RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADAMTS20 (Homo sapiens)

Ensembl gene IDs: ENSG00000173157

Ensembl transcript IDs: ENST00000389420.8, ENST00000395541.3, ENST00000549670.5, ENST00000553158.5

Found 377 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGTGGACCATAGTTTGCTaGCCTCTAAAACAGAGAATC +
Preference number: 2 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTWTIVC*PLKQRI
Trigger: GATTCTCTGTTTTAGAGGTCAGCAAACTATGGTCCA...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549670.5
3UTR-3UTR TCA 90 bp TATAAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATGACCTTATTAAGCAGTaGTTTGAATCCCTGATGAGC +
Preference number: 2 (lower is better)
Translates to: YKISVVQAKMLRATLSWYDLIKQ*FESLMS
Trigger: GCTCATCAGGGATTCAAATCACTGCTTAATAAGGTC...ATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
3UTR-3UTR CCA 90 bp GCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCAATCCTGGTATTGAGACATATTGGACATaGAAATCTCGGGAAGGGAGA +
Preference number: 2 (lower is better)
Translates to: AKMLRATLSWYNSFNPGIETYWT*KSREGR
Trigger: TCTCCCTTCCCGAGATTTCCATGTCCAATATGTCTC...AATACCAGGATTGAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
3UTR-3UTR CAA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGTACCTGGACCATAGTTaGCTGACCTCTAAAACAGAG +
Preference number: 3 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTYLDHS*LTSKTE
Trigger: CTCTGTTTTAGAGGTCAGCAAACTATGGTCCAGGTA...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549670.5
3UTR-3UTR CAA 90 bp GCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCAATCCTGGTATTAAAGGCAGAGACATATaGGACATGGAAATCTCGGGA +
Preference number: 3 (lower is better)
Translates to: AKMLRATLSWYNSFNPGIKGRDI*DMEISG
Trigger: TCCCGAGATTTCCATGTCCAATATGTCTCTGCCTTT...AATACCAGGATTGAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
3UTR CCA 72 bp GTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTaGTATAATTCATTCAATCCTGGTATTCTCTATTAT +
Preference number: 3 (lower is better)
Translates to: VVQAKMLRATLS*YNSFNPGILYY
Trigger: ATAATAGAGAATACCAGGATTGAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCAC
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
3UTR GCA 72 bp TTTGTGAGTTACAGAGTTTCTATTGCAACTAATCAATaGTACTGCTGTAGTGCAAAACCAGCCATAGATAAC +
Preference number: 3 (lower is better)
Translates to: FVSYRVSIATNQ*YCCSAKPAIDN
Trigger: GTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAATAGAAACTCTGTAACTCACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR CCA 90 bp TATAGGTATAAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTGGGCCCTGGGCCGGCTaGTCCAGCCACACCGCCTGT +
Preference number: 4 (lower is better)
Translates to: YRYKISVVQAKMLRATLSGPWAG*SSHTAC
Trigger: ACAGGCGGTGTGGCTGGACCAGCCGGCCCAGGGCCC...AGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTTATACCTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CCA 90 bp AGGTATAAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGGGGTTCGGAACGGCATaGGTTCCAGCGCCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: RYKISVVQAKMLRATLSWGFGTA*VPAPRS
Trigger: GCTCCGAGGCGCTGGAACCCATGCCGTTCCGAACCC...CCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTTATACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR GCA 90 bp AAATCTCGGGAAGGGAGATATAAAGAAATGAGCACCAGTTATTTGAATATTCCACAGGTCCGAGGGCCCTaGGTCGCTCTCCCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: KSREGRYKEMSTSYLNIPQVRGP*VALPGP
Trigger: GGGGCCTGGGAGAGCGACGCAGGGCCCTCGGACCTG...TGGAATATTCAAATAACTGGTGCTCATTTCTTTATATCTCCCTTCCCGAGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp TATAAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATCCTGTCTCCGCTCGCTaGGCCGCTGCTTCATCGCAC +
Preference number: 4 (lower is better)
Translates to: YKISVVQAKMLRATLSWYPVSAR*AAASSH
Trigger: GTGCGATGAAGCAGCGGCTCAGCGAGCGGAGACAGG...ATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CCA 90 bp AGGTATAAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGGCCCAGTCAGCCACTTaGCCACCCACATGGTTCCAC +
Preference number: 4 (lower is better)
Translates to: RYKISVVQAKMLRATLSWAQSAT*PPTWFH
Trigger: GTGGAACCATGTGGGTGGCCAAGTGGCTGACTGGGC...CCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTTATACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR GCA 90 bp TCTCGGGAAGGGAGATATAAAGAAATGAGCACCAGTTATTTGAATATTCCAGAGCGCTCGCTGAGCCGCTaGTTCATCGCACTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: SREGRYKEMSTSYLNIPERSLSR*FIALQP
Trigger: AGGCTGCAGTGCGATGAAGCAGCGGCTCAGCGAGCG...CTCTGGAATATTCAAATAACTGGTGCTCATTTCTTTATATCTCCCTTCCCGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR GCA 90 bp AGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCTGCAGGAGGGCAGGCTaGCAGGCTACATTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: SVVQAKMLRATLSWYNSFCRRAG*QATFLF
Trigger: GAACAGGAATGTAGCCTGGCAGCCTGCCCTCCTGCA...GAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CCA 90 bp AGGTATAAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGGGGGAACTAGGAAAGTaGCTGTGTGCAGGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: RYKISVVQAKMLRATLSWGELGK*LCAGGQ
Trigger: CTGCCCTCCTGCACACAGCCACTTTCCTAGTTCCCC...CCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTTATACCT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp TATAGGTATAAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGCGTTTCTGCCGGCTaGAGTGGTGGCTCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: YRYKISVVQAKMLRATLSCVSAG*SGGSEG
Trigger: TCCCTCAGAGCCACCACTTCAGCCGGCAGAAACGCA...AGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTTATACCTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp AGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCTGGTTCCTGATGCCATaGCACATCAGCAGGGCAAGC +
Preference number: 4 (lower is better)
Translates to: SVVQAKMLRATLSWYNSFWFLMP*HISRAS
Trigger: GCTTGCCCTGCTGATGTGTCATGGCATCAGGAACCA...GAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR GCA 90 bp TATAAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATTTCCTGCGCCCGCGCTaGCCTCAGAAACTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: YKISVVQAKMLRATLSWYFLRPR*PQKLSA
Trigger: AGCAGAGAGTTTCTGAGGGCAGCGCGGGCGCAGGAA...ATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR GCA 90 bp TATAGGTATAAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTCGGAGCTGCGTTTCTaGCGGCTGAAGTGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: YRYKISVVQAKMLRATLSSELRF*RLKWWL
Trigger: GAGCCACCACTTCAGCCGGCAGAAACGCAGCTCCGA...AGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTTATACCTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR GCA 90 bp TCTCGGGAAGGGAGATATAAAGAAATGAGCACCAGTTATTTGAATATTCCAGAGGGCGGCCAGAAAGGATaGATCGGCGGTCAGGTTCAG +
Preference number: 4 (lower is better)
Translates to: SREGRYKEMSTSYLNIPEGGQKG*IGGQVQ
Trigger: CTGAACCTGACCGCCGATGCATCCTTTCTGGCCGCC...CTCTGGAATATTCAAATAACTGGTGCTCATTTCTTTATATCTCCCTTCCCGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR GCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGTGCAGGAGGGCAGGCTaGCAGGCTACATTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTCRRAG*QATFLF
Trigger: GAACAGGAATGTAGCCTGGCAGCCTGCCCTCCTGCA...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR CCA 90 bp AAATCTCGGGAAGGGAGATATAAAGAAATGAGCACCAGTTATTTGAATATTCCACACATGGTTCCACCCTaGGGACCCCGATCGGGGAGG +
Preference number: 4 (lower is better)
Translates to: KSREGRYKEMSTSYLNIPHMVPP*GPRSGR
Trigger: CCTCCCCGATCGGGGTCCCCAGGGTGGAACCATGTG...TGGAATATTCAAATAACTGGTGCTCATTTCTTTATATCTCCCTTCCCGAGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CCA 90 bp AGGTATAAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGGGTACAGCCTTCCCATaGTCCATAGGGGTCCCATGT +
Preference number: 4 (lower is better)
Translates to: RYKISVVQAKMLRATLSWGTAFP*SIGVPC
Trigger: ACATGGGACCCCTATGGACCATGGGAAGGCTGTACC...CCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTTATACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGGGGGAACTAGGAAAGTaGCTGTGTGCAGGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTGELGK*LCAGGQ
Trigger: CTGCCCTCCTGCACACAGCCACTTTCCTAGTTCCCC...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR TCA 90 bp AGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCCTGAAGTGGTGGCTCTaGGGGAACACTTCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: SVVQAKMLRATLSWYNSFLKWWL*GNTSPN
Trigger: GTTTGGAGAAGTGTTCCCTCAGAGCCACCACTTCAG...GAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp TCTCGGGAAGGGAGATATAAAGAAATGAGCACCAGTTATTTGAATATTCCAGAGAATCCTCCTGTGAGTTaGCCTGGCCGCGGTAGAAGC +
Preference number: 4 (lower is better)
Translates to: SREGRYKEMSTSYLNIPENPPVS*PGRGRS
Trigger: GCTTCTACCGCGGCCAGGTCAACTCACAGGAGGATT...CTCTGGAATATTCAAATAACTGGTGCTCATTTCTTTATATCTCCCTTCCCGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp AAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATGGCCTCCGCATAAGCTaGCGACGGCCTTGTAATCCT +
Preference number: 4 (lower is better)
Translates to: KISVVQAKMLRATLSWYNGLRIS*RRPCNP
Trigger: AGGATTACAAGGCCGTCGTCAGCTTATGCGGAGGCC...ATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp AGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCATGGGGACACATTTGTaGCCCAGGACCAAACGCAAG +
Preference number: 4 (lower is better)
Translates to: SVVQAKMLRATLSWYNSFMGTHL*PRTKRK
Trigger: CTTGCGTTTGGTCCTGGGTCACAAATGTGTCCCCAT...GAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGACAACTGCTGGAGCATaGTCCCCATGGTCCGGTTCT +
Preference number: 4 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTTTAGA*SPWSGS
Trigger: AGAACCGGACCATGGGGATCATGCTCCAGCAGTTGT...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR TCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGTGGTTCCTGATGCCATaGCACATCAGCAGGGCAAGC +
Preference number: 4 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTWFLMP*HISRAS
Trigger: GCTTGCCCTGCTGATGTGTCATGGCATCAGGAACCA...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR TCA 90 bp TCTCGGGAAGGGAGATATAAAGAAATGAGCACCAGTTATTTGAATATTCCAGAGCTCCAACATCGCCTCTaGGAACAAGGTCGGGTGGAC +
Preference number: 4 (lower is better)
Translates to: SREGRYKEMSTSYLNIPELQHRL*EQGRVD
Trigger: GTCCACCCGACCTTGTTCTCAGAGGCGATGTTGGAG...CTCTGGAATATTCAAATAACTGGTGCTCATTTCTTTATATCTCCCTTCCCGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR GCA 90 bp AGGTATAAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGGCAGTCTGTTCCATCTaGTGGTGGCACGTGTTGAGT +
Preference number: 4 (lower is better)
Translates to: RYKISVVQAKMLRATLSWAVCSI*WWHVLS
Trigger: ACTCAACACGTGCCACCAGCAGATGGAACAGACTGC...CCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTTATACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR GCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGGGCCCTGGACCACATTaGTGTAACTCTGGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTGPGPH*CNSGGL
Trigger: CAAGCCTCCAGAGTTACAGCAATGTGGTCCAGGGCC...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR CCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGGGTACAGCCTTCCCATaGTCCATAGGGGTCCCATGT +
Preference number: 4 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTGTAFP*SIGVPC
Trigger: ACATGGGACCCCTATGGACCATGGGAAGGCTGTACC...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR CCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGTGTGCAAGGACCCCATaGTCCTACTTGCCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTCARTP*SYLPGS
Trigger: GCTTCCTGGCAAGTAGGACCATGGGGTCCTTGCACA...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR CCA 90 bp AGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCGGTCCGGTTCTCCACTaGTTTCCTCTGACTGATGGA +
Preference number: 4 (lower is better)
Translates to: SVVQAKMLRATLSWYNSFGPVLH*FPLTDG
Trigger: TCCATCAGTCAGAGGAAACCAGTGGAGAACCGGACC...GAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CCA 90 bp AGGTATAAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGGTAACTCTGGAGGCTTaGAGGCTGCATCGCAGTAAC +
Preference number: 4 (lower is better)
Translates to: RYKISVVQAKMLRATLSWVTLEA*RLHRSN
Trigger: GTTACTGCGATGCAGCCTCCAAGCCTCCAGAGTTAC...CCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTTATACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGTCCGTAGTTCCACTGTaGACAAGGCCCTGGACCACA +
Preference number: 4 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTSVVPL*TRPWTT
Trigger: TGTGGTCCAGGGCCTTGTCCACAGTGGAACTACGGA...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR TCA 90 bp AAATCTCGGGAAGGGAGATATAAAGAAATGAGCACCAGTTATTTGAATATTCCAGCTGCCCGTAGGCAGTaGAGCGATAGTGGGTTCGGA +
Preference number: 4 (lower is better)
Translates to: KSREGRYKEMSTSYLNIPAARRQ*SDSGFG
Trigger: TCCGAACCCACTATCGCTTCACTGCCTACGGGCAGC...TGGAATATTCAAATAACTGGTGCTCATTTCTTTATATCTCCCTTCCCGAGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp AGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCGTGGCACGTGTTGAGTaGAACAGCCTTTGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: SVVQAKMLRATLSWYNSFVARVE*NSLCEA
Trigger: AGCTTCACAAAGGCTGTTTCACTCAACACGTGCCAC...GAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGTCCACTGGTTTCCTCTaGCTGATGGATGGACCACCT +
Preference number: 4 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTSTGFL*LMDGPP
Trigger: AGGTGGTCCATCCATCAGTCAGAGGAAACCAGTGGA...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR TCA 90 bp AGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCGATGTCCATGGTTCCTaGTGCCATGACACATCAGCA +
Preference number: 4 (lower is better)
Translates to: SVVQAKMLRATLSWYNSFDVHGS*CHDTSA
Trigger: TGCTGATGTGTCATGGCATCAGGAACCATGGACATC...GAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp CAGTTATTTGAATATTCCAGAGAATATCCCCTCTTTAGGGCATACTTCCCCCTTTATAACTCCCCTGAGTaGGCCACTTTGCTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: QLFEYSREYPLFRAYFPLYNSPE*ATLLCW
Trigger: CCAGCACAGCAAAGTGGCTCACTCAGGGGAGTTATA...AAGGGGGAAGTATGCCCTAAAGAGGGGATATTCTCTGGAATATTCAAATAACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR GCA 90 bp TCTCGGGAAGGGAGATATAAAGAAATGAGCACCAGTTATTTGAATATTCCAGAGCTCACCAGGGCTTCTTaGCTGGGGTGGAAGTCAACT +
Preference number: 4 (lower is better)
Translates to: SREGRYKEMSTSYLNIPELTRAS*LGWKST
Trigger: AGTTGACTTCCACCCCAGGCAAGAAGCCCTGGTGAG...CTCTGGAATATTCAAATAACTGGTGCTCATTTCTTTATATCTCCCTTCCCGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR GCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGGACCTCCAGAACAACTaGTGGAGCATGATCCCCATG +
Preference number: 4 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTDLQNN*WSMIPM
Trigger: CATGGGGATCATGCTCCAGCAGTTGTTCTGGAGGTC...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR GCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGTGGAGGCTTGGAGGCTaGATCGCAGTAACTAGCACT +
Preference number: 4 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTWRLGG*IAVTST
Trigger: AGTGCTAGTTACTGCGATGCAGCCTCCAAGCCTCCA...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR GCA 90 bp TATAAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATGGCCCTGGACCACATTaGTGTAACTCTGGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: YKISVVQAKMLRATLSWYGPGPH*CNSGGL
Trigger: CAAGCCTCCAGAGTTACAGCAATGTGGTCCAGGGCC...ATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGACCCATGTCCACATGTaGTTGTGCAAGGACCCCATG +
Preference number: 4 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTTHVHM*LCKDPM
Trigger: CATGGGGTCCTTGCACAACCACATGTGGACATGGGT...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR CCA 90 bp AGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCACAAGATACGGAGCATaGGGTCCAAGAACCATGTCG +
