RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADAMTS17 (Homo sapiens)

Ensembl gene IDs: ENSG00000140470

Ensembl transcript IDs: ENST00000268070.9, ENST00000378898.8, ENST00000557896.1, ENST00000558960.1, ENST00000559976.1, ENST00000560486.2, ENST00000561355.2, ENST00000568565.2

Found 558 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATGGGAGTCTGCTGGTGGCCAGGCCTGAAGGGGAGGACAGCAGTCTaGGCAGGCCGCGGGGCGAGGGTGGGCCGCTCCATCCTGACACCC +
Preference number: 1 (lower is better)
Translates to: MGVCWWPGLKGRTAV*AGRGARVGRSILTP
Trigger: GGGTGTCAGGATGGAGCGGCCCACCCTCGCCCCGCGGCCTGCGCAGACTGCTGTCCTCCCCTTCAGGCCTGGCCACCAGCAGACTCCCAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR TCA 90 bp CAGCAGTCTGCGCAGGCCGCGGGGCGAGGGTGGGCCGCTCCATCCTaGCACCCTCGGTTCTTTCCACAGAGCACCCACGGAAGTTTCTCA +
Preference number: 1 (lower is better)
Translates to: QQSAQAAGRGWAAPS*HPRFFPQSTHGSFS
Trigger: TGAGAAACTTCCGTGGGTGCTCTGTGGAAAGAACCGAGGGTGTCAGGATGGAGCGGCCCACCCTCGCCCCGCGGCCTGCGCAGACTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR CCA 90 bp GCCGGGTGGGGGCGTGGCCACAAGGCTGGTAGGCTTGCGGGTGGGTaGGTTTCAGACCTGAGTCTGAGCTTTGAGCGACCCTTGGGACTG +
Preference number: 1 (lower is better)
Translates to: AGWGRGHKAGRLAGG*VSDLSLSFERPLGL
Trigger: CAGTCCCAAGGGTCGCTCAAAGCTCAGACTCAGGTCTGAAACCCACCCACCCGCAAGCCTACCAGCCTTGTGGCCACGCCCCCACCCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR CCA 90 bp GCTCGGCGGGTGTGCAGCAGTGCCAGCCAGATGGCGTTCCTCCCCTaGTCCTGGCACATCAGGCTGCTCCGTGCCAGGATAGAGCAGTCA +
Preference number: 1 (lower is better)
Translates to: ARRVCSSASQMAFLP*SWHIRLLRARIEQS
Trigger: TGACTGCTCTATCCTGGCACGGAGCAGCCTGATGTGCCAGGACCAGGGGAGGAACGCCATCTGGCTGGCACTGCTGCACACCCGCCGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR GCA 90 bp CCACAAAGTCTGGGGCTACAGGAAGGCTCGGCGGGTGTGCAGCAGTaGCAGCCAGATGGCGTTCCTCCCCTGGTCCTGGCACATCAGGCT +
Preference number: 1 (lower is better)
Translates to: PQSLGLQEGSAGVQQ*QPDGVPPLVLAHQA
Trigger: AGCCTGATGTGCCAGGACCAGGGGAGGAACGCCATCTGGCTGGCACTGCTGCACACCCGCCGAGCCTTCCTGTAGCCCCAGACTTTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR CCA 90 bp CGGGTGTGCAGCAGTGCCAGCCAGATGGCGTTCCTCCCCTGGTCCTaGCACATCAGGCTGCTCCGTGCCAGGATAGAGCAGTCAGGCCTT +
Preference number: 1 (lower is better)
Translates to: RVCSSASQMAFLPWS*HIRLLRARIEQSGL
Trigger: AAGGCCTGACTGCTCTATCCTGGCACGGAGCAGCCTGATGTGCCAGGACCAGGGGAGGAACGCCATCTGGCTGGCACTGCTGCACACCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR GCA 90 bp CCCGGCCCTCCCCAGAGAAGCCACGGGCAGAGGCTCACCAACACCTaGCCCTCCCTCCATGGTGTCGCCGGCTTTCAGAATAAAGCCTTT +
Preference number: 1 (lower is better)
Translates to: PGPPQRSHGQRLTNT*PSLHGVAGFQNKAF
Trigger: AAAGGCTTTATTCTGAAAGCCGGCGACACCATGGAGGGAGGGGCAGGTGTTGGTGAGCCTCTGCCCGTGGCTTCTCTGGGGAGGGCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR GCA 90 bp AATGGGTACCACAAAGTCTGGGGCTACAGGAAGGCTCGGCGGGTGTaGAGCAGTGCCAGCCAGATGGCGTTCCTCCCCTGGTCCTGGCAC +
Preference number: 1 (lower is better)
Translates to: NGYHKVWGYRKARRV*SSASQMAFLPWSWH
Trigger: GTGCCAGGACCAGGGGAGGAACGCCATCTGGCTGGCACTGCTGCACACCCGCCGAGCCTTCCTGTAGCCCCAGACTTTGTGGTACCCATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR CCA 90 bp GTCCACGCTCATGTTCTATGTAGTTGGATTCTTGTGGCAGCCGGGTaGGGGCGTGGCCACAAGGCTGGTAGGCTTGCGGGTGGGTGGGTT +
Preference number: 1 (lower is better)
Translates to: VHAHVLCSWILVAAG*GRGHKAGRLAGGWV
Trigger: AACCCACCCACCCGCAAGCCTACCAGCCTTGTGGCCACGCCCCCACCCGGCTGCCACAAGAATCCAACTACATAGAACATGAGCGTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR CCA 90 bp GGCATGGAGGCAACGTCCTGGTTCTCATGTGGTCAAGAAGGTAGATaGAGAGAAACGTGTGCTAAGCAGCCCGGCCCTCCCCAGAGAAGC +
Preference number: 1 (lower is better)
Translates to: GMEATSWFSCGQEGR*RETCAKQPGPPQRS
Trigger: GCTTCTCTGGGGAGGGCCGGGCTGCTTAGCACACGTTTCTCTCCATCTACCTTCTTGACCACATGAGAACCAGGACGTTGCCTCCATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR CCA 90 bp TGGGTCAATGATGACAGGCGTGATGATAATGGGTACCACAAAGTCTaGGGCTACAGGAAGGCTCGGCGGGTGTGCAGCAGTGCCAGCCAG +
Preference number: 1 (lower is better)
Translates to: WVNDDRRDDNGYHKV*GYRKARRVCSSASQ
Trigger: CTGGCTGGCACTGCTGCACACCCGCCGAGCCTTCCTGTAGCCCCAGACTTTGTGGTACCCATTATCATCACGCCTGTCATCATTGACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR CCA 90 bp AGCACTAATGGCAAACGCCAAGTCCACGCTCATGTTCTATGTAGTTaGATTCTTGTGGCAGCCGGGTGGGGGCGTGGCCACAAGGCTGGT +
Preference number: 1 (lower is better)
Translates to: STNGKRQVHAHVLCS*ILVAAGWGRGHKAG
Trigger: ACCAGCCTTGTGGCCACGCCCCCACCCGGCTGCCACAAGAATCCAACTACATAGAACATGAGCGTGGACTTGGCGTTTGCCATTAGTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR TCA 90 bp CACAGCTCTGACACCAAAGCCTTCTCTAGGCCCAATGCCCACAGTTaGTGCACACCAATGTCCAAAGCTGGGCTGAAGAGCCCCATACCC +
Preference number: 1 (lower is better)
Translates to: HSSDTKAFSRPNAHS*CTPMSKAGLKSPIP
Trigger: GGGTATGGGGCTCTTCAGCCCAGCTTTGGACATTGGTGTGCATCAACTGTGGGCATTGGGCCTAGAGAAGGCTTTGGTGTCAGAGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561355.2
3UTR GCA 90 bp GGCAGGTGCCCATCCGCCCCAGTGAAGCTGGCCCAAGCTTACCTTTaGCTTAGGAAGCAACCCCATCACCGCAATTACCGTTTCTTATGT +
Preference number: 1 (lower is better)
Translates to: GRCPSAPVKLAQAYL*LRKQPHHRNYRFLC
Trigger: ACATAAGAAACGGTAATTGCGGTGATGGGGTTGCTTCCTAAGGCAAAGGTAAGCTTGGGCCAGCTTCACTGGGGCGGATGGGCACCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR GCA 90 bp ACTGGGATGTGGTACAGCATCTCTAAGGTACAAAGCTTTAGGAAGTaGAGGCCAGAGTGGATGTTCCCGGAAGGCGGGGCAGGTGCCCAT +
Preference number: 1 (lower is better)
Translates to: TGMWYSISKVQSFRK*RPEWMFPEGGAGAH
Trigger: ATGGGCACCTGCCCCGCCTTCCGGGAACATCCACTCTGGCCTGCACTTCCTAAAGCTTTGTACCTTAGAGATGCTGTACCACATCCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR GCA 90 bp ATTTCTGAGGCTGATCCTCAAAGGCAGCACAGCTCCTGCTGGGCTTaGGGGAACTCTTGCATTGGGAGCCCTGGTGGCCATAGAAGAAGT +
Preference number: 1 (lower is better)
Translates to: ISEADPQRQHSSCWA*GNSCIGSPGGHRRS
Trigger: ACTTCTTCTATGGCCACCAGGGCTCCCAATGCAAGAGTTCCCGCAAGCCCAGCAGGAGCTGTGCTGCCTTTGAGGATCAGCCTCAGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561355.2
3UTR CCA 90 bp GGGTATCTGACAATAACCCAATCAATCCTTTTCATTCTGAGGGTGTaGGGCCCTTGCCAGGGTGACAGTGGGCATATCTGGAGGCCCCGG +
Preference number: 1 (lower is better)
Translates to: GYLTITQSILFILRV*GPCQGDSGHIWRPR
Trigger: CCGGGGCCTCCAGATATGCCCACTGTCACCCTGGCAAGGGCCCCACACCCTCAGAATGAAAAGGATTGATTGGGTTATTGTCAGATACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR CCA 90 bp AGCTGGGCTGAAGAGCCCCATACCCGGTATGCTGTCTCTGAACTATaGAATATGCTCTCTCCTCGAGCTGTCTCTGATCCCTCTGCACAG +
Preference number: 1 (lower is better)
Translates to: SWAEEPHTRYAVSEL*NMLSPRAVSDPSAQ
Trigger: CTGTGCAGAGGGATCAGAGACAGCTCGAGGAGAGAGCATATTCCATAGTTCAGAGACAGCATACCGGGTATGGGGCTCTTCAGCCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561355.2
3UTR GCA 90 bp TTAGATGCTTCCCCAAACCCAGACTCTCTTGGAACATTCTTCCCATaGGGGTGGTATGAACTGCGTGGCACTGCTGTCCTCGCTGGCATA +
Preference number: 1 (lower is better)
Translates to: LDASPNPDSLGTFFP*GWYELRGTAVLAGI
Trigger: TATGCCAGCGAGGACAGCAGTGCCACGCAGTTCATACCACCCGCATGGGAAGAATGTTCCAAGAGAGTCTGGGTTTGGGGAAGCATCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR GCA 90 bp CTGAAGAGCCCCATACCCGGTATGCTGTCTCTGAACTATGGAATATaGTCTCTCCTCGAGCTGTCTCTGATCCCTCTGCACAGTAGCCCT +
Preference number: 1 (lower is better)
Translates to: LKSPIPGMLSLNYGI*SLLELSLIPLHSSP
Trigger: AGGGCTACTGTGCAGAGGGATCAGAGACAGCTCGAGGAGAGAGCATATTCCATAGTTCAGAGACAGCATACCGGGTATGGGGCTCTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561355.2
3UTR CCA 90 bp GCTTCCCCAAACCCAGACTCTCTTGGAACATTCTTCCCATGCGGGTaGTATGAACTGCGTGGCACTGCTGTCCTCGCTGGCATATATAGA +
Preference number: 1 (lower is better)
Translates to: ASPNPDSLGTFFPCG*YELRGTAVLAGIYR
Trigger: TCTATATATGCCAGCGAGGACAGCAGTGCCACGCAGTTCATACCACCCGCATGGGAAGAATGTTCCAAGAGAGTCTGGGTTTGGGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR GCA 90 bp ACCCAGACTCTCTTGGAACATTCTTCCCATGCGGGTGGTATGAACTaGGTGGCACTGCTGTCCTCGCTGGCATATATAGATTTACACTCC +
Preference number: 1 (lower is better)
Translates to: TQTLLEHSSHAGGMN*VALLSSLAYIDLHS
Trigger: GGAGTGTAAATCTATATATGCCAGCGAGGACAGCAGTGCCACGCAGTTCATACCACCCGCATGGGAAGAATGTTCCAAGAGAGTCTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR CCA 90 bp CTTGTGTCCTCAGAGGTCCCAAATGTCGTCTTACCTTCAGATAAATaGCCACGGTCGGTAGAAAGCCACTGGGATGTGGTACAGCATCTC +
Preference number: 1 (lower is better)
Translates to: LVSSEVPNVVLPSDK*PRSVESHWDVVQHL
Trigger: GAGATGCTGTACCACATCCCAGTGGCTTTCTACCGACCGTGGCCATTTATCTGAAGGTAAGACGACATTTGGGACCTCTGAGGACACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR GCA 90 bp CTTCTGTTTCCCTACACGGTGGACAGCAGAGCTCTGAAAATTAGATaGTTCCCCAAACCCAGACTCTCTTGGAACATTCTTCCCATGCGG +
Preference number: 1 (lower is better)
Translates to: LLFPYTVDSRALKIR*FPKPRLSWNILPMR
Trigger: CCGCATGGGAAGAATGTTCCAAGAGAGTCTGGGTTTGGGGAAGCATCTAATTTTCAGAGCTCTGCTGTCCACCGTGTAGGGAAACAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR TCA 90 bp GGAGGAGGTGTTATTTACGGTAAAGTCCTAGAACATAAGCACCCATaGAATGCCCACCAAGTTGGTGAGCAAAACAGGCCTCCTGGCATC +
Preference number: 1 (lower is better)
Translates to: GGGVIYGKVLEHKHP*NAHQVGEQNRPPGI
Trigger: GATGCCAGGAGGCCTGTTTTGCTCACCAACTTGGTGGGCATTTCATGGGTGCTTATGTTCTAGGACTTTACCGTAAATAACACCTCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR CCA 90 bp GATTTAGAGACTATGTTCTCAGAGACGGGCATGGAGGCAACGTCCTaGTTCTCATGTGGTCAAGAAGGTAGATGGAGAGAAACGTGTGCT +
Preference number: 1 (lower is better)
Translates to: DLETMFSETGMEATS*FSCGQEGRWRETCA
Trigger: AGCACACGTTTCTCTCCATCTACCTTCTTGACCACATGAGAACCAGGACGTTGCCTCCATGCCCGTCTCTGAGAACATAGTCTCTAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR CCA 90 bp AAGGACCTTCCTTCATCATGCATCATCCTTGCCCCACCAAGAAGATaGGTCAATGATGACAGGCGTGATGATAATGGGTACCACAAAGTC +
Preference number: 1 (lower is better)
Translates to: KDLPSSCIILAPPRR*VNDDRRDDNGYHKV
Trigger: GACTTTGTGGTACCCATTATCATCACGCCTGTCATCATTGACCCATCTTCTTGGTGGGGCAAGGATGATGCATGATGAAGGAAGGTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR TCA 90 bp AAAACACAGAAACACAGCACCAATAAATCAAGAAGCACAGGGAGATaGTCCCATGGAAGTCCAAGTGAGACCTTCCGTCTGAAATCAGGG +
Preference number: 1 (lower is better)
Translates to: KTQKHSTNKSRSTGR*SHGSPSETFRLKSG
Trigger: CCCTGATTTCAGACGGAAGGTCTCACTTGGACTTCCATGGGATCATCTCCCTGTGCTTCTTGATTTATTGGTGCTGTGTTTCTGTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR TCA 90 bp CTGGAAATTCAAATGTCAAAAGCGAGTCAAGACAAGAACACTAAATaGTGTCTCTCTCTTGACGGTTGTCTGCCAGAGGTGCTTCCCTTC +
Preference number: 1 (lower is better)
Translates to: LEIQMSKASQDKNTK*CLSLDGCLPEVLPF
Trigger: GAAGGGAAGCACCTCTGGCAGACAACCGTCAAGAGAGAGACATCATTTAGTGTTCTTGTCTTGACTCGCTTTTGACATTTGAATTTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR TCA 90 bp ACTCGAGGGACAGTACAGGGTATTAACACAGAAACATCACTGCTGTaGTCAGCATCTAGTGGAACAAGAATGTTTATGATGGTTTCACTG +
Preference number: 1 (lower is better)
Translates to: TRGTVQGINTETSLL*SASSGTRMFMMVSL
Trigger: CAGTGAAACCATCATAAACATTCTTGTTCCACTAGATGCTGATCACAGCAGTGATGTTTCTGTGTTAATACCCTGTACTGTCCCTCGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR-3UTR TCA 90 bp TGGGGCTACAGGAAGGCTCGGCGGGTGTGCAGCAGTGCCAGCCAGATGGCGTTCGCCCATCCGCCCCAGTaGAGCTGGCCCAAGCTTACC +
Preference number: 2 (lower is better)
Translates to: WGYRKARRVCSSASQMAFAHPPQ*SWPKLT
Trigger: GGTAAGCTTGGGCCAGCTTCACTGGGGCGGATGGGC...GAACGCCATCTGGCTGGCACTGCTGCACACCCGCCGAGCCTTCCTGTAGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR-3UTR GCA 90 bp GAGCCGGATAGCGTTCCTCCGCTCCCGCCAGTCCCGCGAAGGCCTGCCCCACGTTTTCTGTTAGAACCTTaGAGAGCTGCTCAGGTCTCT +
Preference number: 2 (lower is better)
Translates to: EPDSVPPLPPVPRRPAPRFLLEP*RAAQVS
Trigger: AGAGACCTGAGCAGCTCTGCAAGGTTCTAACAGAAA...ACGTGGGGCAGGCCTTCGCGGGACTGGCGGGAGCGGAGGAACGCTATCCGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558960.1
3UTR-3UTR CCA 90 bp CCTCAAAGGCAGCACAGCTCCTGCTGGGCTTGCGGGAACTCTTGCATTGGGAGCTCTGCCACCAAGGTATaGACGCCAAGCTGCAGAGGC +
Preference number: 2 (lower is better)
Translates to: PQRQHSSCWACGNSCIGSSATKV*TPSCRG
Trigger: GCCTCTGCAGCTTGGCGTCCATACCTTGGTGGCAGA...GCTCCCAATGCAAGAGTTCCCGCAAGCCCAGCAGGAGCTGTGCTGCCTTTGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561355.2
3UTR CAA 90 bp ATGGCAAACGCCAAGTCCACGCTCATGTTCTATGTAGTTGGATTCTaGTGGCAGCCGGGTGGGGGCGTGGCCACAAGGCTGGTAGGCTTG +
Preference number: 2 (lower is better)
Translates to: MANAKSTLMFYVVGF*WQPGGGVATRLVGL
Trigger: CAAGCCTACCAGCCTTGTGGCCACGCCCCCACCCGGCTGCCACAAGAATCCAACTACATAGAACATGAGCGTGGACTTGGCGTTTGCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR-3UTR GCA 90 bp CCAATGTCCAAAGCTGGGCTGAAGAGCCCCATACCCGGTATGCTGTCTCTGAACGCTTGCGGGAACTCTTaGATTGGGAGCCCTGGTGGC +
Preference number: 2 (lower is better)
Translates to: PMSKAGLKSPIPGMLSLNACGNS*IGSPGG
Trigger: GCCACCAGGGCTCCCAATGCAAGAGTTCCCGCAAGC...GTTCAGAGACAGCATACCGGGTATGGGGCTCTTCAGCCCAGCTTTGGACATTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561355.2
3UTR CAA 90 bp CCCGGGGCCCATGCAGGAGACCAAGCTAAGGCTTCCTTAGTGAGCTaGCCCGGCTCTGCTCCTTGGCTGCAAAAGTCTAAATGTCTTTCA +
Preference number: 2 (lower is better)
Translates to: PGAHAGDQAKASLVS*PGSAPWLQKSKCLS
Trigger: TGAAAGACATTTAGACTTTTGCAGCCAAGGAGCAGAGCCGGGCAAGCTCACTAAGGAAGCCTTAGCTTGGTCTCCTGCATGGGCCCCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR-3UTR GCA 90 bp CTGACACCCTCGGTTCTTTCCACAGAGCACCCACGGAAGTTTCTCAACACTTCTGCGGGTGGTATGAACTaGGTGGCACTGCTGTCCTCG +
Preference number: 2 (lower is better)
Translates to: LTPSVLSTEHPRKFLNTSAGGMN*VALLSS
Trigger: CGAGGACAGCAGTGCCACGCAGTTCATACCACCCGC...AGAAGTGTTGAGAAACTTCCGTGGGTGCTCTGTGGAAAGAACCGAGGGTGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR-3UTR GCA 90 bp AGTGACACGTGTGCAAGCACAAAGGTACAGTACTCGAGGGACAGTACAGGGTATAAGGCTCGGCGGGTGTaGAGCAGTGCCAGCCAGATG +
Preference number: 2 (lower is better)
Translates to: SDTCASTKVQYSRDSTGYKARRV*SSASQM
Trigger: CATCTGGCTGGCACTGCTGCACACCCGCCGAGCCTT...ATACCCTGTACTGTCCCTCGAGTACTGTACCTTTGTGCTTGCACACGTGTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR-3UTR GCA 90 bp CTGACCAAGGACACTCAGAGTGACTACACCACAGCTCTGACACCAAAGCCTTCTAGGCAGCACAGCTCCTaGTGGGCTTGCGGGAACTCT +
Preference number: 2 (lower is better)
Translates to: LTKDTQSDYTTALTPKPSRQHSS*WACGNS
Trigger: AGAGTTCCCGCAAGCCCAGCAGGAGCTGTGCTGCCT...AGAAGGCTTTGGTGTCAGAGCTGTGGTGTAGTCACTCTGAGTGTCCTTGGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561355.2
3UTR-3UTR TCA 90 bp AGTGACACGTGTGCAAGCACAAAGGTACAGTACTCGAGGGACAGTACAGGGTATCCCATGCGGGTGGTATaGACTGCGTGGCACTGCTGT +
Preference number: 2 (lower is better)
Translates to: SDTCASTKVQYSRDSTGYPMRVV*TAWHCC
Trigger: ACAGCAGTGCCACGCAGTTCATACCACCCGCATGGG...ATACCCTGTACTGTCCCTCGAGTACTGTACCTTTGTGCTTGCACACGTGTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR-3UTR GCA 90 bp TTCTCTGCCTCTAGGGTAGTAAAAACAAAAACACAGCTCGTAAGACAGGGTGGAGGAAGGCGGGGCAGGTaGCCATCCGCCCCAGTGAAG +
Preference number: 2 (lower is better)
Translates to: FSASRVVKTKTQLVRQGGGRRGR*PSAPVK
Trigger: CTTCACTGGGGCGGATGGGCACCTGCCCCGCCTTCC...TCCACCCTGTCTTACGAGCTGTGTTTTTGTTTTTACTACCCTAGAGGCAGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR-3UTR CCA 90 bp GCATCTCTAAGGTACAAAGCTTTAGGAAGTGCAGGCCAGAGTGGATGTTCCCGGAGGCTTGCGGGTGGGTaGGTTTCAGACCTGAGTCTG +
Preference number: 2 (lower is better)
Translates to: ASLRYKALGSAGQSGCSRRLAGG*VSDLSL
Trigger: CAGACTCAGGTCTGAAACCCACCCACCCGCAAGCCT...CCGGGAACATCCACTCTGGCCTGCACTTCCTAAAGCTTTGTACCTTAGAGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR-3UTR CCA 90 bp ATCCTAGGCCTGGGCTTGTGTCCTCAGAGGTCCCAAATGTCGTCTTACCTTCAGTCTCAGAGACGGGCATaGAGGCAACGTCCTGGTTCT +
Preference number: 2 (lower is better)
Translates to: ILGLGLCPQRSQMSSYLQSQRRA*RQRPGS
Trigger: AGAACCAGGACGTTGCCTCCATGCCCGTCTCTGAGA...CTGAAGGTAAGACGACATTTGGGACCTCTGAGGACACAAGCCCAGGCCTAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR-3UTR CCA 90 bp AGTGACACGTGTGCAAGCACAAAGGTACAGTACTCGAGGGACAGTACAGGGTATAAGTGCAGGCCAGAGTaGATGTTCCCGGAAGGCGGG +
Preference number: 2 (lower is better)
Translates to: SDTCASTKVQYSRDSTGYKCRPE*MFPEGG
Trigger: CCCGCCTTCCGGGAACATCCACTCTGGCCTGCACTT...ATACCCTGTACTGTCCCTCGAGTACTGTACCTTTGTGCTTGCACACGTGTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR-3UTR TCA 90 bp AGAGCTCTGCAGATGCAGACTTTAGGGGAACTAATGGGGGTATCTGACAATAACGGGCCCTTGCCAGGGTaGCAGTGGGCATATCTGGAG +
Preference number: 2 (lower is better)
Translates to: RALQMQTLGELMGVSDNNGPLPG*QWAYLE
Trigger: CTCCAGATATGCCCACTGTCACCCTGGCAAGGGCCC...GTTATTGTCAGATACCCCCATTAGTTCCCCTAAAGTCTGCATCTGCAGAGCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR-3UTR GCA 90 bp CTGACACCCTCGGTTCTTTCCACAGAGCACCCACGGAAGTTTCTCAACACTTCTGTTGTCTGCCAGAGGTaGTTCCCTTCGAGGTACCTG +
Preference number: 2 (lower is better)
Translates to: LTPSVLSTEHPRKFLNTSVVCQR*FPSRYL
Trigger: CAGGTACCTCGAAGGGAAGCACCTCTGGCAGACAAC...AGAAGTGTTGAGAAACTTCCGTGGGTGCTCTGTGGAAAGAACCGAGGGTGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR-3UTR CCA 90 bp CTTAGGAAGCAACCCCATCACCGCAATTACCGTTTCTTATGTCACAGCACCTTGGTAGTTGGATTCTTGTaGCAGCCGGGTGGGGGCGTG +
Preference number: 2 (lower is better)
Translates to: LRKQPHHRNYRFLCHSTLVVGFL*QPGGGV
Trigger: CACGCCCCCACCCGGCTGCCACAAGAATCCAACTAC...CAAGGTGCTGTGACATAAGAAACGGTAATTGCGGTGATGGGGTTGCTTCCTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR-3UTR CCA 90 bp CTTTGCCTTAGGAAGCAACCCCATCACCGCAATTACCGTTTCTTATGTCACAGCCTGCCCCTCCCTCCATaGTGTCGCCGGCTTTCAGAA +
Preference number: 2 (lower is better)
Translates to: LCLRKQPHHRNYRFLCHSLPLPP*CRRLSE
Trigger: TTCTGAAAGCCGGCGACACCATGGAGGGAGGGGCAG...GCTGTGACATAAGAAACGGTAATTGCGGTGATGGGGTTGCTTCCTAAGGCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR CAA 90 bp AAGCAACCCCATCACCGCAATTACCGTTTCTTATGTCACAGCACCTaGAAGAGAGGCCCTTCTGTTTCCCTACACGGTGGACAGCAGAGC +
Preference number: 2 (lower is better)
Translates to: KQPHHRNYRFLCHST*KRGPSVSLHGGQQS
Trigger: GCTCTGCTGTCCACCGTGTAGGGAAACAGAAGGGCCTCTCTTCAAGGTGCTGTGACATAAGAAACGGTAATTGCGGTGATGGGGTTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR CAA 90 bp TGCTCTCTCCTCGAGCTGTCTCTGATCCCTCTGCACAGTAGCCCTTaGTCACTAGCGGTGTCACCTACCTACAGTTATAGAGGTGTGAAG +
Preference number: 2 (lower is better)
Translates to: CSLLELSLIPLHSSP*SLAVSPTYSYRGVK
Trigger: CTTCACACCTCTATAACTGTAGGTAGGTGACACCGCTAGTGACAAAGGGCTACTGTGCAGAGGGATCAGAGACAGCTCGAGGAGAGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561355.2
3UTR-3UTR TCA 90 bp TCCATGGTGTCGCCGGCTTTCAGAATAAAGCCTTTTCTAGCATGTCTCGTTTTGCCTGAGTCTGAGCTTTaGGCGACCCTTGGGACTGCG +
Preference number: 2 (lower is better)
Translates to: SMVSPAFRIKPFLACLVLPESEL*ATLGTA
Trigger: CGCAGTCCCAAGGGTCGCTCAAAGCTCAGACTCAGG...CAAAACGAGACATGCTAGAAAAGGCTTTATTCTGAAAGCCGGCGACACCATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR-3UTR GCA 90 bp AGAGCTCTGCAGATGCAGACTTTAGGGGAACTAATGGGGGTATCTGACAATAACAGGCTCACCAACACCTaGCCCTCCCTCCATGGTGTC +
Preference number: 2 (lower is better)
Translates to: RALQMQTLGELMGVSDNNRLTNT*PSLHGV
Trigger: GACACCATGGAGGGAGGGGCAGGTGTTGGTGAGCCT...GTTATTGTCAGATACCCCCATTAGTTCCCCTAAAGTCTGCATCTGCAGAGCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR-3UTR GCA 90 bp CTTTGCCTTAGGAAGCAACCCCATCACCGCAATTACCGTTTCTTATGTCACAGCCTCTTGACGGTTGTCTaGCAGAGGTGCTTCCCTTCG +
