RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADAMTSL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000178031

Ensembl transcript IDs: ENST00000276935.6, ENST00000327883.11, ENST00000380538.4, ENST00000380545.9, ENST00000380548.9, ENST00000380559.7, ENST00000380566.8, ENST00000380570.8, ENST00000388710.8, ENST00000431052.6, ENST00000489062.2, ENST00000496521.2, ENST00000542621.5, ENST00000546040.1, ENST00000680146.1

Found 1505 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCAGTTGGCAGGCCGGGGCCCCCAGGAGCACAGGTGCTCAGGCACTaGCTTGTTGGTGCGGGCATGCACACACTCCACACGCCGGGACTG +
Preference number: 1 (lower is better)
Translates to: PVGRPGPPGAQVLRH*LVGAGMHTLHTPGL
Trigger: CAGTCCCGGCGTGTGGAGTGTGTGCATGCCCGCACCAACAAGGCAGTGCCTGAGCACCTGTGCTCCTGGGGGCCCCGGCCTGCCAACTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542621.5
3UTR CCA 90 bp CAGGCCGGGGCCCCCAGGAGCACAGGTGCTCAGGCACTGCCTTGTTaGTGCGGGCATGCACACACTCCACACGCCGGGACTGGAAGCCGT +
Preference number: 1 (lower is better)
Translates to: QAGAPRSTGAQALPC*CGHAHTPHAGTGSR
Trigger: ACGGCTTCCAGTCCCGGCGTGTGGAGTGTGTGCATGCCCGCACCAACAAGGCAGTGCCTGAGCACCTGTGCTCCTGGGGGCCCCGGCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542621.5
3UTR GCA 90 bp TTGCAGCGCTGCCAGTTGGCAGGCCGGGGCCCCCAGGAGCACAGGTaGTCAGGCACTGCCTTGTTGGTGCGGGCATGCACACACTCCACA +
Preference number: 1 (lower is better)
Translates to: LQRCQLAGRGPQEHR*SGTALLVRACTHST
Trigger: TGTGGAGTGTGTGCATGCCCGCACCAACAAGGCAGTGCCTGAGCACCTGTGCTCCTGGGGGCCCCGGCCTGCCAACTGGCAGCGCTGCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542621.5
3UTR TCA 90 bp TGCTCCAGCCGCCTCACCACAGCTGATGAGTGTGGCTGCAGTGTGTaGGCTGCTTTGCCAGGGTGCTGCCTCCACCACCCCGCCTTGCTA +
Preference number: 1 (lower is better)
Translates to: CSSRLTTADECGCSV*AALPGCCLHHPALL
Trigger: TAGCAAGGCGGGGTGGTGGAGGCAGCACCCTGGCAAAGCAGCTCACACACTGCAGCCACACTCATCAGCTGTGGTGAGGCGGCTGGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR GCA 90 bp GTTGACTCTGATAGCTTGGGAAGTGGGGACTCCCACGCAGCGCAGTaGTCTGTTGTGGGCAGCAGGGCTCTGAGCATGCGCACATGCATG +
Preference number: 1 (lower is better)
Translates to: VDSDSLGSGDSHAAQ*SVVGSRALSMRTCM
Trigger: CATGCATGTGCGCATGCTCAGAGCCCTGCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTCCCCACTTCCCAAGCTATCAGAGTCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR CCA 90 bp TGGCTTTGCTGCAGCTGCACAGGCAGGACGTTGACTCTGATAGCTTaGGAAGTGGGGACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCA +
Preference number: 1 (lower is better)
Translates to: WLCCSCTGRTLTLIA*EVGTPTQRSALLWA
Trigger: TGCCCACAACAGAGCACTGCGCTGCGTGGGAGTCCCCACTTCCCAAGCTATCAGAGTCAACGTCCTGCCTGTGCAGCTGCAGCAAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR CCA 90 bp GAGGTGCCAGGGTGGCCTTACTGCATGGCGAGACCCACCTCTCACTaGCTTTGCTGCAGCTGCACAGGCAGGACGTTGACTCTGATAGCT +
Preference number: 1 (lower is better)
Translates to: EVPGWPYCMARPTSH*LCCSCTGRTLTLIA
Trigger: AGCTATCAGAGTCAACGTCCTGCCTGTGCAGCTGCAGCAAAGCCAGTGAGAGGTGGGTCTCGCCATGCAGTAAGGCCACCCTGGCACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR CCA 90 bp GAGTGGCATTTCATGAGGGGAGGCTTATCTGTGGGTAAGGGACTCTaGCCACCCTTGCTCCTAAACTCAGGCCACGCGAGGGAAGGAGGC +
Preference number: 1 (lower is better)
Translates to: EWHFMRGGLSVGKGL*PPLLLNSGHAREGG
Trigger: GCCTCCTTCCCTCGCGTGGCCTGAGTTTAGGAGCAAGGGTGGCCAGAGTCCCTTACCCACAGATAAGCCTCCCCTCATGAAATGCCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR GCA 90 bp CCTTACTGCATGGCGAGACCCACCTCTCACTGGCTTTGCTGCAGCTaGACAGGCAGGACGTTGACTCTGATAGCTTGGGAAGTGGGGACT +
Preference number: 1 (lower is better)
Translates to: PYCMARPTSHWLCCS*TGRTLTLIAWEVGT
Trigger: AGTCCCCACTTCCCAAGCTATCAGAGTCAACGTCCTGCCTGTGCAGCTGCAGCAAAGCCAGTGAGAGGTGGGTCTCGCCATGCAGTAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR CCA 90 bp GGTGTACTGTGGACACGCATAAACCCATTGTCCCACCCCGGTCCCTaGGCCAGCTCTGGAATGAAGAGGTTGCTACAACCTGACAGCCTG +
Preference number: 1 (lower is better)
Translates to: GVLWTRINPLSHPGP*ASSGMKRLLQPDSL
Trigger: CAGGCTGTCAGGTTGTAGCAACCTCTTCATTCCAGAGCTGGCCCAGGGACCGGGGTGGGACAATGGGTTTATGCGTGTCCACAGTACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR GCA 90 bp GGAGGGAGGAAGCTCTTCAAGGGAGCCCCCACTGTCTGCCTGGCCTaGTCTGCAACCTCCTTTAGACATCTGTCCTTTCCTTTCCCAACA +
Preference number: 1 (lower is better)
Translates to: GGRKLFKGAPTVCLA*SATSFRHLSFPFPT
Trigger: TGTTGGGAAAGGAAAGGACAGATGTCTAAAGGAGGTTGCAGAGCAGGCCAGGCAGACAGTGGGGGCTCCCTTGAAGAGCTTCCTCCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR GCA 90 bp TGCTTCCCACCCAAACCTAGGTTCTGCCAGCTCACTGAGACCCACTaGCAACTGCTCCAACCCAACATGGAGCTGGAGGATGCTTGCTCT +
Preference number: 1 (lower is better)
Translates to: CFPPKPRFCQLTETH*QLLQPNMELEDACS
Trigger: AGAGCAAGCATCCTCCAGCTCCATGTTGGGTTGGAGCAGTTGGCAGTGGGTCTCAGTGAGCTGGCAGAACCTAGGTTTGGGTGGGAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
3UTR CCA 90 bp CTGGCTGGAAATGCAGCCCTGATGTCAATGGTAGCCCGGGGTGAGTaGCATTTCATGAGGGGAGGCTTATCTGTGGGTAAGGGACTCTGG +
Preference number: 1 (lower is better)
Translates to: LAGNAALMSMVARGE*HFMRGGLSVGKGLW
Trigger: CCAGAGTCCCTTACCCACAGATAAGCCTCCCCTCATGAAATGCCACTCACCCCGGGCTACCATTGACATCAGGGCTGCATTTCCAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR TCA 90 bp TGCTCACAGGCCTCGGAAGAGCACTGCACTGCTCTGATGGTAAGGTaGTGCCATCCCGTGTCTGGCAGAAGACTTGTCTGTGTTGCACAG +
Preference number: 1 (lower is better)
Translates to: CSQASEEHCTALMVR*CHPVSGRRLVCVAQ
Trigger: CTGTGCAACACAGACAAGTCTTCTGCCAGACACGGGATGGCATCACCTTACCATCAGAGCAGTGCAGTGCTCTTCCGAGGCCTGTGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542621.5
3UTR TCA 90 bp GCCTCAGAAGGACAGGCTTCCTCTTTGGGACTGCAGCTGGTAACCTaGCTTGTCCCACCTAAGCTAATTCACATGCCAGAGCATGAAGCC +
Preference number: 1 (lower is better)
Translates to: ASEGQASSLGLQLVT*LVPPKLIHMPEHEA
Trigger: GGCTTCATGCTCTGGCATGTGAATTAGCTTAGGTGGGACAAGTCAGGTTACCAGCTGCAGTCCCAAAGAGGAAGCCTGTCCTTCTGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380570.8
3UTR GCA 90 bp CATTTCATGCAACGAGCATTCTGCTTCCCACCCAAACCTAGGTTCTaGCAGCTCACTGAGACCCACTGCCAACTGCTCCAACCCAACATG +
Preference number: 1 (lower is better)
Translates to: HFMQRAFCFPPKPRF*QLTETHCQLLQPNM
Trigger: CATGTTGGGTTGGAGCAGTTGGCAGTGGGTCTCAGTGAGCTGGCAGAACCTAGGTTTGGGTGGGAAGCAGAATGCTCGTTGCATGAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
3UTR CCA 90 bp TTCTTCTCTCTCTGCACTCACCCACTAGAAGAACTGAGTGAGTTCTaGGCTAGTTTCTGCCTCAGCATGGTGTCCCCTCCCCATTTGTCC +
Preference number: 1 (lower is better)
Translates to: FFSLCTHPLEELSEF*ASFCLSMVSPPHLS
Trigger: GGACAAATGGGGAGGGGACACCATGCTGAGGCAGAAACTAGCCCAGAACTCACTCAGTTCTTCTAGTGGGTGAGTGCAGAGAGAGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR GCA 90 bp GTCCCAGCAGTTTTAAGCAAGTCCCAGGCACTGACTCCTCGGCACTaGCTCAGCATTTGGGTGTTGTTACAACACAGGAATGTGGTTAGA +
Preference number: 1 (lower is better)
Translates to: VPAVLSKSQALTPRH*LSIWVLLQHRNVVR
Trigger: TCTAACCACATTCCTGTGTTGTAACAACACCCAAATGCTGAGGCAGTGCCGAGGAGTCAGTGCCTGGGACTTGCTTAAAACTGCTGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
3UTR CCA 90 bp GCTTTGCCACAAGTTCCACAGCAGCGAGATTTAAACTGGCTGAGTTaGCAGAGTTTCAGCTGTTTCACCTTCTCGCAGTACCTGGTGGTG +
Preference number: 1 (lower is better)
Translates to: ALPQVPQQRDLNWLS*QSFSCFTFSQYLVV
Trigger: CACCACCAGGTACTGCGAGAAGGTGAAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAATCTCGCTGCTGTGGAACTTGTGGCAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
3UTR TCA 90 bp AGACATCTGTCCTTTCCTTTCCCAACATCCTGTCCTCCAGCTAACTaGAAGAGAAAACACGCGGACGTCCTTATGCTTGAAGGTGGAGGT +
Preference number: 1 (lower is better)
Translates to: RHLSFPFPTSCPPAN*KRKHADVLMLEGGG
Trigger: ACCTCCACCTTCAAGCATAAGGACGTCCGCGTGTTTTCTCTTTCAGTTAGCTGGAGGACAGGATGTTGGGAAAGGAAAGGACAGATGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR CCA 90 bp TTAAGCAAGTCCCAGGCACTGACTCCTCGGCACTGCCTCAGCATTTaGGTGTTGTTACAACACAGGAATGTGGTTAGAAAGACCCTTTTG +
Preference number: 1 (lower is better)
Translates to: LSKSQALTPRHCLSI*VLLQHRNVVRKTLL
Trigger: CAAAAGGGTCTTTCTAACCACATTCCTGTGTTGTAACAACACCCAAATGCTGAGGCAGTGCCGAGGAGTCAGTGCCTGGGACTTGCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
3UTR CCA 90 bp TATCTTCACGCTTTGCCACAAGTTCCACAGCAGCGAGATTTAAACTaGCTGAGTTGGCAGAGTTTCAGCTGTTTCACCTTCTCGCAGTAC +
Preference number: 1 (lower is better)
Translates to: YLHALPQVPQQRDLN*LSWQSFSCFTFSQY
Trigger: GTACTGCGAGAAGGTGAAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAATCTCGCTGCTGTGGAACTTGTGGCAAAGCGTGAAGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
3UTR TCA 90 bp CTGTATACATTGAACACCAGGAGAAGGGAAGGAGAGATTTTTCTCTaGCATCAGAGTGAGATATTCCACAGGAAAGGCACCTCTATACAA +
Preference number: 1 (lower is better)
Translates to: LYTLNTRRREGEIFL*HQSEIFHRKGTSIQ
Trigger: TTGTATAGAGGTGCCTTTCCTGTGGAATATCTCACTCTGATGTCAGAGAAAAATCTCTCCTTCCCTTCTCCTGGTGTTCAATGTATACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276935.6
3UTR TCA 90 bp GAACACCAGGAGAAGGGAAGGAGAGATTTTTCTCTGACATCAGAGTaGGATATTCCACAGGAAAGGCACCTCTATACAATTATCATTTTT +
Preference number: 1 (lower is better)
Translates to: EHQEKGRRDFSLTSE*DIPQERHLYTIIIF
Trigger: AAAAATGATAATTGTATAGAGGTGCCTTTCCTGTGGAATATCTCACTCTGATGTCAGAGAAAAATCTCTCCTTCCCTTCTCCTGGTGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276935.6
3UTR CAA 90 bp GCAGGCCGGGGCCCCCAGGAGCACAGGTGCTCAGGCACTGCCTTGTaGGTGCGGGCATGCACACACTCCACACGCCGGGACTGGAAGCCG +
Preference number: 2 (lower is better)
Translates to: AGRGPQEHRCSGTAL*VRACTHSTRRDWKP
Trigger: CGGCTTCCAGTCCCGGCGTGTGGAGTGTGTGCATGCCCGCACCAACAAGGCAGTGCCTGAGCACCTGTGCTCCTGGGGGCCCCGGCCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542621.5
3UTR CAA 90 bp TTGGCAGGCCGGGGCCCCCAGGAGCACAGGTGCTCAGGCACTGCCTaGTTGGTGCGGGCATGCACACACTCCACACGCCGGGACTGGAAG +
Preference number: 2 (lower is better)
Translates to: LAGRGPQEHRCSGTA*LVRACTHSTRRDWK
Trigger: CTTCCAGTCCCGGCGTGTGGAGTGTGTGCATGCCCGCACCAACAAGGCAGTGCCTGAGCACCTGTGCTCCTGGGGGCCCCGGCCTGCCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542621.5
3UTR-3UTR TCA 90 bp AGCACAGGTGCTCAGGCACTGCCTTGTTGGTGCGGGCATGCACACACTCCACACTCCGAGGTGGTTGCGTaGGTCCTTCGTGTGGCCAGG +
Preference number: 2 (lower is better)
Translates to: STGAQALPCWCGHAHTPHSEVVA*VLRVAR
Trigger: CCTGGCCACACGAAGGACTCACGCAACCACCTCGGA...GTGTGGAGTGTGTGCATGCCCGCACCAACAAGGCAGTGCCTGAGCACCTGTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542621.5
3UTR-3UTR GCA 90 bp CCATTGTCCCACCCCGGTCCCTGGGCCAGCTCTGGAATGAAGAGGTTGCTACAAAGCCCCTGCTCACCCTaGCCCACTGGGGAACACCAC +
Preference number: 2 (lower is better)
Translates to: PLSHPGPWASSGMKRLLQSPCSP*PTGEHH
Trigger: GTGGTGTTCCCCAGTGGGGCAGGGTGAGCAGGGGCT...TTGTAGCAACCTCTTCATTCCAGAGCTGGCCCAGGGACCGGGGTGGGACAATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR-3UTR CCA 90 bp TGGCAGAGTTTCAGCTGTTTCACCTTCTCGCAGTACCTGGTGGTGTCTCTGCACTGCAGCGCTGCCAGTTaGCAGGCCGGGGCCCCCAGG +
Preference number: 2 (lower is better)
Translates to: WQSFSCFTFSQYLVVSLHCSAAS*QAGAPR
Trigger: CCTGGGGGCCCCGGCCTGCCAACTGGCAGCGCTGCA...GTGCAGAGACACCACCAGGTACTGCGAGAAGGTGAAACAGCTGAAACTCTGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
3UTR CAA 90 bp CTGGCTTTGCTGCAGCTGCACAGGCAGGACGTTGACTCTGATAGCTaGGGAAGTGGGGACTCCCACGCAGCGCAGTGCTCTGTTGTGGGC +
Preference number: 2 (lower is better)
Translates to: LALLQLHRQDVDSDS*GSGDSHAAQCSVVG
Trigger: GCCCACAACAGAGCACTGCGCTGCGTGGGAGTCCCCACTTCCCAAGCTATCAGAGTCAACGTCCTGCCTGTGCAGCTGCAGCAAAGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR-3UTR TCA 90 bp TGGGGACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCAGGGCTCTGAGCATATCAGAGCTGGTCCATaGGCCTCATGCAGCCTGGAA +
Preference number: 2 (lower is better)
Translates to: WGLPRSAVLCCGQQGSEHIRAGP*ASCSLE
Trigger: TTCCAGGCTGCATGAGGCTCATGGACCAGCTCTGAT...ATGCTCAGAGCCCTGCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR-3UTR GCA 90 bp TGCTGCCTCCACCACCCCGCCTTGCTAGATAAATACTACATGCCGGAGGACCTGGGAGCCCCCACTGTCTaGCTGGCCTGCTCTGCAACC +
Preference number: 2 (lower is better)
Translates to: CCLHHPALLDKYYMPEDLGAPTV*LACSAT
Trigger: GGTTGCAGAGCAGGCCAGGCAGACAGTGGGGGCTCC...CAGGTCCTCCGGCATGTAGTATTTATCTAGCAAGGCGGGGTGGTGGAGGCAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR-3UTR GCA 90 bp GGAGAGGGAGGGTGTACTGTGGACACGCATAAACCCATTGTCCCACCCCGGTCCCAGGTGCTCAGGCACTaGCTTGTTGGTGCGGGCATG +
Preference number: 2 (lower is better)
Translates to: GEGGCTVDTHKPIVPPRSQVLRH*LVGAGM
Trigger: CATGCCCGCACCAACAAGGCAGTGCCTGAGCACCTG...GGACCGGGGTGGGACAATGGGTTTATGCGTGTCCACAGTACACCCTCCCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542621.5
3UTR-3UTR CCA 90 bp CCAGGGTGGCCTTACTGCATGGCGAGACCCACCTCTCACTGGCTTTGCTGCAGCTCCCTGGCCCTTCGGTaGAGCAGCAAAGGTCCTAGA +
Preference number: 2 (lower is better)
Translates to: PGWPYCMARPTSHWLCCSSLALR*SSKGPR
Trigger: TCTAGGACCTTTGCTGCTCCACCGAAGGGCCAGGGA...GCTGCAGCAAAGCCAGTGAGAGGTGGGTCTCGCCATGCAGTAAGGCCACCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR CAA 90 bp AGACCCACCTCTCACTGGCTTTGCTGCAGCTGCACAGGCAGGACGTaGACTCTGATAGCTTGGGAAGTGGGGACTCCCACGCAGCGCAGT +
Preference number: 2 (lower is better)
Translates to: RPTSHWLCCSCTGRT*TLIAWEVGTPTQRS
Trigger: ACTGCGCTGCGTGGGAGTCCCCACTTCCCAAGCTATCAGAGTCAACGTCCTGCCTGTGCAGCTGCAGCAAAGCCAGTGAGAGGTGGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR CAA 90 bp GCCAGGGTGGCCTTACTGCATGGCGAGACCCACCTCTCACTGGCTTaGCTGCAGCTGCACAGGCAGGACGTTGACTCTGATAGCTTGGGA +
Preference number: 2 (lower is better)
Translates to: ARVALLHGETHLSLA*LQLHRQDVDSDSLG
Trigger: TCCCAAGCTATCAGAGTCAACGTCCTGCCTGTGCAGCTGCAGCAAAGCCAGTGAGAGGTGGGTCTCGCCATGCAGTAAGGCCACCCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR-3UTR TCA 90 bp TGGGGACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCAGGGCTCTGAGCATCTCTTTCTAGGTCTTTaGGACCCAGGTTTGGGAGGG +
Preference number: 2 (lower is better)
Translates to: WGLPRSAVLCCGQQGSEHLFLGL*DPGLGG
Trigger: CCCTCCCAAACCTGGGTCTCAAAGACCTAGAAAGAG...ATGCTCAGAGCCCTGCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR-3UTR GCA 90 bp GGAGAGGGAGGGTGTACTGTGGACACGCATAAACCCATTGTCCCACCCCGGTCCTCTGTCCGAGGTGGTTaGGTGAGTCCTTCGTGTGGC +
Preference number: 2 (lower is better)
Translates to: GEGGCTVDTHKPIVPPRSSVRGG*VSPSCG
Trigger: GCCACACGAAGGACTCACGCAACCACCTCGGACAGA...GGACCGGGGTGGGACAATGGGTTTATGCGTGTCCACAGTACACCCTCCCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR-3UTR GCA 90 bp CCTCCTTCCACATTAGCCAGCAGCCTTCATTGTCTTGTGGTGCTGCTGAGTTGCCAGCCTGGAAGCCCCTaGTCACCCTGCCCCACTGGG +
Preference number: 2 (lower is better)
Translates to: PPSTLASSLHCLVVLLSCQPGSP*SPCPTG
Trigger: CCCAGTGGGGCAGGGTGAGCAGGGGCTTCCAGGCTG...GCAACTCAGCAGCACCACAAGACAATGAAGGCTGCTGGCTAATGTGGAAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380548.9
3UTR-3UTR GCA 90 bp CCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTTCACGCTTTGCCGTGATGTTGCAGCGCTaGCAGTTGGCAGGCCGGGGC +
Preference number: 2 (lower is better)
Translates to: PSCGQGRVFPHTLSSRFAVMLQR*QLAGRG
Trigger: GCCCCGGCCTGCCAACTGGCAGCGCTGCAACATCAC...GGCAAAGCGTGAAGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
3UTR-3UTR GCA 90 bp CCATTGTCCCACCCCGGTCCCTGGGCCAGCTCTGGAATGAAGAGGTTGCTACAATTGTTGGTGCGGGCATaGACACACTCCACACGCCGG +
Preference number: 2 (lower is better)
Translates to: PLSHPGPWASSGMKRLLQLLVRA*THSTRR
Trigger: CCGGCGTGTGGAGTGTGTGCATGCCCGCACCAACAA...TTGTAGCAACCTCTTCATTCCAGAGCTGGCCCAGGGACCGGGGTGGGACAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542621.5
3UTR-3UTR CCA 90 bp TGGGGACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCAGGGCTCTGAGCATTGCTCAAAATGGCCCTaGCCCACAGCAGCAGTTAGT +
Preference number: 2 (lower is better)
Translates to: WGLPRSAVLCCGQQGSEHCSKWP*PTAAVS
Trigger: ACTAACTGCTGCTGTGGGCCAGGGCCATTTTGAGCA...ATGCTCAGAGCCCTGCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR-3UTR TCA 90 bp GAGAGGGAGGGTGTACTGTGGACACGCATAAACCCATTGTCCCACCCCGGTCCCATCAGAGCTGGTCCATaGGCCTCATGCAGCCTGGAA +
Preference number: 2 (lower is better)
Translates to: EREGVLWTRINPLSHPGPIRAGP*ASCSLE
Trigger: TTCCAGGCTGCATGAGGCTCATGGACCAGCTCTGAT...GGGACCGGGGTGGGACAATGGGTTTATGCGTGTCCACAGTACACCCTCCCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR-3UTR TCA 90 bp CCAGGGTGGCCTTACTGCATGGCGAGACCCACCTCTCACTGGCTTTGCTGCAGCTGTTTTCACATGGGGTaGTGTTGCAGCGCTGCCAGT +
Preference number: 2 (lower is better)
Translates to: PGWPYCMARPTSHWLCCSCFHMG*CCSAAS
Trigger: ACTGGCAGCGCTGCAACATCACCCCATGTGAAAACA...GCTGCAGCAAAGCCAGTGAGAGGTGGGTCTCGCCATGCAGTAAGGCCACCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542621.5
3UTR CAA 90 bp CCATTGTCCCACCCCGGTCCCTGGGCCAGCTCTGGAATGAAGAGGTaGCTACAACCTGACAGCCTGACAGATACTCTCTGGCACAGTGAC +
Preference number: 2 (lower is better)
Translates to: PLSHPGPWASSGMKR*LQPDSLTDTLWHSD
Trigger: GTCACTGTGCCAGAGAGTATCTGTCAGGCTGTCAGGTTGTAGCAACCTCTTCATTCCAGAGCTGGCCCAGGGACCGGGGTGGGACAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR-3UTR GCA 90 bp ATGAAGAGGTTGCTACAACCTGACAGCCTGACAGATACTCTCTGGCACAGTGACGCTGCTTTGCCAGGGTaGTGCCTCCACCACCCCGCC +
Preference number: 2 (lower is better)
Translates to: MKRLLQPDSLTDTLWHSDAALPG*CLHHPA
Trigger: GGCGGGGTGGTGGAGGCAGCACCCTGGCAAAGCAGC...GTCACTGTGCCAGAGAGTATCTGTCAGGCTGTCAGGTTGTAGCAACCTCTTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR-3UTR CCA 90 bp GAGTGGCATTTCATGAGGGGAGGCTTATCTGTGGGTAAGGGACTCTGGCCACCCAGGCTACAAACCTTCTaGCTCCCTGCTGTCCGCAGG +
Preference number: 2 (lower is better)
Translates to: EWHFMRGGLSVGKGLWPPRLQTF*LPAVRR
Trigger: CCTGCGGACAGCAGGGAGCCAGAAGGTTTGTAGCCT...GGGTGGCCAGAGTCCCTTACCCACAGATAAGCCTCCCCTCATGAAATGCCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR-3UTR CCA 90 bp TGCTGCCTCCACCACCCCGCCTTGCTAGATAAATACTACATGCCGGAGGACCTGTCCCTGGCCCTTCGGTaGAGCAGCAAAGGTCCTAGA +
Preference number: 2 (lower is better)
Translates to: CCLHHPALLDKYYMPEDLSLALR*SSKGPR
Trigger: TCTAGGACCTTTGCTGCTCCACCGAAGGGCCAGGGA...CAGGTCCTCCGGCATGTAGTATTTATCTAGCAAGGCGGGGTGGTGGAGGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR-3UTR CCA 90 bp TGGGCCAGCTCTGGAATGAAGAGGTTGCTACAACCTGACAGCCTGACAGATACTAGGACCTGCAGACCCTaGGGTGGAGGCTGGGAGAGG +
Preference number: 2 (lower is better)
Translates to: WASSGMKRLLQPDSLTDTRTCRP*GGGWER
Trigger: CCTCTCCCAGCCTCCACCCCAGGGTCTGCAGGTCCT...AGTATCTGTCAGGCTGTCAGGTTGTAGCAACCTCTTCATTCCAGAGCTGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR-3UTR TCA 90 bp GAGAGGGAGGGTGTACTGTGGACACGCATAAACCCATTGTCCCACCCCGGTCCCGAGGTTGCTACAACCTaGCAGCCTGACAGATACTCT +
Preference number: 2 (lower is better)
Translates to: EREGVLWTRINPLSHPGPEVATT*QPDRYS
Trigger: AGAGTATCTGTCAGGCTGTCAGGTTGTAGCAACCTC...GGGACCGGGGTGGGACAATGGGTTTATGCGTGTCCACAGTACACCCTCCCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR-3UTR GCA 90 bp TGCTGCCTCCACCACCCCGCCTTGCTAGATAAATACTACATGCCGGAGGACCTGCTGAGCATGCGCACATaGATGGGATCAGAGCTGGTC +
Preference number: 2 (lower is better)
Translates to: CCLHHPALLDKYYMPEDLLSMRT*MGSELV
Trigger: GACCAGCTCTGATCCCATGCATGTGCGCATGCTCAG...CAGGTCCTCCGGCATGTAGTATTTATCTAGCAAGGCGGGGTGGTGGAGGCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR-3UTR CCA 90 bp CCCATTGTCCCACCCCGGTCCCTGGGCCAGCTCTGGAATGAAGAGGTTGCTACATTTGAGACCCAGGTTTaGGAGGGAGGAAGCTCTTCA +
Preference number: 2 (lower is better)
Translates to: PIVPPRSLGQLWNEEVATFETQV*EGGSSS
Trigger: TGAAGAGCTTCCTCCCTCCCAAACCTGGGTCTCAAA...TGTAGCAACCTCTTCATTCCAGAGCTGGCCCAGGGACCGGGGTGGGACAATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR-3UTR CCA 90 bp AGATTTAAACTGGCTGAGTTGGCAGAGTTTCAGCTGTTTCACCTTCTCGCAGTATGCAGCGCTGCCAGTTaGCAGGCCGGGGCCCCCAGG +
Preference number: 2 (lower is better)
Translates to: RFKLAELAEFQLFHLLAVCSAAS*QAGAPR
Trigger: CCTGGGGGCCCCGGCCTGCCAACTGGCAGCGCTGCA...TACTGCGAGAAGGTGAAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
3UTR-3UTR GCA 90 bp ATGAAGAGGTTGCTACAACCTGACAGCCTGACAGATACTCTCTGGCACAGTGACTCCCACGCAGCGCAGTaGTCTGTTGTGGGCAGCAGG +
Preference number: 2 (lower is better)
Translates to: MKRLLQPDSLTDTLWHSDSHAAQ*SVVGSR
Trigger: CCTGCTGCCCACAACAGAGCACTGCGCTGCGTGGGA...GTCACTGTGCCAGAGAGTATCTGTCAGGCTGTCAGGTTGTAGCAACCTCTTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR-3UTR CCA 90 bp CGAGCATTCTGCTTCCCACCCAAACCTAGGTTCTGCCAGCTCACTGAGACCCACCATTCATGCTCAAAATaGCCCTGGCCCACAGCAGCA +
Preference number: 2 (lower is better)
Translates to: RAFCFPPKPRFCQLTETHHSCSK*PWPTAA
Trigger: TGCTGCTGTGGGCCAGGGCCATTTTGAGCATGAATG...GTGGGTCTCAGTGAGCTGGCAGAACCTAGGTTTGGGTGGGAAGCAGAATGCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
3UTR-3UTR CCA 90 bp GTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTTCACGCCCTTCTCGCAGTACCTaGTGGTGTCTCTGCACTCCA +
Preference number: 2 (lower is better)
Translates to: VSPSCGQGRVFPHTLSSRPSRST*WCLCTP
Trigger: TGGAGTGCAGAGACACCACCAGGTACTGCGAGAAGG...GCGTGAAGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
3UTR CAA 90 bp TTCATGAGGGGAGGCTTATCTGTGGGTAAGGGACTCTGGCCACCCTaGCTCCTAAACTCAGGCCACGCGAGGGAAGGAGGCAAAAATTAC +
Preference number: 2 (lower is better)
Translates to: FMRGGLSVGKGLWPP*LLNSGHAREGGKNY
Trigger: GTAATTTTTGCCTCCTTCCCTCGCGTGGCCTGAGTTTAGGAGCAAGGGTGGCCAGAGTCCCTTACCCACAGATAAGCCTCCCCTCATGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR-3UTR GCA 90 bp GTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTTCACGCTTTGACGCGGACGTCCTTATaGTTGAAGGTGGAGGTGGAG +
Preference number: 2 (lower is better)
Translates to: VLRVARVEFFPTPYLHALTRTSL*LKVEVE
Trigger: CTCCACCTCCACCTTCAAGCATAAGGACGTCCGCGT...CAAAGCGTGAAGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542621.5
3UTR-3UTR GCA 90 bp AGTTCCACAGCAGCGAGATTTAAACTGGCTGAGTTGGCAGAGTTTCAGCTGTTTGTGATGTTGCAGCGCTaGCAGTTGGCAGGCCGGGGC +
Preference number: 2 (lower is better)
Translates to: SSTAARFKLAELAEFQLFVMLQR*QLAGRG
Trigger: GCCCCGGCCTGCCAACTGGCAGCGCTGCAACATCAC...AAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAATCTCGCTGCTGTGGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
3UTR-3UTR CCA 90 bp TGGGCCAGCTCTGGAATGAAGAGGTTGCTACAACCTGACAGCCTGACAGATACTGGTGGCCTTACTGCATaGCGAGACCCACCTCTCACT +
Preference number: 2 (lower is better)
Translates to: WASSGMKRLLQPDSLTDTGGLTA*RDPPLT
Trigger: AGTGAGAGGTGGGTCTCGCCATGCAGTAAGGCCACC...AGTATCTGTCAGGCTGTCAGGTTGTAGCAACCTCTTCATTCCAGAGCTGGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR-3UTR TCA 90 bp TTGTGTTTTAGAGGAGAAAGTGCCTCCTTCCACATTAGCCAGCAGCCTTCATTGTCCGAGGTGGTTGCGTaGGTCCTTCGTGTGGCCAGG +
Preference number: 2 (lower is better)
Translates to: LCFRGESASFHISQQPSLSEVVA*VLRVAR
Trigger: CCTGGCCACACGAAGGACTCACGCAACCACCTCGGA...CAATGAAGGCTGCTGGCTAATGTGGAAGGAGGCACTTTCTCCTCTAAAACACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
3UTR-3UTR CCA 90 bp TGGGCCAGCTCTGGAATGAAGAGGTTGCTACAACCTGACAGCCTGACAGATACTAGGTTCTGTCCGAGGTaGTTGCGTGAGTCCTTCGTG +
Preference number: 2 (lower is better)
Translates to: WASSGMKRLLQPDSLTDTRFCPR*LRESFV
Trigger: CACGAAGGACTCACGCAACCACCTCGGACAGAACCT...AGTATCTGTCAGGCTGTCAGGTTGTAGCAACCTCTTCATTCCAGAGCTGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR-3UTR CCA 90 bp ACTGAAAGAGAAAACACGCGGACGTCCTTATGCTTGAAGGTGGAGGTGGAGGAGCCTTCTCGCAGTACCTaGTGGTGTCTCTGCACTCCA +
Preference number: 2 (lower is better)
Translates to: TERENTRTSLCLKVEVEEPSRST*WCLCTP
Trigger: TGGAGTGCAGAGACACCACCAGGTACTGCGAGAAGG...CTCCTCCACCTCCACCTTCAAGCATAAGGACGTCCGCGTGTTTTCTCTTTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542621.5
3UTR CAA 90 bp CGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTTCACGCTTaGCCACAAGTTCCACAGCAGCGAGATTTAAACTGGCTGAGTTGG +
Preference number: 2 (lower is better)
Translates to: RVARVEFFPTPYLHA*PQVPQQRDLNWLSW
Trigger: CCAACTCAGCCAGTTTAAATCTCGCTGCTGTGGAACTTGTGGCAAAGCGTGAAGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
3UTR-3UTR GCA 90 bp TGGGCCAGCTCTGGAATGAAGAGGTTGCTACAACCTGACAGCCTGACAGATACTACTGTCTGCCTGGCCTaGTCTGCAACCTCCTTTAGA +
Preference number: 2 (lower is better)
Translates to: WASSGMKRLLQPDSLTDTTVCLA*SATSFR
Trigger: TCTAAAGGAGGTTGCAGAGCAGGCCAGGCAGACAGT...AGTATCTGTCAGGCTGTCAGGTTGTAGCAACCTCTTCATTCCAGAGCTGGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR-3UTR GCA 90 bp GTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTTCACGCACCTGGTGGTGTCTCTaGACTCCATGTTTTCACATG +
Preference number: 2 (lower is better)
Translates to: VSPSCGQGRVFPHTLSSRTWWCL*TPCFHM
Trigger: CATGTGAAAACATGGAGTGCAGAGACACCACCAGGT...GCGTGAAGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
3UTR-3UTR GCA 90 bp TTCATTCAGCCTCAATTACCCTTGAAAGGCAGTTGCTTCCCCGTGCTATTTGAGAGAAGAGTGTGGAGCTaGTCAGGGTACCCGGTGGGG +
Preference number: 2 (lower is better)
Translates to: FIQPQLPLKGSCFPVLFERRVWS*SGYPVG
Trigger: CCCCACCGGGTACCCTGAGCAGCTCCACACTCTTCT...CTCAAATAGCACGGGGAAGCAACTGCCTTTCAAGGGTAATTGAGGCTGAATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
3UTR-3UTR CCA 90 bp TTCATTCAGCCTCAATTACCCTTGAAAGGCAGTTGCTTCCCCGTGCTATTTGAGGCTCAGGGTACCCGGTaGGGCCATGATGATGAGAGG +
Preference number: 2 (lower is better)
Translates to: FIQPQLPLKGSCFPVLFEAQGTR*GHDDER
Trigger: CCTCTCATCATCATGGCCCCACCGGGTACCCTGAGC...CTCAAATAGCACGGGGAAGCAACTGCCTTTCAAGGGTAATTGAGGCTGAATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
3UTR-3UTR CCA 90 bp GTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTTCACGCTTTGATGCCATCCCGTGTCTaGCAGAAGACTTGTCTGTGT +
Preference number: 2 (lower is better)
Translates to: VLRVARVEFFPTPYLHALMPSRV*QKTCLC
Trigger: ACACAGACAAGTCTTCTGCCAGACACGGGATGGCAT...CAAAGCGTGAAGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542621.5
3UTR-3UTR CCA 90 bp TGGGGAAGAGGAGACAAAGGAGCAAAACACTCCTGTGTTTGTGATAGTGCGCTTCAGGCACTGCCTTGTTaGTGCGGGCATGCACACACT +
Preference number: 2 (lower is better)
Translates to: WGRGDKGAKHSCVCDSALQALPC*CGHAHT
Trigger: AGTGTGTGCATGCCCGCACCAACAAGGCAGTGCCTG...AAGCGCACTATCACAAACACAGGAGTGTTTTGCTCCTTTGTCTCCTCTTCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542621.5
3UTR CAA 90 bp CGCTTTGCCACAAGTTCCACAGCAGCGAGATTTAAACTGGCTGAGTaGGCAGAGTTTCAGCTGTTTCACCTTCTCGCAGTACCTGGTGGT +
Preference number: 2 (lower is better)
Translates to: RFATSSTAARFKLAE*AEFQLFHLLAVPGG
Trigger: ACCACCAGGTACTGCGAGAAGGTGAAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAATCTCGCTGCTGTGGAACTTGTGGCAAAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
3UTR-3UTR TCA 90 bp TGTCCACAGCTCACTAGGTGGGGACACAGATTAATATTGTCTTCCTCTCAAATTTGGGCAGCAGGGCTCTaGGCATGCGCACATGCATGG +
Preference number: 2 (lower is better)
Translates to: CPQLTRWGHRLILSSSQIWAAGL*ACAHAW
Trigger: CCATGCATGTGCGCATGCTCAGAGCCCTGCTGCCCA...AATTTGAGAGGAAGACAATATTAATCTGTGTCCCCACCTAGTGAGCTGTGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR-3UTR TCA 90 bp TTGTGTTTTAGAGGAGAAAGTGCCTCCTTCCACATTAGCCAGCAGCCTTCATTGGTTCTGCCAGCTCACTaGGACCCACTGCCAACTGCT +
Preference number: 2 (lower is better)
Translates to: LCFRGESASFHISQQPSLVLPAH*DPLPTA
Trigger: AGCAGTTGGCAGTGGGTCTCAGTGAGCTGGCAGAAC...CAATGAAGGCTGCTGGCTAATGTGGAAGGAGGCACTTTCTCCTCTAAAACACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
3UTR-3UTR TCA 90 bp CCCTATCTTCACGCTTTGCCACAAGTTCCACAGCAGCGAGATTTAAACTGGCTGTGTTTTCACATGGGGTaGTGTTGCAGCGCTGCCAGT +
Preference number: 2 (lower is better)
Translates to: PYLHALPQVPQQRDLNWLCFHMG*CCSAAS
Trigger: ACTGGCAGCGCTGCAACATCACCCCATGTGAAAACA...CAGCCAGTTTAAATCTCGCTGCTGTGGAACTTGTGGCAAAGCGTGAAGATAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
3UTR-3UTR GCA 90 bp TGGGGAAGAGGAGACAAAGGAGCAAAACACTCCTGTGTTTGTGATAGTGCGCTTACGCGGACGTCCTTATaGTTGAAGGTGGAGGTGGAG +
Preference number: 2 (lower is better)
Translates to: WGRGDKGAKHSCVCDSALTRTSL*LKVEVE
Trigger: CTCCACCTCCACCTTCAAGCATAAGGACGTCCGCGT...AAGCGCACTATCACAAACACAGGAGTGTTTTGCTCCTTTGTCTCCTCTTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR-3UTR GCA 90 bp GGAGAGGGAGGGTGTACTGTGGACACGCATAAACCCATTGTCCCACCCCGGTCCAATTTGTCCAATGTTTaGACCAATAGGCTACAAACC +
Preference number: 2 (lower is better)
Translates to: GEGGCTVDTHKPIVPPRSNLSNV*TNRLQT
Trigger: GGTTTGTAGCCTATTGGTGCAAACATTGGACAAATT...GGACCGGGGTGGGACAATGGGTTTATGCGTGTCCACAGTACACCCTCCCTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR-3UTR GCA 90 bp CAGATGCCCAATGTAGATTGCACCTCTAATGGTTCCCCATGTCTGGTAGCATGTACAGCTCTGATCTGCTaGCATGAAGCCACAGGGCTC +
Preference number: 2 (lower is better)
Translates to: QMPNVDCTSNGSPCLVACTALIC*HEATGL
Trigger: GAGCCCTGTGGCTTCATGGCAGCAGATCAGAGCTGT...ACATGCTACCAGACATGGGGAACCATTAGAGGTGCAATCTACATTGGGCATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
3UTR-3UTR CCA 90 bp TGTCCACAGCTCACTAGGTGGGGACACAGATTAATATTGTCTTCCTCTCAAATTCTCACCCTGCCCCACTaGGGAACACCACAGGCTCCT +
Preference number: 2 (lower is better)
Translates to: CPQLTRWGHRLILSSSQILTLPH*GTPQAP
Trigger: AGGAGCCTGTGGTGTTCCCCAGTGGGGCAGGGTGAG...AATTTGAGAGGAAGACAATATTAATCTGTGTCCCCACCTAGTGAGCTGTGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR-3UTR CCA 90 bp CCACAGCAGCGAGATTTAAACTGGCTGAGTTGGCAGAGTTTCAGCTGTTTCACCTCTCGCAGTACCTGGTaGTGTCTCTGCACTCCATGT +
Preference number: 2 (lower is better)
Translates to: PQQRDLNWLSWQSFSCFTSRSTW*CLCTPC
Trigger: ACATGGAGTGCAGAGACACCACCAGGTACTGCGAGA...GGTGAAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAATCTCGCTGCTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
3UTR CAA 90 bp CTCGGCTTAATGAGGATTTTGCCGAAGAGTCCCAGAGTTTTCATTTaGCTGCATGACTTTGACTTTGCTCCAGCCGCCTCACCACAGCTG +
Preference number: 2 (lower is better)
Translates to: LGLMRILPKSPRVFI*LHDFDFAPAASPQL
Trigger: CAGCTGTGGTGAGGCGGCTGGAGCAAAGTCAAAGTCATGCAGCAAAATGAAAACTCTGGGACTCTTCGGCAAAATCCTCATTAAGCCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR-3UTR TCA 90 bp GCAAAAATTACTTGGCCAAAGCTGCTCGGCTTAATGAGGATTTTGCCGAAGAGTGGACGTCCTTATGCTTaGAGGTGGAGGTGGAGGAGG +
Preference number: 2 (lower is better)
Translates to: AKITWPKLLGLMRILPKSGRPYA*RWRWRR
Trigger: CCTCCTCCACCTCCACCTTCAAGCATAAGGACGTCC...ACTCTTCGGCAAAATCCTCATTAAGCCGAGCAGCTTTGGCCAAGTAATTTTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR-3UTR TCA 90 bp AGCCAGCAGCCTTCATTGTCTTGTGGTGCTGCTGAGTTGCAATTCACAGAACAACTCTTTCTAGGTCTTTaGGACCCAGGTTTGGGAGGG +
Preference number: 2 (lower is better)
Translates to: SQQPSLSCGAAELQFTEQLFLGL*DPGLGG
Trigger: CCCTCCCAAACCTGGGTCTCAAAGACCTAGAAAGAG...TTGTTCTGTGAATTGCAACTCAGCAGCACCACAAGACAATGAAGGCTGCTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
3UTR-3UTR TCA 90 bp CAGATGCCCAATGTAGATTGCACCTCTAATGGTTCCCCATGTCTGGTAGCATGTGTCTTTTGTCATTTCTaGGGCGGAGGGCACAATGGC +
Preference number: 2 (lower is better)
Translates to: QMPNVDCTSNGSPCLVACVFCHF*GGGHNG
Trigger: GCCATTGTGCCCTCCGCCTCAGAAATGACAAAAGAC...ACATGCTACCAGACATGGGGAACCATTAGAGGTGCAATCTACATTGGGCATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380566.8
3UTR-3UTR GCA 90 bp TGTCCACAGCTCACTAGGTGGGGACACAGATTAATATTGTCTTCCTCTCAAATTCCAGGGTGGCCTTACTaGATGGCGAGACCCACCTCT +
Preference number: 2 (lower is better)
Translates to: CPQLTRWGHRLILSSSQIPGWPY*MARPTS
Trigger: AGAGGTGGGTCTCGCCATGCAGTAAGGCCACCCTGG...AATTTGAGAGGAAGACAATATTAATCTGTGTCCCCACCTAGTGAGCTGTGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR-3UTR CCA 90 bp ACGAGTCCCAGCAGTTTTAAGCAAGTCCCAGGCACTGACTCCTCGGCACTGCCTTTCACTTTGCAGATGTaGAAACATAAAGGGCAGACA +
Preference number: 2 (lower is better)
Translates to: TSPSSFKQVPGTDSSALPFTLQM*KHKGQT
Trigger: TGTCTGCCCTTTATGTTTCCACATCTGCAAAGTGAA...AGGCAGTGCCGAGGAGTCAGTGCCTGGGACTTGCTTAAAACTGCTGGGACTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
3UTR-3UTR CCA 90 bp AGCCAGCAGCCTTCATTGTCTTGTGGTGCTGCTGAGTTGCAATTCACAGAACAATGCTCCAACCCAACATaGAGCTGGAGGATGCTTGCT +
Preference number: 2 (lower is better)
Translates to: SQQPSLSCGAAELQFTEQCSNPT*SWRMLA
Trigger: AGCAAGCATCCTCCAGCTCCATGTTGGGTTGGAGCA...TTGTTCTGTGAATTGCAACTCAGCAGCACCACAAGACAATGAAGGCTGCTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
3UTR-3UTR CCA 90 bp GCAAAAATTACTTGGCCAAAGCTGCTCGGCTTAATGAGGATTTTGCCGAAGAGTTCTGACCAGCAGTTCTaGGTGCTCACAGGCCTCGGA +
Preference number: 2 (lower is better)
Translates to: AKITWPKLLGLMRILPKSSDQQF*VLTGLG
Trigger: TCCGAGGCCTGTGAGCACCCAGAACTGCTGGTCAGA...ACTCTTCGGCAAAATCCTCATTAAGCCGAGCAGCTTTGGCCAAGTAATTTTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542621.5
3UTR CAA 90 bp AAGTCCCAGGCACTGACTCCTCGGCACTGCCTCAGCATTTGGGTGTaGTTACAACACAGGAATGTGGTTAGAAAGACCCTTTTGCATGTT +
Preference number: 2 (lower is better)
Translates to: KSQALTPRHCLSIWV*LQHRNVVRKTLLHV
Trigger: AACATGCAAAAGGGTCTTTCTAACCACATTCCTGTGTTGTAACAACACCCAAATGCTGAGGCAGTGCCGAGGAGTCAGTGCCTGGGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
3UTR-3UTR GCA 90 bp ACCCTATCTTCACGCTTTGCCACAAGTTCCACAGCAGCGAGATTTAAACTGGCTGGAAGAGCACTGCACTaGTCTGATGGTAAGGTGATG +
Preference number: 2 (lower is better)
Translates to: TLSSRFATSSTAARFKLAGRALH*SDGKVM
Trigger: CATCACCTTACCATCAGAGCAGTGCAGTGCTCTTCC...AGCCAGTTTAAATCTCGCTGCTGTGGAACTTGTGGCAAAGCGTGAAGATAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542621.5
3UTR-3UTR CCA 90 bp CTTGTCCCACCTAAGCTAATTCACATGCCAGAGCATGAAGCCTTCTACATTTTCGGAGGTGTTGTTCCCTaGCTGTTTAGTGGGGCCAGA +
Preference number: 2 (lower is better)
Translates to: LVPPKLIHMPEHEAFYIFGGVVP*LFSGAR
Trigger: TCTGGCCCCACTAAACAGCCAGGGAACAACACCTCC...GAAAATGTAGAAGGCTTCATGCTCTGGCATGTGAATTAGCTTAGGTGGGACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380570.8
3UTR-3UTR CCA 90 bp CACACCCTATCTTCACGCTTTGCCACAAGTTCCACAGCAGCGAGATTTAAACTGCTCCATGTTTTCACATaGGGTGATGTTGCAGCGCTG +
Preference number: 2 (lower is better)
Translates to: HTLSSRFATSSTAARFKLLHVFT*GDVAAL
Trigger: CAGCGCTGCAACATCACCCCATGTGAAAACATGGAG...CAGTTTAAATCTCGCTGCTGTGGAACTTGTGGCAAAGCGTGAAGATAGGGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
3UTR-3UTR TCA 90 bp CTATTCGTTTTGGTGCTCAAAGAAGGGTTTAGGGACCACGAGTCCCAGCAGTTTGAATCATGGGACATGTaGGCAAGTCATGGGATCTCA +
Preference number: 2 (lower is better)
Translates to: LFVLVLKEGFRDHESQQFESWDM*ASHGIS
Trigger: TGAGATCCCATGACTTGCTCACATGTCCCATGATTC...AAACTGCTGGGACTCGTGGTCCCTAAACCCTTCTTTGAGCACCAAAACGAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
3UTR-3UTR TCA 90 bp TTGTGTTTTAGAGGAGAAAGTGCCTCCTTCCACATTAGCCAGCAGCCTTCATTGTACAACCTGACAGCCTaGCAGATACTCTCTGGCACA +
Preference number: 2 (lower is better)
Translates to: LCFRGESASFHISQQPSLYNLTA*QILSGT
Trigger: TGTGCCAGAGAGTATCTGTCAGGCTGTCAGGTTGTA...CAATGAAGGCTGCTGGCTAATGTGGAAGGAGGCACTTTCTCCTCTAAAACACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
3UTR-3UTR TCA 90 bp GGGAAGGAGGCAAAAATTACTTGGCCAAAGCTGCTCGGCTTAATGAGGATTTTGTACAACCTGACAGCCTaGCAGATACTCTCTGGCACA +
Preference number: 2 (lower is better)
Translates to: GKEAKITWPKLLGLMRILYNLTA*QILSGT
Trigger: TGTGCCAGAGAGTATCTGTCAGGCTGTCAGGTTGTA...CAAAATCCTCATTAAGCCGAGCAGCTTTGGCCAAGTAATTTTTGCCTCCTTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR-3UTR TCA 90 bp ACAAACATTAAATGTACATTCATTTCATGCAACGAGCATTCTGCTTCCCACCCATGTGGCTGCAGTGTGTaGGCTGCTTTGCCAGGGTGC +
Preference number: 2 (lower is better)
Translates to: TNIKCTFISCNEHSASHPCGCSV*AALPGC
Trigger: GCACCCTGGCAAAGCAGCTCACACACTGCAGCCACA...TGGGTGGGAAGCAGAATGCTCGTTGCATGAAATGAATGTACATTTAATGTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
3UTR-3UTR TCA 90 bp GCAAAAATTACTTGGCCAAAGCTGCTCGGCTTAATGAGGATTTTGCCGAAGAGTACCTCTCCCTACTGGTaGTCTGAGTTCTTCTCTCTC +
Preference number: 2 (lower is better)
Translates to: AKITWPKLLGLMRILPKSTSPYW*SEFFSL
Trigger: GAGAGAGAAGAACTCAGATCACCAGTAGGGAGAGGT...ACTCTTCGGCAAAATCCTCATTAAGCCGAGCAGCTTTGGCCAAGTAATTTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR-3UTR CCA 90 bp GAGAAAGGAGCGGGCCAGGCTATGTTACAGTTCAGGAAGGGTATAAAAGGACATTCATCGAATCTCTCCTaGTTTCAGCTGCTCCTTATG +
Preference number: 2 (lower is better)
Translates to: EKGAGQAMLQFRKGIKGHSSNLS*FQLLLM
Trigger: CATAAGGAGCAGCTGAAACCAGGAGAGATTCGATGA...ATGTCCTTTTATACCCTTCCTGAACTGTAACATAGCCTGGCCCGCTCCTTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380538.4
3UTR-3UTR CCA 90 bp TTGTGTTTTAGAGGAGAAAGTGCCTCCTTCCACATTAGCCAGCAGCCTTCATTGGAGGCAAAAATTACTTaGCCAAAGCTGCTCGGCTTA +
Preference number: 2 (lower is better)
Translates to: LCFRGESASFHISQQPSLEAKIT*PKLLGL
Trigger: TAAGCCGAGCAGCTTTGGCCAAGTAATTTTTGCCTC...CAATGAAGGCTGCTGGCTAATGTGGAAGGAGGCACTTTCTCCTCTAAAACACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380548.9
3UTR-3UTR CCA 90 bp TTTGTCATTTCTGAGGCGGAGGGCACAATGGCTTATTTCATCTTTCTGTTTCCTTGGTCATGCTGGATTTaGGGCATTCCTACTCCAGGA +
Preference number: 2 (lower is better)
Translates to: FVISEAEGTMAYFIFLFPWSCWI*GIPTPG
Trigger: TCCTGGAGTAGGAATGCCCCAAATCCAGCATGACCA...AGGAAACAGAAAGATGAAATAAGCCATTGTGCCCTCCGCCTCAGAAATGACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380566.8
3UTR CAA 90 bp TTTAGAGGAGAAAGTGCCTCCTTCCACATTAGCCAGCAGCCTTCATaGTCTTGTGGTGCTGCTGAGTTGCAATTCACAGAACAAACATTA +
Preference number: 2 (lower is better)
Translates to: FRGESASFHISQQPS*SCGAAELQFTEQTL
Trigger: TAATGTTTGTTCTGTGAATTGCAACTCAGCAGCACCACAAGACAATGAAGGCTGCTGGCTAATGTGGAAGGAGGCACTTTCTCCTCTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
3UTR CAA 90 bp GCAGCTTTTACAGATTCGGGATCATTCATTCAGCCTCAATTACCCTaGAAAGGCAGTTGCTTCCCCGTGCTATTTGAGGGAACATTATCT +
Preference number: 2 (lower is better)
Translates to: AAFTDSGSFIQPQLP*KGSCFPVLFEGTLS
Trigger: AGATAATGTTCCCTCAAATAGCACGGGGAAGCAACTGCCTTTCAAGGGTAATTGAGGCTGAATGAATGATCCCGAATCTGTAAAAGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380566.8
3UTR-3UTR GCA 90 bp GCTCTATCATCAAAGCAGCTTTTACAGATTCGGGATCATTCATTCAGCCTCAATCCCTTGAAAGGCAGTTaGTTCCCCGTGCTATTTGAG +
Preference number: 2 (lower is better)
Translates to: ALSSKQLLQIRDHSFSLNPLKGS*FPVLFE
Trigger: CTCAAATAGCACGGGGAAGCAACTGCCTTTCAAGGG...ATTGAGGCTGAATGAATGATCCCGAATCTGTAAAAGCTGCTTTGATGATAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380566.8
3UTR-3UTR CCA 90 bp CTATTCGTTTTGGTGCTCAAAGAAGGGTTTAGGGACCACGAGTCCCAGCAGTTTTACAACACAGGAATGTaGTTAGAAAGACCCTTTTGC +
Preference number: 2 (lower is better)
Translates to: LFVLVLKEGFRDHESQQFYNTGM*LERPFC
Trigger: GCAAAAGGGTCTTTCTAACCACATTCCTGTGTTGTA...AAACTGCTGGGACTCGTGGTCCCTAAACCCTTCTTTGAGCACCAAAACGAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276935.6
3UTR-3UTR CCA 90 bp CTTGTCCCACCTAAGCTAATTCACATGCCAGAGCATGAAGCCTTCTACATTTTCGGTTCATTATCGTTTTaGTGGAGGTGTTGTTCCCTG +
Preference number: 2 (lower is better)
Translates to: LVPPKLIHMPEHEAFYIFGSLSF*WRCCSL
Trigger: CAGGGAACAACACCTCCACCAAAACGATAATGAACC...GAAAATGTAGAAGGCTTCATGCTCTGGCATGTGAATTAGCTTAGGTGGGACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380570.8
3UTR-3UTR TCA 90 bp CATCAGAGTGAGATATTCCACAGGAAAGGCACCTCTATACAATTATCATTTTTATTGGTGACAGCAGGATaGGAAGCCAGGCCTCTTGGT +
Preference number: 2 (lower is better)
Translates to: HQSEIFHRKGTSIQLSFLLVTAG*EARPLG
Trigger: ACCAAGAGGCCTGGCTTCTCATCCTGCTGTCACCAA...TAAAAATGATAATTGTATAGAGGTGCCTTTCCTGTGGAATATCTCACTCTGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276935.6
3UTR-3UTR TCA 90 bp AGATTAGGCCATTATACTTTGGTCCCCTTTATTGTTGCAATTAGCAACCTTCTACACAGAGCTAGTTGGTaGCAGCAGGATGAGAAGCCA +
Preference number: 2 (lower is better)
Translates to: RLGHYTLVPFIVAISNLLHRASW*QQDEKP
Trigger: TGGCTTCTCATCCTGCTGTCACCAACTAGCTCTGTG...TAGAAGGTTGCTAATTGCAACAATAAAGGGGACCAAAGTATAATGGCCTAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
3UTR-3UTR GCA 90 bp TGGGGAAGAGGAGACAAAGGAGCAAAACACTCCTGTGTTTGTGATAGTGCGCTTAATTTGTCCAATGTTTaGACCAATAGGCTACAAACC +
Preference number: 2 (lower is better)
Translates to: WGRGDKGAKHSCVCDSALNLSNV*TNRLQT
Trigger: GGTTTGTAGCCTATTGGTGCAAACATTGGACAAATT...AAGCGCACTATCACAAACACAGGAGTGTTTTGCTCCTTTGTCTCCTCTTCCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR-3UTR GCA 90 bp AAACACTCCTGTGTTTGTGATAGTGCGCTTCTAGGAAAGACACAGGAATTTGTCGAGTTCTTCTCTCTCTaGACTCACCCACTAGAAGAA +
Preference number: 2 (lower is better)
Translates to: KHSCVCDSALLGKTQEFVEFFSL*THPLEE
Trigger: TTCTTCTAGTGGGTGAGTGCAGAGAGAGAAGAACTC...GACAAATTCCTGTGTCTTTCCTAGAAGCGCACTATCACAAACACAGGAGTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR-3UTR CCA 90 bp CAGAGTGAGATATTCCACAGGAAAGGCACCTCTATACAATTATCATTTTTAGGGGGCTTGACAGCTGGCTaGTGGGAAATCAGAGAATTG +
Preference number: 2 (lower is better)
Translates to: QSEIFHRKGTSIQLSFLGGLTAG*WEIREL
Trigger: CAATTCTCTGATTTCCCACCAGCCAGCTGTCAAGCC...CCCTAAAAATGATAATTGTATAGAGGTGCCTTTCCTGTGGAATATCTCACTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000276935.6
3UTR-3UTR GCA 90 bp AAACACTCCTGTGTTTGTGATAGTGCGCTTCTAGGAAAGACACAGGAATTTGTCTTCTGCAATGTTGTGTaGCTTAGAGCCTGCTTTGTT +
Preference number: 2 (lower is better)
Translates to: KHSCVCDSALLGKTQEFVFCNVV*LRACFV
Trigger: AACAAAGCAGGCTCTAAGGCACACAACATTGCAGAA...GACAAATTCCTGTGTCTTTCCTAGAAGCGCACTATCACAAACACAGGAGTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR-3UTR CCA 90 bp AAACACTCCTGTGTTTGTGATAGTGCGCTTCTAGGAAAGACACAGGAATTTGTCTTAAACTGGCTGAGTTaGCAGAGTTTCAGCTGTTTC +
Preference number: 2 (lower is better)
Translates to: KHSCVCDSALLGKTQEFVLNWLS*QSFSCF
Trigger: GAAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAA...GACAAATTCCTGTGTCTTTCCTAGAAGCGCACTATCACAAACACAGGAGTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542621.5
3UTR-3UTR CCA 90 bp CATCAGAGTGAGATATTCCACAGGAAAGGCACCTCTATACAATTATCATTTTTATGTTGGCTTGACAGCTaGCTGGTGGGAAATCAGAGA +
Preference number: 2 (lower is better)
Translates to: HQSEIFHRKGTSIQLSFLCWLDS*LVGNQR
Trigger: TCTCTGATTTCCCACCAGCCAGCTGTCAAGCCAACA...TAAAAATGATAATTGTATAGAGGTGCCTTTCCTGTGGAATATCTCACTCTGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276935.6
3UTR-3UTR GCA 90 bp AGATTAGGCCATTATACTTTGGTCCCCTTTATTGTTGCAATTAGCAACCTTCTATCCTATTCGTTTTGGTaGTCAAAGAAGGGTTTAGGG +
Preference number: 2 (lower is better)
Translates to: RLGHYTLVPFIVAISNLLSYSFW*SKKGLG
Trigger: CCCTAAACCCTTCTTTGAGCACCAAAACGAATAGGA...TAGAAGGTTGCTAATTGCAACAATAAAGGGGACCAAAGTATAATGGCCTAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276935.6
3UTR-3UTR CCA 90 bp CATCAGAGTGAGATATTCCACAGGAAAGGCACCTCTATACAATTATCATTTTTACATGTGAGCAAGTCATaGGATCTCAGATCATCAGGT +
Preference number: 2 (lower is better)
Translates to: HQSEIFHRKGTSIQLSFLHVSKS*DLRSSG
Trigger: ACCTGATGATCTGAGATCCCATGACTTGCTCACATG...TAAAAATGATAATTGTATAGAGGTGCCTTTCCTGTGGAATATCTCACTCTGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276935.6
3UTR-3UTR GCA 90 bp TGTTGTTACAACACAGGAATGTGGTTAGAAAGACCCTTTTGCATGTTTTTCAAAACAACCAGTTCACTTTaGAGATGTGGAAACATAAAG +
Preference number: 2 (lower is better)
Translates to: CCYNTGMWLERPFCMFFKTTSSL*RCGNIK
Trigger: CTTTATGTTTCCACATCTGCAAAGTGAACTGGTTGT...TTTGAAAAACATGCAAAAGGGTCTTTCTAACCACATTCCTGTGTTGTAACAACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000276935.6
3UTR GCA 72 bp AGGCCGGGGCCCCCAGGAGCACAGGTGCTCAGGCACTaGCTTGTTGGTGCGGGCATGCACACACTCCACACG +
Preference number: 3 (lower is better)
Translates to: RPGPPGAQVLRH*LVGAGMHTLHT
Trigger: CGTGTGGAGTGTGTGCATGCCCGCACCAACAAGGCAGTGCCTGAGCACCTGTGCTCCTGGGGGCCCCGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542621.5
3UTR GCA 72 bp TGCCAGTTGGCAGGCCGGGGCCCCCAGGAGCACAGGTaGTCAGGCACTGCCTTGTTGGTGCGGGCATGCACA +
Preference number: 3 (lower is better)
Translates to: CQLAGRGPQEHR*SGTALLVRACT
Trigger: TGTGCATGCCCGCACCAACAAGGCAGTGCCTGAGCACCTGTGCTCCTGGGGGCCCCGGCCTGCCAACTGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542621.5
3UTR CCA 72 bp GCCCCCAGGAGCACAGGTGCTCAGGCACTGCCTTGTTaGTGCGGGCATGCACACACTCCACACGCCGGGACT +
Preference number: 3 (lower is better)
Translates to: APRSTGAQALPC*CGHAHTPHAGT
Trigger: AGTCCCGGCGTGTGGAGTGTGTGCATGCCCGCACCAACAAGGCAGTGCCTGAGCACCTGTGCTCCTGGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542621.5
3UTR GCA 72 bp CCCAGGAGCACAGGTGCTCAGGCACTGCCTTGTTGGTaGGGGCATGCACACACTCCACACGCCGGGACTGGA +
Preference number: 3 (lower is better)
Translates to: PRSTGAQALPCW*GHAHTPHAGTG
Trigger: TCCAGTCCCGGCGTGTGGAGTGTGTGCATGCCCGCACCAACAAGGCAGTGCCTGAGCACCTGTGCTCCTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542621.5
3UTR GCA 72 bp GATAGCTTGGGAAGTGGGGACTCCCACGCAGCGCAGTaGTCTGTTGTGGGCAGCAGGGCTCTGAGCATGCGC +
Preference number: 3 (lower is better)
Translates to: DSLGSGDSHAAQ*SVVGSRALSMR
Trigger: GCGCATGCTCAGAGCCCTGCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTCCCCACTTCCCAAGCTATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR-3UTR CAA 90 bp CCAGGGTGGCCTTACTGCATGGCGAGACCCACCTCTCACTGGCTTTGCTGCAGCTTCTGTCCGAGGTGGTaGCGTGAGTCCTTCGTGTGG +
Preference number: 3 (lower is better)
Translates to: PGWPYCMARPTSHWLCCSFCPRW*RESFVW
Trigger: CCACACGAAGGACTCACGCAACCACCTCGGACAGAA...GCTGCAGCAAAGCCAGTGAGAGGTGGGTCTCGCCATGCAGTAAGGCCACCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR-3UTR CAA 90 bp GGAGAGGGAGGGTGTACTGTGGACACGCATAAACCCATTGTCCCACCCCGGTCCACACGCATAAACCCATaGTCCCACCCCGGTCCCTGG +
Preference number: 3 (lower is better)
Translates to: GEGGCTVDTHKPIVPPRSTRINP*SHPGPW
Trigger: CCAGGGACCGGGGTGGGACAATGGGTTTATGCGTGT...GGACCGGGGTGGGACAATGGGTTTATGCGTGTCCACAGTACACCCTCCCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR TCA 72 bp GAGCATGCGCACATGCATGGGATCAGAGCTGGTCCATaGGCCTCATGCAGCCTGGAAGCCCCTGCTCACCCT +
Preference number: 3 (lower is better)
Translates to: EHAHMHGIRAGP*ASCSLEAPAHP
Trigger: AGGGTGAGCAGGGGCTTCCAGGCTGCATGAGGCTCATGGACCAGCTCTGATCCCATGCATGTGCGCATGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR CCA 72 bp TGCAGCTGCACAGGCAGGACGTTGACTCTGATAGCTTaGGAAGTGGGGACTCCCACGCAGCGCAGTGCTCTG +
Preference number: 3 (lower is better)
Translates to: CSCTGRTLTLIA*EVGTPTQRSAL
Trigger: CAGAGCACTGCGCTGCGTGGGAGTCCCCACTTCCCAAGCTATCAGAGTCAACGTCCTGCCTGTGCAGCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR CCA 72 bp GGGTGGCCTTACTGCATGGCGAGACCCACCTCTCACTaGCTTTGCTGCAGCTGCACAGGCAGGACGTTGACT +
Preference number: 3 (lower is better)
Translates to: GWPYCMARPTSH*LCCSCTGRTLT
Trigger: AGTCAACGTCCTGCCTGTGCAGCTGCAGCAAAGCCAGTGAGAGGTGGGTCTCGCCATGCAGTAAGGCCACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR CCA 72 bp CTCCAGTGTACACTGCAGGCCTCTGACCAGCAGTTCTaGGTGCTCACAGGCCTCGGAAGAGCACTGCACTGC +
Preference number: 3 (lower is better)
Translates to: LQCTLQASDQQF*VLTGLGRALHC
Trigger: GCAGTGCAGTGCTCTTCCGAGGCCTGTGAGCACCCAGAACTGCTGGTCAGAGGCCTGCAGTGTACACTGGAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542621.5
3UTR GCA 72 bp GGAGGGAGGAAGCTCTTCAAGGGAGCCCCCACTGTCTaGCTGGCCTGCTCTGCAACCTCCTTTAGACATCTG +
Preference number: 3 (lower is better)
Translates to: GGRKLFKGAPTV*LACSATSFRHL
Trigger: CAGATGTCTAAAGGAGGTTGCAGAGCAGGCCAGGCAGACAGTGGGGGCTCCCTTGAAGAGCTTCCTCCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR-3UTR CAA 90 bp AGTGGGGACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCAGGGCTCTGAGCTCATTTTCTGCAATGTaGTGTGCCTTAGAGCCTGCT +
Preference number: 3 (lower is better)
Translates to: SGDSHAAQCSVVGSRALSSFSAM*CALEPA
Trigger: AGCAGGCTCTAAGGCACACAACATTGCAGAAAATGA...GCTCAGAGCCCTGCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTCCCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR CCA 72 bp GGAGGAAGCTCTTCAAGGGAGCCCCCACTGTCTGCCTaGCCTGCTCTGCAACCTCCTTTAGACATCTGTCCT +
Preference number: 3 (lower is better)
Translates to: GGSSSREPPLSA*PALQPPLDICP
Trigger: AGGACAGATGTCTAAAGGAGGTTGCAGAGCAGGCCAGGCAGACAGTGGGGGCTCCCTTGAAGAGCTTCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR CCA 72 bp TTCATGAGGGGAGGCTTATCTGTGGGTAAGGGACTCTaGCCACCCTTGCTCCTAAACTCAGGCCACGCGAGG +
Preference number: 3 (lower is better)
Translates to: FMRGGLSVGKGL*PPLLLNSGHAR
Trigger: CCTCGCGTGGCCTGAGTTTAGGAGCAAGGGTGGCCAGAGTCCCTTACCCACAGATAAGCCTCCCCTCATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR-3UTR CAA 90 bp TGCTGCCTCCACCACCCCGCCTTGCTAGATAAATACTACATGCCGGAGGACCTGGTTGACTCTGATAGCTaGGGAAGTGGGGACTCCCAC +
Preference number: 3 (lower is better)
Translates to: CCLHHPALLDKYYMPEDLVDSDS*GSGDSH
Trigger: GTGGGAGTCCCCACTTCCCAAGCTATCAGAGTCAAC...CAGGTCCTCCGGCATGTAGTATTTATCTAGCAAGGCGGGGTGGTGGAGGCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR GCA 72 bp ATGGCGAGACCCACCTCTCACTGGCTTTGCTGCAGCTaGACAGGCAGGACGTTGACTCTGATAGCTTGGGAA +
Preference number: 3 (lower is better)
Translates to: MARPTSHWLCCS*TGRTLTLIAWE
Trigger: TTCCCAAGCTATCAGAGTCAACGTCCTGCCTGTGCAGCTGCAGCAAAGCCAGTGAGAGGTGGGTCTCGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR GCA 72 bp CCCAAACCTAGGTTCTGCCAGCTCACTGAGACCCACTaGCAACTGCTCCAACCCAACATGGAGCTGGAGGAT +
Preference number: 3 (lower is better)
Translates to: PKPRFCQLTETH*QLLQPNMELED
Trigger: ATCCTCCAGCTCCATGTTGGGTTGGAGCAGTTGGCAGTGGGTCTCAGTGAGCTGGCAGAACCTAGGTTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
3UTR CCA 72 bp TGGACACGCATAAACCCATTGTCCCACCCCGGTCCCTaGGCCAGCTCTGGAATGAAGAGGTTGCTACAACCT +
Preference number: 3 (lower is better)
Translates to: WTRINPLSHPGP*ASSGMKRLLQP
Trigger: AGGTTGTAGCAACCTCTTCATTCCAGAGCTGGCCCAGGGACCGGGGTGGGACAATGGGTTTATGCGTGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR TCA 72 bp TGGAAATGCAGCCCTGATGTCAATGGTAGCCCGGGGTaGGTGGCATTTCATGAGGGGAGGCTTATCTGTGGG +
Preference number: 3 (lower is better)
Translates to: WKCSPDVNGSPG*VAFHEGRLICG
Trigger: CCCACAGATAAGCCTCCCCTCATGAAATGCCACTCACCCCGGGCTACCATTGACATCAGGGCTGCATTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR TCA 72 bp GCCTCGGAAGAGCACTGCACTGCTCTGATGGTAAGGTaGTGCCATCCCGTGTCTGGCAGAAGACTTGTCTGT +
Preference number: 3 (lower is better)
Translates to: ASEEHCTALMVR*CHPVSGRRLVC
Trigger: ACAGACAAGTCTTCTGCCAGACACGGGATGGCATCACCTTACCATCAGAGCAGTGCAGTGCTCTTCCGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542621.5
3UTR GCA 72 bp AAGCTCTTCAAGGGAGCCCCCACTGTCTGCCTGGCCTaGTCTGCAACCTCCTTTAGACATCTGTCCTTTCCT +
Preference number: 3 (lower is better)
Translates to: KLFKGAPTVCLA*SATSFRHLSFP
Trigger: AGGAAAGGACAGATGTCTAAAGGAGGTTGCAGAGCAGGCCAGGCAGACAGTGGGGGCTCCCTTGAAGAGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR GCA 72 bp TCGGATTTAGATAAAGAGGTGCCAGGGTGGCCTTACTaGATGGCGAGACCCACCTCTCACTGGCTTTGCTGC +
Preference number: 3 (lower is better)
Translates to: SDLDKEVPGWPY*MARPTSHWLCC
Trigger: GCAGCAAAGCCAGTGAGAGGTGGGTCTCGCCATGCAGTAAGGCCACCCTGGCACCTCTTTATCTAAATCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR CCA 72 bp CTCTGCACTCACCCACTAGAAGAACTGAGTGAGTTCTaGGCTAGTTTCTGCCTCAGCATGGTGTCCCCTCCC +
Preference number: 3 (lower is better)
Translates to: LCTHPLEELSEF*ASFCLSMVSPP
Trigger: GGGAGGGGACACCATGCTGAGGCAGAAACTAGCCCAGAACTCACTCAGTTCTTCTAGTGGGTGAGTGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR-3UTR CAA 90 bp GATAGCTTGGGAAGTGGGGACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCTTTAAACTGGCTGAGTaGGCAGAGTTTCAGCTGTTT +
Preference number: 3 (lower is better)
Translates to: DSLGSGDSHAAQCSVVGSFKLAE*AEFQLF
Trigger: AAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAA...GCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTCCCCACTTCCCAAGCTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542621.5
3UTR CCA 72 bp AACTCCTGGCTGTGCCCAGTGAGAGGTCTTGCCTGTTaGCTTGACAGCTGGCTGGTGGGAAATCAGAGAATT +
Preference number: 3 (lower is better)
Translates to: NSWLCPVRGLAC*LDSWLVGNQRI
Trigger: AATTCTCTGATTTCCCACCAGCCAGCTGTCAAGCCAACAGGCAAGACCTCTCACTGGGCACAGCCAGGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276935.6
3UTR CCA 72 bp AATGCAGCCCTGATGTCAATGGTAGCCCGGGGTGAGTaGCATTTCATGAGGGGAGGCTTATCTGTGGGTAAG +
Preference number: 3 (lower is better)
Translates to: NAALMSMVARGE*HFMRGGLSVGK
Trigger: CTTACCCACAGATAAGCCTCCCCTCATGAAATGCCACTCACCCCGGGCTACCATTGACATCAGGGCTGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR-3UTR CAA 90 bp TGGGCCATTCATGCTCAAAATGGCCCTGGCCCACAGCAGCAGTTAGTTAGTGCGTCTGGAATGAAGAGGTaGCTACAACCTGACAGCCTG +
Preference number: 3 (lower is better)
Translates to: WAIHAQNGPGPQQQLVSASGMKR*LQPDSL
Trigger: CAGGCTGTCAGGTTGTAGCAACCTCTTCATTCCAGA...CGCACTAACTAACTGCTGCTGTGGGCCAGGGCCATTTTGAGCATGAATGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR TCA 72 bp GGACAGGCTTCCTCTTTGGGACTGCAGCTGGTAACCTaGCTTGTCCCACCTAAGCTAATTCACATGCCAGAG +
Preference number: 3 (lower is better)
Translates to: GQASSLGLQLVT*LVPPKLIHMPE
Trigger: CTCTGGCATGTGAATTAGCTTAGGTGGGACAAGTCAGGTTACCAGCTGCAGTCCCAAAGAGGAAGCCTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380570.8
3UTR-3UTR CAA 90 bp GGAGAGGGAGGGTGTACTGTGGACACGCATAAACCCATTGTCCCACCCCGGTCCGAAAGACACAGGAATTaGTCCAATGTTTGCACCAAT +
Preference number: 3 (lower is better)
Translates to: GEGGCTVDTHKPIVPPRSERHRN*SNVCTN
Trigger: ATTGGTGCAAACATTGGACAAATTCCTGTGTCTTTC...GGACCGGGGTGGGACAATGGGTTTATGCGTGTCCACAGTACACCCTCCCTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR CCA 72 bp TCCCAGGCACTGACTCCTCGGCACTGCCTCAGCATTTaGGTGTTGTTACAACACAGGAATGTGGTTAGAAAG +
Preference number: 3 (lower is better)
Translates to: SQALTPRHCLSI*VLLQHRNVVRK
Trigger: CTTTCTAACCACATTCCTGTGTTGTAACAACACCCAAATGCTGAGGCAGTGCCGAGGAGTCAGTGCCTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276935.6
3UTR CCA 72 bp TGCCCAGTGAGAGGTCTTGCCTGTTGGCTTGACAGCTaGCTGGTGGGAAATCAGAGAATTGAGTTTATCTGG +
Preference number: 3 (lower is better)
Translates to: CPVRGLACWLDS*LVGNQRIEFIW
Trigger: CCAGATAAACTCAATTCTCTGATTTCCCACCAGCCAGCTGTCAAGCCAACAGGCAAGACCTCTCACTGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276935.6
3UTR-3UTR CAA 90 bp TGCCTCAGAAGGACAGGCTTCCTCTTTGGGACTGCAGCTGGTAACCTGACTTGTAGGTTCATTATCGTTTaGGTGGAGGTGTTGTTCCCT +
Preference number: 3 (lower is better)
Translates to: CLRRTGFLFGTAAGNLTCRFIIV*VEVLFP
Trigger: AGGGAACAACACCTCCACCAAAACGATAATGAACCT...ACAAGTCAGGTTACCAGCTGCAGTCCCAAAGAGGAAGCCTGTCCTTCTGAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380570.8
3UTR-3UTR CAA 90 bp CAGATGCCCAATGTAGATTGCACCTCTAATGGTTCCCCATGTCTGGTAGCATGTTTGGTCATGCTGGATTaGGGGCATTCCTACTCCAGG +
Preference number: 3 (lower is better)
Translates to: QMPNVDCTSNGSPCLVACLVMLD*GHSYSR
Trigger: CCTGGAGTAGGAATGCCCCAAATCCAGCATGACCAA...ACATGCTACCAGACATGGGGAACCATTAGAGGTGCAATCTACATTGGGCATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380566.8
3UTR-3UTR CAA 90 bp CAGATGCCCAATGTAGATTGCACCTCTAATGGTTCCCCATGTCTGGTAGCATGTCAGCCTCAATTACCCTaGAAAGGCAGTTGCTTCCCC +
Preference number: 3 (lower is better)
Translates to: QMPNVDCTSNGSPCLVACQPQLP*KGSCFP
Trigger: GGGGAAGCAACTGCCTTTCAAGGGTAATTGAGGCTG...ACATGCTACCAGACATGGGGAACCATTAGAGGTGCAATCTACATTGGGCATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
3UTR GCA 72 bp GTTTTAAGCAAGTCCCAGGCACTGACTCCTCGGCACTaGCTCAGCATTTGGGTGTTGTTACAACACAGGAAT +
Preference number: 3 (lower is better)
Translates to: VLSKSQALTPRH*LSIWVLLQHRN
Trigger: ATTCCTGTGTTGTAACAACACCCAAATGCTGAGGCAGTGCCGAGGAGTCAGTGCCTGGGACTTGCTTAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
3UTR-3UTR CAA 90 bp AAACACTCCTGTGTTTGTGATAGTGCGCTTCTAGGAAAGACACAGGAATTTGTCTTCTGTCCGAGGTGGTaGCGTGAGTCCTTCGTGTGG +
Preference number: 3 (lower is better)
Translates to: KHSCVCDSALLGKTQEFVFCPRW*RESFVW
Trigger: CCACACGAAGGACTCACGCAACCACCTCGGACAGAA...GACAAATTCCTGTGTCTTTCCTAGAAGCGCACTATCACAAACACAGGAGTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR-3UTR CAA 90 bp TTGTGTTTTAGAGGAGAAAGTGCCTCCTTCCACATTAGCCAGCAGCCTTCATTGCCTCTTTCTAGGTCTTaGAGACCCAGGTTTGGGAGG +
Preference number: 3 (lower is better)
Translates to: LCFRGESASFHISQQPSLPLSRS*RPRFGR
Trigger: CCTCCCAAACCTGGGTCTCAAAGACCTAGAAAGAGG...CAATGAAGGCTGCTGGCTAATGTGGAAGGAGGCACTTTCTCCTCTAAAACACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
3UTR-3UTR CAA 90 bp GGGAAGGAGGCAAAAATTACTTGGCCAAAGCTGCTCGGCTTAATGAGGATTTTGCCCTATCTTCACGCTTaGCCACAAGTTCCACAGCAG +
Preference number: 3 (lower is better)
Translates to: GKEAKITWPKLLGLMRILPYLHA*PQVPQQ
Trigger: CTGCTGTGGAACTTGTGGCAAAGCGTGAAGATAGGG...CAAAATCCTCATTAAGCCGAGCAGCTTTGGCCAAGTAATTTTTGCCTCCTTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542621.5
3UTR GCA 72 bp TGGGATCTCAGATCATCAGGTACAACCAGTTCACTTTaGAGATGTGGAAACATAAAGGGCAGACACCTCGCC +
Preference number: 3 (lower is better)
Translates to: WDLRSSGTTSSL*RCGNIKGRHLA
Trigger: GGCGAGGTGTCTGCCCTTTATGTTTCCACATCTGCAAAGTGAACTGGTTGTACCTGATGATCTGAGATCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276935.6
3UTR CCA 72 bp CAAGTTCCACAGCAGCGAGATTTAAACTGGCTGAGTTaGCAGAGTTTCAGCTGTTTCACCTTCTCGCAGTAC +
Preference number: 3 (lower is better)
Translates to: QVPQQRDLNWLS*QSFSCFTFSQY
Trigger: GTACTGCGAGAAGGTGAAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAATCTCGCTGCTGTGGAACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
3UTR CCA 72 bp GCTTTGCCACAAGTTCCACAGCAGCGAGATTTAAACTaGCTGAGTTGGCAGAGTTTCAGCTGTTTCACCTTC +
Preference number: 3 (lower is better)
Translates to: ALPQVPQQRDLN*LSWQSFSCFTF
Trigger: GAAGGTGAAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAATCTCGCTGCTGTGGAACTTGTGGCAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
3UTR-3UTR CAA 90 bp GGGAAGGAGGCAAAAATTACTTGGCCAAAGCTGCTCGGCTTAATGAGGATTTTGTTTTGCTGCATGACTTaGACTTTGCTCCAGCCGCCT +
Preference number: 3 (lower is better)
Translates to: GKEAKITWPKLLGLMRILFCCMT*TLLQPP
Trigger: AGGCGGCTGGAGCAAAGTCAAAGTCATGCAGCAAAA...CAAAATCCTCATTAAGCCGAGCAGCTTTGGCCAAGTAATTTTTGCCTCCTTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR-3UTR CAA 90 bp TGTCTTCCTCTCAAATTTTACTTCCAGGCTGGCTGGAAATGCAGCCCTGATGTCGGCTTAATGAGGATTTaGCCGAAGAGTCCCAGAGTT +
Preference number: 3 (lower is better)
Translates to: CLPLKFYFQAGWKCSPDVGLMRI*PKSPRV
Trigger: AACTCTGGGACTCTTCGGCAAAATCCTCATTAAGCC...GACATCAGGGCTGCATTTCCAGCCAGCCTGGAAGTAAAATTTGAGAGGAAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR-3UTR CAA 90 bp AGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTTCACGCTTTTTTAAACTGGCTGAGTaGGCAGAGTTTCAGCTGTTT +
Preference number: 3 (lower is better)
Translates to: SPSCGQGRVFPHTLSSRFFKLAE*AEFQLF
Trigger: AAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAA...AAAGCGTGAAGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
3UTR TCA 72 bp TCCTTTCCTTTCCCAACATCCTGTCCTCCAGCTAACTaGAAGAGAAAACACGCGGACGTCCTTATGCTTGAA +
Preference number: 3 (lower is better)
Translates to: SFPFPTSCPPAN*KRKHADVLMLE
Trigger: TTCAAGCATAAGGACGTCCGCGTGTTTTCTCTTTCAGTTAGCTGGAGGACAGGATGTTGGGAAAGGAAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR-3UTR CAA 90 bp ACAAACATTAAATGTACATTCATTTCATGCAACGAGCATTCTGCTTCCCACCCATGCATGACTTTGACTTaGCTCCAGCCGCCTCACCAC +
Preference number: 3 (lower is better)
Translates to: TNIKCTFISCNEHSASHPCMTLT*LQPPHH
Trigger: GTGGTGAGGCGGCTGGAGCAAAGTCAAAGTCATGCA...TGGGTGGGAAGCAGAATGCTCGTTGCATGAAATGAATGTACATTTAATGTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
3UTR TCA 72 bp TTGAACACCAGGAGAAGGGAAGGAGAGATTTTTCTCTaGCATCAGAGTGAGATATTCCACAGGAAAGGCACC +
Preference number: 3 (lower is better)
Translates to: LNTRRREGEIFL*HQSEIFHRKGT
Trigger: GGTGCCTTTCCTGTGGAATATCTCACTCTGATGTCAGAGAAAAATCTCTCCTTCCCTTCTCCTGGTGTTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276935.6
3UTR GCA 72 bp TGTCTAGATGTAGAAAATGTCACAGCTCTGATCTGCTaGCATGAAGCCACAGGGCTCAGTGAAGAGTCTTTT +
Preference number: 3 (lower is better)
Translates to: CLDVENVTALIC*HEATGLSEESF
Trigger: AAAAGACTCTTCACTGAGCCCTGTGGCTTCATGGCAGCAGATCAGAGCTGTGACATTTTCTACATCTAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
3UTR GCA 72 bp AAAAACAGATTGAATGACCAGATGCCCAATGTAGATTaGACCTCTAATGGTTCCCCATGTCTGGTAGCATGT +
Preference number: 3 (lower is better)
Translates to: KNRLNDQMPNVD*TSNGSPCLVAC
Trigger: ACATGCTACCAGACATGGGGAACCATTAGAGGTGCAATCTACATTGGGCATCTGGTCATTCAATCTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380566.8
3UTR TCA 72 bp GAGAAGGGAAGGAGAGATTTTTCTCTGACATCAGAGTaGGATATTCCACAGGAAAGGCACCTCTATACAATT +
Preference number: 3 (lower is better)
Translates to: EKGRRDFSLTSE*DIPQERHLYTI
Trigger: AATTGTATAGAGGTGCCTTTCCTGTGGAATATCTCACTCTGATGTCAGAGAAAAATCTCTCCTTCCCTTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276935.6
3UTR-3UTR CAA 90 bp GCTCTATCATCAAAGCAGCTTTTACAGATTCGGGATCATTCATTCAGCCTCAATAAACATCATTTACTTTaGGTCATGCTGGATTTGGGG +
Preference number: 3 (lower is better)
Translates to: ALSSKQLLQIRDHSFSLNKHHLL*VMLDLG
Trigger: CCCCAAATCCAGCATGACCAAAAGTAAATGATGTTT...ATTGAGGCTGAATGAATGATCCCGAATCTGTAAAAGCTGCTTTGATGATAGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
3UTR GCA 72 bp GTGGGAAATCAGAGAATTGAGTTTATCTGGAGCAAATaGGACAACATTAAGCTCAACAACTGTTCTTGTCTG +
Preference number: 3 (lower is better)
Translates to: VGNQRIEFIWSK*DNIKLNNCSCL
Trigger: CAGACAAGAACAGTTGTTGAGCTTAATGTTGTCGCATTTGCTCCAGATAAACTCAATTCTCTGATTTCCCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276935.6
3UTR-3UTR CAA 90 bp ACAAACATTAAATGTACATTCATTTCATGCAACGAGCATTCTGCTTCCCACCCAGAAAGACACAGGAATTaGTCCAATGTTTGCACCAAT +
Preference number: 3 (lower is better)
Translates to: TNIKCTFISCNEHSASHPERHRN*SNVCTN
Trigger: ATTGGTGCAAACATTGGACAAATTCCTGTGTCTTTC...TGGGTGGGAAGCAGAATGCTCGTTGCATGAAATGAATGTACATTTAATGTTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
3UTR CCA 72 bp AAGAGTCTTTTGTCATTTCTGAGGCGGAGGGCACAATaGCTTATTTCATCTTTCTGTTTCCTTTACGATTTT +
Preference number: 3 (lower is better)
Translates to: KSLLSFLRRRAQ*LISSFCFLYDF
Trigger: AAAATCGTAAAGGAAACAGAAAGATGAAATAAGCCATTGTGCCCTCCGCCTCAGAAATGACAAAAGACTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
3UTR-3UTR CAA 90 bp CATCAGAGTGAGATATTCCACAGGAAAGGCACCTCTATACAATTATCATTTTTAGCTCAACAACTGTTCTaGTCTGTGAGTCAACAAAAG +
Preference number: 3 (lower is better)
Translates to: HQSEIFHRKGTSIQLSFLAQQLF*SVSQQK
Trigger: CTTTTGTTGACTCACAGACAAGAACAGTTGTTGAGC...TAAAAATGATAATTGTATAGAGGTGCCTTTCCTGTGGAATATCTCACTCTGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276935.6
3UTR-3UTR CAA 90 bp CATCAGAGTGAGATATTCCACAGGAAAGGCACCTCTATACAATTATCATTTTTACTTTGGTCCCCTTTATaGTTGCAATTAGCAACCTTC +
Preference number: 3 (lower is better)
Translates to: HQSEIFHRKGTSIQLSFLLWSPL*LQLATF
Trigger: GAAGGTTGCTAATTGCAACAATAAAGGGGACCAAAG...TAAAAATGATAATTGTATAGAGGTGCCTTTCCTGTGGAATATCTCACTCTGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR GCA 90 bp AGTGGGGACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCAGGGCTCTGAGCCAGCCTGGAAGCCCCTaGTCACCCTGCCCCACTGGG +
Preference number: 4 (lower is better)
Translates to: SGDSHAAQCSVVGSRALSQPGSP*SPCPTG
Trigger: CCCAGTGGGGCAGGGTGAGCAGGGGCTTCCAGGCTG...GCTCAGAGCCCTGCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTCCCCACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CCA 90 bp GACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCAGGGCTCTGAGCATGCGCCACTCAGTGTCCCGCTaGCCAGGGCCACCGTCTGCC +
Preference number: 4 (lower is better)
Translates to: DSHAAQCSVVGSRALSMRHSVSR*PGPPSA
Trigger: GGCAGACGGTGGCCCTGGCCAGCGGGACACTGAGTG...GCGCATGCTCAGAGCCCTGCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp GGTGATGTTGCAGCGCTGCCAGTTGGCAGGCCGGGGCCCCCAGGAGCACAGGTGCCCCAGGAGCACAGGTaGTCAGGCACTGCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: GDVAALPVGRPGPPGAQVPQEHR*SGTALL
Trigger: CAACAAGGCAGTGCCTGAGCACCTGTGCTCCTGGGG...CACCTGTGCTCCTGGGGGCCCCGGCCTGCCAACTGGCAGCGCTGCAACATCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR GCA 90 bp AGTGGGGACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCAGGGCTCTGAGCGGAGCCCCCACTGTCTaGCTGGCCTGCTCTGCAACC +
Preference number: 4 (lower is better)
Translates to: SGDSHAAQCSVVGSRALSGAPTV*LACSAT
Trigger: GGTTGCAGAGCAGGCCAGGCAGACAGTGGGGGCTCC...GCTCAGAGCCCTGCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTCCCCACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp TGGGGACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCAGGGCTCTGAGCATGCTGCTTTGCCAGGGTaGTGCCTCCACCACCCCGCC +
Preference number: 4 (lower is better)
Translates to: WGLPRSAVLCCGQQGSEHAALPG*CLHHPA
Trigger: GGCGGGGTGGTGGAGGCAGCACCCTGGCAAAGCAGC...ATGCTCAGAGCCCTGCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CCA 90 bp AGTGGGGACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCAGGGCTCTGAGCACCGTCTGCCCCAGGTaGGTGACCACCTCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: SGDSHAAQCSVVGSRALSTVCPR*VTTSEA
Trigger: AGCCTCGGAGGTGGTCACCCACCTGGGGCAGACGGT...GCTCAGAGCCCTGCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTCCCCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp CCCATTGTCCCACCCCGGTCCCTGGGCCAGCTCTGGAATGAAGAGGTTGCTACATGCAGCGCTGCCAGTTaGCAGGCCGGGGCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: PIVPPRSLGQLWNEEVATCSAAS*QAGAPR
Trigger: CCTGGGGGCCCCGGCCTGCCAACTGGCAGCGCTGCA...TGTAGCAACCTCTTCATTCCAGAGCTGGCCCAGGGACCGGGGTGGGACAATGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CCA 90 bp CCAGGGTGGCCTTACTGCATGGCGAGACCCACCTCTCACTGGCTTTGCTGCAGCGTGGGGGCCGGCGGCTaGTCACGCACAGGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: PGWPYCMARPTSHWLCCSVGAGG*SRTGSP
Trigger: AGGAGAACCTGTGCGTGACCAGCCGCCGGCCCCCAC...GCTGCAGCAAAGCCAGTGAGAGGTGGGTCTCGCCATGCAGTAAGGCCACCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp CGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCTGCAGCGCTGCCAGTTaGCAGGCCGGGGCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: RGGCVSPSCGQGRVFPHTCSAAS*QAGAPR
Trigger: CCTGGGGGCCCCGGCCTGCCAACTGGCAGCGCTGCA...GGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR TCA 90 bp GGTGATGTTGCAGCGCTGCCAGTTGGCAGGCCGGGGCCCCCAGGAGCACAGGTGATCAGAGCTGGTCCATaGGCCTCATGCAGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: GDVAALPVGRPGPPGAQVIRAGP*ASCSLE
Trigger: TTCCAGGCTGCATGAGGCTCATGGACCAGCTCTGAT...CACCTGTGCTCCTGGGGGCCCCGGCCTGCCAACTGGCAGCGCTGCAACATCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542621.5
CDS-3UTR GCA 90 bp GCCTTACTGCATGGCGAGACCCACCTCTCACTGGCTTTGCTGCAGCTGCACAGGGCGATGTGCGGGCTGTaGTTCGTGGATGGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: ALLHGETHLSLALLQLHRAMCGL*FVDGRP
Trigger: CGGGCGGCCATCCACGAAGCACAGCCCGCACATCGC...CCTGTGCAGCTGCAGCAAAGCCAGTGAGAGGTGGGTCTCGCCATGCAGTAAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp GCCTTACTGCATGGCGAGACCCACCTCTCACTGGCTTTGCTGCAGCTGCACAGGACGCGGTCCATGGGGTaGCCTCCCACCGAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: ALLHGETHLSLALLQLHRTRSMG*PPTEEG
Trigger: CCCTTCCTCGGTGGGAGGCCACCCCATGGACCGCGT...CCTGTGCAGCTGCAGCAAAGCCAGTGAGAGGTGGGTCTCGCCATGCAGTAAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp GCCTTACTGCATGGCGAGACCCACCTCTCACTGGCTTTGCTGCAGCTGCACAGGGGTGGGCTTGCGGTGTaGCCTTCGAGAGCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: ALLHGETHLSLALLQLHRGGLAV*PSRASP
Trigger: GGGGGAGGCTCTCGAAGGCCACACCGCAAGCCCACC...CCTGTGCAGCTGCAGCAAAGCCAGTGAGAGGTGGGTCTCGCCATGCAGTAAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp AGTGGGGACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCAGGGCTCTGAGCGCTGATGGTAGGCCTTaGGTGGCCGATGGCCTCACA +
