RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADAMTS19 (Homo sapiens)

Ensembl gene IDs: ENSG00000145808

Ensembl transcript IDs: ENST00000274487.9, ENST00000502709.1, ENST00000505791.5, ENST00000509467.1

Found 267 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGTGACCTTTTCCTCCATGGACCTTTTCTGCCTATATACACGGTGTaGGTGACCTGTTATGGCCATTGTATCATTGAGTGGCTCAATAAA +
Preference number: 1 (lower is better)
Translates to: CDLFLHGPFLPIYTV*VTCYGHCIIEWLNK
Trigger: TTTATTGAGCCACTCAATGATACAATGGCCATAACAGGTCACCCACACCGTGTATATAGGCAGAAAAGGTCCATGGAGGAAAAGGTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505791.5
3UTR TCA 90 bp ACCTTTTCCTCCATGGACCTTTTCTGCCTATATACACGGTGTGGGTaGCCTGTTATGGCCATTGTATCATTGAGTGGCTCAATAAATATG +
Preference number: 1 (lower is better)
Translates to: TFSSMDLFCLYTRCG*PVMAIVSLSGSINM
Trigger: CATATTTATTGAGCCACTCAATGATACAATGGCCATAACAGGTCACCCACACCGTGTATATAGGCAGAAAAGGTCCATGGAGGAAAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505791.5
3UTR GCA 90 bp GGAGTTTCATGGAGCAGAATAAGCTTTATCACACGAAGATTGACCTaGACACTCAGACTCTTGTGTTGGAAAAGGTTAAATACACATGTC +
Preference number: 1 (lower is better)
Translates to: GVSWSRISFITRRLT*TLRLLCWKRLNTHV
Trigger: GACATGTGTATTTAACCTTTTCCAACACAAGAGTCTGAGTGTGCAGGTCAATCTTCGTGTGATAAAGCTTATTCTGCTCCATGAAACTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502709.1
ENST00000505791.5
3UTR CCA 90 bp ATTATGCTAAGTCAGTATACATTCTGGATAATTCAATGTTATTGGTaGGGAGAGAGTAGCACCTTAGAGATAGCCCTAACAAACAACGAA +
Preference number: 1 (lower is better)
Translates to: IMLSQYTFWIIQCYW*GESSTLEIALTNNE
Trigger: TTCGTTGTTTGTTAGGGCTATCTCTAAGGTGCTACTCTCTCCCCACCAATAACATTGAATTATCCAGAATGTATACTGACTTAGCATAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
3UTR CCA 90 bp ACTATTATGCTAAGTCAGTATACATTCTGGATAATTCAATGTTATTaGTGGGGAGAGAGTAGCACCTTAGAGATAGCCCTAACAAACAAC +
Preference number: 1 (lower is better)
Translates to: TIMLSQYTFWIIQCY*WGESSTLEIALTNN
Trigger: GTTGTTTGTTAGGGCTATCTCTAAGGTGCTACTCTCTCCCCACCAATAACATTGAATTATCCAGAATGTATACTGACTTAGCATAATAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274487.9
3UTR-3UTR TCA 90 bp TTCTCTAAAAACCTGTTCAACAGCATGAGGTTCATTATGTTTACACATCTCCTGAATTGCCAAGAGCTGTaGTCCAGCCAGCCTGCTAGA +
Preference number: 2 (lower is better)
Translates to: FSKNLFNSMRFIMFTHLLNCQEL*SSQPAR
Trigger: TCTAGCAGGCTGGCTGGATCACAGCTCTTGGCAATT...CAGGAGATGTGTAAACATAATGAACCTCATGCTGTTGAACAGGTTTTTAGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274487.9
3UTR-3UTR GCA 90 bp AATAAGCTTTATCACACGAAGATTGACCTGCACACTCAGACTCTTGTGTTGGAATCCATGGACCTTTTCTaGCTATATACACGGTGTGGG +
Preference number: 2 (lower is better)
Translates to: NKLYHTKIDLHTQTLVLESMDLF*LYTRCG
Trigger: CCCACACCGTGTATATAGGCAGAAAAGGTCCATGGA...TTCCAACACAAGAGTCTGAGTGTGCAGGTCAATCTTCGTGTGATAAAGCTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505791.5
3UTR CAA 90 bp TCTGGTGGAGTTTCATGGAGCAGAATAAGCTTTATCACACGAAGATaGACCTGCACACTCAGACTCTTGTGTTGGAAAAGGTTAAATACA +
Preference number: 2 (lower is better)
Translates to: SGGVSWSRISFITRR*TCTLRLLCWKRLNT
Trigger: TGTATTTAACCTTTTCCAACACAAGAGTCTGAGTGTGCAGGTCAATCTTCGTGTGATAAAGCTTATTCTGCTCCATGAAACTCCACCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502709.1
3UTR-3UTR CCA 90 bp CAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATTGTGCAGGTGACAGAAAATaGGCTAATTCTGCAGCAGGA +
Preference number: 2 (lower is better)
Translates to: QYLCSSDMWICDKSMKNCAGDRK*ANSAAG
Trigger: TCCTGCTGCAGAATTAGCCCATTTTCTGTCACCTGC...ACAATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274487.9
3UTR-3UTR TCA 90 bp AGTAGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGACCTGTTCAACAGCATaGGGTTCATTATGTTTACAC +
Preference number: 2 (lower is better)
Translates to: SRQYLCSSDMWICDKSMKTCSTA*GSLCLH
Trigger: GTGTAAACATAATGAACCTCATGCTGTTGAACAGGT...CTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
3UTR-3UTR TCA 90 bp ACGAAGATTGACCTGCACACTCAGACTCTTGTGTTGGAAAAGGTTAAATACACAAGGTCTTCCTTTATCTaGAATGATACCACAGTAATG +
Preference number: 2 (lower is better)
Translates to: TKIDLHTQTLVLEKVKYTRSSFI*NDTTVM
Trigger: CATTACTGTGGTATCATTTCAGATAAAGGAAGACCT...TGTGTATTTAACCTTTTCCAACACAAGAGTCTGAGTGTGCAGGTCAATCTTCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505791.5
3UTR CAA 90 bp AGAATAAGCTTTATCACACGAAGATTGACCTGCACACTCAGACTCTaGTGTTGGAAAAGGTTAAATACACATGTCTTCCTTAGAGTTTTC +
Preference number: 2 (lower is better)
Translates to: RISFITRRLTCTLRL*CWKRLNTHVFLRVF
Trigger: GAAAACTCTAAGGAAGACATGTGTATTTAACCTTTTCCAACACAAGAGTCTGAGTGTGCAGGTCAATCTTCGTGTGATAAAGCTTATTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502709.1
ENST00000505791.5
3UTR-3UTR CCA 90 bp AGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATATTCAATGTTATTGGTaGGGAGAGAGTAGCACCTTA +
Preference number: 2 (lower is better)
Translates to: RQYLCSSDMWICDKSMKNIQCYW*GESSTL
Trigger: TAAGGTGCTACTCTCTCCCCACCAATAACATTGAAT...ATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
3UTR-3UTR CCA 90 bp AGTAGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGATACAGGGAAATGGGTaGATCAATGTTTTCTTTGTT +
Preference number: 2 (lower is better)
Translates to: SRQYLCSSDMWICDKSMKIQGNG*INVFFV
Trigger: AACAAAGAAAACATTGATCCACCCATTTCCCTGTAT...CTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274487.9
3UTR TCA 72 bp ACTGGCTCGTTGAGCCCCATTTCCCAAAGGGTGACATaGAGAGAGCCAGGTGACCTCAGAACATACATTGGA +
Preference number: 3 (lower is better)
Translates to: TGSLSPISQRVT*REPGDLRTYIG
Trigger: TCCAATGTATGTTCTGAGGTCACCTGGCTCTCTTCATGTCACCCTTTGGGAAATGGGGCTCAACGAGCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274487.9
3UTR CCA 72 bp CCTGGCTGCATCTGCTCCATGATAGGAAACCATTGCTaGGTCTGCAACCACTACAGTCTCTATGTTGTATTC +
Preference number: 3 (lower is better)
Translates to: PGCICSMIGNHC*VCNHYSLYVVF
Trigger: GAATACAACATAGAGACTGTAGTGGTTGCAGACCCAGCAATGGTTTCCTATCATGGAGCAGATGCAGCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505791.5
3UTR TCA 72 bp TCCATGGACCTTTTCTGCCTATATACACGGTGTGGGTaGCCTGTTATGGCCATTGTATCATTGAGTGGCTCA +
Preference number: 3 (lower is better)
Translates to: SMDLFCLYTRCG*PVMAIVSLSGS
Trigger: TGAGCCACTCAATGATACAATGGCCATAACAGGTCACCCACACCGTGTATATAGGCAGAAAAGGTCCATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505791.5
3UTR CCA 72 bp TTCCTCCATGGACCTTTTCTGCCTATATACACGGTGTaGGTGACCTGTTATGGCCATTGTATCATTGAGTGG +
Preference number: 3 (lower is better)
Translates to: FLHGPFLPIYTV*VTCYGHCIIEW
Trigger: CCACTCAATGATACAATGGCCATAACAGGTCACCCACACCGTGTATATAGGCAGAAAAGGTCCATGGAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505791.5
3UTR GCA 72 bp TGCATCTGCTCCATGATAGGAAACCATTGCTGGGTCTaGAACCACTACAGTCTCTATGTTGTATTCTTGAGG +
Preference number: 3 (lower is better)
Translates to: CICSMIGNHCWV*NHYSLYVVFLR
Trigger: CCTCAAGAATACAACATAGAGACTGTAGTGGTTGCAGACCCAGCAATGGTTTCCTATCATGGAGCAGATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505791.5
3UTR-3UTR CAA 90 bp GTTTCATGGAGCAGAATAAGCTTTATCACACGAAGATTGACCTGCACACTCAGAATGGCCATTGTATCATaGAGTGGCTCAATAAATATG +
Preference number: 3 (lower is better)
Translates to: VSWSRISFITRRLTCTLRMAIVS*SGSINM
Trigger: CATATTTATTGAGCCACTCAATGATACAATGGCCAT...TCTGAGTGTGCAGGTCAATCTTCGTGTGATAAAGCTTATTCTGCTCCATGAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505791.5
3UTR GCA 72 bp TGGAGCAGAATAAGCTTTATCACACGAAGATTGACCTaGACACTCAGACTCTTGTGTTGGAAAAGGTTAAAT +
Preference number: 3 (lower is better)
Translates to: WSRISFITRRLT*TLRLLCWKRLN
Trigger: ATTTAACCTTTTCCAACACAAGAGTCTGAGTGTGCAGGTCAATCTTCGTGTGATAAAGCTTATTCTGCTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502709.1
ENST00000505791.5
3UTR CCA 72 bp AGTCAGTATACATTCTGGATAATTCAATGTTATTGGTaGGGAGAGAGTAGCACCTTAGAGATAGCCCTAACA +
Preference number: 3 (lower is better)
Translates to: SQYTFWIIQCYW*GESSTLEIALT
Trigger: TGTTAGGGCTATCTCTAAGGTGCTACTCTCTCCCCACCAATAACATTGAATTATCCAGAATGTATACTGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
3UTR-3UTR CAA 90 bp TGCACACTCAGACTCTTGTGTTGGAAAAGGTTAAATACACATGTCTTCCTTAGAACTCAGACTCTTGTGTaGGAAAAGGTTAAATACACA +
Preference number: 3 (lower is better)
Translates to: CTLRLLCWKRLNTHVFLRTQTLV*EKVKYT
Trigger: TGTGTATTTAACCTTTTCCAACACAAGAGTCTGAGT...TCTAAGGAAGACATGTGTATTTAACCTTTTCCAACACAAGAGTCTGAGTGTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502709.1
ENST00000505791.5
CDS-3UTR GCA 90 bp GAATCTCCTGGCTGCATCTGCTCCATGATAGGAAACCATTGCTGGGTCTGCAACGGTTCTTCCCCATACTaGGCTCCCGCGGCCGCGGCT +
Preference number: 4 (lower is better)
Translates to: ESPGCICSMIGNHCWVCNGSSPY*APAAAA
Trigger: AGCCGCGGCCGCGGGAGCGCAGTATGGGGAAGAACC...GTTGCAGACCCAGCAATGGTTTCCTATCATGGAGCAGATGCAGCCAGGAGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505791.5
CDS-3UTR TCA 90 bp CTTCTCTGTGACCTTTTCCTCCATGGACCTTTTCTGCCTATATACACGGTGTGGCAGCAGCAGCAGATGTaGGTCAGGCGCATCTCGCGG +
Preference number: 4 (lower is better)
Translates to: LLCDLFLHGPFLPIYTVWQQQQM*VRRISR
Trigger: CCGCGAGATGCGCCTGACTCACATCTGCTGCTGCTG...CCACACCGTGTATATAGGCAGAAAAGGTCCATGGAGGAAAAGGTCACAGAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505791.5
CDS-3UTR TCA 90 bp AGTAGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGCCGGAGCCGGGACTCTaGTCGGCCCTCCACGGGCTC +
Preference number: 4 (lower is better)
Translates to: SRQYLCSSDMWICDKSMKPEPGL*SALHGL
Trigger: GAGCCCGTGGAGGGCCGATCAGAGTCCCGGCTCCGG...CTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR GCA 90 bp TTTATCACACGAAGATTGACCTGCACACTCAGACTCTTGTGTTGGAAAAGGTTAGCCAGCGAGCCAGGGTaGCGCAGCACAGCTCCGGTG +
Preference number: 4 (lower is better)
Translates to: FITRRLTCTLRLLCWKRLASEPG*RSTAPV
Trigger: CACCGGAGCTGTGCTGCGGCACCCTGGCTCGCTGGC...TAACCTTTTCCAACACAAGAGTCTGAGTGTGCAGGTCAATCTTCGTGTGATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502709.1
CDS-3UTR TCA 90 bp AGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATAGAGCGCACCTCGCGTaGGCTGCCGGCAGCCTGCGC +
Preference number: 4 (lower is better)
Translates to: RQYLCSSDMWICDKSMKNRAHLA*AAGSLR
Trigger: GCGCAGGCTGCCGGCAGCTCACGCGAGGTGCGCTCT...ATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CCA 90 bp CAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATTGTCGGATGCTGCCCCCGTaGGGCCGGGGCCGGGATTTG +
Preference number: 4 (lower is better)
Translates to: QYLCSSDMWICDKSMKNCRMLPP*GRGRDL
Trigger: CAAATCCCGGCCCCGGCCCCACGGGGGCAGCATCCG...ACAATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CCA 90 bp TTCTCTAAAAACCTGTTCAACAGCATGAGGTTCATTATGTTTACACATCTCCTGGCAGCCTGCGTCTGGTaGCGCGGGAGGTTGCGGGGC +
Preference number: 4 (lower is better)
Translates to: FSKNLFNSMRFIMFTHLLAACVW*RGRLRG
Trigger: GCCCCGCAACCTCCCGCGCCACCAGACGCAGGCTGC...CAGGAGATGTGTAAACATAATGAACCTCATGCTGTTGAACAGGTTTTTAGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR GCA 90 bp TTCTCTAAAAACCTGTTCAACAGCATGAGGTTCATTATGTTTACACATCTCCTGCCCCGCGGCAGCTCCTaGGACTCGAGCTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: FSKNLFNSMRFIMFTHLLPRGSS*DSSSSS
Trigger: GGACGAGGAGCTCGAGTCGCAGGAGCTGCCGCGGGG...CAGGAGATGTGTAAACATAATGAACCTCATGCTGTTGAACAGGTTTTTAGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR GCA 90 bp AGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATGCCAGCGAGCCAGGGTaGCGCAGCACAGCTCCGGTG +
Preference number: 4 (lower is better)
Translates to: RQYLCSSDMWICDKSMKNASEPG*RSTAPV
