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTATGTCCGTGGACCCGGTaGACACTGTGTCCCCAGCTA +
Preference number: 5 (lower is better)
Translates to: TGRGKSPLDSRGSVPRLLCPWTR*TLCPQL
Trigger: TAGCTGGGGACACAGTGTCAACCGGGTCCACGGACA...TAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp AGCGCCTCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGTTGTACACGTGGGAGTaGAAGGAGACGCACTGCTCC +
Preference number: 5 (lower is better)
Translates to: SASARGRKCGGKRAPWEGLYTWE*KETHCS
Trigger: GGAGCAGTGCGTCTCCTTCAACTCCCACGTGTACAA...CCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGAGGCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp AGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCACCGTGCCTGCGATGTaGAAGTTCTTGGGGCTGTCC +
Preference number: 5 (lower is better)
Translates to: RSTKVHGPWEVPSRQPRLTVPAM*KFLGLS
Trigger: GGACAGCCCCAAGAACTTCAACATCGCAGGCACGGT...GAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp CACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTACCTCTTCGTCATCCTaGTCCCCGGTGAGAGGAGTC +
Preference number: 5 (lower is better)
Translates to: HGPWEVPSRQPRLSATSLTSSSS*SPVRGV
Trigger: GACTCCTCTCACCGGGGACAAGGATGACGAAGAGGT...AAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp GGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCACCTCTTCGTCATCCTaGTCCCCGGTGAGAGGAGTC +
Preference number: 5 (lower is better)
Translates to: GKRAPWEGLHKREHAWASTSSSS*SPVRGV
Trigger: GACTCCTCTCACCGGGGACAAGGATGACGAAGAGGT...GGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp CACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTCCTACAGGCCTGGTGTaGGGGTCACACAGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: HGPWEVPSRQPRLSATSLPTGLV*GSHSFS
Trigger: TGAGAAGCTGTGTGACCCCAACACCAGGCCTGTAGG...AAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp CTCTGCCCCAGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGGGGCTGGTGTACCACTaGAAGCAGGGCCTCTCGAAA +
Preference number: 5 (lower is better)
Translates to: LCPRSTKVHGPWEVPSRQGLVYH*KQGLSK
Trigger: TTTCGAGAGGCCCTGCTTCAAGTGGTACACCAGCCC...CTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCTGGGGCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS TCA 90 bp CCCCGCAGGTCTTGGTGCACTCTGACCAGGGGCTGGTGTACCACTTaGAGCAGGGCCTCTCGAAACACGTGCTCTCCTCGGGAGGCTTCT +
Preference number: 5 (lower is better)
Translates to: PRRSWCTLTRGWCTT*SRASRNTCSPREAS
Trigger: AGAAGCCTCCCGAGGAGAGCACGTGTTTCGAGAGGCCCTGCTTCAAGTGGTACACCAGCCCCTGGTCAGAGTGCACCAAGACCTGCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS TCA 90 bp GGCAGCACGCCTTGCTGTAGTACCAGTGCCCGCAGAGGTTCACTTTaGTGGCCAGGGCACAGTTGGTGCCTGGCTGGTCCTGGCAGCTGT +
Preference number: 5 (lower is better)
Translates to: GSTPCCSTSARRGSL*WPGHSWCLAGPGSC
Trigger: ACAGCTGCCAGGACCAGCCAGGCACCAACTGTGCCCTGGCCATCAAAGTGAACCTCTGCGGGCACTGGTACTACAGCAAGGCGTGCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS GCA 90 bp GGCAGACCCGGCACTTGTAGGGGTGTTGCAGCCGTATGGCCCTGGTaGTGGAGACACCACCTGCCTTTAGAAGGGGATTGTTGGCCAGGC +
Preference number: 5 (lower is better)
Translates to: GRPGTCRGVAAVWPW*WRHHLPLEGDCWPG
Trigger: GCCTGGCCAACAATCCCCTTCTAAAGGCAGGTGGTGTCTCCAGCACCAGGGCCATACGGCTGCAACACCCCTACAAGTGCCGGGTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354484.8
CDS GCA 90 bp GGGTCACCAGAGAGTAACCAAGGTGGGCATTCCCCTTGCGATAGTTaGCCGTCACGTGGGTGCAGCTGCTACCGTCCCCCTGGCAGATGC +
Preference number: 5 (lower is better)
Translates to: GSPESNQGGHSPCDS*PSRGCSCYRPPGRC
Trigger: GCATCTGCCAGGGGGACGGTAGCAGCTGCACCCACGTGACGGGCAACTATCGCAAGGGGAATGCCCACCTTGGTTACTCTCTGGTGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS CCA 90 bp CGGGGCCCAGCCAGTGCCCAGGCCTCAAGGTTATCTGGGACTAGTTaGTCGTGGTTGTCTGGCAGACCCGGCACTTGTAGGGGTGTTGCA +
Preference number: 5 (lower is better)
Translates to: RGPASAQASRLSGTS*SWLSGRPGTCRGVA
Trigger: TGCAACACCCCTACAAGTGCCGGGTCTGCCAGACAACCACGACCAACTAGTCCCAGATAACCTTGAGGCCTGGGCACTGGCTGGGCCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354484.8
CDS CCA 90 bp GCTCTCGGAGAAGCCATAGTAGATGGGCTGGGGGCGGCTCTCGTGTaGCGGCTGCAGCAGCGTGTACTCGAAGGTGATGGAGGGGCTTTT +
Preference number: 5 (lower is better)
Translates to: ALGEAIVDGLGAALV*RLQQRVLEGDGGAF
Trigger: AAAAGCCCCTCCATCACCTTCGAGTACACGCTGCTGCAGCCGCCACACGAGAGCCGCCCCCAGCCCATCTACTATGGCTTCTCCGAGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS CCA 90 bp TGTTGGGGTCACACAGCTTCTCATCCTCCGAGCAGCGGATGTCCCTaGTCACCACACTGCGCTCCCCACACTTGGCAGTGCACTCGGACC +