Preference number: 4 (lower is better)
Translates to: SVVQAKMLRATLSWYNSFTRYGA*GPRTMS
Trigger: CGACATGGTTCTTGGACCCCATGCTCCGTATCTTGT...GAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGGGTCCGGTTCTCCACTaGTTTCCTCTGACTGATGGA +
Preference number: 4 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTGPVLH*FPLTDG
Trigger: TCCATCAGTCAGAGGAAACCAGTGGAGAACCGGACC...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR CCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGCTCCAGAACAACTGCTaGAGCATGATCCCCATGGTC +
Preference number: 4 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTLQNNC*SMIPMV
Trigger: GACCATGGGGATCATGCTCCAGCAGTTGTTCTGGAG...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR CCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGGTAACTCTGGAGGCTTaGAGGCTGCATCGCAGTAAC +
Preference number: 4 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTVTLEA*RLHRSN
Trigger: GTTACTGCGATGCAGCCTCCAAGCCTCCAGAGTTAC...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR CCA 90 bp TATAAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATTCCGTAGTTCCACTGTaGACAAGGCCCTGGACCACA +
Preference number: 4 (lower is better)
Translates to: YKISVVQAKMLRATLSWYSVVPL*TRPWTT
Trigger: TGTGGTCCAGGGCCTTGTCCACAGTGGAACTACGGA...ATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp AAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATCTTCTCCAAACTCATTaGCCCGCTCGGGGATCACTA +
Preference number: 4 (lower is better)
Translates to: KISVVQAKMLRATLSWYNLLQTH*PARGSL
Trigger: TAGTGATCCCCGAGCGGGTCAATGAGTTTGGAGAAG...ATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp GCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCAATCCTGGTATTCTTGTAATCCTCCTGTaGGTTGACCTGGCCGCGGTA +
Preference number: 4 (lower is better)
Translates to: AKMLRATLSWYNSFNPGILVILL*VDLAAV
Trigger: TACCGCGGCCAGGTCAACTCACAGGAGGATTACAAG...AATACCAGGATTGAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp CAGTTATTTGAATATTCCAGAGAATATCCCCTCTTTAGGGCATACTTCCCCCTTCTCCAAGGACTCATGTaGAAACTTAAAGCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: QLFEYSREYPLFRAYFPLLQGLM*KLKAGA
Trigger: GGCCCCTGCTTTAAGTTTTCACATGAGTCCTTGGAG...AAGGGGGAAGTATGCCCTAAAGAGGGGATATTCTCTGGAATATTCAAATAACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp AGGTATAAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGCTGGAGTTTAACACGTaGTCACAACCAGCTGCCATA +
Preference number: 4 (lower is better)
Translates to: RYKISVVQAKMLRATLSWLEFNT*SQPAAI
Trigger: TATGGCAGCTGGTTGTGATCACGTGTTAAACTCCAG...CCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTTATACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGCATAGGGGTCCCATGTaGACATGTCACTCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTHRGPM*TCHSSL
Trigger: AAGAGAGGAGTGACATGTTCACATGGGACCCCTATG...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR TCA 90 bp GCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCAATCCTGGTATTACAACTGCTGGAGCATaGTCCCCATGGTCCGGTTCT +
Preference number: 4 (lower is better)
Translates to: AKMLRATLSWYNSFNPGITTAGA*SPWSGS
Trigger: AGAACCGGACCATGGGGATCATGCTCCAGCAGTTGT...AATACCAGGATTGAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGGATGTCCATGGTTCCTaGTGCCATGACACATCAGCA +
Preference number: 4 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTDVHGS*CHDTSA
Trigger: TGCTGATGTGTCATGGCATCAGGAACCATGGACATC...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR TCA 90 bp AGGTATAAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGAGACCAGTAGTCATGTaGGGAAGACACTTTCCACAG +
Preference number: 4 (lower is better)
Translates to: RYKISVVQAKMLRATLSWRPVVM*GRHFPQ
Trigger: CTGTGGAAAGTGTCTTCCTCACATGACTACTGGTCT...CCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTTATACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR GCA 90 bp AGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCCACCATACCTGCCGCTaGTTTGTTCCTTTACCACAT +
Preference number: 4 (lower is better)
Translates to: SVVQAKMLRATLSWYNSFHHTCR*FVPLPH
Trigger: ATGTGGTAAAGGAACAAAGCAGCGGCAGGTATGGTG...GAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR GCA 90 bp TATAGGTATAAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTGACCTCCAGAACAACTaGTGGAGCATGATCCCCATG +
Preference number: 4 (lower is better)
Translates to: YRYKISVVQAKMLRATLSDLQNN*WSMIPM
Trigger: CATGGGGATCATGCTCCAGCAGTTGTTCTGGAGGTC...AGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTTATACCTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR GCA 90 bp TATAAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATTGGAGGCTTGGAGGCTaGATCGCAGTAACTAGCACT +
Preference number: 4 (lower is better)
Translates to: YKISVVQAKMLRATLSWYWRLGG*IAVTST
Trigger: AGTGCTAGTTACTGCGATGCAGCCTCCAAGCCTCCA...ATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CCA 90 bp AAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATGCTTCTTGCCTGGGGTaGAAGTCAACTTCCCAAGAC +
Preference number: 4 (lower is better)
Translates to: KISVVQAKMLRATLSWYNASCLG*KSTSQD
Trigger: GTCTTGGGAAGTTGACTTCCACCCCAGGCAAGAAGC...ATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CCA 90 bp AAATCTCGGGAAGGGAGATATAAAGAAATGAGCACCAGTTATTTGAATATTCCACCAGGGCTTCTTGCCTaGGGTGGAAGTCAACTTCCC +
Preference number: 4 (lower is better)
Translates to: KSREGRYKEMSTSYLNIPPGLLA*GGSQLP
Trigger: GGGAAGTTGACTTCCACCCCAGGCAAGAAGCCCTGG...TGGAATATTCAAATAACTGGTGCTCATTTCTTTATATCTCCCTTCCCGAGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGCTCCTCCACAACTCCTaGAACACTGAGACCATTCTG +
Preference number: 4 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTLLHNS*NTETIL
Trigger: CAGAATGGTCTCAGTGTTCCAGGAGTTGTGGAGGAG...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR CCA 90 bp AAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATACCCATGTCCACATGTaGTTGTGCAAGGACCCCATG +
Preference number: 4 (lower is better)
Translates to: KISVVQAKMLRATLSWYNTHVHM*LCKDPM
Trigger: CATGGGGTCCTTGCACAACCACATGTGGACATGGGT...ATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGGGGCGACTAGCTTCATaGCATTCTGTGTCCTCTAAC +
Preference number: 4 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTGRLAS*HSVSSN
Trigger: GTTAGAGGACACAGAATGCCATGAAGCTAGTCGCCC...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR CCA 90 bp AGGTATAAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGGCAGGTCGGGGTAAGTaGGCACAATATGATTCATCT +
Preference number: 4 (lower is better)
Translates to: RYKISVVQAKMLRATLSWAGRGK*AQYDSS
Trigger: AGATGAATCATATTGTGCCCACTTACCCCGACCTGC...CCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTTATACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CCA 90 bp AGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCCGAGTTGTTTTTCCATaGCCACAGGAAGCTGAACAG +
Preference number: 4 (lower is better)
Translates to: SVVQAKMLRATLSWYNSFRVVFP*PQEAEQ
Trigger: CTGTTCAGCTTCCTGTGGCCATGGAAAAACAACTCG...GAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGTGTCCATTTTCATCCTaGCAGACCACAGCCCTATGC +
Preference number: 4 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTCPFSS*QTTALC
Trigger: GCATAGGGCTGTGGTCTGCCAGGATGAAAATGGACA...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR TCA 90 bp TCTCGGGAAGGGAGATATAAAGAAATGAGCACCAGTTATTTGAATATTCCAGAGCATAGGGGTCCCATGTaGACATGTCACTCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: SREGRYKEMSTSYLNIPEHRGPM*TCHSSL
Trigger: AAGAGAGGAGTGACATGTTCACATGGGACCCCTATG...CTCTGGAATATTCAAATAACTGGTGCTCATTTCTTTATATCTCCCTTCCCGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp GCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCAATCCTGGTATTTCCACTGGTTTCCTCTaGCTGATGGATGGACCACCT +
Preference number: 4 (lower is better)
Translates to: AKMLRATLSWYNSFNPGISTGFL*LMDGPP
Trigger: AGGTGGTCCATCCATCAGTCAGAGGAAACCAGTGGA...AATACCAGGATTGAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp AGGTATAAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTCCTCCACATGTTTGTaGACATTCTCCCCAATTTCC +
Preference number: 4 (lower is better)
Translates to: RYKISVVQAKMLRATLSWSSTCL*TFSPIS
Trigger: GGAAATTGGGGAGAATGTTCACAAACATGTGGAGGA...CCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTTATACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGGGGCAAGCATGCATATaGCACTGTATTACGCTAGGT +
Preference number: 4 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTGQACI*HCITLG
Trigger: ACCTAGCGTAATACAGTGTCATATGCATGCTTGCCC...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR TCA 90 bp AGGTATAAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGATTTCTTCAACCACCTaGCCAACACCTTTCAGTCTG +
Preference number: 4 (lower is better)
Translates to: RYKISVVQAKMLRATLSWISSTT*PTPFSL
Trigger: CAGACTGAAAGGTGTTGGTCAGGTGGTTGAAGAAAT...CCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTTATACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp GCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCAATCCTGGTATTGTCCCTGTGGGCATCTaGAAGCACTGTAGCAATCTC +
Preference number: 4 (lower is better)
Translates to: AKMLRATLSWYNSFNPGIVPVGI*KHCSNL
Trigger: GAGATTGCTACAGTGCTTTCAGATGCCCACAGGGAC...AATACCAGGATTGAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp CAGTTATTTGAATATTCCAGAGAATATCCCCTCTTTAGGGCATACTTCCCCCTTCTGATCTTCGTATGCTaGCAGAGGTATAACTCCCCT +
Preference number: 4 (lower is better)
Translates to: QLFEYSREYPLFRAYFPLLIFVC*QRYNSP
Trigger: AGGGGAGTTATACCTCTGTCAGCATACGAAGATCAG...AAGGGGGAAGTATGCCCTAAAGAGGGGATATTCTCTGGAATATTCAAATAACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGTTAGTTCCCACAAGATaGTGGTCCTTTGAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTLVPTR*WSFEAA
Trigger: TGCTGCCTCAAAGGACCATCATCTTGTGGGAACTAA...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR GCA 90 bp GCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCAATCCTGGTATTATTACAGCGCCTGGTTaGACTTTCGATTCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: AKMLRATLSWYNSFNPGIITAPG*TFDSAS
Trigger: GGAGGCGGAATCGAAAGTGCAACCAGGCGCTGTAAT...AATACCAGGATTGAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR GCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGCACCATACCTGCCGCTaGTTTGTTCCTTTACCACAT +
Preference number: 4 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTHHTCR*FVPLPH
Trigger: ATGTGGTAAAGGAACAAAGCAGCGGCAGGTATGGTG...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR CCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGGACCTTGACACATTTTaGTACAGCCTTCCCATGGTC +
Preference number: 4 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTDLDTF*YSLPMV
Trigger: GACCATGGGAAGGCTGTACCAAAATGTGTCAAGGTC...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR CCA 90 bp CAGTTATTTGAATATTCCAGAGAATATCCCCTCTTTAGGGCATACTTCCCCCTTCCATGGCATAGTTCTTaGGTAGGAGGTTTAAGCTGG +
Preference number: 4 (lower is better)
Translates to: QLFEYSREYPLFRAYFPLPWHSS*VGGLSW
Trigger: CCAGCTTAAACCTCCTACCCAAGAACTATGCCATGG...AAGGGGGAAGTATGCCCTAAAGAGGGGATATTCTCTGGAATATTCAAATAACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGCCATGGCATAGTTCTTaGGTAGGAGGTTTAAGCTGG +
Preference number: 4 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTPWHSS*VGGLSW
Trigger: CCAGCTTAAACCTCCTACCCAAGAACTATGCCATGG...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR CCA 90 bp AAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATCTCCTCCACAACTCCTaGAACACTGAGACCATTCTG +
Preference number: 4 (lower is better)
Translates to: KISVVQAKMLRATLSWYNLLHNS*NTETIL
Trigger: CAGAATGGTCTCAGTGTTCCAGGAGTTGTGGAGGAG...ATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CCA 90 bp AAATCTCGGGAAGGGAGATATAAAGAAATGAGCACCAGTTATTTGAATATTCCATGTGCAAGGACCCCATaGTCCTACTTGCCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: KSREGRYKEMSTSYLNIPCARTP*SYLPGS
Trigger: GCTTCCTGGCAAGTAGGACCATGGGGTCCTTGCACA...TGGAATATTCAAATAACTGGTGCTCATTTCTTTATATCTCCCTTCCCGAGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CCA 90 bp TCTCGGGAAGGGAGATATAAAGAAATGAGCACCAGTTATTTGAATATTCCAGAGGGGCGACTAGCTTCATaGCATTCTGTGTCCTCTAAC +
Preference number: 4 (lower is better)
Translates to: SREGRYKEMSTSYLNIPEGRLAS*HSVSSN
Trigger: GTTAGAGGACACAGAATGCCATGAAGCTAGTCGCCC...CTCTGGAATATTCAAATAACTGGTGCTCATTTCTTTATATCTCCCTTCCCGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGGCAGGTCGGGGTAAGTaGGCACAATATGATTCATCT +
Preference number: 4 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTAGRGK*AQYDSS
Trigger: AGATGAATCATATTGTGCCCACTTACCCCGACCTGC...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR CCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGCGAGTTGTTTTTCCATaGCCACAGGAAGCTGAACAG +
Preference number: 4 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTRVVFP*PQEAEQ
Trigger: CTGTTCAGCTTCCTGTGGCCATGGAAAAACAACTCG...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR CCA 90 bp GCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCAATCCTGGTATTCTCCAGAACAACTGCTaGAGCATGATCCCCATGGTC +
Preference number: 4 (lower is better)
Translates to: AKMLRATLSWYNSFNPGILQNNC*SMIPMV
Trigger: GACCATGGGGATCATGCTCCAGCAGTTGTTCTGGAG...AATACCAGGATTGAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CCA 90 bp AAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTGTCCATTTTCATCCTaGCAGACCACAGCCCTATGC +
Preference number: 4 (lower is better)
Translates to: KISVVQAKMLRATLSWYNCPFSS*QTTALC
Trigger: GCATAGGGCTGTGGTCTGCCAGGATGAAAATGGACA...ATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CCA 90 bp CAGTTATTTGAATATTCCAGAGAATATCCCCTCTTTAGGGCATACTTCCCCCTTGCTAAACTGTCCCTGTaGGCATCTGAAAGCACTGTA +
Preference number: 4 (lower is better)
Translates to: QLFEYSREYPLFRAYFPLAKLSL*ASESTV
Trigger: TACAGTGCTTTCAGATGCCCACAGGGACAGTTTAGC...AAGGGGGAAGTATGCCCTAAAGAGGGGATATTCTCTGGAATATTCAAATAACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp TATAGGTATAAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTTTCCGACTACAGTTTaGCCAGCTCCAAGGACTCAT +
Preference number: 4 (lower is better)
Translates to: YRYKISVVQAKMLRATLSFPTTV*PAPRTH
Trigger: ATGAGTCCTTGGAGCTGGTCAAACTGTAGTCGGAAA...AGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTTATACCTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp AAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTTTACACATAGCCCATaGCGGCAATGCATTCCAGGA +
Preference number: 4 (lower is better)
Translates to: KISVVQAKMLRATLSWYNFTHSP*RQCIPG
Trigger: TCCTGGAATGCATTGCCGTCATGGGCTATGTGTAAA...ATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGCAGGAAGCACATGTATaGAGTTCACATGGACTCAGA +
Preference number: 4 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTQEAHV*SSHGLR
Trigger: TCTGAGTCCATGTGAACTTCATACATGTGCTTCCTG...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR TCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGTTAACATCTCGCATCTaGTACCCATGTCCACATGTG +
Preference number: 4 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTLTSRI*YPCPHV
Trigger: CACATGTGGACATGGGTATCAGATGCGAGATGTTAA...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR TCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGTCCTCCACATGTTTGTaGACATTCTCCCCAATTTCC +
Preference number: 4 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTSSTCL*TFSPIS
Trigger: GGAAATTGGGGAGAATGTTCACAAACATGTGGAGGA...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR TCA 90 bp TCTCGGGAAGGGAGATATAAAGAAATGAGCACCAGTTATTTGAATATTCCAGAGTTTACCACAAGAAGCTaGGCACGATGTCCATGGTTC +
