RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADAMTS3 (Homo sapiens)

Ensembl gene IDs: ENSG00000156140

Ensembl transcript IDs: ENST00000286657.10, ENST00000505193.1, ENST00000511274.1, ENST00000622135.1

Found 453 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CACACACAAAAACAAAGGACACCTCAACGGTGCCTACTGAGGTCCTaGAAAGAGGGTTTCAGTTTTGTCTTGCACGAGTTCATTATTTAC +
Preference number: 1 (lower is better)
Translates to: HTQKQRTPQRCLLRS*KEGFSFVLHEFIIY
Trigger: GTAAATAATGAACTCGTGCAAGACAAAACTGAAACCCTCTTTCCAGGACCTCAGTAGGCACCGTTGAGGTGTCCTTTGTTTTTGTGTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286657.10
3UTR TCA 90 bp CCCTGGAGAGAGCATTTCTGGCTTTGCTGTGAGCAAGGTGACTACTaGCATAAATTATTAGCACATTATTGCAGTCAGATGCATTGTGGT +
Preference number: 1 (lower is better)
Translates to: PWREHFWLCCEQGDY*HKLLAHYCSQMHCG
Trigger: ACCACAATGCATCTGACTGCAATAATGTGCTAATAATTTATGTCAGTAGTCACCTTGCTCACAGCAAAGCCAGAAATGCTCTCTCCAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286657.10
3UTR CCA 90 bp CTGACGATCTATAGAGATTTCCACTTTAAACAAGCATATGCACCATaGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTAGCCTT +
Preference number: 1 (lower is better)
Translates to: LTIYRDFHFKQAYAP*EERGCPGFPLVSSL
Trigger: AAGGCTAGAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTGTTTAAAGTGGAAATCTCTATAGATCGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
3UTR CAA 90 bp CAACGGTGCCTACTGAGGTCCTGGAAAGAGGGTTTCAGTTTTGTCTaGCACGAGTTCATTATTTACTATTCGTTGATCCCTGTGACCACA +
Preference number: 2 (lower is better)
Translates to: QRCLLRSWKEGFSFV*HEFIIYYSLIPVTT
Trigger: TGTGGTCACAGGGATCAACGAATAGTAAATAATGAACTCGTGCAAGACAAAACTGAAACCCTCTTTCCAGGACCTCAGTAGGCACCGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286657.10
3UTR-3UTR TCA 90 bp CACACAAAAACAAAGGACACCTCAACGGTGCCTACTGAGGTCCTGGAAAGAGGGACAGATAAAATGAGCTaGCGATCTATAGAGATTTCC +
Preference number: 2 (lower is better)
Translates to: HTKTKDTSTVPTEVLERGTDKMS*RSIEIS
Trigger: GGAAATCTCTATAGATCGTCAGCTCATTTTATCTGT...CCCTCTTTCCAGGACCTCAGTAGGCACCGTTGAGGTGTCCTTTGTTTTTGTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286657.10
3UTR-3UTR TCA 90 bp TACGTGCTCTCAGTACAACAAACAGCATCAGTAGTGTACACTTTGATAAAAAGGCGACATATGCTTTCTTaGACCTGCCTTCAAAGCCCC +
Preference number: 2 (lower is better)
Translates to: YVLSVQQTASVVYTLIKRRHMLS*TCLQSP
Trigger: GGGGCTTTGAAGGCAGGTTCAAGAAAGCATATGTCG...CCTTTTTATCAAAGTGTACACTACTGATGCTGTTTGTTGTACTGAGAGCACGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286657.10
3UTR-3UTR CCA 90 bp CTTCAAAGCCCCAAAGCTCTACTATACTCAAATATCAATTCTAGACTGATGATACAAGCATATGCACCATaGGAAGAGAGAGGTTGTCCA +
Preference number: 2 (lower is better)
Translates to: LQSPKALLYSNINSRLMIQAYAP*EERGCP
Trigger: TGGACAACCTCTCTCTTCCCATGGTGCATATGCTTG...TATCATCAGTCTAGAATTGATATTTGAGTATAGTAGAGCTTTGGGGCTTTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
3UTR CAA 90 bp GAGGGTTTCAGTTTTGTCTTGCACGAGTTCATTATTTACTATTCGTaGATCCCTGTGACCACAAGTGTACTAAGACACCAATCCTTTAAA +
Preference number: 2 (lower is better)
Translates to: EGFSFVLHEFIIYYS*IPVTTSVLRHQSFK
Trigger: TTTAAAGGATTGGTGTCTTAGTACACTTGTGGTCACAGGGATCAACGAATAGTAAATAATGAACTCGTGCAAGACAAAACTGAAACCCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286657.10
3UTR-3UTR TCA 90 bp AAACAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTACAGATAAAATGAGCTaGCGATCTATAGAGATTTCC +
Preference number: 2 (lower is better)
Translates to: KQTKSQLICTIGSSPFSATDKMS*RSIEIS
Trigger: GGAAATCTCTATAGATCGTCAGCTCATTTTATCTGT...AGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
3UTR-3UTR TCA 90 bp TACTATTCGTTGATCCCTGTGACCACAAGTGTACTAAGACACCAATCCTTTAAAAAACAAAAAGTCAGCTaGTATGCACAATTGGTTCCA +
Preference number: 2 (lower is better)
Translates to: YYSLIPVTTSVLRHQSFKKQKVS*YAQLVP
Trigger: TGGAACCAATTGTGCATATCAGCTGACTTTTTGTTT...TTTAAAGGATTGGTGTCTTAGTACACTTGTGGTCACAGGGATCAACGAATAGTA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000286657.10
3UTR CAA 90 bp GACTTAAGGCTTAGGGATTGTTTTACTATCTGGAATTTGCCTAATTaGACCTTCAAAGTTCTTGCACAAAGTAGCAGCAATTCTTTAGAG +
Preference number: 2 (lower is better)
Translates to: DLRLRDCFTIWNLPN*TFKVLAQSSSNSLE
Trigger: CTCTAAAGAATTGCTGCTACTTTGTGCAAGAACTTTGAAGGTCAAATTAGGCAAATTCCAGATAGTAAAACAATCCCTAAGCCTTAAGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286657.10
3UTR CAA 90 bp AAAGGTCAGAAGTATAATGAATATGTACATCTTTATGGAAACTGTTaGTGTGACCATCTTTATCTTCCCCTGTGGATGAGATGTATGCAC +
Preference number: 2 (lower is better)
Translates to: KGQKYNEYVHLYGNC*CDHLYLPLWMRCMH
Trigger: GTGCATACATCTCATCCACAGGGGAAGATAAAGATGGTCACACAAACAGTTTCCATAAAGATGTACATATTCATTATACTTCTGACCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286657.10
3UTR-3UTR TCA 90 bp CTTCAAAGCCCCAAAGCTCTACTATACTCAAATATCAATTCTAGACTGATGATAGGTGATTTCTTCCAATaGATTCTGGTAAATGAGTCA +
Preference number: 2 (lower is better)
Translates to: LQSPKALLYSNINSRLMIGDFFQ*ILVNES
Trigger: TGACTCATTTACCAGAATTCATTGGAAGAAATCACC...TATCATCAGTCTAGAATTGATATTTGAGTATAGTAGAGCTTTGGGGCTTTGAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
3UTR-3UTR GCA 90 bp AAAGACTTAAGGCTTAGGGATTGTTTTACTATCTGGAATTTGCCTAATTTGACCTTCTTGCACATTCTGTaGTTTGAGAGGTTAATTCAT +
Preference number: 2 (lower is better)
Translates to: KDLRLRDCFTIWNLPNLTFLHIL*FERLIH
Trigger: ATGAATTAACCTCTCAAAGCACAGAATGTGCAAGAA...GGTCAAATTAGGCAAATTCCAGATAGTAAAACAATCCCTAAGCCTTAAGTCTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286657.10
3UTR CCA 72 bp AAACAAAGGACACCTCAACGGTGCCTACTGAGGTCCTaGAAAGAGGGTTTCAGTTTTGTCTTGCACGAGTTC +
Preference number: 3 (lower is better)
Translates to: KQRTPQRCLLRS*KEGFSFVLHEF
Trigger: GAACTCGTGCAAGACAAAACTGAAACCCTCTTTCCAGGACCTCAGTAGGCACCGTTGAGGTGTCCTTTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286657.10
3UTR CCA 72 bp TATAGAGATTTCCACTTTAAACAAGCATATGCACCATaGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTT +
Preference number: 3 (lower is better)
Translates to: YRDFHFKQAYAP*EERGCPGFPLV
Trigger: AACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTGTTTAAAGTGGAAATCTCTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
3UTR TCA 72 bp GAGCATTTCTGGCTTTGCTGTGAGCAAGGTGACTACTaGCATAAATTATTAGCACATTATTGCAGTCAGATG +
Preference number: 3 (lower is better)
Translates to: EHFWLCCEQGDY*HKLLAHYCSQM
Trigger: CATCTGACTGCAATAATGTGCTAATAATTTATGTCAGTAGTCACCTTGCTCACAGCAAAGCCAGAAATGCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286657.10
3UTR GCA 72 bp TGTTCAGTTTTAGCTTTTGAGTTGGCTGTAGTAGTTTaGTTAAAGGTCTCTATGCACAGAACAAAGCATGCA +
Preference number: 3 (lower is better)
Translates to: CSVLAFELAVVV*LKVSMHRTKHA
Trigger: TGCATGCTTTGTTCTGTGCATAGAGACCTTTAAGCAAACTACTACAGCCAACTCAAAAGCTAAAACTGAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286657.10
3UTR-3UTR CAA 90 bp AAAGACTTAAGGCTTAGGGATTGTTTTACTATCTGGAATTTGCCTAATTTGACCAAGAGGGTTTCAGTTTaGTCTTGCACGAGTTCATTA +
Preference number: 3 (lower is better)
Translates to: KDLRLRDCFTIWNLPNLTKRVSV*SCTSSL
Trigger: TAATGAACTCGTGCAAGACAAAACTGAAACCCTCTT...GGTCAAATTAGGCAAATTCCAGATAGTAAAACAATCCCTAAGCCTTAAGTCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286657.10
3UTR TCA 72 bp TTAGGGATTGTTTTACTATCTGGAATTTGCCTAATTTaGCCTTCAAAGTTCTTGCACAAAGTAGCAGCAATT +
Preference number: 3 (lower is better)
Translates to: LGIVLLSGICLI*PSKFLHKVAAI
Trigger: AATTGCTGCTACTTTGTGCAAGAACTTTGAAGGTCAAATTAGGCAAATTCCAGATAGTAAAACAATCCCTAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286657.10
3UTR GCA 72 bp AGTTTGCTTAAAGGTCTCTATGCACAGAACAAAGCATaGATCTCTAATTATGTCTCTCTAGTTTACCAAAAT +
Preference number: 3 (lower is better)
Translates to: SLLKGLYAQNKA*ISNYVSLVYQN
Trigger: ATTTTGGTAAACTAGAGAGACATAATTAGAGATGCATGCTTTGTTCTGTGCATAGAGACCTTTAAGCAAACT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR GCA 90 bp CACACAAAAACAAAGGACACCTCAACGGTGCCTACTGAGGTCCTGGAAAGAGGGGTGGCAGGGTGCTACTaGGCTTGCTGCAGGACTCAC +
Preference number: 4 (lower is better)
Translates to: HTKTKDTSTVPTEVLERGVAGCY*ACCRTH
Trigger: GTGAGTCCTGCAGCAAGCGCAGTAGCACCCTGCCAC...CCCTCTTTCCAGGACCTCAGTAGGCACCGTTGAGGTGTCCTTTGTTTTTGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR GCA 90 bp CACACAAAAACAAAGGACACCTCAACGGTGCCTACTGAGGTCCTGGAAAGAGGGGCACAGAGCGGTTGGTaGCATCAAGGAGTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: HTKTKDTSTVPTEVLERGAQSGW*HQGVAE
Trigger: TTCAGCCACTCCTTGATGGCACCAACCGCTCTGTGC...CCCTCTTTCCAGGACCTCAGTAGGCACCGTTGAGGTGTCCTTTGTTTTTGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR GCA 90 bp ATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTAGCCTTTATGGTGGTGGCAGGGTaGTACTGCGCTTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: MHHGKREVVQVFLWFLAFMVVAG*YCACCR
Trigger: CCTGCAGCAAGCGCAGTAGCACCCTGCCACCACCAT...AAAGGCTAGAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR GCA 90 bp CACACAAAAACAAAGGACACCTCAACGGTGCCTACTGAGGTCCTGGAAAGAGGGAGGACACCTCAACGGTaGCTACTGAGGTCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: HTKTKDTSTVPTEVLERGRTPQR*LLRSWK
Trigger: TTTCCAGGACCTCAGTAGGCACCGTTGAGGTGTCCT...CCCTCTTTCCAGGACCTCAGTAGGCACCGTTGAGGTGTCCTTTGTTTTTGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR TCA 90 bp TATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATCCCATCAAGGAGTGGCTaGAGGCAGCGTACAGTGCGA +
Preference number: 4 (lower is better)
Translates to: YAQLVPVPFLLQRATNTIPSRSG*RQRTVR
Trigger: TCGCACTGTACGCTGCCTTCAGCCACTCCTTGATGG...GATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAATTGTGCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp ACAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCGCAGTTGACAGGCTCTaGCCGACTCAGGCTTTTCAC +
Preference number: 4 (lower is better)
Translates to: TSICTMGRERLSRFSSGFAVDRL*PTQAFH
Trigger: GTGAAAAGCCTGAGTCGGTCAGAGCCTGTCAACTGC...GAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp ATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTAGCCTTTGGGAGGATGGTACGGTaGCCAGTCTCACAGTCTTAC +
Preference number: 4 (lower is better)
Translates to: MHHGKREVVQVFLWFLAFGRMVR*PVSQSY
Trigger: GTAAGACTGTGAGACTGGTCACCGTACCATCCTCCC...AAAGGCTAGAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR GCA 90 bp ATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTAGCCTTTTCCCAACACAGAGTGTaGAGGAGCGAGAAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: MHHGKREVVQVFLWFLAFSQHRV*RSEKVL
Trigger: CAGCACCTTCTCGCTCCTGCACACTCTGTGTTGGGA...AAAGGCTAGAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR GCA 90 bp ATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTAGCCTTTGCACAGAGCGGTTGGTaGCATCAAGGAGTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: MHHGKREVVQVFLWFLAFAQSGW*HQGVAE
Trigger: TTCAGCCACTCCTTGATGGCACCAACCGCTCTGTGC...AAAGGCTAGAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp CACACAAAAACAAAGGACACCTCAACGGTGCCTACTGAGGTCCTGGAAAGAGGGACGTGCTCTTTGCCATaGAAACGGACCACAGAGTCA +
Preference number: 4 (lower is better)
Translates to: HTKTKDTSTVPTEVLERGTCSLP*KRTTES
Trigger: TGACTCTGTGGTCCGTTTCCATGGCAAAGAGCACGT...CCCTCTTTCCAGGACCTCAGTAGGCACCGTTGAGGTGTCCTTTGTTTTTGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR CCA 90 bp ACAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCGGTGCCATCAAGGAGTaGCTGAAGGCAGCGTACAGT +
Preference number: 4 (lower is better)
Translates to: TSICTMGRERLSRFSSGFGAIKE*LKAAYS
Trigger: ACTGTACGCTGCCTTCAGCCACTCCTTGATGGCACC...GAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp CAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTGGTGCCATCAAGGAGTaGCTGAAGGCAGCGTACAGT +
Preference number: 4 (lower is better)
Translates to: QAYAPWEERGCPGFPLVSGAIKE*LKAAYS
Trigger: ACTGTACGCTGCCTTCAGCCACTCCTTGATGGCACC...AGAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp TATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATCGAAGCTGAACTGAGGTaGACCCTCTTGGTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: YAQLVPVPFLLQRATNTIEAELR*TLLVGG
Trigger: CCCACCCACCAAGAGGGTCCACCTCAGTTCAGCTTC...GATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAATTGTGCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp CACACAAAAACAAAGGACACCTCAACGGTGCCTACTGAGGTCCTGGAAAGAGGGGCTGACCTCTTTTTGTaGCTCGCAGAAAGAGTATGG +
Preference number: 4 (lower is better)
Translates to: HTKTKDTSTVPTEVLERGADLFL*LAERVW
Trigger: CCATACTCTTTCTGCGAGTCACAAAAAGAGGTCAGC...CCCTCTTTCCAGGACCTCAGTAGGCACCGTTGAGGTGTCCTTTGTTTTTGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR TCA 90 bp TATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATCAGACACGTCCCTCGCTaGCCTCTTTTTGTGACTCGC +
Preference number: 4 (lower is better)
Translates to: YAQLVPVPFLLQRATNTIRHVPR*PLFVTR
Trigger: GCGAGTCACAAAAAGAGGTCAGCGAGGGACGTGTCT...GATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAATTGTGCATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp CAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTTGCACTGGCGTGTTCTaGAACGAACACCAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: QAYAPWEERGCPGFPLVSCTGVF*NEHQFH
Trigger: GTGGAACTGGTGTTCGTTTCAGAACACGCCAGTGCA...AGAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp ATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATCTTAGCAACGGGAGGATGGTACGGTaGCCAGTCTCACAGTCTTAC +
Preference number: 4 (lower is better)
Translates to: IGSSPFSASESDQHNLSNGRMVR*PVSQSY
Trigger: GTAAGACTGTGAGACTGGTCACCGTACCATCCTCCC...GTTGCTAAGATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp ACAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTTTGTGAAGCTGAACTaGGGTGGACCCTCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: TSICTMGRERLSRFSSGFFVKLN*GGPSWW
Trigger: CCACCAAGAGGGTCCACCTCAGTTCAGCTTCACAAA...GAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR GCA 90 bp CAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTGAAGGCAGCGTACAGTaGGAAGCTGATAGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: QAYAPWEERGCPGFPLVSEGSVQ*EADSQN
Trigger: GTTCTGGCTATCAGCTTCGCACTGTACGCTGCCTTC...AGAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR GCA 90 bp ATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTAGCCTTTCACCCATGCAGTATTTaGTGTGCACAGAGCGGTTGG +
Preference number: 4 (lower is better)
Translates to: MHHGKREVVQVFLWFLAFHPCSI*CAQSGW
Trigger: CCAACCGCTCTGTGCACAGCAAATACTGCATGGGTG...AAAGGCTAGAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR GCA 90 bp ATTTCCACTTTAAACAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTGTGGCAGGGTGCTACTaGGCTTGCTGCAGGACTCAC +
Preference number: 4 (lower is better)
Translates to: ISTLNKHMHHGKREVVQVVAGCY*ACCRTH
Trigger: GTGAGTCCTGCAGCAAGCGCAGTAGCACCCTGCCAC...AACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTGTTTAAAGTGGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp CAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTCTTTTCGAGCACCATTaGTCCCTAAGGTTAGCGCGG +
Preference number: 4 (lower is better)
Translates to: QAYAPWEERGCPGFPLVSLFEHH*SLRLAR
Trigger: CCGCGCTAACCTTAGGGACCAATGGTGCTCGAAAAG...AGAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR CCA 90 bp CACACAAAAACAAAGGACACCTCAACGGTGCCTACTGAGGTCCTGGAAAGAGGGCTCCAAGCTTCTGGATaGGTTTCCCCTTTCTATGAG +
Preference number: 4 (lower is better)
Translates to: HTKTKDTSTVPTEVLERGLQASG*VSPFYE
Trigger: CTCATAGAAAGGGGAAACCCATCCAGAAGCTTGGAG...CCCTCTTTCCAGGACCTCAGTAGGCACCGTTGAGGTGTCCTTTGTTTTTGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR TCA 90 bp ATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATCTTAGCAACATGAAATTTGAGCTCTaGGACTGGCCCCCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: IGSSPFSASESDQHNLSNMKFEL*DWPPLL
Trigger: GAGCAGAGGGGGCCAGTCTCAGAGCTCAAATTTCAT...GTTGCTAAGATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR TCA 90 bp ACAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCAGCTTGTCCATCAGCTaGAGTCCTAACCTCTACCAG +
Preference number: 4 (lower is better)
Translates to: TSICTMGRERLSRFSSGFSLSIS*SPNLYQ
Trigger: CTGGTAGAGGTTAGGACTTCAGCTGATGGACAAGCT...GAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp ATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATCTTAGCAACGACCATCACAGTTGCTaGTGGCAACAGAGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: IGSSPFSASESDQHNLSNDHHSC*WQQRFL
Trigger: CAGGAACCTCTGTTGCCATCAGCAACTGTGATGGTC...GTTGCTAAGATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp TATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATCACACCAGGACAATCCTaGCCACCATTGATGGGCATG +
Preference number: 4 (lower is better)
Translates to: YAQLVPVPFLLQRATNTITPGQS*PPLMGM
Trigger: CATGCCCATCAATGGTGGTCAGGATTGTCCTGGTGT...GATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAATTGTGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp ATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATCTTAGCAACCCACACCAAGATCTATaGAGGTCCGCGACTTGGCTT +
Preference number: 4 (lower is better)
Translates to: IGSSPFSASESDQHNLSNPHQDL*RSATWL
Trigger: AAGCCAAGTCGCGGACCTTCATAGATCTTGGTGTGG...GTTGCTAAGATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp ATTTCCACTTTAAACAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTCCATCAAGGAGTGGCTaGAGGCAGCGTACAGTGCGA +
Preference number: 4 (lower is better)
Translates to: ISTLNKHMHHGKREVVQVPSRSG*RQRTVR
Trigger: TCGCACTGTACGCTGCCTTCAGCCACTCCTTGATGG...AACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTGTTTAAAGTGGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp ACAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTTACTTCCTGCTTGCTaGGCACTCCTCTGGCGTAAA +
Preference number: 4 (lower is better)
Translates to: TSICTMGRERLSRFSSGFLLPAC*ALLWRK
Trigger: TTTACGCCAGAGGAGTGCTCAGCAAGCAGGAAGTAA...GAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR GCA 90 bp CAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTTTTCTCCCGCGTGTCTaGGGCGTCTCATTGTTTCAT +
Preference number: 4 (lower is better)
Translates to: QAYAPWEERGCPGFPLVSFLPRV*GVSLFH
Trigger: ATGAAACAATGAGACGCCGCAGACACGCGGGAGAAA...AGAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR GCA 90 bp ACAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCATGCAGTATTTGCTGTaGACAGAGCGGTTGGTGCCA +
Preference number: 4 (lower is better)
Translates to: TSICTMGRERLSRFSSGFMQYLL*TERLVP
Trigger: TGGCACCAACCGCTCTGTGCACAGCAAATACTGCAT...GAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp GCACGAGTTCATTATTTACTATTCGTTGATCCCTGTGACCACAAGTGTACTAAGAGCGCGGAGAATGCTTaGGTTCCCCGGAGCACAGCA +
Preference number: 4 (lower is better)
Translates to: ARVHYLLFVDPCDHKCTKSAENA*VPRSTA
Trigger: TGCTGTGCTCCGGGGAACCCAAGCATTCTCCGCGCT...CTTAGTACACTTGTGGTCACAGGGATCAACGAATAGTAAATAATGAACTCGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR CCA 90 bp ACAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCACACATGCCGGTGACTaGAGCATATCCTTGCATTCC +
Preference number: 4 (lower is better)
Translates to: TSICTMGRERLSRFSSGFTHAGD*SISLHS
Trigger: GGAATGCAAGGATATGCTCCAGTCACCGGCATGTGT...GAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp ATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTAGCCTTTGGTACAACTTCTCACTaGATGACACATGCCGGTGAC +
Preference number: 4 (lower is better)
Translates to: MHHGKREVVQVFLWFLAFGTTSH*MTHAGD