Preference number: 4 (lower is better)
Translates to: SGDSHAAQCSVVGSRALSADGRP*VADGLT
Trigger: TGTGAGGCCATCGGCCACCCAAGGCCTACCATCAGC...GCTCAGAGCCCTGCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTCCCCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp GGTGATGTTGCAGCGCTGCCAGTTGGCAGGCCGGGGCCCCCAGGAGCACAGGTGGCTCTCCATGAAGATTaGCCGCCCTGCAGGAGTACA +
Preference number: 4 (lower is better)
Translates to: GDVAALPVGRPGPPGAQVALHED*PPCRST
Trigger: TGTACTCCTGCAGGGCGGCCAATCTTCATGGAGAGC...CACCTGTGCTCCTGGGGGCCCCGGCCTGCCAACTGGCAGCGCTGCAACATCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR CCA 90 bp GGTGATGTTGCAGCGCTGCCAGTTGGCAGGCCGGGGCCCCCAGGAGCACAGGTGCCTTCTCGCAGTACCTaGTGGTGTCTCTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: GDVAALPVGRPGPPGAQVPSRST*WCLCTP
Trigger: TGGAGTGCAGAGACACCACCAGGTACTGCGAGAAGG...CACCTGTGCTCCTGGGGGCCCCGGCCTGCCAACTGGCAGCGCTGCAACATCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR TCA 90 bp GACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCAGGGCTCTGAGCATGCGCCAGGAGTACAGGCCCTaGTCCGAGGAGGACACGTTT +
Preference number: 4 (lower is better)
Translates to: DSHAAQCSVVGSRALSMRQEYRP*SEEDTF
Trigger: AAACGTGTCCTCCTCGGATCAGGGCCTGTACTCCTG...GCGCATGCTCAGAGCCCTGCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR TCA 90 bp GATAGCTTGGGAAGTGGGGACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCCGCAGTGGGCAGGGTTaGCCTCCGTGCTGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: DSLGSGDSHAAQCSVVGSRSGQG*PPCCSA
Trigger: TGCTGAACAGCACGGAGGTCAACCCTGCCCACTGCG...GCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTCCCCACTTCCCAAGCTATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR TCA 90 bp GGTGATGTTGCAGCGCTGCCAGTTGGCAGGCCGGGGCCCCCAGGAGCACAGGTGTGTTTTCACATGGGGTaGTGTTGCAGCGCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: GDVAALPVGRPGPPGAQVCFHMG*CCSAAS
Trigger: ACTGGCAGCGCTGCAACATCACCCCATGTGAAAACA...CACCTGTGCTCCTGGGGGCCCCGGCCTGCCAACTGGCAGCGCTGCAACATCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR TCA 90 bp AGTGGGGACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCAGGGCTCTGAGCGTTCTGCCAGCTCACTaGGACCCACTGCCAACTGCT +
Preference number: 4 (lower is better)
Translates to: SGDSHAAQCSVVGSRALSVLPAH*DPLPTA
Trigger: AGCAGTTGGCAGTGGGTCTCAGTGAGCTGGCAGAAC...GCTCAGAGCCCTGCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTCCCCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp CCCATTGTCCCACCCCGGTCCCTGGGCCAGCTCTGGAATGAAGAGGTTGCTACAACACGGCTGCCACTGTaGAGGGTACCAGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: PIVPPRSLGQLWNEEVATTRLPL*RVPGWG
Trigger: CCCCCAGCCTGGTACCCTGCACAGTGGCAGCCGTGT...TGTAGCAACCTCTTCATTCCAGAGCTGGCCCAGGGACCGGGGTGGGACAATGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp GATAGCTTGGGAAGTGGGGACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCGCAGGTGTAGACGCCTaGATCCGAGGGCTTGAGGCG +
Preference number: 4 (lower is better)
Translates to: DSLGSGDSHAAQCSVVGSAGVDA*IRGLEA
Trigger: CGCCTCAAGCCCTCGGATGCAGGCGTCTACACCTGC...GCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTCCCCACTTCCCAAGCTATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp GACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCAGGGCTCTGAGCATGCGCCCTTCGTGCAGATGGTaGGGGGAGCCCAGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: DSHAAQCSVVGSRALSMRPSCRW*GEPSLL
Trigger: AAGCAAACTGGGCTCCCCGCACCATCTGCACGAAGG...GCGCATGCTCAGAGCCCTGCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp TGGGGACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCAGGGCTCTGAGCATCGATGCAAGGCCCATTaGACTGGCCCCAGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: WGLPRSAVLCCGQQGSEHRCKAH*TGPSWR
Trigger: TCTCCAGCTGGGGCCAGTGCAATGGGCCTTGCATCG...ATGCTCAGAGCCCTGCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp GAGAGGGAGGGTGTACTGTGGACACGCATAAACCCATTGTCCCACCCCGGTCCCAGCCCCTGCTCACCCTaGCCCACTGGGGAACACCAC +
Preference number: 4 (lower is better)
Translates to: EREGVLWTRINPLSHPGPSPCSP*PTGEHH
Trigger: GTGGTGTTCCCCAGTGGGGCAGGGTGAGCAGGGGCT...GGGACCGGGGTGGGACAATGGGTTTATGCGTGTCCACAGTACACCCTCCCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CCA 90 bp ACGAGTCCCAGCAGTTTTAAGCAAGTCCCAGGCACTGACTCCTCGGCACTGCCTGGAGCACGCGGTCCATaGGGTGGCCTCCCACCGAGG +
Preference number: 4 (lower is better)
Translates to: TSPSSFKQVPGTDSSALPGARGP*GGLPPR
Trigger: CCTCGGTGGGAGGCCACCCCATGGACCGCGTGCTCC...AGGCAGTGCCGAGGAGTCAGTGCCTGGGACTTGCTTAAAACTGCTGGGACTCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CCA 90 bp GGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTAGGAGCACGCGGTCCATaGGGTGGCCTCCCACCGAGG +
Preference number: 4 (lower is better)
Translates to: GGCVSPSCGQGRVFPHTLGARGP*GGLPPR
Trigger: CCTCGGTGGGAGGCCACCCCATGGACCGCGTGCTCC...TAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp GATAGCTTGGGAAGTGGGGACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCGCACCGTGCTGGGCTTaGGCTGGCGACACAGCTCAT +
Preference number: 4 (lower is better)
Translates to: DSLGSGDSHAAQCSVVGSAPCWA*AGDTAH
Trigger: ATGAGCTGTGTCGCCAGCCCAAGCCCAGCACGGTGC...GCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTCCCCACTTCCCAAGCTATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp GGAGAGGGAGGGTGTACTGTGGACACGCATAAACCCATTGTCCCACCCCGGTCCGCACCACCGCCGTCTTaGGGAGCAGGTAGGCGAAGC +
Preference number: 4 (lower is better)
Translates to: GEGGCTVDTHKPIVPPRSAPPPS*GAGRRS
Trigger: GCTTCGCCTACCTGCTCCCCAAGACGGCGGTGGTGC...GGACCGGGGTGGGACAATGGGTTTATGCGTGTCCACAGTACACCCTCCCTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp GAGAGGGAGGGTGTACTGTGGACACGCATAAACCCATTGTCCCACCCCGGTCCCTCCGGTTGCACGCGATaGGCTGCACCGCAGGGCGAA +
Preference number: 4 (lower is better)
Translates to: EREGVLWTRINPLSHPGPSGCTR*AAPQGE
Trigger: TTCGCCCTGCGGTGCAGCCCATCGCGTGCAACCGGA...GGGACCGGGGTGGGACAATGGGTTTATGCGTGTCCACAGTACACCCTCCCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CCA 90 bp AGTGGGGACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCAGGGCTCTGAGCTCTGACCAGCAGTTCTaGGTGCTCACAGGCCTCGGA +
Preference number: 4 (lower is better)
Translates to: SGDSHAAQCSVVGSRALSSDQQF*VLTGLG
Trigger: TCCGAGGCCTGTGAGCACCCAGAACTGCTGGTCAGA...GCTCAGAGCCCTGCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTCCCCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CCA 90 bp GGTGATGTTGCAGCGCTGCCAGTTGGCAGGCCGGGGCCCCCAGGAGCACAGGTGTCTCGCAGTACCTGGTaGTGTCTCTGCACTCCATGT +
Preference number: 4 (lower is better)
Translates to: GDVAALPVGRPGPPGAQVSRSTW*CLCTPC
Trigger: ACATGGAGTGCAGAGACACCACCAGGTACTGCGAGA...CACCTGTGCTCCTGGGGGCCCCGGCCTGCCAACTGGCAGCGCTGCAACATCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR CCA 90 bp GACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCAGGGCTCTGAGCATGCGCAGGCTACAAACCTTCTaGCTCCCTGCTGTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: DSHAAQCSVVGSRALSMRRLQTF*LPAVRR
Trigger: CCTGCGGACAGCAGGGAGCCAGAAGGTTTGTAGCCT...GCGCATGCTCAGAGCCCTGCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CCA 90 bp GATAGCTTGGGAAGTGGGGACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCTCCCACCCCGGTCCCTaGGCCAGCTCTGGAATGAAG +
Preference number: 4 (lower is better)
Translates to: DSLGSGDSHAAQCSVVGSSHPGP*ASSGMK
Trigger: CTTCATTCCAGAGCTGGCCCAGGGACCGGGGTGGGA...GCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTCCCCACTTCCCAAGCTATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CCA 90 bp GCTCAGGGTACCCGGTGGGGCCATGATGATGAGAGGGAAGAGTGGACTTACTCTGGAGCACGCGGTCCATaGGGTGGCCTCCCACCTGGC +
Preference number: 4 (lower is better)
Translates to: AQGTRWGHDDEREEWTYSGARGP*GGLPPG
Trigger: GCCAGGTGGGAGGCCACCCCATGGACCGCGTGCTCC...AGAGTAAGTCCACTCTTCCCTCTCATCATCATGGCCCCACCGGGTACCCTGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR TCA 90 bp GACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCAGGGCTCTGAGCATGCGCGTGCTTCCCAGCTGGTaGTCGCAGCCAACAATTTGG +
Preference number: 4 (lower is better)
Translates to: DSHAAQCSVVGSRALSMRVLPSW*SQPTIW
Trigger: CCAAATTGTTGGCTGCGATCACCAGCTGGGAAGCAC...GCGCATGCTCAGAGCCCTGCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp GGAGAGGGAGGGTGTACTGTGGACACGCATAAACCCATTGTCCCACCCCGGTCCCCCCACCCCCGCAGGTaGGTGAGCATTCACTCCATG +
Preference number: 4 (lower is better)
Translates to: GEGGCTVDTHKPIVPPRSPHPRR*VSIHSM
Trigger: CATGGAGTGAATGCTCACGCACCTGCGGGGGTGGGG...GGACCGGGGTGGGACAATGGGTTTATGCGTGTCCACAGTACACCCTCCCTCTCC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp GAGTGTGGAGCTGCTCAGGGTACCCGGTGGGGCCATGATGATGAGAGGGAAGAGCTCCACACAGGAAACTaGCCGGCTCTGGATGCCCCC +
Preference number: 4 (lower is better)
Translates to: ECGAAQGTRWGHDDEREELHTGN*PALDAP
Trigger: GGGGGCATCCAGAGCCGGGCAGTTTCCTGTGTGGAG...CTCTTCCCTCTCATCATCATGGCCCCACCGGGTACCCTGAGCAGCTCCACACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR GCA 90 bp GATAGCTTGGGAAGTGGGGACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCAGCTTAATCACAAAGTaGTCCCGGGCCGGGCCCGCT +
Preference number: 4 (lower is better)
Translates to: DSLGSGDSHAAQCSVVGSSLITK*SRAGPA
Trigger: AGCGGGCCCGGCCCGGGAGCACTTTGTGATTAAGCT...GCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTCCCCACTTCCCAAGCTATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp GCCTTACTGCATGGCGAGACCCACCTCTCACTGGCTTTGCTGCAGCTGCACAGGAGCAAGGAGCCTTCGTaGAGATGGTGCGGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: ALLHGETHLSLALLQLHRSKEPS*RWCGEP
Trigger: GGGCTCCCCGCACCATCTGCACGAAGGCTCCTTGCT...CCTGTGCAGCTGCAGCAAAGCCAGTGAGAGGTGGGTCTCGCCATGCAGTAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp CGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCGGCAGTCTCTCCGGTTaGACGCGATGGGCTGCACCG +
Preference number: 4 (lower is better)
Translates to: RGGCVSPSCGQGRVFPHTGSLSG*TRWAAP
Trigger: CGGTGCAGCCCATCGCGTGCAACCGGAGAGACTGCC...GGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp GATAGCTTGGGAAGTGGGGACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCCCCCAGGAGCACAGGTaGTCAGGCACTGCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: DSLGSGDSHAAQCSVVGSPQEHR*SGTALL
Trigger: CAACAAGGCAGTGCCTGAGCACCTGTGCTCCTGGGG...GCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTCCCCACTTCCCAAGCTATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp CGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCGTGATGTTGCAGCGCTaGCAGTTGGCAGGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: RGGCVSPSCGQGRVFPHTVMLQR*QLAGRG
Trigger: GCCCCGGCCTGCCAACTGGCAGCGCTGCAACATCAC...GGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR GCA 90 bp GGAGAGGGAGGGTGTACTGTGGACACGCATAAACCCATTGTCCCACCCCGGTCCTCCCACGCAGCGCAGTaGTCTGTTGTGGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GEGGCTVDTHKPIVPPRSSHAAQ*SVVGSR
Trigger: CCTGCTGCCCACAACAGAGCACTGCGCTGCGTGGGA...GGACCGGGGTGGGACAATGGGTTTATGCGTGTCCACAGTACACCCTCCCTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp TGGGGACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCAGGGCTCTGAGCATCTGCAGTGTGTGAGCTaGTTTGCCAGGGTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: WGLPRSAVLCCGQQGSEHLQCVS*FARVLP
Trigger: AGGCAGCACCCTGGCAAAGCAGCTCACACACTGCAG...ATGCTCAGAGCCCTGCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CCA 90 bp TGCTGCCTCCACCACCCCGCCTTGCTAGATAAATACTACATGCCGGAGGACCTGGGACTTCAGGAGCTGTaGGGGCCGGCGGCTGGTCAC +
Preference number: 4 (lower is better)
Translates to: CCLHHPALLDKYYMPEDLGLQEL*GPAAGH
Trigger: GTGACCAGCCGCCGGCCCCCACAGCTCCTGAAGTCC...CAGGTCCTCCGGCATGTAGTATTTATCTAGCAAGGCGGGGTGGTGGAGGCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp TGGGCCATTCATGCTCAAAATGGCCCTGGCCCACAGCAGCAGTTAGTTAGTGCGGCGGGCTGTGCTTCGTaGATGGCCGCCCGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: WAIHAQNGPGPQQQLVSAAGCAS*MAARAL
Trigger: CAAGGCCCGGGCGGCCATCCACGAAGCACAGCCCGC...CGCACTAACTAACTGCTGCTGTGGGCCAGGGCCATTTTGAGCATGAATGGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp CCAGGGTGGCCTTACTGCATGGCGAGACCCACCTCTCACTGGCTTTGCTGCAGCTCCTGGTGCTCCAGGTaGCTGCGGAAGATCTCCTGG +
Preference number: 4 (lower is better)
Translates to: PGWPYCMARPTSHWLCCSSWCSR*LRKISW
Trigger: CCAGGAGATCTTCCGCAGCCACCTGGAGCACCAGGA...GCTGCAGCAAAGCCAGTGAGAGGTGGGTCTCGCCATGCAGTAAGGCCACCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp CCAGGGTGGCCTTACTGCATGGCGAGACCCACCTCTCACTGGCTTTGCTGCAGCTGTCCACAGGCCGCTTaGCGACCTGGGTGCACATGT +
Preference number: 4 (lower is better)
Translates to: PGWPYCMARPTSHWLCCSCPQAA*RPGCTC
Trigger: ACATGTGCACCCAGGTCGCCAAGCGGCCTGTGGACA...GCTGCAGCAAAGCCAGTGAGAGGTGGGTCTCGCCATGCAGTAAGGCCACCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp GAGAGGGAGGGTGTACTGTGGACACGCATAAACCCATTGTCCCACCCCGGTCCCCAAGGCCCATTGCACTaGCCCCAGCTGGAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: EREGVLWTRINPLSHPGPQGPLH*PQLEKA
Trigger: GGCCTTCTCCAGCTGGGGCCAGTGCAATGGGCCTTG...GGGACCGGGGTGGGACAATGGGTTTATGCGTGTCCACAGTACACCCTCCCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp GGTGATGTTGCAGCGCTGCCAGTTGGCAGGCCGGGGCCCCCAGGAGCACAGGTGGAACTGAGTGAGTTCTaGGCTAGTTTCTGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: GDVAALPVGRPGPPGAQVELSEF*ASFCLS
Trigger: GCTGAGGCAGAAACTAGCCCAGAACTCACTCAGTTC...CACCTGTGCTCCTGGGGGCCCCGGCCTGCCAACTGGCAGCGCTGCAACATCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542621.5
CDS-3UTR CCA 90 bp GACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCAGGGCTCTGAGCATGCGCGCATGCGCACATGCATaGGATCAGAGCTGGTCCATG +
Preference number: 4 (lower is better)
Translates to: DSHAAQCSVVGSRALSMRACAHA*DQSWSM
Trigger: CATGGACCAGCTCTGATCCCATGCATGTGCGCATGC...GCGCATGCTCAGAGCCCTGCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CCA 90 bp GACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCAGGGCTCTGAGCATGCGCAAAGAGGTGCCAGGGTaGCCTTACTGCATGGCGAGA +
Preference number: 4 (lower is better)
Translates to: DSHAAQCSVVGSRALSMRKEVPG*PYCMAR
Trigger: TCTCGCCATGCAGTAAGGCCACCCTGGCACCTCTTT...GCGCATGCTCAGAGCCCTGCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR TCA 90 bp GATAGCTTGGGAAGTGGGGACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCACACTCTGTCCAGTCTaGGAGAAGCCACTCGCTGGG +
Preference number: 4 (lower is better)
Translates to: DSLGSGDSHAAQCSVVGSTLCPV*EKPLAG
Trigger: CCCAGCGAGTGGCTTCTCTCAGACTGGACAGAGTGT...GCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTCCCCACTTCCCAAGCTATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR TCA 90 bp AGTGGGGACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCAGGGCTCTGAGCAAGATGCCTTCTGCATaGGCACCCCTGCCTCATTCT +
Preference number: 4 (lower is better)
Translates to: SGDSHAAQCSVVGSRALSKMPSA*APLPHS
Trigger: AGAATGAGGCAGGGGTGCTCATGCAGAAGGCATCTT...GCTCAGAGCCCTGCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTCCCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR TCA 90 bp CGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCGCAGTGGGCAGGGTTaGCCTCCGTGCTGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: RGGCVSPSCGQGRVFPHTRSGQG*PPCCSA
Trigger: TGCTGAACAGCACGGAGGTCAACCCTGCCCACTGCG...GGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000542621.5
CDS-3UTR TCA 90 bp GCCTTACTGCATGGCGAGACCCACCTCTCACTGGCTTTGCTGCAGCTGCACAGGTGTTGCACAGCTAGGTaGGGCCCGATGCAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: ALLHGETHLSLALLQLHRCCTAR*GPMQGP
Trigger: TGGGCCTTGCATCGGGCCTCACCTAGCTGTGCAACA...CCTGTGCAGCTGCAGCAAAGCCAGTGAGAGGTGGGTCTCGCCATGCAGTAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR TCA 90 bp CCATTGTCCCACCCCGGTCCCTGGGCCAGCTCTGGAATGAAGAGGTTGCTACAATCCGAGGTGGTTGCGTaGGTCCTTCGTGTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PLSHPGPWASSGMKRLLQSEVVA*VLRVAR
Trigger: CCTGGCCACACGAAGGACTCACGCAACCACCTCGGA...TTGTAGCAACCTCTTCATTCCAGAGCTGGCCCAGGGACCGGGGTGGGACAATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR TCA 90 bp AGCACAGGTGCTCAGGCACTGCCTTGTTGGTGCGGGCATGCACACACTCCACACTGTGGCTGCAGTGTGTaGGCTGCTTTGCCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: STGAQALPCWCGHAHTPHCGCSV*AALPGC
Trigger: GCACCCTGGCAAAGCAGCTCACACACTGCAGCCACA...GTGTGGAGTGTGTGCATGCCCGCACCAACAAGGCAGTGCCTGAGCACCTGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542621.5
CDS-3UTR GCA 90 bp CCATTGTCCCACCCCGGTCCCTGGGCCAGCTCTGGAATGAAGAGGTTGCTACAACTCCACACAGGAAACTaGCCGGCTCTGGATGCCCCC +
Preference number: 4 (lower is better)
Translates to: PLSHPGPWASSGMKRLLQLHTGN*PALDAP
Trigger: GGGGGCATCCAGAGCCGGGCAGTTTCCTGTGTGGAG...TTGTAGCAACCTCTTCATTCCAGAGCTGGCCCAGGGACCGGGGTGGGACAATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp CCAGGGTGGCCTTACTGCATGGCGAGACCCACCTCTCACTGGCTTTGCTGCAGCAAGCGGTTACAAGCTTaGACCGTGCTGGGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: PGWPYCMARPTSHWLCCSKRLQA*TVLGLG
Trigger: GCCCAAGCCCAGCACGGTGCAAGCTTGTAACCGCTT...GCTGCAGCAAAGCCAGTGAGAGGTGGGTCTCGCCATGCAGTAAGGCCACCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp CGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCGCTTCGAGTCTGGGTaGCTTCCCCGCAGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: RGGCVSPSCGQGRVFPHTRFESG*LPRSLW
Trigger: CCACAAGCTGCGGGGAAGGCACCCAGACTCGAAGCG...GGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp CGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCGGGCCGCTGAGATCTTaGGCAGGATGGTGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: RGGCVSPSCGQGRVFPHTGPLRS*AGWWAC
Trigger: GCAAGCCCACCATCCTGCGCAAGATCTCAGCGGCCC...GGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp AGCTTAGGTTCTGTCCGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGGCAGTCTCTCCGGTTaGACGCGATGGGCTGCACCG +
Preference number: 4 (lower is better)
Translates to: SLGSVRGGCVSPSCGQGRGSLSG*TRWAAP
Trigger: CGGTGCAGCCCATCGCGTGCAACCGGAGAGACTGCC...TCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCGGACAGAACCTAAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp TGGGGACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCAGGGCTCTGAGCATCTCTCCAGTGTACACTaGAGGCCTCTGACCAGCAGT +
Preference number: 4 (lower is better)
Translates to: WGLPRSAVLCCGQQGSEHLSSVH*RPLTSS
Trigger: ACTGCTGGTCAGAGGCCTGCAGTGTACACTGGAGAG...ATGCTCAGAGCCCTGCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp CCCATTGTCCCACCCCGGTCCCTGGGCCAGCTCTGGAATGAAGAGGTTGCTACACAGGTGCTCAGGCACTaGCTTGTTGGTGCGGGCATG +
Preference number: 4 (lower is better)
Translates to: PIVPPRSLGQLWNEEVATQVLRH*LVGAGM
Trigger: CATGCCCGCACCAACAAGGCAGTGCCTGAGCACCTG...TGTAGCAACCTCTTCATTCCAGAGCTGGCCCAGGGACCGGGGTGGGACAATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp AGCTTAGGTTCTGTCCGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTGATGTTGCAGCGCTaGCAGTTGGCAGGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: SLGSVRGGCVSPSCGQGRVMLQR*QLAGRG
Trigger: GCCCCGGCCTGCCAACTGGCAGCGCTGCAACATCAC...TCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCGGACAGAACCTAAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp GACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCAGGGCTCTGAGCATGCGCTTCTGGGCTAGTTTCTaGCTCAGCATGGTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: DSHAAQCSVVGSRALSMRFWASF*LSMVSP
Trigger: AGGGGACACCATGCTGAGGCAGAAACTAGCCCAGAA...GCGCATGCTCAGAGCCCTGCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp TGCTGCCTCCACCACCCCGCCTTGCTAGATAAATACTACATGCCGGAGGACCTGGCTTTGCCAGGGTGCTaGCTCCACCACCCCGCCTTG +
Preference number: 4 (lower is better)
Translates to: CCLHHPALLDKYYMPEDLALPGC*LHHPAL
Trigger: CAAGGCGGGGTGGTGGAGGCAGCACCCTGGCAAAGC...CAGGTCCTCCGGCATGTAGTATTTATCTAGCAAGGCGGGGTGGTGGAGGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp GAGTGGCATTTCATGAGGGGAGGCTTATCTGTGGGTAAGGGACTCTGGCCACCCGCTTTGCCAGGGTGCTaGCTCCACCACCCCGCCTTG +
Preference number: 4 (lower is better)
Translates to: EWHFMRGGLSVGKGLWPPALPGC*LHHPAL
Trigger: CAAGGCGGGGTGGTGGAGGCAGCACCCTGGCAAAGC...GGGTGGCCAGAGTCCCTTACCCACAGATAAGCCTCCCCTCATGAAATGCCACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp CCAGGGTGGCCTTACTGCATGGCGAGACCCACCTCTCACTGGCTTTGCTGCAGCCTGCAGTGTGTGAGCTaGTTTGCCAGGGTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: PGWPYCMARPTSHWLCCSLQCVS*FARVLP
Trigger: AGGCAGCACCCTGGCAAAGCAGCTCACACACTGCAG...GCTGCAGCAAAGCCAGTGAGAGGTGGGTCTCGCCATGCAGTAAGGCCACCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CCA 90 bp GACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCAGGGCTCTGAGCATGCGCGTGGGGCTTTGTTTTTaGGCTACAGCCTCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: DSHAAQCSVVGSRALSMRVGLCF*ATASCV
Trigger: CACACAGGAGGCTGTAGCCCAAAAACAAAGCCCCAC...GCGCATGCTCAGAGCCCTGCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp GATAGCTTGGGAAGTGGGGACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCCCGTTCTGGTGTTTGTaGGTCTGCAGGGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: DSLGSGDSHAAQCSVVGSPFWCL*VCRASF
Trigger: GAAGGAGGCCCTGCAGACCCACAAACACCAGAACGG...GCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTCCCCACTTCCCAAGCTATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp GACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCAGGGCTCTGAGCATGCGCTCTAGGATCAGCAGCTaGGTGCTCTCAGTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: DSHAAQCSVVGSRALSMRSRISS*VLSVSS
Trigger: AGAGCTGACTGAGAGCACCCAGCTGCTGATCCTAGA...GCGCATGCTCAGAGCCCTGCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CCA 90 bp CGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCTGCACTGGCCCCAGCTaGAGAAGGCCCACTCCACAC +
Preference number: 4 (lower is better)
Translates to: RGGCVSPSCGQGRVFPHTCTGPS*RRPTPH
Trigger: GTGTGGAGTGGGCCTTCTCCAGCTGGGGCCAGTGCA...GGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380545.9
ENST00000380548.9
CDS-3UTR CCA 90 bp GACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCAGGGCTCTGAGCATGCGCTGCTCAAAATGGCCCTaGCCCACAGCAGCAGTTAGT +
Preference number: 4 (lower is better)
Translates to: DSHAAQCSVVGSRALSMRCSKWP*PTAAVS
Trigger: ACTAACTGCTGCTGTGGGCCAGGGCCATTTTGAGCA...GCGCATGCTCAGAGCCCTGCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CCA 90 bp AGTGGGGACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCAGGGCTCTGAGCCATTCATGCTCAAAATaGCCCTGGCCCACAGCAGCA +
Preference number: 4 (lower is better)
Translates to: SGDSHAAQCSVVGSRALSHSCSK*PWPTAA
Trigger: TGCTGCTGTGGGCCAGGGCCATTTTGAGCATGAATG...GCTCAGAGCCCTGCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTCCCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CCA 90 bp GATAGCTTGGGAAGTGGGGACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCTCCCTGGCCCTTCGGTaGAGCAGCAAAGGTCCTAGA +
Preference number: 4 (lower is better)
Translates to: DSLGSGDSHAAQCSVVGSSLALR*SSKGPR
Trigger: TCTAGGACCTTTGCTGCTCCACCGAAGGGCCAGGGA...GCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTCCCCACTTCCCAAGCTATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CCA 90 bp AGTGGGGACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCAGGGCTCTGAGCTGCTCCAACCCAACATaGAGCTGGAGGATGCTTGCT +
Preference number: 4 (lower is better)
Translates to: SGDSHAAQCSVVGSRALSCSNPT*SWRMLA
Trigger: AGCAAGCATCCTCCAGCTCCATGTTGGGTTGGAGCA...GCTCAGAGCCCTGCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTCCCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
3UTR CAA 72 bp CTGCAGCTGCACAGGCAGGACGTTGACTCTGATAGCTaGGGAAGTGGGGACTCCCACGCAGCGCAGTGCTCT +
Preference number: 4 (lower is better)
Translates to: LQLHRQDVDSDS*GSGDSHAAQCS
Trigger: AGAGCACTGCGCTGCGTGGGAGTCCCCACTTCCCAAGCTATCAGAGTCAACGTCCTGCCTGTGCAGCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR TCA 90 bp GGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTACCCCCGCAGGTGCGTaGGCATTCACTCCATGGGCC +
Preference number: 4 (lower is better)
Translates to: GCVSPSCGQGRVFPHTLSTPAGA*AFTPWA
Trigger: GGCCCATGGAGTGAATGCTCACGCACCTGCGGGGGT...AGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR TCA 90 bp CCCATTGTCCCACCCCGGTCCCTGGGCCAGCTCTGGAATGAAGAGGTTGCTACAGAACGAGGGCTCCTCTaGCACAGCAGCTCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: PIVPPRSLGQLWNEEVATERGLL*HSSSFF
Trigger: GAAGAAGGAGCTGCTGTGTCAGAGGAGCCCTCGTTC...TGTAGCAACCTCTTCATTCCAGAGCTGGCCCAGGGACCGGGGTGGGACAATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR TCA 90 bp ACGAGTCCCAGCAGTTTTAAGCAAGTCCCAGGCACTGACTCCTCGGCACTGCCTGGAGCACCTGGCACCTaGCTATTCGCACCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: TSPSSFKQVPGTDSSALPGAPGT*LFAPGS
Trigger: GGACCCAGGTGCGAATAGTCAGGTGCCAGGTGCTCC...AGGCAGTGCCGAGGAGTCAGTGCCTGGGACTTGCTTAAAACTGCTGGGACTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR TCA 90 bp TGCTGCCTCCACCACCCCGCCTTGCTAGATAAATACTACATGCCGGAGGACCTGGGAGCACCTGGCACCTaGCTATTCGCACCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: CCLHHPALLDKYYMPEDLGAPGT*LFAPGS
Trigger: GGACCCAGGTGCGAATAGTCAGGTGCCAGGTGCTCC...CAGGTCCTCCGGCATGTAGTATTTATCTAGCAAGGCGGGGTGGTGGAGGCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR TCA 90 bp GAGAGGGAGGGTGTACTGTGGACACGCATAAACCCATTGTCCCACCCCGGTCCCCAGGAGTACAGGCCCTaGTCCGAGGAGGACACGTTT +
Preference number: 4 (lower is better)
Translates to: EREGVLWTRINPLSHPGPQEYRP*SEEDTF
Trigger: AAACGTGTCCTCCTCGGATCAGGGCCTGTACTCCTG...GGGACCGGGGTGGGACAATGGGTTTATGCGTGTCCACAGTACACCCTCCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR TCA 90 bp GAGAGGGAGGGTGTACTGTGGACACGCATAAACCCATTGTCCCACCCCGGTCCCTCAGTCAGCTCTCCATaGAGATTGGCCGCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: EREGVLWTRINPLSHPGPSVSSP*RLAALQ
Trigger: CTGCAGGGCGGCCAATCTTCATGGAGAGCTGACTGA...GGGACCGGGGTGGGACAATGGGTTTATGCGTGTCCACAGTACACCCTCCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR TCA 90 bp CCCATTGTCCCACCCCGGTCCCTGGGCCAGCTCTGGAATGAAGAGGTTGCTACACAGCGAGCAAGGCCCTaGTGTCTTCCAACTGTGTGG +
Preference number: 4 (lower is better)
Translates to: PIVPPRSLGQLWNEEVATQRARP*CLPTVW
Trigger: CCACACAGTTGGAAGACATCAGGGCCTTGCTCGCTG...TGTAGCAACCTCTTCATTCCAGAGCTGGCCCAGGGACCGGGGTGGGACAATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR TCA 90 bp GCCTTACTGCATGGCGAGACCCACCTCTCACTGGCTTTGCTGCAGCTGCACAGGCAGCGAGCAAGGCCCTaGTGTCTTCCAACTGTGTGG +
Preference number: 4 (lower is better)
Translates to: ALLHGETHLSLALLQLHRQRARP*CLPTVW
Trigger: CCACACAGTTGGAAGACATCAGGGCCTTGCTCGCTG...CCTGTGCAGCTGCAGCAAAGCCAGTGAGAGGTGGGTCTCGCCATGCAGTAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR TCA 90 bp CGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCTGTTGCACAGCTAGGTaGGGCCCGATGCAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: RGGCVSPSCGQGRVFPHTCCTAR*GPMQGP
Trigger: TGGGCCTTGCATCGGGCCTCACCTAGCTGTGCAACA...GGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR TCA 90 bp GGAGAGGGAGGGTGTACTGTGGACACGCATAAACCCATTGTCCCACCCCGGTCCACAGGGTCCACAGGCTaGCTCTCCAGTGTACACTGC +
Preference number: 4 (lower is better)
Translates to: GEGGCTVDTHKPIVPPRSTGSTG*LSSVHC
Trigger: GCAGTGTACACTGGAGAGTCAGCCTGTGGACCCTGT...GGACCGGGGTGGGACAATGGGTTTATGCGTGTCCACAGTACACCCTCCCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR TCA 90 bp GCCTTACTGCATGGCGAGACCCACCTCTCACTGGCTTTGCTGCAGCTGCACAGGGGACGTCCTTATGCTTaGAGGTGGAGGTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: ALLHGETHLSLALLQLHRGRPYA*RWRWRR
Trigger: CCTCCTCCACCTCCACCTTCAAGCATAAGGACGTCC...CCTGTGCAGCTGCAGCAAAGCCAGTGAGAGGTGGGTCTCGCCATGCAGTAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR TCA 90 bp CGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCTGTGGCTGCAGTGTGTaGGCTGCTTTGCCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: RGGCVSPSCGQGRVFPHTCGCSV*AALPGC
Trigger: GCACCCTGGCAAAGCAGCTCACACACTGCAGCCACA...GGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp GAGTGTGGAGCTGCTCAGGGTACCCGGTGGGGCCATGATGATGAGAGGGAAGAGCTTCACAGCTCTTGCTaGTCAGGCAGCGCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: ECGAAQGTRWGHDDEREELHSSC*SGSASE
Trigger: CTCTGAGGCGCTGCCTGAGCAGCAAGAGCTGTGAAG...CTCTTCCCTCTCATCATCATGGCCCCACCGGGTACCCTGAGCAGCTCCACACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR GCA 90 bp GACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCAGGGCTCTGAGCATGCGCCAGCCATGCGCTGCTTaGAAAGAACCTCACGTTTCT +
Preference number: 4 (lower is better)
Translates to: DSHAAQCSVVGSRALSMRQPCAA*KEPHVS
Trigger: AGAAACGTGAGGTTCTTTGCAAGCAGCGCATGGCTG...GCGCATGCTCAGAGCCCTGCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp GAGTGGCATTTCATGAGGGGAGGCTTATCTGTGGGTAAGGGACTCTGGCCACCCCAGGAGCACTTGCTCTaGACCCGGGTCCTCCTCCGA +
Preference number: 4 (lower is better)
Translates to: EWHFMRGGLSVGKGLWPPQEHLL*TRVLLR
Trigger: TCGGAGGAGGACCCGGGTGCAGAGCAAGTGCTCCTG...GGGTGGCCAGAGTCCCTTACCCACAGATAAGCCTCCCCTCATGAAATGCCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp ACTGAAAGAGAAAACACGCGGACGTCCTTATGCTTGAAGGTGGAGGTGGAGGAGGCCAGGGCCACCGTCTaGCCCAGGTGGGTGACCACC +
Preference number: 4 (lower is better)
Translates to: TERENTRTSLCLKVEVEEARATV*PRWVTT
Trigger: GGTGGTCACCCACCTGGGGCAGACGGTGGCCCTGGC...CTCCTCCACCTCCACCTTCAAGCATAAGGACGTCCGCGTGTTTTCTCTTTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp GGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATTGCACGCGATGGGCTaGACCGCAGGGCGAACCTTC +
Preference number: 4 (lower is better)
Translates to: GGCVSPSCGQGRVFPHTLLHAMG*TAGRTF
Trigger: GAAGGTTCGCCCTGCGGTGCAGCCCATCGCGTGCAA...TAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp CGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCAGGTGCTCAGGCACTaGCTTGTTGGTGCGGGCATG +
Preference number: 4 (lower is better)
Translates to: RGGCVSPSCGQGRVFPHTQVLRH*LVGAGM
Trigger: CATGCCCGCACCAACAAGGCAGTGCCTGAGCACCTG...GGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR GCA 90 bp TGGCAGAGTTTCAGCTGTTTCACCTTCTCGCAGTACCTGGTGGTGTCTCTGCACCAGCCTGGAAGCCCCTaGTCACCCTGCCCCACTGGG +
Preference number: 4 (lower is better)
Translates to: WQSFSCFTFSQYLVVSLHQPGSP*SPCPTG
Trigger: CCCAGTGGGGCAGGGTGAGCAGGGGCTTCCAGGCTG...GTGCAGAGACACCACCAGGTACTGCGAGAAGGTGAAACAGCTGAAACTCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542621.5
CDS-3UTR GCA 90 bp CGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCCAGGGTGGCCTTACTaGATGGCGAGACCCACCTCT +
Preference number: 4 (lower is better)
Translates to: RGGCVSPSCGQGRVFPHTPGWPY*MARPTS
Trigger: AGAGGTGGGTCTCGCCATGCAGTAAGGCCACCCTGG...GGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp TGGGCCATTCATGCTCAAAATGGCCCTGGCCCACAGCAGCAGTTAGTTAGTGCGACATGCCGGAGGACCTaGAGACCCTGGGGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: WAIHAQNGPGPQQQLVSATCRRT*RPWGGG
Trigger: GCCTCCACCCCAGGGTCTGCAGGTCCTCCGGCATGT...CGCACTAACTAACTGCTGCTGTGGGCCAGGGCCATTTTGAGCATGAATGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp GATAGCTTGGGAAGTGGGGACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCCCCAAACCTAGGTTCTaGCAGCTCACTGAGACCCAC +
Preference number: 4 (lower is better)
Translates to: DSLGSGDSHAAQCSVVGSPKPRF*QLTETH
Trigger: GTGGGTCTCAGTGAGCTGGCAGAACCTAGGTTTGGG...GCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTCCCCACTTCCCAAGCTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp GGACCACGAGTCCCAGCAGTTTTAAGCAAGTCCCAGGCACTGACTCCTCGGCACCTCACCACAGCCTCCTaGACACCTCCTCCACAGGAC +
Preference number: 4 (lower is better)
Translates to: GPRVPAVLSKSQALTPRHLTTAS*TPPPQD
Trigger: GTCCTGTGGAGGAGGTGTCCAGGAGGCTGTGGTGAG...GTGCCGAGGAGTCAGTGCCTGGGACTTGCTTAAAACTGCTGGGACTCGTGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CCA 90 bp TGCTGCCTCCACCACCCCGCCTTGCTAGATAAATACTACATGCCGGAGGACCTGCCCCGCCACACGTTCTaGAACACGGCTGCCACTGTG +
Preference number: 4 (lower is better)
Translates to: CCLHHPALLDKYYMPEDLPRHTF*NTAATV
Trigger: CACAGTGGCAGCCGTGTTCCAGAACGTGTGGCGGGG...CAGGTCCTCCGGCATGTAGTATTTATCTAGCAAGGCGGGGTGGTGGAGGCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp GGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTGCTGTGCTTCGTGGATaGCCGCCCGGGCCTTGCACA +
Preference number: 4 (lower is better)
Translates to: GCVSPSCGQGRVFPHTLSAVLRG*PPGPCT
Trigger: TGTGCAAGGCCCGGGCGGCCATCCACGAAGCACAGC...AGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp CCATTGTCCCACCCCGGTCCCTGGGCCAGCTCTGGAATGAAGAGGTTGCTACAAAGGCGAGAGAGTCACTaGGGAAGTCCTGCGCTCCGA +
Preference number: 4 (lower is better)
Translates to: PLSHPGPWASSGMKRLLQRRESH*GSPALR
Trigger: TCGGAGCGCAGGACTTCCCCAGTGACTCTCTCGCCT...TTGTAGCAACCTCTTCATTCCAGAGCTGGCCCAGGGACCGGGGTGGGACAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp CGAGCATTCTGCTTCCCACCCAAACCTAGGTTCTGCCAGCTCACTGAGACCCACGAGGCTGAGAGCTGCTaGGCCGCTGAGATCTTGCGC +
Preference number: 4 (lower is better)
Translates to: RAFCFPPKPRFCQLTETHEAESC*AAEILR
Trigger: GCGCAAGATCTCAGCGGCCCAGCAGCTCTCAGCCTC...GTGGGTCTCAGTGAGCTGGCAGAACCTAGGTTTGGGTGGGAAGCAGAATGCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp CGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCGAGCCTTCGTGCAGATaGTGCGGGGAGCCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: RGGCVSPSCGQGRVFPHTEPSCR*CGEPSL
Trigger: CAAACTGGGCTCCCCGCACCATCTGCACGAAGGCTC...GGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR CCA 90 bp GGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTTCCGGTTGCACGCGATaGGCTGCACCGCAGGGCGAA +
Preference number: 4 (lower is better)
Translates to: GCVSPSCGQGRVFPHTLSSGCTR*AAPQGE
Trigger: TTCGCCCTGCGGTGCAGCCCATCGCGTGCAACCGGA...AGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CCA 90 bp GGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTGTCACCCTGCGGGTCTaGACACCTCCCCCACAGCTC +
Preference number: 4 (lower is better)
Translates to: GCVSPSCGQGRVFPHTLSVTLRV*TPPPQL
Trigger: GAGCTGTGGGGGAGGTGTCCAGACCCGCAGGGTGAC...AGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000380545.9
ENST00000380548.9
CDS-3UTR CCA 90 bp CCAGGGTGGCCTTACTGCATGGCGAGACCCACCTCTCACTGGCTTTGCTGCAGCGGGTGCACATGTCATTaGACACAGGGGTGGAGATCC +
Preference number: 4 (lower is better)
Translates to: PGWPYCMARPTSHWLCCSGCTCH*TQGWRS
Trigger: GGATCTCCACCCCTGTGTCCAATGACATGTGCACCC...GCTGCAGCAAAGCCAGTGAGAGGTGGGTCTCGCCATGCAGTAAGGCCACCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp CGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCGGCCGCTTGGCGACCTaGGTGCACATGTCATTGGAC +
Preference number: 4 (lower is better)
Translates to: RGGCVSPSCGQGRVFPHTGRLAT*VHMSLD
Trigger: GTCCAATGACATGTGCACCCAGGTCGCCAAGCGGCC...GGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380545.9
ENST00000380548.9
CDS-3UTR CCA 90 bp CGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCTGTCCACAGGCCGCTTaGCGACCTGGGTGCACATGT +
Preference number: 4 (lower is better)
Translates to: RGGCVSPSCGQGRVFPHTCPQAA*RPGCTC
Trigger: ACATGTGCACCCAGGTCGCCAAGCGGCCTGTGGACA...GGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380545.9
ENST00000380548.9
CDS-3UTR CCA 90 bp CGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCTGCTGGTTACAGGCCTaGGTGTCCACAGGCCGCTTG +
Preference number: 4 (lower is better)
Translates to: RGGCVSPSCGQGRVFPHTCWLQA*VSTGRL
Trigger: CAAGCGGCCTGTGGACACCCAGGCCTGTAACCAGCA...GGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380545.9
ENST00000380548.9
CDS-3UTR CCA 90 bp GGTGATGTTGCAGCGCTGCCAGTTGGCAGGCCGGGGCCCCCAGGAGCACAGGTGCAGCGAGATTTAAACTaGCTGAGTTGGCAGAGTTTC +
Preference number: 4 (lower is better)
Translates to: GDVAALPVGRPGPPGAQVQRDLN*LSWQSF
Trigger: GAAACTCTGCCAACTCAGCCAGTTTAAATCTCGCTG...CACCTGTGCTCCTGGGGGCCCCGGCCTGCCAACTGGCAGCGCTGCAACATCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR CCA 90 bp GCCTTACTGCATGGCGAGACCCACCTCTCACTGGCTTTGCTGCAGCTGCACAGGAGGCTACAAACCTTCTaGCTCCCTGCTGTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: ALLHGETHLSLALLQLHRRLQTF*LPAVRR
Trigger: CCTGCGGACAGCAGGGAGCCAGAAGGTTTGTAGCCT...CCTGTGCAGCTGCAGCAAAGCCAGTGAGAGGTGGGTCTCGCCATGCAGTAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR TCA 90 bp TGCCTCAGAAGGACAGGCTTCCTCTTTGGGACTGCAGCTGGTAACCTGACTTGTACCCCCGCAGGTGCGTaGGCATTCACTCCATGGGCC +
Preference number: 4 (lower is better)
Translates to: CLRRTGFLFGTAAGNLTCTPAGA*AFTPWA
Trigger: GGCCCATGGAGTGAATGCTCACGCACCTGCGGGGGT...ACAAGTCAGGTTACCAGCTGCAGTCCCAAAGAGGAAGCCTGTCCTTCTGAGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380570.8
CDS-3UTR TCA 90 bp GAGTGGCATTTCATGAGGGGAGGCTTATCTGTGGGTAAGGGACTCTGGCCACCCGGCACAGGGTGGAATTaGCAACCGTTGAGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: EWHFMRGGLSVGKGLWPPGTGWN*QPLRGR
Trigger: CCGGCCTCTCAACGGTTGTCAATTCCACCCTGTGCC...GGGTGGCCAGAGTCCCTTACCCACAGATAAGCCTCCCCTCATGAAATGCCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR TCA 90 bp GAGAGGGAGGGTGTACTGTGGACACGCATAAACCCATTGTCCCACCCCGGTCCCTCCGCAGGGAGCTGCTaGAGCCAGACACGTGTTTAT +
Preference number: 4 (lower is better)
Translates to: EREGVLWTRINPLSHPGPSAGSC*SQTRVY
Trigger: ATAAACACGTGTCTGGCTTCAGCAGCTCCCTGCGGA...GGGACCGGGGTGGGACAATGGGTTTATGCGTGTCCACAGTACACCCTCCCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR TCA 90 bp CCTCCTTCCACATTAGCCAGCAGCCTTCATTGTCTTGTGGTGCTGCTGAGTTGCTCTGCCCCAGGTGGGTaGCCACCTCCGAGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: PPSTLASSLHCLVVLLSCSAPGG*PPPRLR
Trigger: TCTCAGCCTCGGAGGTGGTCACCCACCTGGGGCAGA...GCAACTCAGCAGCACCACAAGACAATGAAGGCTGCTGGCTAATGTGGAAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR TCA 90 bp CGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCTCAGTCAGCTCTCCATaGAGATTGGCCGCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: RGGCVSPSCGQGRVFPHTSVSSP*RLAALQ
Trigger: CTGCAGGGCGGCCAATCTTCATGGAGAGCTGACTGA...GGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR TCA 90 bp CGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCGTTACCACAGGAGGCTaGGCAGGTTGCCAGTCTGTC +
Preference number: 4 (lower is better)
Translates to: RGGCVSPSCGQGRVFPHTVTTGG*AGCQSV
Trigger: GACAGACTGGCAACCTGCTCAGCCTCCTGTGGTAAC...GGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000542621.5
CDS-3UTR TCA 90 bp GTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTTCACGCCGCAGTGGGCAGGGTTaGCCTCCGTGCTGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: VSPSCGQGRVFPHTLSSRRSGQG*PPCCSA
Trigger: TGCTGAACAGCACGGAGGTCAACCCTGCCCACTGCG...GCGTGAAGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542621.5
CDS-3UTR TCA 90 bp CGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCGAGGCTTTCAGCTTTTaGCAGGTCACCCTGCGGGTC +
Preference number: 4 (lower is better)
Translates to: RGGCVSPSCGQGRVFPHTEAFSF*QVTLRV
Trigger: GACCCGCAGGGTGACCTGTCAAAAGCTGAAAGCCTC...GGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380545.9
ENST00000380548.9
CDS-3UTR TCA 90 bp CGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCACAGGGTCCACAGGCTaGCTCTCCAGTGTACACTGC +
Preference number: 4 (lower is better)
Translates to: RGGCVSPSCGQGRVFPHTTGSTG*LSSVHC
Trigger: GCAGTGTACACTGGAGAGTCAGCCTGTGGACCCTGT...GGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR TCA 90 bp CCATTGTCCCACCCCGGTCCCTGGGCCAGCTCTGGAATGAAGAGGTTGCTACAAGGACGTCCTTATGCTTaGAGGTGGAGGTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: PLSHPGPWASSGMKRLLQGRPYA*RWRWRR
Trigger: CCTCCTCCACCTCCACCTTCAAGCATAAGGACGTCC...TTGTAGCAACCTCTTCATTCCAGAGCTGGCCCAGGGACCGGGGTGGGACAATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR TCA 90 bp GGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTTGGGCAGCAGGGCTCTaGGCATGCGCACATGCATGG +
Preference number: 4 (lower is better)
Translates to: GCVSPSCGQGRVFPHTLSWAAGL*ACAHAW
Trigger: CCATGCATGTGCGCATGCTCAGAGCCCTGCTGCCCA...AGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR TCA 90 bp GAGAGGGAGGGTGTACTGTGGACACGCATAAACCCATTGTCCCACCCCGGTCCCGGGCCAGCTCTGGAATaGAGAGGTTGCTACAACCTG +
Preference number: 4 (lower is better)
Translates to: EREGVLWTRINPLSHPGPGPALE*RGCYNL
Trigger: CAGGTTGTAGCAACCTCTTCATTCCAGAGCTGGCCC...GGGACCGGGGTGGGACAATGGGTTTATGCGTGTCCACAGTACACCCTCCCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp AGCTTAGGTTCTGTCCGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAACAGGCACGCTGGGATaGTGGCTTGGGCCCTTCACA +
Preference number: 4 (lower is better)
Translates to: SLGSVRGGCVSPSCGQGRTGTLG*WLGPFT
Trigger: TGTGAAGGGCCCAAGCCAGCATCCCAGCGTGCCTGT...TCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCGGACAGAACCTAAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp AGCTTAGGTTCTGTCCGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTCGAGCTGATGAGGTaGTGGCCGTCCTTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: SLGSVRGGCVSPSCGQGRVELMR*WPSFSQ
Trigger: CTGGGAGAAGGACGGCCAGCACCTCATCAGCTCGAC...TCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCGGACAGAACCTAAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp TGCTGCCTCCACCACCCCGCCTTGCTAGATAAATACTACATGCCGGAGGACCTGCCCGCTTCTCCGCCTTaGTGCCGTTGGAGAAGATCC +
Preference number: 4 (lower is better)
Translates to: CCLHHPALLDKYYMPEDLPASPP*CRWRRS
Trigger: GGATCTTCTCCAACGGCAGCAAGGCGGAGAAGCGGG...CAGGTCCTCCGGCATGTAGTATTTATCTAGCAAGGCGGGGTGGTGGAGGCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp GCCTTACTGCATGGCGAGACCCACCTCTCACTGGCTTTGCTGCAGCTGCACAGGATGGTGAAGGGCAGGTaGAGGAGCACTTGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: ALLHGETHLSLALLQLHRMVKGR*RSTCSA
Trigger: TGCAGAGCAAGTGCTCCTGCACCTGCCCTTCACCAT...CCTGTGCAGCTGCAGCAAAGCCAGTGAGAGGTGGGTCTCGCCATGCAGTAAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp GGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCCGAGGCTGAGAGCTaGTGGGCCGCTGAGATCTTG +
Preference number: 4 (lower is better)
Translates to: GGCVSPSCGQGRVFPHTLSEAES*WAAEIL
Trigger: CAAGATCTCAGCGGCCCAGCAGCTCTCAGCCTCGGA...TAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp GGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTAGCAAGGAGCCTTCGTaGAGATGGTGCGGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: GCVSPSCGQGRVFPHTLSSKEPS*RWCGEP
Trigger: GGGCTCCCCGCACCATCTGCACGAAGGCTCCTTGCT...AGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR GCA 90 bp GTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTTCACGCAGCAAGGAGCCTTCGTaGAGATGGTGCGGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: VSPSCGQGRVFPHTLSSRSKEPS*RWCGEP
Trigger: GGGCTCCCCGCACCATCTGCACGAAGGCTCCTTGCT...GCGTGAAGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR GCA 90 bp CCCATTGTCCCACCCCGGTCCCTGGGCCAGCTCTGGAATGAAGAGGTTGCTACAGGATCAGCAGCTGGGTaGTCTCAGTCAGCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: PIVPPRSLGQLWNEEVATGSAAG*SQSALH
Trigger: ATGGAGAGCTGACTGAGAGCACCCAGCTGCTGATCC...TGTAGCAACCTCTTCATTCCAGAGCTGGCCCAGGGACCGGGGTGGGACAATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp CCCATTGTCCCACCCCGGTCCCTGGGCCAGCTCTGGAATGAAGAGGTTGCTACACTGCATGAGCACCCCTaGCTCATTCTGAGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: PIVPPRSLGQLWNEEVATLHEHP*LILSKA
Trigger: TGCCTTGCTCAGAATGAGGCAGGGGTGCTCATGCAG...TGTAGCAACCTCTTCATTCCAGAGCTGGCCCAGGGACCGGGGTGGGACAATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp CCTCCTTCCACATTAGCCAGCAGCCTTCATTGTCTTGTGGTGCTGCTGAGTTGCGGCAGTCTCTCCGGTTaGACGCGATGGGCTGCACCG +
Preference number: 4 (lower is better)
Translates to: PPSTLASSLHCLVVLLSCGSLSG*TRWAAP
Trigger: CGGTGCAGCCCATCGCGTGCAACCGGAGAGACTGCC...GCAACTCAGCAGCACCACAAGACAATGAAGGCTGCTGGCTAATGTGGAAGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp CGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCACTCCACACACAGCTaGTGGTTACAGGCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: RGGCVSPSCGQGRVFPHTHSTHS*WLQAWV
Trigger: CACCCAGGCCTGTAACCAGCAGCTGTGTGTGGAGTG...GGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380545.9
ENST00000380548.9
CDS-3UTR GCA 90 bp GGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTACGATGCAAGGCCCATTaGACTGGCCCCAGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: GGCVSPSCGQGRVFPHTLRCKAH*TGPSWR
Trigger: TCTCCAGCTGGGGCCAGTGCAATGGGCCTTGCATCG...TAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380545.9
ENST00000380548.9
CDS-3UTR GCA 90 bp CGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCACCAGCAGTTCTGGGTaGTCACAGGCCTCGGAAGAG +
Preference number: 4 (lower is better)
Translates to: RGGCVSPSCGQGRVFPHTTSSSG*SQASEE
Trigger: CTCTTCCGAGGCCTGTGAGCACCCAGAACTGCTGGT...GGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR GCA 90 bp GGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATTGTTGGTGCGGGCATaGACACACTCCACACGCCGG +
Preference number: 4 (lower is better)
Translates to: GGCVSPSCGQGRVFPHTLLLVRA*THSTRR
Trigger: CCGGCGTGTGGAGTGTGTGCATGCCCGCACCAACAA...TAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR GCA 90 bp AGTGGGGACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCAGGGCTCTGAGCACCTGGTGGTGTCTCTaGACTCCATGTTTTCACATG +
Preference number: 4 (lower is better)
Translates to: SGDSHAAQCSVVGSRALSTWWCL*TPCFHM
Trigger: CATGTGAAAACATGGAGTGCAGAGACACCACCAGGT...GCTCAGAGCCCTGCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTCCCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp GGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTTCCCACGCAGCGCAGTaGTCTGTTGTGGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GCVSPSCGQGRVFPHTLSSHAAQ*SVVGSR
Trigger: CCTGCTGCCCACAACAGAGCACTGCGCTGCGTGGGA...AGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp GGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTACCAGGGTGGCCTTACTaGATGGCGAGACCCACCTCT +
Preference number: 4 (lower is better)
Translates to: GGCVSPSCGQGRVFPHTLPGWPY*MARPTS
Trigger: AGAGGTGGGTCTCGCCATGCAGTAAGGCCACCCTGG...TAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp CCATTGTCCCACCCCGGTCCCTGGGCCAGCTCTGGAATGAAGAGGTTGCTACAACCCCTTCCCTGGGGCTaGTCTACAGGGACATCTTCT +
Preference number: 4 (lower is better)
Translates to: PLSHPGPWASSGMKRLLQPLPWG*STGTSS
Trigger: AGAAGATGTCCCTGTAGAGCAGCCCCAGGGAAGGGG...TTGTAGCAACCTCTTCATTCCAGAGCTGGCCCAGGGACCGGGGTGGGACAATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542621.5
CDS-3UTR CCA 90 bp GGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTAATGGCGCTTCGAGTCTaGGTGCCTTCCCCGCAGCTT +
Preference number: 4 (lower is better)
Translates to: GGCVSPSCGQGRVFPHTLMALRV*VPSPQL
Trigger: AAGCTGCGGGGAAGGCACCCAGACTCGAAGCGCCAT...TAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp TGCTGCCTCCACCACCCCGCCTTGCTAGATAAATACTACATGCCGGAGGACCTGGAGCCTTCGTGCAGATaGTGCGGGGAGCCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: CCLHHPALLDKYYMPEDLEPSCR*CGEPSL
Trigger: CAAACTGGGCTCCCCGCACCATCTGCACGAAGGCTC...CAGGTCCTCCGGCATGTAGTATTTATCTAGCAAGGCGGGGTGGTGGAGGCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CCA 90 bp GGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATGCTGGTTACAGGCCTaGGTGTCCACAGGCCGCTTG +
Preference number: 4 (lower is better)
Translates to: GGCVSPSCGQGRVFPHTLCWLQA*VSTGRL
Trigger: CAAGCGGCCTGTGGACACCCAGGCCTGTAACCAGCA...TAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380545.9
ENST00000380548.9
CDS-3UTR CCA 90 bp CGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCTCCACACACAGCTGCTaGTTACAGGCCTGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: RGGCVSPSCGQGRVFPHTSTHSC*LQAWVS
Trigger: GGACACCCAGGCCTGTAACCAGCAGCTGTGTGTGGA...GGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380545.9
ENST00000380548.9
CDS-3UTR CCA 90 bp GGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTCAAGGCCCATTGCACTaGCCCCAGCTGGAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: GCVSPSCGQGRVFPHTLSQGPLH*PQLEKA
Trigger: GGCCTTCTCCAGCTGGGGCCAGTGCAATGGGCCTTG...AGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380545.9
ENST00000380548.9
CDS-3UTR CCA 90 bp CGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCAGGCACTGCCTTGTTaGTGCGGGCATGCACACACT +
Preference number: 4 (lower is better)
Translates to: RGGCVSPSCGQGRVFPHTQALPC*CGHAHT
Trigger: AGTGTGTGCATGCCCGCACCAACAAGGCAGTGCCTG...GGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR CCA 90 bp TCCACAGCAGCGAGATTTAAACTGGCTGAGTTGGCAGAGTTTCAGCTGTTTCACTGCAGCGCTGCCAGTTaGCAGGCCGGGGCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: STAARFKLAELAEFQLFHCSAAS*QAGAPR
Trigger: CCTGGGGGCCCCGGCCTGCCAACTGGCAGCGCTGCA...GTGAAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAATCTCGCTGCTGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR CCA 90 bp GGAATTTGTCCAATGTTTGCACCAATAGGCTACAAACCTTCTGGCTCCCTGCTGTGCAGCGCTGCCAGTTaGCAGGCCGGGGCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: GICPMFAPIGYKPSGSLLCSAAS*QAGAPR
Trigger: CCTGGGGGCCCCGGCCTGCCAACTGGCAGCGCTGCA...CAGCAGGGAGCCAGAAGGTTTGTAGCCTATTGGTGCAAACATTGGACAAATTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CCA 90 bp GGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTTCCCACCCCGGTCCCTaGGCCAGCTCTGGAATGAAG +
Preference number: 4 (lower is better)
Translates to: GCVSPSCGQGRVFPHTLSSHPGP*ASSGMK
Trigger: CTTCATTCCAGAGCTGGCCCAGGGACCGGGGTGGGA...AGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CCA 90 bp GTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTTCACGCTTTGAGGACCTGCAGACCCTaGGGTGGAGGCTGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: VLRVARVEFFPTPYLHALRTCRP*GGGWER
Trigger: CCTCTCCCAGCCTCCACCCCAGGGTCTGCAGGTCCT...CAAAGCGTGAAGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542621.5
CDS-3UTR TCA 90 bp GAGTGTGGAGCTGCTCAGGGTACCCGGTGGGGCCATGATGATGAGAGGGAAGAGACTCTTCCACTGAAGTaGCATGCCCCTGGATGTCCT +
Preference number: 4 (lower is better)
Translates to: ECGAAQGTRWGHDDEREETLPLK*HAPGCP
Trigger: AGGACATCCAGGGGCATGTCACTTCAGTGGAAGAGT...CTCTTCCCTCTCATCATCATGGCCCCACCGGGTACCCTGAGCAGCTCCACACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR TCA 90 bp TGGGCCATTCATGCTCAAAATGGCCCTGGCCCACAGCAGCAGTTAGTTAGTGCGGGACCACACGGTATCTaGGGCCCTGGCCACATGTCA +
Preference number: 4 (lower is better)
Translates to: WAIHAQNGPGPQQQLVSAGPHGI*GPGHMS
Trigger: TGACATGTGGCCAGGGCCTCAGATACCGTGTGGTCC...CGCACTAACTAACTGCTGCTGTGGGCCAGGGCCATTTTGAGCATGAATGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR TCA 90 bp CGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCAGGAGGACACGTTTGTaGGCAGCAAGGAGCCTTCGT +
Preference number: 4 (lower is better)
Translates to: RGGCVSPSCGQGRVFPHTRRTRL*AARSLR
Trigger: ACGAAGGCTCCTTGCTGCTCACAAACGTGTCCTCCT...GGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR TCA 90 bp CGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCAGGAGACGTCAGCACTaGAGGAAGGTTCGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: RGGCVSPSCGQGRVFPHTRRRQH*RKVRSS
Trigger: ACTGGACCGAACCTTCCTTCAGTGCTGACGTCTCCT...GGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR TCA 90 bp AGCACAGGTGCTCAGGCACTGCCTTGTTGGTGCGGGCATGCACACACTCCACACGCATTTATAGCTTCTTaGATCCCCCTTCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: STGAQALPCWCGHAHTPHAFIAS*IPLPWG
Trigger: GCCCCAGGGAAGGGGGATTCAAGAAGCTATAAATGC...GTGTGGAGTGTGTGCATGCCCGCACCAACAAGGCAGTGCCTGAGCACCTGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542621.5
CDS-3UTR GCA 90 bp AGCTTAGGTTCTGTCCGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGACAGTGTGCCAGGAGTTaGCCGACGGCAGCATTCCAT +
Preference number: 4 (lower is better)
Translates to: SLGSVRGGCVSPSCGQGRQCARS*PTAAFH
Trigger: ATGGAATGCTGCCGTCGGGCAACTCCTGGCACACTG...TCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCGGACAGAACCTAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp GCTCAGGGTACCCGGTGGGGCCATGATGATGAGAGGGAAGAGTGGACTTACTCTCAGTGTGCCAGGAGTTaGCCGACGGCAGCATTCCAT +
Preference number: 4 (lower is better)
Translates to: AQGTRWGHDDEREEWTYSQCARS*PTAAFH
Trigger: ATGGAATGCTGCCGTCGGGCAACTCCTGGCACACTG...AGAGTAAGTCCACTCTTCCCTCTCATCATCATGGCCCCACCGGGTACCCTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR GCA 90 bp CTCAGAAGGACAGGCTTCCTCTTTGGGACTGCAGCTGGTAACCTGACTTGTCCCGAAAGAGGAGCAGTGTaGCAGGAGTTGCCCGACGGC +
Preference number: 4 (lower is better)
Translates to: LRRTGFLFGTAAGNLTCPERGAV*QELPDG
Trigger: GCCGTCGGGCAACTCCTGGCACACTGCTCCTCTTTC...GGGACAAGTCAGGTTACCAGCTGCAGTCCCAAAGAGGAAGCCTGTCCTTCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380570.8
CDS-3UTR GCA 90 bp GGAGAGGGAGGGTGTACTGTGGACACGCATAAACCCATTGTCCCACCCCGGTCCCAGCAACCACACGGTTaGTCCTCAGATCGTAGCACT +
Preference number: 4 (lower is better)
Translates to: GEGGCTVDTHKPIVPPRSQQPHG*SSDRST
Trigger: AGTGCTACGATCTGAGGAGCAACCGTGTGGTTGCTG...GGACCGGGGTGGGACAATGGGTTTATGCGTGTCCACAGTACACCCTCCCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp GAGAGGGAGGGTGTACTGTGGACACGCATAAACCCATTGTCCCACCCCGGTCCCGACGGCAGCATTCCATaGTTGGATCCTTGCCGGAAT +
Preference number: 4 (lower is better)
Translates to: EREGVLWTRINPLSHPGPDGSIP*LDPCRN
Trigger: ATTCCGGCAAGGATCCAAGCATGGAATGCTGCCGTC...GGGACCGGGGTGGGACAATGGGTTTATGCGTGTCCACAGTACACCCTCCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp GAGTGTGGAGCTGCTCAGGGTACCCGGTGGGGCCATGATGATGAGAGGGAAGAGGACGGCAGCATTCCATaGTTGGATCCTTGCCGGAAT +
Preference number: 4 (lower is better)
Translates to: ECGAAQGTRWGHDDEREEDGSIP*LDPCRN
Trigger: ATTCCGGCAAGGATCCAAGCATGGAATGCTGCCGTC...CTCTTCCCTCTCATCATCATGGCCCCACCGGGTACCCTGAGCAGCTCCACACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR GCA 90 bp GGAGAGGGAGGGTGTACTGTGGACACGCATAAACCCATTGTCCCACCCCGGTCCTGGAAAGCAGGTGGCTaGAGAAGACGTCTCTGGTCT +
Preference number: 4 (lower is better)
Translates to: GEGGCTVDTHKPIVPPRSWKAGG*RRRLWS
Trigger: AGACCAGAGACGTCTTCTGCAGCCACCTGCTTTCCA...GGACCGGGGTGGGACAATGGGTTTATGCGTGTCCACAGTACACCCTCCCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp AGCTTAGGTTCTGTCCGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTCTGGAACACGGCTaGCACTGTGCAGGGTACCAG +
Preference number: 4 (lower is better)
Translates to: SLGSVRGGCVSPSCGQGRVLEHG*HCAGYQ
Trigger: CTGGTACCCTGCACAGTGGCAGCCGTGTTCCAGAAC...TCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCGGACAGAACCTAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp CCCATTGTCCCACCCCGGTCCCTGGGCCAGCTCTGGAATGAAGAGGTTGCTACAGCAGCTTCCTCTGCCTaGGAGTCTGTATGTAGACCT +
Preference number: 4 (lower is better)
Translates to: PIVPPRSLGQLWNEEVATAASSA*ESVCRP
Trigger: AGGTCTACATACAGACTCGCAGGCAGAGGAAGCTGC...TGTAGCAACCTCTTCATTCCAGAGCTGGCCCAGGGACCGGGGTGGGACAATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp TGCCTGGCCTGCTCTGCAACCTCCTTTAGACATCTGTCCTTTCCTTTCCCAACAGGGGCCACCGTGACGTaGGTCGAGCTGATGAGGTGC +
Preference number: 4 (lower is better)
Translates to: CLACSATSFRHLSFPFPTGATVT*VELMRC
Trigger: GCACCTCATCAGCTCGACGCACGTCACGGTGGCCCC...TGTTGGGAAAGGAAAGGACAGATGTCTAAAGGAGGTTGCAGAGCAGGCCAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp AGCTTAGGTTCTGTCCGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGCTTCTCCGCCTTGCTaGCGTTGGAGAAGATCCCGT +
Preference number: 4 (lower is better)
Translates to: SLGSVRGGCVSPSCGQGRASPPC*RWRRSR
Trigger: ACGGGATCTTCTCCAACGGCAGCAAGGCGGAGAAGC...TCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCGGACAGAACCTAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp ATGAAGAGGTTGCTACAACCTGACAGCCTGACAGATACTCTCTGGCACAGTGACCGCAGCTCCTCGGGCTaGTGGGAGAGGTTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: MKRLLQPDSLTDTLWHSDRSSSG*WERFPR
Trigger: CCTGGGGAACCTCTCCCAGCAGCCCGAGGAGCTGCG...GTCACTGTGCCAGAGAGTATCTGTCAGGCTGTCAGGTTGTAGCAACCTCTTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp CTGCCTCAGCATGGTGTCCCCTCCCCATTTGTCCTAACTGTGACTAAAGGGACAGGGCCACCAGGTGCTTaGTGTAGAGGTCGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: LPQHGVPSPFVLTVTKGTGPPGA*CRGRAA
Trigger: AGCTGCGCGACCTCTACAGCAAGCACCTGGTGGCCC...TGTCCCTTTAGTCACAGTTAGGACAAATGGGGAGGGGACACCATGCTGAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp CCTCCTTCCACATTAGCCAGCAGCCTTCATTGTCTTGTGGTGCTGCTGAGTTGCGGTGCTCCAGGTGGCTaGGGAAGATCTCCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: PPSTLASSLHCLVVLLSCGAPGG*GRSPGP
Trigger: TGGCCCAGGAGATCTTCCGCAGCCACCTGGAGCACC...GCAACTCAGCAGCACCACAAGACAATGAAGGCTGCTGGCTAATGTGGAAGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp AGTGGGGACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCAGGGCTCTGAGCAGGCATTGGTGGCATTaGAAGTGTAGAAACCCACAT +
Preference number: 4 (lower is better)
Translates to: SGDSHAAQCSVVGSRALSRHWWH*KCRNPH
Trigger: ATGTGGGTTTCTACACTTGCAATGCCACCAATGCCT...GCTCAGAGCCCTGCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTCCCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp TGCTGCCTCCACCACCCCGCCTTGCTAGATAAATACTACATGCCGGAGGACCTGCCTTCGTGCAGATGGTaGGGGGAGCCCAGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: CCLHHPALLDKYYMPEDLPSCRW*GEPSLL
Trigger: AAGCAAACTGGGCTCCCCGCACCATCTGCACGAAGG...CAGGTCCTCCGGCATGTAGTATTTATCTAGCAAGGCGGGGTGGTGGAGGCAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp CCAGGGTGGCCTTACTGCATGGCGAGACCCACCTCTCACTGGCTTTGCTGCAGCCCCACCGCTAAGGTTTaGAACTTGAAGGATCTGTCC +
Preference number: 4 (lower is better)
Translates to: PGWPYCMARPTSHWLCCSPTAKV*NLKDLS
Trigger: GGACAGATCCTTCAAGTTGCAAACCTTAGCGGTGGG...GCTGCAGCAAAGCCAGTGAGAGGTGGGTCTCGCCATGCAGTAAGGCCACCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp GGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTACACTCCACACACAGCTaGTGGTTACAGGCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: GGCVSPSCGQGRVFPHTLHSTHS*WLQAWV
Trigger: CACCCAGGCCTGTAACCAGCAGCTGTGTGTGGAGTG...TAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380545.9
ENST00000380548.9
CDS-3UTR GCA 90 bp TGGGCCATTCATGCTCAAAATGGCCCTGGCCCACAGCAGCAGTTAGTTAGTGCGTTGTTGGTGCGGGCATaGACACACTCCACACGCCGG +
Preference number: 4 (lower is better)
Translates to: WAIHAQNGPGPQQQLVSALLVRA*THSTRR
Trigger: CCGGCGTGTGGAGTGTGTGCATGCCCGCACCAACAA...CGCACTAACTAACTGCTGCTGTGGGCCAGGGCCATTTTGAGCATGAATGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp GGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTCCCCAGGAGCACAGGTaGTCAGGCACTGCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: GCVSPSCGQGRVFPHTLSPQEHR*SGTALL
Trigger: CAACAAGGCAGTGCCTGAGCACCTGTGCTCCTGGGG...AGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR GCA 90 bp TGGGCCATTCATGCTCAAAATGGCCCTGGCCCACAGCAGCAGTTAGTTAGTGCGCCCCAGGAGCACAGGTaGTCAGGCACTGCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: WAIHAQNGPGPQQQLVSAPQEHR*SGTALL
Trigger: CAACAAGGCAGTGCCTGAGCACCTGTGCTCCTGGGG...CGCACTAACTAACTGCTGCTGTGGGCCAGGGCCATTTTGAGCATGAATGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp CCATTGTCCCACCCCGGTCCCTGGGCCAGCTCTGGAATGAAGAGGTTGCTACAATGGCTTTGCTGCAGCTaGACAGGCAGGACGTTGACT +
Preference number: 4 (lower is better)
Translates to: PLSHPGPWASSGMKRLLQWLCCS*TGRTLT
Trigger: AGTCAACGTCCTGCCTGTGCAGCTGCAGCAAAGCCA...TTGTAGCAACCTCTTCATTCCAGAGCTGGCCCAGGGACCGGGGTGGGACAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp TCACGCTTTGCCACAAGTTCCACAGCAGCGAGATTTAAACTGGCTGAGTTGGCAGCTGCTTTGCCAGGGTaGTGCCTCCACCACCCCGCC +
Preference number: 4 (lower is better)
Translates to: SRFATSSTAARFKLAELAAALPG*CLHHPA
Trigger: GGCGGGGTGGTGGAGGCAGCACCCTGGCAAAGCAGC...TGCCAACTCAGCCAGTTTAAATCTCGCTGCTGTGGAACTTGTGGCAAAGCGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542621.5
CDS-3UTR CCA 90 bp CCCATGTCTGGTTCACTCCTGATGTGCCTCAGAAGGACAGGCTTCCTCTTTGGGCGGAGCGTGCGGTCCTaGAACTCAGGAGCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: PMSGSLLMCLRRTGFLFGRSVRS*NSGAGK
Trigger: CTTTCCTGCTCCTGAGTTCCAGGACCGCACGCTCCG...CCCAAAGAGGAAGCCTGTCCTTCTGAGGCACATCAGGAGTGAACCAGACATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380570.8
CDS-3UTR CCA 90 bp AGTGGGGACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCAGGGCTCTGAGCGTTTATAGCAGGGAGTaGGTACGATGCATTCCTCTT +
Preference number: 4 (lower is better)
Translates to: SGDSHAAQCSVVGSRALSVYSRE*VRCIPL
Trigger: AAGAGGAATGCATCGTACCCACTCCCTGCTATAAAC...GCTCAGAGCCCTGCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTCCCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp CCAGGGTGGCCTTACTGCATGGCGAGACCCACCTCTCACTGGCTTTGCTGCAGCAGCTTGTTTGAACCATaGCAACTTGGCCTCGACTGG +
Preference number: 4 (lower is better)
Translates to: PGWPYCMARPTSHWLCCSSLFEP*QLGLDW
Trigger: CCAGTCGAGGCCAAGTTGCCATGGTTCAAACAAGCT...GCTGCAGCAAAGCCAGTGAGAGGTGGGTCTCGCCATGCAGTAAGGCCACCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp AGCTTAGGTTCTGTCCGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGATGCAGAAGACGTCTCTaGTCTGTAGGCCGACCCCAC +
Preference number: 4 (lower is better)
Translates to: SLGSVRGGCVSPSCGQGRCRRRL*SVGRPH
Trigger: GTGGGGTCGGCCTACAGACCAGAGACGTCTTCTGCA...TCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCGGACAGAACCTAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp GACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCAGGGCTCTGAGCATGCGCATCCCAAGGCATTGGTaGCATTGCAAGTGTAGAAAC +
Preference number: 4 (lower is better)
Translates to: DSHAAQCSVVGSRALSMRIPRHW*HCKCRN
Trigger: GTTTCTACACTTGCAATGCCACCAATGCCTTGGGAT...GCGCATGCTCAGAGCCCTGCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp GGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTGAGCCTTCGTGCAGATaGTGCGGGGAGCCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: GCVSPSCGQGRVFPHTLSEPSCR*CGEPSL
Trigger: CAAACTGGGCTCCCCGCACCATCTGCACGAAGGCTC...AGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR CCA 90 bp GGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTGACCAGCAGTTCTaGGTGCTCACAGGCCTCGGA +
Preference number: 4 (lower is better)
Translates to: GGCVSPSCGQGRVFPHTLSDQQF*VLTGLG
Trigger: TCCGAGGCCTGTGAGCACCCAGAACTGCTGGTCAGA...TAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR CCA 90 bp GAGTGGCATTTCATGAGGGGAGGCTTATCTGTGGGTAAGGGACTCTGGCCACCCCAGGCACTGCCTTGTTaGTGCGGGCATGCACACACT +
Preference number: 4 (lower is better)
Translates to: EWHFMRGGLSVGKGLWPPQALPC*CGHAHT
Trigger: AGTGTGTGCATGCCCGCACCAACAAGGCAGTGCCTG...GGGTGGCCAGAGTCCCTTACCCACAGATAAGCCTCCCCTCATGAAATGCCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CCA 90 bp GATAGCTTGGGAAGTGGGGACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCGAACTGAGTGAGTTCTaGGCTAGTTTCTGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: DSLGSGDSHAAQCSVVGSELSEF*ASFCLS
Trigger: GCTGAGGCAGAAACTAGCCCAGAACTCACTCAGTTC...GCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTCCCCACTTCCCAAGCTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CCA 90 bp ACTGAAAGAGAAAACACGCGGACGTCCTTATGCTTGAAGGTGGAGGTGGAGGAGAGGACCTGCAGACCCTaGGGTGGAGGCTGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: TERENTRTSLCLKVEVEERTCRP*GGGWER
Trigger: CCTCTCCCAGCCTCCACCCCAGGGTCTGCAGGTCCT...CTCCTCCACCTCCACCTTCAAGCATAAGGACGTCCGCGTGTTTTCTCTTTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CCA 90 bp GCTCAGGGTACCCGGTGGGGCCATGATGATGAGAGGGAAGAGTGGACTTACTCTGGCCTCCCACCTGGCTaGACAAGGATCCAAGTTGCA +
Preference number: 4 (lower is better)
Translates to: AQGTRWGHDDEREEWTYSGLPPG*TRIQVA
Trigger: TGCAACTTGGATCCTTGTCCAGCCAGGTGGGAGGCC...AGAGTAAGTCCACTCTTCCCTCTCATCATCATGGCCCCACCGGGTACCCTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
3UTR CAA 72 bp TCTCACTGGCTTTGCTGCAGCTGCACAGGCAGGACGTaGACTCTGATAGCTTGGGAAGTGGGGACTCCCACG +
Preference number: 4 (lower is better)
Translates to: SHWLCCSCTGRT*TLIAWEVGTPT
Trigger: CGTGGGAGTCCCCACTTCCCAAGCTATCAGAGTCAACGTCCTGCCTGTGCAGCTGCAGCAAAGCCAGTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR TCA 90 bp GAGAGGGAGGGTGTACTGTGGACACGCATAAACCCATTGTCCCACCCCGGTCCCACTGGCCATGGTGCTTaGCATCATTATGAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: EREGVLWTRINPLSHPGPTGHGA*HHYELS
Trigger: GCTCAGCTCATAATGATGTCAAGCACCATGGCCAGT...GGGACCGGGGTGGGACAATGGGTTTATGCGTGTCCACAGTACACCCTCCCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR TCA 90 bp ACGAGTCCCAGCAGTTTTAAGCAAGTCCCAGGCACTGACTCCTCGGCACTGCCTGTGCTTCCCAGCTGGTaGTCGCAGCCAACAATTTGG +
Preference number: 4 (lower is better)
Translates to: TSPSSFKQVPGTDSSALPVLPSW*SQPTIW
Trigger: CCAAATTGTTGGCTGCGATCACCAGCTGGGAAGCAC...AGGCAGTGCCGAGGAGTCAGTGCCTGGGACTTGCTTAAAACTGCTGGGACTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR TCA 90 bp GGAGAGGGAGGGTGTACTGTGGACACGCATAAACCCATTGTCCCACCCCGGTCCTCCAAGTTGCACTCCTaGAGCTTGGGTTTGGGTTTG +
Preference number: 4 (lower is better)
Translates to: GEGGCTVDTHKPIVPPRSSKLHS*SLGLGL
Trigger: CAAACCCAAACCCAAGCTTCAGGAGTGCAACTTGGA...GGACCGGGGTGGGACAATGGGTTTATGCGTGTCCACAGTACACCCTCCCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR TCA 90 bp GAGTGTGGAGCTGCTCAGGGTACCCGGTGGGGCCATGATGATGAGAGGGAAGAGTTTCCACTCTTCCACTaGAGTGACATGCCCCTGGAT +
Preference number: 4 (lower is better)
Translates to: ECGAAQGTRWGHDDEREEFPLFH*SDMPLD
Trigger: ATCCAGGGGCATGTCACTTCAGTGGAAGAGTGGAAA...CTCTTCCCTCTCATCATCATGGCCCCACCGGGTACCCTGAGCAGCTCCACACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR TCA 90 bp GGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTAGGTCAGCCACGGACTaGGAGAAAGACAGGAGCACC +
Preference number: 4 (lower is better)
Translates to: GCVSPSCGQGRVFPHTLSRSATD*EKDRST
Trigger: GGTGCTCCTGTCTTTCTCTCAGTCCGTGGCTGACCT...AGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR TCA 90 bp AGCTTAGGTTCTGTCCGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAAGAACCTCACGTTTCTaGACACCCCCGCCACACGTT +
Preference number: 4 (lower is better)
Translates to: SLGSVRGGCVSPSCGQGRRTSRF*TPPPHV
Trigger: AACGTGTGGCGGGGGTGTTCAGAAACGTGAGGTTCT...TCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCGGACAGAACCTAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR TCA 90 bp GGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTCAGGAGTACAGGCCCTaGTCCGAGGAGGACACGTTT +
Preference number: 4 (lower is better)
Translates to: GCVSPSCGQGRVFPHTLSQEYRP*SEEDTF
Trigger: AAACGTGTCCTCCTCGGATCAGGGCCTGTACTCCTG...AGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR TCA 90 bp CCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTTCACGCTTTGCCTCAGTCAGCTCTCCATaGAGATTGGCCGCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: PSCGQGRVFPHTLSSRFASVSSP*RLAALQ
Trigger: CTGCAGGGCGGCCAATCTTCATGGAGAGCTGACTGA...GGCAAAGCGTGAAGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR TCA 90 bp GGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTCAGCGAGCAAGGCCCTaGTGTCTTCCAACTGTGTGG +
Preference number: 4 (lower is better)
Translates to: GCVSPSCGQGRVFPHTLSQRARP*CLPTVW
Trigger: CCACACAGTTGGAAGACATCAGGGCCTTGCTCGCTG...AGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR TCA 90 bp CCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTTCACGCTTTGCCCAGCGAGCAAGGCCCTaGTGTCTTCCAACTGTGTGG +