Preference number: 4 (lower is better)
Translates to: SREGRYKEMSTSYLNIPEFTTRS*ARCPWF
Trigger: GAACCATGGACATCGTGCTCAGCTTCTTGTGGTAAA...CTCTGGAATATTCAAATAACTGGTGCTCATTTCTTTATATCTCCCTTCCCGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp TATAAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATTCCATGAAGGGCATCTaGCAGATCTACAGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: YKISVVQAKMLRATLSWYSMKGI*QIYRLC
Trigger: ACAAAGCCTGTAGATCTGTCAGATGCCCTTCATGGA...ATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR GCA 90 bp CAGTTATTTGAATATTCCAGAGAATATCCCCTCTTTAGGGCATACTTCCCCCTTGCTTTTCTGTGCTTGTaGACCACAGATGCATGCATA +
Preference number: 4 (lower is better)
Translates to: QLFEYSREYPLFRAYFPLAFLCL*TTDACI
Trigger: TATGCATGCATCTGTGGTGCACAAGCACAGAAAAGC...AAGGGGGAAGTATGCCCTAAAGAGGGGATATTCTCTGGAATATTCAAATAACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CCA 90 bp AGGTATAAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGATCAAAATTAATGACTaGTCCTTCCTCCTCACGGTG +
Preference number: 4 (lower is better)
Translates to: RYKISVVQAKMLRATLSWIKIND*SFLLTV
Trigger: CACCGTGAGGAGGAAGGACCAGTCATTAATTTTGAT...CCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTTATACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CCA 90 bp CAGTTATTTGAATATTCCAGAGAATATCCCCTCTTTAGGGCATACTTCCCCCTTGTGTGCCCAAGCTCATaGGCTATAGTAAAAGCAGAA +
Preference number: 4 (lower is better)
Translates to: QLFEYSREYPLFRAYFPLVCPSS*AIVKAE
Trigger: TTCTGCTTTTACTATAGCCCATGAGCTTGGGCACAC...AAGGGGGAAGTATGCCCTAAAGAGGGGATATTCTCTGGAATATTCAAATAACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CCA 90 bp TATAAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATTGTTCCATCTGCTGGTaGCACGTGTTGAGTGAAACA +
Preference number: 4 (lower is better)
Translates to: YKISVVQAKMLRATLSWYCSICW*HVLSET
Trigger: TGTTTCACTCAACACGTGCCACCAGCAGATGGAACA...ATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CCA 90 bp GCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCAATCCTGGTATTGTCTGTTCCATCTGCTaGTGGCACGTGTTGAGTGAA +
Preference number: 4 (lower is better)
Translates to: AKMLRATLSWYNSFNPGIVCSIC*WHVLSE
Trigger: TTCACTCAACACGTGCCACCAGCAGATGGAACAGAC...AATACCAGGATTGAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CCA 90 bp CAGTTATTTGAATATTCCAGAGAATATCCCCTCTTTAGGGCATACTTCCCCCTTACTGTAAGGTTCCCATaGTCCCCATTCACCATTTAC +
Preference number: 4 (lower is better)
Translates to: QLFEYSREYPLFRAYFPLTVRFP*SPFTIY
Trigger: GTAAATGGTGAATGGGGACCATGGGAACCTTACAGT...AAGGGGGAAGTATGCCCTAAAGAGGGGATATTCTCTGGAATATTCAAATAACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CCA 90 bp AAATCTCGGGAAGGGAGATATAAAGAAATGAGCACCAGTTATTTGAATATTCCAGACGATTACAGCGCCTaGTTGCACTTTCGATTCCGC +
Preference number: 4 (lower is better)
Translates to: KSREGRYKEMSTSYLNIPDDYSA*LHFRFR
Trigger: GCGGAATCGAAAGTGCAACCAGGCGCTGTAATCGTC...TGGAATATTCAAATAACTGGTGCTCATTTCTTTATATCTCCCTTCCCGAGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CCA 90 bp AGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCAATGCCACTGTATCTTaGAAGCCACCTCACATTAGA +
Preference number: 4 (lower is better)
Translates to: SVVQAKMLRATLSWYNSFNATVS*KPPHIR
Trigger: TCTAATGTGAGGTGGCTTCCAAGATACAGTGGCATT...GAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CCA 90 bp AGGTATAAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTGTCTATCTTGGCACTaGAGTTTAACACGTGATCAC +
Preference number: 4 (lower is better)
Translates to: RYKISVVQAKMLRATLSWCLSWH*SLTRDH
Trigger: GTGATCACGTGTTAAACTCCAGTGCCAAGATAGACA...CCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTTATACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CCA 90 bp TCTCGGGAAGGGAGATATAAAGAAATGAGCACCAGTTATTTGAATATTCCAGAGGACCTTGACACATTTTaGTACAGCCTTCCCATGGTC +
Preference number: 4 (lower is better)
Translates to: SREGRYKEMSTSYLNIPEDLDTF*YSLPMV
Trigger: GACCATGGGAAGGCTGTACCAAAATGTGTCAAGGTC...CTCTGGAATATTCAAATAACTGGTGCTCATTTCTTTATATCTCCCTTCCCGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CCA 90 bp TATAAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATGCCACTTTGCTGTGCTaGATATCTTCATCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: YKISVVQAKMLRATLSWYATLLC*ISSSQF
Trigger: GAACTGGGATGAAGATATCCAGCACAGCAAAGTGGC...ATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp TATAGGTATAAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTGGATTATCATCATGTTaGACACCAAGTGTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: YRYKISVVQAKMLRATLSGLSSC*TPSVCP
Trigger: TGGGCACACACTTGGTGTTCAACATGATGATAATCC...AGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTTATACCTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGACTTTGAGTAACAAATaGTGGAAGTGGCAAGTGGTC +
Preference number: 4 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTTLSNK*WKWQVV
Trigger: GACCACTTGCCACTTCCATCATTTGTTACTCAAAGT...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR TCA 90 bp AGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCAAGGTTCTATATCCTTaGCCACATTGGGATGAACAT +
Preference number: 4 (lower is better)
Translates to: SVVQAKMLRATLSWYNSFKVLYP*PHWDEH
Trigger: ATGTTCATCCCAATGTGGTCAAGGATATAGAACCTT...GAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGAATAATGCCATCTTGTaGAGACACAGTTACCATGGC +
Preference number: 4 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTNNAIL*RHSYHG
Trigger: GCCATGGTAACTGTGTCTTCACAAGATGGCATTATT...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR TCA 90 bp AGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCACACTGAGACCATTCTaGATAATGCCATCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: SVVQAKMLRATLSWYNSFTLRPF*IMPSCE
Trigger: TTCACAAGATGGCATTATTCAGAATGGTCTCAGTGT...GAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp AAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATCAGGAAGCACATGTATaGAGTTCACATGGACTCAGA +
Preference number: 4 (lower is better)
Translates to: KISVVQAKMLRATLSWYNQEAHV*SSHGLR
Trigger: TCTGAGTCCATGTGAACTTCATACATGTGCTTCCTG...ATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp GCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCAATCCTGGTATTGGGCAAGCATGCATATaGCACTGTATTACGCTAGGT +
Preference number: 4 (lower is better)
Translates to: AKMLRATLSWYNSFNPGIGQACI*HCITLG
Trigger: ACCTAGCGTAATACAGTGTCATATGCATGCTTGCCC...AATACCAGGATTGAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp TCTCGGGAAGGGAGATATAAAGAAATGAGCACCAGTTATTTGAATATTCCAGAGGATCTACAGGCTTTGTaGGTTGGAGGTTTCTGTACT +
Preference number: 4 (lower is better)
Translates to: SREGRYKEMSTSYLNIPEDLQAL*VGGFCT
Trigger: AGTACAGAAACCTCCAACTCACAAAGCCTGTAGATC...CTCTGGAATATTCAAATAACTGGTGCTCATTTCTTTATATCTCCCTTCCCGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp AAATCTCGGGAAGGGAGATATAAAGAAATGAGCACCAGTTATTTGAATATTCCACAAGGTCGGGTGGACTaGTCACACATTTCTTCAACC +
Preference number: 4 (lower is better)
Translates to: KSREGRYKEMSTSYLNIPQGRVD*SHISST
Trigger: GGTTGAAGAAATGTGTGATCAGTCCACCCGACCTTG...TGGAATATTCAAATAACTGGTGCTCATTTCTTTATATCTCCCTTCCCGAGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp TCTCGGGAAGGGAGATATAAAGAAATGAGCACCAGTTATTTGAATATTCCAGAGAATTCCACAAGTCACTaGGCACTTGCTCCATTTTCC +
Preference number: 4 (lower is better)
Translates to: SREGRYKEMSTSYLNIPENSTSH*ALAPFS
Trigger: GGAAAATGGAGCAAGTGCTCAGTGACTTGTGGAATT...CTCTGGAATATTCAAATAACTGGTGCTCATTTCTTTATATCTCCCTTCCCGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR GCA 90 bp AGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCTGCACCACAGATGCATaGATATATTTATATGGGGAC +
Preference number: 4 (lower is better)
Translates to: SVVQAKMLRATLSWYNSFCTTDA*IYLYGD
Trigger: GTCCCCATATAAATATATGCATGCATCTGTGGTGCA...GAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR GCA 90 bp CAGTTATTTGAATATTCCAGAGAATATCCCCTCTTTAGGGCATACTTCCCCCTTATCGAAATTTCATCCTaGGGCCCACACAGTAATTTC +
Preference number: 4 (lower is better)
Translates to: QLFEYSREYPLFRAYFPLIEISS*GPHSNF
Trigger: GAAATTACTGTGTGGGCCGCAGGATGAAATTTCGAT...AAGGGGGAAGTATGCCCTAAAGAGGGGATATTCTCTGGAATATTCAAATAACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR GCA 90 bp CAGTTATTTGAATATTCCAGAGAATATCCCCTCTTTAGGGCATACTTCCCCCTTCTCGAAAGTCTTGTGTaGCTTTTGGACATGAATCAG +
Preference number: 4 (lower is better)
Translates to: QLFEYSREYPLFRAYFPLLESLV*LLDMNQ
Trigger: CTGATTCATGTCCAAAAGGCACACAAGACTTTCGAG...AAGGGGGAAGTATGCCCTAAAGAGGGGATATTCTCTGGAATATTCAAATAACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR GCA 90 bp AGGTATAAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGGCTGATGGTAGTTCATaGATAAAACTTGTCGAGTTG +
Preference number: 4 (lower is better)
Translates to: RYKISVVQAKMLRATLSWADGSS*IKLVEL
Trigger: CAACTCGACAAGTTTTATGCATGAACTACCATCAGC...CCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTTATACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR GCA 90 bp TCTCGGGAAGGGAGATATAAAGAAATGAGCACCAGTTATTTGAATATTCCAGAGCAACACCTTTCAGTCTaGAGTATACATCCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: SREGRYKEMSTSYLNIPEQHLSV*SIHPSA
Trigger: AGCAGAGGGATGTATACTGCAGACTGAAAGGTGTTG...CTCTGGAATATTCAAATAACTGGTGCTCATTTCTTTATATCTCCCTTCCCGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR GCA 90 bp AGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCTTCCAAGTGGCCAAATaGAAACAGCTGTTAATGCAT +
Preference number: 4 (lower is better)
Translates to: SVVQAKMLRATLSWYNSFFQVAK*KQLLMH
Trigger: ATGCATTAACAGCTGTTTGCATTTGGCCACTTGGAA...GAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR GCA 90 bp TATAGGTATAAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTCTGAGTGAGCCACTTTaGTGTGCTGGATATCTTCAT +
Preference number: 4 (lower is better)
Translates to: YRYKISVVQAKMLRATLSLSEPL*CAGYLH
Trigger: ATGAAGATATCCAGCACAGCAAAGTGGCTCACTCAG...AGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTTATACCTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGGATGGAAGTGGCAAGTaGTCACATTCTTTATCAGAC +
Preference number: 4 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTDGSGK*SHSLSD
Trigger: GTCTGATAAAGAATGTGACCACTTGCCACTTCCATC...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR CCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGAAGACACAGTTACCATaGCATAGTTCTTGGGTAGGA +
Preference number: 4 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTKTQLP*HSSWVG
Trigger: TCCTACCCAAGAACTATGCCATGGTAACTGTGTCTT...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR CCA 90 bp AGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCTCATATGACTTGAATTaGGAGACCAGTAGTCATGTG +
Preference number: 4 (lower is better)
Translates to: SVVQAKMLRATLSWYNSFSYDLN*ETSSHV
Trigger: CACATGACTACTGGTCTCCCAATTCAAGTCATATGA...GAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CCA 90 bp TCTCGGGAAGGGAGATATAAAGAAATGAGCACCAGTTATTTGAATATTCCAGAGGAGACATATTGGACATaGAAATCTCGGGAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: SREGRYKEMSTSYLNIPEETYWT*KSREGR
Trigger: TCTCCCTTCCCGAGATTTCCATGTCCAATATGTCTC...CTCTGGAATATTCAAATAACTGGTGCTCATTTCTTTATATCTCCCTTCCCGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp CAGTTATTTGAATATTCCAGAGAATATCCCCTCTTTAGGGCATACTTCCCCCTTAGATGTGGCTTGTTGTaGCCATCTTCATATTCATTC +
Preference number: 4 (lower is better)
Translates to: QLFEYSREYPLFRAYFPLRCGLL*PSSYSF
Trigger: GAATGAATATGAAGATGGTCACAACAAGCCACATCT...AAGGGGGAAGTATGCCCTAAAGAGGGGATATTCTCTGGAATATTCAAATAACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp AGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCCATAATGAGAACTGTTaGAGACACCTGTTATTGTCT +
Preference number: 4 (lower is better)
Translates to: SVVQAKMLRATLSWYNSFHNENC*RHLLLS
Trigger: AGACAATAACAGGTGTCTTCAACAGTTCTCATTATG...GAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp AGGTATAAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTCAGACACAACACTATaGTCACTCTTATGTATGCAA +
Preference number: 4 (lower is better)
Translates to: RYKISVVQAKMLRATLSWSDTTL*SLLCMQ
Trigger: TTGCATACATAAGAGTGATCATAGTGTTGTGTCTGA...CCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTTATACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp AAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATACTTTGAGTAACAAATaGTGGAAGTGGCAAGTGGTC +
Preference number: 4 (lower is better)
Translates to: KISVVQAKMLRATLSWYNTLSNK*WKWQVV
Trigger: GACCACTTGCCACTTCCATCATTTGTTACTCAAAGT...ATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp CAGTTATTTGAATATTCCAGAGAATATCCCCTCTTTAGGGCATACTTCCCCCTTTTGACCACATTGGGATaGACATTCACTTTTGCCAAT +
Preference number: 4 (lower is better)
Translates to: QLFEYSREYPLFRAYFPLLTTLG*TFTFAN
Trigger: ATTGGCAAAAGTGAATGTTCATCCCAATGTGGTCAA...AAGGGGGAAGTATGCCCTAAAGAGGGGATATTCTCTGGAATATTCAAATAACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGTTGACCACATTGGGATaGACATTCACTTTTGCCAAT +
Preference number: 4 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTLTTLG*TFTFAN
Trigger: ATTGGCAAAAGTGAATGTTCATCCCAATGTGGTCAA...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR TCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGAAGGTTCTATATCCTTaGCCACATTGGGATGAACAT +
Preference number: 4 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTKVLYP*PHWDEH
Trigger: ATGTTCATCCCAATGTGGTCAAGGATATAGAACCTT...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR TCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGACAGTCTGTCCTTCATaGATGGAATACTTCATGCAA +
Preference number: 4 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTTVCPS*MEYFMQ
Trigger: TTGCATGAAGTATTCCATTCATGAAGGACAGACTGT...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR TCA 90 bp TATAAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATAATGCCATCTTGTaGAGACACAGTTACCATGGC +
Preference number: 4 (lower is better)
Translates to: YKISVVQAKMLRATLSWYNNAIL*RHSYHG
Trigger: GCCATGGTAACTGTGTCTTCACAAGATGGCATTATT...ATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGACACTGAGACCATTCTaGATAATGCCATCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTTLRPF*IMPSCE
Trigger: TTCACAAGATGGCATTATTCAGAATGGTCTCAGTGT...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR TCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGTTCAGGTTTGGTACTTaGATTACAGAAGCCATCACT +
Preference number: 4 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTFRFGT*ITEAIT
Trigger: AGTGATGGCTTCTGTAATTCAAGTACCAAACCTGAA...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR TCA 90 bp GCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCAATCCTGGTATTTTAACATCTCGCATCTaGTACCCATGTCCACATGTG +
Preference number: 4 (lower is better)
Translates to: AKMLRATLSWYNSFNPGILTSRI*YPCPHV
Trigger: CACATGTGGACATGGGTATCAGATGCGAGATGTTAA...AATACCAGGATTGAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp AAATCTCGGGAAGGGAGATATAAAGAAATGAGCACCAGTTATTTGAATATTCCAGCTATTGGCTTTCCATaGAGGGCATCTGACAGATCT +
Preference number: 4 (lower is better)
Translates to: KSREGRYKEMSTSYLNIPAIGFP*RASDRS
Trigger: AGATCTGTCAGATGCCCTTCATGGAAAGCCAATAGC...TGGAATATTCAAATAACTGGTGCTCATTTCTTTATATCTCCCTTCCCGAGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp TCTCGGGAAGGGAGATATAAAGAAATGAGCACCAGTTATTTGAATATTCCAGAGGTGCACTCCATTCGTTaGTGTGAATCTTTTCTCTCA +
Preference number: 4 (lower is better)
Translates to: SREGRYKEMSTSYLNIPEVHSIR*CESFLS
Trigger: TGAGAGAAAAGATTCACATCAACGAATGGAGTGCAC...CTCTGGAATATTCAAATAACTGGTGCTCATTTCTTTATATCTCCCTTCCCGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp AGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCTTTCATTCACTTGTCTaGTTTGGTTATCTGTGCACT +