Trigger: GTCACCGGCATGTGTCATCCAGTGAGAAGTTGTACC...AAAGGCTAGAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp ACAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTCCATTCCCAACACATaGCCCGTTTCATGGGCTACT +
Preference number: 4 (lower is better)
Translates to: TSICTMGRERLSRFSSGFSIPNT*PVSWAT
Trigger: AGTAGCCCATGAAACGGGCCATGTGTTGGGAATGGA...GAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp ATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTAGCCTTTTCCATTCCCAACACATaGCCCGTTTCATGGGCTACT +
Preference number: 4 (lower is better)
Translates to: MHHGKREVVQVFLWFLAFSIPNT*PVSWAT
Trigger: AGTAGCCCATGAAACGGGCCATGTGTTGGGAATGGA...AAAGGCTAGAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp CAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTCCACAGCTGTTTACATaGGTCAAAGGTTCGGAACGC +
Preference number: 4 (lower is better)
Translates to: QAYAPWEERGCPGFPLVSPQLFT*VKGSER
Trigger: GCGTTCCGAACCTTTGACCCATGTAAACAGCTGTGG...AGAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp ATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTAGCCTTTCATCTCCAGTCTCCTTaGACTGACAGTAAAGGTGGC +
Preference number: 4 (lower is better)
Translates to: MHHGKREVVQVFLWFLAFHLQSP*TDSKGG
Trigger: GCCACCTTTACTGTCAGTCCAAGGAGACTGGAGATG...AAAGGCTAGAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp ATATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATTGTGCACAGAGCGGTTaGTGCCATCAAGGAGTGGCT +
Preference number: 4 (lower is better)
Translates to: ICTIGSSPFSASESDQHNCAQSG*CHQGVA
Trigger: AGCCACTCCTTGATGGCACCAACCGCTCTGTGCACA...ATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAATTGTGCATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp CAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAGACCCTCTTGGTGGGTaGGGAGGATGGTACGGTGAC +
Preference number: 4 (lower is better)
Translates to: QTKSQLICTIGSSPFSASDPLGG*GGWYGD
Trigger: GTCACCGTACCATCCTCCCCACCCACCAAGAGGGTC...TGAAGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp TACTATTCGTTGATCCCTGTGACCACAAGTGTACTAAGACACCAATCCTTTAAAGGTGGACCCTCTTGGTaGGTGGGGAGGATGGTACGG +
Preference number: 4 (lower is better)
Translates to: YYSLIPVTTSVLRHQSFKGGPSW*VGRMVR
Trigger: CCGTACCATCCTCCCCACCCACCAAGAGGGTCCACC...TTTAAAGGATTGGTGTCTTAGTACACTTGTGGTCACAGGGATCAACGAATAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR CCA 90 bp AAACAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTGGTGGACCCTCTTGGTaGGTGGGGAGGATGGTACGG +
Preference number: 4 (lower is better)
Translates to: KQTKSQLICTIGSSPFSAGGPSW*VGRMVR
Trigger: CCGTACCATCCTCCCCACCCACCAAGAGGGTCCACC...AGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp CACACAAAAACAAAGGACACCTCAACGGTGCCTACTGAGGTCCTGGAAAGAGGGGAAAAACCATCCTCATaGTTCAGGGTACAACTTCTC +
Preference number: 4 (lower is better)
Translates to: HTKTKDTSTVPTEVLERGEKPSS*FRVQLL
Trigger: GAGAAGTTGTACCCTGAATCATGAGGATGGTTTTTC...CCCTCTTTCCAGGACCTCAGTAGGCACCGTTGAGGTGTCCTTTGTTTTTGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR TCA 90 bp ATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTAGCCTTTGCCAAATTTAGTCCATaGCCCCCAATTGCCATCTTG +
Preference number: 4 (lower is better)
Translates to: MHHGKREVVQVFLWFLAFAKFSP*PPIAIL
Trigger: CAAGATGGCAATTGGGGGTCATGGACTAAATTTGGC...AAAGGCTAGAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp ATATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATCCACACCAAGATCTATaGAGGTCCGCGACTTGGCTT +
Preference number: 4 (lower is better)
Translates to: ICTIGSSPFSASESDQHNPHQDL*RSATWL
Trigger: AAGCCAAGTCGCGGACCTTCATAGATCTTGGTGTGG...ATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAATTGTGCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp ATATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATCAGGGTTTGGAACACTaGGACCAGCTCTTCAAAGCC +
Preference number: 4 (lower is better)
Translates to: ICTIGSSPFSASESDQHNQGLEH*DQLFKA
Trigger: GGCTTTGAAGAGCTGGTCTCAGTGTTCCAAACCCTG...ATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAATTGTGCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp AAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTAGCCTTTTTGGTTCACTTTCTCAACGGTGCCTACTaGGGTCCTGGAAAGAGGGTT +
Preference number: 4 (lower is better)
Translates to: KREVVQVFLWFLAFLVHFLNGAY*GPGKRV
Trigger: AACCCTCTTTCCAGGACCTCAGTAGGCACCGTTGAG...AAAGTGAACCAAAAAGGCTAGAAACCAGAGGAAAACCTGGACAACCTCTCTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR GCA 90 bp AAACAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTGCAGGAGCGAGAAGGTaGTGTAAGCGGGCACAGGCT +
Preference number: 4 (lower is better)
Translates to: KQTKSQLICTIGSSPFSAAGARR*CKRAQA
Trigger: AGCCTGTGCCCGCTTACAGCACCTTCTCGCTCCTGC...AGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR GCA 90 bp CAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTTTGCCTTGTCCATCATaGTCCATTCCCAACACATGG +
Preference number: 4 (lower is better)
Translates to: QAYAPWEERGCPGFPLVSLPCPS*SIPNTW
Trigger: CCATGTGTTGGGAATGGAGCATGATGGACAAGGCAA...AGAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR GCA 90 bp TATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATCCATCACCACACCTGTTaGCTTGTCCATCATGCTCCA +
Preference number: 4 (lower is better)
Translates to: YAQLVPVPFLLQRATNTIHHHTC*LVHHAP
Trigger: TGGAGCATGATGGACAAGGCAACAGGTGTGGTGATG...GATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAATTGTGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR GCA 90 bp ATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATCTTAGCAACCATCACCACACCTGTTaGCTTGTCCATCATGCTCCA +
Preference number: 4 (lower is better)
Translates to: IGSSPFSASESDQHNLSNHHHTC*LVHHAP
Trigger: TGGAGCATGATGGACAAGGCAACAGGTGTGGTGATG...GTTGCTAAGATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR GCA 90 bp TATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATCTCAGTTCTTGACCACTaGATCGGGACCAGTGGTAAC +
Preference number: 4 (lower is better)
Translates to: YAQLVPVPFLLQRATNTISVLDH*IGTSGN
Trigger: GTTACCACTGGTCCCGATGCAGTGGTCAAGAACTGA...GATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAATTGTGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR GCA 90 bp CAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTGTGTTCCCATTCTTCTaGTACCCAGAGTGGATGTGT +
Preference number: 4 (lower is better)
Translates to: QAYAPWEERGCPGFPLVSVFPFF*YPEWMC
Trigger: ACACATCCACTCTGGGTAGCAGAAGAATGGGAACAC...AGAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR GCA 90 bp ATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATCTTAGCAACATGCAGTATTTGCTGTaGACAGAGCGGTTGGTGCCA +
Preference number: 4 (lower is better)
Translates to: IGSSPFSASESDQHNLSNMQYLL*TERLVP
Trigger: TGGCACCAACCGCTCTGTGCACAGCAAATACTGCAT...GTTGCTAAGATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR GCA 90 bp ATTTCCACTTTAAACAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTCGGGACGGTCACCCATaGAGTATTTGCTGTGCACAG +
Preference number: 4 (lower is better)
Translates to: ISTLNKHMHHGKREVVQVRDGHP*SICCAQ
Trigger: CTGTGCACAGCAAATACTGCATGGGTGACCGTCCCG...AACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTGTTTAAAGTGGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR GCA 90 bp CAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTTGCTACTGCGCTTGCTaGAGGACTCACAACATAACT +
Preference number: 4 (lower is better)
Translates to: QAYAPWEERGCPGFPLVSCYCAC*RTHNIT
Trigger: AGTTATGTTGTGAGTCCTGCAGCAAGCGCAGTAGCA...AGAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR GCA 90 bp AAACAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTATGGTGGTGGCAGGGTaGTACTGCGCTTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: KQTKSQLICTIGSSPFSAMVVAG*YCACCR
Trigger: CCTGCAGCAAGCGCAGTAGCACCCTGCCACCACCAT...AGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR GCA 90 bp ATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTAGCCTTTTTCCAGTCCCTTTTCTaGTTCAGAGAGCGACCAACA +
Preference number: 4 (lower is better)
Translates to: MHHGKREVVQVFLWFLAFFQSLF*FRERPT
Trigger: TGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAA...AAAGGCTAGAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp ATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATCTTAGCAACACACATGCCGGTGACTaGAGCATATCCTTGCATTCC +
Preference number: 4 (lower is better)
Translates to: IGSSPFSASESDQHNLSNTHAGD*SISLHS
Trigger: GGAATGCAAGGATATGCTCCAGTCACCGGCATGTGT...GTTGCTAAGATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp ATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATCTTAGCAACCATCTCCAGTCTCCTTaGACTGACAGTAAAGGTGGC +
Preference number: 4 (lower is better)
Translates to: IGSSPFSASESDQHNLSNHLQSP*TDSKGG
Trigger: GCCACCTTTACTGTCAGTCCAAGGAGACTGGAGATG...GTTGCTAAGATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp AAACAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTGGTGGGTGGGGAGGATaGTACGGTGACCAGTCTCAC +
Preference number: 4 (lower is better)
Translates to: KQTKSQLICTIGSSPFSAGGWGG*YGDQSH
Trigger: GTGAGACTGGTCACCGTACCATCCTCCCCACCCACC...AGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp CAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAGAAGCTGAACTGAGGTaGACCCTCTTGGTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: QTKSQLICTIGSSPFSASEAELR*TLLVGG
Trigger: CCCACCCACCAAGAGGGTCCACCTCAGTTCAGCTTC...TGAAGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp ACAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCCAAGCATATGCACCATaGGAAGAGAGAGGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: TSICTMGRERLSRFSSGFQAYAP*EERGCP
Trigger: TGGACAACCTCTCTCTTCCCATGGTGCATATGCTTG...GAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp GCACGAGTTCATTATTTACTATTCGTTGATCCCTGTGACCACAAGTGTACTAAGAGACACGTCCCTCGCTaGCCTCTTTTTGTGACTCGC +
Preference number: 4 (lower is better)
Translates to: ARVHYLLFVDPCDHKCTKRHVPR*PLFVTR
Trigger: GCGAGTCACAAAAAGAGGTCAGCGAGGGACGTGTCT...CTTAGTACACTTGTGGTCACAGGGATCAACGAATAGTAAATAATGAACTCGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR TCA 90 bp AAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTAGCCTTTTTGGTTCACTTTCCAGGAGCTACTAGTTaGGTGTTGGGCTTTAGTCGC +
Preference number: 4 (lower is better)
Translates to: KREVVQVFLWFLAFLVHFPGATS*VLGFSR
Trigger: GCGACTAAAGCCCAACACTCAACTAGTAGCTCCTGG...AAAGTGAACCAAAAAGGCTAGAAACCAGAGGAAAACCTGGACAACCTCTCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp ATTTCCACTTTAAACAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTGACCATCACAGTTGCTaGTGGCAACAGAGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: ISTLNKHMHHGKREVVQVDHHSC*WQQRFL
Trigger: CAGGAACCTCTGTTGCCATCAGCAACTGTGATGGTC...AACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTGTTTAAAGTGGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp ATTTCCACTTTAAACAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTACAAGGAGGCAGTTaGCAGGCTCTGACCGACTCA +
Preference number: 4 (lower is better)
Translates to: ISTLNKHMHHGKREVVQVLQGGS*QALTDS
Trigger: TGAGTCGGTCAGAGCCTGTCAACTGCCTCCTTGTAA...AACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTGTTTAAAGTGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp AAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTAGCCTTTTTGGTTCACTTTTTACAAGGAGGCAGTTaGCAGGCTCTGACCGACTCA +
Preference number: 4 (lower is better)
Translates to: KREVVQVFLWFLAFLVHFLQGGS*QALTDS
Trigger: TGAGTCGGTCAGAGCCTGTCAACTGCCTCCTTGTAA...AAAGTGAACCAAAAAGGCTAGAAACCAGAGGAAAACCTGGACAACCTCTCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp ACAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCATTTGGACCTCCCACTaGAGAGATGCTACTCAAAGA +
Preference number: 4 (lower is better)
Translates to: TSICTMGRERLSRFSSGFIWTSH*RDATQR
Trigger: TCTTTGAGTAGCATCTCTTCAGTGGGAGGTCCAAAT...GAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp CACACAAAAACAAAGGACACCTCAACGGTGCCTACTGAGGTCCTGGAAAGAGGGGGAATTTGCCTAATTTaGCCTTCAAAGTTCTTGCAC +
Preference number: 4 (lower is better)
Translates to: HTKTKDTSTVPTEVLERGGICLI*PSKFLH
Trigger: GTGCAAGAACTTTGAAGGTCAAATTAGGCAAATTCC...CCCTCTTTCCAGGACCTCAGTAGGCACCGTTGAGGTGTCCTTTGTTTTTGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR GCA 90 bp ATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTAGCCTTTGCTGCTGGTGGATGTTaGCATAAACAGTACCTAGAT +
Preference number: 4 (lower is better)
Translates to: MHHGKREVVQVFLWFLAFAAGGC*HKQYLD
Trigger: ATCTAGGTACTGTTTATGGCAACATCCACCAGCAGC...AAAGGCTAGAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR GCA 90 bp ACAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCAGGACCACATTTATATaGACTCCGAGGGACTCATCA +
Preference number: 4 (lower is better)
Translates to: TSICTMGRERLSRFSSGFRTTFI*TPRDSS
Trigger: TGATGAGTCCCTCGGAGTGCATATAAATGTGGTCCT...GAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR GCA 90 bp TATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATCACTGGAGCATATCCTTaGATTCCAGCAGGTCCAAAG +
Preference number: 4 (lower is better)
Translates to: YAQLVPVPFLLQRATNTITGAYP*IPAGPK
Trigger: CTTTGGACCTGCTGGAATGCAAGGATATGCTCCAGT...GATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAATTGTGCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR GCA 90 bp TATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATCTTGCCTTGTCCATCATaGTCCATTCCCAACACATGG +
Preference number: 4 (lower is better)
Translates to: YAQLVPVPFLLQRATNTILPCPS*SIPNTW
Trigger: CCATGTGTTGGGAATGGAGCATGATGGACAAGGCAA...GATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAATTGTGCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR GCA 90 bp ATATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATCTGCTGACACTGCTGTaGTCTGAAGTCCTCAAAGTG +
Preference number: 4 (lower is better)
Translates to: ICTIGSSPFSASESDQHNLLTLL*SEVLKV
Trigger: CACTTTGAGGACTTCAGAGCACAGCAGTGTCAGCAG...ATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAATTGTGCATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR GCA 90 bp ATTTCCACTTTAAACAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTCCTGTTTTCCACTGTaGAGGGCAGGGCACTCTGTT +
Preference number: 4 (lower is better)
Translates to: ISTLNKHMHHGKREVVQVSCFPL*RAGHSV
Trigger: AACAGAGTGCCCTGCCCTGCACAGTGGAAAACAGGA...AACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTGTTTAAAGTGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR GCA 90 bp AAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTAGCCTTTTTGGTTCACTTTTCCTGTTTTCCACTGTaGAGGGCAGGGCACTCTGTT +
Preference number: 4 (lower is better)
Translates to: KREVVQVFLWFLAFLVHFSCFPL*RAGHSV
Trigger: AACAGAGTGCCCTGCCCTGCACAGTGGAAAACAGGA...AAAGTGAACCAAAAAGGCTAGAAACCAGAGGAAAACCTGGACAACCTCTCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR GCA 90 bp AAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTAGCCTTTTTGGTTCACTTTGGGTGCTACTGCGCTTaGTGCAGGACTCACAACATA +
Preference number: 4 (lower is better)
Translates to: KREVVQVFLWFLAFLVHFGCYCA*CRTHNI
Trigger: TATGTTGTGAGTCCTGCAGCAAGCGCAGTAGCACCC...AAAGTGAACCAAAAAGGCTAGAAACCAGAGGAAAACCTGGACAACCTCTCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR GCA 90 bp CACACAAAAACAAAGGACACCTCAACGGTGCCTACTGAGGTCCTGGAAAGAGGGTTGGCTGTAGTAGTTTaGTTAAAGGTCTCTATGCAC +
Preference number: 4 (lower is better)
Translates to: HTKTKDTSTVPTEVLERGLAVVV*LKVSMH
Trigger: GTGCATAGAGACCTTTAAGCAAACTACTACAGCCAA...CCCTCTTTCCAGGACCTCAGTAGGCACCGTTGAGGTGTCCTTTGTTTTTGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR CCA 90 bp ATTTCCACTTTAAACAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTGGCAACAGAGGTTCCTaGAATGTCCACGATGTCACC +
Preference number: 4 (lower is better)
Translates to: ISTLNKHMHHGKREVVQVGNRGS*NVHDVT
Trigger: GGTGACATCGTGGACATTCCAGGAACCTCTGTTGCC...AACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTGTTTAAAGTGGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp ATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTAGCCTTTTGTAGTGGAAGTCTTTaGACATGTCTATGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: MHHGKREVVQVFLWFLAFCSGSL*TCLWEP
Trigger: AGGCTCCCATAGACATGTCCAAAGACTTCCACTACA...AAAGGCTAGAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp ACAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCCATTCTCCAAGCTTCTaGATGGGTTTCCCCTTTCTA +
Preference number: 4 (lower is better)
Translates to: TSICTMGRERLSRFSSGFHSPSF*MGFPFL
Trigger: TAGAAAGGGGAAACCCATCCAGAAGCTTGGAGAATG...GAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp ATATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATGGTACAACTTCTCACTaGATGACACATGCCGGTGAC +
Preference number: 4 (lower is better)
Translates to: ICTIGSSPFSASESDQHNGTTSH*MTHAGD
Trigger: GTCACCGGCATGTGTCATCCAGTGAGAAGTTGTACC...ATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAATTGTGCATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp ACAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCGATTCCAGGAAGTTCTaGGAGTTTAGGCCAATCATG +
Preference number: 4 (lower is better)
Translates to: TSICTMGRERLSRFSSGFDSRKF*EFRPIM
Trigger: CATGATTGGCCTAAACTCCCAGAACTTCCTGGAATC...GAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp ATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTAGCCTTTGTCAGGATGTTCATATaGCAACCAGTGGTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: MHHGKREVVQVFLWFLAFVRMFI*QPVVFG
Trigger: ACCAAACACCACTGGTTGCCATATGAACATCCTGAC...AAAGGCTAGAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp ATATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATTTCACGGTTCGGCAGTaGGAATTATCTCCTCCACAG +
Preference number: 4 (lower is better)
Translates to: ICTIGSSPFSASESDQHNFTVRQ*ELSPPQ
Trigger: CTGTGGAGGAGATAATTCCCACTGCCGAACCGTGAA...ATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAATTGTGCATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp CAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTGAAGCCTCGTCTTCTTaGATTAACACATGTCTAGCC +
Preference number: 4 (lower is better)
Translates to: QAYAPWEERGCPGFPLVSEASSS*INTCLA
Trigger: GGCTAGACATGTGTTAATCCAAGAAGACGAGGCTTC...AGAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp ATTTCCACTTTAAACAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTCTCCACCACAGGGTTTaGAACACTGAGACCAGCTCT +
Preference number: 4 (lower is better)
Translates to: ISTLNKHMHHGKREVVQVLHHRV*NTETSS
Trigger: AGAGCTGGTCTCAGTGTTCCAAACCCTGTGGTGGAG...AACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTGTTTAAAGTGGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp ATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTAGCCTTTCCATATTTAGTGTACTaGAAACCTCCACCACAGGGT +
Preference number: 4 (lower is better)
Translates to: MHHGKREVVQVFLWFLAFPYLVY*KPPPQG
Trigger: ACCCTGTGGTGGAGGTTTCCAGTACACTAAATATGG...AAAGGCTAGAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp ACAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCCCATATTTAGTGTACTaGAAACCTCCACCACAGGGT +
Preference number: 4 (lower is better)
Translates to: TSICTMGRERLSRFSSGFPYLVY*KPPPQG
Trigger: ACCCTGTGGTGGAGGTTTCCAGTACACTAAATATGG...GAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp CAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCATGTGCACAGAGCGGTTaGTGCCATCAAGGAGTGGCT +
Preference number: 4 (lower is better)
Translates to: QTKSQLICTIGSSPFSASCAQSG*CHQGVA