Preference number: 4 (lower is better)
Translates to: PSCGQGRVFPHTLSSRFAQRARP*CLPTVW
Trigger: CCACACAGTTGGAAGACATCAGGGCCTTGCTCGCTG...GGCAAAGCGTGAAGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR TCA 90 bp TGCTGCCTCCACCACCCCGCCTTGCTAGATAAATACTACATGCCGGAGGACCTGAGGAGACGTCAGCACTaGAGGAAGGTTCGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: CCLHHPALLDKYYMPEDLRRRQH*RKVRSS
Trigger: ACTGGACCGAACCTTCCTTCAGTGCTGACGTCTCCT...CAGGTCCTCCGGCATGTAGTATTTATCTAGCAAGGCGGGGTGGTGGAGGCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR TCA 90 bp CGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCATATTAGGGACAGGGTaGCCTTTGATGGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: RGGCVSPSCGQGRVFPHTILGTG*PLMGQP
Trigger: TGGCTGCCCCATCAAAGGTCACCCTGTCCCTAATAT...GGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR TCA 90 bp GGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTCCAGCTGCCAAGATGTaGTGCGTCAGTCCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: GCVSPSCGQGRVFPHTLSPAAKM*CVSPVA
Trigger: TGCCACAGGACTGACGCATCACATCTTGGCAGCTGG...AGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR TCA 90 bp CGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCAGCTGAATTCCCCTTaGGACCCACCGCTAAGGTTT +
Preference number: 4 (lower is better)
Translates to: RGGCVSPSCGQGRVFPHTQLNSP*DPPLRF
Trigger: AAACCTTAGCGGTGGGTCTCAAGGGGAATTCAGCTG...GGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR TCA 90 bp GGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTAACCCCTGCCTCATTCTaGGCAAGGCAGCTGAATTCC +
Preference number: 4 (lower is better)
Translates to: GGCVSPSCGQGRVFPHTLTPASF*ARQLNS
Trigger: GGAATTCAGCTGCCTTGCTCAGAATGAGGCAGGGGT...TAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR TCA 90 bp GGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTACAGGGTCCACAGGCTaGCTCTCCAGTGTACACTGC +
Preference number: 4 (lower is better)
Translates to: GCVSPSCGQGRVFPHTLSTGSTG*LSSVHC
Trigger: GCAGTGTACACTGGAGAGTCAGCCTGTGGACCCTGT...AGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR TCA 90 bp CGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCTGTTTTCACATGGGGTaGTGTTGCAGCGCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: RGGCVSPSCGQGRVFPHTCFHMG*CCSAAS
Trigger: ACTGGCAGCGCTGCAACATCACCCCATGTGAAAACA...GGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR TCA 90 bp GGAGAGGGAGGGTGTACTGTGGACACGCATAAACCCATTGTCCCACCCCGGTCCTGTCCTCCAGCTAACTaGAAGAGAAAACACGCGGAC +
Preference number: 4 (lower is better)
Translates to: GEGGCTVDTHKPIVPPRSCPPAN*KRKHAD
Trigger: GTCCGCGTGTTTTCTCTTTCAGTTAGCTGGAGGACA...GGACCGGGGTGGGACAATGGGTTTATGCGTGTCCACAGTACACCCTCCCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp CTCAGAAGGACAGGCTTCCTCTTTGGGACTGCAGCTGGTAACCTGACTTGTCCCAGCTGGGATTTATACTaGCCTCGGACCAGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: LRRTGFLFGTAAGNLTCPSWDLY*PRTSRQ
Trigger: CTGCCGGCTGGTCCGAGGGCAGTATAAATCCCAGCT...GGGACAAGTCAGGTTACCAGCTGCAGTCCCAAAGAGGAAGCCTGTCCTTCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380570.8
CDS-3UTR GCA 90 bp GAGTGGCATTTCATGAGGGGAGGCTTATCTGTGGGTAAGGGACTCTGGCCACCCTCCACTGAAGTGACATaGCCCTGGATGTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: EWHFMRGGLSVGKGLWPPSTEVT*PWMSSS
Trigger: GGAGGAGGACATCCAGGGGCATGTCACTTCAGTGGA...GGGTGGCCAGAGTCCCTTACCCACAGATAAGCCTCCCCTCATGAAATGCCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp GGACCACGAGTCCCAGCAGTTTTAAGCAAGTCCCAGGCACTGACTCCTCGGCACAAAATGTTGCAGGGCTaGGCGATGGGCATCTTAGGG +
Preference number: 4 (lower is better)
Translates to: GPRVPAVLSKSQALTPRHKMLQG*AMGILG
Trigger: CCCTAAGATGCCCATCGCGCAGCCCTGCAACATTTT...GTGCCGAGGAGTCAGTGCCTGGGACTTGCTTAAAACTGCTGGGACTCGTGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR GCA 90 bp CGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCAAAATGTTGCAGGGCTaGGCGATGGGCATCTTAGGG +
Preference number: 4 (lower is better)
Translates to: RGGCVSPSCGQGRVFPHTKMLQG*AMGILG
Trigger: CCCTAAGATGCCCATCGCGCAGCCCTGCAACATTTT...GGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp GGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTAAGCTCGTCGAAATCCTaGAGGCCACCAAAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: GGCVSPSCGQGRVFPHTLSSSKS*RPPKSP
Trigger: TGGGCTCTTTGGTGGCCTGCAGGATTTCGACGAGCT...TAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp GAGAGGGAGGGTGTACTGTGGACACGCATAAACCCATTGTCCCACCCCGGTCCCGACAGTCATCTTTCTTaGATGCTTGCTGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: EREGVLWTRINPLSHPGPDSHLS*MLAGRQ
Trigger: CTGCCTGCCAGCAAGCATGCAAGAAAGATGACTGTC...GGGACCGGGGTGGGACAATGGGTTTATGCGTGTCCACAGTACACCCTCCCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp TGCCTGGCCTGCTCTGCAACCTCCTTTAGACATCTGTCCTTTCCTTTCCCAACATCGTCCAGGCGCCGCTaGTCGGTCACCATGGTGAAG +
Preference number: 4 (lower is better)
Translates to: CLACSATSFRHLSFPFPTSSRRR*SVTMVK
Trigger: CTTCACCATGGTGACCGAGCAGCGGCGCCTGGACGA...TGTTGGGAAAGGAAAGGACAGATGTCTAAAGGAGGTTGCAGAGCAGGCCAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp GGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTCCTTCGTGCAGATGGTaGGGGGAGCCCAGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: GCVSPSCGQGRVFPHTLSPSCRW*GEPSLL
Trigger: AAGCAAACTGGGCTCCCCGCACCATCTGCACGAAGG...AGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR GCA 90 bp GGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTGAAGATTGGCCGCCCTaGAGGAGTACAGGCCCTGAT +
Preference number: 4 (lower is better)
Translates to: GCVSPSCGQGRVFPHTLSEDWPP*RSTGPD
Trigger: ATCAGGGCCTGTACTCCTGCAGGGCGGCCAATCTTC...AGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR GCA 90 bp GGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTAGGATCAGCAGCTGGGTaGTCTCAGTCAGCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: GGCVSPSCGQGRVFPHTLGSAAG*SQSALH
Trigger: ATGGAGAGCTGACTGAGAGCACCCAGCTGCTGATCC...TAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR GCA 90 bp GGAGAGGGAGGGTGTACTGTGGACACGCATAAACCCATTGTCCCACCCCGGTCCAAGGATCTGTCCAGCTaGCAAGATGTGATGCGTCAG +
Preference number: 4 (lower is better)
Translates to: GEGGCTVDTHKPIVPPRSKDLSS*QDVMRQ
Trigger: CTGACGCATCACATCTTGGCAGCTGGACAGATCCTT...GGACCGGGGTGGGACAATGGGTTTATGCGTGTCCACAGTACACCCTCCCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp GGAGAGGGAGGGTGTACTGTGGACACGCATAAACCCATTGTCCCACCCCGGTCCCCCACCGCTAAGGTTTaGAACTTGAAGGATCTGTCC +
Preference number: 4 (lower is better)
Translates to: GEGGCTVDTHKPIVPPRSPTAKV*NLKDLS
Trigger: GGACAGATCCTTCAAGTTGCAAACCTTAGCGGTGGG...GGACCGGGGTGGGACAATGGGTTTATGCGTGTCCACAGTACACCCTCCCTCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp GGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTAGCTTGGCGACCTGGGTaGACATGTCATTGGACACAG +
Preference number: 4 (lower is better)
Translates to: GGCVSPSCGQGRVFPHTLAWRPG*TCHWTQ
Trigger: CTGTGTCCAATGACATGTGCACCCAGGTCGCCAAGC...TAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380545.9
ENST00000380548.9
CDS-3UTR GCA 90 bp AGCTTAGGTTCTGTCCGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGCTTGGCGACCTGGGTaGACATGTCATTGGACACAG +
Preference number: 4 (lower is better)
Translates to: SLGSVRGGCVSPSCGQGRAWRPG*TCHWTQ
Trigger: CTGTGTCCAATGACATGTGCACCCAGGTCGCCAAGC...TCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCGGACAGAACCTAAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp GGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTACCAGCAGTTCTGGGTaGTCACAGGCCTCGGAAGAG +
Preference number: 4 (lower is better)
Translates to: GCVSPSCGQGRVFPHTLSTSSSG*SQASEE
Trigger: CTCTTCCGAGGCCTGTGAGCACCCAGAACTGCTGGT...AGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR GCA 90 bp GGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTACTCTCCAGTGTACACTaGAGGCCTCTGACCAGCAGT +
Preference number: 4 (lower is better)
Translates to: GGCVSPSCGQGRVFPHTLLSSVH*RPLTSS
Trigger: ACTGCTGGTCAGAGGCCTGCAGTGTACACTGGAGAG...TAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR GCA 90 bp GTTGGCAGAGTTTCAGCTGTTTCACCTTCTCGCAGTACCTGGTGGTGTCTCTGCTTGTTGGTGCGGGCATaGACACACTCCACACGCCGG +
Preference number: 4 (lower is better)
Translates to: VGRVSAVSPSRSTWWCLCLLVRA*THSTRR
Trigger: CCGGCGTGTGGAGTGTGTGCATGCCCGCACCAACAA...GCAGAGACACCACCAGGTACTGCGAGAAGGTGAAACAGCTGAAACTCTGCCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR GCA 90 bp GAGAGGGAGGGTGTACTGTGGACACGCATAAACCCATTGTCCCACCCCGGTCCCCCTATCTTCACGCTTTaGCACAAGTTCCACAGCAGC +
Preference number: 4 (lower is better)
Translates to: EREGVLWTRINPLSHPGPPIFTL*HKFHSS
Trigger: GCTGCTGTGGAACTTGTGGCAAAGCGTGAAGATAGG...GGGACCGGGGTGGGACAATGGGTTTATGCGTGTCCACAGTACACCCTCCCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp GCTCAGGGTACCCGGTGGGGCCATGATGATGAGAGGGAAGAGTGGACTTACTCTACAGCTCTGATCTGCTaGCATGAAGCCACAGGGCTC +
Preference number: 4 (lower is better)
Translates to: AQGTRWGHDDEREEWTYSTALIC*HEATGL
Trigger: GAGCCCTGTGGCTTCATGGCAGCAGATCAGAGCTGT...AGAGTAAGTCCACTCTTCCCTCTCATCATCATGGCCCCACCGGGTACCCTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR GCA 90 bp GGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTCCCCTTCCCTGGGGCTaGTCTACAGGGACATCTTCT +
Preference number: 4 (lower is better)
Translates to: GCVSPSCGQGRVFPHTLSPLPWG*STGTSS
Trigger: AGAAGATGTCCCTGTAGAGCAGCCCCAGGGAAGGGG...AGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000380545.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR GCA 90 bp CCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTTCACGCTTTGCCCCCCTTCCCTGGGGCTaGTCTACAGGGACATCTTCT +
Preference number: 4 (lower is better)
Translates to: PSCGQGRVFPHTLSSRFAPLPWG*STGTSS
Trigger: AGAAGATGTCCCTGTAGAGCAGCCCCAGGGAAGGGG...GGCAAAGCGTGAAGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR CCA 90 bp CTGCCTCAGCATGGTGTCCCCTCCCCATTTGTCCTAACTGTGACTAAAGGGACACGGAGCGTGCGGTCCTaGAACTCAGGAGCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: LPQHGVPSPFVLTVTKGTRSVRS*NSGAGK
Trigger: CTTTCCTGCTCCTGAGTTCCAGGACCGCACGCTCCG...TGTCCCTTTAGTCACAGTTAGGACAAATGGGGAGGGGACACCATGCTGAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp CCAGGGTGGCCTTACTGCATGGCGAGACCCACCTCTCACTGGCTTTGCTGCAGCGTTGTTCCTTTGGCTTaGCACTTGAGTGAACATGGG +
Preference number: 4 (lower is better)
Translates to: PGWPYCMARPTSHWLCCSVVPLA*HLSEHG
Trigger: CCCATGTTCACTCAAGTGCCAAGCCAAAGGAACAAC...GCTGCAGCAAAGCCAGTGAGAGGTGGGTCTCGCCATGCAGTAAGGCCACCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp GGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTAAATTTCCCCGCTGCATaGGCCTGCATAACAGGCACG +
Preference number: 4 (lower is better)
Translates to: GGCVSPSCGQGRVFPHTLNFPAA*ACITGT
Trigger: CGTGCCTGTTATGCAGGCCCATGCAGCGGGGAAATT...TAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp CTATTCGTTTTGGTGCTCAAAGAAGGGTTTAGGGACCACGAGTCCCAGCAGTTTGTGGGGGCCGGCGGCTaGTCACGCACAGGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: LFVLVLKEGFRDHESQQFVGAGG*SRTGSP
Trigger: AGGAGAACCTGTGCGTGACCAGCCGCCGGCCCCCAC...AAACTGCTGGGACTCGTGGTCCCTAAACCCTTCTTTGAGCACCAAAACGAATAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CCA 90 bp GAGTGTGGAGCTGCTCAGGGTACCCGGTGGGGCCATGATGATGAGAGGGAAGAGGCAGCATTCCATGCTTaGATCCTTGCCGGAATCAGA +
Preference number: 4 (lower is better)
Translates to: ECGAAQGTRWGHDDEREEAAFHA*ILAGIR
Trigger: TCTGATTCCGGCAAGGATCCAAGCATGGAATGCTGC...CTCTTCCCTCTCATCATCATGGCCCCACCGGGTACCCTGAGCAGCTCCACACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR CCA 90 bp GGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTAGCTCTCCATGAAGATTaGCCGCCCTGCAGGAGTACA +
Preference number: 4 (lower is better)
Translates to: GGCVSPSCGQGRVFPHTLALHED*PPCRST
Trigger: TGTACTCCTGCAGGGCGGCCAATCTTCATGGAGAGC...TAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR CCA 90 bp CCATTGTCCCACCCCGGTCCCTGGGCCAGCTCTGGAATGAAGAGGTTGCTACAATCTAGGATCAGCAGCTaGGTGCTCTCAGTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: PLSHPGPWASSGMKRLLQSRISS*VLSVSS
Trigger: AGAGCTGACTGAGAGCACCCAGCTGCTGATCCTAGA...TTGTAGCAACCTCTTCATTCCAGAGCTGGCCCAGGGACCGGGGTGGGACAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CCA 90 bp CGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCATTGGACACAGGGGTaGAGATCCCAGAGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: RGGCVSPSCGQGRVFPHTHWTQG*RSQRLS
Trigger: TGAAAGCCTCTGGGATCTCCACCCCTGTGTCCAATG...GGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380545.9
ENST00000380548.9
CDS-3UTR CCA 90 bp GGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTAGGGTGCACATGTCATTaGACACAGGGGTGGAGATCC +
Preference number: 4 (lower is better)
Translates to: GGCVSPSCGQGRVFPHTLGCTCH*TQGWRS
Trigger: GGATCTCCACCCCTGTGTCCAATGACATGTGCACCC...TAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380545.9
ENST00000380548.9
CDS-3UTR CCA 90 bp GCCTTACTGCATGGCGAGACCCACCTCTCACTGGCTTTGCTGCAGCTGCACAGGATGCCATCCCGTGTCTaGCAGAAGACTTGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: ALLHGETHLSLALLQLHRMPSRV*QKTCLC
Trigger: ACACAGACAAGTCTTCTGCCAGACACGGGATGGCAT...CCTGTGCAGCTGCAGCAAAGCCAGTGAGAGGTGGGTCTCGCCATGCAGTAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CCA 90 bp CGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCTCTCGCAGTACCTGGTaGTGTCTCTGCACTCCATGT +
Preference number: 4 (lower is better)
Translates to: RGGCVSPSCGQGRVFPHTSRSTW*CLCTPC
Trigger: ACATGGAGTGCAGAGACACCACCAGGTACTGCGAGA...GGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR CCA 90 bp GGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTACCTTCTCGCAGTACCTaGTGGTGTCTCTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: GGCVSPSCGQGRVFPHTLPSRST*WCLCTP
Trigger: TGGAGTGCAGAGACACCACCAGGTACTGCGAGAAGG...TAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR CCA 90 bp TGGGCCAGCTCTGGAATGAAGAGGTTGCTACAACCTGACAGCCTGACAGATACTCTCACCCTGCCCCACTaGGGAACACCACAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: WASSGMKRLLQPDSLTDTLTLPH*GTPQAP
Trigger: AGGAGCCTGTGGTGTTCCCCAGTGGGGCAGGGTGAG...AGTATCTGTCAGGCTGTCAGGTTGTAGCAACCTCTTCATTCCAGAGCTGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CCA 90 bp TGCCTGGCCTGCTCTGCAACCTCCTTTAGACATCTGTCCTTTCCTTTCCCAACACTCACCCTGCCCCACTaGGGAACACCACAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: CLACSATSFRHLSFPFPTLTLPH*GTPQAP
Trigger: AGGAGCCTGTGGTGTTCCCCAGTGGGGCAGGGTGAG...TGTTGGGAAAGGAAAGGACAGATGTCTAAAGGAGGTTGCAGAGCAGGCCAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CCA 90 bp GGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTGGTGGCCTTACTGCATaGCGAGACCCACCTCTCACT +
Preference number: 4 (lower is better)
Translates to: GCVSPSCGQGRVFPHTLSGGLTA*RDPPLT
Trigger: AGTGAGAGGTGGGTCTCGCCATGCAGTAAGGCCACC...AGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CCA 90 bp GGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTGGGGAGGCTTATCTGTaGGTAAGGGACTCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: GCVSPSCGQGRVFPHTLSGEAYL*VRDSGH
Trigger: GTGGCCAGAGTCCCTTACCCACAGATAAGCCTCCCC...AGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CCA 90 bp CTGCCTCAGCATGGTGTCCCCTCCCCATTTGTCCTAACTGTGACTAAAGGGACAGTAGCCCGGGGTGAGTaGCATTTCATGAGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: LPQHGVPSPFVLTVTKGTVARGE*HFMRGG
Trigger: GCCTCCCCTCATGAAATGCCACTCACCCCGGGCTAC...TGTCCCTTTAGTCACAGTTAGGACAAATGGGGAGGGGACACCATGCTGAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CCA 90 bp GAGTGTGGAGCTGCTCAGGGTACCCGGTGGGGCCATGATGATGAGAGGGAAGAGTGGTCATGCTGGATTTaGGGCATTCCTACTCCAGGA +
Preference number: 4 (lower is better)
Translates to: ECGAAQGTRWGHDDEREEWSCWI*GIPTPG
Trigger: TCCTGGAGTAGGAATGCCCCAAATCCAGCATGACCA...CTCTTCCCTCTCATCATCATGGCCCCACCGGGTACCCTGAGCAGCTCCACACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR TCA 90 bp CAGATGCCCAATGTAGATTGCACCTCTAATGGTTCCCCATGTCTGGTAGCATGTACCCCCGCAGGTGCGTaGGCATTCACTCCATGGGCC +
Preference number: 4 (lower is better)
Translates to: QMPNVDCTSNGSPCLVACTPAGA*AFTPWA
Trigger: GGCCCATGGAGTGAATGCTCACGCACCTGCGGGGGT...ACATGCTACCAGACATGGGGAACCATTAGAGGTGCAATCTACATTGGGCATCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR TCA 90 bp CTCAGAAGGACAGGCTTCCTCTTTGGGACTGCAGCTGGTAACCTGACTTGTCCCGGCTTGGCACTTGAGTaGACATGGGTTGTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: LRRTGFLFGTAAGNLTCPGLALE*TWVVRV
Trigger: GACCCTGACAACCCATGTTCACTCAAGTGCCAAGCC...GGGACAAGTCAGGTTACCAGCTGCAGTCCCAAAGAGGAAGCCTGTCCTTCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380570.8
CDS-3UTR TCA 90 bp CGAGCATTCTGCTTCCCACCCAAACCTAGGTTCTGCCAGCTCACTGAGACCCACACTCTTCCACTGAAGTaGCATGCCCCTGGATGTCCT +
Preference number: 4 (lower is better)
Translates to: RAFCFPPKPRFCQLTETHTLPLK*HAPGCP
Trigger: AGGACATCCAGGGGCATGTCACTTCAGTGGAAGAGT...GTGGGTCTCAGTGAGCTGGCAGAACCTAGGTTTGGGTGGGAAGCAGAATGCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR TCA 90 bp CCATTGTCCCACCCCGGTCCCTGGGCCAGCTCTGGAATGAAGAGGTTGCTACAATTTCCACTCTTCCACTaGAGTGACATGCCCCTGGAT +
Preference number: 4 (lower is better)
Translates to: PLSHPGPWASSGMKRLLQFPLFH*SDMPLD
Trigger: ATCCAGGGGCATGTCACTTCAGTGGAAGAGTGGAAA...TTGTAGCAACCTCTTCATTCCAGAGCTGGCCCAGGGACCGGGGTGGGACAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR TCA 90 bp TGGGCCATTCATGCTCAAAATGGCCCTGGCCCACAGCAGCAGTTAGTTAGTGCGCTGTCTCGTCTGGGTTaGACTCAGGAATTTCCCCGC +
Preference number: 4 (lower is better)
Translates to: WAIHAQNGPGPQQQLVSALSRLG*TQEFPR
Trigger: GCGGGGAAATTCCTGAGTTCAACCCAGACGAGACAG...CGCACTAACTAACTGCTGCTGTGGGCCAGGGCCATTTTGAGCATGAATGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR TCA 90 bp GAGTGGCATTTCATGAGGGGAGGCTTATCTGTGGGTAAGGGACTCTGGCCACCCCAGGCTTCTCCGTGTTaGTCACTGTCATTCGTGACG +
Preference number: 4 (lower is better)
Translates to: EWHFMRGGLSVGKGLWPPQASPC*SLSFVT
Trigger: CGTCACGAATGACAGTGATCAACACGGAGAAGCCTG...GGGTGGCCAGAGTCCCTTACCCACAGATAAGCCTCCCCTCATGAAATGCCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR TCA 90 bp TGGGCCATTCATGCTCAAAATGGCCCTGGCCCACAGCAGCAGTTAGTTAGTGCGAGGAGGACACGTTTGTaGGCAGCAAGGAGCCTTCGT +
Preference number: 4 (lower is better)
Translates to: WAIHAQNGPGPQQQLVSARRTRL*AARSLR
Trigger: ACGAAGGCTCCTTGCTGCTCACAAACGTGTCCTCCT...CGCACTAACTAACTGCTGCTGTGGGCCAGGGCCATTTTGAGCATGAATGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR TCA 90 bp TGCTGCCTCCACCACCCCGCCTTGCTAGATAAATACTACATGCCGGAGGACCTGCAGCTGAATTCCCCTTaGGACCCACCGCTAAGGTTT +
Preference number: 4 (lower is better)
Translates to: CCLHHPALLDKYYMPEDLQLNSP*DPPLRF
Trigger: AAACCTTAGCGGTGGGTCTCAAGGGGAATTCAGCTG...CAGGTCCTCCGGCATGTAGTATTTATCTAGCAAGGCGGGGTGGTGGAGGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR TCA 90 bp GGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTTCTGAGCAAGGCAGCTaGATTCCCCTTGAGACCCAC +
Preference number: 4 (lower is better)
Translates to: GCVSPSCGQGRVFPHTLSSEQGS*IPLETH
Trigger: GTGGGTCTCAAGGGGAATTCAGCTGCCTTGCTCAGA...AGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR TCA 90 bp GGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTAAAGATGCCTTCTGCATaGGCACCCCTGCCTCATTCT +
Preference number: 4 (lower is better)
Translates to: GGCVSPSCGQGRVFPHTLKMPSA*APLPHS
Trigger: AGAATGAGGCAGGGGTGCTCATGCAGAAGGCATCTT...TAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR TCA 90 bp GGCAGAGTTTCAGCTGTTTCACCTTCTCGCAGTACCTGGTGGTGTCTCTGCACTACAGGGTCCACAGGCTaGCTCTCCAGTGTACACTGC +
Preference number: 4 (lower is better)
Translates to: GRVSAVSPSRSTWWCLCTTGSTG*LSSVHC
Trigger: GCAGTGTACACTGGAGAGTCAGCCTGTGGACCCTGT...AGTGCAGAGACACCACCAGGTACTGCGAGAAGGTGAAACAGCTGAAACTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR TCA 90 bp ATGAAGAGGTTGCTACAACCTGACAGCCTGACAGATACTCTCTGGCACAGTGACTCCGAGGTGGTTGCGTaGGTCCTTCGTGTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: MKRLLQPDSLTDTLWHSDSEVVA*VLRVAR
Trigger: CCTGGCCACACGAAGGACTCACGCAACCACCTCGGA...GTCACTGTGCCAGAGAGTATCTGTCAGGCTGTCAGGTTGTAGCAACCTCTTCAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR TCA 90 bp CGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCTGTCCTCCAGCTAACTaGAAGAGAAAACACGCGGAC +
Preference number: 4 (lower is better)
Translates to: RGGCVSPSCGQGRVFPHTCPPAN*KRKHAD
Trigger: GTCCGCGTGTTTTCTCTTTCAGTTAGCTGGAGGACA...GGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR TCA 90 bp ATGAAGAGGTTGCTACAACCTGACAGCCTGACAGATACTCTCTGGCACAGTGACTGGGCAGCAGGGCTCTaGGCATGCGCACATGCATGG +
Preference number: 4 (lower is better)
Translates to: MKRLLQPDSLTDTLWHSDWAAGL*ACAHAW
Trigger: CCATGCATGTGCGCATGCTCAGAGCCCTGCTGCCCA...GTCACTGTGCCAGAGAGTATCTGTCAGGCTGTCAGGTTGTAGCAACCTCTTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR TCA 90 bp CGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCTACAACCTGACAGCCTaGCAGATACTCTCTGGCACA +
Preference number: 4 (lower is better)
Translates to: RGGCVSPSCGQGRVFPHTYNLTA*QILSGT
Trigger: TGTGCCAGAGAGTATCTGTCAGGCTGTCAGGTTGTA...GGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp TGGGCCAGCTCTGGAATGAAGAGGTTGCTACAACCTGACAGCCTGACAGATACTGAAAGAGGAGCAGTGTaGCAGGAGTTGCCCGACGGC +
Preference number: 4 (lower is better)
Translates to: WASSGMKRLLQPDSLTDTERGAV*QELPDG
Trigger: GCCGTCGGGCAACTCCTGGCACACTGCTCCTCTTTC...AGTATCTGTCAGGCTGTCAGGTTGTAGCAACCTCTTCATTCCAGAGCTGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp AGGTTCATTATCGTTTTGGTGGAGGTGTTGTTCCCTGGCTGTTTAGTGGGGCCAGTCCTCCTCGGAGCGTaGGGTCCTGGAACTCAGGAG +
Preference number: 4 (lower is better)
Translates to: RFIIVLVEVLFPGCLVGPVLLGA*GPGTQE
Trigger: CTCCTGAGTTCCAGGACCGCACGCTCCGAGGAGGAC...TGGCCCCACTAAACAGCCAGGGAACAACACCTCCACCAAAACGATAATGAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380570.8
CDS-3UTR GCA 90 bp GTTCATTATCGTTTTGGTGGAGGTGTTGTTCCCTGGCTGTTTAGTGGGGCCAGACCCCACCCCCGCAGGTaGGTGAGCATTCACTCCATG +
Preference number: 4 (lower is better)
Translates to: VHYRFGGGVVPWLFSGARPHPRR*VSIHSM
Trigger: CATGGAGTGAATGCTCACGCACCTGCGGGGGTGGGG...TCTGGCCCCACTAAACAGCCAGGGAACAACACCTCCACCAAAACGATAATGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000380570.8
CDS-3UTR GCA 90 bp TGTCTTCCTCTCAAATTTTACTTCCAGGCTGGCTGGAAATGCAGCCCTGATGTCCTGGCGGCCGCGATGTaGGGGCTGTGCTTCGTGGAT +
Preference number: 4 (lower is better)
Translates to: CLPLKFYFQAGWKCSPDVLAAAM*GLCFVD
Trigger: ATCCACGAAGCACAGCCCGCACATCGCGGCCGCCAG...GACATCAGGGCTGCATTTCCAGCCAGCCTGGAAGTAAAATTTGAGAGGAAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp TGGCAGAGTTTCAGCTGTTTCACCTTCTCGCAGTACCTGGTGGTGTCTCTGCACGAAGATTGGCCGCCCTaGAGGAGTACAGGCCCTGAT +
Preference number: 4 (lower is better)
Translates to: WQSFSCFTFSQYLVVSLHEDWPP*RSTGPD
Trigger: ATCAGGGCCTGTACTCCTGCAGGGCGGCCAATCTTC...GTGCAGAGACACCACCAGGTACTGCGAGAAGGTGAAACAGCTGAAACTCTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR GCA 90 bp CCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTTCACGCTTTGCCGGATCAGCAGCTGGGTaGTCTCAGTCAGCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: PSCGQGRVFPHTLSSRFAGSAAG*SQSALH
Trigger: ATGGAGAGCTGACTGAGAGCACCCAGCTGCTGATCC...GGCAAAGCGTGAAGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR GCA 90 bp GGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTCTGCATGAGCACCCCTaGCTCATTCTGAGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: GCVSPSCGQGRVFPHTLSLHEHP*LILSKA
Trigger: TGCCTTGCTCAGAATGAGGCAGGGGTGCTCATGCAG...AGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR GCA 90 bp CCCTATCTTCACGCTTTGCCACAAGTTCCACAGCAGCGAGATTTAAACTGGCTGTTGCACGCGATGGGCTaGACCGCAGGGCGAACCTTC +
Preference number: 4 (lower is better)
Translates to: PYLHALPQVPQQRDLNWLLHAMG*TAGRTF
Trigger: GAAGGTTCGCCCTGCGGTGCAGCCCATCGCGTGCAA...CAGCCAGTTTAAATCTCGCTGCTGTGGAACTTGTGGCAAAGCGTGAAGATAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542621.5
CDS-3UTR GCA 90 bp CGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCGGAAGAGCACTGCACTaGTCTGATGGTAAGGTGATG +
Preference number: 4 (lower is better)
Translates to: RGGCVSPSCGQGRVFPHTGRALH*SDGKVM
Trigger: CATCACCTTACCATCAGAGCAGTGCAGTGCTCTTCC...GGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR GCA 90 bp GGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTCTCTCCAGTGTACACTaGAGGCCTCTGACCAGCAGT +
Preference number: 4 (lower is better)
Translates to: GCVSPSCGQGRVFPHTLSLSSVH*RPLTSS
Trigger: ACTGCTGGTCAGAGGCCTGCAGTGTACACTGGAGAG...AGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR GCA 90 bp ACTGAAAGAGAAAACACGCGGACGTCCTTATGCTTGAAGGTGGAGGTGGAGGAGTTGTTGGTGCGGGCATaGACACACTCCACACGCCGG +
Preference number: 4 (lower is better)
Translates to: TERENTRTSLCLKVEVEELLVRA*THSTRR
Trigger: CCGGCGTGTGGAGTGTGTGCATGCCCGCACCAACAA...CTCCTCCACCTCCACCTTCAAGCATAAGGACGTCCGCGTGTTTTCTCTTTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp CAGCAGCGAGATTTAAACTGGCTGAGTTGGCAGAGTTTCAGCTGTTTCACCTTCGTGATGTTGCAGCGCTaGCAGTTGGCAGGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: QQRDLNWLSWQSFSCFTFVMLQR*QLAGRG
Trigger: GCCCCGGCCTGCCAACTGGCAGCGCTGCAACATCAC...GAAGGTGAAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAATCTCGCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR GCA 90 bp AGCTTAGGTTCTGTCCGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGATTCTGGGCTAGTTTCTaGCTCAGCATGGTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: SLGSVRGGCVSPSCGQGRFWASF*LSMVSP
Trigger: AGGGGACACCATGCTGAGGCAGAAACTAGCCCAGAA...TCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCGGACAGAACCTAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp TTAAACTGGCTGAGTTGGCAGAGTTTCAGCTGTTTCACCTTCTCGCAGTACCTGAGCCCCTGCTCACCCTaGCCCACTGGGGAACACCAC +
Preference number: 4 (lower is better)
Translates to: LNWLSWQSFSCFTFSQYLSPCSP*PTGEHH
Trigger: GTGGTGTTCCCCAGTGGGGCAGGGTGAGCAGGGGCT...CAGGTACTGCGAGAAGGTGAAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542621.5
CDS-3UTR GCA 90 bp GGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTAACCTGGGCCATTCATaGTCAAAATGGCCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: GCVSPSCGQGRVFPHTLSNLGHS*SKWPWP
Trigger: GGGCCAGGGCCATTTTGAGCATGAATGGCCCAGGTT...AGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp GCTGTTTCACCTTCTCGCAGTACCTGGTGGTGTCTCTGCACTCCATGTTTTCACGTGTGTGAGCTGCTTTaGCAGGGTGCTGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: AVSPSRSTWWCLCTPCFHVCELL*QGAAST
Trigger: GGTGGAGGCAGCACCCTGGCAAAGCAGCTCACACAC...GTGAAAACATGGAGTGCAGAGACACCACCAGGTACTGCGAGAAGGTGAAACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542621.5
CDS-3UTR CCA 90 bp GAGTGTGGAGCTGCTCAGGGTACCCGGTGGGGCCATGATGATGAGAGGGAAGAGTCACCTTTAGTCCCCTaGAGGGTTTTGGTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: ECGAAQGTRWGHDDEREESPLVP*RVLVSR
Trigger: TCTGGAAACCAAAACCCTCCAGGGGACTAAAGGTGA...CTCTTCCCTCTCATCATCATGGCCCCACCGGGTACCCTGAGCAGCTCCACACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR CCA 90 bp GAGTGGCATTTCATGAGGGGAGGCTTATCTGTGGGTAAGGGACTCTGGCCACCCGTGTGCATTCCTCGATaGTCGATGCAGAGGACCACA +
Preference number: 4 (lower is better)
Translates to: EWHFMRGGLSVGKGLWPPVCIPR*SMQRTT
Trigger: TGTGGTCCTCTGCATCGACCATCGAGGAATGCACAC...GGGTGGCCAGAGTCCCTTACCCACAGATAAGCCTCCCCTCATGAAATGCCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp GGAATTTGTCCAATGTTTGCACCAATAGGCTACAAACCTTCTGGCTCCCTGCTGGGCCGACCAGGCCTCTaGGATGAACGAGGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: GICPMFAPIGYKPSGSLLGRPGL*DERGLL
Trigger: GAGGAGCCCTCGTTCATCCCAGAGGCCTGGTCGGCC...CAGCAGGGAGCCAGAAGGTTTGTAGCCTATTGGTGCAAACATTGGACAAATTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp CCTCCTTCCACATTAGCCAGCAGCCTTCATTGTCTTGTGGTGCTGCTGAGTTGCCTGACTATTCGCACCTaGGTCCCCACACCACAGGTG +
Preference number: 4 (lower is better)
Translates to: PPSTLASSLHCLVVLLSCLTIRT*VPTPQV
Trigger: CACCTGTGGTGTGGGGACCCAGGTGCGAATAGTCAG...GCAACTCAGCAGCACCACAAGACAATGAAGGCTGCTGGCTAATGTGGAAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp TGGGCCAGCTCTGGAATGAAGAGGTTGCTACAACCTGACAGCCTGACAGATACTCTCACCACAGCCTCCTaGACACCTCCTCCACAGGAC +
Preference number: 4 (lower is better)
Translates to: WASSGMKRLLQPDSLTDTLTTAS*TPPPQD
Trigger: GTCCTGTGGAGGAGGTGTCCAGGAGGCTGTGGTGAG...AGTATCTGTCAGGCTGTCAGGTTGTAGCAACCTCTTCATTCCAGAGCTGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp CGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCGCAGCATTCCATGCTTaGATCCTTGCCGGAATCAGA +
Preference number: 4 (lower is better)
Translates to: RGGCVSPSCGQGRVFPHTAAFHA*ILAGIR
Trigger: TCTGATTCCGGCAAGGATCCAAGCATGGAATGCTGC...GGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp GCCTTACTGCATGGCGAGACCCACCTCTCACTGGCTTTGCTGCAGCTGCACAGGTTCTTGCATGCTTGCTaGCAGGCAGGTTTTGAAGCT +
Preference number: 4 (lower is better)
Translates to: ALLHGETHLSLALLQLHRFLHAC*QAGFEA
Trigger: AGCTTCAAAACCTGCCTGCCAGCAAGCATGCAAGAA...CCTGTGCAGCTGCAGCAAAGCCAGTGAGAGGTGGGTCTCGCCATGCAGTAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp CGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCAGAGAAGCCACTCGCTaGGACAGTCATCTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: RGGCVSPSCGQGRVFPHTREATR*DSHLSC
Trigger: GCAAGAAAGATGACTGTCCCAGCGAGTGGCTTCTCT...GGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp TGGGCCATTCATGCTCAAAATGGCCCTGGCCCACAGCAGCAGTTAGTTAGTGCGCTTCCCCGCAGCTTGTaGAACACTCTGTCCAGTCTG +
Preference number: 4 (lower is better)
Translates to: WAIHAQNGPGPQQQLVSALPRSL*NTLSSL
Trigger: CAGACTGGACAGAGTGTTCCACAAGCTGCGGGGAAG...CGCACTAACTAACTGCTGCTGTGGGCCAGGGCCATTTTGAGCATGAATGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp GTTTGTGATAGTGCGCTTCTAGGAAAGACACAGGAATTTGTCCAATGTTTGCACAGCGGCTCCCCGGGTTaGCGGCCAGGCCCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: VCDSALLGKTQEFVQCLHSGSPG*RPGPAS
Trigger: AGAAGCGGGGCCTGGCCGCCAACCCGGGGAGCCGCT...GTGCAAACATTGGACAAATTCCTGTGTCTTTCCTAGAAGCGCACTATCACAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp ATGAAGAGGTTGCTACAACCTGACAGCCTGACAGATACTCTCTGGCACAGTGACAGCTCCTCGGGCTGCTaGGAGAGGTTCCCCAGGATG +
Preference number: 4 (lower is better)
Translates to: MKRLLQPDSLTDTLWHSDSSSGC*ERFPRM
Trigger: CATCCTGGGGAACCTCTCCCAGCAGCCCGAGGAGCT...GTCACTGTGCCAGAGAGTATCTGTCAGGCTGTCAGGTTGTAGCAACCTCTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp TGGGCCAGCTCTGGAATGAAGAGGTTGCTACAACCTGACAGCCTGACAGATACTAGATCTTGCGCAGGATaGTGGGCTTGCGGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: WASSGMKRLLQPDSLTDTRSCAG*WACGVA
Trigger: GGCCACACCGCAAGCCCACCATCCTGCGCAAGATCT...AGTATCTGTCAGGCTGTCAGGTTGTAGCAACCTCTTCATTCCAGAGCTGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp GTTCCACAGCAGCGAGATTTAAACTGGCTGAGTTGGCAGAGTTTCAGCTGTTTCTCCGGTTGCACGCGATaGGCTGCACCGCAGGGCGAA +
Preference number: 4 (lower is better)
Translates to: VPQQRDLNWLSWQSFSCFSGCTR*AAPQGE
Trigger: TTCGCCCTGCGGTGCAGCCCATCGCGTGCAACCGGA...GAAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAATCTCGCTGCTGTGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542621.5
CDS-3UTR CCA 90 bp GTTGGCAGAGTTTCAGCTGTTTCACCTTCTCGCAGTACCTGGTGGTGTCTCTGCCAGGCACTGCCTTGTTaGTGCGGGCATGCACACACT +
Preference number: 4 (lower is better)
Translates to: VGRVSAVSPSRSTWWCLCQALPC*CGHAHT
Trigger: AGTGTGTGCATGCCCGCACCAACAAGGCAGTGCCTG...GCAGAGACACCACCAGGTACTGCGAGAAGGTGAAACAGCTGAAACTCTGCCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR CCA 90 bp TGGGCCATTCATGCTCAAAATGGCCCTGGCCCACAGCAGCAGTTAGTTAGTGCGAGGTTCTGTCCGAGGTaGTTGCGTGAGTCCTTCGTG +
Preference number: 4 (lower is better)
Translates to: WAIHAQNGPGPQQQLVSARFCPR*LRESFV
Trigger: CACGAAGGACTCACGCAACCACCTCGGACAGAACCT...CGCACTAACTAACTGCTGCTGTGGGCCAGGGCCATTTTGAGCATGAATGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CCA 90 bp CCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTTCACGCTTTGCCAAAGAGGTGCCAGGGTaGCCTTACTGCATGGCGAGA +
Preference number: 4 (lower is better)
Translates to: PSCGQGRVFPHTLSSRFAKEVPG*PYCMAR
Trigger: TCTCGCCATGCAGTAAGGCCACCCTGGCACCTCTTT...GGCAAAGCGTGAAGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542621.5
CDS-3UTR CCA 90 bp ACTGAAAGAGAAAACACGCGGACGTCCTTATGCTTGAAGGTGGAGGTGGAGGAGGTAGCCCGGGGTGAGTaGCATTTCATGAGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: TERENTRTSLCLKVEVEEVARGE*HFMRGG
Trigger: GCCTCCCCTCATGAAATGCCACTCACCCCGGGCTAC...CTCCTCCACCTCCACCTTCAAGCATAAGGACGTCCGCGTGTTTTCTCTTTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR TCA 90 bp AGCTTAGGTTCTGTCCGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGACTTTGGCTTGGCACTTaGGTGAACATGGGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: SLGSVRGGCVSPSCGQGRLWLGT*VNMGCQ
Trigger: CTGACAACCCATGTTCACTCAAGTGCCAAGCCAAAG...TCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCGGACAGAACCTAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR TCA 90 bp TGCCTCAGAAGGACAGGCTTCCTCTTTGGGACTGCAGCTGGTAACCTGACTTGTGTGCTTCCCAGCTGGTaGTCGCAGCCAACAATTTGG +
Preference number: 4 (lower is better)
Translates to: CLRRTGFLFGTAAGNLTCVLPSW*SQPTIW
Trigger: CCAAATTGTTGGCTGCGATCACCAGCTGGGAAGCAC...ACAAGTCAGGTTACCAGCTGCAGTCCCAAAGAGGAAGCCTGTCCTTCTGAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380570.8
CDS-3UTR TCA 90 bp ACAAACATTAAATGTACATTCATTTCATGCAACGAGCATTCTGCTTCCCACCCACCGGGCCGGGCCCGCTaGGCAGGTGTAGACGCCTGC +
Preference number: 4 (lower is better)
Translates to: TNIKCTFISCNEHSASHPPGRAR*AGVDAC
Trigger: GCAGGCGTCTACACCTGCTCAGCGGGCCCGGCCCGG...TGGGTGGGAAGCAGAATGCTCGTTGCATGAAATGAATGTACATTTAATGTTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR TCA 90 bp TGGGGAAGAGGAGACAAAGGAGCAAAACACTCCTGTGTTTGTGATAGTGCGCTTGAGCTGCTGGGCCGCTaGGATCTTGCGCAGGATGGT +
Preference number: 4 (lower is better)
Translates to: WGRGDKGAKHSCVCDSALELLGR*DLAQDG
Trigger: ACCATCCTGCGCAAGATCTCAGCGGCCCAGCAGCTC...AAGCGCACTATCACAAACACAGGAGTGTTTTGCTCCTTTGTCTCCTCTTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR TCA 90 bp ACTGAAAGAGAAAACACGCGGACGTCCTTATGCTTGAAGGTGGAGGTGGAGGAGCCAGCTGCCAAGATGTaGTGCGTCAGTCCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: TERENTRTSLCLKVEVEEPAAKM*CVSPVA
Trigger: TGCCACAGGACTGACGCATCACATCTTGGCAGCTGG...CTCCTCCACCTCCACCTTCAAGCATAAGGACGTCCGCGTGTTTTCTCTTTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR TCA 90 bp CCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTTCACGCTTTGCCCAGCTGAATTCCCCTTaGGACCCACCGCTAAGGTTT +
Preference number: 4 (lower is better)
Translates to: PSCGQGRVFPHTLSSRFAQLNSP*DPPLRF
Trigger: AAACCTTAGCGGTGGGTCTCAAGGGGAATTCAGCTG...GGCAAAGCGTGAAGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR TCA 90 bp CTGCCTCAGCATGGTGTCCCCTCCCCATTTGTCCTAACTGTGACTAAAGGGACATCTGAGCAAGGCAGCTaGATTCCCCTTGAGACCCAC +
Preference number: 4 (lower is better)
Translates to: LPQHGVPSPFVLTVTKGTSEQGS*IPLETH
Trigger: GTGGGTCTCAAGGGGAATTCAGCTGCCTTGCTCAGA...TGTCCCTTTAGTCACAGTTAGGACAAATGGGGAGGGGACACCATGCTGAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR TCA 90 bp GAGTGGCATTTCATGAGGGGAGGCTTATCTGTGGGTAAGGGACTCTGGCCACCCTCCCTACTGGTGATCTaGGTTCTTCTCTCTCTGCAC +
Preference number: 4 (lower is better)
Translates to: EWHFMRGGLSVGKGLWPPSLLVI*VLLSLH
Trigger: GTGCAGAGAGAGAAGAACTCAGATCACCAGTAGGGA...GGGTGGCCAGAGTCCCTTACCCACAGATAAGCCTCCCCTCATGAAATGCCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR TCA 90 bp GGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTGCATTTATAGCTTCTTaGATCCCCCTTCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GCVSPSCGQGRVFPHTLSAFIAS*IPLPWG
Trigger: GCCCCAGGGAAGGGGGATTCAAGAAGCTATAAATGC...AGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000380545.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR TCA 90 bp CCCCATGTCTGGTTCACTCCTGATGTGCCTCAGAAGGACAGGCTTCCTCTTTGGCTGCAGCTGGTAACCTaGCTTGTCCCACCTAAGCTA +
Preference number: 4 (lower is better)
Translates to: PHVWFTPDVPQKDRLPLWLQLVT*LVPPKL
Trigger: TAGCTTAGGTGGGACAAGTCAGGTTACCAGCTGCAG...CCAAAGAGGAAGCCTGTCCTTCTGAGGCACATCAGGAGTGAACCAGACATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380570.8
CDS-3UTR GCA 90 bp CAGATGCCCAATGTAGATTGCACCTCTAATGGTTCCCCATGTCTGGTAGCATGTGTCCTCCTCGGAGCGTaGGGTCCTGGAACTCAGGAG +
Preference number: 4 (lower is better)
Translates to: QMPNVDCTSNGSPCLVACVLLGA*GPGTQE
Trigger: CTCCTGAGTTCCAGGACCGCACGCTCCGAGGAGGAC...ACATGCTACCAGACATGGGGAACCATTAGAGGTGCAATCTACATTGGGCATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR GCA 90 bp CGAGCATTCTGCTTCCCACCCAAACCTAGGTTCTGCCAGCTCACTGAGACCCACTGGACCCATCTCCGTTaGAGACCCCACAGTTATCTT +
Preference number: 4 (lower is better)
Translates to: RAFCFPPKPRFCQLTETHWTHLR*RPHSYL
Trigger: AAGATAACTGTGGGGTCTGCAACGGAGATGGGTCCA...GTGGGTCTCAGTGAGCTGGCAGAACCTAGGTTTGGGTGGGAAGCAGAATGCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp GCTCAGGGTACCCGGTGGGGCCATGATGATGAGAGGGAAGAGTGGACTTACTCTTGGACCCATCTCCGTTaGAGACCCCACAGTTATCTT +
Preference number: 4 (lower is better)
Translates to: AQGTRWGHDDEREEWTYSWTHLR*RPHSYL
Trigger: AAGATAACTGTGGGGTCTGCAACGGAGATGGGTCCA...AGAGTAAGTCCACTCTTCCCTCTCATCATCATGGCCCCACCGGGTACCCTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR GCA 90 bp GAGTGTGGAGCTGCTCAGGGTACCCGGTGGGGCCATGATGATGAGAGGGAAGAGCTTGACAATGAAATCTaGTGTGAGTGGTCCAGCCAT +
Preference number: 4 (lower is better)
Translates to: ECGAAQGTRWGHDDEREELDNEI*CEWSSH
Trigger: ATGGCTGGACCACTCACAGCAGATTTCATTGTCAAG...CTCTTCCCTCTCATCATCATGGCCCCACCGGGTACCCTGAGCAGCTCCACACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR GCA 90 bp GGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTACCATGCTTGGATCCTTaGCGGAATCAGAATCGGACA +
Preference number: 4 (lower is better)
Translates to: GGCVSPSCGQGRVFPHTLPCLDP*RNQNRT
Trigger: TGTCCGATTCTGATTCCGGCAAGGATCCAAGCATGG...TAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp TGTCTTCCTCTCAAATTTTACTTCCAGGCTGGCTGGAAATGCAGCCCTGATGTCTGGTGTTTGTGGGTCTaGAGGGCCTCCTTCGGGCCG +
Preference number: 4 (lower is better)
Translates to: CLPLKFYFQAGWKCSPDVWCLWV*RASFGP
Trigger: CGGCCCGAAGGAGGCCCTGCAGACCCACAAACACCA...GACATCAGGGCTGCATTTCCAGCCAGCCTGGAAGTAAAATTTGAGAGGAAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp GGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTAAAGGATCTGTCCAGCTaGCAAGATGTGATGCGTCAG +
Preference number: 4 (lower is better)
Translates to: GGCVSPSCGQGRVFPHTLKDLSS*QDVMRQ
Trigger: CTGACGCATCACATCTTGGCAGCTGGACAGATCCTT...TAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR GCA 90 bp GGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTACCCACCGCTAAGGTTTaGAACTTGAAGGATCTGTCC +
Preference number: 4 (lower is better)
Translates to: GGCVSPSCGQGRVFPHTLPTAKV*NLKDLS
Trigger: GGACAGATCCTTCAAGTTGCAAACCTTAGCGGTGGG...TAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR GCA 90 bp TGTCTTCCTCTCAAATTTTACTTCCAGGCTGGCTGGAAATGCAGCCCTGATGTCTTGCACGCGATGGGCTaGACCGCAGGGCGAACCTTC +
Preference number: 4 (lower is better)
Translates to: CLPLKFYFQAGWKCSPDVLHAMG*TAGRTF
Trigger: GAAGGTTCGCCCTGCGGTGCAGCCCATCGCGTGCAA...GACATCAGGGCTGCATTTCCAGCCAGCCTGGAAGTAAAATTTGAGAGGAAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp AGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTTCACGCTTTACCAGCAGTTCTGGGTaGTCACAGGCCTCGGAAGAG +
Preference number: 4 (lower is better)
Translates to: SPSCGQGRVFPHTLSSRFTSSSG*SQASEE
Trigger: CTCTTCCGAGGCCTGTGAGCACCCAGAACTGCTGGT...AAAGCGTGAAGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR GCA 90 bp TGCCTGGCCTGCTCTGCAACCTCCTTTAGACATCTGTCCTTTCCTTTCCCAACAACCAGCAGTTCTGGGTaGTCACAGGCCTCGGAAGAG +
Preference number: 4 (lower is better)
Translates to: CLACSATSFRHLSFPFPTTSSSG*SQASEE
Trigger: CTCTTCCGAGGCCTGTGAGCACCCAGAACTGCTGGT...TGTTGGGAAAGGAAAGGACAGATGTCTAAAGGAGGTTGCAGAGCAGGCCAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp CTGCCTCAGCATGGTGTCCCCTCCCCATTTGTCCTAACTGTGACTAAAGGGACAACGCGGACGTCCTTATaGTTGAAGGTGGAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: LPQHGVPSPFVLTVTKGTTRTSL*LKVEVE
Trigger: CTCCACCTCCACCTTCAAGCATAAGGACGTCCGCGT...TGTCCCTTTAGTCACAGTTAGGACAAATGGGGAGGGGACACCATGCTGAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp GTTGGCAGAGTTTCAGCTGTTTCACCTTCTCGCAGTACCTGGTGGTGTCTCTGCACGCGGACGTCCTTATaGTTGAAGGTGGAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: VGRVSAVSPSRSTWWCLCTRTSL*LKVEVE
Trigger: CTCCACCTCCACCTTCAAGCATAAGGACGTCCGCGT...GCAGAGACACCACCAGGTACTGCGAGAAGGTGAAACAGCTGAAACTCTGCCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542621.5
CDS-3UTR GCA 90 bp GGAGAGGGAGGGTGTACTGTGGACACGCATAAACCCATTGTCCCACCCCGGTCCGAGTTCTTCTCTCTCTaGACTCACCCACTAGAAGAA +
Preference number: 4 (lower is better)
Translates to: GEGGCTVDTHKPIVPPRSEFFSL*THPLEE
Trigger: TTCTTCTAGTGGGTGAGTGCAGAGAGAGAAGAACTC...GGACCGGGGTGGGACAATGGGTTTATGCGTGTCCACAGTACACCCTCCCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp CCCATTGTCCCACCCCGGTCCCTGGGCCAGCTCTGGAATGAAGAGGTTGCTACAGAGTTCTTCTCTCTCTaGACTCACCCACTAGAAGAA +
Preference number: 4 (lower is better)
Translates to: PIVPPRSLGQLWNEEVATEFFSL*THPLEE
Trigger: TTCTTCTAGTGGGTGAGTGCAGAGAGAGAAGAACTC...TGTAGCAACCTCTTCATTCCAGAGCTGGCCCAGGGACCGGGGTGGGACAATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp ATGAAGAGGTTGCTACAACCTGACAGCCTGACAGATACTCTCTGGCACAGTGACGTGTGTGAGCTGCTTTaGCAGGGTGCTGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: MKRLLQPDSLTDTLWHSDVCELL*QGAAST
Trigger: GGTGGAGGCAGCACCCTGGCAAAGCAGCTCACACAC...GTCACTGTGCCAGAGAGTATCTGTCAGGCTGTCAGGTTGTAGCAACCTCTTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CCA 90 bp AGCTTAGGTTCTGTCCGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAATCACCTGCTTCTGGTaGGCAGTCCACATTACTGCA +
Preference number: 4 (lower is better)
Translates to: SLGSVRGGCVSPSCGQGRITCFW*AVHITA
Trigger: TGCAGTAATGTGGACTGCCCACCAGAAGCAGGTGAT...TCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCGGACAGAACCTAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp GATAGCTTGGGAAGTGGGGACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCTCCCCTGGAGGGTTTTaGTTTCCAGATATAAGTGAT +
Preference number: 4 (lower is better)
Translates to: DSLGSGDSHAAQCSVVGSSPGGF*FPDISD
Trigger: ATCACTTATATCTGGAAACCAAAACCCTCCAGGGGA...GCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTCCCCACTTCCCAAGCTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp GGAGAGGGAGGGTGTACTGTGGACACGCATAAACCCATTGTCCCACCCCGGTCCGAAATCTGCTGTGAGTaGTCCAGCCATTCTCAGTAT +
Preference number: 4 (lower is better)
Translates to: GEGGCTVDTHKPIVPPRSEICCE*SSHSQY
Trigger: ATACTGAGAATGGCTGGACCACTCACAGCAGATTTC...GGACCGGGGTGGGACAATGGGTTTATGCGTGTCCACAGTACACCCTCCCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp CCCATTGTCCCACCCCGGTCCCTGGGCCAGCTCTGGAATGAAGAGGTTGCTACACTGGAAGTTTCTCTTTaGGTTTATAGCAGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: PIVPPRSLGQLWNEEVATLEVSL*VYSREW
Trigger: CCACTCCCTGCTATAAACCCAAAGAGAAACTTCCAG...TGTAGCAACCTCTTCATTCCAGAGCTGGCCCAGGGACCGGGGTGGGACAATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp TGGGGAAGAGGAGACAAAGGAGCAAAACACTCCTGTGTTTGTGATAGTGCGCTTGGCACGCTGGGATGCTaGCTTGGGCCCTTCACACTC +
Preference number: 4 (lower is better)
Translates to: WGRGDKGAKHSCVCDSALGTLGC*LGPFTL
Trigger: GAGTGTGAAGGGCCCAAGCCAGCATCCCAGCGTGCC...AAGCGCACTATCACAAACACAGGAGTGTTTTGCTCCTTTGTCTCCTCTTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp CGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCGTATCCCAAGGCATTaGTGGCATTGCAAGTGTAGA +
Preference number: 4 (lower is better)
Translates to: RGGCVSPSCGQGRVFPHTRIPRH*WHCKCR
Trigger: TCTACACTTGCAATGCCACCAATGCCTTGGGATACG...GGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp GGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTTCTAGGATCAGCAGCTaGGTGCTCTCAGTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: GCVSPSCGQGRVFPHTLSSRISS*VLSVSS
Trigger: AGAGCTGACTGAGAGCACCCAGCTGCTGATCCTAGA...AGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR CCA 90 bp CGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCTGTGGCAGTGACAATTaGCTGACCACCATGAAACCA +
Preference number: 4 (lower is better)
Translates to: RGGCVSPSCGQGRVFPHTCGSDN*LTTMKP
Trigger: TGGTTTCATGGTGGTCAGCCAATTGTCACTGCCACA...GGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR CCA 90 bp GAAAGGAGCGGGCCAGGCTATGTTACAGTTCAGGAAGGGTATAAAAGGACATTATCCGGTTGCACGCGATaGGCTGCACCGCAGGGCGAA +
Preference number: 4 (lower is better)
Translates to: ERSGPGYVTVQEGYKRTLSGCTR*AAPQGE
Trigger: TTCGCCCTGCGGTGCAGCCCATCGCGTGCAACCGGA...TAATGTCCTTTTATACCCTTCCTGAACTGTAACATAGCCTGGCCCGCTCCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380538.4
CDS-3UTR CCA 90 bp TTGTGTTTTAGAGGAGAAAGTGCCTCCTTCCACATTAGCCAGCAGCCTTCATTGGTCACCCTGCGGGTCTaGACACCTCCCCCACAGCTC +
Preference number: 4 (lower is better)
Translates to: LCFRGESASFHISQQPSLVTLRV*TPPPQL
Trigger: GAGCTGTGGGGGAGGTGTCCAGACCCGCAGGGTGAC...CAATGAAGGCTGCTGGCTAATGTGGAAGGAGGCACTTTCTCCTCTAAAACACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp GGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTACTCCATGTTTTCACATaGGGTGATGTTGCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: GGCVSPSCGQGRVFPHTLLHVFT*GDVAAL
Trigger: CAGCGCTGCAACATCACCCCATGTGAAAACATGGAG...TAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR CCA 90 bp GGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTTCTCGCAGTACCTGGTaGTGTCTCTGCACTCCATGT +
Preference number: 4 (lower is better)
Translates to: GCVSPSCGQGRVFPHTLSSRSTW*CLCTPC
Trigger: ACATGGAGTGCAGAGACACCACCAGGTACTGCGAGA...AGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR TCA 90 bp CCCCATGTCTGGTTCACTCCTGATGTGCCTCAGAAGGACAGGCTTCCTCTTTGGCTTTGGCTTGGCACTTaGGTGAACATGGGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: PHVWFTPDVPQKDRLPLWLWLGT*VNMGCQ
Trigger: CTGACAACCCATGTTCACTCAAGTGCCAAGCCAAAG...CCAAAGAGGAAGCCTGTCCTTCTGAGGCACATCAGGAGTGAACCAGACATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380570.8
CDS-3UTR TCA 90 bp CCATTGTCCCACCCCGGTCCCTGGGCCAGCTCTGGAATGAAGAGGTTGCTACAAGCTTGGGTTTGGGTTTaGTGTTCTCTGGGTAATAGT +
Preference number: 4 (lower is better)
Translates to: PLSHPGPWASSGMKRLLQAWVWV*CSLGNS
Trigger: ACTATTACCCAGAGAACATCAAACCCAAACCCAAGC...TTGTAGCAACCTCTTCATTCCAGAGCTGGCCCAGGGACCGGGGTGGGACAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR TCA 90 bp AGCTTAGGTTCTGTCCGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGACCTTCTTCTAGCTCTTaGGCTTGTTTGAACCATGGC +
Preference number: 4 (lower is better)
Translates to: SLGSVRGGCVSPSCGQGRPSSSS*ACLNHG
Trigger: GCCATGGTTCAAACAAGCTCAAGAGCTAGAAGAAGG...TCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCGGACAGAACCTAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR TCA 90 bp GAGTGGCATTTCATGAGGGGAGGCTTATCTGTGGGTAAGGGACTCTGGCCACCCGCTCATCAGCCAGGATaGCTGTTTCATTCATCTCTC +
Preference number: 4 (lower is better)
Translates to: EWHFMRGGLSVGKGLWPPAHQPG*LFHSSL
Trigger: GAGAGATGAATGAAACAGTCATCCTGGCTGATGAGC...GGGTGGCCAGAGTCCCTTACCCACAGATAAGCCTCCCCTCATGAAATGCCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR TCA 90 bp TGCTGCCTCCACCACCCCGCCTTGCTAGATAAATACTACATGCCGGAGGACCTGCTCCCTGCACTGTTTTaGTGGTGCTTCCTATATCGA +
Preference number: 4 (lower is better)
Translates to: CCLHHPALLDKYYMPEDLLPALF*WCFLYR
Trigger: TCGATATAGGAAGCACCATCAAAACAGTGCAGGGAG...CAGGTCCTCCGGCATGTAGTATTTATCTAGCAAGGCGGGGTGGTGGAGGCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR TCA 90 bp TGCCTGGCCTGCTCTGCAACCTCCTTTAGACATCTGTCCTTTCCTTTCCCAACAAGGAGGACACGTTTGTaGGCAGCAAGGAGCCTTCGT +
Preference number: 4 (lower is better)
Translates to: CLACSATSFRHLSFPFPTRRTRL*AARSLR
Trigger: ACGAAGGCTCCTTGCTGCTCACAAACGTGTCCTCCT...TGTTGGGAAAGGAAAGGACAGATGTCTAAAGGAGGTTGCAGAGCAGGCCAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR TCA 90 bp TGCCTGGCCTGCTCTGCAACCTCCTTTAGACATCTGTCCTTTCCTTTCCCAACAACCCCTGCCTCATTCTaGGCAAGGCAGCTGAATTCC +
Preference number: 4 (lower is better)
Translates to: CLACSATSFRHLSFPFPTTPASF*ARQLNS
Trigger: GGAATTCAGCTGCCTTGCTCAGAATGAGGCAGGGGT...TGTTGGGAAAGGAAAGGACAGATGTCTAAAGGAGGTTGCAGAGCAGGCCAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR TCA 90 bp ATGAAGAGGTTGCTACAACCTGACAGCCTGACAGATACTCTCTGGCACAGTGACGTTACCACAGGAGGCTaGGCAGGTTGCCAGTCTGTC +
Preference number: 4 (lower is better)
Translates to: MKRLLQPDSLTDTLWHSDVTTGG*AGCQSV
Trigger: GACAGACTGGCAACCTGCTCAGCCTCCTGTGGTAAC...GTCACTGTGCCAGAGAGTATCTGTCAGGCTGTCAGGTTGTAGCAACCTCTTCAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR TCA 90 bp TCCACAGCAGCGAGATTTAAACTGGCTGAGTTGGCAGAGTTTCAGCTGTTTCACTGTTGCACAGCTAGGTaGGGCCCGATGCAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: STAARFKLAELAEFQLFHCCTAR*GPMQGP
Trigger: TGGGCCTTGCATCGGGCCTCACCTAGCTGTGCAACA...GTGAAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAATCTCGCTGCTGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR TCA 90 bp TGGGGAAGAGGAGACAAAGGAGCAAAACACTCCTGTGTTTGTGATAGTGCGCTTTGTTGCACAGCTAGGTaGGGCCCGATGCAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: WGRGDKGAKHSCVCDSALCCTAR*GPMQGP
Trigger: TGGGCCTTGCATCGGGCCTCACCTAGCTGTGCAACA...AAGCGCACTATCACAAACACAGGAGTGTTTTGCTCCTTTGTCTCCTCTTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp GGGAAGGAGGCAAAAATTACTTGGCCAAAGCTGCTCGGCTTAATGAGGATTTTGGTCCTCCTCGGAGCGTaGGGTCCTGGAACTCAGGAG +
Preference number: 4 (lower is better)
Translates to: GKEAKITWPKLLGLMRILVLLGA*GPGTQE
Trigger: CTCCTGAGTTCCAGGACCGCACGCTCCGAGGAGGAC...CAAAATCCTCATTAAGCCGAGCAGCTTTGGCCAAGTAATTTTTGCCTCCTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp AGGTTCATTATCGTTTTGGTGGAGGTGTTGTTCCCTGGCTGTTTAGTGGGGCCACTTCACAGCTCTTGCTaGTCAGGCAGCGCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: RFIIVLVEVLFPGCLVGPLHSSC*SGSASE
Trigger: CTCTGAGGCGCTGCCTGAGCAGCAAGAGCTGTGAAG...TGGCCCCACTAAACAGCCAGGGAACAACACCTCCACCAAAACGATAATGAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380570.8
CDS-3UTR GCA 90 bp CTCAGAAGGACAGGCTTCCTCTTTGGGACTGCAGCTGGTAACCTGACTTGTCCCTGGACCCATCTCCGTTaGAGACCCCACAGTTATCTT +
Preference number: 4 (lower is better)
Translates to: LRRTGFLFGTAAGNLTCPWTHLR*RPHSYL
Trigger: AAGATAACTGTGGGGTCTGCAACGGAGATGGGTCCA...GGGACAAGTCAGGTTACCAGCTGCAGTCCCAAAGAGGAAGCCTGTCCTTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380570.8
CDS-3UTR GCA 90 bp GAGAGGGAGGGTGTACTGTGGACACGCATAAACCCATTGTCCCACCCCGGTCCCATCATCCGATTTGGTTaGGGAGAGCTGGGATTTATA +
Preference number: 4 (lower is better)
Translates to: EREGVLWTRINPLSHPGPIIRFG*GELGFI
Trigger: TATAAATCCCAGCTCTCCGCAACCAAATCGGATGAT...GGGACCGGGGTGGGACAATGGGTTTATGCGTGTCCACAGTACACCCTCCCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp CTGCCTCAGCATGGTGTCCCCTCCCCATTTGTCCTAACTGTGACTAAAGGGACATTCCTCGATGGTCGATaGAGAGGACCACACGGTATC +
Preference number: 4 (lower is better)
Translates to: LPQHGVPSPFVLTVTKGTFLDGR*RGPHGI
Trigger: GATACCGTGTGGTCCTCTGCATCGACCATCGAGGAA...TGTCCCTTTAGTCACAGTTAGGACAAATGGGGAGGGGACACCATGCTGAGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp CCTCCTTCCACATTAGCCAGCAGCCTTCATTGTCTTGTGGTGCTGCTGAGTTGCCTACAGCCTCCTGTGTaGATTCCTCGATGGTCGATG +
Preference number: 4 (lower is better)
Translates to: PPSTLASSLHCLVVLLSCLQPPV*IPRWSM
Trigger: CATCGACCATCGAGGAATGCACACAGGAGGCTGTAG...GCAACTCAGCAGCACCACAAGACAATGAAGGCTGCTGGCTAATGTGGAAGGAGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp TTGTGTTTTAGAGGAGAAAGTGCCTCCTTCCACATTAGCCAGCAGCCTTCATTGCCCGCTGCATGGGCCTaGATAACAGGCACGCTGGGA +
Preference number: 4 (lower is better)
Translates to: LCFRGESASFHISQQPSLPAAWA*ITGTLG
Trigger: TCCCAGCGTGCCTGTTATGCAGGCCCATGCAGCGGG...CAATGAAGGCTGCTGGCTAATGTGGAAGGAGGCACTTTCTCCTCTAAAACACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp GGTTCACTCCTGATGTGCCTCAGAAGGACAGGCTTCCTCTTTGGGACTGCAGCTCCATGCTTGGATCCTTaGCGGAATCAGAATCGGACA +
Preference number: 4 (lower is better)
Translates to: GSLLMCLRRTGFLFGTAAPCLDP*RNQNRT
Trigger: TGTCCGATTCTGATTCCGGCAAGGATCCAAGCATGG...AGCTGCAGTCCCAAAGAGGAAGCCTGTCCTTCTGAGGCACATCAGGAGTGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380570.8
CDS-3UTR GCA 90 bp TGCTGCCTCCACCACCCCGCCTTGCTAGATAAATACTACATGCCGGAGGACCTGTACATGGACTCCACTTaGCAATTTCCCACCTTGCTG +
Preference number: 4 (lower is better)
Translates to: CCLHHPALLDKYYMPEDLYMDST*QFPTLL
Trigger: CAGCAAGGTGGGAAATTGGCAAGTGGAGTCCATGTA...CAGGTCCTCCGGCATGTAGTATTTATCTAGCAAGGCGGGGTGGTGGAGGCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp CCCTATCTTCACGCTTTGCCACAAGTTCCACAGCAGCGAGATTTAAACTGGCTGCCTTCGTGCAGATGGTaGGGGGAGCCCAGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: PYLHALPQVPQQRDLNWLPSCRW*GEPSLL
Trigger: AAGCAAACTGGGCTCCCCGCACCATCTGCACGAAGG...CAGCCAGTTTAAATCTCGCTGCTGTGGAACTTGTGGCAAAGCGTGAAGATAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR GCA 90 bp CCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTTCACGCTTTGCCAAGGATCTGTCCAGCTaGCAAGATGTGATGCGTCAG +
Preference number: 4 (lower is better)
Translates to: PSCGQGRVFPHTLSSRFAKDLSS*QDVMRQ
Trigger: CTGACGCATCACATCTTGGCAGCTGGACAGATCCTT...GGCAAAGCGTGAAGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR GCA 90 bp GCTGTTTCACCTTCTCGCAGTACCTGGTGGTGTCTCTGCACTCCATGTTTTCACCTGCATGAGCACCCCTaGCTCATTCTGAGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: AVSPSRSTWWCLCTPCFHLHEHP*LILSKA
Trigger: TGCCTTGCTCAGAATGAGGCAGGGGTGCTCATGCAG...GTGAAAACATGGAGTGCAGAGACACCACCAGGTACTGCGAGAAGGTGAAACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR GCA 90 bp TTCCTGTGGAAACCTTCCCGTCAGCAAGTCAAACTGCTGATATTAATGAGCATGGGCAGTCTCTCCGGTTaGACGCGATGGGCTGCACCG +
Preference number: 4 (lower is better)
Translates to: FLWKPSRQQVKLLILMSMGSLSG*TRWAAP
Trigger: CGGTGCAGCCCATCGCGTGCAACCGGAGAGACTGCC...CATGCTCATTAATATCAGCAGTTTGACTTGCTGACGGGAAGGTTTCCACAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380538.4
CDS-3UTR GCA 90 bp TGGGCCATTCATGCTCAAAATGGCCCTGGCCCACAGCAGCAGTTAGTTAGTGCGGGAAGAGCACTGCACTaGTCTGATGGTAAGGTGATG +
Preference number: 4 (lower is better)
Translates to: WAIHAQNGPGPQQQLVSAGRALH*SDGKVM
Trigger: CATCACCTTACCATCAGAGCAGTGCAGTGCTCTTCC...CGCACTAACTAACTGCTGCTGTGGGCCAGGGCCATTTTGAGCATGAATGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp GGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTGGAAGAGCACTGCACTaGTCTGATGGTAAGGTGATG +
Preference number: 4 (lower is better)
Translates to: GCVSPSCGQGRVFPHTLSGRALH*SDGKVM
Trigger: CATCACCTTACCATCAGAGCAGTGCAGTGCTCTTCC...AGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR GCA 90 bp TGCCTGGCCTGCTCTGCAACCTCCTTTAGACATCTGTCCTTTCCTTTCCCAACACTCTCCAGTGTACACTaGAGGCCTCTGACCAGCAGT +
Preference number: 4 (lower is better)
Translates to: CLACSATSFRHLSFPFPTLSSVH*RPLTSS
Trigger: ACTGCTGGTCAGAGGCCTGCAGTGTACACTGGAGAG...TGTTGGGAAAGGAAAGGACAGATGTCTAAAGGAGGTTGCAGAGCAGGCCAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp AGATTTAAACTGGCTGAGTTGGCAGAGTTTCAGCTGTTTCACCTTCTCGCAGTAGTGATGTTGCAGCGCTaGCAGTTGGCAGGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: RFKLAELAEFQLFHLLAVVMLQR*QLAGRG
Trigger: GCCCCGGCCTGCCAACTGGCAGCGCTGCAACATCAC...TACTGCGAGAAGGTGAAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR GCA 90 bp GGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTAACCTGGTGGTGTCTCTaGACTCCATGTTTTCACATG +
Preference number: 4 (lower is better)
Translates to: GGCVSPSCGQGRVFPHTLTWWCL*TPCFHM
Trigger: CATGTGAAAACATGGAGTGCAGAGACACCACCAGGT...TAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR GCA 90 bp GGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTCCTATCTTCACGCTTTaGCACAAGTTCCACAGCAGC +
Preference number: 4 (lower is better)
Translates to: GCVSPSCGQGRVFPHTLSPIFTL*HKFHSS
Trigger: GCTGCTGTGGAACTTGTGGCAAAGCGTGAAGATAGG...AGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR GCA 90 bp CAGATGCCCAATGTAGATTGCACCTCTAATGGTTCCCCATGTCTGGTAGCATGTAGAAGAGTGTGGAGCTaGTCAGGGTACCCGGTGGGG +
Preference number: 4 (lower is better)
Translates to: QMPNVDCTSNGSPCLVACRRVWS*SGYPVG
Trigger: CCCCACCGGGTACCCTGAGCAGCTCCACACTCTTCT...ACATGCTACCAGACATGGGGAACCATTAGAGGTGCAATCTACATTGGGCATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR CCA 90 bp GGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTGTATCCGTCACTGGCTaGACAAGGATCCAAGTTGCA +
Preference number: 4 (lower is better)
Translates to: GCVSPSCGQGRVFPHTLSVSVTG*TRIQVA
Trigger: TGCAACTTGGATCCTTGTCCAGCCAGTGACGGATAC...AGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp TGGGCCATTCATGCTCAAAATGGCCCTGGCCCACAGCAGCAGTTAGTTAGTGCGGCTTGTATCCGTCACTaGCTGGACAAGGATCCAAGT +
Preference number: 4 (lower is better)
Translates to: WAIHAQNGPGPQQQLVSAACIRH*LDKDPS
Trigger: ACTTGGATCCTTGTCCAGCCAGTGACGGATACAAGC...CGCACTAACTAACTGCTGCTGTGGGCCAGGGCCATTTTGAGCATGAATGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp AGCTTTGGTGAGATGATTACACTTAGTTCAGAACCCATGAAAGCTACAACCAGTGGAGCACGCGGTCCATaGGGTGGCCTCCCACCGAGG +
Preference number: 4 (lower is better)
Translates to: SFGEMITLSSEPMKATTSGARGP*GGLPPR
Trigger: CCTCGGTGGGAGGCCACCCCATGGACCGCGTGCTCC...ACTGGTTGTAGCTTTCATGGGTTCTGAACTAAGTGTAATCATCTCACCAAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR CCA 90 bp TCAACAACTGTTCTTGTCTGTGAGTCAACAAAAGGGTCACAGGATAACCTAACCGGACTTCAGGAGCTGTaGGGGCCGGCGGCTGGTCAC +
Preference number: 4 (lower is better)
Translates to: STTVLVCESTKGSQDNLTGLQEL*GPAAGH
Trigger: GTGACCAGCCGCCGGCCCCCACAGCTCCTGAAGTCC...GGTTAGGTTATCCTGTGACCCTTTTGTTGACTCACAGACAAGAACAGTTGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CCA 90 bp CCCCATGTCTGGTTCACTCCTGATGTGCCTCAGAAGGACAGGCTTCCTCTTTGGGCAGCATTCCATGCTTaGATCCTTGCCGGAATCAGA +
Preference number: 4 (lower is better)
Translates to: PHVWFTPDVPQKDRLPLWAAFHA*ILAGIR
Trigger: TCTGATTCCGGCAAGGATCCAAGCATGGAATGCTGC...CCAAAGAGGAAGCCTGTCCTTCTGAGGCACATCAGGAGTGAACCAGACATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380570.8
CDS-3UTR CCA 90 bp GGAATTTGTCCAATGTTTGCACCAATAGGCTACAAACCTTCTGGCTCCCTGCTGAAGCTTGCACCGTGCTaGGCTTGGGCTGGCGACACA +
Preference number: 4 (lower is better)
Translates to: GICPMFAPIGYKPSGSLLKLAPC*AWAGDT
Trigger: TGTGTCGCCAGCCCAAGCCCAGCACGGTGCAAGCTT...CAGCAGGGAGCCAGAAGGTTTGTAGCCTATTGGTGCAAACATTGGACAAATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp TGGGCCAGCTCTGGAATGAAGAGGTTGCTACAACCTGACAGCCTGACAGATACTTGCAGGGTACCAGGCTaGGGGGCAATTAAAGCGGTT +
Preference number: 4 (lower is better)
Translates to: WASSGMKRLLQPDSLTDTCRVPG*GAIKAV
Trigger: AACCGCTTTAATTGCCCCCCAGCCTGGTACCCTGCA...AGTATCTGTCAGGCTGTCAGGTTGTAGCAACCTCTTCATTCCAGAGCTGGCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp TGGGGAAGAGGAGACAAAGGAGCAAAACACTCCTGTGTTTGTGATAGTGCGCTTTCTTGCGCAGGATGGTaGGCTTGCGGTGTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: WGRGDKGAKHSCVCDSALSCAGW*ACGVAF
Trigger: GAAGGCCACACCGCAAGCCCACCATCCTGCGCAAGA...AAGCGCACTATCACAAACACAGGAGTGTTTTGCTCCTTTGTCTCCTCTTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp AGCCAGCAGCCTTCATTGTCTTGTGGTGCTGCTGAGTTGCAATTCACAGAACAAATGGTAGGCCTTGGGTaGCCGATGGCCTCACAGTGC +
Preference number: 4 (lower is better)
Translates to: SQQPSLSCGAAELQFTEQMVGLG*PMASQC
Trigger: GCACTGTGAGGCCATCGGCCACCCAAGGCCTACCAT...TTGTTCTGTGAATTGCAACTCAGCAGCACCACAAGACAATGAAGGCTGCTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp TCCACAGCAGCGAGATTTAAACTGGCTGAGTTGGCAGAGTTTCAGCTGTTTCACGAGCCTTCGTGCAGATaGTGCGGGGAGCCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: STAARFKLAELAEFQLFHEPSCR*CGEPSL
Trigger: CAAACTGGGCTCCCCGCACCATCTGCACGAAGGCTC...GTGAAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAATCTCGCTGCTGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR CCA 90 bp TGGGCCAGCTCTGGAATGAAGAGGTTGCTACAACCTGACAGCCTGACAGATACTGCTCTCCATGAAGATTaGCCGCCCTGCAGGAGTACA +
Preference number: 4 (lower is better)
Translates to: WASSGMKRLLQPDSLTDTALHED*PPCRST
Trigger: TGTACTCCTGCAGGGCGGCCAATCTTCATGGAGAGC...AGTATCTGTCAGGCTGTCAGGTTGTAGCAACCTCTTCATTCCAGAGCTGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CCA 90 bp AGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTTCACGCTTTGCTCTCCATGAAGATTaGCCGCCCTGCAGGAGTACA +
Preference number: 4 (lower is better)
Translates to: SPSCGQGRVFPHTLSSRFALHED*PPCRST
Trigger: TGTACTCCTGCAGGGCGGCCAATCTTCATGGAGAGC...AAAGCGTGAAGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR CCA 90 bp GGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTATGCCATCCCGTGTCTaGCAGAAGACTTGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: GCVSPSCGQGRVFPHTLSMPSRV*QKTCLC
Trigger: ACACAGACAAGTCTTCTGCCAGACACGGGATGGCAT...AGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR CCA 90 bp CCCTATCTTCACGCTTTGCCACAAGTTCCACAGCAGCGAGATTTAAACTGGCTGTCTGACCAGCAGTTCTaGGTGCTCACAGGCCTCGGA +
Preference number: 4 (lower is better)
Translates to: PYLHALPQVPQQRDLNWLSDQQF*VLTGLG
Trigger: TCCGAGGCCTGTGAGCACCCAGAACTGCTGGTCAGA...CAGCCAGTTTAAATCTCGCTGCTGTGGAACTTGTGGCAAAGCGTGAAGATAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR CCA 90 bp TGGGCCAGCTCTGGAATGAAGAGGTTGCTACAACCTGACAGCCTGACAGATACTCCTTCTCGCAGTACCTaGTGGTGTCTCTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: WASSGMKRLLQPDSLTDTPSRST*WCLCTP
Trigger: TGGAGTGCAGAGACACCACCAGGTACTGCGAGAAGG...AGTATCTGTCAGGCTGTCAGGTTGTAGCAACCTCTTCATTCCAGAGCTGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CCA 90 bp CTGTTTCACCTTCTCGCAGTACCTGGTGGTGTCTCTGCACTCCATGTTTTCACAGGTGGCCTTACTGCATaGCGAGACCCACCTCTCACT +
Preference number: 4 (lower is better)
Translates to: LFHLLAVPGGVSALHVFTGGLTA*RDPPLT
Trigger: AGTGAGAGGTGGGTCTCGCCATGCAGTAAGGCCACC...TGTGAAAACATGGAGTGCAGAGACACCACCAGGTACTGCGAGAAGGTGAAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542621.5
CDS-3UTR CCA 90 bp TTTGTCATTTCTGAGGCGGAGGGCACAATGGCTTATTTCATCTTTCTGTTTCCTACGCGGTCCATGGGGTaGCCTCCCACCTGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: FVISEAEGTMAYFIFLFPTRSMG*PPTWLD
Trigger: GTCCAGCCAGGTGGGAGGCCACCCCATGGACCGCGT...AGGAAACAGAAAGATGAAATAAGCCATTGTGCCCTCCGCCTCAGAAATGACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR TCA 90 bp GCATTTGGGTGTTGTTACAACACAGGAATGTGGTTAGAAAGACCCTTTTGCATGACCCCCGCAGGTGCGTaGGCATTCACTCCATGGGCC +
Preference number: 4 (lower is better)
Translates to: AFGCCYNTGMWLERPFCMTPAGA*AFTPWA
Trigger: GGCCCATGGAGTGAATGCTCACGCACCTGCGGGGGT...CATGCAAAAGGGTCTTTCTAACCACATTCCTGTGTTGTAACAACACCCAAATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR TCA 90 bp CCCCATGTCTGGTTCACTCCTGATGTGCCTCAGAAGGACAGGCTTCCTCTTTGGGACATCATTATGAGCTaGGCATTGCTGAGCTCGGAA +
Preference number: 4 (lower is better)
Translates to: PHVWFTPDVPQKDRLPLWDIIMS*ALLSSE
Trigger: TTCCGAGCTCAGCAATGCTCAGCTCATAATGATGTC...CCAAAGAGGAAGCCTGTCCTTCTGAGGCACATCAGGAGTGAACCAGACATGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380570.8
CDS-3UTR TCA 90 bp AGCTTAGGTTCTGTCCGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAATCCTGTCACTGAACTaGACTTCTTCTCCATTCCTG +
Preference number: 4 (lower is better)
Translates to: SLGSVRGGCVSPSCGQGRILSLN*TSSPFL
Trigger: CAGGAATGGAGAAGAAGTTCAGTTCAGTGACAGGAT...TCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCGGACAGAACCTAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR TCA 90 bp CCTCCTTCCACATTAGCCAGCAGCCTTCATTGTCTTGTGGTGCTGCTGAGTTGCTTCCTATATCGACTGTaGCTGCAGGCTTCTCCGTGT +
Preference number: 4 (lower is better)
Translates to: PPSTLASSLHCLVVLLSCFLYRL*LQASPC
Trigger: ACACGGAGAAGCCTGCAGTCACAGTCGATATAGGAA...GCAACTCAGCAGCACCACAAGACAATGAAGGCTGCTGGCTAATGTGGAAGGAGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR TCA 90 bp TGTCTTCCTCTCAAATTTTACTTCCAGGCTGGCTGGAAATGCAGCCCTGATGTCTCAGTCAGCTCTCCATaGAGATTGGCCGCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: CLPLKFYFQAGWKCSPDVSVSSP*RLAALQ
Trigger: CTGCAGGGCGGCCAATCTTCATGGAGAGCTGACTGA...GACATCAGGGCTGCATTTCCAGCCAGCCTGGAAGTAAAATTTGAGAGGAAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR TCA 90 bp TGGGGAAGAGGAGACAAAGGAGCAAAACACTCCTGTGTTTGTGATAGTGCGCTTCCAGCTGCCAAGATGTaGTGCGTCAGTCCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: WGRGDKGAKHSCVCDSALPAAKM*CVSPVA
Trigger: TGCCACAGGACTGACGCATCACATCTTGGCAGCTGG...AAGCGCACTATCACAAACACAGGAGTGTTTTGCTCCTTTGTCTCCTCTTCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR TCA 90 bp TGCTGCCTCCACCACCCCGCCTTGCTAGATAAATACTACATGCCGGAGGACCTGTACTCTCTGGCACAGTaGCTAGTTAATGGGTTGATG +
Preference number: 4 (lower is better)
Translates to: CCLHHPALLDKYYMPEDLYSLAQ*LVNGLM
Trigger: CATCAACCCATTAACTAGTCACTGTGCCAGAGAGTA...CAGGTCCTCCGGCATGTAGTATTTATCTAGCAAGGCGGGGTGGTGGAGGCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp CCTCAATTACCCTTGAAAGGCAGTTGCTTCCCCGTGCTATTTGAGGGAACATTAGAAAGAGGAGCAGTGTaGCAGGAGTTGCCCGACGGC +
Preference number: 4 (lower is better)
Translates to: PQLPLKGSCFPVLFEGTLERGAV*QELPDG
Trigger: GCCGTCGGGCAACTCCTGGCACACTGCTCCTCTTTC...TAATGTTCCCTCAAATAGCACGGGGAAGCAACTGCCTTTCAAGGGTAATTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR GCA 90 bp TGCCTGGCCTGCTCTGCAACCTCCTTTAGACATCTGTCCTTTCCTTTCCCAACACCATCAGCCATGCGCTaGTTGCAAAGAACCTCACGT +
Preference number: 4 (lower is better)
Translates to: CLACSATSFRHLSFPFPTPSAMR*LQRTSR
Trigger: ACGTGAGGTTCTTTGCAAGCAGCGCATGGCTGATGG...TGTTGGGAAAGGAAAGGACAGATGTCTAAAGGAGGTTGCAGAGCAGGCCAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp TCCTGTGTTTGTGATAGTGCGCTTCTAGGAAAGACACAGGAATTTGTCCAATGTCTTTCCGCAGAGTCCTaGGCCTCCCACGAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SCVCDSALLGKTQEFVQCLSAES*ASHEAS
Trigger: GCTGGCCTCGTGGGAGGCGCAGGACTCTGCGGAAAG...ACATTGGACAAATTCCTGTGTCTTTCCTAGAAGCGCACTATCACAAACACAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp CGAGCATTCTGCTTCCCACCCAAACCTAGGTTCTGCCAGCTCACTGAGACCCACTATATCGACTGTGACTaGAGGCTTCTCCGTGTTGAT +
Preference number: 4 (lower is better)
Translates to: RAFCFPPKPRFCQLTETHYIDCD*RLLRVD
Trigger: ATCAACACGGAGAAGCCTGCAGTCACAGTCGATATA...GTGGGTCTCAGTGAGCTGGCAGAACCTAGGTTTGGGTGGGAAGCAGAATGCTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp AGCCAGCAGCCTTCATTGTCTTGTGGTGCTGCTGAGTTGCAATTCACAGAACAAGAAGATTGGCCGCCCTaGAGGAGTACAGGCCCTGAT +
Preference number: 4 (lower is better)
Translates to: SQQPSLSCGAAELQFTEQEDWPP*RSTGPD
Trigger: ATCAGGGCCTGTACTCCTGCAGGGCGGCCAATCTTC...TTGTTCTGTGAATTGCAACTCAGCAGCACCACAAGACAATGAAGGCTGCTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp AGTTCCACAGCAGCGAGATTTAAACTGGCTGAGTTGGCAGAGTTTCAGCTGTTTCAGGTGCTCAGGCACTaGCTTGTTGGTGCGGGCATG +
Preference number: 4 (lower is better)
Translates to: SSTAARFKLAELAEFQLFQVLRH*LVGAGM