Trigger: CACCGGAGCTGTGCTGCGGCACCCTGGCTCGCTGGC...ATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CCA 90 bp CAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATTGTTGGCCCTCACAGCGCTaGGCAGAGGCGGGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: QYLCSSDMWICDKSMKNCWPSQR*AEAGLG
Trigger: GCCCAAGCCCGCCTCTGCCCAGCGCTGTGAGGGCCA...ACAATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR TCA 90 bp CCTGGCTGCATCTGCTCCATGATAGGAAACCATTGCTGGGTCTGCAACCACTACTTATCACACGAAGATTaGCCTGCACACTCAGACTCT +
Preference number: 4 (lower is better)
Translates to: PGCICSMIGNHCWVCNHYLSHED*PAHSDS
Trigger: AGAGTCTGAGTGTGCAGGTCAATCTTCGTGTGATAA...GTAGTGGTTGCAGACCCAGCAATGGTTTCCTATCATGGAGCAGATGCAGCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505791.5
CDS-3UTR GCA 90 bp CAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATTGTGGTTCTTCCCCATACTaGGCTCCCGCGGCCGCGGCT +
Preference number: 4 (lower is better)
Translates to: QYLCSSDMWICDKSMKNCGSSPY*APAAAA
Trigger: AGCCGCGGCCGCGGGAGCGCAGTATGGGGAAGAACC...ACAATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR GCA 90 bp AGTAGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGGGTGTAGAAGCAGCCTaGGTCTGGTGGCGCGGGAGG +
Preference number: 4 (lower is better)
Translates to: SRQYLCSSDMWICDKSMKGVEAA*VWWRGR
Trigger: CCTCCCGCGCCACCAGACGCAGGCTGCTTCTACACC...CTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CCA 90 bp TTCTCTAAAAACCTGTTCAACAGCATGAGGTTCATTATGTTTACACATCTCCTGGAAGCAGCCTGCGTCTaGTGGCGCGGGAGGTTGCGG +
Preference number: 4 (lower is better)
Translates to: FSKNLFNSMRFIMFTHLLEAACV*WRGRLR
Trigger: CCGCAACCTCCCGCGCCACCAGACGCAGGCTGCTTC...CAGGAGATGTGTAAACATAATGAACCTCATGCTGTTGAACAGGTTTTTAGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR GCA 90 bp AGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATTGGCCGCTGTTCCACTaGGAAGCGCGGCGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: RQYLCSSDMWICDKSMKNWPLFH*EARRQE
Trigger: TTCCTGGCGCCGCGCTTCGCAGTGGAACAGCGGCCA...ATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR GCA 90 bp AGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATCGGGCTTGGGCCCAATaGAGTCCCTCTCTCGGGCTC +
Preference number: 4 (lower is better)
Translates to: RQYLCSSDMWICDKSMKNRAWAQ*SPSLGL
Trigger: GAGCCCGAGAGAGGGACTGCATTGGGCCCAAGCCCG...ATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CCA 90 bp AGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATGCCGGGGCCGGGATTTaGCCGCTGTTCCACTGCGAA +
Preference number: 4 (lower is better)
Translates to: RQYLCSSDMWICDKSMKNAGAGI*PLFHCE
Trigger: TTCGCAGTGGAACAGCGGCCAAATCCCGGCCCCGGC...ATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CCA 90 bp CAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATTGTGGGCAGAGGCGGGCTTaGGCCCAATGCAGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: QYLCSSDMWICDKSMKNCGQRRA*AQCSPS
Trigger: AGAGGGACTGCATTGGGCCCAAGCCCGCCTCTGCCC...ACAATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
3UTR CAA 72 bp ATCTCCTGGCTGCATCTGCTCCATGATAGGAAACCATaGCTGGGTCTGCAACCACTACAGTCTCTATGTTGT +
Preference number: 4 (lower is better)
Translates to: ISWLHLLHDRKP*LGLQPLQSLCC
Trigger: ACAACATAGAGACTGTAGTGGTTGCAGACCCAGCAATGGTTTCCTATCATGGAGCAGATGCAGCCAGGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505791.5
CDS-3UTR TCA 90 bp TTCTCTAAAAACCTGTTCAACAGCATGAGGTTCATTATGTTTACACATCTCCTGCAGCAGCAGCAGATGTaGGTCAGGCGCATCTCGCGG +
Preference number: 4 (lower is better)
Translates to: FSKNLFNSMRFIMFTHLLQQQQM*VRRISR
Trigger: CCGCGAGATGCGCCTGACTCACATCTGCTGCTGCTG...CAGGAGATGTGTAAACATAATGAACCTCATGCTGTTGAACAGGTTTTTAGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR GCA 90 bp AGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATCCTCCCACACGGTCATaGAGTCCTGGCCCTCACAGC +
Preference number: 4 (lower is better)
Translates to: RQYLCSSDMWICDKSMKNPPTRS*SPGPHS
Trigger: GCTGTGAGGGCCAGGACTGCATGACCGTGTGGGAGG...ATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CCA 90 bp AGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATACGGTCATGCAGTCCTaGCCCTCACAGCGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: RQYLCSSDMWICDKSMKNTVMQS*PSQRWA
Trigger: TGCCCAGCGCTGTGAGGGCCAGGACTGCATGACCGT...ATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR TCA 90 bp AGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATCACCTCCACAGGTGCTaGAAGAAGCCAGCGAGCCAG +
Preference number: 4 (lower is better)
Translates to: RQYLCSSDMWICDKSMKNHLHRC*KKPASQ
Trigger: CTGGCTCGCTGGCTTCTTTCAGCACCTGTGGAGGTG...ATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR TCA 90 bp GACTTCTCTGTGACCTTTTCCTCCATGGACCTTTTCTGCCTATATACACGGTGTTATACACGGTGTGGGTaGCCTGTTATGGCCATTGTA +
Preference number: 4 (lower is better)
Translates to: DFSVTFSSMDLFCLYTRCYTRCG*PVMAIV
Trigger: TACAATGGCCATAACAGGTCACCCACACCGTGTATA...ACACCGTGTATATAGGCAGAAAAGGTCCATGGAGGAAAAGGTCACAGAGAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505791.5
CDS-3UTR TCA 90 bp TTCTCTAAAAACCTGTTCAACAGCATGAGGTTCATTATGTTTACACATCTCCTGTGCGCTCTCGACTGCTaGTCCCAGCACTGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: FSKNLFNSMRFIMFTHLLCALDC*SQHCRF
Trigger: GAACCTGCAGTGCTGGGATCAGCAGTCGAGAGCGCA...CAGGAGATGTGTAAACATAATGAACCTCATGCTGTTGAACAGGTTTTTAGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR GCA 90 bp TTCTCTAAAAACCTGTTCAACAGCATGAGGTTCATTATGTTTACACATCTCCTGCGGTCGGGGGCGAACTaGAGCTCTGAAACGATCCCA +
Preference number: 4 (lower is better)
Translates to: FSKNLFNSMRFIMFTHLLRSGAN*SSETIP
Trigger: TGGGATCGTTTCAGAGCTGCAGTTCGCCCCCGACCG...CAGGAGATGTGTAAACATAATGAACCTCATGCTGTTGAACAGGTTTTTAGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CCA 90 bp AGTAGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGCACTCGGCAGTACACTaGCCACTGATCTCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: SRQYLCSSDMWICDKSMKHSAVH*PLISQA
Trigger: TGCCTGGGAGATCAGTGGCCAGTGTACTGCCGAGTG...CTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR TCA 90 bp GACTTCTCTGTGACCTTTTCCTCCATGGACCTTTTCTGCCTATATACACGGTGTATGACTGTGAAGAGCTaGCTTCTCTGTGACCTTTTC +
Preference number: 4 (lower is better)
Translates to: DFSVTFSSMDLFCLYTRCMTVKS*LLCDLF
Trigger: GAAAAGGTCACAGAGAAGTCAGCTCTTCACAGTCAT...ACACCGTGTATATAGGCAGAAAAGGTCCATGGAGGAAAAGGTCACAGAGAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505791.5
CDS-3UTR TCA 90 bp TTCTCTAAAAACCTGTTCAACAGCATGAGGTTCATTATGTTTACACATCTCCTGCCTGTACTGGCTCGTTaGGCCCCATTTCCCAAAGGG +
Preference number: 4 (lower is better)
Translates to: FSKNLFNSMRFIMFTHLLPVLAR*APFPKG
Trigger: CCCTTTGGGAAATGGGGCTCAACGAGCCAGTACAGG...CAGGAGATGTGTAAACATAATGAACCTCATGCTGTTGAACAGGTTTTTAGAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR GCA 90 bp ATATACACGGTGTGGGTGACCTGTTATGGCCATTGTATCATTGAGTGGCTCAATTCTCCTGGCTGCATCTaGTCCATGATAGGAAACCAT +
Preference number: 4 (lower is better)
Translates to: IYTVWVTCYGHCIIEWLNSPGCI*SMIGNH
Trigger: ATGGTTTCCTATCATGGAGCAGATGCAGCCAGGAGA...ATTGAGCCACTCAATGATACAATGGCCATAACAGGTCACCCACACCGTGTATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505791.5
CDS-3UTR CCA 90 bp AGTAGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGCTCCTCCTCCACAAGTaGCATCGCAATCTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: SRQYLCSSDMWICDKSMKLLLHK*HRNLPS
Trigger: GCTGGGAAGATTGCGATGCCACTTGTGGAGGAGGAG...CTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR TCA 90 bp CAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATTGTGATCTCCCAGGCACTTaGAAGTCAGAGCAGCCAGTC +
Preference number: 4 (lower is better)
Translates to: QYLCSSDMWICDKSMKNCDLPGT*KSEQPV
Trigger: GACTGGCTGCTCTGACTTTCAAGTGCCTGGGAGATC...ACAATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR TCA 90 bp AGTAGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGCAGTACACTGGCCACTaGTCTCCCAGGCACTTGAAA +
Preference number: 4 (lower is better)
Translates to: SRQYLCSSDMWICDKSMKQYTGH*SPRHLK
Trigger: TTTCAAGTGCCTGGGAGATCAGTGGCCAGTGTACTG...CTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR TCA 90 bp AGTAGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATTGCCAAGAGCTGTaGTCCAGCCAGCCTGCTAGA +
Preference number: 4 (lower is better)
Translates to: SRQYLCSSDMWICDKSMKNCQEL*SSQPAR
Trigger: TCTAGCAGGCTGGCTGGATCACAGCTCTTGGCAATT...CTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR TCA 90 bp TTCTCTAAAAACCTGTTCAACAGCATGAGGTTCATTATGTTTACACATCTCCTGTCCCAAAGGGTGACATaGAGAGAGCCAGGTGACCTC +
Preference number: 4 (lower is better)
Translates to: FSKNLFNSMRFIMFTHLLSQRVT*REPGDL
Trigger: GAGGTCACCTGGCTCTCTTCATGTCACCCTTTGGGA...CAGGAGATGTGTAAACATAATGAACCTCATGCTGTTGAACAGGTTTTTAGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR GCA 90 bp CAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATTGTCAGGTGCTGAGGTCCTaGTGGTACATTCTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: QYLCSSDMWICDKSMKNCQVLRS*WYILQP
Trigger: AGGCTGGAGAATGTACCAGCAGGACCTCAGCACCTG...ACAATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR TCA 90 bp GTTTCATGGAGCAGAATAAGCTTTATCACACGAAGATTGACCTGCACACTCAGAATGACTGTGAAGAGCTaGCTTCTCTGTGACCTTTTC +
Preference number: 4 (lower is better)
Translates to: VSWSRISFITRRLTCTLRMTVKS*LLCDLF
Trigger: GAAAAGGTCACAGAGAAGTCAGCTCTTCACAGTCAT...TCTGAGTGTGCAGGTCAATCTTCGTGTGATAAAGCTTATTCTGCTCCATGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502709.1
ENST00000505791.5
CDS-3UTR TCA 90 bp CTTCTCTGTGACCTTTTCCTCCATGGACCTTTTCTGCCTATATACACGGTGTGGAGGTCTTCCTTTATCTaGAATGATACCACAGTAATG +
Preference number: 4 (lower is better)
Translates to: LLCDLFLHGPFLPIYTVWRSSFI*NDTTVM
Trigger: CATTACTGTGGTATCATTTCAGATAAAGGAAGACCT...CCACACCGTGTATATAGGCAGAAAAGGTCCATGGAGGAAAAGGTCACAGAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505791.5
CDS-3UTR TCA 90 bp CTTTATCACACGAAGATTGACCTGCACACTCAGACTCTTGTGTTGGAAAAGGTTTTATCACACGAAGATTaGCCTGCACACTCAGACTCT +
Preference number: 4 (lower is better)
Translates to: LYHTKIDLHTQTLVLEKVLSHED*PAHSDS
Trigger: AGAGTCTGAGTGTGCAGGTCAATCTTCGTGTGATAA...AACCTTTTCCAACACAAGAGTCTGAGTGTGCAGGTCAATCTTCGTGTGATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502709.1
ENST00000505791.5
CDS-3UTR TCA 90 bp CAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATTGTCAGATGTTCAGGTGCTaGGGTCCTGCTGGTACATTC +
Preference number: 4 (lower is better)
Translates to: QYLCSSDMWICDKSMKNCQMFRC*GPAGTF
Trigger: GAATGTACCAGCAGGACCTCAGCACCTGAACATCTG...ACAATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR TCA 90 bp TTCTCTAAAAACCTGTTCAACAGCATGAGGTTCATTATGTTTACACATCTCCTGGACATTGCCAGTCTCTaGATCCAGGCAAACCTGCAG +
Preference number: 4 (lower is better)
Translates to: FSKNLFNSMRFIMFTHLLDIASL*IQANLQ
Trigger: CTGCAGGTTTGCCTGGATTCAGAGACTGGCAATGTC...CAGGAGATGTGTAAACATAATGAACCTCATGCTGTTGAACAGGTTTTTAGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR TCA 90 bp TTCTCTAAAAACCTGTTCAACAGCATGAGGTTCATTATGTTTACACATCTCCTGCATCTAACGGTCCGATaGCGTATGCCTTTGCCACAC +
Preference number: 4 (lower is better)
Translates to: FSKNLFNSMRFIMFTHLLHLTVR*RMPLPH
Trigger: GTGTGGCAAAGGCATACGTCATCGGACCGTTAGATG...CAGGAGATGTGTAAACATAATGAACCTCATGCTGTTGAACAGGTTTTTAGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR TCA 90 bp CAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATTGTCCATTTCCCAAAGGGTaGCATGAAGAGAGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: QYLCSSDMWICDKSMKNCPFPKG*HEESQV