Preference number: 5 (lower is better)
Translates to: CWGHTASHPPSSGCP*SPHCAPHTWQCTRT
Trigger: GGTCCGAGTGCACTGCCAAGTGTGGGGAGCGCAGTGTGGTGACCAGGGACATCCGCTGCTCGGAGGATGAGAAGCTGTGTGACCCCAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp CGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGGGCCCAGCAGGAACATaGCCATCTGCCATCCATCCT +
Preference number: 5 (lower is better)
Translates to: RGKSPLDSRGSVPRLLGQGPAGT*PSAIHP
Trigger: AGGATGGATGGCAGATGGCAATGTTCCTGCTGGGCC...CTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp CAAACACAGGATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTGTCCGTGGACCCGGTaGACACTGTGTCCCCAGCTA +
Preference number: 5 (lower is better)
Translates to: QTQDPRRNTDRFPRQGWLCPWTR*TLCPQL
Trigger: TAGCTGGGGACACAGTGTCAACCGGGTCCACGGACA...GAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATCCTGTGTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp CGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGTGTCCGTGGACCCGGTaGACACTGTGTCCCCAGCTA +
Preference number: 5 (lower is better)
Translates to: RGRKCGGKRAPWEGLHKRCPWTR*TLCPQL
Trigger: TAGCTGGGGACACAGTGTCAACCGGGTCCACGGACA...CCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp ACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTACCAGGCTATTGGATGTaGGGCTGTTGTCCGTGGACC +
Preference number: 5 (lower is better)
Translates to: TGRGKSPLDSRGSVPRLLPGYWM*GCCPWT
Trigger: GGTCCACGGACAACAGCCCAACATCCAATAGCCTGG...TAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp AGGAGCACAAAGGTCCACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCTTGTACACGTGGGAGTaGAAGGAGACGCACTGCTCC +
Preference number: 5 (lower is better)
Translates to: RSTKVHGPWEVPSRQPRLLYTWE*KETHCS
Trigger: GGAGCAGTGCGTCTCCTTCAACTCCCACGTGTACAA...GAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGTGGACCTTTGTGCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp CACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTTTGTACACGTGGGAGTaGAAGGAGACGCACTGCTCC +
Preference number: 5 (lower is better)
Translates to: HGPWEVPSRQPRLSATSLLYTWE*KETHCS
Trigger: GGAGCAGTGCGTCTCCTTCAACTCCCACGTGTACAA...AAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp GGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGTGGTGCGTCCGCCCGTaGTACACGTGGGAGTTGAAG +
Preference number: 5 (lower is better)
Translates to: GVESAAGRELHGRGSIRGWCVRP*YTWELK
Trigger: CTTCAACTCCCACGTGTACAACGGGCGGACGCACCA...CCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp ACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTACCGCAGAGGTTCACTTaGATGGCCAGGGCACAGTTG +
Preference number: 5 (lower is better)
Translates to: TGRGKSPLDSRGSVPRLLPQRFT*MARAQL
Trigger: CAACTGTGCCCTGGCCATCAAAGTGAACCTCTGCGG...TAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp TCTGCCCGGGGTAGAAAGTGCGGCGGGAAGAGAGCTCCATGGGAGGGGCTCCATCCGCAGAGGTTCACTTaGATGGCCAGGGCACAGTTG +
Preference number: 5 (lower is better)
Translates to: SARGRKCGGKRAPWEGLHPQRFT*MARAQL
Trigger: CAACTGTGCCCTGGCCATCAAAGTGAACCTCTGCGG...ATGGAGCCCCTCCCATGGAGCTCTCTTCCCGCCGCACTTTCTACCCCGGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS GCA 90 bp AACCAAGGTGGGCATTCCCCTTGCGATAGTTGCCCGTCACGTGGGTaGAGCTGCTACCGTCCCCCTGGCAGATGCCACACTTGTCCAGTG +
Preference number: 5 (lower is better)
Translates to: NQGGHSPCDSCPSRG*SCYRPPGRCHTCPV
Trigger: CACTGGACAAGTGTGGCATCTGCCAGGGGGACGGTAGCAGCTGCACCCACGTGACGGGCAACTATCGCAAGGGGAATGCCCACCTTGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS GCA 90 bp ACAGCTTCTCATCCTCCGAGCAGCGGATGTCCCTGGTCACCACACTaGGCTCCCCACACTTGGCAGTGCACTCGGACCACTCCGACATCT +
Preference number: 5 (lower is better)
Translates to: TASHPPSSGCPWSPH*APHTWQCTRTTPTS
Trigger: AGATGTCGGAGTGGTCCGAGTGCACTGCCAAGTGTGGGGAGCGCAGTGTGGTGACCAGGGACATCCGCTGCTCGGAGGATGAGAAGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS CCA 90 bp GCGCCCAGCAGCTGGTCAGAGATGGCGTTAGCCGAGAAGAACTCCTaGGAGGCGAAGTGGGTGTCAACCTCTTCGTCATCCTTGTCCCCG +
Preference number: 5 (lower is better)
Translates to: APSSWSEMALAEKNS*EAKWVSTSSSSLSP
Trigger: CGGGGACAAGGATGACGAAGAGGTTGACACCCACTTCGCCTCCCAGGAGTTCTTCTCGGCTAACGCCATCTCTGACCAGCTGCTGGGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp CACAAACACAGGATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCCCAGGCTATTGGATGTaGGGCTGTTGTCCGTGGACC +