Trigger: CATGCCCGCACCAACAAGGCAGTGCCTGAGCACCTG...AAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAATCTCGCTGCTGTGGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR GCA 90 bp GGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTACCTGGTGGTGTCTCTaGACTCCATGTTTTCACATG +
Preference number: 4 (lower is better)
Translates to: GCVSPSCGQGRVFPHTLSTWWCL*TPCFHM
Trigger: CATGTGAAAACATGGAGTGCAGAGACACCACCAGGT...AGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR GCA 90 bp AGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTTCACGCTTTACTGTCTGCCTGGCCTaGTCTGCAACCTCCTTTAGA +
Preference number: 4 (lower is better)
Translates to: SPSCGQGRVFPHTLSSRFTVCLA*SATSFR
Trigger: TCTAAAGGAGGTTGCAGAGCAGGCCAGGCAGACAGT...AAAGCGTGAAGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542621.5
CDS-3UTR GCA 90 bp GTTTGTGATAGTGCGCTTCTAGGAAAGACACAGGAATTTGTCCAATGTTTGCACGGAGCCCCCACTGTCTaGCTGGCCTGCTCTGCAACC +
Preference number: 4 (lower is better)
Translates to: VCDSALLGKTQEFVQCLHGAPTV*LACSAT
Trigger: GGTTGCAGAGCAGGCCAGGCAGACAGTGGGGGCTCC...GTGCAAACATTGGACAAATTCCTGTGTCTTTCCTAGAAGCGCACTATCACAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp GTTTGTGATAGTGCGCTTCTAGGAAAGACACAGGAATTTGTCCAATGTTTGCACACATGCCGGAGGACCTaGAGACCCTGGGGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: VCDSALLGKTQEFVQCLHTCRRT*RPWGGG
Trigger: GCCTCCACCCCAGGGTCTGCAGGTCCTCCGGCATGT...GTGCAAACATTGGACAAATTCCTGTGTCTTTCCTAGAAGCGCACTATCACAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp TCCACAGCAGCGAGATTTAAACTGGCTGAGTTGGCAGAGTTTCAGCTGTTTCACCTAGGTGAGGCCCGATaGAAGGCCCATTGCACTTGG +
Preference number: 4 (lower is better)
Translates to: STAARFKLAELAEFQLFHLGEAR*KAHCTW
Trigger: CCAAGTGCAATGGGCCTTGCATCGGGCCTCACCTAG...GTGAAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAATCTCGCTGCTGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388710.8
CDS-3UTR CCA 90 bp AGCCCCATGTCTGGTTCACTCCTGATGTGCCTCAGAAGGACAGGCTTCCTCTTTATCACCTGCTTCTGGTaGGCAGTCCACATTACTGCA +
Preference number: 4 (lower is better)
Translates to: SPMSGSLLMCLRRTGFLFITCFW*AVHITA
Trigger: TGCAGTAATGTGGACTGCCCACCAGAAGCAGGTGAT...AAAGAGGAAGCCTGTCCTTCTGAGGCACATCAGGAGTGAACCAGACATGGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380570.8
CDS-3UTR CCA 90 bp GGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTTCACCTTTAGTCCCCTaGAGGGTTTTGGTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: GCVSPSCGQGRVFPHTLSSPLVP*RVLVSR
Trigger: TCTGGAAACCAAAACCCTCCAGGGGACTAAAGGTGA...AGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp GATCTCAGATCATCAGGTACAACCAGTTCACTTTGCAGATGTGGAAACATAAAGACGCGGTCCATGGGGTaGCCTCCCACCGAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: DLRSSGTTSSLCRCGNIKTRSMG*PPTEEG
Trigger: CCCTTCCTCGGTGGGAGGCCACCCCATGGACCGCGT...CTTTATGTTTCCACATCTGCAAAGTGAACTGGTTGTACCTGATGATCTGAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CCA 90 bp ATGATTACACTTAGTTCAGAACCCATGAAAGCTACAACCAGTGAGACACTGCTTACGCGGTCCATGGGGTaGCCTCCCACCGAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: MITLSSEPMKATTSETLLTRSMG*PPTEEG
Trigger: CCCTTCCTCGGTGGGAGGCCACCCCATGGACCGCGT...AAGCAGTGTCTCACTGGTTGTAGCTTTCATGGGTTCTGAACTAAGTGTAATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR CCA 90 bp ACGAGTCCCAGCAGTTTTAAGCAAGTCCCAGGCACTGACTCCTCGGCACTGCCTGTTTATAGCAGGGAGTaGGTACGATGCATTCCTCTT +
Preference number: 4 (lower is better)
Translates to: TSPSSFKQVPGTDSSALPVYSRE*VRCIPL
Trigger: AAGAGGAATGCATCGTACCCACTCCCTGCTATAAAC...AGGCAGTGCCGAGGAGTCAGTGCCTGGGACTTGCTTAAAACTGCTGGGACTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CCA 90 bp ACGAGTCCCAGCAGTTTTAAGCAAGTCCCAGGCACTGACTCCTCGGCACTGCCTCATGTGAGCAAGTCATaGGATCTCAGATCATCAGGT +
Preference number: 4 (lower is better)
Translates to: TSPSSFKQVPGTDSSALPHVSKS*DLRSSG
Trigger: ACCTGATGATCTGAGATCCCATGACTTGCTCACATG...AGGCAGTGCCGAGGAGTCAGTGCCTGGGACTTGCTTAAAACTGCTGGGACTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CCA 90 bp ATGAAGAGGTTGCTACAACCTGACAGCCTGACAGATACTCTCTGGCACAGTGACGCATCTTTCGGCAAATaGCGCTTCGAGTCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: MKRLLQPDSLTDTLWHSDASFGK*RFESGC
Trigger: GCACCCAGACTCGAAGCGCCATTTGCCGAAAGATGC...GTCACTGTGCCAGAGAGTATCTGTCAGGCTGTCAGGTTGTAGCAACCTCTTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp TTGTGTTTTAGAGGAGAAAGTGCCTCCTTCCACATTAGCCAGCAGCCTTCATTGGAGCTGATGAGGTGCTaGCCGTCCTTCTCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: LCFRGESASFHISQQPSLELMRC*PSFSQV
Trigger: CACCTGGGAGAAGGACGGCCAGCACCTCATCAGCTC...CAATGAAGGCTGCTGGCTAATGTGGAAGGAGGCACTTTCTCCTCTAAAACACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp AGCCAGCAGCCTTCATTGTCTTGTGGTGCTGCTGAGTTGCAATTCACAGAACAACCGCCTTGCTGCCGTTaGAGAAGATCCCGTTCTGGT +
Preference number: 4 (lower is better)
Translates to: SQQPSLSCGAAELQFTEQPPCCR*RRSRSG
Trigger: ACCAGAACGGGATCTTCTCCAACGGCAGCAAGGCGG...TTGTTCTGTGAATTGCAACTCAGCAGCACCACAAGACAATGAAGGCTGCTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp CCTCCTTCCACATTAGCCAGCAGCCTTCATTGTCTTGTGGTGCTGCTGAGTTGCGGCACTCCTGCAACCTaGCAGTTGATTGTCACATTC +
Preference number: 4 (lower is better)
Translates to: PPSTLASSLHCLVVLLSCGTPAT*QLIVTF
Trigger: GAATGTGACAATCAACTGCCAGGTTGCAGGAGTGCC...GCAACTCAGCAGCACCACAAGACAATGAAGGCTGCTGGCTAATGTGGAAGGAGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp GGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTTGTGGCAGTGACAATTaGCTGACCACCATGAAACCA +
Preference number: 4 (lower is better)
Translates to: GCVSPSCGQGRVFPHTLSCGSDN*LTTMKP
Trigger: TGGTTTCATGGTGGTCAGCCAATTGTCACTGCCACA...AGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR CCA 90 bp GGAATTTGTCCAATGTTTGCACCAATAGGCTACAAACCTTCTGGCTCCCTGCTGTCCACACACAGCTGCTaGTTACAGGCCTGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: GICPMFAPIGYKPSGSLLSTHSC*LQAWVS
Trigger: GGACACCCAGGCCTGTAACCAGCAGCTGTGTGTGGA...CAGCAGGGAGCCAGAAGGTTTGTAGCCTATTGGTGCAAACATTGGACAAATTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp CGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCTTAAACTGGCTGAGTTaGCAGAGTTTCAGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: RGGCVSPSCGQGRVFPHTLNWLS*QSFSCF
Trigger: GAAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAA...GGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR CCA 90 bp TCACGCTTTGCCACAAGTTCCACAGCAGCGAGATTTAAACTGGCTGAGTTGGCAAGGTTCTGTCCGAGGTaGTTGCGTGAGTCCTTCGTG +
Preference number: 4 (lower is better)
Translates to: SRFATSSTAARFKLAELARFCPR*LRESFV
Trigger: CACGAAGGACTCACGCAACCACCTCGGACAGAACCT...TGCCAACTCAGCCAGTTTAAATCTCGCTGCTGTGGAACTTGTGGCAAAGCGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542621.5
CDS-3UTR CCA 90 bp ATGAAGAGGTTGCTACAACCTGACAGCCTGACAGATACTCTCTGGCACAGTGACGCATGCGCACATGCATaGGATCAGAGCTGGTCCATG +
Preference number: 4 (lower is better)
Translates to: MKRLLQPDSLTDTLWHSDACAHA*DQSWSM
Trigger: CATGGACCAGCTCTGATCCCATGCATGTGCGCATGC...GTCACTGTGCCAGAGAGTATCTGTCAGGCTGTCAGGTTGTAGCAACCTCTTCAT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CCA 90 bp CCACAGCAGCGAGATTTAAACTGGCTGAGTTGGCAGAGTTTCAGCTGTTTCACCGTGGGTAAGGGACTCTaGCCACCCTTGCTCCTAAAC +
Preference number: 4 (lower is better)
Translates to: PQQRDLNWLSWQSFSCFTVGKGL*PPLLLN
Trigger: GTTTAGGAGCAAGGGTGGCCAGAGTCCCTTACCCAC...GGTGAAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAATCTCGCTGCTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542621.5
CDS-3UTR CCA 90 bp CACACCCTATCTTCACGCTTTGCCACAAGTTCCACAGCAGCGAGATTTAAACTGGGGGAGGCTTATCTGTaGGTAAGGGACTCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: HTLSSRFATSSTAARFKLGEAYL*VRDSGH
Trigger: GTGGCCAGAGTCCCTTACCCACAGATAAGCCTCCCC...CAGTTTAAATCTCGCTGCTGTGGAACTTGTGGCAAAGCGTGAAGATAGGGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542621.5
CDS-3UTR CCA 90 bp TTCATTCAGCCTCAATTACCCTTGAAAGGCAGTTGCTTCCCCGTGCTATTTGAGGGGTGGCCTCCCACCTaGCTGGACAAGGATCCAAGT +
Preference number: 4 (lower is better)
Translates to: FIQPQLPLKGSCFPVLFEGWPPT*LDKDPS
Trigger: ACTTGGATCCTTGTCCAGCCAGGTGGGAGGCCACCC...CTCAAATAGCACGGGGAAGCAACTGCCTTTCAAGGGTAATTGAGGCTGAATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR TCA 90 bp GTTCATTATCGTTTTGGTGGAGGTGTTGTTCCCTGGCTGTTTAGTGGGGCCAGACACAGTTATCTTCCTTaGCGGTGCTTCCCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: VHYRFGGGVVPWLFSGARHSYLP*RCFPAG
Trigger: ACCAGCTGGGAAGCACCGTCAAGGAAGATAACTGTG...TCTGGCCCCACTAAACAGCCAGGGAACAACACCTCCACCAAAACGATAATGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380570.8
CDS-3UTR TCA 90 bp GAGTGTGGAGCTGCTCAGGGTACCCGGTGGGGCCATGATGATGAGAGGGAAGAGGTTTCCAGATATAAGTaGTCAGGACCTTTTAAGACA +
Preference number: 4 (lower is better)
Translates to: ECGAAQGTRWGHDDEREEVSRYK*SGPFKT
Trigger: TGTCTTAAAAGGTCCTGATCACTTATATCTGGAAAC...CTCTTCCCTCTCATCATCATGGCCCCACCGGGTACCCTGAGCAGCTCCACACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR TCA 90 bp CTATTCGTTTTGGTGCTCAAAGAAGGGTTTAGGGACCACGAGTCCCAGCAGTTTTTGGTGACAGCAGGATaGGAAGCCAGGCCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: LFVLVLKEGFRDHESQQFLVTAG*EARPLG
Trigger: ACCAAGAGGCCTGGCTTCTCATCCTGCTGTCACCAA...AAACTGCTGGGACTCGTGGTCCCTAAACCCTTCTTTGAGCACCAAAACGAATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR TCA 90 bp AAACACTCCTGTGTTTGTGATAGTGCGCTTCTAGGAAAGACACAGGAATTTGTCGCTCGGTCACCATGGTaGAGGGCAGGTGCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: KHSCVCDSALLGKTQEFVARSPW*RAGAGA
Trigger: TGCTCCTGCACCTGCCCTTCACCATGGTGACCGAGC...GACAAATTCCTGTGTCTTTCCTAGAAGCGCACTATCACAAACACAGGAGTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR TCA 90 bp AGCCAGCAGCCTTCATTGTCTTGTGGTGCTGCTGAGTTGCAATTCACAGAACAACCAGACACGTGTTTATaGGGCGAGAGAGTCACTGGG +
Preference number: 4 (lower is better)
Translates to: SQQPSLSCGAAELQFTEQPDTCL*GERVTG
Trigger: CCCAGTGACTCTCTCGCCTCATAAACACGTGTCTGG...TTGTTCTGTGAATTGCAACTCAGCAGCACCACAAGACAATGAAGGCTGCTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR TCA 90 bp CACACCCTATCTTCACGCTTTGCCACAAGTTCCACAGCAGCGAGATTTAAACTGAGGAGGACACGTTTGTaGGCAGCAAGGAGCCTTCGT +
Preference number: 4 (lower is better)
Translates to: HTLSSRFATSSTAARFKLRRTRL*AARSLR
Trigger: ACGAAGGCTCCTTGCTGCTCACAAACGTGTCCTCCT...CAGTTTAAATCTCGCTGCTGTGGAACTTGTGGCAAAGCGTGAAGATAGGGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR TCA 90 bp GAAAGGAGCGGGCCAGGCTATGTTACAGTTCAGGAAGGGTATAAAAGGACATTACCAGCTGCCAAGATGTaGTGCGTCAGTCCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: ERSGPGYVTVQEGYKRTLPAAKM*CVSPVA
Trigger: TGCCACAGGACTGACGCATCACATCTTGGCAGCTGG...TAATGTCCTTTTATACCCTTCCTGAACTGTAACATAGCCTGGCCCGCTCCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380538.4
CDS-3UTR TCA 90 bp CAGCAGCGAGATTTAAACTGGCTGAGTTGGCAGAGTTTCAGCTGTTTCACCTTCTCTGAGCAAGGCAGCTaGATTCCCCTTGAGACCCAC +
Preference number: 4 (lower is better)
Translates to: QQRDLNWLSWQSFSCFTFSEQGS*IPLETH
Trigger: GTGGGTCTCAAGGGGAATTCAGCTGCCTTGCTCAGA...GAAGGTGAAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAATCTCGCTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR TCA 90 bp GTTCCACAGCAGCGAGATTTAAACTGGCTGAGTTGGCAGAGTTTCAGCTGTTTCACCCCTGCCTCATTCTaGGCAAGGCAGCTGAATTCC +
Preference number: 4 (lower is better)
Translates to: VPQQRDLNWLSWQSFSCFTPASF*ARQLNS
Trigger: GGAATTCAGCTGCCTTGCTCAGAATGAGGCAGGGGT...GAAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAATCTCGCTGCTGTGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR TCA 90 bp TGTCTTCCTCTCAAATTTTACTTCCAGGCTGGCTGGAAATGCAGCCCTGATGTCACCCCTGCCTCATTCTaGGCAAGGCAGCTGAATTCC +
Preference number: 4 (lower is better)
Translates to: CLPLKFYFQAGWKCSPDVTPASF*ARQLNS
Trigger: GGAATTCAGCTGCCTTGCTCAGAATGAGGCAGGGGT...GACATCAGGGCTGCATTTCCAGCCAGCCTGGAAGTAAAATTTGAGAGGAAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR TCA 90 bp CCACAGCAGCGAGATTTAAACTGGCTGAGTTGGCAGAGTTTCAGCTGTTTCACCAAGATGCCTTCTGCATaGGCACCCCTGCCTCATTCT +
Preference number: 4 (lower is better)
Translates to: PQQRDLNWLSWQSFSCFTKMPSA*APLPHS
Trigger: AGAATGAGGCAGGGGTGCTCATGCAGAAGGCATCTT...GGTGAAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAATCTCGCTGCTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR TCA 90 bp AGGAGCGGGCCAGGCTATGTTACAGTTCAGGAAGGGTATAAAAGGACATTAATCGTTACCACAGGAGGCTaGGCAGGTTGCCAGTCTGTC +
Preference number: 4 (lower is better)
Translates to: RSGPGYVTVQEGYKRTLIVTTGG*AGCQSV
Trigger: GACAGACTGGCAACCTGCTCAGCCTCCTGTGGTAAC...GATTAATGTCCTTTTATACCCTTCCTGAACTGTAACATAGCCTGGCCCGCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380538.4
CDS-3UTR TCA 90 bp AGCGGGCCAGGCTATGTTACAGTTCAGGAAGGGTATAAAAGGACATTAATCATTCGCAGTGGGCAGGGTTaGCCTCCGTGCTGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: SGPGYVTVQEGYKRTLIIRSGQG*PPCCSA
Trigger: TGCTGAACAGCACGGAGGTCAACCCTGCCCACTGCG...AATGATTAATGTCCTTTTATACCCTTCCTGAACTGTAACATAGCCTGGCCCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380538.4
CDS-3UTR TCA 90 bp CCACAGCAGCGAGATTTAAACTGGCTGAGTTGGCAGAGTTTCAGCTGTTTCACCTGTTTTCACATGGGGTaGTGTTGCAGCGCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: PQQRDLNWLSWQSFSCFTCFHMG*CCSAAS
Trigger: ACTGGCAGCGCTGCAACATCACCCCATGTGAAAACA...GGTGAAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAATCTCGCTGCTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR TCA 90 bp TGGGGAAGAGGAGACAAAGGAGCAAAACACTCCTGTGTTTGTGATAGTGCGCTTATCAGAGCTGGTCCATaGGCCTCATGCAGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: WGRGDKGAKHSCVCDSALIRAGP*ASCSLE
Trigger: TTCCAGGCTGCATGAGGCTCATGGACCAGCTCTGAT...AAGCGCACTATCACAAACACAGGAGTGTTTTGCTCCTTTGTCTCCTCTTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR TCA 90 bp GTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTTCACGCTACTCTCTGGCACAGTaGCTAGTTAATGGGTTGATG +
Preference number: 4 (lower is better)
Translates to: VSPSCGQGRVFPHTLSSRYSLAQ*LVNGLM
Trigger: CATCAACCCATTAACTAGTCACTGTGCCAGAGAGTA...GCGTGAAGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542621.5
CDS-3UTR TCA 90 bp ACCCTATCTTCACGCTTTGCCACAAGTTCCACAGCAGCGAGATTTAAACTGGCTGGGCCAGCTCTGGAATaGAGAGGTTGCTACAACCTG +
Preference number: 4 (lower is better)
Translates to: TLSSRFATSSTAARFKLAGPALE*RGCYNL
Trigger: CAGGTTGTAGCAACCTCTTCATTCCAGAGCTGGCCC...AGCCAGTTTAAATCTCGCTGCTGTGGAACTTGTGGCAAAGCGTGAAGATAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542621.5
CDS-3UTR TCA 90 bp ATGAAGAGGTTGCTACAACCTGACAGCCTGACAGATACTCTCTGGCACAGTGACGTGAGTGGCATTTCATaGGGGGAGGCTTATCTGTGG +
Preference number: 4 (lower is better)
Translates to: MKRLLQPDSLTDTLWHSDVSGIS*GEAYLW
Trigger: CCACAGATAAGCCTCCCCTCATGAAATGCCACTCAC...GTCACTGTGCCAGAGAGTATCTGTCAGGCTGTCAGGTTGTAGCAACCTCTTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR TCA 90 bp GTTCATTATCGTTTTGGTGGAGGTGTTGTTCCCTGGCTGTTTAGTGGGGCCAGATGTCTGGTTCACTCCTaGTGTGCCTCAGAAGGACAG +
Preference number: 4 (lower is better)
Translates to: VHYRFGGGVVPWLFSGARCLVHS*CASEGQ
Trigger: CTGTCCTTCTGAGGCACATCAGGAGTGAACCAGACA...TCTGGCCCCACTAAACAGCCAGGGAACAACACCTCCACCAAAACGATAATGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380570.8
CDS-3UTR GCA 90 bp TTTGTCATTTCTGAGGCGGAGGGCACAATGGCTTATTTCATCTTTCTGTTTCCTCCCCACCCCCGCAGGTaGGTGAGCATTCACTCCATG +
Preference number: 4 (lower is better)
Translates to: FVISEAEGTMAYFIFLFPPHPRR*VSIHSM
Trigger: CATGGAGTGAATGCTCACGCACCTGCGGGGGTGGGG...AGGAAACAGAAAGATGAAATAAGCCATTGTGCCCTCCGCCTCAGAAATGACAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR GCA 90 bp ACGAGTCCCAGCAGTTTTAAGCAAGTCCCAGGCACTGACTCCTCGGCACTGCCTGGCAGTCCACATTACTaGATGTTCTGTATCGGATAT +
Preference number: 4 (lower is better)
Translates to: TSPSSFKQVPGTDSSALPGSPHY*MFCIGY
Trigger: ATATCCGATACAGAACATGCAGTAATGTGGACTGCC...AGGCAGTGCCGAGGAGTCAGTGCCTGGGACTTGCTTAAAACTGCTGGGACTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR GCA 90 bp TTGTGTTTTAGAGGAGAAAGTGCCTCCTTCCACATTAGCCAGCAGCCTTCATTGAGCTGGGATTTATACTaGCCTCGGACCAGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: LCFRGESASFHISQQPSLSWDLY*PRTSRQ
Trigger: CTGCCGGCTGGTCCGAGGGCAGTATAAATCCCAGCT...CAATGAAGGCTGCTGGCTAATGTGGAAGGAGGCACTTTCTCCTCTAAAACACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp TGCTGCCTCCACCACCCCGCCTTGCTAGATAAATACTACATGCCGGAGGACCTGACTTCCATAGGGAATTaGAACCACAGTATCATCCGA +
Preference number: 4 (lower is better)
Translates to: CCLHHPALLDKYYMPEDLTSIGN*NHSIIR
Trigger: TCGGATGATACTGTGGTTGCAATTCCCTATGGAAGT...CAGGTCCTCCGGCATGTAGTATTTATCTAGCAAGGCGGGGTGGTGGAGGCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp GCATTTGGGTGTTGTTACAACACAGGAATGTGGTTAGAAAGACCCTTTTGCATGCTCCACACAGGAAACTaGCCGGCTCTGGATGCCCCC +
Preference number: 4 (lower is better)
Translates to: AFGCCYNTGMWLERPFCMLHTGN*PALDAP
Trigger: GGGGGCATCCAGAGCCGGGCAGTTTCCTGTGTGGAG...CATGCAAAAGGGTCTTTCTAACCACATTCCTGTGTTGTAACAACACCCAAATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR GCA 90 bp TGGGGAAGAGGAGACAAAGGAGCAAAACACTCCTGTGTTTGTGATAGTGCGCTTCAGGAATTTCCCCGCTaGATGGGCCTGCATAACAGG +
Preference number: 4 (lower is better)
Translates to: WGRGDKGAKHSCVCDSALQEFPR*MGLHNR
Trigger: CCTGTTATGCAGGCCCATGCAGCGGGGAAATTCCTG...AAGCGCACTATCACAAACACAGGAGTGTTTTGCTCCTTTGTCTCCTCTTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp AAACACTCCTGTGTTTGTGATAGTGCGCTTCTAGGAAAGACACAGGAATTTGTCAGGTGCAGGAGCACTTaGTCTGCACCCGGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: KHSCVCDSALLGKTQEFVRCRST*SAPGSS
Trigger: GGAGGACCCGGGTGCAGAGCAAGTGCTCCTGCACCT...GACAAATTCCTGTGTCTTTCCTAGAAGCGCACTATCACAAACACAGGAGTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp CTGCCTCAGCATGGTGTCCCCTCCCCATTTGTCCTAACTGTGACTAAAGGGACAGTAGAAACCCACATCTaGTTCCACTGGTGCCAAGAT +
Preference number: 4 (lower is better)
Translates to: LPQHGVPSPFVLTVTKGTVETHI*FHWCQD
Trigger: ATCTTGGCACCAGTGGAAGCAGATGTGGGTTTCTAC...TGTCCCTTTAGTCACAGTTAGGACAAATGGGGAGGGGACACCATGCTGAGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp TCCACAGCAGCGAGATTTAAACTGGCTGAGTTGGCAGAGTTTCAGCTGTTTCACCTGCATGAGCACCCCTaGCTCATTCTGAGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: STAARFKLAELAEFQLFHLHEHP*LILSKA
Trigger: TGCCTTGCTCAGAATGAGGCAGGGGTGCTCATGCAG...GTGAAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAATCTCGCTGCTGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR GCA 90 bp TGTTTCACCTTCTCGCAGTACCTGGTGGTGTCTCTGCACTCCATGTTTTCACATAACCTGGGCCATTCATaGTCAAAATGGCCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: CFTFSQYLVVSLHSMFSHNLGHS*SKWPWP
Trigger: GGGCCAGGGCCATTTTGAGCATGAATGGCCCAGGTT...ATGTGAAAACATGGAGTGCAGAGACACCACCAGGTACTGCGAGAAGGTGAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542621.5
CDS-3UTR GCA 90 bp AGGTTCATTATCGTTTTGGTGGAGGTGTTGTTCCCTGGCTGTTTAGTGGGGCCAGGTTCACTCCTGATGTaGCTCAGAAGGACAGGCTTC +
Preference number: 4 (lower is better)
Translates to: RFIIVLVEVLFPGCLVGPGSLLM*LRRTGF
Trigger: GAAGCCTGTCCTTCTGAGGCACATCAGGAGTGAACC...TGGCCCCACTAAACAGCCAGGGAACAACACCTCCACCAAAACGATAATGAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380570.8
CDS-3UTR GCA 90 bp TTTAAACTGGCTGAGTTGGCAGAGTTTCAGCTGTTTCACCTTCTCGCAGTACCTCTAGGTGAGGCCCGATaGAAGGCCCATTGCACGAGA +
Preference number: 4 (lower is better)
Translates to: FKLAELAEFQLFHLLAVPLGEAR*KAHCTR
Trigger: TCTCGTGCAATGGGCCTTGCATCGGGCCTCACCTAG...AGGTACTGCGAGAAGGTGAAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542621.5
CDS-3UTR CCA 90 bp AGGTTCATTATCGTTTTGGTGGAGGTGTTGTTCCCTGGCTGTTTAGTGGGGCCATTGGTTGCGGAGAGCTaGGATTTATACTGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: RFIIVLVEVLFPGCLVGPLVAES*DLYCPR
Trigger: CCGAGGGCAGTATAAATCCCAGCTCTCCGCAACCAA...TGGCCCCACTAAACAGCCAGGGAACAACACCTCCACCAAAACGATAATGAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380570.8
CDS-3UTR CCA 90 bp TGGTGGGAAATCAGAGAATTGAGTTTATCTGGAGCAAATGCGACAACATTAAGCGGCCGACCAGGCCTCTaGGATGAACGAGGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: WWEIRELSLSGANATTLSGRPGL*DERGLL
Trigger: GAGGAGCCCTCGTTCATCCCAGAGGCCTGGTCGGCC...GCTTAATGTTGTCGCATTTGCTCCAGATAAACTCAATTCTCTGATTTCCCACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CCA 90 bp ATAAAGAATCATGGGACATGTGAGCAAGTCATGGGATCTCAGATCATCAGGTACGGCACGCTGGGATGCTaGCTTGGGCCCTTCACACTC +
Preference number: 4 (lower is better)
Translates to: IKNHGTCEQVMGSQIIRYGTLGC*LGPFTL
Trigger: GAGTGTGAAGGGCCCAAGCCAGCATCCCAGCGTGCC...GTACCTGATGATCTGAGATCCCATGACTTGCTCACATGTCCCATGATTCTTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CCA 90 bp CGAGCATTCTGCTTCCCACCCAAACCTAGGTTCTGCCAGCTCACTGAGACCCACACATGTGAGACTACATaGACTCCACTTGCCAATTTC +
Preference number: 4 (lower is better)
Translates to: RAFCFPPKPRFCQLTETHTCETT*TPLANF
Trigger: GAAATTGGCAAGTGGAGTCCATGTAGTCTCACATGT...GTGGGTCTCAGTGAGCTGGCAGAACCTAGGTTTGGGTGGGAAGCAGAATGCTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp GTTTGTGATAGTGCGCTTCTAGGAAAGACACAGGAATTTGTCCAATGTTTGCACGTGCTGGGCTTGGGCTaGCGACACAGCTCATCAGCC +
Preference number: 4 (lower is better)
Translates to: VCDSALLGKTQEFVQCLHVLGLG*RHSSSA
Trigger: GGCTGATGAGCTGTGTCGCCAGCCCAAGCCCAGCAC...GTGCAAACATTGGACAAATTCCTGTGTCTTTCCTAGAAGCGCACTATCACAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp GTTTGTGATAGTGCGCTTCTAGGAAAGACACAGGAATTTGTCCAATGTTTGCACGTATGTAGACCTTCCTaGCGGCCGCGATGTGCGGGC +
Preference number: 4 (lower is better)
Translates to: VCDSALLGKTQEFVQCLHVCRPS*RPRCAG
Trigger: GCCCGCACATCGCGGCCGCCAGGAAGGTCTACATAC...GTGCAAACATTGGACAAATTCCTGTGTCTTTCCTAGAAGCGCACTATCACAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp AAACACTCCTGTGTTTGTGATAGTGCGCTTCTAGGAAAGACACAGGAATTTGTCTGCACTGGCCCCAGCTaGAGAAGGCCCACTCCACAC +
Preference number: 4 (lower is better)
Translates to: KHSCVCDSALLGKTQEFVCTGPS*RRPTPH
Trigger: GTGTGGAGTGGGCCTTCTCCAGCTGGGGCCAGTGCA...GACAAATTCCTGTGTCTTTCCTAGAAGCGCACTATCACAAACACAGGAGTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp TTTAAACTGGCTGAGTTGGCAGAGTTTCAGCTGTTTCACCTTCTCGCAGTACCTTCTGACCAGCAGTTCTaGGTGCTCACAGGCCTCGGA +
Preference number: 4 (lower is better)
Translates to: FKLAELAEFQLFHLLAVPSDQQF*VLTGLG
Trigger: TCCGAGGCCTGTGAGCACCCAGAACTGCTGGTCAGA...AGGTACTGCGAGAAGGTGAAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR CCA 90 bp GCTGTTTCACCTTCTCGCAGTACCTGGTGGTGTCTCTGCACTCCATGTTTTCACCTCCATGTTTTCACATaGGGTGATGTTGCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: AVSPSRSTWWCLCTPCFHLHVFT*GDVAAL
Trigger: CAGCGCTGCAACATCACCCCATGTGAAAACATGGAG...GTGAAAACATGGAGTGCAGAGACACCACCAGGTACTGCGAGAAGGTGAAACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR CCA 90 bp TGCTGCCTCCACCACCCCGCCTTGCTAGATAAATACTACATGCCGGAGGACCTGTTAAACTGGCTGAGTTaGCAGAGTTTCAGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: CCLHHPALLDKYYMPEDLLNWLS*QSFSCF
Trigger: GAAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAA...CAGGTCCTCCGGCATGTAGTATTTATCTAGCAAGGCGGGGTGGTGGAGGCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CCA 90 bp GGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTCAGCGAGATTTAAACTaGCTGAGTTGGCAGAGTTTC +
Preference number: 4 (lower is better)
Translates to: GCVSPSCGQGRVFPHTLSQRDLN*LSWQSF
Trigger: GAAACTCTGCCAACTCAGCCAGTTTAAATCTCGCTG...AGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR CCA 90 bp TGCCTGGCCTGCTCTGCAACCTCCTTTAGACATCTGTCCTTTCCTTTCCCAACATTTGAGACCCAGGTTTaGGAGGGAGGAAGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: CLACSATSFRHLSFPFPTFETQV*EGGSSS
Trigger: TGAAGAGCTTCCTCCCTCCCAAACCTGGGTCTCAAA...TGTTGGGAAAGGAAAGGACAGATGTCTAAAGGAGGTTGCAGAGCAGGCCAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CCA 90 bp CCCTATCTTCACGCTTTGCCACAAGTTCCACAGCAGCGAGATTTAAACTGGCTGCATTCATGCTCAAAATaGCCCTGGCCCACAGCAGCA +
Preference number: 4 (lower is better)
Translates to: PYLHALPQVPQQRDLNWLHSCSK*PWPTAA
Trigger: TGCTGCTGTGGGCCAGGGCCATTTTGAGCATGAATG...CAGCCAGTTTAAATCTCGCTGCTGTGGAACTTGTGGCAAAGCGTGAAGATAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542621.5
CDS-3UTR CCA 90 bp TTGTGTTTTAGAGGAGAAAGTGCCTCCTTCCACATTAGCCAGCAGCCTTCATTGTCCCTGGCCCTTCGGTaGAGCAGCAAAGGTCCTAGA +
Preference number: 4 (lower is better)
Translates to: LCFRGESASFHISQQPSLSLALR*SSKGPR
Trigger: TCTAGGACCTTTGCTGCTCCACCGAAGGGCCAGGGA...CAATGAAGGCTGCTGGCTAATGTGGAAGGAGGCACTTTCTCCTCTAAAACACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR TCA 90 bp TCAGAACCCATGAAAGCTACAACCAGTGAGACACTGCTTTCTTTAAACAAAACAACCCCCGCAGGTGCGTaGGCATTCACTCCATGGGCC +
Preference number: 4 (lower is better)
Translates to: SEPMKATTSETLLSLNKTTPAGA*AFTPWA
Trigger: GGCCCATGGAGTGAATGCTCACGCACCTGCGGGGGT...TGTTTTGTTTAAAGAAAGCAGTGTCTCACTGGTTGTAGCTTTCATGGGTTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR TCA 90 bp AAGGCAGTTGCTTCCCCGTGCTATTTGAGGGAACATTATCTGGGGAACAATAGAGGCTTGGCACTTGAGTaGACATGGGTTGTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: KAVASPCYLREHYLGNNRGLALE*TWVVRV
Trigger: GACCCTGACAACCCATGTTCACTCAAGTGCCAAGCC...TCTATTGTTCCCCAGATAATGTTCCCTCAAATAGCACGGGGAAGCAACTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR TCA 90 bp CTATTCGTTTTGGTGCTCAAAGAAGGGTTTAGGGACCACGAGTCCCAGCAGTTTACTCTTCCACTGAAGTaGCATGCCCCTGGATGTCCT +
Preference number: 4 (lower is better)
Translates to: LFVLVLKEGFRDHESQQFTLPLK*HAPGCP
Trigger: AGGACATCCAGGGGCATGTCACTTCAGTGGAAGAGT...AAACTGCTGGGACTCGTGGTCCCTAAACCCTTCTTTGAGCACCAAAACGAATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR TCA 90 bp ACGAGTCCCAGCAGTTTTAAGCAAGTCCCAGGCACTGACTCCTCGGCACTGCCTGGGAAATCAGAGAATTaGGTTTATCTGGAGCAAATG +
Preference number: 4 (lower is better)
Translates to: TSPSSFKQVPGTDSSALPGKSEN*VYLEQM
Trigger: CATTTGCTCCAGATAAACTCAATTCTCTGATTTCCC...AGGCAGTGCCGAGGAGTCAGTGCCTGGGACTTGCTTAAAACTGCTGGGACTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR TCA 90 bp GATCTCAGATCATCAGGTACAACCAGTTCACTTTGCAGATGTGGAAACATAAAGCCTGGCTGTGCCCAGTaGGAGGTCTTGCCTGTTGGC +
Preference number: 4 (lower is better)
Translates to: DLRSSGTTSSLCRCGNIKPGCAQ*EVLPVG
Trigger: GCCAACAGGCAAGACCTCTCACTGGGCACAGCCAGG...CTTTATGTTTCCACATCTGCAAAGTGAACTGGTTGTACCTGATGATCTGAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR TCA 90 bp AGATTTAAACTGGCTGAGTTGGCAGAGTTTCAGCTGTTTCACCTTCTCGCAGTACAGGAGTACAGGCCCTaGTCCGAGGAGGACACGTTT +
Preference number: 4 (lower is better)
Translates to: RFKLAELAEFQLFHLLAVQEYRP*SEEDTF
Trigger: AAACGTGTCCTCCTCGGATCAGGGCCTGTACTCCTG...TACTGCGAGAAGGTGAAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR TCA 90 bp TTTAAACTGGCTGAGTTGGCAGAGTTTCAGCTGTTTCACCTTCTCGCAGTACCTAGGAGACGTCAGCACTaGAGGAAGGTTCGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: FKLAELAEFQLFHLLAVPRRRQH*RKVRSS
Trigger: ACTGGACCGAACCTTCCTTCAGTGCTGACGTCTCCT...AGGTACTGCGAGAAGGTGAAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR TCA 90 bp CAGCAGCGAGATTTAAACTGGCTGAGTTGGCAGAGTTTCAGCTGTTTCACCTTCATATTAGGGACAGGGTaGCCTTTGATGGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: QQRDLNWLSWQSFSCFTFILGTG*PLMGQP
Trigger: TGGCTGCCCCATCAAAGGTCACCCTGTCCCTAATAT...GAAGGTGAAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAATCTCGCTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR TCA 90 bp GTTCCACAGCAGCGAGATTTAAACTGGCTGAGTTGGCAGAGTTTCAGCTGTTTCATATTAGGGACAGGGTaGCCTTTGATGGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: VPQQRDLNWLSWQSFSCFILGTG*PLMGQP
Trigger: TGGCTGCCCCATCAAAGGTCACCCTGTCCCTAATAT...GAAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAATCTCGCTGCTGTGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR TCA 90 bp AGATTTAAACTGGCTGAGTTGGCAGAGTTTCAGCTGTTTCACCTTCTCGCAGTACCAGCTGCCAAGATGTaGTGCGTCAGTCCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: RFKLAELAEFQLFHLLAVPAAKM*CVSPVA
Trigger: TGCCACAGGACTGACGCATCACATCTTGGCAGCTGG...TACTGCGAGAAGGTGAAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR TCA 90 bp TTTGAGAAAGGAGCGGGCCAGGCTATGTTACAGTTCAGGAAGGGTATAAAAGGATCTGAGCAAGGCAGCTaGATTCCCCTTGAGACCCAC +
Preference number: 4 (lower is better)
Translates to: FEKGAGQAMLQFRKGIKGSEQGS*IPLETH
Trigger: GTGGGTCTCAAGGGGAATTCAGCTGCCTTGCTCAGA...TCCTTTTATACCCTTCCTGAACTGTAACATAGCCTGGCCCGCTCCTTTCTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380538.4
CDS-3UTR TCA 90 bp TTGTGTTTTAGAGGAGAAAGTGCCTCCTTCCACATTAGCCAGCAGCCTTCATTGTCTGAGCAAGGCAGCTaGATTCCCCTTGAGACCCAC +
Preference number: 4 (lower is better)
Translates to: LCFRGESASFHISQQPSLSEQGS*IPLETH
Trigger: GTGGGTCTCAAGGGGAATTCAGCTGCCTTGCTCAGA...CAATGAAGGCTGCTGGCTAATGTGGAAGGAGGCACTTTCTCCTCTAAAACACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR TCA 90 bp CTGTTTCACCTTCTCGCAGTACCTGGTGGTGTCTCTGCACTCCATGTTTTCACATCCCTACTGGTGATCTaGGTTCTTCTCTCTCTGCAC +
Preference number: 4 (lower is better)
Translates to: LFHLLAVPGGVSALHVFTSLLVI*VLLSLH
Trigger: GTGCAGAGAGAGAAGAACTCAGATCACCAGTAGGGA...TGTGAAAACATGGAGTGCAGAGACACCACCAGGTACTGCGAGAAGGTGAAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542621.5
CDS-3UTR TCA 90 bp CACACCCTATCTTCACGCTTTGCCACAAGTTCCACAGCAGCGAGATTTAAACTGGTGAGTGGCATTTCATaGGGGGAGGCTTATCTGTGG +
Preference number: 4 (lower is better)
Translates to: HTLSSRFATSSTAARFKLVSGIS*GEAYLW
Trigger: CCACAGATAAGCCTCCCCTCATGAAATGCCACTCAC...CAGTTTAAATCTCGCTGCTGTGGAACTTGTGGCAAAGCGTGAAGATAGGGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542621.5
CDS-3UTR TCA 90 bp ACCCTATCTTCACGCTTTGCCACAAGTTCCACAGCAGCGAGATTTAAACTGGCTGCATTTATAGCTTCTTaGATCCCCCTTCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: TLSSRFATSSTAARFKLAAFIAS*IPLPWG
Trigger: GCCCCAGGGAAGGGGGATTCAAGAAGCTATAAATGC...AGCCAGTTTAAATCTCGCTGCTGTGGAACTTGTGGCAAAGCGTGAAGATAGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR TCA 90 bp TGCCTCAGAAGGACAGGCTTCCTCTTTGGGACTGCAGCTGGTAACCTGACTTGTTCACATGCCAGAGCATaGAGCCTTCTACATTTTCAG +
Preference number: 4 (lower is better)
Translates to: CLRRTGFLFGTAAGNLTCSHARA*SLLHFQ
Trigger: CTGAAAATGTAGAAGGCTTCATGCTCTGGCATGTGA...ACAAGTCAGGTTACCAGCTGCAGTCCCAAAGAGGAAGCCTGTCCTTCTGAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380570.8
CDS-3UTR GCA 90 bp CTTGTCCCACCTAAGCTAATTCACATGCCAGAGCATGAAGCCTTCTACATTTTCCAGTGTGCCAGGAGTTaGCCGACGGCAGCATTCCAT +
Preference number: 4 (lower is better)
Translates to: LVPPKLIHMPEHEAFYIFQCARS*PTAAFH
Trigger: ATGGAATGCTGCCGTCGGGCAACTCCTGGCACACTG...GAAAATGTAGAAGGCTTCATGCTCTGGCATGTGAATTAGCTTAGGTGGGACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380570.8
CDS-3UTR GCA 90 bp CTTAGTTCAGAACCCATGAAAGCTACAACCAGTGAGACACTGCTTTCTTTAAACGTCCTCCTCGGAGCGTaGGGTCCTGGAACTCAGGAG +
Preference number: 4 (lower is better)
Translates to: LSSEPMKATTSETLLSLNVLLGA*GPGTQE
Trigger: CTCCTGAGTTCCAGGACCGCACGCTCCGAGGAGGAC...GTTTAAAGAAAGCAGTGTCTCACTGGTTGTAGCTTTCATGGGTTCTGAACTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR GCA 90 bp GAGCCAAAAAGCTTTGGTGAGATGATTACACTTAGTTCAGAACCCATGAAAGCTCCCCACCCCCGCAGGTaGGTGAGCATTCACTCCATG +
Preference number: 4 (lower is better)
Translates to: EPKSFGEMITLSSEPMKAPHPRR*VSIHSM
Trigger: CATGGAGTGAATGCTCACGCACCTGCGGGGGTGGGG...AGCTTTCATGGGTTCTGAACTAAGTGTAATCATCTCACCAAAGCTTTTTGGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR GCA 90 bp CTTAGTTCAGAACCCATGAAAGCTACAACCAGTGAGACACTGCTTTCTTTAAACCTCCACACAGGAAACTaGCCGGCTCTGGATGCCCCC +
Preference number: 4 (lower is better)
Translates to: LSSEPMKATTSETLLSLNLHTGN*PALDAP
Trigger: GGGGGCATCCAGAGCCGGGCAGTTTCCTGTGTGGAG...GTTTAAAGAAAGCAGTGTCTCACTGGTTGTAGCTTTCATGGGTTCTGAACTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR GCA 90 bp AAGGCAGTTGCTTCCCCGTGCTATTTGAGGGAACATTATCTGGGGAACAATAGATCCACTGAAGTGACATaGCCCTGGATGTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: KAVASPCYLREHYLGNNRSTEVT*PWMSSS
Trigger: GGAGGAGGACATCCAGGGGCATGTCACTTCAGTGGA...TCTATTGTTCCCCAGATAATGTTCCCTCAAATAGCACGGGGAAGCAACTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR GCA 90 bp GGGAAGGAGGCAAAAATTACTTGGCCAAAGCTGCTCGGCTTAATGAGGATTTTGGGCAGTCAAAAATGTTaGAGGGCTGCGCGATGGGCA +
Preference number: 4 (lower is better)
Translates to: GKEAKITWPKLLGLMRILGSQKC*RAARWA
Trigger: TGCCCATCGCGCAGCCCTGCAACATTTTTGACTGCC...CAAAATCCTCATTAAGCCGAGCAGCTTTGGCCAAGTAATTTTTGCCTCCTTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp TTCATTCAGCCTCAATTACCCTTGAAAGGCAGTTGCTTCCCCGTGCTATTTGAGGGCAGTCAAAAATGTTaGAGGGCTGCGCGATGGGCA +
Preference number: 4 (lower is better)
Translates to: FIQPQLPLKGSCFPVLFEGSQKC*RAARWA
Trigger: TGCCCATCGCGCAGCCCTGCAACATTTTTGACTGCC...CTCAAATAGCACGGGGAAGCAACTGCCTTTCAAGGGTAATTGAGGCTGAATGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR GCA 90 bp GATCTCAGATCATCAGGTACAACCAGTTCACTTTGCAGATGTGGAAACATAAAGCCCGCTGCATGGGCCTaGATAACAGGCACGCTGGGA +
Preference number: 4 (lower is better)
Translates to: DLRSSGTTSSLCRCGNIKPAAWA*ITGTLG
Trigger: TCCCAGCGTGCCTGTTATGCAGGCCCATGCAGCGGG...CTTTATGTTTCCACATCTGCAAAGTGAACTGGTTGTACCTGATGATCTGAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR GCA 90 bp AGCCAGCAGCCTTCATTGTCTTGTGGTGCTGCTGAGTTGCAATTCACAGAACAAGGCAGGGATCCAAATTaGAGGACTTCAGGAGCTGTG +
Preference number: 4 (lower is better)
Translates to: SQQPSLSCGAAELQFTEQGRDPN*RTSGAV
Trigger: CACAGCTCCTGAAGTCCTGCAATTTGGATCCCTGCC...TTGTTCTGTGAATTGCAACTCAGCAGCACCACAAGACAATGAAGGCTGCTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp AGATTTAAACTGGCTGAGTTGGCAGAGTTTCAGCTGTTTCACCTTCTCGCAGTAGAAGATTGGCCGCCCTaGAGGAGTACAGGCCCTGAT +
Preference number: 4 (lower is better)
Translates to: RFKLAELAEFQLFHLLAVEDWPP*RSTGPD
Trigger: ATCAGGGCCTGTACTCCTGCAGGGCGGCCAATCTTC...TACTGCGAGAAGGTGAAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR GCA 90 bp ACATTAATCATTCCTGTGGAAACCTTCCCGTCAGCAAGTCAAACTGCTGATATTTTGCACGCGATGGGCTaGACCGCAGGGCGAACCTTC +
Preference number: 4 (lower is better)
Translates to: TLIIPVETFPSASQTADILHAMG*TAGRTF
Trigger: GAAGGTTCGCCCTGCGGTGCAGCCCATCGCGTGCAA...AATATCAGCAGTTTGACTTGCTGACGGGAAGGTTTCCACAGGAATGATTAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380538.4
CDS-3UTR GCA 90 bp GTTTGTGATAGTGCGCTTCTAGGAAAGACACAGGAATTTGTCCAATGTTTGCACCAGGTGCTCAGGCACTaGCTTGTTGGTGCGGGCATG +
Preference number: 4 (lower is better)
Translates to: VCDSALLGKTQEFVQCLHQVLRH*LVGAGM
Trigger: CATGCCCGCACCAACAAGGCAGTGCCTGAGCACCTG...GTGCAAACATTGGACAAATTCCTGTGTCTTTCCTAGAAGCGCACTATCACAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp CCACAGCAGCGAGATTTAAACTGGCTGAGTTGGCAGAGTTTCAGCTGTTTCACCCCTATCTTCACGCTTTaGCACAAGTTCCACAGCAGC +
Preference number: 4 (lower is better)
Translates to: PQQRDLNWLSWQSFSCFTPIFTL*HKFHSS
Trigger: GCTGCTGTGGAACTTGTGGCAAAGCGTGAAGATAGG...GGTGAAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAATCTCGCTGCTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR GCA 90 bp AGCCAGCAGCCTTCATTGTCTTGTGGTGCTGCTGAGTTGCAATTCACAGAACAAACTGTCTGCCTGGCCTaGTCTGCAACCTCCTTTAGA +
Preference number: 4 (lower is better)
Translates to: SQQPSLSCGAAELQFTEQTVCLA*SATSFR
Trigger: TCTAAAGGAGGTTGCAGAGCAGGCCAGGCAGACAGT...TTGTTCTGTGAATTGCAACTCAGCAGCACCACAAGACAATGAAGGCTGCTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp TTTAAACTGGCTGAGTTGGCAGAGTTTCAGCTGTTTCACCTTCTCGCAGTACCTCTGAGCATGCGCACATaGATGGGATCAGAGCTGGTC +
Preference number: 4 (lower is better)
Translates to: FKLAELAEFQLFHLLAVPLSMRT*MGSELV
Trigger: GACCAGCTCTGATCCCATGCATGTGCGCATGCTCAG...AGGTACTGCGAGAAGGTGAAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542621.5
CDS-3UTR GCA 90 bp CAGCAGCGAGATTTAAACTGGCTGAGTTGGCAGAGTTTCAGCTGTTTCACCTTCCAGGCTGGCTGGAAATaGAGCCCTGATGTCAATGGT +
Preference number: 4 (lower is better)
Translates to: QQRDLNWLSWQSFSCFTFQAGWK*SPDVNG
Trigger: ACCATTGACATCAGGGCTGCATTTCCAGCCAGCCTG...GAAGGTGAAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAATCTCGCTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542621.5
CDS-3UTR GCA 90 bp GCTCAGGGTACCCGGTGGGGCCATGATGATGAGAGGGAAGAGTGGACTTACTCTTACGATTTTCCTTTCTaGATTAGCAGTCAGGAAACC +
Preference number: 4 (lower is better)
Translates to: AQGTRWGHDDEREEWTYSYDFPF*ISSQET
Trigger: GGTTTCCTGACTGCTAATGCAGAAAGGAAAATCGTA...AGAGTAAGTCCACTCTTCCCTCTCATCATCATGGCCCCACCGGGTACCCTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR GCA 90 bp TTCATTCAGCCTCAATTACCCTTGAAAGGCAGTTGCTTCCCCGTGCTATTTGAGGTCACAGCTCTGATCTaGTGCCATGAAGCCACAGGG +
Preference number: 4 (lower is better)
Translates to: FIQPQLPLKGSCFPVLFEVTALI*CHEATG
Trigger: CCCTGTGGCTTCATGGCAGCAGATCAGAGCTGTGAC...CTCAAATAGCACGGGGAAGCAACTGCCTTTCAAGGGTAATTGAGGCTGAATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR CCA 90 bp GCATTTGGGTGTTGTTACAACACAGGAATGTGGTTAGAAAGACCCTTTTGCATGCGGAGCGTGCGGTCCTaGAACTCAGGAGCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: AFGCCYNTGMWLERPFCMRSVRS*NSGAGK
Trigger: CTTTCCTGCTCCTGAGTTCCAGGACCGCACGCTCCG...CATGCAAAAGGGTCTTTCTAACCACATTCCTGTGTTGTAACAACACCCAAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CCA 90 bp TGCCTGGCCTGCTCTGCAACCTCCTTTAGACATCTGTCCTTTCCTTTCCCAACAGAAATCACCTGCTTCTaGTGGGCAGTCCACATTACT +
Preference number: 4 (lower is better)
Translates to: CLACSATSFRHLSFPFPTEITCF*WAVHIT
Trigger: AGTAATGTGGACTGCCCACCAGAAGCAGGTGATTTC...TGTTGGGAAAGGAAAGGACAGATGTCTAAAGGAGGTTGCAGAGCAGGCCAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp TGGGGAAGAGGAGACAAAGGAGCAAAACACTCCTGTGTTTGTGATAGTGCGCTTTTGGTTGCGGAGAGCTaGGATTTATACTGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: WGRGDKGAKHSCVCDSALLVAES*DLYCPR
Trigger: CCGAGGGCAGTATAAATCCCAGCTCTCCGCAACCAA...AAGCGCACTATCACAAACACAGGAGTGTTTTGCTCCTTTGTCTCCTCTTCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp ACTGAAAGAGAAAACACGCGGACGTCCTTATGCTTGAAGGTGGAGGTGGAGGAGCAGTATCATCCGATTTaGTTGCGGAGAGCTGGGATT +
Preference number: 4 (lower is better)
Translates to: TERENTRTSLCLKVEVEEQYHPI*LRRAGI
Trigger: AATCCCAGCTCTCCGCAACCAAATCGGATGATACTG...CTCCTCCACCTCCACCTTCAAGCATAAGGACGTCCGCGTGTTTTCTCTTTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp GCAAAAATTACTTGGCCAAAGCTGCTCGGCTTAATGAGGATTTTGCCGAAGAGTGCTGGGATGCTGGCTTaGGCCCTTCACACTCGTCAA +
Preference number: 4 (lower is better)
Translates to: AKITWPKLLGLMRILPKSAGMLA*ALHTRQ
Trigger: TTGACGAGTGTGAAGGGCCCAAGCCAGCATCCCAGC...ACTCTTCGGCAAAATCCTCATTAAGCCGAGCAGCTTTGGCCAAGTAATTTTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp ACTGAAAGAGAAAACACGCGGACGTCCTTATGCTTGAAGGTGGAGGTGGAGGAGAATTTCCCACCTTGCTaGGCAGGGATCCAAATTGCA +
Preference number: 4 (lower is better)
Translates to: TERENTRTSLCLKVEVEENFPPC*AGIQIA
Trigger: TGCAATTTGGATCCCTGCCCAGCAAGGTGGGAAATT...CTCCTCCACCTCCACCTTCAAGCATAAGGACGTCCGCGTGTTTTCTCTTTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp CACACCCTATCTTCACGCTTTGCCACAAGTTCCACAGCAGCGAGATTTAAACTGTCTAGGATCAGCAGCTaGGTGCTCTCAGTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: HTLSSRFATSSTAARFKLSRISS*VLSVSS
Trigger: AGAGCTGACTGAGAGCACCCAGCTGCTGATCCTAGA...CAGTTTAAATCTCGCTGCTGTGGAACTTGTGGCAAAGCGTGAAGATAGGGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR CCA 90 bp AGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTTCACGCTTTTGTGGCAGTGACAATTaGCTGACCACCATGAAACCA +
Preference number: 4 (lower is better)
Translates to: SPSCGQGRVFPHTLSSRFCGSDN*LTTMKP
Trigger: TGGTTTCATGGTGGTCAGCCAATTGTCACTGCCACA...AAAGCGTGAAGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR CCA 90 bp GGAATTTGTCCAATGTTTGCACCAATAGGCTACAAACCTTCTGGCTCCCTGCTGCATTGGACACAGGGGTaGAGATCCCAGAGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: GICPMFAPIGYKPSGSLLHWTQG*RSQRLS
Trigger: TGAAAGCCTCTGGGATCTCCACCCCTGTGTCCAATG...CAGCAGGGAGCCAGAAGGTTTGTAGCCTATTGGTGCAAACATTGGACAAATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp GTTTGTGATAGTGCGCTTCTAGGAAAGACACAGGAATTTGTCCAATGTTTGCACGGCCGCTTGGCGACCTaGGTGCACATGTCATTGGAC +
Preference number: 4 (lower is better)
Translates to: VCDSALLGKTQEFVQCLHGRLAT*VHMSLD
Trigger: GTCCAATGACATGTGCACCCAGGTCGCCAAGCGGCC...GTGCAAACATTGGACAAATTCCTGTGTCTTTCCTAGAAGCGCACTATCACAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp ATGAAGAGGTTGCTACAACCTGACAGCCTGACAGATACTCTCTGGCACAGTGACCTCCATGTTTTCACATaGGGTGATGTTGCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: MKRLLQPDSLTDTLWHSDLHVFT*GDVAAL
Trigger: CAGCGCTGCAACATCACCCCATGTGAAAACATGGAG...GTCACTGTGCCAGAGAGTATCTGTCAGGCTGTCAGGTTGTAGCAACCTCTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CCA 90 bp GGAATTTGTCCAATGTTTGCACCAATAGGCTACAAACCTTCTGGCTCCCTGCTGTCTCGCAGTACCTGGTaGTGTCTCTGCACTCCATGT +
Preference number: 4 (lower is better)
Translates to: GICPMFAPIGYKPSGSLLSRSTW*CLCTPC
Trigger: ACATGGAGTGCAGAGACACCACCAGGTACTGCGAGA...CAGCAGGGAGCCAGAAGGTTTGTAGCCTATTGGTGCAAACATTGGACAAATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CCA 90 bp GGCAGAGTTTCAGCTGTTTCACCTTCTCGCAGTACCTGGTGGTGTCTCTGCACTCAGCGAGATTTAAACTaGCTGAGTTGGCAGAGTTTC +
Preference number: 4 (lower is better)
Translates to: GRVSAVSPSRSTWWCLCTQRDLN*LSWQSF
Trigger: GAAACTCTGCCAACTCAGCCAGTTTAAATCTCGCTG...AGTGCAGAGACACCACCAGGTACTGCGAGAAGGTGAAACAGCTGAAACTCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR CCA 90 bp TGGGGAAGAGGAGACAAAGGAGCAAAACACTCCTGTGTTTGTGATAGTGCGCTTTTGACTCTGATAGCTTaGGAAGTGGGGACTCCCACG +
Preference number: 4 (lower is better)
Translates to: WGRGDKGAKHSCVCDSALLTLIA*EVGTPT
Trigger: CGTGGGAGTCCCCACTTCCCAAGCTATCAGAGTCAA...AAGCGCACTATCACAAACACAGGAGTGTTTTGCTCCTTTGTCTCCTCTTCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CCA 90 bp GGAATTTGTCCAATGTTTGCACCAATAGGCTACAAACCTTCTGGCTCCCTGCTGTTGACTCTGATAGCTTaGGAAGTGGGGACTCCCACG +
Preference number: 4 (lower is better)
Translates to: GICPMFAPIGYKPSGSLLLTLIA*EVGTPT
Trigger: CGTGGGAGTCCCCACTTCCCAAGCTATCAGAGTCAA...CAGCAGGGAGCCAGAAGGTTTGTAGCCTATTGGTGCAAACATTGGACAAATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CCA 90 bp TTTCAGGTTCATTATCGTTTTGGTGGAGGTGTTGTTCCCTGGCTGTTTAGTGGGGGAGGTGTTGTTCCCTaGCTGTTTAGTGGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: FQVHYRFGGGVVPWLFSGGGVVP*LFSGAR
Trigger: TCTGGCCCCACTAAACAGCCAGGGAACAACACCTCC...CCCACTAAACAGCCAGGGAACAACACCTCCACCAAAACGATAATGAACCTGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380570.8
CDS-3UTR CCA 90 bp AGCCCCATGTCTGGTTCACTCCTGATGTGCCTCAGAAGGACAGGCTTCCTCTTTGGTTCATTATCGTTTTaGTGGAGGTGTTGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: SPMSGSLLMCLRRTGFLFGSLSF*WRCCSL
Trigger: CAGGGAACAACACCTCCACCAAAACGATAATGAACC...AAAGAGGAAGCCTGTCCTTCTGAGGCACATCAGGAGTGAACCAGACATGGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380570.8
3UTR CAA 72 bp GCACTGACTCCTCGGCACTGCCTCAGCATTTGGGTGTaGTTACAACACAGGAATGTGGTTAGAAAGACCCTT +
Preference number: 4 (lower is better)
Translates to: ALTPRHCLSIWV*LQHRNVVRKTL
Trigger: AAGGGTCTTTCTAACCACATTCCTGTGTTGTAACAACACCCAAATGCTGAGGCAGTGCCGAGGAGTCAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR TCA 90 bp ATGAAGAGGTTGCTACAACCTGACAGCCTGACAGATACTCTCTGGCACAGTGACGACATCATTATGAGCTaGGCATTGCTGAGCTCGGAA +
Preference number: 4 (lower is better)
Translates to: MKRLLQPDSLTDTLWHSDDIIMS*ALLSSE
Trigger: TTCCGAGCTCAGCAATGCTCAGCTCATAATGATGTC...GTCACTGTGCCAGAGAGTATCTGTCAGGCTGTCAGGTTGTAGCAACCTCTTCAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR TCA 90 bp CTATTCGTTTTGGTGCTCAAAGAAGGGTTTAGGGACCACGAGTCCCAGCAGTTTACTGGCCATGGTGCTTaGCATCATTATGAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: LFVLVLKEGFRDHESQQFTGHGA*HHYELS
Trigger: GCTCAGCTCATAATGATGTCAAGCACCATGGCCAGT...AAACTGCTGGGACTCGTGGTCCCTAAACCCTTCTTTGAGCACCAAAACGAATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR TCA 90 bp CTATTCGTTTTGGTGCTCAAAGAAGGGTTTAGGGACCACGAGTCCCAGCAGTTTCTTTGGCTTGGCACTTaGGTGAACATGGGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: LFVLVLKEGFRDHESQQFLWLGT*VNMGCQ
Trigger: CTGACAACCCATGTTCACTCAAGTGCCAAGCCAAAG...AAACTGCTGGGACTCGTGGTCCCTAAACCCTTCTTTGAGCACCAAAACGAATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR TCA 90 bp CAGATGCCCAATGTAGATTGCACCTCTAATGGTTCCCCATGTCTGGTAGCATGTCTTTGGCTTGGCACTTaGGTGAACATGGGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: QMPNVDCTSNGSPCLVACLWLGT*VNMGCQ
Trigger: CTGACAACCCATGTTCACTCAAGTGCCAAGCCAAAG...ACATGCTACCAGACATGGGGAACCATTAGAGGTGCAATCTACATTGGGCATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR TCA 90 bp GAGTGGCATTTCATGAGGGGAGGCTTATCTGTGGGTAAGGGACTCTGGCCACCCTTTGGCATAAACCACTaGTGCACATATCCAAAGATT +
Preference number: 4 (lower is better)
Translates to: EWHFMRGGLSVGKGLWPPFGINH*CTYPKI
Trigger: AATCTTTGGATATGTGCATCAGTGGTTTATGCCAAA...GGGTGGCCAGAGTCCCTTACCCACAGATAAGCCTCCCCTCATGAAATGCCACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR TCA 90 bp TTGTGTTTTAGAGGAGAAAGTGCCTCCTTCCACATTAGCCAGCAGCCTTCATTGCACAGTTATCTTCCTTaGCGGTGCTTCCCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: LCFRGESASFHISQQPSLHSYLP*RCFPAG
Trigger: ACCAGCTGGGAAGCACCGTCAAGGAAGATAACTGTG...CAATGAAGGCTGCTGGCTAATGTGGAAGGAGGCACTTTCTCCTCTAAAACACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR TCA 90 bp CCTCAATTACCCTTGAAAGGCAGTTGCTTCCCCGTGCTATTTGAGGGAACATTACACAGTTATCTTCCTTaGCGGTGCTTCCCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: PQLPLKGSCFPVLFEGTLHSYLP*RCFPAG
Trigger: ACCAGCTGGGAAGCACCGTCAAGGAAGATAACTGTG...TAATGTTCCCTCAAATAGCACGGGGAAGCAACTGCCTTTCAAGGGTAATTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR TCA 90 bp CTTAGTTCAGAACCCATGAAAGCTACAACCAGTGAGACACTGCTTTCTTTAAACGGACCACACGGTATCTaGGGCCCTGGCCACATGTCA +
Preference number: 4 (lower is better)
Translates to: LSSEPMKATTSETLLSLNGPHGI*GPGHMS
Trigger: TGACATGTGGCCAGGGCCTCAGATACCGTGTGGTCC...GTTTAAAGAAAGCAGTGTCTCACTGGTTGTAGCTTTCATGGGTTCTGAACTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR TCA 90 bp AGCCAGCAGCCTTCATTGTCTTGTGGTGCTGCTGAGTTGCAATTCACAGAACAAGCTCTTGAGCTTGTTTaGACCATGGCAACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: SQQPSLSCGAAELQFTEQALELV*TMATWP
Trigger: AGGCCAAGTTGCCATGGTTCAAACAAGCTCAAGAGC...TTGTTCTGTGAATTGCAACTCAGCAGCACCACAAGACAATGAAGGCTGCTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR TCA 90 bp TCAACAACTGTTCTTGTCTGTGAGTCAACAAAAGGGTCACAGGATAACCTAACCGAACGAGGGCTCCTCTaGCACAGCAGCTCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: STTVLVCESTKGSQDNLTERGLL*HSSSFF
Trigger: GAAGAAGGAGCTGCTGTGTCAGAGGAGCCCTCGTTC...GGTTAGGTTATCCTGTGACCCTTTTGTTGACTCACAGACAAGAACAGTTGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR TCA 90 bp GCATTTGGGTGTTGTTACAACACAGGAATGTGGTTAGAAAGACCCTTTTGCATGAGGTCAGCCACGGACTaGGAGAAAGACAGGAGCACC +
Preference number: 4 (lower is better)
Translates to: AFGCCYNTGMWLERPFCMRSATD*EKDRST
Trigger: GGTGCTCCTGTCTTTCTCTCAGTCCGTGGCTGACCT...CATGCAAAAGGGTCTTTCTAACCACATTCCTGTGTTGTAACAACACCCAAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR TCA 90 bp AGCCAGCAGCCTTCATTGTCTTGTGGTGCTGCTGAGTTGCAATTCACAGAACAAGGAATTGACAACCGTTaGGAGGCCGGTTTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: SQQPSLSCGAAELQFTEQGIDNR*EAGFQH
Trigger: ATGCTGAAAACCGGCCTCTCAACGGTTGTCAATTCC...TTGTTCTGTGAATTGCAACTCAGCAGCACCACAAGACAATGAAGGCTGCTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR TCA 90 bp GAAAGGAGCGGGCCAGGCTATGTTACAGTTCAGGAAGGGTATAAAAGGACATTAATATTAGGGACAGGGTaGCCTTTGATGGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: ERSGPGYVTVQEGYKRTLILGTG*PLMGQP
Trigger: TGGCTGCCCCATCAAAGGTCACCCTGTCCCTAATAT...TAATGTCCTTTTATACCCTTCCTGAACTGTAACATAGCCTGGCCCGCTCCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380538.4
CDS-3UTR TCA 90 bp TTTGAGAAAGGAGCGGGCCAGGCTATGTTACAGTTCAGGAAGGGTATAAAAGGACAGCTGAATTCCCCTTaGGACCCACCGCTAAGGTTT +
Preference number: 4 (lower is better)
Translates to: FEKGAGQAMLQFRKGIKGQLNSP*DPPLRF
Trigger: AAACCTTAGCGGTGGGTCTCAAGGGGAATTCAGCTG...TCCTTTTATACCCTTCCTGAACTGTAACATAGCCTGGCCCGCTCCTTTCTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380538.4
CDS-3UTR TCA 90 bp GGGAAGGAGGCAAAAATTACTTGGCCAAAGCTGCTCGGCTTAATGAGGATTTTGAAGATGCCTTCTGCATaGGCACCCCTGCCTCATTCT +
Preference number: 4 (lower is better)
Translates to: GKEAKITWPKLLGLMRILKMPSA*APLPHS
Trigger: AGAATGAGGCAGGGGTGCTCATGCAGAAGGCATCTT...CAAAATCCTCATTAAGCCGAGCAGCTTTGGCCAAGTAATTTTTGCCTCCTTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR TCA 90 bp TGTCCACAGCTCACTAGGTGGGGACACAGATTAATATTGTCTTCCTCTCAAATTGAGGCTTTCAGCTTTTaGCAGGTCACCCTGCGGGTC +
Preference number: 4 (lower is better)
Translates to: CPQLTRWGHRLILSSSQIEAFSF*QVTLRV
Trigger: GACCCGCAGGGTGACCTGTCAAAAGCTGAAAGCCTC...AATTTGAGAGGAAGACAATATTAATCTGTGTCCCCACCTAGTGAGCTGTGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR TCA 90 bp GTTCCACAGCAGCGAGATTTAAACTGGCTGAGTTGGCAGAGTTTCAGCTGTTTCACCTCTCCCTACTGGTaGTCTGAGTTCTTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: VPQQRDLNWLSWQSFSCFTSPYW*SEFFSL
Trigger: GAGAGAGAAGAACTCAGATCACCAGTAGGGAGAGGT...GAAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAATCTCGCTGCTGTGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542621.5
CDS-3UTR TCA 90 bp TGGGGAAGAGGAGACAAAGGAGCAAAACACTCCTGTGTTTGTGATAGTGCGCTTGAGGTTGCTACAACCTaGCAGCCTGACAGATACTCT +
Preference number: 4 (lower is better)
Translates to: WGRGDKGAKHSCVCDSALEVATT*QPDRYS
Trigger: AGAGTATCTGTCAGGCTGTCAGGTTGTAGCAACCTC...AAGCGCACTATCACAAACACAGGAGTGTTTTGCTCCTTTGTCTCCTCTTCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR TCA 90 bp CCTCAATTACCCTTGAAAGGCAGTTGCTTCCCCGTGCTATTTGAGGGAACATTAGTCTTTTGTCATTTCTaGGGCGGAGGGCACAATGGC +
Preference number: 4 (lower is better)
Translates to: PQLPLKGSCFPVLFEGTLVFCHF*GGGHNG
Trigger: GCCATTGTGCCCTCCGCCTCAGAAATGACAAAAGAC...TAATGTTCCCTCAAATAGCACGGGGAAGCAACTGCCTTTCAAGGGTAATTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR GCA 90 bp CTTAGTTCAGAACCCATGAAAGCTACAACCAGTGAGACACTGCTTTCTTTAAACGAAAGAGGAGCAGTGTaGCAGGAGTTGCCCGACGGC +
Preference number: 4 (lower is better)
Translates to: LSSEPMKATTSETLLSLNERGAV*QELPDG
Trigger: GCCGTCGGGCAACTCCTGGCACACTGCTCCTCTTTC...GTTTAAAGAAAGCAGTGTCTCACTGGTTGTAGCTTTCATGGGTTCTGAACTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR GCA 90 bp GAGATGATTACACTTAGTTCAGAACCCATGAAAGCTACAACCAGTGAGACACTGCTTCACAGCTCTTGCTaGTCAGGCAGCGCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: EMITLSSEPMKATTSETLLHSSC*SGSASE
Trigger: CTCTGAGGCGCTGCCTGAGCAGCAAGAGCTGTGAAG...CAGTGTCTCACTGGTTGTAGCTTTCATGGGTTCTGAACTAAGTGTAATCATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR GCA 90 bp TGTCCACAGCTCACTAGGTGGGGACACAGATTAATATTGTCTTCCTCTCAAATTCTTCACAGCTCTTGCTaGTCAGGCAGCGCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: CPQLTRWGHRLILSSSQILHSSC*SGSASE
Trigger: CTCTGAGGCGCTGCCTGAGCAGCAAGAGCTGTGAAG...AATTTGAGAGGAAGACAATATTAATCTGTGTCCCCACCTAGTGAGCTGTGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp TTTGTCATTTCTGAGGCGGAGGGCACAATGGCTTATTTCATCTTTCTGTTTCCTAGCTGGGATTTATACTaGCCTCGGACCAGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: FVISEAEGTMAYFIFLFPSWDLY*PRTSRQ
Trigger: CTGCCGGCTGGTCCGAGGGCAGTATAAATCCCAGCT...AGGAAACAGAAAGATGAAATAAGCCATTGTGCCCTCCGCCTCAGAAATGACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR GCA 90 bp CCTCAATTACCCTTGAAAGGCAGTTGCTTCCCCGTGCTATTTGAGGGAACATTACAGCAACCACACGGTTaGTCCTCAGATCGTAGCACT +
Preference number: 4 (lower is better)
Translates to: PQLPLKGSCFPVLFEGTLQQPHG*SSDRST
Trigger: AGTGCTACGATCTGAGGAGCAACCGTGTGGTTGCTG...TAATGTTCCCTCAAATAGCACGGGGAAGCAACTGCCTTTCAAGGGTAATTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR GCA 90 bp AAGGCAGTTGCTTCCCCGTGCTATTTGAGGGAACATTATCTGGGGAACAATAGAAAAATGTTGCAGGGCTaGGCGATGGGCATCTTAGGG +
Preference number: 4 (lower is better)
Translates to: KAVASPCYLREHYLGNNRKMLQG*AMGILG
Trigger: CCCTAAGATGCCCATCGCGCAGCCCTGCAACATTTT...TCTATTGTTCCCCAGATAATGTTCCCTCAAATAGCACGGGGAAGCAACTGCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR GCA 90 bp GTCCCACCTAAGCTAATTCACATGCCAGAGCATGAAGCCTTCTACATTTTCAGGGACGGCAGCATTCCATaGTTGGATCCTTGCCGGAAT +
Preference number: 4 (lower is better)
Translates to: VPPKLIHMPEHEAFYIFRDGSIP*LDPCRN
Trigger: ATTCCGGCAAGGATCCAAGCATGGAATGCTGCCGTC...CCTGAAAATGTAGAAGGCTTCATGCTCTGGCATGTGAATTAGCTTAGGTGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380570.8
CDS-3UTR GCA 90 bp GGAATTTGTCCAATGTTTGCACCAATAGGCTACAAACCTTCTGGCTCCCTGCTGGCCAATTTCCCACCTTaGTGGGCAGGGATCCAAATT +
Preference number: 4 (lower is better)
Translates to: GICPMFAPIGYKPSGSLLANFPP*WAGIQI
Trigger: AATTTGGATCCCTGCCCAGCAAGGTGGGAAATTGGC...CAGCAGGGAGCCAGAAGGTTTGTAGCCTATTGGTGCAAACATTGGACAAATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp ACAAACATTAAATGTACATTCATTTCATGCAACGAGCATTCTGCTTCCCACCCAGCAGGATGGTGGGCTTaGGGTGTGGCCTTCGAGAGC +
Preference number: 4 (lower is better)
Translates to: TNIKCTFISCNEHSASHPAGWWA*GVAFES
Trigger: GCTCTCGAAGGCCACACCGCAAGCCCACCATCCTGC...TGGGTGGGAAGCAGAATGCTCGTTGCATGAAATGAATGTACATTTAATGTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp GGGAAGGAGGCAAAAATTACTTGGCCAAAGCTGCTCGGCTTAATGAGGATTTTGCCGATGGCCTCACAGTaGAGAAGAACACTCAGTGTC +
Preference number: 4 (lower is better)
Translates to: GKEAKITWPKLLGLMRILPMASQ*RRTLSV
Trigger: GACACTGAGTGTTCTTCTGCACTGTGAGGCCATCGG...CAAAATCCTCATTAAGCCGAGCAGCTTTGGCCAAGTAATTTTTGCCTCCTTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp ACCCTATCTTCACGCTTTGCCACAAGTTCCACAGCAGCGAGATTTAAACTGGCTCCCACCGCTAAGGTTTaGAACTTGAAGGATCTGTCC +
Preference number: 4 (lower is better)
Translates to: TLSSRFATSSTAARFKLAPTAKV*NLKDLS
Trigger: GGACAGATCCTTCAAGTTGCAAACCTTAGCGGTGGG...AGCCAGTTTAAATCTCGCTGCTGTGGAACTTGTGGCAAAGCGTGAAGATAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR GCA 90 bp CACACCCTATCTTCACGCTTTGCCACAAGTTCCACAGCAGCGAGATTTAAACTGGGAAGAGCACTGCACTaGTCTGATGGTAAGGTGATG +
Preference number: 4 (lower is better)
Translates to: HTLSSRFATSSTAARFKLGRALH*SDGKVM
Trigger: CATCACCTTACCATCAGAGCAGTGCAGTGCTCTTCC...CAGTTTAAATCTCGCTGCTGTGGAACTTGTGGCAAAGCGTGAAGATAGGGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR GCA 90 bp TGTTTCACCTTCTCGCAGTACCTGGTGGTGTCTCTGCACTCCATGTTTTCACATCCTATCTTCACGCTTTaGCACAAGTTCCACAGCAGC +
Preference number: 4 (lower is better)
Translates to: CFTFSQYLVVSLHSMFSHPIFTL*HKFHSS
Trigger: GCTGCTGTGGAACTTGTGGCAAAGCGTGAAGATAGG...ATGTGAAAACATGGAGTGCAGAGACACCACCAGGTACTGCGAGAAGGTGAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR GCA 90 bp GTTTGTGATAGTGCGCTTCTAGGAAAGACACAGGAATTTGTCCAATGTTTGCACTCTGTCCGAGGTGGTTaGGTGAGTCCTTCGTGTGGC +
Preference number: 4 (lower is better)
Translates to: VCDSALLGKTQEFVQCLHSVRGG*VSPSCG
Trigger: GCCACACGAAGGACTCACGCAACCACCTCGGACAGA...GTGCAAACATTGGACAAATTCCTGTGTCTTTCCTAGAAGCGCACTATCACAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp AAACACTCCTGTGTTTGTGATAGTGCGCTTCTAGGAAAGACACAGGAATTTGTCTCTGTCCGAGGTGGTTaGGTGAGTCCTTCGTGTGGC +
Preference number: 4 (lower is better)
Translates to: KHSCVCDSALLGKTQEFVSVRGG*VSPSCG
Trigger: GCCACACGAAGGACTCACGCAACCACCTCGGACAGA...GACAAATTCCTGTGTCTTTCCTAGAAGCGCACTATCACAAACACAGGAGTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp GGTTCACTCCTGATGTGCCTCAGAAGGACAGGCTTCCTCTTTGGGACTGCAGCTTGTCTTACATTTGGTTaGGGAGAGCTGGGATTTATA +
Preference number: 4 (lower is better)
Translates to: GSLLMCLRRTGFLFGTAACLTFG*GELGFI
Trigger: TATAAATCCCAGCTCTCCGCAACCAAATGTAAGACA...AGCTGCAGTCCCAAAGAGGAAGCCTGTCCTTCTGAGGCACATCAGGAGTGAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380570.8
CDS-3UTR CCA 90 bp GAGCCAAAAAGCTTTGGTGAGATGATTACACTTAGTTCAGAACCCATGAAAGCTCGGAGCGTGCGGTCCTaGAACTCAGGAGCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: EPKSFGEMITLSSEPMKARSVRS*NSGAGK
Trigger: CTTTCCTGCTCCTGAGTTCCAGGACCGCACGCTCCG...AGCTTTCATGGGTTCTGAACTAAGTGTAATCATCTCACCAAAGCTTTTTGGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR CCA 90 bp GCTCTATCATCAAAGCAGCTTTTACAGATTCGGGATCATTCATTCAGCCTCAATCGGAGCGTGCGGTCCTaGAACTCAGGAGCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: ALSSKQLLQIRDHSFSLNRSVRS*NSGAGK
Trigger: CTTTCCTGCTCCTGAGTTCCAGGACCGCACGCTCCG...ATTGAGGCTGAATGAATGATCCCGAATCTGTAAAAGCTGCTTTGATGATAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR CCA 90 bp GTTCATTATCGTTTTGGTGGAGGTGTTGTTCCCTGGCTGTTTAGTGGGGCCAGAGTTGTTCCTTTGGCTTaGCACTTGAGTGAACATGGG +
Preference number: 4 (lower is better)
Translates to: VHYRFGGGVVPWLFSGARVVPLA*HLSEHG
Trigger: CCCATGTTCACTCAAGTGCCAAGCCAAAGGAACAAC...TCTGGCCCCACTAAACAGCCAGGGAACAACACCTCCACCAAAACGATAATGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380570.8
CDS-3UTR CCA 90 bp TTCATTCAGCCTCAATTACCCTTGAAAGGCAGTTGCTTCCCCGTGCTATTTGAGTTGGTTGCGGAGAGCTaGGATTTATACTGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: FIQPQLPLKGSCFPVLFELVAES*DLYCPR
Trigger: CCGAGGGCAGTATAAATCCCAGCTCTCCGCAACCAA...CTCAAATAGCACGGGGAAGCAACTGCCTTTCAAGGGTAATTGAGGCTGAATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR CCA 90 bp TTGTGTTTTAGAGGAGAAAGTGCCTCCTTCCACATTAGCCAGCAGCCTTCATTGAAAGACAGGAGCACCTaGCACCTGACTATTCGCACC +
Preference number: 4 (lower is better)
Translates to: LCFRGESASFHISQQPSLKDRST*HLTIRT
Trigger: GGTGCGAATAGTCAGGTGCCAGGTGCTCCTGTCTTT...CAATGAAGGCTGCTGGCTAATGTGGAAGGAGGCACTTTCTCCTCTAAAACACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp CCACAGCAGCGAGATTTAAACTGGCTGAGTTGGCAGAGTTTCAGCTGTTTCACCTGTGGCAGTGACAATTaGCTGACCACCATGAAACCA +
Preference number: 4 (lower is better)
Translates to: PQQRDLNWLSWQSFSCFTCGSDN*LTTMKP
Trigger: TGGTTTCATGGTGGTCAGCCAATTGTCACTGCCACA...GGTGAAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAATCTCGCTGCTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR CCA 90 bp TGTCCACAGCTCACTAGGTGGGGACACAGATTAATATTGTCTTCCTCTCAAATTCAGGCACTGCCTTGTTaGTGCGGGCATGCACACACT +
Preference number: 4 (lower is better)
Translates to: CPQLTRWGHRLILSSSQIQALPC*CGHAHT
Trigger: AGTGTGTGCATGCCCGCACCAACAAGGCAGTGCCTG...AATTTGAGAGGAAGACAATATTAATCTGTGTCCCCACCTAGTGAGCTGTGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CCA 90 bp TGTTTCACCTTCTCGCAGTACCTGGTGGTGTCTCTGCACTCCATGTTTTCACATCTCCATGTTTTCACATaGGGTGATGTTGCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: CFTFSQYLVVSLHSMFSHLHVFT*GDVAAL
Trigger: CAGCGCTGCAACATCACCCCATGTGAAAACATGGAG...ATGTGAAAACATGGAGTGCAGAGACACCACCAGGTACTGCGAGAAGGTGAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR CCA 90 bp AGATTTAAACTGGCTGAGTTGGCAGAGTTTCAGCTGTTTCACCTTCTCGCAGTACCTTCTCGCAGTACCTaGTGGTGTCTCTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: RFKLAELAEFQLFHLLAVPSRST*WCLCTP
Trigger: TGGAGTGCAGAGACACCACCAGGTACTGCGAGAAGG...TACTGCGAGAAGGTGAAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR CCA 90 bp GGCAGAGTTTCAGCTGTTTCACCTTCTCGCAGTACCTGGTGGTGTCTCTGCACTTTAAACTGGCTGAGTTaGCAGAGTTTCAGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: GRVSAVSPSRSTWWCLCTLNWLS*QSFSCF
Trigger: GAAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAA...AGTGCAGAGACACCACCAGGTACTGCGAGAAGGTGAAACAGCTGAAACTCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR CCA 90 bp CACACCCTATCTTCACGCTTTGCCACAAGTTCCACAGCAGCGAGATTTAAACTGTTTGAGACCCAGGTTTaGGAGGGAGGAAGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: HTLSSRFATSSTAARFKLFETQV*EGGSSS
Trigger: TGAAGAGCTTCCTCCCTCCCAAACCTGGGTCTCAAA...CAGTTTAAATCTCGCTGCTGTGGAACTTGTGGCAAAGCGTGAAGATAGGGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542621.5
CDS-3UTR CCA 90 bp GGAATTTGTCCAATGTTTGCACCAATAGGCTACAAACCTTCTGGCTCCCTGCTGAGGGAGGGTGTACTGTaGACACGCATAAACCCATTG +
Preference number: 4 (lower is better)
Translates to: GICPMFAPIGYKPSGSLLREGVL*TRINPL
Trigger: CAATGGGTTTATGCGTGTCCACAGTACACCCTCCCT...CAGCAGGGAGCCAGAAGGTTTGTAGCCTATTGGTGCAAACATTGGACAAATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CCA 90 bp CAGCAGCGAGATTTAAACTGGCTGAGTTGGCAGAGTTTCAGCTGTTTCACCTTCAGGGAGGGTGTACTGTaGACACGCATAAACCCATTG +
Preference number: 4 (lower is better)
Translates to: QQRDLNWLSWQSFSCFTFREGVL*TRINPL
Trigger: CAATGGGTTTATGCGTGTCCACAGTACACCCTCCCT...GAAGGTGAAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAATCTCGCTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542621.5
3UTR CAA 72 bp GAAAGTGCCTCCTTCCACATTAGCCAGCAGCCTTCATaGTCTTGTGGTGCTGCTGAGTTGCAATTCACAGAA +
Preference number: 4 (lower is better)
Translates to: ESASFHISQQPS*SCGAAELQFTE
Trigger: TTCTGTGAATTGCAACTCAGCAGCACCACAAGACAATGAAGGCTGCTGGCTAATGTGGAAGGAGGCACTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
3UTR CAA 72 bp AGGGTAGAGTTTTTCCCCACACCCTATCTTCACGCTTaGCCACAAGTTCCACAGCAGCGAGATTTAAACTGG +
Preference number: 4 (lower is better)
Translates to: RVEFFPTPYLHA*PQVPQQRDLNW
Trigger: CCAGTTTAAATCTCGCTGCTGTGGAACTTGTGGCAAAGCGTGAAGATAGGGTGTGGGGAAAAACTCTACCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR TCA 90 bp TTCATTCAGCCTCAATTACCCTTGAAAGGCAGTTGCTTCCCCGTGCTATTTGAGACTGGCCATGGTGCTTaGCATCATTATGAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: FIQPQLPLKGSCFPVLFETGHGA*HHYELS
Trigger: GCTCAGCTCATAATGATGTCAAGCACCATGGCCAGT...CTCAAATAGCACGGGGAAGCAACTGCCTTTCAAGGGTAATTGAGGCTGAATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR TCA 90 bp TTTCAGGTTCATTATCGTTTTGGTGGAGGTGTTGTTCCCTGGCTGTTTAGTGGGACTGGCCATGGTGCTTaGCATCATTATGAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: FQVHYRFGGGVVPWLFSGTGHGA*HHYELS
Trigger: GCTCAGCTCATAATGATGTCAAGCACCATGGCCAGT...CCCACTAAACAGCCAGGGAACAACACCTCCACCAAAACGATAATGAACCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380570.8
CDS-3UTR TCA 90 bp AAACACTCCTGTGTTTGTGATAGTGCGCTTCTAGGAAAGACACAGGAATTTGTCGGCTTGGCACTTGAGTaGACATGGGTTGTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: KHSCVCDSALLGKTQEFVGLALE*TWVVRV
Trigger: GACCCTGACAACCCATGTTCACTCAAGTGCCAAGCC...GACAAATTCCTGTGTCTTTCCTAGAAGCGCACTATCACAAACACAGGAGTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR TCA 90 bp TTGTCATTTCTGAGGCGGAGGGCACAATGGCTTATTTCATCTTTCTGTTTCCTTGTGCTTCCCAGCTGGTaGTCGCAGCCAACAATTTGG +
Preference number: 4 (lower is better)
Translates to: LSFLRRRAQWLISSFCFLVLPSW*SQPTIW
Trigger: CCAAATTGTTGGCTGCGATCACCAGCTGGGAAGCAC...AAGGAAACAGAAAGATGAAATAAGCCATTGTGCCCTCCGCCTCAGAAATGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR TCA 90 bp CCTCAATTACCCTTGAAAGGCAGTTGCTTCCCCGTGCTATTTGAGGGAACATTATCCAAGTTGCACTCCTaGAGCTTGGGTTTGGGTTTG +
Preference number: 4 (lower is better)
Translates to: PQLPLKGSCFPVLFEGTLSKLHS*SLGLGL
Trigger: CAAACCCAAACCCAAGCTTCAGGAGTGCAACTTGGA...TAATGTTCCCTCAAATAGCACGGGGAAGCAACTGCCTTTCAAGGGTAATTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR TCA 90 bp TCAACAACTGTTCTTGTCTGTGAGTCAACAAAAGGGTCACAGGATAACCTAACCGCAGGCGTTCCATGCTaGGTCGATACTGCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: STTVLVCESTKGSQDNLTAGVPC*VDTASC
Trigger: GCAAGAAGCAGTATCGACTCAGCATGGAACGCCTGC...GGTTAGGTTATCCTGTGACCCTTTTGTTGACTCACAGACAAGAACAGTTGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR TCA 90 bp GCATTTGGGTGTTGTTACAACACAGGAATGTGGTTAGAAAGACCCTTTTGCATGTCTTGCCTGTTGGCTTaGCAGCTGGCTGGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: AFGCCYNTGMWLERPFCMSCLLA*QLAGGK
Trigger: TTTCCCACCAGCCAGCTGTCAAGCCAACAGGCAAGA...CATGCAAAAGGGTCTTTCTAACCACATTCCTGTGTTGTAACAACACCCAAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR TCA 90 bp TGCCTGGCCTGCTCTGCAACCTCCTTTAGACATCTGTCCTTTCCTTTCCCAACAGAAGAATCCTGTCACTaGACTGAACTTCTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: CLACSATSFRHLSFPFPTEESCH*TELLLH
Trigger: ATGGAGAAGAAGTTCAGTTCAGTGACAGGATTCTTC...TGTTGGGAAAGGAAAGGACAGATGTCTAAAGGAGGTTGCAGAGCAGGCCAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR TCA 90 bp TCCTGTGTTTGTGATAGTGCGCTTCTAGGAAAGACACAGGAATTTGTCCAATGTAGGAGACGTCAGCACTaGAGGAAGGTTCGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: SCVCDSALLGKTQEFVQCRRRQH*RKVRSS
Trigger: ACTGGACCGAACCTTCCTTCAGTGCTGACGTCTCCT...ACATTGGACAAATTCCTGTGTCTTTCCTAGAAGCGCACTATCACAAACACAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR TCA 90 bp AGCGGGCCAGGCTATGTTACAGTTCAGGAAGGGTATAAAAGGACATTAATCATTACCCCTGCCTCATTCTaGGCAAGGCAGCTGAATTCC +
Preference number: 4 (lower is better)
Translates to: SGPGYVTVQEGYKRTLIITPASF*ARQLNS
Trigger: GGAATTCAGCTGCCTTGCTCAGAATGAGGCAGGGGT...AATGATTAATGTCCTTTTATACCCTTCCTGAACTGTAACATAGCCTGGCCCGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380538.4
CDS-3UTR TCA 90 bp GCAAAAATTACTTGGCCAAAGCTGCTCGGCTTAATGAGGATTTTGCCGAAGAGTTGTTTTCACATGGGGTaGTGTTGCAGCGCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: AKITWPKLLGLMRILPKSCFHMG*CCSAAS
Trigger: ACTGGCAGCGCTGCAACATCACCCCATGTGAAAACA...ACTCTTCGGCAAAATCCTCATTAAGCCGAGCAGCTTTGGCCAAGTAATTTTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR TCA 90 bp AGATTTAAACTGGCTGAGTTGGCAGAGTTTCAGCTGTTTCACCTTCTCGCAGTACTCTTTCTAGGTCTTTaGGACCCAGGTTTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: RFKLAELAEFQLFHLLAVLFLGL*DPGLGG
Trigger: CCCTCCCAAACCTGGGTCTCAAAGACCTAGAAAGAG...TACTGCGAGAAGGTGAAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542621.5
CDS-3UTR TCA 90 bp TTTAAACTGGCTGAGTTGGCAGAGTTTCAGCTGTTTCACCTTCTCGCAGTACCTTACAACCTGACAGCCTaGCAGATACTCTCTGGCACA +
Preference number: 4 (lower is better)
Translates to: FKLAELAEFQLFHLLAVPYNLTA*QILSGT
Trigger: TGTGCCAGAGAGTATCTGTCAGGCTGTCAGGTTGTA...AGGTACTGCGAGAAGGTGAAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542621.5
CDS-3UTR TCA 90 bp TTCCTGTGGAAACCTTCCCGTCAGCAAGTCAAACTGCTGATATTAATGAGCATGTTCAGCTGCTCCTTATaGCTCAGCGAGAAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: FLWKPSRQQVKLLILMSMFSCSL*LSEKGS
Trigger: ACTGCCCTTCTCGCTGAGTCATAAGGAGCAGCTGAA...CATGCTCATTAATATCAGCAGTTTGACTTGCTGACGGGAAGGTTTCCACAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380538.4
CDS-3UTR GCA 90 bp AGCTTTGGTGAGATGATTACACTTAGTTCAGAACCCATGAAAGCTACAACCAGTCAGTGTGCCAGGAGTTaGCCGACGGCAGCATTCCAT +
Preference number: 4 (lower is better)
Translates to: SFGEMITLSSEPMKATTSQCARS*PTAAFH
Trigger: ATGGAATGCTGCCGTCGGGCAACTCCTGGCACACTG...ACTGGTTGTAGCTTTCATGGGTTCTGAACTAAGTGTAATCATCTCACCAAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR GCA 90 bp AGATTAGGCCATTATACTTTGGTCCCCTTTATTGTTGCAATTAGCAACCTTCTAGTCCTCCTCGGAGCGTaGGGTCCTGGAACTCAGGAG +
Preference number: 4 (lower is better)
Translates to: RLGHYTLVPFIVAISNLLVLLGA*GPGTQE
Trigger: CTCCTGAGTTCCAGGACCGCACGCTCCGAGGAGGAC...TAGAAGGTTGCTAATTGCAACAATAAAGGGGACCAAAGTATAATGGCCTAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR GCA 90 bp ACTCTAGTCTACTTTTCCTTCGCACAATACAACACTTGGTACTTTTCACTGAAAGTCCTCCTCGGAGCGTaGGGTCCTGGAACTCAGGAG +
Preference number: 4 (lower is better)
Translates to: TLVYFSFAQYNTWYFSLKVLLGA*GPGTQE
Trigger: CTCCTGAGTTCCAGGACCGCACGCTCCGAGGAGGAC...TTTCAGTGAAAAGTACCAAGTGTTGTATTGTGCGAAGGAAAAGTAGACTAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431052.6
CDS-3UTR GCA 90 bp AGATTAGGCCATTATACTTTGGTCCCCTTTATTGTTGCAATTAGCAACCTTCTACCCCACCCCCGCAGGTaGGTGAGCATTCACTCCATG +