Trigger: CACCTGGCTCTCTTCATGTCACCCTTTGGGAAATGG...ACAATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR GCA 90 bp TATCACACGAAGATTGACCTGCACACTCAGACTCTTGTGTTGGAAAAGGTTAAATCCATGGACCTTTTCTaGCTATATACACGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: YHTKIDLHTQTLVLEKVKSMDLF*LYTRCG
Trigger: CCCACACCGTGTATATAGGCAGAAAAGGTCCATGGA...TTTAACCTTTTCCAACACAAGAGTCTGAGTGTGCAGGTCAATCTTCGTGTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502709.1
ENST00000505791.5
CDS-3UTR GCA 90 bp GTTTCATGGAGCAGAATAAGCTTTATCACACGAAGATTGACCTGCACACTCAGAATGATAGGAAACCATTaGTGGGTCTGCAACCACTAC +
Preference number: 4 (lower is better)
Translates to: VSWSRISFITRRLTCTLRMIGNH*WVCNHY
Trigger: GTAGTGGTTGCAGACCCAGCAATGGTTTCCTATCAT...TCTGAGTGTGCAGGTCAATCTTCGTGTGATAAAGCTTATTCTGCTCCATGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502709.1
ENST00000505791.5
CDS-3UTR GCA 90 bp CTTTATCACACGAAGATTGACCTGCACACTCAGACTCTTGTGTTGGAAAAGGTTATGATAGGAAACCATTaGTGGGTCTGCAACCACTAC +
Preference number: 4 (lower is better)
Translates to: LYHTKIDLHTQTLVLEKVMIGNH*WVCNHY
Trigger: GTAGTGGTTGCAGACCCAGCAATGGTTTCCTATCAT...AACCTTTTCCAACACAAGAGTCTGAGTGTGCAGGTCAATCTTCGTGTGATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502709.1
ENST00000505791.5
CDS-3UTR GCA 90 bp TTGACCTGCACACTCAGACTCTTGTGTTGGAAAAGGTTAAATACACATGTCTTCTCTCCTGGCTGCATCTaGTCCATGATAGGAAACCAT +
Preference number: 4 (lower is better)
Translates to: LTCTLRLLCWKRLNTHVFSPGCI*SMIGNH
Trigger: ATGGTTTCCTATCATGGAGCAGATGCAGCCAGGAGA...GAAGACATGTGTATTTAACCTTTTCCAACACAAGAGTCTGAGTGTGCAGGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502709.1
ENST00000505791.5
CDS-3UTR GCA 90 bp GTTTCATGGAGCAGAATAAGCTTTATCACACGAAGATTGACCTGCACACTCAGAAATGAATCTCCTGGCTaGATCTGCTCCATGATAGGA +
Preference number: 4 (lower is better)
Translates to: VSWSRISFITRRLTCTLRNESPG*ICSMIG
Trigger: TCCTATCATGGAGCAGATGCAGCCAGGAGATTCATT...TCTGAGTGTGCAGGTCAATCTTCGTGTGATAAAGCTTATTCTGCTCCATGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502709.1
ENST00000505791.5
CDS-3UTR CCA 90 bp GTTTCATGGAGCAGAATAAGCTTTATCACACGAAGATTGACCTGCACACTCAGAATAGGAAACCATTGCTaGGTCTGCAACCACTACAGT +
Preference number: 4 (lower is better)
Translates to: VSWSRISFITRRLTCTLRIGNHC*VCNHYS
Trigger: ACTGTAGTGGTTGCAGACCCAGCAATGGTTTCCTAT...TCTGAGTGTGCAGGTCAATCTTCGTGTGATAAAGCTTATTCTGCTCCATGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502709.1
ENST00000505791.5
CDS-3UTR CCA 90 bp GACCTGCACACTCAGACTCTTGTGTTGGAAAAGGTTAAATACACATGTCTTCCTATAGGAAACCATTGCTaGGTCTGCAACCACTACAGT +
Preference number: 4 (lower is better)
Translates to: DLHTQTLVLEKVKYTCLPIGNHC*VCNHYS
Trigger: ACTGTAGTGGTTGCAGACCCAGCAATGGTTTCCTAT...AGGAAGACATGTGTATTTAACCTTTTCCAACACAAGAGTCTGAGTGTGCAGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502709.1
ENST00000505791.5
3UTR CAA 72 bp GTTTCATGGAGCAGAATAAGCTTTATCACACGAAGATaGACCTGCACACTCAGACTCTTGTGTTGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: VSWSRISFITRR*TCTLRLLCWKR
Trigger: CCTTTTCCAACACAAGAGTCTGAGTGTGCAGGTCAATCTTCGTGTGATAAAGCTTATTCTGCTCCATGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502709.1
ENST00000505791.5
CDS-3UTR TCA 90 bp AGTAGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGTATACACGGTGTGGGTaGCCTGTTATGGCCATTGTA +
Preference number: 4 (lower is better)
Translates to: SRQYLCSSDMWICDKSMKYTRCG*PVMAIV
Trigger: TACAATGGCCATAACAGGTCACCCACACCGTGTATA...CTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR TCA 90 bp CAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATTGTAGGACAGCTTGCCACTaGAGTATATGCTTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: QYLCSSDMWICDKSMKNCRTACH*SICFGE
Trigger: CTCCCCAAAGCATATACTTCAGTGGCAAGCTGTCCT...ACAATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR TCA 90 bp TTCTCTAAAAACCTGTTCAACAGCATGAGGTTCATTATGTTTACACATCTCCTGTTTGCCACACTTGACTaGACACTCAGACCACACTCC +
Preference number: 4 (lower is better)
Translates to: FSKNLFNSMRFIMFTHLLFATLD*TLRPHS
Trigger: GGAGTGTGGTCTGAGTGTTCAGTCAAGTGTGGCAAA...CAGGAGATGTGTAAACATAATGAACCTCATGCTGTTGAACAGGTTTTTAGAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR TCA 90 bp TTCTCTAAAAACCTGTTCAACAGCATGAGGTTCATTATGTTTACACATCTCCTGTGCCTTTGCCACACTTaGCTGAACACTCAGACCACA +
Preference number: 4 (lower is better)
Translates to: FSKNLFNSMRFIMFTHLLCLCHT*LNTQTT
Trigger: TGTGGTCTGAGTGTTCAGTCAAGTGTGGCAAAGGCA...CAGGAGATGTGTAAACATAATGAACCTCATGCTGTTGAACAGGTTTTTAGAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR GCA 90 bp TTTATCACACGAAGATTGACCTGCACACTCAGACTCTTGTGTTGGAAAAGGTTAACACGAAGATTGACCTaGACACTCAGACTCTTGTGT +
Preference number: 4 (lower is better)
Translates to: FITRRLTCTLRLLCWKRLTRRLT*TLRLLC
Trigger: ACACAAGAGTCTGAGTGTGCAGGTCAATCTTCGTGT...TAACCTTTTCCAACACAAGAGTCTGAGTGTGCAGGTCAATCTTCGTGTGATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502709.1
ENST00000505791.5
CDS-3UTR GCA 90 bp CAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATTGTGAATCCAGGCAAACCTaGAGGACAAGGTGGATTCTC +
Preference number: 4 (lower is better)
Translates to: QYLCSSDMWICDKSMKNCESRQT*RTRWIL
Trigger: GAGAATCCACCTTGTCCTGCAGGTTTGCCTGGATTC...ACAATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR GCA 90 bp CAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATTGTGAAGAGGGGCTCAGGTaGTTTAGAGCTCTGGTTTTC +
Preference number: 4 (lower is better)
Translates to: QYLCSSDMWICDKSMKNCEEGLR*FRALVF
Trigger: GAAAACCAGAGCTCTAAAGCACCTGAGCCCCTCTTC...ACAATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CCA 90 bp CAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATTGTTCATCCCTGGCAGCTTaGAGGGAACCATCACAGAAT +
Preference number: 4 (lower is better)
Translates to: QYLCSSDMWICDKSMKNCSSLAA*REPSQN
Trigger: ATTCTGTGATGGTTCCCTCCAAGCTGCCAGGGATGA...ACAATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CCA 90 bp AGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATAGTGTATGTCATCCCTaGCAGCTTGGAGGGAACCAT +
Preference number: 4 (lower is better)
Translates to: RQYLCSSDMWICDKSMKNSVCHP*QLGGNH
Trigger: ATGGTTCCCTCCAAGCTGCCAGGGATGACATACACT...ATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CCA 90 bp CAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATTGTTCACAGCCAACTTTCTaGCACCTGCCATTTGCACAG +
Preference number: 4 (lower is better)
Translates to: QYLCSSDMWICDKSMKNCSQPTF*HLPFAQ
Trigger: CTGTGCAAATGGCAGGTGCCAGAAAGTTGGCTGTGA...ACAATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CCA 90 bp AGTAGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGGGTGCTTTAGAGCTCTaGTTTTCTGGAAGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: SRQYLCSSDMWICDKSMKGALEL*FSGRGS
Trigger: AGACCCTCTTCCAGAAAACCAGAGCTCTAAAGCACC...CTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CCA 90 bp AGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATGGGTTGAAGATGGCATaGCCTGTATGCTGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: RQYLCSSDMWICDKSMKNGLKMA*PVCCRF
Trigger: AAACCTGCAGCATACAGGCCATGCCATCTTCAACCC...ATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CCA 90 bp AGTAGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGGCAGGTGACAGAAAATaGGCTAATTCTGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: SRQYLCSSDMWICDKSMKAGDRK*ANSAAG
Trigger: TCCTGCTGCAGAATTAGCCCATTTTCTGTCACCTGC...CTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR TCA 90 bp ATATATAGTTCTGGTGGAGTTTCATGGAGCAGAATAAGCTTTATCACACGAAGATATACACGGTGTGGGTaGCCTGTTATGGCCATTGTA +
Preference number: 4 (lower is better)
Translates to: IYSSGGVSWSRISFITRRYTRCG*PVMAIV
Trigger: TACAATGGCCATAACAGGTCACCCACACCGTGTATA...TCTTCGTGTGATAAAGCTTATTCTGCTCCATGAAACTCCACCAGAACTATATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502709.1
CDS-3UTR TCA 90 bp AGTAGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGTCACCAGACATGATATaGAGACCATCAGCACACGAT +
Preference number: 4 (lower is better)
Translates to: SRQYLCSSDMWICDKSMKSPDMI*RPSAHD
Trigger: ATCGTGTGCTGATGGTCTTCATATCATGTCTGGTGA...CTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR TCA 90 bp CAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATTGTGCTACATCGAGACCATaGAACGTCACCAAGATTCTG +
Preference number: 4 (lower is better)
Translates to: QYLCSSDMWICDKSMKNCATSRP*NVTKIL
Trigger: CAGAATCTTGGTGACGTTTCATGGTCTCGATGTAGC...ACAATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR TCA 90 bp CAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATTGTACATGCTGCATCTCCTaGCAAAAAGAAGCCAATGGC +
Preference number: 4 (lower is better)
Translates to: QYLCSSDMWICDKSMKNCTCCIS*QKEANG
Trigger: GCCATTGGCTTCTTTTTGTCAGGAGATGCAGCATGT...ACAATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR TCA 90 bp AGTAGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGATCATCCACCTTGTTTaGCATGGTTGCTCATTGCAC +
Preference number: 4 (lower is better)
Translates to: SRQYLCSSDMWICDKSMKIIHLV*HGCSLH
Trigger: GTGCAATGAGCAACCATGTCAAACAAGGTGGATGAT...CTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR TCA 90 bp CAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATTGTTTTGCCACAGGTAATTaGGCACTTAGACCAGTCACC +
Preference number: 4 (lower is better)
Translates to: QYLCSSDMWICDKSMKNCFATGN*ALRPVT
Trigger: GGTGACTGGTCTAAGTGCTCAATTACCTGTGGCAAA...ACAATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR TCA 90 bp TTCTCTAAAAACCTGTTCAACAGCATGAGGTTCATTATGTTTACACATCTCCTGTTCTCATTGCAGGGTTaGAGATGGCATGGCCTGTAT +
Preference number: 4 (lower is better)
Translates to: FSKNLFNSMRFIMFTHLLFSLQG*RWHGLY
Trigger: ATACAGGCCATGCCATCTTCAACCCTGCAATGAGAA...CAGGAGATGTGTAAACATAATGAACCTCATGCTGTTGAACAGGTTTTTAGAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR GCA 90 bp CAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATTGTTCCATGGACCTTTTCTaGCTATATACACGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: QYLCSSDMWICDKSMKNCSMDLF*LYTRCG
Trigger: CCCACACCGTGTATATAGGCAGAAAAGGTCCATGGA...ACAATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR GCA 90 bp AGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATTCTCCTGGCTGCATCTaGTCCATGATAGGAAACCAT +
Preference number: 4 (lower is better)
Translates to: RQYLCSSDMWICDKSMKNSPGCI*SMIGNH
Trigger: ATGGTTTCCTATCATGGAGCAGATGCAGCCAGGAGA...ATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR GCA 90 bp TGCCCAATATATAGTTCTGGTGGAGTTTCATGGAGCAGAATAAGCTTTATCACAAATGAATCTCCTGGCTaGATCTGCTCCATGATAGGA +
Preference number: 4 (lower is better)
Translates to: CPIYSSGGVSWSRISFITNESPG*ICSMIG
Trigger: TCCTATCATGGAGCAGATGCAGCCAGGAGATTCATT...TGTGATAAAGCTTATTCTGCTCCATGAAACTCCACCAGAACTATATATTGGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502709.1
CDS-3UTR GCA 90 bp ATTGACCTGCACACTCAGACTCTTGTGTTGGAAAAGGTTAAATACACATGTCTTACACGAAGATTGACCTaGACACTCAGACTCTTGTGT +
Preference number: 4 (lower is better)
Translates to: IDLHTQTLVLEKVKYTCLTRRLT*TLRLLC
Trigger: ACACAAGAGTCTGAGTGTGCAGGTCAATCTTCGTGT...AAGACATGTGTATTTAACCTTTTCCAACACAAGAGTCTGAGTGTGCAGGTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502709.1
ENST00000505791.5
CDS-3UTR GCA 90 bp TTCTCTAAAAACCTGTTCAACAGCATGAGGTTCATTATGTTTACACATCTCCTGTGGATTACACGGGACTaGATTCCTTTGCCACAGGTA +
Preference number: 4 (lower is better)
Translates to: FSKNLFNSMRFIMFTHLLWITRD*IPLPQV
