RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADAMTS6 (Homo sapiens)

Ensembl gene IDs: ENSG00000049192

Ensembl transcript IDs: ENST00000381052.8, ENST00000381055.8, ENST00000417396.2, ENST00000464680.6, ENST00000470597.5, ENST00000502886.1

Found 636 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AACCACTGTAGTCCAGCGTCTCCTCCTCAGAAGGTCCGATCTTCCTaGTGCAGAGCACTGCCCTTGTGCGCATCCCACCATCACAAGTCT +
Preference number: 1 (lower is better)
Translates to: NHCSPASPPQKVRSS*CRALPLCASHHHKS
Trigger: AGACTTGTGATGGTGGGATGCGCACAAGGGCAGTGCTCTGCATCAGGAAGATCGGACCTTCTGAGGAGGAGACGCTGGACTACAGTGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR GCA 90 bp CAGCGTCTCCTCCTCAGAAGGTCCGATCTTCCTGATGCAGAGCACTaGCCTTGTGCGCATCCCACCATCACAAGTCTTGCTGCATTCCAA +
Preference number: 1 (lower is better)
Translates to: QRLLLRRSDLPDAEH*PCAHPTITSLAAFQ
Trigger: TTGGAATGCAGCAAGACTTGTGATGGTGGGATGCGCACAAGGGCAGTGCTCTGCATCAGGAAGATCGGACCTTCTGAGGAGGAGACGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR CCA 90 bp GCGGCCCAAACTGCAGCGGATGCGGACAGGAGGTTTGCTTTCCTCTaGACATTGTGCAGCTGGGAATGTCTTAGAAAGGTCACTGCTCTT +
Preference number: 1 (lower is better)
Translates to: AAQTAADADRRFAFL*TLCSWECLRKVTAL
Trigger: AAGAGCAGTGACCTTTCTAAGACATTCCCAGCTGCACAATGTCCAGAGGAAAGCAAACCTCCTGTCCGCATCCGCTGCAGTTTGGGCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR CCA 90 bp ATGGGCTGTTTGCCCTTCACTGAATGGCTAAGACGGCACTTGGGCTaGTCTTCTAAGGGCATCTTAGATCCGGGCCCTGGTGATTCCTCT +
Preference number: 1 (lower is better)
Translates to: MGCLPFTEWLRRHLG*SSKGILDPGPGDSS
Trigger: AGAGGAATCACCAGGGCCCGGATCTAAGATGCCCTTAGAAGACCAGCCCAAGTGCCGTCTTAGCCATTCAGTGAAGGGCAAACAGCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR TCA 90 bp ATCACAGCCTACGTGCTTGCATTCTCCATTGATGCAGATATCCAGTaGATCCGCATTGCACTGGGTCCCATCGATCACCGCAGGAGCACG +
Preference number: 1 (lower is better)
Translates to: ITAYVLAFSIDADIQ*IRIALGPIDHRRST
Trigger: CGTGCTCCTGCGGTGATCGATGGGACCCAGTGCAATGCGGATTCACTGGATATCTGCATCAATGGAGAATGCAAGCACGTAGGCTGTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR GCA 90 bp CAGACCAGTCCAAAGCCACCCACTGTGGTGGACATGACTGGTTGTTaGAGGGCTCTTTTTCGACAGGCCGGTGTGTTAAACAACCACTGT +
Preference number: 1 (lower is better)
Translates to: QTSPKPPTVVDMTGC*RALFRQAGVLNNHC
Trigger: ACAGTGGTTGTTTAACACACCGGCCTGTCGAAAAAGAGCCCTGCAACAACCAGTCATGTCCACCACAGTGGGTGGCTTTGGACTGGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR CCA 90 bp AGTGCTCGGGCCATACTACCCATGGGCTGTTTGCCCTTCACTGAATaGCTAAGACGGCACTTGGGCTGGTCTTCTAAGGGCATCTTAGAT +
Preference number: 1 (lower is better)
Translates to: SARAILPMGCLPFTE*LRRHLGWSSKGILD
Trigger: ATCTAAGATGCCCTTAGAAGACCAGCCCAAGTGCCGTCTTAGCCATTCAGTGAAGGGCAAACAGCCCATGGGTAGTATGGCCCGAGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR TCA 90 bp AAAGTCACGCTTGGGAGGCTCATTATCAAGGCAAGTACCACGGCCTaGACTGCAAAGCCGTCGCCGGAAAACATCAGAAGCTGGCATAAC +
Preference number: 1 (lower is better)
Translates to: KVTLGRLIIKASTTA*TAKPSPENIRSWHN
Trigger: GTTATGCCAGCTTCTGATGTTTTCCGGCGACGGCTTTGCAGTTCAGGCCGTGGTACTTGCCTTGATAATGAGCCTCCCAAGCGTGACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR GCA 90 bp ACTGCAGCGGATGCGGACAGGAGGTTTGCTTTCCTCTGGACATTGTaGAGCTGGGAATGTCTTAGAAAGGTCACTGCTCTTGCACAGAAC +
Preference number: 1 (lower is better)
Translates to: TAADADRRFAFLWTL*SWECLRKVTALAQN
Trigger: GTTCTGTGCAAGAGCAGTGACCTTTCTAAGACATTCCCAGCTGCACAATGTCCAGAGGAAAGCAAACCTCCTGTCCGCATCCGCTGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR CCA 90 bp CATACACCTGACCTGGGGCCACAGCTGGATAAAGAAAGTCACGCTTaGGAGGCTCATTATCAAGGCAAGTACCACGGCCTGAACTGCAAA +
Preference number: 1 (lower is better)
Translates to: HTPDLGPQLDKESHA*EAHYQGKYHGLNCK
Trigger: TTTGCAGTTCAGGCCGTGGTACTTGCCTTGATAATGAGCCTCCCAAGCGTGACTTTCTTTATCCAGCTGTGGCCCCAGGTCAGGTGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR CCA 90 bp GTACACTCAGACCAGTCCAAAGCCACCCACTGTGGTGGACATGACTaGTTGTTGCAGGGCTCTTTTTCGACAGGCCGGTGTGTTAAACAA +
Preference number: 1 (lower is better)
Translates to: VHSDQSKATHCGGHD*LLQGSFSTGRCVKQ
Trigger: TTGTTTAACACACCGGCCTGTCGAAAAAGAGCCCTGCAACAACCAGTCATGTCCACCACAGTGGGTGGCTTTGGACTGGTCTGAGTGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR CCA 90 bp TTCAAGGCTTACTTGAAACTGTTTCATCCTGTTACATTCTGTGCGTaGCTCCCTCTAGAAAGGCACTCTGATGCTGCCCCGGGGGATGCC +
Preference number: 1 (lower is better)
Translates to: FKAYLKLFHPVTFCA*LPLERHSDAAPGDA
Trigger: GGCATCCCCCGGGGCAGCATCAGAGTGCCTTTCTAGAGGGAGCCACGCACAGAATGTAACAGGATGAAACAGTTTCAAGTAAGCCTTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR TCA 90 bp AAAGGGCAGAAGCCGTGCTGTGGCTGGGGAGGATGTAAACACAAGTaGGTTGGAGGGACTCAAATAAGAACTAAGGCATCCTGTGTGGTG +
Preference number: 1 (lower is better)
Translates to: KGQKPCCGWGGCKHK*VGGTQIRTKASCVV
Trigger: CACCACACAGGATGCCTTAGTTCTTATTTGAGTCCCTCCAACTCACTTGTGTTTACATCCTCCCCAGCCACAGCACGGCTTCTGCCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR CCA 90 bp TCCCAGTGGCAGATACTGCTCCCAGGTGTAGGGTACCAGTTTCCCTaGGGTTCCCTAAGTAGTCTATGTAGCTCACTACTTTTGGAAGGT +
Preference number: 1 (lower is better)
Translates to: SQWQILLPGVGYQFP*GSLSSLCSSLLLEG
Trigger: ACCTTCCAAAAGTAGTGAGCTACATAGACTACTTAGGGAACCCCAGGGAAACTGGTACCCTACACCTGGGAGCAGTATCTGCCACTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR GCA 90 bp GGGTCAGTGTCCTTGGCAGGTCTTACAACACATCTGTCTGAAGTATaGTCGACTGCAGAACTTGAACTTCAGCACCAGTGGGCAATAAGC +
Preference number: 1 (lower is better)
Translates to: GSVSLAGLTTHLSEV*STAELELQHQWAIS
Trigger: GCTTATTGCCCACTGGTGCTGAAGTTCAAGTTCTGCAGTCGAGCATACTTCAGACAGATGTGTTGTAAGACCTGCCAAGGACACTGACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR CCA 90 bp ACGACATTGCTCATCAGCATCATACACCTGACCTGGGGCCACAGCTaGATAAAGAAAGTCACGCTTGGGAGGCTCATTATCAAGGCAAGT +
Preference number: 1 (lower is better)
Translates to: TTLLISIIHLTWGHS*IKKVTLGRLIIKAS
Trigger: ACTTGCCTTGATAATGAGCCTCCCAAGCGTGACTTTCTTTATCCAGCTGTGGCCCCAGGTCAGGTGTATGATGCTGATGAGCAATGTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR CCA 90 bp GAAATGACAAGGCACTCTCTCTGGCTTTCTGTGGGTCAGTGTCCTTaGCAGGTCTTACAACACATCTGTCTGAAGTATGCTCGACTGCAG +
Preference number: 1 (lower is better)
Translates to: EMTRHSLWLSVGQCP*QVLQHICLKYARLQ
Trigger: CTGCAGTCGAGCATACTTCAGACAGATGTGTTGTAAGACCTGCCAAGGACACTGACCCACAGAAAGCCAGAGAGAGTGCCTTGTCATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR CCA 90 bp AGAACTAAGGCATCCTGTGTGGTGGCAGCAAAGGGCCTGGTCCTTTaGTCTGTACCATACCCCAGGTCTGGTTTCTGCATGAAATTGAAA +
Preference number: 1 (lower is better)
Translates to: RTKASCVVAAKGLVL*SVPYPRSGFCMKLK
Trigger: TTTCAATTTCATGCAGAAACCAGACCTGGGGTATGGTACAGACCAAAGGACCAGGCCCTTTGCTGCCACCACACAGGATGCCTTAGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR CCA 90 bp AGAAAGGTCACTGCTCTTGCACAGAACAATCCGATGCTTGAATCCTaGACCACATTTTGGAGTACACTCAGACCAGTCCAAAGCCACCCA +
Preference number: 1 (lower is better)
Translates to: RKVTALAQNNPMLES*TTFWSTLRPVQSHP
Trigger: TGGGTGGCTTTGGACTGGTCTGAGTGTACTCCAAAATGTGGTCCAGGATTCAAGCATCGGATTGTTCTGTGCAAGAGCAGTGACCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR CCA 90 bp CTGCAAAAGGGTCTGCCTGGTTACCGAGCCAGTCTATCTTTTGCATaGTATCATCTCAGTAAGCTCAACACACGTGCAGCAATCCAAAGG +
Preference number: 1 (lower is better)
Translates to: LQKGLPGYRASLSFA*YHLSKLNTRAAIQR
Trigger: CCTTTGGATTGCTGCACGTGTGTTGAGCTTACTGAGATGATACCATGCAAAAGATAGACTGGCTCGGTAACCAGGCAGACCCTTTTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR GCA 90 bp GGGAATGTCTTAGAAAGGTCACTGCTCTTGCACAGAACAATCCGATaGTTGAATCCTGGACCACATTTTGGAGTACACTCAGACCAGTCC +
Preference number: 1 (lower is better)
Translates to: GNVLERSLLLHRTIR*LNPGPHFGVHSDQS
Trigger: GGACTGGTCTGAGTGTACTCCAAAATGTGGTCCAGGATTCAAGCATCGGATTGTTCTGTGCAAGAGCAGTGACCTTTCTAAGACATTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR CCA 90 bp AAAGAACACAAACGCTCCACAGTAAGCAAGTCTCCCTGTGTTGTTTaGATCTCTCCAATCTGGCATTCCCTCCTAATACCGTGTCCAGCA +
Preference number: 1 (lower is better)
Translates to: KEHKRSTVSKSPCVV*ISPIWHSLLIPCPA
Trigger: TGCTGGACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAACAACACAGGGAGACTTGCTTACTGTGGAGCGTTTGTGTTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR CCA 90 bp TTGGTGCATGCATGGTGTACACCTGTGTACAATGGGGAGGCATTTTaGACACAAAGCACATTCATCAAGAACCTGCTGCAAGCTACACGT +
Preference number: 1 (lower is better)
Translates to: LVHAWCTPVYNGEAF*TQSTFIKNLLQATR
Trigger: ACGTGTAGCTTGCAGCAGGTTCTTGATGAATGTGCTTTGTGTCCAAAATGCCTCCCCATTGTACACAGGTGTACACCATGCATGCACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR TCA 90 bp TGCATTTGCAAGGACATCAATCCTCTTCCTCTGGGTGGCTCTCTTTaGTGGATGCATTTCCATGATGAAATGACAAGGCACTCTCTCTGG +
Preference number: 1 (lower is better)
Translates to: CICKDINPLPLGGSL*WMHFHDEMTRHSLW
Trigger: CCAGAGAGAGTGCCTTGTCATTTCATCATGGAAATGCATCCATCAAAGAGAGCCACCCAGAGGAAGAGGATTGATGTCCTTGCAAATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR TCA 90 bp AGCTCACTACTTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTaGCAATGCTATTGTTATTATTTAGGAATAGGGCATCATGTAGCC +
Preference number: 1 (lower is better)
Translates to: SSLLLEGLPWWPSLH*QCYCYYLGIGHHVA
Trigger: GGCTACATGATGCCCTATTCCTAAATAATAACAATAGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAAGTAGTGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR GCA 90 bp TCAGTATTAGAAATGGGGGTACTGTCACATTTGCTTTCACACTGCTaGATTGATGGAGGCCGAACAGTTTCTAGACAGTCACTAGATGCC +
Preference number: 1 (lower is better)
Translates to: SVLEMGVLSHLLSHC*IDGGRTVSRQSLDA
Trigger: GGCATCTAGTGACTGTCTAGAAACTGTTCGGCCTCCATCAATGCAGCAGTGTGAAAGCAAATGTGACAGTACCCCCATTTCTAATACTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR CCA 90 bp TCCACAGTAAGCAAGTCTCCCTGTGTTGTTTGGATCTCTCCAATCTaGCATTCCCTCCTAATACCGTGTCCAGCACTTTGGATCAATAAA +
Preference number: 1 (lower is better)
Translates to: STVSKSPCVVWISPI*HSLLIPCPALWINK
Trigger: TTTATTGATCCAAAGTGCTGGACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAACAACACAGGGAGACTTGCTTACTGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR GCA 90 bp GCAAGCAGACCAGGAAAAAGGATTGGTATTCGCAGTAATGTGAGCTaGCATAAGTTTTGCTGCTTCATGACCTTTCGTCCCACAAGAATT +
Preference number: 1 (lower is better)
Translates to: ASRPGKRIGIRSNVS*HKFCCFMTFRPTRI
Trigger: AATTCTTGTGGGACGAAAGGTCATGAAGCAGCAAAACTTATGGCAGCTCACATTACTGCGAATACCAATCCTTTTTCCTGGTCTGCTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR CCA 90 bp TTTCAGGTGGCTTACTGTCAGGATCACAGTAATTGTTCTGGACAATaGAGTTGTCATCCAACCTTTTACAGACCACCTCCTGTCTTTGGA +
Preference number: 1 (lower is better)
Translates to: FQVAYCQDHSNCSGQ*SCHPTFYRPPPVFG
Trigger: TCCAAAGACAGGAGGTGGTCTGTAAAAGGTTGGATGACAACTCCATTGTCCAGAACAATTACTGTGATCCTGACAGTAAGCCACCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR GCA 90 bp TTTCCAGTTATAATACTTTCCTCGGAAAGGCATATTGTCAAAGTCTaGACACTGTTTCTCTCGAAAATCTCGGGAACCCAAAGGGCATGG +
Preference number: 1 (lower is better)
Translates to: FPVIILSSERHIVKV*TLFLSKISGTQRAW
Trigger: CCATGCCCTTTGGGTTCCCGAGATTTTCGAGAGAAACAGTGTGCAGACTTTGACAATATGCCTTTCCGAGGAAAGTATTATAACTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR GCA 90 bp TCTTCAGTATTAGAAATGGGGGTACTGTCACATTTGCTTTCACACTaGTGCATTGATGGAGGCCGAACAGTTTCTAGACAGTCACTAGAT +
Preference number: 1 (lower is better)
Translates to: SSVLEMGVLSHLLSH*CIDGGRTVSRQSLD
Trigger: ATCTAGTGACTGTCTAGAAACTGTTCGGCCTCCATCAATGCAGCAGTGTGAAAGCAAATGTGACAGTACCCCCATTTCTAATACTGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR GCA 90 bp GGAAAAAGGATTGGTATTCGCAGTAATGTGAGCTGCCATAAGTTTTaGTGCTTCATGACCTTTCGTCCCACAAGAATTTCCAATTCCATC +
Preference number: 1 (lower is better)
Translates to: GKRIGIRSNVSCHKF*CFMTFRPTRISNSI
Trigger: GATGGAATTGGAAATTCTTGTGGGACGAAAGGTCATGAAGCAGCAAAACTTATGGCAGCTCACATTACTGCGAATACCAATCCTTTTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR CCA 90 bp TCTAGTAATAAGAACTGCATTATCGTGGTGGGCAATCCCATTTTCTaGAATGGTGTTTCCATCACTTTGGTGGGAGAGAATGGATTTCTG +
Preference number: 1 (lower is better)
Translates to: SSNKNCIIVVGNPIF*NGVSITLVGENGFL
Trigger: CAGAAATCCATTCTCTCCCACCAAAGTGATGGAAACACCATTCCAGAAAATGGGATTGCCCACCACGATAATGCAGTTCTTATTACTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR GCA 90 bp AAAAGGATTGGTATTCGCAGTAATGTGAGCTGCCATAAGTTTTGCTaGTTCATGACCTTTCGTCCCACAAGAATTTCCAATTCCATCATG +
Preference number: 1 (lower is better)
Translates to: KRIGIRSNVSCHKFC*FMTFRPTRISNSIM
Trigger: CATGATGGAATTGGAAATTCTTGTGGGACGAAAGGTCATGAAGCAGCAAAACTTATGGCAGCTCACATTACTGCGAATACCAATCCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR CCA 90 bp AAGCTCAACACACGTGCAGCAATCCAAAGGGCAGAAGCCGTGCTGTGGCTGGGGCTAAGGCATCCTGTGTaGTGGCAGCAAAGGGCCTGG +
Preference number: 2 (lower is better)
Translates to: KLNTRAAIQRAEAVLWLGLRHPV*WQQRAW
Trigger: CCAGGCCCTTTGCTGCCACCACACAGGATGCCTTAG...CCCCAGCCACAGCACGGCTTCTGCCCTTTGGATTGCTGCACGTGTGTTGAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR CAA 90 bp GGAGGAGGGCAGCGGCCCAAACTGCAGCGGATGCGGACAGGAGGTTaGCTTTCCTCTGGACATTGTGCAGCTGGGAATGTCTTAGAAAGG +
Preference number: 2 (lower is better)
Translates to: GGGQRPKLQRMRTGG*LSSGHCAAGNVLER
Trigger: CCTTTCTAAGACATTCCCAGCTGCACAATGTCCAGAGGAAAGCAAACCTCCTGTCCGCATCCGCTGCAGTTTGGGCCGCTGCCCTCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR TCA 90 bp GTGGCAGCAAAGGGCCTGGTCCTTTGGTCTGTACCATACCCCAGGTCTGGTTTCTCAGCATCATACACCTaGCCTGGGGCCACAGCTGGA +
Preference number: 2 (lower is better)
Translates to: VAAKGLVLWSVPYPRSGFSASYT*PGATAG
Trigger: TCCAGCTGTGGCCCCAGGTCAGGTGTATGATGCTGA...GAAACCAGACCTGGGGTATGGTACAGACCAAAGGACCAGGCCCTTTGCTGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR TCA 90 bp AAGCTCAACACACGTGCAGCAATCCAAAGGGCAGAAGCCGTGCTGTGGCTGGGGGCCTCCCCTGGGCAGTaGATCATTGAAGAACCCTTC +
Preference number: 2 (lower is better)
Translates to: KLNTRAAIQRAEAVLWLGASPGQ*IIEEPF
Trigger: GAAGGGTTCTTCAATGATTCACTGCCCAGGGGAGGC...CCCCAGCCACAGCACGGCTTCTGCCCTTTGGATTGCTGCACGTGTGTTGAGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR CCA 90 bp AAGCTCAACACACGTGCAGCAATCCAAAGGGCAGAAGCCGTGCTGTGGCTGGGGAAGGGCCTGGTCCTTTaGTCTGTACCATACCCCAGG +
Preference number: 2 (lower is better)
Translates to: KLNTRAAIQRAEAVLWLGKGLVL*SVPYPR
Trigger: CCTGGGGTATGGTACAGACCAAAGGACCAGGCCCTT...CCCCAGCCACAGCACGGCTTCTGCCCTTTGGATTGCTGCACGTGTGTTGAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR CAA 90 bp GGCGCAAGGGAATTCAGTGCTCGGGCCATACTACCCATGGGCTGTTaGCCCTTCACTGAATGGCTAAGACGGCACTTGGGCTGGTCTTCT +
Preference number: 2 (lower is better)
Translates to: GAREFSARAILPMGC*PFTEWLRRHLGWSS
Trigger: AGAAGACCAGCCCAAGTGCCGTCTTAGCCATTCAGTGAAGGGCAAACAGCCCATGGGTAGTATGGCCCGAGCACTGAATTCCCTTGCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR CAA 90 bp CTACCCATGGGCTGTTTGCCCTTCACTGAATGGCTAAGACGGCACTaGGGCTGGTCTTCTAAGGGCATCTTAGATCCGGGCCCTGGTGAT +
Preference number: 2 (lower is better)
Translates to: LPMGCLPFTEWLRRH*GWSSKGILDPGPGD
Trigger: ATCACCAGGGCCCGGATCTAAGATGCCCTTAGAAGACCAGCCCAAGTGCCGTCTTAGCCATTCAGTGAAGGGCAAACAGCCCATGGGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR-3UTR TCA 90 bp GCTCACTACTTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTCTCGACTGCAGAACTTaGACTTCAGCACCAGTGGGC +
Preference number: 2 (lower is better)
Translates to: AHYFWKVCHGGPASTDNALDCRT*TSAPVG
Trigger: GCCCACTGGTGCTGAAGTTCAAGTTCTGCAGTCGAG...AGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAAGTAGTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR GCA 90 bp TTCTGTGCGTGGCTCCCTCTAGAAAGGCACTCTGATGCTGCCCCGGGGGATGCCTTCCTCTGGACATTGTaGAGCTGGGAATGTCTTAGA +
Preference number: 2 (lower is better)
Translates to: FCAWLPLERHSDAAPGDAFLWTL*SWECLR
Trigger: TCTAAGACATTCCCAGCTGCACAATGTCCAGAGGAA...GGCATCCCCCGGGGCAGCATCAGAGTGCCTTTCTAGAGGGAGCCACGCACAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR GCA 90 bp TTTAGTAGGACTTTATCCCAGTGGCAGATACTGCTCCCAGGTGTAGGGTACCAGTCAGCCAAGGTGCTGTaGAGTGCCTGGGGGATGGCC +
Preference number: 2 (lower is better)
Translates to: FSRTLSQWQILLPGVGYQSAKVL*SAWGMA
Trigger: GGCCATCCCCCAGGCACTGCACAGCACCTTGGCTGA...CTGGTACCCTACACCTGGGAGCAGTATCTGCCACTGGGATAAAGTCCTACTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR-3UTR GCA 90 bp TTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTATTGTTATTCCCCGCAGGTCCTGCTaGACTCTCCCCATAGTGACC +
Preference number: 2 (lower is better)
Translates to: FWKVCHGGPASTDNAIVIPRRSC*TLPIVT
Trigger: GGTCACTATGGGGAGAGTGCAGCAGGACCTGCGGGG...AATAACAATAGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR GCA 90 bp ACAAACTGCAAAAGGGTCTGCCTGGTTACCGAGCCAGTCTATCTTTTGCATGGTCTCCCCCGCAGGTCCTaGTGCACTCTCCCCATAGTG +
Preference number: 2 (lower is better)
Translates to: TNCKRVCLVTEPVYLLHGLPRRS*CTLPIV
Trigger: CACTATGGGGAGAGTGCAGCAGGACCTGCGGGGGAG...ACCATGCAAAAGATAGACTGGCTCGGTAACCAGGCAGACCCTTTTGCAGTTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR CCA 90 bp TTCTGTGCGTGGCTCCCTCTAGAAAGGCACTCTGATGCTGCCCCGGGGGATGCCAGGGACTTGTCTGCATaGTGGTTTATCTCCAAGTTT +
Preference number: 2 (lower is better)
Translates to: FCAWLPLERHSDAAPGDARDLSA*WFISKF
Trigger: AAACTTGGAGATAAACCACCATGCAGACAAGTCCCT...GGCATCCCCCGGGGCAGCATCAGAGTGCCTTTCTAGAGGGAGCCACGCACAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR CAA 90 bp TCAGACCAGTCCAAAGCCACCCACTGTGGTGGACATGACTGGTTGTaGCAGGGCTCTTTTTCGACAGGCCGGTGTGTTAAACAACCACTG +
Preference number: 2 (lower is better)
Translates to: SDQSKATHCGGHDWL*QGSFSTGRCVKQPL
Trigger: CAGTGGTTGTTTAACACACCGGCCTGTCGAAAAAGAGCCCTGCAACAACCAGTCATGTCCACCACAGTGGGTGGCTTTGGACTGGTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR CAA 90 bp CACTCAGACCAGTCCAAAGCCACCCACTGTGGTGGACATGACTGGTaGTTGCAGGGCTCTTTTTCGACAGGCCGGTGTGTTAAACAACCA +
Preference number: 2 (lower is better)
Translates to: HSDQSKATHCGGHDW*LQGSFSTGRCVKQP
Trigger: TGGTTGTTTAACACACCGGCCTGTCGAAAAAGAGCCCTGCAACAACCAGTCATGTCCACCACAGTGGGTGGCTTTGGACTGGTCTGAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR TCA 90 bp ACTGTAGTCCAGCGTCTCCTCCTCAGAAGGTCCGATCTTCCTGATGCAGAGCACGATGCAGATATCCAGTaGATCCGCATTGCACTGGGT +
Preference number: 2 (lower is better)
Translates to: TVVQRLLLRRSDLPDAEHDADIQ*IRIALG
Trigger: ACCCAGTGCAATGCGGATTCACTGGATATCTGCATC...GTGCTCTGCATCAGGAAGATCGGACCTTCTGAGGAGGAGACGCTGGACTACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR TCA 90 bp GTGGCAGCAAAGGGCCTGGTCCTTTGGTCTGTACCATACCCCAGGTCTGGTTTCCTGGGTGGCTCTCTTTaGTGGATGCATTTCCATGAT +
Preference number: 2 (lower is better)
Translates to: VAAKGLVLWSVPYPRSGFLGGSL*WMHFHD
Trigger: ATCATGGAAATGCATCCATCAAAGAGAGCCACCCAG...GAAACCAGACCTGGGGTATGGTACAGACCAAAGGACCAGGCCCTTTGCTGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR-3UTR GCA 90 bp GCTCACTACTTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTTGCTCTGGGGCCAAGTaGCAAAAGGAACACAATCTC +
Preference number: 2 (lower is better)
Translates to: AHYFWKVCHGGPASTDNACSGAK*QKEHNL
Trigger: GAGATTGTGTTCCTTTTGGCACTTGGCCCCAGAGCA...AGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAAGTAGTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR GCA 90 bp ACTGTAGTCCAGCGTCTCCTCCTCAGAAGGTCCGATCTTCCTGATGCAGAGCACGGCAGGGCTCAGTGTTaGAGGCTCTTTGATTTTCAG +
Preference number: 2 (lower is better)
Translates to: TVVQRLLLRRSDLPDAEHGRAQC*RLFDFQ
Trigger: CTGAAAATCAAAGAGCCTGCAACACTGAGCCCTGCC...GTGCTCTGCATCAGGAAGATCGGACCTTCTGAGGAGGAGACGCTGGACTACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR CCA 90 bp GCTCACTACTTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTACCACCTCCTGTCTTTaGACACCTCCAGCACAAGTA +
Preference number: 2 (lower is better)
Translates to: AHYFWKVCHGGPASTDNATTSCL*TPPAQV
Trigger: TACTTGTGCTGGAGGTGTCCAAAGACAGGAGGTGGT...AGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAAGTAGTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR TCA 90 bp ACTGTAGTCCAGCGTCTCCTCCTCAGAAGGTCCGATCTTCCTGATGCAGAGCACTGCAATGGTAAAAGCTaGACCCAGGCCAATGTCTTC +
Preference number: 2 (lower is better)
Translates to: TVVQRLLLRRSDLPDAEHCNGKS*TQANVF
Trigger: GAAGACATTGGCCTGGGTTCAGCTTTTACCATTGCA...GTGCTCTGCATCAGGAAGATCGGACCTTCTGAGGAGGAGACGCTGGACTACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR GCA 90 bp CACATTTGCTTTCACACTGCTGCATTGATGGAGGCCGAACAGTTTCTAGACAGTCCTGATGCAGAGCACTaGCCTTGTGCGCATCCCACC +
Preference number: 2 (lower is better)
Translates to: HICFHTAALMEAEQFLDSPDAEH*PCAHPT
Trigger: GGTGGGATGCGCACAAGGGCAGTGCTCTGCATCAGG...ACTGTCTAGAAACTGTTCGGCCTCCATCAATGCAGCAGTGTGAAAGCAAATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR CCA 90 bp ACAACCACTGTAGTCCAGCGTCTCCTCCTCAGAAGGTCCGATCTTCCTGATGCAACCTGGGGCCACAGCTaGATAAAGAAAGTCACGCTT +
Preference number: 2 (lower is better)
Translates to: TTTVVQRLLLRRSDLPDATWGHS*IKKVTL
Trigger: AAGCGTGACTTTCTTTATCCAGCTGTGGCCCCAGGT...TGCATCAGGAAGATCGGACCTTCTGAGGAGGAGACGCTGGACTACAGTGGTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR CCA 90 bp CTAAGGCATCCTGTGTGGTGGCAGCAAAGGGCCTGGTCCTTTGGTCTGTACCATCACCCATATTTACATTaGCGGGAGGTTGCTCCATAC +
Preference number: 2 (lower is better)
Translates to: LRHPVWWQQRAWSFGLYHHPYLH*REVAPY
Trigger: GTATGGAGCAACCTCCCGCCAATGTAAATATGGGTG...ATGGTACAGACCAAAGGACCAGGCCCTTTGCTGCCACCACACAGGATGCCTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR CAA 90 bp CCCATATTTACATTGGCGGGAGGTTGCTCCATACTGGAAACGACATaGCTCATCAGCATCATACACCTGACCTGGGGCCACAGCTGGATA +
Preference number: 2 (lower is better)
Translates to: PIFTLAGGCSILETT*LISIIHLTWGHSWI
Trigger: TATCCAGCTGTGGCCCCAGGTCAGGTGTATGATGCTGATGAGCAATGTCGTTTCCAGTATGGAGCAACCTCCCGCCAATGTAAATATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR CAA 90 bp GTCCCCTCAGCTGCTGGAATACTGTTGGTGACACAGCGGTTGCTTTaGCTGAGACACCAGAGCTCTCTACACACCCATATTTACATTGGC +
Preference number: 2 (lower is better)
Translates to: VPSAAGILLVTQRLL*LRHQSSLHTHIYIG
Trigger: GCCAATGTAAATATGGGTGTGTAGAGAGCTCTGGTGTCTCAGCAAAAGCAACCGCTGTGTCACCAACAGTATTCCAGCAGCTGAGGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR CAA 90 bp CACAGTGTCCCCTCAGCTGCTGGAATACTGTTGGTGACACAGCGGTaGCTTTTGCTGAGACACCAGAGCTCTCTACACACCCATATTTAC +
Preference number: 2 (lower is better)
Translates to: HSVPSAAGILLVTQR*LLLRHQSSLHTHIY
Trigger: GTAAATATGGGTGTGTAGAGAGCTCTGGTGTCTCAGCAAAAGCAACCGCTGTGTCACCAACAGTATTCCAGCAGCTGAGGGGACACTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR TCA 90 bp CGGGCCATACTACCCATGGGCTGTTTGCCCTTCACTGAATGGCTAAGACGGCACTCTCTAACTTCAATGTaGACAGAGCCTCTTGGTATC +
Preference number: 2 (lower is better)
Translates to: RAILPMGCLPFTEWLRRHSLTSM*TEPLGI
Trigger: GATACCAAGAGGCTCTGTTCACATTGAAGTTAGAGA...GTGCCGTCTTAGCCATTCAGTGAAGGGCAAACAGCCCATGGGTAGTATGGCCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR TCA 90 bp GCTCACTACTTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTCCAGGATGTGAAACTTaGAGATGGGGAAAATACGAG +
Preference number: 2 (lower is better)
Translates to: AHYFWKVCHGGPASTDNAPGCET*RWGKYE
Trigger: CTCGTATTTTCCCCATCTTCAAGTTTCACATCCTGG...AGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAAGTAGTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR-3UTR GCA 90 bp CCCTGTGTTGTTTGGATCTCTCCAATCTGGCATTCCCTCCTAATACCGTGTCCACAATGGCATCACATGTaGTTCCGTCCCCTCCACAGA +
Preference number: 2 (lower is better)
Translates to: PCVVWISPIWHSLLIPCPQWHHM*FRPLHR
Trigger: TCTGTGGAGGGGACGGAAGCACATGTGATGCCATTG...TGGACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAACAACACAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR GCA 90 bp CCCTGTGTTGTTTGGATCTCTCCAATCTGGCATTCCCTCCTAATACCGTGTCCACCAAACTGCAGCGGATaGGGACAGGAGGTTTGCTTT +
Preference number: 2 (lower is better)
Translates to: PCVVWISPIWHSLLIPCPPNCSG*GQEVCF
Trigger: AAAGCAAACCTCCTGTCCGCATCCGCTGCAGTTTGG...TGGACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAACAACACAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR CCA 90 bp CTAAGGCATCCTGTGTGGTGGCAGCAAAGGGCCTGGTCCTTTGGTCTGTACCATAAAGAAAGTCACGCTTaGGAGGCTCATTATCAAGGC +
Preference number: 2 (lower is better)
Translates to: LRHPVWWQQRAWSFGLYHKESHA*EAHYQG
Trigger: GCCTTGATAATGAGCCTCCCAAGCGTGACTTTCTTT...ATGGTACAGACCAAAGGACCAGGCCCTTTGCTGCCACCACACAGGATGCCTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR CCA 90 bp GCTCACTACTTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTCCGATGCTTGAATCCTaGACCACATTTTGGAGTACA +
Preference number: 2 (lower is better)
Translates to: AHYFWKVCHGGPASTDNAPMLES*TTFWST
Trigger: TGTACTCCAAAATGTGGTCCAGGATTCAAGCATCGG...AGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAAGTAGTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR CCA 90 bp TTTAGTAGGACTTTATCCCAGTGGCAGATACTGCTCCCAGGTGTAGGGTACCAGTGGCAGCAAAGGGCCTaGTCCTTTGGTCTGTACCAT +
Preference number: 2 (lower is better)
Translates to: FSRTLSQWQILLPGVGYQWQQRA*SFGLYH
Trigger: ATGGTACAGACCAAAGGACCAGGCCCTTTGCTGCCA...CTGGTACCCTACACCTGGGAGCAGTATCTGCCACTGGGATAAAGTCCTACTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR CAA 90 bp TTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTATaGTTATTATTTAGGAATAGGGCATCATGTAGCCATGGGGGTGGC +
Preference number: 2 (lower is better)
Translates to: FGRSAMVAQPPLTML*LLFRNRASCSHGGG
Trigger: GCCACCCCCATGGCTACATGATGCCCTATTCCTAAATAATAACAATAGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR-3UTR TCA 90 bp CCATTGATGCAGATATCCAGTGAATCCGCATTGCACTGGGTCCCATCGATCACCTTGGCTGATCTTCTGTaGGAACAATTAAGCGGGCCA +
Preference number: 2 (lower is better)
Translates to: PLMQISSESALHWVPSITLADLL*EQLSGP
Trigger: TGGCCCGCTTAATTGTTCTCACAGAAGATCAGCCAA...GGTGATCGATGGGACCCAGTGCAATGCGGATTCACTGGATATCTGCATCAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR TCA 90 bp CGGGCCATACTACCCATGGGCTGTTTGCCCTTCACTGAATGGCTAAGACGGCACATCTCCAAGTTTGGCTaGTCTTCTGTGAGAACAATT +
Preference number: 2 (lower is better)
Translates to: RAILPMGCLPFTEWLRRHISKFG*SSVRTI
Trigger: AATTGTTCTCACAGAAGATCAGCCAAACTTGGAGAT...GTGCCGTCTTAGCCATTCAGTGAAGGGCAAACAGCCCATGGGTAGTATGGCCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR TCA 90 bp TTTAGTAGGACTTTATCCCAGTGGCAGATACTGCTCCCAGGTGTAGGGTACCAGCTGGAATACTGTTGGTaGCACAGCGGTTGCTTTTGC +
Preference number: 2 (lower is better)
Translates to: FSRTLSQWQILLPGVGYQLEYCW*HSGCFC
Trigger: GCAAAAGCAACCGCTGTGTCACCAACAGTATTCCAG...CTGGTACCCTACACCTGGGAGCAGTATCTGCCACTGGGATAAAGTCCTACTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR TCA 90 bp CATTTGCTTTCACACTGCTGCATTGATGGAGGCCGAACAGTTTCTAGACAGTCAAAGGTCCGATCTTCCTaGTGCAGAGCACTGCCCTTG +
Preference number: 2 (lower is better)
Translates to: HLLSHCCIDGGRTVSRQSKVRSS*CRALPL
Trigger: CAAGGGCAGTGCTCTGCATCAGGAAGATCGGACCTT...TGACTGTCTAGAAACTGTTCGGCCTCCATCAATGCAGCAGTGTGAAAGCAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR TCA 90 bp GCTCACTACTTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTCTTCACTTCCATAGTTaGCCAAGTCATAACAGCTAC +
Preference number: 2 (lower is better)
Translates to: AHYFWKVCHGGPASTDNALHFHS*PSHNSY
Trigger: GTAGCTGTTATGACTTGGTCAACTATGGAAGTGAAG...AGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAAGTAGTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR-3UTR GCA 90 bp TGTGCTTCCGTCCCCTCCACAGACTCGACATCTATCTTCCCTAGCATCAGATCCCGCAGTAATGTGAGCTaGCATAAGTTTTGCTGCTTC +
Preference number: 2 (lower is better)
Translates to: CASVPSTDSTSIFPSIRSRSNVS*HKFCCF
Trigger: GAAGCAGCAAAACTTATGGCAGCTCACATTACTGCG...GGATCTGATGCTAGGGAAGATAGATGTCGAGTCTGTGGAGGGGACGGAAGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR CCA 90 bp CACATTTGCTTTCACACTGCTGCATTGATGGAGGCCGAACAGTTTCTAGACAGTCCCCCATCTATGCTCTaGGGCCAAGTGCCAAAAGGA +
Preference number: 2 (lower is better)
Translates to: HICFHTAALMEAEQFLDSPPSML*GQVPKG
Trigger: TCCTTTTGGCACTTGGCCCCAGAGCATAGATGGGGG...ACTGTCTAGAAACTGTTCGGCCTCCATCAATGCAGCAGTGTGAAAGCAAATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR CCA 90 bp TTTAGTAGGACTTTATCCCAGTGGCAGATACTGCTCCCAGGTGTAGGGTACCAGAGACGGCACTTGGGCTaGTCTTCTAAGGGCATCTTA +