Trigger: AGCCACTCCTTGATGGCACCAACCGCTCTGTGCACA...TGAAGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp ATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTAGCCTTTTGCCTACTGAGGTCCTaGAAAGAGGGTTTCAGTTTT +
Preference number: 4 (lower is better)
Translates to: MHHGKREVVQVFLWFLAFCLLRS*KEGFSF
Trigger: AAAACTGAAACCCTCTTTCCAGGACCTCAGTAGGCA...AAAGGCTAGAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR TCA 90 bp ATATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATGCTGACCTCTTTTTGTaGCTCGCAGAAAGAGTATGG +
Preference number: 4 (lower is better)
Translates to: ICTIGSSPFSASESDQHNADLFL*LAERVW
Trigger: CCATACTCTTTCTGCGAGTCACAAAAAGAGGTCAGC...ATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAATTGTGCATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp CAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCACCAGGAGCTACTAGTTaGGTGTTGGGCTTTAGTCGC +
Preference number: 4 (lower is better)
Translates to: QTKSQLICTIGSSPFSASPGATS*VLGFSR
Trigger: GCGACTAAAGCCCAACACTCAACTAGTAGCTCCTGG...TGAAGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp ATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATCTTAGCAACAGCCTGTTCTACAGCTaGTCTCTTGTAGACAACATG +
Preference number: 4 (lower is better)
Translates to: IGSSPFSASESDQHNLSNSLFYS*SLVDNM
Trigger: CATGTTGTCTACAAGAGATCAGCTGTAGAACAGGCT...GTTGCTAAGATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp CAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTGAAAAACCATCCTCATaGTTCAGGGTACAACTTCTC +
Preference number: 4 (lower is better)
Translates to: QAYAPWEERGCPGFPLVSEKPSS*FRVQLL
Trigger: GAGAAGTTGTACCCTGAATCATGAGGATGGTTTTTC...AGAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp ATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTAGCCTTTAGTTTAGGCCAATCATaGTCAAAAGGGTCATCAAGG +
Preference number: 4 (lower is better)
Translates to: MHHGKREVVQVFLWFLAFSLGQS*SKGSSR
Trigger: CCTTGATGACCCTTTTGATCATGATTGGCCTAAACT...AAAGGCTAGAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp ATATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATGCCAAATTTAGTCCATaGCCCCCAATTGCCATCTTG +
Preference number: 4 (lower is better)
Translates to: ICTIGSSPFSASESDQHNAKFSP*PPIAIL
Trigger: CAAGATGGCAATTGGGGGTCATGGACTAAATTTGGC...ATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAATTGTGCATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp CAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTAAAGGTCCATCGGTGTaGAGACTTTCAATGTCATCT +
Preference number: 4 (lower is better)
Translates to: QAYAPWEERGCPGFPLVSKGPSV*RLSMSS
Trigger: AGATGACATTGAAAGTCTTCACACCGATGGACCTTT...AGAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp CAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTCAGAGTCTTCATGGATaGTGTACTTATATGTCAGGC +
Preference number: 4 (lower is better)
Translates to: QAYAPWEERGCPGFPLVSQSLHG*CTYMSG
Trigger: GCCTGACATATAAGTACATCATCCATGAAGACTCTG...AGAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp AAACAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTGCAGTTGACAGGCTCTaGCCGACTCAGGCTTTTCAC +
Preference number: 4 (lower is better)
Translates to: KQTKSQLICTIGSSPFSAAVDRL*PTQAFH
Trigger: GTGAAAAGCCTGAGTCGGTCAGAGCCTGTCAACTGC...AGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp ATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTAGCCTTTGTTTACTGTTTGGCCTaGAAGCAGCATATGCATTTG +
Preference number: 4 (lower is better)
Translates to: MHHGKREVVQVFLWFLAFVYCLA*KQHMHL
Trigger: CAAATGCATATGCTGCTTTCAGGCCAAACAGTAAAC...AAAGGCTAGAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp CAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCATTTGTGAAGCTGAACTaGGGTGGACCCTCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: QTKSQLICTIGSSPFSASFVKLN*GGPSWW
Trigger: CCACCAAGAGGGTCCACCTCAGTTCAGCTTCACAAA...TGAAGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp CAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTAGAAGAAGCACCTATTaGATCACTGGCTGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: QAYAPWEERGCPGFPLVSRRSTY*ITGCKE
Trigger: TTCTTTGCAGCCAGTGATTCAATAGGTGCTTCTTCT...AGAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp AAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTAGCCTTTTTGGTTCACTTTCGACATATGCTTTCTTaGACCTGCCTTCAAAGCCCC +
Preference number: 4 (lower is better)
Translates to: KREVVQVFLWFLAFLVHFRHMLS*TCLQSP
Trigger: GGGGCTTTGAAGGCAGGTTCAAGAAAGCATATGTCG...AAAGTGAACCAAAAAGGCTAGAAACCAGAGGAAAACCTGGACAACCTCTCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR GCA 90 bp AAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTAGCCTTTTTGGTTCACTTTTTTGGACGTGCTCTTTaGCATGGAAACGGACCACAG +
Preference number: 4 (lower is better)
Translates to: KREVVQVFLWFLAFLVHFFGRAL*HGNGPQ
Trigger: CTGTGGTCCGTTTCCATGGCAAAGAGCACGTCCAAA...AAAGTGAACCAAAAAGGCTAGAAACCAGAGGAAAACCTGGACAACCTCTCTCTT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR GCA 90 bp ATTTCCACTTTAAACAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTGTGGTAACGATGGAATaGTGCTTGTACCAAGGGAGC +
Preference number: 4 (lower is better)
Translates to: ISTLNKHMHHGKREVVQVVVTME*CLYQGS
Trigger: GCTCCCTTGGTACAAGCAGCATTCCATCGTTACCAC...AACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTGTTTAAAGTGGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR GCA 90 bp CAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTCTCCCACTGAAGAGATaGTACTCAAAGACATCTTCT +
Preference number: 4 (lower is better)
Translates to: QAYAPWEERGCPGFPLVSLPLKR*YSKTSS
Trigger: AGAAGATGTCTTTGAGTAGCATCTCTTCAGTGGGAG...AGAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR GCA 90 bp ATTTCCACTTTAAACAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTCACAGTCTTACTTCCTaGTTGCTGAGCACTCCTCTG +
Preference number: 4 (lower is better)
Translates to: ISTLNKHMHHGKREVVQVHSLTS*LLSTPL
Trigger: CAGAGGAGTGCTCAGCAAGCAGGAAGTAAGACTGTG...AACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTGTTTAAAGTGGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp AAACAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTACAACTGCTCAGGGTTaGAAGACACGTCCCTCGCTG +
Preference number: 4 (lower is better)
Translates to: KQTKSQLICTIGSSPFSATTAQG*KTRPSL
Trigger: CAGCGAGGGACGTGTCTTCCAACCCTGAGCAGTTGT...AGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp ATTTCCACTTTAAACAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTACGTGCTCTTTGCCATaGAAACGGACCACAGAGTCA +
Preference number: 4 (lower is better)
Translates to: ISTLNKHMHHGKREVVQVTCSLP*KRTTES
Trigger: TGACTCTGTGGTCCGTTTCCATGGCAAAGAGCACGT...AACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTGTTTAAAGTGGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp CAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCATCAGATCTTTGCTGTTaGGACGCCCAGCGACACACA +
Preference number: 4 (lower is better)
Translates to: QTKSQLICTIGSSPFSASSDLCC*DAQRHT
Trigger: TGTGTGTCGCTGGGCGTCCCAACAGCAAAGATCTGA...TGAAGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp ATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTAGCCTTTATCAGGTTTACTGTTTaGCCTGAAAGCAGCATATGC +
Preference number: 4 (lower is better)
Translates to: MHHGKREVVQVFLWFLAFIRFTV*PESSIC
Trigger: GCATATGCTGCTTTCAGGCCAAACAGTAAACCTGAT...AAAGGCTAGAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp CTTCAAAGCCCCAAAGCTCTACTATACTCAAATATCAATTCTAGACTGATGATAGGTGGGTGGGGAGGATaGTACGGTGACCAGTCTCAC +
Preference number: 4 (lower is better)
Translates to: LQSPKALLYSNINSRLMIGGWGG*YGDQSH
Trigger: GTGAGACTGGTCACCGTACCATCCTCCCCACCCACC...TATCATCAGTCTAGAATTGATATTTGAGTATAGTAGAGCTTTGGGGCTTTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp TATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATCCACCTATTGAATCACTaGCTGCAAAGAAGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: YAQLVPVPFLLQRATNTIHLLNH*LQRRKQ
Trigger: CTGCTTCCTTCTTTGCAGCCAGTGATTCAATAGGTG...GATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAATTGTGCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp TACGTGCTCTCAGTACAACAAACAGCATCAGTAGTGTACACTTTGATAAAAAGGTGCACTGGCGTGTTCTaGAACGAACACCAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: YVLSVQQTASVVYTLIKRCTGVF*NEHQFH
Trigger: GTGGAACTGGTGTTCGTTTCAGAACACGCCAGTGCA...CCTTTTTATCAAAGTGTACACTACTGATGCTGTTTGTTGTACTGAGAGCACGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR TCA 90 bp TACGTGCTCTCAGTACAACAAACAGCATCAGTAGTGTACACTTTGATAAAAAGGACACCAGGACAATCCTaGCCACCATTGATGGGCATG +
Preference number: 4 (lower is better)
Translates to: YVLSVQQTASVVYTLIKRTPGQS*PPLMGM
Trigger: CATGCCCATCAATGGTGGTCAGGATTGTCCTGGTGT...CCTTTTTATCAAAGTGTACACTACTGATGCTGTTTGTTGTACTGAGAGCACGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR TCA 90 bp ACAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTTAATAGCAAGAATATaGGGAGAAGCCTCGTCTTCT +
Preference number: 4 (lower is better)
Translates to: TSICTMGRERLSRFSSGFLIARI*GEASSS
Trigger: AGAAGACGAGGCTTCTCCTCATATTCTTGCTATTAA...GAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp AAACAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTCAGGGTTTGGAACACTaGGACCAGCTCTTCAAAGCC +
Preference number: 4 (lower is better)
Translates to: KQTKSQLICTIGSSPFSAQGLEH*DQLFKA
Trigger: GGCTTTGAAGAGCTGGTCTCAGTGTTCCAAACCCTG...AGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp ATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTAGCCTTTGGATGTGTACACTCTTaGATATTGCACATTCGTCTA +
Preference number: 4 (lower is better)
Translates to: MHHGKREVVQVFLWFLAFGCVHS*ILHIRL
Trigger: TAGACGAATGTGCAATATTCAAGAGTGTACACATCC...AAAGGCTAGAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp TATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATCGCCAACACTTCCATTTaGCAGAATATGGACTTGTCT +
Preference number: 4 (lower is better)
Translates to: YAQLVPVPFLLQRATNTIANTSI*QNMDLS
Trigger: AGACAAGTCCATATTCTGTCAAATGGAAGTGTTGGC...GATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAATTGTGCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp ATATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATCTTTGCAGGGGTCTCTaGATGATAAGGAACCAAAGA +
Preference number: 4 (lower is better)
Translates to: ICTIGSSPFSASESDQHNLCRGL*MIRNQR
Trigger: TCTTTGGTTCCTTATCATTCAGAGACCCCTGCAAAG...ATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAATTGTGCATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp ATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATCTTAGCAACTTTGAGGTTCTTGCCTaGGAAGAAGCACCTATTGAA +
Preference number: 4 (lower is better)
Translates to: IGSSPFSASESDQHNLSNFEVLA*EEAPIE
Trigger: TTCAATAGGTGCTTCTTCTCAGGCAAGAACCTCAAA...GTTGCTAAGATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp ATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATCTTAGCAACAGACAGCTCAGGTACTaGCCTCAAAATCATTATGCT +
Preference number: 4 (lower is better)
Translates to: IGSSPFSASESDQHNLSNRQLRY*PQNHYA
Trigger: AGCATAATGATTTTGAGGTCAGTACCTGAGCTGTCT...GTTGCTAAGATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR GCA 90 bp ATATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATAGGACCACATTTATATaGACTCCGAGGGACTCATCA +
Preference number: 4 (lower is better)
Translates to: ICTIGSSPFSASESDQHNRTTFI*TPRDSS
Trigger: TGATGAGTCCCTCGGAGTGCATATAAATGTGGTCCT...ATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAATTGTGCATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR GCA 90 bp CAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCATTGAGATCAGATCTTTaGTGTTGGGACGCCCAGCGA +
Preference number: 4 (lower is better)
Translates to: QTKSQLICTIGSSPFSASLRSDL*CWDAQR
Trigger: TCGCTGGGCGTCCCAACAGCAAAGATCTGATCTCAA...TGAAGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR GCA 90 bp GCACGAGTTCATTATTTACTATTCGTTGATCCCTGTGACCACAAGTGTACTAAGCTGCTGACACTGCTGTaGTCTGAAGTCCTCAAAGTG +
Preference number: 4 (lower is better)
Translates to: ARVHYLLFVDPCDHKCTKLLTLL*SEVLKV
Trigger: CACTTTGAGGACTTCAGAGCACAGCAGTGTCAGCAG...CTTAGTACACTTGTGGTCACAGGGATCAACGAATAGTAAATAATGAACTCGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR GCA 90 bp ATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATCTTAGCAACTGGCCTCACAGAAGCTaGGATGGACCATTTTATTAT +
Preference number: 4 (lower is better)
Translates to: IGSSPFSASESDQHNLSNWPHRS*DGPFYY
Trigger: ATAATAAAATGGTCCATCGCAGCTTCTGTGAGGCCA...GTTGCTAAGATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR GCA 90 bp ATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATCTTAGCAACCTCCCACTGAAGAGATaGTACTCAAAGACATCTTCT +
Preference number: 4 (lower is better)
Translates to: IGSSPFSASESDQHNLSNLPLKR*YSKTSS
Trigger: AGAAGATGTCTTTGAGTAGCATCTCTTCAGTGGGAG...GTTGCTAAGATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp TATTTACTATTCGTTGATCCCTGTGACCACAAGTGTACTAAGACACCAATCCTTTCAGATCTTTGCTGTTaGGACGCCCAGCGACACACA +
Preference number: 4 (lower is better)
Translates to: YLLFVDPCDHKCTKTPILSDLCC*DAQRHT
Trigger: TGTGTGTCGCTGGGCGTCCCAACAGCAAAGATCTGA...AAGGATTGGTGTCTTAGTACACTTGTGGTCACAGGGATCAACGAATAGTAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR CCA 90 bp CAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTAAAATTGCATGGTCATaGTGTTCAGAGTGGTTGAGA +
Preference number: 4 (lower is better)
Translates to: QAYAPWEERGCPGFPLVSKIAWS*CSEWLR
Trigger: TCTCAACCACTCTGAACACCATGACCATGCAATTTT...AGAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp CAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTTCATATGGCAACCAGTaGTGTTTGGTATTCTGGTAT +
Preference number: 4 (lower is better)
Translates to: QAYAPWEERGCPGFPLVSSYGNQ*CLVFWY
Trigger: ATACCAGAATACCAAACACCACTGGTTGCCATATGA...AGAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp ATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTAGCCTTTTCATATGGCAACCAGTaGTGTTTGGTATTCTGGTAT +
Preference number: 4 (lower is better)
Translates to: MHHGKREVVQVFLWFLAFSYGNQ*CLVFWY
Trigger: ATACCAGAATACCAAACACCACTGGTTGCCATATGA...AAAGGCTAGAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp ATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATCTTAGCAACAACTTCCACAGGTTTTaGTGCAGTGTTCCCATTCTT +
Preference number: 4 (lower is better)
Translates to: IGSSPFSASESDQHNLSNNFHRF*CSVPIL
Trigger: AAGAATGGGAACACTGCACCAAAACCTGTGGAAGTT...GTTGCTAAGATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp TATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATCCTTGTCTCCCAAACATaGTTCATCATTACAAGGAGG +
Preference number: 4 (lower is better)
Translates to: YAQLVPVPFLLQRATNTILVSQT*FIITRR
Trigger: CCTCCTTGTAATGATGAACCATGTTTGGGAGACAAG...GATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAATTGTGCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp TATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATCTGTTATAACCTGGTATaGAGCAGTATCGTGCCAACA +
Preference number: 4 (lower is better)
Translates to: YAQLVPVPFLLQRATNTICYNLV*SSIVPT
Trigger: TGTTGGCACGATACTGCTCCATACCAGGTTATAACA...GATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAATTGTGCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp ATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATCTTAGCAACTGTTATAACCTGGTATaGAGCAGTATCGTGCCAACA +
Preference number: 4 (lower is better)
Translates to: IGSSPFSASESDQHNLSNCYNLV*SSIVPT
Trigger: TGTTGGCACGATACTGCTCCATACCAGGTTATAACA...GTTGCTAAGATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp ATTTCCACTTTAAACAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTGGAGAGAGCATTTCTaGCTTTGCTGTGAGCAAGGT +
Preference number: 4 (lower is better)
Translates to: ISTLNKHMHHGKREVVQVWREHF*LCCEQG
Trigger: ACCTTGCTCACAGCAAAGCCAGAAATGCTCTCTCCA...AACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTGTTTAAAGTGGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR TCA 90 bp AAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTAGCCTTTTTGGTTCACTTTAATGAAAATGAAATTTaGGCTCTGAGACTGGCCCCC +
Preference number: 4 (lower is better)
Translates to: KREVVQVFLWFLAFLVHFNENEI*ALRLAP
Trigger: GGGGGCCAGTCTCAGAGCTCAAATTTCATTTTCATT...AAAGTGAACCAAAAAGGCTAGAAACCAGAGGAAAACCTGGACAACCTCTCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR TCA 90 bp AAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTAGCCTTTTTGGTTCACTTTGGTGTTCAGAGTGGTTaGGATCAGATCTTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: KREVVQVFLWFLAFLVHFGVQSG*DQIFAV
Trigger: AACAGCAAAGATCTGATCTCAACCACTCTGAACACC...AAAGTGAACCAAAAAGGCTAGAAACCAGAGGAAAACCTGGACAACCTCTCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp TATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATCCCATCTTGTTTTTGCTaGTTAGCATTCTTCCACATG +
Preference number: 4 (lower is better)
Translates to: YAQLVPVPFLLQRATNTIPSCFC*LAFFHM
Trigger: CATGTGGAAGAATGCTAATCAGCAAAAACAAGATGG...GATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAATTGTGCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp ATATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATAAAGGTCCATCGGTGTaGAGACTTTCAATGTCATCT +
Preference number: 4 (lower is better)
Translates to: ICTIGSSPFSASESDQHNKGPSV*RLSMSS
Trigger: AGATGACATTGAAAGTCTTCACACCGATGGACCTTT...ATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAATTGTGCATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp ATATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATCTTTCCATCTTTCTTTaGGGTTCTTGCCTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: ICTIGSSPFSASESDQHNLSIFL*GSCLRR
Trigger: TCTTCTCAGGCAAGAACCTCAAAGAAAGATGGAAAG...ATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAATTGTGCATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp CAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTGGTGATTTCTTCCAATaGATTCTGGTAAATGAGTCA +
Preference number: 4 (lower is better)
Translates to: QAYAPWEERGCPGFPLVSGDFFQ*ILVNES
Trigger: TGACTCATTTACCAGAATTCATTGGAAGAAATCACC...AGAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp ATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTAGCCTTTGAGCAAGGTGACTACTaGCATAAATTATTAGCACAT +
Preference number: 4 (lower is better)
Translates to: MHHGKREVVQVFLWFLAFEQGDY*HKLLAH
Trigger: ATGTGCTAATAATTTATGTCAGTAGTCACCTTGCTC...AAAGGCTAGAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR TCA 90 bp CAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTTTCAGTTTTAGCTTTTaGGTTGGCTGTAGTAGTTTG +
Preference number: 4 (lower is better)
Translates to: QAYAPWEERGCPGFPLVSFSFSF*VGCSSL
Trigger: CAAACTACTACAGCCAACTCAAAAGCTAAAACTGAA...AGAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR TCA 90 bp CAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAATCTTCCCCTGTGGATaGGATGTATGCACACACAAG +
Preference number: 4 (lower is better)
Translates to: QTKSQLICTIGSSPFSASIFPCG*DVCTHK
Trigger: CTTGTGTGTGCATACATCTCATCCACAGGGGAAGAT...TGAAGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR GCA 90 bp AAAGACTTAAGGCTTAGGGATTGTTTTACTATCTGGAATTTGCCTAATTTGACCACTGGGCAAAGCAAATaGCCAGAGCAAACCCACCCC +
Preference number: 4 (lower is better)
Translates to: KDLRLRDCFTIWNLPNLTTGQSK*PEQTHP
Trigger: GGGGTGGGTTTGCTCTGGGCATTTGCTTTGCCCAGT...GGTCAAATTAGGCAAATTCCAGATAGTAAAACAATCCCTAAGCCTTAAGTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR GCA 90 bp AAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTAGCCTTTTTGGTTCACTTTGCTGCTGGTGGATGTTaGCATAAACAGTACCTAGAT +