Preference number: 2 (lower is better)
Translates to: LCLRKQPHHRNYRFLCHSLLTVV*QRCFPS
Trigger: CGAAGGGAAGCACCTCTGGCAGACAACCGTCAAGAG...GCTGTGACATAAGAAACGGTAATTGCGGTGATGGGGTTGCTTCCTAAGGCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR-3UTR GCA 90 bp GCCTCTAGGGTAGTAAAAACAAAAACACAGCTCGTAAGACAGGGTGGAGAAGGCTCAAAGAGGCCACTCTaGTTGTCTGCTGCCAGGCGT +
Preference number: 2 (lower is better)
Translates to: ASRVVKTKTQLVRQGGEGSKRPL*LSAARR
Trigger: ACGCCTGGCAGCAGACAAGCAGAGTGGCCTCTTTGA...GCCTTCTCCACCCTGTCTTACGAGCTGTGTTTTTGTTTTTACTACCCTAGAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR-3UTR CCA 90 bp AGAGCTCTGCAGATGCAGACTTTAGGGGAACTAATGGGGGTATCTGACAATAACGGGTACCACAAAGTCTaGGGCTACAGGAAGGCTCGG +
Preference number: 2 (lower is better)
Translates to: RALQMQTLGELMGVSDNNGYHKV*GYRKAR
Trigger: CCGAGCCTTCCTGTAGCCCCAGACTTTGTGGTACCC...GTTATTGTCAGATACCCCCATTAGTTCCCCTAAAGTCTGCATCTGCAGAGCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR-3UTR TCA 90 bp CTGACCAAGGACACTCAGAGTGACTACACCACAGCTCTGACACCAAAGCCTTCTCCGGTATGCTGTCTCTaGACTATGGAATATGCTCTC +
Preference number: 2 (lower is better)
Translates to: LTKDTQSDYTTALTPKPSPVCCL*TMEYAL
Trigger: GAGAGCATATTCCATAGTTCAGAGACAGCATACCGG...AGAAGGCTTTGGTGTCAGAGCTGTGGTGTAGTCACTCTGAGTGTCCTTGGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561355.2
3UTR-3UTR GCA 90 bp CAGACTTTAGGGGAACTAATGGGGGTATCTGACAATAACCCAATCAATCCTTTTGCGGGTGTGCAGCAGTaGCAGCCAGATGGCGTTCCT +
Preference number: 2 (lower is better)
Translates to: QTLGELMGVSDNNPINPFAGVQQ*QPDGVP
Trigger: AGGAACGCCATCTGGCTGGCACTGCTGCACACCCGC...AAAAGGATTGATTGGGTTATTGTCAGATACCCCCATTAGTTCCCCTAAAGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR-3UTR CCA 90 bp GCCTCTAGGGTAGTAAAAACAAAAACACAGCTCGTAAGACAGGGTGGAGAAGGCTTCTTCCCATGCGGGTaGTATGAACTGCGTGGCACT +
Preference number: 2 (lower is better)
Translates to: ASRVVKTKTQLVRQGGEGFFPCG*YELRGT
Trigger: AGTGCCACGCAGTTCATACCACCCGCATGGGAAGAA...GCCTTCTCCACCCTGTCTTACGAGCTGTGTTTTTGTTTTTACTACCCTAGAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR-3UTR TCA 90 bp CTTAGGAAGCAACCCCATCACCGCAATTACCGTTTCTTATGTCACAGCACCTTGATGATGTCTCTCTCTTaGCGGTTGTCTGCCAGAGGT +
Preference number: 2 (lower is better)
Translates to: LRKQPHHRNYRFLCHSTLMMSLS*RLSARG
Trigger: ACCTCTGGCAGACAACCGTCAAGAGAGAGACATCAT...CAAGGTGCTGTGACATAAGAAACGGTAATTGCGGTGATGGGGTTGCTTCCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR-3UTR TCA 90 bp AGTGACACGTGTGCAAGCACAAAGGTACAGTACTCGAGGGACAGTACAGGGTATTATGTCACAGCACCTTaGAGAGAGGCCCTTCTGTTT +
Preference number: 2 (lower is better)
Translates to: SDTCASTKVQYSRDSTGYYVTAP*REALLF
Trigger: AAACAGAAGGGCCTCTCTTCAAGGTGCTGTGACATA...ATACCCTGTACTGTCCCTCGAGTACTGTACCTTTGTGCTTGCACACGTGTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR-3UTR TCA 90 bp CAGACTTTAGGGGAACTAATGGGGGTATCTGACAATAACCCAATCAATCCTTTTTGGGCCGCTCCATCCTaGCACCCTCGGTTCTTTCCA +
Preference number: 2 (lower is better)
Translates to: QTLGELMGVSDNNPINPFWAAPS*HPRFFP
Trigger: TGGAAAGAACCGAGGGTGTCAGGATGGAGCGGCCCA...AAAAGGATTGATTGGGTTATTGTCAGATACCCCCATTAGTTCCCCTAAAGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR-3UTR TCA 90 bp AATGTCCAAAGCTGGGCTGAAGAGCCCCATACCCGGTATGCTGTCTCTGAACTAAGAGTACCTTCAGAGTaGTGCTCTAGGATTTCTGAG +
Preference number: 2 (lower is better)
Translates to: NVQSWAEEPHTRYAVSELRVPSE*CSRISE
Trigger: CTCAGAAATCCTAGAGCATCACTCTGAAGGTACTCT...TAGTTCAGAGACAGCATACCGGGTATGGGGCTCTTCAGCCCAGCTTTGGACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561355.2
3UTR-3UTR CCA 90 bp AGTGACACGTGTGCAAGCACAAAGGTACAGTACTCGAGGGACAGTACAGGGTATCATGTTCTATGTAGTTaGATTCTTGTGGCAGCCGGG +
Preference number: 2 (lower is better)
Translates to: SDTCASTKVQYSRDSTGYHVLCS*ILVAAG
Trigger: CCCGGCTGCCACAAGAATCCAACTACATAGAACATG...ATACCCTGTACTGTCCCTCGAGTACTGTACCTTTGTGCTTGCACACGTGTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR-3UTR CCA 90 bp ATGACAGGCGTGATGATAATGGGTACCACAAAGTCTGGGGCTACAGGAAGGCTCGGTCAAGAAGGTAGATaGAGAGAAACGTGTGCTAAG +
Preference number: 2 (lower is better)
Translates to: MTGVMIMGTTKSGATGRLGQEGR*RETCAK
Trigger: CTTAGCACACGTTTCTCTCCATCTACCTTCTTGACC...GAGCCTTCCTGTAGCCCCAGACTTTGTGGTACCCATTATCATCACGCCTGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR-3UTR CCA 90 bp TCCTCAGAGGTCCCAAATGTCGTCTTACCTTCAGATAAATGGCCACGGTCGGTAAAACCCAGACTCTCTTaGAACATTCTTCCCATGCGG +
Preference number: 2 (lower is better)
Translates to: SSEVPNVVLPSDKWPRSVKPRLS*NILPMR
Trigger: CCGCATGGGAAGAATGTTCCAAGAGAGTCTGGGTTT...TACCGACCGTGGCCATTTATCTGAAGGTAAGACGACATTTGGGACCTCTGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR-3UTR CCA 90 bp GCCTCTAGGGTAGTAAAAACAAAAACACAGCTCGTAAGACAGGGTGGAGAAGGCTCGGTAGAAAGCCACTaGGATGTGGTACAGCATCTC +
Preference number: 2 (lower is better)
Translates to: ASRVVKTKTQLVRQGGEGSVESH*DVVQHL
Trigger: GAGATGCTGTACCACATCCCAGTGGCTTTCTACCGA...GCCTTCTCCACCCTGTCTTACGAGCTGTGTTTTTGTTTTTACTACCCTAGAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR CAA 90 bp GGTTCTTTCCACAGAGCACCCACGGAAGTTTCTCAACACTTCTCGTaGATTCAAGTGGAAGTGAGTAAATTCCCTGACATCCCTACCGCT +
Preference number: 2 (lower is better)
Translates to: GSFHRAPTEVSQHFS*IQVEVSKFPDIPTA
Trigger: AGCGGTAGGGATGTCAGGGAATTTACTCACTTCCACTTGAATCAACGAGAAGTGTTGAGAAACTTCCGTGGGTGCTCTGTGGAAAGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR-3UTR GCA 90 bp TTCTCTGCCTCTAGGGTAGTAAAAACAAAAACACAGCTCGTAAGACAGGGTGGAAGAGCAGTCAGGCCTTaGTCTACAGATCCTAGGCCT +
Preference number: 2 (lower is better)
Translates to: FSASRVVKTKTQLVRQGGRAVRP*STDPRP
Trigger: AGGCCTAGGATCTGTAGAGCAAGGCCTGACTGCTCT...TCCACCCTGTCTTACGAGCTGTGTTTTTGTTTTTACTACCCTAGAGGCAGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR-3UTR CCA 90 bp GCCTCTAGGGTAGTAAAAACAAAAACACAGCTCGTAAGACAGGGTGGAGAAGGCATGGAGGCAACGTCCTaGTTCTCATGTGGTCAAGAA +
Preference number: 2 (lower is better)
Translates to: ASRVVKTKTQLVRQGGEGMEATS*FSCGQE
Trigger: TTCTTGACCACATGAGAACCAGGACGTTGCCTCCAT...GCCTTCTCCACCCTGTCTTACGAGCTGTGTTTTTGTTTTTACTACCCTAGAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR-3UTR CCA 90 bp AGTGACACGTGTGCAAGCACAAAGGTACAGTACTCGAGGGACAGTACAGGGTATTTACCTTCAGATAAATaGCCACGGTCGGTAGAAAGC +
Preference number: 2 (lower is better)
Translates to: SDTCASTKVQYSRDSTGYLPSDK*PRSVES
Trigger: GCTTTCTACCGACCGTGGCCATTTATCTGAAGGTAA...ATACCCTGTACTGTCCCTCGAGTACTGTACCTTTGTGCTTGCACACGTGTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR-3UTR CCA 90 bp ACCAAGGACACTCAGAGTGACTACACCACAGCTCTGACACCAAAGCCTTCTCTAGCTGTCTCTGAACTATaGAATATGCTCTCTCCTCGA +
Preference number: 2 (lower is better)
Translates to: TKDTQSDYTTALTPKPSLAVSEL*NMLSPR
Trigger: TCGAGGAGAGAGCATATTCCATAGTTCAGAGACAGC...TAGAGAAGGCTTTGGTGTCAGAGCTGTGGTGTAGTCACTCTGAGTGTCCTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561355.2
3UTR CAA 90 bp TGTCAAAAGCGAGTCAAGACAAGAACACTAAATGATGTCTCTCTCTaGACGGTTGTCTGCCAGAGGTGCTTCCCTTCGAGGTACCTGAAA +
Preference number: 2 (lower is better)
Translates to: CQKRVKTRTLNDVSL*TVVCQRCFPSRYLK
Trigger: TTTCAGGTACCTCGAAGGGAAGCACCTCTGGCAGACAACCGTCAAGAGAGAGACATCATTTAGTGTTCTTGTCTTGACTCGCTTTTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR-3UTR TCA 90 bp AGGACCTTCCTTCATCATGCATCATCCTTGCCCCACCAAGAAGATGGGTCAATGGACAAGAACACTAAATaGTGTCTCTCTCTTGACGGT +
Preference number: 2 (lower is better)
Translates to: RTFLHHASSLPHQEDGSMDKNTK*CLSLDG
Trigger: ACCGTCAAGAGAGAGACATCATTTAGTGTTCTTGTC...CATTGACCCATCTTCTTGGTGGGGCAAGGATGATGCATGATGAAGGAAGGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR-3UTR GCA 90 bp TTCTCTGCCTCTAGGGTAGTAAAAACAAAAACACAGCTCGTAAGACAGGGTGGAGCCCAAGCTTACCTTTaGCTTAGGAAGCAACCCCAT +
Preference number: 2 (lower is better)
Translates to: FSASRVVKTKTQLVRQGGAQAYL*LRKQPH
Trigger: ATGGGGTTGCTTCCTAAGGCAAAGGTAAGCTTGGGC...TCCACCCTGTCTTACGAGCTGTGTTTTTGTTTTTACTACCCTAGAGGCAGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR-3UTR TCA 90 bp TCCTCAGAGGTCCCAAATGTCGTCTTACCTTCAGATAAATGGCCACGGTCGGTAATTGAAGTTACTTTGTaGCTCATGCCTACTTTCTCC +
Preference number: 2 (lower is better)
Translates to: SSEVPNVVLPSDKWPRSVIEVTL*LMPTFS
Trigger: GGAGAAAGTAGGCATGAGTCACAAAGTAACTTCAAT...TACCGACCGTGGCCATTTATCTGAAGGTAAGACGACATTTGGGACCTCTGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR-3UTR TCA 90 bp AGAGCTCTGCAGATGCAGACTTTAGGGGAACTAATGGGGGTATCTGACAATAACGGGATGTTTCCTCCATaGTATACCAAGCACTGGAAA +
Preference number: 2 (lower is better)
Translates to: RALQMQTLGELMGVSDNNGMFPP*YTKHWK
Trigger: TTTCCAGTGCTTGGTATATCATGGAGGAAACATCCC...GTTATTGTCAGATACCCCCATTAGTTCCCCTAAAGTCTGCATCTGCAGAGCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR-3UTR TCA 90 bp CAGACTTTAGGGGAACTAATGGGGGTATCTGACAATAACCCAATCAATCCTTTTCCATGGAAGTCCAAGTaGGACCTTCCGTCTGAAATC +
Preference number: 2 (lower is better)
Translates to: QTLGELMGVSDNNPINPFPWKSK*DLPSEI
Trigger: GATTTCAGACGGAAGGTCTCACTTGGACTTCCATGG...AAAAGGATTGATTGGGTTATTGTCAGATACCCCCATTAGTTCCCCTAAAGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR-3UTR TCA 90 bp CAGACTTTAGGGGAACTAATGGGGGTATCTGACAATAACCCAATCAATCCTTTTTGGACAGCAGAGCTCTaGAAATTAGATGCTTCCCCA +
Preference number: 2 (lower is better)
Translates to: QTLGELMGVSDNNPINPFWTAEL*KLDASP
Trigger: TGGGGAAGCATCTAATTTTCAGAGCTCTGCTGTCCA...AAAAGGATTGATTGGGTTATTGTCAGATACCCCCATTAGTTCCCCTAAAGTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR-3UTR GCA 90 bp CAGACTTTAGGGGAACTAATGGGGGTATCTGACAATAACCCAATCAATCCTTTTATCATGCATCATCCTTaGCCCACCAAGAAGATGGGT +
Preference number: 2 (lower is better)
Translates to: QTLGELMGVSDNNPINPFIMHHP*PTKKMG
Trigger: ACCCATCTTCTTGGTGGGGCAAGGATGATGCATGAT...AAAAGGATTGATTGGGTTATTGTCAGATACCCCCATTAGTTCCCCTAAAGTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR-3UTR TCA 90 bp CAGACTTTAGGGGAACTAATGGGGGTATCTGACAATAACCCAATCAATCCTTTTAGAGAGGCTTCTTTCTaGTTTAAGCTAACTCTACGG +
Preference number: 2 (lower is better)
Translates to: QTLGELMGVSDNNPINPFREASF*FKLTLR
Trigger: CCGTAGAGTTAGCTTAAATCAGAAAGAAGCCTCTCT...AAAAGGATTGATTGGGTTATTGTCAGATACCCCCATTAGTTCCCCTAAAGTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR GCA 72 bp TGCTGGTGGCCAGGCCTGAAGGGGAGGACAGCAGTCTaGGCAGGCCGCGGGGCGAGGGTGGGCCGCTCCATC +
Preference number: 3 (lower is better)
Translates to: CWWPGLKGRTAV*AGRGARVGRSI
Trigger: GATGGAGCGGCCCACCCTCGCCCCGCGGCCTGCGCAGACTGCTGTCCTCCCCTTCAGGCCTGGCCACCAGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR TCA 72 bp GCGCAGGCCGCGGGGCGAGGGTGGGCCGCTCCATCCTaGCACCCTCGGTTCTTTCCACAGAGCACCCACGGA +
Preference number: 3 (lower is better)
Translates to: AQAAGRGWAAPS*HPRFFPQSTHG
Trigger: TCCGTGGGTGCTCTGTGGAAAGAACCGAGGGTGTCAGGATGGAGCGGCCCACCCTCGCCCCGCGGCCTGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR GCA 72 bp ATGTCGGCGTCGGCCACCACCAGGGTCTCCACCGTGTaGTCGCTGGTGAGCCGGATAGCGTTCCTCCGCTCC +
Preference number: 3 (lower is better)
Translates to: MSASATTRVSTV*SLVSRIAFLRS
Trigger: GGAGCGGAGGAACGCTATCCGGCTCACCAGCGAGCACACGGTGGAGACCCTGGTGGTGGCCGACGCCGACAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558960.1
3UTR GCA 72 bp CAGGCCAGAGTGGATGTTCCCGGAAGGCGGGGCAGGTaGCCATCCGCCCCAGTGAAGCTGGCCCAAGCTTAC +
Preference number: 3 (lower is better)
Translates to: QARVDVPGRRGR*PSAPVKLAQAY
Trigger: GTAAGCTTGGGCCAGCTTCACTGGGGCGGATGGGCACCTGCCCCGCCTTCCGGGAACATCCACTCTGGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR GCA 72 bp CACAAAGTCTGGGGCTACAGGAAGGCTCGGCGGGTGTaGAGCAGTGCCAGCCAGATGGCGTTCCTCCCCTGG +
Preference number: 3 (lower is better)
Translates to: HKVWGYRKARRV*SSASQMAFLPW
Trigger: CCAGGGGAGGAACGCCATCTGGCTGGCACTGCTGCACACCCGCCGAGCCTTCCTGTAGCCCCAGACTTTGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR TCA 72 bp TTCCCGGAAGGCGGGGCAGGTGCCCATCCGCCCCAGTaGAGCTGGCCCAAGCTTACCTTTGCCTTAGGAAGC +
Preference number: 3 (lower is better)
Translates to: FPEGGAGAHPPQ*SWPKLTFALGS
Trigger: GCTTCCTAAGGCAAAGGTAAGCTTGGGCCAGCTTCACTGGGGCGGATGGGCACCTGCCCCGCCTTCCGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR GCA 72 bp CCCCAGAGAAGCCACGGGCAGAGGCTCACCAACACCTaGCCCTCCCTCCATGGTGTCGCCGGCTTTCAGAAT +
Preference number: 3 (lower is better)
Translates to: PQRSHGQRLTNT*PSLHGVAGFQN
Trigger: ATTCTGAAAGCCGGCGACACCATGGAGGGAGGGGCAGGTGTTGGTGAGCCTCTGCCCGTGGCTTCTCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR CCA 72 bp GGGCGTGGCCACAAGGCTGGTAGGCTTGCGGGTGGGTaGGTTTCAGACCTGAGTCTGAGCTTTGAGCGACCC +
Preference number: 3 (lower is better)
Translates to: GRGHKAGRLAGG*VSDLSLSFERP
Trigger: GGGTCGCTCAAAGCTCAGACTCAGGTCTGAAACCCACCCACCCGCAAGCCTACCAGCCTTGTGGCCACGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR CCA 72 bp AGCAGTGCCAGCCAGATGGCGTTCCTCCCCTGGTCCTaGCACATCAGGCTGCTCCGTGCCAGGATAGAGCAG +
Preference number: 3 (lower is better)
Translates to: SSASQMAFLPWS*HIRLLRARIEQ
Trigger: CTGCTCTATCCTGGCACGGAGCAGCCTGATGTGCCAGGACCAGGGGAGGAACGCCATCTGGCTGGCACTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR CCA 72 bp GTGTGCAGCAGTGCCAGCCAGATGGCGTTCCTCCCCTaGTCCTGGCACATCAGGCTGCTCCGTGCCAGGATA +
Preference number: 3 (lower is better)
Translates to: VCSSASQMAFLP*SWHIRLLRARI
Trigger: TATCCTGGCACGGAGCAGCCTGATGTGCCAGGACCAGGGGAGGAACGCCATCTGGCTGGCACTGCTGCACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR-3UTR CAA 90 bp GTGCTCGCTGGTGAGCCGGATAGCGTTCCTCCGCTCCCGCCAGTCCCGCGAAGGTTTTCTGTTAGAACCTaGCAGAGCTGCTCAGGTCTC +
Preference number: 3 (lower is better)
Translates to: VLAGEPDSVPPLPPVPRRFSVRT*QSCSGL
Trigger: GAGACCTGAGCAGCTCTGCAAGGTTCTAACAGAAAA...CCTTCGCGGGACTGGCGGGAGCGGAGGAACGCTATCCGGCTCACCAGCGAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558960.1
3UTR GCA 72 bp GTGCTACCATCCTCTGTGCTCTCAAAGAGGCCACTCTaGTTGTCTGCTGCCAGGCGTAAGGGGGCTGCAGGG +
Preference number: 3 (lower is better)
Translates to: VLPSSVLSKRPL*LSAARRKGAAG
Trigger: CCCTGCAGCCCCCTTACGCCTGGCAGCAGACAAGCAGAGTGGCCTCTTTGAGAGCACAGAGGATGGTAGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR GCA 72 bp GCTGATCCTCAAAGGCAGCACAGCTCCTGCTGGGCTTaGGGGAACTCTTGCATTGGGAGCCCTGGTGGCCAT +
Preference number: 3 (lower is better)
Translates to: ADPQRQHSSCWA*GNSCIGSPGGH
Trigger: ATGGCCACCAGGGCTCCCAATGCAAGAGTTCCCGCAAGCCCAGCAGGAGCTGTGCTGCCTTTGAGGATCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561355.2
3UTR GCA 72 bp CCGGCCTCCTTGCAGGTAGGGTGCTACCATCCTCTGTaGTCTCAAAGAGGCCACTCTGCTTGTCTGCTGCCA +
Preference number: 3 (lower is better)
Translates to: PASLQVGCYHPL*SQRGHSACLLP
Trigger: TGGCAGCAGACAAGCAGAGTGGCCTCTTTGAGAGCACAGAGGATGGTAGCACCCTACCTGCAAGGAGGCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR CCA 72 bp GGCAAACGCCAAGTCCACGCTCATGTTCTATGTAGTTaGATTCTTGTGGCAGCCGGGTGGGGGCGTGGCCAC +
Preference number: 3 (lower is better)
Translates to: GKRQVHAHVLCS*ILVAAGWGRGH
Trigger: GTGGCCACGCCCCCACCCGGCTGCCACAAGAATCCAACTACATAGAACATGAGCGTGGACTTGGCGTTTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR CCA 72 bp TCTGAGGCTGATCCTCAAAGGCAGCACAGCTCCTGCTaGGCTTGCGGGAACTCTTGCATTGGGAGCCCTGGT +
Preference number: 3 (lower is better)
Translates to: SEADPQRQHSSC*ACGNSCIGSPG
Trigger: ACCAGGGCTCCCAATGCAAGAGTTCCCGCAAGCCCAGCAGGAGCTGTGCTGCCTTTGAGGATCAGCCTCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561355.2
3UTR GCA 72 bp AGGCAGCACAGCTCCTGCTGGGCTTGCGGGAACTCTTaGATTGGGAGCCCTGGTGGCCATAGAAGAAGTATG +
Preference number: 3 (lower is better)
Translates to: RQHSSCWACGNS*IGSPGGHRRSM
Trigger: CATACTTCTTCTATGGCCACCAGGGCTCCCAATGCAAGAGTTCCCGCAAGCCCAGCAGGAGCTGTGCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561355.2
3UTR CCA 72 bp TCTAAGGTACAAAGCTTTAGGAAGTGCAGGCCAGAGTaGATGTTCCCGGAAGGCGGGGCAGGTGCCCATCCG +
Preference number: 3 (lower is better)
Translates to: SKVQSFRKCRPE*MFPEGGAGAHP
Trigger: CGGATGGGCACCTGCCCCGCCTTCCGGGAACATCCACTCTGGCCTGCACTTCCTAAAGCTTTGTACCTTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR GCA 72 bp ATTTCTGAGGCTGATCCTCAAAGGCAGCACAGCTCCTaGTGGGCTTGCGGGAACTCTTGCATTGGGAGCCCT +
Preference number: 3 (lower is better)
Translates to: ISEADPQRQHSS*WACGNSCIGSP
Trigger: AGGGCTCCCAATGCAAGAGTTCCCGCAAGCCCAGCAGGAGCTGTGCTGCCTTTGAGGATCAGCCTCAGAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561355.2
3UTR CCA 72 bp AACCCAGACTCTCTTGGAACATTCTTCCCATGCGGGTaGTATGAACTGCGTGGCACTGCTGTCCTCGCTGGC +
Preference number: 3 (lower is better)
Translates to: NPDSLGTFFPCG*YELRGTAVLAG
Trigger: GCCAGCGAGGACAGCAGTGCCACGCAGTTCATACCACCCGCATGGGAAGAATGTTCCAAGAGAGTCTGGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR CCA 72 bp GATGACAGGCGTGATGATAATGGGTACCACAAAGTCTaGGGCTACAGGAAGGCTCGGCGGGTGTGCAGCAGT +
Preference number: 3 (lower is better)
Translates to: DDRRDDNGYHKV*GYRKARRVCSS
Trigger: ACTGCTGCACACCCGCCGAGCCTTCCTGTAGCCCCAGACTTTGTGGTACCCATTATCATCACGCCTGTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR-3UTR CAA 90 bp CAGACTCTCTTGGAACATTCTTCCCATGCGGGTGGTATGAACTGCGTGGCACTGTATGTAGTTGGATTCTaGTGGCAGCCGGGTGGGGGC +
Preference number: 3 (lower is better)
Translates to: QTLLEHSSHAGGMNCVALYVVGF*WQPGGG
Trigger: GCCCCCACCCGGCTGCCACAAGAATCCAACTACATA...CAGTGCCACGCAGTTCATACCACCCGCATGGGAAGAATGTTCCAAGAGAGTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR GCA 72 bp TCCCCAAACCCAGACTCTCTTGGAACATTCTTCCCATaGGGGTGGTATGAACTGCGTGGCACTGCTGTCCTC +
Preference number: 3 (lower is better)
Translates to: SPNPDSLGTFFP*GWYELRGTAVL
Trigger: GAGGACAGCAGTGCCACGCAGTTCATACCACCCGCATGGGAAGAATGTTCCAAGAGAGTCTGGGTTTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR-3UTR CAA 90 bp CTGACACCCTCGGTTCTTTCCACAGAGCACCCACGGAAGTTTCTCAACACTTCTATCCTAGGCCTGGGCTaGTGTCCTCAGAGGTCCCAA +
Preference number: 3 (lower is better)
Translates to: LTPSVLSTEHPRKFLNTSILGLG*CPQRSQ
Trigger: TTGGGACCTCTGAGGACACAAGCCCAGGCCTAGGAT...AGAAGTGTTGAGAAACTTCCGTGGGTGCTCTGTGGAAAGAACCGAGGGTGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR TCA 72 bp GACACCAAAGCCTTCTCTAGGCCCAATGCCCACAGTTaGTGCACACCAATGTCCAAAGCTGGGCTGAAGAGC +
Preference number: 3 (lower is better)
Translates to: DTKAFSRPNAHS*CTPMSKAGLKS
Trigger: GCTCTTCAGCCCAGCTTTGGACATTGGTGTGCATCAACTGTGGGCATTGGGCCTAGAGAAGGCTTTGGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561355.2
3UTR GCA 72 bp TGGTACAGCATCTCTAAGGTACAAAGCTTTAGGAAGTaGAGGCCAGAGTGGATGTTCCCGGAAGGCGGGGCA +
Preference number: 3 (lower is better)
Translates to: WYSISKVQSFRK*RPEWMFPEGGA
Trigger: TGCCCCGCCTTCCGGGAACATCCACTCTGGCCTGCACTTCCTAAAGCTTTGTACCTTAGAGATGCTGTACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR CCA 72 bp CAATGCCCACAGTTGATGCACACCAATGTCCAAAGCTaGGCTGAAGAGCCCCATACCCGGTATGCTGTCTCT +
Preference number: 3 (lower is better)
Translates to: QCPQLMHTNVQS*AEEPHTRYAVS
Trigger: AGAGACAGCATACCGGGTATGGGGCTCTTCAGCCCAGCTTTGGACATTGGTGTGCATCAACTGTGGGCATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561355.2
3UTR TCA 72 bp AGACTCTCTTGGAACATTCTTCCCATGCGGGTGGTATaGACTGCGTGGCACTGCTGTCCTCGCTGGCATATA +
Preference number: 3 (lower is better)
Translates to: RLSWNILPMRVV*TAWHCCPRWHI
Trigger: TATATGCCAGCGAGGACAGCAGTGCCACGCAGTTCATACCACCCGCATGGGAAGAATGTTCCAAGAGAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR GCA 72 bp CCCATACCCGGTATGCTGTCTCTGAACTATGGAATATaGTCTCTCCTCGAGCTGTCTCTGATCCCTCTGCAC +
Preference number: 3 (lower is better)
Translates to: PIPGMLSLNYGI*SLLELSLIPLH