Preference number: 5 (lower is better)
Translates to: HKHRIHAGTRTGSHGRGGPGYWM*GCCPWT
Trigger: GGTCCACGGACAACAGCCCAACATCCAATAGCCTGG...GCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATCCTGTGTTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp CACAAACACAGGATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCACCGTGCCTGCGATGTaGAAGTTCTTGGGGCTGTCC +
Preference number: 5 (lower is better)
Translates to: HKHRIHAGTRTGSHGRGGTVPAM*KFLGLS
Trigger: GGACAGCCCCAAGAACTTCAACATCGCAGGCACGGT...GCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATCCTGTGTTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp CAAACACAGGATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCGGGCTGGTGTACCACTaGAAGCAGGGCCTCTCGAAA +
Preference number: 5 (lower is better)
Translates to: QTQDPRRNTDRFPRQGWLGLVYH*KQGLSK
Trigger: TTTCGAGAGGCCCTGCTTCAAGTGGTACACCAGCCC...GAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATCCTGTGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp AAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCCTTGCCGCAGAGGTTCACTTaGATGGCCAGGGCACAGTTG +
Preference number: 5 (lower is better)
Translates to: KRAPWEGLHKREHAWASLPQRFT*MARAQL
Trigger: CAACTGTGCCCTGGCCATCAAAGTGAACCTCTGCGG...CAAGGAGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS TCA 90 bp AGCTGTTGGCAACCCTGTCGCTGCTCAGCTCCAGGTAGGACCCGTTaGGCAGGTAAGGGCCAGCCCCCTCGTTCTCCTCATAATCCACGA +
Preference number: 5 (lower is better)
Translates to: SCWQPCRCSAPGRTR*AGKGQPPRSPHNPR
Trigger: TCGTGGATTATGAGGAGAACGAGGGGGCTGGCCCTTACCTGCTCAACGGGTCCTACCTGGAGCTGAGCAGCGACAGGGTTGCCAACAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS GCA 90 bp GCTGCCGCTGGCCGTCCACGGTGGTACAGTGCAGGTCACACGGTTTaGTGGAGATGTGGACATAGTCATCCGGGTACAGAGGCTTCCACT +
Preference number: 5 (lower is better)
Translates to: AAAGRPRWYSAGHTV*WRCGHSHPGTEAST
Trigger: AGTGGAAGCCTCTGTACCCGGATGACTATGTCCACATCTCCAGCAAACCGTGTGACCTGCACTGTACCACCGTGGACGGCCAGCGGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS CCA 90 bp TCTGGCAGACCCGGCACTTGTAGGGGTGTTGCAGCCGTATGGCCCTaGTGCTGGAGACACCACCTGCCTTTAGAAGGGGATTGTTGGCCA +
Preference number: 5 (lower is better)
Translates to: SGRPGTCRGVAAVWP*CWRHHLPLEGDCWP
Trigger: TGGCCAACAATCCCCTTCTAAAGGCAGGTGGTGTCTCCAGCACCAGGGCCATACGGCTGCAACACCCCTACAAGTGCCGGGTCTGCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354484.8
CDS CCA 90 bp GCCGCTGGCCGTCCACGGTGGTACAGTGCAGGTCACACGGTTTGCTaGAGATGTGGACATAGTCATCCGGGTACAGAGGCTTCCACTGGT +
Preference number: 5 (lower is better)
Translates to: AAGRPRWYSAGHTVC*RCGHSHPGTEASTG
Trigger: ACCAGTGGAAGCCTCTGTACCCGGATGACTATGTCCACATCTCCAGCAAACCGTGTGACCTGCACTGTACCACCGTGGACGGCCAGCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp GTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTAGGCCAGCGTGCCCCCTGTTCACAGTCTCATaGAGGGTGAAGTCCTTCAAG +
Preference number: 5 (lower is better)
Translates to: VPSRQPRLSATSLRPACPLFTVS*RVKSFK
Trigger: CTTGAAGGACTTCACCCTCAATGAGACTGTGAACAG...GGGGCACGCTGGCCTAAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS GCA 90 bp CTGGTTCCACACCATGACATTCAGGCCCTGGTTGGTGGGCCCCTGTaGCACGATGTACTCGATTCCGGTCTCATAGACATCCATGGGCCG +
Preference number: 5 (lower is better)
Translates to: LVPHHDIQALVGGPL*HDVLDSGLIDIHGP
Trigger: CGGCCCATGGATGTCTATGAGACCGGAATCGAGTACATCGTGGCACAGGGGCCCACCAACCAGGGCCTGAATGTCATGGTGTGGAACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp GATCCACGCAGGAACACGGACAGGTTCCCACGGCAGGGGTGGCTCTGTCTGGGGCTGTTCACAGTCTCATaGAGGGTGAAGTCCTTCAAG +
Preference number: 5 (lower is better)
Translates to: DPRRNTDRFPRQGWLCLGLFTVS*RVKSFK
Trigger: CTTGAAGGACTTCACCCTCAATGAGACTGTGAACAG...CCCCAGACAGAGCCACCCCTGCCGTGGGAACCTGTCCGTGTTCCTGCGTGGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp GCGGGAAGAGAGCTCCATGGGAGGGGCTCCATAAGAGGGAGCACGCCTGGGCCTCTGTTCACAGTCTCATaGAGGGTGAAGTCCTTCAAG +
Preference number: 5 (lower is better)
Translates to: AGRELHGRGSIRGSTPGPLFTVS*RVKSFK
Trigger: CTTGAAGGACTTCACCCTCAATGAGACTGTGAACAG...AGGCCCAGGCGTGCTCCCTCTTATGGAGCCCCTCCCATGGAGCTCTCTTCCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS-3UTR CAA 90 bp CACGGGCCGTGGGAAGTCCCCTCTCGACAGCCGAGGCTCAGTGCCACGTCTCTTCTGTTCACAGTCTCATaGAGGGTGAAGTCCTTCAAG +
Preference number: 5 (lower is better)
Translates to: HGPWEVPSRQPRLSATSLLFTVS*RVKSFK