Preference number: 4 (lower is better)
Translates to: KREVVQVFLWFLAFLVHFAAGGC*HKQYLD
Trigger: ATCTAGGTACTGTTTATGGCAACATCCACCAGCAGC...AAAGTGAACCAAAAAGGCTAGAAACCAGAGGAAAACCTGGACAACCTCTCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR GCA 90 bp TACTATTCGTTGATCCCTGTGACCACAAGTGTACTAAGACACCAATCCTTTAAATTGAGATCAGATCTTTaGTGTTGGGACGCCCAGCGA +
Preference number: 4 (lower is better)
Translates to: YYSLIPVTTSVLRHQSFKLRSDL*CWDAQR
Trigger: TCGCTGGGCGTCCCAACAGCAAAGATCTGATCTCAA...TTTAAAGGATTGGTGTCTTAGTACACTTGTGGTCACAGGGATCAACGAATAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR GCA 90 bp TACTATTCGTTGATCCCTGTGACCACAAGTGTACTAAGACACCAATCCTTTAAAGTGGTAACGATGGAATaGTGCTTGTACCAAGGGAGC +
Preference number: 4 (lower is better)
Translates to: YYSLIPVTTSVLRHQSFKVVTME*CLYQGS
Trigger: GCTCCCTTGGTACAAGCAGCATTCCATCGTTACCAC...TTTAAAGGATTGGTGTCTTAGTACACTTGTGGTCACAGGGATCAACGAATAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR GCA 90 bp TACTATTCGTTGATCCCTGTGACCACAAGTGTACTAAGACACCAATCCTTTAAATCAGTTCTTGACCACTaGATCGGGACCAGTGGTAAC +
Preference number: 4 (lower is better)
Translates to: YYSLIPVTTSVLRHQSFKSVLDH*IGTSGN
Trigger: GTTACCACTGGTCCCGATGCAGTGGTCAAGAACTGA...TTTAAAGGATTGGTGTCTTAGTACACTTGTGGTCACAGGGATCAACGAATAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR GCA 90 bp GCACGAGTTCATTATTTACTATTCGTTGATCCCTGTGACCACAAGTGTACTAAGAGGTTCGGAACGCGGTaGACATTTTATAGCCAACAC +
Preference number: 4 (lower is better)
Translates to: ARVHYLLFVDPCDHKCTKRFGTR*TFYSQH
Trigger: GTGTTGGCTATAAAATGTGCACCGCGTTCCGAACCT...CTTAGTACACTTGTGGTCACAGGGATCAACGAATAGTAAATAATGAACTCGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR GCA 90 bp TATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATCCTCCTCGCACACATATaGTATATGGATCTTTGTAAG +
Preference number: 4 (lower is better)
Translates to: YAQLVPVPFLLQRATNTILLAHI*YMDLCK
Trigger: CTTACAAAGATCCATATAGCATATGTGTGCGAGGAG...GATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAATTGTGCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR GCA 90 bp CTTCAAAGCCCCAAAGCTCTACTATACTCAAATATCAATTCTAGACTGATGATACGGGACGGTCACCCATaGAGTATTTGCTGTGCACAG +
Preference number: 4 (lower is better)
Translates to: LQSPKALLYSNINSRLMIRDGHP*SICCAQ
Trigger: CTGTGCACAGCAAATACTGCATGGGTGACCGTCCCG...TATCATCAGTCTAGAATTGATATTTGAGTATAGTAGAGCTTTGGGGCTTTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR GCA 90 bp TATTTACTATTCGTTGATCCCTGTGACCACAAGTGTACTAAGACACCAATCCTTCACAGTCTTACTTCCTaGTTGCTGAGCACTCCTCTG +
Preference number: 4 (lower is better)
Translates to: YLLFVDPCDHKCTKTPILHSLTS*LLSTPL
Trigger: CAGAGGAGTGCTCAGCAAGCAGGAAGTAAGACTGTG...AAGGATTGGTGTCTTAGTACACTTGTGGTCACAGGGATCAACGAATAGTAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR CCA 90 bp GAAAGAGGGTTTCAGTTTTGTCTTGCACGAGTTCATTATTTACTATTCGTTGATACAACTGCTCAGGGTTaGAAGACACGTCCCTCGCTG +
Preference number: 4 (lower is better)
Translates to: ERGFQFCLARVHYLLFVDTTAQG*KTRPSL
Trigger: CAGCGAGGGACGTGTCTTCCAACCCTGAGCAGTTGT...ATCAACGAATAGTAAATAATGAACTCGTGCAAGACAAAACTGAAACCCTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR CCA 90 bp ATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATCTTAGCAACAAAATTGCATGGTCATaGTGTTCAGAGTGGTTGAGA +
Preference number: 4 (lower is better)
Translates to: IGSSPFSASESDQHNLSNKIAWS*CSEWLR
Trigger: TCTCAACCACTCTGAACACCATGACCATGCAATTTT...GTTGCTAAGATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp TATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATCGCAACCAGTGGTGTTTaGTATTCTGGTATTCAAAGT +
Preference number: 4 (lower is better)
Translates to: YAQLVPVPFLLQRATNTIATSGV*YSGIQS
Trigger: ACTTTGAATACCAGAATACCAAACACCACTGGTTGC...GATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAATTGTGCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp CAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTGTATCTAATTCTTCCTaGATGACATTGTTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: QAYAPWEERGCPGFPLVSVSNSS*MTLLLL
Trigger: CAACAGCAACAATGTCATCCAGGAAGAATTAGATAC...AGAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp ATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTAGCCTTTGTATCTAATTCTTCCTaGATGACATTGTTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: MHHGKREVVQVFLWFLAFVSNSS*MTLLLL
Trigger: CAACAGCAACAATGTCATCCAGGAAGAATTAGATAC...AAAGGCTAGAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp CAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAGTTTCGGCTTTTTGTTaGCCTCACAGAAGCTGCGAT +
Preference number: 4 (lower is better)
Translates to: QTKSQLICTIGSSPFSASVSAFC*PHRSCD
Trigger: ATCGCAGCTTCTGTGAGGCCAACAAAAAGCCGAAAC...TGAAGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp ATATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATAACTTCCACAGGTTTTaGTGCAGTGTTCCCATTCTT +
Preference number: 4 (lower is better)
Translates to: ICTIGSSPFSASESDQHNNFHRF*CSVPIL
Trigger: AAGAATGGGAACACTGCACCAAAACCTGTGGAAGTT...ATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAATTGTGCATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp ATTTCCACTTTAAACAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTCTCATCTTTCTAAGGTaGATGATCTTGTCGGACGTC +
Preference number: 4 (lower is better)
Translates to: ISTLNKHMHHGKREVVQVLIFLR*MILSDV
Trigger: GACGTCCGACAAGATCATCCACCTTAGAAAGATGAG...AACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTGTTTAAAGTGGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp TATTTACTATTCGTTGATCCCTGTGACCACAAGTGTACTAAGACACCAATCCTTCTTCTAGATTTGTGCTaGCTGGAGTCACCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: YLLFVDPCDHKCTKTPILLLDLC*LESPAH
Trigger: ATGAGCTGGTGACTCCAGTCAGCACAAATCTAGAAG...AAGGATTGGTGTCTTAGTACACTTGTGGTCACAGGGATCAACGAATAGTAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR TCA 90 bp CAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAGACACTGCTGTGCTCTaGAGTCCTCAAAGTGTTTTT +
Preference number: 4 (lower is better)
Translates to: QTKSQLICTIGSSPFSASDTAVL*SPQSVF
Trigger: AAAAACACTTTGAGGACTTCAGAGCACAGCAGTGTC...TGAAGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp ATATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATTTAATAGCAAGAATATaGGGAGAAGCCTCGTCTTCT +
Preference number: 4 (lower is better)
Translates to: ICTIGSSPFSASESDQHNLIARI*GEASSS
Trigger: AGAAGACGAGGCTTCTCCTCATATTCTTGCTATTAA...ATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAATTGTGCATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp AAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTAGCCTTTTTGGTTCACTTTTTTGAGGTTCTTGCCTaGGAAGAAGCACCTATTGAA +
Preference number: 4 (lower is better)
Translates to: KREVVQVFLWFLAFLVHFFEVLA*EEAPIE
Trigger: TTCAATAGGTGCTTCTTCTCAGGCAAGAACCTCAAA...AAAGTGAACCAAAAAGGCTAGAAACCAGAGGAAAACCTGGACAACCTCTCTCTT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp AAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTAGCCTTTTTGGTTCACTTTCTTTCCATCTTTCTTTaGGGTTCTTGCCTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: KREVVQVFLWFLAFLVHFLSIFL*GSCLRR
Trigger: TCTTCTCAGGCAAGAACCTCAAAGAAAGATGGAAAG...AAAGTGAACCAAAAAGGCTAGAAACCAGAGGAAAACCTGGACAACCTCTCTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp ATATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATGATGCATTGTGGTTGTaGACATTTGAACATGAACCA +
Preference number: 4 (lower is better)
Translates to: ICTIGSSPFSASESDQHNDALWL*TFEHEP
Trigger: TGGTTCATGTTCAAATGTTCACAACCACAATGCATC...ATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAATTGTGCATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR GCA 90 bp TACGTGCTCTCAGTACAACAAACAGCATCAGTAGTGTACACTTTGATAAAAAGGGTAACGATGGAATGCTaGTTGTACCAAGGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: YVLSVQQTASVVYTLIKRVTMEC*LYQGSH
Trigger: ATGGCTCCCTTGGTACAAGCAGCATTCCATCGTTAC...CCTTTTTATCAAAGTGTACACTACTGATGCTGTTTGTTGTACTGAGAGCACGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR GCA 90 bp AAACAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTAGGTTCGGAACGCGGTaGACATTTTATAGCCAACAC +
Preference number: 4 (lower is better)
Translates to: KQTKSQLICTIGSSPFSARFGTR*TFYSQH
Trigger: GTGTTGGCTATAAAATGTGCACCGCGTTCCGAACCT...AGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR GCA 90 bp AAACAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTGTGTTCCCATTCTTCTaGTACCCAGAGTGGATGTGT +
Preference number: 4 (lower is better)
Translates to: KQTKSQLICTIGSSPFSAVFPFF*YPEWMC
Trigger: ACACATCCACTCTGGGTAGCAGAAGAATGGGAACAC...AGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR GCA 90 bp AAAGACTTAAGGCTTAGGGATTGTTTTACTATCTGGAATTTGCCTAATTTGACCCACCCATGCAGTATTTaGTGTGCACAGAGCGGTTGG +
Preference number: 4 (lower is better)
Translates to: KDLRLRDCFTIWNLPNLTHPCSI*CAQSGW
Trigger: CCAACCGCTCTGTGCACAGCAAATACTGCATGGGTG...GGTCAAATTAGGCAAATTCCAGATAGTAAAACAATCCCTAAGCCTTAAGTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR GCA 90 bp ATTTCCACTTTAAACAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTATGGAGCAGTATCGTaGCAACACTTCCATTTGACA +
Preference number: 4 (lower is better)
Translates to: ISTLNKHMHHGKREVVQVYGAVS*QHFHLT
Trigger: TGTCAAATGGAAGTGTTGGCACGATACTGCTCCATA...AACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTGTTTAAAGTGGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR GCA 90 bp CTTCAAAGCCCCAAAGCTCTACTATACTCAAATATCAATTCTAGACTGATGATAGGGTGCTACTGCGCTTaGTGCAGGACTCACAACATA +
Preference number: 4 (lower is better)
Translates to: LQSPKALLYSNINSRLMIGCYCA*CRTHNI
Trigger: TATGTTGTGAGTCCTGCAGCAAGCGCAGTAGCACCC...TATCATCAGTCTAGAATTGATATTTGAGTATAGTAGAGCTTTGGGGCTTTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR GCA 90 bp ATTTCCACTTTAAACAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTAAAAGTCAGCTGATATaGACAATTGGTTCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: ISTLNKHMHHGKREVVQVKSQLI*TIGSSP
Trigger: GGGACTGGAACCAATTGTGCATATCAGCTGACTTTT...AACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTGTTTAAAGTGGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR GCA 90 bp ATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTAGCCTTTATTTTTATTGGTACGTaGTCTCAGTACAACAAACAG +
Preference number: 4 (lower is better)
Translates to: MHHGKREVVQVFLWFLAFIFIGT*SQYNKQ
Trigger: CTGTTTGTTGTACTGAGAGCACGTACCAATAAAAAT...AAAGGCTAGAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR CCA 90 bp AAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTAGCCTTTTTGGTTCACTTTATACGTAGCACTTCCTaGTTGATGGTTGTTAATGGG +
Preference number: 4 (lower is better)
Translates to: KREVVQVFLWFLAFLVHFIRSTS*LMVVNG
Trigger: CCCATTAACAACCATCAACCAGGAAGTGCTACGTAT...AAAGTGAACCAAAAAGGCTAGAAACCAGAGGAAAACCTGGACAACCTCTCTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp CTTCAAAGCCCCAAAGCTCTACTATACTCAAATATCAATTCTAGACTGATGATAGGCAACAGAGGTTCCTaGAATGTCCACGATGTCACC +
Preference number: 4 (lower is better)
Translates to: LQSPKALLYSNINSRLMIGNRGS*NVHDVT
Trigger: GGTGACATCGTGGACATTCCAGGAACCTCTGTTGCC...TATCATCAGTCTAGAATTGATATTTGAGTATAGTAGAGCTTTGGGGCTTTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp CAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCATGTAGTGGAAGTCTTTaGACATGTCTATGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: QTKSQLICTIGSSPFSASCSGSL*TCLWEP
Trigger: AGGCTCCCATAGACATGTCCAAAGACTTCCACTACA...TGAAGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp CAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCACATTCTCCAAGCTTCTaGATGGGTTTCCCCTTTCTA +
Preference number: 4 (lower is better)
Translates to: QTKSQLICTIGSSPFSASHSPSF*MGFPFL
Trigger: TAGAAAGGGGAAACCCATCCAGAAGCTTGGAGAATG...TGAAGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp CAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAACATGGCCCGTTTCATaGGCTACTACAAAAGCAGAT +
Preference number: 4 (lower is better)
Translates to: QTKSQLICTIGSSPFSASTWPVS*ATTKAD
Trigger: ATCTGCTTTTGTAGTAGCCCATGAAACGGGCCATGT...TGAAGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp AAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTAGCCTTTTTGGTTCACTTTTTCAGTCCCATCAAGTaGAGGTCCCTTTTTAGTCTT +
Preference number: 4 (lower is better)
Translates to: KREVVQVFLWFLAFLVHFFSPIK*RSLFSL
Trigger: AAGACTAAAAAGGGACCTCCACTTGATGGGACTGAA...AAAGTGAACCAAAAAGGCTAGAAACCAGAGGAAAACCTGGACAACCTCTCTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp ATTTCCACTTTAAACAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTATGGGATTATTGCACTaGCGTGTTCTGAAACGAACA +
Preference number: 4 (lower is better)
Translates to: ISTLNKHMHHGKREVVQVMGLLH*RVLKRT
Trigger: TGTTCGTTTCAGAACACGCCAGTGCAATAATCCCAT...AACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTGTTTAAAGTGGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp CAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAGTCAGGATGTTCATATaGCAACCAGTGGTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: QTKSQLICTIGSSPFSASVRMFI*QPVVFG
Trigger: ACCAAACACCACTGGTTGCCATATGAACATCCTGAC...TGAAGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp CTTCAAAGCCCCAAAGCTCTACTATACTCAAATATCAATTCTAGACTGATGATACTCCACCACAGGGTTTaGAACACTGAGACCAGCTCT +
Preference number: 4 (lower is better)
Translates to: LQSPKALLYSNINSRLMILHHRV*NTETSS
Trigger: AGAGCTGGTCTCAGTGTTCCAAACCCTGTGGTGGAG...TATCATCAGTCTAGAATTGATATTTGAGTATAGTAGAGCTTTGGGGCTTTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp TACGTGCTCTCAGTACAACAAACAGCATCAGTAGTGTACACTTTGATAAAAAGGGTTTCGGCTTTTTGTTaGCCTCACAGAAGCTGCGAT +
Preference number: 4 (lower is better)
Translates to: YVLSVQQTASVVYTLIKRVSAFC*PHRSCD
Trigger: ATCGCAGCTTCTGTGAGGCCAACAAAAAGCCGAAAC...CCTTTTTATCAAAGTGTACACTACTGATGCTGTTTGTTGTACTGAGAGCACGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR CCA 90 bp AAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTAGCCTTTTTGGTTCACTTTTTCTGCTACCCAGAGTaGATGTGTACACTCTTGAAT +
Preference number: 4 (lower is better)
Translates to: KREVVQVFLWFLAFLVHFFCYPE*MCTLLN
Trigger: ATTCAAGAGTGTACACATCCACTCTGGGTAGCAGAA...AAAGTGAACCAAAAAGGCTAGAAACCAGAGGAAAACCTGGACAACCTCTCTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp ATTTCCACTTTAAACAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTATCAGGTTTACTGTTTaGCCTGAAAGCAGCATATGC +
Preference number: 4 (lower is better)
Translates to: ISTLNKHMHHGKREVVQVIRFTV*PESSIC
Trigger: GCATATGCTGCTTTCAGGCCAAACAGTAAACCTGAT...AACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTGTTTAAAGTGGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp TACGTGCTCTCAGTACAACAAACAGCATCAGTAGTGTACACTTTGATAAAAAGGCAAGCATATGCACCATaGGAAGAGAGAGGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: YVLSVQQTASVVYTLIKRQAYAP*EERGCP
Trigger: TGGACAACCTCTCTCTTCCCATGGTGCATATGCTTG...CCTTTTTATCAAAGTGTACACTACTGATGCTGTTTGTTGTACTGAGAGCACGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286657.10
3UTR CAA 72 bp CTACTGAGGTCCTGGAAAGAGGGTTTCAGTTTTGTCTaGCACGAGTTCATTATTTACTATTCGTTGATCCCT +
Preference number: 4 (lower is better)
Translates to: LLRSWKEGFSFV*HEFIIYYSLIP
Trigger: AGGGATCAACGAATAGTAAATAATGAACTCGTGCAAGACAAAACTGAAACCCTCTTTCCAGGACCTCAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR TCA 90 bp GAAAGAGGGTTTCAGTTTTGTCTTGCACGAGTTCATTATTTACTATTCGTTGATAGCTTGTCCATCAGCTaGAGTCCTAACCTCTACCAG +
Preference number: 4 (lower is better)
Translates to: ERGFQFCLARVHYLLFVDSLSIS*SPNLYQ
Trigger: CTGGTAGAGGTTAGGACTTCAGCTGATGGACAAGCT...ATCAACGAATAGTAAATAATGAACTCGTGCAAGACAAAACTGAAACCCTCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR TCA 90 bp AAACAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTAGCCTGTTCTACAGCTaGTCTCTTGTAGACAACATG +
Preference number: 4 (lower is better)
Translates to: KQTKSQLICTIGSSPFSASLFYS*SLVDNM
Trigger: CATGTTGTCTACAAGAGATCAGCTGTAGAACAGGCT...AGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp AAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTAGCCTTTTTGGTTCACTTTCCATCTTGTTTTTGCTaGTTAGCATTCTTCCACATG +
Preference number: 4 (lower is better)
Translates to: KREVVQVFLWFLAFLVHFPSCFC*LAFFHM
Trigger: CATGTGGAAGAATGCTAATCAGCAAAAACAAGATGG...AAAGTGAACCAAAAAGGCTAGAAACCAGAGGAAAACCTGGACAACCTCTCTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp AAACAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTGACACTGCTGTGCTCTaGAGTCCTCAAAGTGTTTTT +
Preference number: 4 (lower is better)
Translates to: KQTKSQLICTIGSSPFSADTAVL*SPQSVF
Trigger: AAAAACACTTTGAGGACTTCAGAGCACAGCAGTGTC...AGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp GCACGAGTTCATTATTTACTATTCGTTGATCCCTGTGACCACAAGTGTACTAAGCAGAGTCTTCATGGATaGTGTACTTATATGTCAGGC +
Preference number: 4 (lower is better)
Translates to: ARVHYLLFVDPCDHKCTKQSLHG*CTYMSG
Trigger: GCCTGACATATAAGTACATCATCCATGAAGACTCTG...CTTAGTACACTTGTGGTCACAGGGATCAACGAATAGTAAATAATGAACTCGTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR TCA 90 bp AAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTAGCCTTTTTGGTTCACTTTGGATGTGTACACTCTTaGATATTGCACATTCGTCTA +
Preference number: 4 (lower is better)
Translates to: KREVVQVFLWFLAFLVHFGCVHS*ILHIRL
Trigger: TAGACGAATGTGCAATATTCAAGAGTGTACACATCC...AAAGTGAACCAAAAAGGCTAGAAACCAGAGGAAAACCTGGACAACCTCTCTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp TATTTACTATTCGTTGATCCCTGTGACCACAAGTGTACTAAGACACCAATCCTTATTTGGACCTCCCACTaGAGAGATGCTACTCAAAGA +
Preference number: 4 (lower is better)
Translates to: YLLFVDPCDHKCTKTPILIWTSH*RDATQR
Trigger: TCTTTGAGTAGCATCTCTTCAGTGGGAGGTCCAAAT...AAGGATTGGTGTCTTAGTACACTTGTGGTCACAGGGATCAACGAATAGTAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR TCA 90 bp AAAGACTTAAGGCTTAGGGATTGTTTTACTATCTGGAATTTGCCTAATTTGACCTTACTTCCTGCTTGCTaGGCACTCCTCTGGCGTAAA +
Preference number: 4 (lower is better)
Translates to: KDLRLRDCFTIWNLPNLTLLPAC*ALLWRK
Trigger: TTTACGCCAGAGGAGTGCTCAGCAAGCAGGAAGTAA...GGTCAAATTAGGCAAATTCCAGATAGTAAAACAATCCCTAAGCCTTAAGTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR TCA 90 bp AAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTAGCCTTTTTGGTTCACTTTGCACATTCTGTGCTTTaGGAGGTTAATTCATCTACA +
Preference number: 4 (lower is better)
Translates to: KREVVQVFLWFLAFLVHFAHSVL*EVNSST
Trigger: TGTAGATGAATTAACCTCTCAAAGCACAGAATGTGC...AAAGTGAACCAAAAAGGCTAGAAACCAGAGGAAAACCTGGACAACCTCTCTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR GCA 90 bp AAAGACTTAAGGCTTAGGGATTGTTTTACTATCTGGAATTTGCCTAATTTGACCTTTGGACGTGCTCTTTaGCATGGAAACGGACCACAG +
Preference number: 4 (lower is better)
Translates to: KDLRLRDCFTIWNLPNLTFGRAL*HGNGPQ
Trigger: CTGTGGTCCGTTTCCATGGCAAAGAGCACGTCCAAA...GGTCAAATTAGGCAAATTCCAGATAGTAAAACAATCCCTAAGCCTTAAGTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR GCA 90 bp CAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAAAAAGTCAGCTGATATaGACAATTGGTTCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: QTKSQLICTIGSSPFSASKSQLI*TIGSSP
Trigger: GGGACTGGAACCAATTGTGCATATCAGCTGACTTTT...TGAAGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR GCA 90 bp TATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATCTTATTAGCACATTATTaGAGTCAGATGCATTGTGGT +
Preference number: 4 (lower is better)
Translates to: YAQLVPVPFLLQRATNTILLAHY*SQMHCG