Preference number: 4 (lower is better)
Translates to: RLGHYTLVPFIVAISNLLPHPRR*VSIHSM
Trigger: CATGGAGTGAATGCTCACGCACCTGCGGGGGTGGGG...TAGAAGGTTGCTAATTGCAACAATAAAGGGGACCAAAGTATAATGGCCTAATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR GCA 90 bp ACTCTAGTCTACTTTTCCTTCGCACAATACAACACTTGGTACTTTTCACTGAAACCCCACCCCCGCAGGTaGGTGAGCATTCACTCCATG +
Preference number: 4 (lower is better)
Translates to: TLVYFSFAQYNTWYFSLKPHPRR*VSIHSM
Trigger: CATGGAGTGAATGCTCACGCACCTGCGGGGGTGGGG...TTTCAGTGAAAAGTACCAAGTGTTGTATTGTGCGAAGGAAAAGTAGACTAGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000431052.6
CDS-3UTR GCA 90 bp AGCTTTGGTGAGATGATTACACTTAGTTCAGAACCCATGAAAGCTACAACCAGTAGCTGGGATTTATACTaGCCTCGGACCAGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: SFGEMITLSSEPMKATTSSWDLY*PRTSRQ
Trigger: CTGCCGGCTGGTCCGAGGGCAGTATAAATCCCAGCT...ACTGGTTGTAGCTTTCATGGGTTCTGAACTAAGTGTAATCATCTCACCAAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR GCA 90 bp TCAACAACTGTTCTTGTCTGTGAGTCAACAAAAGGGTCACAGGATAACCTAACCTCCACTGAAGTGACATaGCCCTGGATGTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: STTVLVCESTKGSQDNLTSTEVT*PWMSSS
Trigger: GGAGGAGGACATCCAGGGGCATGTCACTTCAGTGGA...GGTTAGGTTATCCTGTGACCCTTTTGTTGACTCACAGACAAGAACAGTTGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR GCA 90 bp CCTCAATTACCCTTGAAAGGCAGTTGCTTCCCCGTGCTATTTGAGGGAACATTACCATGCTTGGATCCTTaGCGGAATCAGAATCGGACA +
Preference number: 4 (lower is better)
Translates to: PQLPLKGSCFPVLFEGTLPCLDP*RNQNRT
Trigger: TGTCCGATTCTGATTCCGGCAAGGATCCAAGCATGG...TAATGTTCCCTCAAATAGCACGGGGAAGCAACTGCCTTTCAAGGGTAATTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR GCA 90 bp ACAAACATTAAATGTACATTCATTTCATGCAACGAGCATTCTGCTTCCCACCCATACAAGCTTGCACCGTaGTGGGCTTGGGCTGGCGAC +
Preference number: 4 (lower is better)
Translates to: TNIKCTFISCNEHSASHPYKLAP*WAWAGD
Trigger: GTCGCCAGCCCAAGCCCAGCACGGTGCAAGCTTGTA...TGGGTGGGAAGCAGAATGCTCGTTGCATGAAATGAATGTACATTTAATGTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp ATGAAGAGGTTGCTACAACCTGACAGCCTGACAGATACTCTCTGGCACAGTGACTCTTTCTTGCATGCTTaGTGGCAGGCAGGTTTTGAA +
Preference number: 4 (lower is better)
Translates to: MKRLLQPDSLTDTLWHSDSFLHA*WQAGFE
Trigger: TTCAAAACCTGCCTGCCAGCAAGCATGCAAGAAAGA...GTCACTGTGCCAGAGAGTATCTGTCAGGCTGTCAGGTTGTAGCAACCTCTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp TCCTGTGTTTGTGATAGTGCGCTTCTAGGAAAGACACAGGAATTTGTCCAATGTGGATCAGCAGCTGGGTaGTCTCAGTCAGCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: SCVCDSALLGKTQEFVQCGSAAG*SQSALH
Trigger: ATGGAGAGCTGACTGAGAGCACCCAGCTGCTGATCC...ACATTGGACAAATTCCTGTGTCTTTCCTAGAAGCGCACTATCACAAACACAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp AGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTTCACGCTTTTTCTGCAATGTTGTGTaGCTTAGAGCCTGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: SPSCGQGRVFPHTLSSRFFCNVV*LRACFV
Trigger: AACAAAGCAGGCTCTAAGGCACACAACATTGCAGAA...AAAGCGTGAAGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000542621.5
CDS-3UTR GCA 90 bp GTTTGTGATAGTGCGCTTCTAGGAAAGACACAGGAATTTGTCCAATGTTTGCACCTGAGCATGCGCACATaGATGGGATCAGAGCTGGTC +
Preference number: 4 (lower is better)
Translates to: VCDSALLGKTQEFVQCLHLSMRT*MGSELV
Trigger: GACCAGCTCTGATCCCATGCATGTGCGCATGCTCAG...GTGCAAACATTGGACAAATTCCTGTGTCTTTCCTAGAAGCGCACTATCACAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp GCAAAAATTACTTGGCCAAAGCTGCTCGGCTTAATGAGGATTTTGCCGAAGAGTCAGGCTGGCTGGAAATaGAGCCCTGATGTCAATGGT +
Preference number: 4 (lower is better)
Translates to: AKITWPKLLGLMRILPKSQAGWK*SPDVNG
Trigger: ACCATTGACATCAGGGCTGCATTTCCAGCCAGCCTG...ACTCTTCGGCAAAATCCTCATTAAGCCGAGCAGCTTTGGCCAAGTAATTTTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp CCTCCTTCCACATTAGCCAGCAGCCTTCATTGTCTTGTGGTGCTGCTGAGTTGCGAGCTGGAGGATGCTTaGTCTTTAGGAAATGTAAAT +
Preference number: 4 (lower is better)
Translates to: PPSTLASSLHCLVVLLSCELEDA*SLGNVN
Trigger: ATTTACATTTCCTAAAGAGCAAGCATCCTCCAGCTC...GCAACTCAGCAGCACCACAAGACAATGAAGGCTGCTGGCTAATGTGGAAGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp AGGTTCATTATCGTTTTGGTGGAGGTGTTGTTCCCTGGCTGTTTAGTGGGGCCATCGCAGCCAACAATTTaGCATAAACCACTGATGCAC +
Preference number: 4 (lower is better)
Translates to: RFIIVLVEVLFPGCLVGPSQPTI*HKPLMH
Trigger: GTGCATCAGTGGTTTATGCCAAATTGTTGGCTGCGA...TGGCCCCACTAAACAGCCAGGGAACAACACCTCCACCAAAACGATAATGAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380570.8
CDS-3UTR CCA 90 bp TGGTGGGAAATCAGAGAATTGAGTTTATCTGGAGCAAATGCGACAACATTAAGCCTGACTATTCGCACCTaGGTCCCCACACCACAGGTG +
Preference number: 4 (lower is better)
Translates to: WWEIRELSLSGANATTLSLTIRT*VPTPQV
Trigger: CACCTGTGGTGTGGGGACCCAGGTGCGAATAGTCAG...GCTTAATGTTGTCGCATTTGCTCCAGATAAACTCAATTCTCTGATTTCCCACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CCA 90 bp CTATTCGTTTTGGTGCTCAAAGAAGGGTTTAGGGACCACGAGTCCCAGCAGTTTCCCATCTGTCTCGTCTaGGTTGAACTCAGGAATTTC +
Preference number: 4 (lower is better)
Translates to: LFVLVLKEGFRDHESQQFPICLV*VELRNF
Trigger: GAAATTCCTGAGTTCAACCCAGACGAGACAGATGGG...AAACTGCTGGGACTCGTGGTCCCTAAACCCTTCTTTGAGCACCAAAACGAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CCA 90 bp CTATTCGTTTTGGTGCTCAAAGAAGGGTTTAGGGACCACGAGTCCCAGCAGTTTGATACTGCTTCTTGCTaGGCAGGGATCCAAATTGCA +
Preference number: 4 (lower is better)
Translates to: LFVLVLKEGFRDHESQQFDTASC*AGIQIA
Trigger: TGCAATTTGGATCCCTGCCCAGCAAGAAGCAGTATC...AAACTGCTGGGACTCGTGGTCCCTAAACCCTTCTTTGAGCACCAAAACGAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CCA 90 bp AGTTCCACAGCAGCGAGATTTAAACTGGCTGAGTTGGCAGAGTTTCAGCTGTTTATGCCATCCCGTGTCTaGCAGAAGACTTGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: SSTAARFKLAELAEFQLFMPSRV*QKTCLC
Trigger: ACACAGACAAGTCTTCTGCCAGACACGGGATGGCAT...AAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAATCTCGCTGCTGTGGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR CCA 90 bp TGGGCCAGCTCTGGAATGAAGAGGTTGCTACAACCTGACAGCCTGACAGATACTTTAAACTGGCTGAGTTaGCAGAGTTTCAGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: WASSGMKRLLQPDSLTDTLNWLS*QSFSCF
Trigger: GAAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAA...AGTATCTGTCAGGCTGTCAGGTTGTAGCAACCTCTTCATTCCAGAGCTGGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CCA 90 bp GTTTGTGATAGTGCGCTTCTAGGAAAGACACAGGAATTTGTCCAATGTTTGCACGTGGGTAAGGGACTCTaGCCACCCTTGCTCCTAAAC +
Preference number: 4 (lower is better)
Translates to: VCDSALLGKTQEFVQCLHVGKGL*PPLLLN
Trigger: GTTTAGGAGCAAGGGTGGCCAGAGTCCCTTACCCAC...GTGCAAACATTGGACAAATTCCTGTGTCTTTCCTAGAAGCGCACTATCACAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CCA 90 bp CCCTATCTTCACGCTTTGCCACAAGTTCCACAGCAGCGAGATTTAAACTGGCTGAAGGCCCATTGCACTTaGATCACTAAAGATGCCTTC +
Preference number: 4 (lower is better)
Translates to: PYLHALPQVPQQRDLNWLKAHCT*ITKDAF
Trigger: GAAGGCATCTTTAGTGATCCAAGTGCAATGGGCCTT...CAGCCAGTTTAAATCTCGCTGCTGTGGAACTTGTGGCAAAGCGTGAAGATAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388710.8
CDS-3UTR TCA 90 bp CTTAGTTCAGAACCCATGAAAGCTACAACCAGTGAGACACTGCTTTCTTTAAACGGCTTGGCACTTGAGTaGACATGGGTTGTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: LSSEPMKATTSETLLSLNGLALE*TWVVRV
Trigger: GACCCTGACAACCCATGTTCACTCAAGTGCCAAGCC...GTTTAAAGAAAGCAGTGTCTCACTGGTTGTAGCTTTCATGGGTTCTGAACTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR TCA 90 bp TGCCTCAGAAGGACAGGCTTCCTCTTTGGGACTGCAGCTGGTAACCTGACTTGTTTTGGCATAAACCACTaGTGCACATATCCAAAGATT +
Preference number: 4 (lower is better)
Translates to: CLRRTGFLFGTAAGNLTCFGINH*CTYPKI
Trigger: AATCTTTGGATATGTGCATCAGTGGTTTATGCCAAA...ACAAGTCAGGTTACCAGCTGCAGTCCCAAAGAGGAAGCCTGTCCTTCTGAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380570.8
CDS-3UTR TCA 90 bp ACACTTAGTTCAGAACCCATGAAAGCTACAACCAGTGAGACACTGCTTTCTTTAGTGCTTCCCAGCTGGTaGTCGCAGCCAACAATTTGG +
Preference number: 4 (lower is better)
Translates to: TLSSEPMKATTSETLLSLVLPSW*SQPTIW
Trigger: CCAAATTGTTGGCTGCGATCACCAGCTGGGAAGCAC...TAAAGAAAGCAGTGTCTCACTGGTTGTAGCTTTCATGGGTTCTGAACTAAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR TCA 90 bp TCAACAACTGTTCTTGTCTGTGAGTCAACAAAAGGGTCACAGGATAACCTAACCCACAGTTATCTTCCTTaGCGGTGCTTCCCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: STTVLVCESTKGSQDNLTHSYLP*RCFPAG
Trigger: ACCAGCTGGGAAGCACCGTCAAGGAAGATAACTGTG...GGTTAGGTTATCCTGTGACCCTTTTGTTGACTCACAGACAAGAACAGTTGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR TCA 90 bp GGGAAGGAGGCAAAAATTACTTGGCCAAAGCTGCTCGGCTTAATGAGGATTTTGAGAGGTCATAAGGCATaGTCTGCTTGTATCCGTCAC +
Preference number: 4 (lower is better)
Translates to: GKEAKITWPKLLGLMRILRGHKA*SACIRH
Trigger: GTGACGGATACAAGCAGATCATGCCTTATGACCTCT...CAAAATCCTCATTAAGCCGAGCAGCTTTGGCCAAGTAATTTTTGCCTCCTTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR TCA 90 bp TGGTGGGAAATCAGAGAATTGAGTTTATCTGGAGCAAATGCGACAACATTAAGCCTGTCTCGTCTGGGTTaGACTCAGGAATTTCCCCGC +
Preference number: 4 (lower is better)
Translates to: WWEIRELSLSGANATTLSLSRLG*TQEFPR
Trigger: GCGGGGAAATTCCTGAGTTCAACCCAGACGAGACAG...GCTTAATGTTGTCGCATTTGCTCCAGATAAACTCAATTCTCTGATTTCCCACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR TCA 90 bp TTTGGTGAGATGATTACACTTAGTTCAGAACCCATGAAAGCTACAACCAGTGAGTTACGAGGGCTCCTCTaGCACAGCAGCTCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: FGEMITLSSEPMKATTSELRGLL*HSSSFF
Trigger: GAAGAAGGAGCTGCTGTGTCAGAGGAGCCCTCGTAA...CTCACTGGTTGTAGCTTTCATGGGTTCTGAACTAAGTGTAATCATCTCACCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR TCA 90 bp ACAAACATTAAATGTACATTCATTTCATGCAACGAGCATTCTGCTTCCCACCCAGGCCGACCCCACATGTaGGACTACATGGACTCCACT +
Preference number: 4 (lower is better)
Translates to: TNIKCTFISCNEHSASHPGRPHM*DYMDST
Trigger: AGTGGAGTCCATGTAGTCTCACATGTGGGGTCGGCC...TGGGTGGGAAGCAGAATGCTCGTTGCATGAAATGAATGTACATTTAATGTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR TCA 90 bp GTTTGTGATAGTGCGCTTCTAGGAAAGACACAGGAATTTGTCCAATGTTTGCACATATTAGGGACAGGGTaGCCTTTGATGGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: VCDSALLGKTQEFVQCLHILGTG*PLMGQP
Trigger: TGGCTGCCCCATCAAAGGTCACCCTGTCCCTAATAT...GTGCAAACATTGGACAAATTCCTGTGTCTTTCCTAGAAGCGCACTATCACAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR TCA 90 bp GTTTGTGATAGTGCGCTTCTAGGAAAGACACAGGAATTTGTCCAATGTTTGCACCAGCTGAATTCCCCTTaGGACCCACCGCTAAGGTTT +
Preference number: 4 (lower is better)
Translates to: VCDSALLGKTQEFVQCLHQLNSP*DPPLRF
Trigger: AAACCTTAGCGGTGGGTCTCAAGGGGAATTCAGCTG...GTGCAAACATTGGACAAATTCCTGTGTCTTTCCTAGAAGCGCACTATCACAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR TCA 90 bp AAGGCAGTTGCTTCCCCGTGCTATTTGAGGGAACATTATCTGGGGAACAATAGAAGCCACAGGGCTCAGTaGAGAGTCTTTTGTCATTTC +
Preference number: 4 (lower is better)
Translates to: KAVASPCYLREHYLGNNRSHRAQ*RVFCHF
Trigger: GAAATGACAAAAGACTCTTCACTGAGCCCTGTGGCT...TCTATTGTTCCCCAGATAATGTTCCCTCAAATAGCACGGGGAAGCAACTGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR GCA 90 bp ATTGAGTTTATCTGGAGCAAATGCGACAACATTAAGCTCAACAACTGTTCTTGTGAAAGAGGAGCAGTGTaGCAGGAGTTGCCCGACGGC +
Preference number: 4 (lower is better)
Translates to: IEFIWSKCDNIKLNNCSCERGAV*QELPDG
Trigger: GCCGTCGGGCAACTCCTGGCACACTGCTCCTCTTTC...ACAAGAACAGTTGTTGAGCTTAATGTTGTCGCATTTGCTCCAGATAAACTCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR GCA 90 bp ACTCTAGTCTACTTTTCCTTCGCACAATACAACACTTGGTACTTTTCACTGAAAGAAAGAGGAGCAGTGTaGCAGGAGTTGCCCGACGGC +
Preference number: 4 (lower is better)
Translates to: TLVYFSFAQYNTWYFSLKERGAV*QELPDG
Trigger: GCCGTCGGGCAACTCCTGGCACACTGCTCCTCTTTC...TTTCAGTGAAAAGTACCAAGTGTTGTATTGTGCGAAGGAAAAGTAGACTAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431052.6
CDS-3UTR GCA 90 bp GGAATTTGTCCAATGTTTGCACCAATAGGCTACAAACCTTCTGGCTCCCTGCTGCTTGACAATGAAATCTaGTGTGAGTGGTCCAGCCAT +
Preference number: 4 (lower is better)
Translates to: GICPMFAPIGYKPSGSLLLDNEI*CEWSSH
Trigger: ATGGCTGGACCACTCACAGCAGATTTCATTGTCAAG...CAGCAGGGAGCCAGAAGGTTTGTAGCCTATTGGTGCAAACATTGGACAAATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp ATAAAGAATCATGGGACATGTGAGCAAGTCATGGGATCTCAGATCATCAGGTACCAGCAACCACACGGTTaGTCCTCAGATCGTAGCACT +
Preference number: 4 (lower is better)
Translates to: IKNHGTCEQVMGSQIIRYQQPHG*SSDRST
Trigger: AGTGCTACGATCTGAGGAGCAACCGTGTGGTTGCTG...GTACCTGATGATCTGAGATCCCATGACTTGCTCACATGTCCCATGATTCTTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR GCA 90 bp ATGATTACACTTAGTTCAGAACCCATGAAAGCTACAACCAGTGAGACACTGCTTTCCACTGAAGTGACATaGCCCTGGATGTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: MITLSSEPMKATTSETLLSTEVT*PWMSSS
Trigger: GGAGGAGGACATCCAGGGGCATGTCACTTCAGTGGA...AAGCAGTGTCTCACTGGTTGTAGCTTTCATGGGTTCTGAACTAAGTGTAATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR GCA 90 bp ATAAAGAATCATGGGACATGTGAGCAAGTCATGGGATCTCAGATCATCAGGTACCTACAGCCTCCTGTGTaGATTCCTCGATGGTCGATG +
Preference number: 4 (lower is better)
Translates to: IKNHGTCEQVMGSQIIRYLQPPV*IPRWSM
Trigger: CATCGACCATCGAGGAATGCACACAGGAGGCTGTAG...GTACCTGATGATCTGAGATCCCATGACTTGCTCACATGTCCCATGATTCTTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR GCA 90 bp GGGAAGGAGGCAAAAATTACTTGGCCAAAGCTGCTCGGCTTAATGAGGATTTTGAGGGAGTGGGTACGATaGATTCCTCTTTTATGTGGG +
Preference number: 4 (lower is better)
Translates to: GKEAKITWPKLLGLMRILREWVR*IPLLCG
Trigger: CCCACATAAAAGAGGAATGCATCGTACCCACTCCCT...CAAAATCCTCATTAAGCCGAGCAGCTTTGGCCAAGTAATTTTTGCCTCCTTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp ATTGAGTTTATCTGGAGCAAATGCGACAACATTAAGCTCAACAACTGTTCTTGTACAGGCACGCTGGGATaGTGGCTTGGGCCCTTCACA +
Preference number: 4 (lower is better)
Translates to: IEFIWSKCDNIKLNNCSCTGTLG*WLGPFT
Trigger: TGTGAAGGGCCCAAGCCAGCATCCCAGCGTGCCTGT...ACAAGAACAGTTGTTGAGCTTAATGTTGTCGCATTTGCTCCAGATAAACTCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR GCA 90 bp GAGATGATTACACTTAGTTCAGAACCCATGAAAGCTACAACCAGTGAGACACTGGACGGCAGCATTCCATaGTTGGATCCTTGCCGGAAT +
Preference number: 4 (lower is better)
Translates to: EMITLSSEPMKATTSETLDGSIP*LDPCRN
Trigger: ATTCCGGCAAGGATCCAAGCATGGAATGCTGCCGTC...CAGTGTCTCACTGGTTGTAGCTTTCATGGGTTCTGAACTAAGTGTAATCATCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR GCA 90 bp TCATTCCTGTGGAAACCTTCCCGTCAGCAAGTCAAACTGCTGATATTAATGAGCAAGGATCTGTCCAGCTaGCAAGATGTGATGCGTCAG +
Preference number: 4 (lower is better)
Translates to: SFLWKPSRQQVKLLILMSKDLSS*QDVMRQ
Trigger: CTGACGCATCACATCTTGGCAGCTGGACAGATCCTT...GCTCATTAATATCAGCAGTTTGACTTGCTGACGGGAAGGTTTCCACAGGAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380538.4
CDS-3UTR GCA 90 bp CTGCCTCAGCATGGTGTCCCCTCCCCATTTGTCCTAACTGTGACTAAAGGGACAAATTTGTCCAATGTTTaGACCAATAGGCTACAAACC +
Preference number: 4 (lower is better)
Translates to: LPQHGVPSPFVLTVTKGTNLSNV*TNRLQT
Trigger: GGTTTGTAGCCTATTGGTGCAAACATTGGACAAATT...TGTCCCTTTAGTCACAGTTAGGACAAATGGGGAGGGGACACCATGCTGAGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp CAGATGCCCAATGTAGATTGCACCTCTAATGGTTCCCCATGTCTGGTAGCATGTATGCCCAATGTAGATTaGACCTCTAATGGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: QMPNVDCTSNGSPCLVACMPNVD*TSNGSP
Trigger: TGGGGAACCATTAGAGGTGCAATCTACATTGGGCAT...ACATGCTACCAGACATGGGGAACCATTAGAGGTGCAATCTACATTGGGCATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR CCA 90 bp TTTCAGGTTCATTATCGTTTTGGTGGAGGTGTTGTTCCCTGGCTGTTTAGTGGGGAAATCACCTGCTTCTaGTGGGCAGTCCACATTACT +
Preference number: 4 (lower is better)
Translates to: FQVHYRFGGGVVPWLFSGEITCF*WAVHIT
Trigger: AGTAATGTGGACTGCCCACCAGAAGCAGGTGATTTC...CCCACTAAACAGCCAGGGAACAACACCTCCACCAAAACGATAATGAACCTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380570.8
CDS-3UTR CCA 90 bp TCAACAACTGTTCTTGTCTGTGAGTCAACAAAAGGGTCACAGGATAACCTAACCTTGGTTGCGGAGAGCTaGGATTTATACTGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: STTVLVCESTKGSQDNLTLVAES*DLYCPR
Trigger: CCGAGGGCAGTATAAATCCCAGCTCTCCGCAACCAA...GGTTAGGTTATCCTGTGACCCTTTTGTTGACTCACAGACAAGAACAGTTGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CCA 90 bp CCTCAATTACCCTTGAAAGGCAGTTGCTTCCCCGTGCTATTTGAGGGAACATTACAGTATCATCCGATTTaGTTGCGGAGAGCTGGGATT +
Preference number: 4 (lower is better)
Translates to: PQLPLKGSCFPVLFEGTLQYHPI*LRRAGI
Trigger: AATCCCAGCTCTCCGCAACCAAATCGGATGATACTG...TAATGTTCCCTCAAATAGCACGGGGAAGCAACTGCCTTTCAAGGGTAATTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR CCA 90 bp CTATTCGTTTTGGTGCTCAAAGAAGGGTTTAGGGACCACGAGTCCCAGCAGTTTGAAATCTGCTGTGAGTaGTCCAGCCATTCTCAGTAT +
Preference number: 4 (lower is better)
Translates to: LFVLVLKEGFRDHESQQFEICCE*SSHSQY
Trigger: ATACTGAGAATGGCTGGACCACTCACAGCAGATTTC...AAACTGCTGGGACTCGTGGTCCCTAAACCCTTCTTTGAGCACCAAAACGAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CCA 90 bp TGCCTGGCCTGCTCTGCAACCTCCTTTAGACATCTGTCCTTTCCTTTCCCAACAGGGTTTGATGTTCTCTaGGTAATAGTGACAGTATTG +
Preference number: 4 (lower is better)
Translates to: CLACSATSFRHLSFPFPTGFDVL*VIVTVL
Trigger: CAATACTGTCACTATTACCCAGAGAACATCAAACCC...TGTTGGGAAAGGAAAGGACAGATGTCTAAAGGAGGTTGCAGAGCAGGCCAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp GATCTCAGATCATCAGGTACAACCAGTTCACTTTGCAGATGTGGAAACATAAAGAATTTCCCCGCTGCATaGGCCTGCATAACAGGCACG +
Preference number: 4 (lower is better)
Translates to: DLRSSGTTSSLCRCGNIKNFPAA*ACITGT
Trigger: CGTGCCTGTTATGCAGGCCCATGCAGCGGGGAAATT...CTTTATGTTTCCACATCTGCAAAGTGAACTGGTTGTACCTGATGATCTGAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CCA 90 bp TGGTGGGAAATCAGAGAATTGAGTTTATCTGGAGCAAATGCGACAACATTAAGCAGAGGTCTTGCCTGTTaGCTTGACAGCTGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: WWEIRELSLSGANATTLSRGLAC*LDSWLV
Trigger: CACCAGCCAGCTGTCAAGCCAACAGGCAAGACCTCT...GCTTAATGTTGTCGCATTTGCTCCAGATAAACTCAATTCTCTGATTTCCCACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CCA 90 bp TGTCCACAGCTCACTAGGTGGGGACACAGATTAATATTGTCTTCCTCTCAAATTGAGAAGATCCCGTTCTaGTGTTTGTGGGTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: CPQLTRWGHRLILSSSQIEKIPF*CLWVCR
Trigger: CCTGCAGACCCACAAACACCAGAACGGGATCTTCTC...AATTTGAGAGGAAGACAATATTAATCTGTGTCCCCACCTAGTGAGCTGTGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp ACAAACATTAAATGTACATTCATTTCATGCAACGAGCATTCTGCTTCCCACCCAGCCTTGGGTGGCCGATaGCCTCACAGTGCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: TNIKCTFISCNEHSASHPALGGR*PHSAEE
Trigger: TTCTTCTGCACTGTGAGGCCATCGGCCACCCAAGGC...TGGGTGGGAAGCAGAATGCTCGTTGCATGAAATGAATGTACATTTAATGTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp AAACACTCCTGTGTTTGTGATAGTGCGCTTCTAGGAAAGACACAGGAATTTGTCTGCTCAAAATGGCCCTaGCCCACAGCAGCAGTTAGT +
Preference number: 4 (lower is better)
Translates to: KHSCVCDSALLGKTQEFVCSKWP*PTAAVS
Trigger: ACTAACTGCTGCTGTGGGCCAGGGCCATTTTGAGCA...GACAAATTCCTGTGTCTTTCCTAGAAGCGCACTATCACAAACACAGGAGTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CCA 90 bp TGGGGAAGAGGAGACAAAGGAGCAAAACACTCCTGTGTTTGTGATAGTGCGCTTGAGGCAAAAATTACTTaGCCAAAGCTGCTCGGCTTA +
Preference number: 4 (lower is better)
Translates to: WGRGDKGAKHSCVCDSALEAKIT*PKLLGL
Trigger: TAAGCCGAGCAGCTTTGGCCAAGTAATTTTTGCCTC...AAGCGCACTATCACAAACACAGGAGTGTTTTGCTCCTTTGTCTCCTCTTCCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR CAA 72 bp ATGGGATCTCAGATCATCAGGTACAACCAGTTCACTTaGCAGATGTGGAAACATAAAGGGCAGACACCTCGC +
Preference number: 4 (lower is better)
Translates to: MGSQIIRYNQFT*QMWKHKGQTPR
Trigger: GCGAGGTGTCTGCCCTTTATGTTTCCACATCTGCAAAGTGAACTGGTTGTACCTGATGATCTGAGATCCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276935.6
3UTR CAA 72 bp ATGAGGATTTTGCCGAAGAGTCCCAGAGTTTTCATTTaGCTGCATGACTTTGACTTTGCTCCAGCCGCCTCA +
Preference number: 4 (lower is better)
Translates to: MRILPKSPRVFI*LHDFDFAPAAS
Trigger: TGAGGCGGCTGGAGCAAAGTCAAAGTCATGCAGCAAAATGAAAACTCTGGGACTCTTCGGCAAAATCCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
3UTR CAA 72 bp ACAAGTTCCACAGCAGCGAGATTTAAACTGGCTGAGTaGGCAGAGTTTCAGCTGTTTCACCTTCTCGCAGTA +
Preference number: 4 (lower is better)
Translates to: TSSTAARFKLAE*AEFQLFHLLAV
Trigger: TACTGCGAGAAGGTGAAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAATCTCGCTGCTGTGGAACTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR TCA 90 bp TTTGGTGAGATGATTACACTTAGTTCAGAACCCATGAAAGCTACAACCAGTGAGCACAGTTATCTTCCTTaGCGGTGCTTCCCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: FGEMITLSSEPMKATTSEHSYLP*RCFPAG
Trigger: ACCAGCTGGGAAGCACCGTCAAGGAAGATAACTGTG...CTCACTGGTTGTAGCTTTCATGGGTTCTGAACTAAGTGTAATCATCTCACCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR TCA 90 bp GGGAAGGAGGCAAAAATTACTTGGCCAAAGCTGCTCGGCTTAATGAGGATTTTGTGGGTTGATAGAAGATaGACTGGACTGTACTGTCAG +
Preference number: 4 (lower is better)
Translates to: GKEAKITWPKLLGLMRILWVDRR*TGLYCQ
Trigger: CTGACAGTACAGTCCAGTTCATCTTCTATCAACCCA...CAAAATCCTCATTAAGCCGAGCAGCTTTGGCCAAGTAATTTTTGCCTCCTTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR TCA 90 bp TGTCCACAGCTCACTAGGTGGGGACACAGATTAATATTGTCTTCCTCTCAAATTTCCTCCACAGGTTGCTaGGCAAGGAAAGAAATCCGT +
Preference number: 4 (lower is better)
Translates to: CPQLTRWGHRLILSSSQISSTGC*ARKEIR
Trigger: ACGGATTTCTTTCCTTGCTCAGCAACCTGTGGAGGA...AATTTGAGAGGAAGACAATATTAATCTGTGTCCCCACCTAGTGAGCTGTGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR TCA 90 bp ACACTTAGTTCAGAACCCATGAAAGCTACAACCAGTGAGACACTGCTTTCTTTAACTCTTCCACTGAAGTaGCATGCCCCTGGATGTCCT +
Preference number: 4 (lower is better)
Translates to: TLSSEPMKATTSETLLSLTLPLK*HAPGCP
Trigger: AGGACATCCAGGGGCATGTCACTTCAGTGGAAGAGT...TAAAGAAAGCAGTGTCTCACTGGTTGTAGCTTTCATGGGTTCTGAACTAAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR TCA 90 bp CATCAGAGTGAGATATTCCACAGGAAAGGCACCTCTATACAATTATCATTTTTAGGACCACACGGTATCTaGGGCCCTGGCCACATGTCA +
Preference number: 4 (lower is better)
Translates to: HQSEIFHRKGTSIQLSFLGPHGI*GPGHMS
Trigger: TGACATGTGGCCAGGGCCTCAGATACCGTGTGGTCC...TAAAAATGATAATTGTATAGAGGTGCCTTTCCTGTGGAATATCTCACTCTGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR TCA 90 bp TCAACAACTGTTCTTGTCTGTGAGTCAACAAAAGGGTCACAGGATAACCTAACCGCTCTTGAGCTTGTTTaGACCATGGCAACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: STTVLVCESTKGSQDNLTALELV*TMATWP
Trigger: AGGCCAAGTTGCCATGGTTCAAACAAGCTCAAGAGC...GGTTAGGTTATCCTGTGACCCTTTTGTTGACTCACAGACAAGAACAGTTGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR TCA 90 bp GAGATGATTACACTTAGTTCAGAACCCATGAAAGCTACAACCAGTGAGACACTGGCTCTTGAGCTTGTTTaGACCATGGCAACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: EMITLSSEPMKATTSETLALELV*TMATWP
Trigger: AGGCCAAGTTGCCATGGTTCAAACAAGCTCAAGAGC...CAGTGTCTCACTGGTTGTAGCTTTCATGGGTTCTGAACTAAGTGTAATCATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR TCA 90 bp ACAAACATTAAATGTACATTCATTTCATGCAACGAGCATTCTGCTTCCCACCCAACTCGGAGCACTTGGTaGACCCCTCATACTCCCAGT +
Preference number: 4 (lower is better)
Translates to: TNIKCTFISCNEHSASHPTRSTW*TPHTPS
Trigger: ACTGGGAGTATGAGGGGTTCACCAAGTGCTCCGAGT...TGGGTGGGAAGCAGAATGCTCGTTGCATGAAATGAATGTACATTTAATGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR TCA 90 bp AAACACTCCTGTGTTTGTGATAGTGCGCTTCTAGGAAAGACACAGGAATTTGTCCTGCAACCTGGCAGTTaGTTGTCACATTCACTCCCT +
Preference number: 4 (lower is better)
Translates to: KHSCVCDSALLGKTQEFVLQPGS*LSHSLP
Trigger: AGGGAGTGAATGTGACAATCAACTGCCAGGTTGCAG...GACAAATTCCTGTGTCTTTCCTAGAAGCGCACTATCACAAACACAGGAGTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR TCA 90 bp AAACACTCCTGTGTTTGTGATAGTGCGCTTCTAGGAAAGACACAGGAATTTGTCGAGGTTGCTACAACCTaGCAGCCTGACAGATACTCT +
Preference number: 4 (lower is better)
Translates to: KHSCVCDSALLGKTQEFVEVATT*QPDRYS
Trigger: AGAGTATCTGTCAGGCTGTCAGGTTGTAGCAACCTC...GACAAATTCCTGTGTCTTTCCTAGAAGCGCACTATCACAAACACAGGAGTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR TCA 90 bp AGCCAGCAGCCTTCATTGTCTTGTGGTGCTGCTGAGTTGCAATTCACAGAACAACTATTATGCCACAAATaGATTCCCTCTTACTGCCTC +
Preference number: 4 (lower is better)
Translates to: SQQPSLSCGAAELQFTEQLLCHK*IPSYCL
Trigger: GAGGCAGTAAGAGGGAATTCATTTGTGGCATAATAG...TTGTTCTGTGAATTGCAACTCAGCAGCACCACAAGACAATGAAGGCTGCTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR TCA 90 bp GCTCTATCATCAAAGCAGCTTTTACAGATTCGGGATCATTCATTCAGCCTCAATAGCCTCAATTACCCTTaGAAGGCAGTTGCTTCCCCG +
Preference number: 4 (lower is better)
Translates to: ALSSKQLLQIRDHSFSLNSLNYP*KAVASP
Trigger: CGGGGAAGCAACTGCCTTTCAAGGGTAATTGAGGCT...ATTGAGGCTGAATGAATGATCCCGAATCTGTAAAAGCTGCTTTGATGATAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR GCA 90 bp ATTGAGTTTATCTGGAGCAAATGCGACAACATTAAGCTCAACAACTGTTCTTGTCTTCACAGCTCTTGCTaGTCAGGCAGCGCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: IEFIWSKCDNIKLNNCSCLHSSC*SGSASE
Trigger: CTCTGAGGCGCTGCCTGAGCAGCAAGAGCTGTGAAG...ACAAGAACAGTTGTTGAGCTTAATGTTGTCGCATTTGCTCCAGATAAACTCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR GCA 90 bp GGAATTTGTCCAATGTTTGCACCAATAGGCTACAAACCTTCTGGCTCCCTGCTGGGCAGTCCACATTACTaGATGTTCTGTATCGGATAT +
Preference number: 4 (lower is better)
Translates to: GICPMFAPIGYKPSGSLLGSPHY*MFCIGY
Trigger: ATATCCGATACAGAACATGCAGTAATGTGGACTGCC...CAGCAGGGAGCCAGAAGGTTTGTAGCCTATTGGTGCAAACATTGGACAAATTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp AGATTAGGCCATTATACTTTGGTCCCCTTTATTGTTGCAATTAGCAACCTTCTAAGCTGGGATTTATACTaGCCTCGGACCAGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: RLGHYTLVPFIVAISNLLSWDLY*PRTSRQ
Trigger: CTGCCGGCTGGTCCGAGGGCAGTATAAATCCCAGCT...TAGAAGGTTGCTAATTGCAACAATAAAGGGGACCAAAGTATAATGGCCTAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR GCA 90 bp CAGATGCCCAATGTAGATTGCACCTCTAATGGTTCCCCATGTCTGGTAGCATGTACTTCCATAGGGAATTaGAACCACAGTATCATCCGA +
Preference number: 4 (lower is better)
Translates to: QMPNVDCTSNGSPCLVACTSIGN*NHSIIR
Trigger: TCGGATGATACTGTGGTTGCAATTCCCTATGGAAGT...ACATGCTACCAGACATGGGGAACCATTAGAGGTGCAATCTACATTGGGCATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR GCA 90 bp GAGCCAAAAAGCTTTGGTGAGATGATTACACTTAGTTCAGAACCCATGAAAGCTCAGCAACCACACGGTTaGTCCTCAGATCGTAGCACT +
Preference number: 4 (lower is better)
Translates to: EPKSFGEMITLSSEPMKAQQPHG*SSDRST
Trigger: AGTGCTACGATCTGAGGAGCAACCGTGTGGTTGCTG...AGCTTTCATGGGTTCTGAACTAAGTGTAATCATCTCACCAAAGCTTTTTGGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR GCA 90 bp GCAAAAATTACTTGGCCAAAGCTGCTCGGCTTAATGAGGATTTTGCCGAAGAGTGACAAGGATCCAAGTTaGACTCCTGAAGCTTGGGTT +
Preference number: 4 (lower is better)
Translates to: AKITWPKLLGLMRILPKSDKDPS*TPEAWV
Trigger: AACCCAAGCTTCAGGAGTGCAACTTGGATCCTTGTC...ACTCTTCGGCAAAATCCTCATTAAGCCGAGCAGCTTTGGCCAAGTAATTTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp CTTAGTTCAGAACCCATGAAAGCTACAACCAGTGAGACACTGCTTTCTTTAAACAAAATGTTGCAGGGCTaGGCGATGGGCATCTTAGGG +
Preference number: 4 (lower is better)
Translates to: LSSEPMKATTSETLLSLNKMLQG*AMGILG
Trigger: CCCTAAGATGCCCATCGCGCAGCCCTGCAACATTTT...GTTTAAAGAAAGCAGTGTCTCACTGGTTGTAGCTTTCATGGGTTCTGAACTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR GCA 90 bp AGTTCAGAACCCATGAAAGCTACAACCAGTGAGACACTGCTTTCTTTAAACAAAGGCAGTCAAAAATGTTaGAGGGCTGCGCGATGGGCA +
Preference number: 4 (lower is better)
Translates to: SSEPMKATTSETLLSLNKGSQKC*RAARWA
Trigger: TGCCCATCGCGCAGCCCTGCAACATTTTTGACTGCC...TTTGTTTAAAGAAAGCAGTGTCTCACTGGTTGTAGCTTTCATGGGTTCTGAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR GCA 90 bp CAGAGTGAGATATTCCACAGGAAAGGCACCTCTATACAATTATCATTTTTAGGGAGAAACTCCTGGCTGTaGCCAGTGAGAGGTCTTGCC +
Preference number: 4 (lower is better)
Translates to: QSEIFHRKGTSIQLSFLGRNSWL*PVRGLA
Trigger: GGCAAGACCTCTCACTGGGCACAGCCAGGAGTTTCT...CCCTAAAAATGATAATTGTATAGAGGTGCCTTTCCTGTGGAATATCTCACTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR GCA 90 bp TGTCCACAGCTCACTAGGTGGGGACACAGATTAATATTGTCTTCCTCTCAAATTAAGGATCTGTCCAGCTaGCAAGATGTGATGCGTCAG +
Preference number: 4 (lower is better)
Translates to: CPQLTRWGHRLILSSSQIKDLSS*QDVMRQ
Trigger: CTGACGCATCACATCTTGGCAGCTGGACAGATCCTT...AATTTGAGAGGAAGACAATATTAATCTGTGTCCCCACCTAGTGAGCTGTGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR GCA 90 bp TTAATCATTCCTGTGGAAACCTTCCCGTCAGCAAGTCAAACTGCTGATATTAATCTGCATGAGCACCCCTaGCTCATTCTGAGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: LIIPVETFPSASQTADINLHEHP*LILSKA
Trigger: TGCCTTGCTCAGAATGAGGCAGGGGTGCTCATGCAG...ATTAATATCAGCAGTTTGACTTGCTGACGGGAAGGTTTCCACAGGAATGATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380538.4
CDS-3UTR GCA 90 bp ACAAACATTAAATGTACATTCATTTCATGCAACGAGCATTCTGCTTCCCACCCATGGCTTTGCTGCAGCTaGACAGGCAGGACGTTGACT +
Preference number: 4 (lower is better)
Translates to: TNIKCTFISCNEHSASHPWLCCS*TGRTLT
Trigger: AGTCAACGTCCTGCCTGTGCAGCTGCAGCAAAGCCA...TGGGTGGGAAGCAGAATGCTCGTTGCATGAAATGAATGTACATTTAATGTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp TGTCCACAGCTCACTAGGTGGGGACACAGATTAATATTGTCTTCCTCTCAAATTATGCAACGAGCATTCTaGTTCCCACCCAAACCTAGG +
Preference number: 4 (lower is better)
Translates to: CPQLTRWGHRLILSSSQIMQRAF*FPPKPR
Trigger: CCTAGGTTTGGGTGGGAAGCAGAATGCTCGTTGCAT...AATTTGAGAGGAAGACAATATTAATCTGTGTCCCCACCTAGTGAGCTGTGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp TTGTCATTTCTGAGGCGGAGGGCACAATGGCTTATTTCATCTTTCTGTTTCCTTCCCTTGAAAGGCAGTTaGTTCCCCGTGCTATTTGAG +
Preference number: 4 (lower is better)
Translates to: LSFLRRRAQWLISSFCFLPLKGS*FPVLFE
Trigger: CTCAAATAGCACGGGGAAGCAACTGCCTTTCAAGGG...AAGGAAACAGAAAGATGAAATAAGCCATTGTGCCCTCCGCCTCAGAAATGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR CCA 90 bp GCATTTGGGTGTTGTTACAACACAGGAATGTGGTTAGAAAGACCCTTTTGCATGATCACCTGCTTCTGGTaGGCAGTCCACATTACTGCA +
Preference number: 4 (lower is better)
Translates to: AFGCCYNTGMWLERPFCMITCFW*AVHITA
Trigger: TGCAGTAATGTGGACTGCCCACCAGAAGCAGGTGAT...CATGCAAAAGGGTCTTTCTAACCACATTCCTGTGTTGTAACAACACCCAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CCA 90 bp GAGATGATTACACTTAGTTCAGAACCCATGAAAGCTACAACCAGTGAGACACTGATCACCTGCTTCTGGTaGGCAGTCCACATTACTGCA +
Preference number: 4 (lower is better)
Translates to: EMITLSSEPMKATTSETLITCFW*AVHITA
Trigger: TGCAGTAATGTGGACTGCCCACCAGAAGCAGGTGAT...CAGTGTCTCACTGGTTGTAGCTTTCATGGGTTCTGAACTAAGTGTAATCATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR CCA 90 bp TTTGTCATTTCTGAGGCGGAGGGCACAATGGCTTATTTCATCTTTCTGTTTCCTATCACCTGCTTCTGGTaGGCAGTCCACATTACTGCA +
Preference number: 4 (lower is better)
Translates to: FVISEAEGTMAYFIFLFPITCFW*AVHITA
Trigger: TGCAGTAATGTGGACTGCCCACCAGAAGCAGGTGAT...AGGAAACAGAAAGATGAAATAAGCCATTGTGCCCTCCGCCTCAGAAATGACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR CCA 90 bp GGGAAGGAGGCAAAAATTACTTGGCCAAAGCTGCTCGGCTTAATGAGGATTTTGTCGCAGCCAACAATTTaGCATAAACCACTGATGCAC +
Preference number: 4 (lower is better)
Translates to: GKEAKITWPKLLGLMRILSQPTI*HKPLMH
Trigger: GTGCATCAGTGGTTTATGCCAAATTGTTGGCTGCGA...CAAAATCCTCATTAAGCCGAGCAGCTTTGGCCAAGTAATTTTTGCCTCCTTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp CCTCAATTACCCTTGAAAGGCAGTTGCTTCCCCGTGCTATTTGAGGGAACATTAGAAATCTGCTGTGAGTaGTCCAGCCATTCTCAGTAT +
Preference number: 4 (lower is better)
Translates to: PQLPLKGSCFPVLFEGTLEICCE*SSHSQY
Trigger: ATACTGAGAATGGCTGGACCACTCACAGCAGATTTC...TAATGTTCCCTCAAATAGCACGGGGAAGCAACTGCCTTTCAAGGGTAATTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR CCA 90 bp ATAAAGAATCATGGGACATGTGAGCAAGTCATGGGATCTCAGATCATCAGGTACGTATCCGTCACTGGCTaGACAAGGATCCAAGTTGCA +
Preference number: 4 (lower is better)
Translates to: IKNHGTCEQVMGSQIIRYVSVTG*TRIQVA
Trigger: TGCAACTTGGATCCTTGTCCAGCCAGTGACGGATAC...GTACCTGATGATCTGAGATCCCATGACTTGCTCACATGTCCCATGATTCTTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CCA 90 bp ACACTTAGTTCAGAACCCATGAAAGCTACAACCAGTGAGACACTGCTTTCTTTAGTGTGCATTCCTCGATaGTCGATGCAGAGGACCACA +
Preference number: 4 (lower is better)
Translates to: TLSSEPMKATTSETLLSLVCIPR*SMQRTT
Trigger: TGTGGTCCTCTGCATCGACCATCGAGGAATGCACAC...TAAAGAAAGCAGTGTCTCACTGGTTGTAGCTTTCATGGGTTCTGAACTAAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR CCA 90 bp TGGTGGGAAATCAGAGAATTGAGTTTATCTGGAGCAAATGCGACAACATTAAGCGTGGGGCTTTGTTTTTaGGCTACAGCCTCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: WWEIRELSLSGANATTLSVGLCF*ATASCV
Trigger: CACACAGGAGGCTGTAGCCCAAAAACAAAGCCCCAC...GCTTAATGTTGTCGCATTTGCTCCAGATAAACTCAATTCTCTGATTTCCCACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CCA 90 bp GCATTTGGGTGTTGTTACAACACAGGAATGTGGTTAGAAAGACCCTTTTGCATGAGCTTGTTTGAACCATaGCAACTTGGCCTCGACTGG +
Preference number: 4 (lower is better)
Translates to: AFGCCYNTGMWLERPFCMSLFEP*QLGLDW
Trigger: CCAGTCGAGGCCAAGTTGCCATGGTTCAAACAAGCT...CATGCAAAAGGGTCTTTCTAACCACATTCCTGTGTTGTAACAACACCCAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CCA 90 bp AGATTAGGCCATTATACTTTGGTCCCCTTTATTGTTGCAATTAGCAACCTTCTAGCTGGGATGCTGGCTTaGGCCCTTCACACTCGTCAA +
Preference number: 4 (lower is better)
Translates to: RLGHYTLVPFIVAISNLLAGMLA*ALHTRQ
Trigger: TTGACGAGTGTGAAGGGCCCAAGCCAGCATCCCAGC...TAGAAGGTTGCTAATTGCAACAATAAAGGGGACCAAAGTATAATGGCCTAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CCA 90 bp TCAACAACTGTTCTTGTCTGTGAGTCAACAAAAGGGTCACAGGATAACCTAACCTGTTGGCTTGACAGCTaGCTGGTGGGAAATCAGAGA +
Preference number: 4 (lower is better)
Translates to: STTVLVCESTKGSQDNLTCWLDS*LVGNQR
Trigger: TCTCTGATTTCCCACCAGCCAGCTGTCAAGCCAACA...GGTTAGGTTATCCTGTGACCCTTTTGTTGACTCACAGACAAGAACAGTTGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CCA 90 bp TTCCTGTGGAAACCTTCCCGTCAGCAAGTCAAACTGCTGATATTAATGAGCATGTGTGGCAGTGACAATTaGCTGACCACCATGAAACCA +
Preference number: 4 (lower is better)
Translates to: FLWKPSRQQVKLLILMSMCGSDN*LTTMKP
Trigger: TGGTTTCATGGTGGTCAGCCAATTGTCACTGCCACA...CATGCTCATTAATATCAGCAGTTTGACTTGCTGACGGGAAGGTTTCCACAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380538.4
CDS-3UTR CCA 90 bp GTTTGTGATAGTGCGCTTCTAGGAAAGACACAGGAATTTGTCCAATGTTTGCACATGCCATCCCGTGTCTaGCAGAAGACTTGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: VCDSALLGKTQEFVQCLHMPSRV*QKTCLC
Trigger: ACACAGACAAGTCTTCTGCCAGACACGGGATGGCAT...GTGCAAACATTGGACAAATTCCTGTGTCTTTCCTAGAAGCGCACTATCACAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CCA 90 bp TTGTGTTTTAGAGGAGAAAGTGCCTCCTTCCACATTAGCCAGCAGCCTTCATTGCAGCGAGATTTAAACTaGCTGAGTTGGCAGAGTTTC +
Preference number: 4 (lower is better)
Translates to: LCFRGESASFHISQQPSLQRDLN*LSWQSF
Trigger: GAAACTCTGCCAACTCAGCCAGTTTAAATCTCGCTG...CAATGAAGGCTGCTGGCTAATGTGGAAGGAGGCACTTTCTCCTCTAAAACACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp TTTAAACTGGCTGAGTTGGCAGAGTTTCAGCTGTTTCACCTTCTCGCAGTACCTGAGGCAAAAATTACTTaGCCAAAGCTGCTCGGCTTA +
Preference number: 4 (lower is better)
Translates to: FKLAELAEFQLFHLLAVPEAKIT*PKLLGL
Trigger: TAAGCCGAGCAGCTTTGGCCAAGTAATTTTTGCCTC...AGGTACTGCGAGAAGGTGAAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542621.5
CDS-3UTR CCA 90 bp AGGAGCGGGCCAGGCTATGTTACAGTTCAGGAAGGGTATAAAAGGACATTAATCTCATCGAATCTCTCCTaGTTTCAGCTGCTCCTTATG +
Preference number: 4 (lower is better)
Translates to: RSGPGYVTVQEGYKRTLISSNLS*FQLLLM
Trigger: CATAAGGAGCAGCTGAAACCAGGAGAGATTCGATGA...GATTAATGTCCTTTTATACCCTTCCTGAACTGTAACATAGCCTGGCCCGCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380538.4
CDS-3UTR CCA 90 bp CCTCAATTACCCTTGAAAGGCAGTTGCTTCCCCGTGCTATTTGAGGGAACATTAAGGCGGAGGGCACAATaGCTTATTTCATCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: PQLPLKGSCFPVLFEGTLRRRAQ*LISSFC
Trigger: ACAGAAAGATGAAATAAGCCATTGTGCCCTCCGCCT...TAATGTTCCCTCAAATAGCACGGGGAAGCAACTGCCTTTCAAGGGTAATTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR TCA 90 bp TTTGGTGAGATGATTACACTTAGTTCAGAACCCATGAAAGCTACAACCAGTGAGACTGGCCATGGTGCTTaGCATCATTATGAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: FGEMITLSSEPMKATTSETGHGA*HHYELS
Trigger: GCTCAGCTCATAATGATGTCAAGCACCATGGCCAGT...CTCACTGGTTGTAGCTTTCATGGGTTCTGAACTAAGTGTAATCATCTCACCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR TCA 90 bp ATTGAGTTTATCTGGAGCAAATGCGACAACATTAAGCTCAACAACTGTTCTTGTGGCTTGGCACTTGAGTaGACATGGGTTGTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: IEFIWSKCDNIKLNNCSCGLALE*TWVVRV
Trigger: GACCCTGACAACCCATGTTCACTCAAGTGCCAAGCC...ACAAGAACAGTTGTTGAGCTTAATGTTGTCGCATTTGCTCCAGATAAACTCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR TCA 90 bp GTGACACTCAAGGAAAGAAAAATAACTCTAGTCTACTTTTCCTTCGCACAATACGGCTTGGCACTTGAGTaGACATGGGTTGTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: VTLKERKITLVYFSFAQYGLALE*TWVVRV
Trigger: GACCCTGACAACCCATGTTCACTCAAGTGCCAAGCC...GTATTGTGCGAAGGAAAAGTAGACTAGAGTTATTTTTCTTTCCTTGAGTGTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431052.6
CDS-3UTR TCA 90 bp GAGCCAAAAAGCTTTGGTGAGATGATTACACTTAGTTCAGAACCCATGAAAGCTCTTTGGCTTGGCACTTaGGTGAACATGGGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: EPKSFGEMITLSSEPMKALWLGT*VNMGCQ
Trigger: CTGACAACCCATGTTCACTCAAGTGCCAAGCCAAAG...AGCTTTCATGGGTTCTGAACTAAGTGTAATCATCTCACCAAAGCTTTTTGGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR TCA 90 bp GCTCTATCATCAAAGCAGCTTTTACAGATTCGGGATCATTCATTCAGCCTCAATTCCTCCACAGGTTGCTaGGCAAGGAAAGAAATCCGT +
Preference number: 4 (lower is better)
Translates to: ALSSKQLLQIRDHSFSLNSSTGC*ARKEIR
Trigger: ACGGATTTCTTTCCTTGCTCAGCAACCTGTGGAGGA...ATTGAGGCTGAATGAATGATCCCGAATCTGTAAAAGCTGCTTTGATGATAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR TCA 90 bp GATCTCAGATCATCAGGTACAACCAGTTCACTTTGCAGATGTGGAAACATAAAGTCCAAGTTGCACTCCTaGAGCTTGGGTTTGGGTTTG +
Preference number: 4 (lower is better)
Translates to: DLRSSGTTSSLCRCGNIKSKLHS*SLGLGL
Trigger: CAAACCCAAACCCAAGCTTCAGGAGTGCAACTTGGA...CTTTATGTTTCCACATCTGCAAAGTGAACTGGTTGTACCTGATGATCTGAGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR TCA 90 bp GAGCCAAAAAGCTTTGGTGAGATGATTACACTTAGTTCAGAACCCATGAAAGCTTCCAAGTTGCACTCCTaGAGCTTGGGTTTGGGTTTG +
Preference number: 4 (lower is better)
Translates to: EPKSFGEMITLSSEPMKASKLHS*SLGLGL
Trigger: CAAACCCAAACCCAAGCTTCAGGAGTGCAACTTGGA...AGCTTTCATGGGTTCTGAACTAAGTGTAATCATCTCACCAAAGCTTTTTGGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR TCA 90 bp GATCTCAGATCATCAGGTACAACCAGTTCACTTTGCAGATGTGGAAACATAAAGTTTCCACTCTTCCACTaGAGTGACATGCCCCTGGAT +
Preference number: 4 (lower is better)
Translates to: DLRSSGTTSSLCRCGNIKFPLFH*SDMPLD
Trigger: ATCCAGGGGCATGTCACTTCAGTGGAAGAGTGGAAA...CTTTATGTTTCCACATCTGCAAAGTGAACTGGTTGTACCTGATGATCTGAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR TCA 90 bp AGCTTTGGTGAGATGATTACACTTAGTTCAGAACCCATGAAAGCTACAACCAGTTTTCCACTCTTCCACTaGAGTGACATGCCCCTGGAT +
Preference number: 4 (lower is better)
Translates to: SFGEMITLSSEPMKATTSFPLFH*SDMPLD
Trigger: ATCCAGGGGCATGTCACTTCAGTGGAAGAGTGGAAA...ACTGGTTGTAGCTTTCATGGGTTCTGAACTAAGTGTAATCATCTCACCAAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR TCA 90 bp CTATTCGTTTTGGTGCTCAAAGAAGGGTTTAGGGACCACGAGTCCCAGCAGTTTATTTTCTGTATACATTaGACACCAGGAGAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: LFVLVLKEGFRDHESQQFIFCIH*TPGEGK
Trigger: CTTCCCTTCTCCTGGTGTTCAATGTATACAGAAAAT...AAACTGCTGGGACTCGTGGTCCCTAAACCCTTCTTTGAGCACCAAAACGAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR TCA 90 bp ACAAACATTAAATGTACATTCATTTCATGCAACGAGCATTCTGCTTCCCACCCACTCTTTCTAGGTCTTTaGGACCCAGGTTTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: TNIKCTFISCNEHSASHPLFLGL*DPGLGG
Trigger: CCCTCCCAAACCTGGGTCTCAAAGACCTAGAAAGAG...TGGGTGGGAAGCAGAATGCTCGTTGCATGAAATGAATGTACATTTAATGTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR GCA 90 bp TGTTGTTACAACACAGGAATGTGGTTAGAAAGACCCTTTTGCATGTTTTTCAAACAGTGTGCCAGGAGTTaGCCGACGGCAGCATTCCAT +
Preference number: 4 (lower is better)
Translates to: CCYNTGMWLERPFCMFFKQCARS*PTAAFH
Trigger: ATGGAATGCTGCCGTCGGGCAACTCCTGGCACACTG...TTTGAAAAACATGCAAAAGGGTCTTTCTAACCACATTCCTGTGTTGTAACAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR GCA 90 bp AGTCTACTTTTCCTTCGCACAATACAACACTTGGTACTTTTCACTGAAATCATACTTCACAGCTCTTGCTaGTCAGGCAGCGCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: SLLFLRTIQHLVLFTEIILHSSC*SGSASE
Trigger: CTCTGAGGCGCTGCCTGAGCAGCAAGAGCTGTGAAG...TATGATTTCAGTGAAAAGTACCAAGTGTTGTATTGTGCGAAGGAAAAGTAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431052.6
CDS-3UTR GCA 90 bp TTTCAGGTTCATTATCGTTTTGGTGGAGGTGTTGTTCCCTGGCTGTTTAGTGGGGGCAGTCCACATTACTaGATGTTCTGTATCGGATAT +
Preference number: 4 (lower is better)
Translates to: FQVHYRFGGGVVPWLFSGGSPHY*MFCIGY
Trigger: ATATCCGATACAGAACATGCAGTAATGTGGACTGCC...CCCACTAAACAGCCAGGGAACAACACCTCCACCAAAACGATAATGAACCTGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380570.8
CDS-3UTR GCA 90 bp TGGTGGGAAATCAGAGAATTGAGTTTATCTGGAGCAAATGCGACAACATTAAGCTGGACCCATCTCCGTTaGAGACCCCACAGTTATCTT +
Preference number: 4 (lower is better)
Translates to: WWEIRELSLSGANATTLSWTHLR*RPHSYL
Trigger: AAGATAACTGTGGGGTCTGCAACGGAGATGGGTCCA...GCTTAATGTTGTCGCATTTGCTCCAGATAAACTCAATTCTCTGATTTCCCACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR GCA 90 bp AGCTTTGGTGAGATGATTACACTTAGTTCAGAACCCATGAAAGCTACAACCAGTTGGACCCATCTCCGTTaGAGACCCCACAGTTATCTT +
Preference number: 4 (lower is better)
Translates to: SFGEMITLSSEPMKATTSWTHLR*RPHSYL
Trigger: AAGATAACTGTGGGGTCTGCAACGGAGATGGGTCCA...ACTGGTTGTAGCTTTCATGGGTTCTGAACTAAGTGTAATCATCTCACCAAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR GCA 90 bp TTCATTCAGCCTCAATTACCCTTGAAAGGCAGTTGCTTCCCCGTGCTATTTGAGATCATCCGATTTGGTTaGGGAGAGCTGGGATTTATA +
Preference number: 4 (lower is better)
Translates to: FIQPQLPLKGSCFPVLFEIIRFG*GELGFI
Trigger: TATAAATCCCAGCTCTCCGCAACCAAATCGGATGAT...CTCAAATAGCACGGGGAAGCAACTGCCTTTCAAGGGTAATTGAGGCTGAATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR GCA 90 bp ATAAAGAATCATGGGACATGTGAGCAAGTCATGGGATCTCAGATCATCAGGTACGACAAGGATCCAAGTTaGACTCCTGAAGCTTGGGTT +
Preference number: 4 (lower is better)
Translates to: IKNHGTCEQVMGSQIIRYDKDPS*TPEAWV
Trigger: AACCCAAGCTTCAGGAGTGCAACTTGGATCCTTGTC...GTACCTGATGATCTGAGATCCCATGACTTGCTCACATGTCCCATGATTCTTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR GCA 90 bp GAGATGATTACACTTAGTTCAGAACCCATGAAAGCTACAACCAGTGAGACACTGGACAAGGATCCAAGTTaGACTCCTGAAGCTTGGGTT +
Preference number: 4 (lower is better)
Translates to: EMITLSSEPMKATTSETLDKDPS*TPEAWV
Trigger: AACCCAAGCTTCAGGAGTGCAACTTGGATCCTTGTC...CAGTGTCTCACTGGTTGTAGCTTTCATGGGTTCTGAACTAAGTGTAATCATCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR GCA 90 bp TTTGTCATTTCTGAGGCGGAGGGCACAATGGCTTATTTCATCTTTCTGTTTCCTGACAAGGATCCAAGTTaGACTCCTGAAGCTTGGGTT +
Preference number: 4 (lower is better)
Translates to: FVISEAEGTMAYFIFLFPDKDPS*TPEAWV
Trigger: AACCCAAGCTTCAGGAGTGCAACTTGGATCCTTGTC...AGGAAACAGAAAGATGAAATAAGCCATTGTGCCCTCCGCCTCAGAAATGACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR GCA 90 bp TTTGACTCTTGGATGAGATTAGGCCATTATACTTTGGTCCCCTTTATTGTTGCATTCCTCGATGGTCGATaGAGAGGACCACACGGTATC +
Preference number: 4 (lower is better)
Translates to: FDSWMRLGHYTLVPFIVAFLDGR*RGPHGI
Trigger: GATACCGTGTGGTCCTCTGCATCGACCATCGAGGAA...TGCAACAATAAAGGGGACCAAAGTATAATGGCCTAATCTCATCCAAGAGTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR GCA 90 bp TCAGAACCCATGAAAGCTACAACCAGTGAGACACTGCTTTCTTTAAACAAAACATTCCTCGATGGTCGATaGAGAGGACCACACGGTATC +
Preference number: 4 (lower is better)
Translates to: SEPMKATTSETLLSLNKTFLDGR*RGPHGI
Trigger: GATACCGTGTGGTCCTCTGCATCGACCATCGAGGAA...TGTTTTGTTTAAAGAAAGCAGTGTCTCACTGGTTGTAGCTTTCATGGGTTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR GCA 90 bp TCAGAACCCATGAAAGCTACAACCAGTGAGACACTGCTTTCTTTAAACAAAACACTACAGCCTCCTGTGTaGATTCCTCGATGGTCGATG +
Preference number: 4 (lower is better)
Translates to: SEPMKATTSETLLSLNKTLQPPV*IPRWSM
Trigger: CATCGACCATCGAGGAATGCACACAGGAGGCTGTAG...TGTTTTGTTTAAAGAAAGCAGTGTCTCACTGGTTGTAGCTTTCATGGGTTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR GCA 90 bp GAGATGATTACACTTAGTTCAGAACCCATGAAAGCTACAACCAGTGAGACACTGAGGGAGTGGGTACGATaGATTCCTCTTTTATGTGGG +
Preference number: 4 (lower is better)
Translates to: EMITLSSEPMKATTSETLREWVR*IPLLCG
Trigger: CCCACATAAAAGAGGAATGCATCGTACCCACTCCCT...CAGTGTCTCACTGGTTGTAGCTTTCATGGGTTCTGAACTAAGTGTAATCATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR GCA 90 bp ATTGAGTTTATCTGGAGCAAATGCGACAACATTAAGCTCAACAACTGTTCTTGTCAGGAATTTCCCCGCTaGATGGGCCTGCATAACAGG +
Preference number: 4 (lower is better)
Translates to: IEFIWSKCDNIKLNNCSCQEFPR*MGLHNR
Trigger: CCTGTTATGCAGGCCCATGCAGCGGGGAAATTCCTG...ACAAGAACAGTTGTTGAGCTTAATGTTGTCGCATTTGCTCCAGATAAACTCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR GCA 90 bp GAGCCAAAAAGCTTTGGTGAGATGATTACACTTAGTTCAGAACCCATGAAAGCTCCATGCTTGGATCCTTaGCGGAATCAGAATCGGACA +
Preference number: 4 (lower is better)
Translates to: EPKSFGEMITLSSEPMKAPCLDP*RNQNRT
Trigger: TGTCCGATTCTGATTCCGGCAAGGATCCAAGCATGG...AGCTTTCATGGGTTCTGAACTAAGTGTAATCATCTCACCAAAGCTTTTTGGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR GCA 90 bp AGCCAGCAGCCTTCATTGTCTTGTGGTGCTGCTGAGTTGCAATTCACAGAACAATGTACATTCATTTCATaGAACGAGCATTCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: SQQPSLSCGAAELQFTEQCTFIS*NEHSAS
Trigger: GGAAGCAGAATGCTCGTTGCATGAAATGAATGTACA...TTGTTCTGTGAATTGCAACTCAGCAGCACCACAAGACAATGAAGGCTGCTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp ATAAAGAATCATGGGACATGTGAGCAAGTCATGGGATCTCAGATCATCAGGTACGAAATCACCTGCTTCTaGTGGGCAGTCCACATTACT +
Preference number: 4 (lower is better)
Translates to: IKNHGTCEQVMGSQIIRYEITCF*WAVHIT
Trigger: AGTAATGTGGACTGCCCACCAGAAGCAGGTGATTTC...GTACCTGATGATCTGAGATCCCATGACTTGCTCACATGTCCCATGATTCTTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CCA 90 bp TTTGTCATTTCTGAGGCGGAGGGCACAATGGCTTATTTCATCTTTCTGTTTCCTGAAATCACCTGCTTCTaGTGGGCAGTCCACATTACT +
Preference number: 4 (lower is better)
Translates to: FVISEAEGTMAYFIFLFPEITCF*WAVHIT
Trigger: AGTAATGTGGACTGCCCACCAGAAGCAGGTGATTTC...AGGAAACAGAAAGATGAAATAAGCCATTGTGCCCTCCGCCTCAGAAATGACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR CCA 90 bp TTTGTCATTTCTGAGGCGGAGGGCACAATGGCTTATTTCATCTTTCTGTTTCCTGTTGTTCCTTTGGCTTaGCACTTGAGTGAACATGGG +
Preference number: 4 (lower is better)
Translates to: FVISEAEGTMAYFIFLFPVVPLA*HLSEHG
Trigger: CCCATGTTCACTCAAGTGCCAAGCCAAAGGAACAAC...AGGAAACAGAAAGATGAAATAAGCCATTGTGCCCTCCGCCTCAGAAATGACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR CCA 90 bp AGTTCAGAACCCATGAAAGCTACAACCAGTGAGACACTGCTTTCTTTAAACAAATTGGTTGCGGAGAGCTaGGATTTATACTGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: SSEPMKATTSETLLSLNKLVAES*DLYCPR
Trigger: CCGAGGGCAGTATAAATCCCAGCTCTCCGCAACCAA...TTTGTTTAAAGAAAGCAGTGTCTCACTGGTTGTAGCTTTCATGGGTTCTGAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR CCA 90 bp TTCATTCAGCCTCAATTACCCTTGAAAGGCAGTTGCTTCCCCGTGCTATTTGAGTCCCCTGGAGGGTTTTaGTTTCCAGATATAAGTGAT +
Preference number: 4 (lower is better)
Translates to: FIQPQLPLKGSCFPVLFESPGGF*FPDISD
Trigger: ATCACTTATATCTGGAAACCAAAACCCTCCAGGGGA...CTCAAATAGCACGGGGAAGCAACTGCCTTTCAAGGGTAATTGAGGCTGAATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR CCA 90 bp GAGCCAAAAAGCTTTGGTGAGATGATTACACTTAGTTCAGAACCCATGAAAGCTGTATCCGTCACTGGCTaGACAAGGATCCAAGTTGCA +
Preference number: 4 (lower is better)
Translates to: EPKSFGEMITLSSEPMKAVSVTG*TRIQVA
Trigger: TGCAACTTGGATCCTTGTCCAGCCAGTGACGGATAC...AGCTTTCATGGGTTCTGAACTAAGTGTAATCATCTCACCAAAGCTTTTTGGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR CCA 90 bp GAGCCAAAAAGCTTTGGTGAGATGATTACACTTAGTTCAGAACCCATGAAAGCTGCTTGTATCCGTCACTaGCTGGACAAGGATCCAAGT +
Preference number: 4 (lower is better)
Translates to: EPKSFGEMITLSSEPMKAACIRH*LDKDPS
Trigger: ACTTGGATCCTTGTCCAGCCAGTGACGGATACAAGC...AGCTTTCATGGGTTCTGAACTAAGTGTAATCATCTCACCAAAGCTTTTTGGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR CCA 90 bp TCAGAACCCATGAAAGCTACAACCAGTGAGACACTGCTTTCTTTAAACAAAACAGTGGGGCTTTGTTTTTaGGCTACAGCCTCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: SEPMKATTSETLLSLNKTVGLCF*ATASCV
Trigger: CACACAGGAGGCTGTAGCCCAAAAACAAAGCCCCAC...TGTTTTGTTTAAAGAAAGCAGTGTCTCACTGGTTGTAGCTTTCATGGGTTCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR CCA 90 bp ACACTTAGTTCAGAACCCATGAAAGCTACAACCAGTGAGACACTGCTTTCTTTAAGCTTGTTTGAACCATaGCAACTTGGCCTCGACTGG +
Preference number: 4 (lower is better)
Translates to: TLSSEPMKATTSETLLSLSLFEP*QLGLDW
Trigger: CCAGTCGAGGCCAAGTTGCCATGGTTCAAACAAGCT...TAAAGAAAGCAGTGTCTCACTGGTTGTAGCTTTCATGGGTTCTGAACTAAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR CCA 90 bp GTTTGTGATAGTGCGCTTCTAGGAAAGACACAGGAATTTGTCCAATGTTTGCACCCCATCTGTCTCGTCTaGGTTGAACTCAGGAATTTC +
Preference number: 4 (lower is better)
Translates to: VCDSALLGKTQEFVQCLHPICLV*VELRNF
Trigger: GAAATTCCTGAGTTCAACCCAGACGAGACAGATGGG...GTGCAAACATTGGACAAATTCCTGTGTCTTTCCTAGAAGCGCACTATCACAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp GATCTCAGATCATCAGGTACAACCAGTTCACTTTGCAGATGTGGAAACATAAAGGGCTTGACAGCTGGCTaGTGGGAAATCAGAGAATTG +
Preference number: 4 (lower is better)
Translates to: DLRSSGTTSSLCRCGNIKGLTAG*WEIREL
Trigger: CAATTCTCTGATTTCCCACCAGCCAGCTGTCAAGCC...CTTTATGTTTCCACATCTGCAAAGTGAACTGGTTGTACCTGATGATCTGAGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CCA 90 bp AGATTAGGCCATTATACTTTGGTCCCCTTTATTGTTGCAATTAGCAACCTTCTAGACCCAAGAAACTCCTaGCTGTGCCCAGTGAGAGGT +
Preference number: 4 (lower is better)
Translates to: RLGHYTLVPFIVAISNLLDPRNS*LCPVRG
Trigger: ACCTCTCACTGGGCACAGCCAGGAGTTTCTTGGGTC...TAGAAGGTTGCTAATTGCAACAATAAAGGGGACCAAAGTATAATGGCCTAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CCA 90 bp CTTAGTTCAGAACCCATGAAAGCTACAACCAGTGAGACACTGCTTTCTTTAAACGCAGCATTCCATGCTTaGATCCTTGCCGGAATCAGA +
Preference number: 4 (lower is better)
Translates to: LSSEPMKATTSETLLSLNAAFHA*ILAGIR
Trigger: TCTGATTCCGGCAAGGATCCAAGCATGGAATGCTGC...GTTTAAAGAAAGCAGTGTCTCACTGGTTGTAGCTTTCATGGGTTCTGAACTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR CCA 90 bp TTCATTCAGCCTCAATTACCCTTGAAAGGCAGTTGCTTCCCCGTGCTATTTGAGGATGAGAGGGAAGAGTaGACTTACTCTCCTAATGAA +
Preference number: 4 (lower is better)
Translates to: FIQPQLPLKGSCFPVLFEDEREE*TYSPNE
Trigger: TTCATTAGGAGAGTAAGTCCACTCTTCCCTCTCATC...CTCAAATAGCACGGGGAAGCAACTGCCTTTCAAGGGTAATTGAGGCTGAATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR CCA 90 bp CTTGTCCCACCTAAGCTAATTCACATGCCAGAGCATGAAGCCTTCTACATTTTCTGTGTGTCTTACATTTaGTTGCGGAGAGCTGGGATT +
Preference number: 4 (lower is better)
Translates to: LVPPKLIHMPEHEAFYIFCVSYI*LRRAGI
Trigger: AATCCCAGCTCTCCGCAACCAAATGTAAGACACACA...GAAAATGTAGAAGGCTTCATGCTCTGGCATGTGAATTAGCTTAGGTGGGACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380570.8
CDS-3UTR TCA 90 bp GCTCTATCATCAAAGCAGCTTTTACAGATTCGGGATCATTCATTCAGCCTCAATGACATCATTATGAGCTaGGCATTGCTGAGCTCGGAA +
Preference number: 4 (lower is better)
Translates to: ALSSKQLLQIRDHSFSLNDIIMS*ALLSSE
Trigger: TTCCGAGCTCAGCAATGCTCAGCTCATAATGATGTC...ATTGAGGCTGAATGAATGATCCCGAATCTGTAAAAGCTGCTTTGATGATAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR TCA 90 bp TTGTCATTTCTGAGGCGGAGGGCACAATGGCTTATTTCATCTTTCTGTTTCCTTTGGGTTGATAGAAGATaGACTGGACTGTACTGTCAG +
Preference number: 4 (lower is better)
Translates to: LSFLRRRAQWLISSFCFLWVDRR*TGLYCQ
Trigger: CTGACAGTACAGTCCAGTTCATCTTCTATCAACCCA...AAGGAAACAGAAAGATGAAATAAGCCATTGTGCCCTCCGCCTCAGAAATGACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR TCA 90 bp AAAAGCTTTGGTGAGATGATTACACTTAGTTCAGAACCCATGAAAGCTACAACCTCCTCCACAGGTTGCTaGGCAAGGAAAGAAATCCGT +
Preference number: 4 (lower is better)
Translates to: KSFGEMITLSSEPMKATTSSTGC*ARKEIR
Trigger: ACGGATTTCTTTCCTTGCTCAGCAACCTGTGGAGGA...GGTTGTAGCTTTCATGGGTTCTGAACTAAGTGTAATCATCTCACCAAAGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR TCA 90 bp AGCTTTGGTGAGATGATTACACTTAGTTCAGAACCCATGAAAGCTACAACCAGTCCTTCTTCTAGCTCTTaGGCTTGTTTGAACCATGGC +
Preference number: 4 (lower is better)
Translates to: SFGEMITLSSEPMKATTSPSSSS*ACLNHG
Trigger: GCCATGGTTCAAACAAGCTCAAGAGCTAGAAGAAGG...ACTGGTTGTAGCTTTCATGGGTTCTGAACTAAGTGTAATCATCTCACCAAAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR TCA 90 bp CATCAGAGTGAGATATTCCACAGGAAAGGCACCTCTATACAATTATCATTTTTAACTCGGAGCACTTGGTaGACCCCTCATACTCCCAGT +
Preference number: 4 (lower is better)
Translates to: HQSEIFHRKGTSIQLSFLTRSTW*TPHTPS
Trigger: ACTGGGAGTATGAGGGGTTCACCAAGTGCTCCGAGT...TAAAAATGATAATTGTATAGAGGTGCCTTTCCTGTGGAATATCTCACTCTGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR TCA 90 bp ATTGAGTTTATCTGGAGCAAATGCGACAACATTAAGCTCAACAACTGTTCTTGTCACAGAGCTAGTTGGTaGCAGCAGGATGAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: IEFIWSKCDNIKLNNCSCHRASW*QQDEKP
Trigger: TGGCTTCTCATCCTGCTGTCACCAACTAGCTCTGTG...ACAAGAACAGTTGTTGAGCTTAATGTTGTCGCATTTGCTCCAGATAAACTCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR TCA 90 bp TATGTTACAGTTCAGGAAGGGTATAAAAGGACATTAATCATTCCTGTGGAAACCAAGATGCCTTCTGCATaGGCACCCCTGCCTCATTCT +
Preference number: 4 (lower is better)
Translates to: YVTVQEGYKRTLIIPVETKMPSA*APLPHS
Trigger: AGAATGAGGCAGGGGTGCTCATGCAGAAGGCATCTT...GGTTTCCACAGGAATGATTAATGTCCTTTTATACCCTTCCTGAACTGTAACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380538.4
CDS-3UTR GCA 90 bp GCATTTGGGTGTTGTTACAACACAGGAATGTGGTTAGAAAGACCCTTTTGCATGCTTGACAATGAAATCTaGTGTGAGTGGTCCAGCCAT +
Preference number: 4 (lower is better)
Translates to: AFGCCYNTGMWLERPFCMLDNEI*CEWSSH
Trigger: ATGGCTGGACCACTCACAGCAGATTTCATTGTCAAG...CATGCAAAAGGGTCTTTCTAACCACATTCCTGTGTTGTAACAACACCCAAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR GCA 90 bp CATCAGAGTGAGATATTCCACAGGAAAGGCACCTCTATACAATTATCATTTTTAGGCAGTCAAAAATGTTaGAGGGCTGCGCGATGGGCA +
Preference number: 4 (lower is better)
Translates to: HQSEIFHRKGTSIQLSFLGSQKC*RAARWA
Trigger: TGCCCATCGCGCAGCCCTGCAACATTTTTGACTGCC...TAAAAATGATAATTGTATAGAGGTGCCTTTCCTGTGGAATATCTCACTCTGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR GCA 90 bp CATCAGAGTGAGATATTCCACAGGAAAGGCACCTCTATACAATTATCATTTTTAAGCTCGTCGAAATCCTaGAGGCCACCAAAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: HQSEIFHRKGTSIQLSFLSSSKS*RPPKSP
Trigger: TGGGCTCTTTGGTGGCCTGCAGGATTTCGACGAGCT...TAAAAATGATAATTGTATAGAGGTGCCTTTCCTGTGGAATATCTCACTCTGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR GCA 90 bp TGGTGGGAAATCAGAGAATTGAGTTTATCTGGAGCAAATGCGACAACATTAAGCGTCGATACTGCTTCTTaGTGGGCAGGGATCCAAATT +
Preference number: 4 (lower is better)
Translates to: WWEIRELSLSGANATTLSVDTAS*WAGIQI
Trigger: AATTTGGATCCCTGCCCAGCAAGAAGCAGTATCGAC...GCTTAATGTTGTCGCATTTGCTCCAGATAAACTCAATTCTCTGATTTCCCACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR GCA 90 bp TCAGAACCCATGAAAGCTACAACCAGTGAGACACTGCTTTCTTTAAACAAAACACTAACACTCCAGTCCTaGCTATCAGCTTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: SEPMKATTSETLLSLNKTLTLQS*LSASIS
Trigger: GCTGATGGAAGCTGATAGGCAGGACTGGAGTGTTAG...TGTTTTGTTTAAAGAAAGCAGTGTCTCACTGGTTGTAGCTTTCATGGGTTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR GCA 90 bp TTAATCATTCCTGTGGAAACCTTCCCGTCAGCAAGTCAAACTGCTGATATTAATCCCACCGCTAAGGTTTaGAACTTGAAGGATCTGTCC +
Preference number: 4 (lower is better)
Translates to: LIIPVETFPSASQTADINPTAKV*NLKDLS
Trigger: GGACAGATCCTTCAAGTTGCAAACCTTAGCGGTGGG...ATTAATATCAGCAGTTTGACTTGCTGACGGGAAGGTTTCCACAGGAATGATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380538.4
CDS-3UTR GCA 90 bp TTGTCATTTCTGAGGCGGAGGGCACAATGGCTTATTTCATCTTTCTGTTTCCTTGCAGTTGCTTCCCCGTaGTATTTGAGGGAACATTAT +
Preference number: 4 (lower is better)
Translates to: LSFLRRRAQWLISSFCFLAVASP*YLREHY
Trigger: ATAATGTTCCCTCAAATAGCACGGGGAAGCAACTGC...AAGGAAACAGAAAGATGAAATAAGCCATTGTGCCCTCCGCCTCAGAAATGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR CCA 90 bp CTTAGTTCAGAACCCATGAAAGCTACAACCAGTGAGACACTGCTTTCTTTAAACGAAATCACCTGCTTCTaGTGGGCAGTCCACATTACT +
Preference number: 4 (lower is better)
Translates to: LSSEPMKATTSETLLSLNEITCF*WAVHIT
Trigger: AGTAATGTGGACTGCCCACCAGAAGCAGGTGATTTC...GTTTAAAGAAAGCAGTGTCTCACTGGTTGTAGCTTTCATGGGTTCTGAACTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR CCA 90 bp GATCTCAGATCATCAGGTACAACCAGTTCACTTTGCAGATGTGGAAACATAAAGGTTGTTCCTTTGGCTTaGCACTTGAGTGAACATGGG +
Preference number: 4 (lower is better)
Translates to: DLRSSGTTSSLCRCGNIKVVPLA*HLSEHG
Trigger: CCCATGTTCACTCAAGTGCCAAGCCAAAGGAACAAC...CTTTATGTTTCCACATCTGCAAAGTGAACTGGTTGTACCTGATGATCTGAGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CCA 90 bp ATGATTACACTTAGTTCAGAACCCATGAAAGCTACAACCAGTGAGACACTGCTTGTTGTTCCTTTGGCTTaGCACTTGAGTGAACATGGG +
Preference number: 4 (lower is better)
Translates to: MITLSSEPMKATTSETLLVVPLA*HLSEHG
Trigger: CCCATGTTCACTCAAGTGCCAAGCCAAAGGAACAAC...AAGCAGTGTCTCACTGGTTGTAGCTTTCATGGGTTCTGAACTAAGTGTAATCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR CCA 90 bp TTGTCATTTCTGAGGCGGAGGGCACAATGGCTTATTTCATCTTTCTGTTTCCTTTCGCAGCCAACAATTTaGCATAAACCACTGATGCAC +
Preference number: 4 (lower is better)
Translates to: LSFLRRRAQWLISSFCFLSQPTI*HKPLMH
Trigger: GTGCATCAGTGGTTTATGCCAAATTGTTGGCTGCGA...AAGGAAACAGAAAGATGAAATAAGCCATTGTGCCCTCCGCCTCAGAAATGACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR CCA 90 bp GATCTCAGATCATCAGGTACAACCAGTTCACTTTGCAGATGTGGAAACATAAAGCAGTATCATCCGATTTaGTTGCGGAGAGCTGGGATT +
Preference number: 4 (lower is better)
Translates to: DLRSSGTTSSLCRCGNIKQYHPI*LRRAGI
Trigger: AATCCCAGCTCTCCGCAACCAAATCGGATGATACTG...CTTTATGTTTCCACATCTGCAAAGTGAACTGGTTGTACCTGATGATCTGAGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CCA 90 bp TTTGGTGAGATGATTACACTTAGTTCAGAACCCATGAAAGCTACAACCAGTGAGCAGTATCATCCGATTTaGTTGCGGAGAGCTGGGATT +
Preference number: 4 (lower is better)
Translates to: FGEMITLSSEPMKATTSEQYHPI*LRRAGI
Trigger: AATCCCAGCTCTCCGCAACCAAATCGGATGATACTG...CTCACTGGTTGTAGCTTTCATGGGTTCTGAACTAAGTGTAATCATCTCACCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR CCA 90 bp TTCATTCAGCCTCAATTACCCTTGAAAGGCAGTTGCTTCCCCGTGCTATTTGAGGGGTTTGATGTTCTCTaGGTAATAGTGACAGTATTG +
Preference number: 4 (lower is better)
Translates to: FIQPQLPLKGSCFPVLFEGFDVL*VIVTVL
Trigger: CAATACTGTCACTATTACCCAGAGAACATCAAACCC...CTCAAATAGCACGGGGAAGCAACTGCCTTTCAAGGGTAATTGAGGCTGAATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR CCA 90 bp AGATTAGGCCATTATACTTTGGTCCCCTTTATTGTTGCAATTAGCAACCTTCTAGTGTGCATTCCTCGATaGTCGATGCAGAGGACCACA +
Preference number: 4 (lower is better)
Translates to: RLGHYTLVPFIVAISNLLVCIPR*SMQRTT
Trigger: TGTGGTCCTCTGCATCGACCATCGAGGAATGCACAC...TAGAAGGTTGCTAATTGCAACAATAAAGGGGACCAAAGTATAATGGCCTAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR TCA 90 bp AAAAGCTTTGGTGAGATGATTACACTTAGTTCAGAACCCATGAAAGCTACAACCGACATCATTATGAGCTaGGCATTGCTGAGCTCGGAA +
Preference number: 4 (lower is better)
Translates to: KSFGEMITLSSEPMKATTDIIMS*ALLSSE
Trigger: TTCCGAGCTCAGCAATGCTCAGCTCATAATGATGTC...GGTTGTAGCTTTCATGGGTTCTGAACTAAGTGTAATCATCTCACCAAAGCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR TCA 90 bp GTGACACTCAAGGAAAGAAAAATAACTCTAGTCTACTTTTCCTTCGCACAATACACTGGCCATGGTGCTTaGCATCATTATGAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: VTLKERKITLVYFSFAQYTGHGA*HHYELS
Trigger: GCTCAGCTCATAATGATGTCAAGCACCATGGCCAGT...GTATTGTGCGAAGGAAAAGTAGACTAGAGTTATTTTTCTTTCCTTGAGTGTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431052.6
CDS-3UTR TCA 90 bp CTTAGTTCAGAACCCATGAAAGCTACAACCAGTGAGACACTGCTTTCTTTAAACTGGGTTGATAGAAGATaGACTGGACTGTACTGTCAG +
Preference number: 4 (lower is better)
Translates to: LSSEPMKATTSETLLSLNWVDRR*TGLYCQ
Trigger: CTGACAGTACAGTCCAGTTCATCTTCTATCAACCCA...GTTTAAAGAAAGCAGTGTCTCACTGGTTGTAGCTTTCATGGGTTCTGAACTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR TCA 90 bp GAGCCAAAAAGCTTTGGTGAGATGATTACACTTAGTTCAGAACCCATGAAAGCTGCTTGGGTTTGGGTTTaGTGTTCTCTGGGTAATAGT +
Preference number: 4 (lower is better)
Translates to: EPKSFGEMITLSSEPMKAAWVWV*CSLGNS
Trigger: ACTATTACCCAGAGAACATCAAACCCAAACCCAAGC...AGCTTTCATGGGTTCTGAACTAAGTGTAATCATCTCACCAAAGCTTTTTGGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR TCA 90 bp GCTCTATCATCAAAGCAGCTTTTACAGATTCGGGATCATTCATTCAGCCTCAATGCTTGGGTTTGGGTTTaGTGTTCTCTGGGTAATAGT +
Preference number: 4 (lower is better)
Translates to: ALSSKQLLQIRDHSFSLNAWVWV*CSLGNS
Trigger: ACTATTACCCAGAGAACATCAAACCCAAACCCAAGC...ATTGAGGCTGAATGAATGATCCCGAATCTGTAAAAGCTGCTTTGATGATAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR TCA 90 bp CAGAGTGAGATATTCCACAGGAAAGGCACCTCTATACAATTATCATTTTTAGGGAGAGGTCATAAGGCATaGTCTGCTTGTATCCGTCAC +
Preference number: 4 (lower is better)
Translates to: QSEIFHRKGTSIQLSFLGRGHKA*SACIRH
Trigger: GTGACGGATACAAGCAGATCATGCCTTATGACCTCT...CCCTAAAAATGATAATTGTATAGAGGTGCCTTTCCTGTGGAATATCTCACTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR TCA 90 bp AAAAGCTTTGGTGAGATGATTACACTTAGTTCAGAACCCATGAAAGCTACAACCAGAGGTCATAAGGCATaGTCTGCTTGTATCCGTCAC +
Preference number: 4 (lower is better)
Translates to: KSFGEMITLSSEPMKATTRGHKA*SACIRH
Trigger: GTGACGGATACAAGCAGATCATGCCTTATGACCTCT...GGTTGTAGCTTTCATGGGTTCTGAACTAAGTGTAATCATCTCACCAAAGCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR TCA 90 bp TTTGACTCTTGGATGAGATTAGGCCATTATACTTTGGTCCCCTTTATTGTTGCACCTTCTTCTAGCTCTTaGGCTTGTTTGAACCATGGC +
Preference number: 4 (lower is better)
Translates to: FDSWMRLGHYTLVPFIVAPSSSS*ACLNHG
Trigger: GCCATGGTTCAAACAAGCTCAAGAGCTAGAAGAAGG...TGCAACAATAAAGGGGACCAAAGTATAATGGCCTAATCTCATCCAAGAGTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR TCA 90 bp TTTGACTCTTGGATGAGATTAGGCCATTATACTTTGGTCCCCTTTATTGTTGCAGAATCATGGGACATGTaGGCAAGTCATGGGATCTCA +
Preference number: 4 (lower is better)
Translates to: FDSWMRLGHYTLVPFIVAESWDM*ASHGIS
Trigger: TGAGATCCCATGACTTGCTCACATGTCCCATGATTC...TGCAACAATAAAGGGGACCAAAGTATAATGGCCTAATCTCATCCAAGAGTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR TCA 90 bp TGGTGGGAAATCAGAGAATTGAGTTTATCTGGAGCAAATGCGACAACATTAAGCTCTCTGACATCAGAGTaGGATATTCCACAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: WWEIRELSLSGANATTLSSLTSE*DIPQER
Trigger: CCTTTCCTGTGGAATATCTCACTCTGATGTCAGAGA...GCTTAATGTTGTCGCATTTGCTCCAGATAAACTCAATTCTCTGATTTCCCACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR TCA 90 bp TTTGTCATTTCTGAGGCGGAGGGCACAATGGCTTATTTCATCTTTCTGTTTCCTAAACTTCTGGTCTACTaGGCTCTATCATCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: FVISEAEGTMAYFIFLFPKLLVY*ALSSKQ
Trigger: CTGCTTTGATGATAGAGCTCAGTAGACCAGAAGTTT...AGGAAACAGAAAGATGAAATAAGCCATTGTGCCCTCCGCCTCAGAAATGACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR GCA 90 bp TTGTCATTTCTGAGGCGGAGGGCACAATGGCTTATTTCATCTTTCTGTTTCCTTGGCAGTCCACATTACTaGATGTTCTGTATCGGATAT +
Preference number: 4 (lower is better)
Translates to: LSFLRRRAQWLISSFCFLGSPHY*MFCIGY
Trigger: ATATCCGATACAGAACATGCAGTAATGTGGACTGCC...AAGGAAACAGAAAGATGAAATAAGCCATTGTGCCCTCCGCCTCAGAAATGACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR GCA 90 bp GAGATGATTACACTTAGTTCAGAACCCATGAAAGCTACAACCAGTGAGACACTGACTTCCATAGGGAATTaGAACCACAGTATCATCCGA +
Preference number: 4 (lower is better)
Translates to: EMITLSSEPMKATTSETLTSIGN*NHSIIR
Trigger: TCGGATGATACTGTGGTTGCAATTCCCTATGGAAGT...CAGTGTCTCACTGGTTGTAGCTTTCATGGGTTCTGAACTAAGTGTAATCATCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR GCA 90 bp CATCAGAGTGAGATATTCCACAGGAAAGGCACCTCTATACAATTATCATTTTTAGGCAGGGATCCAAATTaGAGGACTTCAGGAGCTGTG +
Preference number: 4 (lower is better)
Translates to: HQSEIFHRKGTSIQLSFLGRDPN*RTSGAV
Trigger: CACAGCTCCTGAAGTCCTGCAATTTGGATCCCTGCC...TAAAAATGATAATTGTATAGAGGTGCCTTTCCTGTGGAATATCTCACTCTGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR GCA 90 bp TTTGACTCTTGGATGAGATTAGGCCATTATACTTTGGTCCCCTTTATTGTTGCACCTAACAAAGAACGTTaGAGGCGTTCCATGCTGAGT +
Preference number: 4 (lower is better)
Translates to: FDSWMRLGHYTLVPFIVAPNKER*RRSMLS
Trigger: ACTCAGCATGGAACGCCTGCAACGTTCTTTGTTAGG...TGCAACAATAAAGGGGACCAAAGTATAATGGCCTAATCTCATCCAAGAGTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR GCA 90 bp TCAACAACTGTTCTTGTCTGTGAGTCAACAAAAGGGTCACAGGATAACCTAACCTCCTATTCGTTTTGGTaGTCAAAGAAGGGTTTAGGG +
Preference number: 4 (lower is better)
Translates to: STTVLVCESTKGSQDNLTSYSFW*SKKGLG
Trigger: CCCTAAACCCTTCTTTGAGCACCAAAACGAATAGGA...GGTTAGGTTATCCTGTGACCCTTTTGTTGACTCACAGACAAGAACAGTTGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR GCA 90 bp AGTGACACTCAAGGAAAGAAAAATAACTCTAGTCTACTTTTCCTTCGCACAATAGACGGCAGCATTCCATaGTTGGATCCTTGCCGGAAT +
Preference number: 4 (lower is better)
Translates to: SDTQGKKNNSSLLFLRTIDGSIP*LDPCRN
Trigger: ATTCCGGCAAGGATCCAAGCATGGAATGCTGCCGTC...TATTGTGCGAAGGAAAAGTAGACTAGAGTTATTTTTCTTTCCTTGAGTGTCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431052.6
CDS-3UTR CCA 90 bp TTTGGTGAGATGATTACACTTAGTTCAGAACCCATGAAAGCTACAACCAGTGAGTCGCAGCCAACAATTTaGCATAAACCACTGATGCAC +
Preference number: 4 (lower is better)
Translates to: FGEMITLSSEPMKATTSESQPTI*HKPLMH
Trigger: GTGCATCAGTGGTTTATGCCAAATTGTTGGCTGCGA...CTCACTGGTTGTAGCTTTCATGGGTTCTGAACTAAGTGTAATCATCTCACCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR CCA 90 bp TTTGACTCTTGGATGAGATTAGGCCATTATACTTTGGTCCCCTTTATTGTTGCATCACCTTTAGTCCCCTaGAGGGTTTTGGTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: FDSWMRLGHYTLVPFIVASPLVP*RVLVSR
Trigger: TCTGGAAACCAAAACCCTCCAGGGGACTAAAGGTGA...TGCAACAATAAAGGGGACCAAAGTATAATGGCCTAATCTCATCCAAGAGTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CCA 90 bp AGTTCAGAACCCATGAAAGCTACAACCAGTGAGACACTGCTTTCTTTAAACAAATCACCTTTAGTCCCCTaGAGGGTTTTGGTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: SSEPMKATTSETLLSLNKSPLVP*RVLVSR
Trigger: TCTGGAAACCAAAACCCTCCAGGGGACTAAAGGTGA...TTTGTTTAAAGAAAGCAGTGTCTCACTGGTTGTAGCTTTCATGGGTTCTGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR CCA 90 bp ATGATTACACTTAGTTCAGAACCCATGAAAGCTACAACCAGTGAGACACTGCTTGAAATCTGCTGTGAGTaGTCCAGCCATTCTCAGTAT +
Preference number: 4 (lower is better)
Translates to: MITLSSEPMKATTSETLLEICCE*SSHSQY
Trigger: ATACTGAGAATGGCTGGACCACTCACAGCAGATTTC...AAGCAGTGTCTCACTGGTTGTAGCTTTCATGGGTTCTGAACTAAGTGTAATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR CCA 90 bp ATTGAGTTTATCTGGAGCAAATGCGACAACATTAAGCTCAACAACTGTTCTTGTGCTTGTATCCGTCACTaGCTGGACAAGGATCCAAGT +
Preference number: 4 (lower is better)
Translates to: IEFIWSKCDNIKLNNCSCACIRH*LDKDPS
Trigger: ACTTGGATCCTTGTCCAGCCAGTGACGGATACAAGC...ACAAGAACAGTTGTTGAGCTTAATGTTGTCGCATTTGCTCCAGATAAACTCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CCA 90 bp GAGCCAAAAAGCTTTGGTGAGATGATTACACTTAGTTCAGAACCCATGAAAGCTGTTTATAGCAGGGAGTaGGTACGATGCATTCCTCTT +
Preference number: 4 (lower is better)
Translates to: EPKSFGEMITLSSEPMKAVYSRE*VRCIPL