Trigger: GTGCAGAGGGATCAGAGACAGCTCGAGGAGAGAGCATATTCCATAGTTCAGAGACAGCATACCGGGTATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561355.2
3UTR CCA 72 bp GAAGAGCCCCATACCCGGTATGCTGTCTCTGAACTATaGAATATGCTCTCTCCTCGAGCTGTCTCTGATCCC +
Preference number: 3 (lower is better)
Translates to: EEPHTRYAVSEL*NMLSPRAVSDP
Trigger: GGGATCAGAGACAGCTCGAGGAGAGAGCATATTCCATAGTTCAGAGACAGCATACCGGGTATGGGGCTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561355.2
3UTR-3UTR CAA 90 bp AAGCAACCCCATCACCGCAATTACCGTTTCTTATGTCACAGCACCTTGAAGAGAACAAGGCTGGTAGGCTaGCGGGTGGGTGGGTTTCAG +
Preference number: 3 (lower is better)
Translates to: KQPHHRNYRFLCHSTLKRTRLVG*RVGGFQ
Trigger: CTGAAACCCACCCACCCGCAAGCCTACCAGCCTTGT...TCTCTTCAAGGTGCTGTGACATAAGAAACGGTAATTGCGGTGATGGGGTTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR-3UTR CAA 90 bp CTGACACCCTCGGTTCTTTCCACAGAGCACCCACGGAAGTTTCTCAACACTTCTGAAATGCCCACCAAGTaGGTGAGCAAAACAGGCCTC +
Preference number: 3 (lower is better)
Translates to: LTPSVLSTEHPRKFLNTSEMPTK*VSKTGL
Trigger: GAGGCCTGTTTTGCTCACCAACTTGGTGGGCATTTC...AGAAGTGTTGAGAAACTTCCGTGGGTGCTCTGTGGAAAGAACCGAGGGTGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR-3UTR CAA 90 bp CCAATGTCCAAAGCTGGGCTGAAGAGCCCCATACCCGGTATGCTGTCTCTGAACTCTATCTCTCTGCCCTaGAACCTGGGTAGGTTTCTA +
Preference number: 3 (lower is better)
Translates to: PMSKAGLKSPIPGMLSLNSISLP*NLGRFL
Trigger: TAGAAACCTACCCAGGTTCAAGGGCAGAGAGATAGA...GTTCAGAGACAGCATACCGGGTATGGGGCTCTTCAGCCCAGCTTTGGACATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561355.2
3UTR GCA 72 bp CTCTTGGAACATTCTTCCCATGCGGGTGGTATGAACTaGGTGGCACTGCTGTCCTCGCTGGCATATATAGAT +
Preference number: 3 (lower is better)
Translates to: LLEHSSHAGGMN*VALLSSLAYID
Trigger: ATCTATATATGCCAGCGAGGACAGCAGTGCCACGCAGTTCATACCACCCGCATGGGAAGAATGTTCCAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR CCA 72 bp ACAATAACCCAATCAATCCTTTTCATTCTGAGGGTGTaGGGCCCTTGCCAGGGTGACAGTGGGCATATCTGG +
Preference number: 3 (lower is better)
Translates to: TITQSILFILRV*GPCQGDSGHIW
Trigger: CCAGATATGCCCACTGTCACCCTGGCAAGGGCCCCACACCCTCAGAATGAAAAGGATTGATTGGGTTATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR TCA 72 bp AAGAAGCACAGGGAGATGATCCCATGGAAGTCCAAGTaGGACCTTCCGTCTGAAATCAGGGAGGAGGTGTTA +
Preference number: 3 (lower is better)
Translates to: KKHREMIPWKSK*DLPSEIREEVL
Trigger: TAACACCTCCTCCCTGATTTCAGACGGAAGGTCTCACTTGGACTTCCATGGGATCATCTCCCTGTGCTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR CCA 72 bp ACTATGTTCTCAGAGACGGGCATGGAGGCAACGTCCTaGTTCTCATGTGGTCAAGAAGGTAGATGGAGAGAA +
Preference number: 3 (lower is better)
Translates to: TMFSETGMEATS*FSCGQEGRWRE
Trigger: TTCTCTCCATCTACCTTCTTGACCACATGAGAACCAGGACGTTGCCTCCATGCCCGTCTCTGAGAACATAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR CCA 72 bp TCAGAGGTCCCAAATGTCGTCTTACCTTCAGATAAATaGCCACGGTCGGTAGAAAGCCACTGGGATGTGGTA +
Preference number: 3 (lower is better)
Translates to: SEVPNVVLPSDK*PRSVESHWDVV
Trigger: TACCACATCCCAGTGGCTTTCTACCGACCGTGGCCATTTATCTGAAGGTAAGACGACATTTGGGACCTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR GCA 72 bp AGAACACTAAATGATGTCTCTCTCTTGACGGTTGTCTaGCAGAGGTGCTTCCCTTCGAGGTACCTGAAATCC +
Preference number: 3 (lower is better)
Translates to: RTLNDVSLLTVV*QRCFPSRYLKS
Trigger: GGATTTCAGGTACCTCGAAGGGAAGCACCTCTGGCAGACAACCGTCAAGAGAGAGACATCATTTAGTGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR GCA 72 bp CCCTACACGGTGGACAGCAGAGCTCTGAAAATTAGATaGTTCCCCAAACCCAGACTCTCTTGGAACATTCTT +
Preference number: 3 (lower is better)
Translates to: PYTVDSRALKIR*FPKPRLSWNIL
Trigger: AAGAATGTTCCAAGAGAGTCTGGGTTTGGGGAAGCATCTAATTTTCAGAGCTCTGCTGTCCACCGTGTAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR CCA 72 bp CCTTCATCATGCATCATCCTTGCCCCACCAAGAAGATaGGTCAATGATGACAGGCGTGATGATAATGGGTAC +
Preference number: 3 (lower is better)
Translates to: PSSCIILAPPRR*VNDDRRDDNGY
Trigger: GTACCCATTATCATCACGCCTGTCATCATTGACCCATCTTCTTGGTGGGGCAAGGATGATGCATGATGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR-3UTR CAA 90 bp AGAGCTCTGCAGATGCAGACTTTAGGGGAACTAATGGGGGTATCTGACAATAACAATGATGTCTCTCTCTaGACGGTTGTCTGCCAGAGG +
Preference number: 3 (lower is better)
Translates to: RALQMQTLGELMGVSDNNNDVSL*TVVCQR
Trigger: CCTCTGGCAGACAACCGTCAAGAGAGAGACATCATT...GTTATTGTCAGATACCCCCATTAGTTCCCCTAAAGTCTGCATCTGCAGAGCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR-3UTR CAA 90 bp CAGACTTTAGGGGAACTAATGGGGGTATCTGACAATAACCCAATCAATCCTTTTAAGAGGCCACTCTGCTaGTCTGCTGCCAGGCGTAAG +
Preference number: 3 (lower is better)
Translates to: QTLGELMGVSDNNPINPFKRPLC*SAARRK
Trigger: CTTACGCCTGGCAGCAGACAAGCAGAGTGGCCTCTT...AAAAGGATTGATTGGGTTATTGTCAGATACCCCCATTAGTTCCCCTAAAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR TCA 72 bp AAACACAGCACCAATAAATCAAGAAGCACAGGGAGATaGTCCCATGGAAGTCCAAGTGAGACCTTCCGTCTG +
Preference number: 3 (lower is better)
Translates to: KHSTNKSRSTGR*SHGSPSETFRL
Trigger: CAGACGGAAGGTCTCACTTGGACTTCCATGGGATCATCTCCCTGTGCTTCTTGATTTATTGGTGCTGTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR TCA 72 bp TTTCTAACCGCTTCAGCCAACAGAGTACCTTCAGAGTaGTGCTCTAGGATTTCTGAGGCTGATCCTCAAAGG +
Preference number: 3 (lower is better)
Translates to: FLTASANRVPSE*CSRISEADPQR
Trigger: CCTTTGAGGATCAGCCTCAGAAATCCTAGAGCATCACTCTGAAGGTACTCTGTTGGCTGAAGCGGTTAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561355.2
3UTR-3UTR CAA 90 bp TTCTCTGCCTCTAGGGTAGTAAAAACAAAAACACAGCTCGTAAGACAGGGTGGATTATGTCACAGCACCTaGAAGAGAGGCCCTTCTGTT +
Preference number: 3 (lower is better)
Translates to: FSASRVVKTKTQLVRQGGLCHST*KRGPSV
Trigger: AACAGAAGGGCCTCTCTTCAAGGTGCTGTGACATAA...TCCACCCTGTCTTACGAGCTGTGTTTTTGTTTTTACTACCCTAGAGGCAGAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR TCA 72 bp CAAATGTCAAAAGCGAGTCAAGACAAGAACACTAAATaGTGTCTCTCTCTTGACGGTTGTCTGCCAGAGGTG +
Preference number: 3 (lower is better)
Translates to: QMSKASQDKNTK*CLSLDGCLPEV
Trigger: CACCTCTGGCAGACAACCGTCAAGAGAGAGACATCATTTAGTGTTCTTGTCTTGACTCGCTTTTGACATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR TCA 72 bp AGCTATAATCAATTAACTGACCAAGGACACTCAGAGTaGCTACACCACAGCTCTGACACCAAAGCCTTCTCT +
Preference number: 3 (lower is better)
Translates to: SYNQLTDQGHSE*LHHSSDTKAFS
Trigger: AGAGAAGGCTTTGGTGTCAGAGCTGTGGTGTAGTCACTCTGAGTGTCCTTGGTCAGTTAATTGATTATAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561355.2
3UTR TCA 72 bp TTTATGATGGTTTCACTGAAATCACTGCTCGTGCCATaGACAGAAGGTAGGCTGGTGGATTTCAAGATAAGC +
Preference number: 3 (lower is better)
Translates to: FMMVSLKSLLVP*TEGRLVDFKIS
Trigger: GCTTATCTTGAAATCCACCAGCCTACCTTCTGTTCATGGCACGAGCAGTGATTTCAGTGAAACCATCATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR GCA 72 bp GAGGGACAGTACAGGGTATTAACACAGAAACATCACTaGTGTGATCAGCATCTAGTGGAACAAGAATGTTTA +
Preference number: 3 (lower is better)
Translates to: EGQYRVLTQKHH*CDQHLVEQECL
Trigger: TAAACATTCTTGTTCCACTAGATGCTGATCACAGCAGTGATGTTTCTGTGTTAATACCCTGTACTGTCCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR TCA 72 bp ACAGTACAGGGTATTAACACAGAAACATCACTGCTGTaGTCAGCATCTAGTGGAACAAGAATGTTTATGATG +
Preference number: 3 (lower is better)
Translates to: TVQGINTETSLL*SASSGTRMFMM
Trigger: CATCATAAACATTCTTGTTCCACTAGATGCTGATCACAGCAGTGATGTTTCTGTGTTAATACCCTGTACTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp CGGATAGCGTTCCTCCGCTCCCGCCAGTCCCGCGAAGGCCTGCCCCACGTCGGCGGGCGCCGTCACACATaGTACCCGGGACCGGCAGCC +
Preference number: 4 (lower is better)
Translates to: RIAFLRSRQSREGLPHVGGRRHT*YPGPAA
Trigger: GGCTGCCGGTCCCGGGTACCATGTGTGACGGCGCCC...GCCGACGTGGGGCAGGCCTTCGCGGGACTGGCGGGAGCGGAGGAACGCTATCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558960.1
CDS-3UTR TCA 90 bp ACCTCTGGGCGGCCTCGGCCCCGTGGTACTGCACCATGTCGGCGTCGGCCACCACGGCGCCAGCCGGAGTaGAGCCCTCCAGCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: TSGRPRPRGTAPCRRRPPRRQPE*SPPAFG
Trigger: TCCAAAGGCTGGAGGGCTTCACTCCGGCTGGCGCCG...TGGTGGCCGACGCCGACATGGTGCAGTACCACGGGGCCGAGGCCGCCCAGAGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558960.1
CDS-3UTR TCA 90 bp GAGCCGGATAGCGTTCCTCCGCTCCCGCCAGTCCCGCGAAGGCCTGCCCCACGTCCTGCCCAAGCTGAATaGGGCCAACCTGTGCCCGGG +
Preference number: 4 (lower is better)
Translates to: EPDSVPPLPPVPRRPAPRPAQAE*GQPVPG
Trigger: CCCGGGCACAGGTTGGCCTCATTCAGCTTGGGCAGG...ACGTGGGGCAGGCCTTCGCGGGACTGGCGGGAGCGGAGGAACGCTATCCGGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558960.1
CDS-3UTR CCA 90 bp AGCGTTCCTCCGCTCCCGCCAGTCCCGCGAAGGCCTGCCCCACGTCGGCTTCTTGTCAGGATGAACCTCTaGGCGGCCTCGGCCCCGTGG +
Preference number: 4 (lower is better)
Translates to: SVPPLPPVPRRPAPRRLLVRMNL*AASAPW
Trigger: CCACGGGGCCGAGGCCGCCCAGAGGTTCATCCTGAC...AAGAAGCCGACGTGGGGCAGGCCTTCGCGGGACTGGCGGGAGCGGAGGAACGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558960.1
CDS-3UTR TCA 90 bp TGGGGCTACAGGAAGGCTCGGCGGGTGTGCAGCAGTGCCAGCCAGATGGCGTTCAGGTCGCGGCGCAGCTaGAGGTACAGGTCGCGCCCG +
Preference number: 4 (lower is better)
Translates to: WGYRKARRVCSSASQMAFRSRRS*RYRSRP
Trigger: CGGGCGCGACCTGTACCTTCAGCTGCGCCGCGACCT...GAACGCCATCTGGCTGGCACTGCTGCACACCCGCCGAGCCTTCCTGTAGCCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp ACCTCTGGGCGGCCTCGGCCCCGTGGTACTGCACCATGTCGGCGTCGGCCACCAAGTCCCGCGAAGGCCTaGCCCACGTCGGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: TSGRPRPRGTAPCRRRPPSPAKA*PTSASS
Trigger: AGAAGAAGCCGACGTGGGGCAGGCCTTCGCGGGACT...TGGTGGCCGACGCCGACATGGTGCAGTACCACGGGGCCGAGGCCGCCCAGAGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558960.1
CDS-3UTR CCA 90 bp TGGGGGCGTGGCCACAAGGCTGGTAGGCTTGCGGGTGGGTGGGTTTCAGACCTGGCGGCCTCGGCCCCGTaGTACTGCACCATGTCGGCG +
Preference number: 4 (lower is better)
Translates to: WGRGHKAGRLAGGWVSDLAASAP*YCTMSA
Trigger: CGCCGACATGGTGCAGTACCACGGGGCCGAGGCCGC...CAGGTCTGAAACCCACCCACCCGCAAGCCTACCAGCCTTGTGGCCACGCCCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp GAGCCGGATAGCGTTCCTCCGCTCCCGCCAGTCCCGCGAAGGCCTGCCCCACGTCCACTGAATGGGCCCTaGGAGTTGTTGAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: EPDSVPPLPPVPRRPAPRPLNGP*ELLRGW
Trigger: CCAGCCCCTCAACAACTCCCAGGGCCCATTCAGTGG...ACGTGGGGCAGGCCTTCGCGGGACTGGCGGGAGCGGAGGAACGCTATCCGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558960.1
CDS-3UTR CCA 90 bp CCGGATAGCGTTCCTCCGCTCCCGCCAGTCCCGCGAAGGCCTGCCCCACGTCGGCCTCAGCAGAAGGGCTaGGGGTCAAGGACCATTTGC +
Preference number: 4 (lower is better)
Translates to: PDSVPPLPPVPRRPAPRRPQQKG*GSRTIC
Trigger: GCAAATGGTCCTTGACCCCCAGCCCTTCTGCTGAGG...CCGACGTGGGGCAGGCCTTCGCGGGACTGGCGGGAGCGGAGGAACGCTATCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558960.1
CDS-3UTR TCA 90 bp AGCGTTCCTCCGCTCCCGCCAGTCCCGCGAAGGCCTGCCCCACGTCGGCTTCTTTGCTCCTGCCCAAGCTaGATGAGGCCAACCTGTGCC +
Preference number: 4 (lower is better)
Translates to: SVPPLPPVPRRPAPRRLLCSCPS*MRPTCA
Trigger: GGCACAGGTTGGCCTCATTCAGCTTGGGCAGGAGCA...AAGAAGCCGACGTGGGGCAGGCCTTCGCGGGACTGGCGGGAGCGGAGGAACGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558960.1
CDS-3UTR GCA 90 bp AGCGTTCCTCCGCTCCCGCCAGTCCCGCGAAGGCCTGCCCCACGTCGGCTTCTTAGGGTCTCCACCGTGTaGTCGCTGGTGAGCCGGATA +
Preference number: 4 (lower is better)
Translates to: SVPPLPPVPRRPAPRRLLRVSTV*SLVSRI
Trigger: TATCCGGCTCACCAGCGAGCACACGGTGGAGACCCT...AAGAAGCCGACGTGGGGCAGGCCTTCGCGGGACTGGCGGGAGCGGAGGAACGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558960.1
CDS-3UTR CCA 90 bp AGCGTTCCTCCGCTCCCGCCAGTCCCGCGAAGGCCTGCCCCACGTCGGCTTCTTAGCTGCTCAGGTCTCTaGGCCTCAGCAGAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: SVPPLPPVPRRPAPRRLLSCSGL*ASAEGL
Trigger: CAGCCCTTCTGCTGAGGCCCAGAGACCTGAGCAGCT...AAGAAGCCGACGTGGGGCAGGCCTTCGCGGGACTGGCGGGAGCGGAGGAACGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558960.1
CDS-3UTR CCA 90 bp GCTTTAGGAAGTGCAGGCCAGAGTGGATGTTCCCGGAAGGCGGGGCAGGTGCCCGCTGTCCCCCGGGCGTaGCTGAAGTCGCCCTTCACC +
Preference number: 4 (lower is better)
Translates to: ALGSAGQSGCSRKAGQVPAVPRA*LKSPFT
Trigger: GGTGAAGGGCGACTTCAGCCACGCCCGGGGGACAGC...GGGCACCTGCCCCGCCTTCCGGGAACATCCACTCTGGCCTGCACTTCCTAAAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR TCA 90 bp TGGGGGCGTGGCCACAAGGCTGGTAGGCTTGCGGGTGGGTGGGTTTCAGACCTGGGGCCCTTGCCAGGGTaGCAGTGGGCATATCTGGAG +
Preference number: 4 (lower is better)
Translates to: WGRGHKAGRLAGGWVSDLGPLPG*QWAYLE
Trigger: CTCCAGATATGCCCACTGTCACCCTGGCAAGGGCCC...CAGGTCTGAAACCCACCCACCCGCAAGCCTACCAGCCTTGTGGCCACGCCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp CATGTCGGCGTCGGCCACCACCAGGGTCTCCACCGTGTGCTCGCTGGTGAGCCGAATGAGGCCAACCTGTaGCCGGGTCCAGTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: HVGVGHHQGLHRVLAGEPNEANL*PGPVPK
Trigger: TTTGGGGACTGGACCCGGGCACAGGTTGGCCTCATT...CGGCTCACCAGCGAGCACACGGTGGAGACCCTGGTGGTGGCCGACGCCGACATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558960.1
CDS-3UTR CCA 90 bp CCGGATAGCGTTCCTCCGCTCCCGCCAGTCCCGCGAAGGCCTGCCCCACGTCGGTTCTCGTCCACTGAATaGGCCCTGGGAGTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: PDSVPPLPPVPRRPAPRRFSSTE*ALGVVE
Trigger: CTCAACAACTCCCAGGGCCCATTCAGTGGACGAGAA...CCGACGTGGGGCAGGCCTTCGCGGGACTGGCGGGAGCGGAGGAACGCTATCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558960.1
CDS-3UTR CCA 90 bp CGCCAGTCCCGCGAAGGCCTGCCCCACGTCGGCTTCTTCTTTTCTGTTAGAACCGCGGCCTCGGCCCCGTaGTACTGCACCATGTCGGCG +
Preference number: 4 (lower is better)
Translates to: RQSREGLPHVGFFFSVRTAASAP*YCTMSA
Trigger: CGCCGACATGGTGCAGTACCACGGGGCCGAGGCCGC...GGTTCTAACAGAAAAGAAGAAGCCGACGTGGGGCAGGCCTTCGCGGGACTGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558960.1
CDS-3UTR TCA 90 bp GGCCACCACCAGGGTCTCCACCGTGTGCTCGCTGGTGAGCCGGATAGCGTTCCTGGCCCTGGGAGTTGTTaGGGGGCTGGATTAGCACCT +
Preference number: 4 (lower is better)
Translates to: GHHQGLHRVLAGEPDSVPGPGSC*GAGLAP
Trigger: AGGTGCTAATCCAGCCCCTCAACAACTCCCAGGGCC...AGGAACGCTATCCGGCTCACCAGCGAGCACACGGTGGAGACCCTGGTGGTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558960.1
CDS-3UTR TCA 90 bp AGCGTTCCTCCGCTCCCGCCAGTCCCGCGAAGGCCTGCCCCACGTCGGCTTCTTGATGTTCTCGTCCACTaGATGGGCCCTGGGAGTTGT +
Preference number: 4 (lower is better)
Translates to: SVPPLPPVPRRPAPRRLLDVLVH*MGPGSC
Trigger: ACAACTCCCAGGGCCCATTCAGTGGACGAGAACATC...AAGAAGCCGACGTGGGGCAGGCCTTCGCGGGACTGGCGGGAGCGGAGGAACGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558960.1
CDS-3UTR TCA 90 bp GCTTTAGGAAGTGCAGGCCAGAGTGGATGTTCCCGGAAGGCGGGGCAGGTGCCCCACATTTCCTCTGCCTaGAGCGGGCTCCCGTCCCAC +
Preference number: 4 (lower is better)
Translates to: ALGSAGQSGCSRKAGQVPHISSA*SGLPSH
Trigger: GTGGGACGGGAGCCCGCTTCAGGCAGAGGAAATGTG...GGGCACCTGCCCCGCCTTCCGGGAACATCCACTCTGGCCTGCACTTCCTAAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR TCA 90 bp GCTTTAGGAAGTGCAGGCCAGAGTGGATGTTCCCGGAAGGCGGGGCAGGTGCCCTGCCGTGGCGCCCTGTaGCCTTGTGCATGCACTGCA +
Preference number: 4 (lower is better)
Translates to: ALGSAGQSGCSRKAGQVPCRGAL*PCACTA
Trigger: TGCAGTGCATGCACAAGGTCACAGGGCGCCACGGCA...GGGCACCTGCCCCGCCTTCCGGGAACATCCACTCTGGCCTGCACTTCCTAAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR TCA 90 bp TGGGGGCGTGGCCACAAGGCTGGTAGGCTTGCGGGTGGGTGGGTTTCAGACCTGCCCATGCGGGTGGTATaGACTGCGTGGCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: WGRGHKAGRLAGGWVSDLPMRVV*TAWHCC
Trigger: ACAGCAGTGCCACGCAGTTCATACCACCCGCATGGG...CAGGTCTGAAACCCACCCACCCGCAAGCCTACCAGCCTTGTGGCCACGCCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp GCTTTAGGAAGTGCAGGCCAGAGTGGATGTTCCCGGAAGGCGGGGCAGGTGCCCAGTCCCGCGAAGGCCTaGCCCACGTCGGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: ALGSAGQSGCSRKAGQVPSPAKA*PTSASS
Trigger: AGAAGAAGCCGACGTGGGGCAGGCCTTCGCGGGACT...GGGCACCTGCCCCGCCTTCCGGGAACATCCACTCTGGCCTGCACTTCCTAAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp GCTTTAGGAAGTGCAGGCCAGAGTGGATGTTCCCGGAAGGCGGGGCAGGTGCCCTCCCACATGTTCGGCTaGACATGCTCCAGGCGCCCC +
Preference number: 4 (lower is better)
Translates to: ALGSAGQSGCSRKAGQVPSHMFG*TCSRRP
Trigger: GGGGCGCCTGGAGCATGTGCAGCCGAACATGTGGGA...GGGCACCTGCCCCGCCTTCCGGGAACATCCACTCTGGCCTGCACTTCCTAAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp TGGGGCTACAGGAAGGCTCGGCGGGTGTGCAGCAGTGCCAGCCAGATGGCGTTCTTCATGGGAGTCTGCTaGTGGCCAGGCCTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: WGYRKARRVCSSASQMAFFMGVC*WPGLKG
Trigger: CCCCTTCAGGCCTGGCCACCAGCAGACTCCCATGAA...GAACGCCATCTGGCTGGCACTGCTGCACACCCGCCGAGCCTTCCTGTAGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR TCA 90 bp TGGGGGCGTGGCCACAAGGCTGGTAGGCTTGCGGGTGGGTGGGTTTCAGACCTGTGGCTGCAGACCCGATaGTGCCGTCACAGCCGATTT +
Preference number: 4 (lower is better)
Translates to: WGRGHKAGRLAGGWVSDLWLQTR*CRHSRF
Trigger: AAATCGGCTGTGACGGCATCATCGGGTCTGCAGCCA...CAGGTCTGAAACCCACCCACCCGCAAGCCTACCAGCCTTGTGGCCACGCCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp GGCATATCTGGAGGCCCCGGGGCCCATGCAGGAGACCAAGCTAAGGCTTCCTTACGTCGCCGACAGCTGTaGCCGGGTCCAGTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: GISGGPGAHAGDQAKASLRRRQL*PGPVPK
Trigger: TTTGGGGACTGGACCCGGGCACAGCTGTCGGCGACG...TAAGGAAGCCTTAGCTTGGTCTCCTGCATGGGCCCCGGGGCCTCCAGATATGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp TGGGGGCGTGGCCACAAGGCTGGTAGGCTTGCGGGTGGGTGGGTTTCAGACCTGCGGGAACCTGGTTATTaGCGAGGTATCGCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: WGRGHKAGRLAGGWVSDLREPGY*RGIALL
Trigger: GAGGAGCGCGATACCTCGGCAATAACCAGGTTCCCG...CAGGTCTGAAACCCACCCACCCGCAAGCCTACCAGCCTTGTGGCCACGCCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp CAGAGTGACTACACCACAGCTCTGACACCAAAGCCTTCTCTAGGCCCAATGCCCACGAGGGAGCCGGGGTaGCCGAGCACACGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: QSDYTTALTPKPSLGPMPTREPG*PSTRPE
Trigger: CTCGGGCCGTGTGCTCGGCCACCCCGGCTCCCTCGT...GGGCATTGGGCCTAGAGAAGGCTTTGGTGTCAGAGCTGTGGTGTAGTCACTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561355.2
CDS-3UTR CCA 90 bp GCTTTAGGAAGTGCAGGCCAGAGTGGATGTTCCCGGAAGGCGGGGCAGGTGCCCCCACTGAATGGGCCCTaGGAGTTGTTGAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: ALGSAGQSGCSRKAGQVPPLNGP*ELLRGW
Trigger: CCAGCCCCTCAACAACTCCCAGGGCCCATTCAGTGG...GGGCACCTGCCCCGCCTTCCGGGAACATCCACTCTGGCCTGCACTTCCTAAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp TGGGGGCGTGGCCACAAGGCTGGTAGGCTTGCGGGTGGGTGGGTTTCAGACCTGTCTGGCACTGCTCGTTaGCACTGTAGTGCATGCCCG +
Preference number: 4 (lower is better)
Translates to: WGRGHKAGRLAGGWVSDLSGTAR*HCSACP
Trigger: CGGGCATGCACTACAGTGCCAACGAGCAGTGCCAGA...CAGGTCTGAAACCCACCCACCCGCAAGCCTACCAGCCTTGTGGCCACGCCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp TGGGGGCGTGGCCACAAGGCTGGTAGGCTTGCGGGTGGGTGGGTTTCAGACCTGAGGCTTGCGGGTGGGTaGGTTTCAGACCTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: WGRGHKAGRLAGGWVSDLRLAGG*VSDLSL
Trigger: CAGACTCAGGTCTGAAACCCACCCACCCGCAAGCCT...CAGGTCTGAAACCCACCCACCCGCAAGCCTACCAGCCTTGTGGCCACGCCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR TCA 90 bp GTTCCTCCGCTCCCGCCAGTCCCGCGAAGGCCTGCCCCACGTCGGCTTCTTCTTAGGACCATTTGCGCCTaGTCAGATGTTCTCGTCCAC +
Preference number: 4 (lower is better)
Translates to: VPPLPPVPRRPAPRRLLLRTICA*SDVLVH
Trigger: GTGGACGAGAACATCTGATCAGGCGCAAATGGTCCT...AAGAAGAAGCCGACGTGGGGCAGGCCTTCGCGGGACTGGCGGGAGCGGAGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558960.1