Trigger: ACCACAATGCATCTGACTGCAATAATGTGCTAATAA...GATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAATTGTGCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR CCA 90 bp CAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCACTACTAGTTGAGTGTTaGGCTTTAGTCGCAGATGAA +
Preference number: 4 (lower is better)
Translates to: QTKSQLICTIGSSPFSASLLVEC*ALVADE
Trigger: TTCATCTGCGACTAAAGCCCAACACTCAACTAGTAG...TGAAGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp CAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCATCATGGTGTTCAGAGTaGTTGAGATCAGATCTTTGC +
Preference number: 4 (lower is better)
Translates to: QTKSQLICTIGSSPFSASSWCSE*LRSDLC
Trigger: GCAAAGATCTGATCTCAACCACTCTGAACACCATGA...TGAAGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp TATTTACTATTCGTTGATCCCTGTGACCACAAGTGTACTAAGACACCAATCCTTGATTCCAGGAAGTTCTaGGAGTTTAGGCCAATCATG +
Preference number: 4 (lower is better)
Translates to: YLLFVDPCDHKCTKTPILDSRKF*EFRPIM
Trigger: CATGATTGGCCTAAACTCCCAGAACTTCCTGGAATC...AAGGATTGGTGTCTTAGTACACTTGTGGTCACAGGGATCAACGAATAGTAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR CCA 90 bp GAAAGAGGGTTTCAGTTTTGTCTTGCACGAGTTCATTATTTACTATTCGTTGATCCACAGCTGTTTACATaGGTCAAAGGTTCGGAACGC +
Preference number: 4 (lower is better)
Translates to: ERGFQFCLARVHYLLFVDPQLFT*VKGSER
Trigger: GCGTTCCGAACCTTTGACCCATGTAAACAGCTGTGG...ATCAACGAATAGTAAATAATGAACTCGTGCAAGACAAAACTGAAACCCTCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR CCA 90 bp CAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCATTCAGTCCCATCAAGTaGAGGTCCCTTTTTAGTCTT +
Preference number: 4 (lower is better)
Translates to: QTKSQLICTIGSSPFSASFSPIK*RSLFSL
Trigger: AAGACTAAAAAGGGACCTCCACTTGATGGGACTGAA...TGAAGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp ATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATCTTAGCAACCACACATATGCTATATaGATCTTTGTAAGAACAGTG +
Preference number: 4 (lower is better)
Translates to: IGSSPFSASESDQHNLSNHTYAI*IFVRTV
Trigger: CACTGTTCTTACAAAGATCCATATAGCATATGTGTG...GTTGCTAAGATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp AAAGACTTAAGGCTTAGGGATTGTTTTACTATCTGGAATTTGCCTAATTTGACCTTCACGGTTCGGCAGTaGGAATTATCTCCTCCACAG +
Preference number: 4 (lower is better)
Translates to: KDLRLRDCFTIWNLPNLTFTVRQ*ELSPPQ
Trigger: CTGTGGAGGAGATAATTCCCACTGCCGAACCGTGAA...GGTCAAATTAGGCAAATTCCAGATAGTAAAACAATCCCTAAGCCTTAAGTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR CCA 90 bp AAACAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTGAAGCCTCGTCTTCTTaGATTAACACATGTCTAGCC +
Preference number: 4 (lower is better)
Translates to: KQTKSQLICTIGSSPFSAEASSS*INTCLA
Trigger: GGCTAGACATGTGTTAATCCAAGAAGACGAGGCTTC...AGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp TACGTGCTCTCAGTACAACAAACAGCATCAGTAGTGTACACTTTGATAAAAAGGCACCTATTGAATCACTaGCTGCAAAGAAGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: YVLSVQQTASVVYTLIKRHLLNH*LQRRKQ
Trigger: CTGCTTCCTTCTTTGCAGCCAGTGATTCAATAGGTG...CCTTTTTATCAAAGTGTACACTACTGATGCTGTTTGTTGTACTGAGAGCACGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR CCA 90 bp AAACAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTCTCATCTTTCTAAGGTaGATGATCTTGTCGGACGTC +
Preference number: 4 (lower is better)
Translates to: KQTKSQLICTIGSSPFSALIFLR*MILSDV
Trigger: GACGTCCGACAAGATCATCCACCTTAGAAAGATGAG...AGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp TACTATTCGTTGATCCCTGTGACCACAAGTGTACTAAGACACCAATCCTTTAAAGCCAACACTTCCATTTaGCAGAATATGGACTTGTCT +
Preference number: 4 (lower is better)
Translates to: YYSLIPVTTSVLRHQSFKANTSI*QNMDLS
Trigger: AGACAAGTCCATATTCTGTCAAATGGAAGTGTTGGC...TTTAAAGGATTGGTGTCTTAGTACACTTGTGGTCACAGGGATCAACGAATAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR TCA 90 bp TATTTACTATTCGTTGATCCCTGTGACCACAAGTGTACTAAGACACCAATCCTTAGAAGAAGCACCTATTaGATCACTGGCTGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: YLLFVDPCDHKCTKTPILRRSTY*ITGCKE
Trigger: TTCTTTGCAGCCAGTGATTCAATAGGTGCTTCTTCT...AAGGATTGGTGTCTTAGTACACTTGTGGTCACAGGGATCAACGAATAGTAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR TCA 90 bp TACGTGCTCTCAGTACAACAAACAGCATCAGTAGTGTACACTTTGATAAAAAGGTGGAAACTGTTTGTGTaGCCATCTTTATCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: YVLSVQQTASVVYTLIKRWKLFV*PSLSSP
Trigger: AGGGGAAGATAAAGATGGTCACACAAACAGTTTCCA...CCTTTTTATCAAAGTGTACACTACTGATGCTGTTTGTTGTACTGAGAGCACGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR GCA 90 bp AAACAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTGAGGCTGATGGACTTTaGATATCCCAGCATTATCAT +
Preference number: 4 (lower is better)
Translates to: KQTKSQLICTIGSSPFSAEADGL*ISQHYH
Trigger: ATGATAATGCTGGGATATGCAAAGTCCATCAGCCTC...AGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR GCA 90 bp GAAAGAGGGTTTCAGTTTTGTCTTGCACGAGTTCATTATTTACTATTCGTTGATACTGGAGCATATCCTTaGATTCCAGCAGGTCCAAAG +
Preference number: 4 (lower is better)
Translates to: ERGFQFCLARVHYLLFVDTGAYP*IPAGPK
Trigger: CTTTGGACCTGCTGGAATGCAAGGATATGCTCCAGT...ATCAACGAATAGTAAATAATGAACTCGTGCAAGACAAAACTGAAACCCTCTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR GCA 90 bp CTTCAAAGCCCCAAAGCTCTACTATACTCAAATATCAATTCTAGACTGATGATAGTAACGATGGAATGCTaGTTGTACCAAGGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: LQSPKALLYSNINSRLMIVTMEC*LYQGSH
Trigger: ATGGCTCCCTTGGTACAAGCAGCATTCCATCGTTAC...TATCATCAGTCTAGAATTGATATTTGAGTATAGTAGAGCTTTGGGGCTTTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR GCA 90 bp CAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCATGGCTTCCTCCCCTTTaGCATTTAAAATATAATGGC +
Preference number: 4 (lower is better)
Translates to: QTKSQLICTIGSSPFSASWLPPL*HLKYNG
Trigger: GCCATTATATTTTAAATGGCAAAGGGGAGGAAGCCA...TGAAGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR GCA 90 bp CTTCAAAGCCCCAAAGCTCTACTATACTCAAATATCAATTCTAGACTGATGATATGCTACTGCGCTTGCTaGAGGACTCACAACATAACT +
Preference number: 4 (lower is better)
Translates to: LQSPKALLYSNINSRLMICYCAC*RTHNIT
Trigger: AGTTATGTTGTGAGTCCTGCAGCAAGCGCAGTAGCA...TATCATCAGTCTAGAATTGATATTTGAGTATAGTAGAGCTTTGGGGCTTTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR GCA 90 bp TACTATTCGTTGATCCCTGTGACCACAAGTGTACTAAGACACCAATCCTTTAAATCAACCATCGACATATaGTTTCTTGAACCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: YYSLIPVTTSVLRHQSFKSTIDI*FLEPAF
Trigger: GAAGGCAGGTTCAAGAAAGCATATGTCGATGGTTGA...TTTAAAGGATTGGTGTCTTAGTACACTTGTGGTCACAGGGATCAACGAATAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR GCA 90 bp AAAGACTTAAGGCTTAGGGATTGTTTTACTATCTGGAATTTGCCTAATTTGACCGAGCATTTCTGGCTTTaGTGTGAGCAAGGTGACTAC +
Preference number: 4 (lower is better)
Translates to: KDLRLRDCFTIWNLPNLTEHFWL*CEQGDY
Trigger: GTAGTCACCTTGCTCACAGCAAAGCCAGAAATGCTC...GGTCAAATTAGGCAAATTCCAGATAGTAAAACAATCCCTAAGCCTTAAGTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR CCA 90 bp GAAAGAGGGTTTCAGTTTTGTCTTGCACGAGTTCATTATTTACTATTCGTTGATCTTTGGACATGTCTATaGGAGCCTGTTCTACAGCTG +
Preference number: 4 (lower is better)
Translates to: ERGFQFCLARVHYLLFVDLWTCL*EPVLQL
Trigger: CAGCTGTAGAACAGGCTCCCATAGACATGTCCAAAG...ATCAACGAATAGTAAATAATGAACTCGTGCAAGACAAAACTGAAACCCTCTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR CCA 90 bp CTTCAAAGCCCCAAAGCTCTACTATACTCAAATATCAATTCTAGACTGATGATACTTTGGACATGTCTATaGGAGCCTGTTCTACAGCTG +
Preference number: 4 (lower is better)
Translates to: LQSPKALLYSNINSRLMILWTCL*EPVLQL
Trigger: CAGCTGTAGAACAGGCTCCCATAGACATGTCCAAAG...TATCATCAGTCTAGAATTGATATTTGAGTATAGTAGAGCTTTGGGGCTTTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp CTTCAAAGCCCCAAAGCTCTACTATACTCAAATATCAATTCTAGACTGATGATACTCCAAGCTTCTGGATaGGTTTCCCCTTTCTATGAG +
Preference number: 4 (lower is better)
Translates to: LQSPKALLYSNINSRLMILQASG*VSPFYE
Trigger: CTCATAGAAAGGGGAAACCCATCCAGAAGCTTGGAG...TATCATCAGTCTAGAATTGATATTTGAGTATAGTAGAGCTTTGGGGCTTTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp TATTTACTATTCGTTGATCCCTGTGACCACAAGTGTACTAAGACACCAATCCTTTCATGGTGTTCAGAGTaGTTGAGATCAGATCTTTGC +
Preference number: 4 (lower is better)
Translates to: YLLFVDPCDHKCTKTPILSWCSE*LRSDLC
Trigger: GCAAAGATCTGATCTCAACCACTCTGAACACCATGA...AAGGATTGGTGTCTTAGTACACTTGTGGTCACAGGGATCAACGAATAGTAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR CCA 90 bp AAACAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTCTTGTCTCCCAAACATaGTTCATCATTACAAGGAGG +
Preference number: 4 (lower is better)
Translates to: KQTKSQLICTIGSSPFSALVSQT*FIITRR
Trigger: CCTCCTTGTAATGATGAACCATGTTTGGGAGACAAG...AGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp TATTTACTATTCGTTGATCCCTGTGACCACAAGTGTACTAAGACACCAATCCTTTTTACATCTACTCCCTaGAGAGAGCATTTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: YLLFVDPCDHKCTKTPILFTSTP*REHFWL
Trigger: AAGCCAGAAATGCTCTCTCCAGGGAGTAGATGTAAA...AAGGATTGGTGTCTTAGTACACTTGTGGTCACAGGGATCAACGAATAGTAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR TCA 90 bp CTTCAAAGCCCCAAAGCTCTACTATACTCAAATATCAATTCTAGACTGATGATAGGTGTTCAGAGTGGTTaGGATCAGATCTTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: LQSPKALLYSNINSRLMIGVQSG*DQIFAV
Trigger: AACAGCAAAGATCTGATCTCAACCACTCTGAACACC...TATCATCAGTCTAGAATTGATATTTGAGTATAGTAGAGCTTTGGGGCTTTGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp CTTCAAAGCCCCAAAGCTCTACTATACTCAAATATCAATTCTAGACTGATGATACTTTGCAGGGGTCTCTaGATGATAAGGAACCAAAGA +
Preference number: 4 (lower is better)
Translates to: LQSPKALLYSNINSRLMILCRGL*MIRNQR
Trigger: TCTTTGGTTCCTTATCATTCAGAGACCCCTGCAAAG...TATCATCAGTCTAGAATTGATATTTGAGTATAGTAGAGCTTTGGGGCTTTGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR TCA 90 bp CAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAACAGATAAAATGAGCTaGCGATCTATAGAGATTTCC +
Preference number: 4 (lower is better)
Translates to: QTKSQLICTIGSSPFSASTDKMS*RSIEIS
Trigger: GGAAATCTCTATAGATCGTCAGCTCATTTTATCTGT...TGAAGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR GCA 90 bp AAACAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTCTCCTCGCACACATATaGTATATGGATCTTTGTAAG +
Preference number: 4 (lower is better)
Translates to: KQTKSQLICTIGSSPFSALLAHI*YMDLCK
Trigger: CTTACAAAGATCCATATAGCATATGTGTGCGAGGAG...AGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR GCA 90 bp AAACAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTTGGCTTCCTCCCCTTTaGCATTTAAAATATAATGGC +
Preference number: 4 (lower is better)
Translates to: KQTKSQLICTIGSSPFSAWLPPL*HLKYNG
Trigger: GCCATTATATTTTAAATGGCAAAGGGGAGGAAGCCA...AGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp CTTCAAAGCCCCAAAGCTCTACTATACTCAAATATCAATTCTAGACTGATGATAACATGGCCCGTTTCATaGGCTACTACAAAAGCAGAT +
Preference number: 4 (lower is better)
Translates to: LQSPKALLYSNINSRLMITWPVS*ATTKAD
Trigger: ATCTGCTTTTGTAGTAGCCCATGAAACGGGCCATGT...TATCATCAGTCTAGAATTGATATTTGAGTATAGTAGAGCTTTGGGGCTTTGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
3UTR CAA 72 bp AGTTTTGTCTTGCACGAGTTCATTATTTACTATTCGTaGATCCCTGTGACCACAAGTGTACTAAGACACCAA +
Preference number: 4 (lower is better)
Translates to: SFVLHEFIIYYS*IPVTTSVLRHQ
Trigger: TTGGTGTCTTAGTACACTTGTGGTCACAGGGATCAACGAATAGTAAATAATGAACTCGTGCAAGACAAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR TCA 90 bp GAAAGAGGGTTTCAGTTTTGTCTTGCACGAGTTCATTATTTACTATTCGTTGATAGTTTAGGCCAATCATaGTCAAAAGGGTCATCAAGG +
Preference number: 4 (lower is better)
Translates to: ERGFQFCLARVHYLLFVDSLGQS*SKGSSR
Trigger: CCTTGATGACCCTTTTGATCATGATTGGCCTAAACT...ATCAACGAATAGTAAATAATGAACTCGTGCAAGACAAAACTGAAACCCTCTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR TCA 90 bp AAAGACTTAAGGCTTAGGGATTGTTTTACTATCTGGAATTTGCCTAATTTGACCGTTTACTGTTTGGCCTaGAAGCAGCATATGCATTTG +
Preference number: 4 (lower is better)
Translates to: KDLRLRDCFTIWNLPNLTVYCLA*KQHMHL
Trigger: CAAATGCATATGCTGCTTTCAGGCCAAACAGTAAAC...GGTCAAATTAGGCAAATTCCAGATAGTAAAACAATCCCTAAGCCTTAAGTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR TCA 90 bp TACTATTCGTTGATCCCTGTGACCACAAGTGTACTAAGACACCAATCCTTTAAAGGTGATTTCTTCCAATaGATTCTGGTAAATGAGTCA +
Preference number: 4 (lower is better)
Translates to: YYSLIPVTTSVLRHQSFKGDFFQ*ILVNES
Trigger: TGACTCATTTACCAGAATTCATTGGAAGAAATCACC...TTTAAAGGATTGGTGTCTTAGTACACTTGTGGTCACAGGGATCAACGAATAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR TCA 90 bp TATTTACTATTCGTTGATCCCTGTGACCACAAGTGTACTAAGACACCAATCCTTAAACAAAAAGTCAGCTaGTATGCACAATTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: YLLFVDPCDHKCTKTPILKQKVS*YAQLVP
Trigger: TGGAACCAATTGTGCATATCAGCTGACTTTTTGTTT...AAGGATTGGTGTCTTAGTACACTTGTGGTCACAGGGATCAACGAATAGTAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR TCA 90 bp AAACAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTAAACAAAAAGTCAGCTaGTATGCACAATTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: KQTKSQLICTIGSSPFSAKQKVS*YAQLVP
Trigger: TGGAACCAATTGTGCATATCAGCTGACTTTTTGTTT...AGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR GCA 90 bp CTTCAAAGCCCCAAAGCTCTACTATACTCAAATATCAATTCTAGACTGATGATAGAGGCTGATGGACTTTaGATATCCCAGCATTATCAT +
Preference number: 4 (lower is better)
Translates to: LQSPKALLYSNINSRLMIEADGL*ISQHYH
Trigger: ATGATAATGCTGGGATATGCAAAGTCCATCAGCCTC...TATCATCAGTCTAGAATTGATATTTGAGTATAGTAGAGCTTTGGGGCTTTGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR GCA 90 bp AAAGACTTAAGGCTTAGGGATTGTTTTACTATCTGGAATTTGCCTAATTTGACCTGGCCTCACAGAAGCTaGGATGGACCATTTTATTAT +
Preference number: 4 (lower is better)
Translates to: KDLRLRDCFTIWNLPNLTWPHRS*DGPFYY
Trigger: ATAATAAAATGGTCCATCGCAGCTTCTGTGAGGCCA...GGTCAAATTAGGCAAATTCCAGATAGTAAAACAATCCCTAAGCCTTAAGTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR GCA 90 bp CTTCAAAGCCCCAAAGCTCTACTATACTCAAATATCAATTCTAGACTGATGATATATGGAGCAGTATCGTaGCAACACTTCCATTTGACA +
Preference number: 4 (lower is better)
Translates to: LQSPKALLYSNINSRLMIYGAVS*QHFHLT
Trigger: TGTCAAATGGAAGTGTTGGCACGATACTGCTCCATA...TATCATCAGTCTAGAATTGATATTTGAGTATAGTAGAGCTTTGGGGCTTTGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp CTTCAAAGCCCCAAAGCTCTACTATACTCAAATATCAATTCTAGACTGATGATAATGGGATTATTGCACTaGCGTGTTCTGAAACGAACA +
Preference number: 4 (lower is better)
Translates to: LQSPKALLYSNINSRLMIMGLLH*RVLKRT
Trigger: TGTTCGTTTCAGAACACGCCAGTGCAATAATCCCAT...TATCATCAGTCTAGAATTGATATTTGAGTATAGTAGAGCTTTGGGGCTTTGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp CAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCACACACATATGCTATATaGATCTTTGTAAGAACAGTG +
Preference number: 4 (lower is better)
Translates to: QTKSQLICTIGSSPFSASHTYAI*IFVRTV
Trigger: CACTGTTCTTACAAAGATCCATATAGCATATGTGTG...TGAAGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp CTTCAAAGCCCCAAAGCTCTACTATACTCAAATATCAATTCTAGACTGATGATATTCTGCTACCCAGAGTaGATGTGTACACTCTTGAAT +
Preference number: 4 (lower is better)
Translates to: LQSPKALLYSNINSRLMIFCYPE*MCTLLN
Trigger: ATTCAAGAGTGTACACATCCACTCTGGGTAGCAGAA...TATCATCAGTCTAGAATTGATATTTGAGTATAGTAGAGCTTTGGGGCTTTGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR GCA 90 bp TACTATTCGTTGATCCCTGTGACCACAAGTGTACTAAGACACCAATCCTTTAAAATTATTGCAGTCAGATaGATTGTGGTTGTGAACATT +
Preference number: 4 (lower is better)
Translates to: YYSLIPVTTSVLRHQSFKIIAVR*IVVVNI
Trigger: AATGTTCACAACCACAATGCATCTGACTGCAATAAT...TTTAAAGGATTGGTGTCTTAGTACACTTGTGGTCACAGGGATCAACGAATAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR GCA 90 bp TACGTGCTCTCAGTACAACAAACAGCATCAGTAGTGTACACTTTGATAAAAAGGTTCTTGCACATTCTGTaGTTTGAGAGGTTAATTCAT +
Preference number: 4 (lower is better)
Translates to: YVLSVQQTASVVYTLIKRFLHIL*FERLIH
Trigger: ATGAATTAACCTCTCAAAGCACAGAATGTGCAAGAA...CCTTTTTATCAAAGTGTACACTACTGATGCTGTTTGTTGTACTGAGAGCACGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR CCA 90 bp AAACAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCTGTGTTACAAAGCTaGTACTCAAAATTAACACCA +
Preference number: 4 (lower is better)
Translates to: KQTKSQLICTIGSSPFSASVLQS*YSKLTP
Trigger: TGGTGTTAATTTTGAGTACCAGCTTTGTAACACAGA...AGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CCA 90 bp AAAGACTTAAGGCTTAGGGATTGTTTTACTATCTGGAATTTGCCTAATTTGACCGCAACCAGTGGTGTTTaGTATTCTGGTATTCAAAGT +
Preference number: 4 (lower is better)
Translates to: KDLRLRDCFTIWNLPNLTATSGV*YSGIQS
Trigger: ACTTTGAATACCAGAATACCAAACACCACTGGTTGC...GGTCAAATTAGGCAAATTCCAGATAGTAAAACAATCCCTAAGCCTTAAGTCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR TCA 90 bp CTTCAAAGCCCCAAAGCTCTACTATACTCAAATATCAATTCTAGACTGATGATAACAGATAAAATGAGCTaGCGATCTATAGAGATTTCC +
Preference number: 4 (lower is better)
Translates to: LQSPKALLYSNINSRLMITDKMS*RSIEIS
Trigger: GGAAATCTCTATAGATCGTCAGCTCATTTTATCTGT...TATCATCAGTCTAGAATTGATATTTGAGTATAGTAGAGCTTTGGGGCTTTGAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
3UTR CAA 72 bp CTTAGGGATTGTTTTACTATCTGGAATTTGCCTAATTaGACCTTCAAAGTTCTTGCACAAAGTAGCAGCAAT +
Preference number: 4 (lower is better)
Translates to: LRDCFTIWNLPN*TFKVLAQSSSN
Trigger: ATTGCTGCTACTTTGTGCAAGAACTTTGAAGGTCAAATTAGGCAAATTCCAGATAGTAAAACAATCCCTAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286657.10
3UTR CAA 72 bp GACTTAAGGCTTAGGGATTGTTTTACTATCTGGAATTaGCCTAATTTGACCTTCAAAGTTCTTGCACAAAGT +
Preference number: 4 (lower is better)
Translates to: DLRLRDCFTIWN*PNLTFKVLAQS
Trigger: ACTTTGTGCAAGAACTTTGAAGGTCAAATTAGGCAAATTCCAGATAGTAAAACAATCCCTAAGCCTTAAGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286657.10
3UTR CAA 72 bp AAGTATAATGAATATGTACATCTTTATGGAAACTGTTaGTGTGACCATCTTTATCTTCCCCTGTGGATGAGA +
Preference number: 4 (lower is better)
Translates to: KYNEYVHLYGNC*CDHLYLPLWMR
Trigger: TCTCATCCACAGGGGAAGATAAAGATGGTCACACAAACAGTTTCCATAAAGATGTACATATTCATTATACTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR GCA 90 bp CTTCAAAGCCCCAAAGCTCTACTATACTCAAATATCAATTCTAGACTGATGATAAAATGCAAAAGTTCTTaGACATTCTGTGCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: LQSPKALLYSNINSRLMIKCKSS*TFCALR
Trigger: TCTCAAAGCACAGAATGTGCAAGAACTTTTGCATTT...TATCATCAGTCTAGAATTGATATTTGAGTATAGTAGAGCTTTGGGGCTTTGAAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR CCA 90 bp AAAGACTTAAGGCTTAGGGATTGTTTTACTATCTGGAATTTGCCTAATTTGACCTCTGTGTTACAAAGCTaGTACTCAAAATTAACACCA +
Preference number: 4 (lower is better)
Translates to: KDLRLRDCFTIWNLPNLTSVLQS*YSKLTP
Trigger: TGGTGTTAATTTTGAGTACCAGCTTTGTAACACAGA...GGTCAAATTAGGCAAATTCCAGATAGTAAAACAATCCCTAAGCCTTAAGTCTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS GCA 90 bp TTCTCACCCCGTCCTCCCAACACAGAGTGTGCAGGAGCGAGAAGGTaGTGTAAGCGGGCACAGGCTAAGCCTGGGAGAGGGGGAAGGGAC +
Preference number: 5 (lower is better)
Translates to: FSPRPPNTECAGARR*CKRAQAKPGRGGRD
Trigger: GTCCCTTCCCCCTCTCCCAGGCTTAGCCTGTGCCCGCTTACAGCACCTTCTCGCTCCTGCACACTCTGTGTTGGGAGGACGGGGTGAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS GCA 90 bp CGGGACGGTCACCCATGCAGTATTTGCTGTGCACAGAGCGGTTGGTaGCATCAAGGAGTGGCTGAAGGCAGCGTACAGTGCGAAGCTGAT +
Preference number: 5 (lower is better)
Translates to: RDGHPCSICCAQSGW*HQGVAEGSVQCEAD
Trigger: ATCAGCTTCGCACTGTACGCTGCCTTCAGCCACTCCTTGATGGCACCAACCGCTCTGTGCACAGCAAATACTGCATGGGTGACCGTCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS CCA 90 bp TCTCGGGACGGTCACCCATGCAGTATTTGCTGTGCACAGAGCGGTTaGTGCCATCAAGGAGTGGCTGAAGGCAGCGTACAGTGCGAAGCT +
Preference number: 5 (lower is better)