Trigger: AAGAGGAATGCATCGTACCCACTCCCTGCTATAAAC...AGCTTTCATGGGTTCTGAACTAAGTGTAATCATCTCACCAAAGCTTTTTGGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR CCA 90 bp ACACTTAGTTCAGAACCCATGAAAGCTACAACCAGTGAGACACTGCTTTCTTTACTGGAAGTTTCTCTTTaGGTTTATAGCAGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: TLSSEPMKATTSETLLSLLEVSL*VYSREW
Trigger: CCACTCCCTGCTATAAACCCAAAGAGAAACTTCCAG...TAAAGAAAGCAGTGTCTCACTGGTTGTAGCTTTCATGGGTTCTGAACTAAGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR CCA 90 bp TGTTGTTACAACACAGGAATGTGGTTAGAAAGACCCTTTTGCATGTTTTTCAAAAAAGACAGGAGCACCTaGCACCTGACTATTCGCACC +
Preference number: 4 (lower is better)
Translates to: CCYNTGMWLERPFCMFFKKDRST*HLTIRT
Trigger: GGTGCGAATAGTCAGGTGCCAGGTGCTCCTGTCTTT...TTTGAAAAACATGCAAAAGGGTCTTTCTAACCACATTCCTGTGTTGTAACAACA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CCA 90 bp CTATTCGTTTTGGTGCTCAAAGAAGGGTTTAGGGACCACGAGTCCCAGCAGTTTAGAATTGAGTTTATCTaGAGCAAATGCGACAACATT +
Preference number: 4 (lower is better)
Translates to: LFVLVLKEGFRDHESQQFRIEFI*SKCDNI
Trigger: AATGTTGTCGCATTTGCTCCAGATAAACTCAATTCT...AAACTGCTGGGACTCGTGGTCCCTAAACCCTTCTTTGAGCACCAAAACGAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CCA 90 bp GATCTCAGATCATCAGGTACAACCAGTTCACTTTGCAGATGTGGAAACATAAAGTTGACAGCTGGCTGGTaGGAAATCAGAGAATTGAGT +
Preference number: 4 (lower is better)
Translates to: DLRSSGTTSSLCRCGNIKLTAGW*EIRELS
Trigger: ACTCAATTCTCTGATTTCCCACCAGCCAGCTGTCAA...CTTTATGTTTCCACATCTGCAAAGTGAACTGGTTGTACCTGATGATCTGAGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CCA 90 bp AACTCTAGTCTACTTTTCCTTCGCACAATACAACACTTGGTACTTTTCACTGAAGCAGCATTCCATGCTTaGATCCTTGCCGGAATCAGA +
Preference number: 4 (lower is better)
Translates to: NSSLLFLRTIQHLVLFTEAAFHA*ILAGIR
Trigger: TCTGATTCCGGCAAGGATCCAAGCATGGAATGCTGC...TTCAGTGAAAAGTACCAAGTGTTGTATTGTGCGAAGGAAAAGTAGACTAGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431052.6
CDS-3UTR CCA 90 bp CAGATGCCCAATGTAGATTGCACCTCTAATGGTTCCCCATGTCTGGTAGCATGTATGAAATCAAACTTCTaGTCTACTGAGCTCTATCAT +
Preference number: 4 (lower is better)
Translates to: QMPNVDCTSNGSPCLVACMKSNF*STELYH
Trigger: ATGATAGAGCTCAGTAGACCAGAAGTTTGATTTCAT...ACATGCTACCAGACATGGGGAACCATTAGAGGTGCAATCTACATTGGGCATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR TCA 90 bp ATTGAGTTTATCTGGAGCAAATGCGACAACATTAAGCTCAACAACTGTTCTTGTGACATCATTATGAGCTaGGCATTGCTGAGCTCGGAA +
Preference number: 4 (lower is better)
Translates to: IEFIWSKCDNIKLNNCSCDIIMS*ALLSSE
Trigger: TTCCGAGCTCAGCAATGCTCAGCTCATAATGATGTC...ACAAGAACAGTTGTTGAGCTTAATGTTGTCGCATTTGCTCCAGATAAACTCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR TCA 90 bp AGTGACACTCAAGGAAAGAAAAATAACTCTAGTCTACTTTTCCTTCGCACAATACTTTGGCTTGGCACTTaGGTGAACATGGGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: SDTQGKKNNSSLLFLRTILWLGT*VNMGCQ
Trigger: CTGACAACCCATGTTCACTCAAGTGCCAAGCCAAAG...TATTGTGCGAAGGAAAAGTAGACTAGAGTTATTTTTCTTTCCTTGAGTGTCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431052.6
CDS-3UTR TCA 90 bp CATCAGAGTGAGATATTCCACAGGAAAGGCACCTCTATACAATTATCATTTTTATCCTCCACAGGTTGCTaGGCAAGGAAAGAAATCCGT +
Preference number: 4 (lower is better)
Translates to: HQSEIFHRKGTSIQLSFLSSTGC*ARKEIR
Trigger: ACGGATTTCTTTCCTTGCTCAGCAACCTGTGGAGGA...TAAAAATGATAATTGTATAGAGGTGCCTTTCCTGTGGAATATCTCACTCTGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR GCA 90 bp TTTGGTGAGATGATTACACTTAGTTCAGAACCCATGAAAGCTACAACCAGTGAGGGCAGTCCACATTACTaGATGTTCTGTATCGGATAT +
Preference number: 4 (lower is better)
Translates to: FGEMITLSSEPMKATTSEGSPHY*MFCIGY
Trigger: ATATCCGATACAGAACATGCAGTAATGTGGACTGCC...CTCACTGGTTGTAGCTTTCATGGGTTCTGAACTAAGTGTAATCATCTCACCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR GCA 90 bp AGTTCAGAACCCATGAAAGCTACAACCAGTGAGACACTGCTTTCTTTAAACAAACTTGACAATGAAATCTaGTGTGAGTGGTCCAGCCAT +
Preference number: 4 (lower is better)
Translates to: SSEPMKATTSETLLSLNKLDNEI*CEWSSH
Trigger: ATGGCTGGACCACTCACAGCAGATTTCATTGTCAAG...TTTGTTTAAAGAAAGCAGTGTCTCACTGGTTGTAGCTTTCATGGGTTCTGAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR GCA 90 bp ATTGAGTTTATCTGGAGCAAATGCGACAACATTAAGCTCAACAACTGTTCTTGTAGGGAGTGGGTACGATaGATTCCTCTTTTATGTGGG +
Preference number: 4 (lower is better)
Translates to: IEFIWSKCDNIKLNNCSCREWVR*IPLLCG
Trigger: CCCACATAAAAGAGGAATGCATCGTACCCACTCCCT...ACAAGAACAGTTGTTGAGCTTAATGTTGTCGCATTTGCTCCAGATAAACTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR GCA 90 bp AGTGACACTCAAGGAAAGAAAAATAACTCTAGTCTACTTTTCCTTCGCACAATACCATGCTTGGATCCTTaGCGGAATCAGAATCGGACA +
Preference number: 4 (lower is better)
Translates to: SDTQGKKNNSSLLFLRTIPCLDP*RNQNRT
Trigger: TGTCCGATTCTGATTCCGGCAAGGATCCAAGCATGG...TATTGTGCGAAGGAAAAGTAGACTAGAGTTATTTTTCTTTCCTTGAGTGTCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431052.6
CDS-3UTR GCA 90 bp TTGTCATTTCTGAGGCGGAGGGCACAATGGCTTATTTCATCTTTCTGTTTCCTTATTTACTTTTGGTCATaGTGGATTTGGGGCATTCCT +
Preference number: 4 (lower is better)
Translates to: LSFLRRRAQWLISSFCFLIYFWS*WIWGIP
Trigger: AGGAATGCCCCAAATCCAGCATGACCAAAAGTAAAT...AAGGAAACAGAAAGATGAAATAAGCCATTGTGCCCTCCGCCTCAGAAATGACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR CCA 90 bp AGTCTACTTTTCCTTCGCACAATACAACACTTGGTACTTTTCACTGAAATCATAATCACCTGCTTCTGGTaGGCAGTCCACATTACTGCA +
Preference number: 4 (lower is better)
Translates to: SLLFLRTIQHLVLFTEIIITCFW*AVHITA
Trigger: TGCAGTAATGTGGACTGCCCACCAGAAGCAGGTGAT...TATGATTTCAGTGAAAAGTACCAAGTGTTGTATTGTGCGAAGGAAAAGTAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431052.6
CDS-3UTR CCA 90 bp ACTCTAGTCTACTTTTCCTTCGCACAATACAACACTTGGTACTTTTCACTGAAAGTTGTTCCTTTGGCTTaGCACTTGAGTGAACATGGG +
Preference number: 4 (lower is better)
Translates to: TLVYFSFAQYNTWYFSLKVVPLA*HLSEHG
Trigger: CCCATGTTCACTCAAGTGCCAAGCCAAAGGAACAAC...TTTCAGTGAAAAGTACCAAGTGTTGTATTGTGCGAAGGAAAAGTAGACTAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431052.6
CDS-3UTR CCA 90 bp CAGAGTGAGATATTCCACAGGAAAGGCACCTCTATACAATTATCATTTTTAGGGTCGCAGCCAACAATTTaGCATAAACCACTGATGCAC +
Preference number: 4 (lower is better)
Translates to: QSEIFHRKGTSIQLSFLGSQPTI*HKPLMH
Trigger: GTGCATCAGTGGTTTATGCCAAATTGTTGGCTGCGA...CCCTAAAAATGATAATTGTATAGAGGTGCCTTTCCTGTGGAATATCTCACTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CCA 90 bp TGGTGGGAAATCAGAGAATTGAGTTTATCTGGAGCAAATGCGACAACATTAAGCTCCCCTGGAGGGTTTTaGTTTCCAGATATAAGTGAT +
Preference number: 4 (lower is better)
Translates to: WWEIRELSLSGANATTLSSPGGF*FPDISD
Trigger: ATCACTTATATCTGGAAACCAAAACCCTCCAGGGGA...GCTTAATGTTGTCGCATTTGCTCCAGATAAACTCAATTCTCTGATTTCCCACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CCA 90 bp GCATTTGGGTGTTGTTACAACACAGGAATGTGGTTAGAAAGACCCTTTTGCATGGGGTTTGATGTTCTCTaGGTAATAGTGACAGTATTG +
Preference number: 4 (lower is better)
Translates to: AFGCCYNTGMWLERPFCMGFDVL*VIVTVL
Trigger: CAATACTGTCACTATTACCCAGAGAACATCAAACCC...CATGCAAAAGGGTCTTTCTAACCACATTCCTGTGTTGTAACAACACCCAAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR TCA 90 bp AGTGACACTCAAGGAAAGAAAAATAACTCTAGTCTACTTTTCCTTCGCACAATAGACATCATTATGAGCTaGGCATTGCTGAGCTCGGAA +
Preference number: 4 (lower is better)
Translates to: SDTQGKKNNSSLLFLRTIDIIMS*ALLSSE
Trigger: TTCCGAGCTCAGCAATGCTCAGCTCATAATGATGTC...TATTGTGCGAAGGAAAAGTAGACTAGAGTTATTTTTCTTTCCTTGAGTGTCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431052.6
CDS-3UTR TCA 90 bp TTTGTCATTTCTGAGGCGGAGGGCACAATGGCTTATTTCATCTTTCTGTTTCCTTTTGGCATAAACCACTaGTGCACATATCCAAAGATT +
Preference number: 4 (lower is better)
Translates to: FVISEAEGTMAYFIFLFPFGINH*CTYPKI
Trigger: AATCTTTGGATATGTGCATCAGTGGTTTATGCCAAA...AGGAAACAGAAAGATGAAATAAGCCATTGTGCCCTCCGCCTCAGAAATGACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR TCA 90 bp TCCTGTGTTTGTGATAGTGCGCTTCTAGGAAAGACACAGGAATTTGTCCAATGTGTTTCCAGATATAAGTaGTCAGGACCTTTTAAGACA +
Preference number: 4 (lower is better)
Translates to: SCVCDSALLGKTQEFVQCVSRYK*SGPFKT
Trigger: TGTCTTAAAAGGTCCTGATCACTTATATCTGGAAAC...ACATTGGACAAATTCCTGTGTCTTTCCTAGAAGCGCACTATCACAAACACAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR TCA 90 bp AGATTAGGCCATTATACTTTGGTCCCCTTTATTGTTGCAATTAGCAACCTTCTATGGGTTGATAGAAGATaGACTGGACTGTACTGTCAG +
Preference number: 4 (lower is better)
Translates to: RLGHYTLVPFIVAISNLLWVDRR*TGLYCQ
Trigger: CTGACAGTACAGTCCAGTTCATCTTCTATCAACCCA...TAGAAGGTTGCTAATTGCAACAATAAAGGGGACCAAAGTATAATGGCCTAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR TCA 90 bp GATCTCAGATCATCAGGTACAACCAGTTCACTTTGCAGATGTGGAAACATAAAGGGAGAGATTTTTCTCTaGCATCAGAGTGAGATATTC +
Preference number: 4 (lower is better)
Translates to: DLRSSGTTSSLCRCGNIKGEIFL*HQSEIF
Trigger: GAATATCTCACTCTGATGTCAGAGAAAAATCTCTCC...CTTTATGTTTCCACATCTGCAAAGTGAACTGGTTGTACCTGATGATCTGAGATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR TCA 90 bp ATGATTACACTTAGTTCAGAACCCATGAAAGCTACAACCAGTGAGACACTGCTTGAAAGCTACAACCAGTaGGACACTGCTTTCTTTAAA +
Preference number: 4 (lower is better)
Translates to: MITLSSEPMKATTSETLLESYNQ*DTAFFK
Trigger: TTTAAAGAAAGCAGTGTCTCACTGGTTGTAGCTTTC...AAGCAGTGTCTCACTGGTTGTAGCTTTCATGGGTTCTGAACTAAGTGTAATCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR TCA 90 bp TCAGAACCCATGAAAGCTACAACCAGTGAGACACTGCTTTCTTTAAACAAAACATTAGTTCAGAACCCATaGAAGCTACAACCAGTGAGA +
Preference number: 4 (lower is better)
Translates to: SEPMKATTSETLLSLNKTLVQNP*KLQPVR
Trigger: TCTCACTGGTTGTAGCTTTCATGGGTTCTGAACTAA...TGTTTTGTTTAAAGAAAGCAGTGTCTCACTGGTTGTAGCTTTCATGGGTTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR GCA 90 bp AAAAGCTTTGGTGAGATGATTACACTTAGTTCAGAACCCATGAAAGCTACAACCATCATCCGATTTGGTTaGGGAGAGCTGGGATTTATA +
Preference number: 4 (lower is better)
Translates to: KSFGEMITLSSEPMKATTIIRFG*GELGFI
Trigger: TATAAATCCCAGCTCTCCGCAACCAAATCGGATGAT...GGTTGTAGCTTTCATGGGTTCTGAACTAAGTGTAATCATCTCACCAAAGCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR GCA 90 bp TTTGACTCTTGGATGAGATTAGGCCATTATACTTTGGTCCCCTTTATTGTTGCAACTTCCATAGGGAATTaGAACCACAGTATCATCCGA +
Preference number: 4 (lower is better)
Translates to: FDSWMRLGHYTLVPFIVATSIGN*NHSIIR
Trigger: TCGGATGATACTGTGGTTGCAATTCCCTATGGAAGT...TGCAACAATAAAGGGGACCAAAGTATAATGGCCTAATCTCATCCAAGAGTCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR GCA 90 bp GCATTTGGGTGTTGTTACAACACAGGAATGTGGTTAGAAAGACCCTTTTGCATGTTTATCTGGAGCAAATaGGACAACATTAAGCTCAAC +
Preference number: 4 (lower is better)
Translates to: AFGCCYNTGMWLERPFCMFIWSK*DNIKLN
Trigger: GTTGAGCTTAATGTTGTCGCATTTGCTCCAGATAAA...CATGCAAAAGGGTCTTTCTAACCACATTCCTGTGTTGTAACAACACCCAAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR GCA 90 bp ACAAACATTAAATGTACATTCATTTCATGCAACGAGCATTCTGCTTCCCACCCATTCTGCAATGTTGTGTaGCTTAGAGCCTGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: TNIKCTFISCNEHSASHPFCNVV*LRACFV
Trigger: AACAAAGCAGGCTCTAAGGCACACAACATTGCAGAA...TGGGTGGGAAGCAGAATGCTCGTTGCATGAAATGAATGTACATTTAATGTTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CCA 90 bp AGTCTACTTTTCCTTCGCACAATACAACACTTGGTACTTTTCACTGAAATCATAGAAATCACCTGCTTCTaGTGGGCAGTCCACATTACT +
Preference number: 4 (lower is better)
Translates to: SLLFLRTIQHLVLFTEIIEITCF*WAVHIT
Trigger: AGTAATGTGGACTGCCCACCAGAAGCAGGTGATTTC...TATGATTTCAGTGAAAAGTACCAAGTGTTGTATTGTGCGAAGGAAAAGTAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431052.6
CDS-3UTR CCA 90 bp AAAAGCTTTGGTGAGATGATTACACTTAGTTCAGAACCCATGAAAGCTACAACCTCCCCTGGAGGGTTTTaGTTTCCAGATATAAGTGAT +
Preference number: 4 (lower is better)
Translates to: KSFGEMITLSSEPMKATTSPGGF*FPDISD
Trigger: ATCACTTATATCTGGAAACCAAAACCCTCCAGGGGA...GGTTGTAGCTTTCATGGGTTCTGAACTAAGTGTAATCATCTCACCAAAGCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR CCA 90 bp ACACTTAGTTCAGAACCCATGAAAGCTACAACCAGTGAGACACTGCTTTCTTTAGGGTTTGATGTTCTCTaGGTAATAGTGACAGTATTG +
Preference number: 4 (lower is better)
Translates to: TLSSEPMKATTSETLLSLGFDVL*VIVTVL
Trigger: CAATACTGTCACTATTACCCAGAGAACATCAAACCC...TAAAGAAAGCAGTGTCTCACTGGTTGTAGCTTTCATGGGTTCTGAACTAAGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR CCA 90 bp TGTTGTTACAACACAGGAATGTGGTTAGAAAGACCCTTTTGCATGTTTTTCAAAAGAAGCCAGGCCTCTTaGTTGCCTAACAAAGAACGT +
Preference number: 4 (lower is better)
Translates to: CCYNTGMWLERPFCMFFKRSQAS*LPNKER
Trigger: ACGTTCTTTGTTAGGCAACCAAGAGGCCTGGCTTCT...TTTGAAAAACATGCAAAAGGGTCTTTCTAACCACATTCCTGTGTTGTAACAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CCA 90 bp GATCTCAGATCATCAGGTACAACCAGTTCACTTTGCAGATGTGGAAACATAAAGTTCACTTTGCAGATGTaGAAACATAAAGGGCAGACA +
Preference number: 4 (lower is better)
Translates to: DLRSSGTTSSLCRCGNIKFTLQM*KHKGQT
Trigger: TGTCTGCCCTTTATGTTTCCACATCTGCAAAGTGAA...CTTTATGTTTCCACATCTGCAAAGTGAACTGGTTGTACCTGATGATCTGAGATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CCA 90 bp GATCTCAGATCATCAGGTACAACCAGTTCACTTTGCAGATGTGGAAACATAAAGTACAACACAGGAATGTaGTTAGAAAGACCCTTTTGC +
Preference number: 4 (lower is better)
Translates to: DLRSSGTTSSLCRCGNIKYNTGM*LERPFC
Trigger: GCAAAAGGGTCTTTCTAACCACATTCCTGTGTTGTA...CTTTATGTTTCCACATCTGCAAAGTGAACTGGTTGTACCTGATGATCTGAGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR TCA 90 bp AGCTTTGGTGAGATGATTACACTTAGTTCAGAACCCATGAAAGCTACAACCAGTTTTGGCATAAACCACTaGTGCACATATCCAAAGATT +
Preference number: 4 (lower is better)
Translates to: SFGEMITLSSEPMKATTSFGINH*CTYPKI
Trigger: AATCTTTGGATATGTGCATCAGTGGTTTATGCCAAA...ACTGGTTGTAGCTTTCATGGGTTCTGAACTAAGTGTAATCATCTCACCAAAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR TCA 90 bp CATCAGAGTGAGATATTCCACAGGAAAGGCACCTCTATACAATTATCATTTTTAGCTTGGGTTTGGGTTTaGTGTTCTCTGGGTAATAGT +
Preference number: 4 (lower is better)
Translates to: HQSEIFHRKGTSIQLSFLAWVWV*CSLGNS
Trigger: ACTATTACCCAGAGAACATCAAACCCAAACCCAAGC...TAAAAATGATAATTGTATAGAGGTGCCTTTCCTGTGGAATATCTCACTCTGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR TCA 90 bp AGATTAGGCCATTATACTTTGGTCCCCTTTATTGTTGCAATTAGCAACCTTCTAAACTGTTCTTGTCTGTaGGTCAACAAAAGGGTCACA +
Preference number: 4 (lower is better)
Translates to: RLGHYTLVPFIVAISNLLNCSCL*VNKRVT
Trigger: TGTGACCCTTTTGTTGACTCACAGACAAGAACAGTT...TAGAAGGTTGCTAATTGCAACAATAAAGGGGACCAAAGTATAATGGCCTAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR TCA 90 bp GAGCCAAAAAGCTTTGGTGAGATGATTACACTTAGTTCAGAACCCATGAAAGCTAAAGCTTTGGTGAGATaGTTACACTTAGTTCAGAAC +
Preference number: 4 (lower is better)
Translates to: EPKSFGEMITLSSEPMKAKALVR*LHLVQN
Trigger: GTTCTGAACTAAGTGTAATCATCTCACCAAAGCTTT...AGCTTTCATGGGTTCTGAACTAAGTGTAATCATCTCACCAAAGCTTTTTGGCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR TCA 90 bp TACTTTTCCTTCGCACAATACAACACTTGGTACTTTTCACTGAAATCATACCTTACCCTCTGGACAAGTTaGATGAGAACAAATCAGCAC +
Preference number: 4 (lower is better)
Translates to: YFSFAQYNTWYFSLKSYLTLWTS*MRTNQH
Trigger: GTGCTGATTTGTTCTCATTCAACTTGTCCAGAGGGT...AAGGTATGATTTCAGTGAAAAGTACCAAGTGTTGTATTGTGCGAAGGAAAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431052.6
CDS-3UTR GCA 90 bp AGATTAGGCCATTATACTTTGGTCCCCTTTATTGTTGCAATTAGCAACCTTCTAATCATCCGATTTGGTTaGGGAGAGCTGGGATTTATA +
Preference number: 4 (lower is better)
Translates to: RLGHYTLVPFIVAISNLLIIRFG*GELGFI
Trigger: TATAAATCCCAGCTCTCCGCAACCAAATCGGATGAT...TAGAAGGTTGCTAATTGCAACAATAAAGGGGACCAAAGTATAATGGCCTAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CCA 90 bp CATCAGAGTGAGATATTCCACAGGAAAGGCACCTCTATACAATTATCATTTTTACTGGAAGTTTCTCTTTaGGTTTATAGCAGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: HQSEIFHRKGTSIQLSFLLEVSL*VYSREW
Trigger: CCACTCCCTGCTATAAACCCAAAGAGAAACTTCCAG...TAAAAATGATAATTGTATAGAGGTGCCTTTCCTGTGGAATATCTCACTCTGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR TCA 90 bp TCAGAACCCATGAAAGCTACAACCAGTGAGACACTGCTTTCTTTAAACAAAACAGTTTCCAGATATAAGTaGTCAGGACCTTTTAAGACA +
Preference number: 4 (lower is better)
Translates to: SEPMKATTSETLLSLNKTVSRYK*SGPFKT
Trigger: TGTCTTAAAAGGTCCTGATCACTTATATCTGGAAAC...TGTTTTGTTTAAAGAAAGCAGTGTCTCACTGGTTGTAGCTTTCATGGGTTCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR TCA 90 bp ACTCTAGTCTACTTTTCCTTCGCACAATACAACACTTGGTACTTTTCACTGAAACTTGGCATAAACCACTaGTGCACATATCCAAAGATT +
Preference number: 4 (lower is better)
Translates to: TLVYFSFAQYNTWYFSLKLGINH*CTYPKI
Trigger: AATCTTTGGATATGTGCATCAGTGGTTTATGCCAAG...TTTCAGTGAAAAGTACCAAGTGTTGTATTGTGCGAAGGAAAAGTAGACTAGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431052.6
CDS-3UTR GCA 90 bp AGTGACACTCAAGGAAAGAAAAATAACTCTAGTCTACTTTTCCTTCGCACAATAGGCAGTCCACATTACTaGATGTTCTGTATCGGATAT +
Preference number: 4 (lower is better)
Translates to: SDTQGKKNNSSLLFLRTIGSPHY*MFCIGY
Trigger: ATATCCGATACAGAACATGCAGTAATGTGGACTGCC...TATTGTGCGAAGGAAAAGTAGACTAGAGTTATTTTTCTTTCCTTGAGTGTCACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431052.6
CDS-3UTR CCA 90 bp CAGAGTGAGATATTCCACAGGAAAGGCACCTCTATACAATTATCATTTTTAGGGATGTCCTATTCGTTTTaGTGCTCAAAGAAGGGTTTA +
Preference number: 4 (lower is better)
Translates to: QSEIFHRKGTSIQLSFLGMSYSF*CSKKGL
Trigger: TAAACCCTTCTTTGAGCACCAAAACGAATAGGACAT...CCCTAAAAATGATAATTGTATAGAGGTGCCTTTCCTGTGGAATATCTCACTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276935.6
3UTR CAA 72 bp TGTTTTGACTCTTGGATGAGATTAGGCCATTATACTTaGGTCCCCTTTATTGTTGCAATTAGCAACCTTCTA +
Preference number: 4 (lower is better)
Translates to: CFDSWMRLGHYT*VPFIVAISNLL
Trigger: TAGAAGGTTGCTAATTGCAACAATAAAGGGGACCAAAGTATAATGGCCTAATCTCATCCAAGAGTCAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR TCA 90 bp ATTGAGTTTATCTGGAGCAAATGCGACAACATTAAGCTCAACAACTGTTCTTGTTTTGGCATAAACCACTaGTGCACATATCCAAAGATT +
Preference number: 4 (lower is better)
Translates to: IEFIWSKCDNIKLNNCSCFGINH*CTYPKI
Trigger: AATCTTTGGATATGTGCATCAGTGGTTTATGCCAAA...ACAAGAACAGTTGTTGAGCTTAATGTTGTCGCATTTGCTCCAGATAAACTCAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR TCA 90 bp ATTGAGTTTATCTGGAGCAAATGCGACAACATTAAGCTCAACAACTGTTCTTGTGTTTCCAGATATAAGTaGTCAGGACCTTTTAAGACA +
Preference number: 4 (lower is better)
Translates to: IEFIWSKCDNIKLNNCSCVSRYK*SGPFKT
Trigger: TGTCTTAAAAGGTCCTGATCACTTATATCTGGAAAC...ACAAGAACAGTTGTTGAGCTTAATGTTGTCGCATTTGCTCCAGATAAACTCAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR TCA 90 bp AGTGACACTCAAGGAAAGAAAAATAACTCTAGTCTACTTTTCCTTCGCACAATATTTACACAAAGACATTaGAACCCTCTGGACAAGTTG +
Preference number: 4 (lower is better)
Translates to: SDTQGKKNNSSLLFLRTIFTQRH*NPLDKL
Trigger: CAACTTGTCCAGAGGGTTTCAATGTCTTTGTGTAAA...TATTGTGCGAAGGAAAAGTAGACTAGAGTTATTTTTCTTTCCTTGAGTGTCACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431052.6
CDS-3UTR GCA 90 bp AGATTAGGCCATTATACTTTGGTCCCCTTTATTGTTGCAATTAGCAACCTTCTAACAACCAGTTCACTTTaGAGATGTGGAAACATAAAG +
Preference number: 4 (lower is better)
Translates to: RLGHYTLVPFIVAISNLLTTSSL*RCGNIK
Trigger: CTTTATGTTTCCACATCTGCAAAGTGAACTGGTTGT...TAGAAGGTTGCTAATTGCAACAATAAAGGGGACCAAAGTATAATGGCCTAATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CCA 90 bp TACTTTTCCTTCGCACAATACAACACTTGGTACTTTTCACTGAAATCATACCTTAAATCAGCACTTACTTaGCATAAACCACTGATGCAC +
Preference number: 4 (lower is better)
Translates to: YFSFAQYNTWYFSLKSYLKSALT*HKPLMH
Trigger: GTGCATCAGTGGTTTATGCCAAGTAAGTGCTGATTT...AAGGTATGATTTCAGTGAAAAGTACCAAGTGTTGTATTGTGCGAAGGAAAAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431052.6
CDS-3UTR CCA 90 bp ACTCTAGTCTACTTTTCCTTCGCACAATACAACACTTGGTACTTTTCACTGAAAGCACAATACAACACTTaGTACTTTTCACTGAAATCA +
Preference number: 4 (lower is better)
Translates to: TLVYFSFAQYNTWYFSLKAQYNT*YFSLKS
Trigger: TGATTTCAGTGAAAAGTACCAAGTGTTGTATTGTGC...TTTCAGTGAAAAGTACCAAGTGTTGTATTGTGCGAAGGAAAAGTAGACTAGAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000431052.6
CDS GCA 90 bp GGCGGCCGGCAGGCGGGCTCGGGCGTGCGCCCCACGAGACAGAGCTaGGCTGGGGCAGGCGGCGCGGCTTTGGAGCTTCAGTGCGGCCGC +
Preference number: 5 (lower is better)
Translates to: GGRQAGSGVRPTRQS*AGAGGAALELQCGR
Trigger: GCGGCCGCACTGAAGCTCCAAAGCCGCGCCGCCTGCCCCAGCGCAGCTCTGTCTCGTGGGGCGCACGCCCGAGCCCGCCTGCCGGCCGCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680146.1
CDS TCA 90 bp TCTCAGGCGAGACCCCTCCCTCGAAGAGGTGGCCGCCTCCTGCGCTaGTTGCGGTGGCTCCGCGGCGGCGGCCGGCAGGCGGGCTCGGGC +
Preference number: 5 (lower is better)
Translates to: SQARPLPRRGGRLLR*LRWLRGGGRQAGSG
Trigger: GCCCGAGCCCGCCTGCCGGCCGCCGCCGCGGAGCCACCGCAATCAGCGCAGGAGGCGGCCACCTCTTCGAGGGAGGGGTCTCGCCTGAGA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680146.1
CDS GCA 90 bp GGGAGTCTCAGGCGAGACCCCTCCCTCGAAGAGGTGGCCGCCTCCTaGGCTGATTGCGGTGGCTCCGCGGCGGCGGCCGGCAGGCGGGCT +
Preference number: 5 (lower is better)
Translates to: GSLRRDPSLEEVAAS*ADCGGSAAAAGRRA
Trigger: AGCCCGCCTGCCGGCCGCCGCCGCGGAGCCACCGCAATCAGCGCAGGAGGCGGCCACCTCTTCGAGGGAGGGGTCTCGCCTGAGACTCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680146.1
CDS GCA 90 bp GCACCCGGGTCCTCCTCCGAGGTCGTGTTCCTTTCCGCAGAGTCCTaGGCCTCCCACGAGGCCAGCAGCTCTCCGGGCCAGCCGCCCTGC +
Preference number: 5 (lower is better)
Translates to: APGSSSEVVFLSAES*ASHEASSSPGQPPC
Trigger: GCAGGGCGGCTGGCCCGGAGAGCTGCTGGCCTCGTGGGAGGCGCAGGACTCTGCGGAAAGGAACACGACCTCGGAGGAGGACCCGGGTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS GCA 90 bp CTGAGAGCTGCTGGGCCGCTGAGATCTTGCGCAGGATGGTGGGCTTaGGGTGTGGCCTTCGAGAGCCTCCCCCGGCGTCCCCGGTGGAGG +
Preference number: 5 (lower is better)
Translates to: LRAAGPLRSCAGWWA*GVAFESLPRRPRWR
Trigger: CCTCCACCGGGGACGCCGGGGGAGGCTCTCGAAGGCCACACCGCAAGCCCACCATCCTGCGCAAGATCTCAGCGGCCCAGCAGCTCTCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS TCA 90 bp CACTCAGTGTCCCGCTGGCCAGGGCCACCGTCTGCCCCAGGTGGGTaGCCACCTCCGAGGCTGAGAGCTGCTGGGCCGCTGAGATCTTGC +
Preference number: 5 (lower is better)
Translates to: HSVSRWPGPPSAPGG*PPPRLRAAGPLRSC
Trigger: GCAAGATCTCAGCGGCCCAGCAGCTCTCAGCCTCGGAGGTGGTCACCCACCTGGGGCAGACGGTGGCCCTGGCCAGCGGGACACTGAGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS GCA 90 bp CAGGCGGCGCGGCTTTGGAGCTTCAGTGCGGCCGCGGAGCGGGTCTaGTTTGAATGGGAGCGCGTGCGCTGGGGGTGGGGGCGTTATTTG +
Preference number: 5 (lower is better)
Translates to: QAARLWSFSAAAERV*FEWERVRWGWGRYL
Trigger: CAAATAACGCCCCCACCCCCAGCGCACGCGCTCCCATTCAAAGCAGACCCGCTCCGCGGCCGCACTGAAGCTCCAAAGCCGCGCCGCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000680146.1
CDS GCA 90 bp ACTGGGGAAGTCCTGCGCTCCGAGGGCTTCAGGAGCGTGTCCTGGTaGTCCAGGTGGCTGCGGAAGATCTCCTGGGCCAGCTGGGCCACC +
Preference number: 5 (lower is better)
Translates to: TGEVLRSEGFRSVSW*SRWLRKISWASWAT
Trigger: GGTGGCCCAGCTGGCCCAGGAGATCTTCCGCAGCCACCTGGAGCACCAGGACACGCTCCTGAAGCCCTCGGAGCGCAGGACTTCCCCAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS GCA 90 bp GCCACCGTCTGCCCCAGGTGGGTGACCACCTCCGAGGCTGAGAGCTaGTGGGCCGCTGAGATCTTGCGCAGGATGGTGGGCTTGCGGTGT +
Preference number: 5 (lower is better)
Translates to: ATVCPRWVTTSEAES*WAAEILRRMVGLRC
Trigger: ACACCGCAAGCCCACCATCCTGCGCAAGATCTCAGCGGCCCAGCAGCTCTCAGCCTCGGAGGTGGTCACCCACCTGGGGCAGACGGTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CCA 90 bp ACCGTCTGCCCCAGGTGGGTGACCACCTCCGAGGCTGAGAGCTGCTaGGCCGCTGAGATCTTGCGCAGGATGGTGGGCTTGCGGTGTGGC +
Preference number: 5 (lower is better)
Translates to: TVCPRWVTTSEAESC*AAEILRRMVGLRCG
Trigger: GCCACACCGCAAGCCCACCATCCTGCGCAAGATCTCAGCGGCCCAGCAGCTCTCAGCCTCGGAGGTGGTCACCCACCTGGGGCAGACGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS TCA 90 bp GGTTCCCCAGGATGTCGTCCAGGCGCCGCTGCTCGGTCACCATGGTaGAGGGCAGGTGCAGGAGCACTTGCTCTGCACCCGGGTCCTCCT +
Preference number: 5 (lower is better)
Translates to: GSPGCRPGAAARSPW*RAGAGALALHPGPP
Trigger: AGGAGGACCCGGGTGCAGAGCAAGTGCTCCTGCACCTGCCCTTCACCATGGTGACCGAGCAGCGGCGCCTGGACGACATCCTGGGGAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS TCA 90 bp TGGGCTGCACCGCAGGGCGAACCTTCCCTGCGCAGTGGGCAGGGTTaGCCTCCGTGCTGTTCAGCAGGCACCTCAAGCGGGGCTGCTGAA +
Preference number: 5 (lower is better)
Translates to: WAAPQGEPSLRSGQG*PPCCSAGTSSGAAE
Trigger: TTCAGCAGCCCCGCTTGAGGTGCCTGCTGAACAGCACGGAGGTCAACCCTGCCCACTGCGCAGGGAAGGTTCGCCCTGCGGTGCAGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380538.4
ENST00000380545.9
ENST00000380548.9
ENST00000380559.7
ENST00000542621.5
ENST00000680146.1
CDS GCA 90 bp ATGTCGTCCAGGCGCCGCTGCTCGGTCACCATGGTGAAGGGCAGGTaGAGGAGCACTTGCTCTGCACCCGGGTCCTCCTCCGAGGTCGTG +
Preference number: 5 (lower is better)
Translates to: MSSRRRCSVTMVKGR*RSTCSAPGSSSEVV
Trigger: CACGACCTCGGAGGAGGACCCGGGTGCAGAGCAAGTGCTCCTGCACCTGCCCTTCACCATGGTGACCGAGCAGCGGCGCCTGGACGACAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS GCA 90 bp TCTCCGGTTGCACGCGATGGGCTGCACCGCAGGGCGAACCTTCCCTaGGCAGTGGGCAGGGTTGACCTCCGTGCTGTTCAGCAGGCACCT +
Preference number: 5 (lower is better)
Translates to: SPVARDGLHRRANLP*AVGRVDLRAVQQAP
Trigger: AGGTGCCTGCTGAACAGCACGGAGGTCAACCCTGCCCACTGCGCAGGGAAGGTTCGCCCTGCGGTGCAGCCCATCGCGTGCAACCGGAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380538.4
ENST00000380545.9
ENST00000380548.9
ENST00000380559.7
ENST00000542621.5
ENST00000680146.1
CDS GCA 90 bp ACCATCCACCGAGAAGGGCAGTCTCTCCGGTTGCACGCGATGGGCTaGACCGCAGGGCGAACCTTCCCTGCGCAGTGGGCAGGGTTGACC +
Preference number: 5 (lower is better)
Translates to: TIHREGQSLRLHAMG*TAGRTFPAQWAGLT
Trigger: GGTCAACCCTGCCCACTGCGCAGGGAAGGTTCGCCCTGCGGTGCAGCCCATCGCGTGCAACCGGAGAGACTGCCCTTCTCGGTGGATGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS GCA 90 bp CCCATTGCACGAGAAGGGCAGTCTCTCCGGTTGCACGCGATGGGCTaGACCGCAGGGCGAACCTTCCCTGCGCAGTGGGCAGGGTTGACC +
Preference number: 5 (lower is better)
Translates to: PIAREGQSLRLHAMG*TAGRTFPAQWAGLT
Trigger: GGTCAACCCTGCCCACTGCGCAGGGAAGGTTCGCCCTGCGGTGCAGCCCATCGCGTGCAACCGGAGAGACTGCCCTTCTCGTGCAATGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542621.5
CDS GCA 90 bp GGCCCGATGCAAGGCCCATTGCACGAGAAGGGCAGTCTCTCCGGTTaGACGCGATGGGCTGCACCGCAGGGCGAACCTTCCCTGCGCAGT +
Preference number: 5 (lower is better)
Translates to: GPMQGPLHEKGSLSG*TRWAAPQGEPSLRS
Trigger: ACTGCGCAGGGAAGGTTCGCCCTGCGGTGCAGCCCATCGCGTGCAACCGGAGAGACTGCCCTTCTCGTGCAATGGGCCTTGCATCGGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542621.5
CDS CCA 90 bp TCCCCGGGTTGGCGGCCAGGCCCCGCTTCTCCGCCTTGCTGCCGTTaGAGAAGATCCCGTTCTGGTGTTTGTGGGTCTGCAGGGCCTCCT +
Preference number: 5 (lower is better)
Translates to: SPGWRPGPASPPCCR*RRSRSGVCGSAGPP
Trigger: AGGAGGCCCTGCAGACCCACAAACACCAGAACGGGATCTTCTCCAACGGCAGCAAGGCGGAGAAGCGGGGCCTGGCCGCCAACCCGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CCA 90 bp TTGCACGCGATGGGCTGCACCGCAGGGCGAACCTTCCCTGCGCAGTaGGCAGGGTTGACCTCCGTGCTGTTCAGCAGGCACCTCAAGCGG +
Preference number: 5 (lower is better)
Translates to: LHAMGCTAGRTFPAQ*AGLTSVLFSRHLKR
Trigger: CCGCTTGAGGTGCCTGCTGAACAGCACGGAGGTCAACCCTGCCCACTGCGCAGGGAAGGTTCGCCCTGCGGTGCAGCCCATCGCGTGCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380538.4
ENST00000380545.9
ENST00000380548.9
ENST00000380559.7
ENST00000542621.5
ENST00000680146.1
CDS TCA 90 bp GGCGCGGCTTTGGAGCTTCAGTGCGGCCGCGGAGCGGGTCTGCTTTaGATGGGAGCGCGTGCGCTGGGGGTGGGGGCGTTATTTGTGAAT +
Preference number: 5 (lower is better)
Translates to: GAALELQCGRGAGLL*MGARALGVGALFVN
Trigger: ATTCACAAATAACGCCCCCACCCCCAGCGCACGCGCTCCCATTCAAAGCAGACCCGCTCCGCGGCCGCACTGAAGCTCCAAAGCCGCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000680146.1
CDS GCA 90 bp CGCCGCTGCTCGGTCACCATGGTGAAGGGCAGGTGCAGGAGCACTTaGTCTGCACCCGGGTCCTCCTCCGAGGTCGTGTTCCTTTCCGCA +
Preference number: 5 (lower is better)
Translates to: RRCSVTMVKGRCRST*SAPGSSSEVVFLSA
Trigger: TGCGGAAAGGAACACGACCTCGGAGGAGGACCCGGGTGCAGAGCAAGTGCTCCTGCACCTGCCCTTCACCATGGTGACCGAGCAGCGGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS GCA 90 bp TCGGGCTGCTGGGAGAGGTTCCCCAGGATGTCGTCCAGGCGCCGCTaGTCGGTCACCATGGTGAAGGGCAGGTGCAGGAGCACTTGCTCT +
Preference number: 5 (lower is better)
Translates to: SGCWERFPRMSSRRR*SVTMVKGRCRSTCS
Trigger: AGAGCAAGTGCTCCTGCACCTGCCCTTCACCATGGTGACCGAGCAGCGGCGCCTGGACGACATCCTGGGGAACCTCTCCCAGCAGCCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS GCA 90 bp CTGGCCCAGCTGATGGTAGGCCTTGGGTGGCCGATGGCCTCACAGTaGAGAAGAACACTCAGTGTCCCGCTGGCCAGGGCCACCGTCTGC +
Preference number: 5 (lower is better)
Translates to: LAQLMVGLGWPMASQ*RRTLSVPLARATVC
Trigger: GCAGACGGTGGCCCTGGCCAGCGGGACACTGAGTGTTCTTCTGCACTGTGAGGCCATCGGCCACCCAAGGCCTACCATCAGCTGGGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS GCA 90 bp CAGACCAGGAGGTCACCATCCACCGAGAAGGGCAGTCTCTCCGGTTaGACGCGATGGGCTGCACCGCAGGGCGAACCTTCCCTGCGCAGT +
Preference number: 5 (lower is better)
Translates to: QTRRSPSTEKGSLSG*TRWAAPQGEPSLRS
Trigger: ACTGCGCAGGGAAGGTTCGCCCTGCGGTGCAGCCCATCGCGTGCAACCGGAGAGACTGCCCTTCTCGGTGGATGGTGACCTCCTGGTCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS GCA 90 bp ATGACTCAGCGAGAAGGGCAGTCTCTCCGGTTGCACGCGATGGGCTaGACCGCAGGGCGAACCTTCCCTGCGCAGTGGGCAGGGTTGACC +
Preference number: 5 (lower is better)
Translates to: MTQREGQSLRLHAMG*TAGRTFPAQWAGLT
Trigger: GGTCAACCCTGCCCACTGCGCAGGGAAGGTTCGCCCTGCGGTGCAGCCCATCGCGTGCAACCGGAGAGACTGCCCTTCTCGCTGAGTCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380538.4
CDS CCA 90 bp AGGCCCCGCTTCTCCGCCTTGCTGCCGTTGGAGAAGATCCCGTTCTaGTGTTTGTGGGTCTGCAGGGCCTCCTTCGGGCCGCCCTTCCTC +
Preference number: 5 (lower is better)
Translates to: RPRFSALLPLEKIPF*CLWVCRASFGPPFL
Trigger: GAGGAAGGGCGGCCCGAAGGAGGCCCTGCAGACCCACAAACACCAGAACGGGATCTTCTCCAACGGCAGCAAGGCGGAGAAGCGGGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CCA 90 bp TTGCACTGGCCCCAGCTGGAGAAGGCCCACTCCACACACAGCTGCTaGTTACAGGCCTGGGTGTCCACAGGCCGCTTGGCGACCTGGGTG +
Preference number: 5 (lower is better)
Translates to: LHWPQLEKAHSTHSC*LQAWVSTGRLATWV
Trigger: CACCCAGGTCGCCAAGCGGCCTGTGGACACCCAGGCCTGTAACCAGCAGCTGTGTGTGGAGTGGGCCTTCTCCAGCTGGGGCCAGTGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS GCA 90 bp GCCTTGCTGCCGTTGGAGAAGATCCCGTTCTGGTGTTTGTGGGTCTaGAGGGCCTCCTTCGGGCCGCCCTTCCTCCCCGCAAGCACCTCT +
Preference number: 5 (lower is better)
Translates to: ALLPLEKIPFWCLWV*RASFGPPFLPASTS
Trigger: AGAGGTGCTTGCGGGGAGGAAGGGCGGCCCGAAGGAGGCCCTGCAGACCCACAAACACCAGAACGGGATCTTCTCCAACGGCAGCAAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CCA 90 bp TTCTCCGCCTTGCTGCCGTTGGAGAAGATCCCGTTCTGGTGTTTGTaGGTCTGCAGGGCCTCCTTCGGGCCGCCCTTCCTCCCCGCAAGC +
Preference number: 5 (lower is better)
Translates to: FSALLPLEKIPFWCL*VCRASFGPPFLPAS
Trigger: GCTTGCGGGGAGGAAGGGCGGCCCGAAGGAGGCCCTGCAGACCCACAAACACCAGAACGGGATCTTCTCCAACGGCAGCAAGGCGGAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS TCA 90 bp CCGCCCTGCAGGAGTACAGGCCCTGATCCGAGGAGGACACGTTTGTaGGCAGCAAGGAGCCTTCGTGCAGATGGTGCGGGGAGCCCAGTT +
Preference number: 5 (lower is better)
Translates to: PPCRSTGPDPRRTRL*AARSLRADGAGSPV
Trigger: AACTGGGCTCCCCGCACCATCTGCACGAAGGCTCCTTGCTGCTCACAAACGTGTCCTCCTCGGATCAGGGCCTGTACTCCTGCAGGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000380559.7
ENST00000388710.8
ENST00000542621.5
ENST00000680146.1
CDS GCA 90 bp CTGCTCGGTCACCATGGTGAAGGGCAGGTGCAGGAGCACTTGCTCTaGACCCGGGTCCTCCTCCGAGGTCGTGTTCCTTTCCGCAGAGTC +
Preference number: 5 (lower is better)
Translates to: LLGHHGEGQVQEHLL*TRVLLRGRVPFRRV
Trigger: GACTCTGCGGAAAGGAACACGACCTCGGAGGAGGACCCGGGTGCAGAGCAAGTGCTCCTGCACCTGCCCTTCACCATGGTGACCGAGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS-3UTR CAA 90 bp AGCTTAGGTTCTGTCCGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGGCCGGGCCACGAGCTaGCGGTTGCCTCCGATGAGC +
Preference number: 5 (lower is better)
Translates to: SLGSVRGGCVSPSCGQGRGRATS*RLPPMS
Trigger: GCTCATCGGAGGCAACCGCAAGCTCGTGGCCCGGCC...TCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCGGACAGAACCTAAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS GCA 90 bp AGCCAGACACGTGTTTATGAGGCGAGAGAGTCACTGGGGAAGTCCTaGGCTCCGAGGGCTTCAGGAGCGTGTCCTGGTGCTCCAGGTGGC +
Preference number: 5 (lower is better)
Translates to: SQTRVYEARESLGKS*APRASGACPGAPGG
Trigger: GCCACCTGGAGCACCAGGACACGCTCCTGAAGCCCTCGGAGCGCAGGACTTCCCCAGTGACTCTCTCGCCTCATAAACACGTGTCTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS GCA 90 bp CTCAACTCCACCACCAGCTCACAATCCCTGGGGAAGCTGACCCCATaGCCTATGCTCAGGGTCGGTCCCAGGGACTGCTCTCTGCACTCG +
Preference number: 5 (lower is better)
Translates to: LNSTTSSQSLGKLTP*PMLRVGPRDCSLHS
Trigger: CGAGTGCAGAGAGCAGTCCCTGGGACCGACCCTGAGCATAGGGCATGGGGTCAGCTTCCCCAGGGATTGTGAGCTGGTGGTGGAGTTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS GCA 90 bp GCTTCAGTGCGGCCGCGGAGCGGGTCTGCTTTGAATGGGAGCGCGTaGGCTGGGGGTGGGGGCGTTATTTGTGAATGTGCTGCTTGTCTT +
Preference number: 5 (lower is better)
Translates to: ASVRPRSGSALNGSA*AGGGGVICECAACL
Trigger: AAGACAAGCAGCACATTCACAAATAACGCCCCCACCCCCAGCGCACGCGCTCCCATTCAAAGCAGACCCGCTCCGCGGCCGCACTGAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000680146.1
CDS CCA 90 bp CAGCTGGAGAAGGCCCACTCCACACACAGCTGCTGGTTACAGGCCTaGGTGTCCACAGGCCGCTTGGCGACCTGGGTGCACATGTCATTG +
Preference number: 5 (lower is better)
Translates to: QLEKAHSTHSCWLQA*VSTGRLATWVHMSL
Trigger: CAATGACATGTGCACCCAGGTCGCCAAGCGGCCTGTGGACACCCAGGCCTGTAACCAGCAGCTGTGTGTGGAGTGGGCCTTCTCCAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS-3UTR CAA 90 bp GAGAGGGAGGGTGTACTGTGGACACGCATAAACCCATTGTCCCACCCCGGTCCCCGCTGGGATGCTGGCTaGGGCCCTTCACACTCGTCA +
Preference number: 5 (lower is better)
Translates to: EREGVLWTRINPLSHPGPRWDAG*GPSHSS
Trigger: TGACGAGTGTGAAGGGCCCAAGCCAGCATCCCAGCG...GGGACCGGGGTGGGACAATGGGTTTATGCGTGTCCACAGTACACCCTCCCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CAA 90 bp TGGGGACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCAGGGCTCTGAGCATTGCCTTCCCCGCAGCTaGTGGAACACTCTGTCCAGT +
Preference number: 5 (lower is better)
Translates to: WGLPRSAVLCCGQQGSEHCLPRS*WNTLSS
Trigger: ACTGGACAGAGTGTTCCACAAGCTGCGGGGAAGGCA...ATGCTCAGAGCCCTGCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CAA 90 bp GGAGAGGGAGGGTGTACTGTGGACACGCATAAACCCATTGTCCCACCCCGGTCCTGGGCCGCTGAGATCTaGCGCAGGATGGTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: GEGGCTVDTHKPIVPPRSWAAEI*RRMVGL
Trigger: CAAGCCCACCATCCTGCGCAAGATCTCAGCGGCCCA...GGACCGGGGTGGGACAATGGGTTTATGCGTGTCCACAGTACACCCTCCCTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CAA 90 bp AGTGGGGACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCAGGGCTCTGAGCAGAGGCTTTCAGCTTTaGACAGGTCACCCTGCGGGT +
Preference number: 5 (lower is better)
Translates to: SGDSHAAQCSVVGSRALSRGFQL*TGHPAG
Trigger: ACCCGCAGGGTGACCTGTCAAAAGCTGAAAGCCTCT...GCTCAGAGCCCTGCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTCCCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CAA 90 bp AGTGGGGACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCAGGGCTCTGAGCGTTGACTCTGATAGCTaGGGAAGTGGGGACTCCCAC +
Preference number: 5 (lower is better)
Translates to: SGDSHAAQCSVVGSRALSVDSDS*GSGDSH
Trigger: GTGGGAGTCCCCACTTCCCAAGCTATCAGAGTCAAC...GCTCAGAGCCCTGCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTCCCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS TCA 90 bp CCCAGGATCCAGGACCAGCTGTGTTCCCAGAGGAGACGTCAGCACTaGAGGAAGGTTCGGTCCAGTGGCAGCGAGCAAGGCCCTGATGTC +
Preference number: 5 (lower is better)
Translates to: PRIQDQLCSQRRRQH*RKVRSSGSEQGPDV
Trigger: GACATCAGGGCCTTGCTCGCTGCCACTGGACCGAACCTTCCTTCAGTGCTGACGTCTCCTCTGGGAACACAGCTGGTCCTGGATCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000380559.7
ENST00000388710.8
ENST00000542621.5
ENST00000680146.1
CDS GCA 90 bp GCTGGTTACAGGCCTGGGTGTCCACAGGCCGCTTGGCGACCTGGGTaGACATGTCATTGGACACAGGGGTGGAGATCCCAGAGGCTTTCA +
Preference number: 5 (lower is better)
Translates to: AGYRPGCPQAAWRPG*TCHWTQGWRSQRLS
Trigger: TGAAAGCCTCTGGGATCTCCACCCCTGTGTCCAATGACATGTGCACCCAGGTCGCCAAGCGGCCTGTGGACACCCAGGCCTGTAACCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CCA 90 bp GGGGAACTGGAGGCTGATTTCCTCCAGCACTGGGCCAATAGCACCTaGCTCTCTCAGGGCCAGGATGGAGATCATGGAAGCCCTTGGGGC +
Preference number: 5 (lower is better)
Translates to: GELEADFLQHWANST*LSQGQDGDHGSPWG
Trigger: GCCCCAAGGGCTTCCATGATCTCCATCCTGGCCCTGAGAGAGCCAGGTGCTATTGGCCCAGTGCTGGAGGAAATCAGCCTCCAGTTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS-3UTR CAA 90 bp AGTGGGGACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCAGGGCTCTGAGCTCCATGCTTGGATCCTaGCCGGAATCAGAATCGGAC +
Preference number: 5 (lower is better)
Translates to: SGDSHAAQCSVVGSRALSSMLGS*PESESD
Trigger: GTCCGATTCTGATTCCGGCAAGGATCCAAGCATGGA...GCTCAGAGCCCTGCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTCCCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CAA 90 bp GACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCAGGGCTCTGAGCATGCGCGCTGGCAGGCAGGTTTaGAAGCTGAACAGAAGGTCT +
Preference number: 5 (lower is better)
Translates to: DSHAAQCSVVGSRALSMRAGRQV*KLNRRS
Trigger: AGACCTTCTGTTCAGCTTCAAAACCTGCCTGCCAGC...GCGCATGCTCAGAGCCCTGCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CAA 90 bp CGAGCATTCTGCTTCCCACCCAAACCTAGGTTCTGCCAGCTCACTGAGACCCACATGGCCGCCCGGGCCTaGCACAGGTTGCCAGCATAC +
Preference number: 5 (lower is better)
Translates to: RAFCFPPKPRFCQLTETHMAARA*HRLPAY
Trigger: GTATGCTGGCAACCTGTGCAAGGCCCGGGCGGCCAT...GTGGGTCTCAGTGAGCTGGCAGAACCTAGGTTTGGGTGGGAAGCAGAATGCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CAA 90 bp GGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTAGCGCAGTGGGCAGGGTaGACCTCCGTGCTGTTCAGC +
Preference number: 5 (lower is better)
Translates to: GGCVSPSCGQGRVFPHTLAQWAG*TSVLFS
Trigger: GCTGAACAGCACGGAGGTCAACCCTGCCCACTGCGC...TAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CAA 90 bp GGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTGGGCAGTCTCTCCGGTaGCACGCGATGGGCTGCACC +
Preference number: 5 (lower is better)
Translates to: GCVSPSCGQGRVFPHTLSGQSLR*HAMGCT
Trigger: GGTGCAGCCCATCGCGTGCAACCGGAGAGACTGCCC...AGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CAA 90 bp GGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTAGTGTCCACAGGCCGCTaGGCGACCTGGGTGCACATG +
Preference number: 5 (lower is better)
Translates to: GGCVSPSCGQGRVFPHTLVSTGR*ATWVHM
Trigger: CATGTGCACCCAGGTCGCCAAGCGGCCTGTGGACAC...TAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380545.9
ENST00000380548.9
CDS-3UTR CAA 90 bp GGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTACCGATGCAAGGCCCATaGCACTGGCCCCAGCTGGAG +
Preference number: 5 (lower is better)
Translates to: GGCVSPSCGQGRVFPHTLPMQGP*HWPQLE
Trigger: CTCCAGCTGGGGCCAGTGCAATGGGCCTTGCATCGG...TAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380545.9
ENST00000380548.9
CDS-3UTR CAA 90 bp GCCTTACTGCATGGCGAGACCCACCTCTCACTGGCTTTGCTGCAGCTGCACAGGTCAGGCACTGCCTTGTaGGTGCGGGCATGCACACAC +
Preference number: 5 (lower is better)
Translates to: ALLHGETHLSLALLQLHRSGTAL*VRACTH
Trigger: GTGTGTGCATGCCCGCACCAACAAGGCAGTGCCTGA...CCTGTGCAGCTGCAGCAAAGCCAGTGAGAGGTGGGTCTCGCCATGCAGTAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CAA 90 bp AGTGGGGACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCAGGGCTCTGAGCCCCTATCTTCACGCTTaGCCACAAGTTCCACAGCAG +
Preference number: 5 (lower is better)
Translates to: SGDSHAAQCSVVGSRALSPYLHA*PQVPQQ
Trigger: CTGCTGTGGAACTTGTGGCAAAGCGTGAAGATAGGG...GCTCAGAGCCCTGCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTCCCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS GCA 90 bp AGGAATTTCCCCGCTGCATGGGCCTGCATAACAGGCACGCTGGGATaGTGGCTTGGGCCCTTCACACTCGTCAATAGGCAGGTCAGCCAC +
Preference number: 5 (lower is better)
Translates to: RNFPAAWACITGTLG*WLGPFTLVNRQVSH
Trigger: GTGGCTGACCTGCCTATTGACGAGTGTGAAGGGCCCAAGCCAGCATCCCAGCGTGCCTGTTATGCAGGCCCATGCAGCGGGGAAATTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276935.6
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS GCA 90 bp CTCCAGCCTAACTTTGACAGAGCTCAGCCACTTGCTCCCCAAGGCTaGCAACAGCAGGGGTGGCACCAGCCTGCAGCTGTCTGGCTGAAT +
Preference number: 5 (lower is better)
Translates to: LQPNFDRAQPLAPQG*QQQGWHQPAAVWLN
Trigger: ATTCAGCCAGACAGCTGCAGGCTGGTGCCACCCCTGCTGTTGGCAGCCTTGGGGAGCAAGTGGCTGAGCTCTGTCAAAGTTAGGCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS CCA 90 bp AATTTCCCCGCTGCATGGGCCTGCATAACAGGCACGCTGGGATGCTaGCTTGGGCCCTTCACACTCGTCAATAGGCAGGTCAGCCACGGA +
Preference number: 5 (lower is better)
Translates to: NFPAAWACITGTLGC*LGPFTLVNRQVSHG
Trigger: TCCGTGGCTGACCTGCCTATTGACGAGTGTGAAGGGCCCAAGCCAGCATCCCAGCGTGCCTGTTATGCAGGCCCATGCAGCGGGGAAATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276935.6
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CCA 90 bp CTAGGATCAGCAGCTGGGTGCTCTCAGTCAGCTCTCCATGAAGATTaGCCGCCCTGCAGGAGTACAGGCCCTGATCCGAGGAGGACACGT +
Preference number: 5 (lower is better)
Translates to: LGSAAGCSQSALHED*PPCRSTGPDPRRTR
Trigger: ACGTGTCCTCCTCGGATCAGGGCCTGTACTCCTGCAGGGCGGCCAATCTTCATGGAGAGCTGACTGAGAGCACCCAGCTGCTGATCCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000380559.7
ENST00000388710.8
ENST00000542621.5
ENST00000680146.1
CDS-3UTR CAA 90 bp GAGAGGGAGGGTGTACTGTGGACACGCATAAACCCATTGTCCCACCCCGGTCCCCAGGACTCGGAGCACTaGGTGAACCCCTCATACTCC +
Preference number: 5 (lower is better)
Translates to: EREGVLWTRINPLSHPGPQDSEH*VNPSYS
Trigger: GGAGTATGAGGGGTTCACCAAGTGCTCCGAGTCCTG...GGGACCGGGGTGGGACAATGGGTTTATGCGTGTCCACAGTACACCCTCCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CAA 90 bp GGAGAGGGAGGGTGTACTGTGGACACGCATAAACCCATTGTCCCACCCCGGTCCGCCACGAGCTTGCGGTaGCCTCCGATGAGCTTAATC +
Preference number: 5 (lower is better)
Translates to: GEGGCTVDTHKPIVPPRSATSLR*PPMSLI
Trigger: GATTAAGCTCATCGGAGGCAACCGCAAGCTCGTGGC...GGACCGGGGTGGGACAATGGGTTTATGCGTGTCCACAGTACACCCTCCCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CAA 90 bp GGCAGAGTTTCAGCTGTTTCACCTTCTCGCAGTACCTGGTGGTGTCTCTGCACTGGGCAGTCTCTCCGGTaGCACGCGATGGGCTGCACC +
Preference number: 5 (lower is better)
Translates to: GRVSAVSPSRSTWWCLCTGQSLR*HAMGCT
Trigger: GGTGCAGCCCATCGCGTGCAACCGGAGAGACTGCCC...AGTGCAGAGACACCACCAGGTACTGCGAGAAGGTGAAACAGCTGAAACTCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542621.5
CDS-3UTR CAA 90 bp CGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCTCAGGCACTGCCTTGTaGGTGCGGGCATGCACACAC +
Preference number: 5 (lower is better)
Translates to: RGGCVSPSCGQGRVFPHTSGTAL*VRACTH
Trigger: GTGTGTGCATGCCCGCACCAACAAGGCAGTGCCTGA...GGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR CAA 90 bp CGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCTGCTCAGGCACTGCCTaGTTGGTGCGGGCATGCACA +
Preference number: 5 (lower is better)
Translates to: RGGCVSPSCGQGRVFPHTCSGTA*LVRACT
Trigger: TGTGCATGCCCGCACCAACAAGGCAGTGCCTGAGCA...GGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR CAA 90 bp GACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCAGGGCTCTGAGCATGCGCTCTGGAATGAAGAGGTaGCTACAACCTGACAGCCTG +
Preference number: 5 (lower is better)
Translates to: DSHAAQCSVVGSRALSMRSGMKR*LQPDSL
Trigger: CAGGCTGTCAGGTTGTAGCAACCTCTTCATTCCAGA...GCGCATGCTCAGAGCCCTGCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS TCA 90 bp CCATCCCGTGTCTGGCAGAAGACTTGTCTGTGTTGCACAGCTAGGTaGGGCCCGATGCAAGGCCCATTGCACGAGAAGGGCAGTCTCTCC +
Preference number: 5 (lower is better)
Translates to: PSRVWQKTCLCCTAR*GPMQGPLHEKGSLS
Trigger: GGAGAGACTGCCCTTCTCGTGCAATGGGCCTTGCATCGGGCCTCACCTAGCTGTGCAACACAGACAAGTCTTCTGCCAGACACGGGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542621.5
CDS GCA 90 bp TGTCTCGTCTGGGTTGAACTCAGGAATTTCCCCGCTGCATGGGCCTaGATAACAGGCACGCTGGGATGCTGGCTTGGGCCCTTCACACTC +
Preference number: 5 (lower is better)
Translates to: CLVWVELRNFPAAWA*ITGTLGCWLGPFTL
Trigger: GAGTGTGAAGGGCCCAAGCCAGCATCCCAGCGTGCCTGTTATGCAGGCCCATGCAGCGGGGAAATTCCTGAGTTCAACCCAGACGAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276935.6
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CCA 90 bp GCCAGACTGACTGCAGGGGAACTGGAGGCTGATTTCCTCCAGCACTaGGCCAATAGCACCTGGCTCTCTCAGGGCCAGGATGGAGATCAT +
Preference number: 5 (lower is better)
Translates to: ARLTAGELEADFLQH*ANSTWLSQGQDGDH
Trigger: ATGATCTCCATCCTGGCCCTGAGAGAGCCAGGTGCTATTGGCCCAGTGCTGGAGGAAATCAGCCTCCAGTTCCCCTGCAGTCAGTCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS-3UTR CAA 90 bp CCCATGTCTGGTTCACTCCTGATGTGCCTCAGAAGGACAGGCTTCCTCTTTGGGGCAGTGTGCCAGGAGTaGCCCGACGGCAGCATTCCA +
Preference number: 5 (lower is better)
Translates to: PMSGSLLMCLRRTGFLFGAVCQE*PDGSIP
Trigger: TGGAATGCTGCCGTCGGGCAACTCCTGGCACACTGC...CCCAAAGAGGAAGCCTGTCCTTCTGAGGCACATCAGGAGTGAACCAGACATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380570.8
CDS-3UTR CAA 90 bp TGGGGACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCAGGGCTCTGAGCATGTTCAACAACCAGGGTaGTTCCTTTGGCTTGGCACT +
Preference number: 5 (lower is better)
Translates to: WGLPRSAVLCCGQQGSEHVQQPG*FLWLGT
Trigger: AGTGCCAAGCCAAAGGAACAACCCTGGTTGTTGAAC...ATGCTCAGAGCCCTGCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CAA 90 bp GAGTGTGGAGCTGCTCAGGGTACCCGGTGGGGCCATGATGATGAGAGGGAAGAGCCACAGTTATCTTCCTaGACGGTGCTTCCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: ECGAAQGTRWGHDDEREEPQLSS*TVLPSW
Trigger: CCAGCTGGGAAGCACCGTCAAGGAAGATAACTGTGG...CTCTTCCCTCTCATCATCATGGCCCCACCGGGTACCCTGAGCAGCTCCACACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR CAA 90 bp GCTCAGGGTACCCGGTGGGGCCATGATGATGAGAGGGAAGAGTGGACTTACTCTGGGCAGTCAAAAATGTaGCAGGGCTGCGCGATGGGC +
Preference number: 5 (lower is better)
Translates to: AQGTRWGHDDEREEWTYSGQSKM*QGCAMG
Trigger: GCCCATCGCGCAGCCCTGCAACATTTTTGACTGCCC...AGAGTAAGTCCACTCTTCCCTCTCATCATCATGGCCCCACCGGGTACCCTGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR CAA 90 bp GCCTTACTGCATGGCGAGACCCACCTCTCACTGGCTTTGCTGCAGCTGCACAGGGGGCAGGGATCCAAATaGCAGGACTTCAGGAGCTGT +
Preference number: 5 (lower is better)
Translates to: ALLHGETHLSLALLQLHRGQGSK*QDFRSC
Trigger: ACAGCTCCTGAAGTCCTGCAATTTGGATCCCTGCCC...CCTGTGCAGCTGCAGCAAAGCCAGTGAGAGGTGGGTCTCGCCATGCAGTAAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CAA 90 bp GGACCACGAGTCCCAGCAGTTTTAAGCAAGTCCCAGGCACTGACTCCTCGGCACGTCTTGCCTGTTGGCTaGACAGCTGGCTGGTGGGAA +
Preference number: 5 (lower is better)
Translates to: GPRVPAVLSKSQALTPRHVLPVG*TAGWWE
Trigger: TTCCCACCAGCCAGCTGTCAAGCCAACAGGCAAGAC...GTGCCGAGGAGTCAGTGCCTGGGACTTGCTTAAAACTGCTGGGACTCGTGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CAA 90 bp TGGGGAAGAGGAGACAAAGGAGCAAAACACTCCTGTGTTTGTGATAGTGCGCTTCAGGTGATGAGGGGCTaGCGGACCCTGCGCGCCGGG +
Preference number: 5 (lower is better)
Translates to: WGRGDKGAKHSCVCDSALQVMRG*RTLRAG
Trigger: CCCGGCGCGCAGGGTCCGCAAGCCCCTCATCACCTG...AAGCGCACTATCACAAACACAGGAGTGTTTTGCTCCTTTGTCTCCTCTTCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CAA 90 bp GGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCAGGCACTGCCTTGTaGGTGCGGGCATGCACACAC +
Preference number: 5 (lower is better)
Translates to: GGCVSPSCGQGRVFPHTLSGTAL*VRACTH
Trigger: GTGTGTGCATGCCCGCACCAACAAGGCAGTGCCTGA...TAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR CAA 90 bp GATAGCTTGGGAAGTGGGGACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCCCTCTTTCTAGGTCTTaGAGACCCAGGTTTGGGAGG +
Preference number: 5 (lower is better)
Translates to: DSLGSGDSHAAQCSVVGSPLSRS*RPRFGR
Trigger: CCTCCCAAACCTGGGTCTCAAAGACCTAGAAAGAGG...GCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTCCCCACTTCCCAAGCTATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CAA 90 bp AGCTTAGGTTCTGTCCGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGGACTCTGGCCACCCTaGCTCCTAAACTCAGGCCAC +
Preference number: 5 (lower is better)
Translates to: SLGSVRGGCVSPSCGQGRGLWPP*LLNSGH
Trigger: GTGGCCTGAGTTTAGGAGCAAGGGTGGCCAGAGTCC...TCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCGGACAGAACCTAAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS TCA 90 bp GGTGGCTGCAGAAGACGTCTCTGGTCTGTAGGCCGACCCCACATGTaGGACTACATGGACTCCACTTGCCAATTTCCCACCTTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: GGCRRRLWSVGRPHM*DYMDSTCQFPTLLG
Trigger: GCCCAGCAAGGTGGGAAATTGGCAAGTGGAGTCCATGTAGTCTCACATGTGGGGTCGGCCTACAGACCAGAGACGTCTTCTGCAGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS TCA 90 bp AAGCTGCCATCAGCCATGCGCTGCTTGCAAAGAACCTCACGTTTCTaGACACCCCCGCCACACGTTCTGGAACACGGCTGCCACTGTGCA +
Preference number: 5 (lower is better)
Translates to: KLPSAMRCLQRTSRF*TPPPHVLEHGCHCA
Trigger: TGCACAGTGGCAGCCGTGTTCCAGAACGTGTGGCGGGGGTGTTCAGAAACGTGAGGTTCTTTGCAAGCAGCGCATGGCTGATGGCAGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS GCA 90 bp ACCACAGTATCATCCGATTTGGTTGCGGAGAGCTGGGATTTATACTaGCCTCGGACCAGCCGGCAGGTGGACCCATCTCCGTTGCAGACC +
Preference number: 5 (lower is better)
Translates to: TTVSSDLVAESWDLY*PRTSRQVDPSPLQT
Trigger: GGTCTGCAACGGAGATGGGTCCACCTGCCGGCTGGTCCGAGGGCAGTATAAATCCCAGCTCTCCGCAACCAAATCGGATGATACTGTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276935.6
ENST00000327883.11
ENST00000380548.9
ENST00000380566.8
ENST00000680146.1
CDS GCA 90 bp GGGAAGCTGACCCCATGCCCTATGCTCAGGGTCGGTCCCAGGGACTaGTCTCTGCACTCGATGCTCTATGGGGAATTTGCAGAAGGTTCT +
Preference number: 5 (lower is better)
Translates to: GKLTPCPMLRVGPRD*SLHSMLYGEFAEGS
Trigger: AGAACCTTCTGCAAATTCCCCATAGAGCATCGAGTGCAGAGAGCAGTCCCTGGGACCGACCCTGAGCATAGGGCATGGGGTCAGCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS CCA 90 bp GAGAGGCCGGTTTTCAGCATCTTTCGGCAAATGGCGCTTCGAGTCTaGGTGCCTTCCCCGCAGCTTGTGGAACACTCTGTCCAGTCTGAG +
Preference number: 5 (lower is better)
Translates to: ERPVFSIFRQMALRV*VPSPQLVEHSVQSE
Trigger: CTCAGACTGGACAGAGTGTTCCACAAGCTGCGGGGAAGGCACCCAGACTCGAAGCGCCATTTGCCGAAAGATGCTGAAAACCGGCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CCA 90 bp CACATTAGCCAAGTCAAGGGTGGAGGCCGCCGTGCTTGGGCTGCATaGCATGCACGATCCTTGTGTAGGTCTTGTTGGAGGCTCTCAGAC +
Preference number: 5 (lower is better)
Translates to: HISQVKGGGRRAWAA*HARSLCRSCWRLSD
Trigger: GTCTGAGAGCCTCCAACAAGACCTACACAAGGATCGTGCATGCCATGCAGCCCAAGCACGGCGGCCTCCACCCTTGACTTGGCTAATGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS-3UTR CAA 90 bp CTCAGAAGGACAGGCTTCCTCTTTGGGACTGCAGCTGGTAACCTGACTTGTCCCCTTCCTTCACAGCTCTaGCTGCTCAGGCAGCGCCTC +
Preference number: 5 (lower is better)
Translates to: LRRTGFLFGTAAGNLTCPLPSQL*LLRQRL
Trigger: GAGGCGCTGCCTGAGCAGCAAGAGCTGTGAAGGAAG...GGGACAAGTCAGGTTACCAGCTGCAGTCCCAAAGAGGAAGCCTGTCCTTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380570.8
CDS-3UTR CAA 90 bp GGACCACGAGTCCCAGCAGTTTTAAGCAAGTCCCAGGCACTGACTCCTCGGCACGGGCAGGGATCCAAATaGCAGGACTTCAGGAGCTGT +
Preference number: 5 (lower is better)
Translates to: GPRVPAVLSKSQALTPRHGQGSK*QDFRSC
Trigger: ACAGCTCCTGAAGTCCTGCAATTTGGATCCCTGCCC...GTGCCGAGGAGTCAGTGCCTGGGACTTGCTTAAAACTGCTGGGACTCGTGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CAA 90 bp GATAGCTTGGGAAGTGGGGACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCCTACATGGACTCCACTaGCCAATTTCCCACCTTGCT +
Preference number: 5 (lower is better)
Translates to: DSLGSGDSHAAQCSVVGSLHGLH*PISHLA
Trigger: AGCAAGGTGGGAAATTGGCAAGTGGAGTCCATGTAG...GCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTCCCCACTTCCCAAGCTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CAA 90 bp TGCCTGGCCTGCTCTGCAACCTCCTTTAGACATCTGTCCTTTCCTTTCCCAACATGCACCGTGCTGGGCTaGGGCTGGCGACACAGCTCA +
Preference number: 5 (lower is better)
Translates to: CLACSATSFRHLSFPFPTCTVLG*GWRHSS
Trigger: TGAGCTGTGTCGCCAGCCCAAGCCCAGCACGGTGCA...TGTTGGGAAAGGAAAGGACAGATGTCTAAAGGAGGTTGCAGAGCAGGCCAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CAA 90 bp TGGGCCATTCATGCTCAAAATGGCCCTGGCCCACAGCAGCAGTTAGTTAGTGCGTCCGCCTTGCTGCCGTaGGAGAAGATCCCGTTCTGG +
Preference number: 5 (lower is better)
Translates to: WAIHAQNGPGPQQQLVSASALLP*EKIPFW
Trigger: CCAGAACGGGATCTTCTCCAACGGCAGCAAGGCGGA...CGCACTAACTAACTGCTGCTGTGGGCCAGGGCCATTTTGAGCATGAATGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CAA 90 bp GATAGCTTGGGAAGTGGGGACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCTGCGGGGAGCCCAGTTaGCTTTTATTCCTGAACCAA +
Preference number: 5 (lower is better)
Translates to: DSLGSGDSHAAQCSVVGSCGEPS*LLFLNQ
Trigger: TTGGTTCAGGAATAAAAGCAAACTGGGCTCCCCGCA...GCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTCCCCACTTCCCAAGCTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CAA 90 bp CGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCGCAGCTGAATTCCCCTaGAGACCCACCGCTAAGGTT +
Preference number: 5 (lower is better)
Translates to: RGGCVSPSCGQGRVFPHTAAEFP*RPTAKV
Trigger: AACCTTAGCGGTGGGTCTCAAGGGGAATTCAGCTGC...GGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR CAA 90 bp GGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTAGGAGGCTGAGCAGGTaGCCAGTCTGTCCACAGACC +
Preference number: 5 (lower is better)
Translates to: GCVSPSCGQGRVFPHTLSRRLSR*PVCPQT
Trigger: GGTCTGTGGACAGACTGGCAACCTGCTCAGCCTCCT...AGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CAA 90 bp TGGGCCAGCTCTGGAATGAAGAGGTTGCTACAACCTGACAGCCTGACAGATACTGTGTCCACAGGCCGCTaGGCGACCTGGGTGCACATG +
Preference number: 5 (lower is better)
Translates to: WASSGMKRLLQPDSLTDTVSTGR*ATWVHM
Trigger: CATGTGCACCCAGGTCGCCAAGCGGCCTGTGGACAC...AGTATCTGTCAGGCTGTCAGGTTGTAGCAACCTCTTCATTCCAGAGCTGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CAA 90 bp CTCACAGGCCTCGGAAGAGCACTGCACTGCTCTGATGGTAAGGTGATGCCATCCTTCTGTCCGAGGTGGTaGCGTGAGTCCTTCGTGTGG +
Preference number: 5 (lower is better)
Translates to: LTGLGRALHCSDGKVMPSFCPRW*RESFVW
Trigger: CCACACGAAGGACTCACGCAACCACCTCGGACAGAA...GGATGGCATCACCTTACCATCAGAGCAGTGCAGTGCTCTTCCGAGGCCTGTGAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542621.5
CDS-3UTR CAA 90 bp GCCTTACTGCATGGCGAGACCCACCTCTCACTGGCTTTGCTGCAGCTGCACAGGCCTCTTTCTAGGTCTTaGAGACCCAGGTTTGGGAGG +
Preference number: 5 (lower is better)
Translates to: ALLHGETHLSLALLQLHRPLSRS*RPRFGR
Trigger: CCTCCCAAACCTGGGTCTCAAAGACCTAGAAAGAGG...CCTGTGCAGCTGCAGCAAAGCCAGTGAGAGGTGGGTCTCGCCATGCAGTAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CAA 90 bp CTGCAGGCCTCTGACCAGCAGTTCTGGGTGCTCACAGGCCTCGGAAGAGCACTGCTCCACCACCCCGCCTaGCTAGATAAATACTACATG +
Preference number: 5 (lower is better)
Translates to: LQASDQQFWVLTGLGRALLHHPA*LDKYYM
Trigger: CATGTAGTATTTATCTAGCAAGGCGGGGTGGTGGAG...CAGTGCTCTTCCGAGGCCTGTGAGCACCCAGAACTGCTGGTCAGAGGCCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542621.5
CDS TCA 90 bp CGAAATCCTGCAGGCCACCAAAGAGCCCATCTGTCTCGTCTGGGTTaGACTCAGGAATTTCCCCGCTGCATGGGCCTGCATAACAGGCAC +
Preference number: 5 (lower is better)
Translates to: RNPAGHQRAHLSRLG*TQEFPRCMGLHNRH
Trigger: GTGCCTGTTATGCAGGCCCATGCAGCGGGGAAATTCCTGAGTTCAACCCAGACGAGACAGATGGGCTCTTTGGTGGCCTGCAGGATTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276935.6
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS TCA 90 bp GGAAGAGAAAGGCAGGGGCGGGCACAGGGTGGAATTGACAACCGTTaGGAGGCCGGTTTTCAGCATCTTTCGGCAAATGGCGCTTCGAGT +
Preference number: 5 (lower is better)
Translates to: GRERQGRAQGGIDNR*EAGFQHLSANGASS
Trigger: ACTCGAAGCGCCATTTGCCGAAAGATGCTGAAAACCGGCCTCTCAACGGTTGTCAATTCCACCCTGTGCCCGCCCCTGCCTTTCTCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS GCA 90 bp GGCCGGTTTTCAGCATCTTTCGGCAAATGGCGCTTCGAGTCTGGGTaGCTTCCCCGCAGCTTGTGGAACACTCTGTCCAGTCTGAGAGAA +
Preference number: 5 (lower is better)
Translates to: GRFSASFGKWRFESG*LPRSLWNTLSSLRE
Trigger: TTCTCTCAGACTGGACAGAGTGTTCCACAAGCTGCGGGGAAGGCACCCAGACTCGAAGCGCCATTTGCCGAAAGATGCTGAAAACCGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS GCA 90 bp TCTCTGTGTGTCTTACATTTGGTTGCGGAGAGCTGGGATTTATACTaGCCTCGGACCAGCCGGCAGGTGGACCCATCTCCGTTGCAGACC +
Preference number: 5 (lower is better)
Translates to: SLCVLHLVAESWDLY*PRTSRQVDPSPLQT
Trigger: GGTCTGCAACGGAGATGGGTCCACCTGCCGGCTGGTCCGAGGGCAGTATAAATCCCAGCTCTCCGCAACCAAATGTAAGACACACAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380570.8
CDS CCA 90 bp TGGGGCTTTGTTTTTGGGCTACAGCCTCCTGTGTGCATTCCTCGATaGTCGATGCAGAGGACCACACGGTATCTGAGGCCCTGGCCACAT +
Preference number: 5 (lower is better)
Translates to: WGFVFGLQPPVCIPR*SMQRTTRYLRPWPH
Trigger: ATGTGGCCAGGGCCTCAGATACCGTGTGGTCCTCTGCATCGACCATCGAGGAATGCACACAGGAGGCTGTAGCCCAAAAACAAAGCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276935.6
ENST00000327883.11
ENST00000380548.9
ENST00000546040.1
ENST00000680146.1
CDS CCA 90 bp GAACTGAACTTCTTCTCCATTCCTGGCCCAGCTGATGGTAGGCCTTaGGTGGCCGATGGCCTCACAGTGCAGAAGAACACTCAGTGTCCC +
Preference number: 5 (lower is better)
Translates to: ELNFFSIPGPADGRP*VADGLTVQKNTQCP
Trigger: GGGACACTGAGTGTTCTTCTGCACTGTGAGGCCATCGGCCACCCAAGGCCTACCATCAGCTGGGCCAGGAATGGAGAAGAAGTTCAGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CCA 90 bp AACATACCGCACATTAGCCAAGTCAAGGGTGGAGGCCGCCGTGCTTaGGCTGCATGGCATGCACGATCCTTGTGTAGGTCTTGTTGGAGG +
Preference number: 5 (lower is better)
Translates to: NIPHISQVKGGGRRA*AAWHARSLCRSCWR
Trigger: CCTCCAACAAGACCTACACAAGGATCGTGCATGCCATGCAGCCCAAGCACGGCGGCCTCCACCCTTGACTTGGCTAATGTGCGGTATGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS-3UTR CAA 90 bp CCAGGGTGGCCTTACTGCATGGCGAGACCCACCTCTCACTGGCTTTGCTGCAGCAACCTCCTCCACAGGTaGCTGAGCAAGGAAAGAAAT +
Preference number: 5 (lower is better)
Translates to: PGWPYCMARPTSHWLCCSNLLHR*LSKERN
Trigger: ATTTCTTTCCTTGCTCAGCAACCTGTGGAGGAGGTT...GCTGCAGCAAAGCCAGTGAGAGGTGGGTCTCGCCATGCAGTAAGGCCACCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CAA 90 bp CTGCCTCAGCATGGTGTCCCCTCCCCATTTGTCCTAACTGTGACTAAAGGGACAGGGCAGTCAAAAATGTaGCAGGGCTGCGCGATGGGC +
Preference number: 5 (lower is better)
Translates to: LPQHGVPSPFVLTVTKGTGQSKM*QGCAMG
Trigger: GCCCATCGCGCAGCCCTGCAACATTTTTGACTGCCC...TGTCCCTTTAGTCACAGTTAGGACAAATGGGGAGGGGACACCATGCTGAGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CAA 90 bp GAGAGGGAGGGTGTACTGTGGACACGCATAAACCCATTGTCCCACCCCGGTCCCTTGAACCATGGCAACTaGGCCTCGACTGGAAGTTTC +
Preference number: 5 (lower is better)
Translates to: EREGVLWTRINPLSHPGPLNHGN*ASTGSF
Trigger: GAAACTTCCAGTCGAGGCCAAGTTGCCATGGTTCAA...GGGACCGGGGTGGGACAATGGGTTTATGCGTGTCCACAGTACACCCTCCCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CAA 90 bp GAGTGGCATTTCATGAGGGGAGGCTTATCTGTGGGTAAGGGACTCTGGCCACCCGGCAGCATTCCATGCTaGGATCCTTGCCGGAATCAG +
Preference number: 5 (lower is better)
Translates to: EWHFMRGGLSVGKGLWPPGSIPC*DPCRNQ
Trigger: CTGATTCCGGCAAGGATCCAAGCATGGAATGCTGCC...GGGTGGCCAGAGTCCCTTACCCACAGATAAGCCTCCCCTCATGAAATGCCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CAA 90 bp CCATTGTCCCACCCCGGTCCCTGGGCCAGCTCTGGAATGAAGAGGTTGCTACAATCAGCCATGCGCTGCTaGCAAAGAACCTCACGTTTC +
Preference number: 5 (lower is better)
Translates to: PLSHPGPWASSGMKRLLQSAMRC*QRTSRF
Trigger: GAAACGTGAGGTTCTTTGCAAGCAGCGCATGGCTGA...TTGTAGCAACCTCTTCATTCCAGAGCTGGCCCAGGGACCGGGGTGGGACAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CAA 90 bp ATGAAGAGGTTGCTACAACCTGACAGCCTGACAGATACTCTCTGGCACAGTGACGCGCAGTGGGCAGGGTaGACCTCCGTGCTGTTCAGC +
Preference number: 5 (lower is better)
Translates to: MKRLLQPDSLTDTLWHSDAQWAG*TSVLFS
Trigger: GCTGAACAGCACGGAGGTCAACCCTGCCCACTGCGC...GTCACTGTGCCAGAGAGTATCTGTCAGGCTGTCAGGTTGTAGCAACCTCTTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CAA 90 bp GAGAAAGGAGCGGGCCAGGCTATGTTACAGTTCAGGAAGGGTATAAAAGGACATGGGCAGTCTCTCCGGTaGCACGCGATGGGCTGCACC +
Preference number: 5 (lower is better)
Translates to: EKGAGQAMLQFRKGIKGHGQSLR*HAMGCT
Trigger: GGTGCAGCCCATCGCGTGCAACCGGAGAGACTGCCC...ATGTCCTTTTATACCCTTCCTGAACTGTAACATAGCCTGGCCCGCTCCTTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380538.4
CDS-3UTR CAA 90 bp GGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTAAGAGGCTTTCAGCTTTaGACAGGTCACCCTGCGGGT +
Preference number: 5 (lower is better)
Translates to: GGCVSPSCGQGRVFPHTLRGFQL*TGHPAG
Trigger: ACCCGCAGGGTGACCTGTCAAAAGCTGAAAGCCTCT...TAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380545.9
ENST00000380548.9
CDS-3UTR CAA 90 bp GGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATGGGTGCACATGTCATaGGACACAGGGGTGGAGATC +
Preference number: 5 (lower is better)
Translates to: GGCVSPSCGQGRVFPHTLWVHMS*DTGVEI
Trigger: GATCTCCACCCCTGTGTCCAATGACATGTGCACCCA...TAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380545.9
ENST00000380548.9
CDS-3UTR CAA 90 bp ATGAAGAGGTTGCTACAACCTGACAGCCTGACAGATACTCTCTGGCACAGTGACCCGATGCAAGGCCCATaGCACTGGCCCCAGCTGGAG +
Preference number: 5 (lower is better)
Translates to: MKRLLQPDSLTDTLWHSDPMQGP*HWPQLE
Trigger: CTCCAGCTGGGGCCAGTGCAATGGGCCTTGCATCGG...GTCACTGTGCCAGAGAGTATCTGTCAGGCTGTCAGGTTGTAGCAACCTCTTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CAA 90 bp AGTGGGGACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCAGGGCTCTGAGCTTTAAACTGGCTGAGTaGGCAGAGTTTCAGCTGTTT +
Preference number: 5 (lower is better)
Translates to: SGDSHAAQCSVVGSRALSFKLAE*AEFQLF
Trigger: AAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAA...GCTCAGAGCCCTGCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTCCCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CAA 90 bp GGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTTTCTGTCCGAGGTGGTaGCGTGAGTCCTTCGTGTGG +
Preference number: 5 (lower is better)
Translates to: GCVSPSCGQGRVFPHTLSFCPRW*RESFVW
Trigger: CCACACGAAGGACTCACGCAACCACCTCGGACAGAA...AGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CAA 90 bp GAGAGGGAGGGTGTACTGTGGACACGCATAAACCCATTGTCCCACCCCGGTCCCCTCCACCACCCCGCCTaGCTAGATAAATACTACATG +
Preference number: 5 (lower is better)
Translates to: EREGVLWTRINPLSHPGPLHHPA*LDKYYM
Trigger: CATGTAGTATTTATCTAGCAAGGCGGGGTGGTGGAG...GGGACCGGGGTGGGACAATGGGTTTATGCGTGTCCACAGTACACCCTCCCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS TCA 90 bp GGCAGGTGGACCCATCTCCGTTGCAGACCCCACAGTTATCTTCCTTaGCGGTGCTTCCCAGCTGGTGATCGCAGCCAACAATTTGGCATA +
Preference number: 5 (lower is better)
Translates to: GRWTHLRCRPHSYLP*RCFPAGDRSQQFGI
Trigger: TATGCCAAATTGTTGGCTGCGATCACCAGCTGGGAAGCACCGTCAAGGAAGATAACTGTGGGGTCTGCAACGGAGATGGGTCCACCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276935.6
ENST00000327883.11
ENST00000380548.9
ENST00000380566.8
ENST00000380570.8
ENST00000680146.1
CDS CCA 90 bp CTCGTCGAAATCCTGCAGGCCACCAAAGAGCCCATCTGTCTCGTCTaGGTTGAACTCAGGAATTTCCCCGCTGCATGGGCCTGCATAACA +
Preference number: 5 (lower is better)
Translates to: LVEILQATKEPICLV*VELRNFPAAWACIT
Trigger: TGTTATGCAGGCCCATGCAGCGGGGAAATTCCTGAGTTCAACCCAGACGAGACAGATGGGCTCTTTGGTGGCCTGCAGGATTTCGACGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276935.6
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS-3UTR CAA 90 bp CCCATGTCTGGTTCACTCCTGATGTGCCTCAGAAGGACAGGCTTCCTCTTTGGGCCACAGTTATCTTCCTaGACGGTGCTTCCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: PMSGSLLMCLRRTGFLFGPQLSS*TVLPSW
Trigger: CCAGCTGGGAAGCACCGTCAAGGAAGATAACTGTGG...CCCAAAGAGGAAGCCTGTCCTTCTGAGGCACATCAGGAGTGAACCAGACATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380570.8
CDS-3UTR CAA 90 bp GATAGCTTGGGAAGTGGGGACTCCCACGCAGCGCAGTGCTCTGTTGTGGGCAGCCCCGAGTTACGAATCTaGACAATGAAATCTGCTGTG +
Preference number: 5 (lower is better)
Translates to: DSLGSGDSHAAQCSVVGSPELRI*TMKSAV
Trigger: CACAGCAGATTTCATTGTCAAGATTCGTAACTCGGG...GCTGCCCACAACAGAGCACTGCGCTGCGTGGGAGTCCCCACTTCCCAAGCTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CAA 90 bp GAGTGTGGAGCTGCTCAGGGTACCCGGTGGGGCCATGATGATGAGAGGGAAGAGTCGGTGGATGATGGGTaGATAGAAGATGAACTGGAC +
Preference number: 5 (lower is better)
Translates to: ECGAAQGTRWGHDDEREESVDDG*IEDELD
Trigger: GTCCAGTTCATCTTCTATCAACCCATCATCCACCGA...CTCTTCCCTCTCATCATCATGGCCCCACCGGGTACCCTGAGCAGCTCCACACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR CAA 90 bp GAGTGTGGAGCTGCTCAGGGTACCCGGTGGGGCCATGATGATGAGAGGGAAGAGAACCTCCTCCACAGGTaGCTGAGCAAGGAAAGAAAT +
Preference number: 5 (lower is better)
Translates to: ECGAAQGTRWGHDDEREENLLHR*LSKERN
Trigger: ATTTCTTTCCTTGCTCAGCAACCTGTGGAGGAGGTT...CTCTTCCCTCTCATCATCATGGCCCCACCGGGTACCCTGAGCAGCTCCACACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR CAA 90 bp ACGAGTCCCAGCAGTTTTAAGCAAGTCCCAGGCACTGACTCCTCGGCACTGCCTTCTGTCTCGTCTGGGTaGAACTCAGGAATTTCCCCG +
Preference number: 5 (lower is better)
Translates to: TSPSSFKQVPGTDSSALPSVSSG*NSGISP
Trigger: CGGGGAAATTCCTGAGTTCAACCCAGACGAGACAGA...AGGCAGTGCCGAGGAGTCAGTGCCTGGGACTTGCTTAAAACTGCTGGGACTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CAA 90 bp GCTCAGGGTACCCGGTGGGGCCATGATGATGAGAGGGAAGAGTGGACTTACTCTTCCATGCTTGGATCCTaGCCGGAATCAGAATCGGAC +
Preference number: 5 (lower is better)
Translates to: AQGTRWGHDDEREEWTYSSMLGS*PESESD
Trigger: GTCCGATTCTGATTCCGGCAAGGATCCAAGCATGGA...AGAGTAAGTCCACTCTTCCCTCTCATCATCATGGCCCCACCGGGTACCCTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR CAA 90 bp CCCCATGTCTGGTTCACTCCTGATGTGCCTCAGAAGGACAGGCTTCCTCTTTGGGGCAGCATTCCATGCTaGGATCCTTGCCGGAATCAG +
Preference number: 5 (lower is better)
Translates to: PHVWFTPDVPQKDRLPLWGSIPC*DPCRNQ
Trigger: CTGATTCCGGCAAGGATCCAAGCATGGAATGCTGCC...CCAAAGAGGAAGCCTGTCCTTCTGAGGCACATCAGGAGTGAACCAGACATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380570.8
CDS-3UTR CAA 90 bp CTGCCTCAGCATGGTGTCCCCTCCCCATTTGTCCTAACTGTGACTAAAGGGACAAAAGCGGTTACAAGCTaGCACCGTGCTGGGCTTGGG +
Preference number: 5 (lower is better)
Translates to: LPQHGVPSPFVLTVTKGTKAVTS*HRAGLG
Trigger: CCCAAGCCCAGCACGGTGCAAGCTTGTAACCGCTTT...TGTCCCTTTAGTCACAGTTAGGACAAATGGGGAGGGGACACCATGCTGAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CAA 90 bp GAGTGGCATTTCATGAGGGGAGGCTTATCTGTGGGTAAGGGACTCTGGCCACCCGGACAGTCATCTTTCTaGCATGCTTGCTGGCAGGCA +
Preference number: 5 (lower is better)
Translates to: EWHFMRGGLSVGKGLWPPGQSSF*HACWQA
Trigger: TGCCTGCCAGCAAGCATGCAAGAAAGATGACTGTCC...GGGTGGCCAGAGTCCCTTACCCACAGATAAGCCTCCCCTCATGAAATGCCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CAA 90 bp TGTCTTCCTCTCAAATTTTACTTCCAGGCTGGCTGGAAATGCAGCCCTGATGTCCGCAGGATGGTGGGCTaGCGGTGTGGCCTTCGAGAG +
Preference number: 5 (lower is better)
Translates to: CLPLKFYFQAGWKCSPDVRRMVG*RCGLRE
Trigger: CTCTCGAAGGCCACACCGCAAGCCCACCATCCTGCG...GACATCAGGGCTGCATTTCCAGCCAGCCTGGAAGTAAAATTTGAGAGGAAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CAA 90 bp GGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTGCAGCTGAATTCCCCTaGAGACCCACCGCTAAGGTT +
Preference number: 5 (lower is better)
Translates to: GCVSPSCGQGRVFPHTLSAAEFP*RPTAKV
Trigger: AACCTTAGCGGTGGGTCTCAAGGGGAATTCAGCTGC...AGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR CAA 90 bp CCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTTCACGCTTTGCCGCAGCTGAATTCCCCTaGAGACCCACCGCTAAGGTT +
Preference number: 5 (lower is better)
Translates to: PSCGQGRVFPHTLSSRFAAAEFP*RPTAKV
Trigger: AACCTTAGCGGTGGGTCTCAAGGGGAATTCAGCTGC...GGCAAAGCGTGAAGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR CAA 90 bp GAGAAAGGAGCGGGCCAGGCTATGTTACAGTTCAGGAAGGGTATAAAAGGACATGCGCAGTGGGCAGGGTaGACCTCCGTGCTGTTCAGC +