Trigger: TACCTGTGGCAAAGGAATGCAGTCCCGTGTAATCCA...CAGGAGATGTGTAAACATAATGAACCTCATGCTGTTGAACAGGTTTTTAGAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CCA 90 bp TTCTCTAAAAACCTGTTCAACAGCATGAGGTTCATTATGTTTACACATCTCCTGCCTATATACACGGTGTaGGTGACCTGTTATGGCCAT +
Preference number: 4 (lower is better)
Translates to: FSKNLFNSMRFIMFTHLLPIYTV*VTCYGH
Trigger: ATGGCCATAACAGGTCACCCACACCGTGTATATAGG...CAGGAGATGTGTAAACATAATGAACCTCATGCTGTTGAACAGGTTTTTAGAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CCA 90 bp AGAATAAGCTTTATCACACGAAGATTGACCTGCACACTCAGACTCTTGTGTTGGTCTGGTGGAGTTTCATaGAGCAGAATAAGCTTTATC +
Preference number: 4 (lower is better)
Translates to: RISFITRRLTCTLRLLCWSGGVS*SRISFI
Trigger: GATAAAGCTTATTCTGCTCCATGAAACTCCACCAGA...CCAACACAAGAGTCTGAGTGTGCAGGTCAATCTTCGTGTGATAAAGCTTATTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502709.1
CDS-3UTR CCA 90 bp CAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATTGTACCATCAGCACACGATaGGTGGTCATTGTCATGGTT +
Preference number: 4 (lower is better)
Translates to: QYLCSSDMWICDKSMKNCTISTR*VVIVMV
Trigger: AACCATGACAATGACCACCCATCGTGTGCTGATGGT...ACAATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CCA 90 bp TTCTCTAAAAACCTGTTCAACAGCATGAGGTTCATTATGTTTACACATCTCCTGGGCCCAAAAAGGATCTaGCATTGTTCATCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: FSKNLFNSMRFIMFTHLLGPKRI*HCSSAV
Trigger: CACTGCTGATGAACAATGCCAGATCCTTTTTGGGCC...CAGGAGATGTGTAAACATAATGAACCTCATGCTGTTGAACAGGTTTTTAGAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR TCA 90 bp AGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATATGACTGTGAAGAGCTaGCTTCTCTGTGACCTTTTC +
Preference number: 4 (lower is better)
Translates to: RQYLCSSDMWICDKSMKNMTVKS*LLCDLF
Trigger: GAAAAGGTCACAGAGAAGTCAGCTCTTCACAGTCAT...ATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR TCA 90 bp CTTTATCACACGAAGATTGACCTGCACACTCAGACTCTTGTGTTGGAAAAGGTTAGGTCTTCCTTTATCTaGAATGATACCACAGTAATG +
Preference number: 4 (lower is better)
Translates to: LYHTKIDLHTQTLVLEKVRSSFI*NDTTVM
Trigger: CATTACTGTGGTATCATTTCAGATAAAGGAAGACCT...AACCTTTTCCAACACAAGAGTCTGAGTGTGCAGGTCAATCTTCGTGTGATAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502709.1
ENST00000505791.5
CDS-3UTR TCA 90 bp AGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATTTATCACACGAAGATTaGCCTGCACACTCAGACTCT +
Preference number: 4 (lower is better)
Translates to: RQYLCSSDMWICDKSMKNLSHED*PAHSDS
Trigger: AGAGTCTGAGTGTGCAGGTCAATCTTCGTGTGATAA...ATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR TCA 90 bp CAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATTGTTCCATTCACCAGACATaGTATGAAGACCATCAGCAC +
Preference number: 4 (lower is better)
Translates to: QYLCSSDMWICDKSMKNCSIHQT*YEDHQH
Trigger: GTGCTGATGGTCTTCATATCATGTCTGGTGAATGGA...ACAATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR TCA 90 bp AGTAGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGTTGCATACACCACAATaGTCTTCTCTTGCAAGAGAC +
Preference number: 4 (lower is better)
Translates to: SRQYLCSSDMWICDKSMKLHTPQ*SSLARD
Trigger: GTCTCTTGCAAGAGAAGATCATTGTGGTGTATGCAA...CTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR TCA 90 bp CAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATTGTCCTGCTCCTCTGGTGTaGTTAAAATCCCCTTTAATG +
Preference number: 4 (lower is better)
Translates to: QYLCSSDMWICDKSMKNCPAPLV*LKSPLM
Trigger: CATTAAAGGGGATTTTAATCACACCAGAGGAGCAGG...ACAATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR TCA 90 bp AGTAGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGTTCTGGAAGAGGGTCTaGTGGGATAGTGTATTCATA +
Preference number: 4 (lower is better)
Translates to: SRQYLCSSDMWICDKSMKFWKRV*WDSVFI
Trigger: TATGAATACACTATCCCATCAGACCCTCTTCCAGAA...CTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR TCA 90 bp AGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATTTTTCCACAAGTTCGTaGACAAGGGGTCCATTCTGT +
Preference number: 4 (lower is better)
Translates to: RQYLCSSDMWICDKSMKNFSTSS*TRGPFC
Trigger: ACAGAATGGACCCCTTGTTCACGAACTTGTGGAAAA...ATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR TCA 90 bp AGTAGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGTTCCATGTCTTCCTGTaGTCTTATGCATGCATTGGA +
Preference number: 4 (lower is better)
Translates to: SRQYLCSSDMWICDKSMKFHVFL*SYACIG
Trigger: TCCAATGCATGCATAAGATCACAGGAAGACATGGAA...CTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR GCA 90 bp AGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATATGATAGGAAACCATTaGTGGGTCTGCAACCACTAC +
Preference number: 4 (lower is better)
Translates to: RQYLCSSDMWICDKSMKNMIGNH*WVCNHY
Trigger: GTAGTGGTTGCAGACCCAGCAATGGTTTCCTATCAT...ATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR GCA 90 bp TTCTCTAAAAACCTGTTCAACAGCATGAGGTTCATTATGTTTACACATCTCCTGAATGAATCTCCTGGCTaGATCTGCTCCATGATAGGA +
Preference number: 4 (lower is better)
Translates to: FSKNLFNSMRFIMFTHLLNESPG*ICSMIG
Trigger: TCCTATCATGGAGCAGATGCAGCCAGGAGATTCATT...CAGGAGATGTGTAAACATAATGAACCTCATGCTGTTGAACAGGTTTTTAGAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR GCA 90 bp CAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATTGTACACGAAGATTGACCTaGACACTCAGACTCTTGTGT +
Preference number: 4 (lower is better)
Translates to: QYLCSSDMWICDKSMKNCTRRLT*TLRLLC
Trigger: ACACAAGAGTCTGAGTGTGCAGGTCAATCTTCGTGT...ACAATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR GCA 90 bp AGTAGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATGAGAAGTATGTTTaGCCTTTGCTCCCAAGAGAC +
Preference number: 4 (lower is better)
Translates to: SRQYLCSSDMWICDKSMKNEKYV*PLLPRD
Trigger: GTCTCTTGGGAGCAAAGGGCAAACATACTTCTCATT...CTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CCA 90 bp TTCTCTAAAAACCTGTTCAACAGCATGAGGTTCATTATGTTTACACATCTCCTGATAGGAAACCATTGCTaGGTCTGCAACCACTACAGT +
Preference number: 4 (lower is better)
Translates to: FSKNLFNSMRFIMFTHLLIGNHC*VCNHYS
Trigger: ACTGTAGTGGTTGCAGACCCAGCAATGGTTTCCTAT...CAGGAGATGTGTAAACATAATGAACCTCATGCTGTTGAACAGGTTTTTAGAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CCA 90 bp AGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATTCAGCACACGATGGGTaGTCATTGTCATGGTTAATG +
Preference number: 4 (lower is better)
Translates to: RQYLCSSDMWICDKSMKNSAHDG*SLSWLM
Trigger: CATTAACCATGACAATGACCACCCATCGTGTGCTGA...ATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CCA 90 bp AGTAGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGACAAAAAGAAGCCAATaGCCCAAAAAGGATCTGGCA +
Preference number: 4 (lower is better)
Translates to: SRQYLCSSDMWICDKSMKTKRSQ*PKKDLA
Trigger: TGCCAGATCCTTTTTGGGCCATTGGCTTCTTTTTGT...CTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CCA 90 bp AGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATCCACCTTGTTTGACATaGTTGCTCATTGCACTTTCG +
Preference number: 4 (lower is better)
Translates to: RQYLCSSDMWICDKSMKNPPCLT*LLIALS
Trigger: CGAAAGTGCAATGAGCAACCATGTCAAACAAGGTGG...ATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR TCA 90 bp AGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATGAACCATCACAGAATTaGCACTCTGCGGATTTGTTT +
Preference number: 4 (lower is better)
Translates to: RQYLCSSDMWICDKSMKNEPSQN*HSADLF
Trigger: AAACAAATCCGCAGAGTGTCAATTCTGTGATGGTTC...ATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR TCA 90 bp CAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATTGTAGCAGCCAGTCTGGGTaGTGTTATGGTATTTACATT +
Preference number: 4 (lower is better)
Translates to: QYLCSSDMWICDKSMKNCSSQSG*CYGIYI
Trigger: AATGTAAATACCATAACATCACCCAGACTGGCTGCT...ACAATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR GCA 90 bp CAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATTGTTCTCACCTTCTACCTTaGACCATAATCCTGTGCAAA +
Preference number: 4 (lower is better)
Translates to: QYLCSSDMWICDKSMKNCSHLLP*TIILCK
Trigger: TTTGCACAGGATTATGGTGCAAGGTAGAAGGTGAGA...ACAATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR GCA 90 bp AGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATGGTCTAGCTTGGTTCTaGATTCTTTCTCACCTTCTA +
Preference number: 4 (lower is better)
Translates to: RQYLCSSDMWICDKSMKNGLAWF*ILSHLL
Trigger: TAGAAGGTGAGAAAGAATGCAGAACCAAGCTAGACC...ATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR GCA 90 bp AGTAGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGCACTTCTACATAACCTaGTCCTCTGGTGTGATTAAA +
Preference number: 4 (lower is better)
Translates to: SRQYLCSSDMWICDKSMKHFYIT*SSGVIK
Trigger: TTTAATCACACCAGAGGAGCAGGTTATGTAGAAGTG...CTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR GCA 90 bp AGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATAACTTTGATTCTTCTTaGTCCAGCAGGTATCACCAG +
Preference number: 4 (lower is better)
Translates to: RQYLCSSDMWICDKSMKNNFDSS*SSRYHQ
Trigger: CTGGTGATACCTGCTGGAGCAAGAAGAATCAAAGTT...ATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR GCA 90 bp CAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATTGTCTTCCTGTGATCTTATaGATGCATTGGATTACACGG +
Preference number: 4 (lower is better)
Translates to: QYLCSSDMWICDKSMKNCLPVIL*MHWITR
Trigger: CCGTGTAATCCAATGCATGCATAAGATCACAGGAAG...ACAATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CCA 90 bp CAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATTGTGACACACTTCTTTCTTaGGTTGGTACATCTAACGGT +
Preference number: 4 (lower is better)
Translates to: QYLCSSDMWICDKSMKNCDTLLS*VGTSNG
Trigger: ACCGTTAGATGTACCAACCCAAGAAAGAAGTGTGTC...ACAATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CCA 90 bp AGTAGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGATCTTATGCATGCATTaGATTACACGGGACTGCATT +
Preference number: 4 (lower is better)
Translates to: SRQYLCSSDMWICDKSMKILCMH*ITRDCI
Trigger: AATGCAGTCCCGTGTAATCCAATGCATGCATAAGAT...CTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CCA 90 bp CAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATTGTTCAGAGCAGCCAGTCTaGGTGATGTTATGGTATTTA +
Preference number: 4 (lower is better)
Translates to: QYLCSSDMWICDKSMKNCSEQPV*VMLWYL
Trigger: TAAATACCATAACATCACCCAGACTGGCTGCTCTGA...ACAATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CCA 90 bp CACACGAAGATTGACCTGCACACTCAGACTCTTGTGTTGGAAAAGGTTAAATACCTCAGACTCTTGTGTTaGAAAAGGTTAAATACACAT +
Preference number: 4 (lower is better)
Translates to: HTKIDLHTQTLVLEKVKYLRLLC*KRLNTH
Trigger: ATGTGTATTTAACCTTTTCCAACACAAGAGTCTGAG...GTATTTAACCTTTTCCAACACAAGAGTCTGAGTGTGCAGGTCAATCTTCGTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502709.1
ENST00000505791.5
3UTR CAA 72 bp TTTATCACACGAAGATTGACCTGCACACTCAGACTCTaGTGTTGGAAAAGGTTAAATACACATGTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: FITRRLTCTLRL*CWKRLNTHVFL
Trigger: AAGGAAGACATGTGTATTTAACCTTTTCCAACACAAGAGTCTGAGTGTGCAGGTCAATCTTCGTGTGATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502709.1
ENST00000505791.5
CDS-3UTR TCA 90 bp CAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATTGTTACTGGCCTTTGACCTaGGAAATCTTTCCAAATCTT +
Preference number: 4 (lower is better)
Translates to: QYLCSSDMWICDKSMKNCYWPLT*EIFPNL
Trigger: AAGATTTGGAAAGATTTCTCAGGTCAAAGGCCAGTA...ACAATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR TCA 90 bp CAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATTGTACCTGTTCAACAGCATaGGGTTCATTATGTTTACAC +
Preference number: 4 (lower is better)
Translates to: QYLCSSDMWICDKSMKNCTCSTA*GSLCLH