Trigger: CTTGAAGGACTTCACCCTCAATGAGACTGTGAACAG...AAGAGACGTGGCACTGAGCCTCGGCTGTCGAGAGGGGACTTCCCACGGCCCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS CCA 90 bp TGGTCAGAGATGGCGTTAGCCGAGAAGAACTCCTGGGAGGCGAAGTaGGTGTCAACCTCTTCGTCATCCTTGTCCCCGGTGAGAGGAGTC +
Preference number: 5 (lower is better)
Translates to: WSEMALAEKNSWEAK*VSTSSSSLSPVRGV
Trigger: GACTCCTCTCACCGGGGACAAGGATGACGAAGAGGTTGACACCCACTTCGCCTCCCAGGAGTTCTTCTCGGCTAACGCCATCTCTGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS CCA 90 bp TCATTGAGGGTGAAGTCCTTCAAGTCAGAGCCTGCGCCCAGCAGCTaGTCAGAGATGGCGTTAGCCGAGAAGAACTCCTGGGAGGCGAAG +
Preference number: 5 (lower is better)
Translates to: SLRVKSFKSEPAPSS*SEMALAEKNSWEAK
Trigger: CTTCGCCTCCCAGGAGTTCTTCTCGGCTAACGCCATCTCTGACCAGCTGCTGGGCGCAGGCTCTGACTTGAAGGACTTCACCCTCAATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS GCA 90 bp GGTCTCATAGACATCCATGGGCCGCCTGTACTTGACCACCGTGCCTaGGATGTTGAAGTTCTTGGGGCTGTCCACCTTGTAGTTGCCGTT +
Preference number: 5 (lower is better)
Translates to: GLIDIHGPPVLDHRA*DVEVLGAVHLVVAV
Trigger: AACGGCAACTACAAGGTGGACAGCCCCAAGAACTTCAACATCGCAGGCACGGTGGTCAAGTACAGGCGGCCCATGGATGTCTATGAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS GCA 90 bp ATCCACGAAGAAGCTCTCGGCCAGGGAGCTCCTTGGGGCGCCCTGTaGAAAGATGCTGTTCACAGTCTCATTGAGGGTGAAGTCCTTCAA +
Preference number: 5 (lower is better)
Translates to: IHEEALGQGAPWGAL*KDAVHSLIEGEVLQ
Trigger: TTGAAGGACTTCACCCTCAATGAGACTGTGAACAGCATCTTTGCACAGGGCGCCCCAAGGAGCTCCCTGGCCGAGAGCTTCTTCGTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS CCA 90 bp GTTCTCCTCATAATCCACGAAGAAGCTCTCGGCCAGGGAGCTCCTTaGGGCGCCCTGTGCAAAGATGCTGTTCACAGTCTCATTGAGGGT +
Preference number: 5 (lower is better)
Translates to: VLLIIHEEALGQGAP*GALCKDAVHSLIEG
Trigger: ACCCTCAATGAGACTGTGAACAGCATCTTTGCACAGGGCGCCCCAAGGAGCTCCCTGGCCGAGAGCTTCTTCGTGGATTATGAGGAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS TCA 72 bp GACGGCGCCAGGTGCGCTGTGCGTGCGGGGGCGGCGTaGGTGCAGAGGCTGCGGCCCGGCCTCCCTCTCCCC +
Preference number: 6 (lower is better)
Translates to: DGARCAVRAGAA*VQRLRPGLPLP
Trigger: GGGGAGAGGGAGGCCGGGCCGCAGCCTCTGCACTCACGCCGCCCCCGCACGCACAGCGCACCTGGCGCCGTC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393061.7
ENST00000651351.2
CDS GCA 72 bp CCCACTGGGGCCCGCAGGCGGGGTTCCGGCAGGTCTTaGGTTCCTCGGGCCGCACGGCCTCGGCTGCCTCGC +
Preference number: 6 (lower is better)
Translates to: PTGARRRGSGRS*VPRAARPRLPR
Trigger: GCGAGGCAGCCGAGGCCGTGCGGCCCGAGGAACGCAAGACCTGCCGGAACCCCGCCTGCGGGCCCCAGTGGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS GCA 72 bp GAGCGCTGCGGAGGGCAGACGGCGCCAGGTGCGCTGTaGGTGCGGGGGCGGCGTGAGTGCAGAGGCTGCGGC +
Preference number: 6 (lower is better)
Translates to: ERCGGQTAPGAL*VRGRRECRGCG
Trigger: GCCGCAGCCTCTGCACTCACGCCGCCCCCGCACGCACAGCGCACCTGGCGCCGTCTGCCCTCCGCAGCGCTC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393061.7
ENST00000651351.2
CDS CAA 72 bp TCCCACTGGGGCCCGCAGGCGGGGTTCCGGCAGGTCTaGCGTTCCTCGGGCCGCACGGCCTCGGCTGCCTCG +
Preference number: 6 (lower is better)
Translates to: SHWGPQAGFRQV*RSSGRTASAAS
Trigger: CGAGGCAGCCGAGGCCGTGCGGCCCGAGGAACGCAAGACCTGCCGGAACCCCGCCTGCGGGCCCCAGTGGGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS CAA 90 bp TCCGACATCTCCCACTGGGGCCCGCAGGCGGGGTTCCGGCAGGTCTaGCGTTCCTCGGGCCGCACGGCCTCGGCTGCCTCGCACAGGTCG +
Preference number: 6 (lower is better)
Translates to: SDISHWGPQAGFRQV*RSSGRTASAASHRS
Trigger: CGACCTGTGCGAGGCAGCCGAGGCCGTGCGGCCCGAGGAACGCAAGACCTGCCGGAACCCCGCCTGCGGGCCCCAGTGGGAGATGTCGGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS GCA 72 bp CGGGAGGCTTCTTGGCGAGCCCGCACTCGGGGCCACTaGGCGTCTGCGGCTTCCCGTTGGCCAGCTCCATGC +
Preference number: 6 (lower is better)
Translates to: REASWRARTRGH*ASAASRWPAPC
Trigger: GCATGGAGCTGGCCAACGGGAAGCCGCAGACGCGCAGTGGCCCCGAGTGCGGGCTCGCCAAGAAGCCTCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS CCA 72 bp CCTGCTCGCACACCTCGTTGGTCTCCTGGCCCTGGCTaGGGCCCAGCTCCATGTCCAGGCCCGGGTGGCCGA +
Preference number: 6 (lower is better)
Translates to: PARTPRWSPGPG*GPAPCPGPGGR
Trigger: TCGGCCACCCGGGCCTGGACATGGAGCTGGGCCCCAGCCAGGGCCAGGAGACCAACGAGGTGTGCGAGCAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS CAA 90 bp CTCCCGTCCGGCGGACACTCCTGCACTCTGCAGAGCTGGTACCGCTaGGACGTGCCCGTGCAGGTCCTGTTCCCGGGGCCCGGGACGGAC +
Preference number: 6 (lower is better)