Preference number: 4 (lower is better)
Translates to: SVVQAKMLRATLSWYNSFFHSLV*FGYLCT
Trigger: AGTGCACAGATAACCAAATCAGACAAGTGAATGAAA...GAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp CAGTTATTTGAATATTCCAGAGAATATCCCCTCTTTAGGGCATACTTCCCCCTTCTTCATCCCAGTTCCTaGCAAATTAATGCTAAACTG +
Preference number: 4 (lower is better)
Translates to: QLFEYSREYPLFRAYFPLLHPSS*QINAKL
Trigger: CAGTTTAGCATTAATTTGTCAGGAACTGGGATGAAG...AAGGGGGAAGTATGCCCTAAAGAGGGGATATTCTCTGGAATATTCAAATAACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGAAGATGATGGTCCTTTaGGGCAGCAATTTCACTTTA +
Preference number: 4 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTKMMVL*GSNFTL
Trigger: TAAAGTGAAATTGCTGCCTCAAAGGACCATCATCTT...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR GCA 90 bp AGGTATAAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGCTTGTGCACCACAGATaGATGCATATATTTATATGG +
Preference number: 4 (lower is better)
Translates to: RYKISVVQAKMLRATLSWLVHHR*MHIFIW
Trigger: CCATATAAATATATGCATGCATCTGTGGTGCACAAG...CCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTTATACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR GCA 90 bp GCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCAATCCTGGTATTCACCTGTTATTGTCTTaGATGAAGAGTTGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: AKMLRATLSWYNSFNPGIHLLLS*MKSCPH
Trigger: GTGGGGACAACTCTTCATGCAAGACAATAACAGGTG...AATACCAGGATTGAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR GCA 90 bp TATAGGTATAAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTAACGTTTGTTGCTCCTaGGGGAATCTTTACAACAAC +
Preference number: 4 (lower is better)
Translates to: YRYKISVVQAKMLRATLSNVCCS*GNLYNN
Trigger: GTTGTTGTAAAGATTCCCGCAGGAGCAACAAACGTT...AGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTTATACCTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR GCA 90 bp AAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATAATGTCAACGTTTGTTaGTCCTGCGGGAATCTTTAC +
Preference number: 4 (lower is better)
Translates to: KISVVQAKMLRATLSWYNNVNVC*SCGNLY
Trigger: GTAAAGATTCCCGCAGGAGCAACAAACGTTGACATT...ATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR GCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGCTTTTGCCAATAACATaGCACCTTAGTTCACAGTCT +
Preference number: 4 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTLLPIT*HLSSQS
Trigger: AGACTGTGAACTAAGGTGGCATGTTATTGGCAAAAG...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR GCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGGAATGGAATACTTCATaGAATGGATGTCCAAGGTTC +
Preference number: 4 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTEWNTS*NGCPRF
Trigger: GAACCTTGGACATCCATTGCATGAAGTATTCCATTC...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR GCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGGACAGGAAAATTCATTaGAATTCTCTCTCGTCACTC +
Preference number: 4 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTDRKIH*NSLSSL
Trigger: GAGTGACGAGAGAGAATTGCAATGAATTTTCCTGTC...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR GCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGGCTGATGGTAGTTCATaGATAAAACTTGTCGAGTTG +
Preference number: 4 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTADGSS*IKLVEL
Trigger: CAACTCGACAAGTTTTATGCATGAACTACCATCAGC...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR GCA 90 bp AGGTATAAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTTTGGAATTGGTCAATaGAAAACACTTCACGGTACT +
Preference number: 4 (lower is better)
Translates to: RYKISVVQAKMLRATLSWFGIGQ*KTLHGT
Trigger: AGTACCGTGAAGTGTTTTGCATTGACCAATTCCAAA...CCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTTATACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CCA 90 bp AAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATGATGGAAGTGGCAAGTaGTCACATTCTTTATCAGAC +
Preference number: 4 (lower is better)
Translates to: KISVVQAKMLRATLSWYNDGSGK*SHSLSD
Trigger: GTCTGATAAAGAATGTGACCACTTGCCACTTCCATC...ATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CCA 90 bp TCTCGGGAAGGGAGATATAAAGAAATGAGCACCAGTTATTTGAATATTCCAGAGAAGACACAGTTACCATaGCATAGTTCTTGGGTAGGA +
Preference number: 4 (lower is better)
Translates to: SREGRYKEMSTSYLNIPEKTQLP*HSSWVG
Trigger: TCCTACCCAAGAACTATGCCATGGTAACTGTGTCTT...CTCTGGAATATTCAAATAACTGGTGCTCATTTCTTTATATCTCCCTTCCCGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CCA 90 bp AGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCTCAGAGATTCAGGTTTaGTACTTGAATTACAGAAGC +
Preference number: 4 (lower is better)
Translates to: SVVQAKMLRATLSWYNSFSEIQV*YLNYRS
Trigger: GCTTCTGTAATTCAAGTACCAAACCTGAATCTCTGA...GAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CCA 90 bp AGGTATAAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGGTAATTCTCATCAATTaGCTGATGGTAGTTCATGCA +
Preference number: 4 (lower is better)
Translates to: RYKISVVQAKMLRATLSWVILIN*LMVVHA
Trigger: TGCATGAACTACCATCAGCCAATTGATGAGAATTAC...CCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTTATACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CCA 90 bp TATAAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATACAGGCTTTGTGAGTTaGAGGTTTCTGTACTTGACT +
Preference number: 4 (lower is better)
Translates to: YKISVVQAKMLRATLSWYTGFVS*RFLYLT
Trigger: AGTCAAGTACAGAAACCTCCAACTCACAAAGCCTGT...ATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CCA 90 bp GCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCAATCCTGGTATTGAGAACAAGGTCGGGTaGACTGATCACACATTTCTT +
Preference number: 4 (lower is better)
Translates to: AKMLRATLSWYNSFNPGIENKVG*TDHTFL
Trigger: AAGAAATGTGTGATCAGTCCACCCGACCTTGTTCTC...AATACCAGGATTGAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGTGTTTCAATTGTCTCTaGATCACAGTGCCTAGGATA +
Preference number: 4 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTCFNCL*ITVPRI
Trigger: TATCCTAGGCACTGTGATCCAGAGACAATTGAAACA...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR TCA 90 bp CAGTTATTTGAATATTCCAGAGAATATCCCCTCTTTAGGGCATACTTCCCCCTTCTTTATTTGACTTTCTaGCACACTGCAATACTTCAG +
Preference number: 4 (lower is better)
Translates to: QLFEYSREYPLFRAYFPLLYLTF*HTAILQ
Trigger: CTGAAGTATTGCAGTGTGTCAGAAAGTCAAATAAAG...AAGGGGGAAGTATGCCCTAAAGAGGGGATATTCTCTGGAATATTCAAATAACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp AAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATCAAGGTCATTCTaGGTTTGTTGCCATGAACAA +
Preference number: 4 (lower is better)
Translates to: KISVVQAKMLRATLSWYNSSRSF*VCCHEQ
Trigger: TTGTTCATGGCAACAAACTCAGAATGACCTTGATGA...ATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp AAATCTCGGGAAGGGAGATATAAAGAAATGAGCACCAGTTATTTGAATATTCCAGTGAAACAGCCTTTGTaGAGCTTTTCTGTGCTTGTG +
Preference number: 4 (lower is better)
Translates to: KSREGRYKEMSTSYLNIPVKQPL*SFSVLV
Trigger: CACAAGCACAGAAAAGCTTCACAAAGGCTGTTTCAC...TGGAATATTCAAATAACTGGTGCTCATTTCTTTATATCTCCCTTCCCGAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp AAATCTCGGGAAGGGAGATATAAAGAAATGAGCACCAGTTATTTGAATATTCCATGTTATTGTCTTGCATaGAGAGTTGTCCCCACCACA +
Preference number: 4 (lower is better)
Translates to: KSREGRYKEMSTSYLNIPCYCLA*RVVPTT
Trigger: TGTGGTGGGGACAACTCTTCATGCAAGACAATAACA...TGGAATATTCAAATAACTGGTGCTCATTTCTTTATATCTCCCTTCCCGAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGTCAGACACAACACTATaGTCACTCTTATGTATGCAA +
Preference number: 4 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTSDTTL*SLLCMQ
Trigger: TTGCATACATAAGAGTGATCATAGTGTTGTGTCTGA...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR TCA 90 bp AAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATACAGTCTGTCCTTCATaGATGGAATACTTCATGCAA +
Preference number: 4 (lower is better)
Translates to: KISVVQAKMLRATLSWYNTVCPS*MEYFMQ
Trigger: TTGCATGAAGTATTCCATTCATGAAGGACAGACTGT...ATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp AAATCTCGGGAAGGGAGATATAAAGAAATGAGCACCAGTTATTTGAATATTCCATCTAGTTCCATCCTCTaGTCTTCGTATGCTGACAGA +
Preference number: 4 (lower is better)
Translates to: KSREGRYKEMSTSYLNIPSSSIL*SSYADR
Trigger: TCTGTCAGCATACGAAGATCAGAGGATGGAACTAGA...TGGAATATTCAAATAACTGGTGCTCATTTCTTTATATCTCCCTTCCCGAGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp TATAGGTATAAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTAATGTTCATATGACTTaGATTGGGAGACCAGTAGTC +
Preference number: 4 (lower is better)
Translates to: YRYKISVVQAKMLRATLSNVHMT*IGRPVV
Trigger: GACTACTGGTCTCCCAATTCAAGTCATATGAACATT...AGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTTATACCTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp GCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCAATCCTGGTATTGACCTTATTAAGCAGTaGTTTGAATCCCTGATGAGC +
Preference number: 4 (lower is better)
Translates to: AKMLRATLSWYNSFNPGIDLIKQ*FESLMS
Trigger: GCTCATCAGGGATTCAAATCACTGCTTAATAAGGTC...AATACCAGGATTGAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR GCA 90 bp GCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCAATCCTGGTATTAACGCAAGCTCACACTaGTTGTTTCCATCATATCGT +
Preference number: 4 (lower is better)
Translates to: AKMLRATLSWYNSFNPGINASSH*LFPSYR
Trigger: ACGATATGATGGAAACAAGCAGTGTGAGCTTGCGTT...AATACCAGGATTGAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR GCA 90 bp AAATCTCGGGAAGGGAGATATAAAGAAATGAGCACCAGTTATTTGAATATTCCATGTGAAGCTTTTCTGTaGTTGTGCACCACAGATGCA +
Preference number: 4 (lower is better)
Translates to: KSREGRYKEMSTSYLNIPCEAFL*LCTTDA
Trigger: TGCATCTGTGGTGCACAAGCACAGAAAAGCTTCACA...TGGAATATTCAAATAACTGGTGCTCATTTCTTTATATCTCCCTTCCCGAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR GCA 90 bp AAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATCCCACACACAACACCTaGAAAATAAGTTCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: KISVVQAKMLRATLSWYNPTHNT*KISSFS
Trigger: AGAGAAAGAACTTATTTTGCAGGTGTTGTGTGTGGG...ATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR GCA 90 bp AGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCTTAATGGCAAATTCGTaGTTAGATAATAGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: SVVQAKMLRATLSWYNSFLMANS*LDNSLA
Trigger: AGCCAAGCTATTATCTAAGCACGAATTTGCCATTAA...GAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR GCA 90 bp TCTCGGGAAGGGAGATATAAAGAAATGAGCACCAGTTATTTGAATATTCCAGAGTTACCACAATGTAATTaGAAGGAGGGTTCCTGCAAT +
Preference number: 4 (lower is better)
Translates to: SREGRYKEMSTSYLNIPELPQCN*KEGSCN
Trigger: ATTGCAGGAACCCTCCTTGCAATTACATTGTGGTAA...CTCTGGAATATTCAAATAACTGGTGCTCATTTCTTTATATCTCCCTTCCCGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR GCA 90 bp GCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCAATCCTGGTATTAAGTCACTGAGCACTTaGTCCATTTTCCAACTTTCC +
Preference number: 4 (lower is better)
Translates to: AKMLRATLSWYNSFNPGIKSLST*SIFQLS
Trigger: GGAAAGTTGGAAAATGGAGCAAGTGCTCAGTGACTT...AATACCAGGATTGAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CCA 90 bp AGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCATGCATATATTTATATaGGGACACATTTGTGACCCA +
Preference number: 4 (lower is better)
Translates to: SVVQAKMLRATLSWYNSFMHIFI*GHICDP
Trigger: TGGGTCACAAATGTGTCCCCATATAAATATATGCAT...GAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGTCTGTCCTTCATGAATaGAATACTTCATGCAATGGA +
Preference number: 4 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTSVLHE*NTSCNG
Trigger: TCCATTGCATGAAGTATTCCATTCATGAAGGACAGA...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR CCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGTTGTCAGCAAGACGATaGCCAAAGTTATTCATACAA +
Preference number: 4 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTLSARR*PKLFIQ
Trigger: TTGTATGAATAACTTTGGCCATCGTCTTGCTGACAA...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR CCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGTCAGAGATTCAGGTTTaGTACTTGAATTACAGAAGC +
Preference number: 4 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTSEIQV*YLNYRS
Trigger: GCTTCTGTAATTCAAGTACCAAACCTGAATCTCTGA...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR CCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGGTAATTCTCATCAATTaGCTGATGGTAGTTCATGCA +
Preference number: 4 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTVILIN*LMVVHA
Trigger: TGCATGAACTACCATCAGCCAATTGATGAGAATTAC...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR CCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGCTGTATTACGCTAGGTaGCTTGTTTACAATTTCACA +
Preference number: 4 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTLYYAR*LVYNFT
Trigger: TGTGAAATTGTAAACAAGCCACCTAGCGTAATACAG...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR CCA 90 bp CAGTTATTTGAATATTCCAGAGAATATCCCCTCTTTAGGGCATACTTCCCCCTTATGTTTCTTAGTAGATaGGATCTCGGTGCAATATGT +
Preference number: 4 (lower is better)
Translates to: QLFEYSREYPLFRAYFPLMFLSR*DLGAIC
Trigger: ACATATTGCACCGAGATCCCATCTACTAAGAAACAT...AAGGGGGAAGTATGCCCTAAAGAGGGGATATTCTCTGGAATATTCAAATAACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CCA 90 bp AAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATATAGGCCGAAGTCGATaGAGCTTATGTTTCTTAGTA +
Preference number: 4 (lower is better)
Translates to: KISVVQAKMLRATLSWYNIGRSR*SLCFLV
Trigger: TACTAAGAAACATAAGCTCCATCGACTTCGGCCTAT...ATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CCA 90 bp AGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCGCACCTGGTTTTAAATaGTTTAAACATAAGTCACTG +
Preference number: 4 (lower is better)
Translates to: SVVQAKMLRATLSWYNSFAPGFK*FKHKSL
Trigger: CAGTGACTTATGTTTAAACCATTTAAAACCAGGTGC...GAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CCA 90 bp TCTCGGGAAGGGAGATATAAAGAAATGAGCACCAGTTATTTGAATATTCCAGAGTCCAGCTGTGGCAAATaGAACTGCATTTCCAAATAT +
Preference number: 4 (lower is better)
Translates to: SREGRYKEMSTSYLNIPESSCGK*NCISKY
Trigger: ATATTTGGAAATGCAGTTCCATTTGCCACAGCTGGA...CTCTGGAATATTCAAATAACTGGTGCTCATTTCTTTATATCTCCCTTCCCGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp AAATCTCGGGAAGGGAGATATAAAGAAATGAGCACCAGTTATTTGAATATTCCATGCAAATTCGATCCATaGGCAGAAACCACTTTAGCA +
Preference number: 4 (lower is better)
Translates to: KSREGRYKEMSTSYLNIPCKFDP*AETTLA
Trigger: TGCTAAAGTGGTTTCTGCTCATGGATCGAATTTGCA...TGGAATATTCAAATAACTGGTGCTCATTTCTTTATATCTCCCTTCCCGAGATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp AAATCTCGGGAAGGGAGATATAAAGAAATGAGCACCAGTTATTTGAATATTCCACCTTCCTCCTCACGGTaGATCATAACTAATTTTACC +
Preference number: 4 (lower is better)
Translates to: KSREGRYKEMSTSYLNIPPSSSR*IITNFT
Trigger: GGTAAAATTAGTTATGATTCACCGTGAGGAGGAAGG...TGGAATATTCAAATAACTGGTGCTCATTTCTTTATATCTCCCTTCCCGAGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp AAATCTCGGGAAGGGAGATATAAAGAAATGAGCACCAGTTATTTGAATATTCCAGGAGGTTTCTGTACTTaGCTGCAATTTGTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: KSREGRYKEMSTSYLNIPGGFCT*LQFVSS
Trigger: AGAAGACACAAATTGCAGTCAAGTACAGAAACCTCC...TGGAATATTCAAATAACTGGTGCTCATTTCTTTATATCTCCCTTCCCGAGATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp TATAGGTATAAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTTTGCAGGTGGTAAATaGTTTACAGTCATTGGCATA +
Preference number: 4 (lower is better)
Translates to: YRYKISVVQAKMLRATLSFAGGK*FTVIGI
Trigger: TATGCCAATGACTGTAAATCATTTACCACCTGCAAA...AGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTTATACCTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR GCA 90 bp AAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATGATCTTCATTCATGTTaGTGTAGGTATGAAAGGGTA +
Preference number: 4 (lower is better)