CDS-3UTR GCA 90 bp CACAGCTCCTGCTGGGCTTGCGGGAACTCTTGCATTGGGAGCCCTGGTGGCCATAGGCAGCACAGCTCCTaGTGGGCTTGCGGGAACTCT +
Preference number: 4 (lower is better)
Translates to: HSSCWACGNSCIGSPGGHRQHSS*WACGNS
Trigger: AGAGTTCCCGCAAGCCCAGCAGGAGCTGTGCTGCCT...ATGGCCACCAGGGCTCCCAATGCAAGAGTTCCCGCAAGCCCAGCAGGAGCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561355.2
CDS-3UTR TCA 90 bp CAGAGTGACTACACCACAGCTCTGACACCAAAGCCTTCTCTAGGCCCAATGCCCCCTGCCCAAGCTGAATaGGGCCAACCAGGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: QSDYTTALTPKPSLGPMPPAQAE*GQPGRR
Trigger: CCGGCGGCCTGGTTGGCCTCATTCAGCTTGGGCAGG...GGGCATTGGGCCTAGAGAAGGCTTTGGTGTCAGAGCTGTGGTGTAGTCACTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561355.2
CDS-3UTR TCA 90 bp TGGGGCTACAGGAAGGCTCGGCGGGTGTGCAGCAGTGCCAGCCAGATGGCGTTCGTGAGACCTTCCGTCTaGAATCAGGGAGGAGGTGTT +
Preference number: 4 (lower is better)
Translates to: WGYRKARRVCSSASQMAFVRPSV*NQGGGV
Trigger: AACACCTCCTCCCTGATTTCAGACGGAAGGTCTCAC...GAACGCCATCTGGCTGGCACTGCTGCACACCCGCCGAGCCTTCCTGTAGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR TCA 90 bp GCTTTAGGAAGTGCAGGCCAGAGTGGATGTTCCCGGAAGGCGGGGCAGGTGCCCTCACTGCTCGTGCCATaGACAGAAGGTAGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: ALGSAGQSGCSRKAGQVPSLLVP*TEGRLV
Trigger: CACCAGCCTACCTTCTGTTCATGGCACGAGCAGTGA...GGGCACCTGCCCCGCCTTCCGGGAACATCCACTCTGGCCTGCACTTCCTAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR TCA 90 bp CACAGCTCCTGCTGGGCTTGCGGGAACTCTTGCATTGGGAGCCCTGGTGGCCATTGTCCAAAGCTGGGCTaGAGAGCCCCATACCCGGTA +
Preference number: 4 (lower is better)
Translates to: HSSCWACGNSCIGSPGGHCPKLG*RAPYPV
Trigger: TACCGGGTATGGGGCTCTTCAGCCCAGCTTTGGACA...ATGGCCACCAGGGCTCCCAATGCAAGAGTTCCCGCAAGCCCAGCAGGAGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561355.2
CDS-3UTR GCA 90 bp GTGAGCCGGATAGCGTTCCTCCGCTCCCGCCAGTCCCGCGAAGGCCTGCCCCACTTTCTGTTAGAACCTTaGAGAGCTGCTCAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: VSRIAFLRSRQSREGLPHFLLEP*RAAQVS
Trigger: AGAGACCTGAGCAGCTCTGCAAGGTTCTAACAGAAA...GTGGGGCAGGCCTTCGCGGGACTGGCGGGAGCGGAGGAACGCTATCCGGCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558960.1
CDS-3UTR GCA 90 bp ATGACAGGCGTGATGATAATGGGTACCACAAAGTCTGGGGCTACAGGAAGGCTCGGGAGGACAGCAGTCTaGGCAGGCCGCGGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: MTGVMIMGTTKSGATGRLGRTAV*AGRGAR
Trigger: CCTCGCCCCGCGGCCTGCGCAGACTGCTGTCCTCCC...GAGCCTTCCTGTAGCCCCAGACTTTGTGGTACCCATTATCATCACGCCTGTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp GGCATATCTGGAGGCCCCGGGGCCCATGCAGGAGACCAAGCTAAGGCTTCCTTAGCAGGCCTTTCTTCTTaGGGCTCAGCCGGTCGTGTG +
Preference number: 4 (lower is better)
Translates to: GISGGPGAHAGDQAKASLAGLSS*GSAGRV
Trigger: CACACGACCGGCTGAGCCCCAAGAAGAAAGGCCTGC...TAAGGAAGCCTTAGCTTGGTCTCCTGCATGGGCCCCGGGGCCTCCAGATATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp TGGGGCTACAGGAAGGCTCGGCGGGTGTGCAGCAGTGCCAGCCAGATGGCGTTCAGTGCAGCGGTAGTTTaGTTGGTCCCTTGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: WGYRKARRVCSSASQMAFSAAVV*LVPWQR
Trigger: TCTCTGCCAAGGGACCAACCAAACTACCGCTGCACT...GAACGCCATCTGGCTGGCACTGCTGCACACCCGCCGAGCCTTCCTGTAGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp GCTTTAGGAAGTGCAGGCCAGAGTGGATGTTCCCGGAAGGCGGGGCAGGTGCCCTCTCAGAGACGGGCATaGAGGCAACGTCCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: ALGSAGQSGCSRKAGQVPSQRRA*RQRPGS
Trigger: AGAACCAGGACGTTGCCTCCATGCCCGTCTCTGAGA...GGGCACCTGCCCCGCCTTCCGGGAACATCCACTCTGGCCTGCACTTCCTAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp GGCATATCTGGAGGCCCCGGGGCCCATGCAGGAGACCAAGCTAAGGCTTCCTTAAAGTGCAGGCCAGAGTaGATGTTCCCGGAAGGCGGG +
Preference number: 4 (lower is better)
Translates to: GISGGPGAHAGDQAKASLKCRPE*MFPEGG
Trigger: CCCGCCTTCCGGGAACATCCACTCTGGCCTGCACTT...TAAGGAAGCCTTAGCTTGGTCTCCTGCATGGGCCCCGGGGCCTCCAGATATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR TCA 90 bp TGGGGCTACAGGAAGGCTCGGCGGGTGTGCAGCAGTGCCAGCCAGATGGCGTTCATGATGTCTCTCTCTTaGCGGTTGTCTGCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: WGYRKARRVCSSASQMAFMMSLS*RLSARG
Trigger: ACCTCTGGCAGACAACCGTCAAGAGAGAGACATCAT...GAACGCCATCTGGCTGGCACTGCTGCACACCCGCCGAGCCTTCCTGTAGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp AGGACCTTCCTTCATCATGCATCATCCTTGCCCCACCAAGAAGATGGGTCAATGTTCACAGCTCTGCACTaGCGCCGGCCGGGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: RTFLHHASSLPHQEDGSMFTALH*RRPGAR
Trigger: CCGGGCCCCCGGCCGGCGGCAGTGCAGAGCTGTGAA...CATTGACCCATCTTCTTGGTGGGGCAAGGATGATGCATGATGAAGGAAGGTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp ATGACAGGCGTGATGATAATGGGTACCACAAAGTCTGGGGCTACAGGAAGGCTCTGGCCTTCACAGCTCTaGACTGCCGCCGGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: MTGVMIMGTTKSGATGRLWPSQL*TAAGRG
Trigger: CCCCCGGCCGGCGGCAGTGCAGAGCTGTGAAGGCCA...GAGCCTTCCTGTAGCCCCAGACTTTGTGGTACCCATTATCATCACGCCTGTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp TGGGGCTACAGGAAGGCTCGGCGGGTGTGCAGCAGTGCCAGCCAGATGGCGTTCGGAACATTCTTCCCATaGGGGTGGTATGAACTGCGT +
Preference number: 4 (lower is better)
Translates to: WGYRKARRVCSSASQMAFGTFFP*GWYELR
Trigger: ACGCAGTTCATACCACCCGCATGGGAAGAATGTTCC...GAACGCCATCTGGCTGGCACTGCTGCACACCCGCCGAGCCTTCCTGTAGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp GCATCTCTAAGGTACAAAGCTTTAGGAAGTGCAGGCCAGAGTGGATGTTCCCGGGGGCGCCGTCACACATaGTACCCGGGACCGGCAGCC +
Preference number: 4 (lower is better)
Translates to: ASLRYKALGSAGQSGCSRGRRHT*YPGPAA
Trigger: GGCTGCCGGTCCCGGGTACCATGTGTGACGGCGCCC...CCGGGAACATCCACTCTGGCCTGCACTTCCTAAAGCTTTGTACCTTAGAGATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR TCA 90 bp GCATCTCTAAGGTACAAAGCTTTAGGAAGTGCAGGCCAGAGTGGATGTTCCCGGCCTGCCCAAGCTGAATaGGGCCAACCAGGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: ASLRYKALGSAGQSGCSRPAQAE*GQPGRR
Trigger: CCGGCGGCCTGGTTGGCCTCATTCAGCTTGGGCAGG...CCGGGAACATCCACTCTGGCCTGCACTTCCTAAAGCTTTGTACCTTAGAGATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR TCA 90 bp TGGGGCTACAGGAAGGCTCGGCGGGTGTGCAGCAGTGCCAGCCAGATGGCGTTCTGGACAGCAGAGCTCTaGAAATTAGATGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: WGYRKARRVCSSASQMAFWTAEL*KLDASP
Trigger: TGGGGAAGCATCTAATTTTCAGAGCTCTGCTGTCCA...GAACGCCATCTGGCTGGCACTGCTGCACACCCGCCGAGCCTTCCTGTAGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR TCA 90 bp CAGACTCTCTTGGAACATTCTTCCCATGCGGGTGGTATGAACTGCGTGGCACTGGCTGGTGGCCAGGCCTaGAGGGGAGGACAGCAGTCT +
Preference number: 4 (lower is better)
Translates to: QTLLEHSSHAGGMNCVALAGGQA*RGGQQS
Trigger: AGACTGCTGTCCTCCCCTTCAGGCCTGGCCACCAGC...CAGTGCCACGCAGTTCATACCACCCGCATGGGAAGAATGTTCCAAGAGAGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp GGCATATCTGGAGGCCCCGGGGCCCATGCAGGAGACCAAGCTAAGGCTTCCTTACATCGTCGTGGTTCATaGCCAAGTTGTGGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: GISGGPGAHAGDQAKASLHRRGS*PSCGPA
Trigger: AGCTGGGCCACAACTTGGGCATGAACCACGACGATG...TAAGGAAGCCTTAGCTTGGTCTCCTGCATGGGCCCCGGGGCCTCCAGATATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp TGGGGGCGTGGCCACAAGGCTGGTAGGCTTGCGGGTGGGTGGGTTTCAGACCTGATCATGCATCATCCTTaGCCCACCAAGAAGATGGGT +
Preference number: 4 (lower is better)
Translates to: WGRGHKAGRLAGGWVSDLIMHHP*PTKKMG
Trigger: ACCCATCTTCTTGGTGGGGCAAGGATGATGCATGAT...CAGGTCTGAAACCCACCCACCCGCAAGCCTACCAGCCTTGTGGCCACGCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp GGCATATCTGGAGGCCCCGGGGCCCATGCAGGAGACCAAGCTAAGGCTTCCTTAGAGTTGTTGAGGGGCTaGATTAGCACCTGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GISGGPGAHAGDQAKASLELLRG*ISTCSC
Trigger: GCAGGAGCAGGTGCTAATCCAGCCCCTCAACAACTC...TAAGGAAGCCTTAGCTTGGTCTCCTGCATGGGCCCCGGGGCCTCCAGATATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp GCATCTCTAAGGTACAAAGCTTTAGGAAGTGCAGGCCAGAGTGGATGTTCCCGGGGGCACTCGCTGCCGTaGCGCCCTGTGACCTTGTGC +
Preference number: 4 (lower is better)
Translates to: ASLRYKALGSAGQSGCSRGHSLP*RPVTLC
Trigger: GCACAAGGTCACAGGGCGCCACGGCAGCGAGTGCCC...CCGGGAACATCCACTCTGGCCTGCACTTCCTAAAGCTTTGTACCTTAGAGATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp CCAAGGTATGGACGCCAAGCTGCAGAGGCCACAGGTAGACGCTCCACGTTGTTGTCTGCCACCAAGGTATaGACGCCAAGCTGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: PRYGRQAAEATGRRSTLLSATKV*TPSCRG
Trigger: GCCTCTGCAGCTTGGCGTCCATACCTTGGTGGCAGA...CAACAACGTGGAGCGTCTACCTGTGGCCTCTGCAGCTTGGCGTCCATACCTTGG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561355.2
CDS-3UTR TCA 90 bp GATCCTCAAAGGCAGCACAGCTCCTGCTGGGCTTGCGGGAACTCTTGCATTGGGGATGTTCTCGTCCACTaGATGGGCCCTGGGAGTTGT +
Preference number: 4 (lower is better)
Translates to: DPQRQHSSCWACGNSCIGDVLVH*MGPGSC
Trigger: ACAACTCCCAGGGCCCATTCAGTGGACGAGAACATC...CCCAATGCAAGAGTTCCCGCAAGCCCAGCAGGAGCTGTGCTGCCTTTGAGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561355.2
CDS-3UTR TCA 90 bp GCATCTCTAAGGTACAAAGCTTTAGGAAGTGCAGGCCAGAGTGGATGTTCCCGGGCCCATCCGCCCCAGTaGAGCTGGCCCAAGCTTACC +
Preference number: 4 (lower is better)
Translates to: ASLRYKALGSAGQSGCSRAHPPQ*SWPKLT
Trigger: GGTAAGCTTGGGCCAGCTTCACTGGGGCGGATGGGC...CCGGGAACATCCACTCTGGCCTGCACTTCCTAAAGCTTTGTACCTTAGAGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR TCA 90 bp CTGCCACCAAGGTATGGACGCCAAGCTGCAGAGGCCACAGGTAGACGCTCCACGCCCAATGCCCACAGTTaGTGCACACCAATGTCCAAA +
Preference number: 4 (lower is better)
Translates to: LPPRYGRQAAEATGRRSTPNAHS*CTPMSK
Trigger: TTTGGACATTGGTGTGCATCAACTGTGGGCATTGGG...CGTGGAGCGTCTACCTGTGGCCTCTGCAGCTTGGCGTCCATACCTTGGTGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561355.2
CDS-3UTR GCA 90 bp GCATCTCTAAGGTACAAAGCTTTAGGAAGTGCAGGCCAGAGTGGATGTTCCCGGATGTTCGGCTGCACATaGTCCAGGCGCCCCACGGGC +
Preference number: 4 (lower is better)
Translates to: ASLRYKALGSAGQSGCSRMFGCT*SRRPTG
Trigger: GCCCGTGGGGCGCCTGGAGCATGTGCAGCCGAACAT...CCGGGAACATCCACTCTGGCCTGCACTTCCTAAAGCTTTGTACCTTAGAGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp AGGACCTTCCTTCATCATGCATCATCCTTGCCCCACCAAGAAGATGGGTCAATGGGAAGGCGGGGCAGGTaGCCATCCGCCCCAGTGAAG +
Preference number: 4 (lower is better)
Translates to: RTFLHHASSLPHQEDGSMGRRGR*PSAPVK
Trigger: CTTCACTGGGGCGGATGGGCACCTGCCCCGCCTTCC...CATTGACCCATCTTCTTGGTGGGGCAAGGATGATGCATGATGAAGGAAGGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp GCTTTAGGAAGTGCAGGCCAGAGTGGATGTTCCCGGAAGGCGGGGCAGGTGCCCCAAAGCTTTAGGAAGTaGAGGCCAGAGTGGATGTTC +
Preference number: 4 (lower is better)
Translates to: ALGSAGQSGCSRKAGQVPQSFRK*RPEWMF
Trigger: GAACATCCACTCTGGCCTGCACTTCCTAAAGCTTTG...GGGCACCTGCCCCGCCTTCCGGGAACATCCACTCTGGCCTGCACTTCCTAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp CTGTCTCTGATCCCTCTGCACAGTAGCCCTTTGTCACTAGCGGTGTCACCTACCGCTTGCGGGAACTCTTaGATTGGGAGCCCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: LSLIPLHSSPLSLAVSPTACGNS*IGSPGG
Trigger: GCCACCAGGGCTCCCAATGCAAGAGTTCCCGCAAGC...GGTAGGTGACACCGCTAGTGACAAAGGGCTACTGTGCAGAGGGATCAGAGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561355.2
CDS-3UTR CCA 90 bp GCCAAGCTGCAGAGGCCACAGGTAGACGCTCCACGTTGTTGTCCTTGTCTTCAAAGCTGCTCAGGTCTCTaGGCCTCAGCAGAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: AKLQRPQVDAPRCCPCLQSCSGL*ASAEGL
Trigger: CAGCCCTTCTGCTGAGGCCCAGAGACCTGAGCAGCT...TTGAAGACAAGGACAACAACGTGGAGCGTCTACCTGTGGCCTCTGCAGCTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561355.2
CDS-3UTR CCA 90 bp GGCATATCTGGAGGCCCCGGGGCCCATGCAGGAGACCAAGCTAAGGCTTCCTTAATTTCCCTTGTGAGTTaGTGCACGCCACGGTCCGTT +
Preference number: 4 (lower is better)
Translates to: GISGGPGAHAGDQAKASLISLVS*CTPRSV
Trigger: AACGGACCGTGGCGTGCACCAACTCACAAGGGAAAT...TAAGGAAGCCTTAGCTTGGTCTCCTGCATGGGCCCCGGGGCCTCCAGATATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp GCTTTAGGAAGTGCAGGCCAGAGTGGATGTTCCCGGAAGGCGGGGCAGGTGCCCAAACCCAGACTCTCTTaGAACATTCTTCCCATGCGG +
Preference number: 4 (lower is better)
Translates to: ALGSAGQSGCSRKAGQVPKPRLS*NILPMR
Trigger: CCGCATGGGAAGAATGTTCCAAGAGAGTCTGGGTTT...GGGCACCTGCCCCGCCTTCCGGGAACATCCACTCTGGCCTGCACTTCCTAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR TCA 90 bp GGCATATCTGGAGGCCCCGGGGCCCATGCAGGAGACCAAGCTAAGGCTTCCTTACCAGCAACGGTCAGCTaGGAGGGTTTAATTTTGCAC +
Preference number: 4 (lower is better)
Translates to: GISGGPGAHAGDQAKASLPATVS*EGLILH
Trigger: GTGCAAAATTAAACCCTCTCAGCTGACCGTTGCTGG...TAAGGAAGCCTTAGCTTGGTCTCCTGCATGGGCCCCGGGGCCTCCAGATATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp TCCATGGTGTCGCCGGCTTTCAGAATAAAGCCTTTTCTAGCATGTCTCGTTTTGCCGAAGGCCGGCAGGTaGAGCAGCAGGGCGCGCTCT +
Preference number: 4 (lower is better)
Translates to: SMVSPAFRIKPFLACLVLPKAGR*SSRARS
Trigger: AGAGCGCGCCCTGCTGCTGCACCTGCCGGCCTTCGG...CAAAACGAGACATGCTAGAAAAGGCTTTATTCTGAAAGCCGGCGACACCATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp GCTTTAGGAAGTGCAGGCCAGAGTGGATGTTCCCGGAAGGCGGGGCAGGTGCCCTTTCTGTTAGAACCTTaGAGAGCTGCTCAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: ALGSAGQSGCSRKAGQVPFLLEP*RAAQVS
Trigger: AGAGACCTGAGCAGCTCTGCAAGGTTCTAACAGAAA...GGGCACCTGCCCCGCCTTCCGGGAACATCCACTCTGGCCTGCACTTCCTAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp CCCCAGGCTCTGGTGCTGAAACATATTGTATACCATGTTCATGACGGTCAGGATTCGGCCCCGTGGTACTaGACCATGTCGGCGTCGGCC +
Preference number: 4 (lower is better)
Translates to: PQALVLKHIVYHVHDGQDSAPWY*TMSASA
Trigger: GGCCGACGCCGACATGGTGCAGTACCACGGGGCCGA...ATCCTGACCGTCATGAACATGGTATACAATATGTTTCAGCACCAGAGCCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558960.1
CDS-3UTR GCA 90 bp CTTTGCCTTAGGAAGCAACCCCATCACCGCAATTACCGTTTCTTATGTCACAGCGCTCAGCCGGTCGTGTaGCTGGCACTGCTGGTCCCG +
Preference number: 4 (lower is better)
Translates to: LCLRKQPHHRNYRFLCHSAQPVV*LALLVP
Trigger: CGGGACCAGCAGTGCCAGGCACACGACCGGCTGAGC...GCTGTGACATAAGAAACGGTAATTGCGGTGATGGGGTTGCTTCCTAAGGCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp CTGACACCCTCGGTTCTTTCCACAGAGCACCCACGGAAGTTTCTCAACACTTCTTCTTGCCGTCCCCGCTaGAGACCCCGCATCTGTCCT +
Preference number: 4 (lower is better)
Translates to: LTPSVLSTEHPRKFLNTSSCRPR*RPRICP
Trigger: AGGACAGATGCGGGGTCTGCAGCGGGGACGGCAAGA...AGAAGTGTTGAGAAACTTCCGTGGGTGCTCTGTGGAAAGAACCGAGGGTGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp AGTGACACGTGTGCAAGCACAAAGGTACAGTACTCGAGGGACAGTACAGGGTATCCAAGTGGCAGGTCTTaGCGTCCCCGCTGCAGACCC +
Preference number: 4 (lower is better)
Translates to: SDTCASTKVQYSRDSTGYPSGRS*RPRCRP
Trigger: GGGTCTGCAGCGGGGACGGCAAGACCTGCCACTTGG...ATACCCTGTACTGTCCCTCGAGTACTGTACCTTTGTGCTTGCACACGTGTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp AGTGACACGTGTGCAAGCACAAAGGTACAGTACTCGAGGGACAGTACAGGGTATTCCCCTCCGCCGCACTaGACACTGCACCCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: SDTCASTKVQYSRDSTGYSPPPH*TLHPSQ
Trigger: CTGGGAAGGGTGCAGTGTGCAGTGCGGCGGAGGGGA...ATACCCTGTACTGTCCCTCGAGTACTGTACCTTTGTGCTTGCACACGTGTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp TGGGGGCGTGGCCACAAGGCTGGTAGGCTTGCGGGTGGGTGGGTTTCAGACCTGACACAGAAACATCACTaGTGTGATCAGCATCTAGTG +
Preference number: 4 (lower is better)
Translates to: WGRGHKAGRLAGGWVSDLTQKHH*CDQHLV
Trigger: CACTAGATGCTGATCACAGCAGTGATGTTTCTGTGT...CAGGTCTGAAACCCACCCACCCGCAAGCCTACCAGCCTTGTGGCCACGCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp TTCTCTGCCTCTAGGGTAGTAAAAACAAAAACACAGCTCGTAAGACAGGGTGGAACGAGGGAGCCGGGGTaGCCGAGCACACGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: FSASRVVKTKTQLVRQGGTREPG*PSTRPE
Trigger: CTCGGGCCGTGTGCTCGGCCACCCCGGCTCCCTCGT...TCCACCCTGTCTTACGAGCTGTGTTTTTGTTTTTACTACCCTAGAGGCAGAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp TCCAAAGCTGGGCTGAAGAGCCCCATACCCGGTATGCTGTCTCTGAACTATGGACCACTGAATGGGCCCTaGGAGTTGTTGAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SKAGLKSPIPGMLSLNYGPLNGP*ELLRGW
Trigger: CCAGCCCCTCAACAACTCCCAGGGCCCATTCAGTGG...TCCATAGTTCAGAGACAGCATACCGGGTATGGGGCTCTTCAGCCCAGCTTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561355.2
CDS-3UTR CCA 90 bp CTTTGCCTTAGGAAGCAACCCCATCACCGCAATTACCGTTTCTTATGTCACAGCGTCAGGATGAACCTCTaGGCGGCCTCGGCCCCGTGG +
Preference number: 4 (lower is better)
Translates to: LCLRKQPHHRNYRFLCHSVRMNL*AASAPW
Trigger: CCACGGGGCCGAGGCCGCCCAGAGGTTCATCCTGAC...GCTGTGACATAAGAAACGGTAATTGCGGTGATGGGGTTGCTTCCTAAGGCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp CTTAGGAAGCAACCCCATCACCGCAATTACCGTTTCTTATGTCACAGCACCTTGGCTGGTCCCGGAAGCTaGGCAGACCCTTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LRKQPHHRNYRFLCHSTLAGPGS*ADPWGR
Trigger: CCTGCCCCAAGGGTCTGCCCAGCTTCCGGGACCAGC...CAAGGTGCTGTGACATAAGAAACGGTAATTGCGGTGATGGGGTTGCTTCCTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp CTGACACCCTCGGTTCTTTCCACAGAGCACCCACGGAAGTTTCTCAACACTTCTTGTGCCTGGCACTGCTaGTCCCGGAAGCTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: LTPSVLSTEHPRKFLNTSCAWHC*SRKLGR
Trigger: TCTGCCCAGCTTCCGGGACCAGCAGTGCCAGGCACA...AGAAGTGTTGAGAAACTTCCGTGGGTGCTCTGTGGAAAGAACCGAGGGTGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp AGGACCTTCCTTCATCATGCATCATCCTTGCCCCACCAAGAAGATGGGTCAATGAGCCGGTCGTGTGCCTaGCACTGCTGGTCCCGGAAG +
Preference number: 4 (lower is better)
Translates to: RTFLHHASSLPHQEDGSMSRSCA*HCWSRK
Trigger: CTTCCGGGACCAGCAGTGCCAGGCACACGACCGGCT...CATTGACCCATCTTCTTGGTGGGGCAAGGATGATGCATGATGAAGGAAGGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp CTGACACCCTCGGTTCTTTCCACAGAGCACCCACGGAAGTTTCTCAACACTTCTTCGCCCTTCACCAAGTaGCAGGTCTTGCCGTCCCCG +
Preference number: 4 (lower is better)
Translates to: LTPSVLSTEHPRKFLNTSSPFTK*QVLPSP
Trigger: CGGGGACGGCAAGACCTGCCACTTGGTGAAGGGCGA...AGAAGTGTTGAGAAACTTCCGTGGGTGCTCTGTGGAAAGAACCGAGGGTGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp TCCTCAGAGGTCCCAAATGTCGTCTTACCTTCAGATAAATGGCCACGGTCGGTATCGGACCTGGGGCTCTaGGCGGCTTGCTTGAGGGCA +
Preference number: 4 (lower is better)
Translates to: SSEVPNVVLPSDKWPRSVSDLGL*AACLRA
Trigger: TGCCCTCAAGCAAGCCGCCCAGAGCCCCAGGTCCGA...TACCGACCGTGGCCATTTATCTGAAGGTAAGACGACATTTGGGACCTCTGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp ATCCTAGGCCTGGGCTTGTGTCCTCAGAGGTCCCAAATGTCGTCTTACCTTCAGGCAAAACAGGCCTCCTaGCATCTAGGGTCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: ILGLGLCPQRSQMSSYLQAKQAS*HLGSLP
Trigger: GGGCAGGGACCCTAGATGCCAGGAGGCCTGTTTTGC...CTGAAGGTAAGACGACATTTGGGACCTCTGAGGACACAAGCCCAGGCCTAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR CAA 72 bp AGCACAGCTCCTGCTGGGCTTGCGGGAACTCTTGCATaGGGAGCCCTGGTGGCCATAGAAGAAGTATGTCTG +
Preference number: 4 (lower is better)
Translates to: STAPAGLAGTLA*GALVAIEEVCL
Trigger: CAGACATACTTCTTCTATGGCCACCAGGGCTCCCAATGCAAGAGTTCCCGCAAGCCCAGCAGGAGCTGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561355.2
CDS-3UTR TCA 90 bp GGCATATCTGGAGGCCCCGGGGCCCATGCAGGAGACCAAGCTAAGGCTTCCTTACCCAGGCTCTGGTGCTaGAACATATTGTATACCATG +
Preference number: 4 (lower is better)
Translates to: GISGGPGAHAGDQAKASLPRLWC*NILYTM
Trigger: CATGGTATACAATATGTTTCAGCACCAGAGCCTGGG...TAAGGAAGCCTTAGCTTGGTCTCCTGCATGGGCCCCGGGGCCTCCAGATATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR TCA 90 bp CTTTGCCTTAGGAAGCAACCCCATCACCGCAATTACCGTTTCTTATGTCACAGCTCCCCCGGGCGTGGCTaGAGTCGCCCTTCACCAAGT +
Preference number: 4 (lower is better)
Translates to: LCLRKQPHHRNYRFLCHSSPGRG*SRPSPS