Translates to: LPSGGHSCTLQSWYR*DVPVQVLFPGPGTD
Trigger: GTCCGTCCCGGGCCCCGGGAACAGGACCTGCACGGGCACGTCCAAGCGGTACCAGCTCTGCAGAGTGCAGGAGTGTCCGCCGGACGGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS CAA 90 bp TTGGCGAGCCCGCACTCGGGGCCACTGCGCGTCTGCGGCTTCCCGTaGGCCAGCTCCATGCAGAGCACCAGCCGCTTCTTGACCCCGCGC +
Preference number: 6 (lower is better)
Translates to: LASPHSGPLRVCGFP*ASSMQSTSRFLTPR
Trigger: GCGCGGGGTCAAGAAGCGGCTGGTGCTCTGCATGGAGCTGGCCAACGGGAAGCCGCAGACGCGCAGTGGCCCCGAGTGCGGGCTCGCCAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS TCA 72 bp GTGGCCGAACAGCCGGTTGTCCAGGCCCAGCCGCTCTaGGGAGGCCTGGCCGTAGAGGGAGCCGTTGTGCGG +
Preference number: 6 (lower is better)
Translates to: VAEQPVVQAQPL*GGLAVEGAVVR
Trigger: CCGCACAACGGCTCCCTCTACGGCCAGGCCTCCTCAGAGCGGCTGGGCCTGGACAACCGGCTGTTCGGCCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS CAA 90 bp TGCGGCTTCCCGTTGGCCAGCTCCATGCAGAGCACCAGCCGCTTCTaGACCCCGCGCCCGCAGGTGGTGTTGCACCGCTCCCAGTCCTGG +
Preference number: 6 (lower is better)
Translates to: CGFPLASSMQSTSRF*TPRPQVVLHRSQSW
Trigger: CCAGGACTGGGAGCGGTGCAACACCACCTGCGGGCGCGGGGTCAAGAAGCGGCTGGTGCTCTGCATGGAGCTGGCCAACGGGAAGCCGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS TCA 72 bp CGTTGGCCAGCTCCATGCAGAGCACCAGCCGCTTCTTaGCCCCGCGCCCGCAGGTGGTGTTGCACCGCTCCC +
Preference number: 6 (lower is better)
Translates to: RWPAPCRAPAAS*PRARRWCCTAP
Trigger: GGGAGCGGTGCAACACCACCTGCGGGCGCGGGGTCAAGAAGCGGCTGGTGCTCTGCATGGAGCTGGCCAACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS TCA 72 bp CACATGTCGGGTGTCCAGACGGAGCAGCCGCTGGCCTaGGGTTACCGGGGAGGCTGGCGGTGGCAAAGCCCC +
Preference number: 6 (lower is better)
Translates to: HMSGVQTEQPLA*GYRGGWRWQSP
Trigger: GGGGCTTTGCCACCGCCAGCCTCCCCGGTAACCTCAGGCCAGCGGCTGCTCCGTCTGGACACCCGACATGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393061.7
CDS GCA 72 bp GCACTCTGCAGAGCTGGTACCGCTTGGACGTGCCCGTaGAGGTCCTGTTCCCGGGGCCCGGGACGGACTTCC +
Preference number: 6 (lower is better)
Translates to: ALCRAGTAWTCP*RSCSRGPGRTS
Trigger: GGAAGTCCGTCCCGGGCCCCGGGAACAGGACCTGCACGGGCACGTCCAAGCGGTACCAGCTCTGCAGAGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS GCA 72 bp ACTCCTGCACTCTGCAGAGCTGGTACCGCTTGGACGTaGCCGTGCAGGTCCTGTTCCCGGGGCCCGGGACGG +
Preference number: 6 (lower is better)
Translates to: TPALCRAGTAWT*PCRSCSRGPGR
Trigger: CCGTCCCGGGCCCCGGGAACAGGACCTGCACGGGCACGTCCAAGCGGTACCAGCTCTGCAGAGTGCAGGAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS GCA 72 bp AGCCCTCTCCGCAGGTGCGCGAACACTCGCTCCAGCTaGTCGTCTCCCACCTGGGCTGGCACTCCCTCCCAG +
Preference number: 6 (lower is better)
Translates to: SPLRRCANTRSS*SSPTWAGTPSQ
Trigger: CTGGGAGGGAGTGCCAGCCCAGGTGGGAGACGAGCAGCTGGAGCGAGTGTTCGCGCACCTGCGGAGAGGGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS GCA 72 bp TTCTTGGCGAGCCCGCACTCGGGGCCACTGCGCGTCTaGGGCTTCCCGTTGGCCAGCTCCATGCAGAGCACC +
Preference number: 6 (lower is better)
Translates to: FLASPHSGPLRV*GFPLASSMQST
Trigger: GGTGCTCTGCATGGAGCTGGCCAACGGGAAGCCGCAGACGCGCAGTGGCCCCGAGTGCGGGCTCGCCAAGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS CCA 72 bp GCGGACACTCCTGCACTCTGCAGAGCTGGTACCGCTTaGACGTGCCCGTGCAGGTCCTGTTCCCGGGGCCCG +
Preference number: 6 (lower is better)
Translates to: ADTPALCRAGTA*TCPCRSCSRGP
Trigger: CGGGCCCCGGGAACAGGACCTGCACGGGCACGTCCAAGCGGTACCAGCTCTGCAGAGTGCAGGAGTGTCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS CCA 72 bp GATGTGCCGTCGCGGGCGGGGACCATGAGCTGCCGCTaGCCGTCCACGGTGGTACAGTGCAGGTCACACGGT +
Preference number: 6 (lower is better)
Translates to: DVPSRAGTMSCR*PSTVVQCRSHG
Trigger: ACCGTGTGACCTGCACTGTACCACCGTGGACGGCCAGCGGCAGCTCATGGTCCCCGCCCGCGACGGCACATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS CCA 72 bp GCCTCTCGAAACACGTGCTCTCCTCGGGAGGCTTCTTaGCGAGCCCGCACTCGGGGCCACTGCGCGTCTGCG +
Preference number: 6 (lower is better)
Translates to: ASRNTCSPREAS*RARTRGHCASA
Trigger: CGCAGACGCGCAGTGGCCCCGAGTGCGGGCTCGCCAAGAAGCCTCCCGAGGAGAGCACGTGTTTCGAGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS CCA 72 bp GGGGCCACATGTCGGGTGTCCAGACGGAGCAGCCGCTaGCCTGAGGTTACCGGGGAGGCTGGCGGTGGCAAA +
Preference number: 6 (lower is better)
Translates to: GATCRVSRRSSR*PEVTGEAGGGK
Trigger: TTTGCCACCGCCAGCCTCCCCGGTAACCTCAGGCCAGCGGCTGCTCCGTCTGGACACCCGACATGTGGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393061.7