Translates to: KISVVQAKMLRATLSWYNDLHSC*CRYERV
Trigger: TACCCTTTCATACCTACAGCAACATGAATGAAGATC...ATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR GCA 90 bp AAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTTAAAATCAGAGCACTaGTTCTCTCGAAAGTCTTGT +
Preference number: 4 (lower is better)
Translates to: KISVVQAKMLRATLSWYNLKSEH*FSRKSC
Trigger: ACAAGACTTTCGAGAGAAGCAGTGCTCTGATTTTAA...ATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR GCA 90 bp GCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCAATCCTGGTATTGAATGGAATACTTCATaGAATGGATGTCCAAGGTTC +
Preference number: 4 (lower is better)
Translates to: AKMLRATLSWYNSFNPGIEWNTS*NGCPRF
Trigger: GAACCTTGGACATCCATTGCATGAAGTATTCCATTC...AATACCAGGATTGAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGC
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR GCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGTTAATGGCAAATTCGTaGTTAGATAATAGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTLMANS*LDNSLA
Trigger: AGCCAAGCTATTATCTAAGCACGAATTTGCCATTAA...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR GCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGATTGCAACTAATCAATaGTACTGCTGTAGTGCAAAA +
Preference number: 4 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTIATNQ*YCCSAK
Trigger: TTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR CCA 90 bp AAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCTGTATATAAGATGTaGCTTGTTGTGACCATCTTC +
Preference number: 4 (lower is better)
Translates to: KISVVQAKMLRATLSWYNSVYKM*LVVTIF
Trigger: GAAGATGGTCACAACAAGCCACATCTTATATACAGA...ATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CCA 90 bp GCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCAATCCTGGTATTCACATTTGTCTATCTTaGCACTGGAGTTTAACACGT +
Preference number: 4 (lower is better)
Translates to: AKMLRATLSWYNSFNPGIHICLS*HWSLTR
Trigger: ACGTGTTAAACTCCAGTGCCAAGATAGACAAATGTG...AATACCAGGATTGAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CCA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGGAATACTTCATGCAATaGATGTCCAAGGTTCTATAT +
Preference number: 4 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTEYFMQ*MSKVLY
Trigger: ATATAGAACCTTGGACATCCATTGCATGAAGTATTC...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR CCA 90 bp AAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATCTGTATTACGCTAGGTaGCTTGTTTACAATTTCACA +
Preference number: 4 (lower is better)
Translates to: KISVVQAKMLRATLSWYNLYYAR*LVYNFT
Trigger: TGTGAAATTGTAAACAAGCCACCTAGCGTAATACAG...ATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CCA 90 bp CAGTTATTTGAATATTCCAGAGAATATCCCCTCTTTAGGGCATACTTCCCCCTTAGAGCAACACTGTCTTaGTATAATTCATTCAATCCT +
Preference number: 4 (lower is better)
Translates to: QLFEYSREYPLFRAYFPLRATLS*YNSFNP
Trigger: AGGATTGAATGAATTATACCAAGACAGTGTTGCTCT...AAGGGGGAAGTATGCCCTAAAGAGGGGATATTCTCTGGAATATTCAAATAACTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp GCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCAATCCTGGTATTCTTCCAAAGGGATATTaGAGGAATAATGTACATCAG +
Preference number: 4 (lower is better)
Translates to: AKMLRATLSWYNSFNPGILPKGY*RNNVHQ
Trigger: CTGATGTACATTATTCCTTCAATATCCCTTTGGAAG...AATACCAGGATTGAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp AAATCTCGGGAAGGGAGATATAAAGAAATGAGCACCAGTTATTTGAATATTCCATTCAGGTTTGGTACTTaGATTACAGAAGCCATCACT +
Preference number: 4 (lower is better)
Translates to: KSREGRYKEMSTSYLNIPFRFGT*ITEAIT
Trigger: AGTGATGGCTTCTGTAATTCAAGTACCAAACCTGAA...TGGAATATTCAAATAACTGGTGCTCATTTCTTTATATCTCCCTTCCCGAGATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp GCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCAATCCTGGTATTCAATTCTTATTTTGCTaGAAACAGTGTATCCAGCAG +
Preference number: 4 (lower is better)
Translates to: AKMLRATLSWYNSFNPGIQFLFC*KQCIQQ
Trigger: CTGCTGGATACACTGTTTTCAGCAAAATAAGAATTG...AATACCAGGATTGAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR GCA 90 bp AAATCTCGGGAAGGGAGATATAAAGAAATGAGCACCAGTTATTTGAATATTCCACTTTTGCCAATAACATaGCACCTTAGTTCACAGTCT +
Preference number: 4 (lower is better)
Translates to: KSREGRYKEMSTSYLNIPLLPIT*HLSSQS
Trigger: AGACTGTGAACTAAGGTGGCATGTTATTGGCAAAAG...TGGAATATTCAAATAACTGGTGCTCATTTCTTTATATCTCCCTTCCCGAGATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR GCA 90 bp AAATCTCGGGAAGGGAGATATAAAGAAATGAGCACCAGTTATTTGAATATTCCAGACAGGAAAATTCATTaGAATTCTCTCTCGTCACTC +
Preference number: 4 (lower is better)
Translates to: KSREGRYKEMSTSYLNIPDRKIH*NSLSSL
Trigger: GAGTGACGAGAGAGAATTGCAATGAATTTTCCTGTC...TGGAATATTCAAATAACTGGTGCTCATTTCTTTATATCTCCCTTCCCGAGATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CCA 90 bp AAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATATAGGTAGAAATAATTaGTTCCAGCAACCTGACAAT +
Preference number: 4 (lower is better)
Translates to: KISVVQAKMLRATLSWYNIGRNN*FQQPDN
Trigger: ATTGTCAGGTTGCTGGAACCAATTATTTCTACCTAT...ATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CCA 90 bp GCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCAATCCTGGTATTTCTGTCCTTCATGAATaGAATACTTCATGCAATGGA +
Preference number: 4 (lower is better)
Translates to: AKMLRATLSWYNSFNPGISVLHE*NTSCNG
Trigger: TCCATTGCATGAAGTATTCCATTCATGAAGGACAGA...AATACCAGGATTGAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CCA 90 bp GCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCAATCCTGGTATTTTGTCAGCAAGACGATaGCCAAAGTTATTCATACAA +
Preference number: 4 (lower is better)
Translates to: AKMLRATLSWYNSFNPGILSARR*PKLFIQ
Trigger: TTGTATGAATAACTTTGGCCATCGTCTTGCTGACAA...AATACCAGGATTGAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR TCA 90 bp AAATCTCGGGAAGGGAGATATAAAGAAATGAGCACCAGTTATTTGAATATTCCAATGTGGTTTTTCACTTaGATTTCTTTGCAGGTGGTA +
Preference number: 4 (lower is better)
Translates to: KSREGRYKEMSTSYLNIPMWFFT*ISLQVV
Trigger: TACCACCTGCAAAGAAATTCAAGTGAAAAACCACAT...TGGAATATTCAAATAACTGGTGCTCATTTCTTTATATCTCCCTTCCCGAGATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CCA 90 bp GCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCAATCCTGGTATTGAATACTTCATGCAATaGATGTCCAAGGTTCTATAT +
Preference number: 4 (lower is better)
Translates to: AKMLRATLSWYNSFNPGIEYFMQ*MSKVLY
Trigger: ATATAGAACCTTGGACATCCATTGCATGAAGTATTC...AATACCAGGATTGAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGC
36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS CCA 90 bp CCGCTCTCCGCGCCTCAGCAGCCTAGGGAACAGCAGCGCGGGCCCTaGGCCGGCTGGTCCAGCCACACCGCCTGTCTCCGCTCGCTGAGC +
Preference number: 5 (lower is better)
Translates to: PLSAPQQPREQQRGP*AGWSSHTACLRSLS
Trigger: GCTCAGCGAGCGGAGACAGGCGGTGTGGCTGGACCAGCCGGCCCAGGGCCCGCGCTGCTGTTCCCTAGGCTGCTGAGGCGCGGAGAGCGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS GCA 90 bp GTTGACCTGGCCGCGGTAGAAGCAGTGGCGCAGGTCCGAGGGCCCTaGGTCGCTCTCCCAGGCCCCGCGCTCCGGGGTTCCCAAGTGCAC +
Preference number: 5 (lower is better)
Translates to: VDLAAVEAVAQVRGP*VALPGPALRGSQVH
Trigger: GTGCACTTGGGAACCCCGGAGCGCGGGGCCTGGGAGAGCGACGCAGGGCCCTCGGACCTGCGCCACTGCTTCTACCGCGGCCAGGTCAAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000553158.5
CDS GCA 90 bp CGGGGTTCCCAAGTGCACCTCGGTGTAGCCGGCGGCCAGAAAGGATaGATCGGCGGTCAGGTTCAGCTGGAAGAGCTGCCCGTAGGCAGT +
Preference number: 5 (lower is better)
Translates to: RGSQVHLGVAGGQKG*IGGQVQLEELPVGS
Trigger: ACTGCCTACGGGCAGCTCTTCCAGCTGAACCTGACCGCCGATGCATCCTTTCTGGCCGCCGGCTACACCGAGGTGCACTTGGGAACCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000553158.5
CDS TCA 90 bp ATGCATCGGCGGTCAGGTTCAGCTGGAAGAGCTGCCCGTAGGCAGTaGAGCGATAGTGGGTTCGGAACGGCATGGGTTCCAGCGCCTCGG +
Preference number: 5 (lower is better)
Translates to: MHRRSGSAGRAARRQ*SDSGFGTAWVPAPR
Trigger: CCGAGGCGCTGGAACCCATGCCGTTCCGAACCCACTATCGCTTCACTGCCTACGGGCAGCTCTTCCAGCTGAACCTGACCGCCGATGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000553158.5
CDS TCA 90 bp TCCAGCGCCTCGGAGCTGCGTTTCTGCCGGCTGAAGTGGTGGCTCTaGGGGAACACTTCTCCAAACTCATTGACCCGCTCGGGGATCACT +
Preference number: 5 (lower is better)
Translates to: SSASELRFCRLKWWL*GNTSPNSLTRSGIT
Trigger: AGTGATCCCCGAGCGGGTCAATGAGTTTGGAGAAGTGTTCCCTCAGAGCCACCACTTCAGCCGGCAGAAACGCAGCTCCGAGGCGCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000553158.5
CDS CCA 90 bp CCCATGACGGCAATGCATTCCAGGACCGCAGTCTGTTCCATCTGCTaGTGGCACGTGTTGAGTGAAACAGCCTTTGTGAAGCTTTTCTGT +
Preference number: 5 (lower is better)
Translates to: PMTAMHSRTAVCSIC*WHVLSETAFVKLFC
Trigger: ACAGAAAAGCTTCACAAAGGCTGTTTCACTCAACACGTGCCACCAGCAGATGGAACAGACTGCGGTCCTGGAATGCATTGCCGTCATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000553158.5
CDS TCA 90 bp TTCCAGGACCGCAGTCTGTTCCATCTGCTGGTGGCACGTGTTGAGTaGAACAGCCTTTGTGAAGCTTTTCTGTGCTTGTGCACCACAGAT +
Preference number: 5 (lower is better)
Translates to: FQDRSLFHLLVARVE*NSLCEAFLCLCTTD
Trigger: ATCTGTGGTGCACAAGCACAGAAAAGCTTCACAAAGGCTGTTTCACTCAACACGTGCCACCAGCAGATGGAACAGACTGCGGTCCTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000553158.5
CDS CCA 90 bp ATGACGGCAATGCATTCCAGGACCGCAGTCTGTTCCATCTGCTGGTaGCACGTGTTGAGTGAAACAGCCTTTGTGAAGCTTTTCTGTGCT +
Preference number: 5 (lower is better)
Translates to: MTAMHSRTAVCSICW*HVLSETAFVKLFCA
Trigger: AGCACAGAAAAGCTTCACAAAGGCTGTTTCACTCAACACGTGCCACCAGCAGATGGAACAGACTGCGGTCCTGGAATGCATTGCCGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000553158.5
CDS CCA 90 bp GCACACAGTCCTGACTCCAACATCGCCTCTGAGAACAAGGTCGGGTaGACTGATCACACATTTCTTCAACCACCTGACCAACACCTTTCA +
Preference number: 5 (lower is better)
Translates to: AHSPDSNIASENKVG*TDHTFLQPPDQHLS
Trigger: TGAAAGGTGTTGGTCAGGTGGTTGAAGAAATGTGTGATCAGTCCACCCGACCTTGTTCTCAGAGGCGATGTTGGAGTCAGGACTGTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS GCA 90 bp ACTGATCACACATTTCTTCAACCACCTGACCAACACCTTTCAGTCTaGAGTATACATCCCTCTGCTGAACTCCAGAGCCACAGGTCACAG +
Preference number: 5 (lower is better)
Translates to: TDHTFLQPPDQHLSV*SIHPSAELQSHRSQ
Trigger: CTGTGACCTGTGGCTCTGGAGTTCAGCAGAGGGATGTATACTGCAGACTGAAAGGTGTTGGTCAGGTGGTTGAAGAAATGTGTGATCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS CCA 90 bp GTTTCTTCGCTGAAGACCTTGACACATTTTGGTACAGCCTTCCCATaGTCCATAGGGGTCCCATGTGAACATGTCACTCCTCTCTTCCAA +
Preference number: 5 (lower is better)
Translates to: VSSLKTLTHFGTAFP*SIGVPCEHVTPLFQ
Trigger: TTGGAAGAGAGGAGTGACATGTTCACATGGGACCCCTATGGACCATGGGAAGGCTGTACCAAAATGTGTCAAGGTCTTCAGCGAAGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000549670.5
ENST00000553158.5
CDS TCA 90 bp ATTACAGCGCCTGGTTGCACTTTCGATTCCGCCTCCACATGTTCTTaGACAAGAACTGTAAGGTTCCCATGGTCCCCATTCACCATTTAC +
Preference number: 5 (lower is better)
Translates to: ITAPGCTFDSASTCS*TRTVRFPWSPFTIY
Trigger: GTAAATGGTGAATGGGGACCATGGGAACCTTACAGTTCTTGTTCAAGAACATGTGGAGGCGGAATCGAAAGTGCAACCAGGCGCTGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000553158.5
CDS TCA 90 bp AACACTGCACTAGCTAGCTCATTGACACATTTAACATCTCGCATCTaGTACCCATGTCCACATGTGGTTGTGCAAGGACCCCATGGTCCT +
Preference number: 5 (lower is better)
Translates to: NTALASSLTHLTSRI*YPCPHVVVQGPHGP
Trigger: AGGACCATGGGGTCCTTGCACAACCACATGTGGACATGGGTATCAGATGCGAGATGTTAAATGTGTCAATGAGCTAGCTAGTGCAGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000549670.5
ENST00000553158.5
CDS GCA 90 bp ATATGGGGACACATTTGTGACCCAGGACCAAACGCAAGCTCACACTaGTTGTTTCCATCATATCGTGATCCAGGAAGTTCTGAAGGCAGA +
Preference number: 5 (lower is better)
Translates to: IWGHICDPGPNASSH*LFPSYRDPGSSEGR
Trigger: TCTGCCTTCAGAACTTCCTGGATCACGATATGATGGAAACAAGCAGTGTGAGCTTGCGTTTGGTCCTGGGTCACAAATGTGTCCCCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000553158.5
CDS-3UTR CAA 90 bp AAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATCCTCACCAGGGCTTCTaGCCTGGGGTGGAAGTCAAC +
Preference number: 5 (lower is better)
Translates to: KISVVQAKMLRATLSWYNPHQGF*PGVEVN
Trigger: GTTGACTTCCACCCCAGGCAAGAAGCCCTGGTGAGG...ATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CAA 90 bp AGGTATAAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGACTTCTCCAAACTCATaGACCCGCTCGGGGATCACT +
Preference number: 5 (lower is better)
Translates to: RYKISVVQAKMLRATLSWTSPNS*TRSGIT
Trigger: AGTGATCCCCGAGCGGGTCAATGAGTTTGGAGAAGT...CCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTTATACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CAA 90 bp AGGTATAAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTGCTGGTGGCACGTGTaGAGTGAAACAGCCTTTGTG +
Preference number: 5 (lower is better)
Translates to: RYKISVVQAKMLRATLSWCWWHV*SETAFV
Trigger: CACAAAGGCTGTTTCACTCAACACGTGCCACCAGCA...CCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTTATACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CAA 90 bp AGGTATAAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGGTCTTGCATGAAGAGTaGTCCCCACCACACACTCCA +
Preference number: 5 (lower is better)
Translates to: RYKISVVQAKMLRATLSWVLHEE*SPPHTP
Trigger: TGGAGTGTGTGGTGGGGACAACTCTTCATGCAAGAC...CCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTTATACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CAA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGCATGTCCACATGTGGTaGTGCAAGGACCCCATGGTC +
Preference number: 5 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTHVHMW*CKDPMV
Trigger: GACCATGGGGTCCTTGCACAACCACATGTGGACATG...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS TCA 90 bp CAATTTCACTTTAAGATCCTCCGATGTCCATGGTTCCTGATGCCATaGCACATCAGCAGGGCAAGCATGCATATGACACTGTATTACGCT +
Preference number: 5 (lower is better)
Translates to: QFHFKILRCPWFLMP*HISRASMHMTLYYA
Trigger: AGCGTAATACAGTGTCATATGCATGCTTGCCCTGCTGATGTGTCATGGCATCAGGAACCATGGACATCGGAGGATCTTAAAGTGAAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395541.3
ENST00000549670.5
ENST00000553158.5
CDS-3UTR CAA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGACCCCATGGTCCTACTaGCCAGGAAGCACATGTATG +
Preference number: 5 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTTPWSY*PGSTCM
Trigger: CATACATGTGCTTCCTGGCAAGTAGGACCATGGGGT...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR CAA 90 bp AAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATCATGTCCACATGTGGTaGTGCAAGGACCCCATGGTC +
Preference number: 5 (lower is better)
Translates to: KISVVQAKMLRATLSWYNHVHMW*CKDPMV
Trigger: GACCATGGGGTCCTTGCACAACCACATGTGGACATG...ATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS GCA 90 bp TGCCTTTTGGACATGAATCAGTATTACATGATCGAAATTTCATCCTaGGGCCCACACAGTAATTTCCTCCGTTTCTTGGCTCAGGACGAT +
Preference number: 5 (lower is better)
Translates to: CLLDMNQYYMIEISS*GPHSNFLRFLAQDD
Trigger: ATCGTCCTGAGCCAAGAAACGGAGGAAATTACTGTGTGGGCCGCAGGATGAAATTTCGATCATGTAATACTGATTCATGTCCAAAAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000553158.5
CDS-3UTR CAA 90 bp GCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCAATCCTGGTATTGATTACAGCGCCTGGTaGCACTTTCGATTCCGCCTC +
Preference number: 5 (lower is better)
Translates to: AKMLRATLSWYNSFNPGIDYSAW*HFRFRL
Trigger: GAGGCGGAATCGAAAGTGCAACCAGGCGCTGTAATC...AATACCAGGATTGAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CAA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGCACTCGGGACAGTTCTaGGCATTCATTGTCAGCAAG +
Preference number: 5 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTHSGQF*AFIVSK
Trigger: CTTGCTGACAATGAATGCCAAGAACTGTCCCGAGTG...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR CAA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGGCTTACATAGCGGGCTaGAGTACCTCTTCCACAAGA +
Preference number: 5 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTAYIAG*STSSTR