Trigger: GTGTAAACATAATGAACCTCATGCTGTTGAACAGGT...ACAATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR GCA 90 bp AGTAGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGTTTCCAAATCTTCCTTaGTACATCGAGACCATGAAA +
Preference number: 4 (lower is better)
Translates to: SRQYLCSSDMWICDKSMKFPNLP*YIETMK
Trigger: TTTCATGGTCTCGATGTAGCAAGGAAGATTTGGAAA...CTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCTACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CCA 90 bp CAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATTGTTCTGGTGGAGTTTCATaGAGCAGAATAAGCTTTATC +
Preference number: 4 (lower is better)
Translates to: QYLCSSDMWICDKSMKNCSGGVS*SRISFI
Trigger: GATAAAGCTTATTCTGCTCCATGAAACTCCACCAGA...ACAATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CCA 90 bp AGTAGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGTTCTGTATTGTTTTCTaGGACCATTACAATCCCTTG +
Preference number: 4 (lower is better)
Translates to: SRQYLCSSDMWICDKSMKFCIVF*DHYNPL
Trigger: CAAGGGATTGTAATGGTCCCAGAAAACAATACAGAA...CTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CCA 90 bp CAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATTGTATTCAATGTTATTGGTaGGGAGAGAGTAGCACCTTA +
Preference number: 4 (lower is better)
Translates to: QYLCSSDMWICDKSMKNCIQCYW*GESSTL
Trigger: TAAGGTGCTACTCTCTCCCCACCAATAACATTGAAT...ACAATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CCA 90 bp TTGACCTGCACACTCAGACTCTTGTGTTGGAAAAGGTTAAATACACATGTCTTCCTCAGACTCTTGTGTTaGAAAAGGTTAAATACACAT +
Preference number: 4 (lower is better)
Translates to: LTCTLRLLCWKRLNTHVFLRLLC*KRLNTH
Trigger: ATGTGTATTTAACCTTTTCCAACACAAGAGTCTGAG...GAAGACATGTGTATTTAACCTTTTCCAACACAAGAGTCTGAGTGTGCAGGTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502709.1
ENST00000505791.5
CDS-3UTR TCA 90 bp TTCTCTAAAAACCTGTTCAACAGCATGAGGTTCATTATGTTTACACATCTCCTGAGGTCTTCCTTTATCTaGAATGATACCACAGTAATG +
Preference number: 4 (lower is better)
Translates to: FSKNLFNSMRFIMFTHLLRSSFI*NDTTVM
Trigger: CATTACTGTGGTATCATTTCAGATAAAGGAAGACCT...CAGGAGATGTGTAAACATAATGAACCTCATGCTGTTGAACAGGTTTTTAGAGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR TCA 90 bp TTCTCTAAAAACCTGTTCAACAGCATGAGGTTCATTATGTTTACACATCTCCTGAGACATGTGGATATGTaGCAAGTCTATGAAGAATTG +
Preference number: 4 (lower is better)
Translates to: FSKNLFNSMRFIMFTHLLRHVDM*QVYEEL
Trigger: CAATTCTTCATAGACTTGTCACATATCCACATGTCT...CAGGAGATGTGTAAACATAATGAACCTCATGCTGTTGAACAGGTTTTTAGAGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR GCA 90 bp TTCTCTAAAAACCTGTTCAACAGCATGAGGTTCATTATGTTTACACATCTCCTGTGCATGATTTTCCATTaGCATTGCATACACCACAAT +
Preference number: 4 (lower is better)
Translates to: FSKNLFNSMRFIMFTHLLCMIFH*HCIHHN
Trigger: ATTGTGGTGTATGCAATGGCAATGGAAAATCATGCA...CAGGAGATGTGTAAACATAATGAACCTCATGCTGTTGAACAGGTTTTTAGAGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CCA 90 bp CAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATTGTTGTTCATCAGACATGTaGATATGTGACAAGTCTATG +
Preference number: 4 (lower is better)
Translates to: QYLCSSDMWICDKSMKNCCSSDM*ICDKSM
Trigger: CATAGACTTGTCACATATCCACATGTCTGATGAACA...ACAATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR GCA 90 bp AGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATATTTTCCATTGCCATTaGATACACCACAATGATCTT +
Preference number: 4 (lower is better)
Translates to: RQYLCSSDMWICDKSMKNIFHCH*IHHNDL
Trigger: AAGATCATTGTGGTGTATGCAATGGCAATGGAAAAT...ATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CCA 90 bp AGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATATACAGGGAAATGGGTaGATCAATGTTTTCTTTGTT +
Preference number: 4 (lower is better)
Translates to: RQYLCSSDMWICDKSMKNIQGNG*INVFFV
Trigger: AACAAAGAAAACATTGATCCACCCATTTCCCTGTAT...ATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CCA 90 bp CAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATTGTAAAGATACAGGGAAATaGGTGGATCAATGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: QYLCSSDMWICDKSMKNCKDTGK*VDQCFL
Trigger: AAGAAAACATTGATCCACCCATTTCCCTGTATCTTT...ACAATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS GCA 90 bp CAGCGAGCCAGGGTGCCGCAGCACAGCTCCGGTGTAGAAGCAGCCTaGGTCTGGTGGCGCGGGAGGTTGCGGGGCGGATGCTGCCCCCGT +
Preference number: 5 (lower is better)
Translates to: QRARVPQHSSGVEAA*VWWRGRLRGGCCPR
Trigger: ACGGGGGCAGCATCCGCCCCGCAACCTCCCGCGCCACCAGACGCAGGCTGCTTCTACACCGGAGCTGTGCTGCGGCACCCTGGCTCGCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS GCA 90 bp AGCAGCAGATGTGAGTCAGGCGCATCTCGCGGTTCTTCCCCATACTaGGCTCCCGCGGCCGCGGCTTCTCGCCCGGCGCACGCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: SSRCESGASRGSSPY*APAAAASRPAHASS
Trigger: GCTGGAGGCGTGCGCCGGGCGAGAAGCCGCGGCCGCGGGAGCGCAGTATGGGGAAGAACCGCGAGATGCGCCTGACTCACATCTGCTGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274487.9
ENST00000505791.5
CDS TCA 90 bp CCCTTGCTTCAGAATCTAGCCCAGGACATTTGCGCTCTCGACTGCTaGTCCCAGCACTGCAGGTTCGGCTACAAGGACTCCACAGGCTCC +
Preference number: 5 (lower is better)
Translates to: PLLQNLAQDICALDC*SQHCRFGYKDSTGS
Trigger: GGAGCCTGTGGAGTCCTTGTAGCCGAACCTGCAGTGCTGGGATCAGCAGTCGAGAGCGCAAATGTCCTGGGCTAGATTCTGAAGCAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS TCA 90 bp ACAAGGACTCCACAGGCTCCACTCTCCGGCCAGATGTTCAGGTGCTaGGGTCCTGCTGGTACATTCTCCAGCCTTACACCACTTACCAAG +
Preference number: 5 (lower is better)
Translates to: TRTPQAPLSGQMFRC*GPAGTFSSLTPLTK
Trigger: CTTGGTAAGTGGTGTAAGGCTGGAGAATGTACCAGCAGGACCTCAGCACCTGAACATCTGGCCGGAGAGTGGAGCCTGTGGAGTCCTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS GCA 90 bp TCCACAGGCTCCACTCTCCGGCCAGATGTTCAGGTGCTGAGGTCCTaGTGGTACATTCTCCAGCCTTACACCACTTACCAAGGTCACAGT +
Preference number: 5 (lower is better)
Translates to: STGSTLRPDVQVLRS*WYILQPYTTYQGHS
Trigger: ACTGTGACCTTGGTAAGTGGTGTAAGGCTGGAGAATGTACCAGCAGGACCTCAGCACCTGAACATCTGGCCGGAGAGTGGAGCCTGTGGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS CCA 90 bp ACAGGCTCCACTCTCCGGCCAGATGTTCAGGTGCTGAGGTCCTGCTaGTACATTCTCCAGCCTTACACCACTTACCAAGGTCACAGTCAG +
Preference number: 5 (lower is better)
Translates to: TGSTLRPDVQVLRSC*YILQPYTTYQGHSQ
Trigger: CTGACTGTGACCTTGGTAAGTGGTGTAAGGCTGGAGAATGTACCAGCAGGACCTCAGCACCTGAACATCTGGCCGGAGAGTGGAGCCTGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CAA 90 bp TTCTCTAAAAACCTGTTCAACAGCATGAGGTTCATTATGTTTACACATCTCCTGTGGTGGCGCGGGAGGTaGCGGGGCGGATGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: FSKNLFNSMRFIMFTHLLWWRGR*RGGCCP
Trigger: GGGGCAGCATCCGCCCCGCAACCTCCCGCGCCACCA...CAGGAGATGTGTAAACATAATGAACCTCATGCTGTTGAACAGGTTTTTAGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CAA 90 bp TTCTCTAAAAACCTGTTCAACAGCATGAGGTTCATTATGTTTACACATCTCCTGGGCCGGGGCCGGGATTaGGCCGCTGTTCCACTGCGA +
Preference number: 5 (lower is better)
Translates to: FSKNLFNSMRFIMFTHLLGRGRD*AAVPLR
Trigger: TCGCAGTGGAACAGCGGCCAAATCCCGGCCCCGGCC...CAGGAGATGTGTAAACATAATGAACCTCATGCTGTTGAACAGGTTTTTAGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CAA 90 bp AGTAGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGTGGGCAGAGGCGGGCTaGGGCCCAATGCAGTCCCTC +
Preference number: 5 (lower is better)
Translates to: SRQYLCSSDMWICDKSMKWAEAG*GPMQSL
Trigger: GAGGGACTGCATTGGGCCCAAGCCCGCCTCTGCCCA...CTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS GCA 90 bp GTCATCCCTGGCAGCTTGGAGGGAACCATCACAGAATTGACACTCTaGGGATTTGTTTGTAGCAAGCAGTTACTGGCCTTTGACCTGAGA +
Preference number: 5 (lower is better)
Translates to: VIPGSLEGTITELTL*GFVCSKQLLAFDLR
Trigger: TCTCAGGTCAAAGGCCAGTAACTGCTTGCTACAAACAAATCCGCAGAGTGTCAATTCTGTGATGGTTCCCTCCAAGCTGCCAGGGATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS CCA 90 bp CAGTCCCTCTCTCGGGCTCTAATCAGTGTTCCATTGCTCAGTTGTTaGGTACAGGCCACTTGTCTGCTCTGCATTCCTTTTCCACAAGTT +
Preference number: 5 (lower is better)
Translates to: QSLSRALISVPLLSC*VQATCLLCIPFPQV
Trigger: AACTTGTGGAAAAGGAATGCAGAGCAGACAAGTGGCCTGTACCCAACAACTGAGCAATGGAACACTGATTAGAGCCCGAGAGAGGGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274487.9
ENST00000509467.1
CDS TCA 90 bp CAGTGTATGTCATCCCTGGCAGCTTGGAGGGAACCATCACAGAATTaGCACTCTGCGGATTTGTTTGTAGCAAGCAGTTACTGGCCTTTG +
Preference number: 5 (lower is better)
Translates to: QCMSSLAAWREPSQN*HSADLFVASSYWPL
Trigger: CAAAGGCCAGTAACTGCTTGCTACAAACAAATCCGCAGAGTGTCAATTCTGTGATGGTTCCCTCCAAGCTGCCAGGGATGACATACACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS TCA 90 bp GGTACAGGCCACTTGTCTGCTCTGCATTCCTTTTCCACAAGTTCGTaGACAAGGGGTCCATTCTGTCATCATCCACCTTGTTTGACATGG +
Preference number: 5 (lower is better)
Translates to: GTGHLSALHSFSTSS*TRGPFCHHPPCLTW
Trigger: CCATGTCAAACAAGGTGGATGATGACAGAATGGACCCCTTGTTCACGAACTTGTGGAAAAGGAATGCAGAGCAGACAAGTGGCCTGTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274487.9
ENST00000509467.1
CDS TCA 90 bp GAGAGGACACACTTCTTTCTTGGGTTGGTACATCTAACGGTCCGATaGCGTATGCCTTTGCCACACTTGACTGAACACTCAGACCACACT +
Preference number: 5 (lower is better)
Translates to: ERTHFFLGLVHLTVR*RMPLPHLTEHSDHT
Trigger: AGTGTGGTCTGAGTGTTCAGTCAAGTGTGGCAAAGGCATACGTCATCGGACCGTTAGATGTACCAACCCAAGAAAGAAGTGTGTCCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274487.9
ENST00000509467.1
CDS GCA 90 bp AGTGTTCCATTGCTCAGTTGTTGGGTACAGGCCACTTGTCTGCTCTaGATTCCTTTTCCACAAGTTCGTGAACAAGGGGTCCATTCTGTC +
Preference number: 5 (lower is better)
Translates to: SVPLLSCWVQATCLL*IPFPQVREQGVHSV
Trigger: GACAGAATGGACCCCTTGTTCACGAACTTGTGGAAAAGGAATGCAGAGCAGACAAGTGGCCTGTACCCAACAACTGAGCAATGGAACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274487.9
ENST00000509467.1
CDS GCA 90 bp CCATGTCTTCCTGTGATCTTATGCATGCATTGGATTACACGGGACTaGATTCCTTTGCCACAGGTAATTGAGCACTTAGACCAGTCACCC +
Preference number: 5 (lower is better)
Translates to: PCLPVILCMHWITRD*IPLPQVIEHLDQSP
Trigger: GGGTGACTGGTCTAAGTGCTCAATTACCTGTGGCAAAGGAATGCAGTCCCGTGTAATCCAATGCATGCATAAGATCACAGGAAGACATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274487.9
ENST00000509467.1
CDS TCA 90 bp CTCGGAGAGCTAAATAGCTATGTGCCGGCTTTTCCTCCACAACTTTaGTTCTTCTTGCTCCAGCAGGTATCACCAGCACTTCTACATAAC +
Preference number: 5 (lower is better)
Translates to: LGELNSYVPAFPPQL*FFLLQQVSPALLHN
Trigger: GTTATGTAGAAGTGCTGGTGATACCTGCTGGAGCAAGAAGAATCAAAGTTGTGGAGGAAAAGCCGGCACATAGCTATTTAGCTCTCCGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CAA 90 bp CTCTGTGACCTTTTCCTCCATGGACCTTTTCTGCCTATATACACGGTGTGGGTGTGCACACTCAGACTCTaGTGTTGGAAAAGGTTAAAT +
Preference number: 5 (lower is better)
Translates to: LCDLFLHGPFLPIYTVWVCTLRL*CWKRLN
Trigger: ATTTAACCTTTTCCAACACAAGAGTCTGAGTGTGCA...CACCCACACCGTGTATATAGGCAGAAAAGGTCCATGGAGGAAAAGGTCACAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505791.5
CDS-3UTR CAA 90 bp AGTAGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGGTCATCCCTGGCAGCTaGGAGGGAACCATCACAGAA +
Preference number: 5 (lower is better)
Translates to: SRQYLCSSDMWICDKSMKVIPGS*EGTITE
Trigger: TTCTGTGATGGTTCCCTCCAAGCTGCCAGGGATGAC...CTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS GCA 90 bp AACACTATAAGCCTGACATTGCCAGTCTCTGAATCCAGGCAAACCTaGAGGACAAGGTGGATTCTCACATATTCTGTATTGTTTTCTGGG +
Preference number: 5 (lower is better)
Translates to: NTISLTLPVSESRQT*RTRWILTYSVLFSG
Trigger: CCCAGAAAACAATACAGAATATGTGAGAATCCACCTTGTCCTGCAGGTTTGCCTGGATTCAGAGACTGGCAATGTCAGGCTTATAGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS CCA 90 bp TGGTTTTTCTTCATCCAGGACAGCTTGCCACTGAAGTATATGCTTTaGGGAGGAAGTTCTAACACTATAAGCCTGACATTGCCAGTCTCT +
Preference number: 5 (lower is better)