CDS CAA 72 bp GGCGGACACTCCTGCACTCTGCAGAGCTGGTACCGCTaGGACGTGCCCGTGCAGGTCCTGTTCCCGGGGCCC +
Preference number: 6 (lower is better)
Translates to: GGHSCTLQSWYR*DVPVQVLFPGP
Trigger: GGGCCCCGGGAACAGGACCTGCACGGGCACGTCCAAGCGGTACCAGCTCTGCAGAGTGCAGGAGTGTCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS CAA 72 bp CCGTTGGCCAGCTCCATGCAGAGCACCAGCCGCTTCTaGACCCCGCGCCCGCAGGTGGTGTTGCACCGCTCC +
Preference number: 6 (lower is better)
Translates to: PLASSMQSTSRF*TPRPQVVLHRS
Trigger: GGAGCGGTGCAACACCACCTGCGGGCGCGGGGTCAAGAAGCGGCTGGTGCTCTGCATGGAGCTGGCCAACGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS CAA 72 bp CCGCACTCGGGGCCACTGCGCGTCTGCGGCTTCCCGTaGGCCAGCTCCATGCAGAGCACCAGCCGCTTCTTG +
Preference number: 6 (lower is better)
Translates to: PHSGPLRVCGFP*ASSMQSTSRFL
Trigger: CAAGAAGCGGCTGGTGCTCTGCATGGAGCTGGCCAACGGGAAGCCGCAGACGCGCAGTGGCCCCGAGTGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS CAA 72 bp GGCCTCTCGAAACACGTGCTCTCCTCGGGAGGCTTCTaGGCGAGCCCGCACTCGGGGCCACTGCGCGTCTGC +
Preference number: 6 (lower is better)
Translates to: GLSKHVLSSGGF*ASPHSGPLRVC
Trigger: GCAGACGCGCAGTGGCCCCGAGTGCGGGCTCGCCAAGAAGCCTCCCGAGGAGAGCACGTGTTTCGAGAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS CAA 90 bp TTGAAGCAGGGCCTCTCGAAACACGTGCTCTCCTCGGGAGGCTTCTaGGCGAGCCCGCACTCGGGGCCACTGCGCGTCTGCGGCTTCCCG +
Preference number: 6 (lower is better)
Translates to: LKQGLSKHVLSSGGF*ASPHSGPLRVCGFP
Trigger: CGGGAAGCCGCAGACGCGCAGTGGCCCCGAGTGCGGGCTCGCCAAGAAGCCTCCCGAGGAGAGCACGTGTTTCGAGAGGCCCTGCTTCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS GCA 72 bp TTGCAGGATGTGCCGTCGCGGGCGGGGACCATGAGCTaGCGCTGGCCGTCCACGGTGGTACAGTGCAGGTCA +
Preference number: 6 (lower is better)
Translates to: LQDVPSRAGTMS*RWPSTVVQCRS
Trigger: TGACCTGCACTGTACCACCGTGGACGGCCAGCGGCAGCTCATGGTCCCCGCCCGCGACGGCACATCCTGCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS GCA 72 bp AGCGCACGACGCGGAACTGGTAGCCCTCTCCGCAGGTaGGCGAACACTCGCTCCAGCTGCTCGTCTCCCACC +
Preference number: 6 (lower is better)
Translates to: SARRGTGSPLRR*ANTRSSCSSPT
Trigger: GGTGGGAGACGAGCAGCTGGAGCGAGTGTTCGCGCACCTGCGGAGAGGGCTACCAGTTCCGCGTCGTGCGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS GCA 72 bp GCAGGTCTTGCGTTCCTCGGGCCGCACGGCCTCGGCTaGCTCGCACAGGTCGCTGTACACGGAGCTGTCGAA +
Preference number: 6 (lower is better)
Translates to: AGLAFLGPHGLG*LAQVAVHGAVE
Trigger: TTCGACAGCTCCGTGTACAGCGACCTGTGCGAGGCAGCCGAGGCCGTGCGGCCCGAGGAACGCAAGACCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS CCA 72 bp TTGGCAGTGCACTCGGACCACTCCGACATCTCCCACTaGGGCCCGCAGGCGGGGTTCCGGCAGGTCTTGCGT +
Preference number: 6 (lower is better)
Translates to: LAVHSDHSDISH*GPQAGFRQVLR
Trigger: ACGCAAGACCTGCCGGAACCCCGCCTGCGGGCCCCAGTGGGAGATGTCGGAGTGGTCCGAGTGCACTGCCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS GCA 72 bp CGCCCGTTGTACACGTGGGAGTTGAAGGAGACGCACTaGTCCTCGCGGAAGCTCCTCCCGTCCGGCGGACAC +
Preference number: 6 (lower is better)
Translates to: RPLYTWELKETH*SSRKLLPSGGH
Trigger: GTGTCCGCCGGACGGGAGGAGCTTCCGCGAGGAGCAGTGCGTCTCCTTCAACTCCCACGTGTACAACGGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS GCA 72 bp TCCACCGGTACATGTCCGCGGGACTCACGCCTTGCTTaGGCGCCTTGGGCCTGGTCCTGGCCTTGTGAGTCC +
Preference number: 6 (lower is better)
Translates to: STGTCPRDSRLA*APWAWSWPCES
Trigger: GGACTCACAAGGCCAGGACCAGGCCCAAGGCGCGCAAGCAAGGCGTGAGTCCCGCGGACATGTACCGGTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS CCA 72 bp CTCCCGTCCGGCGGACACTCCTGCACTCTGCAGAGCTaGTACCGCTTGGACGTGCCCGTGCAGGTCCTGTTC +
Preference number: 6 (lower is better)
Translates to: LPSGGHSCTLQS*YRLDVPVQVLF
Trigger: GAACAGGACCTGCACGGGCACGTCCAAGCGGTACCAGCTCTGCAGAGTGCAGGAGTGTCCGCCGGACGGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS CCA 72 bp CCTGGCTCTCAGCGCTCTCGGAGAAGCCATAGTAGATaGGCTGGGGGCGGCTCTCGTGTGGCGGCTGCAGCA +
Preference number: 6 (lower is better)
Translates to: PGSQRSRRSHSR*AGGGSRVAAAA
Trigger: TGCTGCAGCCGCCACACGAGAGCCGCCCCCAGCCCATCTACTATGGCTTCTCCGAGAGCGCTGAGAGCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS CAA 72 bp GAGCTTCCACCGGTACATGTCCGCGGGACTCACGCCTaGCTTGCGCGCCTTGGGCCTGGTCCTGGCCTTGTG +
Preference number: 6 (lower is better)
Translates to: ELPPVHVRGTHA*LARLGPGPGLV
Trigger: CACAAGGCCAGGACCAGGCCCAAGGCGCGCAAGCAAGGCGTGAGTCCCGCGGACATGTACCGGTGGAAGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS CAA 90 bp AGTTGGTCGTGGTTGTCTGGCAGACCCTGGCTTCGGGTCAGCAGGTaGTCCTCCCAGAGAAAGGGGCGAGCGCTGCGGAGGGCAGACGGC +