Translates to: SRDGHPCSICCAQSG*CHQGVAEGSVQCEA
Trigger: AGCTTCGCACTGTACGCTGCCTTCAGCCACTCCTTGATGGCACCAACCGCTCTGTGCACAGCAAATACTGCATGGGTGACCGTCCCGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS CCA 90 bp GCTGCAAAGAAGGAAGCAGCAGCCATTTGTGAAGCTGAACTGAGGTaGACCCTCTTGGTGGGTGGGGAGGATGGTACGGTGACCAGTCTC +
Preference number: 5 (lower is better)
Translates to: AAKKEAAAICEAELR*TLLVGGEDGTVTSL
Trigger: GAGACTGGTCACCGTACCATCCTCCCCACCCACCAAGAGGGTCCACCTCAGTTCAGCTTCACAAATGGCTGCTGCTTCCTTCTTTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS TCA 90 bp CTCCCAAACATGGTTCATCATTACAAGGAGGCAGTTGACAGGCTCTaGCCGACTCAGGCTTTTCACCATCACAGTGGTCCCCAGCCCTGC +
Preference number: 5 (lower is better)
Translates to: LPNMVHHYKEAVDRL*PTQAFHHHSGPQPC
Trigger: GCAGGGCTGGGGACCACTGTGATGGTGAAAAGCCTGAGTCGGTCAGAGCCTGTCAACTGCCTCCTTGTAATGATGAACCATGTTTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS GCA 90 bp CAGAGCGGTTGGTGCCATCAAGGAGTGGCTGAAGGCAGCGTACAGTaGGAAGCTGATAGCCAGAACTTCCACAGGTTTTGGTGCAGTGTT +
Preference number: 5 (lower is better)
Translates to: QSGWCHQGVAEGSVQ*EADSQNFHRFWCSV
Trigger: AACACTGCACCAAAACCTGTGGAAGTTCTGGCTATCAGCTTCGCACTGTACGCTGCCTTCAGCCACTCCTTGATGGCACCAACCGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS CCA 90 bp CATGCAGTATTTGCTGTGCACAGAGCGGTTGGTGCCATCAAGGAGTaGCTGAAGGCAGCGTACAGTGCGAAGCTGATAGCCAGAACTTCC +
Preference number: 5 (lower is better)
Translates to: HAVFAVHRAVGAIKE*LKAAYSAKLIARTS
Trigger: GGAAGTTCTGGCTATCAGCTTCGCACTGTACGCTGCCTTCAGCCACTCCTTGATGGCACCAACCGCTCTGTGCACAGCAAATACTGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS CCA 90 bp GGCAGCGTACAGTGCGAAGCTGATAGCCAGAACTTCCACAGGTTTTaGTGCAGTGTTCCCATTCTTCTGCTACCCAGAGTGGATGTGTAC +
Preference number: 5 (lower is better)
Translates to: GSVQCEADSQNFHRF*CSVPILLLPRVDVY
Trigger: GTACACATCCACTCTGGGTAGCAGAAGAATGGGAACACTGCACCAAAACCTGTGGAAGTTCTGGCTATCAGCTTCGCACTGTACGCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS GCA 90 bp CGTGTCTGCGGCGTCTCATTGTTTCATTCAGCTGCTGGTGGATGTTaGCATAAACAGTACCTAGATCATCAAGGCCTTCCAGGTCCGACT +
Preference number: 5 (lower is better)
Translates to: RVCGVSLFHSAAGGC*HKQYLDHQGLPGPT
Trigger: AGTCGGACCTGGAAGGCCTTGATGATCTAGGTACTGTTTATGGCAACATCCACCAGCAGCTGAATGAAACAATGAGACGCCGCAGACACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS GCA 90 bp CTCCCAGCAGTACCTCGATATTGTAATCGTTTTCTCCCGCGTGTCTaGGGCGTCTCATTGTTTCATTCAGCTGCTGGTGGATGTTGCCAT +
Preference number: 5 (lower is better)
Translates to: LPAVPRYCNRFLPRV*GVSLFHSAAGGCCH
Trigger: ATGGCAACATCCACCAGCAGCTGAATGAAACAATGAGACGCCGCAGACACGCGGGAGAAAACGATTACAATATCGAGGTACTGCTGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS GCA 90 bp CAGCAGCTTCTAGAAGGTATGGTGGTGGCAGGGTGCTACTGCGCTTaGTGCAGGACTCACAACATAACTTGTTATAACCTGGTATGGAGC +
Preference number: 5 (lower is better)
Translates to: QQLLEGMVVAGCYCA*CRTHNITCYNLVWS
Trigger: GCTCCATACCAGGTTATAACAAGTTATGTTGTGAGTCCTGCAGCAAGCGCAGTAGCACCCTGCCACCACCATACCTTCTAGAAGCTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp CACACAAAAACAAAGGACACCTCAACGGTGCCTACTGAGGTCCTGGAAAGAGGGTTTTGGACGTGCTCTTaGCCATGGAAACGGACCACA +
Preference number: 5 (lower is better)
Translates to: HTKTKDTSTVPTEVLERGFWTCS*PWKRTT
Trigger: TGTGGTCCGTTTCCATGGCAAAGAGCACGTCCAAAA...CCCTCTTTCCAGGACCTCAGTAGGCACCGTTGAGGTGTCCTTTGTTTTTGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR CAA 90 bp CAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTGTTGAGATCAGATCTTaGCTGTTGGGACGCCCAGCG +
Preference number: 5 (lower is better)
Translates to: QAYAPWEERGCPGFPLVSVEIRS*LLGRPA
Trigger: CGCTGGGCGTCCCAACAGCAAAGATCTGATCTCAAC...AGAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp TATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATCATGAAGGTCCGCGACTaGGCTTCCTCCCCTTTGCCA +
Preference number: 5 (lower is better)
Translates to: YAQLVPVPFLLQRATNTIMKVRD*ASSPLP
Trigger: TGGCAAAGGGGAGGAAGCCAAGTCGCGGACCTTCAT...GATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAATTGTGCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp ACAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCAGGGTGCTACTGCGCTaGCTGCAGGACTCACAACAT +
Preference number: 5 (lower is better)
Translates to: TSICTMGRERLSRFSSGFRVLLR*LQDSQH
Trigger: ATGTTGTGAGTCCTGCAGCAAGCGCAGTAGCACCCT...GAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp CAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTAGTCTTACTTCCTGCTaGCTGAGCACTCCTCTGGCG +
Preference number: 5 (lower is better)
Translates to: QAYAPWEERGCPGFPLVSSLTSC*LSTPLA
Trigger: CGCCAGAGGAGTGCTCAGCAAGCAGGAAGTAAGACT...AGAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS GCA 90 bp AGCGTACAGTGCGAAGCTGATAGCCAGAACTTCCACAGGTTTTGGTaGAGTGTTCCCATTCTTCTGCTACCCAGAGTGGATGTGTACACT +
Preference number: 5 (lower is better)
Translates to: SVQCEADSQNFHRFW*SVPILLLPRVDVYT
Trigger: AGTGTACACATCCACTCTGGGTAGCAGAAGAATGGGAACACTGCACCAAAACCTGTGGAAGTTCTGGCTATCAGCTTCGCACTGTACGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS GCA 90 bp CAGCTTCTAGAAGGTATGGTGGTGGCAGGGTGCTACTGCGCTTGCTaGAGGACTCACAACATAACTTGTTATAACCTGGTATGGAGCAGT +
Preference number: 5 (lower is better)
Translates to: QLLEGMVVAGCYCAC*RTHNITCYNLVWSS
Trigger: ACTGCTCCATACCAGGTTATAACAAGTTATGTTGTGAGTCCTGCAGCAAGCGCAGTAGCACCCTGCCACCACCATACCTTCTAGAAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp TATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATCAACAACTGCTCAGGGTaGGAAGACACGTCCCTCGCT +
Preference number: 5 (lower is better)
Translates to: YAQLVPVPFLLQRATNTINNCSG*EDTSLA
Trigger: AGCGAGGGACGTGTCTTCCAACCCTGAGCAGTTGTT...GATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAATTGTGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp CAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTGCCAGACCATCACAGTaGCTGATGGCAACAGAGGTT +
Preference number: 5 (lower is better)
Translates to: QAYAPWEERGCPGFPLVSARPSQ*LMATEV
Trigger: AACCTCTGTTGCCATCAGCAACTGTGATGGTCTGGC...AGAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp ATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTAGCCTTTGGTCAGGAGGTAGTTTaGGACGTGCTCTTTGCCATG +
Preference number: 5 (lower is better)
Translates to: MHHGKREVVQVFLWFLAFGQEVV*DVLFAM
Trigger: CATGGCAAAGAGCACGTCCAAAACTACCTCCTGACC...AAAGGCTAGAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp ACAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTCATCACCACACCTGTaGCCTTGTCCATCATGCTCC +
Preference number: 5 (lower is better)
Translates to: TSICTMGRERLSRFSSGFSSPHL*PCPSCS
Trigger: GGAGCATGATGGACAAGGCAACAGGTGTGGTGATGA...GAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp ATATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATATGAAGGTCCGCGACTaGGCTTCCTCCCCTTTGCCA +
Preference number: 5 (lower is better)
Translates to: ICTIGSSPFSASESDQHNMKVRD*ASSPLP
Trigger: TGGCAAAGGGGAGGAAGCCAAGTCGCGGACCTTCAT...ATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAATTGTGCATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS TCA 90 bp GAGGATGGTACGGTGACCAGTCTCACAGTCTTACTTCCTGCTTGCTaGGCACTCCTCTGGCGTAAATTAGCACCATCAGGTTTACTGTTT +
Preference number: 5 (lower is better)
Translates to: EDGTVTSLTVLLPAC*ALLWRKLAPSGLLF
Trigger: AAACAGTAAACCTGATGGTGCTAATTTACGCCAGAGGAGTGCTCAGCAAGCAGGAAGTAAGACTGTGAGACTGGTCACCGTACCATCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS GCA 90 bp GAGTTTCAGCAGCTTCTAGAAGGTATGGTGGTGGCAGGGTGCTACTaGGCTTGCTGCAGGACTCACAACATAACTTGTTATAACCTGGTA +
Preference number: 5 (lower is better)
Translates to: EFQQLLEGMVVAGCY*ACCRTHNITCYNLV
Trigger: TACCAGGTTATAACAAGTTATGTTGTGAGTCCTGCAGCAAGCGCAGTAGCACCCTGCCACCACCATACCTTCTAGAAGCTGCTGAAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS CCA 90 bp CATTCCAGCCAGACCATCACAGTTGCTGATGGCAACAGAGGTTCCTaGAATGTCCACGATGTCACCAACATAAGCACAGTTAGTCTGCAA +
Preference number: 5 (lower is better)
Translates to: HSSQTITVADGNRGS*NVHDVTNISTVSLQ
Trigger: TTGCAGACTAACTGTGCTTATGTTGGTGACATCGTGGACATTCCAGGAACCTCTGTTGCCATCAGCAACTGTGATGGTCTGGCTGGAATG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp TATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATCACCACACCTGTTGCCTaGTCCATCATGCTCCATTCC +
Preference number: 5 (lower is better)
Translates to: YAQLVPVPFLLQRATNTITTPVA*SIMLHS
Trigger: GGAATGGAGCATGATGGACAAGGCAACAGGTGTGGT...GATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAATTGTGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp ATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATCTTAGCAACGGTTTCGGCTTTTTGTaGGCCTCACAGAAGCTGCGA +
Preference number: 5 (lower is better)
Translates to: IGSSPFSASESDQHNLSNGFGFL*ASQKLR
Trigger: TCGCAGCTTCTGTGAGGCCAACAAAAAGCCGAAACC...GTTGCTAAGATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp CAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCACTGTGCACAGAGCGGTaGGTGCCATCAAGGAGTGGC +
Preference number: 5 (lower is better)
Translates to: QTKSQLICTIGSSPFSASLCTER*VPSRSG
Trigger: GCCACTCCTTGATGGCACCAACCGCTCTGTGCACAG...TGAAGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS GCA 90 bp CATCATGAGTTTCAGCAGCTTCTAGAAGGTATGGTGGTGGCAGGGTaGTACTGCGCTTGCTGCAGGACTCACAACATAACTTGTTATAAC +
Preference number: 5 (lower is better)
Translates to: HHEFQQLLEGMVVAG*YCACCRTHNITCYN
Trigger: GTTATAACAAGTTATGTTGTGAGTCCTGCAGCAAGCGCAGTAGCACCCTGCCACCACCATACCTTCTAGAAGCTGCTGAAACTCATGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS CCA 90 bp AGTCTGCAAAGGCTCTGTTCTCCGGATTCTATACGTAGCACTTCCTaGTTGATGGTTGTTAATGGGATCGGTTATATTCCCAGGCACCAG +
Preference number: 5 (lower is better)
Translates to: SLQRLCSPDSIRSTS*LMVVNGIGYIPRHQ
Trigger: CTGGTGCCTGGGAATATAACCGATCCCATTAACAACCATCAACCAGGAAGTGCTACGTATAGAATCCGGAGAACAGAGCCTTTGCAGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286657.10
ENST00000505193.1
ENST00000622135.1
CDS CCA 90 bp CTTCCAGGTCCGACTCTCTGTAGTGGAAGTCTTTGGACATGTCTATaGGAGCCTGTTCTACAGCTGATCTCTTGTAGACAACATGAATCC +
Preference number: 5 (lower is better)
Translates to: LPGPTLCSGSLWTCL*EPVLQLISCRQHES
Trigger: GGATTCATGTTGTCTACAAGAGATCAGCTGTAGAACAGGCTCCCATAGACATGTCCAAAGACTTCCACTACAGAGAGTCGGACCTGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS CCA 90 bp GACAGAGTTCAGACCATCACAGTTGCTGATGGCAACAGAGGTTCCTaGAATGTCCACGATGTCACCAACATAAGCACAGTTAGTCTGCAA +
Preference number: 5 (lower is better)
Translates to: DRVQTITVADGNRGS*NVHDVTNISTVSLQ
Trigger: TTGCAGACTAACTGTGCTTATGTTGGTGACATCGTGGACATTCCAGGAACCTCTGTTGCCATCAGCAACTGTGATGGTCTGAACTCTGTC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505193.1
CDS-3UTR CAA 90 bp ATATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATGTCTGCGGCGTCTCATaGTTTCATTCAGCTGCTGGT +
Preference number: 5 (lower is better)
Translates to: ICTIGSSPFSASESDQHNVCGVS*FHSAAG
Trigger: ACCAGCAGCTGAATGAAACAATGAGACGCCGCAGAC...ATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAATTGTGCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp AAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTAGCCTTTTTGGTTCACTTTATCAGATCTTTGCTGTaGGGACGCCCAGCGACACAC +
Preference number: 5 (lower is better)
Translates to: KREVVQVFLWFLAFLVHFIRSLL*GRPATH
Trigger: GTGTGTCGCTGGGCGTCCCAACAGCAAAGATCTGAT...AAAGTGAACCAAAAAGGCTAGAAACCAGAGGAAAACCTGGACAACCTCTCTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp ATTTCCACTTTAAACAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTGTTGAGATCAGATCTTaGCTGTTGGGACGCCCAGCG +
Preference number: 5 (lower is better)
Translates to: ISTLNKHMHHGKREVVQVVEIRS*LLGRPA
Trigger: CGCTGGGCGTCCCAACAGCAAAGATCTGATCTCAAC...AACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTGTTTAAAGTGGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp ATATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATACGATGGAATGCTGCTaGTACCAAGGGAGCCATGAC +
Preference number: 5 (lower is better)
Translates to: ICTIGSSPFSASESDQHNTMECC*YQGSHD
Trigger: GTCATGGCTCCCTTGGTACAAGCAGCATTCCATCGT...ATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAATTGTGCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS TCA 90 bp TGCAAAGGCTCTGTTCTCCGGATTCTATACGTAGCACTTCCTGGTTaGTGGTTGTTAATGGGATCGGTTATATTCCCAGGCACCAGAGAT +
Preference number: 5 (lower is better)
Translates to: CKGSVLRILYVALPG*WLLMGSVIFPGTRD
Trigger: ATCTCTGGTGCCTGGGAATATAACCGATCCCATTAACAACCATCAACCAGGAAGTGCTACGTATAGAATCCGGAGAACAGAGCCTTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286657.10
ENST00000505193.1
ENST00000622135.1
CDS TCA 90 bp AACATTAAAAGGGAAGCCTTGACAAGAAGTCCAGTAAGTGGCTACTaGTATCGGTTCCACAACTTAATGACGTTGAGGCTGGCACGAGGG +
Preference number: 5 (lower is better)
Translates to: NIKREALTRSPVSGY*YRFHNLMTLRLARG
Trigger: CCCTCGTGCCAGCCTCAACGTCATTAAGTTGTGGAACCGATATCAGTAGCCACTTACTGGACTTCTTGTCAAGGCTTCCCTTTTAATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505193.1
CDS GCA 90 bp GGAGACAGTCATAGGAATGGATATATCTTTTCAGTTCTTGACCACTaGATCGGGACCAGTGGTAACGATGGAATGCTGCTTGTACCAAGG +
Preference number: 5 (lower is better)
Translates to: GDSHRNGYIFSVLDH*IGTSGNDGMLLVPR
Trigger: CCTTGGTACAAGCAGCATTCCATCGTTACCACTGGTCCCGATGCAGTGGTCAAGAACTGAAAAGATATATCCATTCCTATGACTGTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS GCA 90 bp ATGTTTTCTCTGGGTTCTATGGGTCAGGATTTCAGAGAGGCACAATaGAGATGGCTTCTCTTTGCTCCACAATGTCTGAAGACTAGCTGG +
Preference number: 5 (lower is better)
Translates to: MFSLGSMGQDFREAQ*RWLLFAPQCLKTSW
Trigger: CCAGCTAGTCTTCAGACATTGTGGAGCAAAGAGAAGCCATCTGCATTGTGCCTCTCTGAAATCCTGACCCATAGAACCCAGAGAAAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505193.1
CDS-3UTR CAA 90 bp AAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTAGCCTTTTTGGTTCACTTTTCATCACCACACCTGTaGCCTTGTCCATCATGCTCC +
Preference number: 5 (lower is better)
Translates to: KREVVQVFLWFLAFLVHFSSPHL*PCPSCS
Trigger: GGAGCATGATGGACAAGGCAACAGGTGTGGTGATGA...AAAGTGAACCAAAAAGGCTAGAAACCAGAGGAAAACCTGGACAACCTCTCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp CACACAAAAACAAAGGACACCTCAACGGTGCCTACTGAGGTCCTGGAAAGAGGGATGACATTGTTGCTGTaGATTGTAGGTACAGAGTCT +
Preference number: 5 (lower is better)
Translates to: HTKTKDTSTVPTEVLERGMTLLL*IVGTES
Trigger: AGACTCTGTACCTACAATCAACAGCAACAATGTCAT...CCCTCTTTCCAGGACCTCAGTAGGCACCGTTGAGGTGTCCTTTGTTTTTGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR CAA 90 bp ATTTCCACTTTAAACAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTGGTTTCGGCTTTTTGTaGGCCTCACAGAAGCTGCGA +
Preference number: 5 (lower is better)
Translates to: ISTLNKHMHHGKREVVQVGFGFL*ASQKLR
Trigger: TCGCAGCTTCTGTGAGGCCAACAAAAAGCCGAAACC...AACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTGTTTAAAGTGGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp ATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATCTTAGCAACGAACTTCCACAGGTTTaGGTGCAGTGTTCCCATTCT +
Preference number: 5 (lower is better)
Translates to: IGSSPFSASESDQHNLSNELPQV*VQCSHS
Trigger: AGAATGGGAACACTGCACCAAAACCTGTGGAAGTTC...GTTGCTAAGATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp ATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTAGCCTTTCTTTCTTTGAGGTTCTaGCCTGAGAAGAAGCACCTA +
Preference number: 5 (lower is better)
Translates to: MHHGKREVVQVFLWFLAFLSLRF*PEKKHL
Trigger: TAGGTGCTTCTTCTCAGGCAAGAACCTCAAAGAAAG...AAAGGCTAGAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp CAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTCTTGTCGGACGTCTGTaGTCAATGATCTTTCCATCT +
Preference number: 5 (lower is better)
Translates to: QAYAPWEERGCPGFPLVSLVGRL*SMIFPS
Trigger: AGATGGAAAGATCATTGACAACAGACGTCCGACAAG...AGAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS TCA 90 bp CAGTGGTGTTTGGTATTCTGGTATTCAAAGTGGGAGTTTCGCTGCTaGCACTGCTGTGCTCTGAAGTCCTCAAAGTGTTTTTGGCATTCT +
Preference number: 5 (lower is better)
Translates to: QWCLVFWYSKWEFRC*HCCALKSSKCFWHS
Trigger: AGAATGCCAAAAACACTTTGAGGACTTCAGAGCACAGCAGTGTCAGCAGCGAAACTCCCACTTTGAATACCAGAATACCAAACACCACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS CCA 90 bp ATCTTTTCTTGGGGTCAGGATGTTCATATGGCAACCAGTGGTGTTTaGTATTCTGGTATTCAAAGTGGGAGTTTCGCTGCTGACACTGCT +
Preference number: 5 (lower is better)
Translates to: IFSWGQDVHMATSGV*YSGIQSGSFAADTA
Trigger: AGCAGTGTCAGCAGCGAAACTCCCACTTTGAATACCAGAATACCAAACACCACTGGTTGCCATATGAACATCCTGACCCCAAGAAAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp TATTTACTATTCGTTGATCCCTGTGACCACAAGTGTACTAAGACACCAATCCTTAACAACTGCTCAGGGTaGGAAGACACGTCCCTCGCT +
Preference number: 5 (lower is better)
Translates to: YLLFVDPCDHKCTKTPILNNCSG*EDTSLA
Trigger: AGCGAGGGACGTGTCTTCCAACCCTGAGCAGTTGTT...AAGGATTGGTGTCTTAGTACACTTGTGGTCACAGGGATCAACGAATAGTAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR CAA 90 bp CAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAGCCAGACCATCACAGTaGCTGATGGCAACAGAGGTT +
Preference number: 5 (lower is better)
Translates to: QTKSQLICTIGSSPFSASARPSQ*LMATEV
Trigger: AACCTCTGTTGCCATCAGCAACTGTGATGGTCTGGC...TGAAGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp GCACGAGTTCATTATTTACTATTCGTTGATCCCTGTGACCACAAGTGTACTAAGGGTCAGGAGGTAGTTTaGGACGTGCTCTTTGCCATG +
Preference number: 5 (lower is better)
Translates to: ARVHYLLFVDPCDHKCTKGQEVV*DVLFAM
Trigger: CATGGCAAAGAGCACGTCCAAAACTACCTCCTGACC...CTTAGTACACTTGTGGTCACAGGGATCAACGAATAGTAAATAATGAACTCGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR CAA 90 bp TATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATCTGGTGTTCAGAGTGGTaGAGATCAGATCTTTGCTGT +
Preference number: 5 (lower is better)
Translates to: YAQLVPVPFLLQRATNTIWCSEW*RSDLCC
Trigger: ACAGCAAAGATCTGATCTCAACCACTCTGAACACCA...GATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAATTGTGCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp AAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTAGCCTTTTTGGTTCACTTTGACTGGAGCATATCCTaGCATTCCAGCAGGTCCAAA +
Preference number: 5 (lower is better)
Translates to: KREVVQVFLWFLAFLVHFDWSIS*HSSRSK
Trigger: TTTGGACCTGCTGGAATGCAAGGATATGCTCCAGTC...AAAGTGAACCAAAAAGGCTAGAAACCAGAGGAAAACCTGGACAACCTCTCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp GCACGAGTTCATTATTTACTATTCGTTGATCCCTGTGACCACAAGTGTACTAAGACGATGGAATGCTGCTaGTACCAAGGGAGCCATGAC +
Preference number: 5 (lower is better)
Translates to: ARVHYLLFVDPCDHKCTKTMECC*YQGSHD
Trigger: GTCATGGCTCCCTTGGTACAAGCAGCATTCCATCGT...CTTAGTACACTTGTGGTCACAGGGATCAACGAATAGTAAATAATGAACTCGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR CAA 90 bp TATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATCATATCTTTTCAGTTCTaGACCACTGCATCGGGACCA +
Preference number: 5 (lower is better)
Translates to: YAQLVPVPFLLQRATNTIISFQF*TTASGP
Trigger: TGGTCCCGATGCAGTGGTCAAGAACTGAAAAGATAT...GATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAATTGTGCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp ATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATCTTAGCAACGGCAACCAGTGGTGTTaGGTATTCTGGTATTCAAAG +
Preference number: 5 (lower is better)
Translates to: IGSSPFSASESDQHNLSNGNQWC*VFWYSK
Trigger: CTTTGAATACCAGAATACCAAACACCACTGGTTGCC...GTTGCTAAGATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp CTTCAAAGCCCCAAAGCTCTACTATACTCAAATATCAATTCTAGACTGATGATACTGTGCACAGAGCGGTaGGTGCCATCAAGGAGTGGC +
Preference number: 5 (lower is better)