Translates to: WFFFIQDSLPLKYML*GGSSNTISLTLPVS
Trigger: AGAGACTGGCAATGTCAGGCTTATAGTGTTAGAACTTCCTCCCCAAAGCATATACTTCAGTGGCAAGCTGTCCTGGATGAAGAAAAACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CAA 90 bp CAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATTGTTCTAGCCCAGGACATTaGCGCTCTCGACTGCTGATC +
Preference number: 5 (lower is better)
Translates to: QYLCSSDMWICDKSMKNCSSPGH*RSRLLI
Trigger: GATCAGCAGTCGAGAGCGCAAATGTCCTGGGCTAGA...ACAATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS CCA 90 bp TTTAATCCATTCACCAGACATGATATGAAGACCATCAGCACACGATaGGTGGTCATTGTCATGGTTAATGCCCATGTTGTGACCCATTTC +
Preference number: 5 (lower is better)
Translates to: FNPFTRHDMKTISTR*VVIVMVNAHVVTHF
Trigger: GAAATGGGTCACAACATGGGCATTAACCATGACAATGACCACCCATCGTGTGCTGATGGTCTTCATATCATGTCTGGTGAATGGATTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS CCA 90 bp TCCTGTGCAAATAACATGCTGCATCTCCTGACAAAAAGAAGCCAATaGCCCAAAAAGGATCTGGCATTGTTCATCAGCAGTGTATGTCAT +
Preference number: 5 (lower is better)
Translates to: SCANNMLHLLTKRSQ*PKKDLALFISSVCH
Trigger: ATGACATACACTGCTGATGAACAATGCCAGATCCTTTTTGGGCCATTGGCTTCTTTTTGTCAGGAGATGCAGCATGTTATTTGCACAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS CCA 90 bp AACCTGCAGGACAAGGTGGATTCTCACATATTCTGTATTGTTTTCTaGGACCATTACAATCCCTTGCTTCAGAATCTAGCCCAGGACATT +
Preference number: 5 (lower is better)
Translates to: NLQDKVDSHIFCIVF*DHYNPLLQNLAQDI
Trigger: AATGTCCTGGGCTAGATTCTGAAGCAAGGGATTGTAATGGTCCCAGAAAACAATACAGAATATGTGAGAATCCACCTTGTCCTGCAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CAA 90 bp CGAAGATTGACCTGCACACTCAGACTCTTGTGTTGGAAAAGGTTAAATACACATCATGATAGGAAACCATaGCTGGGTCTGCAACCACTA +
Preference number: 5 (lower is better)
Translates to: RRLTCTLRLLCWKRLNTHHDRKP*LGLQPL
Trigger: TAGTGGTTGCAGACCCAGCAATGGTTTCCTATCATG...ATGTGTATTTAACCTTTTCCAACACAAGAGTCTGAGTGTGCAGGTCAATCTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502709.1
ENST00000505791.5
CDS-3UTR CAA 90 bp ACACGAAGATTGACCTGCACACTCAGACTCTTGTGTTGGAAAAGGTTAAATACACATGATAGGAAACCATaGCTGGGTCTGCAACCACTA +
Preference number: 5 (lower is better)
Translates to: TRRLTCTLRLLCWKRLNTHDRKP*LGLQPL
Trigger: TAGTGGTTGCAGACCCAGCAATGGTTTCCTATCATG...TGTATTTAACCTTTTCCAACACAAGAGTCTGAGTGTGCAGGTCAATCTTCGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502709.1
ENST00000505791.5
CDS-3UTR CAA 90 bp AGCAGAATAAGCTTTATCACACGAAGATTGACCTGCACACTCAGACTCTTGTGTTTTATCACACGAAGATaGACCTGCACACTCAGACTC +
Preference number: 5 (lower is better)
Translates to: SRISFITRRLTCTLRLLCFITRR*TCTLRL
Trigger: GAGTCTGAGTGTGCAGGTCAATCTTCGTGTGATAAA...ACACAAGAGTCTGAGTGTGCAGGTCAATCTTCGTGTGATAAAGCTTATTCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502709.1
ENST00000505791.5
CDS-3UTR CAA 90 bp AGTAGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAGTCAGTTCCATCCATaGGTGGGTCTAGCTTGGTTC +
Preference number: 5 (lower is better)
Translates to: SRQYLCSSDMWICDKSMKSQFHP*VGLAWF
Trigger: GAACCAAGCTAGACCCACCAATGGATGGAACTGACT...CTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CAA 90 bp AGTAGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGTTGTGCAGGACACTGTaGTCTTCCTTTCTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: SRQYLCSSDMWICDKSMKLCRTL*SSFLLL
Trigger: GAGGAGGAGAAAGGAAGACAACAGTGTCCTGCACAA...CTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CAA 90 bp AGTAGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGTCCATTGCTCAGTTGTaGGGTACAGGCCACTTGTCT +
Preference number: 5 (lower is better)
Translates to: SRQYLCSSDMWICDKSMKSIAQL*GTGHLS
Trigger: AGACAAGTGGCCTGTACCCAACAACTGAGCAATGGA...CTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS CCA 90 bp GAAAAACATTCATTTCCATGTCTTCCTGTGATCTTATGCATGCATTaGATTACACGGGACTGCATTCCTTTGCCACAGGTAATTGAGCAC +
Preference number: 5 (lower is better)
Translates to: EKHSFPCLPVILCMH*ITRDCIPLPQVIEH
Trigger: GTGCTCAATTACCTGTGGCAAAGGAATGCAGTCCCGTGTAATCCAATGCATGCATAAGATCACAGGAAGACATGGAAATGAATGTTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274487.9
ENST00000509467.1
CDS-3UTR CAA 90 bp AGTAGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGCATGATAGGAAACCATaGCTGGGTCTGCAACCACTA +
Preference number: 5 (lower is better)
Translates to: SRQYLCSSDMWICDKSMKHDRKP*LGLQPL
Trigger: TAGTGGTTGCAGACCCAGCAATGGTTTCCTATCATG...CTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CAA 90 bp AGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATCACGATGGGTGGTCATaGTCATGGTTAATGCCCATG +
Preference number: 5 (lower is better)
Translates to: RQYLCSSDMWICDKSMKNHDGWS*SWLMPM
Trigger: CATGGGCATTAACCATGACAATGACCACCCATCGTG...ATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CAA 90 bp AGTAGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGACTATAAGCCTGACATaGCCAGTCTCTGAATCCAGG +
Preference number: 5 (lower is better)
Translates to: SRQYLCSSDMWICDKSMKTISLT*PVSESR
Trigger: CCTGGATTCAGAGACTGGCAATGTCAGGCTTATAGT...CTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CAA 90 bp AGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATTTGGGTACAGGCCACTaGTCTGCTCTGCATTCCTTT +
Preference number: 5 (lower is better)
Translates to: RQYLCSSDMWICDKSMKNLGTGH*SALHSF
Trigger: AAAGGAATGCAGAGCAGACAAGTGGCCTGTACCCAA...ATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CAA 90 bp TTCTCTAAAAACCTGTTCAACAGCATGAGGTTCATTATGTTTACACATCTCCTGTGTTCCATTGCTCAGTaGTTGGGTACAGGCCACTTG +
Preference number: 5 (lower is better)
Translates to: FSKNLFNSMRFIMFTHLLCSIAQ*LGTGHL
Trigger: CAAGTGGCCTGTACCCAACAACTGAGCAATGGAACA...CAGGAGATGTGTAAACATAATGAACCTCATGCTGTTGAACAGGTTTTTAGAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CAA 90 bp AGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATATGCCTTTGCCACACTaGACTGAACACTCAGACCAC +
Preference number: 5 (lower is better)
Translates to: RQYLCSSDMWICDKSMKNMPLPH*TEHSDH
Trigger: GTGGTCTGAGTGTTCAGTCAAGTGTGGCAAAGGCAT...ATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS GCA 90 bp TTTTCTGAGGAAAAACATTCATTTCCATGTCTTCCTGTGATCTTATaGATGCATTGGATTACACGGGACTGCATTCCTTTGCCACAGGTA +
Preference number: 5 (lower is better)
Translates to: FSEEKHSFPCLPVIL*MHWITRDCIPLPQV
Trigger: TACCTGTGGCAAAGGAATGCAGTCCCGTGTAATCCAATGCATGCATAAGATCACAGGAAGACATGGAAATGAATGTTTTTCCTCAGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274487.9
ENST00000509467.1
CDS-3UTR CAA 90 bp AGAATAAGCTTTATCACACGAAGATTGACCTGCACACTCAGACTCTTGTGTTGGTGCACACTCAGACTCTaGTGTTGGAAAAGGTTAAAT +
Preference number: 5 (lower is better)
Translates to: RISFITRRLTCTLRLLCWCTLRL*CWKRLN
Trigger: ATTTAACCTTTTCCAACACAAGAGTCTGAGTGTGCA...CCAACACAAGAGTCTGAGTGTGCAGGTCAATCTTCGTGTGATAAAGCTTATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502709.1
ENST00000505791.5
CDS-3UTR CAA 90 bp ATTGACCTGCACACTCAGACTCTTGTGTTGGAAAAGGTTAAATACACATGTCTTTTTATCACACGAAGATaGACCTGCACACTCAGACTC +
Preference number: 5 (lower is better)
Translates to: IDLHTQTLVLEKVKYTCLFITRR*TCTLRL
Trigger: GAGTCTGAGTGTGCAGGTCAATCTTCGTGTGATAAA...AAGACATGTGTATTTAACCTTTTCCAACACAAGAGTCTGAGTGTGCAGGTCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502709.1
ENST00000505791.5
CDS-3UTR CAA 90 bp AGTAGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGTTCTCACCTTCTACCTaGCACCATAATCCTGTGCAA +
Preference number: 5 (lower is better)
Translates to: SRQYLCSSDMWICDKSMKFSPST*HHNPVQ
Trigger: TTGCACAGGATTATGGTGCAAGGTAGAAGGTGAGAA...CTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CAA 90 bp AGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATGACCATTACAATCCCTaGCTTCAGAATCTAGCCCAG +
Preference number: 5 (lower is better)
Translates to: RQYLCSSDMWICDKSMKNDHYNP*LQNLAQ
Trigger: CTGGGCTAGATTCTGAAGCAAGGGATTGTAATGGTC...ATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CAA 90 bp TTCTCTAAAAACCTGTTCAACAGCATGAGGTTCATTATGTTTACACATCTCCTGTCTGGCACCTGCCATTaGCACAGATATCTAATCCCT +
Preference number: 5 (lower is better)
Translates to: FSKNLFNSMRFIMFTHLLSGTCH*HRYLIP
Trigger: AGGGATTAGATATCTGTGCAAATGGCAGGTGCCAGA...CAGGAGATGTGTAAACATAATGAACCTCATGCTGTTGAACAGGTTTTTAGAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CAA 90 bp AGTAGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGCTATTAATAGACTGTTaGCCAGCATCTCGGAGAGCT +
Preference number: 5 (lower is better)
Translates to: SRQYLCSSDMWICDKSMKLLIDC*PASRRA
Trigger: AGCTCTCCGAGATGCTGGCAAACAGTCTATTAATAG...CTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CAA 90 bp CAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATTGTGTAGTTCCAGCCAAATaGAAGGCTCCAGAGTGTTCA +
Preference number: 5 (lower is better)
Translates to: QYLCSSDMWICDKSMKNCVVPAK*KAPECS
Trigger: TGAACACTCTGGAGCCTTCAATTTGGCTGGAACTAC...ACAATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CAA 90 bp TTCTCTAAAAACCTGTTCAACAGCATGAGGTTCATTATGTTTACACATCTCCTGCACTTCTTTCTTGGGTaGGTACATCTAACGGTCCGA +
Preference number: 5 (lower is better)
Translates to: FSKNLFNSMRFIMFTHLLHFFLG*VHLTVR
Trigger: TCGGACCGTTAGATGTACCAACCCAAGAAAGAAGTG...CAGGAGATGTGTAAACATAATGAACCTCATGCTGTTGAACAGGTTTTTAGAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CAA 90 bp CAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATTGTTTTCTCATTGCAGGGTaGAAGATGGCATGGCCTGTA +
Preference number: 5 (lower is better)
Translates to: QYLCSSDMWICDKSMKNCFLIAG*KMAWPV
Trigger: TACAGGCCATGCCATCTTCAACCCTGCAATGAGAAA...ACAATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CAA 90 bp CACACGAAGATTGACCTGCACACTCAGACTCTTGTGTTGGAAAAGGTTAAATACATGGCCATTGTATCATaGAGTGGCTCAATAAATATG +
Preference number: 5 (lower is better)
Translates to: HTKIDLHTQTLVLEKVKYMAIVS*SGSINM
Trigger: CATATTTATTGAGCCACTCAATGATACAATGGCCAT...GTATTTAACCTTTTCCAACACAAGAGTCTGAGTGTGCAGGTCAATCTTCGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502709.1
ENST00000505791.5
CDS-3UTR CAA 90 bp AGCAGAATAAGCTTTATCACACGAAGATTGACCTGCACACTCAGACTCTTGTGTATGGCCATTGTATCATaGAGTGGCTCAATAAATATG +
Preference number: 5 (lower is better)
Translates to: SRISFITRRLTCTLRLLCMAIVS*SGSINM
Trigger: CATATTTATTGAGCCACTCAATGATACAATGGCCAT...ACACAAGAGTCTGAGTGTGCAGGTCAATCTTCGTGTGATAAAGCTTATTCTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502709.1
ENST00000505791.5
CDS-3UTR CAA 90 bp TTCTCTAAAAACCTGTTCAACAGCATGAGGTTCATTATGTTTACACATCTCCTGTTTATCACACGAAGATaGACCTGCACACTCAGACTC +
Preference number: 5 (lower is better)
Translates to: FSKNLFNSMRFIMFTHLLFITRR*TCTLRL
Trigger: GAGTCTGAGTGTGCAGGTCAATCTTCGTGTGATAAA...CAGGAGATGTGTAAACATAATGAACCTCATGCTGTTGAACAGGTTTTTAGAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CAA 90 bp CAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATTGTGGAACCATCACAGAATaGACACTCTGCGGATTTGTT +
Preference number: 5 (lower is better)
Translates to: QYLCSSDMWICDKSMKNCGTITE*TLCGFV
Trigger: AACAAATCCGCAGAGTGTCAATTCTGTGATGGTTCC...ACAATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CAA 90 bp TTCTCTAAAAACCTGTTCAACAGCATGAGGTTCATTATGTTTACACATCTCCTGATTGGTGGGTCTAGCTaGGTTCTGCATTCTTTCTCA +
Preference number: 5 (lower is better)
Translates to: FSKNLFNSMRFIMFTHLLIGGSS*VLHSFS
Trigger: TGAGAAAGAATGCAGAACCAAGCTAGACCCACCAAT...CAGGAGATGTGTAAACATAATGAACCTCATGCTGTTGAACAGGTTTTTAGAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CAA 90 bp AGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATTTCATCCAGGACAGCTaGCCACTGAAGTATATGCTT +