Preference number: 5 (lower is better)
Translates to: EKGAGQAMLQFRKGIKGHAQWAG*TSVLFS
Trigger: GCTGAACAGCACGGAGGTCAACCCTGCCCACTGCGC...ATGTCCTTTTATACCCTTCCTGAACTGTAACATAGCCTGGCCCGCTCCTTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380538.4
CDS-3UTR CAA 90 bp CACACCCTATCTTCACGCTTTGCCACAAGTTCCACAGCAGCGAGATTTAAACTGGCGCAGTGGGCAGGGTaGACCTCCGTGCTGTTCAGC +
Preference number: 5 (lower is better)
Translates to: HTLSSRFATSSTAARFKLAQWAG*TSVLFS
Trigger: GCTGAACAGCACGGAGGTCAACCCTGCCCACTGCGC...CAGTTTAAATCTCGCTGCTGTGGAACTTGTGGCAAAGCGTGAAGATAGGGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542621.5
CDS-3UTR CAA 90 bp GGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTACCCTATCTTCACGCTTaGCCACAAGTTCCACAGCAG +
Preference number: 5 (lower is better)
Translates to: GGCVSPSCGQGRVFPHTLPYLHA*PQVPQQ
Trigger: CTGCTGTGGAACTTGTGGCAAAGCGTGAAGATAGGG...TAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR CAA 90 bp CTCACAGGCCTCGGAAGAGCACTGCACTGCTCTGATGGTAAGGTGATGCCATCCCCCTATCTTCACGCTTaGCCACAAGTTCCACAGCAG +
Preference number: 5 (lower is better)
Translates to: LTGLGRALHCSDGKVMPSPYLHA*PQVPQQ
Trigger: CTGCTGTGGAACTTGTGGCAAAGCGTGAAGATAGGG...GGATGGCATCACCTTACCATCAGAGCAGTGCAGTGCTCTTCCGAGGCCTGTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542621.5
CDS-3UTR CAA 90 bp GCCTTACTGCATGGCGAGACCCACCTCTCACTGGCTTTGCTGCAGCTGCACAGGGGCTTAATGAGGATTTaGCCGAAGAGTCCCAGAGTT +
Preference number: 5 (lower is better)
Translates to: ALLHGETHLSLALLQLHRGLMRI*PKSPRV
Trigger: AACTCTGGGACTCTTCGGCAAAATCCTCATTAAGCC...CCTGTGCAGCTGCAGCAAAGCCAGTGAGAGGTGGGTCTCGCCATGCAGTAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CAA 90 bp TGGGCCAGCTCTGGAATGAAGAGGTTGCTACAACCTGACAGCCTGACAGATACTGGACTCTGGCCACCCTaGCTCCTAAACTCAGGCCAC +
Preference number: 5 (lower is better)
Translates to: WASSGMKRLLQPDSLTDTGLWPP*LLNSGH
Trigger: GTGGCCTGAGTTTAGGAGCAAGGGTGGCCAGAGTCC...AGTATCTGTCAGGCTGTCAGGTTGTAGCAACCTCTTCATTCCAGAGCTGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS TCA 90 bp CGCGATGGGCATCTTAGGGGTGTACATGCATTTCCACTCTTCCACTaGAGTGACATGCCCCTGGATGTCCTCCTCCACACAGGAAACTGC +
Preference number: 5 (lower is better)
Translates to: RDGHLRGVHAFPLFH*SDMPLDVLLHTGNC
Trigger: GCAGTTTCCTGTGTGGAGGAGGACATCCAGGGGCATGTCACTTCAGTGGAAGAGTGGAAATGCATGTACACCCCTAAGATGCCCATCGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000276935.6
ENST00000327883.11
ENST00000380548.9
ENST00000380566.8
ENST00000546040.1
ENST00000680146.1
CDS TCA 90 bp CCATCCCGTGTCTGGCAGAAGACTTGTCTGTGTTGCACAGCTAGGTaGGGCCCGATGCAAGGCCCATTGCACTGGAAAGCAGAAAAAGGT +
Preference number: 5 (lower is better)
Translates to: PSRVWQKTCLCCTAR*GPMQGPLHWKAEKG
Trigger: ACCTTTTTCTGCTTTCCAGTGCAATGGGCCTTGCATCGGGCCTCACCTAGCTGTGCAACACAGACAAGTCTTCTGCCAGACACGGGATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS GCA 90 bp AGCAGGATGAGAAGCCAGGCCTCTTGGTTGCCTAACAAAGAACGTTaGAGGCGTTCCATGCTGAGTCGATACTGCTTCTTGCTGGGCAGG +
Preference number: 5 (lower is better)
Translates to: SRMRSQASWLPNKER*RRSMLSRYCFLLGR
Trigger: CCTGCCCAGCAAGAAGCAGTATCGACTCAGCATGGAACGCCTGCAACGTTCTTTGTTAGGCAACCAAGAGGCCTGGCTTCTCATCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS GCA 90 bp GTGTGCCAGGAGTTGCCCGACGGCAGCATTCCATGCTTGGATCCTTaGCGGAATCAGAATCGGACACTGAATAAGCTGCTAAGTGCTCCT +
Preference number: 5 (lower is better)
Translates to: VCQELPDGSIPCLDP*RNQNRTLNKLLSAP
Trigger: AGGAGCACTTAGCAGCTTATTCAGTGTCCGATTCTGATTCCGGCAAGGATCCAAGCATGGAATGCTGCCGTCGGGCAACTCCTGGCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327883.11
ENST00000380548.9
ENST00000380566.8
ENST00000380570.8
ENST00000431052.6
CDS GCA 90 bp GAAAGAGGAGCAGTGTGCCAGGAGTTGCCCGACGGCAGCATTCCATaGTTGGATCCTTGCCGGAATCAGAATCGGACACTGAATAAGCTG +
Preference number: 5 (lower is better)
Translates to: ERGAVCQELPDGSIP*LDPCRNQNRTLNKL
Trigger: CAGCTTATTCAGTGTCCGATTCTGATTCCGGCAAGGATCCAAGCATGGAATGCTGCCGTCGGGCAACTCCTGGCACACTGCTCCTCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327883.11
ENST00000380548.9
ENST00000380566.8
ENST00000380570.8
ENST00000431052.6
CDS GCA 90 bp CAACAAGTCCAAAGGTCGCCCATCTCTGTGTGTCTTACATTTGGTTaGGGAGAGCTGGGATTTATACTGCCCTCGGACCAGCCGGCAGGT +
Preference number: 5 (lower is better)
Translates to: QQVQRSPISVCLTFG*GELGFILPSDQPAG
Trigger: ACCTGCCGGCTGGTCCGAGGGCAGTATAAATCCCAGCTCTCCGCAACCAAATGTAAGACACACAGAGATGGGCGACCTTTGGACTTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380570.8
CDS GCA 90 bp GCCCTATGCTCAGGGTCGGTCCCAGGGACTGCTCTCTGCACTCGATaGTCTATGGGGAATTTGCAGAAGGTTCTTTGGGGTTGGAACATA +
Preference number: 5 (lower is better)
Translates to: ALCSGSVPGTALCTR*SMGNLQKVLWGWNI
Trigger: TATGTTCCAACCCCAAAGAACCTTCTGCAAATTCCCCATAGAGCATCGAGTGCAGAGAGCAGTCCCTGGGACCGACCCTGAGCATAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS CCA 90 bp CGCAGCTTGTGGAACACTCTGTCCAGTCTGAGAGAAGCCACTCGCTaGGACAGTCATCTTTCTTGCATGCTTGCTGGCAGGCAGGTTTTG +
Preference number: 5 (lower is better)
Translates to: RSLWNTLSSLREATR*DSHLSCMLAGRQVL
Trigger: CAAAACCTGCCTGCCAGCAAGCATGCAAGAAAGATGACTGTCCCAGCGAGTGGCTTCTCTCAGACTGGACAGAGTGTTCCACAAGCTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CCA 90 bp TCCGAGGAGGACACGTTTGTGAGCAGCAAGGAGCCTTCGTGCAGATaGTGCGGGGAGCCCAGTTTGCTTTTATTCCTGAACCAAGTGACT +
Preference number: 5 (lower is better)
Translates to: SEEDTFVSSKEPSCR*CGEPSLLLFLNQVT
Trigger: AGTCACTTGGTTCAGGAATAAAAGCAAACTGGGCTCCCCGCACCATCTGCACGAAGGCTCCTTGCTGCTCACAAACGTGTCCTCCTCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000380559.7
ENST00000388710.8
ENST00000542621.5
ENST00000680146.1
CDS-3UTR CAA 90 bp CTATTCGTTTTGGTGCTCAAAGAAGGGTTTAGGGACCACGAGTCCCAGCAGTTTGCAGTGTGCCAGGAGTaGCCCGACGGCAGCATTCCA +
Preference number: 5 (lower is better)
Translates to: LFVLVLKEGFRDHESQQFAVCQE*PDGSIP
Trigger: TGGAATGCTGCCGTCGGGCAACTCCTGGCACACTGC...AAACTGCTGGGACTCGTGGTCCCTAAACCCTTCTTTGAGCACCAAAACGAATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CAA 90 bp ATGAAGAGGTTGCTACAACCTGACAGCCTGACAGATACTCTCTGGCACAGTGACCTTCCTTCACAGCTCTaGCTGCTCAGGCAGCGCCTC +
Preference number: 5 (lower is better)
Translates to: MKRLLQPDSLTDTLWHSDLPSQL*LLRQRL
Trigger: GAGGCGCTGCCTGAGCAGCAAGAGCTGTGAAGGAAG...GTCACTGTGCCAGAGAGTATCTGTCAGGCTGTCAGGTTGTAGCAACCTCTTCAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CAA 90 bp GAGAGGGAGGGTGTACTGTGGACACGCATAAACCCATTGTCCCACCCCGGTCCCTATCATCCGATTTGGTaGCGGAGAGCTGGGATTTAT +
Preference number: 5 (lower is better)
Translates to: EREGVLWTRINPLSHPGPYHPIW*RRAGIY
Trigger: ATAAATCCCAGCTCTCCGCAACCAAATCGGATGATA...GGGACCGGGGTGGGACAATGGGTTTATGCGTGTCCACAGTACACCCTCCCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CAA 90 bp GAGTGTGGAGCTGCTCAGGGTACCCGGTGGGGCCATGATGATGAGAGGGAAGAGTATCATCCGATTTGGTaGCGGAGAGCTGGGATTTAT +
Preference number: 5 (lower is better)
Translates to: ECGAAQGTRWGHDDEREEYHPIW*RRAGIY
Trigger: ATAAATCCCAGCTCTCCGCAACCAAATCGGATGATA...CTCTTCCCTCTCATCATCATGGCCCCACCGGGTACCCTGAGCAGCTCCACACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR CAA 90 bp CGAGCATTCTGCTTCCCACCCAAACCTAGGTTCTGCCAGCTCACTGAGACCCACACAGTATCATCCGATTaGGTTGCGGAGAGCTGGGAT +
Preference number: 5 (lower is better)
Translates to: RAFCFPPKPRFCQLTETHTVSSD*VAESWD
Trigger: ATCCCAGCTCTCCGCAACCAAATCGGATGATACTGT...GTGGGTCTCAGTGAGCTGGCAGAACCTAGGTTTGGGTGGGAAGCAGAATGCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CAA 90 bp GCTCAGGGTACCCGGTGGGGCCATGATGATGAGAGGGAAGAGTGGACTTACTCTACAGTATCATCCGATTaGGTTGCGGAGAGCTGGGAT +
Preference number: 5 (lower is better)
Translates to: AQGTRWGHDDEREEWTYSTVSSD*VAESWD
Trigger: ATCCCAGCTCTCCGCAACCAAATCGGATGATACTGT...AGAGTAAGTCCACTCTTCCCTCTCATCATCATGGCCCCACCGGGTACCCTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR CAA 90 bp GCCTTACTGCATGGCGAGACCCACCTCTCACTGGCTTTGCTGCAGCTGCACAGGTACTTCCATAGGGAATaGCAACCACAGTATCATCCG +
Preference number: 5 (lower is better)
Translates to: ALLHGETHLSLALLQLHRYFHRE*QPQYHP
Trigger: CGGATGATACTGTGGTTGCAATTCCCTATGGAAGTA...CCTGTGCAGCTGCAGCAAAGCCAGTGAGAGGTGGGTCTCGCCATGCAGTAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CAA 90 bp CGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCTCGGTGGATGATGGGTaGATAGAAGATGAACTGGAC +
Preference number: 5 (lower is better)
Translates to: RGGCVSPSCGQGRVFPHTSVDDG*IEDELD
Trigger: GTCCAGTTCATCTTCTATCAACCCATCATCCACCGA...GGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CAA 90 bp CCTCCTTCCACATTAGCCAGCAGCCTTCATTGTCTTGTGGTGCTGCTGAGTTGCGGCTCCCGAGTCTGTTaGTTCAAGCAGCTCACCACA +
Preference number: 5 (lower is better)
Translates to: PPSTLASSLHCLVVLLSCGSRVC*FKQLTT
Trigger: TGTGGTGAGCTGCTTGAACAAACAGACTCGGGAGCC...GCAACTCAGCAGCACCACAAGACAATGAAGGCTGCTGGCTAATGTGGAAGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CAA 90 bp GGTTCACTCCTGATGTGCCTCAGAAGGACAGGCTTCCTCTTTGGGACTGCAGCTTCCATGCTTGGATCCTaGCCGGAATCAGAATCGGAC +
Preference number: 5 (lower is better)
Translates to: GSLLMCLRRTGFLFGTAASMLGS*PESESD
Trigger: GTCCGATTCTGATTCCGGCAAGGATCCAAGCATGGA...AGCTGCAGTCCCAAAGAGGAAGCCTGTCCTTCTGAGGCACATCAGGAGTGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380570.8
CDS-3UTR CAA 90 bp TTGTGTTTTAGAGGAGAAAGTGCCTCCTTCCACATTAGCCAGCAGCCTTCATTGCAGGTGCAGGAGCACTaGCTCTGCACCCGGGTCCTC +
Preference number: 5 (lower is better)
Translates to: LCFRGESASFHISQQPSLQVQEH*LCTRVL
Trigger: GAGGACCCGGGTGCAGAGCAAGTGCTCCTGCACCTG...CAATGAAGGCTGCTGGCTAATGTGGAAGGAGGCACTTTCTCCTCTAAAACACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CAA 90 bp GGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATGCGGGGAGCCCAGTTaGCTTTTATTCCTGAACCAA +
Preference number: 5 (lower is better)
Translates to: GGCVSPSCGQGRVFPHTLCGEPS*LLFLNQ
Trigger: TTGGTTCAGGAATAAAAGCAAACTGGGCTCCCCGCA...TAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR CAA 90 bp CCCTATCTTCACGCTTTGCCACAAGTTCCACAGCAGCGAGATTTAAACTGGCTGTCAGGCACTGCCTTGTaGGTGCGGGCATGCACACAC +
Preference number: 5 (lower is better)
Translates to: PYLHALPQVPQQRDLNWLSGTAL*VRACTH
Trigger: GTGTGTGCATGCCCGCACCAACAAGGCAGTGCCTGA...CAGCCAGTTTAAATCTCGCTGCTGTGGAACTTGTGGCAAAGCGTGAAGATAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR CAA 90 bp CTGCCTCAGCATGGTGTCCCCTCCCCATTTGTCCTAACTGTGACTAAAGGGACAGTTGACTCTGATAGCTaGGGAAGTGGGGACTCCCAC +
Preference number: 5 (lower is better)
Translates to: LPQHGVPSPFVLTVTKGTVDSDS*GSGDSH
Trigger: GTGGGAGTCCCCACTTCCCAAGCTATCAGAGTCAAC...TGTCCCTTTAGTCACAGTTAGGACAAATGGGGAGGGGACACCATGCTGAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CAA 90 bp CCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTTCACGCTTTGCCTGCACAGGCAGGACGTaGACTCTGATAGCTTGGGAA +
Preference number: 5 (lower is better)
Translates to: PSCGQGRVFPHTLSSRFACTGRT*TLIAWE
Trigger: TTCCCAAGCTATCAGAGTCAACGTCCTGCCTGTGCA...GGCAAAGCGTGAAGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542621.5
CDS-3UTR CAA 90 bp GAGTGGCATTTCATGAGGGGAGGCTTATCTGTGGGTAAGGGACTCTGGCCACCCTCTGGAATGAAGAGGTaGCTACAACCTGACAGCCTG +
Preference number: 5 (lower is better)
Translates to: EWHFMRGGLSVGKGLWPPSGMKR*LQPDSL
Trigger: CAGGCTGTCAGGTTGTAGCAACCTCTTCATTCCAGA...GGGTGGCCAGAGTCCCTTACCCACAGATAAGCCTCCCCTCATGAAATGCCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CAA 90 bp GCCTTACTGCATGGCGAGACCCACCTCTCACTGGCTTTGCTGCAGCTGCACAGGGGAGCTGGAGGATGCTaGCTCTTTAGGAAATGTAAA +
Preference number: 5 (lower is better)
Translates to: ALLHGETHLSLALLQLHRGAGGC*LFRKCK
Trigger: TTTACATTTCCTAAAGAGCAAGCATCCTCCAGCTCC...CCTGTGCAGCTGCAGCAAAGCCAGTGAGAGGTGGGTCTCGCCATGCAGTAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS GCA 90 bp GAGGAGGACACGTTTGTGAGCAGCAAGGAGCCTTCGTGCAGATGGTaGGGGGAGCCCAGTTTGCTTTTATTCCTGAACCAAGTGACTTCA +
Preference number: 5 (lower is better)
Translates to: EEDTFVSSKEPSCRW*GEPSLLLFLNQVTS
Trigger: TGAAGTCACTTGGTTCAGGAATAAAAGCAAACTGGGCTCCCCGCACCATCTGCACGAAGGCTCCTTGCTGCTCACAAACGTGTCCTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000380559.7
ENST00000388710.8
ENST00000542621.5
ENST00000680146.1
CDS GCA 90 bp GGGCCAGGATGGAGATCATGGAAGCCCTTGGGGCATACCCTGTCATaGTTATATACACCTCTCTGCATACACCCATGCACCCCACTGAAA +
Preference number: 5 (lower is better)
Translates to: GPGWRSWKPLGHTLS*LYTPLCIHPCTPLK
Trigger: TTTCAGTGGGGTGCATGGGTGTATGCAGAGAGGTGTATATAAGCATGACAGGGTATGCCCCAAGGGCTTCCATGATCTCCATCCTGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS CCA 90 bp GGGCAATTAAAGCGGTTACAAGCTTGCACCGTGCTGGGCTTGGGCTaGCGACACAGCTCATCAGCCAGGATGACTGTTTCATTCATCTCT +
Preference number: 5 (lower is better)
Translates to: GQLKRLQACTVLGLG*RHSSSARMTVSFIS
Trigger: AGAGATGAATGAAACAGTCATCCTGGCTGATGAGCTGTGTCGCCAGCCCAAGCCCAGCACGGTGCAAGCTTGTAACCGCTTTAATTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CCA 90 bp GAGAGAAGCCACTCGCTGGGACAGTCATCTTTCTTGCATGCTTGCTaGCAGGCAGGTTTTGAAGCTGAACAGAAGGTCTCAGGAAGCTCC +
Preference number: 5 (lower is better)
Translates to: ERSHSLGQSSFLHAC*QAGFEAEQKVSGSS
Trigger: GGAGCTTCCTGAGACCTTCTGTTCAGCTTCAAAACCTGCCTGCCAGCAAGCATGCAAGAAAGATGACTGTCCCAGCGAGTGGCTTCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CCA 90 bp AAGTCAACAAGTCCAAAGGTCGCCCATCTCTGTGTGTCTTACATTTaGTTGCGGAGAGCTGGGATTTATACTGCCCTCGGACCAGCCGGC +
Preference number: 5 (lower is better)
Translates to: KSTSPKVAHLCVSYI*LRRAGIYTALGPAG
Trigger: GCCGGCTGGTCCGAGGGCAGTATAAATCCCAGCTCTCCGCAACCAAATGTAAGACACACAGAGATGGGCGACCTTTGGACTTGTTGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380570.8
CDS-3UTR CAA 90 bp ACTGAAAGAGAAAACACGCGGACGTCCTTATGCTTGAAGGTGGAGGTGGAGGAGCCACAGTTATCTTCCTaGACGGTGCTTCCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: TERENTRTSLCLKVEVEEPQLSS*TVLPSW
Trigger: CCAGCTGGGAAGCACCGTCAAGGAAGATAACTGTGG...CTCCTCCACCTCCACCTTCAAGCATAAGGACGTCCGCGTGTTTTCTCTTTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CAA 90 bp CGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCGTAATAGTGACAGTATaGGTCAGCAACCACACGGTT +
Preference number: 5 (lower is better)
Translates to: RGGCVSPSCGQGRVFPHTVIVTV*VSNHTV
Trigger: AACCGTGTGGTTGCTGACCAATACTGTCACTATTAC...GGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CAA 90 bp GGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTAACTCCCTGCACTGTTTaGATGGTGCTTCCTATATCG +
Preference number: 5 (lower is better)
Translates to: GGCVSPSCGQGRVFPHTLTPCTV*MVLPIS
Trigger: CGATATAGGAAGCACCATCAAAACAGTGCAGGGAGT...TAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CAA 90 bp GTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTTCACGCTGCGGGGAGCCCAGTTaGCTTTTATTCCTGAACCAA +
Preference number: 5 (lower is better)
Translates to: VSPSCGQGRVFPHTLSSRCGEPS*LLFLNQ
Trigger: TTGGTTCAGGAATAAAAGCAAACTGGGCTCCCCGCA...GCGTGAAGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR CAA 90 bp TGCCTGGCCTGCTCTGCAACCTCCTTTAGACATCTGTCCTTTCCTTTCCCAACAGCAGCTGAATTCCCCTaGAGACCCACCGCTAAGGTT +
Preference number: 5 (lower is better)
Translates to: CLACSATSFRHLSFPFPTAAEFP*RPTAKV
Trigger: AACCTTAGCGGTGGGTCTCAAGGGGAATTCAGCTGC...TGTTGGGAAAGGAAAGGACAGATGTCTAAAGGAGGTTGCAGAGCAGGCCAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CAA 90 bp CAGCAGCGAGATTTAAACTGGCTGAGTTGGCAGAGTTTCAGCTGTTTCACCTTCAGGAGGCTGAGCAGGTaGCCAGTCTGTCCACAGACC +
Preference number: 5 (lower is better)
Translates to: QQRDLNWLSWQSFSCFTFRRLSR*PVCPQT
Trigger: GGTCTGTGGACAGACTGGCAACCTGCTCAGCCTCCT...GAAGGTGAAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAATCTCGCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542621.5
CDS-3UTR CAA 90 bp AAACACTCCTGTGTTTGTGATAGTGCGCTTCTAGGAAAGACACAGGAATTTGTCGGGCAGTCTCTCCGGTaGCACGCGATGGGCTGCACC +
Preference number: 5 (lower is better)
Translates to: KHSCVCDSALLGKTQEFVGQSLR*HAMGCT
Trigger: GGTGCAGCCCATCGCGTGCAACCGGAGAGACTGCCC...GACAAATTCCTGTGTCTTTCCTAGAAGCGCACTATCACAAACACAGGAGTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CAA 90 bp GGAATTTGTCCAATGTTTGCACCAATAGGCTACAAACCTTCTGGCTCCCTGCTGTGCTCAGGCACTGCCTaGTTGGTGCGGGCATGCACA +
Preference number: 5 (lower is better)
Translates to: GICPMFAPIGYKPSGSLLCSGTA*LVRACT
Trigger: TGTGCATGCCCGCACCAACAAGGCAGTGCCTGAGCA...CAGCAGGGAGCCAGAAGGTTTGTAGCCTATTGGTGCAAACATTGGACAAATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CAA 90 bp TTAAACTGGCTGAGTTGGCAGAGTTTCAGCTGTTTCACCTTCTCGCAGTACCTGTGCTCAGGCACTGCCTaGTTGGTGCGGGCATGCACA +
Preference number: 5 (lower is better)
Translates to: LNWLSWQSFSCFTFSQYLCSGTA*LVRACT
Trigger: TGTGCATGCCCGCACCAACAAGGCAGTGCCTGAGCA...CAGGTACTGCGAGAAGGTGAAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR CAA 90 bp CTGCCTCAGCATGGTGTCCCCTCCCCATTTGTCCTAACTGTGACTAAAGGGACATGCACAGGCAGGACGTaGACTCTGATAGCTTGGGAA +
Preference number: 5 (lower is better)
Translates to: LPQHGVPSPFVLTVTKGTCTGRT*TLIAWE
Trigger: TTCCCAAGCTATCAGAGTCAACGTCCTGCCTGTGCA...TGTCCCTTTAGTCACAGTTAGGACAAATGGGGAGGGGACACCATGCTGAGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CAA 90 bp AGCCAGCAGCCTTCATTGTCTTGTGGTGCTGCTGAGTTGCAATTCACAGAACAAACACGCATAAACCCATaGTCCCACCCCGGTCCCTGG +
Preference number: 5 (lower is better)
Translates to: SQQPSLSCGAAELQFTEQTRINP*SHPGPW
Trigger: CCAGGGACCGGGGTGGGACAATGGGTTTATGCGTGT...TTGTTCTGTGAATTGCAACTCAGCAGCACCACAAGACAATGAAGGCTGCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CAA 90 bp GTTCATTATCGTTTTGGTGGAGGTGTTGTTCCCTGGCTGTTTAGTGGGGCCAGAGGACAGGCTTCCTCTTaGGGACTGCAGCTGGTAACC +
Preference number: 5 (lower is better)
Translates to: VHYRFGGGVVPWLFSGARGQASS*GLQLVT
Trigger: GGTTACCAGCTGCAGTCCCAAAGAGGAAGCCTGTCC...TCTGGCCCCACTAAACAGCCAGGGAACAACACCTCCACCAAAACGATAATGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380570.8
CDS TCA 90 bp TGTTGGGTGAGAAGCAGAGGTGTGATGGGCGCAGATCTGGTTGGCTaGGCAGGAGGCACTCTGTGCTCCTTTAGAGTTAACAGCATTTTC +
Preference number: 5 (lower is better)
Translates to: CWVRSRGVMGADLVG*AGGTLCSFRVNSIF
Trigger: GAAAATGCTGTTAACTCTAAAGGAGCACAGAGTGCCTCCTGCTCAGCCAACCAGATCTGCGCCCATCACACCTCTGCTTCTCACCCAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS GCA 90 bp TCTGAGAGAAGCCACTCGCTGGGACAGTCATCTTTCTTGCATGCTTaGTGGCAGGCAGGTTTTGAAGCTGAACAGAAGGTCTCAGGAAGC +
Preference number: 5 (lower is better)
Translates to: SERSHSLGQSSFLHA*WQAGFEAEQKVSGS
Trigger: GCTTCCTGAGACCTTCTGTTCAGCTTCAAAACCTGCCTGCCAGCAAGCATGCAAGAAAGATGACTGTCCCAGCGAGTGGCTTCTCTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS GCA 90 bp TTGAGACCCACCGCTAAGGTTTGCAACTTGAAGGATCTGTCCAGCTaGCAAGATGTGATGCGTCAGTCCTGTGGCAGTGACAATTGGCTG +
Preference number: 5 (lower is better)
Translates to: LRPTAKVCNLKDLSS*QDVMRQSCGSDNWL
Trigger: CAGCCAATTGTCACTGCCACAGGACTGACGCATCACATCTTGGCAGCTGGACAGATCCTTCAAGTTGCAAACCTTAGCGGTGGGTCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000380538.4
ENST00000380545.9
ENST00000380548.9
ENST00000380559.7
ENST00000388710.8
ENST00000542621.5
ENST00000680146.1
CDS GCA 90 bp GGGCATACCCTGTCATGCTTATATACACCTCTCTGCATACACCCATaGACCCCACTGAAATGCTCAACTCCACCACCAGCTCACAATCCC +
Preference number: 5 (lower is better)
Translates to: GHTLSCLYTPLCIHP*TPLKCSTPPPAHNP
Trigger: GGGATTGTGAGCTGGTGGTGGAGTTGAGCATTTCAGTGGGGTGCATGGGTGTATGCAGAGAGGTGTATATAAGCATGACAGGGTATGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS GCA 90 bp CCCCCAGCGTGTAAAAAGAAGTGGGCTATTTGCCTACATGGCGTCTaGCTTAGTGTTGGGAATTTATTGCTCAGTGAGGCCCAGTTGGGG +
Preference number: 5 (lower is better)
Translates to: PPACKKKWAICLHGV*LSVGNLLLSEAQLG
Trigger: CCCCAACTGGGCCTCACTGAGCAATAAATTCCCAACACTAAGGCAGACGCCATGTAGGCAAATAGCCCACTTCTTTTTACACGCTGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS-3UTR CAA 90 bp CCTCAATTACCCTTGAAAGGCAGTTGCTTCCCCGTGCTATTTGAGGGAACATTACTTCCTTCACAGCTCTaGCTGCTCAGGCAGCGCCTC +
Preference number: 5 (lower is better)
Translates to: PQLPLKGSCFPVLFEGTLLPSQL*LLRQRL
Trigger: GAGGCGCTGCCTGAGCAGCAAGAGCTGTGAAGGAAG...TAATGTTCCCTCAAATAGCACGGGGAAGCAACTGCCTTTCAAGGGTAATTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR CAA 90 bp TGCCTCAGAAGGACAGGCTTCCTCTTTGGGACTGCAGCTGGTAACCTGACTTGTCCTTTGGCTTGGCACTaGAGTGAACATGGGTTGTCA +
Preference number: 5 (lower is better)
Translates to: CLRRTGFLFGTAAGNLTCPLAWH*SEHGLS
Trigger: TGACAACCCATGTTCACTCAAGTGCCAAGCCAAAGG...ACAAGTCAGGTTACCAGCTGCAGTCCCAAAGAGGAAGCCTGTCCTTCTGAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380570.8
CDS-3UTR CAA 90 bp GCTCAGGGTACCCGGTGGGGCCATGATGATGAGAGGGAAGAGTGGACTTACTCTTACTTCCATAGGGAATaGCAACCACAGTATCATCCG +
Preference number: 5 (lower is better)
Translates to: AQGTRWGHDDEREEWTYSYFHRE*QPQYHP
Trigger: CGGATGATACTGTGGTTGCAATTCCCTATGGAAGTA...AGAGTAAGTCCACTCTTCCCTCTCATCATCATGGCCCCACCGGGTACCCTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR CAA 90 bp TGGGCCAGCTCTGGAATGAAGAGGTTGCTACAACCTGACAGCCTGACAGATACTTGTGGGGCTTTGTTTTaGGGCTACAGCCTCCTGTGT +
Preference number: 5 (lower is better)
Translates to: WASSGMKRLLQPDSLTDTCGALF*GYSLLC
Trigger: ACACAGGAGGCTGTAGCCCAAAAACAAAGCCCCACA...AGTATCTGTCAGGCTGTCAGGTTGTAGCAACCTCTTCATTCCAGAGCTGGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CAA 90 bp TTGTGTTTTAGAGGAGAAAGTGCCTCCTTCCACATTAGCCAGCAGCCTTCATTGATCCCGTTCTGGTGTTaGTGGGTCTGCAGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: LCFRGESASFHISQQPSLIPFWC*WVCRAS
Trigger: GGAGGCCCTGCAGACCCACAAACACCAGAACGGGAT...CAATGAAGGCTGCTGGCTAATGTGGAAGGAGGCACTTTCTCCTCTAAAACACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CAA 90 bp TTTGAGAAAGGAGCGGGCCAGGCTATGTTACAGTTCAGGAAGGGTATAAAAGGAAGGAGGCTGAGCAGGTaGCCAGTCTGTCCACAGACC +
Preference number: 5 (lower is better)
Translates to: FEKGAGQAMLQFRKGIKGRRLSR*PVCPQT
Trigger: GGTCTGTGGACAGACTGGCAACCTGCTCAGCCTCCT...TCCTTTTATACCCTTCCTGAACTGTAACATAGCCTGGCCCGCTCCTTTCTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380538.4
CDS-3UTR CAA 90 bp TTTAAACTGGCTGAGTTGGCAGAGTTTCAGCTGTTTCACCTTCTCGCAGTACCTTGCTCAGGCACTGCCTaGTTGGTGCGGGCATGCACA +
Preference number: 5 (lower is better)
Translates to: FKLAELAEFQLFHLLAVPCSGTA*LVRACT
Trigger: TGTGCATGCCCGCACCAACAAGGCAGTGCCTGAGCA...AGGTACTGCGAGAAGGTGAAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR CAA 90 bp CGAGGTGGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCTTTAAACTGGCTGAGTaGGCAGAGTTTCAGCTGTTT +
Preference number: 5 (lower is better)
Translates to: RGGCVSPSCGQGRVFPHTFKLAE*AEFQLF
Trigger: AAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAA...GGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACCACCTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR CAA 90 bp AGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTTCACGCTTTCCCTATCTTCACGCTTaGCCACAAGTTCCACAGCAG +
Preference number: 5 (lower is better)
Translates to: SPSCGQGRVFPHTLSSRFPYLHA*PQVPQQ
Trigger: CTGCTGTGGAACTTGTGGCAAAGCGTGAAGATAGGG...AAAGCGTGAAGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS TCA 90 bp ATGAACGAGGGCTCCTCTGACACAGCAGCTCCTTCTTCTAGCTCTTaGGCTTGTTTGAACCATGGCAACTTGGCCTCGACTGGAAGTTTC +
Preference number: 5 (lower is better)
Translates to: MNEGSSDTAAPSSSS*ACLNHGNLASTGSF
Trigger: GAAACTTCCAGTCGAGGCCAAGTTGCCATGGTTCAAACAAGCTCAAGAGCTAGAAGAAGGAGCTGCTGTGTCAGAGGAGCCCTCGTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276935.6
ENST00000380548.9
ENST00000680146.1
CDS TCA 90 bp ACTTACGAGGGCTCCTCTGACACAGCAGCTCCTTCTTCTAGCTCTTaGGCTTGTTTGAACCATGGCAACTTGGCCTCGACTGGAAGTTTC +
Preference number: 5 (lower is better)
Translates to: TYEGSSDTAAPSSSS*ACLNHGNLASTGSF
Trigger: GAAACTTCCAGTCGAGGCCAAGTTGCCATGGTTCAAACAAGCTCAAGAGCTAGAAGAAGGAGCTGCTGTGTCAGAGGAGCCCTCGTAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327883.11
ENST00000546040.1
CDS TCA 90 bp TCAGTCAAACACATTCAGGTGAGCCCAGAGGCATTTATAGCTTCTTaGATCCCCCTTCCCTGGGGCTGCTCTACAGGGACATCTTCTACC +
Preference number: 5 (lower is better)
Translates to: SVKHIQVSPEAFIAS*IPLPWGCSTGTSST
Trigger: GGTAGAAGATGTCCCTGTAGAGCAGCCCCAGGGAAGGGGGATTCAAGAAGCTATAAATGCCTCTGGGCTCACCTGAATGTGTTTGACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380545.9
ENST00000388710.8
ENST00000542621.5
CDS TCA 90 bp TGTCATGCTTATATACACCTCTCTGCATACACCCATGCACCCCACTaGAATGCTCAACTCCACCACCAGCTCACAATCCCTGGGGAAGCT +
Preference number: 5 (lower is better)
Translates to: CHAYIHLSAYTHAPH*NAQLHHQLTIPGEA
Trigger: AGCTTCCCCAGGGATTGTGAGCTGGTGGTGGAGTTGAGCATTTCAGTGGGGTGCATGGGTGTATGCAGAGAGGTGTATATAAGCATGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS GCA 90 bp CTTGTCTGTGTTGCACAGCTAGGTGAGGCCCGATGCAAGGCCCATTaGACTGGAAAGCAGAAAAAGGTAACATACCGCACATTAGCCAAG +
Preference number: 5 (lower is better)
Translates to: LVCVAQLGEARCKAH*TGKQKKVTYRTLAK
Trigger: CTTGGCTAATGTGCGGTATGTTACCTTTTTCTGCTTTCCAGTGCAATGGGCCTTGCATCGGGCCTCACCTAGCTGTGCAACACAGACAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS-3UTR CAA 90 bp GAGATGATTACACTTAGTTCAGAACCCATGAAAGCTACAACCAGTGAGACACTGGCAGTGTGCCAGGAGTaGCCCGACGGCAGCATTCCA +
Preference number: 5 (lower is better)
Translates to: EMITLSSEPMKATTSETLAVCQE*PDGSIP
Trigger: TGGAATGCTGCCGTCGGGCAACTCCTGGCACACTGC...CAGTGTCTCACTGGTTGTAGCTTTCATGGGTTCTGAACTAAGTGTAATCATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR CAA 90 bp GTTTGTGATAGTGCGCTTCTAGGAAAGACACAGGAATTTGTCCAATGTTTGCACGCAGTGTGCCAGGAGTaGCCCGACGGCAGCATTCCA +
Preference number: 5 (lower is better)
Translates to: VCDSALLGKTQEFVQCLHAVCQE*PDGSIP
Trigger: TGGAATGCTGCCGTCGGGCAACTCCTGGCACACTGC...GTGCAAACATTGGACAAATTCCTGTGTCTTTCCTAGAAGCGCACTATCACAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CAA 90 bp GTTTGTGATAGTGCGCTTCTAGGAAAGACACAGGAATTTGTCCAATGTTTGCACCCCCGCTTCTCCGCCTaGCTGCCGTTGGAGAAGATC +
Preference number: 5 (lower is better)
Translates to: VCDSALLGKTQEFVQCLHPRFSA*LPLEKI
Trigger: GATCTTCTCCAACGGCAGCAAGGCGGAGAAGCGGGG...GTGCAAACATTGGACAAATTCCTGTGTCTTTCCTAGAAGCGCACTATCACAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CAA 90 bp GGAATTTGTCCAATGTTTGCACCAATAGGCTACAAACCTTCTGGCTCCCTGCTGTGGGTGCACATGTCATaGGACACAGGGGTGGAGATC +
Preference number: 5 (lower is better)
Translates to: GICPMFAPIGYKPSGSLLWVHMS*DTGVEI
Trigger: GATCTCCACCCCTGTGTCCAATGACATGTGCACCCA...CAGCAGGGAGCCAGAAGGTTTGTAGCCTATTGGTGCAAACATTGGACAAATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS TCA 90 bp GCTCCTCTGACACAGCAGCTCCTTCTTCTAGCTCTTGAGCTTGTTTaGACCATGGCAACTTGGCCTCGACTGGAAGTTTCTCTTTGGGTT +
Preference number: 5 (lower is better)
Translates to: APLTQQLLLLALELV*TMATWPRLEVSLWV
Trigger: AACCCAAAGAGAAACTTCCAGTCGAGGCCAAGTTGCCATGGTTCAAACAAGCTCAAGAGCTAGAAGAAGGAGCTGCTGTGTCAGAGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276935.6
ENST00000327883.11
ENST00000380548.9
ENST00000546040.1
ENST00000680146.1
CDS GCA 90 bp CTAATGAACAAAGAAAGAAGGCACAGTTACCGGAGACCACTCCTGTaGCAGCCATTTAGGGCAGTCAAAAATGTTGCAGGGCTGCGCGAT +
Preference number: 5 (lower is better)
Translates to: LMNKERRHSYRRPLL*QPFRAVKNVAGLRD
Trigger: ATCGCGCAGCCCTGCAACATTTTTGACTGCCCTAAATGGCTGGCACAGGAGTGGTCTCCGGTAACTGTGCCTTCTTTCTTTGTTCATTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS CCA 90 bp ACTCTGTGCTCCTTTAGAGTTAACAGCATTTTCTGTTTAGTAGCCTaGCCCCTGAGAGTTGTTGATGAGTCAGACCCTGTGGGCACCAGC +
Preference number: 5 (lower is better)
Translates to: TLCSFRVNSIFCLVA*PLRVVDESDPVGTS
Trigger: GCTGGTGCCCACAGGGTCTGACTCATCAACAACTCTCAGGGGCCAGGCTACTAAACAGAAAATGCTGTTAACTCTAAAGGAGCACAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS-3UTR CAA 90 bp GCTCTATCATCAAAGCAGCTTTTACAGATTCGGGATCATTCATTCAGCCTCAATGCAGTGTGCCAGGAGTaGCCCGACGGCAGCATTCCA +
Preference number: 5 (lower is better)
Translates to: ALSSKQLLQIRDHSFSLNAVCQE*PDGSIP
Trigger: TGGAATGCTGCCGTCGGGCAACTCCTGGCACACTGC...ATTGAGGCTGAATGAATGATCCCGAATCTGTAAAAGCTGCTTTGATGATAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR CAA 90 bp GTTCATTATCGTTTTGGTGGAGGTGTTGTTCCCTGGCTGTTTAGTGGGGCCAGAACCAGGGTTGTTCCTTaGGCTTGGCACTTGAGTGAA +
Preference number: 5 (lower is better)
Translates to: VHYRFGGGVVPWLFSGARTRVVP*AWHLSE
Trigger: TTCACTCAAGTGCCAAGCCAAAGGAACAACCCTGGT...TCTGGCCCCACTAAACAGCCAGGGAACAACACCTCCACCAAAACGATAATGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380570.8
CDS-3UTR CAA 90 bp AAACACTCCTGTGTTTGTGATAGTGCGCTTCTAGGAAAGACACAGGAATTTGTCGGGCACAGGGTGGAATaGACAACCGTTGAGAGGCCG +
Preference number: 5 (lower is better)
Translates to: KHSCVCDSALLGKTQEFVGHRVE*TTVERP
Trigger: CGGCCTCTCAACGGTTGTCAATTCCACCCTGTGCCC...GACAAATTCCTGTGTCTTTCCTAGAAGCGCACTATCACAAACACAGGAGTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CAA 90 bp TGTCCACAGCTCACTAGGTGGGGACACAGATTAATATTGTCTTCCTCTCAAATTCCTGCATCCGAGGGCTaGAGGCGGTGGATCTTGAGA +
Preference number: 5 (lower is better)
Translates to: CPQLTRWGHRLILSSSQIPASEG*RRWILR
Trigger: TCTCAAGATCCACCGCCTCAAGCCCTCGGATGCAGG...AATTTGAGAGGAAGACAATATTAATCTGTGTCCCCACCTAGTGAGCTGTGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CAA 90 bp TTTGAGAAAGGAGCGGGCCAGGCTATGTTACAGTTCAGGAAGGGTATAAAAGGAGCAGCTGAATTCCCCTaGAGACCCACCGCTAAGGTT +
Preference number: 5 (lower is better)
Translates to: FEKGAGQAMLQFRKGIKGAAEFP*RPTAKV
Trigger: AACCTTAGCGGTGGGTCTCAAGGGGAATTCAGCTGC...TCCTTTTATACCCTTCCTGAACTGTAACATAGCCTGGCCCGCTCCTTTCTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380538.4
CDS-3UTR CAA 90 bp TGTCCACAGCTCACTAGGTGGGGACACAGATTAATATTGTCTTCCTCTCAAATTAGGAGGCTGAGCAGGTaGCCAGTCTGTCCACAGACC +
Preference number: 5 (lower is better)
Translates to: CPQLTRWGHRLILSSSQIRRLSR*PVCPQT
Trigger: GGTCTGTGGACAGACTGGCAACCTGCTCAGCCTCCT...AATTTGAGAGGAAGACAATATTAATCTGTGTCCCCACCTAGTGAGCTGTGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CAA 90 bp GGTTGCGTGAGTCCTTCGTGTGGCCAGGGTAGAGTTTTTCCCCACACCCTATCTTTTAAACTGGCTGAGTaGGCAGAGTTTCAGCTGTTT +
Preference number: 5 (lower is better)
Translates to: GCVSPSCGQGRVFPHTLSFKLAE*AEFQLF
Trigger: AAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAA...AGATAGGGTGTGGGGAAAAACTCTACCCTGGCCACACGAAGGACTCACGCAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000388710.8
ENST00000542621.5
CDS-3UTR CAA 90 bp CCTCCTTCCACATTAGCCAGCAGCCTTCATTGTCTTGTGGTGCTGCTGAGTTGCTCATTTTCTGCAATGTaGTGTGCCTTAGAGCCTGCT +
Preference number: 5 (lower is better)
Translates to: PPSTLASSLHCLVVLLSCSFSAM*CALEPA
Trigger: AGCAGGCTCTAAGGCACACAACATTGCAGAAAATGA...GCAACTCAGCAGCACCACAAGACAATGAAGGCTGCTGGCTAATGTGGAAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CAA 90 bp GTTTGTGATAGTGCGCTTCTAGGAAAGACACAGGAATTTGTCCAATGTTTGCACACACGCATAAACCCATaGTCCCACCCCGGTCCCTGG +
Preference number: 5 (lower is better)
Translates to: VCDSALLGKTQEFVQCLHTRINP*SHPGPW
Trigger: CCAGGGACCGGGGTGGGACAATGGGTTTATGCGTGT...GTGCAAACATTGGACAAATTCCTGTGTCTTTCCTAGAAGCGCACTATCACAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CAA 90 bp TTGTGTTTTAGAGGAGAAAGTGCCTCCTTCCACATTAGCCAGCAGCCTTCATTGTGCATGACTTTGACTTaGCTCCAGCCGCCTCACCAC +
Preference number: 5 (lower is better)
Translates to: LCFRGESASFHISQQPSLCMTLT*LQPPHH
Trigger: GTGGTGAGGCGGCTGGAGCAAAGTCAAAGTCATGCA...CAATGAAGGCTGCTGGCTAATGTGGAAGGAGGCACTTTCTCCTCTAAAACACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CAA 90 bp GGGAAGGAGGCAAAAATTACTTGGCCAAAGCTGCTCGGCTTAATGAGGATTTTGTGCATGACTTTGACTTaGCTCCAGCCGCCTCACCAC +
Preference number: 5 (lower is better)
Translates to: GKEAKITWPKLLGLMRILCMTLT*LQPPHH
Trigger: GTGGTGAGGCGGCTGGAGCAAAGTCAAAGTCATGCA...CAAAATCCTCATTAAGCCGAGCAGCTTTGGCCAAGTAATTTTTGCCTCCTTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CAA 90 bp CAGATGCCCAATGTAGATTGCACCTCTAATGGTTCCCCATGTCTGGTAGCATGTGCTTCCCCGTGCTATTaGAGGGAACATTATCTGGGG +
Preference number: 5 (lower is better)
Translates to: QMPNVDCTSNGSPCLVACASPCY*REHYLG
Trigger: CCCCAGATAATGTTCCCTCAAATAGCACGGGGAAGC...ACATGCTACCAGACATGGGGAACCATTAGAGGTGCAATCTACATTGGGCATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS GCA 90 bp GGGCTATTTGCCTACATGGCGTCTGCCTTAGTGTTGGGAATTTATTaGTCAGTGAGGCCCAGTTGGGGAGAAAACTGCACAGCTACATTT +
Preference number: 5 (lower is better)
Translates to: GLFAYMASALVLGIY*SVRPSWGENCTATF
Trigger: AAATGTAGCTGTGCAGTTTTCTCCCCAACTGGGCCTCACTGAGCAATAAATTCCCAACACTAAGGCAGACGCCATGTAGGCAAATAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS-3UTR CAA 90 bp TGGGGAAGAGGAGACAAAGGAGCAAAACACTCCTGTGTTTGTGATAGTGCGCTTCCTTTGGCTTGGCACTaGAGTGAACATGGGTTGTCA +
Preference number: 5 (lower is better)
Translates to: WGRGDKGAKHSCVCDSALPLAWH*SEHGLS
Trigger: TGACAACCCATGTTCACTCAAGTGCCAAGCCAAAGG...AAGCGCACTATCACAAACACAGGAGTGTTTTGCTCCTTTGTCTCCTCTTCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CAA 90 bp ACGAGTCCCAGCAGTTTTAAGCAAGTCCCAGGCACTGACTCCTCGGCACTGCCTATTCTCAGTATCTCTTaGTCTGGAAATTTCTGGAAG +
Preference number: 5 (lower is better)
Translates to: TSPSSFKQVPGTDSSALPILSIS*SGNFWK
Trigger: CTTCCAGAAATTTCCAGACAAAGAGATACTGAGAAT...AGGCAGTGCCGAGGAGTCAGTGCCTGGGACTTGCTTAAAACTGCTGGGACTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CAA 90 bp CTTAGTTCAGAACCCATGAAAGCTACAACCAGTGAGACACTGCTTTCTTTAAACGGGCAGTCAAAAATGTaGCAGGGCTGCGCGATGGGC +
Preference number: 5 (lower is better)
Translates to: LSSEPMKATTSETLLSLNGQSKM*QGCAMG
Trigger: GCCCATCGCGCAGCCCTGCAACATTTTTGACTGCCC...GTTTAAAGAAAGCAGTGTCTCACTGGTTGTAGCTTTCATGGGTTCTGAACTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR CAA 90 bp TTTGACTCTTGGATGAGATTAGGCCATTATACTTTGGTCCCCTTTATTGTTGCACGCTGGGATGCTGGCTaGGGCCCTTCACACTCGTCA +
Preference number: 5 (lower is better)
Translates to: FDSWMRLGHYTLVPFIVARWDAG*GPSHSS
Trigger: TGACGAGTGTGAAGGGCCCAAGCCAGCATCCCAGCG...TGCAACAATAAAGGGGACCAAAGTATAATGGCCTAATCTCATCCAAGAGTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CAA 90 bp GGGAAGGAGGCAAAAATTACTTGGCCAAAGCTGCTCGGCTTAATGAGGATTTTGGCAGGCTTCTCCGTGTaGATCACTGTCATTCGTGAC +
Preference number: 5 (lower is better)
Translates to: GKEAKITWPKLLGLMRILAGFSV*ITVIRD
Trigger: GTCACGAATGACAGTGATCAACACGGAGAAGCCTGC...CAAAATCCTCATTAAGCCGAGCAGCTTTGGCCAAGTAATTTTTGCCTCCTTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CAA 90 bp GTTCCACAGCAGCGAGATTTAAACTGGCTGAGTTGGCAGAGTTTCAGCTGTTTCTGCGGGGAGCCCAGTTaGCTTTTATTCCTGAACCAA +
Preference number: 5 (lower is better)
Translates to: VPQQRDLNWLSWQSFSCFCGEPS*LLFLNQ
Trigger: TTGGTTCAGGAATAAAAGCAAACTGGGCTCCCCGCA...GAAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAATCTCGCTGCTGTGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388710.8
ENST00000542621.5
CDS-3UTR CAA 90 bp CTGCCTCAGCATGGTGTCCCCTCCCCATTTGTCCTAACTGTGACTAAAGGGACATTTAAACTGGCTGAGTaGGCAGAGTTTCAGCTGTTT +
Preference number: 5 (lower is better)
Translates to: LPQHGVPSPFVLTVTKGTFKLAE*AEFQLF
Trigger: AAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAA...TGTCCCTTTAGTCACAGTTAGGACAAATGGGGAGGGGACACCATGCTGAGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CAA 90 bp TGGGGAAGAGGAGACAAAGGAGCAAAACACTCCTGTGTTTGTGATAGTGCGCTTTTTTGCTGCATGACTTaGACTTTGCTCCAGCCGCCT +
Preference number: 5 (lower is better)
Translates to: WGRGDKGAKHSCVCDSALFCCMT*TLLQPP
Trigger: AGGCGGCTGGAGCAAAGTCAAAGTCATGCAGCAAAA...AAGCGCACTATCACAAACACAGGAGTGTTTTGCTCCTTTGTCTCCTCTTCCCCA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CAA 90 bp CCTCAATTACCCTTGAAAGGCAGTTGCTTCCCCGTGCTATTTGAGGGAACATTATTGGTCATGCTGGATTaGGGGCATTCCTACTCCAGG +
Preference number: 5 (lower is better)
Translates to: PQLPLKGSCFPVLFEGTLLVMLD*GHSYSR
Trigger: CCTGGAGTAGGAATGCCCCAAATCCAGCATGACCAA...TAATGTTCCCTCAAATAGCACGGGGAAGCAACTGCCTTTCAAGGGTAATTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR CAA 90 bp AGTTCAGAACCCATGAAAGCTACAACCAGTGAGACACTGCTTTCTTTAAACAAACTTCCTTCACAGCTCTaGCTGCTCAGGCAGCGCCTC +
Preference number: 5 (lower is better)
Translates to: SSEPMKATTSETLLSLNKLPSQL*LLRQRL
Trigger: GAGGCGCTGCCTGAGCAGCAAGAGCTGTGAAGGAAG...TTTGTTTAAAGAAAGCAGTGTCTCACTGGTTGTAGCTTTCATGGGTTCTGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR CAA 90 bp AAGGCAGTTGCTTCCCCGTGCTATTTGAGGGAACATTATCTGGGGAACAATAGACCTTTGGCTTGGCACTaGAGTGAACATGGGTTGTCA +
Preference number: 5 (lower is better)
Translates to: KAVASPCYLREHYLGNNRPLAWH*SEHGLS
Trigger: TGACAACCCATGTTCACTCAAGTGCCAAGCCAAAGG...TCTATTGTTCCCCAGATAATGTTCCCTCAAATAGCACGGGGAAGCAACTGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR CAA 90 bp CCTCAATTACCCTTGAAAGGCAGTTGCTTCCCCGTGCTATTTGAGGGAACATTAGTTCAACAACCAGGGTaGTTCCTTTGGCTTGGCACT +
Preference number: 5 (lower is better)
Translates to: PQLPLKGSCFPVLFEGTLVQQPG*FLWLGT
Trigger: AGTGCCAAGCCAAAGGAACAACCCTGGTTGTTGAAC...TAATGTTCCCTCAAATAGCACGGGGAAGCAACTGCCTTTCAAGGGTAATTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR CAA 90 bp GTCCCACCTAAGCTAATTCACATGCCAGAGCATGAAGCCTTCTACATTTTCAGGGTTCAACAACCAGGGTaGTTCCTTTGGCTTGGCACT +
Preference number: 5 (lower is better)
Translates to: VPPKLIHMPEHEAFYIFRVQQPG*FLWLGT
Trigger: AGTGCCAAGCCAAAGGAACAACCCTGGTTGTTGAAC...CCTGAAAATGTAGAAGGCTTCATGCTCTGGCATGTGAATTAGCTTAGGTGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380570.8
CDS-3UTR CAA 90 bp GAGATGATTACACTTAGTTCAGAACCCATGAAAGCTACAACCAGTGAGACACTGCCACAGTTATCTTCCTaGACGGTGCTTCCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: EMITLSSEPMKATTSETLPQLSS*TVLPSW
Trigger: CCAGCTGGGAAGCACCGTCAAGGAAGATAACTGTGG...CAGTGTCTCACTGGTTGTAGCTTTCATGGGTTCTGAACTAAGTGTAATCATCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR CAA 90 bp GCAAAAATTACTTGGCCAAAGCTGCTCGGCTTAATGAGGATTTTGCCGAAGAGTTCTGTCTCGTCTGGGTaGAACTCAGGAATTTCCCCG +
Preference number: 5 (lower is better)
Translates to: AKITWPKLLGLMRILPKSSVSSG*NSGISP
Trigger: CGGGGAAATTCCTGAGTTCAACCCAGACGAGACAGA...ACTCTTCGGCAAAATCCTCATTAAGCCGAGCAGCTTTGGCCAAGTAATTTTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CAA 90 bp TTTGTCATTTCTGAGGCGGAGGGCACAATGGCTTATTTCATCTTTCTGTTTCCTGGCAGCATTCCATGCTaGGATCCTTGCCGGAATCAG +
Preference number: 5 (lower is better)
Translates to: FVISEAEGTMAYFIFLFPGSIPC*DPCRNQ
Trigger: CTGATTCCGGCAAGGATCCAAGCATGGAATGCTGCC...AGGAAACAGAAAGATGAAATAAGCCATTGTGCCCTCCGCCTCAGAAATGACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR CAA 90 bp GCAAAAATTACTTGGCCAAAGCTGCTCGGCTTAATGAGGATTTTGCCGAAGAGTTGCCAATTTCCCACCTaGCTGGGCAGGGATCCAAAT +
Preference number: 5 (lower is better)
Translates to: AKITWPKLLGLMRILPKSCQFPT*LGRDPN
Trigger: ATTTGGATCCCTGCCCAGCAAGGTGGGAAATTGGCA...ACTCTTCGGCAAAATCCTCATTAAGCCGAGCAGCTTTGGCCAAGTAATTTTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CAA 90 bp GTTTGTGATAGTGCGCTTCTAGGAAAGACACAGGAATTTGTCCAATGTTTGCACAGCCAGCAGCCTTCATaGTCTTGTGGTGCTGCTGAG +
Preference number: 5 (lower is better)
Translates to: VCDSALLGKTQEFVQCLHSQQPS*SCGAAE
Trigger: CTCAGCAGCACCACAAGACAATGAAGGCTGCTGGCT...GTGCAAACATTGGACAAATTCCTGTGTCTTTCCTAGAAGCGCACTATCACAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CAA 90 bp AGGTTCATTATCGTTTTGGTGGAGGTGTTGTTCCCTGGCTGTTTAGTGGGGCCAGTGTCTTACATTTGGTaGCGGAGAGCTGGGATTTAT +
Preference number: 5 (lower is better)
Translates to: RFIIVLVEVLFPGCLVGPVSYIW*RRAGIY
Trigger: ATAAATCCCAGCTCTCCGCAACCAAATGTAAGACAC...TGGCCCCACTAAACAGCCAGGGAACAACACCTCCACCAAAACGATAATGAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380570.8
CDS TCA 90 bp ACTATGTGCGTTGAATATTGGCGCTCTCTGAGCATGGTGAGCCACTaGCACAAACATGGGTTAACACTACCCGAGTACAAAGATCATCCA +
Preference number: 5 (lower is better)
Translates to: TMCVEYWRSLSMVSH*HKHGLTLPEYKDHP
Trigger: TGGATGATCTTTGTACTCGGGTAGTGTTAACCCATGTTTGTGTCAGTGGCTCACCATGCTCAGAGAGCGCCAATATTCAACGCACATAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS GCA 90 bp CCCAGGCACTTGGGCCTACTTTCTCTGTTAAGCTTTATTTTCATGTaGCCTCCAGTCTCTCTTCCTTCTACCCATCATGCCTTAAACACA +
Preference number: 5 (lower is better)
Translates to: PRHLGLLSLLSFIFM*PPVSLPSTHHALNT
Trigger: TGTGTTTAAGGCATGATGGGTAGAAGGAAGAGAGACTGGAGGGCACATGAAAATAAAGCTTAACAGAGAAAGTAGGCCCAAGTGCCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS-3UTR CAA 90 bp ATTGAGTTTATCTGGAGCAAATGCGACAACATTAAGCTCAACAACTGTTCTTGTCTTCCTTCACAGCTCTaGCTGCTCAGGCAGCGCCTC +
Preference number: 5 (lower is better)
Translates to: IEFIWSKCDNIKLNNCSCLPSQL*LLRQRL
Trigger: GAGGCGCTGCCTGAGCAGCAAGAGCTGTGAAGGAAG...ACAAGAACAGTTGTTGAGCTTAATGTTGTCGCATTTGCTCCAGATAAACTCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CAA 90 bp GTGACACTCAAGGAAAGAAAAATAACTCTAGTCTACTTTTCCTTCGCACAATACCTTCCTTCACAGCTCTaGCTGCTCAGGCAGCGCCTC +
Preference number: 5 (lower is better)
Translates to: VTLKERKITLVYFSFAQYLPSQL*LLRQRL
Trigger: GAGGCGCTGCCTGAGCAGCAAGAGCTGTGAAGGAAG...GTATTGTGCGAAGGAAAAGTAGACTAGAGTTATTTTTCTTTCCTTGAGTGTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431052.6
CDS-3UTR CAA 90 bp ATAAAGAATCATGGGACATGTGAGCAAGTCATGGGATCTCAGATCATCAGGTACTGTGGGGCTTTGTTTTaGGGCTACAGCCTCCTGTGT +
Preference number: 5 (lower is better)
Translates to: IKNHGTCEQVMGSQIIRYCGALF*GYSLLC
Trigger: ACACAGGAGGCTGTAGCCCAAAAACAAAGCCCCACA...GTACCTGATGATCTGAGATCCCATGACTTGCTCACATGTCCCATGATTCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CAA 90 bp TTTGACTCTTGGATGAGATTAGGCCATTATACTTTGGTCCCCTTTATTGTTGCACAGGACTCGGAGCACTaGGTGAACCCCTCATACTCC +
Preference number: 5 (lower is better)
Translates to: FDSWMRLGHYTLVPFIVAQDSEH*VNPSYS
Trigger: GGAGTATGAGGGGTTCACCAAGTGCTCCGAGTCCTG...TGCAACAATAAAGGGGACCAAAGTATAATGGCCTAATCTCATCCAAGAGTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CAA 90 bp AGCTTTGGTGAGATGATTACACTTAGTTCAGAACCCATGAAAGCTACAACCAGTGGCAGCATTCCATGCTaGGATCCTTGCCGGAATCAG +
Preference number: 5 (lower is better)
Translates to: SFGEMITLSSEPMKATTSGSIPC*DPCRNQ
Trigger: CTGATTCCGGCAAGGATCCAAGCATGGAATGCTGCC...ACTGGTTGTAGCTTTCATGGGTTCTGAACTAAGTGTAATCATCTCACCAAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR CAA 90 bp AAACACTCCTGTGTTTGTGATAGTGCGCTTCTAGGAAAGACACAGGAATTTGTCCCTGCAACCTGGCAGTaGATTGTCACATTCACTCCC +
Preference number: 5 (lower is better)
Translates to: KHSCVCDSALLGKTQEFVPATWQ*IVTFTP
Trigger: GGGAGTGAATGTGACAATCAACTGCCAGGTTGCAGG...GACAAATTCCTGTGTCTTTCCTAGAAGCGCACTATCACAAACACAGGAGTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CAA 90 bp ACTGAAAGAGAAAACACGCGGACGTCCTTATGCTTGAAGGTGGAGGTGGAGGAGGAAAGACACAGGAATTaGTCCAATGTTTGCACCAAT +
Preference number: 5 (lower is better)
Translates to: TERENTRTSLCLKVEVEEERHRN*SNVCTN
Trigger: ATTGGTGCAAACATTGGACAAATTCCTGTGTCTTTC...CTCCTCCACCTCCACCTTCAAGCATAAGGACGTCCGCGTGTTTTCTCTTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CAA 90 bp CAGCAGCGAGATTTAAACTGGCTGAGTTGGCAGAGTTTCAGCTGTTTCACCTTCTCATTTTCTGCAATGTaGTGTGCCTTAGAGCCTGCT +
Preference number: 5 (lower is better)
Translates to: QQRDLNWLSWQSFSCFTFSFSAM*CALEPA
Trigger: AGCAGGCTCTAAGGCACACAACATTGCAGAAAATGA...GAAGGTGAAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAATCTCGCTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542621.5
CDS-3UTR CAA 90 bp GCAAAAATTACTTGGCCAAAGCTGCTCGGCTTAATGAGGATTTTGCCGAAGAGTTTTTGCTGCATGACTTaGACTTTGCTCCAGCCGCCT +
Preference number: 5 (lower is better)
Translates to: AKITWPKLLGLMRILPKSFCCMT*TLLQPP
Trigger: AGGCGGCTGGAGCAAAGTCAAAGTCATGCAGCAAAA...ACTCTTCGGCAAAATCCTCATTAAGCCGAGCAGCTTTGGCCAAGTAATTTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000380548.9
ENST00000542621.5
CDS-3UTR CAA 90 bp CTTGTCCCACCTAAGCTAATTCACATGCCAGAGCATGAAGCCTTCTACATTTTCGTTTTGGTGGAGGTGTaGTTCCCTGGCTGTTTAGTG +
Preference number: 5 (lower is better)
Translates to: LVPPKLIHMPEHEAFYIFVLVEV*FPGCLV
Trigger: CACTAAACAGCCAGGGAACAACACCTCCACCAAAAC...GAAAATGTAGAAGGCTTCATGCTCTGGCATGTGAATTAGCTTAGGTGGGACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380570.8
CDS GCA 90 bp ACAAAGATCATCCATCCCCCAGCGTGTAAAAAGAAGTGGGCTATTTaGCTACATGGCGTCTGCCTTAGTGTTGGGAATTTATTGCTCAGT +
Preference number: 5 (lower is better)
Translates to: TKIIHPPACKKKWAI*LHGVCLSVGNLLLS
Trigger: ACTGAGCAATAAATTCCCAACACTAAGGCAGACGCCATGTAGGCAAATAGCCCACTTCTTTTTACACGCTGGGGGATGGATGATCTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS-3UTR CAA 90 bp TCAACAACTGTTCTTGTCTGTGAGTCAACAAAAGGGTCACAGGATAACCTAACCACCAGGGTTGTTCCTTaGGCTTGGCACTTGAGTGAA +
Preference number: 5 (lower is better)
Translates to: STTVLVCESTKGSQDNLTTRVVP*AWHLSE
Trigger: TTCACTCAAGTGCCAAGCCAAAGGAACAACCCTGGT...GGTTAGGTTATCCTGTGACCCTTTTGTTGACTCACAGACAAGAACAGTTGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CAA 90 bp AAACACTCCTGTGTTTGTGATAGTGCGCTTCTAGGAAAGACACAGGAATTTGTCACCAGGGTTGTTCCTTaGGCTTGGCACTTGAGTGAA +
Preference number: 5 (lower is better)
Translates to: KHSCVCDSALLGKTQEFVTRVVP*AWHLSE
Trigger: TTCACTCAAGTGCCAAGCCAAAGGAACAACCCTGGT...GACAAATTCCTGTGTCTTTCCTAGAAGCGCACTATCACAAACACAGGAGTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CAA 90 bp TTGTCATTTCTGAGGCGGAGGGCACAATGGCTTATTTCATCTTTCTGTTTCCTTACCAGGGTTGTTCCTTaGGCTTGGCACTTGAGTGAA +
Preference number: 5 (lower is better)
Translates to: LSFLRRRAQWLISSFCFLTRVVP*AWHLSE
Trigger: TTCACTCAAGTGCCAAGCCAAAGGAACAACCCTGGT...AAGGAAACAGAAAGATGAAATAAGCCATTGTGCCCTCCGCCTCAGAAATGACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR CAA 90 bp GCATTTGGGTGTTGTTACAACACAGGAATGTGGTTAGAAAGACCCTTTTGCATGACAGTATCATCCGATTaGGTTGCGGAGAGCTGGGAT +
Preference number: 5 (lower is better)
Translates to: AFGCCYNTGMWLERPFCMTVSSD*VAESWD
Trigger: ATCCCAGCTCTCCGCAACCAAATCGGATGATACTGT...CATGCAAAAGGGTCTTTCTAACCACATTCCTGTGTTGTAACAACACCCAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CAA 90 bp AAGGCAGTTGCTTCCCCGTGCTATTTGAGGGAACATTATCTGGGGAACAATAGAGTAATAGTGACAGTATaGGTCAGCAACCACACGGTT +
Preference number: 5 (lower is better)
Translates to: KAVASPCYLREHYLGNNRVIVTV*VSNHTV
Trigger: AACCGTGTGGTTGCTGACCAATACTGTCACTATTAC...TCTATTGTTCCCCAGATAATGTTCCCTCAAATAGCACGGGGAAGCAACTGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR CAA 90 bp TGTTGTTACAACACAGGAATGTGGTTAGAAAGACCCTTTTGCATGTTTTTCAAAGGGCAGTCAAAAATGTaGCAGGGCTGCGCGATGGGC +
Preference number: 5 (lower is better)
Translates to: CCYNTGMWLERPFCMFFKGQSKM*QGCAMG
Trigger: GCCCATCGCGCAGCCCTGCAACATTTTTGACTGCCC...TTTGAAAAACATGCAAAAGGGTCTTTCTAACCACATTCCTGTGTTGTAACAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CAA 90 bp ATAAAGAATCATGGGACATGTGAGCAAGTCATGGGATCTCAGATCATCAGGTACAGTCGATACTGCTTCTaGCTGGGCAGGGATCCAAAT +
Preference number: 5 (lower is better)
Translates to: IKNHGTCEQVMGSQIIRYSRYCF*LGRDPN
Trigger: ATTTGGATCCCTGCCCAGCAAGAAGCAGTATCGACT...GTACCTGATGATCTGAGATCCCATGACTTGCTCACATGTCCCATGATTCTTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CAA 90 bp TTTGGTGAGATGATTACACTTAGTTCAGAACCCATGAAAGCTACAACCAGTGAGTCCATGCTTGGATCCTaGCCGGAATCAGAATCGGAC +
Preference number: 5 (lower is better)
Translates to: FGEMITLSSEPMKATTSESMLGS*PESESD
Trigger: GTCCGATTCTGATTCCGGCAAGGATCCAAGCATGGA...CTCACTGGTTGTAGCTTTCATGGGTTCTGAACTAAGTGTAATCATCTCACCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR CAA 90 bp GTCCCACCTAAGCTAATTCACATGCCAGAGCATGAAGCCTTCTACATTTTCAGGAGGTTCATTATCGTTTaGGTGGAGGTGTTGTTCCCT +
Preference number: 5 (lower is better)
Translates to: VPPKLIHMPEHEAFYIFRRFIIV*VEVLFP
Trigger: AGGGAACAACACCTCCACCAAAACGATAATGAACCT...CCTGAAAATGTAGAAGGCTTCATGCTCTGGCATGTGAATTAGCTTAGGTGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380570.8
CDS-3UTR CAA 90 bp GATCTCAGATCATCAGGTACAACCAGTTCACTTTGCAGATGTGGAAACATAAAGCCTTTGGCTTGGCACTaGAGTGAACATGGGTTGTCA +
Preference number: 5 (lower is better)
Translates to: DLRSSGTTSSLCRCGNIKPLAWH*SEHGLS
Trigger: TGACAACCCATGTTCACTCAAGTGCCAAGCCAAAGG...CTTTATGTTTCCACATCTGCAAAGTGAACTGGTTGTACCTGATGATCTGAGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CAA 90 bp ATGATTACACTTAGTTCAGAACCCATGAAAGCTACAACCAGTGAGACACTGCTTCCTTTGGCTTGGCACTaGAGTGAACATGGGTTGTCA +
Preference number: 5 (lower is better)
Translates to: MITLSSEPMKATTSETLLPLAWH*SEHGLS
Trigger: TGACAACCCATGTTCACTCAAGTGCCAAGCCAAAGG...AAGCAGTGTCTCACTGGTTGTAGCTTTCATGGGTTCTGAACTAAGTGTAATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR CAA 90 bp ATGATTACACTTAGTTCAGAACCCATGAAAGCTACAACCAGTGAGACACTGCTTACAGTATCATCCGATTaGGTTGCGGAGAGCTGGGAT +
Preference number: 5 (lower is better)
Translates to: MITLSSEPMKATTSETLLTVSSD*VAESWD
Trigger: ATCCCAGCTCTCCGCAACCAAATCGGATGATACTGT...AAGCAGTGTCTCACTGGTTGTAGCTTTCATGGGTTCTGAACTAAGTGTAATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR CAA 90 bp ATAAAGAATCATGGGACATGTGAGCAAGTCATGGGATCTCAGATCATCAGGTACTCGGTGGATGATGGGTaGATAGAAGATGAACTGGAC +
Preference number: 5 (lower is better)
Translates to: IKNHGTCEQVMGSQIIRYSVDDG*IEDELD
Trigger: GTCCAGTTCATCTTCTATCAACCCATCATCCACCGA...GTACCTGATGATCTGAGATCCCATGACTTGCTCACATGTCCCATGATTCTTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CAA 90 bp GAGATGATTACACTTAGTTCAGAACCCATGAAAGCTACAACCAGTGAGACACTGAACCTCCTCCACAGGTaGCTGAGCAAGGAAAGAAAT +
Preference number: 5 (lower is better)
Translates to: EMITLSSEPMKATTSETLNLLHR*LSKERN
Trigger: ATTTCTTTCCTTGCTCAGCAACCTGTGGAGGAGGTT...CAGTGTCTCACTGGTTGTAGCTTTCATGGGTTCTGAACTAAGTGTAATCATCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR CAA 90 bp TCAGAACCCATGAAAGCTACAACCAGTGAGACACTGCTTTCTTTAAACAAAACATGTGGGGCTTTGTTTTaGGGCTACAGCCTCCTGTGT +
Preference number: 5 (lower is better)
Translates to: SEPMKATTSETLLSLNKTCGALF*GYSLLC
Trigger: ACACAGGAGGCTGTAGCCCAAAAACAAAGCCCCACA...TGTTTTGTTTAAAGAAAGCAGTGTCTCACTGGTTGTAGCTTTCATGGGTTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR CAA 90 bp GATCTCAGATCATCAGGTACAACCAGTTCACTTTGCAGATGTGGAAACATAAAGTTGAACCATGGCAACTaGGCCTCGACTGGAAGTTTC +
Preference number: 5 (lower is better)
Translates to: DLRSSGTTSSLCRCGNIKLNHGN*ASTGSF
Trigger: GAAACTTCCAGTCGAGGCCAAGTTGCCATGGTTCAA...CTTTATGTTTCCACATCTGCAAAGTGAACTGGTTGTACCTGATGATCTGAGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CAA 90 bp CTTAGTTCAGAACCCATGAAAGCTACAACCAGTGAGACACTGCTTTCTTTAAACTTGAACCATGGCAACTaGGCCTCGACTGGAAGTTTC +
Preference number: 5 (lower is better)
Translates to: LSSEPMKATTSETLLSLNLNHGN*ASTGSF
Trigger: GAAACTTCCAGTCGAGGCCAAGTTGCCATGGTTCAA...GTTTAAAGAAAGCAGTGTCTCACTGGTTGTAGCTTTCATGGGTTCTGAACTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR CAA 90 bp TTAAACTGGCTGAGTTGGCAGAGTTTCAGCTGTTTCACCTTCTCGCAGTACCTGGAAAGACACAGGAATTaGTCCAATGTTTGCACCAAT +
Preference number: 5 (lower is better)
Translates to: LNWLSWQSFSCFTFSQYLERHRN*SNVCTN
Trigger: ATTGGTGCAAACATTGGACAAATTCCTGTGTCTTTC...CAGGTACTGCGAGAAGGTGAAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542621.5
CDS TCA 90 bp AAAATAAACTCCTTCCCAACTGGAATACAAATGATGGTATTGGGATaGCGAGGAAGGAGTGAAGTGAGTATCAAATTCCAAGGCTGGGGG +
Preference number: 5 (lower is better)
Translates to: KINSFPTGIQMMVLG*RGRSEVSIKFQGWG
Trigger: CCCCCAGCCTTGGAATTTGATACTCACTTCACTCCTTCCTCGTCATCCCAATACCATCATTTGTATTCCAGTTGGGAAGGAGTTTATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS-3UTR CAA 90 bp AAAAGCTTTGGTGAGATGATTACACTTAGTTCAGAACCCATGAAAGCTACAACCACCAGGGTTGTTCCTTaGGCTTGGCACTTGAGTGAA +
Preference number: 5 (lower is better)
Translates to: KSFGEMITLSSEPMKATTTRVVP*AWHLSE
Trigger: TTCACTCAAGTGCCAAGCCAAAGGAACAACCCTGGT...GGTTGTAGCTTTCATGGGTTCTGAACTAAGTGTAATCATCTCACCAAAGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR CAA 90 bp AAAAGCTTTGGTGAGATGATTACACTTAGTTCAGAACCCATGAAAGCTACAACCGTTCAACAACCAGGGTaGTTCCTTTGGCTTGGCACT +
Preference number: 5 (lower is better)
Translates to: KSFGEMITLSSEPMKATTVQQPG*FLWLGT
Trigger: AGTGCCAAGCCAAAGGAACAACCCTGGTTGTTGAAC...GGTTGTAGCTTTCATGGGTTCTGAACTAAGTGTAATCATCTCACCAAAGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR CAA 90 bp TGTTGTTACAACACAGGAATGTGGTTAGAAAGACCCTTTTGCATGTTTTTCAAACCACAGTTATCTTCCTaGACGGTGCTTCCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: CCYNTGMWLERPFCMFFKPQLSS*TVLPSW
Trigger: CCAGCTGGGAAGCACCGTCAAGGAAGATAACTGTGG...TTTGAAAAACATGCAAAAGGGTCTTTCTAACCACATTCCTGTGTTGTAACAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CAA 90 bp GCATTTGGGTGTTGTTACAACACAGGAATGTGGTTAGAAAGACCCTTTTGCATGTATCATCCGATTTGGTaGCGGAGAGCTGGGATTTAT +
Preference number: 5 (lower is better)
Translates to: AFGCCYNTGMWLERPFCMYHPIW*RRAGIY
Trigger: ATAAATCCCAGCTCTCCGCAACCAAATCGGATGATA...CATGCAAAAGGGTCTTTCTAACCACATTCCTGTGTTGTAACAACACCCAAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CAA 90 bp GGAATTTGTCCAATGTTTGCACCAATAGGCTACAAACCTTCTGGCTCCCTGCTGATTCTCAGTATCTCTTaGTCTGGAAATTTCTGGAAG +
Preference number: 5 (lower is better)
Translates to: GICPMFAPIGYKPSGSLLILSIS*SGNFWK
Trigger: CTTCCAGAAATTTCCAGACAAAGAGATACTGAGAAT...CAGCAGGGAGCCAGAAGGTTTGTAGCCTATTGGTGCAAACATTGGACAAATTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380548.9
CDS-3UTR CAA 90 bp CTTAGTTCAGAACCCATGAAAGCTACAACCAGTGAGACACTGCTTTCTTTAAACTCGGTGGATGATGGGTaGATAGAAGATGAACTGGAC +
Preference number: 5 (lower is better)
Translates to: LSSEPMKATTSETLLSLNSVDDG*IEDELD
Trigger: GTCCAGTTCATCTTCTATCAACCCATCATCCACCGA...GTTTAAAGAAAGCAGTGTCTCACTGGTTGTAGCTTTCATGGGTTCTGAACTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR CAA 90 bp TGTTGTTACAACACAGGAATGTGGTTAGAAAGACCCTTTTGCATGTTTTTCAAAGGCTCCCGAGTCTGTTaGTTCAAGCAGCTCACCACA +
Preference number: 5 (lower is better)
Translates to: CCYNTGMWLERPFCMFFKGSRVC*FKQLTT
Trigger: TGTGGTGAGCTGCTTGAACAAACAGACTCGGGAGCC...TTTGAAAAACATGCAAAAGGGTCTTTCTAACCACATTCCTGTGTTGTAACAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CAA 90 bp TCAACAACTGTTCTTGTCTGTGAGTCAACAAAAGGGTCACAGGATAACCTAACCCTCAGCATTTGGGTGTaGTTACAACACAGGAATGTG +
Preference number: 5 (lower is better)
Translates to: STTVLVCESTKGSQDNLTLSIWV*LQHRNV
Trigger: CACATTCCTGTGTTGTAACAACACCCAAATGCTGAG...GGTTAGGTTATCCTGTGACCCTTTTGTTGACTCACAGACAAGAACAGTTGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CAA 90 bp CTATTCGTTTTGGTGCTCAAAGAAGGGTTTAGGGACCACGAGTCCCAGCAGTTTTATTTTCTGTATACATaGAACACCAGGAGAAGGGAA +
Preference number: 5 (lower is better)
Translates to: LFVLVLKEGFRDHESQQFYFLYT*NTRRRE
Trigger: TTCCCTTCTCCTGGTGTTCAATGTATACAGAAAATA...AAACTGCTGGGACTCGTGGTCCCTAAACCCTTCTTTGAGCACCAAAACGAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CAA 90 bp GTGACACTCAAGGAAAGAAAAATAACTCTAGTCTACTTTTCCTTCGCACAATACTCCATGCTTGGATCCTaGCCGGAATCAGAATCGGAC +
Preference number: 5 (lower is better)
Translates to: VTLKERKITLVYFSFAQYSMLGS*PESESD
Trigger: GTCCGATTCTGATTCCGGCAAGGATCCAAGCATGGA...GTATTGTGCGAAGGAAAAGTAGACTAGAGTTATTTTTCTTTCCTTGAGTGTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431052.6
CDS-3UTR CAA 90 bp AGTGACACTCAAGGAAAGAAAAATAACTCTAGTCTACTTTTCCTTCGCACAATAGGCAGCATTCCATGCTaGGATCCTTGCCGGAATCAG +
Preference number: 5 (lower is better)
Translates to: SDTQGKKNNSSLLFLRTIGSIPC*DPCRNQ
Trigger: CTGATTCCGGCAAGGATCCAAGCATGGAATGCTGCC...TATTGTGCGAAGGAAAAGTAGACTAGAGTTATTTTTCTTTCCTTGAGTGTCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431052.6
CDS-3UTR CAA 90 bp TTCATTCAGCCTCAATTACCCTTGAAAGGCAGTTGCTTCCCCGTGCTATTTGAGAAACATCATTTACTTTaGGTCATGCTGGATTTGGGG +
Preference number: 5 (lower is better)
Translates to: FIQPQLPLKGSCFPVLFEKHHLL*VMLDLG
Trigger: CCCCAAATCCAGCATGACCAAAAGTAAATGATGTTT...CTCAAATAGCACGGGGAAGCAACTGCCTTTCAAGGGTAATTGAGGCTGAATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR CAA 90 bp GCTCTATCATCAAAGCAGCTTTTACAGATTCGGGATCATTCATTCAGCCTCAATTCAGTGAAGAGTCTTTaGTCATTTCTGAGGCGGAGG +
Preference number: 5 (lower is better)
Translates to: ALSSKQLLQIRDHSFSLNSVKSL*SFLRRR
Trigger: CCTCCGCCTCAGAAATGACAAAAGACTCTTCACTGA...ATTGAGGCTGAATGAATGATCCCGAATCTGTAAAAGCTGCTTTGATGATAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR CAA 90 bp GTCTACTTTTCCTTCGCACAATACAACACTTGGTACTTTTCACTGAAATCATACCCTTTGGCTTGGCACTaGAGTGAACATGGGTTGTCA +
Preference number: 5 (lower is better)
Translates to: VYFSFAQYNTWYFSLKSYPLAWH*SEHGLS
Trigger: TGACAACCCATGTTCACTCAAGTGCCAAGCCAAAGG...GTATGATTTCAGTGAAAAGTACCAAGTGTTGTATTGTGCGAAGGAAAAGTAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431052.6
CDS-3UTR CAA 90 bp ATTGAGTTTATCTGGAGCAAATGCGACAACATTAAGCTCAACAACTGTTCTTGTGTTCAACAACCAGGGTaGTTCCTTTGGCTTGGCACT +
Preference number: 5 (lower is better)
Translates to: IEFIWSKCDNIKLNNCSCVQQPG*FLWLGT
Trigger: AGTGCCAAGCCAAAGGAACAACCCTGGTTGTTGAAC...ACAAGAACAGTTGTTGAGCTTAATGTTGTCGCATTTGCTCCAGATAAACTCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CAA 90 bp GAGCCAAAAAGCTTTGGTGAGATGATTACACTTAGTTCAGAACCCATGAAAGCTTACTTCCATAGGGAATaGCAACCACAGTATCATCCG +
Preference number: 5 (lower is better)
Translates to: EPKSFGEMITLSSEPMKAYFHRE*QPQYHP
Trigger: CGGATGATACTGTGGTTGCAATTCCCTATGGAAGTA...AGCTTTCATGGGTTCTGAACTAAGTGTAATCATCTCACCAAAGCTTTTTGGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR CAA 90 bp GCTCTATCATCAAAGCAGCTTTTACAGATTCGGGATCATTCATTCAGCCTCAATCCCGAGTTACGAATCTaGACAATGAAATCTGCTGTG +
Preference number: 5 (lower is better)
Translates to: ALSSKQLLQIRDHSFSLNPELRI*TMKSAV
Trigger: CACAGCAGATTTCATTGTCAAGATTCGTAACTCGGG...ATTGAGGCTGAATGAATGATCCCGAATCTGTAAAAGCTGCTTTGATGATAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR CAA 90 bp TCAACAACTGTTCTTGTCTGTGAGTCAACAAAAGGGTCACAGGATAACCTAACCCATGTCCTATTCGTTTaGGTGCTCAAAGAAGGGTTT +
Preference number: 5 (lower is better)
Translates to: STTVLVCESTKGSQDNLTHVLFV*VLKEGF
Trigger: AAACCCTTCTTTGAGCACCAAAACGAATAGGACATG...GGTTAGGTTATCCTGTGACCCTTTTGTTGACTCACAGACAAGAACAGTTGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CAA 90 bp TCAACAACTGTTCTTGTCTGTGAGTCAACAAAAGGGTCACAGGATAACCTAACCCTTTGGTCCCCTTTATaGTTGCAATTAGCAACCTTC +
Preference number: 5 (lower is better)
Translates to: STTVLVCESTKGSQDNLTLWSPL*LQLATF
Trigger: GAAGGTTGCTAATTGCAACAATAAAGGGGACCAAAG...GGTTAGGTTATCCTGTGACCCTTTTGTTGACTCACAGACAAGAACAGTTGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CAA 90 bp TACTTTTCCTTCGCACAATACAACACTTGGTACTTTTCACTGAAATCATACCTTACCAGGGTTGTTCCTTaGGCTTGGCACTTGAGTGAA +
Preference number: 5 (lower is better)
Translates to: YFSFAQYNTWYFSLKSYLTRVVP*AWHLSE
Trigger: TTCACTCAAGTGCCAAGCCAAAGGAACAACCCTGGT...AAGGTATGATTTCAGTGAAAAGTACCAAGTGTTGTATTGTGCGAAGGAAAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431052.6
CDS-3UTR CAA 90 bp AGTGACACTCAAGGAAAGAAAAATAACTCTAGTCTACTTTTCCTTCGCACAATAGTTCAACAACCAGGGTaGTTCCTTTGGCTTGGCACT +
Preference number: 5 (lower is better)
Translates to: SDTQGKKNNSSLLFLRTIVQQPG*FLWLGT
Trigger: AGTGCCAAGCCAAAGGAACAACCCTGGTTGTTGAAC...TATTGTGCGAAGGAAAAGTAGACTAGAGTTATTTTTCTTTCCTTGAGTGTCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431052.6
CDS-3UTR CAA 90 bp AGTTCAGAACCCATGAAAGCTACAACCAGTGAGACACTGCTTTCTTTAAACAAATATCATCCGATTTGGTaGCGGAGAGCTGGGATTTAT +
Preference number: 5 (lower is better)
Translates to: SSEPMKATTSETLLSLNKYHPIW*RRAGIY
Trigger: ATAAATCCCAGCTCTCCGCAACCAAATCGGATGATA...TTTGTTTAAAGAAAGCAGTGTCTCACTGGTTGTAGCTTTCATGGGTTCTGAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR CAA 90 bp AGTTCAGAACCCATGAAAGCTACAACCAGTGAGACACTGCTTTCTTTAAACAAACCCGAGTTACGAATCTaGACAATGAAATCTGCTGTG +
Preference number: 5 (lower is better)
Translates to: SSEPMKATTSETLLSLNKPELRI*TMKSAV
Trigger: CACAGCAGATTTCATTGTCAAGATTCGTAACTCGGG...TTTGTTTAAAGAAAGCAGTGTCTCACTGGTTGTAGCTTTCATGGGTTCTGAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR CAA 90 bp ATTGAGTTTATCTGGAGCAAATGCGACAACATTAAGCTCAACAACTGTTCTTGTAACCTCCTCCACAGGTaGCTGAGCAAGGAAAGAAAT +
Preference number: 5 (lower is better)
Translates to: IEFIWSKCDNIKLNNCSCNLLHR*LSKERN
Trigger: ATTTCTTTCCTTGCTCAGCAACCTGTGGAGGAGGTT...ACAAGAACAGTTGTTGAGCTTAATGTTGTCGCATTTGCTCCAGATAAACTCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CAA 90 bp CAGAGTGAGATATTCCACAGGAAAGGCACCTCTATACAATTATCATTTTTAGGGGTAATAGTGACAGTATaGGTCAGCAACCACACGGTT +
Preference number: 5 (lower is better)
Translates to: QSEIFHRKGTSIQLSFLGVIVTV*VSNHTV
Trigger: AACCGTGTGGTTGCTGACCAATACTGTCACTATTAC...CCCTAAAAATGATAATTGTATAGAGGTGCCTTTCCTGTGGAATATCTCACTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CAA 90 bp TCAGAACCCATGAAAGCTACAACCAGTGAGACACTGCTTTCTTTAAACAAAACAGTAATAGTGACAGTATaGGTCAGCAACCACACGGTT +
Preference number: 5 (lower is better)
Translates to: SEPMKATTSETLLSLNKTVIVTV*VSNHTV
Trigger: AACCGTGTGGTTGCTGACCAATACTGTCACTATTAC...TGTTTTGTTTAAAGAAAGCAGTGTCTCACTGGTTGTAGCTTTCATGGGTTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR CAA 90 bp GATCTCAGATCATCAGGTACAACCAGTTCACTTTGCAGATGTGGAAACATAAAGGCTCAACAACTGTTCTaGTCTGTGAGTCAACAAAAG +
Preference number: 5 (lower is better)
Translates to: DLRSSGTTSSLCRCGNIKAQQLF*SVSQQK
Trigger: CTTTTGTTGACTCACAGACAAGAACAGTTGTTGAGC...CTTTATGTTTCCACATCTGCAAAGTGAACTGGTTGTACCTGATGATCTGAGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CAA 90 bp ATAAAGAATCATGGGACATGTGAGCAAGTCATGGGATCTCAGATCATCAGGTACTTAGGCCATTATACTTaGGTCCCCTTTATTGTTGCA +
Preference number: 5 (lower is better)
Translates to: IKNHGTCEQVMGSQIIRYLGHYT*VPFIVA
Trigger: TGCAACAATAAAGGGGACCAAAGTATAATGGCCTAA...GTACCTGATGATCTGAGATCCCATGACTTGCTCACATGTCCCATGATTCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CAA 90 bp GAGATGATTACACTTAGTTCAGAACCCATGAAAGCTACAACCAGTGAGACACTGATTCTCAGTATCTCTTaGTCTGGAAATTTCTGGAAG +
Preference number: 5 (lower is better)
Translates to: EMITLSSEPMKATTSETLILSIS*SGNFWK
Trigger: CTTCCAGAAATTTCCAGACAAAGAGATACTGAGAAT...CAGTGTCTCACTGGTTGTAGCTTTCATGGGTTCTGAACTAAGTGTAATCATCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327883.11
CDS-3UTR CAA 90 bp TTTGTCATTTCTGAGGCGGAGGGCACAATGGCTTATTTCATCTTTCTGTTTCCTATTCTCAGTATCTCTTaGTCTGGAAATTTCTGGAAG +
Preference number: 5 (lower is better)
Translates to: FVISEAEGTMAYFIFLFPILSIS*SGNFWK
Trigger: CTTCCAGAAATTTCCAGACAAAGAGATACTGAGAAT...AGGAAACAGAAAGATGAAATAAGCCATTGTGCCCTCCGCCTCAGAAATGACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS-3UTR CAA 90 bp TGTTGTTACAACACAGGAATGTGGTTAGAAAGACCCTTTTGCATGTTTTTCAAATACTTCCATAGGGAATaGCAACCACAGTATCATCCG +
Preference number: 5 (lower is better)
Translates to: CCYNTGMWLERPFCMFFKYFHRE*QPQYHP
Trigger: CGGATGATACTGTGGTTGCAATTCCCTATGGAAGTA...TTTGAAAAACATGCAAAAGGGTCTTTCTAACCACATTCCTGTGTTGTAACAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CAA 90 bp TGTTGTTACAACACAGGAATGTGGTTAGAAAGACCCTTTTGCATGTTTTTCAAACCCGAGTTACGAATCTaGACAATGAAATCTGCTGTG +
Preference number: 5 (lower is better)
Translates to: CCYNTGMWLERPFCMFFKPELRI*TMKSAV
Trigger: CACAGCAGATTTCATTGTCAAGATTCGTAACTCGGG...TTTGAAAAACATGCAAAAGGGTCTTTCTAACCACATTCCTGTGTTGTAACAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CAA 90 bp ATTGAGTTTATCTGGAGCAAATGCGACAACATTAAGCTCAACAACTGTTCTTGTTGGTCCCCTTTATTGTaGCAATTAGCAACCTTCTAC +
Preference number: 5 (lower is better)
Translates to: IEFIWSKCDNIKLNNCSCWSPLL*QLATFY
Trigger: GTAGAAGGTTGCTAATTGCAACAATAAAGGGGACCA...ACAAGAACAGTTGTTGAGCTTAATGTTGTCGCATTTGCTCCAGATAAACTCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS-3UTR CAA 90 bp TACTTTTCCTTCGCACAATACAACACTTGGTACTTTTCACTGAAATCATACCTTAACCCTCTGGACAAGTaGAATGAGAACAAATCAGCA +
Preference number: 5 (lower is better)
Translates to: YFSFAQYNTWYFSLKSYLNPLDK*NENKSA
Trigger: TGCTGATTTGTTCTCATTCAACTTGTCCAGAGGGTT...AAGGTATGATTTCAGTGAAAAGTACCAAGTGTTGTATTGTGCGAAGGAAAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431052.6
CDS-3UTR CAA 90 bp AACTCTAGTCTACTTTTCCTTCGCACAATACAACACTTGGTACTTTTCACTGAAATTTACACAAAGACATaGAAACCCTCTGGACAAGTT +
Preference number: 5 (lower is better)
Translates to: NSSLLFLRTIQHLVLFTEIYTKT*KPSGQV
Trigger: AACTTGTCCAGAGGGTTTCAATGTCTTTGTGTAAAT...TTCAGTGAAAAGTACCAAGTGTTGTATTGTGCGAAGGAAAAGTAGACTAGAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431052.6
CDS GCA 72 bp AGGCGAGACCCCTCCCTCGAAGAGGTGGCCGCCTCCTaGGCTGATTGCGGTGGCTCCGCGGCGGCGGCCGGC +
Preference number: 6 (lower is better)
Translates to: RRDPSLEEVAAS*ADCGGSAAAAG
Trigger: GCCGGCCGCCGCCGCGGAGCCACCGCAATCAGCGCAGGAGGCGGCCACCTCTTCGAGGGAGGGGTCTCGCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680146.1
CDS GCA 72 bp CAGGCGGGCTCGGGCGTGCGCCCCACGAGACAGAGCTaGGCTGGGGCAGGCGGCGCGGCTTTGGAGCTTCAG +
Preference number: 6 (lower is better)
Translates to: QAGSGVRPTRQS*AGAGGAALELQ
Trigger: CTGAAGCTCCAAAGCCGCGCCGCCTGCCCCAGCGCAGCTCTGTCTCGTGGGGCGCACGCCCGAGCCCGCCTG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680146.1
CDS CCA 72 bp GGGCTCGGGCGTGCGCCCCACGAGACAGAGCTGCGCTaGGGCAGGCGGCGCGGCTTTGGAGCTTCAGTGCGG +
Preference number: 6 (lower is better)
Translates to: GLGRAPHETELR*GRRRGFGASVR
Trigger: CCGCACTGAAGCTCCAAAGCCGCGCCGCCTGCCCCAGCGCAGCTCTGTCTCGTGGGGCGCACGCCCGAGCCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680146.1
CDS CCA 72 bp GTGCCACCGAGGAGGCGGGCCAGGAACCCGGGGCACTaGGGCGCCTCCAGTCGTGCCATGGTCCCCATGGCG +
Preference number: 6 (lower is better)
Translates to: VPPRRRARNPGH*GASSRAMVPMA
Trigger: CGCCATGGGGACCATGGCACGACTGGAGGCGCCCCAGTGCCCCGGGTTCCTGGCCCGCCTCCTCGGTGGCAC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680146.1
CDS TCA 72 bp TCCCGCTGGCCAGGGCCACCGTCTGCCCCAGGTGGGTaGCCACCTCCGAGGCTGAGAGCTGCTGGGCCGCTG +
Preference number: 6 (lower is better)
Translates to: SRWPGPPSAPGG*PPPRLRAAGPL
Trigger: CAGCGGCCCAGCAGCTCTCAGCCTCGGAGGTGGTCACCCACCTGGGGCAGACGGTGGCCCTGGCCAGCGGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS GCA 72 bp CGGCTTTGGAGCTTCAGTGCGGCCGCGGAGCGGGTCTaGTTTGAATGGGAGCGCGTGCGCTGGGGGTGGGGG +
Preference number: 6 (lower is better)
Translates to: RLWSFSAAAERV*FEWERVRWGWG
Trigger: CCCCCACCCCCAGCGCACGCGCTCCCATTCAAAGCAGACCCGCTCCGCGGCCGCACTGAAGCTCCAAAGCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680146.1
CDS CCA 72 bp CCTTCCTGGCGGCCGCGATGTGCGGGCTGTGCTTCGTaGATGGCCGCCCGGGCCTTGCACAGGTTGCCAGCA +
Preference number: 6 (lower is better)
Translates to: PSWRPRCAGCAS*MAARALHRLPA
Trigger: TGCTGGCAACCTGTGCAAGGCCCGGGCGGCCATCCACGAAGCACAGCCCGCACATCGCGGCCGCCAGGAAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CCA 72 bp CGAGACAGAGCTGCGCTGGGGCAGGCGGCGCGGCTTTaGAGCTTCAGTGCGGCCGCGGAGCGGGTCTGCTTT +
Preference number: 6 (lower is better)
Translates to: RDRAALGQAARL*SFSAAAERVCF
Trigger: AAAGCAGACCCGCTCCGCGGCCGCACTGAAGCTCCAAAGCCGCGCCGCCTGCCCCAGCGCAGCTCTGTCTCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680146.1
CDS CCA 72 bp AGGGGAGTCTCAGGCGAGACCCCTCCCTCGAAGAGGTaGCCGCCTCCTGCGCTGATTGCGGTGGCTCCGCGG +
Preference number: 6 (lower is better)
Translates to: RGVSGETPPSKR*PPPALIAVAPR
Trigger: CCGCGGAGCCACCGCAATCAGCGCAGGAGGCGGCCACCTCTTCGAGGGAGGGGTCTCGCCTGAGACTCCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680146.1
CDS CAA 72 bp ACGAGACAGAGCTGCGCTGGGGCAGGCGGCGCGGCTTaGGAGCTTCAGTGCGGCCGCGGAGCGGGTCTGCTT +
Preference number: 6 (lower is better)
Translates to: TRQSCAGAGGAA*ELQCGRGAGLL
Trigger: AAGCAGACCCGCTCCGCGGCCGCACTGAAGCTCCAAAGCCGCGCCGCCTGCCCCAGCGCAGCTCTGTCTCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680146.1