Trigger: TCTTGTGGAAGAGGTACTCAAGCCCGCTATGTAAGC...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR CAA 90 bp AAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATGAAGCTTTTCTGTGCTaGTGCACCACAGATGCATGC +
Preference number: 5 (lower is better)
Translates to: KISVVQAKMLRATLSWYNEAFLC*CTTDAC
Trigger: GCATGCATCTGTGGTGCACAAGCACAGAAAAGCTTC...ATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CAA 90 bp TATAAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATGACGAATGTCAACGTTaGTTGCTCCTGCGGGAATCT +
Preference number: 5 (lower is better)
Translates to: YKISVVQAKMLRATLSWYDECQR*LLLRES
Trigger: AGATTCCCGCAGGAGCAACAAACGTTGACATTCGTC...ATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CAA 90 bp AGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCGTAACTGTCATCTGGTaGTCCAGAATAGCTGTACTG +
Preference number: 5 (lower is better)
Translates to: SVVQAKMLRATLSWYNSFVTVIW*SRIAVL
Trigger: CAGTACAGCTATTCTGGACAACCAGATGACAGTTAC...GAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CAA 90 bp CAGTTATTTGAATATTCCAGAGAATATCCCCTCTTTAGGGCATACTTCCCCCTTTCTTCGCTGAAGACCTaGACACATTTTGGTACAGCC +
Preference number: 5 (lower is better)
Translates to: QLFEYSREYPLFRAYFPLSSLKT*THFGTA
Trigger: GGCTGTACCAAAATGTGTCAAGGTCTTCAGCGAAGA...AAGGGGGAAGTATGCCCTAAAGAGGGGATATTCTCTGGAATATTCAAATAACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CAA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGTCTTCGCTGAAGACCTaGACACATTTTGGTACAGCC +
Preference number: 5 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTSSLKT*THFGTA
Trigger: GGCTGTACCAAAATGTGTCAAGGTCTTCAGCGAAGA...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR CAA 90 bp AGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCGTAGTGGTCATCAACTaGAACAGTCTGTCCTTCATG +
Preference number: 5 (lower is better)
Translates to: SVVQAKMLRATLSWYNSFVVVIN*NSLSFM
Trigger: CATGAAGGACAGACTGTTCAAGTTGATGACCACTAC...GAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CAA 90 bp TATAAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATCACTCGGGACAGTTCTaGGCATTCATTGTCAGCAAG +
Preference number: 5 (lower is better)
Translates to: YKISVVQAKMLRATLSWYHSGQF*AFIVSK
Trigger: CTTGCTGACAATGAATGCCAAGAACTGTCCCGAGTG...ATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CAA 90 bp GCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCAATCCTGGTATTACCCCATGGTCCTACTaGCCAGGAAGCACATGTATG +
Preference number: 5 (lower is better)
Translates to: AKMLRATLSWYNSFNPGITPWSY*PGSTCM
Trigger: CATACATGTGCTTCCTGGCAAGTAGGACCATGGGGT...AATACCAGGATTGAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CAA 90 bp AGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCGCACTAGCTAGCTCATaGACACATTTAACATCTCGC +
Preference number: 5 (lower is better)
Translates to: SVVQAKMLRATLSWYNSFALASS*THLTSR
Trigger: GCGAGATGTTAAATGTGTCAATGAGCTAGCTAGTGC...GAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CAA 90 bp AAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATGCTTACATAGCGGGCTaGAGTACCTCTTCCACAAGA +
Preference number: 5 (lower is better)
Translates to: KISVVQAKMLRATLSWYNAYIAG*STSSTR
Trigger: TCTTGTGGAAGAGGTACTCAAGCCCGCTATGTAAGC...ATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CAA 90 bp AGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCGCAGTAACTAGCACTTaGTCCATTTTCATCCTGGCA +
Preference number: 5 (lower is better)
Translates to: SVVQAKMLRATLSWYNSFAVTST*SIFILA
Trigger: TGCCAGGATGAAAATGGACAAAGTGCTAGTTACTGC...GAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CAA 90 bp CAGTTATTTGAATATTCCAGAGAATATCCCCTCTTTAGGGCATACTTCCCCCTTGCAGCTAAGTGTCCATaGTCACATTCACAGTCTTCC +
Preference number: 5 (lower is better)
Translates to: QLFEYSREYPLFRAYFPLAAKCP*SHSQSS
Trigger: GGAAGACTGTGAATGTGACAATGGACACTTAGCTGC...AAGGGGGAAGTATGCCCTAAAGAGGGGATATTCTCTGGAATATTCAAATAACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS GCA 90 bp CTTCAGGATCACAGTAATTCTCATCAATTGGCTGATGGTAGTTCATaGATAAAACTTGTCGAGTTGTTTTTCCATGGCCACAGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: LQDHSNSHQLADGSS*IKLVELFFHGHRKL
Trigger: CAGCTTCCTGTGGCCATGGAAAAACAACTCGACAAGTTTTATGCATGAACTACCATCAGCCAATTGATGAGAATTACTGTGATCCTGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000549670.5
ENST00000553158.5
CDS CCA 90 bp CACCACAGTAGTGGTCATCAACTTGAACAGTCTGTCCTTCATGAATaGAATACTTCATGCAATGGATGTCCAAGGTTCTATATCCTTGAC +
Preference number: 5 (lower is better)
Translates to: HHSSGHQLEQSVLHE*NTSCNGCPRFYILD
Trigger: GTCAAGGATATAGAACCTTGGACATCCATTGCATGAAGTATTCCATTCATGAAGGACAGACTGTTCAAGTTGATGACCACTACTGTGGTG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000549670.5
ENST00000553158.5
CDS CCA 90 bp CAGGAAAATTCATTGCAATTCTCTCTCGTCACTCGGGACAGTTCTTaGCATTCATTGTCAGCAAGACGATGGCCAAAGTTATTCATACAA +
Preference number: 5 (lower is better)
Translates to: QENSLQFSLVTRDSS*HSLSARRWPKLFIQ
Trigger: TTGTATGAATAACTTTGGCCATCGTCTTGCTGACAATGAATGCCAAGAACTGTCCCGAGTGACGAGAGAGAATTGCAATGAATTTTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000549670.5
ENST00000553158.5
CDS-3UTR CAA 90 bp AAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATATTTCCGACTACAGTTaGACCAGCTCCAAGGACTCA +
Preference number: 5 (lower is better)
Translates to: KISVVQAKMLRATLSWYNISDYS*TSSKDS
Trigger: TGAGTCCTTGGAGCTGGTCAAACTGTAGTCGGAAAT...ATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CAA 90 bp AGGTATAAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGATTTCTTCATCTGGTTaGTCAAGAAGACATTCCCCG +
Preference number: 5 (lower is better)
Translates to: RYKISVVQAKMLRATLSWISSSG*SRRHSP
Trigger: CGGGGAATGTCTTCTTGACAAACCAGATGAAGAAAT...CCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTTATACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CAA 90 bp AAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTGCCATACACTGGCCTaGAACACAGATGTCATGAGT +
Preference number: 5 (lower is better)
Translates to: KISVVQAKMLRATLSWYNCHTLA*NTDVMS
Trigger: ACTCATGACATCTGTGTTCAAGGCCAGTGTATGGCA...ATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CAA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGGTAGTGGTCATCAACTaGAACAGTCTGTCCTTCATG +
Preference number: 5 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTVVVIN*NSLSFM
Trigger: CATGAAGGACAGACTGTTCAAGTTGATGACCACTAC...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR CAA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGGCACTAGCTAGCTCATaGACACATTTAACATCTCGC +
Preference number: 5 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTALASS*THLTSR
Trigger: GCGAGATGTTAAATGTGTCAATGAGCTAGCTAGTGC...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR CAA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGGCAGTAACTAGCACTTaGTCCATTTTCATCCTGGCA +
Preference number: 5 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTAVTST*SIFILA
Trigger: TGCCAGGATGAAAATGGACAAAGTGCTAGTTACTGC...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR CAA 90 bp AGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCGGGTTCCTGCAATTCTaGGATGTAAGAGATATGGTT +
Preference number: 5 (lower is better)
Translates to: SVVQAKMLRATLSWYNSFGFLQF*DVRDMV
Trigger: AACCATATCTCTTACATCCAAGAATTGCAGGAACCC...GAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS TCA 90 bp CCACACACTCCACATTTGTCTATCTTGGCACTGGAGTTTAACACGTaGTCACAACCAGCTGCCTTCAAGACACAATTACAATCAATATTA +
Preference number: 5 (lower is better)
Translates to: PHTPHLSILALEFNT*SQPAAFKTQLQSIL
Trigger: TAATATTGATTGTAATTGTGTCTTGAAGGCAGCTGGTTGTGATCACGTGTTAAACTCCAGTGCCAAGATAGACAAATGTGGAGTGTGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395541.3
CDS TCA 90 bp TGGCAAAATATGTTTTTCATTAGTTCCCACAAGATGATGGTCCTTTaGGGCAGCAATTTCACTTTAAGATCCTCCGATGTCCATGGTTCC +
Preference number: 5 (lower is better)
Translates to: WQNMFFISSHKMMVL*GSNFTLRSSDVHGS
Trigger: GGAACCATGGACATCGGAGGATCTTAAAGTGAAATTGCTGCCTCAAAGGACCATCATCTTGTGGGAACTAATGAAAAACATATTTTGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395541.3
ENST00000549670.5
ENST00000553158.5
CDS GCA 90 bp GGAATGCCACTGATGTCCAAATGTTTACCATTAAAATCAGAGCACTaGTTCTCTCGAAAGTCTTGTGTGCCTTTTGGACATGAATCAGTA +
Preference number: 5 (lower is better)
Translates to: GMPLMSKCLPLKSEH*FSRKSCVPFGHESV
Trigger: TACTGATTCATGTCCAAAAGGCACACAAGACTTTCGAGAGAAGCAGTGCTCTGATTTTAATGGTAAACATTTGGACATCAGTGGCATTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000553158.5
CDS-3UTR CAA 90 bp AAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATCGCCTCCACATGTTCTaGAACAAGAACTGTAAGGTT +
Preference number: 5 (lower is better)
Translates to: KISVVQAKMLRATLSWYNRLHMF*NKNCKV
Trigger: AACCTTACAGTTCTTGTTCAAGAACATGTGGAGGCG...ATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CAA 90 bp TATAAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATGTTTACAACGATCCTTaGTGCCAATGCCACTGTATC +
Preference number: 5 (lower is better)
Translates to: YKISVVQAKMLRATLSWYVYNDP*CQCHCI
Trigger: GATACAGTGGCATTGGCACAAAGGATCGTTGTAAAC...ATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CAA 90 bp AAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATCCACATTTGTCTATCTaGGCACTGGAGTTTAACACG +
Preference number: 5 (lower is better)
Translates to: KISVVQAKMLRATLSWYNPHLSI*ALEFNT
Trigger: CGTGTTAAACTCCAGTGCCAAGATAGACAAATGTGG...ATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CAA 90 bp AAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATACACCTGTTATTGTCTaGCATGAAGAGTTGTCCCCA +
Preference number: 5 (lower is better)
Translates to: KISVVQAKMLRATLSWYNTPVIV*HEELSP
Trigger: TGGGGACAACTCTTCATGCAAGACAATAACAGGTGT...ATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CAA 90 bp TCTCGGGAAGGGAGATATAAAGAAATGAGCACCAGTTATTTGAATATTCCAGAGGAATGTCAACGTTTGTaGCTCCTGCGGGAATCTTTA +
Preference number: 5 (lower is better)
Translates to: SREGRYKEMSTSYLNIPEECQRL*LLRESL
Trigger: TAAAGATTCCCGCAGGAGCAACAAACGTTGACATTC...CTCTGGAATATTCAAATAACTGGTGCTCATTTCTTTATATCTCCCTTCCCGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CAA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGGGACAGGAAAATTCATaGCAATTCTCTCTCGTCACT +
Preference number: 5 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTGQENS*QFSLVT
Trigger: AGTGACGAGAGAGAATTGCAATGAATTTTCCTGTCC...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR CAA 90 bp AGGTATAAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGCTCAGAGATTCAGGTTaGGTACTTGAATTACAGAAG +
Preference number: 5 (lower is better)
Translates to: RYKISVVQAKMLRATLSWLRDSG*VLELQK
Trigger: CTTCTGTAATTCAAGTACCAAACCTGAATCTCTGAG...CCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTTATACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CAA 90 bp CAGTTATTTGAATATTCCAGAGAATATCCCCTCTTTAGGGCATACTTCCCCCTTATAAAACTTGTCGAGTaGTTTTTCCATGGCCACAGG +
Preference number: 5 (lower is better)
Translates to: QLFEYSREYPLFRAYFPLIKLVE*FFHGHR
Trigger: CCTGTGGCCATGGAAAAACAACTCGACAAGTTTTAT...AAGGGGGAAGTATGCCCTAAAGAGGGGATATTCTCTGGAATATTCAAATAACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CAA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGATAAAACTTGTCGAGTaGTTTTTCCATGGCCACAGG +
Preference number: 5 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTIKLVE*FFHGHR
Trigger: CCTGTGGCCATGGAAAAACAACTCGACAAGTTTTAT...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR CAA 90 bp TATAAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATTTCTCTCACATGATGTaGAACAATTCAGCCTCCCTC +
Preference number: 5 (lower is better)
Translates to: YKISVVQAKMLRATLSWYFSHMM*NNSASL
Trigger: GAGGGAGGCTGAATTGTTCAACATCATGTGAGAGAA...ATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CAA 90 bp GCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCAATCCTGGTATTCACCACAGGGCATTCTaGATAAACTATAGGCCGAAG +
Preference number: 5 (lower is better)
Translates to: AKMLRATLSWYNSFNPGIHHRAF*INYRPK
Trigger: CTTCGGCCTATAGTTTATCAAGAATGCCCTGTGGTG...AATACCAGGATTGAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CAA 90 bp AAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATCAGTACCCTCCACATTaGCCGAAAAATCTAGTTCCA +
Preference number: 5 (lower is better)
Translates to: KISVVQAKMLRATLSWYNQYPPH*PKNLVP
Trigger: TGGAACTAGATTTTTCGGCAAATGTGGAGGGTACTG...ATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CAA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGCAAGATGATGGTCCTTaGAGGCAGCAATTTCACTTT +
Preference number: 5 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTQDDGP*RQQFHF
Trigger: AAAGTGAAATTGCTGCCTCAAAGGACCATCATCTTG...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS GCA 90 bp ATCTGGTTGTCCAGAATAGCTGTACTGACGAATGTCAACGTTTGTTaGTCCTGCGGGAATCTTTACAACAACATTATAACCATAATGAGA +
Preference number: 5 (lower is better)
Translates to: IWLSRIAVLTNVNVC*SCGNLYNNIITIMR
Trigger: TCTCATTATGGTTATAATGTTGTTGTAAAGATTCCCGCAGGAGCAACAAACGTTGACATTCGTCAGTACAGCTATTCTGGACAACCAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000553158.5
CDS CCA 90 bp AGGAAGCACATGTATGAAGTTCACATGGACTCAGAGATTCAGGTTTaGTACTTGAATTACAGAAGCCATCACTCAAGTGATCTACATTCA +
Preference number: 5 (lower is better)
Translates to: RKHMYEVHMDSEIQV*YLNYRSHHSSDLHS
Trigger: TGAATGTAGATCACTTGAGTGATGGCTTCTGTAATTCAAGTACCAAACCTGAATCTCTGAGTCCATGTGAACTTCATACATGTGCTTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000549670.5
ENST00000553158.5
CDS-3UTR CAA 90 bp GCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCAATCCTGGTATTAGGATTATCATCATGTaGAACACCAAGTGTGTGCCC +
Preference number: 5 (lower is better)
Translates to: AKMLRATLSWYNSFNPGIRIIIM*NTKCVP
Trigger: GGGCACACACTTGGTGTTCAACATGATGATAATCCT...AATACCAGGATTGAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CAA 90 bp TATAGGTATAAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTGGACAGGAAAATTCATaGCAATTCTCTCTCGTCACT +
Preference number: 5 (lower is better)
Translates to: YRYKISVVQAKMLRATLSGQENS*QFSLVT
Trigger: AGTGACGAGAGAGAATTGCAATGAATTTTCCTGTCC...AGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTTATACCTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CAA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGATTCAGGTTTGGTACTaGAATTACAGAAGCCATCAC +
Preference number: 5 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTIQVWY*NYRSHH
Trigger: GTGATGGCTTCTGTAATTCAAGTACCAAACCTGAAT...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR CAA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGCTCAGAGATTCAGGTTaGGTACTTGAATTACAGAAG +
Preference number: 5 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTLRDSG*VLELQK
Trigger: CTTCTGTAATTCAAGTACCAAACCTGAATCTCTGAG...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR CAA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGAGTAATTCTCATCAATaGGCTGATGGTAGTTCATGC +
Preference number: 5 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTSNSHQ*ADGSSC
Trigger: GCATGAACTACCATCAGCCAATTGATGAGAATTACT...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR CAA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGATTACGCTAGGTGGCTaGTTTACAATTTCACAGTTG +
Preference number: 5 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTITLGG*FTISQL
Trigger: CAACTGTGAAATTGTAAACAAGCCACCTAGCGTAAT...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS-3UTR CAA 90 bp GCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCAATCCTGGTATTACAGCTGTTAATGCATaGGTAAACCTGAGAGGAAGG +
Preference number: 5 (lower is better)
Translates to: AKMLRATLSWYNSFNPGITAVNA*VNLRGR