Preference number: 5 (lower is better)
Translates to: RQYLCSSDMWICDKSMKNFIQDS*PLKYML
Trigger: AAGCATATACTTCAGTGGCAAGCTGTCCTGGATGAA...ATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CAA 90 bp TTCTCTAAAAACCTGTTCAACAGCATGAGGTTCATTATGTTTACACATCTCCTGCATCATCCACCTTGTTaGACATGGTTGCTCATTGCA +
Preference number: 5 (lower is better)
Translates to: FSKNLFNSMRFIMFTHLLHHPPC*TWLLIA
Trigger: TGCAATGAGCAACCATGTCAAACAAGGTGGATGATG...CAGGAGATGTGTAAACATAATGAACCTCATGCTGTTGAACAGGTTTTTAGAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CAA 90 bp CAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATTGTCTGTCATCATCCACCTaGTTTGACATGGTTGCTCAT +
Preference number: 5 (lower is better)
Translates to: QYLCSSDMWICDKSMKNCLSSST*FDMVAH
Trigger: ATGAGCAACCATGTCAAACAAGGTGGATGATGACAG...ACAATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CAA 90 bp CAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATTGTCTAATCAGTGTTCCATaGCTCAGTTGTTGGGTACAG +
Preference number: 5 (lower is better)
Translates to: QYLCSSDMWICDKSMKNCLISVP*LSCWVQ
Trigger: CTGTACCCAACAACTGAGCAATGGAACACTGATTAG...ACAATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CAA 90 bp TTCTCTAAAAACCTGTTCAACAGCATGAGGTTCATTATGTTTACACATCTCCTGGATCTTATGCATGCATaGGATTACACGGGACTGCAT +
Preference number: 5 (lower is better)
Translates to: FSKNLFNSMRFIMFTHLLDLMHA*DYTGLH
Trigger: ATGCAGTCCCGTGTAATCCAATGCATGCATAAGATC...CAGGAGATGTGTAAACATAATGAACCTCATGCTGTTGAACAGGTTTTTAGAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS TCA 90 bp TTAATGATCTTGCATGATTTTCCATTGCCATTGCATACACCACAATaGTCTTCTCTTGCAAGAGACCCTAATAAACCATCACAGCCAACT +
Preference number: 5 (lower is better)
Translates to: LMILHDFPLPLHTPQ*SSLARDPNKPSQPT
Trigger: AGTTGGCTGTGATGGTTTATTAGGGTCTCTTGCAAGAGAAGATCATTGTGGTGTATGCAATGGCAATGGAAAATCATGCAAGATCATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS GCA 90 bp GGAGTTTCATGGAGCAGAATAAGCTTTATCACACGAAGATTGACCTaGACACTCAGACTCTTGTGTTGGAAAAGGTTAAATACCATATTT +
Preference number: 5 (lower is better)
Translates to: GVSWSRISFITRRLT*TLRLLCWKRLNTIF
Trigger: AAATATGGTATTTAACCTTTTCCAACACAAGAGTCTGAGTGTGCAGGTCAATCTTCGTGTGATAAAGCTTATTCTGCTCCATGAAACTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CAA 90 bp ACACGAAGATTGACCTGCACACTCAGACTCTTGTGTTGGAAAAGGTTAAATACAAATATGAAGTCCTCATaGAGCTGTATAAATCCCATC +
Preference number: 5 (lower is better)
Translates to: TRRLTCTLRLLCWKRLNTNMKSS*SCINPI
Trigger: GATGGGATTTATACAGCTCAATGAGGACTTCATATT...TGTATTTAACCTTTTCCAACACAAGAGTCTGAGTGTGCAGGTCAATCTTCGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502709.1
ENST00000505791.5
CDS-3UTR CAA 90 bp AGTAGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGTGCACACTCAGACTCTaGTGTTGGAAAAGGTTAAAT +
Preference number: 5 (lower is better)
Translates to: SRQYLCSSDMWICDKSMKCTLRL*CWKRLN
Trigger: ATTTAACCTTTTCCAACACAAGAGTCTGAGTGTGCA...CTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CAA 90 bp AGTAGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGTCCCCTTTAATGATCTaGCATGATTTTCCATTGCCA +
Preference number: 5 (lower is better)
Translates to: SRQYLCSSDMWICDKSMKSPLMI*HDFPLP
Trigger: TGGCAATGGAAAATCATGCAAGATCATTAAAGGGGA...CTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CAA 90 bp TTCTCTAAAAACCTGTTCAACAGCATGAGGTTCATTATGTTTACACATCTCCTGATCTGTGGCTCTGGCTaGGTTAAGTATTTGCATTTC +
Preference number: 5 (lower is better)
Translates to: FSKNLFNSMRFIMFTHLLICGSG*VKYLHF
Trigger: GAAATGCAAATACTTAACCAAGCCAGAGCCACAGAT...CAGGAGATGTGTAAACATAATGAACCTCATGCTGTTGAACAGGTTTTTAGAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CAA 90 bp TTCTCTAAAAACCTGTTCAACAGCATGAGGTTCATTATGTTTACACATCTCCTGCCTTGTTTGACATGGTaGCTCATTGCACTTTCGAAT +
Preference number: 5 (lower is better)
Translates to: FSKNLFNSMRFIMFTHLLPCLTW*LIALSN
Trigger: ATTCGAAAGTGCAATGAGCAACCATGTCAAACAAGG...CAGGAGATGTGTAAACATAATGAACCTCATGCTGTTGAACAGGTTTTTAGAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CAA 90 bp AGTAGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGGCCACACATAGCATTTaGAATAATCCTCACAGTCTT +
Preference number: 5 (lower is better)
Translates to: SRQYLCSSDMWICDKSMKATHSI*NNPHSL
Trigger: AAGACTGTGAGGATTATTCAAAATGCTATGTGTGGC...CTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CAA 90 bp TATCACACGAAGATTGACCTGCACACTCAGACTCTTGTGTTGGAAAAGGTTAAAACTCAGACTCTTGTGTaGGAAAAGGTTAAATACACA +
Preference number: 5 (lower is better)
Translates to: YHTKIDLHTQTLVLEKVKTQTLV*EKVKYT
Trigger: TGTGTATTTAACCTTTTCCAACACAAGAGTCTGAGT...TTTAACCTTTTCCAACACAAGAGTCTGAGTGTGCAGGTCAATCTTCGTGTGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502709.1
ENST00000505791.5
CDS-3UTR CAA 90 bp TTGACCTGCACACTCAGACTCTTGTGTTGGAAAAGGTTAAATACACATGTCTTCACTCAGACTCTTGTGTaGGAAAAGGTTAAATACACA +
Preference number: 5 (lower is better)
Translates to: LTCTLRLLCWKRLNTHVFTQTLV*EKVKYT
Trigger: TGTGTATTTAACCTTTTCCAACACAAGAGTCTGAGT...GAAGACATGTGTATTTAACCTTTTCCAACACAAGAGTCTGAGTGTGCAGGTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502709.1
ENST00000505791.5
CDS-3UTR CAA 90 bp ATTGACCTGCACACTCAGACTCTTGTGTTGGAAAAGGTTAAATACACATGTCTTAATATGAAGTCCTCATaGAGCTGTATAAATCCCATC +
Preference number: 5 (lower is better)
Translates to: IDLHTQTLVLEKVKYTCLNMKSS*SCINPI
Trigger: GATGGGATTTATACAGCTCAATGAGGACTTCATATT...AAGACATGTGTATTTAACCTTTTCCAACACAAGAGTCTGAGTGTGCAGGTCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502709.1
ENST00000505791.5
CDS-3UTR CAA 90 bp AGTAGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGACTCAGACTCTTGTGTaGGAAAAGGTTAAATACCAT +
Preference number: 5 (lower is better)
Translates to: SRQYLCSSDMWICDKSMKTQTLV*EKVKYH
Trigger: ATGGTATTTAACCTTTTCCAACACAAGAGTCTGAGT...CTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CAA 90 bp AGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATCACAATGATCTTCTCTaGCAAGAGACCCTAATAAAC +
Preference number: 5 (lower is better)
Translates to: RQYLCSSDMWICDKSMKNHNDLL*QETLIN
Trigger: GTTTATTAGGGTCTCTTGCAAGAGAAGATCATTGTG...ATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CAA 90 bp TTCTCTAAAAACCTGTTCAACAGCATGAGGTTCATTATGTTTACACATCTCCTGTTGCATGATTTTCCATaGCCATTGCATACACCACAA +
Preference number: 5 (lower is better)
Translates to: FSKNLFNSMRFIMFTHLLLHDFP*PLHTPQ
Trigger: TTGTGGTGTATGCAATGGCAATGGAAAATCATGCAA...CAGGAGATGTGTAAACATAATGAACCTCATGCTGTTGAACAGGTTTTTAGAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CAA 90 bp TTCTCTAAAAACCTGTTCAACAGCATGAGGTTCATTATGTTTACACATCTCCTGCAAGTCTATGAAGAATaGTCTCTCAGTGGGAAGTTT +
Preference number: 5 (lower is better)
Translates to: FSKNLFNSMRFIMFTHLLQVYEE*SLSGKF
Trigger: AAACTTCCCACTGAGAGACAATTCTTCATAGACTTG...CAGGAGATGTGTAAACATAATGAACCTCATGCTGTTGAACAGGTTTTTAGAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CAA 90 bp AGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATAATATGAAGTCCTCATaGAGCTGTATAAATCCCATC +
Preference number: 5 (lower is better)
Translates to: RQYLCSSDMWICDKSMKNNMKSS*SCINPI
Trigger: GATGGGATTTATACAGCTCAATGAGGACTTCATATT...ATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CAA 90 bp AGACAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATATGGCCATTGTATCATaGAGTGGCTCAATAAATATG +
Preference number: 5 (lower is better)
Translates to: RQYLCSSDMWICDKSMKNMAIVS*SGSINM
Trigger: CATATTTATTGAGCCACTCAATGATACAATGGCCAT...ATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTGTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS-3UTR CAA 90 bp CAGTACCTTTGTTCATCAGACATGTGGATATGTGACAAGTCTATGAAGAATTGTGCAAGATTCAAGCCATaGTCTTCAGCAATAATACAT +
Preference number: 5 (lower is better)
Translates to: QYLCSSDMWICDKSMKNCARFKP*SSAIIH
Trigger: ATGTATTATTGCTGAAGACAATGGCTTGAATCTTGC...ACAATTCTTCATAGACTTGTCACATATCCACATGTCTGATGAACAAAGGTACTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS TCA 72 bp ACCCTCCGACGGCGGCGGGGGCCGGAGCCGGGACTCTaGTCGGCCCTCCACGGGCTCCTCCAAAGGCACCGG +
Preference number: 6 (lower is better)
Translates to: TLRRRRGPEPGL*SALHGLLQRHR
Trigger: CCGGTGCCTTTGGAGGAGCCCGTGGAGGGCCGATCAGAGTCCCGGCTCCGGCCCCCGCCGCCGTCGGAGGGT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS GCA 72 bp TGTGAGTCAGGCGCATCTCGCGGTTCTTCCCCATACTaGGCTCCCGCGGCCGCGGCTTCTCGCCCGGCGCAC +
Preference number: 6 (lower is better)
Translates to: CESGASRGSSPY*APAAAASRPAH
Trigger: GTGCGCCGGGCGAGAAGCCGCGGCCGCGGGAGCGCAGTATGGGGAAGAACCGCGAGATGCGCCTGACTCACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274487.9
ENST00000505791.5
CDS GCA 72 bp AGGGTGCCGCAGCACAGCTCCGGTGTAGAAGCAGCCTaGGTCTGGTGGCGCGGGAGGTTGCGGGGCGGATGC +
Preference number: 6 (lower is better)
Translates to: RVPQHSSGVEAA*VWWRGRLRGGC
Trigger: GCATCCGCCCCGCAACCTCCCGCGCCACCAGACGCAGGCTGCTTCTACACCGGAGCTGTGCTGCGGCACCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS TCA 72 bp CAGAATCTAGCCCAGGACATTTGCGCTCTCGACTGCTaGTCCCAGCACTGCAGGTTCGGCTACAAGGACTCC +
Preference number: 6 (lower is better)
Translates to: QNLAQDICALDC*SQHCRFGYKDS
Trigger: GGAGTCCTTGTAGCCGAACCTGCAGTGCTGGGATCAGCAGTCGAGAGCGCAAATGTCCTGGGCTAGATTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS TCA 72 bp CTCGGCAGTACACTGGCCACTGATCTCCCAGGCACTTaGAAGTCAGAGCAGCCAGTCTGGGTGATGTTATGG +
Preference number: 6 (lower is better)
Translates to: LGSTLATDLPGT*KSEQPVWVMLW
Trigger: CCATAACATCACCCAGACTGGCTGCTCTGACTTTCAAGTGCCTGGGAGATCAGTGGCCAGTGTACTGCCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS CCA 72 bp ACTCTCCGGCCAGATGTTCAGGTGCTGAGGTCCTGCTaGTACATTCTCCAGCCTTACACCACTTACCAAGGT +
Preference number: 6 (lower is better)
Translates to: TLRPDVQVLRSC*YILQPYTTYQG
Trigger: ACCTTGGTAAGTGGTGTAAGGCTGGAGAATGTACCAGCAGGACCTCAGCACCTGAACATCTGGCCGGAGAGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS CAA 90 bp TTGGGCCCAATGCAGTCCCTCTCTCGGGCTCTAATCAGTGTTCCATaGCTCAGTTGTTGGGTACAGGCCACTTGTCTGCTCTGCATTCCT +
Preference number: 6 (lower is better)
Translates to: LGPMQSLSRALISVP*LSCWVQATCLLCIP
Trigger: AGGAATGCAGAGCAGACAAGTGGCCTGTACCCAACAACTGAGCAATGGAACACTGATTAGAGCCCGAGAGAGGGACTGCATTGGGCCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274487.9
ENST00000509467.1
CDS CAA 72 bp CCTCTCTCGGGCTCTAATCAGTGTTCCATTGCTCAGTaGTTGGGTACAGGCCACTTGTCTGCTCTGCATTCC +
Preference number: 6 (lower is better)
Translates to: PLSGSNQCSIAQ*LGTGHLSALHS
Trigger: GGAATGCAGAGCAGACAAGTGGCCTGTACCCAACAACTGAGCAATGGAACACTGATTAGAGCCCGAGAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274487.9
ENST00000509467.1
CDS CAA 90 bp GCAGTCCCTCTCTCGGGCTCTAATCAGTGTTCCATTGCTCAGTTGTaGGGTACAGGCCACTTGTCTGCTCTGCATTCCTTTTCCACAAGT +
Preference number: 6 (lower is better)
Translates to: AVPLSGSNQCSIAQL*GTGHLSALHSFSTS
Trigger: ACTTGTGGAAAAGGAATGCAGAGCAGACAAGTGGCCTGTACCCAACAACTGAGCAATGGAACACTGATTAGAGCCCGAGAGAGGGACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274487.9
ENST00000509467.1
CDS CAA 90 bp AATGCAGTCCCTCTCTCGGGCTCTAATCAGTGTTCCATTGCTCAGTaGTTGGGTACAGGCCACTTGTCTGCTCTGCATTCCTTTTCCACA +
Preference number: 6 (lower is better)
Translates to: NAVPLSGSNQCSIAQ*LGTGHLSALHSFST
Trigger: TGTGGAAAAGGAATGCAGAGCAGACAAGTGGCCTGTACCCAACAACTGAGCAATGGAACACTGATTAGAGCCCGAGAGAGGGACTGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274487.9
ENST00000509467.1
CDS GCA 72 bp TTGCTCAGTTGTTGGGTACAGGCCACTTGTCTGCTCTaGATTCCTTTTCCACAAGTTCGTGAACAAGGGGTC +
Preference number: 6 (lower is better)