Preference number: 2 (lower is better)
Translates to: FSRTLSQWQILLPGVGYQRRHLG*SSKGIL
Trigger: TAAGATGCCCTTAGAAGACCAGCCCAAGTGCCGTCT...CTGGTACCCTACACCTGGGAGCAGTATCTGCCACTGGGATAAAGTCCTACTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR CAA 90 bp GAAAGAACACAAACGCTCCACAGTAAGCAAGTCTCCCTGTGTTGTTaGGATCTCTCCAATCTGGCATTCCCTCCTAATACCGTGTCCAGC +
Preference number: 2 (lower is better)
Translates to: ERTQTLHSKQVSLCC*DLSNLAFPPNTVSS
Trigger: GCTGGACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAACAACACAGGGAGACTTGCTTACTGTGGAGCGTTTGTGTTCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR CAA 90 bp GTTGGTGCATGCATGGTGTACACCTGTGTACAATGGGGAGGCATTTaGGACACAAAGCACATTCATCAAGAACCTGCTGCAAGCTACACG +
Preference number: 2 (lower is better)
Translates to: VGACMVYTCVQWGGI*DTKHIHQEPAASYT
Trigger: CGTGTAGCTTGCAGCAGGTTCTTGATGAATGTGCTTTGTGTCCAAAATGCCTCCCCATTGTACACAGGTGTACACCATGCATGCACCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR-3UTR GCA 90 bp CCATTGATGCAGATATCCAGTGAATCCGCATTGCACTGGGTCCCATCGATCACCTGCCATAAGTTTTGCTaGTTCATGACCTTTCGTCCC +
Preference number: 2 (lower is better)
Translates to: PLMQISSESALHWVPSITCHKFC*FMTFRP
Trigger: GGGACGAAAGGTCATGAAGCAGCAAAACTTATGGCA...GGTGATCGATGGGACCCAGTGCAATGCGGATTCACTGGATATCTGCATCAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR CCA 90 bp ACTGTAGTCCAGCGTCTCCTCCTCAGAAGGTCCGATCTTCCTGATGCAGAGCACGTTTATCTCCAAGTTTaGCTGATCTTCTGTGAGAAC +
Preference number: 2 (lower is better)
Translates to: TVVQRLLLRRSDLPDAEHVYLQV*LIFCEN
Trigger: GTTCTCACAGAAGATCAGCCAAACTTGGAGATAAAC...GTGCTCTGCATCAGGAAGATCGGACCTTCTGAGGAGGAGACGCTGGACTACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR CCA 90 bp CAGTTTCCCTGGGGTTCCCTAAGTAGTCTATGTAGCTCACTACTTTTGGAAGGTAATGAACCACTCAGGTaGGCAGGGCTCAGTGTTGCA +
Preference number: 2 (lower is better)
Translates to: QFPWGSLSSLCSSLLLEGNEPLR*AGLSVA
Trigger: TGCAACACTGAGCCCTGCCCACCTGAGTGGTTCATT...ACCTTCCAAAAGTAGTGAGCTACATAGACTACTTAGGGAACCCCAGGGAAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR CCA 90 bp CAGTTTCCCTGGGGTTCCCTAAGTAGTCTATGTAGCTCACTACTTTTGGAAGGTGCTAGGGCTGACCAGTaGTTACGTTTTCCACAGGGT +
Preference number: 2 (lower is better)
Translates to: QFPWGSLSSLCSSLLLEGARADQ*LRFPQG
Trigger: ACCCTGTGGAAAACGTAACCACTGGTCAGCCCTAGC...ACCTTCCAAAAGTAGTGAGCTACATAGACTACTTAGGGAACCCCAGGGAAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR CAA 90 bp ACAAACTGCAAAAGGGTCTGCCTGGTTACCGAGCCAGTCTATCTTTaGCATGGTATCATCTCAGTAAGCTCAACACACGTGCAGCAATCC +
Preference number: 2 (lower is better)
Translates to: TNCKRVCLVTEPVYL*HGIISVSSTHVQQS
Trigger: GGATTGCTGCACGTGTGTTGAGCTTACTGAGATGATACCATGCAAAAGATAGACTGGCTCGGTAACCAGGCAGACCCTTTTGCAGTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR-3UTR TCA 90 bp CCCTGTGTTGTTTGGATCTCTCCAATCTGGCATTCCCTCCTAATACCGTGTCCAATTTCCATGATGAAATaGCAAGGCACTCTCTCTGGC +
Preference number: 2 (lower is better)
Translates to: PCVVWISPIWHSLLIPCPISMMK*QGTLSG
Trigger: GCCAGAGAGAGTGCCTTGTCATTTCATCATGGAAAT...TGGACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAACAACACAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR-3UTR GCA 90 bp CCATTGATGCAGATATCCAGTGAATCCGCATTGCACTGGGTCCCATCGATCACCTACTGGAAACGACATTaGTCATCAGCATCATACACC +
Preference number: 2 (lower is better)
Translates to: PLMQISSESALHWVPSITYWKRH*SSASYT
Trigger: GGTGTATGATGCTGATGAGCAATGTCGTTTCCAGTA...GGTGATCGATGGGACCCAGTGCAATGCGGATTCACTGGATATCTGCATCAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR GCA 90 bp TTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTATTGTTATTTTGCTTTCACACTGCTaGATTGATGGAGGCCGAACA +
Preference number: 2 (lower is better)
Translates to: FWKVCHGGPASTDNAIVILLSHC*IDGGRT
Trigger: TGTTCGGCCTCCATCAATGCAGCAGTGTGAAAGCAA...AATAACAATAGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR CCA 90 bp ACAACCACTGTAGTCCAGCGTCTCCTCCTCAGAAGGTCCGATCTTCCTGATGCATTTGGTGGGAGAGAATaGATTTCTGCCATTTACAGA +
Preference number: 2 (lower is better)
Translates to: TTTVVQRLLLRRSDLPDAFGGRE*ISAIYR
Trigger: TCTGTAAATGGCAGAAATCCATTCTCTCCCACCAAA...TGCATCAGGAAGATCGGACCTTCTGAGGAGGAGACGCTGGACTACAGTGGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR CCA 90 bp CCATTGATGCAGATATCCAGTGAATCCGCATTGCACTGGGTCCCATCGATCACCGTGTTTCCATCACTTTaGTGGGAGAGAATGGATTTC +
Preference number: 2 (lower is better)
Translates to: PLMQISSESALHWVPSITVFPSL*WERMDF
Trigger: GAAATCCATTCTCTCCCACCAAAGTGATGGAAACAC...GGTGATCGATGGGACCCAGTGCAATGCGGATTCACTGGATATCTGCATCAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR CCA 90 bp CCCTGTGTTGTTTGGATCTCTCCAATCTGGCATTCCCTCCTAATACCGTGTCCAACTGCATTATCGTGGTaGGCAATCCCATTTTCTGGA +
Preference number: 2 (lower is better)
Translates to: PCVVWISPIWHSLLIPCPTALSW*AIPFSG
Trigger: TCCAGAAAATGGGATTGCCCACCACGATAATGCAGT...TGGACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAACAACACAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR CCA 90 bp CACATTTGCTTTCACACTGCTGCATTGATGGAGGCCGAACAGTTTCTAGACAGTATCATACACCTGACCTaGGGCCACAGCTGGATAAAG +
Preference number: 2 (lower is better)
Translates to: HICFHTAALMEAEQFLDSIIHLT*GHSWIK
Trigger: CTTTATCCAGCTGTGGCCCCAGGTCAGGTGTATGAT...ACTGTCTAGAAACTGTTCGGCCTCCATCAATGCAGCAGTGTGAAAGCAAATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR CCA 90 bp TTTAGTAGGACTTTATCCCAGTGGCAGATACTGCTCCCAGGTGTAGGGTACCAGTACACCTGTGTACAATaGGGAGGCATTTTGGACACA +
Preference number: 2 (lower is better)
Translates to: FSRTLSQWQILLPGVGYQYTCVQ*GGILDT
Trigger: TGTGTCCAAAATGCCTCCCCATTGTACACAGGTGTA...CTGGTACCCTACACCTGGGAGCAGTATCTGCCACTGGGATAAAGTCCTACTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR CAA 90 bp TCTGGACATTGTGCAGCTGGGAATGTCTTAGAAAGGTCACTGCTCTaGCACAGAACAATCCGATGCTTGAATCCTGGACCACATTTTGGA +
Preference number: 2 (lower is better)
Translates to: SGHCAAGNVLERSLL*HRTIRCLNPGPHFG
Trigger: TCCAAAATGTGGTCCAGGATTCAAGCATCGGATTGTTCTGTGCAAGAGCAGTGACCTTTCTAAGACATTCCCAGCTGCACAATGTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR TCA 90 bp TTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTATTGTTATTAGTTTTGCTGCTTCATaGCCTTTCGTCCCACAAGAA +
Preference number: 2 (lower is better)
Translates to: FWKVCHGGPASTDNAIVISFAAS*PFVPQE
Trigger: TTCTTGTGGGACGAAAGGTCATGAAGCAGCAAAACT...AATAACAATAGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR TCA 90 bp CAGTTTCCCTGGGGTTCCCTAAGTAGTCTATGTAGCTCACTACTTTTGGAAGGTTCAATATTCCCAGTTTaGCACAGTGTCCCCTCAGCT +
Preference number: 2 (lower is better)
Translates to: QFPWGSLSSLCSSLLLEGSIFPV*HSVPSA
Trigger: AGCTGAGGGGACACTGTGTCAAACTGGGAATATTGA...ACCTTCCAAAAGTAGTGAGCTACATAGACTACTTAGGGAACCCCAGGGAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR TCA 90 bp TTGGAAATCATATGTATCTCACGGGGTTTAATCATTAGGGTACATTTACCGTTCTGTCCAAGGCCACACTaGGCAGAACACTGGCCCCAG +
Preference number: 2 (lower is better)
Translates to: LEIICISRGLIIRVHLPFCPRPH*AEHWPQ
Trigger: CTGGGGCCAGTGTTCTGCTCAGTGTGGCCTTGGACA...GAACGGTAAATGTACCCTAATGATTAAACCCCGTGAGATACATATGATTTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR TCA 90 bp TTTAGTAGGACTTTATCCCAGTGGCAGATACTGCTCCCAGGTGTAGGGTACCAGCTTCACTTCCATAGTTaGCCAAGTCATAACAGCTAC +
Preference number: 2 (lower is better)
Translates to: FSRTLSQWQILLPGVGYQLHFHS*PSHNSY
Trigger: GTAGCTGTTATGACTTGGTCAACTATGGAAGTGAAG...CTGGTACCCTACACCTGGGAGCAGTATCTGCCACTGGGATAAAGTCCTACTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR-3UTR GCA 90 bp TCTCTCGAAAATCTCGGGAACCCAAAGGGCATGGATCTGTGTTACAGGAGCGATAGCTGCCATAAGTTTTaGTGCTTCATGACCTTTCGT +
Preference number: 2 (lower is better)
Translates to: SLENLGNPKGMDLCYRSDSCHKF*CFMTFR
Trigger: ACGAAAGGTCATGAAGCAGCAAAACTTATGGCAGCT...ATCGCTCCTGTAACACAGATCCATGCCCTTTGGGTTCCCGAGATTTTCGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR GCA 90 bp CAGTTTCCCTGGGGTTCCCTAAGTAGTCTATGTAGCTCACTACTTTTGGAAGGTCACCATCACAAGTCTTaGTGCATTCCAACCAATCCC +
Preference number: 2 (lower is better)
Translates to: QFPWGSLSSLCSSLLLEGHHHKS*CIPTNP
Trigger: GGGATTGGTTGGAATGCAGCAAGACTTGTGATGGTG...ACCTTCCAAAAGTAGTGAGCTACATAGACTACTTAGGGAACCCCAGGGAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR GCA 90 bp GCTCACTACTTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTAAATCAGATCTGGATTaGAAACCTATGCCTAAAATG +
Preference number: 2 (lower is better)
Translates to: AHYFWKVCHGGPASTDNAKSDLD*KPMPKM
Trigger: CATTTTAGGCATAGGTTTGCAATCCAGATCTGATTT...AGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAAGTAGTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR-3UTR TCA 90 bp TGTCCTTGGCAGGTCTTACAACACATCTGTCTGAAGTATGCTCGACTGCAGAACGCTTGCATTCTCCATTaGTGCAGATATCCAGTGAAT +
Preference number: 2 (lower is better)
Translates to: CPWQVLQHICLKYARLQNACILH*CRYPVN
Trigger: ATTCACTGGATATCTGCATCAATGGAGAATGCAAGC...GTTCTGCAGTCGAGCATACTTCAGACAGATGTGTTGTAAGACCTGCCAAGGACA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR TCA 90 bp CAGTTTCCCTGGGGTTCCCTAAGTAGTCTATGTAGCTCACTACTTTTGGAAGGTACAGATGGTCATGACTaGGAGTGCAGAAAACATTCC +
Preference number: 2 (lower is better)
Translates to: QFPWGSLSSLCSSLLLEGTDGHD*ECRKHS
Trigger: GGAATGTTTTCTGCACTCTCAGTCATGACCATCTGT...ACCTTCCAAAAGTAGTGAGCTACATAGACTACTTAGGGAACCCCAGGGAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR-3UTR GCA 90 bp CATTTGCTTTCACACTGCTGCATTGATGGAGGCCGAACAGTTTCTAGACAGTCAAAAGGTCACTGCTCTTaGACAGAACAATCCGATGCT +
Preference number: 2 (lower is better)
Translates to: HLLSHCCIDGGRTVSRQSKGHCS*TEQSDA
Trigger: AGCATCGGATTGTTCTGTGCAAGAGCAGTGACCTTT...TGACTGTCTAGAAACTGTTCGGCCTCCATCAATGCAGCAGTGTGAAAGCAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR CAA 90 bp AATGTCTTAGAAAGGTCACTGCTCTTGCACAGAACAATCCGATGCTaGAATCCTGGACCACATTTTGGAGTACACTCAGACCAGTCCAAA +
Preference number: 2 (lower is better)
Translates to: NVLERSLLLHRTIRC*NPGPHFGVHSDQSK
Trigger: TTTGGACTGGTCTGAGTGTACTCCAAAATGTGGTCCAGGATTCAAGCATCGGATTGTTCTGTGCAAGAGCAGTGACCTTTCTAAGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR GCA 90 bp AAGGAGGTAAACAGGCTATTGGATTTACTCGAAAGAACACAAACGCTCCACAGTATCGAGGGACTTGTCTaGATGGTGGTTTATCTCCAA +
Preference number: 2 (lower is better)
Translates to: KEVNRLLDLLERTQTLHSIEGLV*MVVYLQ
Trigger: TTGGAGATAAACCACCATGCAGACAAGTCCCTCGAT...ACTGTGGAGCGTTTGTGTTCTTTCGAGTAAATCCAATAGCCTGTTTACCTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR CCA 90 bp ACATCTGGAACTCATCGTAATTGTCAACAAACTGCAAAAGGGTCTGCCTGGTTAGACTTGTCTGCATGGTaGTTTATCTCCAAGTTTGGC +
Preference number: 2 (lower is better)
Translates to: TSGTHRNCQQTAKGSAWLDLSAW*FISKFG
Trigger: GCCAAACTTGGAGATAAACCACCATGCAGACAAGTC...TAACCAGGCAGACCCTTTTGCAGTTTGTTGACAATTACGATGAGTTCCAGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR CCA 90 bp TTACTTGAAACTGTTTCATCCTGTTACATTCTGTGCGTGGCTCCCTCTAGAAAGTGGACATTGTGCAGCTaGGAATGTCTTAGAAAGGTC +
Preference number: 2 (lower is better)
Translates to: LLETVSSCYILCVAPSRKWTLCS*ECLRKV
Trigger: GACCTTTCTAAGACATTCCCAGCTGCACAATGTCCA...CTTTCTAGAGGGAGCCACGCACAGAATGTAACAGGATGAAACAGTTTCAAGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR TCA 90 bp TTGGAAATCATATGTATCTCACGGGGTTTAATCATTAGGGTACATTTACCGTTCTTCACACTGCTGCATTaGTGGAGGCCGAACAGTTTC +
Preference number: 2 (lower is better)
Translates to: LEIICISRGLIIRVHLPFFTLLH*WRPNSF
Trigger: GAAACTGTTCGGCCTCCATCAATGCAGCAGTGTGAA...GAACGGTAAATGTACCCTAATGATTAAACCCCGTGAGATACATATGATTTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR GCA 90 bp TTGGAAATCATATGTATCTCACGGGGTTTAATCATTAGGGTACATTTACCGTTCACATTGGCGGGAGGTTaGTCCATACTGGAAACGACA +
Preference number: 2 (lower is better)
Translates to: LEIICISRGLIIRVHLPFTLAGG*SILETT
Trigger: TGTCGTTTCCAGTATGGAGCAACCTCCCGCCAATGT...GAACGGTAAATGTACCCTAATGATTAAACCCCGTGAGATACATATGATTTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR CCA 90 bp ACATCTGGAACTCATCGTAATTGTCAACAAACTGCAAAAGGGTCTGCCTGGTTAAGAACTGCATTATCGTaGTGGGCAATCCCATTTTCT +
Preference number: 2 (lower is better)
Translates to: TSGTHRNCQQTAKGSAWLRTALS*WAIPFS
Trigger: AGAAAATGGGATTGCCCACCACGATAATGCAGTTCT...TAACCAGGCAGACCCTTTTGCAGTTTGTTGACAATTACGATGAGTTCCAGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR CCA 90 bp AAGGAGGTAAACAGGCTATTGGATTTACTCGAAAGAACACAAACGCTCCACAGTAGCTTCCAAGGATTCTaGTTCATCAGTTGGTCTCTT +
Preference number: 2 (lower is better)
Translates to: KEVNRLLDLLERTQTLHSSFQGF*FISWSL
Trigger: AAGAGACCAACTGATGAACCAGAATCCTTGGAAGCT...ACTGTGGAGCGTTTGTGTTCTTTCGAGTAAATCCAATAGCCTGTTTACCTCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR TCA 90 bp ATTATCTTAATGGTCCAAGGAGGTAAACAGGCTATTGGATTTACTCGAAAGAACCTGGGTGGCTCTCTTTaGTGGATGCATTTCCATGAT +
Preference number: 2 (lower is better)
Translates to: IILMVQGGKQAIGFTRKNLGGSL*WMHFHD
Trigger: ATCATGGAAATGCATCCATCAAAGAGAGCCACCCAG...GTTCTTTCGAGTAAATCCAATAGCCTGTTTACCTCCTTGGACCATTAAGATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR-3UTR GCA 90 bp AAGGAGGTAAACAGGCTATTGGATTTACTCGAAAGAACACAAACGCTCCACAGTTCTAGTAATAAGAACTaGATTATCGTGGTGGGCAAT +
Preference number: 2 (lower is better)
Translates to: KEVNRLLDLLERTQTLHSSSNKN*IIVVGN
Trigger: ATTGCCCACCACGATAATGCAGTTCTTATTACTAGA...ACTGTGGAGCGTTTGTGTTCTTTCGAGTAAATCCAATAGCCTGTTTACCTCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR GCA 72 bp AGCGAGGAGGAGGGCAGCGGCCCAAACTGCAGCGGATaGGGACAGGAGGTTTGCTTTCCTCTGGACATTGTG +
Preference number: 3 (lower is better)
Translates to: SEEEGSGPNCSG*GQEVCFPLDIV
Trigger: CACAATGTCCAGAGGAAAGCAAACCTCCTGTCCGCATCCGCTGCAGTTTGGGCCGCTGCCCTCCTCCTCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR GCA 72 bp ACACTGACTGCCCTCCTCTTCCAGCATCAGCCAAGGTaGTGTGCAGTGCCTGGGGGATGGCCCTCACAATGG +
Preference number: 3 (lower is better)
Translates to: TLTALLFQHQPR*CAVPGGWPSQW
Trigger: CCATTGTGAGGGCCATCCCCCAGGCACTGCACAGCACCTTGGCTGATGCTGGAAGAGGAGGGCAGTCAGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR GCA 72 bp CCCTCCTCTTCCAGCATCAGCCAAGGTGCTGTGCAGTaGCTGGGGGATGGCCCTCACAATGGTAGTTTCCAG +
Preference number: 3 (lower is better)
Translates to: PSSSSISQGAVQ*LGDGPHNGSFQ
Trigger: CTGGAAACTACCATTGTGAGGGCCATCCCCCAGGCACTGCACAGCACCTTGGCTGATGCTGGAAGAGGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR-3UTR CAA 90 bp GCTCACTACTTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTTGCAGAGCACTGCCCTaGTGCGCATCCCACCATCAC +
Preference number: 3 (lower is better)
Translates to: AHYFWKVCHGGPASTDNACRALP*CASHHH
Trigger: GTGATGGTGGGATGCGCACAAGGGCAGTGCTCTGCA...AGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAAGTAGTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR CAA 90 bp TTCTGTGCGTGGCTCCCTCTAGAAAGGCACTCTGATGCTGCCCCGGGGGATGCCGCTTTCCTCTGGACATaGTGCAGCTGGGAATGTCTT +
Preference number: 3 (lower is better)
Translates to: FCAWLPLERHSDAAPGDAAFLWT*CSWECL
Trigger: AAGACATTCCCAGCTGCACAATGTCCAGAGGAAAGC...GGCATCCCCCGGGGCAGCATCAGAGTGCCTTTCTAGAGGGAGCCACGCACAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR TCA 72 bp AGTCCAGCGTCTCCTCCTCAGAAGGTCCGATCTTCCTaGTGCAGAGCACTGCCCTTGTGCGCATCCCACCAT +
Preference number: 3 (lower is better)
Translates to: SPASPPQKVRSS*CRALPLCASHH
Trigger: ATGGTGGGATGCGCACAAGGGCAGTGCTCTGCATCAGGAAGATCGGACCTTCTGAGGAGGAGACGCTGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR TCA 72 bp CTCAGACCAGTCCAAAGCCACCCACTGTGGTGGACATaGCTGGTTGTTGCAGGGCTCTTTTTCGACAGGCCG +
Preference number: 3 (lower is better)
Translates to: LRPVQSHPLWWT*LVVAGLFFDRP
Trigger: CGGCCTGTCGAAAAAGAGCCCTGCAACAACCAGTCATGTCCACCACAGTGGGTGGCTTTGGACTGGTCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR GCA 72 bp AGCGGCCCAAACTGCAGCGGATGCGGACAGGAGGTTTaGTTTCCTCTGGACATTGTGCAGCTGGGAATGTCT +
Preference number: 3 (lower is better)
Translates to: SGPNCSGCGQEV*FPLDIVQLGMS
Trigger: AGACATTCCCAGCTGCACAATGTCCAGAGGAAAGCAAACCTCCTGTCCGCATCCGCTGCAGTTTGGGCCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR CCA 72 bp GACCAGTCCAAAGCCACCCACTGTGGTGGACATGACTaGTTGTTGCAGGGCTCTTTTTCGACAGGCCGGTGT +
Preference number: 3 (lower is better)
Translates to: DQSKATHCGGHD*LLQGSFSTGRC
Trigger: ACACCGGCCTGTCGAAAAAGAGCCCTGCAACAACCAGTCATGTCCACCACAGTGGGTGGCTTTGGACTGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR CCA 72 bp GCATCCTGTGTGGTGGCAGCAAAGGGCCTGGTCCTTTaGTCTGTACCATACCCCAGGTCTGGTTTCTGCATG +
Preference number: 3 (lower is better)
Translates to: ASCVVAAKGLVL*SVPYPRSGFCM
Trigger: CATGCAGAAACCAGACCTGGGGTATGGTACAGACCAAAGGACCAGGCCCTTTGCTGCCACCACACAGGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR GCA 72 bp CTCCTCAGAAGGTCCGATCTTCCTGATGCAGAGCACTaGCCTTGTGCGCATCCCACCATCACAAGTCTTGCT +
Preference number: 3 (lower is better)
Translates to: LLRRSDLPDAEH*PCAHPTITSLA
Trigger: AGCAAGACTTGTGATGGTGGGATGCGCACAAGGGCAGTGCTCTGCATCAGGAAGATCGGACCTTCTGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR CCA 72 bp GACCTGGGGCCACAGCTGGATAAAGAAAGTCACGCTTaGGAGGCTCATTATCAAGGCAAGTACCACGGCCTG +
Preference number: 3 (lower is better)
Translates to: DLGPQLDKESHA*EAHYQGKYHGL
Trigger: CAGGCCGTGGTACTTGCCTTGATAATGAGCCTCCCAAGCGTGACTTTCTTTATCCAGCTGTGGCCCCAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR CCA 72 bp GAACTAAGGCATCCTGTGTGGTGGCAGCAAAGGGCCTaGTCCTTTGGTCTGTACCATACCCCAGGTCTGGTT +
Preference number: 3 (lower is better)
Translates to: ELRHPVWWQQRA*SFGLYHTPGLV
Trigger: AACCAGACCTGGGGTATGGTACAGACCAAAGGACCAGGCCCTTTGCTGCCACCACACAGGATGCCTTAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR CCA 72 bp TTGCCCTTCACTGAATGGCTAAGACGGCACTTGGGCTaGTCTTCTAAGGGCATCTTAGATCCGGGCCCTGGT +
Preference number: 3 (lower is better)
Translates to: LPFTEWLRRHLG*SSKGILDPGPG
Trigger: ACCAGGGCCCGGATCTAAGATGCCCTTAGAAGACCAGCCCAAGTGCCGTCTTAGCCATTCAGTGAAGGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR CCA 72 bp GCCATACTACCCATGGGCTGTTTGCCCTTCACTGAATaGCTAAGACGGCACTTGGGCTGGTCTTCTAAGGGC +
Preference number: 3 (lower is better)
Translates to: AILPMGCLPFTE*LRRHLGWSSKG
Trigger: GCCCTTAGAAGACCAGCCCAAGTGCCGTCTTAGCCATTCAGTGAAGGGCAAACAGCCCATGGGTAGTATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR-3UTR CAA 90 bp TGTGCTTCCGTCCCCTCCACAGACTCGACATCTATCTTCCCTAGCATCAGATCCTCCAGTGAATCCGCATaGCACTGGGTCCCATCGATC +
Preference number: 3 (lower is better)
Translates to: CASVPSTDSTSIFPSIRSSSESA*HWVPSI
Trigger: GATCGATGGGACCCAGTGCAATGCGGATTCACTGGA...GGATCTGATGCTAGGGAAGATAGATGTCGAGTCTGTGGAGGGGACGGAAGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR CAA 90 bp GTGGCAGCAAAGGGCCTGGTCCTTTGGTCTGTACCATACCCCAGGTCTGGTTTCTGTGGGTCAGTGTCCTaGGCAGGTCTTACAACACAT +
Preference number: 3 (lower is better)
Translates to: VAAKGLVLWSVPYPRSGFCGSVS*AGLTTH
Trigger: ATGTGTTGTAAGACCTGCCAAGGACACTGACCCACA...GAAACCAGACCTGGGGTATGGTACAGACCAAAGGACCAGGCCCTTTGCTGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR TCA 72 bp CTTGGGAGGCTCATTATCAAGGCAAGTACCACGGCCTaGACTGCAAAGCCGTCGCCGGAAAACATCAGAAGC +
Preference number: 3 (lower is better)
Translates to: LGRLIIKASTTA*TAKPSPENIRS
Trigger: GCTTCTGATGTTTTCCGGCGACGGCTTTGCAGTTCAGGCCGTGGTACTTGCCTTGATAATGAGCCTCCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR GCA 72 bp GAGGCTCATTATCAAGGCAAGTACCACGGCCTGAACTaGAAAGCCGTCGCCGGAAAACATCAGAAGCTGGCA +
Preference number: 3 (lower is better)
Translates to: EAHYQGKYHGLN*KAVAGKHQKLA
Trigger: TGCCAGCTTCTGATGTTTTCCGGCGACGGCTTTGCAGTTCAGGCCGTGGTACTTGCCTTGATAATGAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR CCA 72 bp CCATTGATGCAGATATCCAGTGAATCCGCATTGCACTaGGTCCCATCGATCACCGCAGGAGCACGTTCAGTG +
Preference number: 3 (lower is better)
Translates to: PLMQISSESALH*VPSITAGARSV
Trigger: CACTGAACGTGCTCCTGCGGTGATCGATGGGACCCAGTGCAATGCGGATTCACTGGATATCTGCATCAATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR CAA 90 bp TGTGCTTCCGTCCCCTCCACAGACTCGACATCTATCTTCCCTAGCATCAGATCCTTGGTGACACAGCGGTaGCTTTTGCTGAGACACCAG +
Preference number: 3 (lower is better)
Translates to: CASVPSTDSTSIFPSIRSLVTQR*LLLRHQ
Trigger: CTGGTGTCTCAGCAAAAGCAACCGCTGTGTCACCAA...GGATCTGATGCTAGGGAAGATAGATGTCGAGTCTGTGGAGGGGACGGAAGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR CAA 90 bp CTAAGGCATCCTGTGTGGTGGCAGCAAAGGGCCTGGTCCTTTGGTCTGTACCATTGTGAACAGAGCCTCTaGGTATCTGCACCACTTCCA +
Preference number: 3 (lower is better)
Translates to: LRHPVWWQQRAWSFGLYHCEQSL*VSAPLP
Trigger: TGGAAGTGGTGCAGATACCAAGAGGCTCTGTTCACA...ATGGTACAGACCAAAGGACCAGGCCCTTTGCTGCCACCACACAGGATGCCTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR CAA 90 bp CCATTGATGCAGATATCCAGTGAATCCGCATTGCACTGGGTCCCATCGATCACCACACAGCGGTTGCTTTaGCTGAGACACCAGAGCTCT +
Preference number: 3 (lower is better)
Translates to: PLMQISSESALHWVPSITTQRLL*LRHQSS
Trigger: AGAGCTCTGGTGTCTCAGCAAAAGCAACCGCTGTGT...GGTGATCGATGGGACCCAGTGCAATGCGGATTCACTGGATATCTGCATCAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR CAA 90 bp TTTAGTAGGACTTTATCCCAGTGGCAGATACTGCTCCCAGGTGTAGGGTACCAGGCTGCTGGAATACTGTaGGTGACACAGCGGTTGCTT +
Preference number: 3 (lower is better)
Translates to: FSRTLSQWQILLPGVGYQAAGIL*VTQRLL
Trigger: AAGCAACCGCTGTGTCACCAACAGTATTCCAGCAGC...CTGGTACCCTACACCTGGGAGCAGTATCTGCCACTGGGATAAAGTCCTACTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR CAA 90 bp CTAAGGCATCCTGTGTGGTGGCAGCAAAGGGCCTGGTCCTTTGGTCTGTACCATAGTGTTGCAGGCTCTTaGATTTTCAGGTGGCTTACT +
Preference number: 3 (lower is better)
Translates to: LRHPVWWQQRAWSFGLYHSVAGS*IFRWLT
Trigger: AGTAAGCCACCTGAAAATCAAAGAGCCTGCAACACT...ATGGTACAGACCAAAGGACCAGGCCCTTTGCTGCCACCACACAGGATGCCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR TCA 72 bp TACGTGCTTGCATTCTCCATTGATGCAGATATCCAGTaGATCCGCATTGCACTGGGTCCCATCGATCACCGC +
Preference number: 3 (lower is better)
Translates to: YVLAFSIDADIQ*IRIALGPIDHR
Trigger: GCGGTGATCGATGGGACCCAGTGCAATGCGGATTCACTGGATATCTGCATCAATGGAGAATGCAAGCACGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR CCA 72 bp CTCATCAGCATCATACACCTGACCTGGGGCCACAGCTaGATAAAGAAAGTCACGCTTGGGAGGCTCATTATC +
Preference number: 3 (lower is better)
Translates to: LISIIHLTWGHS*IKKVTLGRLII
Trigger: GATAATGAGCCTCCCAAGCGTGACTTTCTTTATCCAGCTGTGGCCCCAGGTCAGGTGTATGATGCTGATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR CCA 72 bp GAAACGACATTGCTCATCAGCATCATACACCTGACCTaGGGCCACAGCTGGATAAAGAAAGTCACGCTTGGG +
Preference number: 3 (lower is better)
Translates to: ETTLLISIIHLT*GHSWIKKVTLG
Trigger: CCCAAGCGTGACTTTCTTTATCCAGCTGTGGCCCCAGGTCAGGTGTATGATGCTGATGAGCAATGTCGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR CAA 90 bp ACTTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTATTGTTACCACCATCACAAGTCTaGCTGCATTCCAACCAATCC +
Preference number: 3 (lower is better)
Translates to: TFGRSAMVAQPPLTMLLLPPSQV*LHSNQS
Trigger: GGATTGGTTGGAATGCAGCAAGACTTGTGATGGTGG...TAACAATAGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR CAA 90 bp TTTAGTAGGACTTTATCCCAGTGGCAGATACTGCTCCCAGGTGTAGGGTACCAGATGCGGACAGGAGGTTaGCTTTCCTCTGGACATTGT +
Preference number: 3 (lower is better)
Translates to: FSRTLSQWQILLPGVGYQMRTGG*LSSGHC
Trigger: ACAATGTCCAGAGGAAAGCAAACCTCCTGTCCGCAT...CTGGTACCCTACACCTGGGAGCAGTATCTGCCACTGGGATAAAGTCCTACTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR TCA 72 bp AAGCCGTGCTGTGGCTGGGGAGGATGTAAACACAAGTaGGTTGGAGGGACTCAAATAAGAACTAAGGCATCC +
Preference number: 3 (lower is better)
Translates to: KPCCGWGGCKHK*VGGTQIRTKAS
Trigger: GGATGCCTTAGTTCTTATTTGAGTCCCTCCAACTCACTTGTGTTTACATCCTCCCCAGCCACAGCACGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR GCA 72 bp GTTAACTGTTCTTTGAAAAGGCGCAAGGGAATTCAGTaGTCGGGCCATACTACCCATGGGCTGTTTGCCCTT +
Preference number: 3 (lower is better)
Translates to: VNCSLKRRKGIQ*SGHTTHGLFAL
Trigger: AAGGGCAAACAGCCCATGGGTAGTATGGCCCGAGCACTGAATTCCCTTGCGCCTTTTCAAAGAACAGTTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR CCA 72 bp GAGACACCAGAGCTCTCTACACACCCATATTTACATTaGCGGGAGGTTGCTCCATACTGGAAACGACATTGC +
Preference number: 3 (lower is better)
Translates to: ETPELSTHPYLH*REVAPYWKRHC
Trigger: GCAATGTCGTTTCCAGTATGGAGCAACCTCCCGCCAATGTAAATATGGGTGTGTAGAGAGCTCTGGTGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR CCA 72 bp AGCAAGTCTCCCTGTGTTGTTTGGATCTCTCCAATCTaGCATTCCCTCCTAATACCGTGTCCAGCACTTTGG +
Preference number: 3 (lower is better)
Translates to: SKSPCVVWISPI*HSLLIPCPALW
Trigger: CCAAAGTGCTGGACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAACAACACAGGGAGACTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR CCA 72 bp CAGATACTGCTCCCAGGTGTAGGGTACCAGTTTCCCTaGGGTTCCCTAAGTAGTCTATGTAGCTCACTACTT +
Preference number: 3 (lower is better)
Translates to: QILLPGVGYQFP*GSLSSLCSSLL
Trigger: AAGTAGTGAGCTACATAGACTACTTAGGGAACCCCAGGGAAACTGGTACCCTACACCTGGGAGCAGTATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR-3UTR CAA 90 bp TTTAGTAGGACTTTATCCCAGTGGCAGATACTGCTCCCAGGTGTAGGGTACCAGAAGCTATCGAGGGACTaGTCTGCATGGTGGTTTATC +
Preference number: 3 (lower is better)
Translates to: FSRTLSQWQILLPGVGYQKLSRD*SAWWFI
Trigger: GATAAACCACCATGCAGACAAGTCCCTCGATAGCTT...CTGGTACCCTACACCTGGGAGCAGTATCTGCCACTGGGATAAAGTCCTACTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR CAA 90 bp TGTGCTTCCGTCCCCTCCACAGACTCGACATCTATCTTCCCTAGCATCAGATCCATACTGGAAACGACATaGCTCATCAGCATCATACAC +
Preference number: 3 (lower is better)
Translates to: CASVPSTDSTSIFPSIRSILETT*LISIIH
Trigger: GTGTATGATGCTGATGAGCAATGTCGTTTCCAGTAT...GGATCTGATGCTAGGGAAGATAGATGTCGAGTCTGTGGAGGGGACGGAAGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR CAA 90 bp TCTCTCGAAAATCTCGGGAACCCAAAGGGCATGGATCTGTGTTACAGGAGCGATACACCCATATTTACATaGGCGGGAGGTTGCTCCATA +
Preference number: 3 (lower is better)
Translates to: SLENLGNPKGMDLCYRSDTPIFT*AGGCSI
Trigger: TATGGAGCAACCTCCCGCCAATGTAAATATGGGTGT...ATCGCTCCTGTAACACAGATCCATGCCCTTTGGGTTCCCGAGATTTTCGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR CAA 90 bp TGTCCTTGGCAGGTCTTACAACACATCTGTCTGAAGTATGCTCGACTGCAGAACGGACATGACTGGTTGTaGCAGGGCTCTTTTTCGACA +
Preference number: 3 (lower is better)
Translates to: CPWQVLQHICLKYARLQNGHDWL*QGSFST
Trigger: TGTCGAAAAAGAGCCCTGCAACAACCAGTCATGTCC...GTTCTGCAGTCGAGCATACTTCAGACAGATGTGTTGTAAGACCTGCCAAGGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR TCA 72 bp TCACCAGGGCACATTAGCACCAAGTTAACTGTTCTTTaGAAAGGCGCAAGGGAATTCAGTGCTCGGGCCATA +
Preference number: 3 (lower is better)
Translates to: SPGHISTKLTVL*KGAREFSARAI
Trigger: TATGGCCCGAGCACTGAATTCCCTTGCGCCTTTTCAAAGAACAGTTAACTTGGTGCTAATGTGCCCTGGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR GCA 72 bp TCCTTGGCAGGTCTTACAACACATCTGTCTGAAGTATaGTCGACTGCAGAACTTGAACTTCAGCACCAGTGG +
Preference number: 3 (lower is better)
Translates to: SLAGLTTHLSEV*STAELELQHQW
Trigger: CCACTGGTGCTGAAGTTCAAGTTCTGCAGTCGAGCATACTTCAGACAGATGTGTTGTAAGACCTGCCAAGGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR CCA 72 bp AATATTCCCAGTTTGACACAGTGTCCCCTCAGCTGCTaGAATACTGTTGGTGACACAGCGGTTGCTTTTGCT +
Preference number: 3 (lower is better)
Translates to: NIPSLTQCPLSC*NTVGDTAVAFA
Trigger: AGCAAAAGCAACCGCTGTGTCACCAACAGTATTCCAGCAGCTGAGGGGACACTGTGTCAAACTGGGAATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR CCA 72 bp GCAGGGCTCAGTGTTGCAGGCTCTTTGATTTTCAGGTaGCTTACTGTCAGGATCACAGTAATTGTTCTGGAC +
Preference number: 3 (lower is better)
Translates to: AGLSVAGSLIFR*LTVRITVIVLD
Trigger: GTCCAGAACAATTACTGTGATCCTGACAGTAAGCCACCTGAAAATCAAAGAGCCTGCAACACTGAGCCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR CCA 72 bp AAACGCTCCACAGTAAGCAAGTCTCCCTGTGTTGTTTaGATCTCTCCAATCTGGCATTCCCTCCTAATACCG +
Preference number: 3 (lower is better)
Translates to: KRSTVSKSPCVV*ISPIWHSLLIP
Trigger: CGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAACAACACAGGGAGACTTGCTTACTGTGGAGCGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR-3UTR CAA 90 bp CCCTGTGTTGTTTGGATCTCTCCAATCTGGCATTCCCTCCTAATACCGTGTCCAGGTGTTTCCATCACTTaGGTGGGAGAGAATGGATTT +