Trigger: ACTTGGTGAAGGGCGACTTCAGCCACGCCCGGGGGA...GCTGTGACATAAGAAACGGTAATTGCGGTGATGGGGTTGCTTCCTAAGGCAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR TCA 90 bp GGCATATCTGGAGGCCCCGGGGCCCATGCAGGAGACCAAGCTAAGGCTTCCTTAGAGTTGTGGTCTTGTTaGCAATCCGTGTACACGAGA +
Preference number: 4 (lower is better)
Translates to: GISGGPGAHAGDQAKASLELWSC*QSVYTR
Trigger: TCTCGTGTACACGGATTGTCAACAAGACCACAACTC...TAAGGAAGCCTTAGCTTGGTCTCCTGCATGGGCCCCGGGGCCTCCAGATATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR TCA 90 bp CTGACACCCTCGGTTCTTTCCACAGAGCACCCACGGAAGTTTCTCAACACTTCTTCTGGGCGGCTTGCTTaGGGGCAGTCACTGTCGTTC +
Preference number: 4 (lower is better)
Translates to: LTPSVLSTEHPRKFLNTSSGRLA*GQSLSF
Trigger: GAACGACAGTGACTGCCCTCAAGCAAGCCGCCCAGA...AGAAGTGTTGAGAAACTTCCGTGGGTGCTCTGTGGAAAGAACCGAGGGTGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR TCA 90 bp CTTAGGAAGCAACCCCATCACCGCAATTACCGTTTCTTATGTCACAGCACCTTGGCCTGCCACCCACCGTaGCTGGCAGGGGTGCAAGTT +
Preference number: 4 (lower is better)
Translates to: LRKQPHHRNYRFLCHSTLACHPP*LAGVQV
Trigger: AACTTGCACCCCTGCCAGTCACGGTGGGTGGCAGGC...CAAGGTGCTGTGACATAAGAAACGGTAATTGCGGTGATGGGGTTGCTTCCTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp ATGACAGGCGTGATGATAATGGGTACCACAAAGTCTGGGGCTACAGGAAGGCTCAGGGTCTCCACCGTGTaGTCGCTGGTGAGCCGGATA +
Preference number: 4 (lower is better)
Translates to: MTGVMIMGTTKSGATGRLRVSTV*SLVSRI
Trigger: TATCCGGCTCACCAGCGAGCACACGGTGGAGACCCT...GAGCCTTCCTGTAGCCCCAGACTTTGTGGTACCCATTATCATCACGCCTGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp AAGCAACCCCATCACCGCAATTACCGTTTCTTATGTCACAGCACCTTGAAGAGATCGGCCCCGTGGTACTaGACCATGTCGGCGTCGGCC +
Preference number: 4 (lower is better)
Translates to: KQPHHRNYRFLCHSTLKRSAPWY*TMSASA
Trigger: GGCCGACGCCGACATGGTGCAGTACCACGGGGCCGA...TCTCTTCAAGGTGCTGTGACATAAGAAACGGTAATTGCGGTGATGGGGTTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp CTGACACCCTCGGTTCTTTCCACAGAGCACCCACGGAAGTTTCTCAACACTTCTCAGTCTCCGTCCACATaGTCCGGGATGGGCGTCTTG +
Preference number: 4 (lower is better)
Translates to: LTPSVLSTEHPRKFLNTSQSPST*SGMGVL
Trigger: CAAGACGCCCATCCCGGAGCATGTGGACGGAGACTG...AGAAGTGTTGAGAAACTTCCGTGGGTGCTCTGTGGAAAGAACCGAGGGTGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp GCCTCTAGGGTAGTAAAAACAAAAACACAGCTCGTAAGACAGGGTGGAGAAGGCCGCCGCACTGCACACTaGACCCTTCCCAGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: ASRVVKTKTQLVRQGGEGRRTAH*TLPSRC
Trigger: ACAGCGGCTGGGAAGGGTGCAGTGTGCAGTGCGGCG...GCCTTCTCCACCCTGTCTTACGAGCTGTGTTTTTGTTTTTACTACCCTAGAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp AGTGACACGTGTGCAAGCACAAAGGTACAGTACTCGAGGGACAGTACAGGGTATACGAGACGATGGTTCTaGGCTCCCCTCCGCCGCACT +
Preference number: 4 (lower is better)
Translates to: SDTCASTKVQYSRDSTGYTRRWF*APLRRT
Trigger: AGTGCGGCGGAGGGGAGCGCAGAACCATCGTCTCGT...ATACCCTGTACTGTCCCTCGAGTACTGTACCTTTGTGCTTGCACACGTGTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp AGGACCTTCCTTCATCATGCATCATCCTTGCCCCACCAAGAAGATGGGTCAATGAGGGTGTGGGGCCCTTaGCAGGGTGACAGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: RTFLHHASSLPHQEDGSMRVWGP*QGDSGH
Trigger: ATGCCCACTGTCACCCTGGCAAGGGCCCCACACCCT...CATTGACCCATCTTCTTGGTGGGGCAAGGATGATGCATGATGAAGGAAGGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp CTGCCACCAAGGTATGGACGCCAAGCTGCAGAGGCCACAGGTAGACGCTCCACGCTGAACTATGGAATATaGTCTCTCCTCGAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: LPPRYGRQAAEATGRRSTLNYGI*SLLELS
Trigger: AGACAGCTCGAGGAGAGAGCATATTCCATAGTTCAG...CGTGGAGCGTCTACCTGTGGCCTCTGCAGCTTGGCGTCCATACCTTGGTGGCAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561355.2
CDS-3UTR CCA 90 bp TTGATGCACACCAATGTCCAAAGCTGGGCTGAAGAGCCCCATACCCGGTATGCTCCTCAGCAGAAGGGCTaGGGGTCAAGGACCATTTGC +
Preference number: 4 (lower is better)
Translates to: LMHTNVQSWAEEPHTRYAPQQKG*GSRTIC
Trigger: GCAAATGGTCCTTGACCCCCAGCCCTTCTGCTGAGG...AGCATACCGGGTATGGGGCTCTTCAGCCCAGCTTTGGACATTGGTGTGCATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561355.2
CDS-3UTR CCA 90 bp GCATCTCTAAGGTACAAAGCTTTAGGAAGTGCAGGCCAGAGTGGATGTTCCCGGAGCTGCTCAGGTCTCTaGGCCTCAGCAGAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: ASLRYKALGSAGQSGCSRSCSGL*ASAEGL
Trigger: CAGCCCTTCTGCTGAGGCCCAGAGACCTGAGCAGCT...CCGGGAACATCCACTCTGGCCTGCACTTCCTAAAGCTTTGTACCTTAGAGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp ATCCTAGGCCTGGGCTTGTGTCCTCAGAGGTCCCAAATGTCGTCTTACCTTCAGTTCCCGCCGGGAACCTaGTTATTGCCGAGGTATCGC +
Preference number: 4 (lower is better)
Translates to: ILGLGLCPQRSQMSSYLQFPPGT*LLPRYR
Trigger: GCGATACCTCGGCAATAACCAGGTTCCCGGCGGGAA...CTGAAGGTAAGACGACATTTGGGACCTCTGAGGACACAAGCCCAGGCCTAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp GCATCTCTAAGGTACAAAGCTTTAGGAAGTGCAGGCCAGAGTGGATGTTCCCGGCCACATGCTCCGGGATaGGCGTCTTGCTCACGCACT +
Preference number: 4 (lower is better)
Translates to: ASLRYKALGSAGQSGCSRPHAPG*ASCSRT
Trigger: AGTGCGTGAGCAAGACGCCCATCCCGGAGCATGTGG...CCGGGAACATCCACTCTGGCCTGCACTTCCTAAAGCTTTGTACCTTAGAGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp ATGACAGGCGTGATGATAATGGGTACCACAAAGTCTGGGGCTACAGGAAGGCTCCCGCATGTTCTACACTaGCACCCGGGCAGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: MTGVMIMGTTKSGATGRLPHVLH*HPGSVC
Trigger: GCACACACTGCCCGGGTGCCAGTGTAGAACATGCGG...GAGCCTTCCTGTAGCCCCAGACTTTGTGGTACCCATTATCATCACGCCTGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp AGTGACACGTGTGCAAGCACAAAGGTACAGTACTCGAGGGACAGTACAGGGTATGCCACCCACCGTGACTaGCAGGGGTGCAAGTTGCAC +
Preference number: 4 (lower is better)
Translates to: SDTCASTKVQYSRDSTGYATHRD*QGCKLH
Trigger: GTGCAACTTGCACCCCTGCCAGTCACGGTGGGTGGC...ATACCCTGTACTGTCCCTCGAGTACTGTACCTTTGTGCTTGCACACGTGTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp CAGACTCTCTTGGAACATTCTTCCCATGCGGGTGGTATGAACTGCGTGGCACTGGTCACCTCCCGGTGCTaGAAGCCTTTCTCACAGGTC +
Preference number: 4 (lower is better)
Translates to: QTLLEHSSHAGGMNCVALVTSRC*KPFSQV
Trigger: GACCTGTGAGAAAGGCTTCCAGCACCGGGAGGTGAC...CAGTGCCACGCAGTTCATACCACCCGCATGGGAAGAATGTTCCAAGAGAGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp CTGACACCCTCGGTTCTTTCCACAGAGCACCCACGGAAGTTTCTCAACACTTCTCAGACGCCTCCCAGATaGACAGGCAGTCCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: LTPSVLSTEHPRKFLNTSQTPPR*TGSPGL
Trigger: AAGGCCAGGACTGCCTGTCCATCTGGGAGGCGTCTG...AGAAGTGTTGAGAAACTTCCGTGGGTGCTCTGTGGAAAGAACCGAGGGTGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp CAGACTCTCTTGGAACATTCTTCCCATGCGGGTGGTATGAACTGCGTGGCACTGTCACGAGTTCGGCGGTaGCTGGCGCATCTTGTTTGC +
Preference number: 4 (lower is better)
Translates to: QTLLEHSSHAGGMNCVALSRVRR*LAHLVC
Trigger: GCAAACAAGATGCGCCAGCCACCGCCGAACTCGTGA...CAGTGCCACGCAGTTCATACCACCCGCATGGGAAGAATGTTCCAAGAGAGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp ATGACAGGCGTGATGATAATGGGTACCACAAAGTCTGGGGCTACAGGAAGGCTCGTAGTTGGATTCTTGTaGCAGCCGGGTGGGGGCGTG +
Preference number: 4 (lower is better)
Translates to: MTGVMIMGTTKSGATGRLVVGFL*QPGGGV
Trigger: CACGCCCCCACCCGGCTGCCACAAGAATCCAACTAC...GAGCCTTCCTGTAGCCCCAGACTTTGTGGTACCCATTATCATCACGCCTGTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp GCATCTCTAAGGTACAAAGCTTTAGGAAGTGCAGGCCAGAGTGGATGTTCCCGGTTCCTCCCCTGGTCCTaGCACATCAGGCTGCTCCGT +
Preference number: 4 (lower is better)
Translates to: ASLRYKALGSAGQSGCSRFLPWS*HIRLLR
Trigger: ACGGAGCAGCCTGATGTGCCAGGACCAGGGGAGGAA...CCGGGAACATCCACTCTGGCCTGCACTTCCTAAAGCTTTGTACCTTAGAGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp AGGACCTTCCTTCATCATGCATCATCCTTGCCCCACCAAGAAGATGGGTCAATGGCAGTGCCAGCCAGATaGCGTTCCTCCCCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: RTFLHHASSLPHQEDGSMAVPAR*RSSPGP
Trigger: AGGACCAGGGGAGGAACGCCATCTGGCTGGCACTGC...CATTGACCCATCTTCTTGGTGGGGCAAGGATGATGCATGATGAAGGAAGGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp CAGACTCTCTTGGAACATTCTTCCCATGCGGGTGGTATGAACTGCGTGGCACTGTTCATTCTGAGGGTGTaGGGCCCTTGCCAGGGTGAC +
Preference number: 4 (lower is better)
Translates to: QTLLEHSSHAGGMNCVALFILRV*GPCQGD
Trigger: GTCACCCTGGCAAGGGCCCCACACCCTCAGAATGAA...CAGTGCCACGCAGTTCATACCACCCGCATGGGAAGAATGTTCCAAGAGAGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp CTGCCACCAAGGTATGGACGCCAAGCTGCAGAGGCCACAGGTAGACGCTCCACGGCTGTCTCTGAACTATaGAATATGCTCTCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: LPPRYGRQAAEATGRRSTAVSEL*NMLSPR
Trigger: TCGAGGAGAGAGCATATTCCATAGTTCAGAGACAGC...CGTGGAGCGTCTACCTGTGGCCTCTGCAGCTTGGCGTCCATACCTTGGTGGCAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561355.2
CDS-3UTR TCA 90 bp AGGACCTTCCTTCATCATGCATCATCCTTGCCCCACCAAGAAGATGGGTCAATGGGCCCTGGGAGTTGTTaGGGGGCTGGATTAGCACCT +
Preference number: 4 (lower is better)
Translates to: RTFLHHASSLPHQEDGSMGPGSC*GAGLAP
Trigger: AGGTGCTAATCCAGCCCCTCAACAACTCCCAGGGCC...CATTGACCCATCTTCTTGGTGGGGCAAGGATGATGCATGATGAAGGAAGGTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR TCA 90 bp CTTAGGAAGCAACCCCATCACCGCAATTACCGTTTCTTATGTCACAGCACCTTGCCACTCGTAGCAGCCTaGGTAGTCCTCGCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: LRKQPHHRNYRFLCHSTLPLVAA*VVLAGL
Trigger: GAGGCCTGCGAGGACTACTCAGGCTGCTACGAGTGG...CAAGGTGCTGTGACATAAGAAACGGTAATTGCGGTGATGGGGTTGCTTCCTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR TCA 90 bp TGGGGGCGTGGCCACAAGGCTGGTAGGCTTGCGGGTGGGTGGGTTTCAGACCTGCTAACTCTACGGTTGTaGCATGTAACAAAACAAAAC +
Preference number: 4 (lower is better)
Translates to: WGRGHKAGRLAGGWVSDLLTLRL*HVTKQN
Trigger: GTTTTGTTTTGTTACATGTCACAACCGTAGAGTTAG...CAGGTCTGAAACCCACCCACCCGCAAGCCTACCAGCCTTGTGGCCACGCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR TCA 90 bp ACACCAAAGCCTTCTCTAGGCCCAATGCCCACAGTTGATGCACACCAATGTCCATCAAGTCCTCCCAGGTaGGGCCCAGACACTGTGGAA +
Preference number: 4 (lower is better)
Translates to: TPKPSLGPMPTVDAHQCPSSPPR*GPDTVE
Trigger: TTCCACAGTGTCTGGGCCTCACCTGGGAGGACTTGA...TGGACATTGGTGTGCATCAACTGTGGGCATTGGGCCTAGAGAAGGCTTTGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561355.2
CDS-3UTR GCA 90 bp CAGACTCTCTTGGAACATTCTTCCCATGCGGGTGGTATGAACTGCGTGGCACTGCAAGGTCATCTCGGCTaGAGGAGGACCAAGAGAGGT +
Preference number: 4 (lower is better)
Translates to: QTLLEHSSHAGGMNCVALQGHLG*RRTKRG
Trigger: ACCTCTCTTGGTCCTCCTGCAGCCGAGATGACCTTG...CAGTGCCACGCAGTTCATACCACCCGCATGGGAAGAATGTTCCAAGAGAGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp CTTTGCCTTAGGAAGCAACCCCATCACCGCAATTACCGTTTCTTATGTCACAGCATGCCCGGCAGCTTGTaGGGGAGGCGTACTGTGTGC +
Preference number: 4 (lower is better)
Translates to: LCLRKQPHHRNYRFLCHSMPGSL*GRRTVC
Trigger: GCACACAGTACGCCTCCCGCACAAGCTGCCGGGCAT...GCTGTGACATAAGAAACGGTAATTGCGGTGATGGGGTTGCTTCCTAAGGCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp TCCATGGTGTCGCCGGCTTTCAGAATAAAGCCTTTTCTAGCATGTCTCGTTTTGCTGCCCCACACTCGGTaGCATCCAGGGGAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: SMVSPAFRIKPFLACLVLLPHTR*HPGEGP
Trigger: TGGACCCTCCCCTGGATGGCACCGAGTGTGGGGCAG...CAAAACGAGACATGCTAGAAAAGGCTTTATTCTGAAAGCCGGCGACACCATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp TTCTCTGCCTCTAGGGTAGTAAAAACAAAAACACAGCTCGTAAGACAGGGTGGATGCACCACCCGGGACTaGAGGCCCTTCCCGCAGGTC +
Preference number: 4 (lower is better)
Translates to: FSASRVVKTKTQLVRQGGCTTRD*RPFPQV
Trigger: GACCTGCGGGAAGGGCCTGCAGTCCCGGGTGGTGCA...TCCACCCTGTCTTACGAGCTGTGTTTTTGTTTTTACTACCCTAGAGGCAGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp AGTGACACGTGTGCAAGCACAAAGGTACAGTACTCGAGGGACAGTACAGGGTATGCGGGTGGTATGAACTaGGTGGCACTGCTGTCCTCG +
Preference number: 4 (lower is better)
Translates to: SDTCASTKVQYSRDSTGYAGGMN*VALLSS
Trigger: CGAGGACAGCAGTGCCACGCAGTTCATACCACCCGC...ATACCCTGTACTGTCCCTCGAGTACTGTACCTTTGTGCTTGCACACGTGTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp CTGTCTCTGATCCCTCTGCACAGTAGCCCTTTGTCACTAGCGGTGTCACCTACCTTCTCGTCCACTGAATaGGCCCTGGGAGTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: LSLIPLHSSPLSLAVSPTFSSTE*ALGVVE
Trigger: CTCAACAACTCCCAGGGCCCATTCAGTGGACGAGAA...GGTAGGTGACACCGCTAGTGACAAAGGGCTACTGTGCAGAGGGATCAGAGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561355.2
CDS-3UTR CCA 90 bp GCCTCTAGGGTAGTAAAAACAAAAACACAGCTCGTAAGACAGGGTGGAGAAGGCTTGCACCTTCGGACCTaGGGCTCTGGGCGGCTTGCT +
Preference number: 4 (lower is better)
Translates to: ASRVVKTKTQLVRQGGEGLHLRT*GSGRLA
Trigger: AGCAAGCCGCCCAGAGCCCCAGGTCCGAAGGTGCAA...GCCTTCTCCACCCTGTCTTACGAGCTGTGTTTTTGTTTTTACTACCCTAGAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp TCCTCAGAGGTCCCAAATGTCGTCTTACCTTCAGATAAATGGCCACGGTCGGTAGTGCCGTTCTGCAGCTaGTACACGCAGGTCACCTCC +
Preference number: 4 (lower is better)
Translates to: SSEVPNVVLPSDKWPRSVVPFCS*YTQVTS
Trigger: GGAGGTGACCTGCGTGTACCAGCTGCAGAACGGCAC...TACCGACCGTGGCCATTTATCTGAAGGTAAGACGACATTTGGGACCTCTGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp CAGACTCTCTTGGAACATTCTTCCCATGCGGGTGGTATGAACTGCGTGGCACTGATGGACAGGCAGTCCTaGCCTTCACAGCTCTGCACT +
Preference number: 4 (lower is better)
Translates to: QTLLEHSSHAGGMNCVALMDRQS*PSQLCT
Trigger: AGTGCAGAGCTGTGAAGGCCAGGACTGCCTGTCCAT...CAGTGCCACGCAGTTCATACCACCCGCATGGGAAGAATGTTCCAAGAGAGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp GCCTCTAGGGTAGTAAAAACAAAAACACAGCTCGTAAGACAGGGTGGAGAAGGCGGTGAGGCAGAAGAATaGCCTGAACCCGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: ASRVVKTKTQLVRQGGEGGEAEE*PEPGRR
Trigger: CCGCCTCCCGGGTTCAGGCCATTCTTCTGCCTCACC...GCCTTCTCCACCCTGTCTTACGAGCTGTGTTTTTGTTTTTACTACCCTAGAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp CTGACACCCTCGGTTCTTTCCACAGAGCACCCACGGAAGTTTCTCAACACTTCTAAAAGTAGGTGGGCGTaGTGGTGGGCGCCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: LTPSVLSTEHPRKFLNTSKSRWA*WWAPVV
Trigger: GACTACAGGCGCCCACCACCACGCCCACCTACTTTT...AGAAGTGTTGAGAAACTTCCGTGGGTGCTCTGTGGAAAGAACCGAGGGTGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR TCA 90 bp TTGATGCACACCAATGTCCAAAGCTGGGCTGAAGAGCCCCATACCCGGTATGCTAGGACCATTTGCGCCTaGTCAGATGTTCTCGTCCAC +
Preference number: 4 (lower is better)
Translates to: LMHTNVQSWAEEPHTRYARTICA*SDVLVH
Trigger: GTGGACGAGAACATCTGATCAGGCGCAAATGGTCCT...AGCATACCGGGTATGGGGCTCTTCAGCCCAGCTTTGGACATTGGTGTGCATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561355.2
CDS-3UTR TCA 90 bp TCCTCAGAGGTCCCAAATGTCGTCTTACCTTCAGATAAATGGCCACGGTCGGTAGTCGCATTTCCCTTGTaGGTTGGTGCACGCCACGGT +
Preference number: 4 (lower is better)
Translates to: SSEVPNVVLPSDKWPRSVVAFPL*VGARHG
Trigger: ACCGTGGCGTGCACCAACTCACAAGGGAAATGCGAC...TACCGACCGTGGCCATTTATCTGAAGGTAAGACGACATTTGGGACCTCTGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR TCA 90 bp ACACCAAAGCCTTCTCTAGGCCCAATGCCCACAGTTGATGCACACCAATGTCCATCCAGGCCAGACACATaGATGAGGCACCTCCAGATC +
Preference number: 4 (lower is better)
Translates to: TPKPSLGPMPTVDAHQCPSRPDT*MRHLQI
Trigger: GATCTGGAGGTGCCTCATTCATGTGTCTGGCCTGGA...TGGACATTGGTGTGCATCAACTGTGGGCATTGGGCCTAGAGAAGGCTTTGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561355.2
CDS-3UTR GCA 90 bp ATGACAGGCGTGATGATAATGGGTACCACAAAGTCTGGGGCTACAGGAAGGCTCAGAACCTTGCAGAGCTaGTCAGGTCTCTGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: MTGVMIMGTTKSGATGRLRTLQS*SGLWAS
Trigger: TGAGGCCCAGAGACCTGAGCAGCTCTGCAAGGTTCT...GAGCCTTCCTGTAGCCCCAGACTTTGTGGTACCCATTATCATCACGCCTGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp CTGACCAAGGACACTCAGAGTGACTACACCACAGCTCTGACACCAAAGCCTTCTAGAACCTTGCAGAGCTaGTCAGGTCTCTGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: LTKDTQSDYTTALTPKPSRTLQS*SGLWAS
Trigger: TGAGGCCCAGAGACCTGAGCAGCTCTGCAAGGTTCT...AGAAGGCTTTGGTGTCAGAGCTGTGGTGTAGTCACTCTGAGTGTCCTTGGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561355.2
CDS-3UTR GCA 90 bp CAGACTTTAGGGGAACTAATGGGGGTATCTGACAATAACCCAATCAATCCTTTTCCGGGATGGGCGTCTTaGTCACGCACTCCCCCGCGC +
Preference number: 4 (lower is better)
Translates to: QTLGELMGVSDNNPINPFPGWAS*SRTPPR
Trigger: GCGCGGGGGAGTGCGTGAGCAAGACGCCCATCCCGG...AAAAGGATTGATTGGGTTATTGTCAGATACCCCCATTAGTTCCCCTAAAGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp TTCTCTGCCTCTAGGGTAGTAAAAACAAAAACACAGCTCGTAAGACAGGGTGGATCGTGTGCCTGGCACTaGTGGTCCCGGAAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: FSASRVVKTKTQLVRQGGSCAWH*WSRKLG
Trigger: GCCCAGCTTCCGGGACCAGCAGTGCCAGGCACACGA...TCCACCCTGTCTTACGAGCTGTGTTTTTGTTTTTACTACCCTAGAGGCAGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp CTTTGCCTTAGGAAGCAACCCCATCACCGCAATTACCGTTTCTTATGTCACAGCACCTTGTGCATGCACTaGACCACCCGGGACTGCAGG +
Preference number: 4 (lower is better)
Translates to: LCLRKQPHHRNYRFLCHSTLCMH*TTRDCR
Trigger: CCTGCAGTCCCGGGTGGTGCAGTGCATGCACAAGGT...GCTGTGACATAAGAAACGGTAATTGCGGTGATGGGGTTGCTTCCTAAGGCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp AAGCAACCCCATCACCGCAATTACCGTTTCTTATGTCACAGCACCTTGAAGAGACGCCCTGTGACCTTGTaGATGCACTGCACCACCCGG +
Preference number: 4 (lower is better)
Translates to: KQPHHRNYRFLCHSTLKRRPVTL*MHCTTR
Trigger: CCGGGTGGTGCAGTGCATGCACAAGGTCACAGGGCG...TCTCTTCAAGGTGCTGTGACATAAGAAACGGTAATTGCGGTGATGGGGTTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp AGAGCTCTGCAGATGCAGACTTTAGGGGAACTAATGGGGGTATCTGACAATAACGCGGGTGTGCAGCAGTaGCAGCCAGATGGCGTTCCT +
Preference number: 4 (lower is better)
Translates to: RALQMQTLGELMGVSDNNAGVQQ*QPDGVP
Trigger: AGGAACGCCATCTGGCTGGCACTGCTGCACACCCGC...GTTATTGTCAGATACCCCCATTAGTTCCCCTAAAGTCTGCATCTGCAGAGCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp GCATCTCTAAGGTACAAAGCTTTAGGAAGTGCAGGCCAGAGTGGATGTTCCCGGGAATTCATGGGAGTCTaGTGGTGGCCAGGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: ASLRYKALGSAGQSGCSREFMGV*WWPGLK
Trigger: CTTCAGGCCTGGCCACCAGCAGACTCCCATGAATTC...CCGGGAACATCCACTCTGGCCTGCACTTCCTAAAGCTTTGTACCTTAGAGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp GCCTCTAGGGTAGTAAAAACAAAAACACAGCTCGTAAGACAGGGTGGAGAAGGCGTGTACACGAGACGATaGTTCTGCGCTCCCCTCCGC +
Preference number: 4 (lower is better)
Translates to: ASRVVKTKTQLVRQGGEGVYTRR*FCAPLR
Trigger: GCGGAGGGGAGCGCAGAACCATCGTCTCGTGTACAC...GCCTTCTCCACCCTGTCTTACGAGCTGTGTTTTTGTTTTTACTACCCTAGAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp CTGACACCCTCGGTTCTTTCCACAGAGCACCCACGGAAGTTTCTCAACACTTCTCCCCTTTACCACAGCTaGCAGAGCACTGTGACCACT +
Preference number: 4 (lower is better)
Translates to: LTPSVLSTEHPRKFLNTSPLYHS*QSTVTT
Trigger: AGTGGTCACAGTGCTCTGCCAGCTGTGGTAAAGGGG...AGAAGTGTTGAGAAACTTCCGTGGGTGCTCTGTGGAAAGAACCGAGGGTGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp CTTTGCCTTAGGAAGCAACCCCATCACCGCAATTACCGTTTCTTATGTCACAGCATGGCGTTCCTCCCCTaGTCCTGGCACATCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LCLRKQPHHRNYRFLCHSMAFLP*SWHIRL
Trigger: CAGCCTGATGTGCCAGGACCAGGGGAGGAACGCCAT...GCTGTGACATAAGAAACGGTAATTGCGGTGATGGGGTTGCTTCCTAAGGCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp CTGACACCCTCGGTTCTTTCCACAGAGCACCCACGGAAGTTTCTCAACACTTCTGCTCGTAAGACAGGGTaGAGAAGGCAGAGAGGCTTC +
Preference number: 4 (lower is better)
Translates to: LTPSVLSTEHPRKFLNTSARKTG*RRQRGF
Trigger: GAAGCCTCTCTGCCTTCTCCACCCTGTCTTACGAGC...AGAAGTGTTGAGAAACTTCCGTGGGTGCTCTGTGGAAAGAACCGAGGGTGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR CAA 72 bp CATGCAGGAGACCAAGCTAAGGCTTCCTTAGTGAGCTaGCCCGGCTCTGCTCCTTGGCTGCAAAAGTCTAAA +
Preference number: 4 (lower is better)
Translates to: HAGDQAKASLVS*PGSAPWLQKSK