Trigger: CCTTCCTCTCAGGTTTACCAATGCATTAACAGCTGT...AATACCAGGATTGAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CAA 90 bp AGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATTCATTCAAATGTTCATATGACTaGAATTGGGAGACCAGTAGT +
Preference number: 5 (lower is better)
Translates to: SVVQAKMLRATLSWYNSFKCSYD*NWETSS
Trigger: ACTACTGGTCTCCCAATTCAAGTCATATGAACATTT...GAATGAATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CAA 90 bp ATTGCAACTAATCAATGCTACTGCTGTAGTGCAAAACCAGCCATAGATAACACGAGAAATATGTTTCAATaGTCTCTGGATCACAGTGCC +
Preference number: 5 (lower is better)
Translates to: IATNQCYCCSAKPAIDNTRNMFQ*SLDHSA
Trigger: GGCACTGTGATCCAGAGACAATTGAAACATATTTCT...CGTGTTATCTATGGCTGGTTTTGCACTACAGCAGTAGCATTGATTAGTTGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS TCA 90 bp TTGCCAATAACATGCCACCTTAGTTCACAGTCTGTATTGCAACTTTaGGTAACAAATGATGGAAGTGGCAAGTGGTCACATTCTTTATCA +
Preference number: 5 (lower is better)
Translates to: LPITCHLSSQSVLQL*VTNDGSGKWSHSLS
Trigger: TGATAAAGAATGTGACCACTTGCCACTTCCATCATTTGTTACTCAAAGTTGCAATACAGACTGTGAACTAAGGTGGCATGTTATTGGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000549670.5
ENST00000553158.5
CDS GCA 90 bp TTGTCCAGAATAGCTGTACTGACGAATGTCAACGTTTGTTGCTCCTaGGGGAATCTTTACAACAACATTATAACCATAATGAGAACTGTT +
Preference number: 5 (lower is better)
Translates to: LSRIAVLTNVNVCCS*GNLYNNIITIMRTV
Trigger: AACAGTTCTCATTATGGTTATAATGTTGTTGTAAAGATTCCCGCAGGAGCAACAAACGTTGACATTCGTCAGTACAGCTATTCTGGACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000553158.5
CDS GCA 90 bp CTTGACTGCAATTTGTGTCTTCTAATTTCCTTTGGAATTGGTCAATaGAAAACACTTCACGGTACTTTCTACCTTTACCACAAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: LDCNLCLLISFGIGQ*KTLHGTFYLYHKKL
Trigger: CAGCTTCTTGTGGTAAAGGTAGAAAGTACCGTGAAGTGTTTTGCATTGACCAATTCCAAAGGAAATTAGAAGACACAAATTGCAGTCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS CCA 90 bp AAGGAGTACCATCTTCAACCATATCCTTCAATAGGTAGAAATAATTaGTTCCAGCAACCTGACAATAGAGTTTACAACGATCCTTTGTGC +
Preference number: 5 (lower is better)
Translates to: KEYHLQPYPSIGRNN*FQQPDNRVYNDPLC
Trigger: GCACAAAGGATCGTTGTAAACTCTATTGTCAGGTTGCTGGAACCAATTATTTCTACCTATTGAAGGATATGGTTGAAGATGGTACTCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000553158.5
CDS CCA 90 bp ATAAACTATAGGCCGAAGTCGATGGAGCTTATGTTTCTTAGTAGATaGGATCTCGGTGCAATATGTAATCCTTTGTCTGTAACTAAATCC +
Preference number: 5 (lower is better)
Translates to: INYRPKSMELMFLSR*DLGAICNPLSVTKS
Trigger: GGATTTAGTTACAGACAAAGGATTACATATTGCACCGAGATCCCATCTACTAAGAAACATAAGCTCCATCGACTTCGGCCTATAGTTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CAA 90 bp CAGTTATTTGAATATTCCAGAGAATATCCCCTCTTTAGGGCATACTTCCCCCTTAGTCAGTATATAGTTTaGCAAATTCGATCCATGAGC +
Preference number: 5 (lower is better)
Translates to: QLFEYSREYPLFRAYFPLSQYIV*QIRSMS
Trigger: GCTCATGGATCGAATTTGCAAAACTATATACTGACT...AAGGGGGAAGTATGCCCTAAAGAGGGGATATTCTCTGGAATATTCAAATAACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CAA 90 bp TATAGGTATAAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTAGTCTTGTGTGCCTTTaGGACATGAATCAGTATTAC +
Preference number: 5 (lower is better)
Translates to: YRYKISVVQAKMLRATLSSLVCL*DMNQYY
Trigger: GTAATACTGATTCATGTCCAAAAGGCACACAAGACT...AGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTTATACCTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CAA 90 bp TCTCGGGAAGGGAGATATAAAGAAATGAGCACCAGTTATTTGAATATTCCAGAGATTCAGGTTTGGTACTaGAATTACAGAAGCCATCAC +
Preference number: 5 (lower is better)
Translates to: SREGRYKEMSTSYLNIPEIQVWY*NYRSHH
Trigger: GTGATGGCTTCTGTAATTCAAGTACCAAACCTGAAT...CTCTGGAATATTCAAATAACTGGTGCTCATTTCTTTATATCTCCCTTCCCGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CAA 90 bp AAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATAATAGTAATTCTCATCAATaGGCTGATGGTAGTTCATGC +
Preference number: 5 (lower is better)
Translates to: KISVVQAKMLRATLSWYNSNSHQ*ADGSSC
Trigger: GCATGAACTACCATCAGCCAATTGATGAGAATTACT...ATTATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CAA 90 bp TATAGGTATAAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTATTACGCTAGGTGGCTaGTTTACAATTTCACAGTTG +
Preference number: 5 (lower is better)
Translates to: YRYKISVVQAKMLRATLSITLGG*FTISQL
Trigger: CAACTGTGAAATTGTAAACAAGCCACCTAGCGTAAT...AGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTTATACCTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CAA 90 bp TCTCGGGAAGGGAGATATAAAGAAATGAGCACCAGTTATTTGAATATTCCAGAGATTCACTTGTCTGATTaGGTTATCTGTGCACTCCAT +
Preference number: 5 (lower is better)
Translates to: SREGRYKEMSTSYLNIPEIHLSD*VICALH
Trigger: ATGGAGTGCACAGATAACCAAATCAGACAAGTGAAT...CTCTGGAATATTCAAATAACTGGTGCTCATTTCTTTATATCTCCCTTCCCGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CAA 90 bp AAATCTCGGGAAGGGAGATATAAAGAAATGAGCACCAGTTATTTGAATATTCCACAAGTCACTGAGCACTaGCTCCATTTTCCAACTTTC +
Preference number: 5 (lower is better)
Translates to: KSREGRYKEMSTSYLNIPQVTEH*LHFPTF
Trigger: GAAAGTTGGAAAATGGAGCAAGTGCTCAGTGACTTG...TGGAATATTCAAATAACTGGTGCTCATTTCTTTATATCTCCCTTCCCGAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CAA 90 bp TCTCGGGAAGGGAGATATAAAGAAATGAGCACCAGTTATTTGAATATTCCAGAGCTGGACAAACCATGTTaGGTAATGCATTTCACTTGT +
Preference number: 5 (lower is better)
Translates to: SREGRYKEMSTSYLNIPELDKPC*VMHFTC
Trigger: ACAAGTGAAATGCATTACCAAACATGGTTTGTCCAG...CTCTGGAATATTCAAATAACTGGTGCTCATTTCTTTATATCTCCCTTCCCGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS TCA 90 bp ATTTCATTCACTTGTCTGATTTGGTTATCTGTGCACTCCATTCGTTaGTGTGAATCTTTTCTCTCACATGATGTTGAACAATTCAGCCTC +
Preference number: 5 (lower is better)
Translates to: ISFTCLIWLSVHSIR*CESFLSHDVEQFSL
Trigger: GAGGCTGAATTGTTCAACATCATGTGAGAGAAAAGATTCACATCAACGAATGGAGTGCACAGATAACCAAATCAGACAAGTGAATGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS GCA 90 bp GGTCACATTCTTTATCAGACACAACACTATGATCACTCTTATGTATaGAAGTTATGTTTCTTCGCTGAAGACCTTGACACATTTTGGTAC +
Preference number: 5 (lower is better)
Translates to: GHILYQTQHYDHSYV*KLCFFAEDLDTFWY
Trigger: GTACCAAAATGTGTCAAGGTCTTCAGCGAAGAAACATAACTTGCATACATAAGAGTGATCATAGTGTTGTGTCTGATAAAGAATGTGACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000549670.5
ENST00000553158.5
CDS-3UTR CAA 90 bp TCTCGGGAAGGGAGATATAAAGAAATGAGCACCAGTTATTTGAATATTCCAGAGGGTAATGCATTTCACTaGTCTCTTCATTATCCCAAT +
Preference number: 5 (lower is better)
Translates to: SREGRYKEMSTSYLNIPEGNAFH*SLHYPN
Trigger: ATTGGGATAATGAAGAGACAAGTGAAATGCATTACC...CTCTGGAATATTCAAATAACTGGTGCTCATTTCTTTATATCTCCCTTCCCGAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS-3UTR CAA 90 bp TATAAAATAAGTGTGGTCCAGGCCAAGATGTTAAGAGCAACACTGTCTTGGTATGTCCGTAGTTTTAATTaGCATGGAAGTGAGATCAAT +
Preference number: 5 (lower is better)
Translates to: YKISVVQAKMLRATLSWYVRSFN*HGSEIN
Trigger: ATTGATCTCACTTCCATGCAAATTAAAACTACGGAC...ATACCAAGACAGTGTTGCTCTTAACATCTTGGCCTGGACCACACTTATTTTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS TCA 90 bp ATTGCAAGGAGGGTTCCTGCAATTCTTGGATGTAAGAGATATGGTTaGAGAATTATAGACTATTTCATTCACTTGTCTGATTTGGTTATC +
Preference number: 5 (lower is better)
Translates to: IARRVPAILGCKRYG*RIIDYFIHLSDLVI
Trigger: GATAACCAAATCAGACAAGTGAATGAAATAGTCTATAATTCTTCAACCATATCTCTTACATCCAAGAATTGCAGGAACCCTCCTTGCAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS GCA 90 bp CTCCATAGGGATAAGAAATATGTTTCAATTGTCTCTGGATCACAGTaGCTAGGATATAGTAGATGGTCAGTAACGACATTTATTAAATAC +
Preference number: 5 (lower is better)
Translates to: LHRDKKYVSIVSGSQ*LGYSRWSVTTFIKY
Trigger: GTATTTAATAAATGTCGTTACTGACCATCTACTATATCCTAGGCACTGTGATCCAGAGACAATTGAAACATATTTCTTATCCCTATGGAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395541.3
ENST00000549670.5
ENST00000553158.5
CDS CCA 72 bp GCGCCTCAGCAGCCTAGGGAACAGCAGCGCGGGCCCTaGGCCGGCTGGTCCAGCCACACCGCCTGTCTCCGC +
Preference number: 6 (lower is better)
Translates to: APQQPREQQRGP*AGWSSHTACLR
Trigger: GCGGAGACAGGCGGTGTGGCTGGACCAGCCGGCCCAGGGCCCGCGCTGCTGTTCCCTAGGCTGCTGAGGCGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS TCA 72 bp CCGGCTGGTCCAGCCACACCGCCTGTCTCCGCTCGCTaGGCCGCTGCTTCATCGCACTGCAGCCTCACCCCC +
Preference number: 6 (lower is better)
Translates to: PAGPATPPVSAR*AAASSHCSLTP
Trigger: GGGGGTGAGGCTGCAGTGCGATGAAGCAGCGGCTCAGCGAGCGGAGACAGGCGGTGTGGCTGGACCAGCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS CCA 72 bp CCAGTCAGCCACTTGGCCACCCACATGGTTCCACCCTaGGGACCCCGATCGGGGAGGCCCACCAGAGCCGCC +
Preference number: 6 (lower is better)
Translates to: PVSHLATHMVPP*GPRSGRPTRAA
Trigger: GGCGGCTCTGGTGGGCCTCCCCGATCGGGGTCCCCAGGGTGGAACCATGTGGGTGGCCAAGTGGCTGACTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS GCA 72 bp CAAGTGCACCTCGGTGTAGCCGGCGGCCAGAAAGGATaGATCGGCGGTCAGGTTCAGCTGGAAGAGCTGCCC +
Preference number: 6 (lower is better)
Translates to: QVHLGVAGGQKG*IGGQVQLEELP
Trigger: GGGCAGCTCTTCCAGCTGAACCTGACCGCCGATGCATCCTTTCTGGCCGCCGGCTACACCGAGGTGCACTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000553158.5
CDS TCA 72 bp TGGGTTCCAGCGCCTCGGAGCTGCGTTTCTGCCGGCTaGAGTGGTGGCTCTGAGGGAACACTTCTCCAAACT +
Preference number: 6 (lower is better)
Translates to: WVPAPRSCVSAG*SGGSEGTLLQT
Trigger: AGTTTGGAGAAGTGTTCCCTCAGAGCCACCACTTCAGCCGGCAGAAACGCAGCTCCGAGGCGCTGGAACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000553158.5
CDS TCA 72 bp CGGTCAGGTTCAGCTGGAAGAGCTGCCCGTAGGCAGTaGAGCGATAGTGGGTTCGGAACGGCATGGGTTCCA +
Preference number: 6 (lower is better)
Translates to: RSGSAGRAARRQ*SDSGFGTAWVP
Trigger: TGGAACCCATGCCGTTCCGAACCCACTATCGCTTCACTGCCTACGGGCAGCTCTTCCAGCTGAACCTGACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000553158.5
CDS TCA 72 bp TCGGAGCTGCGTTTCTGCCGGCTGAAGTGGTGGCTCTaGGGGAACACTTCTCCAAACTCATTGACCCGCTCG +
Preference number: 6 (lower is better)
Translates to: SELRFCRLKWWL*GNTSPNSLTRS
Trigger: CGAGCGGGTCAATGAGTTTGGAGAAGTGTTCCCTCAGAGCCACCACTTCAGCCGGCAGAAACGCAGCTCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000553158.5
CDS TCA 72 bp AGTGGTGGCTCTGAGGGAACACTTCTCCAAACTCATTaGCCCGCTCGGGGATCACTACTTCGTAGGAGGTCA +
Preference number: 6 (lower is better)
Translates to: SGGSEGTLLQTH*PARGSLLRRRS
Trigger: TGACCTCCTACGAAGTAGTGATCCCCGAGCGGGTCAATGAGTTTGGAGAAGTGTTCCCTCAGAGCCACCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000553158.5
CDS GCA 72 bp ACGGCAATGCATTCCAGGACCGCAGTCTGTTCCATCTaGTGGTGGCACGTGTTGAGTGAAACAGCCTTTGTG +
Preference number: 6 (lower is better)
Translates to: TAMHSRTAVCSI*WWHVLSETAFV
Trigger: CACAAAGGCTGTTTCACTCAACACGTGCCACCAGCAGATGGAACAGACTGCGGTCCTGGAATGCATTGCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000553158.5
CDS CCA 72 bp GCAATGCATTCCAGGACCGCAGTCTGTTCCATCTGCTaGTGGCACGTGTTGAGTGAAACAGCCTTTGTGAAG +
Preference number: 6 (lower is better)
Translates to: AMHSRTAVCSIC*WHVLSETAFVK
Trigger: CTTCACAAAGGCTGTTTCACTCAACACGTGCCACCAGCAGATGGAACAGACTGCGGTCCTGGAATGCATTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000553158.5
CDS CCA 72 bp TTCCTCCGTTTCTTGGCTCAGGACGATTACAGCGCCTaGTTGCACTTTCGATTCCGCCTCCACATGTTCTTG +
Preference number: 6 (lower is better)
Translates to: FLRFLAQDDYSA*LHFRFRLHMFL
Trigger: CAAGAACATGTGGAGGCGGAATCGAAAGTGCAACCAGGCGCTGTAATCGTCCTGAGCCAAGAAACGGAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000553158.5
CDS CAA 72 bp CTCCGTTTCTTGGCTCAGGACGATTACAGCGCCTGGTaGCACTTTCGATTCCGCCTCCACATGTTCTTGAAC +
Preference number: 6 (lower is better)
Translates to: LRFLAQDDYSAW*HFRFRLHMFLN
Trigger: GTTCAAGAACATGTGGAGGCGGAATCGAAAGTGCAACCAGGCGCTGTAATCGTCCTGAGCCAAGAAACGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000553158.5
CDS CAA 72 bp TGGAGGCTTGGAGGCTGCATCGCAGTAACTAGCACTTaGTCCATTTTCATCCTGGCAGACCACAGCCCTATG +
Preference number: 6 (lower is better)
Translates to: WRLGGCIAVTST*SIFILADHSPM
Trigger: CATAGGGCTGTGGTCTGCCAGGATGAAAATGGACAAAGTGCTAGTTACTGCGATGCAGCCTCCAAGCCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000549670.5
ENST00000553158.5
CDS CCA 72 bp ATGCATTCCAGGACCGCAGTCTGTTCCATCTGCTGGTaGCACGTGTTGAGTGAAACAGCCTTTGTGAAGCTT +
Preference number: 6 (lower is better)
Translates to: MHSRTAVCSICW*HVLSETAFVKL
Trigger: AAGCTTCACAAAGGCTGTTTCACTCAACACGTGCCACCAGCAGATGGAACAGACTGCGGTCCTGGAATGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000553158.5
CDS CCA 72 bp CCTGACTCCAACATCGCCTCTGAGAACAAGGTCGGGTaGACTGATCACACATTTCTTCAACCACCTGACCAA +
Preference number: 6 (lower is better)
Translates to: PDSNIASENKVG*TDHTFLQPPDQ
Trigger: TTGGTCAGGTGGTTGAAGAAATGTGTGATCAGTCCACCCGACCTTGTTCTCAGAGGCGATGTTGGAGTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS TCA 72 bp CCTGGTTGCACTTTCGATTCCGCCTCCACATGTTCTTaGACAAGAACTGTAAGGTTCCCATGGTCCCCATTC +
Preference number: 6 (lower is better)
Translates to: PGCTFDSASTCS*TRTVRFPWSPF
Trigger: GAATGGGGACCATGGGAACCTTACAGTTCTTGTTCAAGAACATGTGGAGGCGGAATCGAAAGTGCAACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000553158.5
CDS TCA 72 bp TTACCACAAGAAGCTGAGCACGATGTCCATGGTTCCTaGTGCCATGACACATCAGCAGGGCAAGCATGCATA +
Preference number: 6 (lower is better)
Translates to: LPQEAEHDVHGS*CHDTSAGQACI
Trigger: TATGCATGCTTGCCCTGCTGATGTGTCATGGCATCAGGAACCATGGACATCGTGCTCAGCTTCTTGTGGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS CCA 72 bp CTGAAGACCTTGACACATTTTGGTACAGCCTTCCCATaGTCCATAGGGGTCCCATGTGAACATGTCACTCCT +
Preference number: 6 (lower is better)
Translates to: LKTLTHFGTAFP*SIGVPCEHVTP
Trigger: AGGAGTGACATGTTCACATGGGACCCCTATGGACCATGGGAAGGCTGTACCAAAATGTGTCAAGGTCTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000549670.5
ENST00000553158.5
CDS CAA 72 bp GCCTGGTTGCACTTTCGATTCCGCCTCCACATGTTCTaGAACAAGAACTGTAAGGTTCCCATGGTCCCCATT +
Preference number: 6 (lower is better)
Translates to: AWLHFRFRLHMF*NKNCKVPMVPI
Trigger: AATGGGGACCATGGGAACCTTACAGTTCTTGTTCAAGAACATGTGGAGGCGGAATCGAAAGTGCAACCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000553158.5
CDS CAA 72 bp TCTATCAAGAGCATCACGACAGCTTACATAGCGGGCTaGAGTACCTCTTCCACAAGATACGGAGCATGGGGT +
Preference number: 6 (lower is better)
Translates to: SIKSITTAYIAG*STSSTRYGAWG
Trigger: ACCCCATGCTCCGTATCTTGTGGAAGAGGTACTCAAGCCCGCTATGTAAGCTGTCGTGATGCTCTTGATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000553158.5
CDS CAA 90 bp CACTCGCTCCATTCACTAGCAGCCCAACTGGGACAGGAAAATTCATaGCAATTCTCTCTCGTCACTCGGGACAGTTCTTGGCATTCATTG +
Preference number: 6 (lower is better)
Translates to: HSLHSLAAQLGQENS*QFSLVTRDSSWHSL
Trigger: CAATGAATGCCAAGAACTGTCCCGAGTGACGAGAGAGAATTGCAATGAATTTTCCTGTCCCAGTTGGGCTGCTAGTGAATGGAGCGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000549670.5
ENST00000553158.5
CDS CAA 90 bp ATCTGCTATTCTATCAAGAGCATCACGACAGCTTACATAGCGGGCTaGAGTACCTCTTCCACAAGATACGGAGCATGGGGTCCAAGAACC +
Preference number: 6 (lower is better)
Translates to: ICYSIKSITTAYIAG*STSSTRYGAWGPRT
Trigger: GGTTCTTGGACCCCATGCTCCGTATCTTGTGGAAGAGGTACTCAAGCCCGCTATGTAAGCTGTCGTGATGCTCTTGATAGAATAGCAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000553158.5
CDS CAA 90 bp ATCTGCTATTCTATCAAGAGCATCACGACAGCTTACATAGCGGGCTaGAGTACCTCTTCCACAAGATACGGAGCACTGTCTGTCACTGGG +
Preference number: 6 (lower is better)
Translates to: ICYSIKSITTAYIAG*STSSTRYGALSVTG
Trigger: CCCAGTGACAGACAGTGCTCCGTATCTTGTGGAAGAGGTACTCAAGCCCGCTATGTAAGCTGTCGTGATGCTCTTGATAGAATAGCAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS TCA 72 bp TTTAAGATCCTCCGATGTCCATGGTTCCTGATGCCATaGCACATCAGCAGGGCAAGCATGCATATGACACTG +
Preference number: 6 (lower is better)
Translates to: FKILRCPWFLMP*HISRASMHMTL
Trigger: CAGTGTCATATGCATGCTTGCCCTGCTGATGTGTCATGGCATCAGGAACCATGGACATCGGAGGATCTTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395541.3