Preference number: 3 (lower is better)
Translates to: PCVVWISPIWHSLLIPCPGVSIT*VGENGF
Trigger: AAATCCATTCTCTCCCACCAAAGTGATGGAAACACC...TGGACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAACAACACAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR CAA 90 bp ATCCGGGCCCTGGTGATTCCTCTTGTATCATCAATAGCTCTCTCTGGAAGGCTCTCCCAAATTCTGTTCTaGAAGCAGAACCATGACGAT +
Preference number: 3 (lower is better)
Translates to: IRALVIPLVSSIALSGRLSQILF*KQNHDD
Trigger: ATCGTCATGGTTCTGCTTCAAGAACAGAATTTGGGA...GAGCCTTCCAGAGAGAGCTATTGATGATACAAGAGGAATCACCAGGGCCCGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR CAA 90 bp ACATCTGGAACTCATCGTAATTGTCAACAAACTGCAAAAGGGTCTGCCTGGTTATACATTGGCGGGAGGTaGCTCCATACTGGAAACGAC +
Preference number: 3 (lower is better)
Translates to: TSGTHRNCQQTAKGSAWLYIGGR*LHTGND
Trigger: GTCGTTTCCAGTATGGAGCAACCTCCCGCCAATGTA...TAACCAGGCAGACCCTTTTGCAGTTTGTTGACAATTACGATGAGTTCCAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR CAA 90 bp ACAACCACTGTAGTCCAGCGTCTCCTCCTCAGAAGGTCCGATCTTCCTGATGCAATTCTGGTTCATCAGTaGGTCTCTTGTAATGAAAAG +
Preference number: 3 (lower is better)
Translates to: TTTVVQRLLLRRSDLPDAILVHQ*VSCNEK
Trigger: CTTTTCATTACAAGAGACCAACTGATGAACCAGAAT...TGCATCAGGAAGATCGGACCTTCTGAGGAGGAGACGCTGGACTACAGTGGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR CAA 90 bp CCCTGTGTTGTTTGGATCTCTCCAATCTGGCATTCCCTCCTAATACCGTGTCCAAGAACAATCCGATGCTaGAATCCTGGACCACATTTT +
Preference number: 3 (lower is better)
Translates to: PCVVWISPIWHSLLIPCPRTIRC*NPGPHF
Trigger: AAAATGTGGTCCAGGATTCAAGCATCGGATTGTTCT...TGGACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAACAACACAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR CAA 90 bp CAGTTTCCCTGGGGTTCCCTAAGTAGTCTATGTAGCTCACTACTTTTGGAAGGTTTTCACACTGCTGCATaGATGGAGGCCGAACAGTTT +
Preference number: 3 (lower is better)
Translates to: QFPWGSLSSLCSSLLLEGFHTAA*MEAEQF
Trigger: AAACTGTTCGGCCTCCATCAATGCAGCAGTGTGAAA...ACCTTCCAAAAGTAGTGAGCTACATAGACTACTTAGGGAACCCCAGGGAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR TCA 72 bp AAAGGTCACTGCTCTTGCACAGAACAATCCGATGCTTaGATCCTGGACCACATTTTGGAGTACACTCAGACC +
Preference number: 3 (lower is better)
Translates to: KGHCSCTEQSDA*ILDHILEYTQT
Trigger: GGTCTGAGTGTACTCCAAAATGTGGTCCAGGATTCAAGCATCGGATTGTTCTGTGCAAGAGCAGTGACCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR GCA 72 bp TTCAATATTCCCAGTTTGACACAGTGTCCCCTCAGCTaGTGGAATACTGTTGGTGACACAGCGGTTGCTTTT +
Preference number: 3 (lower is better)
Translates to: FNIPSLTQCPLS*WNTVGDTAVAF
Trigger: AAAAGCAACCGCTGTGTCACCAACAGTATTCCAGCAGCTGAGGGGACACTGTGTCAAACTGGGAATATTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR CCA 72 bp ACTGCTCTTGCACAGAACAATCCGATGCTTGAATCCTaGACCACATTTTGGAGTACACTCAGACCAGTCCAA +
Preference number: 3 (lower is better)
Translates to: TALAQNNPMLES*TTFWSTLRPVQ
Trigger: TTGGACTGGTCTGAGTGTACTCCAAAATGTGGTCCAGGATTCAAGCATCGGATTGTTCTGTGCAAGAGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR CCA 72 bp GGTGTTGGTGCATGCATGGTGTACACCTGTGTACAATaGGGAGGCATTTTGGACACAAAGCACATTCATCAA +
Preference number: 3 (lower is better)
Translates to: GVGACMVYTCVQ*GGILDTKHIHQ
Trigger: TTGATGAATGTGCTTTGTGTCCAAAATGCCTCCCCATTGTACACAGGTGTACACCATGCATGCACCAACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR TCA 72 bp CTTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTaGCAATGCTATTGTTATTATTTAGGAATAGGGCAT +
Preference number: 3 (lower is better)
Translates to: LLEGLPWWPSLH*QCYCYYLGIGH
Trigger: ATGCCCTATTCCTAAATAATAACAATAGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR GCA 72 bp CCAGGAAAAAGGATTGGTATTCGCAGTAATGTGAGCTaGCATAAGTTTTGCTGCTTCATGACCTTTCGTCCC +
Preference number: 3 (lower is better)
Translates to: PGKRIGIRSNVS*HKFCCFMTFRP
Trigger: GGGACGAAAGGTCATGAAGCAGCAAAACTTATGGCAGCTCACATTACTGCGAATACCAATCCTTTTTCCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR GCA 72 bp TTAGAAATGGGGGTACTGTCACATTTGCTTTCACACTaGTGCATTGATGGAGGCCGAACAGTTTCTAGACAG +
Preference number: 3 (lower is better)
Translates to: LEMGVLSHLLSH*CIDGGRTVSRQ
Trigger: CTGTCTAGAAACTGTTCGGCCTCCATCAATGCAGCAGTGTGAAAGCAAATGTGACAGTACCCCCATTTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR CCA 72 bp GGTAATGCATTTGCAAGGACATCAATCCTCTTCCTCTaGGTGGCTCTCTTTGATGGATGCATTTCCATGATG +
Preference number: 3 (lower is better)
Translates to: GNAFARTSILFL*VALFDGCISMM
Trigger: CATCATGGAAATGCATCCATCAAAGAGAGCCACCCAGAGGAAGAGGATTGATGTCCTTGCAAATGCATTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR-3UTR CAA 90 bp GTAATGAAAAGCTGTCCCAGCAACATCAAATTTCCTAGGCCAGTCAATAGTCCACTGGGCAGTGAATCATaGAAGAACCCTTCAATGGCA +
Preference number: 3 (lower is better)
Translates to: VMKSCPSNIKFPRPVNSPLGSES*KNPSMA
Trigger: TGCCATTGAAGGGTTCTTCAATGATTCACTGCCCAG...TGGACTATTGACTGGCCTAGGAAATTTGATGTTGCTGGGACAGCTTTTCATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR-3UTR CAA 90 bp TTTAGTAGGACTTTATCCCAGTGGCAGATACTGCTCCCAGGTGTAGGGTACCAGGAGCTGATATTTATGTaGGAGAAAATCAGATCTGGA +
Preference number: 3 (lower is better)
Translates to: FSRTLSQWQILLPGVGYQELIFM*EKIRSG
Trigger: TCCAGATCTGATTTTCTCCAACATAAATATCAGCTC...CTGGTACCCTACACCTGGGAGCAGTATCTGCCACTGGGATAAAGTCCTACTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR TCA 72 bp AAATATTATCACAGCCTACGTGCTTGCATTCTCCATTaGTGCAGATATCCAGTGAATCCGCATTGCACTGGG +
Preference number: 3 (lower is better)
Translates to: KYYHSLRACILH*CRYPVNPHCTG
Trigger: CCCAGTGCAATGCGGATTCACTGGATATCTGCATCAATGGAGAATGCAAGCACGTAGGCTGTGATAATATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR GCA 72 bp TTAGAAAGGTCACTGCTCTTGCACAGAACAATCCGATaGTTGAATCCTGGACCACATTTTGGAGTACACTCA +
Preference number: 3 (lower is better)
Translates to: LERSLLLHRTIR*LNPGPHFGVHS
Trigger: TGAGTGTACTCCAAAATGTGGTCCAGGATTCAAGCATCGGATTGTTCTGTGCAAGAGCAGTGACCTTTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR CCA 72 bp AAGAACTGCATTATCGTGGTGGGCAATCCCATTTTCTaGAATGGTGTTTCCATCACTTTGGTGGGAGAGAAT +
Preference number: 3 (lower is better)
Translates to: KNCIIVVGNPIF*NGVSITLVGEN
Trigger: ATTCTCTCCCACCAAAGTGATGGAAACACCATTCCAGAAAATGGGATTGCCCACCACGATAATGCAGTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR GCA 72 bp GGTATTCGCAGTAATGTGAGCTGCCATAAGTTTTGCTaGTTCATGACCTTTCGTCCCACAAGAATTTCCAAT +
Preference number: 3 (lower is better)
Translates to: GIRSNVSCHKFC*FMTFRPTRISN
Trigger: ATTGGAAATTCTTGTGGGACGAAAGGTCATGAAGCAGCAAAACTTATGGCAGCTCACATTACTGCGAATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR GCA 72 bp ATTGGTATTCGCAGTAATGTGAGCTGCCATAAGTTTTaGTGCTTCATGACCTTTCGTCCCACAAGAATTTCC +
Preference number: 3 (lower is better)
Translates to: IGIRSNVSCHKF*CFMTFRPTRIS
Trigger: GGAAATTCTTGTGGGACGAAAGGTCATGAAGCAGCAAAACTTATGGCAGCTCACATTACTGCGAATACCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR TCA 72 bp AGCACTGAGTTTATAGACTTGCACAGCTGCAGTAACTaGTGCACTGCTTTAAACTATGCCCCTCATTATTGT +
Preference number: 3 (lower is better)
Translates to: STEFIDLHSCSN*CTALNYAPHYC
Trigger: ACAATAATGAGGGGCATAGTTTAAAGCAGTGCATCAGTTACTGCAGCTGTGCAAGTCTATAAACTCAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR CCA 72 bp ATCTGGCATTCCCTCCTAATACCGTGTCCAGCACTTTaGATCAATAAATCCCACTTCACAGAAGCTAAAATA +
Preference number: 3 (lower is better)
Translates to: IWHSLLIPCPAL*INKSHFTEAKI
Trigger: TATTTTAGCTTCTGTGAAGTGGGATTTATTGATCCAAAGTGCTGGACACGGTATTAGGAGGGAATGCCAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR TCA 72 bp GTTTTAACCTACTCAGGTTTCAATTCAAGGCTTACTTaGAACTGTTTCATCCTGTTACATTCTGTGCGTGGC +
Preference number: 3 (lower is better)
Translates to: VLTYSGFNSRLT*NCFILLHSVRG
Trigger: GCCACGCACAGAATGTAACAGGATGAAACAGTTTCAAGTAAGCCTTGAATTGAAACCTGAGTAGGTTAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR CCA 72 bp CAGATATCATATCTAGTAATAAGAACTGCATTATCGTaGTGGGCAATCCCATTTTCTGGAATGGTGTTTCCA +
Preference number: 3 (lower is better)
Translates to: QISYLVIRTALS*WAIPFSGMVFP
Trigger: TGGAAACACCATTCCAGAAAATGGGATTGCCCACCACGATAATGCAGTTCTTATTACTAGATATGATATCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR CCA 72 bp AAAGTTTTAATGGAAATCTCAGCTTTACTTGCACAATaGCAAGTTGGCCACAGTCTTTCAGCACTGAGTTTA +
Preference number: 3 (lower is better)
Translates to: KVLMEISALLAQ*QVGHSLSALSL
Trigger: TAAACTCAGTGCTGAAAGACTGTGGCCAACTTGCCATTGTGCAAGTAAAGCTGAGATTTCCATTAAAACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR-3UTR CAA 90 bp TTGGAAATCATATGTATCTCACGGGGTTTAATCATTAGGGTACATTTACCGTTCCAAGTTAACTGTTCTTaGAAAAGGCGCAAGGGAATT +
Preference number: 3 (lower is better)
Translates to: LEIICISRGLIIRVHLPFQVNCS*KRRKGI
Trigger: AATTCCCTTGCGCCTTTTCAAAGAACAGTTAACTTG...GAACGGTAAATGTACCCTAATGATTAAACCCCGTGAGATACATATGATTTCCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR CCA 72 bp ATATCATATCTAGTAATAAGAACTGCATTATCGTGGTaGGCAATCCCATTTTCTGGAATGGTGTTTCCATCA +
Preference number: 3 (lower is better)
Translates to: ISYLVIRTALSW*AIPFSGMVFPS
Trigger: TGATGGAAACACCATTCCAGAAAATGGGATTGCCCACCACGATAATGCAGTTCTTATTACTAGATATGATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CCA 90 bp TTCTGTGCGTGGCTCCCTCTAGAAAGGCACTCTGATGCTGCCCCGGGGGATGCCGTGCTGTGCAGTGCCTaGGGGATGGCCCTCACAATG +
Preference number: 4 (lower is better)
Translates to: FCAWLPLERHSDAAPGDAVLCSA*GMALTM
Trigger: CATTGTGAGGGCCATCCCCCAGGCACTGCACAGCAC...GGCATCCCCCGGGGCAGCATCAGAGTGCCTTTCTAGAGGGAGCCACGCACAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp TTCTGTGCGTGGCTCCCTCTAGAAAGGCACTCTGATGCTGCCCCGGGGGATGCCCTAAGGCATCCTGTGTaGTGGCAGCAAAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: FCAWLPLERHSDAAPGDALRHPV*WQQRAW
Trigger: CCAGGCCCTTTGCTGCCACCACACAGGATGCCTTAG...GGCATCCCCCGGGGCAGCATCAGAGTGCCTTTCTAGAGGGAGCCACGCACAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp GCAGCAAAGGGCCTGGTCCTTTGGTCTGTACCATACCCCAGGTCTGGTTTCTGCTCTAGAAAGGCACTCTaGTGCTGCCCCGGGGGATGC +
Preference number: 4 (lower is better)
Translates to: AAKGLVLWSVPYPRSGFCSRKAL*CCPGGC
Trigger: GCATCCCCCGGGGCAGCATCAGAGTGCCTTTCTAGA...GCAGAAACCAGACCTGGGGTATGGTACAGACCAAAGGACCAGGCCCTTTGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp AGGCAAGTACCACGGCCTGAACTGCAAAGCCGTCGCCGGAAAACATCAGAAGCTCCTGATGCAGAGCACTaGCCTTGTGCGCATCCCACC +
Preference number: 4 (lower is better)
Translates to: RQVPRPELQSRRRKTSEAPDAEH*PCAHPT
Trigger: GGTGGGATGCGCACAAGGGCAGTGCTCTGCATCAGG...AGCTTCTGATGTTTTCCGGCGACGGCTTTGCAGTTCAGGCCGTGGTACTTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR CAA 72 bp CAGCGGCCCAAACTGCAGCGGATGCGGACAGGAGGTTaGCTTTCCTCTGGACATTGTGCAGCTGGGAATGTC +
Preference number: 4 (lower is better)
Translates to: QRPKLQRMRTGG*LSSGHCAAGNV
Trigger: GACATTCCCAGCTGCACAATGTCCAGAGGAAAGCAAACCTCCTGTCCGCATCCGCTGCAGTTTGGGCCGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR TCA 90 bp TTCTGTGCGTGGCTCCCTCTAGAAAGGCACTCTGATGCTGCCCCGGGGGATGCCTCAATATTCCCAGTTTaGCACAGTGTCCCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: FCAWLPLERHSDAAPGDASIFPV*HSVPSA
Trigger: AGCTGAGGGGACACTGTGTCAAACTGGGAATATTGA...GGCATCCCCCGGGGCAGCATCAGAGTGCCTTTCTAGAGGGAGCCACGCACAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp TGTGCTTCCGTCCCCTCCACAGACTCGACATCTATCTTCCCTAGCATCAGATCCAGGCATCCTGTGTGGTaGCAGCAAAGGGCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: CASVPSTDSTSIFPSIRSRHPVW*QQRAWS
Trigger: GGACCAGGCCCTTTGCTGCCACCACACAGGATGCCT...GGATCTGATGCTAGGGAAGATAGATGTCGAGTCTGTGGAGGGGACGGAAGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR TCA 90 bp CTAAGGCATCCTGTGTGGTGGCAGCAAAGGGCCTGGTCCTTTGGTCTGTACCATAAGGTCCGATCTTCCTaGTGCAGAGCACTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: LRHPVWWQQRAWSFGLYHKVRSS*CRALPL
Trigger: CAAGGGCAGTGCTCTGCATCAGGAAGATCGGACCTT...ATGGTACAGACCAAAGGACCAGGCCCTTTGCTGCCACCACACAGGATGCCTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp AAGCTCAACACACGTGCAGCAATCCAAAGGGCAGAAGCCGTGCTGTGGCTGGGGTTCACACTGCTGCATTaGTGGAGGCCGAACAGTTTC +
Preference number: 4 (lower is better)
Translates to: KLNTRAAIQRAEAVLWLGFTLLH*WRPNSF
Trigger: GAAACTGTTCGGCCTCCATCAATGCAGCAGTGTGAA...CCCCAGCCACAGCACGGCTTCTGCCCTTTGGATTGCTGCACGTGTGTTGAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp TTCTGTGCGTGGCTCCCTCTAGAAAGGCACTCTGATGCTGCCCCGGGGGATGCCCCCAAATTCTGTTCTTaGAGCAGAACCATGACGATG +
Preference number: 4 (lower is better)
Translates to: FCAWLPLERHSDAAPGDAPKFCS*SRTMTM
Trigger: CATCGTCATGGTTCTGCTTCAAGAACAGAATTTGGG...GGCATCCCCCGGGGCAGCATCAGAGTGCCTTTCTAGAGGGAGCCACGCACAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp GTGGCAGCAAAGGGCCTGGTCCTTTGGTCTGTACCATACCCCAGGTCTGGTTTCCCAAACTGCAGCGGATaGGGACAGGAGGTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: VAAKGLVLWSVPYPRSGFPNCSG*GQEVCF
Trigger: AAAGCAAACCTCCTGTCCGCATCCGCTGCAGTTTGG...GAAACCAGACCTGGGGTATGGTACAGACCAAAGGACCAGGCCCTTTGCTGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp TGTCCTTGGCAGGTCTTACAACACATCTGTCTGAAGTATGCTCGACTGCAGAACGGCAGCGGCCCAAACTaGAGCGGATGCGGACAGGAG +
Preference number: 4 (lower is better)
Translates to: CPWQVLQHICLKYARLQNGSGPN*SGCGQE
Trigger: CTCCTGTCCGCATCCGCTGCAGTTTGGGCCGCTGCC...GTTCTGCAGTCGAGCATACTTCAGACAGATGTGTTGTAAGACCTGCCAAGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR GCA 90 bp TCTCCCTGTGTTGTTTGGATCTCTCCAATCTGGCATTCCCTCCTAATACCGTGTGGCAGCGGCCCAAACTaGAGCGGATGCGGACAGGAG +
Preference number: 4 (lower is better)
Translates to: SPCVVWISPIWHSLLIPCGSGPN*SGCGQE
Trigger: CTCCTGTCCGCATCCGCTGCAGTTTGGGCCGCTGCC...ACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAACAACACAGGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp TCTCTCGAAAATCTCGGGAACCCAAAGGGCATGGATCTGTGTTACAGGAGCGATCCCCGCAGGTCCTGCTaGACTCTCCCCATAGTGACC +
Preference number: 4 (lower is better)
Translates to: SLENLGNPKGMDLCYRSDPRRSC*TLPIVT
Trigger: GGTCACTATGGGGAGAGTGCAGCAGGACCTGCGGGG...ATCGCTCCTGTAACACAGATCCATGCCCTTTGGGTTCCCGAGATTTTCGAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR GCA 90 bp GCAGCAAAGGGCCTGGTCCTTTGGTCTGTACCATACCCCAGGTCTGGTTTCTGCCAATGGCATCACATGTaGTTCCGTCCCCTCCACAGA +
Preference number: 4 (lower is better)
Translates to: AAKGLVLWSVPYPRSGFCQWHHM*FRPLHR
Trigger: TCTGTGGAGGGGACGGAAGCACATGTGATGCCATTG...GCAGAAACCAGACCTGGGGTATGGTACAGACCAAAGGACCAGGCCCTTTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp GCAGCAAAGGGCCTGGTCCTTTGGTCTGTACCATACCCCAGGTCTGGTTTCTGCCGCAAGGGAATTCAGTaGTCGGGCCATACTACCCAT +
Preference number: 4 (lower is better)
Translates to: AAKGLVLWSVPYPRSGFCRKGIQ*SGHTTH
Trigger: ATGGGTAGTATGGCCCGAGCACTGAATTCCCTTGCG...GCAGAAACCAGACCTGGGGTATGGTACAGACCAAAGGACCAGGCCCTTTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp ACTTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTATTGTTACAAGGTGCTGTGCAGTaGCTGGGGGATGGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: TFGRSAMVAQPPLTMLLLQGAVQ*LGDGPH
Trigger: GTGAGGGCCATCCCCCAGGCACTGCACAGCACCTTG...TAACAATAGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp CCCTGTGTTGTTTGGATCTCTCCAATCTGGCATTCCCTCCTAATACCGTGTCCATCAGCCAAGGTGCTGTaGAGTGCCTGGGGGATGGCC +
Preference number: 4 (lower is better)
Translates to: PCVVWISPIWHSLLIPCPSAKVL*SAWGMA
Trigger: GGCCATCCCCCAGGCACTGCACAGCACCTTGGCTGA...TGGACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAACAACACAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp CGGGCCATACTACCCATGGGCTGTTTGCCCTTCACTGAATGGCTAAGACGGCACAATGAACCACTCAGGTaGGCAGGGCTCAGTGTTGCA +
Preference number: 4 (lower is better)
Translates to: RAILPMGCLPFTEWLRRHNEPLR*AGLSVA
Trigger: TGCAACACTGAGCCCTGCCCACCTGAGTGGTTCATT...GTGCCGTCTTAGCCATTCAGTGAAGGGCAAACAGCCCATGGGTAGTATGGCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp CTAAGGCATCCTGTGTGGTGGCAGCAAAGGGCCTGGTCCTTTGGTCTGTACCATCTCTCTGGCTTTCTGTaGGTCAGTGTCCTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: LRHPVWWQQRAWSFGLYHLSGFL*VSVLGR
Trigger: CCTGCCAAGGACACTGACCCACAGAAAGCCAGAGAG...ATGGTACAGACCAAAGGACCAGGCCCTTTGCTGCCACCACACAGGATGCCTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp GCAGCAAAGGGCCTGGTCCTTTGGTCTGTACCATACCCCAGGTCTGGTTTCTGCGCTAGGGCTGACCAGTaGTTACGTTTTCCACAGGGT +
Preference number: 4 (lower is better)
Translates to: AAKGLVLWSVPYPRSGFCARADQ*LRFPQG
Trigger: ACCCTGTGGAAAACGTAACCACTGGTCAGCCCTAGC...GCAGAAACCAGACCTGGGGTATGGTACAGACCAAAGGACCAGGCCCTTTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp AAGCTCAACACACGTGCAGCAATCCAAAGGGCAGAAGCCGTGCTGTGGCTGGGGATCATACACCTGACCTaGGGCCACAGCTGGATAAAG +
Preference number: 4 (lower is better)
Translates to: KLNTRAAIQRAEAVLWLGIIHLT*GHSWIK
Trigger: CTTTATCCAGCTGTGGCCCCAGGTCAGGTGTATGAT...CCCCAGCCACAGCACGGCTTCTGCCCTTTGGATTGCTGCACGTGTGTTGAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp ACTGTAGTCCAGCGTCTCCTCCTCAGAAGGTCCGATCTTCCTGATGCAGAGCACGGGCCATACTACCCATaGGCTGTTTGCCCTTCACTG +
Preference number: 4 (lower is better)
Translates to: TVVQRLLLRRSDLPDAEHGPYYP*AVCPSL
Trigger: CAGTGAAGGGCAAACAGCCCATGGGTAGTATGGCCC...GTGCTCTGCATCAGGAAGATCGGACCTTCTGAGGAGGAGACGCTGGACTACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CCA 90 bp GCTCACTACTTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTGGGCCATACTACCCATaGGCTGTTTGCCCTTCACTG +
Preference number: 4 (lower is better)
Translates to: AHYFWKVCHGGPASTDNAGPYYP*AVCPSL
Trigger: CAGTGAAGGGCAAACAGCCCATGGGTAGTATGGCCC...AGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAAGTAGTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp GCAGCAAAGGGCCTGGTCCTTTGGTCTGTACCATACCCCAGGTCTGGTTTCTGCTATTGGGGGTGGAAGTaGTGCCCTCTCTTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: AAKGLVLWSVPYPRSGFCYWGWK*CPLFLE
Trigger: TTCCAGGAAGAGAGGGCACCACTTCCACCCCCAATA...GCAGAAACCAGACCTGGGGTATGGTACAGACCAAAGGACCAGGCCCTTTGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381055.8
CDS-3UTR CCA 90 bp AAGCTCAACACACGTGCAGCAATCCAAAGGGCAGAAGCCGTGCTGTGGCTGGGGAAGACTTATTGGGGGTaGAAGTGGTGCCCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: KLNTRAAIQRAEAVLWLGKTYWG*KWCPLF
Trigger: GAAGAGAGGGCACCACTTCCACCCCCAATAAGTCTT...CCCCAGCCACAGCACGGCTTCTGCCCTTTGGATTGCTGCACGTGTGTTGAGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381055.8
3UTR CAA 72 bp CAGTCCAAAGCCACCCACTGTGGTGGACATGACTGGTaGTTGCAGGGCTCTTTTTCGACAGGCCGGTGTGTT +
Preference number: 4 (lower is better)
Translates to: QSKATHCGGHDW*LQGSFSTGRCV
Trigger: AACACACCGGCCTGTCGAAAAAGAGCCCTGCAACAACCAGTCATGTCCACCACAGTGGGTGGCTTTGGACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR CAA 72 bp GGCTGTTTGCCCTTCACTGAATGGCTAAGACGGCACTaGGGCTGGTCTTCTAAGGGCATCTTAGATCCGGGC +
Preference number: 4 (lower is better)
Translates to: GCLPFTEWLRRH*GWSSKGILDPG
Trigger: GCCCGGATCTAAGATGCCCTTAGAAGACCAGCCCAAGTGCCGTCTTAGCCATTCAGTGAAGGGCAAACAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp ACTTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTATTGTTATGTCCAAGGCCACACTaGGCAGAACACTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: TFGRSAMVAQPPLTMLLLCPRPH*AEHWPQ
Trigger: CTGGGGCCAGTGTTCTGCTCAGTGTGGCCTTGGACA...TAACAATAGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp ACAACCACTGTAGTCCAGCGTCTCCTCCTCAGAAGGTCCGATCTTCCTGATGCACTCGACTGCAGAACTTaGACTTCAGCACCAGTGGGC +
Preference number: 4 (lower is better)
Translates to: TTTVVQRLLLRRSDLPDALDCRT*TSAPVG
Trigger: GCCCACTGGTGCTGAAGTTCAAGTTCTGCAGTCGAG...TGCATCAGGAAGATCGGACCTTCTGAGGAGGAGACGCTGGACTACAGTGGTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR TCA 90 bp AAGCTCAACACACGTGCAGCAATCCAAAGGGCAGAAGCCGTGCTGTGGCTGGGGCTGGGTGGCTCTCTTTaGTGGATGCATTTCCATGAT +
Preference number: 4 (lower is better)
Translates to: KLNTRAAIQRAEAVLWLGLGGSL*WMHFHD
Trigger: ATCATGGAAATGCATCCATCAAAGAGAGCCACCCAG...CCCCAGCCACAGCACGGCTTCTGCCCTTTGGATTGCTGCACGTGTGTTGAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp GTGGCAGCAAAGGGCCTGGTCCTTTGGTCTGTACCATACCCCAGGTCTGGTTTCGGCAGGGCTCAGTGTTaGAGGCTCTTTGATTTTCAG +
Preference number: 4 (lower is better)
Translates to: VAAKGLVLWSVPYPRSGFGRAQC*RLFDFQ
Trigger: CTGAAAATCAAAGAGCCTGCAACACTGAGCCCTGCC...GAAACCAGACCTGGGGTATGGTACAGACCAAAGGACCAGGCCCTTTGCTGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp CCCTGTGTTGTTTGGATCTCTCCAATCTGGCATTCCCTCCTAATACCGTGTCCACCTGATGCAGAGCACTaGCCTTGTGCGCATCCCACC +
Preference number: 4 (lower is better)
Translates to: PCVVWISPIWHSLLIPCPPDAEH*PCAHPT
Trigger: GGTGGGATGCGCACAAGGGCAGTGCTCTGCATCAGG...TGGACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAACAACACAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp TTCTGTGCGTGGCTCCCTCTAGAAAGGCACTCTGATGCTGCCCCGGGGGATGCCAACCTATGCCTAAAATaGCACAGAAACTGCCCATCT +
Preference number: 4 (lower is better)
Translates to: FCAWLPLERHSDAAPGDANLCLK*HRNCPS
Trigger: AGATGGGCAGTTTCTGTGGCATTTTAGGCATAGGTT...GGCATCCCCCGGGGCAGCATCAGAGTGCCTTTCTAGAGGGAGCCACGCACAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp AAGCTCAACACACGTGCAGCAATCCAAAGGGCAGAAGCCGTGCTGTGGCTGGGGTCCTGGACCACATTTTaGAGTACACTCAGACCAGTC +
Preference number: 4 (lower is better)
Translates to: KLNTRAAIQRAEAVLWLGSWTTF*STLRPV
Trigger: GACTGGTCTGAGTGTACTCCAAAATGTGGTCCAGGA...CCCCAGCCACAGCACGGCTTCTGCCCTTTGGATTGCTGCACGTGTGTTGAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp TGTGCTTCCGTCCCCTCCACAGACTCGACATCTATCTTCCCTAGCATCAGATCCCCCCCATCTATGCTCTaGGGCCAAGTGCCAAAAGGA +
Preference number: 4 (lower is better)
Translates to: CASVPSTDSTSIFPSIRSPPSML*GQVPKG
Trigger: TCCTTTTGGCACTTGGCCCCAGAGCATAGATGGGGG...GGATCTGATGCTAGGGAAGATAGATGTCGAGTCTGTGGAGGGGACGGAAGCACA
54% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CCA 90 bp GCAGCAAAGGGCCTGGTCCTTTGGTCTGTACCATACCCCAGGTCTGGTTTCTGCACCACCTCCTGTCTTTaGACACCTCCAGCACAAGTA +
Preference number: 4 (lower is better)
Translates to: AAKGLVLWSVPYPRSGFCTTSCL*TPPAQV
Trigger: TACTTGTGCTGGAGGTGTCCAAAGACAGGAGGTGGT...GCAGAAACCAGACCTGGGGTATGGTACAGACCAAAGGACCAGGCCCTTTGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp GCTCACTACTTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTGCAAAAGGGTCTGCCTaGTTACCGAGCCAGTCTATC +
Preference number: 4 (lower is better)
Translates to: AHYFWKVCHGGPASTDNAAKGSA*LPSQSI
Trigger: GATAGACTGGCTCGGTAACCAGGCAGACCCTTTTGC...AGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAAGTAGTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp CGGGCCATACTACCCATGGGCTGTTTGCCCTTCACTGAATGGCTAAGACGGCACGTAGCTCACTACTTTTaGAAGGTCTGCCATGGTGGC +
Preference number: 4 (lower is better)
Translates to: RAILPMGCLPFTEWLRRHVAHYF*KVCHGG
Trigger: GCCACCATGGCAGACCTTCCAAAAGTAGTGAGCTAC...GTGCCGTCTTAGCCATTCAGTGAAGGGCAAACAGCCCATGGGTAGTATGGCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp GTGGCAGCAAAGGGCCTGGTCCTTTGGTCTGTACCATACCCCAGGTCTGGTTTCGGGTACCAGTTTCCCTaGGGTTCCCTAAGTAGTCTA +
Preference number: 4 (lower is better)
Translates to: VAAKGLVLWSVPYPRSGFGYQFP*GSLSSL
Trigger: TAGACTACTTAGGGAACCCCAGGGAAACTGGTACCC...GAAACCAGACCTGGGGTATGGTACAGACCAAAGGACCAGGCCCTTTGCTGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR CAA 72 bp CCCTCAGCTGCTGGAATACTGTTGGTGACACAGCGGTaGCTTTTGCTGAGACACCAGAGCTCTCTACACACC +
Preference number: 4 (lower is better)
Translates to: PSAAGILLVTQR*LLLRHQSSLHT
Trigger: GGTGTGTAGAGAGCTCTGGTGTCTCAGCAAAAGCAACCGCTGTGTCACCAACAGTATTCCAGCAGCTGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR TCA 90 bp GTTTGGATCTCTCCAATCTGGCATTCCCTCCTAATACCGTGTCCAGCACTTTGGCCACTGTGGTGGACATaGCTGGTTGTTGCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: VWISPIWHSLLIPCPALWPLWWT*LVVAGL
Trigger: GAGCCCTGCAACAACCAGTCATGTCCACCACAGTGG...CCAAAGTGCTGGACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp GCTCACTACTTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTCCGTTCAATGCTCACTaGTCTCTTCTGTCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: AHYFWKVCHGGPASTDNAPFNAH*SLLSVV
Trigger: CACCACAGACAGAAGAGATCAGTGAGCATTGAACGG...AGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAAGTAGTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp AAGCTCAACACACGTGCAGCAATCCAAAGGGCAGAAGCCGTGCTGTGGCTGGGGAGTTTTGCTGCTTCATaGCCTTTCGTCCCACAAGAA +
Preference number: 4 (lower is better)
Translates to: KLNTRAAIQRAEAVLWLGSFAAS*PFVPQE
Trigger: TTCTTGTGGGACGAAAGGTCATGAAGCAGCAAAACT...CCCCAGCCACAGCACGGCTTCTGCCCTTTGGATTGCTGCACGTGTGTTGAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp GTTTGGATCTCTCCAATCTGGCATTCCCTCCTAATACCGTGTCCAGCACTTTGGTCAGCATCATACACCTaGCCTGGGGCCACAGCTGGA +
Preference number: 4 (lower is better)
Translates to: VWISPIWHSLLIPCPALWSASYT*PGATAG
Trigger: TCCAGCTGTGGCCCCAGGTCAGGTGTATGATGCTGA...CCAAAGTGCTGGACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp AAGCTCAACACACGTGCAGCAATCCAAAGGGCAGAAGCCGTGCTGTGGCTGGGGCCAGGATGTGAAACTTaGAGATGGGGAAAATACGAG +
Preference number: 4 (lower is better)
Translates to: KLNTRAAIQRAEAVLWLGPGCET*RWGKYE
Trigger: CTCGTATTTTCCCCATCTTCAAGTTTCACATCCTGG...CCCCAGCCACAGCACGGCTTCTGCCCTTTGGATTGCTGCACGTGTGTTGAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp AGGCAAGTACCACGGCCTGAACTGCAAAGCCGTCGCCGGAAAACATCAGAAGCTGGCAGGGCTCAGTGTTaGAGGCTCTTTGATTTTCAG +
Preference number: 4 (lower is better)
Translates to: RQVPRPELQSRRRKTSEAGRAQC*RLFDFQ
Trigger: CTGAAAATCAAAGAGCCTGCAACACTGAGCCCTGCC...AGCTTCTGATGTTTTCCGGCGACGGCTTTGCAGTTCAGGCCGTGGTACTTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR GCA 90 bp CGGGCCATACTACCCATGGGCTGTTTGCCCTTCACTGAATGGCTAAGACGGCACAATGTTCAATGTCTTTaGGGCCATGGTAGCCCACCA +
Preference number: 4 (lower is better)
Translates to: RAILPMGCLPFTEWLRRHNVQCL*GHGSPP
Trigger: TGGTGGGCTACCATGGCCGCAAAGACATTGAACATT...GTGCCGTCTTAGCCATTCAGTGAAGGGCAAACAGCCCATGGGTAGTATGGCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp GCTCACTACTTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTACATTGGCGGGAGGTTaGTCCATACTGGAAACGACA +
Preference number: 4 (lower is better)
Translates to: AHYFWKVCHGGPASTDNATLAGG*SILETT
Trigger: TGTCGTTTCCAGTATGGAGCAACCTCCCGCCAATGT...AGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAAGTAGTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp AGGCAAGTACCACGGCCTGAACTGCAAAGCCGTCGCCGGAAAACATCAGAAGCTGCATTTTGTTCTCAGTaGTGGGGCACATCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: RQVPRPELQSRRRKTSEAAFCSQ*WGTSQK
Trigger: CTTCTGGGATGTGCCCCAGCACTGAGAACAAAATGC...AGCTTCTGATGTTTTCCGGCGACGGCTTTGCAGTTCAGGCCGTGGTACTTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR GCA 90 bp GCTCACTACTTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTGCTATCACTCTGAGATaGTGCCTTTGCAAACCCCCT +
Preference number: 4 (lower is better)
Translates to: AHYFWKVCHGGPASTDNAAITLR*CLCKPP
Trigger: AGGGGGTTTGCAAAGGCAGCATCTCAGAGTGATAGC...AGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAAGTAGTGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381055.8
CDS-3UTR CCA 90 bp AAGCTCAACACACGTGCAGCAATCCAAAGGGCAGAAGCCGTGCTGTGGCTGGGGCCGATGCTTGAATCCTaGACCACATTTTGGAGTACA +
Preference number: 4 (lower is better)
Translates to: KLNTRAAIQRAEAVLWLGPMLES*TTFWST
Trigger: TGTACTCCAAAATGTGGTCCAGGATTCAAGCATCGG...CCCCAGCCACAGCACGGCTTCTGCCCTTTGGATTGCTGCACGTGTGTTGAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp GCTCACTACTTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTACAAGGCACTCTCTCTaGCTTTCTGTGGGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: AHYFWKVCHGGPASTDNATRHSL*LSVGQC
Trigger: ACACTGACCCACAGAAAGCCAGAGAGAGTGCCTTGT...AGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAAGTAGTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp CTAAGGCATCCTGTGTGGTGGCAGCAAAGGGCCTGGTCCTTTGGTCTGTACCATATCATACACCTGACCTaGGGCCACAGCTGGATAAAG +
Preference number: 4 (lower is better)
Translates to: LRHPVWWQQRAWSFGLYHIIHLT*GHSWIK