Trigger: TTTAGACTTTTGCAGCCAAGGAGCAGAGCCGGGCAAGCTCACTAAGGAAGCCTTAGCTTGGTCTCCTGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR TCA 90 bp TCCTCAGAGGTCCCAAATGTCGTCTTACCTTCAGATAAATGGCCACGGTCGGTAGATGTTCTCGTCCACTaGATGGGCCCTGGGAGTTGT +
Preference number: 4 (lower is better)
Translates to: SSEVPNVVLPSDKWPRSVDVLVH*MGPGSC
Trigger: ACAACTCCCAGGGCCCATTCAGTGGACGAGAACATC...TACCGACCGTGGCCATTTATCTGAAGGTAAGACGACATTTGGGACCTCTGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR TCA 90 bp AGAGCTCTGCAGATGCAGACTTTAGGGGAACTAATGGGGGTATCTGACAATAACCCTGAGTCTGAGCTTTaGGCGACCCTTGGGACTGCG +
Preference number: 4 (lower is better)
Translates to: RALQMQTLGELMGVSDNNPESEL*ATLGTA
Trigger: CGCAGTCCCAAGGGTCGCTCAAAGCTCAGACTCAGG...GTTATTGTCAGATACCCCCATTAGTTCCCCTAAAGTCTGCATCTGCAGAGCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR TCA 90 bp AATGTCCAAAGCTGGGCTGAAGAGCCCCATACCCGGTATGCTGTCTCTGAACTACAAGGACACTCAGAGTaGCTACACCACAGCTCTGAC +
Preference number: 4 (lower is better)
Translates to: NVQSWAEEPHTRYAVSELQGHSE*LHHSSD
Trigger: GTCAGAGCTGTGGTGTAGTCACTCTGAGTGTCCTTG...TAGTTCAGAGACAGCATACCGGGTATGGGGCTCTTCAGCCCAGCTTTGGACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561355.2
CDS-3UTR GCA 90 bp AGTGACACGTGTGCAAGCACAAAGGTACAGTACTCGAGGGACAGTACAGGGTATGCGAACAGTTGTGCCTaGAATCTGGAACTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: SDTCASTKVQYSRDSTGYANSCA*NLELSG
Trigger: CCCGGAGAGTTCCAGATTGCAGGCACAACTGTTCGC...ATACCCTGTACTGTCCCTCGAGTACTGTACCTTTGTGCTTGCACACGTGTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp AAGCAACCCCATCACCGCAATTACCGTTTCTTATGTCACAGCACCTTGAAGAGACGTGACTGGCAGGGGTaGAAGTTGCACCTTCGGACC +
Preference number: 4 (lower is better)
Translates to: KQPHHRNYRFLCHSTLKRRDWQG*KLHLRT
Trigger: GGTCCGAAGGTGCAACTTGCACCCCTGCCAGTCACG...TCTCTTCAAGGTGCTGTGACATAAGAAACGGTAATTGCGGTGATGGGGTTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp ATCCTAGGCCTGGGCTTGTGTCCTCAGAGGTCCCAAATGTCGTCTTACCTTCAGTCCACTGGTCTCGTGTaGATTTGTAGGTCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: ILGLGLCPQRSQMSSYLQSTGLV*ICRSEQ
Trigger: CTGCTCTGACCTACAAATGCACACGAGACCAGTGGA...CTGAAGGTAAGACGACATTTGGGACCTCTGAGGACACAAGCCCAGGCCTAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp AGGACCTTCCTTCATCATGCATCATCCTTGCCCCACCAAGAAGATGGGTCAATGCTCTTGACGGTTGTCTaGCAGAGGTGCTTCCCTTCG +
Preference number: 4 (lower is better)
Translates to: RTFLHHASSLPHQEDGSMLLTVV*QRCFPS
Trigger: CGAAGGGAAGCACCTCTGGCAGACAACCGTCAAGAG...CATTGACCCATCTTCTTGGTGGGGCAAGGATGATGCATGATGAAGGAAGGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp TCCATGGTGTCGCCGGCTTTCAGAATAAAGCCTTTTCTAGCATGTCTCGTTTTGAGGCTCACCAACACCTaGCCCTCCCTCCATGGTGTC +
Preference number: 4 (lower is better)
Translates to: SMVSPAFRIKPFLACLVLRLTNT*PSLHGV
Trigger: GACACCATGGAGGGAGGGGCAGGTGTTGGTGAGCCT...CAAAACGAGACATGCTAGAAAAGGCTTTATTCTGAAAGCCGGCGACACCATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp CTTAGGAAGCAACCCCATCACCGCAATTACCGTTTCTTATGTCACAGCACCTTGCATCAGGCTGCTCCGTaGCAGGATAGAGCAGTCAGG +
Preference number: 4 (lower is better)
Translates to: LRKQPHHRNYRFLCHSTLHQAAP*QDRAVR
Trigger: CCTGACTGCTCTATCCTGGCACGGAGCAGCCTGATG...CAAGGTGCTGTGACATAAGAAACGGTAATTGCGGTGATGGGGTTGCTTCCTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp TCCTCAGAGGTCCCAAATGTCGTCTTACCTTCAGATAAATGGCCACGGTCGGTATCAAAGAGGCCACTCTaGTTGTCTGCTGCCAGGCGT +
Preference number: 4 (lower is better)
Translates to: SSEVPNVVLPSDKWPRSVSKRPL*LSAARR
Trigger: ACGCCTGGCAGCAGACAAGCAGAGTGGCCTCTTTGA...TACCGACCGTGGCCATTTATCTGAAGGTAAGACGACATTTGGGACCTCTGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp CTTTGCCTTAGGAAGCAACCCCATCACCGCAATTACCGTTTCTTATGTCACAGCGAGCTTGCCCGGCTCTaGTCCTTGGCTGCAAAAGTC +
Preference number: 4 (lower is better)
Translates to: LCLRKQPHHRNYRFLCHSELARL*SLAAKV
Trigger: GACTTTTGCAGCCAAGGAGCAGAGCCGGGCAAGCTC...GCTGTGACATAAGAAACGGTAATTGCGGTGATGGGGTTGCTTCCTAAGGCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp GCATCTCTAAGGTACAAAGCTTTAGGAAGTGCAGGCCAGAGTGGATGTTCCCGGTTCTCGTCCACTGAATaGGCCCTGGGAGTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: ASLRYKALGSAGQSGCSRFSSTE*ALGVVE
Trigger: CTCAACAACTCCCAGGGCCCATTCAGTGGACGAGAA...CCGGGAACATCCACTCTGGCCTGCACTTCCTAAAGCTTTGTACCTTAGAGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp CTGACACCCTCGGTTCTTTCCACAGAGCACCCACGGAAGTTTCTCAACACTTCTTCTCCTGACATGATGTaGGACCTGCCAGCGCAAGAT +
Preference number: 4 (lower is better)
Translates to: LTPSVLSTEHPRKFLNTSSPDMM*DLPAQD
Trigger: ATCTTGCGCTGGCAGGTCCCACATCATGTCAGGAGA...AGAAGTGTTGAGAAACTTCCGTGGGTGCTCTGTGGAAAGAACCGAGGGTGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp CTTAGGAAGCAACCCCATCACCGCAATTACCGTTTCTTATGTCACAGCACCTTGAGGCGTACTGTGTGCTaGCTTCTGGGGTCCGTGACT +
Preference number: 4 (lower is better)
Translates to: LRKQPHHRNYRFLCHSTLRRTVC*LLGSVT
Trigger: AGTCACGGACCCCAGAAGCCAGCACACAGTACGCCT...CAAGGTGCTGTGACATAAGAAACGGTAATTGCGGTGATGGGGTTGCTTCCTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp TCCTCAGAGGTCCCAAATGTCGTCTTACCTTCAGATAAATGGCCACGGTCGGTAGTTGTGCCTGCAATCTaGAACTCTCCGGGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: SSEVPNVVLPSDKWPRSVVVPAI*NSPGSS
Trigger: AGAGCTCCCCGGAGAGTTCCAGATTGCAGGCACAAC...TACCGACCGTGGCCATTTATCTGAAGGTAAGACGACATTTGGGACCTCTGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp AAGCAACCCCATCACCGCAATTACCGTTTCTTATGTCACAGCACCTTGAAGAGACGGCTCTCGGCCTCGTaGATGCGTCGCATTTCCCTT +
Preference number: 4 (lower is better)
Translates to: KQPHHRNYRFLCHSTLKRRLSAS*MRRISL
Trigger: AAGGGAAATGCGACGCATCCACGAGGCCGAGAGCCG...TCTCTTCAAGGTGCTGTGACATAAGAAACGGTAATTGCGGTGATGGGGTTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp AGAGCTCTGCAGATGCAGACTTTAGGGGAACTAATGGGGGTATCTGACAATAACCTGCCCCTCCCTCCATaGTGTCGCCGGCTTTCAGAA +
Preference number: 4 (lower is better)
Translates to: RALQMQTLGELMGVSDNNLPLPP*CRRLSE
Trigger: TTCTGAAAGCCGGCGACACCATGGAGGGAGGGGCAG...GTTATTGTCAGATACCCCCATTAGTTCCCCTAAAGTCTGCATCTGCAGAGCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp ATGACAGGCGTGATGATAATGGGTACCACAAAGTCTGGGGCTACAGGAAGGCTCTTCTTCCCATGCGGGTaGTATGAACTGCGTGGCACT +
Preference number: 4 (lower is better)
Translates to: MTGVMIMGTTKSGATGRLFFPCG*YELRGT
Trigger: AGTGCCACGCAGTTCATACCACCCGCATGGGAAGAA...GAGCCTTCCTGTAGCCCCAGACTTTGTGGTACCCATTATCATCACGCCTGTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR TCA 90 bp AAGGCCTGCCCCACGTCGGCTTCTTCTTTTCTGTTAGAACCTTGCAGAGCTGCTCCCAGGCTCTGGTGCTaGAACATATTGTATACCATG +
Preference number: 4 (lower is better)
Translates to: KACPTSASSFLLEPCRAAPRLWC*NILYTM
Trigger: CATGGTATACAATATGTTTCAGCACCAGAGCCTGGG...AGCAGCTCTGCAAGGTTCTAACAGAAAAGAAGAAGCCGACGTGGGGCAGGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558960.1
CDS-3UTR TCA 90 bp TCCTCAGAGGTCCCAAATGTCGTCTTACCTTCAGATAAATGGCCACGGTCGGTATCTTCCAGTCACTGTTaGTGGACCCCTTACCCGAGT +
Preference number: 4 (lower is better)
Translates to: SSEVPNVVLPSDKWPRSVSSSHC*WTPYPS
Trigger: ACTCGGGTAAGGGGTCCATCAACAGTGACTGGAAGA...TACCGACCGTGGCCATTTATCTGAAGGTAAGACGACATTTGGGACCTCTGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR TCA 90 bp AGGACCTTCCTTCATCATGCATCATCCTTGCCCCACCAAGAAGATGGGTCAATGGGTTCTTTTCTCGGATaGCCCGGCAATATACCGTCC +
Preference number: 4 (lower is better)
Translates to: RTFLHHASSLPHQEDGSMGSFLG*PGNIPS
Trigger: GGACGGTATATTGCCGGGTCATCCGAGAAAAGAACC...CATTGACCCATCTTCTTGGTGGGGCAAGGATGATGCATGATGAAGGAAGGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR TCA 90 bp ATCCTAGGCCTGGGCTTGTGTCCTCAGAGGTCCCAAATGTCGTCTTACCTTCAGTATGTCACAGCACCTTaGAGAGAGGCCCTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: ILGLGLCPQRSQMSSYLQYVTAP*REALLF
Trigger: AAACAGAAGGGCCTCTCTTCAAGGTGCTGTGACATA...CTGAAGGTAAGACGACATTTGGGACCTCTGAGGACACAAGCCCAGGCCTAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR TCA 90 bp CTGACACCCTCGGTTCTTTCCACAGAGCACCCACGGAAGTTTCTCAACACTTCTCCATGGAAGTCCAAGTaGGACCTTCCGTCTGAAATC +
Preference number: 4 (lower is better)
Translates to: LTPSVLSTEHPRKFLNTSPWKSK*DLPSEI
Trigger: GATTTCAGACGGAAGGTCTCACTTGGACTTCCATGG...AGAAGTGTTGAGAAACTTCCGTGGGTGCTCTGTGGAAAGAACCGAGGGTGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR TCA 90 bp AGAGCTCTGCAGATGCAGACTTTAGGGGAACTAATGGGGGTATCTGACAATAACAGCACCGTAGGGTCGTaGGACTCTGGTAACACGTGC +
Preference number: 4 (lower is better)
Translates to: RALQMQTLGELMGVSDNNSTVGS*DSGNTC
Trigger: GCACGTGTTACCAGAGTCTCACGACCCTACGGTGCT...GTTATTGTCAGATACCCCCATTAGTTCCCCTAAAGTCTGCATCTGCAGAGCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp ATCCTAGGCCTGGGCTTGTGTCCTCAGAGGTCCCAAATGTCGTCTTACCTTCAGAGAAGGTGGCATTCATaGCAAACAGGATCTGGCACT +
Preference number: 4 (lower is better)
Translates to: ILGLGLCPQRSQMSSYLQRRWHS*QTGSGT
Trigger: AGTGCCAGATCCTGTTTGGCATGAATGCCACCTTCT...CTGAAGGTAAGACGACATTTGGGACCTCTGAGGACACAAGCCCAGGCCTAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp AGTGACACGTGTGCAAGCACAAAGGTACAGTACTCGAGGGACAGTACAGGGTATCGATTTTCTGGCACTTaGCGTGCACGCAGAGATCAG +
Preference number: 4 (lower is better)
Translates to: SDTCASTKVQYSRDSTGYRFSGT*RARRDQ
Trigger: CTGATCTCTGCGTGCACGGCAAGTGCCAGAAAATCG...ATACCCTGTACTGTCCCTCGAGTACTGTACCTTTGTGCTTGCACACGTGTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp CTTAGGAAGCAACCCCATCACCGCAATTACCGTTTCTTATGTCACAGCACCTTGTCTGTCCTCTTTGGCTaGAGACCCGATGATGCCGTC +
Preference number: 4 (lower is better)
Translates to: LRKQPHHRNYRFLCHSTLSVLFG*RPDDAV
Trigger: GACGGCATCATCGGGTCTGCAGCCAAAGAGGACAGA...CAAGGTGCTGTGACATAAGAAACGGTAATTGCGGTGATGGGGTTGCTTCCTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp TCCATGGTGTCGCCGGCTTTCAGAATAAAGCCTTTTCTAGCATGTCTCGTTTTGACGTGTGTGCCGTTCTaGAGCTGGTACACGCAGGTC +
Preference number: 4 (lower is better)
Translates to: SMVSPAFRIKPFLACLVLTCVPF*SWYTQV
Trigger: GACCTGCGTGTACCAGCTGCAGAACGGCACACACGT...CAAAACGAGACATGCTAGAAAAGGCTTTATTCTGAAAGCCGGCGACACCATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp AAGCAACCCCATCACCGCAATTACCGTTTCTTATGTCACAGCACCTTGAAGAGATCCCTTGTGAGTTGGTaGACGCCACGGTCCGTTTCC +
Preference number: 4 (lower is better)
Translates to: KQPHHRNYRFLCHSTLKRSLVSW*TPRSVS
Trigger: GGAAACGGACCGTGGCGTGCACCAACTCACAAGGGA...TCTCTTCAAGGTGCTGTGACATAAGAAACGGTAATTGCGGTGATGGGGTTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp TCCTCAGAGGTCCCAAATGTCGTCTTACCTTCAGATAAATGGCCACGGTCGGTAAGAGCAGTCAGGCCTTaGTCTACAGATCCTAGGCCT +
Preference number: 4 (lower is better)
Translates to: SSEVPNVVLPSDKWPRSVRAVRP*STDPRP
Trigger: AGGCCTAGGATCTGTAGAGCAAGGCCTGACTGCTCT...TACCGACCGTGGCCATTTATCTGAAGGTAAGACGACATTTGGGACCTCTGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp CTGACACCCTCGGTTCTTTCCACAGAGCACCCACGGAAGTTTCTCAACACTTCTGACTCTGGTAACACGTaGGTTAGTGACACGTGTGCA +
Preference number: 4 (lower is better)
Translates to: LTPSVLSTEHPRKFLNTSDSGNT*VSDTCA
Trigger: TGCACACGTGTCACTAACGCACGTGTTACCAGAGTC...AGAAGTGTTGAGAAACTTCCGTGGGTGCTCTGTGGAAAGAACCGAGGGTGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp TTGATGCACACCAATGTCCAAAGCTGGGCTGAAGAGCCCCATACCCGGTATGCTGAACTGTTAGAACCTTaGAGAGCTGCTCAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: LMHTNVQSWAEEPHTRYAELLEP*RAAQVS
Trigger: AGAGACCTGAGCAGCTCTGCAAGGTTCTAACAGTTC...AGCATACCGGGTATGGGGCTCTTCAGCCCAGCTTTGGACATTGGTGTGCATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561355.2
CDS-3UTR CCA 90 bp TCCATGGTGTCGCCGGCTTTCAGAATAAAGCCTTTTCTAGCATGTCTCGTTTTGCCTCAGCAGAAGGGCTaGGGGTCAAGGACCATTTGC +
Preference number: 4 (lower is better)
Translates to: SMVSPAFRIKPFLACLVLPQQKG*GSRTIC
Trigger: GCAAATGGTCCTTGACCCCCAGCCCTTCTGCTGAGG...CAAAACGAGACATGCTAGAAAAGGCTTTATTCTGAAAGCCGGCGACACCATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp AGGACCTTCCTTCATCATGCATCATCCTTGCCCCACCAAGAAGATGGGTCAATGAGGGACCGCTCACCATaGTGCCCAATGGACAACTTA +
Preference number: 4 (lower is better)
Translates to: RTFLHHASSLPHQEDGSMRDRSP*CPMDNL
Trigger: TAAGTTGTCCATTGGGCACCATGGTGAGCGGTCCCT...CATTGACCCATCTTCTTGGTGGGGCAAGGATGATGCATGATGAAGGAAGGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp AGGACCTTCCTTCATCATGCATCATCCTTGCCCCACCAAGAAGATGGGTCAATGCCAGCGCAAGATGAGTaGTCATCGTCGTGGTTCATG +
Preference number: 4 (lower is better)
Translates to: RTFLHHASSLPHQEDGSMPAQDE*SSSWFM
Trigger: CATGAACCACGACGATGACCACTCATCTTGCGCTGG...CATTGACCCATCTTCTTGGTGGGGCAAGGATGATGCATGATGAAGGAAGGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp CTTAGGAAGCAACCCCATCACCGCAATTACCGTTTCTTATGTCACAGCACCTTGTCACAGCCGATTTTCTaGCACTTGCCGTGCACGCAG +
Preference number: 4 (lower is better)
Translates to: LRKQPHHRNYRFLCHSTLSQPIF*HLPCTQ
Trigger: CTGCGTGCACGGCAAGTGCCAGAAAATCGGCTGTGA...CAAGGTGCTGTGACATAAGAAACGGTAATTGCGGTGATGGGGTTGCTTCCTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp ATGACAGGCGTGATGATAATGGGTACCACAAAGTCTGGGGCTACAGGAAGGCTCTCGGTAGAAAGCCACTaGGATGTGGTACAGCATCTC +
Preference number: 4 (lower is better)
Translates to: MTGVMIMGTTKSGATGRLSVESH*DVVQHL
Trigger: GAGATGCTGTACCACATCCCAGTGGCTTTCTACCGA...GAGCCTTCCTGTAGCCCCAGACTTTGTGGTACCCATTATCATCACGCCTGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp AAGCAACCCCATCACCGCAATTACCGTTTCTTATGTCACAGCACCTTGAAGAGAGGGTACCACAAAGTCTaGGGCTACAGGAAGGCTCGG +
Preference number: 4 (lower is better)
Translates to: KQPHHRNYRFLCHSTLKRGYHKV*GYRKAR
Trigger: CCGAGCCTTCCTGTAGCCCCAGACTTTGTGGTACCC...TCTCTTCAAGGTGCTGTGACATAAGAAACGGTAATTGCGGTGATGGGGTTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR CAA 72 bp CTCGAGCTGTCTCTGATCCCTCTGCACAGTAGCCCTTaGTCACTAGCGGTGTCACCTACCTACAGTTATAGA +
Preference number: 4 (lower is better)
Translates to: LELSLIPLHSSP*SLAVSPTYSYR
Trigger: TCTATAACTGTAGGTAGGTGACACCGCTAGTGACAAAGGGCTACTGTGCAGAGGGATCAGAGACAGCTCGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561355.2
CDS-3UTR TCA 90 bp TTCTCTGCCTCTAGGGTAGTAAAAACAAAAACACAGCTCGTAAGACAGGGTGGACCTGCCAGCGCAAGATaGGTGGTCATCGTCGTGGTT +
Preference number: 4 (lower is better)
Translates to: FSASRVVKTKTQLVRQGGPASAR*VVIVVV
Trigger: AACCACGACGATGACCACTCATCTTGCGCTGGCAGG...TCCACCCTGTCTTACGAGCTGTGTTTTTGTTTTTACTACCCTAGAGGCAGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR TCA 90 bp CAGACTTTAGGGGAACTAATGGGGGTATCTGACAATAACCCAATCAATCCTTTTCCCACTCTCCTGACATaGTGTGGGACCTGCCAGCGC +
Preference number: 4 (lower is better)
Translates to: QTLGELMGVSDNNPINPFPTLLT*CGTCQR
Trigger: GCGCTGGCAGGTCCCACATCATGTCAGGAGAGTGGG...AAAAGGATTGATTGGGTTATTGTCAGATACCCCCATTAGTTCCCCTAAAGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR TCA 90 bp AGAGCTCTGCAGATGCAGACTTTAGGGGAACTAATGGGGGTATCTGACAATAACTTTCACCCACTCTCCTaGCATGATGTGGGACCTGCC +
Preference number: 4 (lower is better)
Translates to: RALQMQTLGELMGVSDNNFHPLS*HDVGPA
Trigger: GGCAGGTCCCACATCATGTCAGGAGAGTGGGTGAAA...GTTATTGTCAGATACCCCCATTAGTTCCCCTAAAGTCTGCATCTGCAGAGCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR TCA 90 bp AGAGCTCTGCAGATGCAGACTTTAGGGGAACTAATGGGGGTATCTGACAATAACCGCTGTGGGTCCAGATaGACAAAGAGTCCTGCGGTT +
Preference number: 4 (lower is better)
Translates to: RALQMQTLGELMGVSDNNRCGSR*TKSPAV
Trigger: AACCGCAGGACTCTTTGTTCATCTGGACCCACAGCG...GTTATTGTCAGATACCCCCATTAGTTCCCCTAAAGTCTGCATCTGCAGAGCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR TCA 90 bp CAGACTTTAGGGGAACTAATGGGGGTATCTGACAATAACCCAATCAATCCTTTTGCTGGCAGAGCACTGTaGCCACTCAGACGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: QTLGELMGVSDNNPINPFAGRAL*PLRRLP
Trigger: TGGGAGGCGTCTGAGTGGTCACAGTGCTCTGCCAGC...AAAAGGATTGATTGGGTTATTGTCAGATACCCCCATTAGTTCCCCTAAAGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR TCA 90 bp ACACCAAAGCCTTCTCTAGGCCCAATGCCCACAGTTGATGCACACCAATGTCCACCGGTATGCTGTCTCTaGACTATGGAATATGCTCTC +
Preference number: 4 (lower is better)
Translates to: TPKPSLGPMPTVDAHQCPPVCCL*TMEYAL
Trigger: GAGAGCATATTCCATAGTTCAGAGACAGCATACCGG...TGGACATTGGTGTGCATCAACTGTGGGCATTGGGCCTAGAGAAGGCTTTGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561355.2
CDS-3UTR GCA 90 bp GTGCTGAAACATATTGTATACCATGTTCATGACGGTCAGGATGAACCTCTGGGCAGAACCTTGCAGAGCTaGTCAGGTCTCTGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: VLKHIVYHVHDGQDEPLGRTLQS*SGLWAS
Trigger: TGAGGCCCAGAGACCTGAGCAGCTCTGCAAGGTTCT...GCCCAGAGGTTCATCCTGACCGTCATGAACATGGTATACAATATGTTTCAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558960.1
CDS-3UTR GCA 90 bp AAGCAACCCCATCACCGCAATTACCGTTTCTTATGTCACAGCACCTTGAAGAGATTGTCACATTTCCTCTaGCTGAAGCGGGCTCCCGTC +
Preference number: 4 (lower is better)
Translates to: KQPHHRNYRFLCHSTLKRLSHFL*LKRAPV
Trigger: GACGGGAGCCCGCTTCAGGCAGAGGAAATGTGACAA...TCTCTTCAAGGTGCTGTGACATAAGAAACGGTAATTGCGGTGATGGGGTTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp AAGCAACCCCATCACCGCAATTACCGTTTCTTATGTCACAGCACCTTGAAGAGATTCTGGCACTTGCCGTaGACGCAGAGATCAGTCTCG +
Preference number: 4 (lower is better)
Translates to: KQPHHRNYRFLCHSTLKRFWHLP*TQRSVS
Trigger: CGAGACTGATCTCTGCGTGCACGGCAAGTGCCAGAA...TCTCTTCAAGGTGCTGTGACATAAGAAACGGTAATTGCGGTGATGGGGTTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp CAGACTTTAGGGGAACTAATGGGGGTATCTGACAATAACCCAATCAATCCTTTTGGGCTCTGGGCGGCTTaGTTGAGGGCAGTCACTGTC +
Preference number: 4 (lower is better)
Translates to: QTLGELMGVSDNNPINPFGLWAA*LRAVTV
Trigger: GACAGTGACTGCCCTCAAGCAAGCCGCCCAGAGCCC...AAAAGGATTGATTGGGTTATTGTCAGATACCCCCATTAGTTCCCCTAAAGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp CAGACTTTAGGGGAACTAATGGGGGTATCTGACAATAACCCAATCAATCCTTTTGGCAGGGGTGCAAGTTaGACCTTCGGACCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: QTLGELMGVSDNNPINPFGRGAS*TFGPGA
Trigger: AGCCCCAGGTCCGAAGGTGCAACTTGCACCCCTGCC...AAAAGGATTGATTGGGTTATTGTCAGATACCCCCATTAGTTCCCCTAAAGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp TTCTCTGCCTCTAGGGTAGTAAAAACAAAAACACAGCTCGTAAGACAGGGTGGACAGGTCACCTCCCGGTaGTGGAAGCCTTTCTCACAG +
Preference number: 4 (lower is better)
Translates to: FSASRVVKTKTQLVRQGGQVTSR*WKPFSQ
Trigger: CTGTGAGAAAGGCTTCCAGCACCGGGAGGTGACCTG...TCCACCCTGTCTTACGAGCTGTGTTTTTGTTTTTACTACCCTAGAGGCAGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp CAGACTTTAGGGGAACTAATGGGGGTATCTGACAATAACCCAATCAATCCTTTTAGCGACCCTTGGGACTaGGTGTCACGAGTTCGGCGG +
Preference number: 4 (lower is better)
Translates to: QTLGELMGVSDNNPINPFSDPWD*VSRVRR
Trigger: CCGCCGAACTCGTGACACGCAGTCCCAAGGGTCGCT...AAAAGGATTGATTGGGTTATTGTCAGATACCCCCATTAGTTCCCCTAAAGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp AGAGCTCTGCAGATGCAGACTTTAGGGGAACTAATGGGGGTATCTGACAATAACGTTGTCTGCCAGAGGTaGTTCCCTTCGAGGTACCTG +
Preference number: 4 (lower is better)
Translates to: RALQMQTLGELMGVSDNNVVCQR*FPSRYL
Trigger: CAGGTACCTCGAAGGGAAGCACCTCTGGCAGACAAC...GTTATTGTCAGATACCCCCATTAGTTCCCCTAAAGTCTGCATCTGCAGAGCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp TCCTCAGAGGTCCCAAATGTCGTCTTACCTTCAGATAAATGGCCACGGTCGGTAGCCCAAGCTTACCTTTaGCTTAGGAAGCAACCCCAT +
Preference number: 4 (lower is better)
Translates to: SSEVPNVVLPSDKWPRSVAQAYL*LRKQPH
Trigger: ATGGGGTTGCTTCCTAAGGCAAAGGTAAGCTTGGGC...TACCGACCGTGGCCATTTATCTGAAGGTAAGACGACATTTGGGACCTCTGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp TCCATGGTGTCGCCGGCTTTCAGAATAAAGCCTTTTCTAGCATGTCTCGTTTTGTTCATGCCCAAGTTGTaGCCCAGCTCATGGGCGATG +
Preference number: 4 (lower is better)
Translates to: SMVSPAFRIKPFLACLVLFMPKL*PSSWAM