CDS CAA 90 bp GAGCTGATGAGGTGCTGGCCGTCCTTCTCCCAGGTGATGAGGGGCTaGCGGACCCTGCGCGCCGGGCAGCGCAGCACCACCGCCGTCTTG +
Preference number: 6 (lower is better)
Translates to: ELMRCWPSFSQVMRG*RTLRAGQRSTTAVL
Trigger: CAAGACGGCGGTGGTGCTGCGCTGCCCGGCGCGCAGGGTCCGCAAGCCCCTCATCACCTGGGAGAAGGACGGCCAGCACCTCATCAGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CAA 90 bp GCTGAGAGCTGCTGGGCCGCTGAGATCTTGCGCAGGATGGTGGGCTaGCGGTGTGGCCTTCGAGAGCCTCCCCCGGCGTCCCCGGTGGAG +
Preference number: 6 (lower is better)
Translates to: AESCWAAEILRRMVG*RCGLREPPPASPVE
Trigger: CTCCACCGGGGACGCCGGGGGAGGCTCTCGAAGGCCACACCGCAAGCCCACCATCCTGCGCAAGATCTCAGCGGCCCAGCAGCTCTCAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CCA 72 bp CCTGGCGGCCGCGATGTGCGGGCTGTGCTTCGTGGATaGCCGCCCGGGCCTTGCACAGGTTGCCAGCATACA +
Preference number: 6 (lower is better)
Translates to: PGGRDVRAVLRG*PPGPCTGCQHT
Trigger: TGTATGCTGGCAACCTGTGCAAGGCCCGGGCGGCCATCCACGAAGCACAGCCCGCACATCGCGGCCGCCAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CAA 72 bp TGCTGGGCCGCTGAGATCTTGCGCAGGATGGTGGGCTaGCGGTGTGGCCTTCGAGAGCCTCCCCCGGCGTCC +
Preference number: 6 (lower is better)
Translates to: CWAAEILRRMVG*RCGLREPPPAS
Trigger: GGACGCCGGGGGAGGCTCTCGAAGGCCACACCGCAAGCCCACCATCCTGCGCAAGATCTCAGCGGCCCAGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CAA 90 bp CTCCCCGGGTTGGCGGCCAGGCCCCGCTTCTCCGCCTTGCTGCCGTaGGAGAAGATCCCGTTCTGGTGTTTGTGGGTCTGCAGGGCCTCC +
Preference number: 6 (lower is better)
Translates to: LPGLAARPRFSALLP*EKIPFWCLWVCRAS
Trigger: GGAGGCCCTGCAGACCCACAAACACCAGAACGGGATCTTCTCCAACGGCAGCAAGGCGGAGAAGCGGGGCCTGGCCGCCAACCCGGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS TCA 72 bp CCGCAGGGCGAACCTTCCCTGCGCAGTGGGCAGGGTTaGCCTCCGTGCTGTTCAGCAGGCACCTCAAGCGGG +
Preference number: 6 (lower is better)
Translates to: PQGEPSLRSGQG*PPCCSAGTSSG
Trigger: CCCGCTTGAGGTGCCTGCTGAACAGCACGGAGGTCAACCCTGCCCACTGCGCAGGGAAGGTTCGCCCTGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380538.4
ENST00000380545.9
ENST00000380548.9
ENST00000380559.7
ENST00000542621.5
ENST00000680146.1
CDS TCA 72 bp TTGGAGCTTCAGTGCGGCCGCGGAGCGGGTCTGCTTTaGATGGGAGCGCGTGCGCTGGGGGTGGGGGCGTTA +
Preference number: 6 (lower is better)
Translates to: LELQCGRGAGLL*MGARALGVGAL
Trigger: TAACGCCCCCACCCCCAGCGCACGCGCTCCCATTCAAAGCAGACCCGCTCCGCGGCCGCACTGAAGCTCCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000680146.1
CDS GCA 72 bp AGGCGCCGCTGCTCGGTCACCATGGTGAAGGGCAGGTaGAGGAGCACTTGCTCTGCACCCGGGTCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: RRRCSVTMVKGR*RSTCSAPGSSS
Trigger: GGAGGAGGACCCGGGTGCAGAGCAAGTGCTCCTGCACCTGCCCTTCACCATGGTGACCGAGCAGCGGCGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS GCA 72 bp GTCCTGCGCTCCGAGGGCTTCAGGAGCGTGTCCTGGTaGTCCAGGTGGCTGCGGAAGATCTCCTGGGCCAGC +
Preference number: 6 (lower is better)
Translates to: VLRSEGFRSVSW*SRWLRKISWAS
Trigger: GCTGGCCCAGGAGATCTTCCGCAGCCACCTGGAGCACCAGGACACGCTCCTGAAGCCCTCGGAGCGCAGGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS GCA 72 bp TGCCCCAGGTGGGTGACCACCTCCGAGGCTGAGAGCTaGTGGGCCGCTGAGATCTTGCGCAGGATGGTGGGC +
Preference number: 6 (lower is better)
Translates to: CPRWVTTSEAES*WAAEILRRMVG
Trigger: GCCCACCATCCTGCGCAAGATCTCAGCGGCCCAGCAGCTCTCAGCCTCGGAGGTGGTCACCCACCTGGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS GCA 72 bp AGAACACTCAGTGTCCCGCTGGCCAGGGCCACCGTCTaGCCCAGGTGGGTGACCACCTCCGAGGCTGAGAGC +
Preference number: 6 (lower is better)
Translates to: RTLSVPLARATV*PRWVTTSEAES
Trigger: GCTCTCAGCCTCGGAGGTGGTCACCCACCTGGGGCAGACGGTGGCCCTGGCCAGCGGGACACTGAGTGTTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS GCA 72 bp GCACGCGATGGGCTGCACCGCAGGGCGAACCTTCCCTaGGCAGTGGGCAGGGTTGACCTCCGTGCTGTTCAG +
Preference number: 6 (lower is better)
Translates to: ARDGLHRRANLP*AVGRVDLRAVQ
Trigger: CTGAACAGCACGGAGGTCAACCCTGCCCACTGCGCAGGGAAGGTTCGCCCTGCGGTGCAGCCCATCGCGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380538.4
ENST00000380545.9
ENST00000380548.9
ENST00000380559.7
ENST00000542621.5
ENST00000680146.1
CDS GCA 72 bp CGAGAAGGGCAGTCTCTCCGGTTGCACGCGATGGGCTaGACCGCAGGGCGAACCTTCCCTGCGCAGTGGGCA +
Preference number: 6 (lower is better)
Translates to: REGQSLRLHAMG*TAGRTFPAQWA
Trigger: TGCCCACTGCGCAGGGAAGGTTCGCCCTGCGGTGCAGCCCATCGCGTGCAACCGGAGAGACTGCCCTTCTCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380538.4
ENST00000380545.9
ENST00000380548.9
ENST00000380559.7
ENST00000542621.5
ENST00000680146.1
CDS CCA 72 bp GGGGCCACCGTGACGTGCGTCGAGCTGATGAGGTGCTaGCCGTCCTTCTCCCAGGTGATGAGGGGCTTGCGG +
Preference number: 6 (lower is better)
Translates to: GATVTCVELMRC*PSFSQVMRGLR
Trigger: CCGCAAGCCCCTCATCACCTGGGAGAAGGACGGCCAGCACCTCATCAGCTCGACGCACGTCACGGTGGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CCA 72 bp TCCGAGGGCTTCAGGAGCGTGTCCTGGTGCTCCAGGTaGCTGCGGAAGATCTCCTGGGCCAGCTGGGCCACC +
Preference number: 6 (lower is better)
Translates to: SEGFRSVSWCSR*LRKISWASWAT
Trigger: GGTGGCCCAGCTGGCCCAGGAGATCTTCCGCAGCCACCTGGAGCACCAGGACACGCTCCTGAAGCCCTCGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CCA 72 bp AGAGCTGCTGGGCCGCTGAGATCTTGCGCAGGATGGTaGGCTTGCGGTGTGGCCTTCGAGAGCCTCCCCCGG +
Preference number: 6 (lower is better)
Translates to: RAAGPLRSCAGW*ACGVAFESLPR
Trigger: CCGGGGGAGGCTCTCGAAGGCCACACCGCAAGCCCACCATCCTGCGCAAGATCTCAGCGGCCCAGCAGCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CAA 90 bp GCGCCGCTGCTCGGTCACCATGGTGAAGGGCAGGTGCAGGAGCACTaGCTCTGCACCCGGGTCCTCCTCCGAGGTCGTGTTCCTTTCCGC +
Preference number: 6 (lower is better)
Translates to: APLLGHHGEGQVQEH*LCTRVLLRGRVPFR
Trigger: GCGGAAAGGAACACGACCTCGGAGGAGGACCCGGGTGCAGAGCAAGTGCTCCTGCACCTGCCCTTCACCATGGTGACCGAGCAGCGGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CAA 90 bp CGGCGCGGCTTTGGAGCTTCAGTGCGGCCGCGGAGCGGGTCTGCTTaGAATGGGAGCGCGTGCGCTGGGGGTGGGGGCGTTATTTGTGAA +
Preference number: 6 (lower is better)
Translates to: RRGFGASVRPRSGSA*NGSACAGGGGVICE
Trigger: TTCACAAATAACGCCCCCACCCCCAGCGCACGCGCTCCCATTCAAAGCAGACCCGCTCCGCGGCCGCACTGAAGCTCCAAAGCCGCGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000680146.1
CDS TCA 72 bp GCCCGGGCCTTGCACAGGTTGCCAGCATACAGGGCCTaGTGGAGGAAGAGAAAGGCAGGGGCGGGCACAGGG +
Preference number: 6 (lower is better)
Translates to: ARALHRLPAYRA*WRKRKAGAGTG
Trigger: CCCTGTGCCCGCCCCTGCCTTTCTCTTCCTCCATCAGGCCCTGTATGCTGGCAACCTGTGCAAGGCCCGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS TCA 72 bp GGATGTCGTCCAGGCGCCGCTGCTCGGTCACCATGGTaGAGGGCAGGTGCAGGAGCACTTGCTCTGCACCCG +
Preference number: 6 (lower is better)
Translates to: GCRPGAAARSPW*RAGAGALALHP
Trigger: CGGGTGCAGAGCAAGTGCTCCTGCACCTGCCCTTCACCATGGTGACCGAGCAGCGGCGCCTGGACGACATCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS GCA 72 bp TGGGAGAGGTTCCCCAGGATGTCGTCCAGGCGCCGCTaGTCGGTCACCATGGTGAAGGGCAGGTGCAGGAGC +
Preference number: 6 (lower is better)
Translates to: WERFPRMSSRRR*SVTMVKGRCRS
Trigger: GCTCCTGCACCTGCCCTTCACCATGGTGACCGAGCAGCGGCGCCTGGACGACATCCTGGGGAACCTCTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS GCA 72 bp CCTCCGAGGCTGAGAGCTGCTGGGCCGCTGAGATCTTaGGCAGGATGGTGGGCTTGCGGTGTGGCCTTCGAG +
Preference number: 6 (lower is better)
Translates to: PPRLRAAGPLRS*AGWWACGVAFE
Trigger: CTCGAAGGCCACACCGCAAGCCCACCATCCTGCGCAAGATCTCAGCGGCCCAGCAGCTCTCAGCCTCGGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CCA 72 bp CTGAGAGCTGCTGGGCCGCTGAGATCTTGCGCAGGATaGTGGGCTTGCGGTGTGGCCTTCGAGAGCCTCCCC +
Preference number: 6 (lower is better)
Translates to: LRAAGPLRSCAG*WACGVAFESLP
Trigger: GGGGAGGCTCTCGAAGGCCACACCGCAAGCCCACCATCCTGCGCAAGATCTCAGCGGCCCAGCAGCTCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CCA 72 bp CCCAGGTGGGTGACCACCTCCGAGGCTGAGAGCTGCTaGGCCGCTGAGATCTTGCGCAGGATGGTGGGCTTG +
Preference number: 6 (lower is better)
Translates to: PRWVTTSEAESC*AAEILRRMVGL
Trigger: CAAGCCCACCATCCTGCGCAAGATCTCAGCGGCCCAGCAGCTCTCAGCCTCGGAGGTGGTCACCCACCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CCA 72 bp ATGGGCTGCACCGCAGGGCGAACCTTCCCTGCGCAGTaGGCAGGGTTGACCTCCGTGCTGTTCAGCAGGCAC +
Preference number: 6 (lower is better)
Translates to: MGCTAGRTFPAQ*AGLTSVLFSRH
Trigger: GTGCCTGCTGAACAGCACGGAGGTCAACCCTGCCCACTGCGCAGGGAAGGTTCGCCCTGCGGTGCAGCCCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380538.4
ENST00000380545.9
ENST00000380548.9
ENST00000380559.7
ENST00000542621.5
ENST00000680146.1
CDS CCA 72 bp TCCACCGAGAAGGGCAGTCTCTCCGGTTGCACGCGATaGGCTGCACCGCAGGGCGAACCTTCCCTGCGCAGT +
Preference number: 6 (lower is better)
Translates to: STEKGSLSGCTR*AAPQGEPSLRS
Trigger: ACTGCGCAGGGAAGGTTCGCCCTGCGGTGCAGCCCATCGCGTGCAACCGGAGAGACTGCCCTTCTCGGTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CCA 72 bp CCCCAGCTGGAGAAGGCCCACTCCACACACAGCTGCTaGTTACAGGCCTGGGTGTCCACAGGCCGCTTGGCG +
Preference number: 6 (lower is better)
Translates to: PQLEKAHSTHSC*LQAWVSTGRLA
Trigger: CGCCAAGCGGCCTGTGGACACCCAGGCCTGTAACCAGCAGCTGTGTGTGGAGTGGGCCTTCTCCAGCTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CCA 72 bp CTCAGCGAGAAGGGCAGTCTCTCCGGTTGCACGCGATaGGCTGCACCGCAGGGCGAACCTTCCCTGCGCAGT +
Preference number: 6 (lower is better)
Translates to: LSEKGSLSGCTR*AAPQGEPSLRS
Trigger: ACTGCGCAGGGAAGGTTCGCCCTGCGGTGCAGCCCATCGCGTGCAACCGGAGAGACTGCCCTTCTCGCTGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380538.4
CDS CCA 72 bp AGCTTCAGTGCGGCCGCGGAGCGGGTCTGCTTTGAATaGGAGCGCGTGCGCTGGGGGTGGGGGCGTTATTTG +
Preference number: 6 (lower is better)
Translates to: SFSAAAERVCFE*ERVRWGWGRYL
Trigger: CAAATAACGCCCCCACCCCCAGCGCACGCGCTCCCATTCAAAGCAGACCCGCTCCGCGGCCGCACTGAAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000680146.1
CDS CAA 72 bp ACCGCAGGGCGAACCTTCCCTGCGCAGTGGGCAGGGTaGACCTCCGTGCTGTTCAGCAGGCACCTCAAGCGG +
Preference number: 6 (lower is better)
Translates to: TAGRTFPAQWAG*TSVLFSRHLKR
Trigger: CCGCTTGAGGTGCCTGCTGAACAGCACGGAGGTCAACCCTGCCCACTGCGCAGGGAAGGTTCGCCCTGCGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380538.4
ENST00000380545.9
ENST00000380548.9
ENST00000380559.7
ENST00000542621.5
ENST00000680146.1
CDS CAA 90 bp CGCTTCTCCGCCTTGCTGCCGTTGGAGAAGATCCCGTTCTGGTGTTaGTGGGTCTGCAGGGCCTCCTTCGGGCCGCCCTTCCTCCCCGCA +
Preference number: 6 (lower is better)
Translates to: RFSALLPLEKIPFWC*WVCRASFGPPFLPA
Trigger: TGCGGGGAGGAAGGGCGGCCCGAAGGAGGCCCTGCAGACCCACAAACACCAGAACGGGATCTTCTCCAACGGCAGCAAGGCGGAGAAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS GCA 72 bp AAGGGGGCCACCGTGACGTGCGTCGAGCTGATGAGGTaGTGGCCGTCCTTCTCCCAGGTGATGAGGGGCTTG +
Preference number: 6 (lower is better)
Translates to: KGATVTCVELMR*WPSFSQVMRGL
Trigger: CAAGCCCCTCATCACCTGGGAGAAGGACGGCCAGCACCTCATCAGCTCGACGCACGTCACGGTGGCCCCCTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS GCA 72 bp CCGTTGGAGAAGATCCCGTTCTGGTGTTTGTGGGTCTaGAGGGCCTCCTTCGGGCCGCCCTTCCTCCCCGCA +
Preference number: 6 (lower is better)
Translates to: PLEKIPFWCLWV*RASFGPPFLPA
Trigger: TGCGGGGAGGAAGGGCGGCCCGAAGGAGGCCCTGCAGACCCACAAACACCAGAACGGGATCTTCTCCAACGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS GCA 72 bp TCCCCGGGTTGGCGGCCAGGCCCCGCTTCTCCGCCTTaGTGCCGTTGGAGAAGATCCCGTTCTGGTGTTTGT +
Preference number: 6 (lower is better)
Translates to: SPGWRPGPASPP*CRWRRSRSGVC
Trigger: ACAAACACCAGAACGGGATCTTCTCCAACGGCAGCAAGGCGGAGAAGCGGGGCCTGGCCGCCAACCCGGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS GCA 72 bp AGGTCACCATCCACCGAGAAGGGCAGTCTCTCCGGTTaGACGCGATGGGCTGCACCGCAGGGCGAACCTTCC +
Preference number: 6 (lower is better)
Translates to: RSPSTEKGSLSG*TRWAAPQGEPS
Trigger: GGAAGGTTCGCCCTGCGGTGCAGCCCATCGCGTGCAACCGGAGAGACTGCCCTTCTCGGTGGATGGTGACCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS GCA 72 bp CAAGGCCCATTGCACGAGAAGGGCAGTCTCTCCGGTTaGACGCGATGGGCTGCACCGCAGGGCGAACCTTCC +
Preference number: 6 (lower is better)
Translates to: QGPLHEKGSLSG*TRWAAPQGEPS
Trigger: GGAAGGTTCGCCCTGCGGTGCAGCCCATCGCGTGCAACCGGAGAGACTGCCCTTCTCGTGCAATGGGCCTTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542621.5
CDS GCA 72 bp CGGCCGCGGAGCGGGTCTGCTTTGAATGGGAGCGCGTaGGCTGGGGGTGGGGGCGTTATTTGTGAATGTGCT +
Preference number: 6 (lower is better)
Translates to: RPRSGSALNGSA*AGGGGVICECA
Trigger: AGCACATTCACAAATAACGCCCCCACCCCCAGCGCACGCGCTCCCATTCAAAGCAGACCCGCTCCGCGGCCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000680146.1
CDS CCA 72 bp AAGGCCCACTCCACACACAGCTGCTGGTTACAGGCCTaGGTGTCCACAGGCCGCTTGGCGACCTGGGTGCAC +
Preference number: 6 (lower is better)
Translates to: KAHSTHSCWLQA*VSTGRLATWVH
Trigger: GTGCACCCAGGTCGCCAAGCGGCCTGTGGACACCCAGGCCTGTAACCAGCAGCTGTGTGTGGAGTGGGCCTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CCA 72 bp TTGCACGAGAAGGGCAGTCTCTCCGGTTGCACGCGATaGGCTGCACCGCAGGGCGAACCTTCCCTGCGCAGT +
Preference number: 6 (lower is better)
Translates to: LHEKGSLSGCTR*AAPQGEPSLRS
Trigger: ACTGCGCAGGGAAGGTTCGCCCTGCGGTGCAGCCCATCGCGTGCAACCGGAGAGACTGCCCTTCTCGTGCAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542621.5
CDS CAA 72 bp ACCTCCGAGGCTGAGAGCTGCTGGGCCGCTGAGATCTaGCGCAGGATGGTGGGCTTGCGGTGTGGCCTTCGA +
Preference number: 6 (lower is better)
Translates to: TSEAESCWAAEI*RRMVGLRCGLR
Trigger: TCGAAGGCCACACCGCAAGCCCACCATCCTGCGCAAGATCTCAGCGGCCCAGCAGCTCTCAGCCTCGGAGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CAA 72 bp GAGGTCACCATCCACCGAGAAGGGCAGTCTCTCCGGTaGCACGCGATGGGCTGCACCGCAGGGCGAACCTTC +
Preference number: 6 (lower is better)
Translates to: EVTIHREGQSLR*HAMGCTAGRTF
Trigger: GAAGGTTCGCCCTGCGGTGCAGCCCATCGCGTGCAACCGGAGAGACTGCCCTTCTCGGTGGATGGTGACCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CAA 72 bp GCAAGGCCCATTGCACGAGAAGGGCAGTCTCTCCGGTaGCACGCGATGGGCTGCACCGCAGGGCGAACCTTC +
Preference number: 6 (lower is better)
Translates to: ARPIAREGQSLR*HAMGCTAGRTF
Trigger: GAAGGTTCGCCCTGCGGTGCAGCCCATCGCGTGCAACCGGAGAGACTGCCCTTCTCGTGCAATGGGCCTTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542621.5
CDS CAA 90 bp TCTTCCTCACTTCTCGGGCTCAAGGGCCGGGCCACGAGCTTGCGGTaGCCTCCGATGAGCTTAATCACAAAGTGCTCCCGGGCCGGGCCC +
Preference number: 6 (lower is better)
Translates to: SSSLLGLKGRATSLR*PPMSLITKCSRAGP
Trigger: GGGCCCGGCCCGGGAGCACTTTGTGATTAAGCTCATCGGAGGCAACCGCAAGCTCGTGGCCCGGCCCTTGAGCCCGAGAAGTGAGGAAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS TCA 72 bp GAGCTTAATCACAAAGTGCTCCCGGGCCGGGCCCGCTaGGCAGGTGTAGACGCCTGCATCCGAGGGCTTGAG +
Preference number: 6 (lower is better)
Translates to: ELNHKVLPGRAR*AGVDACIRGLE
Trigger: CTCAAGCCCTCGGATGCAGGCGTCTACACCTGCTCAGCGGGCCCGGCCCGGGAGCACTTTGTGATTAAGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS GCA 72 bp TCGGTCACCATGGTGAAGGGCAGGTGCAGGAGCACTTaGTCTGCACCCGGGTCCTCCTCCGAGGTCGTGTTC +
Preference number: 6 (lower is better)
Translates to: SVTMVKGRCRST*SAPGSSSEVVF
Trigger: GAACACGACCTCGGAGGAGGACCCGGGTGCAGAGCAAGTGCTCCTGCACCTGCCCTTCACCATGGTGACCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS GCA 72 bp CTGATGGTAGGCCTTGGGTGGCCGATGGCCTCACAGTaGAGAAGAACACTCAGTGTCCCGCTGGCCAGGGCC +
Preference number: 6 (lower is better)
Translates to: LMVGLGWPMASQ*RRTLSVPLARA
Trigger: GGCCCTGGCCAGCGGGACACTGAGTGTTCTTCTGCACTGTGAGGCCATCGGCCACCCAAGGCCTACCATCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS GCA 72 bp AGGCCTGGGTGTCCACAGGCCGCTTGGCGACCTGGGTaGACATGTCATTGGACACAGGGGTGGAGATCCCAG +
Preference number: 6 (lower is better)
Translates to: RPGCPQAAWRPG*TCHWTQGWRSQ
Trigger: CTGGGATCTCCACCCCTGTGTCCAATGACATGTGCACCCAGGTCGCCAAGCGGCCTGTGGACACCCAGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CCA 72 bp GCTGCTGGTTACAGGCCTGGGTGTCCACAGGCCGCTTaGCGACCTGGGTGCACATGTCATTGGACACAGGGG +
Preference number: 6 (lower is better)
Translates to: AAGYRPGCPQAA*RPGCTCHWTQG
Trigger: CCCCTGTGTCCAATGACATGTGCACCCAGGTCGCCAAGCGGCCTGTGGACACCCAGGCCTGTAACCAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CAA 72 bp GCCTTGCTGCCGTTGGAGAAGATCCCGTTCTGGTGTTaGTGGGTCTGCAGGGCCTCCTTCGGGCCGCCCTTC +
Preference number: 6 (lower is better)
Translates to: ALLPLEKIPFWC*WVCRASFGPPF
Trigger: GAAGGGCGGCCCGAAGGAGGCCCTGCAGACCCACAAACACCAGAACGGGATCTTCTCCAACGGCAGCAAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CAA 72 bp CTCGGTCACCATGGTGAAGGGCAGGTGCAGGAGCACTaGCTCTGCACCCGGGTCCTCCTCCGAGGTCGTGTT +
Preference number: 6 (lower is better)
Translates to: LGHHGEGQVQEH*LCTRVLLRGRV
Trigger: AACACGACCTCGGAGGAGGACCCGGGTGCAGAGCAAGTGCTCCTGCACCTGCCCTTCACCATGGTGACCGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CAA 90 bp CCTTGGCCACCGCTCTCCAGCCTAACTTTGACAGAGCTCAGCCACTaGCTCCCCAAGGCTGCCAACAGCAGGGGTGGCACCAGCCTGCAG +
Preference number: 6 (lower is better)
Translates to: PWPPLSSLTLTELSH*LPKAANSRGGTSLQ
Trigger: CTGCAGGCTGGTGCCACCCCTGCTGTTGGCAGCCTTGGGGAGCAAGTGGCTGAGCTCTGTCAAAGTTAGGCTGGAGAGCGGTGGCCAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS CAA 90 bp AGCACCTCTTCCTCACTTCTCGGGCTCAAGGGCCGGGCCACGAGCTaGCGGTTGCCTCCGATGAGCTTAATCACAAAGTGCTCCCGGGCC +
Preference number: 6 (lower is better)
Translates to: STSSSLLGLKGRATS*RLPPMSLITKCSRA
Trigger: GGCCCGGGAGCACTTTGTGATTAAGCTCATCGGAGGCAACCGCAAGCTCGTGGCCCGGCCCTTGAGCCCGAGAAGTGAGGAAGAGGTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS GCA 72 bp CCCGCTGCATGGGCCTGCATAACAGGCACGCTGGGATaGTGGCTTGGGCCCTTCACACTCGTCAATAGGCAG +
Preference number: 6 (lower is better)
Translates to: PAAWACITGTLG*WLGPFTLVNRQ
Trigger: CTGCCTATTGACGAGTGTGAAGGGCCCAAGCCAGCATCCCAGCGTGCCTGTTATGCAGGCCCATGCAGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276935.6
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS GCA 72 bp TGCCAATTTCCCACCTTGCTGGGCAGGGATCCAAATTaGAGGACTTCAGGAGCTGTGGGGGCCGGCGGCTGG +
Preference number: 6 (lower is better)
Translates to: CQFPTLLGRDPN*RTSGAVGAGGW
Trigger: CCAGCCGCCGGCCCCCACAGCTCCTGAAGTCCTGCAATTTGGATCCCTGCCCAGCAAGGTGGGAAATTGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS GCA 72 bp CACCATGGTGAAGGGCAGGTGCAGGAGCACTTGCTCTaGACCCGGGTCCTCCTCCGAGGTCGTGTTCCTTTC +
Preference number: 6 (lower is better)
Translates to: HHGEGQVQEHLL*TRVLLRGRVPF
Trigger: GAAAGGAACACGACCTCGGAGGAGGACCCGGGTGCAGAGCAAGTGCTCCTGCACCTGCCCTTCACCATGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS GCA 72 bp ACCACCAGCTCACAATCCCTGGGGAAGCTGACCCCATaGCCTATGCTCAGGGTCGGTCCCAGGGACTGCTCT +
Preference number: 6 (lower is better)
Translates to: TTSSQSLGKLTP*PMLRVGPRDCS
Trigger: AGAGCAGTCCCTGGGACCGACCCTGAGCATAGGGCATGGGGTCAGCTTCCCCAGGGATTGTGAGCTGGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS CCA 72 bp GCTTCCTCTGCCTGCGAGTCTGTATGTAGACCTTCCTaGCGGCCGCGATGTGCGGGCTGTGCTTCGTGGATG +
Preference number: 6 (lower is better)
Translates to: ASSACESVCRPS*RPRCAGCASWM
Trigger: CATCCACGAAGCACAGCCCGCACATCGCGGCCGCCAGGAAGGTCTACATACAGACTCGCAGGCAGAGGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CCA 72 bp TTGCTGCCGTTGGAGAAGATCCCGTTCTGGTGTTTGTaGGTCTGCAGGGCCTCCTTCGGGCCGCCCTTCCTC +
Preference number: 6 (lower is better)
Translates to: LLPLEKIPFWCL*VCRASFGPPFL
Trigger: GAGGAAGGGCGGCCCGAAGGAGGCCCTGCAGACCCACAAACACCAGAACGGGATCTTCTCCAACGGCAGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CCA 72 bp TTCTCCGCCTTGCTGCCGTTGGAGAAGATCCCGTTCTaGTGTTTGTGGGTCTGCAGGGCCTCCTTCGGGCCG +
Preference number: 6 (lower is better)
Translates to: FSALLPLEKIPF*CLWVCRASFGP
Trigger: CGGCCCGAAGGAGGCCCTGCAGACCCACAAACACCAGAACGGGATCTTCTCCAACGGCAGCAAGGCGGAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CCA 72 bp GCAGCTGGGTGCTCTCAGTCAGCTCTCCATGAAGATTaGCCGCCCTGCAGGAGTACAGGCCCTGATCCGAGG +
Preference number: 6 (lower is better)
Translates to: AAGCSQSALHED*PPCRSTGPDPR
Trigger: CCTCGGATCAGGGCCTGTACTCCTGCAGGGCGGCCAATCTTCATGGAGAGCTGACTGAGAGCACCCAGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000380559.7
ENST00000388710.8
ENST00000542621.5
ENST00000680146.1
CDS CAA 72 bp CTTCTCGGGCTCAAGGGCCGGGCCACGAGCTTGCGGTaGCCTCCGATGAGCTTAATCACAAAGTGCTCCCGG +
Preference number: 6 (lower is better)
Translates to: LLGLKGRATSLR*PPMSLITKCSR
Trigger: CCGGGAGCACTTTGTGATTAAGCTCATCGGAGGCAACCGCAAGCTCGTGGCCCGGCCCTTGAGCCCGAGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CAA 72 bp GGACACAGGGGTGGAGATCCCAGAGGCTTTCAGCTTTaGACAGGTCACCCTGCGGGTCTGGACACCTCCCCC +
Preference number: 6 (lower is better)
Translates to: GHRGGDPRGFQL*TGHPAGLDTSP
Trigger: GGGGGAGGTGTCCAGACCCGCAGGGTGACCTGTCAAAAGCTGAAAGCCTCTGGGATCTCCACCCCTGTGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CAA 72 bp AGCTGCTGGTTACAGGCCTGGGTGTCCACAGGCCGCTaGGCGACCTGGGTGCACATGTCATTGGACACAGGG +
Preference number: 6 (lower is better)
Translates to: SCWLQAWVSTGR*ATWVHMSLDTG
Trigger: CCCTGTGTCCAATGACATGTGCACCCAGGTCGCCAAGCGGCCTGTGGACACCCAGGCCTGTAACCAGCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CAA 72 bp CCGCTCTCCAGCCTAACTTTGACAGAGCTCAGCCACTaGCTCCCCAAGGCTGCCAACAGCAGGGGTGGCACC +
Preference number: 6 (lower is better)
Translates to: PLSSLTLTELSH*LPKAANSRGGT
Trigger: GGTGCCACCCCTGCTGTTGGCAGCCTTGGGGAGCAAGTGGCTGAGCTCTGTCAAAGTTAGGCTGGAGAGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS CAA 72 bp TGGGGTCTGCCTTGGCCACCGCTCTCCAGCCTAACTTaGACAGAGCTCAGCCACTTGCTCCCCAAGGCTGCC +
Preference number: 6 (lower is better)
Translates to: WGLPWPPLSSLT*TELSHLLPKAA
Trigger: GGCAGCCTTGGGGAGCAAGTGGCTGAGCTCTGTCAAAGTTAGGCTGGAGAGCGGTGGCCAAGGCAGACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS CAA 90 bp TCCACACACAGCTGCTGGTTACAGGCCTGGGTGTCCACAGGCCGCTaGGCGACCTGGGTGCACATGTCATTGGACACAGGGGTGGAGATC +
Preference number: 6 (lower is better)
Translates to: STHSCWLQAWVSTGR*ATWVHMSLDTGVEI
Trigger: GATCTCCACCCCTGTGTCCAATGACATGTGCACCCAGGTCGCCAAGCGGCCTGTGGACACCCAGGCCTGTAACCAGCAGCTGTGTGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CAA 90 bp GGTACATCCTGGGGTCTGCCTTGGCCACCGCTCTCCAGCCTAACTTaGACAGAGCTCAGCCACTTGCTCCCCAAGGCTGCCAACAGCAGG +
Preference number: 6 (lower is better)
Translates to: GTSWGLPWPPLSSLT*TELSHLLPKAANSR
Trigger: CCTGCTGTTGGCAGCCTTGGGGAGCAAGTGGCTGAGCTCTGTCAAAGTTAGGCTGGAGAGCGGTGGCCAAGGCAGACCCCAGGATGTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS TCA 72 bp GGCAGACACCTCGCCCTAGGCCACAGAGCTAGTTGGTaGCAGCAGGATGAGAAGCCAGGCCTCTTGGTTGCC +
Preference number: 6 (lower is better)
Translates to: GRHLALGHRASW*QQDEKPGLLVA
Trigger: GGCAACCAAGAGGCCTGGCTTCTCATCCTGCTGTCACCAACTAGCTCTGTGGCCTAGGGCGAGGTGTCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS TCA 72 bp AGGAGTACAGGCCCTGATCCGAGGAGGACACGTTTGTaGGCAGCAAGGAGCCTTCGTGCAGATGGTGCGGGG +
Preference number: 6 (lower is better)
Translates to: RSTGPDPRRTRL*AARSLRADGAG
Trigger: CCCCGCACCATCTGCACGAAGGCTCCTTGCTGCTCACAAACGTGTCCTCCTCGGATCAGGGCCTGTACTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000380559.7
ENST00000388710.8
ENST00000542621.5
ENST00000680146.1
CDS TCA 72 bp CAGGACCAGCTGTGTTCCCAGAGGAGACGTCAGCACTaGAGGAAGGTTCGGTCCAGTGGCAGCGAGCAAGGC +
Preference number: 6 (lower is better)
Translates to: QDQLCSQRRRQH*RKVRSSGSEQG
Trigger: GCCTTGCTCGCTGCCACTGGACCGAACCTTCCTTCAGTGCTGACGTCTCCTCTGGGAACACAGCTGGTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000380559.7
ENST00000388710.8
ENST00000542621.5
ENST00000680146.1
CDS GCA 72 bp TGGGTTGAACTCAGGAATTTCCCCGCTGCATGGGCCTaGATAACAGGCACGCTGGGATGCTGGCTTGGGCCC +
Preference number: 6 (lower is better)
Translates to: WVELRNFPAAWA*ITGTLGCWLGP
Trigger: GGGCCCAAGCCAGCATCCCAGCGTGCCTGTTATGCAGGCCCATGCAGCGGGGAAATTCCTGAGTTCAACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276935.6
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS GCA 72 bp AGTCGATACTGCTTCTTGCTGGGCAGGGATCCAAATTaGAGGACTTCAGGAGCTGTGGGGGCCGGCGGCTGG +
Preference number: 6 (lower is better)
Translates to: SRYCFLLGRDPN*RTSGAVGAGGW
Trigger: CCAGCCGCCGGCCCCCACAGCTCCTGAAGTCCTGCAATTTGGATCCCTGCCCAGCAAGAAGCAGTATCGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS GCA 72 bp CGTGTTTATGAGGCGAGAGAGTCACTGGGGAAGTCCTaGGCTCCGAGGGCTTCAGGAGCGTGTCCTGGTGCT +
Preference number: 6 (lower is better)
Translates to: RVYEARESLGKS*APRASGACPGA
Trigger: AGCACCAGGACACGCTCCTGAAGCCCTCGGAGCGCAGGACTTCCCCAGTGACTCTCTCGCCTCATAAACACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS GCA 72 bp AACTTTGACAGAGCTCAGCCACTTGCTCCCCAAGGCTaGCAACAGCAGGGGTGGCACCAGCCTGCAGCTGTC +
Preference number: 6 (lower is better)
Translates to: NFDRAQPLAPQG*QQQGWHQPAAV
Trigger: GACAGCTGCAGGCTGGTGCCACCCCTGCTGTTGGCAGCCTTGGGGAGCAAGTGGCTGAGCTCTGTCAAAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS CCA 72 bp AAAGACAGGAGCACCTGGCACCTGACTATTCGCACCTaGGTCCCCACACCACAGGTGACTGTGCAGGCCGAC +
Preference number: 6 (lower is better)
Translates to: KDRSTWHLTIRT*VPTPQVTVQAD
Trigger: GTCGGCCTGCACAGTCACCTGTGGTGTGGGGACCCAGGTGCGAATAGTCAGGTGCCAGGTGCTCCTGTCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276935.6
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CCA 72 bp GCTGCATGGGCCTGCATAACAGGCACGCTGGGATGCTaGCTTGGGCCCTTCACACTCGTCAATAGGCAGGTC +
Preference number: 6 (lower is better)
Translates to: AAWACITGTLGC*LGPFTLVNRQV
Trigger: GACCTGCCTATTGACGAGTGTGAAGGGCCCAAGCCAGCATCCCAGCGTGCCTGTTATGCAGGCCCATGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276935.6
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CCA 72 bp TTACAGGCCTGGGTGTCCACAGGCCGCTTGGCGACCTaGGTGCACATGTCATTGGACACAGGGGTGGAGATC +
Preference number: 6 (lower is better)
Translates to: LQAWVSTGRLAT*VHMSLDTGVEI
Trigger: GATCTCCACCCCTGTGTCCAATGACATGTGCACCCAGGTCGCCAAGCGGCCTGTGGACACCCAGGCCTGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CAA 72 bp TCCACAGGCCGCTTGGCGACCTGGGTGCACATGTCATaGGACACAGGGGTGGAGATCCCAGAGGCTTTCAGC +
Preference number: 6 (lower is better)
Translates to: STGRLATWVHMS*DTGVEIPEAFS
Trigger: GCTGAAAGCCTCTGGGATCTCCACCCCTGTGTCCAATGACATGTGCACCCAGGTCGCCAAGCGGCCTGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CAA 90 bp CATGTCATTGGACACAGGGGTGGAGATCCCAGAGGCTTTCAGCTTTaGACAGGTCACCCTGCGGGTCTGGACACCTCCCCCACAGCTCCG +
Preference number: 6 (lower is better)
Translates to: HVIGHRGGDPRGFQL*TGHPAGLDTSPTAP
Trigger: CGGAGCTGTGGGGGAGGTGTCCAGACCCGCAGGGTGACCTGTCAAAAGCTGAAAGCCTCTGGGATCTCCACCCCTGTGTCCAATGACATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CAA 90 bp ACTCTCCTCCTCAAGATGGTTCCCAGCACTGCATCCTCCCCGACTTaGCAGGAGTGTGAAGTGAGACTTGCGTCGGGTGCCCCCATCCCC +
Preference number: 6 (lower is better)
Translates to: TLLLKMVPSTASSPT*QECEVRLASGAPIP
Trigger: GGGGATGGGGGCACCCGACGCAAGTCTCACTTCACACTCCTGCAAAGTCGGGGAGGATGCAGTGCTGGGAACCATCTTGAGGAGGAGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS GCA 72 bp TCATCCGATTTGGTTGCGGAGAGCTGGGATTTATACTaGCCTCGGACCAGCCGGCAGGTGGACCCATCTCCG +
Preference number: 6 (lower is better)
Translates to: SSDLVAESWDLY*PRTSRQVDPSP
Trigger: CGGAGATGGGTCCACCTGCCGGCTGGTCCGAGGGCAGTATAAATCCCAGCTCTCCGCAACCAAATCGGATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276935.6
ENST00000327883.11
ENST00000380548.9
ENST00000380566.8
ENST00000680146.1
CDS GCA 72 bp TGCTCTCAGTCAGCTCTCCATGAAGATTGGCCGCCCTaGAGGAGTACAGGCCCTGATCCGAGGAGGACACGT +
Preference number: 6 (lower is better)
Translates to: CSQSALHEDWPP*RSTGPDPRRTR
Trigger: ACGTGTCCTCCTCGGATCAGGGCCTGTACTCCTGCAGGGCGGCCAATCTTCATGGAGAGCTGACTGAGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000380559.7
ENST00000388710.8
ENST00000542621.5
ENST00000680146.1
CDS GCA 72 bp GCTGTTTCACCTTCTCGCAGTACCTGGTGGTGTCTCTaGACTCCACTGGGAAAGGAGGACGGGGTCGGGAGA +
Preference number: 6 (lower is better)
Translates to: AVSPSRSTWWCL*TPLGKEDGVGR
Trigger: TCTCCCGACCCCGTCCTCCTTTCCCAGTGGAGTGCAGAGACACCACCAGGTACTGCGAGAAGGTGAAACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS CCA 72 bp CCGTTGAGAGGCCGGTTTTCAGCATCTTTCGGCAAATaGCGCTTCGAGTCTGGGTGCCTTCCCCGCAGCTTG +
Preference number: 6 (lower is better)
Translates to: PLRGRFSASFGK*RFESGCLPRSL
Trigger: CAAGCTGCGGGGAAGGCACCCAGACTCGAAGCGCCATTTGCCGAAAGATGCTGAAAACCGGCCTCTCAACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CCA 72 bp GAAGCCAGACACGTGTTTATGAGGCGAGAGAGTCACTaGGGAAGTCCTGCGCTCCGAGGGCTTCAGGAGCGT +
Preference number: 6 (lower is better)
Translates to: EARHVFMRRESH*GSPALRGLQER
Trigger: ACGCTCCTGAAGCCCTCGGAGCGCAGGACTTCCCCAGTGACTCTCTCGCCTCATAAACACGTGTCTGGCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CCA 72 bp CAAGTCAAGGGTGGAGGCCGCCGTGCTTGGGCTGCATaGCATGCACGATCCTTGTGTAGGTCTTGTTGGAGG +
Preference number: 6 (lower is better)
Translates to: QVKGGGRRAWAA*HARSLCRSCWR
Trigger: CCTCCAACAAGACCTACACAAGGATCGTGCATGCCATGCAGCCCAAGCACGGCGGCCTCCACCCTTGACTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS CCA 72 bp ACTGCAGGGGAACTGGAGGCTGATTTCCTCCAGCACTaGGCCAATAGCACCTGGCTCTCTCAGGGCCAGGAT +
Preference number: 6 (lower is better)
Translates to: TAGELEADFLQH*ANSTWLSQGQD
Trigger: ATCCTGGCCCTGAGAGAGCCAGGTGCTATTGGCCCAGTGCTGGAGGAAATCAGCCTCCAGTTCCCCTGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS CCA 72 bp GGTTTCAGCCACTGGGGTACATCCTGGGGTCTGCCTTaGCCACCGCTCTCCAGCCTAACTTTGACAGAGCTC +
Preference number: 6 (lower is better)
Translates to: GFSHWGTSWGLP*PPLSSLTLTEL
Trigger: GAGCTCTGTCAAAGTTAGGCTGGAGAGCGGTGGCCAAGGCAGACCCCAGGATGTACCCCAGTGGCTGAAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS CAA 72 bp TCCTCACTTCTCGGGCTCAAGGGCCGGGCCACGAGCTaGCGGTTGCCTCCGATGAGCTTAATCACAAAGTGC +
Preference number: 6 (lower is better)
Translates to: SSLLGLKGRATS*RLPPMSLITKC
Trigger: GCACTTTGTGATTAAGCTCATCGGAGGCAACCGCAAGCTCGTGGCCCGGCCCTTGAGCCCGAGAAGTGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CAA 72 bp GGGTTTCAGCCACTGGGGTACATCCTGGGGTCTGCCTaGGCCACCGCTCTCCAGCCTAACTTTGACAGAGCT +
Preference number: 6 (lower is better)
Translates to: GFQPLGYILGSA*ATALQPNFDRA
Trigger: AGCTCTGTCAAAGTTAGGCTGGAGAGCGGTGGCCAAGGCAGACCCCAGGATGTACCCCAGTGGCTGAAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS CAA 90 bp GATTTATACTGCCCTCGGACCAGCCGGCAGGTGGACCCATCTCCGTaGCAGACCCCACAGTTATCTTCCTTGACGGTGCTTCCCAGCTGG +
Preference number: 6 (lower is better)
Translates to: DLYCPRTSRQVDPSP*QTPQLSSLTVLPSW
Trigger: CCAGCTGGGAAGCACCGTCAAGGAAGATAACTGTGGGGTCTGCAACGGAGATGGGTCCACCTGCCGGCTGGTCCGAGGGCAGTATAAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276935.6
ENST00000327883.11
ENST00000380548.9
ENST00000380566.8
ENST00000380570.8
ENST00000680146.1
CDS CAA 90 bp AAGGGTGGAGGCCGCCGTGCTTGGGCTGCATGGCATGCACGATCCTaGTGTAGGTCTTGTTGGAGGCTCTCAGACCATTCATCTTTCCCC +
Preference number: 6 (lower is better)
Translates to: KGGGRRAWAAWHARS*CRSCWRLSDHSSFP
Trigger: GGGGAAAGATGAATGGTCTGAGAGCCTCCAACAAGACCTACACAAGGATCGTGCATGCCATGCAGCCCAAGCACGGCGGCCTCCACCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS TCA 72 bp GCAGGCCACCAAAGAGCCCATCTGTCTCGTCTGGGTTaGACTCAGGAATTTCCCCGCTGCATGGGCCTGCAT +
Preference number: 6 (lower is better)
Translates to: AGHQRAHLSRLG*TQEFPRCMGLH
Trigger: ATGCAGGCCCATGCAGCGGGGAAATTCCTGAGTTCAACCCAGACGAGACAGATGGGCTCTTTGGTGGCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276935.6
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS TCA 72 bp TCAGCCATGCGCTGCTTGCAAAGAACCTCACGTTTCTaGACACCCCCGCCACACGTTCTGGAACACGGCTGC +
Preference number: 6 (lower is better)
Translates to: SAMRCLQRTSRF*TPPPHVLEHGC
Trigger: GCAGCCGTGTTCCAGAACGTGTGGCGGGGGTGTTCAGAAACGTGAGGTTCTTTGCAAGCAGCGCATGGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS TCA 72 bp AGGCAGGGGCGGGCACAGGGTGGAATTGACAACCGTTaGGAGGCCGGTTTTCAGCATCTTTCGGCAAATGGC +
Preference number: 6 (lower is better)
Translates to: RQGRAQGGIDNR*EAGFQHLSANG
Trigger: GCCATTTGCCGAAAGATGCTGAAAACCGGCCTCTCAACGGTTGTCAATTCCACCCTGTGCCCGCCCCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS TCA 72 bp GTCTGGCAGAAGACTTGTCTGTGTTGCACAGCTAGGTaGGGCCCGATGCAAGGCCCATTGCACGAGAAGGGC +
Preference number: 6 (lower is better)
Translates to: VWQKTCLCCTAR*GPMQGPLHEKG
Trigger: GCCCTTCTCGTGCAATGGGCCTTGCATCGGGCCTCACCTAGCTGTGCAACACAGACAAGTCTTCTGCCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542621.5
CDS GCA 72 bp GCAGTGTGCCAGGAGTTGCCCGACGGCAGCATTCCATaGTTGGATCCTTGCCGGAATCAGAATCGGACACTG +
Preference number: 6 (lower is better)
Translates to: AVCQELPDGSIP*LDPCRNQNRTL
Trigger: CAGTGTCCGATTCTGATTCCGGCAAGGATCCAAGCATGGAATGCTGCCGTCGGGCAACTCCTGGCACACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327883.11
ENST00000380548.9
ENST00000380566.8
ENST00000380570.8
ENST00000431052.6
CDS GCA 72 bp CAGGAAAGCCAGAAAGAGGAGCAGTGTGCCAGGAGTTaGCCGACGGCAGCATTCCATGCTTGGATCCTTGCC +
Preference number: 6 (lower is better)
Translates to: QESQKEEQCARS*PTAAFHAWILA
Trigger: GGCAAGGATCCAAGCATGGAATGCTGCCGTCGGGCAACTCCTGGCACACTGCTCCTCTTTCTGGCTTTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327883.11
ENST00000380548.9
ENST00000380566.8
ENST00000380570.8
ENST00000431052.6
CDS GCA 72 bp GTCTTACATTTGGTTGCGGAGAGCTGGGATTTATACTaGCCTCGGACCAGCCGGCAGGTGGACCCATCTCCG +
Preference number: 6 (lower is better)
Translates to: VLHLVAESWDLY*PRTSRQVDPSP
Trigger: CGGAGATGGGTCCACCTGCCGGCTGGTCCGAGGGCAGTATAAATCCCAGCTCTCCGCAACCAAATGTAAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380570.8
CDS GCA 72 bp ACCCCATGCCCTATGCTCAGGGTCGGTCCCAGGGACTaGTCTCTGCACTCGATGCTCTATGGGGAATTTGCA +
Preference number: 6 (lower is better)
Translates to: TPCPMLRVGPRD*SLHSMLYGEFA
Trigger: TGCAAATTCCCCATAGAGCATCGAGTGCAGAGAGCAGTCCCTGGGACCGACCCTGAGCATAGGGCATGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS GCA 72 bp AGACTTGTCTGTGTTGCACAGCTAGGTGAGGCCCGATaGAAGGCCCATTGCACGAGAAGGGCAGTCTCTCCG +
Preference number: 6 (lower is better)
Translates to: RLVCVAQLGEAR*KAHCTRRAVSP
Trigger: CGGAGAGACTGCCCTTCTCGTGCAATGGGCCTTGCATCGGGCCTCACCTAGCTGTGCAACACAGACAAGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542621.5
CDS CCA 72 bp CTCGTCTGGGTTGAACTCAGGAATTTCCCCGCTGCATaGGCCTGCATAACAGGCACGCTGGGATGCTGGCTT +
Preference number: 6 (lower is better)
Translates to: LVWVELRNFPAA*ACITGTLGCWL
Trigger: AAGCCAGCATCCCAGCGTGCCTGTTATGCAGGCCCATGCAGCGGGGAAATTCCTGAGTTCAACCCAGACGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276935.6
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CCA 72 bp TCTCCATTCCTGGCCCAGCTGATGGTAGGCCTTGGGTaGCCGATGGCCTCACAGTGCAGAAGAACACTCAGT +
Preference number: 6 (lower is better)
Translates to: SPFLAQLMVGLG*PMASQCRRTLS
Trigger: ACTGAGTGTTCTTCTGCACTGTGAGGCCATCGGCCACCCAAGGCCTACCATCAGCTGGGCCAGGAATGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CCA 72 bp CACATTAGCCAAGTCAAGGGTGGAGGCCGCCGTGCTTaGGCTGCATGGCATGCACGATCCTTGTGTAGGTCT +
Preference number: 6 (lower is better)
Translates to: HISQVKGGGRRA*AAWHARSLCRS
Trigger: AGACCTACACAAGGATCGTGCATGCCATGCAGCCCAAGCACGGCGGCCTCCACCCTTGACTTGGCTAATGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS CAA 72 bp TGCAGGCCACCAAAGAGCCCATCTGTCTCGTCTGGGTaGAACTCAGGAATTTCCCCGCTGCATGGGCCTGCA +
Preference number: 6 (lower is better)
Translates to: CRPPKSPSVSSG*NSGISPLHGPA
Trigger: TGCAGGCCCATGCAGCGGGGAAATTCCTGAGTTCAACCCAGACGAGACAGATGGGCTCTTTGGTGGCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276935.6
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CAA 72 bp ACGCACAGGTTCTCCTCAGCAGGCTCCCGAGTCTGTTaGTTCAAGCAGCTCACCACAGCCTCCTGGACACCT +
Preference number: 6 (lower is better)
Translates to: THRFSSAGSRVC*FKQLTTASWTP
Trigger: AGGTGTCCAGGAGGCTGTGGTGAGCTGCTTGAACAAACAGACTCGGGAGCCTGCTGAGGAGAACCTGTGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276935.6
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CAA 72 bp CTCAAGATGGTTCCCAGCACTGCATCCTCCCCGACTTaGCAGGAGTGTGAAGTGAGACTTGCGTCGGGTGCC +
Preference number: 6 (lower is better)
Translates to: LKMVPSTASSPT*QECEVRLASGA
Trigger: GGCACCCGACGCAAGTCTCACTTCACACTCCTGCAAAGTCGGGGAGGATGCAGTGCTGGGAACCATCTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS CAA 90 bp GGCCTGATGGAGGAAGAGAAAGGCAGGGGCGGGCACAGGGTGGAATaGACAACCGTTGAGAGGCCGGTTTTCAGCATCTTTCGGCAAATG +
Preference number: 6 (lower is better)
Translates to: GLMEEEKGRGGHRVE*TTVERPVFSIFRQM
Trigger: CATTTGCCGAAAGATGCTGAAAACCGGCCTCTCAACGGTTGTCAATTCCACCCTGTGCCCGCCCCTGCCTTTCTCTTCCTCCATCAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS GCA 72 bp TCAGCATCTTTCGGCAAATGGCGCTTCGAGTCTGGGTaGCTTCCCCGCAGCTTGTGGAACACTCTGTCCAGT +
Preference number: 6 (lower is better)
Translates to: SASFGKWRFESG*LPRSLWNTLSS
Trigger: ACTGGACAGAGTGTTCCACAAGCTGCGGGGAAGGCACCCAGACTCGAAGCGCCATTTGCCGAAAGATGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS GCA 72 bp GCCCTATGCTCAGGGTCGGTCCCAGGGACTGCTCTCTaGACTCGATGCTCTATGGGGAATTTGCAGAAGGTT +
Preference number: 6 (lower is better)
Translates to: ALCSGSVPGTAL*TRCSMGNLQKV
Trigger: AACCTTCTGCAAATTCCCCATAGAGCATCGAGTGCAGAGAGCAGTCCCTGGGACCGACCCTGAGCATAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS GCA 72 bp GTGAAACAGAGACTAATGAACGCAGCCTGTGTGAGGTaGAGCCGGGGGTTTCAGCCACTGGGGTACATCCTG +
Preference number: 6 (lower is better)
Translates to: VKQRLMNAACVR*SRGFQPLGYIL
Trigger: CAGGATGTACCCCAGTGGCTGAAACCCCCGGCTGCACCTCACACAGGCTGCGTTCATTAGTCTCTGTTTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS CCA 72 bp GCAACCACAGTATCATCCGATTTGGTTGCGGAGAGCTaGGATTTATACTGCCCTCGGACCAGCCGGCAGGTG +
Preference number: 6 (lower is better)
Translates to: ATTVSSDLVAES*DLYCPRTSRQV
Trigger: CACCTGCCGGCTGGTCCGAGGGCAGTATAAATCCCAGCTCTCCGCAACCAAATCGGATGATACTGTGGTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276935.6
ENST00000327883.11
ENST00000380548.9
ENST00000380566.8
ENST00000680146.1
CDS CCA 72 bp GTTTTTGGGCTACAGCCTCCTGTGTGCATTCCTCGATaGTCGATGCAGAGGACCACACGGTATCTGAGGCCC +
Preference number: 6 (lower is better)
Translates to: VFGLQPPVCIPR*SMQRTTRYLRP
Trigger: GGGCCTCAGATACCGTGTGGTCCTCTGCATCGACCATCGAGGAATGCACACAGGAGGCTGTAGCCCAAAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276935.6
ENST00000327883.11
ENST00000380548.9
ENST00000546040.1
ENST00000680146.1
CDS CCA 72 bp AAGCGGTTACAAGCTTGCACCGTGCTGGGCTTGGGCTaGCGACACAGCTCATCAGCCAGGATGACTGTTTCA +
Preference number: 6 (lower is better)
Translates to: KRLQACTVLGLG*RHSSSARMTVS
Trigger: TGAAACAGTCATCCTGGCTGATGAGCTGTGTCGCCAGCCCAAGCCCAGCACGGTGCAAGCTTGTAACCGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CCA 72 bp TTCTTCTCCATTCCTGGCCCAGCTGATGGTAGGCCTTaGGTGGCCGATGGCCTCACAGTGCAGAAGAACACT +
Preference number: 6 (lower is better)
Translates to: FFSIPGPADGRP*VADGLTVQKNT
Trigger: AGTGTTCTTCTGCACTGTGAGGCCATCGGCCACCCAAGGCCTACCATCAGCTGGGCCAGGAATGGAGAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS TCA 72 bp ACCCATCTCCGTTGCAGACCCCACAGTTATCTTCCTTaGCGGTGCTTCCCAGCTGGTGATCGCAGCCAACAA +
Preference number: 6 (lower is better)
Translates to: THLRCRPHSYLP*RCFPAGDRSQQ
Trigger: TTGTTGGCTGCGATCACCAGCTGGGAAGCACCGTCAAGGAAGATAACTGTGGGGTCTGCAACGGAGATGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276935.6
ENST00000327883.11
ENST00000380548.9
ENST00000380566.8
ENST00000380570.8
ENST00000680146.1
CDS TCA 72 bp AGGAAGAGAAAGGCAGGGGCGGGCACAGGGTGGAATTaGCAACCGTTGAGAGGCCGGTTTTCAGCATCTTTC +
Preference number: 6 (lower is better)
Translates to: RKRKAGAGTGWN*QPLRGRFSASF
Trigger: GAAAGATGCTGAAAACCGGCCTCTCAACGGTTGTCAATTCCACCCTGTGCCCGCCCCTGCCTTTCTCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS TCA 72 bp GTCTGGCAGAAGACTTGTCTGTGTTGCACAGCTAGGTaGGGCCCGATGCAAGGCCCATTGCACTTGGATCAC +
Preference number: 6 (lower is better)
Translates to: VWQKTCLCCTAR*GPMQGPLHLDH
Trigger: GTGATCCAAGTGCAATGGGCCTTGCATCGGGCCTCACCTAGCTGTGCAACACAGACAAGTCTTCTGCCAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388710.8
CDS TCA 72 bp GTCTGGCAGAAGACTTGTCTGTGTTGCACAGCTAGGTaGGGCCCGATGCAAGGCCCATTGCACTGGAAAGCA +
Preference number: 6 (lower is better)
Translates to: VWQKTCLCCTAR*GPMQGPLHWKA
Trigger: TGCTTTCCAGTGCAATGGGCCTTGCATCGGGCCTCACCTAGCTGTGCAACACAGACAAGTCTTCTGCCAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS GCA 72 bp ATGTGGGGCTTTGTTTTTGGGCTACAGCCTCCTGTGTaGATTCCTCGATGGTCGATGCAGAGGACCACACGG +
Preference number: 6 (lower is better)
Translates to: MWGFVFGLQPPV*IPRWSMQRTTR
Trigger: CCGTGTGGTCCTCTGCATCGACCATCGAGGAATGCACACAGGAGGCTGTAGCCCAAAAACAAAGCCCCACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276935.6
ENST00000327883.11
ENST00000380548.9
ENST00000546040.1
ENST00000680146.1
CDS GCA 72 bp GAGGAGGACACGTTTGTGAGCAGCAAGGAGCCTTCGTaGAGATGGTGCGGGGAGCCCAGTTTGCTTTTATTC +
Preference number: 6 (lower is better)
Translates to: EEDTFVSSKEPS*RWCGEPSLLLF
Trigger: GAATAAAAGCAAACTGGGCTCCCCGCACCATCTGCACGAAGGCTCCTTGCTGCTCACAAACGTGTCCTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000380559.7
ENST00000388710.8
ENST00000542621.5
ENST00000680146.1
CDS GCA 72 bp TCAGGGTCGGTCCCAGGGACTGCTCTCTGCACTCGATaGTCTATGGGGAATTTGCAGAAGGTTCTTTGGGGT +
Preference number: 6 (lower is better)
Translates to: SGSVPGTALCTR*SMGNLQKVLWG
Trigger: ACCCCAAAGAACCTTCTGCAAATTCCCCATAGAGCATCGAGTGCAGAGAGCAGTCCCTGGGACCGACCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS CCA 72 bp GTTTTCAGCATCTTTCGGCAAATGGCGCTTCGAGTCTaGGTGCCTTCCCCGCAGCTTGTGGAACACTCTGTC +
Preference number: 6 (lower is better)
Translates to: VFSIFRQMALRV*VPSPQLVEHSV
Trigger: GACAGAGTGTTCCACAAGCTGCGGGGAAGGCACCCAGACTCGAAGCGCCATTTGCCGAAAGATGCTGAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CCA 72 bp TGGCGACCTGGGTGCACATGTCATTGGACACAGGGGTaGAGATCCCAGAGGCTTTCAGCTTTTGACAGGTCA +
Preference number: 6 (lower is better)
Translates to: WRPGCTCHWTQG*RSQRLSAFDRS
Trigger: TGACCTGTCAAAAGCTGAAAGCCTCTGGGATCTCCACCCCTGTGTCCAATGACATGTGCACCCAGGTCGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CCA 72 bp CCATCTCTGTGTGTCTTACATTTGGTTGCGGAGAGCTaGGATTTATACTGCCCTCGGACCAGCCGGCAGGTG +
Preference number: 6 (lower is better)
Translates to: PSLCVLHLVAES*DLYCPRTSRQV
Trigger: CACCTGCCGGCTGGTCCGAGGGCAGTATAAATCCCAGCTCTCCGCAACCAAATGTAAGACACACAGAGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380570.8
CDS CCA 72 bp AGAGTTTCAGCTGTTTCACCTTCTCGCAGTACCTGGTaGTGTCTCTGCACTCCACTGGGAAAGGAGGACGGG +
Preference number: 6 (lower is better)
Translates to: RVSAVSPSRSTW*CLCTPLGKEDG
Trigger: CCCGTCCTCCTTTCCCAGTGGAGTGCAGAGACACCACCAGGTACTGCGAGAAGGTGAAACAGCTGAAACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS CAA 72 bp GTGTGCCAGGAGTTGCCCGACGGCAGCATTCCATGCTaGGATCCTTGCCGGAATCAGAATCGGACACTGAAT +
Preference number: 6 (lower is better)
Translates to: VCQELPDGSIPC*DPCRNQNRTLN
Trigger: ATTCAGTGTCCGATTCTGATTCCGGCAAGGATCCAAGCATGGAATGCTGCCGTCGGGCAACTCCTGGCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327883.11
ENST00000380548.9
ENST00000380566.8
ENST00000380570.8
ENST00000431052.6
CDS CAA 72 bp AGGCCGACCCCACATGTGAGACTACATGGACTCCACTaGCCAATTTCCCACCTTGCTGGGCAGGGATCCAAA +
Preference number: 6 (lower is better)
Translates to: RPTPHVRLHGLH*PISHLAGQGSK
Trigger: TTTGGATCCCTGCCCAGCAAGGTGGGAAATTGGCAAGTGGAGTCCATGTAGTCTCACATGTGGGGTCGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CAA 72 bp CAATTAAAGCGGTTACAAGCTTGCACCGTGCTGGGCTaGGGCTGGCGACACAGCTCATCAGCCAGGATGACT +
Preference number: 6 (lower is better)
Translates to: QLKRLQACTVLG*GWRHSSSARMT
Trigger: AGTCATCCTGGCTGATGAGCTGTGTCGCCAGCCCAAGCCCAGCACGGTGCAAGCTTGTAACCGCTTTAATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CAA 72 bp GAGGAAGAGAAAGGCAGGGGCGGGCACAGGGTGGAATaGACAACCGTTGAGAGGCCGGTTTTCAGCATCTTT +
Preference number: 6 (lower is better)
Translates to: EEEKGRGGHRVE*TTVERPVFSIF
Trigger: AAAGATGCTGAAAACCGGCCTCTCAACGGTTGTCAATTCCACCCTGTGCCCGCCCCTGCCTTTCTCTTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CAA 72 bp CAGTGTAAATTCCCGCAGGAAAACAGCCCCTTGGCTTaGGTCTCCGCATACCTGTCCGGCGATACAGAGCAG +
Preference number: 6 (lower is better)
Translates to: QCKFPQENSPLA*VSAYLSGDTEQ
Trigger: CTGCTCTGTATCGCCGGACAGGTATGCGGAGACCAAAGCCAAGGGGCTGTTTTCCTGCGGGAATTTACACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680146.1
CDS CAA 90 bp AGAGGAGCAGTGTGCCAGGAGTTGCCCGACGGCAGCATTCCATGCTaGGATCCTTGCCGGAATCAGAATCGGACACTGAATAAGCTGCTA +
Preference number: 6 (lower is better)
Translates to: RGAVCQELPDGSIPC*DPCRNQNRTLNKLL
Trigger: TAGCAGCTTATTCAGTGTCCGATTCTGATTCCGGCAAGGATCCAAGCATGGAATGCTGCCGTCGGGCAACTCCTGGCACACTGCTCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327883.11
ENST00000380548.9
ENST00000380566.8
ENST00000380570.8
ENST00000431052.6
CDS CAA 90 bp GTGAGCAGCAAGGAGCCTTCGTGCAGATGGTGCGGGGAGCCCAGTTaGCTTTTATTCCTGAACCAAGTGACTTCAGCTTCAGGCACTCCT +
Preference number: 6 (lower is better)
Translates to: VSSKEPSCRWCGEPS*LLFLNQVTSASGTP
Trigger: AGGAGTGCCTGAAGCTGAAGTCACTTGGTTCAGGAATAAAAGCAAACTGGGCTCCCCGCACCATCTGCACGAAGGCTCCTTGCTGCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000380559.7
ENST00000388710.8
ENST00000542621.5
ENST00000680146.1
CDS CAA 90 bp CATGAGCACCCCTGCCTCATTCTGAGCAAGGCAGCTGAATTCCCCTaGAGACCCACCGCTAAGGTTTGCAACTTGAAGGATCTGTCCAGC +
Preference number: 6 (lower is better)
Translates to: HEHPCLILSKAAEFP*RPTAKVCNLKDLSS
Trigger: GCTGGACAGATCCTTCAAGTTGCAAACCTTAGCGGTGGGTCTCAAGGGGAATTCAGCTGCCTTGCTCAGAATGAGGCAGGGGTGCTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000380538.4
ENST00000380545.9
ENST00000380548.9
ENST00000380559.7
ENST00000388710.8
ENST00000542621.5
ENST00000680146.1
CDS CAA 90 bp TCAACAAGTCCAAAGGTCGCCCATCTCTGTGTGTCTTACATTTGGTaGCGGAGAGCTGGGATTTATACTGCCCTCGGACCAGCCGGCAGG +
Preference number: 6 (lower is better)
Translates to: STSPKVAHLCVSYIW*RRAGIYTALGPAGR
Trigger: CCTGCCGGCTGGTCCGAGGGCAGTATAAATCCCAGCTCTCCGCAACCAAATGTAAGACACACAGAGATGGGCGACCTTTGGACTTGTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380570.8
CDS TCA 72 bp AGAAGACGTCTCTGGTCTGTAGGCCGACCCCACATGTaGGACTACATGGACTCCACTTGCCAATTTCCCACC +
Preference number: 6 (lower is better)
Translates to: RRRLWSVGRPHM*DYMDSTCQFPT
Trigger: GGTGGGAAATTGGCAAGTGGAGTCCATGTAGTCTCACATGTGGGGTCGGCCTACAGACCAGAGACGTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS TCA 72 bp CACATTCAGGTGAGCCCAGAGGCATTTATAGCTTCTTaGATCCCCCTTCCCTGGGGCTGCTCTACAGGGACA +
Preference number: 6 (lower is better)
Translates to: HIQVSPEAFIAS*IPLPWGCSTGT
Trigger: TGTCCCTGTAGAGCAGCCCCAGGGAAGGGGGATTCAAGAAGCTATAAATGCCTCTGGGCTCACCTGAATGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380545.9
ENST00000388710.8
ENST00000542621.5
CDS CCA 72 bp GACACGTTTGTGAGCAGCAAGGAGCCTTCGTGCAGATaGTGCGGGGAGCCCAGTTTGCTTTTATTCCTGAAC +
Preference number: 6 (lower is better)
Translates to: DTFVSSKEPSCR*CGEPSLLLFLN
Trigger: GTTCAGGAATAAAAGCAAACTGGGCTCCCCGCACCATCTGCACGAAGGCTCCTTGCTGCTCACAAACGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000380559.7
ENST00000388710.8
ENST00000542621.5
ENST00000680146.1
CDS CCA 72 bp CGAATCAGTGTAAATTCCCGCAGGAAAACAGCCCCTTaGCTTTGGTCTCCGCATACCTGTCCGGCGATACAG +
Preference number: 6 (lower is better)
Translates to: RISVNSRRKTAP*LWSPHTCPAIQ
Trigger: CTGTATCGCCGGACAGGTATGCGGAGACCAAAGCCAAGGGGCTGTTTTCCTGCGGGAATTTACACTGATTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680146.1
CDS CAA 90 bp CGCTGGGACAGTCATCTTTCTTGCATGCTTGCTGGCAGGCAGGTTTaGAAGCTGAACAGAAGGTCTCAGGAAGCTCCAGGAAGCTGCCAT +
Preference number: 6 (lower is better)
Translates to: RWDSHLSCMLAGRQV*KLNRRSQEAPGSCH
Trigger: ATGGCAGCTTCCTGGAGCTTCCTGAGACCTTCTGTTCAGCTTCAAAACCTGCCTGCCAGCAAGCATGCAAGAAAGATGACTGTCCCAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS TCA 72 bp GGTTGCCTAACAAAGAACGTTGCAGGCGTTCCATGCTaGGTCGATACTGCTTCTTGCTGGGCAGGGATCCAA +
Preference number: 6 (lower is better)
Translates to: GCLTKNVAGVPC*VDTASCWAGIQ
Trigger: TTGGATCCCTGCCCAGCAAGAAGCAGTATCGACTCAGCATGGAACGCCTGCAACGTTCTTTGTTAGGCAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS GCA 72 bp GAGTTGCCCGACGGCAGCATTCCATGCTTGGATCCTTaGCGGAATCAGAATCGGACACTGAATAAGCTGCTA +
Preference number: 6 (lower is better)
Translates to: ELPDGSIPCLDP*RNQNRTLNKLL
Trigger: TAGCAGCTTATTCAGTGTCCGATTCTGATTCCGGCAAGGATCCAAGCATGGAATGCTGCCGTCGGGCAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327883.11
ENST00000380548.9
ENST00000380566.8
ENST00000380570.8
ENST00000431052.6
CDS GCA 72 bp AGCCACTCGCTGGGACAGTCATCTTTCTTGCATGCTTaGTGGCAGGCAGGTTTTGAAGCTGAACAGAAGGTC +
Preference number: 6 (lower is better)
Translates to: SHSLGQSSFLHA*WQAGFEAEQKV
Trigger: GACCTTCTGTTCAGCTTCAAAACCTGCCTGCCAGCAAGCATGCAAGAAAGATGACTGTCCCAGCGAGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS GCA 72 bp ACGTTTGTGAGCAGCAAGGAGCCTTCGTGCAGATGGTaGGGGGAGCCCAGTTTGCTTTTATTCCTGAACCAA +
Preference number: 6 (lower is better)
Translates to: TFVSSKEPSCRW*GEPSLLLFLNQ
Trigger: TTGGTTCAGGAATAAAAGCAAACTGGGCTCCCCGCACCATCTGCACGAAGGCTCCTTGCTGCTCACAAACGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000380559.7
ENST00000388710.8
ENST00000542621.5
ENST00000680146.1
CDS GCA 72 bp ACCGCTAAGGTTTGCAACTTGAAGGATCTGTCCAGCTaGCAAGATGTGATGCGTCAGTCCTGTGGCAGTGAC +
Preference number: 6 (lower is better)
Translates to: TAKVCNLKDLSS*QDVMRQSCGSD
Trigger: GTCACTGCCACAGGACTGACGCATCACATCTTGGCAGCTGGACAGATCCTTCAAGTTGCAAACCTTAGCGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000380538.4
ENST00000380545.9
ENST00000380548.9
ENST00000380559.7
ENST00000388710.8
ENST00000542621.5
ENST00000680146.1
CDS GCA 72 bp CAAAGGTCGCCCATCTCTGTGTGTCTTACATTTGGTTaGGGAGAGCTGGGATTTATACTGCCCTCGGACCAG +
Preference number: 6 (lower is better)
Translates to: QRSPISVCLTFG*GELGFILPSDQ
Trigger: CTGGTCCGAGGGCAGTATAAATCCCAGCTCTCCGCAACCAAATGTAAGACACACAGAGATGGGCGACCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380570.8
CDS GCA 72 bp AGACTTGTCTGTGTTGCACAGCTAGGTGAGGCCCGATaGAAGGCCCATTGCACTTGGATCACTAAAGATGCC +
Preference number: 6 (lower is better)
Translates to: RLVCVAQLGEAR*KAHCTWITKDA
Trigger: GGCATCTTTAGTGATCCAAGTGCAATGGGCCTTGCATCGGGCCTCACCTAGCTGTGCAACACAGACAAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388710.8
CDS CCA 72 bp CTCTCTCAGGGCCAGGATGGAGATCATGGAAGCCCTTaGGGCATACCCTGTCATGCTTATATACACCTCTCT +
Preference number: 6 (lower is better)
Translates to: LSQGQDGDHGSP*GIPCHAYIHLS
Trigger: AGAGAGGTGTATATAAGCATGACAGGGTATGCCCCAAGGGCTTCCATGATCTCCATCCTGGCCCTGAGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS CAA 72 bp CCAAAGGTCGCCCATCTCTGTGTGTCTTACATTTGGTaGCGGAGAGCTGGGATTTATACTGCCCTCGGACCA +
Preference number: 6 (lower is better)
Translates to: PKVAHLCVSYIW*RRAGIYTALGP
Trigger: TGGTCCGAGGGCAGTATAAATCCCAGCTCTCCGCAACCAAATGTAAGACACACAGAGATGGGCGACCTTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380570.8
CDS CAA 72 bp CCAGGGCTCCTTAAATTGCCTTCTTCATTGTTGACTTaGATCTTCCCCGCAAAGCCGCCTGCTAAGGGTCCC +
Preference number: 6 (lower is better)
Translates to: PGLLKLPSSLLT*IFPAKPPAKGP
Trigger: GGGACCCTTAGCAGGCGGCTTTGCGGGGAAGATCAAAGTCAACAATGAAGAAGGCAATTTAAGGAGCCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496521.2
CDS CAA 72 bp TCCGGCCCAGGGCTCCTTAAATTGCCTTCTTCATTGTaGACTTTGATCTTCCCCGCAAAGCCGCCTGCTAAG +
Preference number: 6 (lower is better)
Translates to: SGPGLLKLPSSL*TLIFPAKPPAK
Trigger: CTTAGCAGGCGGCTTTGCGGGGAAGATCAAAGTCAACAATGAAGAAGGCAATTTAAGGAGCCCTGGGCCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496521.2
CDS CAA 72 bp TCGAATCAGTGTAAATTCCCGCAGGAAAACAGCCCCTaGGCTTTGGTCTCCGCATACCTGTCCGGCGATACA +
Preference number: 6 (lower is better)
Translates to: SNQCKFPQENSP*ALVSAYLSGDT
Trigger: TGTATCGCCGGACAGGTATGCGGAGACCAAAGCCAAGGGGCTGTTTTCCTGCGGGAATTTACACTGATTCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680146.1
CDS CAA 90 bp CCTGCAACCTGGCAGTTGATTGTCACATTCACTCCCTGCACTGTTTaGATGGTGCTTCCTATATCGACTGTGACTGCAGGCTTCTCCGTG +
Preference number: 6 (lower is better)
Translates to: PATWQLIVTFTPCTV*MVLPISTVTAGFSV
Trigger: CACGGAGAAGCCTGCAGTCACAGTCGATATAGGAAGCACCATCAAAACAGTGCAGGGAGTGAATGTGACAATCAACTGCCAGGTTGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS GCA 72 bp AGAAGCCAGGCCTCTTGGTTGCCTAACAAAGAACGTTaGAGGCGTTCCATGCTGAGTCGATACTGCTTCTTG +
Preference number: 6 (lower is better)
Translates to: RSQASWLPNKER*RRSMLSRYCFL
Trigger: CAAGAAGCAGTATCGACTCAGCATGGAACGCCTGCAACGTTCTTTGTTAGGCAACCAAGAGGCCTGGCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276935.6
CDS GCA 72 bp TGGAGATCATGGAAGCCCTTGGGGCATACCCTGTCATaGTTATATACACCTCTCTGCATACACCCATGCACC +
Preference number: 6 (lower is better)
Translates to: WRSWKPLGHTLS*LYTPLCIHPCT
Trigger: GGTGCATGGGTGTATGCAGAGAGGTGTATATAAGCATGACAGGGTATGCCCCAAGGGCTTCCATGATCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS CCA 72 bp CACTCGCTGGGACAGTCATCTTTCTTGCATGCTTGCTaGCAGGCAGGTTTTGAAGCTGAACAGAAGGTCTCA +
Preference number: 6 (lower is better)
Translates to: HSLGQSSFLHAC*QAGFEAEQKVS
Trigger: TGAGACCTTCTGTTCAGCTTCAAAACCTGCCTGCCAGCAAGCATGCAAGAAAGATGACTGTCCCAGCGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CCA 72 bp CGGCAATGGAGACAGAGTCGTATCCCAAGGCATTGGTaGCATTGCAAGTGTAGAAACCCACATCTGCTTCCA +
Preference number: 6 (lower is better)
Translates to: RQWRQSRIPRHW*HCKCRNPHLLP
Trigger: TGGAAGCAGATGTGGGTTTCTACACTTGCAATGCCACCAATGCCTTGGGATACGACTCTGTCTCCATTGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000496521.2
ENST00000680146.1
CDS CCA 72 bp AGTCCAAAGGTCGCCCATCTCTGTGTGTCTTACATTTaGTTGCGGAGAGCTGGGATTTATACTGCCCTCGGA +
Preference number: 6 (lower is better)
Translates to: SPKVAHLCVSYI*LRRAGIYTALG
Trigger: TCCGAGGGCAGTATAAATCCCAGCTCTCCGCAACCAAATGTAAGACACACAGAGATGGGCGACCTTTGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380570.8
CDS CCA 72 bp GCTGCATGGCATGCACGATCCTTGTGTAGGTCTTGTTaGAGGCTCTCAGACCATTCATCTTTCCCCTCTTTG +
Preference number: 6 (lower is better)
Translates to: AAWHARSLCRSC*RLSDHSSFPSL
Trigger: CAAAGAGGGGAAAGATGAATGGTCTGAGAGCCTCCAACAAGACCTACACAAGGATCGTGCATGCCATGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS CAA 72 bp AAGGAGCCTTCGTGCAGATGGTGCGGGGAGCCCAGTTaGCTTTTATTCCTGAACCAAGTGACTTCAGCTTCA +
Preference number: 6 (lower is better)
Translates to: KEPSCRWCGEPS*LLFLNQVTSAS
Trigger: TGAAGCTGAAGTCACTTGGTTCAGGAATAAAAGCAAACTGGGCTCCCCGCACCATCTGCACGAAGGCTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000380545.9
ENST00000380548.9
ENST00000380559.7
ENST00000388710.8
ENST00000542621.5
ENST00000680146.1
CDS CAA 72 bp TGCCTACATGGCGTCTGCCTTAGTGTTGGGAATTTATaGCTCAGTGAGGCCCAGTTGGGGAGAAAACTGCAC +
Preference number: 6 (lower is better)
Translates to: CLHGVCLSVGNL*LSEAQLGRKLH
Trigger: GTGCAGTTTTCTCCCCAACTGGGCCTCACTGAGCAATAAATTCCCAACACTAAGGCAGACGCCATGTAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS CAA 72 bp AGTGGGCTATTTGCCTACATGGCGTCTGCCTTAGTGTaGGGAATTTATTGCTCAGTGAGGCCCAGTTGGGGA +
Preference number: 6 (lower is better)
Translates to: SGLFAYMASALV*GIYCSVRPSWG
Trigger: TCCCCAACTGGGCCTCACTGAGCAATAAATTCCCAACACTAAGGCAGACGCCATGTAGGCAAATAGCCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS GCA 72 bp AAAGAAAGAAGGCACAGTTACCGGAGACCACTCCTGTaGCAGCCATTTAGGGCAGTCAAAAATGTTGCAGGG +
Preference number: 6 (lower is better)
Translates to: KERRHSYRRPLL*QPFRAVKNVAG
Trigger: CCCTGCAACATTTTTGACTGCCCTAAATGGCTGGCACAGGAGTGGTCTCCGGTAACTGTGCCTTCTTTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380566.8
CDS CCA 72 bp CAAGATGTGATGCGTCAGTCCTGTGGCAGTGACAATTaGCTGACCACCATGAAACCAGGTGATATTAGGGAC +
Preference number: 6 (lower is better)
Translates to: QDVMRQSCGSDN*LTTMKPGDIRD
Trigger: GTCCCTAATATCACCTGGTTTCATGGTGGTCAGCCAATTGTCACTGCCACAGGACTGACGCATCACATCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000380538.4
ENST00000380545.9
ENST00000380548.9
ENST00000380559.7
ENST00000388710.8
ENST00000542621.5
ENST00000680146.1
CDS CCA 72 bp GCGCTCTCTGAGCATGGTGAGCCACTGACACAAACATaGGTTAACACTACCCGAGTACAAAGATCATCCATC +
Preference number: 6 (lower is better)
Translates to: ALSEHGEPLTQT*VNTTRVQRSSI
Trigger: GATGGATGATCTTTGTACTCGGGTAGTGTTAACCCATGTTTGTGTCAGTGGCTCACCATGCTCAGAGAGCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS CAA 72 bp AGTCATCTTTCTTGCATGCTTGCTGGCAGGCAGGTTTaGAAGCTGAACAGAAGGTCTCAGGAAGCTCCAGGA +
Preference number: 6 (lower is better)
Translates to: SHLSCMLAGRQV*KLNRRSQEAPG
Trigger: TCCTGGAGCTTCCTGAGACCTTCTGTTCAGCTTCAAAACCTGCCTGCCAGCAAGCATGCAAGAAAGATGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CAA 72 bp GTGACTTCAGCTTCAGGCACTCCTGCAACCTGGCAGTaGATTGTCACATTCACTCCCTGCACTGTTTTGATG +
Preference number: 6 (lower is better)
Translates to: VTSASGTPATWQ*IVTFTPCTVLM
Trigger: CATCAAAACAGTGCAGGGAGTGAATGTGACAATCAACTGCCAGGTTGCAGGAGTGCCTGAAGCTGAAGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CAA 90 bp AAGCTTGGGTTTGGGTTTGATGTTCTCTGGGTAATAGTGACAGTATaGGTCAGCAACCACACGGTTGCTCCTCAGATCGTAGCACTCAGC +
Preference number: 6 (lower is better)
Translates to: KLGFGFDVLWVIVTV*VSNHTVAPQIVALS
Trigger: GCTGAGTGCTACGATCTGAGGAGCAACCGTGTGGTTGCTGACCAATACTGTCACTATTACCCAGAGAACATCAAACCCAAACCCAAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276935.6
ENST00000327883.11
ENST00000380548.9
ENST00000380566.8
ENST00000546040.1
ENST00000680146.1
CDS CAA 90 bp TGGGCTATTTGCCTACATGGCGTCTGCCTTAGTGTTGGGAATTTATaGCTCAGTGAGGCCCAGTTGGGGAGAAAACTGCACAGCTACATT +
Preference number: 6 (lower is better)
Translates to: WAICLHGVCLSVGNL*LSEAQLGRKLHSYI
Trigger: AATGTAGCTGTGCAGTTTTCTCCCCAACTGGGCCTCACTGAGCAATAAATTCCCAACACTAAGGCAGACGCCATGTAGGCAAATAGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS TCA 72 bp AACAACCAGGGTTGTTCCTTTGGCTTGGCACTTGAGTaGACATGGGTTGTCAGGGTCATTAGACACAGGAAG +
Preference number: 6 (lower is better)
Translates to: NNQGCSFGLALE*TWVVRVIRHRK
Trigger: CTTCCTGTGTCTAATGACCCTGACAACCCATGTTCACTCAAGTGCCAAGCCAAAGGAACAACCCTGGTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000276935.6
ENST00000327883.11
ENST00000380548.9
ENST00000380566.8
ENST00000380570.8
ENST00000431052.6
ENST00000680146.1
CDS TCA 72 bp ACACAGCAGCTCCTTCTTCTAGCTCTTGAGCTTGTTTaGACCATGGCAACTTGGCCTCGACTGGAAGTTTCT +
Preference number: 6 (lower is better)
Translates to: TQQLLLLALELV*TMATWPRLEVS
Trigger: AGAAACTTCCAGTCGAGGCCAAGTTGCCATGGTTCAAACAAGCTCAAGAGCTAGAAGAAGGAGCTGCTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276935.6
ENST00000327883.11
ENST00000380548.9
ENST00000546040.1
ENST00000680146.1
CDS CCA 72 bp GGTGCTAGTTCAACAACCAGGGTTGTTCCTTTGGCTTaGCACTTGAGTGAACATGGGTTGTCAGGGTCATTA +
Preference number: 6 (lower is better)
Translates to: GASSTTRVVPLA*HLSEHGLSGSL
Trigger: TAATGACCCTGACAACCCATGTTCACTCAAGTGCCAAGCCAAAGGAACAACCCTGGTTGTTGAACTAGCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000276935.6
ENST00000327883.11
ENST00000380548.9
ENST00000380566.8
ENST00000380570.8
ENST00000431052.6
ENST00000680146.1
CDS CAA 72 bp AAAGAAATCCGTCTCCCTCCATCGGTGGATGATGGGTaGATAGAAGATGAACTGGACTGTACTGTCAGCGGA +
Preference number: 6 (lower is better)
Translates to: KEIRLPPSVDDG*IEDELDCTVSG
Trigger: TCCGCTGACAGTACAGTCCAGTTCATCTTCTATCAACCCATCATCCACCGATGGAGGGAGACGGATTTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276935.6
ENST00000327883.11
ENST00000380548.9
ENST00000380566.8
ENST00000546040.1
ENST00000680146.1
CDS CAA 72 bp TGGCAGTTGATTGTCACATTCACTCCCTGCACTGTTTaGATGGTGCTTCCTATATCGACTGTGACTGCAGGC +
Preference number: 6 (lower is better)
Translates to: WQLIVTFTPCTV*MVLPISTVTAG
Trigger: GCCTGCAGTCACAGTCGATATAGGAAGCACCATCAAAACAGTGCAGGGAGTGAATGTGACAATCAACTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CAA 72 bp GGGACTGCTCTCTGCACTCGATGCTCTATGGGGAATTaGCAGAAGGTTCTTTGGGGTTGGAACATACTGTTT +
Preference number: 6 (lower is better)
Translates to: GTALCTRCSMGN*QKVLWGWNILF
Trigger: AAACAGTATGTTCCAACCCCAAAGAACCTTCTGCAAATTCCCCATAGAGCATCGAGTGCAGAGAGCAGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS CAA 90 bp TTAGGTGCTAGTTCAACAACCAGGGTTGTTCCTTTGGCTTGGCACTaGAGTGAACATGGGTTGTCAGGGTCATTAGACACAGGAAGCCAT +
Preference number: 6 (lower is better)
Translates to: LGASSTTRVVPLAWH*SEHGLSGSLDTGSH
Trigger: ATGGCTTCCTGTGTCTAATGACCCTGACAACCCATGTTCACTCAAGTGCCAAGCCAAAGGAACAACCCTGGTTGTTGAACTAGCACCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000276935.6
ENST00000327883.11
ENST00000380548.9
ENST00000380566.8
ENST00000380570.8
ENST00000431052.6
ENST00000680146.1
CDS CAA 90 bp TTGATGGTGCTTCCTATATCGACTGTGACTGCAGGCTTCTCCGTGTaGATCACTGTCATTCGTGACGTTTTCACTAGTGGCTTTCCTGCT +
Preference number: 6 (lower is better)
Translates to: LMVLPISTVTAGFSV*ITVIRDVFTSGFPA
Trigger: AGCAGGAAAGCCACTAGTGAAAACGTCACGAATGACAGTGATCAACACGGAGAAGCCTGCAGTCACAGTCGATATAGGAAGCACCATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380548.9
ENST00000380559.7
ENST00000680146.1
CDS CAA 90 bp ATGCCAGAGCATGAAGCCTTCTACATTTTCAGGTTCATTATCGTTTaGGTGGAGGTGTTGTTCCCTGGCTGTTTAGTGGGGCCAGACCTA +
Preference number: 6 (lower is better)
Translates to: MPEHEAFYIFRFIIV*VEVLFPGCLVGPDL
Trigger: TAGGTCTGGCCCCACTAAACAGCCAGGGAACAACACCTCCACCAAAACGATAATGAACCTGAAAATGTAGAAGGCTTCATGCTCTGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380570.8
CDS TCA 72 bp GTTGAATATTGGCGCTCTCTGAGCATGGTGAGCCACTaGCACAAACATGGGTTAACACTACCCGAGTACAAA +
Preference number: 6 (lower is better)
Translates to: VEYWRSLSMVSH*HKHGLTLPEYK
Trigger: TTTGTACTCGGGTAGTGTTAACCCATGTTTGTGTCAGTGGCTCACCATGCTCAGAGAGCGCCAATATTCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS GCA 72 bp ATCCATCCCCCAGCGTGTAAAAAGAAGTGGGCTATTTaGCTACATGGCGTCTGCCTTAGTGTTGGGAATTTA +
Preference number: 6 (lower is better)
Translates to: IHPPACKKKWAI*LHGVCLSVGNL
Trigger: TAAATTCCCAACACTAAGGCAGACGCCATGTAGGCAAATAGCCCACTTCTTTTTACACGCTGGGGGATGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS GCA 72 bp AGTCATGGGGGCAGGAATACTGTTGCTAAACAGATATaGAAGGGGGTAGCATGTGTGACTGGAGTACAGTAT +
Preference number: 6 (lower is better)
Translates to: SHGGRNTVAKQI*KGVACVTGVQY
Trigger: ATACTGTACTCCAGTCACACATGCTACCCCCTTGCATATCTGTTTAGCAACAGTATTCCTGCCCCCATGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000496521.2
CDS CCA 72 bp CGACTGGAAGTTTCTCTTTGGGTTTATAGCAGGGAGTaGGTACGATGCATTCCTCTTTTATGTGGGGCTTTG +
Preference number: 6 (lower is better)
Translates to: RLEVSLWVYSRE*VRCIPLLCGAL
Trigger: CAAAGCCCCACATAAAAGAGGAATGCATCGTACCCACTCCCTGCTATAAACCCAAAGAGAAACTTCCAGTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276935.6
ENST00000327883.11
ENST00000380548.9
ENST00000546040.1
ENST00000680146.1
CDS CCA 72 bp ACAAAGATCATCCATCCCCCAGCGTGTAAAAAGAAGTaGGCTATTTGCCTACATGGCGTCTGCCTTAGTGTT +
Preference number: 6 (lower is better)
Translates to: TKIIHPPACKKK*AICLHGVCLSV
Trigger: AACACTAAGGCAGACGCCATGTAGGCAAATAGCCCACTTCTTTTTACACGCTGGGGGATGGATGATCTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS CAA 72 bp AGTTCAACAACCAGGGTTGTTCCTTTGGCTTGGCACTaGAGTGAACATGGGTTGTCAGGGTCATTAGACACA +
Preference number: 6 (lower is better)
Translates to: SSTTRVVPLAWH*SEHGLSGSLDT
Trigger: TGTGTCTAATGACCCTGACAACCCATGTTCACTCAAGTGCCAAGCCAAAGGAACAACCCTGGTTGTTGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000276935.6
ENST00000327883.11
ENST00000380548.9
ENST00000380566.8
ENST00000380570.8
ENST00000431052.6
ENST00000680146.1
CDS CAA 72 bp CTCTACTTCCTGAAGGTGCCTGTTTTCTCTATCTTCTaGGGATTACCTCATCTCCTAGGTGATCACCTCTCC +
Preference number: 6 (lower is better)
Translates to: LYFLKVPVFSIF*GLPHLLGDHLS
Trigger: GGAGAGGTGATCACCTAGGAGATGAGGTAATCCCAAGAAGATAGAGAAAACAGGCACCTTCAGGAAGTAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS CAA 90 bp CAGGACCTTTTAAGACAAGGCGAATATGTCTACTTCCATAGGGAATaGCAACCACAGTATCATCCGATTTGGTTGCGGAGAGCTGGGATT +
Preference number: 6 (lower is better)
Translates to: QDLLRQGEYVYFHRE*QPQYHPIWLRRAGI
Trigger: AATCCCAGCTCTCCGCAACCAAATCGGATGATACTGTGGTTGCAATTCCCTATGGAAGTAGACATATTCGCCTTGTCTTAAAAGGTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276935.6
ENST00000327883.11
ENST00000380548.9
ENST00000380566.8
ENST00000680146.1
CDS CCA 72 bp TCCTACTCTTTGCCTCAAGCTTTGCCACCTTTCTCATaGGTAAGTACCTCTGATTTGGGTTCAGAGGAAGAA +
Preference number: 6 (lower is better)
Translates to: SYSLPQALPPFS*VSTSDLGSEEE
Trigger: TTCTTCCTCTGAACCCAAATCAGAGGTACTTACCCATGAGAAAGGTGGCAAAGCTTGAGGCAAAGAGTAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS CAA 72 bp TTTGGGTTTGATGTTCTCTGGGTAATAGTGACAGTATaGGTCAGCAACCACACGGTTGCTCCTCAGATCGTA +
Preference number: 6 (lower is better)
Translates to: FGFDVLWVIVTV*VSNHTVAPQIV
Trigger: TACGATCTGAGGAGCAACCGTGTGGTTGCTGACCAATACTGTCACTATTACCCAGAGAACATCAAACCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276935.6
ENST00000327883.11
ENST00000380548.9
ENST00000380566.8
ENST00000546040.1
ENST00000680146.1
CDS CAA 90 bp GCACAGCTACATTTGGTTTTTACTTCCTACTCTTTGCCTCAAGCTTaGCCACCTTTCTCATGGGTAAGTACCTCTGATTTGGGTTCAGAG +
Preference number: 6 (lower is better)
Translates to: AQLHLVFTSYSLPQA*PPFSWVSTSDLGSE
Trigger: CTCTGAACCCAAATCAGAGGTACTTACCCATGAGAAAGGTGGCAAAGCTTGAGGCAAAGAGTAGGAAGTAAAAACCAAATGTAGCTGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS CCA 72 bp CGAGTTACGAATCTTGACAATGAAATCTGCTGTGAGTaGTCCAGCCATTCTCAGTATCTCTTTGTCTGGAAA +
Preference number: 6 (lower is better)
Translates to: RVTNLDNEICCE*SSHSQYLFVWK
Trigger: TTTCCAGACAAAGAGATACTGAGAATGGCTGGACCACTCACAGCAGATTTCATTGTCAAGATTCGTAACTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276935.6
ENST00000327883.11
ENST00000380548.9
ENST00000380566.8
ENST00000680146.1
CDS CAA 72 bp TTAAGACAAGGCGAATATGTCTACTTCCATAGGGAATaGCAACCACAGTATCATCCGATTTGGTTGCGGAGA +
Preference number: 6 (lower is better)
Translates to: LRQGEYVYFHRE*QPQYHPIWLRR
Trigger: TCTCCGCAACCAAATCGGATGATACTGTGGTTGCAATTCCCTATGGAAGTAGACATATTCGCCTTGTCTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276935.6
ENST00000327883.11
ENST00000380548.9
ENST00000380566.8
ENST00000680146.1
CDS CAA 72 bp CATTTGGTTTTTACTTCCTACTCTTTGCCTCAAGCTTaGCCACCTTTCTCATGGGTAAGTACCTCTGATTTG +
Preference number: 6 (lower is better)
Translates to: HLVFTSYSLPQA*PPFSWVSTSDL
Trigger: CAAATCAGAGGTACTTACCCATGAGAAAGGTGGCAAAGCTTGAGGCAAAGAGTAGGAAGTAAAAACCAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489062.2
CDS TCA 72 bp ATGAGAACAAATCAGCACTTACTTGGCATAAACCACTaGTGCACATATCCAAAGATTCTGTATAGCAACGCG +
Preference number: 6 (lower is better)
Translates to: MRTNQHLLGINH*CTYPKILYSNA
Trigger: CGCGTTGCTATACAGAATCTTTGGATATGTGCATCAGTGGTTTATGCCAAGTAAGTGCTGATTTGTTCTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431052.6
CDS TCA 72 bp CATTTACACAAAGACATTGAAACCCTCTGGACAAGTTaGATGAGAACAAATCAGCACTTACTTGGCATAAAC +
Preference number: 6 (lower is better)
Translates to: HLHKDIETLWTS*MRTNQHLLGIN
Trigger: GTTTATGCCAAGTAAGTGCTGATTTGTTCTCATTCAACTTGTCCAGAGGGTTTCAATGTCTTTGTGTAAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431052.6