Trigger: CTTTATCCAGCTGTGGCCCCAGGTCAGGTGTATGAT...ATGGTACAGACCAAAGGACCAGGCCCTTTGCTGCCACCACACAGGATGCCTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp ACTGTAGTCCAGCGTCTCCTCCTCAGAAGGTCCGATCTTCCTGATGCAGAGCACACCACCTCCTGTCTTTaGACACCTCCAGCACAAGTA +
Preference number: 4 (lower is better)
Translates to: TVVQRLLLRRSDLPDAEHTTSCL*TPPAQV
Trigger: TACTTGTGCTGGAGGTGTCCAAAGACAGGAGGTGGT...GTGCTCTGCATCAGGAAGATCGGACCTTCTGAGGAGGAGACGCTGGACTACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CCA 90 bp ACTGTAGTCCAGCGTCTCCTCCTCAGAAGGTCCGATCTTCCTGATGCAGAGCACGGGTACCAGTTTCCCTaGGGTTCCCTAAGTAGTCTA +
Preference number: 4 (lower is better)
Translates to: TVVQRLLLRRSDLPDAEHGYQFP*GSLSSL
Trigger: TAGACTACTTAGGGAACCCCAGGGAAACTGGTACCC...GTGCTCTGCATCAGGAAGATCGGACCTTCTGAGGAGGAGACGCTGGACTACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CCA 90 bp CTAAGGCATCCTGTGTGGTGGCAGCAAAGGGCCTGGTCCTTTGGTCTGTACCATAGGACTTTATCCCAGTaGCAGATACTGCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: LRHPVWWQQRAWSFGLYHRTLSQ*QILLPG
Trigger: ACCTGGGAGCAGTATCTGCCACTGGGATAAAGTCCT...ATGGTACAGACCAAAGGACCAGGCCCTTTGCTGCCACCACACAGGATGCCTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp CGGGCCATACTACCCATGGGCTGTTTGCCCTTCACTGAATGGCTAAGACGGCACTCCCCATATTTACATTaGCGGGAGGTTGCTCCATAC +
Preference number: 4 (lower is better)
Translates to: RAILPMGCLPFTEWLRRHSPYLH*REVAPY
Trigger: GTATGGAGCAACCTCCCGCCAATGTAAATATGGGGA...GTGCCGTCTTAGCCATTCAGTGAAGGGCAAACAGCCCATGGGTAGTATGGCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381055.8
3UTR CAA 72 bp CATTCTCCATTGATGCAGATATCCAGTGAATCCGCATaGCACTGGGTCCCATCGATCACCGCAGGAGCACGT +
Preference number: 4 (lower is better)
Translates to: HSPLMQISSESA*HWVPSITAGAR
Trigger: ACGTGCTCCTGCGGTGATCGATGGGACCCAGTGCAATGCGGATTCACTGGATATCTGCATCAATGGAGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR CAA 72 bp TCCAAAGCCACCCACTGTGGTGGACATGACTGGTTGTaGCAGGGCTCTTTTTCGACAGGCCGGTGTGTTAAA +
Preference number: 4 (lower is better)
Translates to: SKATHCGGHDWL*QGSFSTGRCVK
Trigger: TTTAACACACCGGCCTGTCGAAAAAGAGCCCTGCAACAACCAGTCATGTCCACCACAGTGGGTGGCTTTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR TCA 90 bp CGGGCCATACTACCCATGGGCTGTTTGCCCTTCACTGAATGGCTAAGACGGCACATTTCCATGATGAAATaGCAAGGCACTCTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: RAILPMGCLPFTEWLRRHISMMK*QGTLSG
Trigger: GCCAGAGAGAGTGCCTTGTCATTTCATCATGGAAAT...GTGCCGTCTTAGCCATTCAGTGAAGGGCAAACAGCCCATGGGTAGTATGGCCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp AAGCTCAACACACGTGCAGCAATCCAAAGGGCAGAAGCCGTGCTGTGGCTGGGGACTATGAAATTCCGATaGAGCCATGATGAGGCTCAA +
Preference number: 4 (lower is better)
Translates to: KLNTRAAIQRAEAVLWLGTMKFR*SHDEAQ
Trigger: TTGAGCCTCATCATGGCTTCATCGGAATTTCATAGT...CCCCAGCCACAGCACGGCTTCTGCCCTTTGGATTGCTGCACGTGTGTTGAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp CTAAGGCATCCTGTGTGGTGGCAGCAAAGGGCCTGGTCCTTTGGTCTGTACCATTGCAATGGTAAAAGCTaGACCCAGGCCAATGTCTTC +
Preference number: 4 (lower is better)
Translates to: LRHPVWWQQRAWSFGLYHCNGKS*TQANVF
Trigger: GAAGACATTGGCCTGGGTTCAGCTTTTACCATTGCA...ATGGTACAGACCAAAGGACCAGGCCCTTTGCTGCCACCACACAGGATGCCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp ACAAACTGCAAAAGGGTCTGCCTGGTTACCGAGCCAGTCTATCTTTTGCATGGTTCAGCATCATACACCTaGCCTGGGGCCACAGCTGGA +
Preference number: 4 (lower is better)
Translates to: TNCKRVCLVTEPVYLLHGSASYT*PGATAG
Trigger: TCCAGCTGTGGCCCCAGGTCAGGTGTATGATGCTGA...ACCATGCAAAAGATAGACTGGCTCGGTAACCAGGCAGACCCTTTTGCAGTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp GTTTGGATCTCTCCAATCTGGCATTCCCTCCTAATACCGTGTCCAGCACTTTGGGCCTCCCCTGGGCAGTaGATCATTGAAGAACCCTTC +
Preference number: 4 (lower is better)
Translates to: VWISPIWHSLLIPCPALWASPGQ*IIEEPF
Trigger: GAAGGGTTCTTCAATGATTCACTGCCCAGGGGAGGC...CCAAAGTGCTGGACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp AAGCTCAACACACGTGCAGCAATCCAAAGGGCAGAAGCCGTGCTGTGGCTGGGGACAGTCTTTCAGCACTaGGTTTATAGACTTGCACAG +
Preference number: 4 (lower is better)
Translates to: KLNTRAAIQRAEAVLWLGTVFQH*VYRLAQ
Trigger: CTGTGCAAGTCTATAAACTCAGTGCTGAAAGACTGT...CCCCAGCCACAGCACGGCTTCTGCCCTTTGGATTGCTGCACGTGTGTTGAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp TGTGCTTCCGTCCCCTCCACAGACTCGACATCTATCTTCCCTAGCATCAGATCCAGATCCGGGCCCTGGTaGTTCCTCTTGTATCATCAA +
Preference number: 4 (lower is better)
Translates to: CASVPSTDSTSIFPSIRSRSGPW*FLLYHQ
Trigger: TTGATGATACAAGAGGAATCACCAGGGCCCGGATCT...GGATCTGATGCTAGGGAAGATAGATGTCGAGTCTGTGGAGGGGACGGAAGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR TCA 90 bp CGGGCCATACTACCCATGGGCTGTTTGCCCTTCACTGAATGGCTAAGACGGCACTGGCCCAGCCTCCACTaGCAATGCTATTGTTATTAT +
Preference number: 4 (lower is better)
Translates to: RAILPMGCLPFTEWLRRHWPSLH*QCYCYY
Trigger: ATAATAACAATAGCATTGTCAGTGGAGGCTGGGCCA...GTGCCGTCTTAGCCATTCAGTGAAGGGCAAACAGCCCATGGGTAGTATGGCCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp GCAGCAAAGGGCCTGGTCCTTTGGTCTGTACCATACCCCAGGTCTGGTTTCTGCCATCACAAGTCTTGCTaGATTCCAACCAATCCCCAA +
Preference number: 4 (lower is better)
Translates to: AAKGLVLWSVPYPRSGFCHHKSC*IPTNPQ
Trigger: TTGGGGATTGGTTGGAATGCAGCAAGACTTGTGATG...GCAGAAACCAGACCTGGGGTATGGTACAGACCAAAGGACCAGGCCCTTTGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp AGGCAAGTACCACGGCCTGAACTGCAAAGCCGTCGCCGGAAAACATCAGAAGCTCACCATCACAAGTCTTaGTGCATTCCAACCAATCCC +
Preference number: 4 (lower is better)
Translates to: RQVPRPELQSRRRKTSEAHHHKS*CIPTNP
Trigger: GGGATTGGTTGGAATGCAGCAAGACTTGTGATGGTG...AGCTTCTGATGTTTTCCGGCGACGGCTTTGCAGTTCAGGCCGTGGTACTTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR GCA 90 bp TTTAGTAGGACTTTATCCCAGTGGCAGATACTGCTCCCAGGTGTAGGGTACCAGAGAGCACTGCCCTTGTaGGCATCCCACCATCACAAG +
Preference number: 4 (lower is better)
Translates to: FSRTLSQWQILLPGVGYQRALPL*ASHHHK
Trigger: CTTGTGATGGTGGGATGCGCACAAGGGCAGTGCTCT...CTGGTACCCTACACCTGGGAGCAGTATCTGCCACTGGGATAAAGTCCTACTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp ACAACCACTGTAGTCCAGCGTCTCCTCCTCAGAAGGTCCGATCTTCCTGATGCATGCGGACAGGAGGTTTaGTTTCCTCTGGACATTGTG +
Preference number: 4 (lower is better)
Translates to: TTTVVQRLLLRRSDLPDACGQEV*FPLDIV
Trigger: CACAATGTCCAGAGGAAAGCAAACCTCCTGTCCGCA...TGCATCAGGAAGATCGGACCTTCTGAGGAGGAGACGCTGGACTACAGTGGTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR GCA 90 bp CTAAGGCATCCTGTGTGGTGGCAGCAAAGGGCCTGGTCCTTTGGTCTGTACCATTTGCTTTCACACTGCTaGATTGATGGAGGCCGAACA +
Preference number: 4 (lower is better)
Translates to: LRHPVWWQQRAWSFGLYHLLSHC*IDGGRT
Trigger: TGTTCGGCCTCCATCAATGCAGCAGTGTGAAAGCAA...ATGGTACAGACCAAAGGACCAGGCCCTTTGCTGCCACCACACAGGATGCCTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp GTGGCAGCAAAGGGCCTGGTCCTTTGGTCTGTACCATACCCCAGGTCTGGTTTCAACTTAGATACTGCCTaGTGTGGATCAATAGGGTCC +
Preference number: 4 (lower is better)
Translates to: VAAKGLVLWSVPYPRSGFNLDTA*CGSIGS
Trigger: GGACCCTATTGATCCACAGCAGGCAGTATCTAAGTT...GAAACCAGACCTGGGGTATGGTACAGACCAAAGGACCAGGCCCTTTGCTGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp GCAGCAAAGGGCCTGGTCCTTTGGTCTGTACCATACCCCAGGTCTGGTTTCTGCCACCATCATTTTGTCTaGCACTACCAATGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: AAKGLVLWSVPYPRSGFCHHHFV*HYQCLH
Trigger: GTGGAGACATTGGTAGTGGCAGACAAAATGATGGTG...GCAGAAACCAGACCTGGGGTATGGTACAGACCAAAGGACCAGGCCCTTTGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp TTCTGTGCGTGGCTCCCTCTAGAAAGGCACTCTGATGCTGCCCCGGGGGATGCCTCTAGTAATAAGAACTaGATTATCGTGGTGGGCAAT +
Preference number: 4 (lower is better)
Translates to: FCAWLPLERHSDAAPGDASSNKN*IIVVGN
Trigger: ATTGCCCACCACGATAATGCAGTTCTTATTACTAGA...GGCATCCCCCGGGGCAGCATCAGAGTGCCTTTCTAGAGGGAGCCACGCACAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp AAGCTCAACACACGTGCAGCAATCCAAAGGGCAGAAGCCGTGCTGTGGCTGGGGAGCTGCCATAAGTTTTaGTGCTTCATGACCTTTCGT +
Preference number: 4 (lower is better)
Translates to: KLNTRAAIQRAEAVLWLGSCHKF*CFMTFR
Trigger: ACGAAAGGTCATGAAGCAGCAAAACTTATGGCAGCT...CCCCAGCCACAGCACGGCTTCTGCCCTTTGGATTGCTGCACGTGTGTTGAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp ATCCGGGCCCTGGTGATTCCTCTTGTATCATCAATAGCTCTCTCTGGAAGGCTCAACTGCAAAAGGGTCTaGCTGGTTACCGAGCCAGTC +
Preference number: 4 (lower is better)
Translates to: IRALVIPLVSSIALSGRLNCKRV*LVTEPV
Trigger: GACTGGCTCGGTAACCAGGCAGACCCTTTTGCAGTT...GAGCCTTCCAGAGAGAGCTATTGATGATACAAGAGGAATCACCAGGGCCCGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp ACTGTAGTCCAGCGTCTCCTCCTCAGAAGGTCCGATCTTCCTGATGCAGAGCACTCCTGTTACATTCTGTaGGTGGCTCCCTCTAGAAAG +
Preference number: 4 (lower is better)
Translates to: TVVQRLLLRRSDLPDAEHSCYIL*VAPSRK
Trigger: CTTTCTAGAGGGAGCCACGCACAGAATGTAACAGGA...GTGCTCTGCATCAGGAAGATCGGACCTTCTGAGGAGGAGACGCTGGACTACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CCA 90 bp AGGCAAGTACCACGGCCTGAACTGCAAAGCCGTCGCCGGAAAACATCAGAAGCTTCCTGGACCACATTTTaGAGTACACTCAGACCAGTC +
Preference number: 4 (lower is better)
Translates to: RQVPRPELQSRRRKTSEASWTTF*STLRPV
Trigger: GACTGGTCTGAGTGTACTCCAAAATGTGGTCCAGGA...AGCTTCTGATGTTTTCCGGCGACGGCTTTGCAGTTCAGGCCGTGGTACTTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CCA 90 bp GTGGCAGCAAAGGGCCTGGTCCTTTGGTCTGTACCATACCCCAGGTCTGGTTTCCCGTGTCCAGCACTTTaGATCAATAAATCCCACTTC +
Preference number: 4 (lower is better)
Translates to: VAAKGLVLWSVPYPRSGFPCPAL*INKSHF
Trigger: GAAGTGGGATTTATTGATCCAAAGTGCTGGACACGG...GAAACCAGACCTGGGGTATGGTACAGACCAAAGGACCAGGCCCTTTGCTGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp CGGGCCATACTACCCATGGGCTGTTTGCCCTTCACTGAATGGCTAAGACGGCACAGATACTGCCTGCTGTaGATCAATAGGGTCCATACT +
Preference number: 4 (lower is better)
Translates to: RAILPMGCLPFTEWLRRHRYCLL*INRVHT
Trigger: AGTATGGACCCTATTGATCCACAGCAGGCAGTATCT...GTGCCGTCTTAGCCATTCAGTGAAGGGCAAACAGCCCATGGGTAGTATGGCCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp CGGGCCATACTACCCATGGGCTGTTTGCCCTTCACTGAATGGCTAAGACGGCACAAATCATGTTTCCACTaGGGTCCATCTTTCCCCCAA +
Preference number: 4 (lower is better)
Translates to: RAILPMGCLPFTEWLRRHKSCFH*GPSFPQ
Trigger: TTGGGGGAAAGATGGACCCCAGTGGAAACATGATTT...GTGCCGTCTTAGCCATTCAGTGAAGGGCAAACAGCCCATGGGTAGTATGGCCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp GCAGCAAAGGGCCTGGTCCTTTGGTCTGTACCATACCCCAGGTCTGGTTTCTGCGACTTGTCTGCATGGTaGTTTATCTCCAAGTTTGGC +
Preference number: 4 (lower is better)
Translates to: AAKGLVLWSVPYPRSGFCDLSAW*FISKFG
Trigger: GCCAAACTTGGAGATAAACCACCATGCAGACAAGTC...GCAGAAACCAGACCTGGGGTATGGTACAGACCAAAGGACCAGGCCCTTTGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp GCTCACTACTTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTCACCCATATTTACATTaGCGGGAGGTTGCTCCATAC +
Preference number: 4 (lower is better)
Translates to: AHYFWKVCHGGPASTDNAHPYLH*REVAPY
Trigger: GTATGGAGCAACCTCCCGCCAATGTAAATATGGGTG...AGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAAGTAGTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CCA 90 bp TTTAGTAGGACTTTATCCCAGTGGCAGATACTGCTCCCAGGTGTAGGGTACCAGAAGGGCCTGGTCCTTTaGTCTGTACCATACCCCAGG +
Preference number: 4 (lower is better)
Translates to: FSRTLSQWQILLPGVGYQKGLVL*SVPYPR
Trigger: CCTGGGGTATGGTACAGACCAAAGGACCAGGCCCTT...CTGGTACCCTACACCTGGGAGCAGTATCTGCCACTGGGATAAAGTCCTACTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp GCAGCAAAGGGCCTGGTCCTTTGGTCTGTACCATACCCCAGGTCTGGTTTCTGCTACACCTGTGTACAATaGGGAGGCATTTTGGACACA +
Preference number: 4 (lower is better)
Translates to: AAKGLVLWSVPYPRSGFCYTCVQ*GGILDT
Trigger: TGTGTCCAAAATGCCTCCCCATTGTACACAGGTGTA...GCAGAAACCAGACCTGGGGTATGGTACAGACCAAAGGACCAGGCCCTTTGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp GCAGCAAAGGGCCTGGTCCTTTGGTCTGTACCATACCCCAGGTCTGGTTTCTGCTGTCCACAGCAAACCTaGGAGTTGTTTAGATTGGCT +
Preference number: 4 (lower is better)
Translates to: AAKGLVLWSVPYPRSGFCCPQQT*ELFRLA
Trigger: AGCCAATCTAAACAACTCCCAGGTTTGCTGTGGACA...GCAGAAACCAGACCTGGGGTATGGTACAGACCAAAGGACCAGGCCCTTTGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp AGGCAAGTACCACGGCCTGAACTGCAAAGCCGTCGCCGGAAAACATCAGAAGCTTACAACACATCTGTCTaGAGTATGCTCGACTGCAGA +
Preference number: 4 (lower is better)
Translates to: RQVPRPELQSRRRKTSEAYNTSV*SMLDCR
Trigger: TCTGCAGTCGAGCATACTTCAGACAGATGTGTTGTA...AGCTTCTGATGTTTTCCGGCGACGGCTTTGCAGTTCAGGCCGTGGTACTTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR TCA 90 bp ACAACCACTGTAGTCCAGCGTCTCCTCCTCAGAAGGTCCGATCTTCCTGATGCAAGCCTGTGGTCACTATaGAATTCCGATGAAGCCATG +
Preference number: 4 (lower is better)
Translates to: TTTVVQRLLLRRSDLPDASLWSL*NSDEAM
Trigger: CATGGCTTCATCGGAATTTCATAGTGACCACAGGCT...TGCATCAGGAAGATCGGACCTTCTGAGGAGGAGACGCTGGACTACAGTGGTTGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR TCA 90 bp AGGCAAGTACCACGGCCTGAACTGCAAAGCCGTCGCCGGAAAACATCAGAAGCTCTCTTGAGAACTGTATaGAAGCCTGTGGTCACTATG +
Preference number: 4 (lower is better)
Translates to: RQVPRPELQSRRRKTSEALLRTV*KPVVTM
Trigger: CATAGTGACCACAGGCTTTCATACAGTTCTCAAGAG...AGCTTCTGATGTTTTCCGGCGACGGCTTTGCAGTTCAGGCCGTGGTACTTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR TCA 90 bp GTGGCAGCAAAGGGCCTGGTCCTTTGGTCTGTACCATACCCCAGGTCTGGTTTCGCTTGCATTCTCCATTaGTGCAGATATCCAGTGAAT +
Preference number: 4 (lower is better)
Translates to: VAAKGLVLWSVPYPRSGFACILH*CRYPVN
Trigger: ATTCACTGGATATCTGCATCAATGGAGAATGCAAGC...GAAACCAGACCTGGGGTATGGTACAGACCAAAGGACCAGGCCCTTTGCTGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp GCTCACTACTTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTTGGCCCAGCCTCCACTaGCAATGCTATTGTTATTAT +
Preference number: 4 (lower is better)
Translates to: AHYFWKVCHGGPASTDNAWPSLH*QCYCYY
Trigger: ATAATAACAATAGCATTGTCAGTGGAGGCTGGGCCA...AGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAAGTAGTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp GCTCACTACTTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTGCAGCAAAGTTTTGTTaGAGTAGCCCTAGATCTCAC +
Preference number: 4 (lower is better)
Translates to: AHYFWKVCHGGPASTDNAAAKFC*SSPRSH
Trigger: GTGAGATCTAGGGCTACTTCAACAAAACTTTGCTGC...AGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAAGTAGTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381055.8
CDS-3UTR GCA 90 bp TCTCCCTGTGTTGTTTGGATCTCTCCAATCTGGCATTCCCTCCTAATACCGTGTAGAGCACTGCCCTTGTaGGCATCCCACCATCACAAG +
Preference number: 4 (lower is better)
Translates to: SPCVVWISPIWHSLLIPCRALPL*ASHHHK
Trigger: CTTGTGATGGTGGGATGCGCACAAGGGCAGTGCTCT...ACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAACAACACAGGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp GCTCACTACTTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTTTCCTCTGGACATTGTaGAGCTGGGAATGTCTTAGA +
Preference number: 4 (lower is better)
Translates to: AHYFWKVCHGGPASTDNAFLWTL*SWECLR
Trigger: TCTAAGACATTCCCAGCTGCACAATGTCCAGAGGAA...AGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAAGTAGTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp ACTTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTATTGTTACCAAACTGCAGCGGATaGGGACAGGAGGTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: TFGRSAMVAQPPLTMLLLPNCSG*GQEVCF
Trigger: AAAGCAAACCTCCTGTCCGCATCCGCTGCAGTTTGG...TAACAATAGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp ACAACCACTGTAGTCCAGCGTCTCCTCCTCAGAAGGTCCGATCTTCCTGATGCATTGCTTTCACACTGCTaGATTGATGGAGGCCGAACA +
Preference number: 4 (lower is better)
Translates to: TTTVVQRLLLRRSDLPDALLSHC*IDGGRT
Trigger: TGTTCGGCCTCCATCAATGCAGCAGTGTGAAAGCAA...TGCATCAGGAAGATCGGACCTTCTGAGGAGGAGACGCTGGACTACAGTGGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR GCA 90 bp GCTCACTACTTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTTCAGACAATAGAGATTaGACTGGACGACTCACGTAC +
Preference number: 4 (lower is better)
Translates to: AHYFWKVCHGGPASTDNASDNRD*TGRLTY
Trigger: GTACGTGAGTCGTCCAGTGCAATCTCTATTGTCTGA...AGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAAGTAGTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp CGGGCCATACTACCCATGGGCTGTTTGCCCTTCACTGAATGGCTAAGACGGCACAGCTGCCATAAGTTTTaGTGCTTCATGACCTTTCGT +
Preference number: 4 (lower is better)
Translates to: RAILPMGCLPFTEWLRRHSCHKF*CFMTFR
Trigger: ACGAAAGGTCATGAAGCAGCAAAACTTATGGCAGCT...GTGCCGTCTTAGCCATTCAGTGAAGGGCAAACAGCCCATGGGTAGTATGGCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp ATCCGGGCCCTGGTGATTCCTCTTGTATCATCAATAGCTCTCTCTGGAAGGCTCTGCTCTGGGGCCAAGTaGCAAAAGGAACACAATCTC +
Preference number: 4 (lower is better)
Translates to: IRALVIPLVSSIALSGRLCSGAK*QKEHNL
Trigger: GAGATTGTGTTCCTTTTGGCACTTGGCCCCAGAGCA...GAGCCTTCCAGAGAGAGCTATTGATGATACAAGAGGAATCACCAGGGCCCGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp ACATCTGGAACTCATCGTAATTGTCAACAAACTGCAAAAGGGTCTGCCTGGTTACCCCGCAGGTCCTGCTaGACTCTCCCCATAGTGACC +
Preference number: 4 (lower is better)
Translates to: TSGTHRNCQQTAKGSAWLPRRSC*TLPIVT
Trigger: GGTCACTATGGGGAGAGTGCAGCAGGACCTGCGGGG...TAACCAGGCAGACCCTTTTGCAGTTTGTTGACAATTACGATGAGTTCCAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp TTACTTGAAACTGTTTCATCCTGTTACATTCTGTGCGTGGCTCCCTCTAGAAAGCTCCCCCGCAGGTCCTaGTGCACTCTCCCCATAGTG +
Preference number: 4 (lower is better)
Translates to: LLETVSSCYILCVAPSRKLPRRS*CTLPIV
Trigger: CACTATGGGGAGAGTGCAGCAGGACCTGCGGGGGAG...CTTTCTAGAGGGAGCCACGCACAGAATGTAACAGGATGAAACAGTTTCAAGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp AGGCAAGTACCACGGCCTGAACTGCAAAGCCGTCGCCGGAAAACATCAGAAGCTTCATCAAGAACCTGCTaGAAGCTACACGTGTTCAAG +
Preference number: 4 (lower is better)
Translates to: RQVPRPELQSRRRKTSEASSRTC*KLHVFK
Trigger: CTTGAACACGTGTAGCTTGCAGCAGGTTCTTGATGA...AGCTTCTGATGTTTTCCGGCGACGGCTTTGCAGTTCAGGCCGTGGTACTTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR GCA 90 bp GCTCACTACTTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTCATTCATCAAGAACCTaGTGCAAGCTACACGTGTTC +
Preference number: 4 (lower is better)
Translates to: AHYFWKVCHGGPASTDNAHSSRT*CKLHVF
Trigger: GAACACGTGTAGCTTGCAGCAGGTTCTTGATGAATG...AGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAAGTAGTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp GCTCACTACTTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTTTAGGTGTTGGTGCATaGATGGTGTACACCTGTGTA +
Preference number: 4 (lower is better)
Translates to: AHYFWKVCHGGPASTDNALGVGA*MVYTCV
Trigger: TACACAGGTGTACACCATGCATGCACCAACACCTAA...AGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAAGTAGTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp TTTAGTAGGACTTTATCCCAGTGGCAGATACTGCTCCCAGGTGTAGGGTACCAGCGCAAGGGAATTCAGTaGTCGGGCCATACTACCCAT +
Preference number: 4 (lower is better)
Translates to: FSRTLSQWQILLPGVGYQRKGIQ*SGHTTH
Trigger: ATGGGTAGTATGGCCCGAGCACTGAATTCCCTTGCG...CTGGTACCCTACACCTGGGAGCAGTATCTGCCACTGGGATAAAGTCCTACTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp TTACTTGAAACTGTTTCATCCTGTTACATTCTGTGCGTGGCTCCCTCTAGAAAGCAAGGTGCTGTGCAGTaGCTGGGGGATGGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: LLETVSSCYILCVAPSRKQGAVQ*LGDGPH
Trigger: GTGAGGGCCATCCCCCAGGCACTGCACAGCACCTTG...CTTTCTAGAGGGAGCCACGCACAGAATGTAACAGGATGAAACAGTTTCAAGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp GATTTACTCGAAAGAACACAAACGCTCCACAGTAAGCAAGTCTCCCTGTGTTGTCAGCATCAGCCAAGGTaGTGTGCAGTGCCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: DLLERTQTLHSKQVSLCCQHQPR*CAVPGG
Trigger: TCCCCCAGGCACTGCACAGCACCTTGGCTGATGCTG...ACAACACAGGGAGACTTGCTTACTGTGGAGCGTTTGTGTTCTTTCGAGTAAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp CGGGCCATACTACCCATGGGCTGTTTGCCCTTCACTGAATGGCTAAGACGGCACGAACTTCAGCACCAGTaGGCAATAAGCCACTTTATT +
Preference number: 4 (lower is better)
Translates to: RAILPMGCLPFTEWLRRHELQHQ*AISHFI
Trigger: AATAAAGTGGCTTATTGCCCACTGGTGCTGAAGTTC...GTGCCGTCTTAGCCATTCAGTGAAGGGCAAACAGCCCATGGGTAGTATGGCCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp TTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTATTGTTATTCTCTCTGGCTTTCTGTaGGTCAGTGTCCTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: FWKVCHGGPASTDNAIVILSGFL*VSVLGR
Trigger: CCTGCCAAGGACACTGACCCACAGAAAGCCAGAGAG...AATAACAATAGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp ACTTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTATTGTTAGCTAGGGCTGACCAGTaGTTACGTTTTCCACAGGGT +
Preference number: 4 (lower is better)
Translates to: TFGRSAMVAQPPLTMLLLARADQ*LRFPQG
Trigger: ACCCTGTGGAAAACGTAACCACTGGTCAGCCCTAGC...TAACAATAGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp ACTGTAGTCCAGCGTCTCCTCCTCAGAAGGTCCGATCTTCCTGATGCAGAGCACAGATACTGCCTGCTGTaGATCAATAGGGTCCATACT +
Preference number: 4 (lower is better)
Translates to: TVVQRLLLRRSDLPDAEHRYCLL*INRVHT
Trigger: AGTATGGACCCTATTGATCCACAGCAGGCAGTATCT...GTGCTCTGCATCAGGAAGATCGGACCTTCTGAGGAGGAGACGCTGGACTACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CCA 90 bp AGGCAAGTACCACGGCCTGAACTGCAAAGCCGTCGCCGGAAAACATCAGAAGCTCAACGTTTCCTAGGCTaGAATCACGGTAAAGTTTGG +
Preference number: 4 (lower is better)
Translates to: RQVPRPELQSRRRKTSEAQRFLG*NHGKVW
Trigger: CCAAACTTTACCGTGATTCCAGCCTAGGAAACGTTG...AGCTTCTGATGTTTTCCGGCGACGGCTTTGCAGTTCAGGCCGTGGTACTTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CCA 90 bp AGGCAAGTACCACGGCCTGAACTGCAAAGCCGTCGCCGGAAAACATCAGAAGCTACTGCATTATCGTGGTaGGCAATCCCATTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: RQVPRPELQSRRRKTSEATALSW*AIPFSG
Trigger: TCCAGAAAATGGGATTGCCCACCACGATAATGCAGT...AGCTTCTGATGTTTTCCGGCGACGGCTTTGCAGTTCAGGCCGTGGTACTTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CCA 90 bp CTAAGGCATCCTGTGTGGTGGCAGCAAAGGGCCTGGTCCTTTGGTCTGTACCATACTGCATTATCGTGGTaGGCAATCCCATTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: LRHPVWWQQRAWSFGLYHTALSW*AIPFSG
Trigger: TCCAGAAAATGGGATTGCCCACCACGATAATGCAGT...ATGGTACAGACCAAAGGACCAGGCCCTTTGCTGCCACCACACAGGATGCCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp AGGCAAGTACCACGGCCTGAACTGCAAAGCCGTCGCCGGAAAACATCAGAAGCTAAAGAAAGTCACGCTTaGGAGGCTCATTATCAAGGC +
Preference number: 4 (lower is better)
Translates to: RQVPRPELQSRRRKTSEAKESHA*EAHYQG
Trigger: GCCTTGATAATGAGCCTCCCAAGCGTGACTTTCTTT...AGCTTCTGATGTTTTCCGGCGACGGCTTTGCAGTTCAGGCCGTGGTACTTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CCA 90 bp ATCCGGGCCCTGGTGATTCCTCTTGTATCATCAATAGCTCTCTCTGGAAGGCTCACCTGGGGCCACAGCTaGATAAAGAAAGTCACGCTT +
Preference number: 4 (lower is better)
Translates to: IRALVIPLVSSIALSGRLTWGHS*IKKVTL
Trigger: AAGCGTGACTTTCTTTATCCAGCTGTGGCCCCAGGT...GAGCCTTCCAGAGAGAGCTATTGATGATACAAGAGGAATCACCAGGGCCCGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp TTTAGTAGGACTTTATCCCAGTGGCAGATACTGCTCCCAGGTGTAGGGTACCAGGGAACCCAAAGGGCATaGATCTGTGTTACAGGAGCG +
Preference number: 4 (lower is better)
Translates to: FSRTLSQWQILLPGVGYQGTQRA*ICVTGA
Trigger: CGCTCCTGTAACACAGATCCATGCCCTTTGGGTTCC...CTGGTACCCTACACCTGGGAGCAGTATCTGCCACTGGGATAAAGTCCTACTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp TCTCCCTGTGTTGTTTGGATCTCTCCAATCTGGCATTCCCTCCTAATACCGTGTGAATCCGCATTGCACTaGGTCCCATCGATCACCGCA +
Preference number: 4 (lower is better)
Translates to: SPCVVWISPIWHSLLIPCESALH*VPSITA
Trigger: TGCGGTGATCGATGGGACCCAGTGCAATGCGGATTC...ACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAACAACACAGGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp GCAGCAAAGGGCCTGGTCCTTTGGTCTGTACCATACCCCAGGTCTGGTTTCTGCAGCTTCCAAGGATTCTaGTTCATCAGTTGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: AAKGLVLWSVPYPRSGFCSFQGF*FISWSL
Trigger: AAGAGACCAACTGATGAACCAGAATCCTTGGAAGCT...GCAGAAACCAGACCTGGGGTATGGTACAGACCAAAGGACCAGGCCCTTTGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp TCTCTCGAAAATCTCGGGAACCCAAAGGGCATGGATCTGTGTTACAGGAGCGATGCAAAAGGGTCTGCCTaGTTACCGAGCCAGTCTATC +
Preference number: 4 (lower is better)
Translates to: SLENLGNPKGMDLCYRSDAKGSA*LPSQSI
Trigger: GATAGACTGGCTCGGTAACCAGGCAGACCCTTTTGC...ATCGCTCCTGTAACACAGATCCATGCCCTTTGGGTTCCCGAGATTTTCGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CCA 90 bp CGGGCCATACTACCCATGGGCTGTTTGCCCTTCACTGAATGGCTAAGACGGCACTTGAGTTTTAGGTGTTaGTGCATGCATGGTGTACAC +
Preference number: 4 (lower is better)
Translates to: RAILPMGCLPFTEWLRRHLSFRC*CMHGVH
Trigger: GTGTACACCATGCATGCACCAACACCTAAAACTCAA...GTGCCGTCTTAGCCATTCAGTGAAGGGCAAACAGCCCATGGGTAGTATGGCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp TTCTGTGCGTGGCTCCCTCTAGAAAGGCACTCTGATGCTGCCCCGGGGGATGCCAATCACGGTAAAGTTTaGCAACAATATTCATCACAC +
Preference number: 4 (lower is better)
Translates to: FCAWLPLERHSDAAPGDANHGKV*QQYSSH
Trigger: GTGTGATGAATATTGTTGCCAAACTTTACCGTGATT...GGCATCCCCCGGGGCAGCATCAGAGTGCCTTTCTAGAGGGAGCCACGCACAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381055.8
CDS-3UTR TCA 90 bp AAGGAGGTAAACAGGCTATTGGATTTACTCGAAAGAACACAAACGCTCCACAGTTGTCCAAGGCCACACTaGGCAGAACACTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: KEVNRLLDLLERTQTLHSCPRPH*AEHWPQ
Trigger: CTGGGGCCAGTGTTCTGCTCAGTGTGGCCTTGGACA...ACTGTGGAGCGTTTGTGTTCTTTCGAGTAAATCCAATAGCCTGTTTACCTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp GTTTGGATCTCTCCAATCTGGCATTCCCTCCTAATACCGTGTCCAGCACTTTGGCTGGAATACTGTTGGTaGCACAGCGGTTGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: VWISPIWHSLLIPCPALWLEYCW*HSGCFC
Trigger: GCAAAAGCAACCGCTGTGTCACCAACAGTATTCCAG...CCAAAGTGCTGGACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp TTTAGTAGGACTTTATCCCAGTGGCAGATACTGCTCCCAGGTGTAGGGTACCAGGATGCAGATATCCAGTaGATCCGCATTGCACTGGGT +
Preference number: 4 (lower is better)
Translates to: FSRTLSQWQILLPGVGYQDADIQ*IRIALG
Trigger: ACCCAGTGCAATGCGGATTCACTGGATATCTGCATC...CTGGTACCCTACACCTGGGAGCAGTATCTGCCACTGGGATAAAGTCCTACTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp CAGTTTCCCTGGGGTTCCCTAAGTAGTCTATGTAGCTCACTACTTTTGGAAGGTGCCTCCCCTGGGCAGTaGATCATTGAAGAACCCTTC +
Preference number: 4 (lower is better)
Translates to: QFPWGSLSSLCSSLLLEGASPGQ*IIEEPF
Trigger: GAAGGGTTCTTCAATGATTCACTGCCCAGGGGAGGC...ACCTTCCAAAAGTAGTGAGCTACATAGACTACTTAGGGAACCCCAGGGAAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp CTAAGGCATCCTGTGTGGTGGCAGCAAAGGGCCTGGTCCTTTGGTCTGTACCATCTTCACTTCCATAGTTaGCCAAGTCATAACAGCTAC +
Preference number: 4 (lower is better)
Translates to: LRHPVWWQQRAWSFGLYHLHFHS*PSHNSY
Trigger: GTAGCTGTTATGACTTGGTCAACTATGGAAGTGAAG...ATGGTACAGACCAAAGGACCAGGCCCTTTGCTGCCACCACACAGGATGCCTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp CCCTGTGTTGTTTGGATCTCTCCAATCTGGCATTCCCTCCTAATACCGTGTCCAAGATCCGGGCCCTGGTaGTTCCTCTTGTATCATCAA +
Preference number: 4 (lower is better)
Translates to: PCVVWISPIWHSLLIPCPRSGPW*FLLYHQ
Trigger: TTGATGATACAAGAGGAATCACCAGGGCCCGGATCT...TGGACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAACAACACAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp AAGGAGGTAAACAGGCTATTGGATTTACTCGAAAGAACACAAACGCTCCACAGTTCTAGAAAGGCACTCTaGTGCTGCCCCGGGGGATGC +
Preference number: 4 (lower is better)
Translates to: KEVNRLLDLLERTQTLHSSRKAL*CCPGGC
Trigger: GCATCCCCCGGGGCAGCATCAGAGTGCCTTTCTAGA...ACTGTGGAGCGTTTGTGTTCTTTCGAGTAAATCCAATAGCCTGTTTACCTCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp TTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTATTGTTATTGGCCCCCAGCCAACTTaGATTGCAGCAGGAGAAAAT +
Preference number: 4 (lower is better)
Translates to: FWKVCHGGPASTDNAIVIGPQPT*IAAGEN
Trigger: ATTTTCTCCTGCTGCAATTCAAGTTGGCTGGGGGCC...AATAACAATAGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381055.8
CDS-3UTR GCA 90 bp GTTTGGATCTCTCCAATCTGGCATTCCCTCCTAATACCGTGTCCAGCACTTTGGTGCGGACAGGAGGTTTaGTTTCCTCTGGACATTGTG +
Preference number: 4 (lower is better)
Translates to: VWISPIWHSLLIPCPALWCGQEV*FPLDIV
Trigger: CACAATGTCCAGAGGAAAGCAAACCTCCTGTCCGCA...CCAAAGTGCTGGACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp ACAACCACTGTAGTCCAGCGTCTCCTCCTCAGAAGGTCCGATCTTCCTGATGCATCAGACAATAGAGATTaGACTGGACGACTCACGTAC +