Translates to: LLSCWVQATCLL*IPFPQVREQGV
Trigger: GACCCCTTGTTCACGAACTTGTGGAAAAGGAATGCAGAGCAGACAAGTGGCCTGTACCCAACAACTGAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274487.9
ENST00000509467.1
CDS CCA 72 bp GTCCACATGAAGAGGGGCTCAGGTGCTTTAGAGCTCTaGTTTTCTGGAAGAGGGTCTGATGGGATAGTGTAT +
Preference number: 6 (lower is better)
Translates to: VHMKRGSGALEL*FSGRGSDGIVY
Trigger: ATACACTATCCCATCAGACCCTCTTCCAGAAAACCAGAGCTCTAAAGCACCTGAGCCCCTCTTCATGTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS CAA 72 bp CATTGTTCATCAGCAGTGTATGTCATCCCTGGCAGCTaGGAGGGAACCATCACAGAATTGACACTCTGCGGA +
Preference number: 6 (lower is better)
Translates to: HCSSAVYVIPGS*EGTITELTLCG
Trigger: TCCGCAGAGTGTCAATTCTGTGATGGTTCCCTCCAAGCTGCCAGGGATGACATACACTGCTGATGAACAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS CAA 72 bp CTCTCGGGCTCTAATCAGTGTTCCATTGCTCAGTTGTaGGGTACAGGCCACTTGTCTGCTCTGCATTCCTTT +
Preference number: 6 (lower is better)
Translates to: LSGSNQCSIAQL*GTGHLSALHSF
Trigger: AAAGGAATGCAGAGCAGACAAGTGGCCTGTACCCAACAACTGAGCAATGGAACACTGATTAGAGCCCGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274487.9
ENST00000509467.1
CDS CAA 90 bp GCAGTGTATGTCATCCCTGGCAGCTTGGAGGGAACCATCACAGAATaGACACTCTGCGGATTTGTTTGTAGCAAGCAGTTACTGGCCTTT +
Preference number: 6 (lower is better)
Translates to: AVYVIPGSLEGTITE*TLCGFVCSKQLLAF
Trigger: AAAGGCCAGTAACTGCTTGCTACAAACAAATCCGCAGAGTGTCAATTCTGTGATGGTTCCCTCCAAGCTGCCAGGGATGACATACACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS CAA 90 bp CTCCAGCCTTACACCACTTACCAAGGTCACAGTCAGTTCCATCCATaGGTGGGTCTAGCTTGGTTCTGCATTCTTTCTCACCTTCTACCT +
Preference number: 6 (lower is better)
Translates to: LQPYTTYQGHSQFHP*VGLAWFCILSHLLP
Trigger: AGGTAGAAGGTGAGAAAGAATGCAGAACCAAGCTAGACCCACCAATGGATGGAACTGACTGTGACCTTGGTAAGTGGTGTAAGGCTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS TCA 72 bp TCATCCCTGGCAGCTTGGAGGGAACCATCACAGAATTaGCACTCTGCGGATTTGTTTGTAGCAAGCAGTTAC +
Preference number: 6 (lower is better)
Translates to: SSLAAWREPSQN*HSADLFVASSY
Trigger: GTAACTGCTTGCTACAAACAAATCCGCAGAGTGTCAATTCTGTGATGGTTCCCTCCAAGCTGCCAGGGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS GCA 72 bp GGCAGCTTGGAGGGAACCATCACAGAATTGACACTCTaGGGATTTGTTTGTAGCAAGCAGTTACTGGCCTTT +
Preference number: 6 (lower is better)
Translates to: GSLEGTITELTL*GFVCSKQLLAF
Trigger: AAAGGCCAGTAACTGCTTGCTACAAACAAATCCGCAGAGTGTCAATTCTGTGATGGTTCCCTCCAAGCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS CCA 72 bp GATCTGGCATTGTTCATCAGCAGTGTATGTCATCCCTaGCAGCTTGGAGGGAACCATCACAGAATTGACACT +
Preference number: 6 (lower is better)
Translates to: DLALFISSVCHP*QLGGNHHRIDT
Trigger: AGTGTCAATTCTGTGATGGTTCCCTCCAAGCTGCCAGGGATGACATACACTGCTGATGAACAATGCCAGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS CAA 72 bp GTCATCCCTGGCAGCTTGGAGGGAACCATCACAGAATaGACACTCTGCGGATTTGTTTGTAGCAAGCAGTTA +
Preference number: 6 (lower is better)
Translates to: VIPGSLEGTITE*TLCGFVCSKQL
Trigger: TAACTGCTTGCTACAAACAAATCCGCAGAGTGTCAATTCTGTGATGGTTCCCTCCAAGCTGCCAGGGATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS CAA 72 bp CTTTGGGGAGGAAGTTCTAACACTATAAGCCTGACATaGCCAGTCTCTGAATCCAGGCAAACCTGCAGGACA +
Preference number: 6 (lower is better)
Translates to: LWGGSSNTISLT*PVSESRQTCRT
Trigger: TGTCCTGCAGGTTTGCCTGGATTCAGAGACTGGCAATGTCAGGCTTATAGTGTTAGAACTTCCTCCCCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS CAA 90 bp AGGATCTGGCATTGTTCATCAGCAGTGTATGTCATCCCTGGCAGCTaGGAGGGAACCATCACAGAATTGACACTCTGCGGATTTGTTTGT +
Preference number: 6 (lower is better)
Translates to: RIWHCSSAVYVIPGS*EGTITELTLCGFVC
Trigger: ACAAACAAATCCGCAGAGTGTCAATTCTGTGATGGTTCCCTCCAAGCTGCCAGGGATGACATACACTGCTGATGAACAATGCCAGATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS TCA 72 bp CACTTGTCTGCTCTGCATTCCTTTTCCACAAGTTCGTaGACAAGGGGTCCATTCTGTCATCATCCACCTTGT +
Preference number: 6 (lower is better)
Translates to: HLSALHSFSTSS*TRGPFCHHPPC
Trigger: ACAAGGTGGATGATGACAGAATGGACCCCTTGTTCACGAACTTGTGGAAAAGGAATGCAGAGCAGACAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274487.9
ENST00000509467.1
CDS TCA 72 bp CACTTCTTTCTTGGGTTGGTACATCTAACGGTCCGATaGCGTATGCCTTTGCCACACTTGACTGAACACTCA +
Preference number: 6 (lower is better)
Translates to: HFFLGLVHLTVR*RMPLPHLTEHS
Trigger: TGAGTGTTCAGTCAAGTGTGGCAAAGGCATACGTCATCGGACCGTTAGATGTACCAACCCAAGAAAGAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274487.9
ENST00000509467.1
CDS GCA 72 bp AGCCTGACATTGCCAGTCTCTGAATCCAGGCAAACCTaGAGGACAAGGTGGATTCTCACATATTCTGTATTG +
Preference number: 6 (lower is better)
Translates to: SLTLPVSESRQT*RTRWILTYSVL
Trigger: CAATACAGAATATGTGAGAATCCACCTTGTCCTGCAGGTTTGCCTGGATTCAGAGACTGGCAATGTCAGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS GCA 72 bp TTCCATTGCTCAGTTGTTGGGTACAGGCCACTTGTCTaGTCTGCATTCCTTTTCCACAAGTTCGTGAACAAG +
Preference number: 6 (lower is better)
Translates to: FHCSVVGYRPLV*SAFLFHKFVNK
Trigger: CTTGTTCACGAACTTGTGGAAAAGGAATGCAGAGCAGACAAGTGGCCTGTACCCAACAACTGAGCAATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274487.9
ENST00000509467.1
CDS CAA 72 bp TACACCACTTACCAAGGTCACAGTCAGTTCCATCCATaGGTGGGTCTAGCTTGGTTCTGCATTCTTTCTCAC +
Preference number: 6 (lower is better)
Translates to: YTTYQGHSQFHP*VGLAWFCILSH
Trigger: GTGAGAAAGAATGCAGAACCAAGCTAGACCCACCAATGGATGGAACTGACTGTGACCTTGGTAAGTGGTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS CAA 72 bp TTATGCATGCATTGGATTACACGGGACTGCATTCCTTaGCCACAGGTAATTGAGCACTTAGACCAGTCACCC +
Preference number: 6 (lower is better)
Translates to: LCMHWITRDCIP*PQVIEHLDQSP
Trigger: GGGTGACTGGTCTAAGTGCTCAATTACCTGTGGCAAAGGAATGCAGTCCCGTGTAATCCAATGCATGCATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274487.9
ENST00000509467.1
CDS CAA 90 bp AAGTATATGCTTTGGGGAGGAAGTTCTAACACTATAAGCCTGACATaGCCAGTCTCTGAATCCAGGCAAACCTGCAGGACAAGGTGGATT +
Preference number: 6 (lower is better)
Translates to: KYMLWGGSSNTISLT*PVSESRQTCRTRWI
Trigger: AATCCACCTTGTCCTGCAGGTTTGCCTGGATTCAGAGACTGGCAATGTCAGGCTTATAGTGTTAGAACTTCCTCCCCAAAGCATATACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS GCA 72 bp CTGTCATCATCCACCTTGTTTGACATGGTTGCTCATTaGACTTTCGAATCTGTGGCTCTGGCTTGGTTAAGT +
Preference number: 6 (lower is better)
Translates to: LSSSTLFDMVAH*TFESVALAWLS
Trigger: ACTTAACCAAGCCAGAGCCACAGATTCGAAAGTGCAATGAGCAACCATGTCAAACAAGGTGGATGATGACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274487.9
ENST00000509467.1
CDS CCA 72 bp TTCACCAGACATGATATGAAGACCATCAGCACACGATaGGTGGTCATTGTCATGGTTAATGCCCATGTTGTG +
Preference number: 6 (lower is better)
Translates to: FTRHDMKTISTR*VVIVMVNAHVV
Trigger: CACAACATGGGCATTAACCATGACAATGACCACCCATCGTGTGCTGATGGTCTTCATATCATGTCTGGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS TCA 72 bp GCACATGGTTTTTCTTCATCCAGGACAGCTTGCCACTaGAGTATATGCTTTGGGGAGGAAGTTCTAACACTA +
Preference number: 6 (lower is better)
Translates to: AHGFSSSRTACH*SICFGEEVLTL
Trigger: TAGTGTTAGAACTTCCTCCCCAAAGCATATACTTCAGTGGCAAGCTGTCCTGGATGAAGAAAAACCATGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS CAA 72 bp TTCATTTCCATGTCTTCCTGTGATCTTATGCATGCATaGGATTACACGGGACTGCATTCCTTTGCCACAGGT +
Preference number: 6 (lower is better)
Translates to: FISMSSCDLMHA*DYTGLHSFATG
Trigger: ACCTGTGGCAAAGGAATGCAGTCCCGTGTAATCCAATGCATGCATAAGATCACAGGAAGACATGGAAATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274487.9
ENST00000509467.1
CDS CAA 90 bp TGCATGATTTTCCATTGCCATTGCATACACCACAATGATCTTCTCTaGCAAGAGACCCTAATAAACCATCACAGCCAACTTTCTGGCACC +
Preference number: 6 (lower is better)
Translates to: CMIFHCHCIHHNDLL*QETLINHHSQLSGT
Trigger: GGTGCCAGAAAGTTGGCTGTGATGGTTTATTAGGGTCTCTTGCAAGAGAAGATCATTGTGGTGTATGCAATGGCAATGGAAAATCATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS CCA 72 bp AATAACATGCTGCATCTCCTGACAAAAAGAAGCCAATaGCCCAAAAAGGATCTGGCATTGTTCATCAGCAGT +
Preference number: 6 (lower is better)
Translates to: NNMLHLLTKRSQ*PKKDLALFISS
Trigger: ACTGCTGATGAACAATGCCAGATCCTTTTTGGGCCATTGGCTTCTTTTTGTCAGGAGATGCAGCATGTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS CAA 72 bp TCTAGCTTGGTTCTGCATTCTTTCTCACCTTCTACCTaGCACCATAATCCTGTGCAAATAACATGCTGCATC +
Preference number: 6 (lower is better)
Translates to: SSLVLHSFSPST*HHNPVQITCCI
Trigger: GATGCAGCATGTTATTTGCACAGGATTATGGTGCAAGGTAGAAGGTGAGAAAGAATGCAGAACCAAGCTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS CAA 72 bp ATATTCTGTATTGTTTTCTGGGACCATTACAATCCCTaGCTTCAGAATCTAGCCCAGGACATTTGCGCTCTC +
Preference number: 6 (lower is better)
Translates to: IFCIVFWDHYNP*LQNLAQDICAL
Trigger: GAGAGCGCAAATGTCCTGGGCTAGATTCTGAAGCAAGGGATTGTAATGGTCCCAGAAAACAATACAGAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS CAA 90 bp TCTGGTGGAGTTTCATGGAGCAGAATAAGCTTTATCACACGAAGATaGACCTGCACACTCAGACTCTTGTGTTGGAAAAGGTTAAATACC +
Preference number: 6 (lower is better)
Translates to: SGGVSWSRISFITRR*TCTLRLLCWKRLNT
Trigger: GGTATTTAACCTTTTCCAACACAAGAGTCTGAGTGTGCAGGTCAATCTTCGTGTGATAAAGCTTATTCTGCTCCATGAAACTCCACCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS CAA 90 bp AAGCAGTTACTGGCCTTTGACCTGAGAAATCTTTCCAAATCTTCCTaGCTACATCGAGACCATGAAACGTCACCAAGATTCTGTCCTTTA +
Preference number: 6 (lower is better)
Translates to: KQLLAFDLRNLSKSS*LHRDHETSPRFCPL
Trigger: TAAAGGACAGAATCTTGGTGACGTTTCATGGTCTCGATGTAGCAAGGAAGATTTGGAAAGATTTCTCAGGTCAAAGGCCAGTAACTGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS CCA 72 bp GACAAGGTGGATTCTCACATATTCTGTATTGTTTTCTaGGACCATTACAATCCCTTGCTTCAGAATCTAGCC +
Preference number: 6 (lower is better)
Translates to: DKVDSHIFCIVF*DHYNPLLQNLA
Trigger: GGCTAGATTCTGAAGCAAGGGATTGTAATGGTCCCAGAAAACAATACAGAATATGTGAGAATCCACCTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS TCA 72 bp TTTCTGAGGAAAAACATTCATTTCCATGTCTTCCTGTaGTCTTATGCATGCATTGGATTACACGGGACTGCA +
Preference number: 6 (lower is better)
Translates to: FLRKNIHFHVFL*SYACIGLHGTA
Trigger: TGCAGTCCCGTGTAATCCAATGCATGCATAAGATCACAGGAAGACATGGAAATGAATGTTTTTCCTCAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274487.9
ENST00000509467.1
CDS GCA 72 bp GAAAAACATTCATTTCCATGTCTTCCTGTGATCTTATaGATGCATTGGATTACACGGGACTGCATTCCTTTG +
Preference number: 6 (lower is better)
Translates to: EKHSFPCLPVIL*MHWITRDCIPL
Trigger: CAAAGGAATGCAGTCCCGTGTAATCCAATGCATGCATAAGATCACAGGAAGACATGGAAATGAATGTTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274487.9
ENST00000509467.1
CDS TCA 72 bp AAATCTTTCCAAATCTTCCTTGCTACATCGAGACCATaGAACGTCACCAAGATTCTGTCCTTTAATCCATTC +
Preference number: 6 (lower is better)
Translates to: KSFQIFLATSRP*NVTKILSFNPF
Trigger: GAATGGATTAAAGGACAGAATCTTGGTGACGTTTCATGGTCTCGATGTAGCAAGGAAGATTTGGAAAGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS TCA 72 bp TTGCATGATTTTCCATTGCCATTGCATACACCACAATaGTCTTCTCTTGCAAGAGACCCTAATAAACCATCA +
Preference number: 6 (lower is better)
Translates to: LHDFPLPLHTPQ*SSLARDPNKPS
Trigger: TGATGGTTTATTAGGGTCTCTTGCAAGAGAAGATCATTGTGGTGTATGCAATGGCAATGGAAAATCATGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274487.9
CDS CAA 72 bp TTTATCACACGAAGATTGACCTGCACACTCAGACTCTaGTGTTGGAAAAGGTTAAATACCATATTTAAGATG +
Preference number: 6 (lower is better)
Translates to: FITRRLTCTLRL*CWKRLNTIFKM
Trigger: CATCTTAAATATGGTATTTAACCTTTTCCAACACAAGAGTCTGAGTGTGCAGGTCAATCTTCGTGTGATAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274487.9