Translates to: LQSPKALLYSNINSRLMILCTER*VPSRSG
Trigger: GCCACTCCTTGATGGCACCAACCGCTCTGTGCACAG...TATCATCAGTCTAGAATTGATATTTGAGTATAGTAGAGCTTTGGGGCTTTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp ATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTAGCCTTTTGCCAACACTTCCATTaGACAGAATATGGACTTGTC +
Preference number: 5 (lower is better)
Translates to: MHHGKREVVQVFLWFLAFCQHFH*TEYGLV
Trigger: GACAAGTCCATATTCTGTCAAATGGAAGTGTTGGCA...AAAGGCTAGAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp TACTATTCGTTGATCCCTGTGACCACAAGTGTACTAAGACACCAATCCTTTAAAAGGGTGCTACTGCGCTaGCTGCAGGACTCACAACAT +
Preference number: 5 (lower is better)
Translates to: YYSLIPVTTSVLRHQSFKRVLLR*LQDSQH
Trigger: ATGTTGTGAGTCCTGCAGCAAGCGCAGTAGCACCCT...TTTAAAGGATTGGTGTCTTAGTACACTTGTGGTCACAGGGATCAACGAATAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR CAA 90 bp TATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATCGAGAAGAAGCACCTATaGAATCACTGGCTGCAAAGA +
Preference number: 5 (lower is better)
Translates to: YAQLVPVPFLLQRATNTIEKKHL*NHWLQR
Trigger: TCTTTGCAGCCAGTGATTCAATAGGTGCTTCTTCTC...GATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAATTGTGCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp ATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTAGCCTTTGTTGGCTGTAGTAGTTaGCTTAAAGGTCTCTATGCA +
Preference number: 5 (lower is better)
Translates to: MHHGKREVVQVFLWFLAFVGCSS*LKGLYA
Trigger: TGCATAGAGACCTTTAAGCAAACTACTACAGCCAAC...AAAGGCTAGAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS TCA 90 bp TCTGGTATTCAAAGTGGGAGTTTCGCTGCTGACACTGCTGTGCTCTaGAGTCCTCAAAGTGTTTTTGGCATTCTTCTGTGTTACAAAGCT +
Preference number: 5 (lower is better)
Translates to: SGIQSGSFAADTAVL*SPQSVFGILLCYKA
Trigger: AGCTTTGTAACACAGAAGAATGCCAAAAACACTTTGAGGACTTCAGAGCACAGCAGTGTCAGCAGCGAAACTCCCACTTTGAATACCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS GCA 90 bp GGTATTCTGGTATTCAAAGTGGGAGTTTCGCTGCTGACACTGCTGTaGTCTGAAGTCCTCAAAGTGTTTTTGGCATTCTTCTGTGTTACA +
Preference number: 5 (lower is better)
Translates to: GILVFKVGVSLLTLL*SEVLKVFLAFFCVT
Trigger: TGTAACACAGAAGAATGCCAAAAACACTTTGAGGACTTCAGAGCACAGCAGTGTCAGCAGCGAAACTCCCACTTTGAATACCAGAATACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp AAACAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTGTCTGCGGCGTCTCATaGTTTCATTCAGCTGCTGGT +
Preference number: 5 (lower is better)
Translates to: KQTKSQLICTIGSSPFSAVCGVS*FHSAAG
Trigger: ACCAGCAGCTGAATGAAACAATGAGACGCCGCAGAC...AGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp CAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCATTTTGGACGTGCTCTTaGCCATGGAAACGGACCACA +
Preference number: 5 (lower is better)
Translates to: QTKSQLICTIGSSPFSASFWTCS*PWKRTT
Trigger: TGTGGTCCGTTTCCATGGCAAAGAGCACGTCCAAAA...TGAAGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp CAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAGACTGGAGCATATCCTaGCATTCCAGCAGGTCCAAA +
Preference number: 5 (lower is better)
Translates to: QTKSQLICTIGSSPFSASDWSIS*HSSRSK
Trigger: TTTGGACCTGCTGGAATGCAAGGATATGCTCCAGTC...TGAAGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp AAACAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTACCACACCTGTTGCCTaGTCCATCATGCTCCATTCC +
Preference number: 5 (lower is better)
Translates to: KQTKSQLICTIGSSPFSATTPVA*SIMLHS
Trigger: GGAATGGAGCATGATGGACAAGGCAACAGGTGTGGT...AGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp ATTTCCACTTTAAACAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTATGGGCATGGGATTATaGCACTGGCGTGTTCTGAAA +
Preference number: 5 (lower is better)
Translates to: ISTLNKHMHHGKREVVQVMGMGL*HWRVLK
Trigger: TTTCAGAACACGCCAGTGCAATAATCCCATGCCCAT...AACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTGTTTAAAGTGGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp ATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATCTTAGCAACTCCATCATGCACCAGTaGTTTCATGTAAGCAACATC +
Preference number: 5 (lower is better)
Translates to: IGSSPFSASESDQHNLSNSIMHQ*FHVSNI
Trigger: GATGTTGCTTACATGAAACAACTGGTGCATGATGGA...GTTGCTAAGATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp TATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATCTCCTGGATGACATTGTaGCTGTTGATTGTAGGTACA +
Preference number: 5 (lower is better)
Translates to: YAQLVPVPFLLQRATNTISWMTL*LLIVGT
Trigger: TGTACCTACAATCAACAGCAACAATGTCATCCAGGA...GATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAATTGTGCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp TATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATCTCTTCCTGGATGACATaGTTGCTGTTGATTGTAGGT +
Preference number: 5 (lower is better)
Translates to: YAQLVPVPFLLQRATNTISSWMT*LLLIVG
Trigger: ACCTACAATCAACAGCAACAATGTCATCCAGGAAGA...GATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAATTGTGCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp ATTTCCACTTTAAACAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTGAACTTCCACAGGTTTaGGTGCAGTGTTCCCATTCT +
Preference number: 5 (lower is better)
Translates to: ISTLNKHMHHGKREVVQVELPQV*VQCSHS
Trigger: AGAATGGGAACACTGCACCAAAACCTGTGGAAGTTC...AACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTGTTTAAAGTGGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp ATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATCTTAGCAACTGCCAACACTTCCATTaGACAGAATATGGACTTGTC +
Preference number: 5 (lower is better)
Translates to: IGSSPFSASESDQHNLSNCQHFH*TEYGLV
Trigger: GACAAGTCCATATTCTGTCAAATGGAAGTGTTGGCA...GTTGCTAAGATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp ATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATCTTAGCAACTCAAAGACATCTTCTTaGCAGGGGTCTCTGAATGAT +
Preference number: 5 (lower is better)
Translates to: IGSSPFSASESDQHNLSNSKTSS*QGSLND
Trigger: ATCATTCAGAGACCCCTGCAAAGAAGATGTCTTTGA...GTTGCTAAGATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp ATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATCTTAGCAACTCTTTCCATCTTTCTTaGAGGTTCTTGCCTGAGAAG +
Preference number: 5 (lower is better)
Translates to: IGSSPFSASESDQHNLSNSFHLS*RFLPEK
Trigger: CTTCTCAGGCAAGAACCTCAAAGAAAGATGGAAAGA...GTTGCTAAGATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS TCA 90 bp CGTCTGTTGTCAATGATCTTTCCATCTTTCTTTGAGGTTCTTGCCTaGGAAGAAGCACCTATTGAATCACTGGCTGCAAAGAAGGAAGCA +
Preference number: 5 (lower is better)
Translates to: RLLSMIFPSFFEVLA*EEAPIESLAAKKEA
Trigger: TGCTTCCTTCTTTGCAGCCAGTGATTCAATAGGTGCTTCTTCTCAGGCAAGAACCTCAAAGAAAGATGGAAAGATCATTGACAACAGACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS GCA 90 bp TTTCTTTATCACAGCCCACTTTCACACACTCTCCTCGCACACATATaGTATATGGATCTTTGTAAGAACAGTGCGTTCCATCATGCACCA +
Preference number: 5 (lower is better)
Translates to: FLYHSPLSHTLLAHI*YMDLCKNSAFHHAP
Trigger: TGGTGCATGATGGAACGCACTGTTCTTACAAAGATCCATATAGCATATGTGTGCGAGGAGAGTGTGTGAAAGTGGGCTGTGATAAAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286657.10
ENST00000511274.1
ENST00000622135.1
CDS-3UTR CAA 90 bp CTTCAAAGCCCCAAAGCTCTACTATACTCAAATATCAATTCTAGACTGATGATAGCTTTTCGAGCACCATaGGTCCCTAAGGTTAGCGCG +
Preference number: 5 (lower is better)
Translates to: LQSPKALLYSNINSRLMIAFRAP*VPKVSA
Trigger: CGCGCTAACCTTAGGGACCAATGGTGCTCGAAAAGC...TATCATCAGTCTAGAATTGATATTTGAGTATAGTAGAGCTTTGGGGCTTTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR CAA 90 bp CTTCAAAGCCCCAAAGCTCTACTATACTCAAATATCAATTCTAGACTGATGATAATCAGATCTTTGCTGTaGGGACGCCCAGCGACACAC +
Preference number: 5 (lower is better)
Translates to: LQSPKALLYSNINSRLMIIRSLL*GRPATH
Trigger: GTGTGTCGCTGGGCGTCCCAACAGCAAAGATCTGAT...TATCATCAGTCTAGAATTGATATTTGAGTATAGTAGAGCTTTGGGGCTTTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp AAGAGAGAGGTTGTCCAGGTTTTCCTCTGGTTTCTAGCCTTTTTGGTTCACTTTTGGTGTTCAGAGTGGTaGAGATCAGATCTTTGCTGT +
Preference number: 5 (lower is better)
Translates to: KREVVQVFLWFLAFLVHFWCSEW*RSDLCC
Trigger: ACAGCAAAGATCTGATCTCAACCACTCTGAACACCA...AAAGTGAACCAAAAAGGCTAGAAACCAGAGGAAAACCTGGACAACCTCTCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp ATTTCCACTTTAAACAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTGGCAACCAGTGGTGTTaGGTATTCTGGTATTCAAAG +
Preference number: 5 (lower is better)
Translates to: ISTLNKHMHHGKREVVQVGNQWC*VFWYSK
Trigger: CTTTGAATACCAGAATACCAAACACCACTGGTTGCC...AACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTGTTTAAAGTGGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp ATATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATTCTTCCTGGATGACATaGTTGCTGTTGATTGTAGGT +
Preference number: 5 (lower is better)
Translates to: ICTIGSSPFSASESDQHNSSWMT*LLLIVG
Trigger: ACCTACAATCAACAGCAACAATGTCATCCAGGAAGA...ATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAATTGTGCATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp CAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAATAGGTTTCGGCTTTTaGTTGGCCTCACAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: QTKSQLICTIGSSPFSASIGFGF*LASQKL
Trigger: CAGCTTCTGTGAGGCCAACAAAAAGCCGAAACCTAT...TGAAGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp CTTCAAAGCCCCAAAGCTCTACTATACTCAAATATCAATTCTAGACTGATGATAAGTCTTACTTCCTGCTaGCTGAGCACTCCTCTGGCG +
Preference number: 5 (lower is better)
Translates to: LQSPKALLYSNINSRLMISLTSC*LSTPLA
Trigger: CGCCAGAGGAGTGCTCAGCAAGCAGGAAGTAAGACT...TATCATCAGTCTAGAATTGATATTTGAGTATAGTAGAGCTTTGGGGCTTTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp ATTTCCACTTTAAACAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTCTTGTCGGACGTCTGTaGTCAATGATCTTTCCATCT +
Preference number: 5 (lower is better)
Translates to: ISTLNKHMHHGKREVVQVLVGRL*SMIFPS
Trigger: AGATGGAAAGATCATTGACAACAGACGTCCGACAAG...AACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTGTTTAAAGTGGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp CAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCACTAAGGTGGATGATCTaGTCGGACGTCTGTTGTCAA +
Preference number: 5 (lower is better)
Translates to: QTKSQLICTIGSSPFSASLRWMI*SDVCCQ
Trigger: TTGACAACAGACGTCCGACAAGATCATCCACCTTAG...TGAAGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS TCA 90 bp CAATGTCATCTTCAATGTTATAATCCCACTCCACACCAAGATCTATaGAGGTCCGCGACTTGGCTTCCTCCCCTTTGCCATTTAAAATAT +
Preference number: 5 (lower is better)
Translates to: QCHLQCYNPTPHQDL*RSATWLPPLCHLKY
Trigger: ATATTTTAAATGGCAAAGGGGAGGAAGCCAAGTCGCGGACCTTCATAGATCTTGGTGTGGAGTGGGATTATAACATTGAAGATGACATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286657.10
ENST00000511274.1
ENST00000622135.1
CDS TCA 90 bp AATAAATGTGTTCAATGGTTACCTCCACCACAGGGTTTGGAACACTaGGACCAGCTCTTCAAAGCCCACTCAAAAGTATCTAATTCTTCC +
Preference number: 5 (lower is better)
Translates to: NKCVQWLPPPQGLEH*DQLFKAHSKVSNSS
Trigger: GGAAGAATTAGATACTTTTGAGTGGGCTTTGAAGAGCTGGTCTCAGTGTTCCAAACCCTGTGGTGGAGGTAACCATTGAACACATTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511274.1
CDS CCA 90 bp AGGCTGCACATTTGTCATGGGGAAAAGGCTAAACAGAGCTGGTGTTaGTTTATTCATCAGTCACATCAATGTTGTTGCTACCAGCTTAAA +
Preference number: 5 (lower is better)
Translates to: RLHICHGEKAKQSWC*FIHQSHQCCCYQLK
Trigger: TTTAAGCTGGTAGCAACAACATTGATGTGACTGATGAATAAACCAACACCAGCTCTGTTTAGCCTTTTCCCCATGACAAATGTGCAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505193.1
CDS-3UTR CAA 90 bp AAACAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTATGGGCATGGGATTATaGCACTGGCGTGTTCTGAAA +
Preference number: 5 (lower is better)
Translates to: KQTKSQLICTIGSSPFSAMGMGL*HWRVLK
Trigger: TTTCAGAACACGCCAGTGCAATAATCCCATGCCCAT...AGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp ATTTCCACTTTAAACAAGCATATGCACCATGGGAAGAGAGAGGTTGTCCAGGTTTCCATCATGCACCAGTaGTTTCATGTAAGCAACATC +
Preference number: 5 (lower is better)
Translates to: ISTLNKHMHHGKREVVQVSIMHQ*FHVSNI
Trigger: GATGTTGCTTACATGAAACAACTGGTGCATGATGGA...AACCTGGACAACCTCTCTCTTCCCATGGTGCATATGCTTGTTTAAAGTGGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp AAAGACTTAAGGCTTAGGGATTGTTTTACTATCTGGAATTTGCCTAATTTGACCATTACAAGGAGGCAGTaGACAGGCTCTGACCGACTC +
Preference number: 5 (lower is better)
Translates to: KDLRLRDCFTIWNLPNLTITRRQ*TGSDRL
Trigger: GAGTCGGTCAGAGCCTGTCAACTGCCTCCTTGTAAT...GGTCAAATTAGGCAAATTCCAGATAGTAAAACAATCCCTAAGCCTTAAGTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR CAA 90 bp CTTCAAAGCCCCAAAGCTCTACTATACTCAAATATCAATTCTAGACTGATGATAATTACAAGGAGGCAGTaGACAGGCTCTGACCGACTC +
Preference number: 5 (lower is better)
Translates to: LQSPKALLYSNINSRLMIITRRQ*TGSDRL
Trigger: GAGTCGGTCAGAGCCTGTCAACTGCCTCCTTGTAAT...TATCATCAGTCTAGAATTGATATTTGAGTATAGTAGAGCTTTGGGGCTTTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp TACGTGCTCTCAGTACAACAAACAGCATCAGTAGTGTACACTTTGATAAAAAGGAAGCAGCATATGCATTaGGACCTCCCACTGAAGAGA +
Preference number: 5 (lower is better)
Translates to: YVLSVQQTASVVYTLIKRKQHMH*DLPLKR
Trigger: TCTCTTCAGTGGGAGGTCCAAATGCATATGCTGCTT...CCTTTTTATCAAAGTGTACACTACTGATGCTGTTTGTTGTACTGAGAGCACGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR CAA 90 bp AAACAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTAAGCAGCATATGCATTaGGACCTCCCACTGAAGAGA +
Preference number: 5 (lower is better)
Translates to: KQTKSQLICTIGSSPFSAKQHMH*DLPLKR
Trigger: TCTCTTCAGTGGGAGGTCCAAATGCATATGCTGCTT...AGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp CAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAAGAAGCACCTATaGAATCACTGGCTGCAAAGA +
Preference number: 5 (lower is better)
Translates to: QTKSQLICTIGSSPFSASEKKHL*NHWLQR
Trigger: TCTTTGCAGCCAGTGATTCAATAGGTGCTTCTTCTC...TGAAGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp AAACAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTCTAAGGTGGATGATCTaGTCGGACGTCTGTTGTCAA +
Preference number: 5 (lower is better)
Translates to: KQTKSQLICTIGSSPFSALRWMI*SDVCCQ
Trigger: TTGACAACAGACGTCCGACAAGATCATCCACCTTAG...AGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp AAACAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTCTTTCTTTGAGGTTCTaGCCTGAGAAGAAGCACCTA +
Preference number: 5 (lower is better)
Translates to: KQTKSQLICTIGSSPFSALSLRF*PEKKHL
Trigger: TAGGTGCTTCTTCTCAGGCAAGAACCTCAAAGAAAG...AGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp ATATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATATTATTTACTATTCGTaGATCCCTGTGACCACAAGT +
Preference number: 5 (lower is better)
Translates to: ICTIGSSPFSASESDQHNIIYYS*IPVTTS
Trigger: ACTTGTGGTCACAGGGATCAACGAATAGTAAATAAT...ATTGTGTTGGTCGCTCTCTGAAGCAGAAAAGGGACTGGAACCAATTGTGCATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR CAA 90 bp AAAGACTTAAGGCTTAGGGATTGTTTTACTATCTGGAATTTGCCTAATTTGACCATAGGTTTCGGCTTTTaGTTGGCCTCACAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: KDLRLRDCFTIWNLPNLTIGFGF*LASQKL
Trigger: CAGCTTCTGTGAGGCCAACAAAAAGCCGAAACCTAT...GGTCAAATTAGGCAAATTCCAGATAGTAAAACAATCCCTAAGCCTTAAGTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR CAA 90 bp CAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCATGGATGTGTACACTCTaGAATATTGCACATTCGTCT +
Preference number: 5 (lower is better)
Translates to: QTKSQLICTIGSSPFSASWMCTL*NIAHSS
Trigger: AGACGAATGTGCAATATTCAAGAGTGTACACATCCA...TGAAGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp AAACAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAAAGACATCTTCTTaGCAGGGGTCTCTGAATGAT +
Preference number: 5 (lower is better)
Translates to: KQTKSQLICTIGSSPFSASKTSS*QGSLND
Trigger: ATCATTCAGAGACCCCTGCAAAGAAGATGTCTTTGA...AGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp GAAAGAGGGTTTCAGTTTTGTCTTGCACGAGTTCATTATTTACTATTCGTTGATATATCTTTTCAGTTCTaGACCACTGCATCGGGACCA +
Preference number: 5 (lower is better)
Translates to: ERGFQFCLARVHYLLFVDISFQF*TTASGP
Trigger: TGGTCCCGATGCAGTGGTCAAGAACTGAAAAGATAT...ATCAACGAATAGTAAATAATGAACTCGTGCAAGACAAAACTGAAACCCTCTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR CAA 90 bp AAACAAACAAAAAGTCAGCTGATATGCACAATTGGTTCCAGTCCCTTTTCTGCTATGACATTGTTGCTGTaGATTGTAGGTACAGAGTCT +
Preference number: 5 (lower is better)
Translates to: KQTKSQLICTIGSSPFSAMTLLL*IVGTES
Trigger: AGACTCTGTACCTACAATCAACAGCAACAATGTCAT...AGCAGAAAAGGGACTGGAACCAATTGTGCATATCAGCTGACTTTTTGTTTGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp GCACGAGTTCATTATTTACTATTCGTTGATCCCTGTGACCACAAGTGTACTAAGGTTTTAGCTTTTGAGTaGGCTGTAGTAGTTTGCTTA +
Preference number: 5 (lower is better)
Translates to: ARVHYLLFVDPCDHKCTKVLAFE*AVVVCL
Trigger: TAAGCAAACTACTACAGCCAACTCAAAAGCTAAAAC...CTTAGTACACTTGTGGTCACAGGGATCAACGAATAGTAAATAATGAACTCGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR CAA 90 bp CTTCAAAGCCCCAAAGCTCTACTATACTCAAATATCAATTCTAGACTGATGATATCTTTCCATCTTTCTTaGAGGTTCTTGCCTGAGAAG +
Preference number: 5 (lower is better)
Translates to: LQSPKALLYSNINSRLMISFHLS*RFLPEK
Trigger: CTTCTCAGGCAAGAACCTCAAAGAAAGATGGAAAGA...TATCATCAGTCTAGAATTGATATTTGAGTATAGTAGAGCTTTGGGGCTTTGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS-3UTR CAA 90 bp TACGTGCTCTCAGTACAACAAACAGCATCAGTAGTGTACACTTTGATAAAAAGGATTATTAGCACATTATaGCAGTCAGATGCATTGTGG +
Preference number: 5 (lower is better)
Translates to: YVLSVQQTASVVYTLIKRIISTL*QSDALW
Trigger: CCACAATGCATCTGACTGCAATAATGTGCTAATAAT...CCTTTTTATCAAAGTGTACACTACTGATGCTGTTTGTTGTACTGAGAGCACGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR CAA 90 bp CTTCAAAGCCCCAAAGCTCTACTATACTCAAATATCAATTCTAGACTGATGATAAAGAGGGTTTCAGTTTaGTCTTGCACGAGTTCATTA +
Preference number: 5 (lower is better)
Translates to: LQSPKALLYSNINSRLMIKRVSV*SCTSSL
Trigger: TAATGAACTCGTGCAAGACAAAACTGAAACCCTCTT...TATCATCAGTCTAGAATTGATATTTGAGTATAGTAGAGCTTTGGGGCTTTGAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR CAA 90 bp GAAAGAGGGTTTCAGTTTTGTCTTGCACGAGTTCATTATTTACTATTCGTTGATGGTTTCAGTTTTGTCTaGCACGAGTTCATTATTTAC +
Preference number: 5 (lower is better)
Translates to: ERGFQFCLARVHYLLFVDGFSFV*HEFIIY
Trigger: GTAAATAATGAACTCGTGCAAGACAAAACTGAAACC...ATCAACGAATAGTAAATAATGAACTCGTGCAAGACAAAACTGAAACCCTCTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS-3UTR CAA 90 bp AAAGACTTAAGGCTTAGGGATTGTTTTACTATCTGGAATTTGCCTAATTTGACCTGGAATTTGCCTAATTaGACCTTCAAAGTTCTTGCA +
Preference number: 5 (lower is better)
Translates to: KDLRLRDCFTIWNLPNLTWNLPN*TFKVLA
Trigger: TGCAAGAACTTTGAAGGTCAAATTAGGCAAATTCCA...GGTCAAATTAGGCAAATTCCAGATAGTAAAACAATCCCTAAGCCTTAAGTCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS CCA 72 bp GCACCATTGGTCCCTAAGGTTAGCGCGGAGAATGCTTaGGTTCCCCGGAGCACAGCAGGGGGAAGTATTAGC +
Preference number: 6 (lower is better)
Translates to: APLVPKVSAENA*VPRSTAGGSIS
Trigger: GCTAATACTTCCCCCTGCTGTGCTCCGGGGAACCCAAGCATTCTCCGCGCTAACCTTAGGGACCAATGGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS GCA 72 bp CACCCATGCAGTATTTGCTGTGCACAGAGCGGTTGGTaGCATCAAGGAGTGGCTGAAGGCAGCGTACAGTGC +
Preference number: 6 (lower is better)
Translates to: HPCSICCAQSGW*HQGVAEGSVQC
Trigger: GCACTGTACGCTGCCTTCAGCCACTCCTTGATGGCACCAACCGCTCTGTGCACAGCAAATACTGCATGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS CCA 72 bp TTTGCTGTGCACAGAGCGGTTGGTGCCATCAAGGAGTaGCTGAAGGCAGCGTACAGTGCGAAGCTGATAGCC +
Preference number: 6 (lower is better)
Translates to: FAVHRAVGAIKE*LKAAYSAKLIA