Preference number: 4 (lower is better)
Translates to: TTTVVQRLLLRRSDLPDASDNRD*TGRLTY
Trigger: GTACGTGAGTCGTCCAGTGCAATCTCTATTGTCTGA...TGCATCAGGAAGATCGGACCTTCTGAGGAGGAGACGCTGGACTACAGTGGTTGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR GCA 90 bp GCTCACTACTTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTTACTGGAAACGACATTaGTCATCAGCATCATACACC +
Preference number: 4 (lower is better)
Translates to: AHYFWKVCHGGPASTDNAYWKRH*SSASYT
Trigger: GGTGTATGATGCTGATGAGCAATGTCGTTTCCAGTA...AGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAAGTAGTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp AGTGCAGATATCATATCTAGTAATAAGAACTGCATTATCGTGGTGGGCAATCCCCTCCCCCGCAGGTCCTaGTGCACTCTCCCCATAGTG +
Preference number: 4 (lower is better)
Translates to: SADIISSNKNCIIVVGNPLPRRS*CTLPIV
Trigger: CACTATGGGGAGAGTGCAGCAGGACCTGCGGGGGAG...GGGATTGCCCACCACGATAATGCAGTTCTTATTACTAGATATGATATCTGCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR GCA 90 bp AGGCAAGTACCACGGCCTGAACTGCAAAGCCGTCGCCGGAAAACATCAGAAGCTAATCTCAGCTTTACTTaGACAATGGCAAGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: RQVPRPELQSRRRKTSEANLSFT*TMASWP
Trigger: TGGCCAACTTGCCATTGTGCAAGTAAAGCTGAGATT...AGCTTCTGATGTTTTCCGGCGACGGCTTTGCAGTTCAGGCCGTGGTACTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR GCA 90 bp CTAAGGCATCCTGTGTGGTGGCAGCAAAGGGCCTGGTCCTTTGGTCTGTACCATAATCTCAGCTTTACTTaGACAATGGCAAGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: LRHPVWWQQRAWSFGLYHNLSFT*TMASWP
Trigger: TGGCCAACTTGCCATTGTGCAAGTAAAGCTGAGATT...ATGGTACAGACCAAAGGACCAGGCCCTTTGCTGCCACCACACAGGATGCCTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp TGTCCTTGGCAGGTCTTACAACACATCTGTCTGAAGTATGCTCGACTGCAGAACAACTGCAAAAGGGTCTaGCTGGTTACCGAGCCAGTC +
Preference number: 4 (lower is better)
Translates to: CPWQVLQHICLKYARLQNNCKRV*LVTEPV
Trigger: GACTGGCTCGGTAACCAGGCAGACCCTTTTGCAGTT...GTTCTGCAGTCGAGCATACTTCAGACAGATGTGTTGTAAGACCTGCCAAGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR GCA 90 bp ATCCGGGCCCTGGTGATTCCTCTTGTATCATCAATAGCTCTCTCTGGAAGGCTCTCCTGTTACATTCTGTaGGTGGCTCCCTCTAGAAAG +
Preference number: 4 (lower is better)
Translates to: IRALVIPLVSSIALSGRLSCYIL*VAPSRK
Trigger: CTTTCTAGAGGGAGCCACGCACAGAATGTAACAGGA...GAGCCTTCCAGAGAGAGCTATTGATGATACAAGAGGAATCACCAGGGCCCGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp CATTTGCTTTCACACTGCTGCATTGATGGAGGCCGAACAGTTTCTAGACAGTCATACTTTTGGAAGGTCTaGCATGGTGGCCCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: HLLSHCCIDGGRTVSRQSYFWKV*HGGPAS
Trigger: GGAGGCTGGGCCACCATGGCAGACCTTCCAAAAGTA...TGACTGTCTAGAAACTGTTCGGCCTCCATCAATGCAGCAGTGTGAAAGCAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CCA 90 bp ATCCGGGCCCTGGTGATTCCTCTTGTATCATCAATAGCTCTCTCTGGAAGGCTCTGTGGTGGACATGACTaGTTGTTGCAGGGCTCTTTT +
Preference number: 4 (lower is better)
Translates to: IRALVIPLVSSIALSGRLCGGHD*LLQGSF
Trigger: AAAAGAGCCCTGCAACAACCAGTCATGTCCACCACA...GAGCCTTCCAGAGAGAGCTATTGATGATACAAGAGGAATCACCAGGGCCCGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp ACAACCACTGTAGTCCAGCGTCTCCTCCTCAGAAGGTCCGATCTTCCTGATGCATGGACATTGTGCAGCTaGGAATGTCTTAGAAAGGTC +
Preference number: 4 (lower is better)
Translates to: TTTVVQRLLLRRSDLPDAWTLCS*ECLRKV
Trigger: GACCTTTCTAAGACATTCCCAGCTGCACAATGTCCA...TGCATCAGGAAGATCGGACCTTCTGAGGAGGAGACGCTGGACTACAGTGGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CCA 90 bp GGCCACAGCTGGATAAAGAAAGTCACGCTTGGGAGGCTCATTATCAAGGCAAGTGTGGGTCAGTGTCCTTaGCAGGTCTTACAACACATC +
Preference number: 4 (lower is better)
Translates to: GHSWIKKVTLGRLIIKASVGQCP*QVLQHI
Trigger: GATGTGTTGTAAGACCTGCCAAGGACACTGACCCAC...ACTTGCCTTGATAATGAGCCTCCCAAGCGTGACTTTCTTTATCCAGCTGTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CCA 90 bp CCCTGTGTTGTTTGGATCTCTCCAATCTGGCATTCCCTCCTAATACCGTGTCCAACAAGGCACTCTCTCTaGCTTTCTGTGGGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: PCVVWISPIWHSLLIPCPTRHSL*LSVGQC
Trigger: ACACTGACCCACAGAAAGCCAGAGAGAGTGCCTTGT...TGGACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAACAACACAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp GTGGCAGCAAAGGGCCTGGTCCTTTGGTCTGTACCATACCCCAGGTCTGGTTTCGTTTATCTCCAAGTTTaGCTGATCTTCTGTGAGAAC +
Preference number: 4 (lower is better)
Translates to: VAAKGLVLWSVPYPRSGFVYLQV*LIFCEN
Trigger: GTTCTCACAGAAGATCAGCCAAACTTGGAGATAAAC...GAAACCAGACCTGGGGTATGGTACAGACCAAAGGACCAGGCCCTTTGCTGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp CTAAGGCATCCTGTGTGGTGGCAGCAAAGGGCCTGGTCCTTTGGTCTGTACCATAGGGACTTGTCTGCATaGTGGTTTATCTCCAAGTTT +
Preference number: 4 (lower is better)
Translates to: LRHPVWWQQRAWSFGLYHRDLSA*WFISKF
Trigger: AAACTTGGAGATAAACCACCATGCAGACAAGTCCCT...ATGGTACAGACCAAAGGACCAGGCCCTTTGCTGCCACCACACAGGATGCCTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp CCCTGTGTTGTTTGGATCTCTCCAATCTGGCATTCCCTCCTAATACCGTGTCCATGTCCCCTCAGCTGCTaGAATACTGTTGGTGACACA +
Preference number: 4 (lower is better)
Translates to: PCVVWISPIWHSLLIPCPCPLSC*NTVGDT
Trigger: TGTGTCACCAACAGTATTCCAGCAGCTGAGGGGACA...TGGACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAACAACACAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp CAGTTTCCCTGGGGTTCCCTAAGTAGTCTATGTAGCTCACTACTTTTGGAAGGTCCCCCATCTATGCTCTaGGGCCAAGTGCCAAAAGGA +
Preference number: 4 (lower is better)
Translates to: QFPWGSLSSLCSSLLLEGPPSML*GQVPKG
Trigger: TCCTTTTGGCACTTGGCCCCAGAGCATAGATGGGGG...ACCTTCCAAAAGTAGTGAGCTACATAGACTACTTAGGGAACCCCAGGGAAACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp AGGCAAGTACCACGGCCTGAACTGCAAAGCCGTCGCCGGAAAACATCAGAAGCTAGCTTCCAAGGATTCTaGTTCATCAGTTGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: RQVPRPELQSRRRKTSEASFQGF*FISWSL
Trigger: AAGAGACCAACTGATGAACCAGAATCCTTGGAAGCT...AGCTTCTGATGTTTTCCGGCGACGGCTTTGCAGTTCAGGCCGTGGTACTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CCA 90 bp CTAAGGCATCCTGTGTGGTGGCAGCAAAGGGCCTGGTCCTTTGGTCTGTACCATACCATACCCCAGGTCTaGTTTCTGCATGAAATTGAA +
Preference number: 4 (lower is better)
Translates to: LRHPVWWQQRAWSFGLYHTIPQV*FLHEIE
Trigger: TTCAATTTCATGCAGAAACCAGACCTGGGGTATGGT...ATGGTACAGACCAAAGGACCAGGCCCTTTGCTGCCACCACACAGGATGCCTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp GTGGCAGCAAAGGGCCTGGTCCTTTGGTCTGTACCATACCCCAGGTCTGGTTTCACTTGCCCAAGAAACTaGGTTTCACATTTAATTGCC +
Preference number: 4 (lower is better)
Translates to: VAAKGLVLWSVPYPRSGFTCPRN*VSHLIA
Trigger: GGCAATTAAATGTGAAACCCAGTTTCTTGGGCAAGT...GAAACCAGACCTGGGGTATGGTACAGACCAAAGGACCAGGCCCTTTGCTGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp GGCCACAGCTGGATAAAGAAAGTCACGCTTGGGAGGCTCATTATCAAGGCAAGTAGACGGCACTTGGGCTaGTCTTCTAAGGGCATCTTA +
Preference number: 4 (lower is better)
Translates to: GHSWIKKVTLGRLIIKASRRHLG*SSKGIL
Trigger: TAAGATGCCCTTAGAAGACCAGCCCAAGTGCCGTCT...ACTTGCCTTGATAATGAGCCTCCCAAGCGTGACTTTCTTTATCCAGCTGTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CCA 90 bp TGTCCTTGGCAGGTCTTACAACACATCTGTCTGAAGTATGCTCGACTGCAGAACTTGCCCTTCACTGAATaGCTAAGACGGCACTTGGGC +
Preference number: 4 (lower is better)
Translates to: CPWQVLQHICLKYARLQNLPFTE*LRRHLG
Trigger: GCCCAAGTGCCGTCTTAGCCATTCAGTGAAGGGCAA...GTTCTGCAGTCGAGCATACTTCAGACAGATGTGTTGTAAGACCTGCCAAGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CCA 90 bp ACATCTGGAACTCATCGTAATTGTCAACAAACTGCAAAAGGGTCTGCCTGGTTAGTGCTGTGCAGTGCCTaGGGGATGGCCCTCACAATG +
Preference number: 4 (lower is better)
Translates to: TSGTHRNCQQTAKGSAWLVLCSA*GMALTM
Trigger: CATTGTGAGGGCCATCCCCCAGGCACTGCACAGCAC...TAACCAGGCAGACCCTTTTGCAGTTTGTTGACAATTACGATGAGTTCCAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp ACTTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTATTGTTAAGGACTTTATCCCAGTaGCAGATACTGCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: TFGRSAMVAQPPLTMLLLRTLSQ*QILLPG
Trigger: ACCTGGGAGCAGTATCTGCCACTGGGATAAAGTCCT...TAACAATAGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR CAA 72 bp GCTGCTGGAATACTGTTGGTGACACAGCGGTTGCTTTaGCTGAGACACCAGAGCTCTCTACACACCCATATT +
Preference number: 4 (lower is better)
Translates to: AAGILLVTQRLL*LRHQSSLHTHI
Trigger: AATATGGGTGTGTAGAGAGCTCTGGTGTCTCAGCAAAAGCAACCGCTGTGTCACCAACAGTATTCCAGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR TCA 90 bp ACTTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTATTGTTAGTGTTGCAGGCTCTTTaGTTTTCAGGTGGCTTACTG +
Preference number: 4 (lower is better)
Translates to: TFGRSAMVAQPPLTMLLLVLQAL*FSGGLL
Trigger: CAGTAAGCCACCTGAAAATCAAAGAGCCTGCAACAC...TAACAATAGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp TCTCCCTGTGTTGTTTGGATCTCTCCAATCTGGCATTCCCTCCTAATACCGTGTTTCACACTGCTGCATTaGTGGAGGCCGAACAGTTTC +
Preference number: 4 (lower is better)
Translates to: SPCVVWISPIWHSLLIPCFTLLH*WRPNSF
Trigger: GAAACTGTTCGGCCTCCATCAATGCAGCAGTGTGAA...ACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAACAACACAGGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp GATTTACTCGAAAGAACACAAACGCTCCACAGTAAGCAAGTCTCCCTGTGTTGTCTCGACTGCAGAACTTaGACTTCAGCACCAGTGGGC +
Preference number: 4 (lower is better)
Translates to: DLLERTQTLHSKQVSLCCLDCRT*TSAPVG
Trigger: GCCCACTGGTGCTGAAGTTCAAGTTCTGCAGTCGAG...ACAACACAGGGAGACTTGCTTACTGTGGAGCGTTTGTGTTCTTTCGAGTAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp GTTTGGATCTCTCCAATCTGGCATTCCCTCCTAATACCGTGTCCAGCACTTTGGCTGGGTGGCTCTCTTTaGTGGATGCATTTCCATGAT +
Preference number: 4 (lower is better)
Translates to: VWISPIWHSLLIPCPALWLGGSL*WMHFHD
Trigger: ATCATGGAAATGCATCCATCAAAGAGAGCCACCCAG...CCAAAGTGCTGGACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp ATCCGGGCCCTGGTGATTCCTCTTGTATCATCAATAGCTCTCTCTGGAAGGCTCGAAAACATTCCATGCTaGTTGTCCACAGCAAACCTG +
Preference number: 4 (lower is better)
Translates to: IRALVIPLVSSIALSGRLENIPC*LSTANL
Trigger: CAGGTTTGCTGTGGACAATCAGCATGGAATGTTTTC...GAGCCTTCCAGAGAGAGCTATTGATGATACAAGAGGAATCACCAGGGCCCGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp ACAACCACTGTAGTCCAGCGTCTCCTCCTCAGAAGGTCCGATCTTCCTGATGCAAGATACAGATGGTCATaGCTGAGAGTGCAGAAAACA +
Preference number: 4 (lower is better)
Translates to: TTTVVQRLLLRRSDLPDARYRWS*LRVQKT
Trigger: TGTTTTCTGCACTCTCAGTCATGACCATCTGTATCT...TGCATCAGGAAGATCGGACCTTCTGAGGAGGAGACGCTGGACTACAGTGGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR TCA 90 bp ACTTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTATTGTTATCTAGGCTATCACTCTaGGATGCTGCCTTTGCAAAC +
Preference number: 4 (lower is better)
Translates to: TFGRSAMVAQPPLTMLLLSRLSL*DAAFAN
Trigger: GTTTGCAAAGGCAGCATCTCAGAGTGATAGCCTAGA...TAACAATAGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381055.8
CDS-3UTR GCA 90 bp TCTCCCTGTGTTGTTTGGATCTCTCCAATCTGGCATTCCCTCCTAATACCGTGTACATTGGCGGGAGGTTaGTCCATACTGGAAACGACA +
Preference number: 4 (lower is better)
Translates to: SPCVVWISPIWHSLLIPCTLAGG*SILETT
Trigger: TGTCGTTTCCAGTATGGAGCAACCTCCCGCCAATGT...ACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAACAACACAGGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp CAGTTTCCCTGGGGTTCCCTAAGTAGTCTATGTAGCTCACTACTTTTGGAAGGTCCAGTGAATCCGCATTaGACTGGGTCCCATCGATCA +
Preference number: 4 (lower is better)
Translates to: QFPWGSLSSLCSSLLLEGPVNPH*TGSHRS
Trigger: TGATCGATGGGACCCAGTGCAATGCGGATTCACTGG...ACCTTCCAAAAGTAGTGAGCTACATAGACTACTTAGGGAACCCCAGGGAAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp ACAAACTGCAAAAGGGTCTGCCTGGTTACCGAGCCAGTCTATCTTTTGCATGGTGCATTTTGTTCTCAGTaGTGGGGCACATCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: TNCKRVCLVTEPVYLLHGAFCSQ*WGTSQK
Trigger: CTTCTGGGATGTGCCCCAGCACTGAGAACAAAATGC...ACCATGCAAAAGATAGACTGGCTCGGTAACCAGGCAGACCCTTTTGCAGTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp AGGCAAGTACCACGGCCTGAACTGCAAAGCCGTCGCCGGAAAACATCAGAAGCTTCTTTGATTTTCAGGTaGCTTACTGTCAGGATCACA +
Preference number: 4 (lower is better)
Translates to: RQVPRPELQSRRRKTSEASLIFR*LTVRIT
Trigger: TGTGATCCTGACAGTAAGCCACCTGAAAATCAAAGA...AGCTTCTGATGTTTTCCGGCGACGGCTTTGCAGTTCAGGCCGTGGTACTTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CCA 90 bp TCTCCCTGTGTTGTTTGGATCTCTCCAATCTGGCATTCCCTCCTAATACCGTGTTCCTCTTCCTCTGGGTaGCTCTCTTTGATGGATGCA +
Preference number: 4 (lower is better)
Translates to: SPCVVWISPIWHSLLIPCSSSSG*LSLMDA
Trigger: TGCATCCATCAAAGAGAGCCACCCAGAGGAAGAGGA...ACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAACAACACAGGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp AGGCAAGTACCACGGCCTGAACTGCAAAGCCGTCGCCGGAAAACATCAGAAGCTGCTTGGAATCCTCTGTaGTATTCTTTAAAGGTTCGA +
Preference number: 4 (lower is better)
Translates to: RQVPRPELQSRRRKTSEAAWNPL*YSLKVR
Trigger: TCGAACCTTTAAAGAATACCACAGAGGATTCCAAGC...AGCTTCTGATGTTTTCCGGCGACGGCTTTGCAGTTCAGGCCGTGGTACTTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CCA 90 bp CCATTGATGCAGATATCCAGTGAATCCGCATTGCACTGGGTCCCATCGATCACCGACTTGTCTGCATGGTaGTTTATCTCCAAGTTTGGC +
Preference number: 4 (lower is better)
Translates to: PLMQISSESALHWVPSITDLSAW*FISKFG
Trigger: GCCAAACTTGGAGATAAACCACCATGCAGACAAGTC...GGTGATCGATGGGACCCAGTGCAATGCGGATTCACTGGATATCTGCATCAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CCA 90 bp ACAAACTGCAAAAGGGTCTGCCTGGTTACCGAGCCAGTCTATCTTTTGCATGGTACCTGGGGCCACAGCTaGATAAAGAAAGTCACGCTT +
Preference number: 4 (lower is better)
Translates to: TNCKRVCLVTEPVYLLHGTWGHS*IKKVTL
Trigger: AAGCGTGACTTTCTTTATCCAGCTGTGGCCCCAGGT...ACCATGCAAAAGATAGACTGGCTCGGTAACCAGGCAGACCCTTTTGCAGTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp ATCCGGGCCCTGGTGATTCCTCTTGTATCATCAATAGCTCTCTCTGGAAGGCTCGAGGTTGCTCCATACTaGAAACGACATTGCTCATCA +
Preference number: 4 (lower is better)
Translates to: IRALVIPLVSSIALSGRLEVAPY*KRHCSS
Trigger: TGATGAGCAATGTCGTTTCCAGTATGGAGCAACCTC...GAGCCTTCCAGAGAGAGCTATTGATGATACAAGAGGAATCACCAGGGCCCGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp GCATTATCGTGGTGGGCAATCCCATTTTCTGGAATGGTGTTTCCATCACTTTGGGGAACCCAAAGGGCATaGATCTGTGTTACAGGAGCG +
Preference number: 4 (lower is better)
Translates to: ALSWWAIPFSGMVFPSLWGTQRA*ICVTGA
Trigger: CGCTCCTGTAACACAGATCCATGCCCTTTGGGTTCC...CCAAAGTGATGGAAACACCATTCCAGAAAATGGGATTGCCCACCACGATAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CCA 90 bp AAGGAGGTAAACAGGCTATTGGATTTACTCGAAAGAACACAAACGCTCCACAGTCTAAGGCATCCTGTGTaGTGGCAGCAAAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: KEVNRLLDLLERTQTLHSLRHPV*WQQRAW
Trigger: CCAGGCCCTTTGCTGCCACCACACAGGATGCCTTAG...ACTGTGGAGCGTTTGTGTTCTTTCGAGTAAATCCAATAGCCTGTTTACCTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp GCATTATCGTGGTGGGCAATCCCATTTTCTGGAATGGTGTTTCCATCACTTTGGAAGCCGTGCTGTGGCTaGGGAGGATGTAAACACAAG +
Preference number: 4 (lower is better)
Translates to: ALSWWAIPFSGMVFPSLWKPCCG*GGCKHK
Trigger: CTTGTGTTTACATCCTCCCCAGCCACAGCACGGCTT...CCAAAGTGATGGAAACACCATTCCAGAAAATGGGATTGCCCACCACGATAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CCA 90 bp TGTGCTTCCGTCCCCTCCACAGACTCGACATCTATCTTCCCTAGCATCAGATCCAATGGGGAGGCATTTTaGACACAAAGCACATTCATC +
Preference number: 4 (lower is better)
Translates to: CASVPSTDSTSIFPSIRSNGEAF*TQSTFI
Trigger: GATGAATGTGCTTTGTGTCCAAAATGCCTCCCCATT...GGATCTGATGCTAGGGAAGATAGATGTCGAGTCTGTGGAGGGGACGGAAGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CCA 90 bp CTCCTGAAGGTTTTAGCTACTTACGCTGGACTGTCACAGTGTCTTAGGGATGAGGTAGCTCACTACTTTTaGAAGGTCTGCCATGGTGGC +
Preference number: 4 (lower is better)
Translates to: LLKVLATYAGLSQCLRDEVAHYF*KVCHGG
Trigger: GCCACCATGGCAGACCTTCCAAAAGTAGTGAGCTAC...CTCATCCCTAAGACACTGTGACAGTCCAGCGTAAGTAGCTAAAACCTTCAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR CAA 72 bp CAAACGCTCCACAGTAAGCAAGTCTCCCTGTGTTGTTaGGATCTCTCCAATCTGGCATTCCCTCCTAATACC +
Preference number: 4 (lower is better)
Translates to: QTLHSKQVSLCC*DLSNLAFPPNT
Trigger: GGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAACAACACAGGGAGACTTGCTTACTGTGGAGCGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp TTACTTGAAACTGTTTCATCCTGTTACATTCTGTGCGTGGCTCCCTCTAGAAAGAAGGTCCGATCTTCCTaGTGCAGAGCACTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: LLETVSSCYILCVAPSRKKVRSS*CRALPL
Trigger: CAAGGGCAGTGCTCTGCATCAGGAAGATCGGACCTT...CTTTCTAGAGGGAGCCACGCACAGAATGTAACAGGATGAAACAGTTTCAAGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp ACTTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTATTGTTAGAACAATCCGATGCTTaGATCCTGGACCACATTTTG +
Preference number: 4 (lower is better)
Translates to: TFGRSAMVAQPPLTMLLLEQSDA*ILDHIL
Trigger: CAAAATGTGGTCCAGGATTCAAGCATCGGATTGTTC...TAACAATAGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp ACTTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTATTGTTATACAACACATCTGTCTaGAGTATGCTCGACTGCAGA +
Preference number: 4 (lower is better)
Translates to: TFGRSAMVAQPPLTMLLLYNTSV*SMLDCR
Trigger: TCTGCAGTCGAGCATACTTCAGACAGATGTGTTGTA...TAACAATAGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp TTTAGTAGGACTTTATCCCAGTGGCAGATACTGCTCCCAGGTGTAGGGTACCAGATTTCCATGATGAAATaGCAAGGCACTCTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: FSRTLSQWQILLPGVGYQISMMK*QGTLSG
Trigger: GCCAGAGAGAGTGCCTTGTCATTTCATCATGGAAAT...CTGGTACCCTACACCTGGGAGCAGTATCTGCCACTGGGATAAAGTCCTACTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp ATCCGGGCCCTGGTGATTCCTCTTGTATCATCAATAGCTCTCTCTGGAAGGCTCACTATGAAATTCCGATaGAGCCATGATGAGGCTCAA +
Preference number: 4 (lower is better)
Translates to: IRALVIPLVSSIALSGRLTMKFR*SHDEAQ
Trigger: TTGAGCCTCATCATGGCTTCATCGGAATTTCATAGT...GAGCCTTCCAGAGAGAGCTATTGATGATACAAGAGGAATCACCAGGGCCCGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp GTTTGGATCTCTCCAATCTGGCATTCCCTCCTAATACCGTGTCCAGCACTTTGGGTCAGGAATTCCTCTTaGGAACTGTATGAAAGCCTG +
Preference number: 4 (lower is better)
Translates to: VWISPIWHSLLIPCPALWVRNSS*ELYESL
Trigger: CAGGCTTTCATACAGTTCTCAAGAGGAATTCCTGAC...CCAAAGTGCTGGACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp CATTTGCTTTCACACTGCTGCATTGATGGAGGCCGAACAGTTTCTAGACAGTCACCGTTCAATGCTCACTaGTCTCTTCTGTCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: HLLSHCCIDGGRTVSRQSPFNAH*SLLSVV
Trigger: CACCACAGACAGAAGAGATCAGTGAGCATTGAACGG...TGACTGTCTAGAAACTGTTCGGCCTCCATCAATGCAGCAGTGTGAAAGCAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR TCA 90 bp TCTCCCTGTGTTGTTTGGATCTCTCCAATCTGGCATTCCCTCCTAATACCGTGTTTGGCTGATCTTCTGTaGGAACAATTAAGCGGGCCA +
Preference number: 4 (lower is better)
Translates to: SPCVVWISPIWHSLLIPCLADLL*EQLSGP
Trigger: TGGCCCGCTTAATTGTTCTCACAGAAGATCAGCCAA...ACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAACAACACAGGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp ACAAACTGCAAAAGGGTCTGCCTGGTTACCGAGCCAGTCTATCTTTTGCATGGTTTGGCTGATCTTCTGTaGGAACAATTAAGCGGGCCA +
Preference number: 4 (lower is better)
Translates to: TNCKRVCLVTEPVYLLHGLADLL*EQLSGP
Trigger: TGGCCCGCTTAATTGTTCTCACAGAAGATCAGCCAA...ACCATGCAAAAGATAGACTGGCTCGGTAACCAGGCAGACCCTTTTGCAGTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp ACTGTAGTCCAGCGTCTCCTCCTCAGAAGGTCCGATCTTCCTGATGCAGAGCACTTCATACCAAAATTGTaGCCAATCTCATGTGCAATG +
Preference number: 4 (lower is better)
Translates to: TVVQRLLLRRSDLPDAEHFIPKL*PISCAM
Trigger: CATTGCACATGAGATTGGTCACAATTTTGGTATGAA...GTGCTCTGCATCAGGAAGATCGGACCTTCTGAGGAGGAGACGCTGGACTACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR TCA 90 bp TTTAGTAGGACTTTATCCCAGTGGCAGATACTGCTCCCAGGTGTAGGGTACCAGACAGATGGTCATGACTaGGAGTGCAGAAAACATTCC +
Preference number: 4 (lower is better)
Translates to: FSRTLSQWQILLPGVGYQTDGHD*ECRKHS
Trigger: GGAATGTTTTCTGCACTCTCAGTCATGACCATCTGT...CTGGTACCCTACACCTGGGAGCAGTATCTGCCACTGGGATAAAGTCCTACTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp TGTGCTTCCGTCCCCTCCACAGACTCGACATCTATCTTCCCTAGCATCAGATCCTTCGTTCTGTGTTACTaGGGATACCTATGTGACATT +
Preference number: 4 (lower is better)
Translates to: CASVPSTDSTSIFPSIRSFVLCY*GYLCDI
Trigger: AATGTCACATAGGTATCCTCAGTAACACAGAACGAA...GGATCTGATGCTAGGGAAGATAGATGTCGAGTCTGTGGAGGGGACGGAAGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR TCA 90 bp ACAAACTGCAAAAGGGTCTGCCTGGTTACCGAGCCAGTCTATCTTTTGCATGGTCGGGCTTTAGAGAACTaGCTTTCCGATTTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: TNCKRVCLVTEPVYLLHGRALEN*LSDLAE
Trigger: TTCTGCCAAATCGGAAAGTCAGTTCTCTAAAGCCCG...ACCATGCAAAAGATAGACTGGCTCGGTAACCAGGCAGACCCTTTTGCAGTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381055.8
CDS-3UTR GCA 90 bp ACTTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTATTGTTAAAAGGTCACTGCTCTTaGACAGAACAATCCGATGCT +
Preference number: 4 (lower is better)
Translates to: TFGRSAMVAQPPLTMLLLKGHCS*TEQSDA
Trigger: AGCATCGGATTGTTCTGTGCAAGAGCAGTGACCTTT...TAACAATAGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp GCTCACTACTTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTAGTAAAGCTGAGAAATaGTCCATTTTGATCAACCCT +
Preference number: 4 (lower is better)
Translates to: AHYFWKVCHGGPASTDNASKAEK*SILINP
Trigger: AGGGTTGATCAAAATGGAGCATTTCTCAGCTTTACT...AGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAAGTAGTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp CTAAGGCATCCTGTGTGGTGGCAGCAAAGGGCCTGGTCCTTTGGTCTGTACCATAGTAAAGCTGAGAAATaGTCCATTTTGATCAACCCT +
Preference number: 4 (lower is better)
Translates to: LRHPVWWQQRAWSFGLYHSKAEK*SILINP
Trigger: AGGGTTGATCAAAATGGAGCATTTCTCAGCTTTACT...ATGGTACAGACCAAAGGACCAGGCCCTTTGCTGCCACCACACAGGATGCCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp ACTTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTATTGTTAAACTTAGATACTGCCTaGTGTGGATCAATAGGGTCC +
Preference number: 4 (lower is better)
Translates to: TFGRSAMVAQPPLTMLLLNLDTA*CGSIGS
Trigger: GGACCCTATTGATCCACAGCAGGCAGTATCTAAGTT...TAACAATAGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp GTTTGGATCTCTCCAATCTGGCATTCCCTCCTAATACCGTGTCCAGCACTTTGGATCGAGGGACTTGTCTaGATGGTGGTTTATCTCCAA +
Preference number: 4 (lower is better)
Translates to: VWISPIWHSLLIPCPALWIEGLV*MVVYLQ
Trigger: TTGGAGATAAACCACCATGCAGACAAGTCCCTCGAT...CCAAAGTGCTGGACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp ACTTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTATTGTTAATCGAGGGACTTGTCTaGATGGTGGTTTATCTCCAA +
Preference number: 4 (lower is better)
Translates to: TFGRSAMVAQPPLTMLLLIEGLV*MVVYLQ
Trigger: TTGGAGATAAACCACCATGCAGACAAGTCCCTCGAT...TAACAATAGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp ACTTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTATTGTTACGCAGTAATGTGAGCTaGCATAAGTTTTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: TFGRSAMVAQPPLTMLLLRSNVS*HKFCCF
Trigger: GAAGCAGCAAAACTTATGGCAGCTCACATTACTGCG...TAACAATAGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp CAGTTTCCCTGGGGTTCCCTAAGTAGTCTATGTAGCTCACTACTTTTGGAAGGTTGCTCTGGGGCCAAGTaGCAAAAGGAACACAATCTC +
Preference number: 4 (lower is better)
Translates to: QFPWGSLSSLCSSLLLEGCSGAK*QKEHNL
Trigger: GAGATTGTGTTCCTTTTGGCACTTGGCCCCAGAGCA...ACCTTCCAAAAGTAGTGAGCTACATAGACTACTTAGGGAACCCCAGGGAAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp GTTTGGATCTCTCCAATCTGGCATTCCCTCCTAATACCGTGTCCAGCACTTTGGTCATCAAGAACCTGCTaGAAGCTACACGTGTTCAAG +
Preference number: 4 (lower is better)
Translates to: VWISPIWHSLLIPCPALWSSRTC*KLHVFK
Trigger: CTTGAACACGTGTAGCTTGCAGCAGGTTCTTGATGA...CCAAAGTGCTGGACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp GTTTGGATCTCTCCAATCTGGCATTCCCTCCTAATACCGTGTCCAGCACTTTGGAGTTTTAGGTGTTGGTaGATGCATGGTGTACACCTG +
Preference number: 4 (lower is better)
Translates to: VWISPIWHSLLIPCPALWSFRCW*MHGVHL
Trigger: CAGGTGTACACCATGCATGCACCAACACCTAAAACT...CCAAAGTGCTGGACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp TTTAGTAGGACTTTATCCCAGTGGCAGATACTGCTCCCAGGTGTAGGGTACCAGAGTTTTAGGTGTTGGTaGATGCATGGTGTACACCTG +
Preference number: 4 (lower is better)
Translates to: FSRTLSQWQILLPGVGYQSFRCW*MHGVHL
Trigger: CAGGTGTACACCATGCATGCACCAACACCTAAAACT...CTGGTACCCTACACCTGGGAGCAGTATCTGCCACTGGGATAAAGTCCTACTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp TTGGAAATCATATGTATCTCACGGGGTTTAATCATTAGGGTACATTTACCGTTCTCAGCCAAGGTGCTGTaGAGTGCCTGGGGGATGGCC +
Preference number: 4 (lower is better)
Translates to: LEIICISRGLIIRVHLPFSAKVL*SAWGMA
Trigger: GGCCATCCCCCAGGCACTGCACAGCACCTTGGCTGA...GAACGGTAAATGTACCCTAATGATTAAACCCCGTGAGATACATATGATTTCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp GTTTGGATCTCTCCAATCTGGCATTCCCTCCTAATACCGTGTCCAGCACTTTGGCCGATGCTTGAATCCTaGACCACATTTTGGAGTACA +
Preference number: 4 (lower is better)
Translates to: VWISPIWHSLLIPCPALWPMLES*TTFWST
Trigger: TGTACTCCAAAATGTGGTCCAGGATTCAAGCATCGG...CCAAAGTGCTGGACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp CATTTGCTTTCACACTGCTGCATTGATGGAGGCCGAACAGTTTCTAGACAGTCATCCTCTTCCTCTGGGTaGCTCTCTTTGATGGATGCA +
Preference number: 4 (lower is better)
Translates to: HLLSHCCIDGGRTVSRQSSSSSG*LSLMDA
Trigger: TGCATCCATCAAAGAGAGCCACCCAGAGGAAGAGGA...TGACTGTCTAGAAACTGTTCGGCCTCCATCAATGCAGCAGTGTGAAAGCAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CCA 90 bp TCTCTCGAAAATCTCGGGAACCCAAAGGGCATGGATCTGTGTTACAGGAGCGATCCGTGTCCAGCACTTTaGATCAATAAATCCCACTTC +
Preference number: 4 (lower is better)
Translates to: SLENLGNPKGMDLCYRSDPCPAL*INKSHF
Trigger: GAAGTGGGATTTATTGATCCAAAGTGCTGGACACGG...ATCGCTCCTGTAACACAGATCCATGCCCTTTGGGTTCCCGAGATTTTCGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CCA 90 bp TTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTATTGTTATTTGGATCTCTCCAATCTaGCATTCCCTCCTAATACCG +
Preference number: 4 (lower is better)
Translates to: FWKVCHGGPASTDNAIVIWISPI*HSLLIP
Trigger: CGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCA...AATAACAATAGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp TTTAGTAGGACTTTATCCCAGTGGCAGATACTGCTCCCAGGTGTAGGGTACCAGAAATCATGTTTCCACTaGGGTCCATCTTTCCCCCAA +
Preference number: 4 (lower is better)
Translates to: FSRTLSQWQILLPGVGYQKSCFH*GPSFPQ
Trigger: TTGGGGGAAAGATGGACCCCAGTGGAAACATGATTT...CTGGTACCCTACACCTGGGAGCAGTATCTGCCACTGGGATAAAGTCCTACTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp TTTAGTAGGACTTTATCCCAGTGGCAGATACTGCTCCCAGGTGTAGGGTACCAGCAACGTTTCCTAGGCTaGAATCACGGTAAAGTTTGG +
Preference number: 4 (lower is better)
Translates to: FSRTLSQWQILLPGVGYQQRFLG*NHGKVW
Trigger: CCAAACTTTACCGTGATTCCAGCCTAGGAAACGTTG...CTGGTACCCTACACCTGGGAGCAGTATCTGCCACTGGGATAAAGTCCTACTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp ACATCTGGAACTCATCGTAATTGTCAACAAACTGCAAAAGGGTCTGCCTGGTTAAAGGGCCTGGTCCTTTaGTCTGTACCATACCCCAGG +
Preference number: 4 (lower is better)
Translates to: TSGTHRNCQQTAKGSAWLKGLVL*SVPYPR
Trigger: CCTGGGGTATGGTACAGACCAAAGGACCAGGCCCTT...TAACCAGGCAGACCCTTTTGCAGTTTGTTGACAATTACGATGAGTTCCAGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp GATTTACTCGAAAGAACACAAACGCTCCACAGTAAGCAAGTCTCCCTGTGTTGTAAGCCGTGCTGTGGCTaGGGAGGATGTAAACACAAG +
Preference number: 4 (lower is better)
Translates to: DLLERTQTLHSKQVSLCCKPCCG*GGCKHK
Trigger: CTTGTGTTTACATCCTCCCCAGCCACAGCACGGCTT...ACAACACAGGGAGACTTGCTTACTGTGGAGCGTTTGTGTTCTTTCGAGTAAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp CAGTTTCCCTGGGGTTCCCTAAGTAGTCTATGTAGCTCACTACTTTTGGAAGGTGTGTTGCAGGCTCTTTaGTTTTCAGGTGGCTTACTG +
Preference number: 4 (lower is better)
Translates to: QFPWGSLSSLCSSLLLEGVLQAL*FSGGLL
Trigger: CAGTAAGCCACCTGAAAATCAAAGAGCCTGCAACAC...ACCTTCCAAAAGTAGTGAGCTACATAGACTACTTAGGGAACCCCAGGGAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp TCTCCCTGTGTTGTTTGGATCTCTCCAATCTGGCATTCCCTCCTAATACCGTGTCTCTTGAGAACTGTATaGAAGCCTGTGGTCACTATG +
Preference number: 4 (lower is better)
Translates to: SPCVVWISPIWHSLLIPCLLRTV*KPVVTM