ENST00000549670.5
ENST00000553158.5
CDS CAA 72 bp TCTATCAAGAGCATCACGACAGCTTACATAGCGGGCTaGAGTACCTCTTCCACAAGATACGGAGCACTGTCT +
Preference number: 6 (lower is better)
Translates to: SIKSITTAYIAG*STSSTRYGALS
Trigger: AGACAGTGCTCCGTATCTTGTGGAAGAGGTACTCAAGCCCGCTATGTAAGCTGTCGTGATGCTCTTGATAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549670.5
CDS CAA 90 bp GATTACAGCGCCTGGTTGCACTTTCGATTCCGCCTCCACATGTTCTaGAACAAGAACTGTAAGGTTCCCATGGTCCCCATTCACCATTTA +
Preference number: 6 (lower is better)
Translates to: DYSAWLHFRFRLHMF*NKNCKVPMVPIHHL
Trigger: TAAATGGTGAATGGGGACCATGGGAACCTTACAGTTCTTGTTCAAGAACATGTGGAGGCGGAATCGAAAGTGCAACCAGGCGCTGTAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000553158.5
CDS CAA 90 bp AGTAATTTCCTCCGTTTCTTGGCTCAGGACGATTACAGCGCCTGGTaGCACTTTCGATTCCGCCTCCACATGTTCTTGAACAAGAACTGT +
Preference number: 6 (lower is better)
Translates to: SNFLRFLAQDDYSAW*HFRFRLHMFLNKNC
Trigger: ACAGTTCTTGTTCAAGAACATGTGGAGGCGGAATCGAAAGTGCAACCAGGCGCTGTAATCGTCCTGAGCCAAGAAACGGAGGAAATTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000553158.5
CDS TCA 72 bp CTAGCTAGCTCATTGACACATTTAACATCTCGCATCTaGTACCCATGTCCACATGTGGTTGTGCAAGGACCC +
Preference number: 6 (lower is better)
Translates to: LASSLTHLTSRI*YPCPHVVVQGP
Trigger: GGGTCCTTGCACAACCACATGTGGACATGGGTATCAGATGCGAGATGTTAAATGTGTCAATGAGCTAGCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000549670.5
ENST00000553158.5
CDS GCA 72 bp CACATTTGTGACCCAGGACCAAACGCAAGCTCACACTaGTTGTTTCCATCATATCGTGATCCAGGAAGTTCT +
Preference number: 6 (lower is better)
Translates to: HICDPGPNASSH*LFPSYRDPGSS
Trigger: AGAACTTCCTGGATCACGATATGATGGAAACAAGCAGTGTGAGCTTGCGTTTGGTCCTGGGTCACAAATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000553158.5
CDS CAA 72 bp TTGGTAAACCTGAGAGGAAGGCACCACAGGGCATTCTaGATAAACTATAGGCCGAAGTCGATGGAGCTTATG +
Preference number: 6 (lower is better)
Translates to: LVNLRGRHHRAF*INYRPKSMELM
Trigger: CATAAGCTCCATCGACTTCGGCCTATAGTTTATCAAGAATGCCCTGTGGTGCCTTCCTCTCAGGTTTACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS CAA 90 bp TCTCATCAATTGGCTGATGGTAGTTCATGCATAAAACTTGTCGAGTaGTTTTTCCATGGCCACAGGAAGCTGAACAGGGTGACCAATCCC +
Preference number: 6 (lower is better)
Translates to: SHQLADGSSCIKLVE*FFHGHRKLNRVTNP
Trigger: GGGATTGGTCACCCTGTTCAGCTTCCTGTGGCCATGGAAAAACAACTCGACAAGTTTTATGCATGAACTACCATCAGCCAATTGATGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000549670.5
ENST00000553158.5
CDS TCA 72 bp AATTTCACTTTAAGATCCTCCGATGTCCATGGTTCCTaGTGCCATGACACATCAGCAGGGCAAGCATGCATA +
Preference number: 6 (lower is better)
Translates to: NFTLRSSDVHGS*CHDTSAGQACI
Trigger: TATGCATGCTTGCCCTGCTGATGTGTCATGGCATCAGGAACCATGGACATCGGAGGATCTTAAAGTGAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395541.3
ENST00000549670.5
ENST00000553158.5
CDS CCA 72 bp TTTACAACGATCCTTTGTGCCAATGCCACTGTATCTTaGAAGCCACCTCACATTAGAGGGAATGCCACTGAT +
Preference number: 6 (lower is better)
Translates to: FTTILCANATVS*KPPHIRGNATD
Trigger: ATCAGTGGCATTCCCTCTAATGTGAGGTGGCTTCCAAGATACAGTGGCATTGGCACAAAGGATCGTTGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000553158.5
CDS CCA 72 bp TCATTGCAATTCTCTCTCGTCACTCGGGACAGTTCTTaGCATTCATTGTCAGCAAGACGATGGCCAAAGTTA +
Preference number: 6 (lower is better)
Translates to: SLQFSLVTRDSS*HSLSARRWPKL
Trigger: TAACTTTGGCCATCGTCTTGCTGACAATGAATGCCAAGAACTGTCCCGAGTGACGAGAGAGAATTGCAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000549670.5
ENST00000553158.5
CDS CAA 72 bp TTCATTGCAATTCTCTCTCGTCACTCGGGACAGTTCTaGGCATTCATTGTCAGCAAGACGATGGCCAAAGTT +
Preference number: 6 (lower is better)
Translates to: FIAILSRHSGQF*AFIVSKTMAKV
Trigger: AACTTTGGCCATCGTCTTGCTGACAATGAATGCCAAGAACTGTCCCGAGTGACGAGAGAGAATTGCAATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000549670.5
ENST00000553158.5
CDS CAA 72 bp TTGGCTGATGGTAGTTCATGCATAAAACTTGTCGAGTaGTTTTTCCATGGCCACAGGAAGCTGAACAGGGTG +
Preference number: 6 (lower is better)
Translates to: LADGSSCIKLVE*FFHGHRKLNRV
Trigger: CACCCTGTTCAGCTTCCTGTGGCCATGGAAAAACAACTCGACAAGTTTTATGCATGAACTACCATCAGCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000549670.5
ENST00000553158.5
CDS CAA 90 bp TTGGGTAGGAGGTTTAAGCTGGTCACCACAGTAGTGGTCATCAACTaGAACAGTCTGTCCTTCATGAATGGAATACTTCATGCAATGGAT +
Preference number: 6 (lower is better)
Translates to: LGRRFKLVTTVVVIN*NSLSFMNGILHAMD
Trigger: ATCCATTGCATGAAGTATTCCATTCATGAAGGACAGACTGTTCAAGTTGATGACCACTACTGTGGTGACCAGCTTAAACCTCCTACCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000549670.5
ENST00000553158.5
CDS CAA 90 bp GTTAATGCATTGGTAAACCTGAGAGGAAGGCACCACAGGGCATTCTaGATAAACTATAGGCCGAAGTCGATGGAGCTTATGTTTCTTAGT +
Preference number: 6 (lower is better)
Translates to: VNALVNLRGRHHRAF*INYRPKSMELMFLS
Trigger: ACTAAGAAACATAAGCTCCATCGACTTCGGCCTATAGTTTATCAAGAATGCCCTGTGGTGCCTTCCTCTCAGGTTTACCAATGCATTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS TCA 72 bp CCACATTTGTCTATCTTGGCACTGGAGTTTAACACGTaGTCACAACCAGCTGCCTTCAAGACACAATTACAA +
Preference number: 6 (lower is better)
Translates to: PHLSILALEFNT*SQPAAFKTQLQ
Trigger: TTGTAATTGTGTCTTGAAGGCAGCTGGTTGTGATCACGTGTTAAACTCCAGTGCCAAGATAGACAAATGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395541.3
CDS GCA 72 bp GACATGAATCAGTATTACATGATCGAAATTTCATCCTaGGGCCCACACAGTAATTTCCTCCGTTTCTTGGCT +
Preference number: 6 (lower is better)
Translates to: DMNQYYMIEISS*GPHSNFLRFLA
Trigger: AGCCAAGAAACGGAGGAAATTACTGTGTGGGCCGCAGGATGAAATTTCGATCATGTAATACTGATTCATGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000553158.5
CDS CCA 72 bp AGGCCGAAGTCGATGGAGCTTATGTTTCTTAGTAGATaGGATCTCGGTGCAATATGTAATCCTTTGTCTGTA +
Preference number: 6 (lower is better)
Translates to: RPKSMELMFLSR*DLGAICNPLSV
Trigger: TACAGACAAAGGATTACATATTGCACCGAGATCCCATCTACTAAGAAACATAAGCTCCATCGACTTCGGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS CAA 90 bp ACAGGAAAATTCATTGCAATTCTCTCTCGTCACTCGGGACAGTTCTaGGCATTCATTGTCAGCAAGACGATGGCCAAAGTTATTCATACA +
Preference number: 6 (lower is better)
Translates to: TGKFIAILSRHSGQF*AFIVSKTMAKVIHT
Trigger: TGTATGAATAACTTTGGCCATCGTCTTGCTGACAATGAATGCCAAGAACTGTCCCGAGTGACGAGAGAGAATTGCAATGAATTTTCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000549670.5
ENST00000553158.5
CDS TCA 72 bp ACATGCCACCTTAGTTCACAGTCTGTATTGCAACTTTaGGTAACAAATGATGGAAGTGGCAAGTGGTCACAT +
Preference number: 6 (lower is better)
Translates to: TCHLSSQSVLQL*VTNDGSGKWSH
Trigger: ATGTGACCACTTGCCACTTCCATCATTTGTTACTCAAAGTTGCAATACAGACTGTGAACTAAGGTGGCATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000549670.5
ENST00000553158.5
CDS GCA 72 bp TCCAGAATAGCTGTACTGACGAATGTCAACGTTTGTTaGTCCTGCGGGAATCTTTACAACAACATTATAACC +
Preference number: 6 (lower is better)
Translates to: SRIAVLTNVNVC*SCGNLYNNIIT
Trigger: GGTTATAATGTTGTTGTAAAGATTCCCGCAGGAGCAACAAACGTTGACATTCGTCAGTACAGCTATTCTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000553158.5
CDS CAA 72 bp GTCCAGAATAGCTGTACTGACGAATGTCAACGTTTGTaGCTCCTGCGGGAATCTTTACAACAACATTATAAC +
Preference number: 6 (lower is better)
Translates to: VQNSCTDECQRL*LLRESLQQHYN
Trigger: GTTATAATGTTGTTGTAAAGATTCCCGCAGGAGCAACAAACGTTGACATTCGTCAGTACAGCTATTCTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000553158.5
CDS CAA 72 bp GTTGTCCAGAATAGCTGTACTGACGAATGTCAACGTTaGTTGCTCCTGCGGGAATCTTTACAACAACATTAT +
Preference number: 6 (lower is better)
Translates to: VVQNSCTDECQR*LLLRESLQQHY
Trigger: ATAATGTTGTTGTAAAGATTCCCGCAGGAGCAACAAACGTTGACATTCGTCAGTACAGCTATTCTGGACAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000553158.5
CDS CAA 72 bp AGGTTTAAGCTGGTCACCACAGTAGTGGTCATCAACTaGAACAGTCTGTCCTTCATGAATGGAATACTTCAT +
Preference number: 6 (lower is better)
Translates to: RFKLVTTVVVIN*NSLSFMNGILH
Trigger: ATGAAGTATTCCATTCATGAAGGACAGACTGTTCAAGTTGATGACCACTACTGTGGTGACCAGCTTAAACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000549670.5
ENST00000553158.5
CDS CAA 72 bp AAGGGCGAACTTCAGGATCACAGTAATTCTCATCAATaGGCTGATGGTAGTTCATGCATAAAACTTGTCGAG +
Preference number: 6 (lower is better)
Translates to: KGELQDHSNSHQ*ADGSSCIKLVE
Trigger: CTCGACAAGTTTTATGCATGAACTACCATCAGCCAATTGATGAGAATTACTGTGATCCTGAAGTTCGCCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000549670.5
ENST00000553158.5
CDS CAA 90 bp CATCTGGTTGTCCAGAATAGCTGTACTGACGAATGTCAACGTTTGTaGCTCCTGCGGGAATCTTTACAACAACATTATAACCATAATGAG +
Preference number: 6 (lower is better)
Translates to: HLVVQNSCTDECQRL*LLRESLQQHYNHNE
Trigger: CTCATTATGGTTATAATGTTGTTGTAAAGATTCCCGCAGGAGCAACAAACGTTGACATTCGTCAGTACAGCTATTCTGGACAACCAGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000553158.5
CDS CAA 90 bp TGTCATCTGGTTGTCCAGAATAGCTGTACTGACGAATGTCAACGTTaGTTGCTCCTGCGGGAATCTTTACAACAACATTATAACCATAAT +
Preference number: 6 (lower is better)
Translates to: CHLVVQNSCTDECQR*LLLRESLQQHYNHN
Trigger: ATTATGGTTATAATGTTGTTGTAAAGATTCCCGCAGGAGCAACAAACGTTGACATTCGTCAGTACAGCTATTCTGGACAACCAGATGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000553158.5
CDS CAA 90 bp GTTCCATCAAAGGGCGAACTTCAGGATCACAGTAATTCTCATCAATaGGCTGATGGTAGTTCATGCATAAAACTTGTCGAGTTGTTTTTC +
Preference number: 6 (lower is better)
Translates to: VPSKGELQDHSNSHQ*ADGSSCIKLVELFF
Trigger: GAAAAACAACTCGACAAGTTTTATGCATGAACTACCATCAGCCAATTGATGAGAATTACTGTGATCCTGAAGTTCGCCCTTTGATGGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000549670.5
ENST00000553158.5
CDS GCA 72 bp CTGATGTCCAAATGTTTACCATTAAAATCAGAGCACTaGTTCTCTCGAAAGTCTTGTGTGCCTTTTGGACAT +
Preference number: 6 (lower is better)
Translates to: LMSKCLPLKSEH*FSRKSCVPFGH
Trigger: ATGTCCAAAAGGCACACAAGACTTTCGAGAGAAGCAGTGCTCTGATTTTAATGGTAAACATTTGGACATCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000553158.5
CDS GCA 72 bp CACAGTAATTCTCATCAATTGGCTGATGGTAGTTCATaGATAAAACTTGTCGAGTTGTTTTTCCATGGCCAC +
Preference number: 6 (lower is better)
Translates to: HSNSHQLADGSS*IKLVELFFHGH
Trigger: GTGGCCATGGAAAAACAACTCGACAAGTTTTATGCATGAACTACCATCAGCCAATTGATGAGAATTACTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000549670.5
ENST00000553158.5
CDS CCA 72 bp AGTGGTCATCAACTTGAACAGTCTGTCCTTCATGAATaGAATACTTCATGCAATGGATGTCCAAGGTTCTAT +
Preference number: 6 (lower is better)
Translates to: SGHQLEQSVLHE*NTSCNGCPRFY
Trigger: ATAGAACCTTGGACATCCATTGCATGAAGTATTCCATTCATGAAGGACAGACTGTTCAAGTTGATGACCACT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000549670.5
ENST00000553158.5
CDS CAA 72 bp CAGAGCACTGCTTCTCTCGAAAGTCTTGTGTGCCTTTaGGACATGAATCAGTATTACATGATCGAAATTTCA +
Preference number: 6 (lower is better)
Translates to: QSTASLESLVCL*DMNQYYMIEIS
Trigger: TGAAATTTCGATCATGTAATACTGATTCATGTCCAAAAGGCACACAAGACTTTCGAGAGAAGCAGTGCTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000553158.5
CDS CAA 72 bp CTTAGTAGATGGGATCTCGGTGCAATATGTAATCCTTaGTCTGTAACTAAATCCACAGTTGTTTGCACACTG +
Preference number: 6 (lower is better)
Translates to: LSRWDLGAICNP*SVTKSTVVCTL
Trigger: CAGTGTGCAAACAACTGTGGATTTAGTTACAGACAAAGGATTACATATTGCACCGAGATCCCATCTACTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS TCA 72 bp ACTTTCATTTCTTTACATCTAGGATTATCATCATGTTaGACACCAAGTGTGTGCCCAAGCTCATGGGCTATA +
Preference number: 6 (lower is better)
Translates to: TFISLHLGLSSC*TPSVCPSSWAI
Trigger: TATAGCCCATGAGCTTGGGCACACACTTGGTGTTCAACATGATGATAATCCTAGATGTAAAGAAATGAAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000553158.5
CDS TCA 72 bp TACTTCATGCAATGGATGTCCAAGGTTCTATATCCTTaGCCACATTGGGATGAACATTCACTTTTGCCAATA +
Preference number: 6 (lower is better)
Translates to: YFMQWMSKVLYP*PHWDEHSLLPI
Trigger: TATTGGCAAAAGTGAATGTTCATCCCAATGTGGTCAAGGATATAGAACCTTGGACATCCATTGCATGAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000549670.5
ENST00000553158.5
CDS GCA 72 bp ATAGCTGTACTGACGAATGTCAACGTTTGTTGCTCCTaGGGGAATCTTTACAACAACATTATAACCATAATG +
Preference number: 6 (lower is better)
Translates to: IAVLTNVNVCCS*GNLYNNIITIM
Trigger: CATTATGGTTATAATGTTGTTGTAAAGATTCCCGCAGGAGCAACAAACGTTGACATTCGTCAGTACAGCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000553158.5
CDS CCA 72 bp ATGTATGAAGTTCACATGGACTCAGAGATTCAGGTTTaGTACTTGAATTACAGAAGCCATCACTCAAGTGAT +
Preference number: 6 (lower is better)
Translates to: MYEVHMDSEIQV*YLNYRSHHSSD
Trigger: ATCACTTGAGTGATGGCTTCTGTAATTCAAGTACCAAACCTGAATCTCTGAGTCCATGTGAACTTCATACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000549670.5
ENST00000553158.5
CDS CAA 72 bp AACTTTCATTTCTTTACATCTAGGATTATCATCATGTaGAACACCAAGTGTGTGCCCAAGCTCATGGGCTAT +
Preference number: 6 (lower is better)
Translates to: NFHFFTSRIIIM*NTKCVPKLMGY
Trigger: ATAGCCCATGAGCTTGGGCACACACTTGGTGTTCAACATGATGATAATCCTAGATGTAAAGAAATGAAAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000553158.5
CDS CAA 72 bp CTTTGTGAGTTGGAGGTTTCTGTACTTGACTGCAATTaGTGTCTTCTAATTTCCTTTGGAATTGGTCAATGC +
Preference number: 6 (lower is better)
Translates to: LCELEVSVLDCN*CLLISFGIGQC
Trigger: GCATTGACCAATTCCAAAGGAAATTAGAAGACACAAATTGCAGTCAAGTACAGAAACCTCCAACTCACAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS CAA 90 bp ATCTACAGGCTTTGTGAGTTGGAGGTTTCTGTACTTGACTGCAATTaGTGTCTTCTAATTTCCTTTGGAATTGGTCAATGCAAAACACTT +
Preference number: 6 (lower is better)
Translates to: IYRLCELEVSVLDCN*CLLISFGIGQCKTL
Trigger: AAGTGTTTTGCATTGACCAATTCCAAAGGAAATTAGAAGACACAAATTGCAGTCAAGTACAGAAACCTCCAACTCACAAAGCCTGTAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS GCA 72 bp CTTTATCAGACACAACACTATGATCACTCTTATGTATaGAAGTTATGTTTCTTCGCTGAAGACCTTGACACA +
Preference number: 6 (lower is better)
Translates to: LYQTQHYDHSYV*KLCFFAEDLDT
Trigger: TGTGTCAAGGTCTTCAGCGAAGAAACATAACTTGCATACATAAGAGTGATCATAGTGTTGTGTCTGATAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000549670.5
ENST00000553158.5
CDS CCA 72 bp CTTCATTCATGTTGCTGTAGGTATGAAAGGGTAAACTaGTTTCCTTTATTTGACTTTCTGACACACTGCAAT +
Preference number: 6 (lower is better)
Translates to: LHSCCCRYERVN*FPLFDFLTHCN
Trigger: ATTGCAGTGTGTCAGAAAGTCAAATAAAGGAAACCAGTTTACCCTTTCATACCTACAGCAACATGAATGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000553158.5
CDS CAA 90 bp CCTGGTTTTAAATGGTTTAAACATAAGTCACTGGACAAACCATGTTaGGTAATGCATTTCACTTGTCTCTTCATTATCCCAATTCCACAA +
Preference number: 6 (lower is better)
Translates to: PGFKWFKHKSLDKPC*VMHFTCLFIIPIPQ
Trigger: TTGTGGAATTGGGATAATGAAGAGACAAGTGAAATGCATTACCAAACATGGTTTGTCCAGTGACTTATGTTTAAACCATTTAAAACCAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389420.8
CDS GCA 72 bp GATAAGAAATATGTTTCAATTGTCTCTGGATCACAGTaGCTAGGATATAGTAGATGGTCAGTAACGACATTT +
Preference number: 6 (lower is better)
Translates to: DKKYVSIVSGSQ*LGYSRWSVTTF
Trigger: AAATGTCGTTACTGACCATCTACTATATCCTAGGCACTGTGATCCAGAGACAATTGAAACATATTTCTTATC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395541.3
ENST00000549670.5
ENST00000553158.5
CDS CCA 72 bp CATCTTCAACCATATCCTTCAATAGGTAGAAATAATTaGTTCCAGCAACCTGACAATAGAGTTTACAACGAT +
Preference number: 6 (lower is better)
Translates to: HLQPYPSIGRNN*FQQPDNRVYND
Trigger: ATCGTTGTAAACTCTATTGTCAGGTTGCTGGAACCAATTATTTCTACCTATTGAAGGATATGGTTGAAGATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389420.8
ENST00000395541.3
ENST00000553158.5
CDS CAA 72 bp AAATGGTTTAAACATAAGTCACTGGACAAACCATGTTaGGTAATGCATTTCACTTGTCTCTTCATTATCCCA +
Preference number: 6 (lower is better)
Translates to: KWFKHKSLDKPC*VMHFTCLFIIP
Trigger: TGGGATAATGAAGAGACAAGTGAAATGCATTACCAAACATGGTTTGTCCAGTGACTTATGTTTAAACCATTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389420.8