Preference number: 6 (lower is better)
Translates to: SWSWLSGRPWLRVSR*SSQRKGRALRRADG
Trigger: GCCGTCTGCCCTCCGCAGCGCTCGCCCCTTTCTCTGGGAGGACAACCTGCTGACCCGAAGCCAGGGTCTGCCAGACAACCACGACCAACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS TCA 72 bp CTACCCGTCCGTCGCTGGTCTTGCAGTACACGTGCCTaGTGGTGCGGCCTTGCCCGCAGCTTCCACTGCACG +
Preference number: 6 (lower is better)
Translates to: LPVRRWSCSTRA*WCGLARSFHCT
Trigger: CGTGCAGTGGAAGCTGCGGGCAAGGCCGCACCATCAGGCACGTGTACTGCAAGACCAGCGACGGACGGGTAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS TCA 72 bp CGCAACCACGGACGATGTCGGTCCCCTGGTAGCACTTaGCGTCTCGCATCCTCACGCCCACCCCGCAGGTCT +
Preference number: 6 (lower is better)
Translates to: RNHGRCRSPGST*RLASSRPPRRS
Trigger: AGACCTGCGGGGTGGGCGTGAGGATGCGAGACGTCAAGTGCTACCAGGGGACCGACATCGTCCGTGGTTGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS GCA 72 bp GCTCCGTGGGGCAGGGCTGCAGATCACAGGCCTGTCTaGCAACGGGCTTCACCAACGGATCGCAACCACGGA +
Preference number: 6 (lower is better)
Translates to: APWGRAADHRPV*QRASPTDRNHG
Trigger: TCCGTGGTTGCGATCCGTTGGTGAAGCCCGTTGGCAGACAGGCCTGTGATCTGCAGCCCTGCCCCACGGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS CCA 72 bp AGCTCCGATCCTCTTCCAGATGACCAGGGTACGCTTTaGGAAGAGCCCTCGGGGCCCAGCCAGTGCCCAGGC +
Preference number: 6 (lower is better)
Translates to: SSDPLPDDQGTL*EEPSGPSQCPG
Trigger: GCCTGGGCACTGGCTGGGCCCCGAGGGCTCTTCCCAAAGCGTACCCTGGTCATCTGGAAGAGGATCGGAGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS CCA 72 bp GGCCGAGGTGAGCAGGCTGGTGCTAACGTTGGGGAATaGGGCCTCGGAGGAGCTGTTGGCAACCCTGTCGCT +
Preference number: 6 (lower is better)
Translates to: GRGEQAGANVGE*GLGGAVGNPVA
Trigger: AGCGACAGGGTTGCCAACAGCTCCTCCGAGGCCCCATTCCCCAACGTTAGCACCAGCCTGCTCACCTCGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS CCA 72 bp ATGACCCCTGTGGTGCAGGTGGCACTGCAGGGCTCGTaGGACGAGAGCTTCCACCGGTACATGTCCGCGGGA +
Preference number: 6 (lower is better)
Translates to: MTPVVQVALQGS*DESFHRYMSAG
Trigger: TCCCGCGGACATGTACCGGTGGAAGCTCTCGTCCCACGAGCCCTGCAGTGCCACCTGCACCACAGGGGTCAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS CAA 72 bp CTGTTCCCGGCCGAGGTGAGCAGGCTGGTGCTAACGTaGGGGAATGGGGCCTCGGAGGAGCTGTTGGCAACC +
Preference number: 6 (lower is better)
Translates to: LFPAEVSRLVLT*GNGASEELLAT
Trigger: GGTTGCCAACAGCTCCTCCGAGGCCCCATTCCCCAACGTTAGCACCAGCCTGCTCACCTCGGCCGGGAACAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS CAA 90 bp TACAGAGGCTTCCACTGGTGCGTCCGCCCGTTGTACACGTGGGAGTaGAAGGAGACGCACTGCTCCTCGCGGAAGCTCCTCCCGTCCGGC +
Preference number: 6 (lower is better)
Translates to: YRGFHWCVRPLYTWE*KETHCSSRKLLPSG
Trigger: GCCGGACGGGAGGAGCTTCCGCGAGGAGCAGTGCGTCTCCTTCAACTCCCACGTGTACAACGGGCGGACGCACCAGTGGAAGCCTCTGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS CAA 90 bp GTGGGACGAGAGCTTCCACCGGTACATGTCCGCGGGACTCACGCCTaGCTTGCGCGCCTTGGGCCTGGTCCTGGCCTTGTGAGTCCTGTT +
Preference number: 6 (lower is better)
Translates to: VGRELPPVHVRGTHA*LARLGPGPGLVSPV
Trigger: AACAGGACTCACAAGGCCAGGACCAGGCCCAAGGCGCGCAAGCAAGGCGTGAGTCCCGCGGACATGTACCGGTGGAAGCTCTCGTCCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS TCA 72 bp CTGTCACCACCAGGCCAGCTCCGATCCTCTTCCAGATaGCCAGGGTACGCTTTGGGAAGAGCCCTCGGGGCC +
Preference number: 6 (lower is better)
Translates to: LSPPGQLRSSSR*PGYALGRALGA
Trigger: GGCCCCGAGGGCTCTTCCCAAAGCGTACCCTGGTCATCTGGAAGAGGATCGGAGCTGGCCTGGTGGTGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS GCA 72 bp GGGCATTCCCCTTGCGATAGTTGCCCGTCACGTGGGTaGAGCTGCTACCGTCCCCCTGGCAGATGCCACACT +
Preference number: 6 (lower is better)
Translates to: GHSPCDSCPSRG*SCYRPPGRCHT
Trigger: AGTGTGGCATCTGCCAGGGGGACGGTAGCAGCTGCACCCACGTGACGGGCAACTATCGCAAGGGGAATGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS GCA 72 bp GGTACTACCCGTCCGTCGCTGGTCTTGCAGTACACGTaGCTGATGGTGCGGCCTTGCCCGCAGCTTCCACTG +
Preference number: 6 (lower is better)
Translates to: GTTRPSLVLQYT*LMVRPCPQLPL
Trigger: CAGTGGAAGCTGCGGGCAAGGCCGCACCATCAGGCACGTGTACTGCAAGACCAGCGACGGACGGGTAGTACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS CCA 72 bp TTCACTTTGATGGCCAGGGCACAGTTGGTGCCTGGCTaGTCCTGGCAGCTGTCATCTGGGGGCTCCGTGGGG +
Preference number: 6 (lower is better)
Translates to: FTLMARAQLVPG*SWQLSSGGSVG