Trigger: CATAGTGACCACAGGCTTTCATACAGTTCTCAAGAG...ACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAACAACACAGGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp TTTAGTAGGACTTTATCCCAGTGGCAGATACTGCTCCCAGGTGTAGGGTACCAGGCTTGCATTCTCCATTaGTGCAGATATCCAGTGAAT +
Preference number: 4 (lower is better)
Translates to: FSRTLSQWQILLPGVGYQACILH*CRYPVN
Trigger: ATTCACTGGATATCTGCATCAATGGAGAATGCAAGC...CTGGTACCCTACACCTGGGAGCAGTATCTGCCACTGGGATAAAGTCCTACTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp ACTTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTATTGTTACACAGCTGCAGTAACTaGTGCACTGCTTTAAACTAT +
Preference number: 4 (lower is better)
Translates to: TFGRSAMVAQPPLTMLLLHSCSN*CTALNY
Trigger: ATAGTTTAAAGCAGTGCATCAGTTACTGCAGCTGTG...TAACAATAGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp ACTTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTATTGTTATTGATGACCAGGATGTaGAACTTGAAGATGGGGAAA +
Preference number: 4 (lower is better)
Translates to: TFGRSAMVAQPPLTMLLLLMTRM*NLKMGK
Trigger: TTTCCCCATCTTCAAGTTTCACATCCTGGTCATCAA...TAACAATAGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp TTTAGTAGGACTTTATCCCAGTGGCAGATACTGCTCCCAGGTGTAGGGTACCAGAGATACAGATGGTCATaGCTGAGAGTGCAGAAAACA +
Preference number: 4 (lower is better)
Translates to: FSRTLSQWQILLPGVGYQRYRWS*LRVQKT
Trigger: TGTTTTCTGCACTCTCAGTCATGACCATCTGTATCT...CTGGTACCCTACACCTGGGAGCAGTATCTGCCACTGGGATAAAGTCCTACTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp TCTCCCTGTGTTGTTTGGATCTCTCCAATCTGGCATTCCCTCCTAATACCGTGTTTCCTCTGGACATTGTaGAGCTGGGAATGTCTTAGA +
Preference number: 4 (lower is better)
Translates to: SPCVVWISPIWHSLLIPCFLWTL*SWECLR
Trigger: TCTAAGACATTCCCAGCTGCACAATGTCCAGAGGAA...ACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAACAACACAGGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp CCCTGTGTTGTTTGGATCTCTCCAATCTGGCATTCCCTCCTAATACCGTGTCCACATCTGTCTGAAGTATaGTCGACTGCAGAACTTGAA +
Preference number: 4 (lower is better)
Translates to: PCVVWISPIWHSLLIPCPHLSEV*STAELE
Trigger: TTCAAGTTCTGCAGTCGAGCATACTTCAGACAGATG...TGGACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAACAACACAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp TCTCCCTGTGTTGTTTGGATCTCTCCAATCTGGCATTCCCTCCTAATACCGTGTTGCCATAAGTTTTGCTaGTTCATGACCTTTCGTCCC +
Preference number: 4 (lower is better)
Translates to: SPCVVWISPIWHSLLIPCCHKFC*FMTFRP
Trigger: GGGACGAAAGGTCATGAAGCAGCAAAACTTATGGCA...ACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAACAACACAGGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp ACATCTGGAACTCATCGTAATTGTCAACAAACTGCAAAAGGGTCTGCCTGGTTACCAGTGAATCCGCATTaGACTGGGTCCCATCGATCA +
Preference number: 4 (lower is better)
Translates to: TSGTHRNCQQTAKGSAWLPVNPH*TGSHRS
Trigger: TGATCGATGGGACCCAGTGCAATGCGGATTCACTGG...TAACCAGGCAGACCCTTTTGCAGTTTGTTGACAATTACGATGAGTTCCAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp ACAAACTGCAAAAGGGTCTGCCTGGTTACCGAGCCAGTCTATCTTTTGCATGGTCATTCATCAAGAACCTaGTGCAAGCTACACGTGTTC +
Preference number: 4 (lower is better)
Translates to: TNCKRVCLVTEPVYLLHGHSSRT*CKLHVF
Trigger: GAACACGTGTAGCTTGCAGCAGGTTCTTGATGAATG...ACCATGCAAAAGATAGACTGGCTCGGTAACCAGGCAGACCCTTTTGCAGTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp CTAAGGCATCCTGTGTGGTGGCAGCAAAGGGCCTGGTCCTTTGGTCTGTACCATAAATCAGATCTGGATTaGAAACCTATGCCTAAAATG +
Preference number: 4 (lower is better)
Translates to: LRHPVWWQQRAWSFGLYHKSDLD*KPMPKM
Trigger: CATTTTAGGCATAGGTTTGCAATCCAGATCTGATTT...ATGGTACAGACCAAAGGACCAGGCCCTTTGCTGCCACCACACAGGATGCCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp ACAAACTGCAAAAGGGTCTGCCTGGTTACCGAGCCAGTCTATCTTTTGCATGGTTGGACATTGTGCAGCTaGGAATGTCTTAGAAAGGTC +
Preference number: 4 (lower is better)
Translates to: TNCKRVCLVTEPVYLLHGWTLCS*ECLRKV
Trigger: GACCTTTCTAAGACATTCCCAGCTGCACAATGTCCA...ACCATGCAAAAGATAGACTGGCTCGGTAACCAGGCAGACCCTTTTGCAGTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp TTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTATTGTTATTTCTCCCTGTGTTGTTTaGATCTCTCCAATCTGGCAT +
Preference number: 4 (lower is better)
Translates to: FWKVCHGGPASTDNAIVISPCVV*ISPIWH
Trigger: ATGCCAGATTGGAGAGATCCAAACAACACAGGGAGA...AATAACAATAGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp TTACTTGAAACTGTTTCATCCTGTTACATTCTGTGCGTGGCTCCCTCTAGAAAGTGGCAGCAAAGGGCCTaGTCCTTTGGTCTGTACCAT +
Preference number: 4 (lower is better)
Translates to: LLETVSSCYILCVAPSRKWQQRA*SFGLYH
Trigger: ATGGTACAGACCAAAGGACCAGGCCCTTTGCTGCCA...CTTTCTAGAGGGAGCCACGCACAGAATGTAACAGGATGAAACAGTTTCAAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp TTGGAAATCATATGTATCTCACGGGGTTTAATCATTAGGGTACATTTACCGTTCAGGCATCCTGTGTGGTaGCAGCAAAGGGCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: LEIICISRGLIIRVHLPFRHPVW*QQRAWS
Trigger: GGACCAGGCCCTTTGCTGCCACCACACAGGATGCCT...GAACGGTAAATGTACCCTAATGATTAAACCCCGTGAGATACATATGATTTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp ACAAACTGCAAAAGGGTCTGCCTGGTTACCGAGCCAGTCTATCTTTTGCATGGTGTGTTGGTGCATGCATaGTGTACACCTGTGTACAAT +
Preference number: 4 (lower is better)
Translates to: TNCKRVCLVTEPVYLLHGVLVHA*CTPVYN
Trigger: ATTGTACACAGGTGTACACCATGCATGCACCAACAC...ACCATGCAAAAGATAGACTGGCTCGGTAACCAGGCAGACCCTTTTGCAGTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp ACTTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTATTGTTATTGAGTTTTAGGTGTTaGTGCATGCATGGTGTACAC +
Preference number: 4 (lower is better)
Translates to: TFGRSAMVAQPPLTMLLLLSFRC*CMHGVH
Trigger: GTGTACACCATGCATGCACCAACACCTAAAACTCAA...TAACAATAGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp AAGGAGGTAAACAGGCTATTGGATTTACTCGAAAGAACACAAACGCTCCACAGTTTGCCCTTCACTGAATaGCTAAGACGGCACTTGGGC +
Preference number: 4 (lower is better)
Translates to: KEVNRLLDLLERTQTLHSLPFTE*LRRHLG
Trigger: GCCCAAGTGCCGTCTTAGCCATTCAGTGAAGGGCAA...ACTGTGGAGCGTTTGTGTTCTTTCGAGTAAATCCAATAGCCTGTTTACCTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
3UTR CAA 72 bp GAAAGGTCACTGCTCTTGCACAGAACAATCCGATGCTaGAATCCTGGACCACATTTTGGAGTACACTCAGAC +
Preference number: 4 (lower is better)
Translates to: ERSLLLHRTIRC*NPGPHFGVHSD
Trigger: GTCTGAGTGTACTCCAAAATGTGGTCCAGGATTCAAGCATCGGATTGTTCTGTGCAAGAGCAGTGACCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
3UTR CAA 72 bp TGCATGGTGTACACCTGTGTACAATGGGGAGGCATTTaGGACACAAAGCACATTCATCAAGAACCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: CMVYTCVQWGGI*DTKHIHQEPAA
Trigger: TGCAGCAGGTTCTTGATGAATGTGCTTTGTGTCCAAAATGCCTCCCCATTGTACACAGGTGTACACCATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp TTACTTGAAACTGTTTCATCCTGTTACATTCTGTGCGTGGCTCCCTCTAGAAAGCTGGAATACTGTTGGTaGCACAGCGGTTGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: LLETVSSCYILCVAPSRKLEYCW*HSGCFC
Trigger: GCAAAAGCAACCGCTGTGTCACCAACAGTATTCCAG...CTTTCTAGAGGGAGCCACGCACAGAATGTAACAGGATGAAACAGTTTCAAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp GATTTACTCGAAAGAACACAAACGCTCCACAGTAAGCAAGTCTCCCTGTGTTGTTCAATATTCCCAGTTTaGCACAGTGTCCCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: DLLERTQTLHSKQVSLCCSIFPV*HSVPSA
Trigger: AGCTGAGGGGACACTGTGTCAAACTGGGAATATTGA...ACAACACAGGGAGACTTGCTTACTGTGGAGCGTTTGTGTTCTTTCGAGTAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp GTAATGAAAAGCTGTCCCAGCAACATCAAATTTCCTAGGCCAGTCAATAGTCCAGATGCAGATATCCAGTaGATCCGCATTGCACTGGGT +
Preference number: 4 (lower is better)
Translates to: VMKSCPSNIKFPRPVNSPDADIQ*IRIALG
Trigger: ACCCAGTGCAATGCGGATTCACTGGATATCTGCATC...TGGACTATTGACTGGCCTAGGAAATTTGATGTTGCTGGGACAGCTTTTCATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR TCA 90 bp ACAAACTGCAAAAGGGTCTGCCTGGTTACCGAGCCAGTCTATCTTTTGCATGGTTCTCTAACTTCAATGTaGACAGAGCCTCTTGGTATC +
Preference number: 4 (lower is better)
Translates to: TNCKRVCLVTEPVYLLHGSLTSM*TEPLGI
Trigger: GATACCAAGAGGCTCTGTTCACATTGAAGTTAGAGA...ACCATGCAAAAGATAGACTGGCTCGGTAACCAGGCAGACCCTTTTGCAGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp CCCTGTGTTGTTTGGATCTCTCCAATCTGGCATTCCCTCCTAATACCGTGTCCAAAGTTAACTGTTCTTTaGAAAGGCGCAAGGGAATTC +
Preference number: 4 (lower is better)
Translates to: PCVVWISPIWHSLLIPCPKLTVL*KGAREF
Trigger: GAATTCCCTTGCGCCTTTTCAAAGAACAGTTAACTT...TGGACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAACAACACAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp CACATTTGCTTTCACACTGCTGCATTGATGGAGGCCGAACAGTTTCTAGACAGTCACAGAACAATCCGATaGTTGAATCCTGGACCACAT +
Preference number: 4 (lower is better)
Translates to: HICFHTAALMEAEQFLDSHRTIR*LNPGPH
Trigger: ATGTGGTCCAGGATTCAAGCATCGGATTGTTCTGTG...ACTGTCTAGAAACTGTTCGGCCTCCATCAATGCAGCAGTGTGAAAGCAAATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR GCA 90 bp CATTTGCTTTCACACTGCTGCATTGATGGAGGCCGAACAGTTTCTAGACAGTCACCACAAACCGTTCAATaGTCACTGATCTCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: HLLSHCCIDGGRTVSRQSPQTVQ*SLISSV
Trigger: GACAGAAGAGATCAGTGAGCATTGAACGGTTTGTGG...TGACTGTCTAGAAACTGTTCGGCCTCCATCAATGCAGCAGTGTGAAAGCAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR GCA 90 bp CAGTTTCCCTGGGGTTCCCTAAGTAGTCTATGTAGCTCACTACTTTTGGAAGGTCCACAAACCGTTCAATaGTCACTGATCTCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: QFPWGSLSSLCSSLLLEGPQTVQ*SLISSV
Trigger: GACAGAAGAGATCAGTGAGCATTGAACGGTTTGTGG...ACCTTCCAAAAGTAGTGAGCTACATAGACTACTTAGGGAACCCCAGGGAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp GATTTACTCGAAAGAACACAAACGCTCCACAGTAAGCAAGTCTCCCTGTGTTGTAATGTTCAATGTCTTTaGGGCCATGGTAGCCCACCA +
Preference number: 4 (lower is better)
Translates to: DLLERTQTLHSKQVSLCCNVQCL*GHGSPP
Trigger: TGGTGGGCTACCATGGCCGCAAAGACATTGAACATT...ACAACACAGGGAGACTTGCTTACTGTGGAGCGTTTGTGTTCTTTCGAGTAAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp TTTAGTAGGACTTTATCCCAGTGGCAGATACTGCTCCCAGGTGTAGGGTACCAGTTCCAGAATTTGACTTaGCCAAGAAACTGGGTTTCA +
Preference number: 4 (lower is better)
Translates to: FSRTLSQWQILLPGVGYQFQNLT*PRNWVS
Trigger: TGAAACCCAGTTTCTTGGGCAAGTCAAATTCTGGAA...CTGGTACCCTACACCTGGGAGCAGTATCTGCCACTGGGATAAAGTCCTACTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp GATTTACTCGAAAGAACACAAACGCTCCACAGTAAGCAAGTCTCCCTGTGTTGTTGGATCTCTCCAATCTaGCATTCCCTCCTAATACCG +
Preference number: 4 (lower is better)
Translates to: DLLERTQTLHSKQVSLCCWISPI*HSLLIP
Trigger: CGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCA...ACAACACAGGGAGACTTGCTTACTGTGGAGCGTTTGTGTTCTTTCGAGTAAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp GTTTGGATCTCTCCAATCTGGCATTCCCTCCTAATACCGTGTCCAGCACTTTGGGATCTCTTCTGTCTGTaGTGGATATGTGTGTTGTTA +
Preference number: 4 (lower is better)
Translates to: VWISPIWHSLLIPCPALWDLFCL*WICVLL
Trigger: TAACAACACACATATCCACCACAGACAGAAGAGATC...CCAAAGTGCTGGACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp TTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTATTGTTATTGTGTTTCCATCACTTTaGTGGGAGAGAATGGATTTC +
Preference number: 4 (lower is better)
Translates to: FWKVCHGGPASTDNAIVIVFPSL*WERMDF
Trigger: GAAATCCATTCTCTCCCACCAAAGTGATGGAAACAC...AATAACAATAGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp CAGTTTCCCTGGGGTTCCCTAAGTAGTCTATGTAGCTCACTACTTTTGGAAGGTAAAGAAAGTCACGCTTaGGAGGCTCATTATCAAGGC +
Preference number: 4 (lower is better)
Translates to: QFPWGSLSSLCSSLLLEGKESHA*EAHYQG
Trigger: GCCTTGATAATGAGCCTCCCAAGCGTGACTTTCTTT...ACCTTCCAAAAGTAGTGAGCTACATAGACTACTTAGGGAACCCCAGGGAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp ACAAACTGCAAAAGGGTCTGCCTGGTTACCGAGCCAGTCTATCTTTTGCATGGTACCATACCCCAGGTCTaGTTTCTGCATGAAATTGAA +
Preference number: 4 (lower is better)
Translates to: TNCKRVCLVTEPVYLLHGTIPQV*FLHEIE
Trigger: TTCAATTTCATGCAGAAACCAGACCTGGGGTATGGT...ACCATGCAAAAGATAGACTGGCTCGGTAACCAGGCAGACCCTTTTGCAGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp AGTGCAGATATCATATCTAGTAATAAGAACTGCATTATCGTGGTGGGCAATCCCTGGCAGCAAAGGGCCTaGTCCTTTGGTCTGTACCAT +
Preference number: 4 (lower is better)
Translates to: SADIISSNKNCIIVVGNPWQQRA*SFGLYH
Trigger: ATGGTACAGACCAAAGGACCAGGCCCTTTGCTGCCA...GGGATTGCCCACCACGATAATGCAGTTCTTATTACTAGATATGATATCTGCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CCA 90 bp ACATCTGGAACTCATCGTAATTGTCAACAAACTGCAAAAGGGTCTGCCTGGTTAAGACGGCACTTGGGCTaGTCTTCTAAGGGCATCTTA +
Preference number: 4 (lower is better)
Translates to: TSGTHRNCQQTAKGSAWLRRHLG*SSKGIL
Trigger: TAAGATGCCCTTAGAAGACCAGCCCAAGTGCCGTCT...TAACCAGGCAGACCCTTTTGCAGTTTGTTGACAATTACGATGAGTTCCAGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp CCCTGTGTTGTTTGGATCTCTCCAATCTGGCATTCCCTCCTAATACCGTGTCCAACTGACTTTCCGATTTaGCAGAATAAGAGATGCCTT +
Preference number: 4 (lower is better)
Translates to: PCVVWISPIWHSLLIPCPTDFPI*QNKRCL
Trigger: AAGGCATCTCTTATTCTGCCAAATCGGAAAGTCAGT...TGGACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAACAACACAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381055.8
3UTR CAA 72 bp TCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTATaGTTATTATTTAGGAATAGGGCATCATGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: SAMVAQPPLTML*LLFRNRASCSH
Trigger: ATGGCTACATGATGCCCTATTCCTAAATAATAACAATAGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp GTTTGGATCTCTCCAATCTGGCATTCCCTCCTAATACCGTGTCCAGCACTTTGGAGCAAAGCATTAGGCTaGTTAGTTACTAAAGTATGG +
Preference number: 4 (lower is better)
Translates to: VWISPIWHSLLIPCPALWSKALG*LVTKVW
Trigger: CCATACTTTAGTAACTAATCAGCCTAATGCTTTGCT...CCAAAGTGCTGGACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp CTCCTGAAGGTTTTAGCTACTTACGCTGGACTGTCACAGTGTCTTAGGGATGAGACTCCGTCTTCTCCTTaGGTGTTTATCATTTTTCAC +
Preference number: 4 (lower is better)
Translates to: LLKVLATYAGLSQCLRDETPSSP*VFIIFH
Trigger: GTGAAAAATGATAAACACTCAAGGAGAAGACGGAGT...CTCATCCCTAAGACACTGTGACAGTCCAGCGTAAGTAGCTAAAACCTTCAGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR TCA 90 bp TCTCCCTGTGTTGTTTGGATCTCTCCAATCTGGCATTCCCTCCTAATACCGTGTATCTCCAAGTTTGGCTaGTCTTCTGTGAGAACAATT +
Preference number: 4 (lower is better)
Translates to: SPCVVWISPIWHSLLIPCISKFG*SSVRTI
Trigger: AATTGTTCTCACAGAAGATCAGCCAAACTTGGAGAT...ACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAACAACACAGGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp CAGTTTCCCTGGGGTTCCCTAAGTAGTCTATGTAGCTCACTACTTTTGGAAGGTGGATGTAAACACAAGTaGGTTGGAGGGACTCAAATA +
Preference number: 4 (lower is better)
Translates to: QFPWGSLSSLCSSLLLEGGCKHK*VGGTQI
Trigger: TATTTGAGTCCCTCCAACTCACTTGTGTTTACATCC...ACCTTCCAAAAGTAGTGAGCTACATAGACTACTTAGGGAACCCCAGGGAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp GATTTACTCGAAAGAACACAAACGCTCCACAGTAAGCAAGTCTCCCTGTGTTGTCACAGAACAATCCGATaGTTGAATCCTGGACCACAT +
Preference number: 4 (lower is better)
Translates to: DLLERTQTLHSKQVSLCCHRTIR*LNPGPH
Trigger: ATGTGGTCCAGGATTCAAGCATCGGATTGTTCTGTG...ACAACACAGGGAGACTTGCTTACTGTGGAGCGTTTGTGTTCTTTCGAGTAAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp GTTTGGATCTCTCCAATCTGGCATTCCCTCCTAATACCGTGTCCAGCACTTTGGCACTGCTTTAAACTATaGCCCTCATTATTGTTCAGT +
Preference number: 4 (lower is better)
Translates to: VWISPIWHSLLIPCPALWHCFKL*PSLLFS
Trigger: ACTGAACAATAATGAGGGGCATAGTTTAAAGCAGTG...CCAAAGTGCTGGACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp ATTATCTTAATGGTCCAAGGAGGTAAACAGGCTATTGGATTTACTCGAAAGAACTACTTTTGGAAGGTCTaGCATGGTGGCCCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: IILMVQGGKQAIGFTRKNYFWKV*HGGPAS
Trigger: GGAGGCTGGGCCACCATGGCAGACCTTCCAAAAGTA...GTTCTTTCGAGTAAATCCAATAGCCTGTTTACCTCCTTGGACCATTAAGATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp ACAAACTGCAAAAGGGTCTGCCTGGTTACCGAGCCAGTCTATCTTTTGCATGGTTTTGGTGGGAGAGAATaGATTTCTGCCATTTACAGA +
Preference number: 4 (lower is better)
Translates to: TNCKRVCLVTEPVYLLHGFGGRE*ISAIYR
Trigger: TCTGTAAATGGCAGAAATCCATTCTCTCCCACCAAA...ACCATGCAAAAGATAGACTGGCTCGGTAACCAGGCAGACCCTTTTGCAGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp ATTATCTTAATGGTCCAAGGAGGTAAACAGGCTATTGGATTTACTCGAAAGAACGAATCCGCATTGCACTaGGTCCCATCGATCACCGCA +
Preference number: 4 (lower is better)
Translates to: IILMVQGGKQAIGFTRKNESALH*VPSITA
Trigger: TGCGGTGATCGATGGGACCCAGTGCAATGCGGATTC...GTTCTTTCGAGTAAATCCAATAGCCTGTTTACCTCCTTGGACCATTAAGATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp TTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTATTGTTATTAGCAAAGCATTAGGCTaGTTAGTTACTAAAGTATGG +
Preference number: 4 (lower is better)
Translates to: FWKVCHGGPASTDNAIVISKALG*LVTKVW
Trigger: CCATACTTTAGTAACTAATCAGCCTAATGCTTTGCT...AATAACAATAGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp ACATCTGGAACTCATCGTAATTGTCAACAAACTGCAAAAGGGTCTGCCTGGTTAGTCAGGAATTCCTCTTaGGAACTGTATGAAAGCCTG +
Preference number: 4 (lower is better)
Translates to: TSGTHRNCQQTAKGSAWLVRNSS*ELYESL
Trigger: CAGGCTTTCATACAGTTCTCAAGAGGAATTCCTGAC...TAACCAGGCAGACCCTTTTGCAGTTTGTTGACAATTACGATGAGTTCCAGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp AAGGAGGTAAACAGGCTATTGGATTTACTCGAAAGAACACAAACGCTCCACAGTAGTTTTGCTGCTTCATaGCCTTTCGTCCCACAAGAA +
Preference number: 4 (lower is better)
Translates to: KEVNRLLDLLERTQTLHSSFAAS*PFVPQE
Trigger: TTCTTGTGGGACGAAAGGTCATGAAGCAGCAAAACT...ACTGTGGAGCGTTTGTGTTCTTTCGAGTAAATCCAATAGCCTGTTTACCTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp AAGGAGGTAAACAGGCTATTGGATTTACTCGAAAGAACACAAACGCTCCACAGTGAAAACATTCCATGCTaGTTGTCCACAGCAAACCTG +
Preference number: 4 (lower is better)
Translates to: KEVNRLLDLLERTQTLHSENIPC*LSTANL
Trigger: CAGGTTTGCTGTGGACAATCAGCATGGAATGTTTTC...ACTGTGGAGCGTTTGTGTTCTTTCGAGTAAATCCAATAGCCTGTTTACCTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp CATTTGCTTTCACACTGCTGCATTGATGGAGGCCGAACAGTTTCTAGACAGTCAAAGTTAACTGTTCTTTaGAAAGGCGCAAGGGAATTC +
Preference number: 4 (lower is better)
Translates to: HLLSHCCIDGGRTVSRQSKLTVL*KGAREF
Trigger: GAATTCCCTTGCGCCTTTTCAAAGAACAGTTAACTT...TGACTGTCTAGAAACTGTTCGGCCTCCATCAATGCAGCAGTGTGAAAGCAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR GCA 90 bp TTACTTGAAACTGTTTCATCCTGTTACATTCTGTGCGTGGCTCCCTCTAGAAAGCATCACAAGTCTTGCTaGATTCCAACCAATCCCCAA +
Preference number: 4 (lower is better)
Translates to: LLETVSSCYILCVAPSRKHHKSC*IPTNPQ
Trigger: TTGGGGATTGGTTGGAATGCAGCAAGACTTGTGATG...CTTTCTAGAGGGAGCCACGCACAGAATGTAACAGGATGAAACAGTTTCAAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp GGCCACAGCTGGATAAAGAAAGTCACGCTTGGGAGGCTCATTATCAAGGCAAGTTTTTATCCAACATCCTaGACTTTCTTCTATATCTGG +
Preference number: 4 (lower is better)
Translates to: GHSWIKKVTLGRLIIKASFYPTS*TFFYIW
Trigger: CCAGATATAGAAGAAAGTGCAGGATGTTGGATAAAA...ACTTGCCTTGATAATGAGCCTCCCAAGCGTGACTTTCTTTATCCAGCTGTGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR GCA 90 bp GTTTGGATCTCTCCAATCTGGCATTCCCTCCTAATACCGTGTCCAGCACTTTGGTTTTATCCAACATCCTaGACTTTCTTCTATATCTGG +
Preference number: 4 (lower is better)
Translates to: VWISPIWHSLLIPCPALWFYPTS*TFFYIW
Trigger: CCAGATATAGAAGAAAGTGCAGGATGTTGGATAAAA...CCAAAGTGCTGGACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp ACATCTGGAACTCATCGTAATTGTCAACAAACTGCAAAAGGGTCTGCCTGGTTACACCATCATTTTGTCTaGCACTACCAATGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: TSGTHRNCQQTAKGSAWLHHHFV*HYQCLH
Trigger: GTGGAGACATTGGTAGTGGCAGACAAAATGATGGTG...TAACCAGGCAGACCCTTTTGCAGTTTGTTGACAATTACGATGAGTTCCAGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp CTCCTGAAGGTTTTAGCTACTTACGCTGGACTGTCACAGTGTCTTAGGGATGAGTCTAGTAATAAGAACTaGATTATCGTGGTGGGCAAT +
Preference number: 4 (lower is better)
Translates to: LLKVLATYAGLSQCLRDESSNKN*IIVVGN
Trigger: ATTGCCCACCACGATAATGCAGTTCTTATTACTAGA...CTCATCCCTAAGACACTGTGACAGTCCAGCGTAAGTAGCTAAAACCTTCAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR GCA 90 bp ATTATCTTAATGGTCCAAGGAGGTAAACAGGCTATTGGATTTACTCGAAAGAACCAATGGCATCACATGTaGTTCCGTCCCCTCCACAGA +
Preference number: 4 (lower is better)
Translates to: IILMVQGGKQAIGFTRKNQWHHM*FRPLHR
Trigger: TCTGTGGAGGGGACGGAAGCACATGTGATGCCATTG...GTTCTTTCGAGTAAATCCAATAGCCTGTTTACCTCCTTGGACCATTAAGATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp CAGTTTCCCTGGGGTTCCCTAAGTAGTCTATGTAGCTCACTACTTTTGGAAGGTTTCCAGAATTTGACTTaGCCAAGAAACTGGGTTTCA +
Preference number: 4 (lower is better)
Translates to: QFPWGSLSSLCSSLLLEGFQNLT*PRNWVS
Trigger: TGAAACCCAGTTTCTTGGGCAAGTCAAATTCTGGAA...ACCTTCCAAAAGTAGTGAGCTACATAGACTACTTAGGGAACCCCAGGGAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp AAGGAGGTAAACAGGCTATTGGATTTACTCGAAAGAACACAAACGCTCCACAGTTTAGGTGTTGGTGCATaGATGGTGTACACCTGTGTA +
Preference number: 4 (lower is better)
Translates to: KEVNRLLDLLERTQTLHSLGVGA*MVYTCV
Trigger: TACACAGGTGTACACCATGCATGCACCAACACCTAA...ACTGTGGAGCGTTTGTGTTCTTTCGAGTAAATCCAATAGCCTGTTTACCTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp ACATCTGGAACTCATCGTAATTGTCAACAAACTGCAAAAGGGTCTGCCTGGTTATCTCCCTGTGTTGTTTaGATCTCTCCAATCTGGCAT +
Preference number: 4 (lower is better)
Translates to: TSGTHRNCQQTAKGSAWLSPCVV*ISPIWH
Trigger: ATGCCAGATTGGAGAGATCCAAACAACACAGGGAGA...TAACCAGGCAGACCCTTTTGCAGTTTGTTGACAATTACGATGAGTTCCAGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp CAGTTTCCCTGGGGTTCCCTAAGTAGTCTATGTAGCTCACTACTTTTGGAAGGTGCTTGGAATCCTCTGTaGTATTCTTTAAAGGTTCGA +
Preference number: 4 (lower is better)
Translates to: QFPWGSLSSLCSSLLLEGAWNPL*YSLKVR
Trigger: TCGAACCTTTAAAGAATACCACAGAGGATTCCAAGC...ACCTTCCAAAAGTAGTGAGCTACATAGACTACTTAGGGAACCCCAGGGAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp TTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTATTGTTATTCTCTTCTGTCTGTGGTaGATATGTGTGTTGTTAATT +
Preference number: 4 (lower is better)
Translates to: FWKVCHGGPASTDNAIVILFCLW*ICVLLI
Trigger: AATTAACAACACACATATCCACCACAGACAGAAGAG...AATAACAATAGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp AAGGAGGTAAACAGGCTATTGGATTTACTCGAAAGAACACAAACGCTCCACAGTGAGGTTGCTCCATACTaGAAACGACATTGCTCATCA +
Preference number: 4 (lower is better)
Translates to: KEVNRLLDLLERTQTLHSEVAPY*KRHCSS
Trigger: TGATGAGCAATGTCGTTTCCAGTATGGAGCAACCTC...ACTGTGGAGCGTTTGTGTTCTTTCGAGTAAATCCAATAGCCTGTTTACCTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp CATTTGCTTTCACACTGCTGCATTGATGGAGGCCGAACAGTTTCTAGACAGTCAACTTGCCCAAGAAACTaGGTTTCACATTTAATTGCC +
Preference number: 4 (lower is better)
Translates to: HLLSHCCIDGGRTVSRQSTCPRN*VSHLIA
Trigger: GGCAATTAAATGTGAAACCCAGTTTCTTGGGCAAGT...TGACTGTCTAGAAACTGTTCGGCCTCCATCAATGCAGCAGTGTGAAAGCAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CCA 90 bp TTACTTGAAACTGTTTCATCCTGTTACATTCTGTGCGTGGCTCCCTCTAGAAAGGTGTTGGTGCATGCATaGTGTACACCTGTGTACAAT +
Preference number: 4 (lower is better)
Translates to: LLETVSSCYILCVAPSRKVLVHA*CTPVYN
Trigger: ATTGTACACAGGTGTACACCATGCATGCACCAACAC...CTTTCTAGAGGGAGCCACGCACAGAATGTAACAGGATGAAACAGTTTCAAGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp AAGGAGGTAAACAGGCTATTGGATTTACTCGAAAGAACACAAACGCTCCACAGTCTTCACTTCCATAGTTaGCCAAGTCATAACAGCTAC +
Preference number: 4 (lower is better)
Translates to: KEVNRLLDLLERTQTLHSLHFHS*PSHNSY
Trigger: GTAGCTGTTATGACTTGGTCAACTATGGAAGTGAAG...ACTGTGGAGCGTTTGTGTTCTTTCGAGTAAATCCAATAGCCTGTTTACCTCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp ACATCTGGAACTCATCGTAATTGTCAACAAACTGCAAAAGGGTCTGCCTGGTTACACAGCTGCAGTAACTaGTGCACTGCTTTAAACTAT +
Preference number: 4 (lower is better)
Translates to: TSGTHRNCQQTAKGSAWLHSCSN*CTALNY
Trigger: ATAGTTTAAAGCAGTGCATCAGTTACTGCAGCTGTG...TAACCAGGCAGACCCTTTTGCAGTTTGTTGACAATTACGATGAGTTCCAGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp TTGGAAATCATATGTATCTCACGGGGTTTAATCATTAGGGTACATTTACCGTTCCTGTTTGCCCTTCACTaGATGGCTAAGACGGCACTT +
Preference number: 4 (lower is better)
Translates to: LEIICISRGLIIRVHLPFLFALH*MAKTAL
Trigger: AAGTGCCGTCTTAGCCATTCAGTGAAGGGCAAACAG...GAACGGTAAATGTACCCTAATGATTAAACCCCGTGAGATACATATGATTTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp GATTTACTCGAAAGAACACAAACGCTCCACAGTAAGCAAGTCTCCCTGTGTTGTTTCGTTCTGTGTTACTaGGGATACCTATGTGACATT +
Preference number: 4 (lower is better)
Translates to: DLLERTQTLHSKQVSLCCFVLCY*GYLCDI
Trigger: AATGTCACATAGGTATCCTCAGTAACACAGAACGAA...ACAACACAGGGAGACTTGCTTACTGTGGAGCGTTTGTGTTCTTTCGAGTAAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp CATTTGCTTTCACACTGCTGCATTGATGGAGGCCGAACAGTTTCTAGACAGTCACACTGCTTTAAACTATaGCCCTCATTATTGTTCAGT +
Preference number: 4 (lower is better)
Translates to: HLLSHCCIDGGRTVSRQSHCFKL*PSLLFS
Trigger: ACTGAACAATAATGAGGGGCATAGTTTAAAGCAGTG...TGACTGTCTAGAAACTGTTCGGCCTCCATCAATGCAGCAGTGTGAAAGCAAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR GCA 90 bp CAGTTTCCCTGGGGTTCCCTAAGTAGTCTATGTAGCTCACTACTTTTGGAAGGTCCCAGGTCTGGTTTCTaGATGAAATTGAAATGTTTT +
Preference number: 4 (lower is better)
Translates to: QFPWGSLSSLCSSLLLEGPRSGF*MKLKCF
Trigger: AAAACATTTCAATTTCATGCAGAAACCAGACCTGGG...ACCTTCCAAAAGTAGTGAGCTACATAGACTACTTAGGGAACCCCAGGGAAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp ACATCTGGAACTCATCGTAATTGTCAACAAACTGCAAAAGGGTCTGCCTGGTTAAACCTATGCCTAAAATaGCACAGAAACTGCCCATCT +
Preference number: 4 (lower is better)
Translates to: TSGTHRNCQQTAKGSAWLNLCLK*HRNCPS
Trigger: AGATGGGCAGTTTCTGTGGCATTTTAGGCATAGGTT...TAACCAGGCAGACCCTTTTGCAGTTTGTTGACAATTACGATGAGTTCCAGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp ACATCTGGAACTCATCGTAATTGTCAACAAACTGCAAAAGGGTCTGCCTGGTTACCAGCCAACTTGAATTaGAGCAGGAGAAAATTTTGG +
Preference number: 4 (lower is better)
Translates to: TSGTHRNCQQTAKGSAWLPANLN*SRRKFW
Trigger: CCAAAATTTTCTCCTGCTGCAATTCAAGTTGGCTGG...TAACCAGGCAGACCCTTTTGCAGTTTGTTGACAATTACGATGAGTTCCAGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381055.8
CDS-3UTR GCA 90 bp ACAAACTGCAAAAGGGTCTGCCTGGTTACCGAGCCAGTCTATCTTTTGCATGGTTATGCAAATAACATGTaGAGAGCATCAAAAGGTATC +
Preference number: 4 (lower is better)
Translates to: TNCKRVCLVTEPVYLLHGYANNM*RASKGI
Trigger: GATACCTTTTGATGCTCTGCACATGTTATTTGCATA...ACCATGCAAAAGATAGACTGGCTCGGTAACCAGGCAGACCCTTTTGCAGTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381055.8
CDS-3UTR GCA 90 bp ACATCTGGAACTCATCGTAATTGTCAACAAACTGCAAAAGGGTCTGCCTGGTTAACCAGCCAGTTATTCTaGAGCCAGAATAAAACCCTA +
Preference number: 4 (lower is better)
Translates to: TSGTHRNCQQTAKGSAWLTSQLF*SQNKTL
Trigger: TAGGGTTTTATTCTGGCTGCAGAATAACTGGCTGGT...TAACCAGGCAGACCCTTTTGCAGTTTGTTGACAATTACGATGAGTTCCAGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381055.8
CDS-3UTR CCA 90 bp AAGGAGGTAAACAGGCTATTGGATTTACTCGAAAGAACACAAACGCTCCACAGTGAACTTCAGCACCAGTaGGCAATAAGCCACTTTATT +
Preference number: 4 (lower is better)
Translates to: KEVNRLLDLLERTQTLHSELQHQ*AISHFI
Trigger: AATAAAGTGGCTTATTGCCCACTGGTGCTGAAGTTC...ACTGTGGAGCGTTTGTGTTCTTTCGAGTAAATCCAATAGCCTGTTTACCTCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp TTGGAAATCATATGTATCTCACGGGGTTTAATCATTAGGGTACATTTACCGTTCGTGGGTCAGTGTCCTTaGCAGGTCTTACAACACATC +
Preference number: 4 (lower is better)
Translates to: LEIICISRGLIIRVHLPFVGQCP*QVLQHI
Trigger: GATGTGTTGTAAGACCTGCCAAGGACACTGACCCAC...GAACGGTAAATGTACCCTAATGATTAAACCCCGTGAGATACATATGATTTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp TTACTTGAAACTGTTTCATCCTGTTACATTCTGTGCGTGGCTCCCTCTAGAAAGAGGGACTTGTCTGCATaGTGGTTTATCTCCAAGTTT +
Preference number: 4 (lower is better)
Translates to: LLETVSSCYILCVAPSRKRDLSA*WFISKF
Trigger: AAACTTGGAGATAAACCACCATGCAGACAAGTCCCT...CTTTCTAGAGGGAGCCACGCACAGAATGTAACAGGATGAAACAGTTTCAAGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp ATTATCTTAATGGTCCAAGGAGGTAAACAGGCTATTGGATTTACTCGAAAGAACTGTCCCCTCAGCTGCTaGAATACTGTTGGTGACACA +
Preference number: 4 (lower is better)
Translates to: IILMVQGGKQAIGFTRKNCPLSC*NTVGDT
Trigger: TGTGTCACCAACAGTATTCCAGCAGCTGAGGGGACA...GTTCTTTCGAGTAAATCCAATAGCCTGTTTACCTCCTTGGACCATTAAGATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp TTACTTGAAACTGTTTCATCCTGTTACATTCTGTGCGTGGCTCCCTCTAGAAAGAATGGGGAGGCATTTTaGACACAAAGCACATTCATC +