Trigger: GGCTATCAGCTTCGCACTGTACGCTGCCTTCAGCCACTCCTTGATGGCACCAACCGCTCTGTGCACAGCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS CCA 72 bp GGTCACCCATGCAGTATTTGCTGTGCACAGAGCGGTTaGTGCCATCAAGGAGTGGCTGAAGGCAGCGTACAG +
Preference number: 6 (lower is better)
Translates to: GHPCSICCAQSG*CHQGVAEGSVQ
Trigger: CTGTACGCTGCCTTCAGCCACTCCTTGATGGCACCAACCGCTCTGTGCACAGCAAATACTGCATGGGTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS CAA 90 bp AAGGAAGCAGCAGCCATTTGTGAAGCTGAACTGAGGTGGACCCTCTaGGTGGGTGGGGAGGATGGTACGGTGACCAGTCTCACAGTCTTA +
Preference number: 6 (lower is better)
Translates to: KEAAAICEAELRWTL*VGGEDGTVTSLTVL
Trigger: TAAGACTGTGAGACTGGTCACCGTACCATCCTCCCCACCCACCAAGAGGGTCCACCTCAGTTCAGCTTCACAAATGGCTGCTGCTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS GCA 72 bp GCAGTCTCATCACCACACCTGTTGCCTTGTCCATCATaGTCCATTCCCAACACATGGCCCGTTTCATGGGCT +
Preference number: 6 (lower is better)
Translates to: AVSSPHLLPCPS*SIPNTWPVSWA
Trigger: AGCCCATGAAACGGGCCATGTGTTGGGAATGGAGCATGATGGACAAGGCAACAGGTGTGGTGATGAGACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS GCA 72 bp TGGTGCCATCAAGGAGTGGCTGAAGGCAGCGTACAGTaGGAAGCTGATAGCCAGAACTTCCACAGGTTTTGG +
Preference number: 6 (lower is better)
Translates to: WCHQGVAEGSVQ*EADSQNFHRFW
Trigger: CCAAAACCTGTGGAAGTTCTGGCTATCAGCTTCGCACTGTACGCTGCCTTCAGCCACTCCTTGATGGCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS CCA 72 bp CCCAAAGCAGCTTTTTCGAGGCTTTTCGAGCACCATTaGTCCCTAAGGTTAGCGCGGAGAATGCTTGGGTTC +
Preference number: 6 (lower is better)
Translates to: PKAAFSRLFEHH*SLRLARRMLGF
Trigger: GAACCCAAGCATTCTCCGCGCTAACCTTAGGGACCAATGGTGCTCGAAAAGCCTCGAAAAAGCTGCTTTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS CCA 72 bp GGCCTTCCAGGTCCGACTCTCTGTAGTGGAAGTCTTTaGACATGTCTATGGGAGCCTGTTCTACAGCTGATC +
Preference number: 6 (lower is better)
Translates to: GLPGPTLCSGSL*TCLWEPVLQLI
Trigger: GATCAGCTGTAGAACAGGCTCCCATAGACATGTCCAAAGACTTCCACTACAGAGAGTCGGACCTGGAAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS CAA 72 bp GCCCAAAGCAGCTTTTTCGAGGCTTTTCGAGCACCATaGGTCCCTAAGGTTAGCGCGGAGAATGCTTGGGTT +
Preference number: 6 (lower is better)
Translates to: AQSSFFEAFRAP*VPKVSAENAWV
Trigger: AACCCAAGCATTCTCCGCGCTAACCTTAGGGACCAATGGTGCTCGAAAAGCCTCGAAAAAGCTGCTTTGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286657.10
CDS TCA 72 bp CCTAACCTCTACCAGAGCGGCTGCTATCAACCAAAGTaGCAGGAGAACCATCACGAGTCGAGTTCACTTTCC +
Preference number: 6 (lower is better)
Translates to: PNLYQSGCYQPK*QENHHESSSLS
Trigger: GGAAAGTGAACTCGACTCGTGATGGTTCTCCTGTCACTTTGGTTGATAGCAGCCGCTCTGGTAGAGGTTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS TCA 72 bp GAACAACTGCTCAGGGTTGGAAGACACGTCCCTCGCTaGCCTCTTTTTGTGACTCGCAGAAAGAGTATGGGA +
Preference number: 6 (lower is better)
Translates to: EQLLRVGRHVPR*PLFVTRRKSMG
Trigger: TCCCATACTCTTTCTGCGAGTCACAAAAAGAGGTCAGCGAGGGACGTGTCTTCCAACCCTGAGCAGTTGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286657.10
ENST00000505193.1
ENST00000622135.1
CDS TCA 72 bp ATGGTTCATCATTACAAGGAGGCAGTTGACAGGCTCTaGCCGACTCAGGCTTTTCACCATCACAGTGGTCCC +
Preference number: 6 (lower is better)
Translates to: MVHHYKEAVDRL*PTQAFHHHSGP
Trigger: GGGACCACTGTGATGGTGAAAAGCCTGAGTCGGTCAGAGCCTGTCAACTGCCTCCTTGTAATGATGAACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS TCA 72 bp ACGGTGACCAGTCTCACAGTCTTACTTCCTGCTTGCTaGGCACTCCTCTGGCGTAAATTAGCACCATCAGGT +
Preference number: 6 (lower is better)
Translates to: TVTSLTVLLPAC*ALLWRKLAPSG
Trigger: ACCTGATGGTGCTAATTTACGCCAGAGGAGTGCTCAGCAAGCAGGAAGTAAGACTGTGAGACTGGTCACCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS GCA 72 bp TTTCAGCAGCTTCTAGAAGGTATGGTGGTGGCAGGGTaGTACTGCGCTTGCTGCAGGACTCACAACATAACT +
Preference number: 6 (lower is better)
Translates to: FQQLLEGMVVAG*YCACCRTHNIT
Trigger: AGTTATGTTGTGAGTCCTGCAGCAAGCGCAGTAGCACCCTGCCACCACCATACCTTCTAGAAGCTGCTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS CCA 72 bp CAGTGCGAAGCTGATAGCCAGAACTTCCACAGGTTTTaGTGCAGTGTTCCCATTCTTCTGCTACCCAGAGTG +
Preference number: 6 (lower is better)
Translates to: QCEADSQNFHRF*CSVPILLLPRV
Trigger: CACTCTGGGTAGCAGAAGAATGGGAACACTGCACCAAAACCTGTGGAAGTTCTGGCTATCAGCTTCGCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS CAA 72 bp CTCACAGGTGTGATGACAGAGTTCAGACCATCACAGTaGCTGATGGCAACAGAGGTTCCTGGAATGTCCACG +
Preference number: 6 (lower is better)
Translates to: LTGVMTEFRPSQ*LMATEVPGMST
Trigger: CGTGGACATTCCAGGAACCTCTGTTGCCATCAGCAACTGTGATGGTCTGAACTCTGTCATCACACCTGTGAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505193.1
CDS CAA 90 bp CTAGAGTGTCTCACAGGTGTGATGACAGAGTTCAGACCATCACAGTaGCTGATGGCAACAGAGGTTCCTGGAATGTCCACGATGTCACCA +
Preference number: 6 (lower is better)
Translates to: LECLTGVMTEFRPSQ*LMATEVPGMSTMSP
Trigger: TGGTGACATCGTGGACATTCCAGGAACCTCTGTTGCCATCAGCAACTGTGATGGTCTGAACTCTGTCATCACACCTGTGAGACACTCTAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505193.1
CDS GCA 72 bp GTACCTCGATATTGTAATCGTTTTCTCCCGCGTGTCTaGGGCGTCTCATTGTTTCATTCAGCTGCTGGTGGA +
Preference number: 6 (lower is better)
Translates to: VPRYCNRFLPRV*GVSLFHSAAGG
Trigger: TCCACCAGCAGCTGAATGAAACAATGAGACGCCGCAGACACGCGGGAGAAAACGATTACAATATCGAGGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS GCA 72 bp GAAGGTATGGTGGTGGCAGGGTGCTACTGCGCTTGCTaGAGGACTCACAACATAACTTGTTATAACCTGGTA +
Preference number: 6 (lower is better)
Translates to: EGMVVAGCYCAC*RTHNITCYNLV
Trigger: TACCAGGTTATAACAAGTTATGTTGTGAGTCCTGCAGCAAGCGCAGTAGCACCCTGCCACCACCATACCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS GCA 72 bp CTAGAAGGTATGGTGGTGGCAGGGTGCTACTGCGCTTaGTGCAGGACTCACAACATAACTTGTTATAACCTG +
Preference number: 6 (lower is better)
Translates to: LEGMVVAGCYCA*CRTHNITCYNL
Trigger: CAGGTTATAACAAGTTATGTTGTGAGTCCTGCAGCAAGCGCAGTAGCACCCTGCCACCACCATACCTTCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS GCA 72 bp CAGCTTCTAGAAGGTATGGTGGTGGCAGGGTGCTACTaGGCTTGCTGCAGGACTCACAACATAACTTGTTAT +
Preference number: 6 (lower is better)
Translates to: QLLEGMVVAGCY*ACCRTHNITCY
Trigger: ATAACAAGTTATGTTGTGAGTCCTGCAGCAAGCGCAGTAGCACCCTGCCACCACCATACCTTCTAGAAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS CCA 72 bp CTGCAACTCCAGCCATCATGTTTTCTCTGGGTTCTATaGGTCAGGATTTCAGAGAGGCACAATGCAGATGGC +
Preference number: 6 (lower is better)
Translates to: LQLQPSCFLWVL*VRISERHNADG
Trigger: GCCATCTGCATTGTGCCTCTCTGAAATCCTGACCCATAGAACCCAGAGAAAACATGATGGCTGGAGTTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505193.1
CDS CAA 72 bp ATGGTGTTCAGAGTGGTTGAGATCAGATCTTTGCTGTaGGGACGCCCAGCGACACACATTCTCCAAGCTTCT +
Preference number: 6 (lower is better)
Translates to: MVFRVVEIRSLL*GRPATHILQAS
Trigger: AGAAGCTTGGAGAATGTGTGTCGCTGGGCGTCCCAACAGCAAAGATCTGATCTCAACCACTCTGAACACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS CAA 72 bp GTCTCCCAAACATGGTTCATCATTACAAGGAGGCAGTaGACAGGCTCTGACCGACTCAGGCTTTTCACCATC +
Preference number: 6 (lower is better)
Translates to: VSQTWFIITRRQ*TGSDRLRLFTI
Trigger: GATGGTGAAAAGCCTGAGTCGGTCAGAGCCTGTCAACTGCCTCCTTGTAATGATGAACCATGTTTGGGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS TCA 72 bp GTGTACTGGAAACCTCCACCACAGGGTTTGGAACACTaGGACCAGCTCTTCAAAGCCCACTCAAAAGTATCT +
Preference number: 6 (lower is better)
Translates to: VYWKPPPQGLEH*DQLFKAHSKVS
Trigger: AGATACTTTTGAGTGGGCTTTGAAGAGCTGGTCTCAGTGTTCCAAACCCTGTGGTGGAGGTTTCCAGTACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS TCA 72 bp TCTCCCAAACATGGTTCATCATTACAAGGAGGCAGTTaGCAGGCTCTGACCGACTCAGGCTTTTCACCATCA +
Preference number: 6 (lower is better)
Translates to: SPKHGSSLQGGS*QALTDSGFSPS
Trigger: TGATGGTGAAAAGCCTGAGTCGGTCAGAGCCTGTCAACTGCCTCCTTGTAATGATGAACCATGTTTGGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS GCA 72 bp CTGGGTTCTATGGGTCAGGATTTCAGAGAGGCACAATaGAGATGGCTTCTCTTTGCTCCACAATGTCTGAAG +
Preference number: 6 (lower is better)
Translates to: LGSMGQDFREAQ*RWLLFAPQCLK
Trigger: CTTCAGACATTGTGGAGCAAAGAGAAGCCATCTGCATTGTGCCTCTCTGAAATCCTGACCCATAGAACCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505193.1
CDS CCA 72 bp CAGACCATCACAGTTGCTGATGGCAACAGAGGTTCCTaGAATGTCCACGATGTCACCAACATAAGCACAGTT +
Preference number: 6 (lower is better)
Translates to: QTITVADGNRGS*NVHDVTNISTV
Trigger: AACTGTGCTTATGTTGGTGACATCGTGGACATTCCAGGAACCTCTGTTGCCATCAGCAACTGTGATGGTCTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286657.10
ENST00000505193.1
ENST00000622135.1
CDS CAA 72 bp TGTAATCGTTTTCTCCCGCGTGTCTGCGGCGTCTCATaGTTTCATTCAGCTGCTGGTGGATGTTGCCATAAA +
Preference number: 6 (lower is better)
Translates to: CNRFLPRVCGVS*FHSAAGGCCHK
Trigger: TTTATGGCAACATCCACCAGCAGCTGAATGAAACAATGAGACGCCGCAGACACGCGGGAGAAAACGATTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS CAA 90 bp CTGCAAAGGCTCTGTTCTCCGGATTCTATACGTAGCACTTCCTGGTaGATGGTTGTTAATGGGATCGGTTATATTCCCAGGCACCAGAGA +
Preference number: 6 (lower is better)
Translates to: LQRLCSPDSIRSTSW*MVVNGIGYIPRHQR
Trigger: TCTCTGGTGCCTGGGAATATAACCGATCCCATTAACAACCATCAACCAGGAAGTGCTACGTATAGAATCCGGAGAACAGAGCCTTTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286657.10
ENST00000505193.1
ENST00000622135.1
CDS CAA 90 bp CCTCGATATTGTAATCGTTTTCTCCCGCGTGTCTGCGGCGTCTCATaGTTTCATTCAGCTGCTGGTGGATGTTGCCATAAACAGTACCTA +
Preference number: 6 (lower is better)
Translates to: PRYCNRFLPRVCGVS*FHSAAGGCCHKQYL
Trigger: TAGGTACTGTTTATGGCAACATCCACCAGCAGCTGAATGAAACAATGAGACGCCGCAGACACGCGGGAGAAAACGATTACAATATCGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS TCA 72 bp CACTTTTTATCATTCCAGCCAGACCATCACAGTTGCTaGTGGCAACAGAGGTTCCTGGAATGTCCACGATGT +
Preference number: 6 (lower is better)
Translates to: HFLSFQPDHHSC*WQQRFLECPRC
Trigger: ACATCGTGGACATTCCAGGAACCTCTGTTGCCATCAGCAACTGTGATGGTCTGGCTGGAATGATAAAAAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS TCA 72 bp CAAAGTGGGAGTTTCGCTGCTGACACTGCTGTGCTCTaGAGTCCTCAAAGTGTTTTTGGCATTCTTCTGTGT +
Preference number: 6 (lower is better)
Translates to: QSGSFAADTAVL*SPQSVFGILLC
Trigger: ACACAGAAGAATGCCAAAAACACTTTGAGGACTTCAGAGCACAGCAGTGTCAGCAGCGAAACTCCCACTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS TCA 72 bp GTTCAATGGTTACCTCCACCACAGGGTTTGGAACACTaGGACCAGCTCTTCAAAGCCCACTCAAAAGTATCT +
Preference number: 6 (lower is better)
Translates to: VQWLPPPQGLEH*DQLFKAHSKVS
Trigger: AGATACTTTTGAGTGGGCTTTGAAGAGCTGGTCTCAGTGTTCCAAACCCTGTGGTGGAGGTAACCATTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511274.1
CDS GCA 72 bp GGCGTCTCATTGTTTCATTCAGCTGCTGGTGGATGTTaGCATAAACAGTACCTAGATCATCAAGGCCTTCCA +
Preference number: 6 (lower is better)
Translates to: GVSLFHSAAGGC*HKQYLDHQGLP
Trigger: TGGAAGGCCTTGATGATCTAGGTACTGTTTATGGCAACATCCACCAGCAGCTGAATGAAACAATGAGACGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS CCA 72 bp CCGACTCTCTGTAGTGGAAGTCTTTGGACATGTCTATaGGAGCCTGTTCTACAGCTGATCTCTTGTAGACAA +
Preference number: 6 (lower is better)
Translates to: PTLCSGSLWTCL*EPVLQLISCRQ
Trigger: TTGTCTACAAGAGATCAGCTGTAGAACAGGCTCCCATAGACATGTCCAAAGACTTCCACTACAGAGAGTCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS CCA 72 bp TGGGGTCAGGATGTTCATATGGCAACCAGTGGTGTTTaGTATTCTGGTATTCAAAGTGGGAGTTTCGCTGCT +
Preference number: 6 (lower is better)
Translates to: WGQDVHMATSGV*YSGIQSGSFAA
Trigger: AGCAGCGAAACTCCCACTTTGAATACCAGAATACCAAACACCACTGGTTGCCATATGAACATCCTGACCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS CCA 72 bp AGGTTCTTGCCTGAGAAGAAGCACCTATTGAATCACTaGCTGCAAAGAAGGAAGCAGCAGCCATTTGTGAAG +
Preference number: 6 (lower is better)
Translates to: RFLPEKKHLLNH*LQRRKQQPFVK
Trigger: CTTCACAAATGGCTGCTGCTTCCTTCTTTGCAGCCAGTGATTCAATAGGTGCTTCTTCTCAGGCAAGAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS CCA 72 bp TCTATGGGTCAGGATTTCAGAGAGGCACAATGCAGATaGCTTCTCTTTGCTCCACAATGTCTGAAGACTAGC +
Preference number: 6 (lower is better)
Translates to: SMGQDFREAQCR*LLFAPQCLKTS
Trigger: GCTAGTCTTCAGACATTGTGGAGCAAAGAGAAGCCATCTGCATTGTGCCTCTCTGAAATCCTGACCCATAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505193.1
CDS CAA 72 bp TTGGGGTCAGGATGTTCATATGGCAACCAGTGGTGTTaGGTATTCTGGTATTCAAAGTGGGAGTTTCGCTGC +
Preference number: 6 (lower is better)
Translates to: LGSGCSYGNQWC*VFWYSKWEFRC
Trigger: GCAGCGAAACTCCCACTTTGAATACCAGAATACCAAACACCACTGGTTGCCATATGAACATCCTGACCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS TCA 72 bp CAAAGCTGGTACTCAAAATTAACACCAGGACAATCCTaGCCACCATTGATGGGCATGGGATTATTGCACTGG +
Preference number: 6 (lower is better)
Translates to: QSWYSKLTPGQS*PPLMGMGLLHW
Trigger: CCAGTGCAATAATCCCATGCCCATCAATGGTGGTCAGGATTGTCCTGGTGTTAATTTTGAGTACCAGCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS GCA 72 bp GTATTCAAAGTGGGAGTTTCGCTGCTGACACTGCTGTaGTCTGAAGTCCTCAAAGTGTTTTTGGCATTCTTC +
Preference number: 6 (lower is better)
Translates to: VFKVGVSLLTLL*SEVLKVFLAFF
Trigger: GAAGAATGCCAAAAACACTTTGAGGACTTCAGAGCACAGCAGTGTCAGCAGCGAAACTCCCACTTTGAATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS CCA 72 bp AGGCTCTGTTCTCCGGATTCTATACGTAGCACTTCCTaGTTGATGGTTGTTAATGGGATCGGTTATATTCCC +
Preference number: 6 (lower is better)
Translates to: RLCSPDSIRSTS*LMVVNGIGYIP
Trigger: GGGAATATAACCGATCCCATTAACAACCATCAACCAGGAAGTGCTACGTATAGAATCCGGAGAACAGAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286657.10
ENST00000505193.1
ENST00000622135.1
CDS CCA 72 bp ATAAATGTGTTCAATGGTTACCTCCACCACAGGGTTTaGAACACTGAGACCAGCTCTTCAAAGCCCACTCAA +
Preference number: 6 (lower is better)
Translates to: INVFNGYLHHRV*NTETSSSKPTQ
Trigger: TTGAGTGGGCTTTGAAGAGCTGGTCTCAGTGTTCCAAACCCTGTGGTGGAGGTAACCATTGAACACATTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511274.1
CDS CAA 72 bp TTATCACTTTTTATCATTCCAGCCAGACCATCACAGTaGCTGATGGCAACAGAGGTTCCTGGAATGTCCACG +
Preference number: 6 (lower is better)
Translates to: LSLFIIPARPSQ*LMATEVPGMST
Trigger: CGTGGACATTCCAGGAACCTCTGTTGCCATCAGCAACTGTGATGGTCTGGCTGGAATGATAAAAAGTGATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS CAA 72 bp GGTCTAGGAACATTTAGTGGATTCTCATGCACATGTTaGGCACCTGGGCTAGGATATCTCAAGGACTTGCTT +
Preference number: 6 (lower is better)
Translates to: GLGTFSGFSCTC*APGLGYLKDLL
Trigger: AAGCAAGTCCTTGAGATATCCTAGCCCAGGTGCCAAACATGTGCATGAGAATCCACTAAATGTTCCTAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505193.1
CDS GCA 72 bp ATTCACAGCCTTTCCCCACACAGAACCATCTGCTGGTaGTCTCCAACAATATTAACATTAAAAGGGAAGCCT +
Preference number: 6 (lower is better)
Translates to: IHSLSPHRTICW*SPTILTLKGKP
Trigger: AGGCTTCCCTTTTAATGTTAATATTGTTGGAGAGCACCAGCAGATGGTTCTGTGTGGGGAAAGGCTGTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505193.1
CDS CCA 72 bp CACCATGGGAAGAGAGAGGTTGTCCAGGTTTTCCTCTaGTTTCTAGCCTTTTTGGTTCACTTTCTCATCTTT +
Preference number: 6 (lower is better)
Translates to: HHGKREVVQVFL*FLAFLVHFLIF
Trigger: AAAGATGAGAAAGTGAACCAAAAAGGCTAGAAACCAGAGGAAAACCTGGACAACCTCTCTCTTCCCATGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS CAA 90 bp GTTTCGCTGCTGACACTGCTGTGCTCTGAAGTCCTCAAAGTGTTTTaGGCATTCTTCTGTGTTACAAAGCTGGTACTCAAAATTAACACC +
Preference number: 6 (lower is better)
Translates to: VSLLTLLCSEVLKVF*AFFCVTKLVLKINT
Trigger: GGTGTTAATTTTGAGTACCAGCTTTGTAACACAGAAGAATGCCAAAAACACTTTGAGGACTTCAGAGCACAGCAGTGTCAGCAGCGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS TCA 72 bp GTCTTTGGACATGTCTATGGGAGCCTGTTCTACAGCTaGTCTCTTGTAGACAACATGAATCCTTCCTTTTTC +
Preference number: 6 (lower is better)
Translates to: VFGHVYGSLFYS*SLVDNMNPSFF
Trigger: GAAAAAGGAAGGATTCATGTTGTCTACAAGAGATCAGCTGTAGAACAGGCTCCCATAGACATGTCCAAAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS CCA 72 bp AAGGTGGCATCTTTTCTTGGGGTCAGGATGTTCATATaGCAACCAGTGGTGTTTGGTATTCTGGTATTCAAA +
Preference number: 6 (lower is better)
Translates to: KVASFLGVRMFI*QPVVFGILVFK
Trigger: TTTGAATACCAGAATACCAAACACCACTGGTTGCCATATGAACATCCTGACCCCAAGAAAAGATGCCACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS CAA 72 bp CTGACACTGCTGTGCTCTGAAGTCCTCAAAGTGTTTTaGGCATTCTTCTGTGTTACAAAGCTGGTACTCAAA +
Preference number: 6 (lower is better)
Translates to: LTLLCSEVLKVF*AFFCVTKLVLK
Trigger: TTTGAGTACCAGCTTTGTAACACAGAAGAATGCCAAAAACACTTTGAGGACTTCAGAGCACAGCAGTGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS CAA 72 bp CCATTCTTCTGCTACCCAGAGTGGATGTGTACACTCTaGAATATTGCACATTCGTCTAATAGGTTTCGGCTT +
Preference number: 6 (lower is better)
Translates to: PFFCYPEWMCTL*NIAHSSNRFRL
Trigger: AAGCCGAAACCTATTAGACGAATGTGCAATATTCAAGAGTGTACACATCCACTCTGGGTAGCAGAAGAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS TCA 72 bp CATTCTTCTGCTACCCAGAGTGGATGTGTACACTCTTaGATATTGCACATTCGTCTAATAGGTTTCGGCTTT +
Preference number: 6 (lower is better)
Translates to: HSSATQSGCVHS*ILHIRLIGFGF
Trigger: AAAGCCGAAACCTATTAGACGAATGTGCAATATTCAAGAGTGTACACATCCACTCTGGGTAGCAGAAGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS CCA 72 bp AATATTCACAGCCTTTCCCCACACAGAACCATCTGCTaGTGCTCTCCAACAATATTAACATTAAAAGGGAAG +
Preference number: 6 (lower is better)
Translates to: NIHSLSPHRTIC*CSPTILTLKGK
Trigger: CTTCCCTTTTAATGTTAATATTGTTGGAGAGCACCAGCAGATGGTTCTGTGTGGGGAAAGGCTGTGAATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505193.1
CDS CAA 90 bp CTCTTCAAAGCCCACTCAAAAGTATCTAATTCTTCCTGGATGACATaGTTGCTGTTGATTGTAGGTACAGAGTCTTCATGGATGATGTAC +
Preference number: 6 (lower is better)
Translates to: LFKAHSKVSNSSWMT*LLLIVGTESSWMMY
Trigger: GTACATCATCCATGAAGACTCTGTACCTACAATCAACAGCAACAATGTCATCCAGGAAGAATTAGATACTTTTGAGTGGGCTTTGAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286657.10
ENST00000511274.1
ENST00000622135.1
CDS GCA 72 bp TTAAATATTCACAGCCTTTCCCCACACAGAACCATCTaGTGGTGCTCTCCAACAATATTAACATTAAAAGGG +
Preference number: 6 (lower is better)
Translates to: LNIHSLSPHRTI*WCSPTILTLKG
Trigger: CCCTTTTAATGTTAATATTGTTGGAGAGCACCAGCAGATGGTTCTGTGTGGGGAAAGGCTGTGAATATTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505193.1
CDS CAA 72 bp ATATTGCACATTCGTCTAATAGGTTTCGGCTTTTTGTaGGCCTCACAGAAGCTGCGATGGACCATTTTATTA +
Preference number: 6 (lower is better)
Translates to: ILHIRLIGFGFL*ASQKLRWTILL
Trigger: TAATAAAATGGTCCATCGCAGCTTCTGTGAGGCCAACAAAAAGCCGAAACCTATTAGACGAATGTGCAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS CAA 72 bp CATCTTTCTAAGGTGGATGATCTTGTCGGACGTCTGTaGTCAATGATCTTTCCATCTTTCTTTGAGGTTCTT +
Preference number: 6 (lower is better)
Translates to: HLSKVDDLVGRL*SMIFPSFFEVL
Trigger: AAGAACCTCAAAGAAAGATGGAAAGATCATTGACAACAGACGTCCGACAAGATCATCCACCTTAGAAAGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286657.10
ENST00000622135.1
CDS CAA 72 bp CACTCAAAAGTATCTAATTCTTCCTGGATGACATTGTaGCTGTTGATTGTAGGTACAGAGTCTTCATGGATG +
Preference number: 6 (lower is better)
Translates to: HSKVSNSSWMTL*LLIVGTESSWM
Trigger: CATCCATGAAGACTCTGTACCTACAATCAACAGCAACAATGTCATCCAGGAAGAATTAGATACTTTTGAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286657.10
ENST00000511274.1
ENST00000622135.1
CDS CAA 90 bp TTCAAAGCCCACTCAAAAGTATCTAATTCTTCCTGGATGACATTGTaGCTGTTGATTGTAGGTACAGAGTCTTCATGGATGATGTACTTA +
Preference number: 6 (lower is better)
Translates to: FKAHSKVSNSSWMTL*LLIVGTESSWMMYL
Trigger: TAAGTACATCATCCATGAAGACTCTGTACCTACAATCAACAGCAACAATGTCATCCAGGAAGAATTAGATACTTTTGAGTGGGCTTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286657.10
ENST00000511274.1
ENST00000622135.1