Trigger: CATCGCCCATGAGCTGGGCCACAACTTGGGCATGAA...CAAAACGAGACATGCTAGAAAAGGCTTTATTCTGAAAGCCGGCGACACCATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp TCCATGGTGTCGCCGGCTTTCAGAATAAAGCCTTTTCTAGCATGTCTCGTTTTGCCAAGAGAGGTCACTTaGGTTCCGGCCTTTCACCCA +
Preference number: 4 (lower is better)
Translates to: SMVSPAFRIKPFLACLVLPREVT*VPAFHP
Trigger: TGGGTGAAAGGCCGGAACCCAAGTGACCTCTCTTGG...CAAAACGAGACATGCTAGAAAAGGCTTTATTCTGAAAGCCGGCGACACCATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp GCCTCTAGGGTAGTAAAAACAAAAACACAGCTCGTAAGACAGGGTGGAGAAGGCATGCCAAACAGGATCTaGCACTGCTCGTTGGCACTG +
Preference number: 4 (lower is better)
Translates to: ASRVVKTKTQLVRQGGEGMPNRI*HCSLAL
Trigger: CAGTGCCAACGAGCAGTGCCAGATCCTGTTTGGCAT...GCCTTCTCCACCCTGTCTTACGAGCTGTGTTTTTGTTTTTACTACCCTAGAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp TCCATGGTGTCGCCGGCTTTCAGAATAAAGCCTTTTCTAGCATGTCTCGTTTTGCCTTCCCAGCCGCTGTaGGTCCAGATGAACAAAGAG +
Preference number: 4 (lower is better)
Translates to: SMVSPAFRIKPFLACLVLPSQPL*VQMNKE
Trigger: CTCTTTGTTCATCTGGACCCACAGCGGCTGGGAAGG...CAAAACGAGACATGCTAGAAAAGGCTTTATTCTGAAAGCCGGCGACACCATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp CTGACACCCTCGGTTCTTTCCACAGAGCACCCACGGAAGTTTCTCAACACTTCTCATGTTCTATGTAGTTaGATTCTTGTGGCAGCCGGG +
Preference number: 4 (lower is better)
Translates to: LTPSVLSTEHPRKFLNTSHVLCS*ILVAAG
Trigger: CCCGGCTGCCACAAGAATCCAACTACATAGAACATG...AGAAGTGTTGAGAAACTTCCGTGGGTGCTCTGTGGAAAGAACCGAGGGTGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp CTTTGCCTTAGGAAGCAACCCCATCACCGCAATTACCGTTTCTTATGTCACAGCGCCCCACCAAGAAGATaGGTCAATGATGACAGGCGT +
Preference number: 4 (lower is better)
Translates to: LCLRKQPHHRNYRFLCHSAPPRR*VNDDRR
Trigger: ACGCCTGTCATCATTGACCCATCTTCTTGGTGGGGC...GCTGTGACATAAGAAACGGTAATTGCGGTGATGGGGTTGCTTCCTAAGGCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp AGGACCTTCCTTCATCATGCATCATCCTTGCCCCACCAAGAAGATGGGTCAATGCCCGGCTCTGCTCCTTaGCTGCAAAAGTCTAAATGT +
Preference number: 4 (lower is better)
Translates to: RTFLHHASSLPHQEDGSMPGSAP*LQKSKC
Trigger: ACATTTAGACTTTTGCAGCCAAGGAGCAGAGCCGGG...CATTGACCCATCTTCTTGGTGGGGCAAGGATGATGCATGATGAAGGAAGGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR CAA 72 bp CGAGTCAAGACAAGAACACTAAATGATGTCTCTCTCTaGACGGTTGTCTGCCAGAGGTGCTTCCCTTCGAGG +
Preference number: 4 (lower is better)
Translates to: RVKTRTLNDVSL*TVVCQRCFPSR
Trigger: CCTCGAAGGGAAGCACCTCTGGCAGACAACCGTCAAGAGAGAGACATCATTTAGTGTTCTTGTCTTGACTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
3UTR CAA 72 bp CATCACCGCAATTACCGTTTCTTATGTCACAGCACCTaGAAGAGAGGCCCTTCTGTTTCCCTACACGGTGGA +
Preference number: 4 (lower is better)
Translates to: HHRNYRFLCHST*KRGPSVSLHGG
Trigger: TCCACCGTGTAGGGAAACAGAAGGGCCTCTCTTCAAGGTGCTGTGACATAAGAAACGGTAATTGCGGTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR TCA 90 bp TCCATGGTGTCGCCGGCTTTCAGAATAAAGCCTTTTCTAGCATGTCTCGTTTTGAGGACCATTTGCGCCTaGTCAGATGTTCTCGTCCAC +
Preference number: 4 (lower is better)
Translates to: SMVSPAFRIKPFLACLVLRTICA*SDVLVH
Trigger: GTGGACGAGAACATCTGATCAGGCGCAAATGGTCCT...CAAAACGAGACATGCTAGAAAAGGCTTTATTCTGAAAGCCGGCGACACCATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR TCA 90 bp CTGACACCCTCGGTTCTTTCCACAGAGCACCCACGGAAGTTTCTCAACACTTCTGGGATGTTTCCTCCATaGTATACCAAGCACTGGAAA +
Preference number: 4 (lower is better)
Translates to: LTPSVLSTEHPRKFLNTSGMFPP*YTKHWK
Trigger: TTTCCAGTGCTTGGTATATCATGGAGGAAACATCCC...AGAAGTGTTGAGAAACTTCCGTGGGTGCTCTGTGGAAAGAACCGAGGGTGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR TCA 90 bp GCCTCTAGGGTAGTAAAAACAAAAACACAGCTCGTAAGACAGGGTGGAGAAGGCAGAAGCACAGGGAGATaGTCCCATGGAAGTCCAAGT +
Preference number: 4 (lower is better)
Translates to: ASRVVKTKTQLVRQGGEGRSTGR*SHGSPS
Trigger: ACTTGGACTTCCATGGGATCATCTCCCTGTGCTTCT...GCCTTCTCCACCCTGTCTTACGAGCTGTGTTTTTGTTTTTACTACCCTAGAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR TCA 90 bp CTGACCAAGGACACTCAGAGTGACTACACCACAGCTCTGACACCAAAGCCTTCTAGAGTACCTTCAGAGTaGTGCTCTAGGATTTCTGAG +
Preference number: 4 (lower is better)
Translates to: LTKDTQSDYTTALTPKPSRVPSE*CSRISE
Trigger: CTCAGAAATCCTAGAGCATCACTCTGAAGGTACTCT...AGAAGGCTTTGGTGTCAGAGCTGTGGTGTAGTCACTCTGAGTGTCCTTGGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561355.2
CDS-3UTR GCA 90 bp CAGACTTTAGGGGAACTAATGGGGGTATCTGACAATAACCCAATCAATCCTTTTTGGCACTGTAGTGCATaGCCGGCAGCTTGTGCGGGA +
Preference number: 4 (lower is better)
Translates to: QTLGELMGVSDNNPINPFWHCSA*PAACAG
Trigger: TCCCGCACAAGCTGCCGGGCATGCACTACAGTGCCA...AAAAGGATTGATTGGGTTATTGTCAGATACCCCCATTAGTTCCCCTAAAGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp ATGACAGGCGTGATGATAATGGGTACCACAAAGTCTGGGGCTACAGGAAGGCTCAACAACACCATCAAGTaGAGCGGTAGTTTGGTTGGT +
Preference number: 4 (lower is better)
Translates to: MTGVMIMGTTKSGATGRLNNTIK*SGSLVG
Trigger: ACCAACCAAACTACCGCTGCACTTGATGGTGTTGTT...GAGCCTTCCTGTAGCCCCAGACTTTGTGGTACCCATTATCATCACGCCTGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp CTTTGCCTTAGGAAGCAACCCCATCACCGCAATTACCGTTTCTTATGTCACAGCCTGGCGCATCTTGTTTaGATAGAAGTCCCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: LCLRKQPHHRNYRFLCHSLAHLV*IEVPAG
Trigger: ACCTGCAGGGACTTCTATGCAAACAAGATGCGCCAG...GCTGTGACATAAGAAACGGTAATTGCGGTGATGGGGTTGCTTCCTAAGGCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp ATCCTAGGCCTGGGCTTGTGTCCTCAGAGGTCCCAAATGTCGTCTTACCTTCAGGCTCTGCTCCTTGGCTaGAAAAGTCTAAATGTCTTT +
Preference number: 4 (lower is better)
Translates to: ILGLGLCPQRSQMSSYLQALLLG*KSLNVF
Trigger: AAAGACATTTAGACTTTTGCAGCCAAGGAGCAGAGC...CTGAAGGTAAGACGACATTTGGGACCTCTGAGGACACAAGCCCAGGCCTAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp TCCTCAGAGGTCCCAAATGTCGTCTTACCTTCAGATAAATGGCCACGGTCGGTAATGGAGGCAACGTCCTaGTTCTCATGTGGTCAAGAA +
Preference number: 4 (lower is better)
Translates to: SSEVPNVVLPSDKWPRSVMEATS*FSCGQE
Trigger: TTCTTGACCACATGAGAACCAGGACGTTGCCTCCAT...TACCGACCGTGGCCATTTATCTGAAGGTAAGACGACATTTGGGACCTCTGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR TCA 90 bp ATGACAGGCGTGATGATAATGGGTACCACAAAGTCTGGGGCTACAGGAAGGCTCGACAAGAACACTAAATaGTGTCTCTCTCTTGACGGT +
Preference number: 4 (lower is better)
Translates to: MTGVMIMGTTKSGATGRLDKNTK*CLSLDG
Trigger: ACCGTCAAGAGAGAGACATCATTTAGTGTTCTTGTC...GAGCCTTCCTGTAGCCCCAGACTTTGTGGTACCCATTATCATCACGCCTGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR TCA 90 bp AGGACCTTCCTTCATCATGCATCATCCTTGCCCCACCAAGAAGATGGGTCAATGCCGACAACAAAAAGATaGGCTAAAAGAGCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: RTFLHHASSLPHQEDGSMPTTKR*AKRALQ
Trigger: CTGCAGAGCTCTTTTAGCTCATCTTTTTGTTGTCGG...CATTGACCCATCTTCTTGGTGGGGCAAGGATGATGCATGATGAAGGAAGGTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR TCA 90 bp CTTTGCCTTAGGAAGCAACCCCATCACCGCAATTACCGTTTCTTATGTCACAGCTCTTTTCCTGCATTCTaGTCCTATCCAGCAACGGTC +
Preference number: 4 (lower is better)
Translates to: LCLRKQPHHRNYRFLCHSSFPAF*SYPATV
Trigger: GACCGTTGCTGGATAGGATCAGAATGCAGGAAAAGA...GCTGTGACATAAGAAACGGTAATTGCGGTGATGGGGTTGCTTCCTAAGGCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp ATGACAGGCGTGATGATAATGGGTACCACAAAGTCTGGGGCTACAGGAAGGCTCTTTGATTTTCCGCAGTaGGGTTTACAGGAACAGTGT +
Preference number: 4 (lower is better)
Translates to: MTGVMIMGTTKSGATGRLFDFPQ*GLQEQC
Trigger: ACACTGTTCCTGTAAACCGCACTGCGGAAAATCAAA...GAGCCTTCCTGTAGCCCCAGACTTTGTGGTACCCATTATCATCACGCCTGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp TCCATGGTGTCGCCGGCTTTCAGAATAAAGCCTTTTCTAGCATGTCTCGTTTTGTGCTACCATCCTCTGTaGTCTCAAAGAGGCCACTCT +
Preference number: 4 (lower is better)
Translates to: SMVSPAFRIKPFLACLVLCYHPL*SQRGHS
Trigger: AGAGTGGCCTCTTTGAGAGCACAGAGGATGGTAGCA...CAAAACGAGACATGCTAGAAAAGGCTTTATTCTGAAAGCCGGCGACACCATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp TTCTCTGCCTCTAGGGTAGTAAAAACAAAAACACAGCTCGTAAGACAGGGTGGATCCTTGCAGGTAGGGTaGTACCATCCTCTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: FSASRVVKTKTQLVRQGGSLQVG*YHPLCS
Trigger: AGAGCACAGAGGATGGTAGCACCCTACCTGCAAGGA...TCCACCCTGTCTTACGAGCTGTGTTTTTGTTTTTACTACCCTAGAGGCAGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp TTCTCTGCCTCTAGGGTAGTAAAAACAAAAACACAGCTCGTAAGACAGGGTGGAGAGTGGTCATCGTCGTaGTTCATGCCCAAGTTGTGG +
Preference number: 4 (lower is better)
Translates to: FSASRVVKTKTQLVRQGGEWSSS*FMPKLW
Trigger: CCACAACTTGGGCATGAACCACGACGATGACCACTC...TCCACCCTGTCTTACGAGCTGTGTTTTTGTTTTTACTACCCTAGAGGCAGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp TCCTCAGAGGTCCCAAATGTCGTCTTACCTTCAGATAAATGGCCACGGTCGGTATGTTTCTGCAGAAGGTaGCATTCATGCCAAACAGGA +
Preference number: 4 (lower is better)
Translates to: SSEVPNVVLPSDKWPRSVCFCRR*HSCQTG
Trigger: TCCTGTTTGGCATGAATGCCACCTTCTGCAGAAACA...TACCGACCGTGGCCATTTATCTGAAGGTAAGACGACATTTGGGACCTCTGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp CTTTGCCTTAGGAAGCAACCCCATCACCGCAATTACCGTTTCTTATGTCACAGCGCAGTAGAGTTCACATaGCTTATCGTCAACCACCAC +
Preference number: 4 (lower is better)
Translates to: LCLRKQPHHRNYRFLCHSAVEFT*LIVNHH
Trigger: GTGGTGGTTGACGATAAGCCATGTGAACTCTACTGC...GCTGTGACATAAGAAACGGTAATTGCGGTGATGGGGTTGCTTCCTAAGGCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp AGTGACACGTGTGCAAGCACAAAGGTACAGTACTCGAGGGACAGTACAGGGTATAAAGCCACTGGGATGTaGTACAGCATCTCTAAGGTA +
Preference number: 4 (lower is better)
Translates to: SDTCASTKVQYSRDSTGYKATGM*YSISKV
Trigger: TACCTTAGAGATGCTGTACCACATCCCAGTGGCTTT...ATACCCTGTACTGTCCCTCGAGTACTGTACCTTTGTGCTTGCACACGTGTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp CAGACTTTAGGGGAACTAATGGGGGTATCTGACAATAACCCAATCAATCCTTTTGACCGCTCACCATGGTaGCCAATGGACAACTTAGCG +
Preference number: 4 (lower is better)
Translates to: QTLGELMGVSDNNPINPFDRSPW*PMDNLA
Trigger: CGCTAAGTTGTCCATTGGGCACCATGGTGAGCGGTC...AAAAGGATTGATTGGGTTATTGTCAGATACCCCCATTAGTTCCCCTAAAGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp AGAGCTCTGCAGATGCAGACTTTAGGGGAACTAATGGGGGTATCTGACAATAACCATAGCGAACAGTTGTaGCTGCAATCTGGAACTCTC +
Preference number: 4 (lower is better)
Translates to: RALQMQTLGELMGVSDNNHSEQL*LQSGTL
Trigger: GAGAGTTCCAGATTGCAGGCACAACTGTTCGCTATG...GTTATTGTCAGATACCCCCATTAGTTCCCCTAAAGTCTGCATCTGCAGAGCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp AGTGACACGTGTGCAAGCACAAAGGTACAGTACTCGAGGGACAGTACAGGGTATATGAACAAAGAGTCCTaGGGTTTTTCTGGTTCGCTT +
Preference number: 4 (lower is better)
Translates to: SDTCASTKVQYSRDSTGYMNKES*GFSGSL
Trigger: AAGCGAACCAGAAAAACCGCAGGACTCTTTGTTCAT...ATACCCTGTACTGTCCCTCGAGTACTGTACCTTTGTGCTTGCACACGTGTCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp TCCATGGTGTCGCCGGCTTTCAGAATAAAGCCTTTTCTAGCATGTCTCGTTTTGCACAGAAATCTGTCCTaGTCACAAACACGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: SMVSPAFRIKPFLACLVLHRNLS*SQTRQH
Trigger: ATGCTGCCGTGTTTGTGACCAGGACAGATTTCTGTG...CAAAACGAGACATGCTAGAAAAGGCTTTATTCTGAAAGCCGGCGACACCATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp AAGCAACCCCATCACCGCAATTACCGTTTCTTATGTCACAGCACCTTGAAGAGAGTCCTGCGGTTTTTCTaGTTCGCTTTGATTTTCCGC +
Preference number: 4 (lower is better)
Translates to: KQPHHRNYRFLCHSTLKRVLRFF*FALIFR
Trigger: GCGGAAAATCAAAGCGAACCAGAAAAACCGCAGGAC...TCTCTTCAAGGTGCTGTGACATAAGAAACGGTAATTGCGGTGATGGGGTTGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp CAGACTTTAGGGGAACTAATGGGGGTATCTGACAATAACCCAATCAATCCTTTTGCTTTGAGCGACCCTTaGGACTGCGTGTCACGAGTT +
Preference number: 4 (lower is better)
Translates to: QTLGELMGVSDNNPINPFALSDP*DCVSRV
Trigger: AACTCGTGACACGCAGTCCCAAGGGTCGCTCAAAGC...AAAAGGATTGATTGGGTTATTGTCAGATACCCCCATTAGTTCCCCTAAAGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR TCA 90 bp CTGACACCCTCGGTTCTTTCCACAGAGCACCCACGGAAGTTTCTCAACACTTCTACAAGCTTGGTCACTTaGATGTTAATTTTAATCCCC +
Preference number: 4 (lower is better)
Translates to: LTPSVLSTEHPRKFLNTSTSLVT*MLILIP
Trigger: GGGGATTAAAATTAACATTCAAGTGACCAAGCTTGT...AGAAGTGTTGAGAAACTTCCGTGGGTGCTCTGTGGAAAGAACCGAGGGTGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR TCA 90 bp TCCTCAGAGGTCCCAAATGTCGTCTTACCTTCAGATAAATGGCCACGGTCGGTAATTTTGAGGGCTTTGTaGAAATGGGAATTCATGGGA +
Preference number: 4 (lower is better)
Translates to: SSEVPNVVLPSDKWPRSVILRAL*KWEFMG
Trigger: TCCCATGAATTCCCATTTTCACAAAGCCCTCAAAAT...TACCGACCGTGGCCATTTATCTGAAGGTAAGACGACATTTGGGACCTCTGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR TCA 90 bp GCCTCTAGGGTAGTAAAAACAAAAACACAGCTCGTAAGACAGGGTGGAGAAGGCCAGTTCATTTGGGGATaGAGAAAATTGAACCTCAGC +
Preference number: 4 (lower is better)
Translates to: ASRVVKTKTQLVRQGGEGQFIWG*RKLNLS
Trigger: GCTGAGGTTCAATTTTCTTCATCCCCAAATGAACTG...GCCTTCTCCACCCTGTCTTACGAGCTGTGTTTTTGTTTTTACTACCCTAGAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp AAGCAACCCCATCACCGCAATTACCGTTTCTTATGTCACAGCACCTTGAAGAGAGGTCAAGAAGGTAGATaGAGAGAAACGTGTGCTAAG +
Preference number: 4 (lower is better)
Translates to: KQPHHRNYRFLCHSTLKRGQEGR*RETCAK
Trigger: CTTAGCACACGTTTCTCTCCATCTACCTTCTTGACC...TCTCTTCAAGGTGCTGTGACATAAGAAACGGTAATTGCGGTGATGGGGTTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR TCA 90 bp TTCTCTGCCTCTAGGGTAGTAAAAACAAAAACACAGCTCGTAAGACAGGGTGGAGCAGGTGCTGACTTTTaGCTTGAGGAAGTTTTCAAG +
Preference number: 4 (lower is better)
Translates to: FSASRVVKTKTQLVRQGGAGADF*LEEVFK
Trigger: CTTGAAAACTTCCTCAAGTCAAAAGTCAGCACCTGC...TCCACCCTGTCTTACGAGCTGTGTTTTTGTTTTTACTACCCTAGAGGCAGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR TCA 90 bp TTCTCTGCCTCTAGGGTAGTAAAAACAAAAACACAGCTCGTAAGACAGGGTGGATTTTCTGGTTCGCTTTaGTTTTCCGCAGTGCGGTTT +
Preference number: 4 (lower is better)
Translates to: FSASRVVKTKTQLVRQGGFSGSL*FSAVRF
Trigger: AAACCGCACTGCGGAAAATCAAAGCGAACCAGAAAA...TCCACCCTGTCTTACGAGCTGTGTTTTTGTTTTTACTACCCTAGAGGCAGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR TCA 90 bp CTTAGGAAGCAACCCCATCACCGCAATTACCGTTTCTTATGTCACAGCACCTTGATTGAAGTTACTTTGTaGCTCATGCCTACTTTCTCC +
Preference number: 4 (lower is better)
Translates to: LRKQPHHRNYRFLCHSTLIEVTL*LMPTFS
Trigger: GGAGAAAGTAGGCATGAGTCACAAAGTAACTTCAAT...CAAGGTGCTGTGACATAAGAAACGGTAATTGCGGTGATGGGGTTGCTTCCTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR TCA 90 bp TCCATGGTGTCGCCGGCTTTCAGAATAAAGCCTTTTCTAGCATGTCTCGTTTTGAGAGAGGCTTCTTTCTaGTTTAAGCTAACTCTACGG +
Preference number: 4 (lower is better)
Translates to: SMVSPAFRIKPFLACLVLREASF*FKLTLR
Trigger: CCGTAGAGTTAGCTTAAATCAGAAAGAAGCCTCTCT...CAAAACGAGACATGCTAGAAAAGGCTTTATTCTGAAAGCCGGCGACACCATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CCA 90 bp TTCTCTGCCTCTAGGGTAGTAAAAACAAAAACACAGCTCGTAAGACAGGGTGGATTACCTTCAGATAAATaGCCACGGTCGGTAGAAAGC +
Preference number: 4 (lower is better)
Translates to: FSASRVVKTKTQLVRQGGLPSDK*PRSVES
Trigger: GCTTTCTACCGACCGTGGCCATTTATCTGAAGGTAA...TCCACCCTGTCTTACGAGCTGTGTTTTTGTTTTTACTACCCTAGAGGCAGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR GCA 90 bp TCCATGGTGTCGCCGGCTTTCAGAATAAAGCCTTTTCTAGCATGTCTCGTTTTGAAAGGACAATCGTATTaGCATAGAGGCTCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: SMVSPAFRIKPFLACLVLKGQSY*HRGSFP
Trigger: AGGAAAAGAGCCTCTATGGCAATACGATTGTCCTTT...CAAAACGAGACATGCTAGAAAAGGCTTTATTCTGAAAGCCGGCGACACCATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS GCA 90 bp CTGCACATGCTCCAGGCGCCCCACGGGCTCCAGTCTCCGTCCACATaGTCCGGGATGGGCGTCTTGCTCACGCACTCCCCCGCGCGGCAC +
Preference number: 5 (lower is better)
Translates to: LHMLQAPHGLQSPST*SGMGVLLTHSPARH
Trigger: GTGCCGCGCGGGGGAGTGCGTGAGCAAGACGCCCATCCCGGAGCATGTGGACGGAGACTGGAGCCCGTGGGGCGCCTGGAGCATGTGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268070.9
ENST00000378898.8
ENST00000568565.2
CDS GCA 90 bp GCGGGGCACTCGCTGCCGTGGCGCCCTGTGACCTTGTGCATGCACTaGACCACCCGGGACTGCAGGCCCTTCCCGCAGGTCGACGAGCAC +
Preference number: 5 (lower is better)
Translates to: AGHSLPWRPVTLCMH*TTRDCRPFPQVDEH
Trigger: GTGCTCGTCGACCTGCGGGAAGGGCCTGCAGTCCCGGGTGGTGCAGTGCATGCACAAGGTCACAGGGCGCCACGGCAGCGAGTGCCCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268070.9
ENST00000557896.1
ENST00000568565.2
CDS GCA 90 bp TTCGAGAGGGCGGGGCACTCGCTGCCGTGGCGCCCTGTGACCTTGTaGATGCACTGCACCACCCGGGACTGCAGGCCCTTCCCGCAGGTC +
Preference number: 5 (lower is better)
Translates to: FERAGHSLPWRPVTL*MHCTTRDCRPFPQV
Trigger: GACCTGCGGGAAGGGCCTGCAGTCCCGGGTGGTGCAGTGCATGCACAAGGTCACAGGGCGCCACGGCAGCGAGTGCCCCGCCCTCTCGAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268070.9
ENST00000557896.1
ENST00000568565.2
CDS CCA 90 bp TCCAGGCGCCCCACGGGCTCCAGTCTCCGTCCACATGCTCCGGGATaGGCGTCTTGCTCACGCACTCCCCCGCGCGGCACCACTTGTCTG +
Preference number: 5 (lower is better)
Translates to: SRRPTGSSLRPHAPG*ASCSRTPPRGTTCL
Trigger: CAGACAAGTGGTGCCGCGCGGGGGAGTGCGTGAGCAAGACGCCCATCCCGGAGCATGTGGACGGAGACTGGAGCCCGTGGGGCGCCTGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268070.9
ENST00000378898.8
ENST00000568565.2
CDS CCA 90 bp GAGCACTGTGACCACTCAGACGCCTCCCAGATGGACAGGCAGTCCTaGCCTTCACAGCTCTGCACTGCCGCCGGCCGGGGGCCCGGGCAG +
Preference number: 5 (lower is better)
Translates to: EHCDHSDASQMDRQS*PSQLCTAAGRGPGQ
Trigger: CTGCCCGGGCCCCCGGCCGGCGGCAGTGCAGAGCTGTGAAGGCCAGGACTGCCTGTCCATCTGGGAGGCGTCTGAGTGGTCACAGTGCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268070.9
ENST00000568565.2
CDS GCA 90 bp CCCACGGGCTCCAGTCTCCGTCCACATGCTCCGGGATGGGCGTCTTaGTCACGCACTCCCCCGCGCGGCACCACTTGTCTGCCCCACACT +
Preference number: 5 (lower is better)
Translates to: PTGSSLRPHAPGWAS*SRTPPRGTTCLPHT
Trigger: AGTGTGGGGCAGACAAGTGGTGCCGCGCGGGGGAGTGCGTGAGCAAGACGCCCATCCCGGAGCATGTGGACGGAGACTGGAGCCCGTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268070.9
ENST00000378898.8
ENST00000568565.2
CDS GCA 90 bp GGCTCCACGGGCCTGCCACCCACCGTGACTGGCAGGGGTGCAAGTTaGACCTTCGGACCTGGGGCTCTGGGCGGCTTGCTTGAGGGCAGT +
Preference number: 5 (lower is better)
Translates to: GSTGLPPTVTGRGAS*TFGPGALGGLLEGS
Trigger: ACTGCCCTCAAGCAAGCCGCCCAGAGCCCCAGGTCCGAAGGTGCAACTTGCACCCCTGCCAGTCACGGTGGGTGGCAGGCCCGTGGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268070.9
ENST00000568565.2
CDS-3UTR CAA 90 bp TGGGGGCGTGGCCACAAGGCTGGTAGGCTTGCGGGTGGGTGGGTTTCAGACCTGTCCGGGATGGGCGTCTaGCTCACGCACTCCCCCGCG +
Preference number: 5 (lower is better)
Translates to: WGRGHKAGRLAGGWVSDLSGMGV*LTHSPA
Trigger: CGCGGGGGAGTGCGTGAGCAAGACGCCCATCCCGGA...CAGGTCTGAAACCCACCCACCCGCAAGCCTACCAGCCTTGTGGCCACGCCCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS GCA 90 bp CCGTGGCGCCCTGTGACCTTGTGCATGCACTGCACCACCCGGGACTaGAGGCCCTTCCCGCAGGTCGACGAGCACGTAGACCAGTCCCCA +
Preference number: 5 (lower is better)
Translates to: PWRPVTLCMHCTTRD*RPFPQVDEHVDQSP
Trigger: TGGGGACTGGTCTACGTGCTCGTCGACCTGCGGGAAGGGCCTGCAGTCCCGGGTGGTGCAGTGCATGCACAAGGTCACAGGGCGCCACGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268070.9
ENST00000568565.2
CDS CCA 90 bp GCTGTCAGCAGGCCTTTCTTCTTGGGGCTCAGCCGGTCGTGTGCCTaGCACTGCTGGTCCCGGAAGCTGGGCAGACCCTTGGGGCAGGGC +
Preference number: 5 (lower is better)
Translates to: AVSRPFFLGLSRSCA*HCWSRKLGRPLGQG
Trigger: GCCCTGCCCCAAGGGTCTGCCCAGCTTCCGGGACCAGCAGTGCCAGGCACACGACCGGCTGAGCCCCAAGAAGAAAGGCCTGCTGACAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268070.9
ENST00000378898.8
ENST00000568565.2
CDS GCA 90 bp GATGGGCGTCTTGCTCACGCACTCCCCCGCGCGGCACCACTTGTCTaGCCCACACTCGGTGCCATCCAGGGGAGGGTCCAGCTTGGTCTT +