Preference number: 4 (lower is better)
Translates to: LLETVSSCYILCVAPSRKNGEAF*TQSTFI
Trigger: GATGAATGTGCTTTGTGTCCAAAATGCCTCCCCATT...CTTTCTAGAGGGAGCCACGCACAGAATGTAACAGGATGAAACAGTTTCAAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp ATTATCTTAATGGTCCAAGGAGGTAAACAGGCTATTGGATTTACTCGAAAGAACAGCCTGTGGTCACTATaGAATTCCGATGAAGCCATG +
Preference number: 4 (lower is better)
Translates to: IILMVQGGKQAIGFTRKNSLWSL*NSDEAM
Trigger: CATGGCTTCATCGGAATTTCATAGTGACCACAGGCT...GTTCTTTCGAGTAAATCCAATAGCCTGTTTACCTCCTTGGACCATTAAGATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp AAGGAGGTAAACAGGCTATTGGATTTACTCGAAAGAACACAAACGCTCCACAGTACTCCGTCTTCTCCTTaGGTGTTTATCATTTTTCAC +
Preference number: 4 (lower is better)
Translates to: KEVNRLLDLLERTQTLHSTPSSP*VFIIFH
Trigger: GTGAAAAATGATAAACACTCAAGGAGAAGACGGAGT...ACTGTGGAGCGTTTGTGTTCTTTCGAGTAAATCCAATAGCCTGTTTACCTCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp ATTATCTTAATGGTCCAAGGAGGTAAACAGGCTATTGGATTTACTCGAAAGAACTGCAATGGTAAAAGCTaGACCCAGGCCAATGTCTTC +
Preference number: 4 (lower is better)
Translates to: IILMVQGGKQAIGFTRKNCNGKS*TQANVF
Trigger: GAAGACATTGGCCTGGGTTCAGCTTTTACCATTGCA...GTTCTTTCGAGTAAATCCAATAGCCTGTTTACCTCCTTGGACCATTAAGATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp AGTGCAGATATCATATCTAGTAATAAGAACTGCATTATCGTGGTGGGCAATCCCTACTGGAAACGACATTaGTCATCAGCATCATACACC +
Preference number: 4 (lower is better)
Translates to: SADIISSNKNCIIVVGNPYWKRH*SSASYT
Trigger: GGTGTATGATGCTGATGAGCAATGTCGTTTCCAGTA...GGGATTGCCCACCACGATAATGCAGTTCTTATTACTAGATATGATATCTGCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR GCA 90 bp GCATTATCGTGGTGGGCAATCCCATTTTCTGGAATGGTGTTTCCATCACTTTGGAAATCAGATCTGGATTaGAAACCTATGCCTAAAATG +
Preference number: 4 (lower is better)
Translates to: ALSWWAIPFSGMVFPSLWKSDLD*KPMPKM
Trigger: CATTTTAGGCATAGGTTTGCAATCCAGATCTGATTT...CCAAAGTGATGGAAACACCATTCCAGAAAATGGGATTGCCCACCACGATAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CCA 90 bp TTACTTGAAACTGTTTCATCCTGTTACATTCTGTGCGTGGCTCCCTCTAGAAAGTCTTTGATTTTCAGGTaGCTTACTGTCAGGATCACA +
Preference number: 4 (lower is better)
Translates to: LLETVSSCYILCVAPSRKSLIFR*LTVRIT
Trigger: TGTGATCCTGACAGTAAGCCACCTGAAAATCAAAGA...CTTTCTAGAGGGAGCCACGCACAGAATGTAACAGGATGAAACAGTTTCAAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp GCATTATCGTGGTGGGCAATCCCATTTTCTGGAATGGTGTTTCCATCACTTTGGAATCACGGTAAAGTTTaGCAACCTGACAATATTCAT +
Preference number: 4 (lower is better)
Translates to: ALSWWAIPFSGMVFPSLWNHGKV*QPDNIH
Trigger: ATGAATATTGTCAGGTTGCCAAACTTTACCGTGATT...CCAAAGTGATGGAAACACCATTCCAGAAAATGGGATTGCCCACCACGATAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CCA 90 bp GTAATGAAAAGCTGTCCCAGCAACATCAAATTTCCTAGGCCAGTCAATAGTCCAGTTTATCTCCAAGTTTaGCTGATCTTCTGTGAGAAC +
Preference number: 4 (lower is better)
Translates to: VMKSCPSNIKFPRPVNSPVYLQV*LIFCEN
Trigger: GTTCTCACAGAAGATCAGCCAAACTTGGAGATAAAC...TGGACTATTGACTGGCCTAGGAAATTTGATGTTGCTGGGACAGCTTTTCATTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CCA 90 bp AGTGCAGATATCATATCTAGTAATAAGAACTGCATTATCGTGGTGGGCAATCCCGTGTTTCCATCACTTTaGTGGGAGAGAATGGATTTC +
Preference number: 4 (lower is better)
Translates to: SADIISSNKNCIIVVGNPVFPSL*WERMDF
Trigger: GAAATCCATTCTCTCCCACCAAAGTGATGGAAACAC...GGGATTGCCCACCACGATAATGCAGTTCTTATTACTAGATATGATATCTGCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR TCA 90 bp TTGGAAATCATATGTATCTCACGGGGTTTAATCATTAGGGTACATTTACCGTTCGAACAATCCGATGCTTaGATCCTGGACCACATTTTG +
Preference number: 4 (lower is better)
Translates to: LEIICISRGLIIRVHLPFEQSDA*ILDHIL
Trigger: CAAAATGTGGTCCAGGATTCAAGCATCGGATTGTTC...GAACGGTAAATGTACCCTAATGATTAAACCCCGTGAGATACATATGATTTCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp AGTGCAGATATCATATCTAGTAATAAGAACTGCATTATCGTGGTGGGCAATCCCATCTCCAAGTTTGGCTaGTCTTCTGTGAGAACAATT +
Preference number: 4 (lower is better)
Translates to: SADIISSNKNCIIVVGNPISKFG*SSVRTI
Trigger: AATTGTTCTCACAGAAGATCAGCCAAACTTGGAGAT...GGGATTGCCCACCACGATAATGCAGTTCTTATTACTAGATATGATATCTGCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR TCA 90 bp TTGGAAATCATATGTATCTCACGGGGTTTAATCATTAGGGTACATTTACCGTTCCCCAAATTCTGTTCTTaGAGCAGAACCATGACGATG +
Preference number: 4 (lower is better)
Translates to: LEIICISRGLIIRVHLPFPKFCS*SRTMTM
Trigger: CATCGTCATGGTTCTGCTTCAAGAACAGAATTTGGG...GAACGGTAAATGTACCCTAATGATTAAACCCCGTGAGATACATATGATTTCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp ATTATCTTAATGGTCCAAGGAGGTAAACAGGCTATTGGATTTACTCGAAAGAACCCAGGATGTGAAACTTaGAGATGGGGAAAATACGAG +
Preference number: 4 (lower is better)
Translates to: IILMVQGGKQAIGFTRKNPGCET*RWGKYE
Trigger: CTCGTATTTTCCCCATCTTCAAGTTTCACATCCTGG...GTTCTTTCGAGTAAATCCAATAGCCTGTTTACCTCCTTGGACCATTAAGATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp TTGGAAATCATATGTATCTCACGGGGTTTAATCATTAGGGTACATTTACCGTTCCGCAGTAATGTGAGCTaGCATAAGTTTTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: LEIICISRGLIIRVHLPFRSNVS*HKFCCF
Trigger: GAAGCAGCAAAACTTATGGCAGCTCACATTACTGCG...GAACGGTAAATGTACCCTAATGATTAAACCCCGTGAGATACATATGATTTCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp ACATCTGGAACTCATCGTAATTGTCAACAAACTGCAAAAGGGTCTGCCTGGTTACCCAGGTCTGGTTTCTaGATGAAATTGAAATGTTTT +
Preference number: 4 (lower is better)
Translates to: TSGTHRNCQQTAKGSAWLPRSGF*MKLKCF
Trigger: AAAACATTTCAATTTCATGCAGAAACCAGACCTGGG...TAACCAGGCAGACCCTTTTGCAGTTTGTTGACAATTACGATGAGTTCCAGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp AAGGAGGTAAACAGGCTATTGGATTTACTCGAAAGAACACAAACGCTCCACAGTCTCTTCTGTCTGTGGTaGATATGTGTGTTGTTAATT +
Preference number: 4 (lower is better)
Translates to: KEVNRLLDLLERTQTLHSLFCLW*ICVLLI
Trigger: AATTAACAACACACATATCCACCACAGACAGAAGAG...ACTGTGGAGCGTTTGTGTTCTTTCGAGTAAATCCAATAGCCTGTTTACCTCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp AGTGCAGATATCATATCTAGTAATAAGAACTGCATTATCGTGGTGGGCAATCCCGATCTCTTCTGTCTGTaGTGGATATGTGTGTTGTTA +
Preference number: 4 (lower is better)
Translates to: SADIISSNKNCIIVVGNPDLFCL*WICVLL
Trigger: TAACAACACACATATCCACCACAGACAGAAGAGATC...GGGATTGCCCACCACGATAATGCAGTTCTTATTACTAGATATGATATCTGCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CCA 90 bp ATTATCTTAATGGTCCAAGGAGGTAAACAGGCTATTGGATTTACTCGAAAGAACTGTCCACAGCAAACCTaGGAGTTGTTTAGATTGGCT +
Preference number: 4 (lower is better)
Translates to: IILMVQGGKQAIGFTRKNCPQQT*ELFRLA
Trigger: AGCCAATCTAAACAACTCCCAGGTTTGCTGTGGACA...GTTCTTTCGAGTAAATCCAATAGCCTGTTTACCTCCTTGGACCATTAAGATAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp TTGGAAATCATATGTATCTCACGGGGTTTAATCATTAGGGTACATTTACCGTTCACAGTCTTTCAGCACTaGGTTTATAGACTTGCACAG +
Preference number: 4 (lower is better)
Translates to: LEIICISRGLIIRVHLPFTVFQH*VYRLAQ
Trigger: CTGTGCAAGTCTATAAACTCAGTGCTGAAAGACTGT...GAACGGTAAATGTACCCTAATGATTAAACCCCGTGAGATACATATGATTTCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR GCA 90 bp TTGGAAATCATATGTATCTCACGGGGTTTAATCATTAGGGTACATTTACCGTTCCATCTGTCTGAAGTATaGTCGACTGCAGAACTTGAA +
Preference number: 4 (lower is better)
Translates to: LEIICISRGLIIRVHLPFHLSEV*STAELE
Trigger: TTCAAGTTCTGCAGTCGAGCATACTTCAGACAGATG...GAACGGTAAATGTACCCTAATGATTAAACCCCGTGAGATACATATGATTTCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CCA 90 bp TTGGAAATCATATGTATCTCACGGGGTTTAATCATTAGGGTACATTTACCGTTCAGAACTGCATTATCGTaGTGGGCAATCCCATTTTCT +
Preference number: 4 (lower is better)
Translates to: LEIICISRGLIIRVHLPFRTALS*WAIPFS
Trigger: AGAAAATGGGATTGCCCACCACGATAATGCAGTTCT...GAACGGTAAATGTACCCTAATGATTAAACCCCGTGAGATACATATGATTTCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR TCA 90 bp TTGGAAATCATATGTATCTCACGGGGTTTAATCATTAGGGTACATTTACCGTTCTTCATACCAAAATTGTaGCCAATCTCATGTGCAATG +
Preference number: 4 (lower is better)
Translates to: LEIICISRGLIIRVHLPFFIPKL*PISCAM
Trigger: CATTGCACATGAGATTGGTCACAATTTTGGTATGAA...GAACGGTAAATGTACCCTAATGATTAAACCCCGTGAGATACATATGATTTCCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp TTCTGTGCGTGGCTCCCTCTAGAAAGGCACTCTGATGCTGCCCCGGGGGATGCCTGTGGGTCAGTGTCCTaGGCAGGTCTTACAACACAT +
Preference number: 5 (lower is better)
Translates to: FCAWLPLERHSDAAPGDACGSVS*AGLTTH
Trigger: ATGTGTTGTAAGACCTGCCAAGGACACTGACCCACA...GGCATCCCCCGGGGCAGCATCAGAGTGCCTTTCTAGAGGGAGCCACGCACAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp TTCTGTGCGTGGCTCCCTCTAGAAAGGCACTCTGATGCTGCCCCGGGGGATGCCAAGCTATCGAGGGACTaGTCTGCATGGTGGTTTATC +
Preference number: 5 (lower is better)
Translates to: FCAWLPLERHSDAAPGDAKLSRD*SAWWFI
Trigger: GATAAACCACCATGCAGACAAGTCCCTCGATAGCTT...GGCATCCCCCGGGGCAGCATCAGAGTGCCTTTCTAGAGGGAGCCACGCACAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp ATCCGGGCCCTGGTGATTCCTCTTGTATCATCAATAGCTCTCTCTGGAAGGCTCTGCAGAGCACTGCCCTaGTGCGCATCCCACCATCAC +
Preference number: 5 (lower is better)
Translates to: IRALVIPLVSSIALSGRLCRALP*CASHHH
Trigger: GTGATGGTGGGATGCGCACAAGGGCAGTGCTCTGCA...GAGCCTTCCAGAGAGAGCTATTGATGATACAAGAGGAATCACCAGGGCCCGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp ACTGTAGTCCAGCGTCTCCTCCTCAGAAGGTCCGATCTTCCTGATGCAGAGCACGCTCGACTGCAGAACTaGAACTTCAGCACCAGTGGG +
Preference number: 5 (lower is better)
Translates to: TVVQRLLLRRSDLPDAEHARLQN*NFSTSG
Trigger: CCCACTGGTGCTGAAGTTCAAGTTCTGCAGTCGAGC...GTGCTCTGCATCAGGAAGATCGGACCTTCTGAGGAGGAGACGCTGGACTACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CAA 90 bp GTGGCAGCAAAGGGCCTGGTCCTTTGGTCTGTACCATACCCCAGGTCTGGTTTCTACATTGGCGGGAGGTaGCTCCATACTGGAAACGAC +
Preference number: 5 (lower is better)
Translates to: VAAKGLVLWSVPYPRSGFYIGGR*LHTGND
Trigger: GTCGTTTCCAGTATGGAGCAACCTCCCGCCAATGTA...GAAACCAGACCTGGGGTATGGTACAGACCAAAGGACCAGGCCCTTTGCTGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp CTAAGGCATCCTGTGTGGTGGCAGCAAAGGGCCTGGTCCTTTGGTCTGTACCATAAAGGGCCTGGTCCTTaGGTCTGTACCATACCCCAG +
Preference number: 5 (lower is better)
Translates to: LRHPVWWQQRAWSFGLYHKGPGP*VCTIPQ
Trigger: CTGGGGTATGGTACAGACCAAAGGACCAGGCCCTTT...ATGGTACAGACCAAAGGACCAGGCCCTTTGCTGCCACCACACAGGATGCCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp TTCTGTGCGTGGCTCCCTCTAGAAAGGCACTCTGATGCTGCCCCGGGGGATGCCTGTTTAGATTGGCTTTaGGTGTCTGAGGGTCTGTCT +
Preference number: 5 (lower is better)
Translates to: FCAWLPLERHSDAAPGDACLDWL*VSEGLS
Trigger: AGACAGACCCTCAGACACCAAAAGCCAATCTAAACA...GGCATCCCCCGGGGCAGCATCAGAGTGCCTTTCTAGAGGGAGCCACGCACAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp GCAGCAAAGGGCCTGGTCCTTTGGTCTGTACCATACCCCAGGTCTGGTTTCTGCCTGGAAGGCTCAGGGTaGAGAACTGTGGTGTTGAGA +
Preference number: 5 (lower is better)
Translates to: AAKGLVLWSVPYPRSGFCLEGSG*RTVVLR
Trigger: TCTCAACACCACAGTTCTCAACCCTGAGCCTTCCAG...GCAGAAACCAGACCTGGGGTATGGTACAGACCAAAGGACCAGGCCCTTTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp GCAGCAAAGGGCCTGGTCCTTTGGTCTGTACCATACCCCAGGTCTGGTTTCTGCCTACCCATGGGCTGTTaGCCCTTCACTGAATGGCTA +
Preference number: 5 (lower is better)
Translates to: AAKGLVLWSVPYPRSGFCLPMGC*PFTEWL
Trigger: TAGCCATTCAGTGAAGGGCAAACAGCCCATGGGTAG...GCAGAAACCAGACCTGGGGTATGGTACAGACCAAAGGACCAGGCCCTTTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp ACTGTAGTCCAGCGTCTCCTCCTCAGAAGGTCCGATCTTCCTGATGCAGAGCACGCTGCTGGAATACTGTaGGTGACACAGCGGTTGCTT +
Preference number: 5 (lower is better)
Translates to: TVVQRLLLRRSDLPDAEHAAGIL*VTQRLL
Trigger: AAGCAACCGCTGTGTCACCAACAGTATTCCAGCAGC...GTGCTCTGCATCAGGAAGATCGGACCTTCTGAGGAGGAGACGCTGGACTACAGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS TCA 90 bp CCTGTCTTTGGACACCAGTCCATGCAGCAGCAAGGGTGTTGGCTTTaGAGGAAGCCAACTGTCCTGCTCTCCCAGCCAGAGGTAAAGAAT +
Preference number: 5 (lower is better)
Translates to: PVFGHQSMQQQGCWL*RKPTVLLSQPEVKN
Trigger: ATTCTTTACCTCTGGCTGGGAGAGCAGGACAGTTGGCTTCCTTCAAAGCCAACACCCTTGCTGCTGCATGGACTGGTGTCCAAAGACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417396.2
CDS-3UTR CAA 90 bp GCAGCAAAGGGCCTGGTCCTTTGGTCTGTACCATACCCCAGGTCTGGTTTCTGCTTTCACACTGCTGCATaGATGGAGGCCGAACAGTTT +
Preference number: 5 (lower is better)
Translates to: AAKGLVLWSVPYPRSGFCFHTAA*MEAEQF
Trigger: AAACTGTTCGGCCTCCATCAATGCAGCAGTGTGAAA...GCAGAAACCAGACCTGGGGTATGGTACAGACCAAAGGACCAGGCCCTTTGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp ACAACCACTGTAGTCCAGCGTCTCCTCCTCAGAAGGTCCGATCTTCCTGATGCATTGGTGACACAGCGGTaGCTTTTGCTGAGACACCAG +
Preference number: 5 (lower is better)
Translates to: TTTVVQRLLLRRSDLPDALVTQR*LLLRHQ
Trigger: CTGGTGTCTCAGCAAAAGCAACCGCTGTGTCACCAA...TGCATCAGGAAGATCGGACCTTCTGAGGAGGAGACGCTGGACTACAGTGGTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CAA 90 bp CGGGCCATACTACCCATGGGCTGTTTGCCCTTCACTGAATGGCTAAGACGGCACCCTCGGAAAGGCATATaGTCAAAGTCTGCACACTGT +
Preference number: 5 (lower is better)
Translates to: RAILPMGCLPFTEWLRRHPRKGI*SKSAHC
Trigger: ACAGTGTGCAGACTTTGACAATATGCCTTTCCGAGG...GTGCCGTCTTAGCCATTCAGTGAAGGGCAAACAGCCCATGGGTAGTATGGCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp CGGGCCATACTACCCATGGGCTGTTTGCCCTTCACTGAATGGCTAAGACGGCACCTGGGCAGTGAATCATaGAAGAACCCTTCAATGGCA +
Preference number: 5 (lower is better)
Translates to: RAILPMGCLPFTEWLRRHLGSES*KNPSMA
Trigger: TGCCATTGAAGGGTTCTTCAATGATTCACTGCCCAG...GTGCCGTCTTAGCCATTCAGTGAAGGGCAAACAGCCCATGGGTAGTATGGCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp GCAGCAAAGGGCCTGGTCCTTTGGTCTGTACCATACCCCAGGTCTGGTTTCTGCCTGGGCAGTGAATCATaGAAGAACCCTTCAATGGCA +
Preference number: 5 (lower is better)
Translates to: AAKGLVLWSVPYPRSGFCLGSES*KNPSMA
Trigger: TGCCATTGAAGGGTTCTTCAATGATTCACTGCCCAG...GCAGAAACCAGACCTGGGGTATGGTACAGACCAAAGGACCAGGCCCTTTGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp GCTCACTACTTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTTGTGAACAGAGCCTCTaGGTATCTGCACCACTTCCA +
Preference number: 5 (lower is better)
Translates to: AHYFWKVCHGGPASTDNACEQSL*VSAPLP
Trigger: TGGAAGTGGTGCAGATACCAAGAGGCTCTGTTCACA...AGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAAGTAGTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp ACAACCACTGTAGTCCAGCGTCTCCTCCTCAGAAGGTCCGATCTTCCTGATGCAGAAAGGTCACTGCTCTaGCACAGAACAATCCGATGC +
Preference number: 5 (lower is better)
Translates to: TTTVVQRLLLRRSDLPDAERSLL*HRTIRC
Trigger: GCATCGGATTGTTCTGTGCAAGAGCAGTGACCTTTC...TGCATCAGGAAGATCGGACCTTCTGAGGAGGAGACGCTGGACTACAGTGGTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CAA 90 bp GCTCACTACTTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTTTTCACACTGCTGCATaGATGGAGGCCGAACAGTTT +
Preference number: 5 (lower is better)
Translates to: AHYFWKVCHGGPASTDNAFHTAA*MEAEQF
Trigger: AAACTGTTCGGCCTCCATCAATGCAGCAGTGTGAAA...AGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAAGTAGTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp CTAAGGCATCCTGTGTGGTGGCAGCAAAGGGCCTGGTCCTTTGGTCTGTACCATGGGGTACTGTCACATTaGCTTTCACACTGCTGCATT +
Preference number: 5 (lower is better)
Translates to: LRHPVWWQQRAWSFGLYHGVLSH*LSHCCI
Trigger: AATGCAGCAGTGTGAAAGCAAATGTGACAGTACCCC...ATGGTACAGACCAAAGGACCAGGCCCTTTGCTGCCACCACACAGGATGCCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp TTCTGTGCGTGGCTCCCTCTAGAAAGGCACTCTGATGCTGCCCCGGGGGATGCCTACTCCGTCTTCTCCTaGAGTGTTTATCATTTTTCA +
Preference number: 5 (lower is better)
Translates to: FCAWLPLERHSDAAPGDAYSVFS*SVYHFS
Trigger: TGAAAAATGATAAACACTCAAGGAGAAGACGGAGTA...GGCATCCCCCGGGGCAGCATCAGAGTGCCTTTCTAGAGGGAGCCACGCACAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp AGGCAAGTACCACGGCCTGAACTGCAAAGCCGTCGCCGGAAAACATCAGAAGCTAAGCTATCGAGGGACTaGTCTGCATGGTGGTTTATC +
Preference number: 5 (lower is better)
Translates to: RQVPRPELQSRRRKTSEAKLSRD*SAWWFI
Trigger: GATAAACCACCATGCAGACAAGTCCCTCGATAGCTT...AGCTTCTGATGTTTTCCGGCGACGGCTTTGCAGTTCAGGCCGTGGTACTTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CAA 90 bp CCCTGTGTTGTTTGGATCTCTCCAATCTGGCATTCCCTCCTAATACCGTGTCCAGACCACCTCCTGTCTTaGGACACCTCCAGCACAAGT +
Preference number: 5 (lower is better)
Translates to: PCVVWISPIWHSLLIPCPDHLLS*DTSSTS
Trigger: ACTTGTGCTGGAGGTGTCCAAAGACAGGAGGTGGTC...TGGACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAACAACACAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS CCA 90 bp CATACACCTGACCTGGGGCCACAGCTGGATAAAGAAAGTCACGCTTaGGAGGCTCATTATCAAGGCAAGTACCACGGCCTGAATCTAGAA +
Preference number: 5 (lower is better)
Translates to: HTPDLGPQLDKESHA*EAHYQGKYHGLNLE
Trigger: TTCTAGATTCAGGCCGTGGTACTTGCCTTGATAATGAGCCTCCCAAGCGTGACTTTCTTTATCCAGCTGTGGCCCCAGGTCAGGTGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381055.8
ENST00000464680.6
CDS-3UTR CAA 90 bp ATCCGGGCCCTGGTGATTCCTCTTGTATCATCAATAGCTCTCTCTGGAAGGCTCATGCGGACAGGAGGTTaGCTTTCCTCTGGACATTGT +
Preference number: 5 (lower is better)
Translates to: IRALVIPLVSSIALSGRLMRTGG*LSSGHC
Trigger: ACAATGTCCAGAGGAAAGCAAACCTCCTGTCCGCAT...GAGCCTTCCAGAGAGAGCTATTGATGATACAAGAGGAATCACCAGGGCCCGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp TCTCCCTGTGTTGTTTGGATCTCTCCAATCTGGCATTCCCTCCTAATACCGTGTGCTCGACTGCAGAACTaGAACTTCAGCACCAGTGGG +
Preference number: 5 (lower is better)
Translates to: SPCVVWISPIWHSLLIPCARLQN*NFSTSG
Trigger: CCCACTGGTGCTGAAGTTCAAGTTCTGCAGTCGAGC...ACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAACAACACAGGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp GCTCACTACTTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTCACAGGGTAATGCATTaGCAAGGACATCAATCCTCT +
Preference number: 5 (lower is better)
Translates to: AHYFWKVCHGGPASTDNAHRVMH*QGHQSS
Trigger: AGAGGATTGATGTCCTTGCAAATGCATTACCCTGTG...AGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAAGTAGTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp TGTGCTTCCGTCCCCTCCACAGACTCGACATCTATCTTCCCTAGCATCAGATCCGCAAGTCTCCCTGTGTaGTTTGGATCTCTCCAATCT +
Preference number: 5 (lower is better)
Translates to: CASVPSTDSTSIFPSIRSASLPV*FGSLQS
Trigger: AGATTGGAGAGATCCAAACAACACAGGGAGACTTGC...GGATCTGATGCTAGGGAAGATAGATGTCGAGTCTGTGGAGGGGACGGAAGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CAA 90 bp TTTAGTAGGACTTTATCCCAGTGGCAGATACTGCTCCCAGGTGTAGGGTACCAGACACAGCGGTTGCTTTaGCTGAGACACCAGAGCTCT +
Preference number: 5 (lower is better)
Translates to: FSRTLSQWQILLPGVGYQTQRLL*LRHQSS
Trigger: AGAGCTCTGGTGTCTCAGCAAAAGCAACCGCTGTGT...CTGGTACCCTACACCTGGGAGCAGTATCTGCCACTGGGATAAAGTCCTACTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp TTTAGTAGGACTTTATCCCAGTGGCAGATACTGCTCCCAGGTGTAGGGTACCAGTTGGTGACACAGCGGTaGCTTTTGCTGAGACACCAG +
Preference number: 5 (lower is better)
Translates to: FSRTLSQWQILLPGVGYQLVTQR*LLLRHQ
Trigger: CTGGTGTCTCAGCAAAAGCAACCGCTGTGTCACCAA...CTGGTACCCTACACCTGGGAGCAGTATCTGCCACTGGGATAAAGTCCTACTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp CTCCTGAAGGTTTTAGCTACTTACGCTGGACTGTCACAGTGTCTTAGGGATGAGTCCAGTGAATCCGCATaGCACTGGGTCCCATCGATC +
Preference number: 5 (lower is better)
Translates to: LLKVLATYAGLSQCLRDESSESA*HWVPSI
Trigger: GATCGATGGGACCCAGTGCAATGCGGATTCACTGGA...CTCATCCCTAAGACACTGTGACAGTCCAGCGTAAGTAGCTAAAACCTTCAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CAA 90 bp GCAGCAAAGGGCCTGGTCCTTTGGTCTGTACCATACCCCAGGTCTGGTTTCTGCATTCCAGAATTTGACTaGCCCAAGAAACTGGGTTTC +
Preference number: 5 (lower is better)
Translates to: AAKGLVLWSVPYPRSGFCIPEFD*PKKLGF
Trigger: GAAACCCAGTTTCTTGGGCAAGTCAAATTCTGGAAT...GCAGAAACCAGACCTGGGGTATGGTACAGACCAAAGGACCAGGCCCTTTGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp GCATTATCGTGGTGGGCAATCCCATTTTCTGGAATGGTGTTTCCATCACTTTGGTGGCTAAGACGGCACTaGGGCTGGTCTTCTAAGGGC +
Preference number: 5 (lower is better)
Translates to: ALSWWAIPFSGMVFPSLWWLRRH*GWSSKG
Trigger: GCCCTTAGAAGACCAGCCCAAGTGCCGTCTTAGCCA...CCAAAGTGATGGAAACACCATTCCAGAAAATGGGATTGCCCACCACGATAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CAA 90 bp CAGTTTCCCTGGGGTTCCCTAAGTAGTCTATGTAGCTCACTACTTTTGGAAGGTTGGCTAAGACGGCACTaGGGCTGGTCTTCTAAGGGC +
Preference number: 5 (lower is better)
Translates to: QFPWGSLSSLCSSLLLEGWLRRH*GWSSKG
Trigger: GCCCTTAGAAGACCAGCCCAAGTGCCGTCTTAGCCA...ACCTTCCAAAAGTAGTGAGCTACATAGACTACTTAGGGAACCCCAGGGAAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp CTCCTGAAGGTTTTAGCTACTTACGCTGGACTGTCACAGTGTCTTAGGGATGAGGGTGGACATGACTGGTaGTTGCAGGGCTCTTTTTCG +
Preference number: 5 (lower is better)
Translates to: LLKVLATYAGLSQCLRDEGGHDW*LQGSFS
Trigger: CGAAAAAGAGCCCTGCAACAACCAGTCATGTCCACC...CTCATCCCTAAGACACTGTGACAGTCCAGCGTAAGTAGCTAAAACCTTCAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CAA 90 bp TTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTATTGTTATTGGTGGACATGACTGGTaGTTGCAGGGCTCTTTTTCG +
Preference number: 5 (lower is better)
Translates to: FWKVCHGGPASTDNAIVIGGHDW*LQGSFS
Trigger: CGAAAAAGAGCCCTGCAACAACCAGTCATGTCCACC...AATAACAATAGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp CCATTGATGCAGATATCCAGTGAATCCGCATTGCACTGGGTCCCATCGATCACCATCCTGGACCACATTTaGGAGTACACTCAGACCAGT +
Preference number: 5 (lower is better)
Translates to: PLMQISSESALHWVPSITILDHI*EYTQTS
Trigger: ACTGGTCTGAGTGTACTCCAAAATGTGGTCCAGGAT...GGTGATCGATGGGACCCAGTGCAATGCGGATTCACTGGATATCTGCATCAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CAA 90 bp GGCCACAGCTGGATAAAGAAAGTCACGCTTGGGAGGCTCATTATCAAGGCAAGTATGCGGACAGGAGGTTaGCTTTCCTCTGGACATTGT +
Preference number: 5 (lower is better)
Translates to: GHSWIKKVTLGRLIIKASMRTGG*LSSGHC
Trigger: ACAATGTCCAGAGGAAAGCAAACCTCCTGTCCGCAT...ACTTGCCTTGATAATGAGCCTCCCAAGCGTGACTTTCTTTATCCAGCTGTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CAA 90 bp CTAAGGCATCCTGTGTGGTGGCAGCAAAGGGCCTGGTCCTTTGGTCTGTACCATATACTGGAAACGACATaGCTCATCAGCATCATACAC +
Preference number: 5 (lower is better)
Translates to: LRHPVWWQQRAWSFGLYHILETT*LISIIH
Trigger: GTGTATGATGCTGATGAGCAATGTCGTTTCCAGTAT...ATGGTACAGACCAAAGGACCAGGCCCTTTGCTGCCACCACACAGGATGCCTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp ACAAACTGCAAAAGGGTCTGCCTGGTTACCGAGCCAGTCTATCTTTTGCATGGTGCTGCTGGAATACTGTaGGTGACACAGCGGTTGCTT +
Preference number: 5 (lower is better)
Translates to: TNCKRVCLVTEPVYLLHGAAGIL*VTQRLL
Trigger: AAGCAACCGCTGTGTCACCAACAGTATTCCAGCAGC...ACCATGCAAAAGATAGACTGGCTCGGTAACCAGGCAGACCCTTTTGCAGTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp CCATTGATGCAGATATCCAGTGAATCCGCATTGCACTGGGTCCCATCGATCACCCCTCGGAAAGGCATATaGTCAAAGTCTGCACACTGT +
Preference number: 5 (lower is better)
Translates to: PLMQISSESALHWVPSITPRKGI*SKSAHC
Trigger: ACAGTGTGCAGACTTTGACAATATGCCTTTCCGAGG...GGTGATCGATGGGACCCAGTGCAATGCGGATTCACTGGATATCTGCATCAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CAA 90 bp CGGGCCATACTACCCATGGGCTGTTTGCCCTTCACTGAATGGCTAAGACGGCACCAAGTTAACTGTTCTTaGAAAAGGCGCAAGGGAATT +
Preference number: 5 (lower is better)
Translates to: RAILPMGCLPFTEWLRRHQVNCS*KRRKGI
Trigger: AATTCCCTTGCGCCTTTTCAAAGAACAGTTAACTTG...GTGCCGTCTTAGCCATTCAGTGAAGGGCAAACAGCCCATGGGTAGTATGGCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp TCTCCCTGTGTTGTTTGGATCTCTCCAATCTGGCATTCCCTCCTAATACCGTGTGGACATGACTGGTTGTaGCAGGGCTCTTTTTCGACA +
Preference number: 5 (lower is better)
Translates to: SPCVVWISPIWHSLLIPCGHDWL*QGSFST
Trigger: TGTCGAAAAAGAGCCCTGCAACAACCAGTCATGTCC...ACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAACAACACAGGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp CCCTGTGTTGTTTGGATCTCTCCAATCTGGCATTCCCTCCTAATACCGTGTCCAATCCTGGACCACATTTaGGAGTACACTCAGACCAGT +
Preference number: 5 (lower is better)
Translates to: PCVVWISPIWHSLLIPCPILDHI*EYTQTS
Trigger: ACTGGTCTGAGTGTACTCCAAAATGTGGTCCAGGAT...TGGACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAACAACACAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp TGTCCTTGGCAGGTCTTACAACACATCTGTCTGAAGTATGCTCGACTGCAGAACGCTTTCCTCTGGACATaGTGCAGCTGGGAATGTCTT +
Preference number: 5 (lower is better)
Translates to: CPWQVLQHICLKYARLQNAFLWT*CSWECL
Trigger: AAGACATTCCCAGCTGCACAATGTCCAGAGGAAAGC...GTTCTGCAGTCGAGCATACTTCAGACAGATGTGTTGTAAGACCTGCCAAGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CAA 90 bp ACTTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTATTGTTAGCAAGTCTCCCTGTGTaGTTTGGATCTCTCCAATCT +
Preference number: 5 (lower is better)
Translates to: TFGRSAMVAQPPLTMLLLASLPV*FGSLQS
Trigger: AGATTGGAGAGATCCAAACAACACAGGGAGACTTGC...TAACAATAGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp GCATTATCGTGGTGGGCAATCCCATTTTCTGGAATGGTGTTTCCATCACTTTGGTACATTGGCGGGAGGTaGCTCCATACTGGAAACGAC +
Preference number: 5 (lower is better)
Translates to: ALSWWAIPFSGMVFPSLWYIGGR*LHTGND
Trigger: GTCGTTTCCAGTATGGAGCAACCTCCCGCCAATGTA...CCAAAGTGATGGAAACACCATTCCAGAAAATGGGATTGCCCACCACGATAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CAA 90 bp GATTTACTCGAAAGAACACAAACGCTCCACAGTAAGCAAGTCTCCCTGTGTTGTTCCAGTGAATCCGCATaGCACTGGGTCCCATCGATC +
Preference number: 5 (lower is better)
Translates to: DLLERTQTLHSKQVSLCCSSESA*HWVPSI
Trigger: GATCGATGGGACCCAGTGCAATGCGGATTCACTGGA...ACAACACAGGGAGACTTGCTTACTGTGGAGCGTTTGTGTTCTTTCGAGTAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp ACAAACTGCAAAAGGGTCTGCCTGGTTACCGAGCCAGTCTATCTTTTGCATGGTTCACAGCCTACGTGCTaGCATTCTCCATTGATGCAG +
Preference number: 5 (lower is better)
Translates to: TNCKRVCLVTEPVYLLHGSQPTC*HSPLMQ
Trigger: CTGCATCAATGGAGAATGCAAGCACGTAGGCTGTGA...ACCATGCAAAAGATAGACTGGCTCGGTAACCAGGCAGACCCTTTTGCAGTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp TCTCCCTGTGTTGTTTGGATCTCTCCAATCTGGCATTCCCTCCTAATACCGTGTTGTGAACAGAGCCTCTaGGTATCTGCACCACTTCCA +
Preference number: 5 (lower is better)
Translates to: SPCVVWISPIWHSLLIPCCEQSL*VSAPLP
Trigger: TGGAAGTGGTGCAGATACCAAGAGGCTCTGTTCACA...ACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAACAACACAGGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp GTGGCAGCAAAGGGCCTGGTCCTTTGGTCTGTACCATACCCCAGGTCTGGTTTCATTCTGGTTCATCAGTaGGTCTCTTGTAATGAAAAG +
Preference number: 5 (lower is better)
Translates to: VAAKGLVLWSVPYPRSGFILVHQ*VSCNEK
Trigger: CTTTTCATTACAAGAGACCAACTGATGAACCAGAAT...GAAACCAGACCTGGGGTATGGTACAGACCAAAGGACCAGGCCCTTTGCTGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp GCTCACTACTTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTGAGGTAAACAGGCTATaGGATTTACTCGAAAGAACA +
Preference number: 5 (lower is better)
Translates to: AHYFWKVCHGGPASTDNAEVNRL*DLLERT
Trigger: TGTTCTTTCGAGTAAATCCAATAGCCTGTTTACCTC...AGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAAGTAGTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp GCATTATCGTGGTGGGCAATCCCATTTTCTGGAATGGTGTTTCCATCACTTTGGCTGGAAGGCTCAGGGTaGAGAACTGTGGTGTTGAGA +
Preference number: 5 (lower is better)
Translates to: ALSWWAIPFSGMVFPSLWLEGSG*RTVVLR
Trigger: TCTCAACACCACAGTTCTCAACCCTGAGCCTTCCAG...CCAAAGTGATGGAAACACCATTCCAGAAAATGGGATTGCCCACCACGATAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CAA 90 bp CGGGCCATACTACCCATGGGCTGTTTGCCCTTCACTGAATGGCTAAGACGGCACGAGCTGATATTTATGTaGGAGAAAATCAGATCTGGA +
Preference number: 5 (lower is better)
Translates to: RAILPMGCLPFTEWLRRHELIFM*EKIRSG
Trigger: TCCAGATCTGATTTTCTCCAACATAAATATCAGCTC...GTGCCGTCTTAGCCATTCAGTGAAGGGCAAACAGCCCATGGGTAGTATGGCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp TCTCCCTGTGTTGTTTGGATCTCTCCAATCTGGCATTCCCTCCTAATACCGTGTCAGCAGGAGAAAATTTaGGCAGCTTTTCCTCGGAGG +
Preference number: 5 (lower is better)
Translates to: SPCVVWISPIWHSLLIPCQQEKI*AAFPRR
Trigger: CCTCCGAGGAAAAGCTGCCAAAATTTTCTCCTGCTG...ACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAACAACACAGGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381055.8
CDS-3UTR CAA 90 bp GTTTGGATCTCTCCAATCTGGCATTCCCTCCTAATACCGTGTCCAGCACTTTGGTTCCCCATATTTACATaGGCGGGAGGTTGCTCCATA +
Preference number: 5 (lower is better)
Translates to: VWISPIWHSLLIPCPALWFPIFT*AGGCSI