Trigger: CCCCACGGAGCCCCCAGATGACAGCTGCCAGGACCAGCCAGGCACCAACTGTGCCCTGGCCATCAAAGTGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS CAA 72 bp TTTCCAGACACGCAAACCCCTCGCAGGTCAGTGAGCTaGCAGGATGTGCCGTCGCGGGCGGGGACCATGAGC +
Preference number: 6 (lower is better)
Translates to: FPDTQTPRRSVS*QDVPSRAGTMS
Trigger: GCTCATGGTCCCCGCCCGCGACGGCACATCCTGCAAGCTCACTGACCTGCGAGGGGTTTGCGTGTCTGGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS CAA 90 bp ACCCCGCAGGTCTTGGTGCACTCTGACCAGGGGCTGGTGTACCACTaGAAGCAGGGCCTCTCGAAACACGTGCTCTCCTCGGGAGGCTTC +
Preference number: 6 (lower is better)
Translates to: TPQVLVHSDQGLVYH*KQGLSKHVLSSGGF
Trigger: GAAGCCTCCCGAGGAGAGCACGTGTTTCGAGAGGCCCTGCTTCAAGTGGTACACCAGCCCCTGGTCAGAGTGCACCAAGACCTGCGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS TCA 72 bp CAACCCTGTCGCTGCTCAGCTCCAGGTAGGACCCGTTaGGCAGGTAAGGGCCAGCCCCCTCGTTCTCCTCAT +
Preference number: 6 (lower is better)
Translates to: QPCRCSAPGRTR*AGKGQPPRSPH
Trigger: ATGAGGAGAACGAGGGGGCTGGCCCTTACCTGCTCAACGGGTCCTACCTGGAGCTGAGCAGCGACAGGGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS GCA 72 bp TCCCCTTGCGATAGTTGCCCGTCACGTGGGTGCAGCTaGTACCGTCCCCCTGGCAGATGCCACACTTGTCCA +
Preference number: 6 (lower is better)
Translates to: SPCDSCPSRGCS*YRPPGRCHTCP
Trigger: TGGACAAGTGTGGCATCTGCCAGGGGGACGGTAGCAGCTGCACCCACGTGACGGGCAACTATCGCAAGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS CCA 72 bp AGAGGCTTCCACTGGTGCGTCCGCCCGTTGTACACGTaGGAGTTGAAGGAGACGCACTGCTCCTCGCGGAAG +
Preference number: 6 (lower is better)
Translates to: RGFHWCVRPLYT*ELKETHCSSRK
Trigger: CTTCCGCGAGGAGCAGTGCGTCTCCTTCAACTCCCACGTGTACAACGGGCGGACGCACCAGTGGAAGCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS CCA 72 bp GAAGCCATAGTAGATGGGCTGGGGGCGGCTCTCGTGTaGCGGCTGCAGCAGCGTGTACTCGAAGGTGATGGA +
Preference number: 6 (lower is better)
Translates to: EAIVDGLGAALV*RLQQRVLEGDG
Trigger: TCCATCACCTTCGAGTACACGCTGCTGCAGCCGCCACACGAGAGCCGCCCCCAGCCCATCTACTATGGCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS CCA 72 bp CACACAGCTTCTCATCCTCCGAGCAGCGGATGTCCCTaGTCACCACACTGCGCTCCCCACACTTGGCAGTGC +
Preference number: 6 (lower is better)
Translates to: HTASHPPSSGCP*SPHCAPHTWQC
Trigger: GCACTGCCAAGTGTGGGGAGCGCAGTGTGGTGACCAGGGACATCCGCTGCTCGGAGGATGAGAAGCTGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS CAA 72 bp TTCCACTGGTGCGTCCGCCCGTTGTACACGTGGGAGTaGAAGGAGACGCACTGCTCCTCGCGGAAGCTCCTC +
Preference number: 6 (lower is better)
Translates to: FHWCVRPLYTWE*KETHCSSRKLL
Trigger: GAGGAGCTTCCGCGAGGAGCAGTGCGTCTCCTTCAACTCCCACGTGTACAACGGGCGGACGCACCAGTGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS CAA 72 bp TCCGGGTACAGAGGCTTCCACTGGTGCGTCCGCCCGTaGTACACGTGGGAGTTGAAGGAGACGCACTGCTCC +
Preference number: 6 (lower is better)
Translates to: SGYRGFHWCVRP*YTWELKETHCS
Trigger: GGAGCAGTGCGTCTCCTTCAACTCCCACGTGTACAACGGGCGGACGCACCAGTGGAAGCCTCTGTACCCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS CAA 72 bp TGGGAGGCGAAGTGGGTGTCAACCTCTTCGTCATCCTaGTCCCCGGTGAGAGGAGTCCCCGTGACGTTGCGG +
Preference number: 6 (lower is better)
Translates to: WEAKWVSTSSSS*SPVRGVPVTLR
Trigger: CCGCAACGTCACGGGGACTCCTCTCACCGGGGACAAGGATGACGAAGAGGTTGACACCCACTTCGCCTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS GCA 72 bp GAGAGTAACCAAGGTGGGCATTCCCCTTGCGATAGTTaGCCGTCACGTGGGTGCAGCTGCTACCGTCCCCCT +
Preference number: 6 (lower is better)
Translates to: ESNQGGHSPCDS*PSRGCSCYRPP
Trigger: AGGGGGACGGTAGCAGCTGCACCCACGTGACGGGCAACTATCGCAAGGGGAATGCCCACCTTGGTTACTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354484.8
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS CCA 72 bp CCCGGCACTTGTAGGGGTGTTGCAGCCGTATGGCCCTaGTGCTGGAGACACCACCTGCCTTTAGAAGGGGAT +
Preference number: 6 (lower is better)
Translates to: PGTCRGVAAVWP*CWRHHLPLEGD
Trigger: ATCCCCTTCTAAAGGCAGGTGGTGTCTCCAGCACCAGGGCCATACGGCTGCAACACCCCTACAAGTGCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354484.8
CDS CCA 72 bp GCCCAGGCCTCAAGGTTATCTGGGACTAGTTGGTCGTaGTTGTCTGGCAGACCCTGGCTTCGGGTCAGCAGG +
Preference number: 6 (lower is better)
Translates to: AQASRLSGTSWS*LSGRPWLRVSR
Trigger: CCTGCTGACCCGAAGCCAGGGTCTGCCAGACAACCACGACCAACTAGTCCCAGATAACCTTGAGGCCTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393060.1
ENST00000393061.7
ENST00000651351.2
CDS CCA 72 bp GCCAGTGCCCAGGCCTCAAGGTTATCTGGGA