Trigger: TATGGAGCAACCTCCCGCCAATGTAAATATGGGGAA...CCAAAGTGCTGGACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381055.8
CDS-3UTR CAA 90 bp CCATTGATGCAGATATCCAGTGAATCCGCATTGCACTGGGTCCCATCGATCACCTTCTGGACAATGGAGTaGTCATCCAACCTTTTACAG +
Preference number: 5 (lower is better)
Translates to: PLMQISSESALHWVPSITFWTME*SSNLLQ
Trigger: CTGTAAAAGGTTGGATGACAACTCCATTGTCCAGAA...GGTGATCGATGGGACCCAGTGCAATGCGGATTCACTGGATATCTGCATCAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CAA 90 bp CAGTTTCCCTGGGGTTCCCTAAGTAGTCTATGTAGCTCACTACTTTTGGAAGGTGGACATGACTGGTTGTaGCAGGGCTCTTTTTCGACA +
Preference number: 5 (lower is better)
Translates to: QFPWGSLSSLCSSLLLEGGHDWL*QGSFST
Trigger: TGTCGAAAAAGAGCCCTGCAACAACCAGTCATGTCC...ACCTTCCAAAAGTAGTGAGCTACATAGACTACTTAGGGAACCCCAGGGAAACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp CAGTTTCCCTGGGGTTCCCTAAGTAGTCTATGTAGCTCACTACTTTTGGAAGGTGCTTTCCTCTGGACATaGTGCAGCTGGGAATGTCTT +
Preference number: 5 (lower is better)
Translates to: QFPWGSLSSLCSSLLLEGAFLWT*CSWECL
Trigger: AAGACATTCCCAGCTGCACAATGTCCAGAGGAAAGC...ACCTTCCAAAAGTAGTGAGCTACATAGACTACTTAGGGAACCCCAGGGAAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp TGTCCTTGGCAGGTCTTACAACACATCTGTCTGAAGTATGCTCGACTGCAGAACGGGGTACTGTCACATTaGCTTTCACACTGCTGCATT +
Preference number: 5 (lower is better)
Translates to: CPWQVLQHICLKYARLQNGVLSH*LSHCCI
Trigger: AATGCAGCAGTGTGAAAGCAAATGTGACAGTACCCC...GTTCTGCAGTCGAGCATACTTCAGACAGATGTGTTGTAAGACCTGCCAAGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CAA 90 bp CATTTGCTTTCACACTGCTGCATTGATGGAGGCCGAACAGTTTCTAGACAGTCAGTCTCCCTGTGTTGTTaGGATCTCTCCAATCTGGCA +
Preference number: 5 (lower is better)
Translates to: HLLSHCCIDGGRTVSRQSVSLCC*DLSNLA
Trigger: TGCCAGATTGGAGAGATCCAAACAACACAGGGAGAC...TGACTGTCTAGAAACTGTTCGGCCTCCATCAATGCAGCAGTGTGAAAGCAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CAA 90 bp GGCCACAGCTGGATAAAGAAAGTCACGCTTGGGAGGCTCATTATCAAGGCAAGTGGTGTTTCCATCACTTaGGTGGGAGAGAATGGATTT +
Preference number: 5 (lower is better)
Translates to: GHSWIKKVTLGRLIIKASGVSIT*VGENGF
Trigger: AAATCCATTCTCTCCCACCAAAGTGATGGAAACACC...ACTTGCCTTGATAATGAGCCTCCCAAGCGTGACTTTCTTTATCCAGCTGTGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CAA 90 bp TTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTATTGTTATTACACCCATATTTACATaGGCGGGAGGTTGCTCCATA +
Preference number: 5 (lower is better)
Translates to: FWKVCHGGPASTDNAIVITPIFT*AGGCSI
Trigger: TATGGAGCAACCTCCCGCCAATGTAAATATGGGTGT...AATAACAATAGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CAA 90 bp ACATCTGGAACTCATCGTAATTGTCAACAAACTGCAAAAGGGTCTGCCTGGTTAAAAGGGCCTGGTCCTTaGGTCTGTACCATACCCCAG +
Preference number: 5 (lower is better)
Translates to: TSGTHRNCQQTAKGSAWLKGPGP*VCTIPQ
Trigger: CTGGGGTATGGTACAGACCAAAGGACCAGGCCCTTT...TAACCAGGCAGACCCTTTTGCAGTTTGTTGACAATTACGATGAGTTCCAGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp TTTAGTAGGACTTTATCCCAGTGGCAGATACTGCTCCCAGGTGTAGGGTACCAGCAATGGGGAGGCATTTaGGACACAAAGCACATTCAT +
Preference number: 5 (lower is better)
Translates to: FSRTLSQWQILLPGVGYQQWGGI*DTKHIH
Trigger: ATGAATGTGCTTTGTGTCCAAAATGCCTCCCCATTG...CTGGTACCCTACACCTGGGAGCAGTATCTGCCACTGGGATAAAGTCCTACTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp GGCCACAGCTGGATAAAGAAAGTCACGCTTGGGAGGCTCATTATCAAGGCAAGTCAGCAAACCTGGGAGTaGTTTAGATTGGCTTTTGGT +
Preference number: 5 (lower is better)
Translates to: GHSWIKKVTLGRLIIKASQQTWE*FRLAFG
Trigger: ACCAAAAGCCAATCTAAACAACTCCCAGGTTTGCTG...ACTTGCCTTGATAATGAGCCTCCCAAGCGTGACTTTCTTTATCCAGCTGTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CAA 90 bp CACATTTGCTTTCACACTGCTGCATTGATGGAGGCCGAACAGTTTCTAGACAGTTGTAGCTCACTACTTTaGGAAGGTCTGCCATGGTGG +
Preference number: 5 (lower is better)
Translates to: HICFHTAALMEAEQFLDSCSSLL*EGLPWW
Trigger: CCACCATGGCAGACCTTCCAAAAGTAGTGAGCTACA...ACTGTCTAGAAACTGTTCGGCCTCCATCAATGCAGCAGTGTGAAAGCAAATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CAA 90 bp CCCTGTGTTGTTTGGATCTCTCCAATCTGGCATTCCCTCCTAATACCGTGTCCACCCAGCCAACTTGAATaGCAGCAGGAGAAAATTTTG +
Preference number: 5 (lower is better)
Translates to: PCVVWISPIWHSLLIPCPPSQLE*QQEKIL
Trigger: CAAAATTTTCTCCTGCTGCAATTCAAGTTGGCTGGG...TGGACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAACAACACAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381055.8
CDS-3UTR CAA 90 bp TCTCCCTGTGTTGTTTGGATCTCTCCAATCTGGCATTCCCTCCTAATACCGTGTAGTGTTGCAGGCTCTTaGATTTTCAGGTGGCTTACT +
Preference number: 5 (lower is better)
Translates to: SPCVVWISPIWHSLLIPCSVAGS*IFRWLT
Trigger: AGTAAGCCACCTGAAAATCAAAGAGCCTGCAACACT...ACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAACAACACAGGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp ATTATCTTAATGGTCCAAGGAGGTAAACAGGCTATTGGATTTACTCGAAAGAACTGCAGAGCACTGCCCTaGTGCGCATCCCACCATCAC +
Preference number: 5 (lower is better)
Translates to: IILMVQGGKQAIGFTRKNCRALP*CASHHH
Trigger: GTGATGGTGGGATGCGCACAAGGGCAGTGCTCTGCA...GTTCTTTCGAGTAAATCCAATAGCCTGTTTACCTCCTTGGACCATTAAGATAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp GATTTACTCGAAAGAACACAAACGCTCCACAGTAAGCAAGTCTCCCTGTGTTGTGAAAGGTCACTGCTCTaGCACAGAACAATCCGATGC +
Preference number: 5 (lower is better)
Translates to: DLLERTQTLHSKQVSLCCERSLL*HRTIRC
Trigger: GCATCGGATTGTTCTGTGCAAGAGCAGTGACCTTTC...ACAACACAGGGAGACTTGCTTACTGTGGAGCGTTTGTGTTCTTTCGAGTAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp ATCCGGGCCCTGGTGATTCCTCTTGTATCATCAATAGCTCTCTCTGGAAGGCTCATACAGATGTCGTTGTaGAAGGGCAGACTTTTTGTA +
Preference number: 5 (lower is better)
Translates to: IRALVIPLVSSIALSGRLIQMSL*KGRLFV
Trigger: TACAAAAAGTCTGCCCTTCAACAACGACATCTGTAT...GAGCCTTCCAGAGAGAGCTATTGATGATACAAGAGGAATCACCAGGGCCCGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp TTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTATTGTTATTGGTGTTTCCATCACTTaGGTGGGAGAGAATGGATTT +
Preference number: 5 (lower is better)
Translates to: FWKVCHGGPASTDNAIVIGVSIT*VGENGF
Trigger: AAATCCATTCTCTCCCACCAAAGTGATGGAAACACC...AATAACAATAGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp TTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTATTGTTATTCAATGGGGAGGCATTTaGGACACAAAGCACATTCAT +
Preference number: 5 (lower is better)
Translates to: FWKVCHGGPASTDNAIVIQWGGI*DTKHIH
Trigger: ATGAATGTGCTTTGTGTCCAAAATGCCTCCCCATTG...AATAACAATAGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp TTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTATTGTTATTTGTTTAGATTGGCTTTaGGTGTCTGAGGGTCTGTCT +
Preference number: 5 (lower is better)
Translates to: FWKVCHGGPASTDNAIVICLDWL*VSEGLS
Trigger: AGACAGACCCTCAGACACCAAAAGCCAATCTAAACA...AATAACAATAGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp TCTCCCTGTGTTGTTTGGATCTCTCCAATCTGGCATTCCCTCCTAATACCGTGTAGAACAATCCGATGCTaGAATCCTGGACCACATTTT +
Preference number: 5 (lower is better)
Translates to: SPCVVWISPIWHSLLIPCRTIRC*NPGPHF
Trigger: AAAATGTGGTCCAGGATTCAAGCATCGGATTGTTCT...ACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAACAACACAGGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp GTAATGAAAAGCTGTCCCAGCAACATCAAATTTCCTAGGCCAGTCAATAGTCCATGTGGGTCAGTGTCCTaGGCAGGTCTTACAACACAT +
Preference number: 5 (lower is better)
Translates to: VMKSCPSNIKFPRPVNSPCGSVS*AGLTTH
Trigger: ATGTGTTGTAAGACCTGCCAAGGACACTGACCCACA...TGGACTATTGACTGGCCTAGGAAATTTGATGTTGCTGGGACAGCTTTTCATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CAA 90 bp TTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTATTGTTATTTGCAACCCAACACAGTaGCTTAAAGCCACTTTAGTT +
Preference number: 5 (lower is better)
Translates to: FWKVCHGGPASTDNAIVICNPTQ*LKATLV
Trigger: AACTAAAGTGGCTTTAAGCAACTGTGTTGGGTTGCA...AATAACAATAGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp ACTTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTATTGTTAATCATACAGATGTCGTaGTTGAAGGGCAGACTTTTT +
Preference number: 5 (lower is better)
Translates to: TFGRSAMVAQPPLTMLLLIIQMS*LKGRLF
Trigger: AAAAAGTCTGCCCTTCAACAACGACATCTGTATGAT...TAACAATAGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp ACATCTGGAACTCATCGTAATTGTCAACAAACTGCAAAAGGGTCTGCCTGGTTATCACAGCCTACGTGCTaGCATTCTCCATTGATGCAG +
Preference number: 5 (lower is better)
Translates to: TSGTHRNCQQTAKGSAWLSQPTC*HSPLMQ
Trigger: CTGCATCAATGGAGAATGCAAGCACGTAGGCTGTGA...TAACCAGGCAGACCCTTTTGCAGTTTGTTGACAATTACGATGAGTTCCAGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp TTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTATTGTTATTATTCCAGAATTTGACTaGCCCAAGAAACTGGGTTTC +
Preference number: 5 (lower is better)
Translates to: FWKVCHGGPASTDNAIVIIPEFD*PKKLGF
Trigger: GAAACCCAGTTTCTTGGGCAAGTCAAATTCTGGAAT...AATAACAATAGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp CAGTTTCCCTGGGGTTCCCTAAGTAGTCTATGTAGCTCACTACTTTTGGAAGGTAGAACAATCCGATGCTaGAATCCTGGACCACATTTT +
Preference number: 5 (lower is better)
Translates to: QFPWGSLSSLCSSLLLEGRTIRC*NPGPHF
Trigger: AAAATGTGGTCCAGGATTCAAGCATCGGATTGTTCT...ACCTTCCAAAAGTAGTGAGCTACATAGACTACTTAGGGAACCCCAGGGAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp ACTTTTGGAAGGTCTGCCATGGTGGCCCAGCCTCCACTGACAATGCTATTGTTATACTCCGTCTTCTCCTaGAGTGTTTATCATTTTTCA +
Preference number: 5 (lower is better)
Translates to: TFGRSAMVAQPPLTMLLLYSVFS*SVYHFS
Trigger: TGAAAAATGATAAACACTCAAGGAGAAGACGGAGTA...TAACAATAGCATTGTCAGTGGAGGCTGGGCCACCATGGCAGACCTTCCAAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp CAGTTTCCCTGGGGTTCCCTAAGTAGTCTATGTAGCTCACTACTTTTGGAAGGTTGCTTGCATTCTCCATaGATGCAGATATCCAGTGAA +
Preference number: 5 (lower is better)
Translates to: QFPWGSLSSLCSSLLLEGCLHSP*MQISSE
Trigger: TTCACTGGATATCTGCATCAATGGAGAATGCAAGCA...ACCTTCCAAAAGTAGTGAGCTACATAGACTACTTAGGGAACCCCAGGGAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp GCATTATCGTGGTGGGCAATCCCATTTTCTGGAATGGTGTTTCCATCACTTTGGTCCCAAATTCTGTTCTaGAAGCAGAACCATGACGAT +
Preference number: 5 (lower is better)
Translates to: ALSWWAIPFSGMVFPSLWSQILF*KQNHDD
Trigger: ATCGTCATGGTTCTGCTTCAAGAACAGAATTTGGGA...CCAAAGTGATGGAAACACCATTCCAGAAAATGGGATTGCCCACCACGATAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CAA 90 bp ATTATCTTAATGGTCCAAGGAGGTAAACAGGCTATTGGATTTACTCGAAAGAACGACCACCTCCTGTCTTaGGACACCTCCAGCACAAGT +
Preference number: 5 (lower is better)
Translates to: IILMVQGGKQAIGFTRKNDHLLS*DTSSTS
Trigger: ACTTGTGCTGGAGGTGTCCAAAGACAGGAGGTGGTC...GTTCTTTCGAGTAAATCCAATAGCCTGTTTACCTCCTTGGACCATTAAGATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp GATTTACTCGAAAGAACACAAACGCTCCACAGTAAGCAAGTCTCCCTGTGTTGTAAATCTCAGCTTTACTaGCACAATGGCAAGTTGGCC +
Preference number: 5 (lower is better)
Translates to: DLLERTQTLHSKQVSLCCKSQLY*HNGKLA
Trigger: GGCCAACTTGCCATTGTGCAAGTAAAGCTGAGATTT...ACAACACAGGGAGACTTGCTTACTGTGGAGCGTTTGTGTTCTTTCGAGTAAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp TCTCCCTGTGTTGTTTGGATCTCTCCAATCTGGCATTCCCTCCTAATACCGTGTCAAGTTAACTGTTCTTaGAAAAGGCGCAAGGGAATT +
Preference number: 5 (lower is better)
Translates to: SPCVVWISPIWHSLLIPCQVNCS*KRRKGI
Trigger: AATTCCCTTGCGCCTTTTCAAAGAACAGTTAACTTG...ACACGGTATTAGGAGGGAATGCCAGATTGGAGAGATCCAAACAACACAGGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp ATTATCTTAATGGTCCAAGGAGGTAAACAGGCTATTGGATTTACTCGAAAGAACCGGCCCCCAGCCAACTaGAATTGCAGCAGGAGAAAA +
Preference number: 5 (lower is better)
Translates to: IILMVQGGKQAIGFTRKNRPPAN*NCSRRK
Trigger: TTTTCTCCTGCTGCAATTCAAGTTGGCTGGGGGCCG...GTTCTTTCGAGTAAATCCAATAGCCTGTTTACCTCCTTGGACCATTAAGATAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381055.8
CDS CCA 90 bp CCTAGTAATAAGAACTGCATTATCGTGGTGGGCAATCCCATTTTCTaGAATGGTGTTTCCATCACTTTGGTGGGAGAGAATGGATTTCTG +
Preference number: 5 (lower is better)
Translates to: PSNKNCIIVVGNPIF*NGVSITLVGENGFL
Trigger: CAGAAATCCATTCTCTCCCACCAAAGTGATGGAAACACCATTCCAGAAAATGGGATTGCCCACCACGATAATGCAGTTCTTATTACTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502886.1
CDS-3UTR CAA 90 bp TTACTTGAAACTGTTTCATCCTGTTACATTCTGTGCGTGGCTCCCTCTAGAAAGAGTGTTGCAGGCTCTTaGATTTTCAGGTGGCTTACT +
Preference number: 5 (lower is better)
Translates to: LLETVSSCYILCVAPSRKSVAGS*IFRWLT
Trigger: AGTAAGCCACCTGAAAATCAAAGAGCCTGCAACACT...CTTTCTAGAGGGAGCCACGCACAGAATGTAACAGGATGAAACAGTTTCAAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp ATTATCTTAATGGTCCAAGGAGGTAAACAGGCTATTGGATTTACTCGAAAGAACACACAGCGGTTGCTTTaGCTGAGACACCAGAGCTCT +
Preference number: 5 (lower is better)
Translates to: IILMVQGGKQAIGFTRKNTQRLL*LRHQSS
Trigger: AGAGCTCTGGTGTCTCAGCAAAAGCAACCGCTGTGT...GTTCTTTCGAGTAAATCCAATAGCCTGTTTACCTCCTTGGACCATTAAGATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp TTACTTGAAACTGTTTCATCCTGTTACATTCTGTGCGTGGCTCCCTCTAGAAAGCAGCAAACCTGGGAGTaGTTTAGATTGGCTTTTGGT +
Preference number: 5 (lower is better)
Translates to: LLETVSSCYILCVAPSRKQQTWE*FRLAFG
Trigger: ACCAAAAGCCAATCTAAACAACTCCCAGGTTTGCTG...CTTTCTAGAGGGAGCCACGCACAGAATGTAACAGGATGAAACAGTTTCAAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp TTGGAAATCATATGTATCTCACGGGGTTTAATCATTAGGGTACATTTACCGTTCCTACCCATGGGCTGTTaGCCCTTCACTGAATGGCTA +
Preference number: 5 (lower is better)
Translates to: LEIICISRGLIIRVHLPFLPMGC*PFTEWL
Trigger: TAGCCATTCAGTGAAGGGCAAACAGCCCATGGGTAG...GAACGGTAAATGTACCCTAATGATTAAACCCCGTGAGATACATATGATTTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS CCA 90 bp ACTTGCAACAAACCATACCTAGTAATAAGAACTGCATTATCGTGGTaGGCAATCCCATTTTCTGGAATGGTGTTTCCATCACTTTGGTGG +
Preference number: 5 (lower is better)
Translates to: TCNKPYLVIRTALSW*AIPFSGMVFPSLWW
Trigger: CCACCAAAGTGATGGAAACACCATTCCAGAAAATGGGATTGCCCACCACGATAATGCAGTTCTTATTACTAGGTATGGTTTGTTGCAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502886.1
CDS-3UTR CAA 90 bp ATTATCTTAATGGTCCAAGGAGGTAAACAGGCTATTGGATTTACTCGAAAGAACGTCTCCCTGTGTTGTTaGGATCTCTCCAATCTGGCA +
Preference number: 5 (lower is better)
Translates to: IILMVQGGKQAIGFTRKNVSLCC*DLSNLA
Trigger: TGCCAGATTGGAGAGATCCAAACAACACAGGGAGAC...GTTCTTTCGAGTAAATCCAATAGCCTGTTTACCTCCTTGGACCATTAAGATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp AAGGAGGTAAACAGGCTATTGGATTTACTCGAAAGAACACAAACGCTCCACAGTTGCAACCCAACACAGTaGCTTAAAGCCACTTTAGTT +
Preference number: 5 (lower is better)
Translates to: KEVNRLLDLLERTQTLHSCNPTQ*LKATLV
Trigger: AACTAAAGTGGCTTTAAGCAACTGTGTTGGGTTGCA...ACTGTGGAGCGTTTGTGTTCTTTCGAGTAAATCCAATAGCCTGTTTACCTCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp ACATCTGGAACTCATCGTAATTGTCAACAAACTGCAAAAGGGTCTGCCTGGTTAATACTGGAAACGACATaGCTCATCAGCATCATACAC +
Preference number: 5 (lower is better)
Translates to: TSGTHRNCQQTAKGSAWLILETT*LISIIH
Trigger: GTGTATGATGCTGATGAGCAATGTCGTTTCCAGTAT...TAACCAGGCAGACCCTTTTGCAGTTTGTTGACAATTACGATGAGTTCCAGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp ACATCTGGAACTCATCGTAATTGTCAACAAACTGCAAAAGGGTCTGCCTGGTTATGCTTGCATTCTCCATaGATGCAGATATCCAGTGAA +
Preference number: 5 (lower is better)
Translates to: TSGTHRNCQQTAKGSAWLCLHSP*MQISSE
Trigger: TTCACTGGATATCTGCATCAATGGAGAATGCAAGCA...TAACCAGGCAGACCCTTTTGCAGTTTGTTGACAATTACGATGAGTTCCAGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp TTACTTGAAACTGTTTCATCCTGTTACATTCTGTGCGTGGCTCCCTCTAGAAAGTCCCAAATTCTGTTCTaGAAGCAGAACCATGACGAT +
Preference number: 5 (lower is better)
Translates to: LLETVSSCYILCVAPSRKSQILF*KQNHDD
Trigger: ATCGTCATGGTTCTGCTTCAAGAACAGAATTTGGGA...CTTTCTAGAGGGAGCCACGCACAGAATGTAACAGGATGAAACAGTTTCAAGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp GATTTACTCGAAAGAACACAAACGCTCCACAGTAAGCAAGTCTCCCTGTGTTGTGAGGTAAACAGGCTATaGGATTTACTCGAAAGAACA +
Preference number: 5 (lower is better)
Translates to: DLLERTQTLHSKQVSLCCEVNRL*DLLERT
Trigger: TGTTCTTTCGAGTAAATCCAATAGCCTGTTTACCTC...ACAACACAGGGAGACTTGCTTACTGTGGAGCGTTTGTGTTCTTTCGAGTAAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp ATTATCTTAATGGTCCAAGGAGGTAAACAGGCTATTGGATTTACTCGAAAGAACTGTAGCTCACTACTTTaGGAAGGTCTGCCATGGTGG +
Preference number: 5 (lower is better)
Translates to: IILMVQGGKQAIGFTRKNCSSLL*EGLPWW
Trigger: CCACCATGGCAGACCTTCCAAAAGTAGTGAGCTACA...GTTCTTTCGAGTAAATCCAATAGCCTGTTTACCTCCTTGGACCATTAAGATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp GATTTACTCGAAAGAACACAAACGCTCCACAGTAAGCAAGTCTCCCTGTGTTGTTGTACTACGTTGATCTaGCAAATATCCTGTGTAATG +
Preference number: 5 (lower is better)
Translates to: DLLERTQTLHSKQVSLCCCTTLI*QISCVM
Trigger: CATTACACAGGATATTTGCAAGATCAACGTAGTACA...ACAACACAGGGAGACTTGCTTACTGTGGAGCGTTTGTGTTCTTTCGAGTAAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp ACATCTGGAACTCATCGTAATTGTCAACAAACTGCAAAAGGGTCTGCCTGGTTAATCATACAGATGTCGTaGTTGAAGGGCAGACTTTTT +
Preference number: 5 (lower is better)
Translates to: TSGTHRNCQQTAKGSAWLIIQMS*LKGRLF
Trigger: AAAAAGTCTGCCCTTCAACAACGACATCTGTATGAT...TAACCAGGCAGACCCTTTTGCAGTTTGTTGACAATTACGATGAGTTCCAGATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS CCA 90 bp AATACTTGCAACAAACCATACCTAGTAATAAGAACTGCATTATCGTaGTGGGCAATCCCATTTTCTGGAATGGTGTTTCCATCACTTTGG +
Preference number: 5 (lower is better)
Translates to: NTCNKPYLVIRTALS*WAIPFSGMVFPSLW
Trigger: CCAAAGTGATGGAAACACCATTCCAGAAAATGGGATTGCCCACCACGATAATGCAGTTCTTATTACTAGGTATGGTTTGTTGCAAGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502886.1
CDS-3UTR CAA 90 bp TTGGAAATCATATGTATCTCACGGGGTTTAATCATTAGGGTACATTTACCGTTCCACAGGGTAATGCATTaGCAAGGACATCAATCCTCT +
Preference number: 5 (lower is better)
Translates to: LEIICISRGLIIRVHLPFHRVMH*QGHQSS
Trigger: AGAGGATTGATGTCCTTGCAAATGCATTACCCTGTG...GAACGGTAAATGTACCCTAATGATTAAACCCCGTGAGATACATATGATTTCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp TTACTTGAAACTGTTTCATCCTGTTACATTCTGTGCGTGGCTCCCTCTAGAAAGATTCTGGTTCATCAGTaGGTCTCTTGTAATGAAAAG +
Preference number: 5 (lower is better)
Translates to: LLETVSSCYILCVAPSRKILVHQ*VSCNEK
Trigger: CTTTTCATTACAAGAGACCAACTGATGAACCAGAAT...CTTTCTAGAGGGAGCCACGCACAGAATGTAACAGGATGAAACAGTTTCAAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp TTGGAAATCATATGTATCTCACGGGGTTTAATCATTAGGGTACATTTACCGTTCAAATCTCAGCTTTACTaGCACAATGGCAAGTTGGCC +
Preference number: 5 (lower is better)
Translates to: LEIICISRGLIIRVHLPFKSQLY*HNGKLA
Trigger: GGCCAACTTGCCATTGTGCAAGTAAAGCTGAGATTT...GAACGGTAAATGTACCCTAATGATTAAACCCCGTGAGATACATATGATTTCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS GCA 90 bp TCAATGGAAAAATACTTGCAACAAACCATACCTAGTAATAAGAACTaGATTATCGTGGTGGGCAATCCCATTTTCTGGAATGGTGTTTCC +
Preference number: 5 (lower is better)
Translates to: SMEKYLQQTIPSNKN*IIVVGNPIFWNGVS
Trigger: GGAAACACCATTCCAGAAAATGGGATTGCCCACCACGATAATGCAGTTCTTATTACTAGGTATGGTTTGTTGCAAGTATTTTTCCATTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502886.1
CDS-3UTR CAA 90 bp ATTATCTTAATGGTCCAAGGAGGTAAACAGGCTATTGGATTTACTCGAAAGAACTTCTGGACAATGGAGTaGTCATCCAACCTTTTACAG +
Preference number: 5 (lower is better)
Translates to: IILMVQGGKQAIGFTRKNFWTME*SSNLLQ
Trigger: CTGTAAAAGGTTGGATGACAACTCCATTGTCCAGAA...GTTCTTTCGAGTAAATCCAATAGCCTGTTTACCTCCTTGGACCATTAAGATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp AGTGCAGATATCATATCTAGTAATAAGAACTGCATTATCGTGGTGGGCAATCCCGAGCTGATATTTATGTaGGAGAAAATCAGATCTGGA +
Preference number: 5 (lower is better)
Translates to: SADIISSNKNCIIVVGNPELIFM*EKIRSG
Trigger: TCCAGATCTGATTTTCTCCAACATAAATATCAGCTC...GGGATTGCCCACCACGATAATGCAGTTCTTATTACTAGATATGATATCTGCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381052.8
CDS-3UTR CAA 90 bp TTGGAAATCATATGTATCTCACGGGGTTTAATCATTAGGGTACATTTACCGTTCATACAGATGTCGTTGTaGAAGGGCAGACTTTTTGTA +
Preference number: 5 (lower is better)
Translates to: LEIICISRGLIIRVHLPFIQMSL*KGRLFV
Trigger: TACAAAAAGTCTGCCCTTCAACAACGACATCTGTAT...GAACGGTAAATGTACCCTAATGATTAAACCCCGTGAGATACATATGATTTCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS-3UTR CAA 90 bp ATTATCTTAATGGTCCAAGGAGGTAAACAGGCTATTGGATTTACTCGAAAGAACTGTACTACGTTGATCTaGCAAATATCCTGTGTAATG +
Preference number: 5 (lower is better)
Translates to: IILMVQGGKQAIGFTRKNCTTLI*QISCVM
Trigger: CATTACACAGGATATTTGCAAGATCAACGTAGTACA...GTTCTTTCGAGTAAATCCAATAGCCTGTTTACCTCCTTGGACCATTAAGATAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381052.8
ENST00000381055.8
CDS TCA 72 bp GGACACCAGTCCATGCAGCAGCAAGGGTGTTGGCTTTaGAGGAAGCCAACTGTCCTGCTCTCCCAGCCAGAG +
Preference number: 6 (lower is better)
Translates to: GHQSMQQQGCWL*RKPTVLLSQPE
Trigger: CTCTGGCTGGGAGAGCAGGACAGTTGGCTTCCTTCAAAGCCAACACCCTTGCTGCTGCATGGACTGGTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417396.2
CDS CAA 90 bp ACCACCTCCTGTCTTTGGACACCAGTCCATGCAGCAGCAAGGGTGTaGGCTTTGAAGGAAGCCAACTGTCCTGCTCTCCCAGCCAGAGGT +
Preference number: 6 (lower is better)
Translates to: TTSCLWTPVHAAARV*ALKEANCPALPARG
Trigger: ACCTCTGGCTGGGAGAGCAGGACAGTTGGCTTCCTTCAAAGCCAACACCCTTGCTGCTGCATGGACTGGTGTCCAAAGACAGGAGGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417396.2
CDS CAA 72 bp TGTCTTTGGACACCAGTCCATGCAGCAGCAAGGGTGTaGGCTTTGAAGGAAGCCAACTGTCCTGCTCTCCCA +
Preference number: 6 (lower is better)
Translates to: CLWTPVHAAARV*ALKEANCPALP
Trigger: TGGGAGAGCAGGACAGTTGGCTTCCTTCAAAGCCAACACCCTTGCTGCTGCATGGACTGGTGTCCAAAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417396.2
CDS CAA 90 bp TCCTGTCTTTGGACACCAGTCCATGCAGCAGCAAGGGTGTTGGCTTaGAAGGAAGCCAACTGTCCTGCTCTCCCAGCCAGAGGTAAAGAA +
Preference number: 6 (lower is better)
Translates to: SCLWTPVHAAARVLA*KEANCPALPARGKE
Trigger: TTCTTTACCTCTGGCTGGGAGAGCAGGACAGTTGGCTTCCTTCAAAGCCAACACCCTTGCTGCTGCATGGACTGGTGTCCAAAGACAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417396.2
CDS CAA 72 bp GCTGCTGGAATACTGTTGGTGACACAGCGGTTGCTTTaGCTGAGACACCAGAGCTCTCTACACACTTCCCCA +
Preference number: 6 (lower is better)
Translates to: AAGILLVTQRLL*LRHQSSLHTSP
Trigger: TGGGGAAGTGTGTAGAGAGCTCTGGTGTCTCAGCAAAAGCAACCGCTGTGTCACCAACAGTATTCCAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381055.8
ENST00000464680.6
CDS CAA 72 bp CCCTCAGCTGCTGGAATACTGTTGGTGACACAGCGGTaGCTTTTGCTGAGACACCAGAGCTCTCTACACACT +
Preference number: 6 (lower is better)
Translates to: PSAAGILLVTQR*LLLRHQSSLHT
Trigger: AGTGTGTAGAGAGCTCTGGTGTCTCAGCAAAAGCAACCGCTGTGTCACCAACAGTATTCCAGCAGCTGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381055.8
ENST00000464680.6
ENST00000470597.5
CDS CAA 90 bp GTCCCCTCAGCTGCTGGAATACTGTTGGTGACACAGCGGTTGCTTTaGCTGAGACACCAGAGCTCTCTACACACTTCTCTAGAAAGCTGG +
Preference number: 6 (lower is better)
Translates to: VPSAAGILLVTQRLL*LRHQSSLHTSLESW
Trigger: CCAGCTTTCTAGAGAAGTGTGTAGAGAGCTCTGGTGTCTCAGCAAAAGCAACCGCTGTGTCACCAACAGTATTCCAGCAGCTGAGGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470597.5
CDS CAA 90 bp CACAGTGTCCCCTCAGCTGCTGGAATACTGTTGGTGACACAGCGGTaGCTTTTGCTGAGACACCAGAGCTCTCTACACACTTCTCTAGAA +
Preference number: 6 (lower is better)
Translates to: HSVPSAAGILLVTQR*LLLRHQSSLHTSLE
Trigger: TTCTAGAGAAGTGTGTAGAGAGCTCTGGTGTCTCAGCAAAAGCAACCGCTGTGTCACCAACAGTATTCCAGCAGCTGAGGGGACACTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470597.5
CDS CAA 90 bp GTCCCCTCAGCTGCTGGAATACTGTTGGTGACACAGCGGTTGCTTTaGCTGAGACACCAGAGCTCTCTACACACTTCCCCATATTTACAT +
Preference number: 6 (lower is better)
Translates to: VPSAAGILLVTQRLL*LRHQSSLHTSPYLH
Trigger: ATGTAAATATGGGGAAGTGTGTAGAGAGCTCTGGTGTCTCAGCAAAAGCAACCGCTGTGTCACCAACAGTATTCCAGCAGCTGAGGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381055.8
ENST00000464680.6
CDS GCA 72 bp GTCTTTGCGGCCATGGTAGCCCACCATCATTTTGTCTaGCACTACCAATGTCTCCACAAACCGTTCAATGCT +
Preference number: 6 (lower is better)
Translates to: VFAAMVAHHHFV*HYQCLHKPFNA
Trigger: AGCATTGAACGGTTTGTGGAGACATTGGTAGTGGCAGACAAAATGATGGTGGGCTACCATGGCCGCAAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381052.8
ENST00000381055.8
ENST00000464680.6
ENST00000470597.5
ENST00000502886.1
CDS CAA 72 bp GCTGCTGGAATACTGTTGGTGACACAGCGGTTGCTTTaGCTGAGACACCAGAGCTCTCTACACACTTCTCTA +
Preference number: 6 (lower is better)
Translates to: AAGILLVTQRLL*LRHQSSLHTSL
Trigger: TAGAGAAGTGTGTAGAGAGCTCTGGTGTCTCAGCAAAAGCAACCGCTGTGTCACCAACAGTATTCCAGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470597.5
CDS GCA 72 bp TGTCTGCCACTACCAATGTCTCCACAAACCGTTCAATaGTCACTGATCTCTTCTGTCTGTGGTGGATATGTG +
Preference number: 6 (lower is better)
Translates to: CLPLPMSPQTVQ*SLISSVCGGYV
Trigger: CACATATCCACCACAGACAGAAGAGATCAGTGAGCATTGAACGGTTTGTGGAGACATTGGTAGTGGCAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381052.8
ENST00000381055.8
ENST00000464680.6
ENST00000470597.5
ENST00000502886.1
CDS CAA 90 bp AAGAATGTGTTCACGAAAGGCAAACAGCCCACCTTCAAGATAGTCTaGGGAGAAGCACCAGCAGAGACACTCATTGTGCCAAGATGTATT +
Preference number: 6 (lower is better)
Translates to: KNVFTKGKQPTFKIV*GEAPAETLIVPRCI
Trigger: AATACATCTTGGCACAATGAGTGTCTCTGCTGGTGCTTCTCCCAAGACTATCTTGAAGGTGGGCTGTTTGCCTTTCGTGAACACATTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470597.5
CDS TCA 72 bp ATAAGAGATGCCTTCAATACATCTAGGCTATCACTCTaGGATGCTGCCTTTGCAAACCCCCTTTCTCTCCCT +
Preference number: 6 (lower is better)
Translates to: IRDAFNTSRLSL*DAAFANPLSLP
Trigger: AGGGAGAGAAAGGGGGTTTGCAAAGGCAGCATCTCAGAGTGATAGCCTAGATGTATTGAAGGCATCTCTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381055.8
CDS TCA 72 bp CACTACCAATGTCTCCACAAACCGTTCAATGCTCACTaGTCTCTTCTGTCTGTGGTGGATATGTGTGTTGTT +
Preference number: 6 (lower is better)
Translates to: HYQCLHKPFNAH*SLLSVVDMCVV
Trigger: AACAACACACATATCCACCACAGACAGAAGAGATCAGTGAGCATTGAACGGTTTGTGGAGACATTGGTAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381052.8
ENST00000381055.8
ENST00000464680.6
ENST00000470597.5
ENST00000502886.1
CDS CAA 90 bp TGTGAAATCCGAAACCCCACAATGAGAGTGATCATACAGATGTCGTaGTTGAAGGGCAGACTTTTTGTAAATAACATGAGGGTGGCCATT +
Preference number: 6 (lower is better)
Translates to: CEIRNPTMRVIIQMS*LKGRLFVNNMRVAI
Trigger: AATGGCCACCCTCATGTTATTTACAAAAAGTCTGCCCTTCAACAACGACATCTGTATGATCACTCTCATTGTGGGGTTTCGGATTTCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381052.8
ENST00000381055.8
ENST00000464680.6
ENST00000470597.5
ENST00000502886.1
CDS GCA 72 bp TATTCATCACACTCAAAATGTAATGTTCAATGTCTTTaGGGCCATGGTAGCCCACCATCATTTTGTCTGCCA +
Preference number: 6 (lower is better)
Translates to: YSSHSKCNVQCL*GHGSPPSFCLP
Trigger: TGGCAGACAAAATGATGGTGGGCTACCATGGCCGCAAAGACATTGAACATTACATTTTGAGTGTGATGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381052.8
ENST00000381055.8
ENST00000464680.6
ENST00000470597.5
ENST00000502886.1
CDS CAA 72 bp AACCCCACAATGAGAGTGATCATACAGATGTCGTTGTaGAAGGGCAGACTTTTTGTAAATAACATGAGGGTG +
Preference number: 6 (lower is better)
Translates to: NPTMRVIIQMSL*KGRLFVNNMRV
Trigger: CACCCTCATGTTATTTACAAAAAGTCTGCCCTTCAACAACGACATCTGTATGATCACTCTCATTGTGGGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381052.8
ENST00000381055.8
ENST00000464680.6
ENST00000470597.5
ENST00000502886.1
CDS CCA 72 bp AAACCATACCTAGTAATAAGAACTGCATTATCGTGGTaGGCAATCCCATTTTCTGGAATGGTGTTTCCATCA +
Preference number: 6 (lower is better)
Translates to: KPYLVIRTALSW*AIPFSGMVFPS
Trigger: TGATGGAAACACCATTCCAGAAAATGGGATTGCCCACCACGATAATGCAGTTCTTATTACTAGGTATGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502886.1
CDS CCA 72 bp AACAAACCATACCTAGTAATAAGAACTGCATTATCGTaGTGGGCAATCCCATTTTCTGGAATGGTGTTTCCA +
Preference number: 6 (lower is better)
Translates to: NKPYLVIRTALS*WAIPFSGMVFP
Trigger: TGGAAACACCATTCCAGAAAATGGGATTGCCCACCACGATAATGCAGTTCTTATTACTAGGTATGGTTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502886.1
CDS GCA 72 bp AAATACTTGCAACAAACCATACCTAGTAATAAGAACTaGATTATCGTGGTGGGCAATCCCATTTTCTGGAAT +
Preference number: 6 (lower is better)
Translates to: KYLQQTIPSNKN*IIVVGNPIFWN
Trigger: ATTCCAGAAAATGGGATTGCCCACCACGATAATGCAGTTCTTATTACTAGGTATGGTTTGTTGCAAGTATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502886.1