Preference number: 5 (lower is better)
Translates to: DGRLAHALPRAAPLV*PTLGAIQGRVQLGL
Trigger: AAGACCAAGCTGGACCCTCCCCTGGATGGCACCGAGTGTGGGGCAGACAAGTGGTGCCGCGCGGGGGAGTGCGTGAGCAAGACGCCCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268070.9
ENST00000378898.8
ENST00000568565.2
CDS GCA 90 bp AGCAGGCCTTTCTTCTTGGGGCTCAGCCGGTCGTGTGCCTGGCACTaGTGGTCCCGGAAGCTGGGCAGACCCTTGGGGCAGGGCAGGTTC +
Preference number: 5 (lower is better)
Translates to: SRPFFLGLSRSCAWH*WSRKLGRPLGQGRF
Trigger: GAACCTGCCCTGCCCCAAGGGTCTGCCCAGCTTCCGGGACCAGCAGTGCCAGGCACACGACCGGCTGAGCCCCAAGAAGAAAGGCCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268070.9
ENST00000378898.8
ENST00000568565.2
CDS GCA 90 bp CACGGCTGTCAGCAGGCCTTTCTTCTTGGGGCTCAGCCGGTCGTGTaGCTGGCACTGCTGGTCCCGGAAGCTGGGCAGACCCTTGGGGCA +
Preference number: 5 (lower is better)
Translates to: HGCQQAFLLGAQPVV*LALLVPEAGQTLGA
Trigger: TGCCCCAAGGGTCTGCCCAGCTTCCGGGACCAGCAGTGCCAGGCACACGACCGGCTGAGCCCCAAGAAGAAAGGCCTGCTGACAGCCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268070.9
ENST00000378898.8
ENST00000568565.2
CDS GCA 90 bp CCGTGGCGCCCTGTGACCTTGTGCATGCACTGCACCACCCGGGACTaGAGGCCCTTCCCGCAGGTCGACGAGCACTGCAGAGACAGGACA +
Preference number: 5 (lower is better)
Translates to: PWRPVTLCMHCTTRD*RPFPQVDEHCRDRT
Trigger: TGTCCTGTCTCTGCAGTGCTCGTCGACCTGCGGGAAGGGCCTGCAGTCCCGGGTGGTGCAGTGCATGCACAAGGTCACAGGGCGCCACGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557896.1
CDS CCA 90 bp AGGCCTTTCTTCTTGGGGCTCAGCCGGTCGTGTGCCTGGCACTGCTaGTCCCGGAAGCTGGGCAGACCCTTGGGGCAGGGCAGGTTCTCG +
Preference number: 5 (lower is better)
Translates to: RPFFLGLSRSCAWHC*SRKLGRPLGQGRFS
Trigger: CGAGAACCTGCCCTGCCCCAAGGGTCTGCCCAGCTTCCGGGACCAGCAGTGCCAGGCACACGACCGGCTGAGCCCCAAGAAGAAAGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268070.9
ENST00000378898.8
ENST00000568565.2
CDS-3UTR CAA 90 bp GTTCCTCCGCTCCCGCCAGTCCCGCGAAGGCCTGCCCCACGTCGGCTTCTTCTTGGGCCCTGGGAGTTGTaGAGGGGCTGGATTAGCACC +
Preference number: 5 (lower is better)
Translates to: VPPLPPVPRRPAPRRLLLGPWEL*RGWIST
Trigger: GGTGCTAATCCAGCCCCTCAACAACTCCCAGGGCCC...AAGAAGAAGCCGACGTGGGGCAGGCCTTCGCGGGACTGGCGGGAGCGGAGGAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558960.1
CDS GCA 90 bp ACGTGTGTGCCGTTCTGCAGCTGGTACACGCAGGTCACCTCCCGGTaGTGGAAGCCTTTCTCACAGGTCGCCGAGCAGGGGCTCCACGGG +
Preference number: 5 (lower is better)
Translates to: TCVPFCSWYTQVTSR*WKPFSQVAEQGLHG
Trigger: CCCGTGGAGCCCCTGCTCGGCGACCTGTGAGAAAGGCTTCCAGCACCGGGAGGTGACCTGCGTGTACCAGCTGCAGAACGGCACACACGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268070.9
ENST00000568565.2
CDS CCA 90 bp GGTCGTGTGCCTGGCACTGCTGGTCCCGGAAGCTGGGCAGACCCTTaGGGCAGGGCAGGTTCTCGCAGACCGCATGTTCTACACTGGCAC +
Preference number: 5 (lower is better)
Translates to: GRVPGTAGPGSWADP*GRAGSRRPHVLHWH
Trigger: GTGCCAGTGTAGAACATGCGGTCTGCGAGAACCTGCCCTGCCCCAAGGGTCTGCCCAGCTTCCGGGACCAGCAGTGCCAGGCACACGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268070.9
ENST00000378898.8
ENST00000568565.2
CDS GCA 90 bp CTGGCCAGAGGGATCCTGGTGGTGCAGCTTCGGGCCAGCTGTGTCTaGTATGGTGTCTCCCAGGCACTCTCACCCAGAGCACAGGCCCAG +
Preference number: 5 (lower is better)
Translates to: LARGILVVQLRASCV*YGVSQALSPRAQAQ
Trigger: CTGGGCCTGTGCTCTGGGTGAGAGTGCCTGGGAGACACCATAGCAGACACAGCTGGCCCGAAGCTGCACCACCAGGATCCCTCTGGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560486.2
CDS CCA 90 bp ACGGCAGCATCCACCAGGGGCGGGTCGTCCTTCCCGCCGGGAACCTaGTTATTGCCGAGGTATCGCGCTCCTCCATACTCCTCGTTCTGC +
Preference number: 5 (lower is better)
Translates to: TAASTRGGSSFPPGT*LLPRYRAPPYSSFC
Trigger: GCAGAACGAGGAGTATGGAGGAGCGCGATACCTCGGCAATAACCAGGTTCCCGGCGGGAAGGACGACCCGCCCCTGGTGGATGCTGCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268070.9
ENST00000378898.8
ENST00000560486.2
ENST00000568565.2
CDS CCA 90 bp CAGAGGGATCCTGGTGGTGCAGCTTCGGGCCAGCTGTGTCTGCTATaGTGTCTCCCAGGCACTCTCACCCAGAGCACAGGCCCAGGCTCG +
Preference number: 5 (lower is better)
Translates to: QRDPGGAASGQLCLL*CLPGTLTQSTGPGS
Trigger: CGAGCCTGGGCCTGTGCTCTGGGTGAGAGTGCCTGGGAGACACCATAGCAGACACAGCTGGCCCGAAGCTGCACCACCAGGATCCCTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560486.2
CDS-3UTR CAA 90 bp GGCCACCACCAGGGTCTCCACCGTGTGCTCGCTGGTGAGCCGGATAGCGTTCCTAATGGGCCCTGGGAGTaGTTGAGGGGCTGGATTAGC +
Preference number: 5 (lower is better)
Translates to: GHHQGLHRVLAGEPDSVPNGPWE*LRGWIS
Trigger: GCTAATCCAGCCCCTCAACAACTCCCAGGGCCCATT...AGGAACGCTATCCGGCTCACCAGCGAGCACACGGTGGAGACCCTGGTGGTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558960.1
CDS-3UTR CAA 90 bp TGGGGCTACAGGAAGGCTCGGCGGGTGTGCAGCAGTGCCAGCCAGATGGCGTTCGGGGAGGTGATGGTGTaGGCGTTGATCCTGTCGTTG +
Preference number: 5 (lower is better)
Translates to: WGYRKARRVCSSASQMAFGEVMV*ALILSL
Trigger: CAACGACAGGATCAACGCCAACACCATCACCTCCCC...GAACGCCATCTGGCTGGCACTGCTGCACACCCGCCGAGCCTTCCTGTAGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS TCA 90 bp GGCCTCCTCGGCTCTCGGCCTCGTGGATGCGTCGCATTTCCCTTGTaGGTTGGTGCACGCCACGGTCCGTTTCCACACCCCTTTACCACA +
Preference number: 5 (lower is better)
Translates to: GLLGSRPRGCVAFPL*VGARHGPFPHPFTT
Trigger: TGTGGTAAAGGGGTGTGGAAACGGACCGTGGCGTGCACCAACTCACAAGGGAAATGCGACGCATCCACGAGGCCGAGAGCCGAGGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268070.9
ENST00000568565.2
CDS GCA 90 bp CGGCTCTCGGCCTCGTGGATGCGTCGCATTTCCCTTGTGAGTTGGTaGACGCCACGGTCCGTTTCCACACCCCTTTACCACAGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: RLSASWMRRISLVSW*TPRSVSTPLYHSWQ
Trigger: CTGCCAGCTGTGGTAAAGGGGTGTGGAAACGGACCGTGGCGTGCACCAACTCACAAGGGAAATGCGACGCATCCACGAGGCCGAGAGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268070.9
ENST00000568565.2
CDS CCA 90 bp CCTCGGCTCTCGGCCTCGTGGATGCGTCGCATTTCCCTTGTGAGTTaGTGCACGCCACGGTCCGTTTCCACACCCCTTTACCACAGCTGG +
Preference number: 5 (lower is better)
Translates to: PRLSASWMRRISLVS*CTPRSVSTPLYHSW
Trigger: CCAGCTGTGGTAAAGGGGTGTGGAAACGGACCGTGGCGTGCACCAACTCACAAGGGAAATGCGACGCATCCACGAGGCCGAGAGCCGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268070.9
ENST00000568565.2
CDS GCA 90 bp GGTATTATGCTGGAGGGGAAGGTCTGGCCAGAGGGATCCTGGTGGTaGAGCTTCGGGCCAGCTGTGTCTGCTATGGTGTCTCCCAGGCAC +
Preference number: 5 (lower is better)
Translates to: GIMLEGKVWPEGSWW*SFGPAVSAMVSPRH
Trigger: GTGCCTGGGAGACACCATAGCAGACACAGCTGGCCCGAAGCTGCACCACCAGGATCCCTCTGGCCAGACCTTCCCCTCCAGCATAATACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560486.2
CDS CCA 90 bp CGCTCCCCTCCGCCGCACTGCACACTGCACCCTTCCCAGCCGCTGTaGGTCCAGATGAACAAAGAGTCCTGCGGTTTTTCTGGTTCGCTT +
Preference number: 5 (lower is better)
Translates to: RSPPPHCTLHPSQPL*VQMNKESCGFSGSL
Trigger: AAGCGAACCAGAAAAACCGCAGGACTCTTTGTTCATCTGGACCCACAGCGGCTGGGAAGGGTGCAGTGTGCAGTGCGGCGGAGGGGAGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268070.9
ENST00000568565.2
CDS CCA 90 bp GGGTGCCCCGAGGAGTTAGATGGTATTATGCTGGAGGGGAAGGTCTaGCCAGAGGGATCCTGGTGGTGCAGCTTCGGGCCAGCTGTGTCT +
Preference number: 5 (lower is better)
Translates to: GCPEELDGIMLEGKV*PEGSWWCSFGPAVS
Trigger: AGACACAGCTGGCCCGAAGCTGCACCACCAGGATCCCTCTGGCCAGACCTTCCCCTCCAGCATAATACCATCTAACTCCTCGGGGCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560486.2
CDS GCA 90 bp GCAGGGGTGCAAGTTGCACCTTCGGACCTGGGGCTCTGGGCGGCTTaGTTGAGGGCAGTCACTGTCGTTCACCAGAGTTGTGGTCTTGTT +
Preference number: 5 (lower is better)
Translates to: AGVQVAPSDLGLWAA*LRAVTVVHQSCGLV
Trigger: AACAAGACCACAACTCTGGTGAACGACAGTGACTGCCCTCAAGCAAGCCGCCCAGAGCCCCAGGTCCGAAGGTGCAACTTGCACCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268070.9
ENST00000568565.2
CDS CCA 90 bp GATGGTATTATGCTGGAGGGGAAGGTCTGGCCAGAGGGATCCTGGTaGTGCAGCTTCGGGCCAGCTGTGTCTGCTATGGTGTCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: DGIMLEGKVWPEGSW*CSFGPAVSAMVSPR
Trigger: CCTGGGAGACACCATAGCAGACACAGCTGGCCCGAAGCTGCACCACCAGGATCCCTCTGGCCAGACCTTCCCCTCCAGCATAATACCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560486.2
CDS CCA 90 bp GTTTCCAGACCCTTTCAAGGGGCCCTGCAAGCTACCCAGCAGCCATaGCCTCACGAGCGTGGGAAGCCTGGGAGCGTAACATCAAGTTCC +
Preference number: 5 (lower is better)
Translates to: VSRPFQGALQATQQP*PHERGKPGSVTSSS
Trigger: GGAACTTGATGTTACGCTCCCAGGCTTCCCACGCTCGTGAGGCCATGGCTGCTGGGTAGCTTGCAGGGCCCCTTGAAAGGGTCTGGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560486.2
CDS-3UTR CAA 90 bp GCTGATCCTCAAAGGCAGCACAGCTCCTGCTGGGCTTGCGGGAACTCTTGCATTGGGCCCTGGGAGTTGTaGAGGGGCTGGATTAGCACC +
Preference number: 5 (lower is better)
Translates to: ADPQRQHSSCWACGNSCIGPWEL*RGWIST
Trigger: GGTGCTAATCCAGCCCCTCAACAACTCCCAGGGCCC...AATGCAAGAGTTCCCGCAAGCCCAGCAGGAGCTGTGCTGCCTTTGAGGATCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561355.2
CDS-3UTR CAA 90 bp GCAGCACAGCTCCTGCTGGGCTTGCGGGAACTCTTGCATTGGGAGCCCTGGTGGGGGGTCAAGGACCATTaGCGCCTGATCAGATGTTCT +
Preference number: 5 (lower is better)
Translates to: AAQLLLGLRELLHWEPWWGVKDH*RLIRCS
Trigger: AGAACATCTGATCAGGCGCAAATGGTCCTTGACCCC...CCACCAGGGCTCCCAATGCAAGAGTTCCCGCAAGCCCAGCAGGAGCTGTGCTGC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000561355.2
CDS-3UTR CAA 90 bp GGCATATCTGGAGGCCCCGGGGCCCATGCAGGAGACCAAGCTAAGGCTTCCTTAACCAAGAGAGGTCACTaGGGTTCCGGCCTTTCACCC +
Preference number: 5 (lower is better)
Translates to: GISGGPGAHAGDQAKASLTKRGH*GSGLSP
Trigger: GGGTGAAAGGCCGGAACCCAAGTGACCTCTCTTGGT...TAAGGAAGCCTTAGCTTGGTCTCCTGCATGGGCCCCGGGGCCTCCAGATATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CAA 90 bp GGCATATCTGGAGGCCCCGGGGCCCATGCAGGAGACCAAGCTAAGGCTTCCTTACATTTCCCTTGTGAGTaGGTGCACGCCACGGTCCGT +
Preference number: 5 (lower is better)
Translates to: GISGGPGAHAGDQAKASLHFPCE*VHATVR
Trigger: ACGGACCGTGGCGTGCACCAACTCACAAGGGAAATG...TAAGGAAGCCTTAGCTTGGTCTCCTGCATGGGCCCCGGGGCCTCCAGATATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS TCA 90 bp GGGTGCAAGTTGCACCTTCGGACCTGGGGCTCTGGGCGGCTTGCTTaGGGGCAGTCACTGTCGTTCACCAGAGTTGTGGTCTTGTTGACA +
Preference number: 5 (lower is better)
Translates to: GCKLHLRTWGSGRLA*GQSLSFTRVVVLLT
Trigger: TGTCAACAAGACCACAACTCTGGTGAACGACAGTGACTGCCCTCAAGCAAGCCGCCCAGAGCCCCAGGTCCGAAGGTGCAACTTGCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268070.9
ENST00000568565.2
CDS TCA 90 bp CGTGGGAAGCCTGGGAGCGTAACATCAAGTTCCATGGATACTTGCTaGGGCTTCACCACGCGCAAAGCCTGGCAAGAGGGTCCCCTGGCA +
Preference number: 5 (lower is better)
Translates to: RGKPGSVTSSSMDTC*GFTTRKAWQEGPLA
Trigger: TGCCAGGGGACCCTCTTGCCAGGCTTTGCGCGTGGTGAAGCCTCAGCAAGTATCCATGGAACTTGATGTTACGCTCCCAGGCTTCCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560486.2
CDS CCA 90 bp CTTGCTGAGGCTTCACCACGCGCAAAGCCTGGCAAGAGGGTCCCCTaGCAGAAGGTAAAGGGAAGGGTGCCCCGAGGAGTTAGATGGTAT +
Preference number: 5 (lower is better)
Translates to: LAEASPRAKPGKRVP*QKVKGRVPRGVRWY
Trigger: ATACCATCTAACTCCTCGGGGCACCCTTCCCTTTACCTTCTGCCAGGGGACCCTCTTGCCAGGCTTTGCGCGTGGTGAAGCCTCAGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560486.2
CDS CCA 90 bp TCAAGGGGCCCTGCAAGCTACCCAGCAGCCATGGCCTCACGAGCGTaGGAAGCCTGGGAGCGTAACATCAAGTTCCATGGATACTTGCTG +
Preference number: 5 (lower is better)
Translates to: SRGPASYPAAMASRA*EAWERNIKFHGYLL
Trigger: CAGCAAGTATCCATGGAACTTGATGTTACGCTCCCAGGCTTCCCACGCTCGTGAGGCCATGGCTGCTGGGTAGCTTGCAGGGCCCCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560486.2
CDS-3UTR CAA 90 bp GGCATATCTGGAGGCCCCGGGGCCCATGCAGGAGACCAAGCTAAGGCTTCCTTAGCAGCGGTAGTTTGGTaGGTCCCTTGGCAGAGATCT +
Preference number: 5 (lower is better)
Translates to: GISGGPGAHAGDQAKASLAAVVW*VPWQRS
Trigger: AGATCTCTGCCAAGGGACCAACCAAACTACCGCTGC...TAAGGAAGCCTTAGCTTGGTCTCCTGCATGGGCCCCGGGGCCTCCAGATATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CAA 90 bp TGGGGGCGTGGCCACAAGGCTGGTAGGCTTGCGGGTGGGTGGGTTTCAGACCTGTTATGTCACAGCACCTaGAAGAGAGGCCCTTCTGTT +
Preference number: 5 (lower is better)
Translates to: WGRGHKAGRLAGGWVSDLLCHST*KRGPSV
Trigger: AACAGAAGGGCCTCTCTTCAAGGTGCTGTGACATAA...CAGGTCTGAAACCCACCCACCCGCAAGCCTACCAGCCTTGTGGCCACGCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS TCA 90 bp TTATTGCCGAGGTATCGCGCTCCTCCATACTCCTCGTTCTGCCAGTaGCAGAAGCTCTCCAGGGACCGCTCACCATGGTGCCCAATGGAC +
Preference number: 5 (lower is better)
Translates to: LLPRYRAPPYSSFCQ*QKLSRDRSPWCPMD
Trigger: GTCCATTGGGCACCATGGTGAGCGGTCCCTGGAGAGCTTCTGTCACTGGCAGAACGAGGAGTATGGAGGAGCGCGATACCTCGGCAATAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268070.9
ENST00000378898.8
ENST00000560486.2
ENST00000568565.2
CDS CCA 90 bp GACCATTTGCGCCTGATCAGATGTTCTCGTCCACTGAATGGGCCCTaGGAGTTGTTGAGGGGCTGGATTAGCACCTGCTCCTGCCCAAGC +
Preference number: 5 (lower is better)
Translates to: DHLRLIRCSRPLNGP*ELLRGWISTCSCPS
Trigger: GCTTGGGCAGGAGCAGGTGCTAATCCAGCCCCTCAACAACTCCCAGGGCCCATTCAGTGGACGAGAACATCTGATCAGGCGCAAATGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268070.9
ENST00000378898.8
ENST00000558960.1
ENST00000561355.2
ENST00000568565.2
CDS CCA 90 bp TTAGATGGTATTATGCTGGAGGGGAAGGTCTGGCCAGAGGGATCCTaGTGGTGCAGCTTCGGGCCAGCTGTGTCTGCTATGGTGTCTCCC +
Preference number: 5 (lower is better)
Translates to: LDGIMLEGKVWPEGS*WCSFGPAVSAMVSP
Trigger: GGGAGACACCATAGCAGACACAGCTGGCCCGAAGCTGCACCACCAGGATCCCTCTGGCCAGACCTTCCCCTCCAGCATAATACCATCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560486.2
CDS CCA 90 bp CCTGCAAGCTACCCAGCAGCCATGGCCTCACGAGCGTGGGAAGCCTaGGAGCGTAACATCAAGTTCCATGGATACTTGCTGAGGCTTCAC +
Preference number: 5 (lower is better)
Translates to: PASYPAAMASRAWEA*ERNIKFHGYLLRLH
Trigger: GTGAAGCCTCAGCAAGTATCCATGGAACTTGATGTTACGCTCCCAGGCTTCCCACGCTCGTGAGGCCATGGCTGCTGGGTAGCTTGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560486.2
CDS-3UTR CAA 90 bp CTTTGCCTTAGGAAGCAACCCCATCACCGCAATTACCGTTTCTTATGTCACAGCCCCGCGCGGCACCACTaGTCTGCCCCACACTCGGTG +
Preference number: 5 (lower is better)
Translates to: LCLRKQPHHRNYRFLCHSPARHH*SAPHSV
Trigger: CACCGAGTGTGGGGCAGACAAGTGGTGCCGCGCGGG...GCTGTGACATAAGAAACGGTAATTGCGGTGATGGGGTTGCTTCCTAAGGCAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CAA 90 bp GCATCTCTAAGGTACAAAGCTTTAGGAAGTGCAGGCCAGAGTGGATGTTCCCGGCCCTTACCCGAGTCTTaGAGAGCTGTCCCCCGGGCG +
Preference number: 5 (lower is better)
Translates to: ASLRYKALGSAGQSGCSRPLPES*RAVPRA
Trigger: CGCCCGGGGGACAGCTCTCAAAGACTCGGGTAAGGG...CCGGGAACATCCACTCTGGCCTGCACTTCCTAAAGCTTTGTACCTTAGAGATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS TCA 90 bp AAGAGAGGTCACTTGGGTTCCGGCCTTTCACCCACTCTCCTGACATaGTGTGGGACCTGCCAGCGCAAGATGAGTGGTCATCGTCGTGGT +
Preference number: 5 (lower is better)
Translates to: KRGHLGSGLSPTLLT*CGTCQRKMSGHRRG
Trigger: ACCACGACGATGACCACTCATCTTGCGCTGGCAGGTCCCACATCATGTCAGGAGAGTGGGTGAAAGGCCGGAACCCAAGTGACCTCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268070.9
ENST00000378898.8
ENST00000568565.2
CDS CCA 90 bp AGGTCACTTGGGTTCCGGCCTTTCACCCACTCTCCTGACATGATGTaGGACCTGCCAGCGCAAGATGAGTGGTCATCGTCGTGGTTCATG +
Preference number: 5 (lower is better)
Translates to: RSLGFRPFTHSPDMM*DLPAQDEWSSSWFM
Trigger: CATGAACCACGACGATGACCACTCATCTTGCGCTGGCAGGTCCCACATCATGTCAGGAGAGTGGGTGAAAGGCCGGAACCCAAGTGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268070.9
ENST00000378898.8
ENST00000568565.2
CDS CCA 90 bp CTGGCTCAGCAGCTCCTGCTAGACATGTCATGCTCACGTCCTCCATaGCAGCCACCTAGCCACCTGTTTGTCAGGGAACGTCTTGGAGAA +
Preference number: 5 (lower is better)
Translates to: LAQQLLLDMSCSRPP*QPPSHLFVRERLGE
Trigger: TTCTCCAAGACGTTCCCTGACAAACAGGTGGCTAGGTGGCTGCCATGGAGGACGTGAGCATGACATGTCTAGCAGGAGCTGCTGAGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560486.2
CDS-3UTR CAA 90 bp AGTGACACGTGTGCAAGCACAAAGGTACAGTACTCGAGGGACAGTACAGGGTATACCAAGTGGCAGGTCTaGCCGTCCCCGCTGCAGACC +
Preference number: 5 (lower is better)
Translates to: SDTCASTKVQYSRDSTGYTKWQV*PSPLQT
Trigger: GGTCTGCAGCGGGGACGGCAAGACCTGCCACTTGGT...ATACCCTGTACTGTCCCTCGAGTACTGTACCTTTGTGCTTGCACACGTGTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CAA 90 bp TCCTCAGAGGTCCCAAATGTCGTCTTACCTTCAGATAAATGGCCACGGTCGGTATGGCAGGGGTGCAAGTaGCACCTTCGGACCTGGGGC +
Preference number: 5 (lower is better)
Translates to: SSEVPNVVLPSDKWPRSVWQGCK*HLRTWG
Trigger: GCCCCAGGTCCGAAGGTGCAACTTGCACCCCTGCCA...TACCGACCGTGGCCATTTATCTGAAGGTAAGACGACATTTGGGACCTCTGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CAA 90 bp CAAGGTATGGACGCCAAGCTGCAGAGGCCACAGGTAGACGCTCCACGTTGTTGTAGGCCCCCAAATTCTTaGACATTGAGCGGTGGGGTC +
Preference number: 5 (lower is better)
Translates to: QGMDAKLQRPQVDAPRCCRPPNS*TLSGGV
Trigger: GACCCCACCGCTCAATGTCAAAGAATTTGGGGGCCT...ACAACAACGTGGAGCGTCTACCTGTGGCCTCTGCAGCTTGGCGTCCATACCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561355.2
CDS TCA 90 bp TTGCTTGAGGGCAGTCACTGTCGTTCACCAGAGTTGTGGTCTTGTTaGCAATCCGTGTACACGAGACGATGGTTCTGCGCTCCCCTCCGC +
Preference number: 5 (lower is better)
Translates to: LLEGSHCRSPELWSC*QSVYTRRWFCAPLR
Trigger: GCGGAGGGGAGCGCAGAACCATCGTCTCGTGTACACGGATTGTCAACAAGACCACAACTCTGGTGAACGACAGTGACTGCCCTCAAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268070.9
ENST00000568565.2
CDS TCA 90 bp GCACCTCCAGATCACTCCAGCCTCCAGATTTCAAGTCCTCCCAGGTaGGGCCCAGACACTGTGGAACTGTTAGAACCTTGCAGAGCTGCT +
Preference number: 5 (lower is better)
Translates to: APPDHSSLQISSPPR*GPDTVELLEPCRAA
Trigger: AGCAGCTCTGCAAGGTTCTAACAGTTCCACAGTGTCTGGGCCTCACCTGGGAGGACTTGAAATCTGGAGGCTGGAGTGATCTGGAGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561355.2
CDS-3UTR CAA 90 bp TCCTCAGAGGTCCCAAATGTCGTCTTACCTTCAGATAAATGGCCACGGTCGGTAGGGCCCTGGGAGTTGTaGAGGGGCTGGATTAGCACC +
Preference number: 5 (lower is better)
Translates to: SSEVPNVVLPSDKWPRSVGPWEL*RGWIST
Trigger: GGTGCTAATCCAGCCCCTCAACAACTCCCAGGGCCC...TACCGACCGTGGCCATTTATCTGAAGGTAAGACGACATTTGGGACCTCTGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CAA 90 bp CCCGCGAAGGCCTGCCCCACGTCGGCTTCTTCTTTTCTGTTAGAACCTTGCAGAGGGGTCAAGGACCATTaGCGCCTGATCAGATGTTCT +
Preference number: 5 (lower is better)
Translates to: PAKACPTSASSFLLEPCRGVKDH*RLIRCS
Trigger: AGAACATCTGATCAGGCGCAAATGGTCCTTGACCCC...TCTGCAAGGTTCTAACAGAAAAGAAGAAGCCGACGTGGGGCAGGCCTTCGCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558960.1
CDS-3UTR CAA 90 bp CAGACTCTCTTGGAACATTCTTCCCATGCGGGTGGTATGAACTGCGTGGCACTGAGGGGAGGGTCCAGCTaGGTCTTGCAGGATGTGTCT +
Preference number: 5 (lower is better)
Translates to: QTLLEHSSHAGGMNCVALRGGSS*VLQDVS
Trigger: AGACACATCCTGCAAGACCAAGCTGGACCCTCCCCT...CAGTGCCACGCAGTTCATACCACCCGCATGGGAAGAATGTTCCAAGAGAGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CAA 90 bp CTTTGCCTTAGGAAGCAACCCCATCACCGCAATTACCGTTTCTTATGTCACAGCGGGGCTCTGGGCGGCTaGCTTGAGGGCAGTCACTGT +
Preference number: 5 (lower is better)
Translates to: LCLRKQPHHRNYRFLCHSGALGG*LEGSHC
Trigger: ACAGTGACTGCCCTCAAGCAAGCCGCCCAGAGCCCC...GCTGTGACATAAGAAACGGTAATTGCGGTGATGGGGTTGCTTCCTAAGGCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CAA 90 bp AATGTCCAAAGCTGGGCTGAAGAGCCCCATACCCGGTATGCTGTCTCTGAACTAGCGGGAACTCTTGCATaGGGAGCCCTGGTGGCCATA +
Preference number: 5 (lower is better)
Translates to: NVQSWAEEPHTRYAVSELAGTLA*GALVAI
Trigger: TATGGCCACCAGGGCTCCCAATGCAAGAGTTCCCGC...TAGTTCAGAGACAGCATACCGGGTATGGGGCTCTTCAGCCCAGCTTTGGACATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561355.2
CDS-3UTR CAA 90 bp GCGGTGGGGTCTATCTCTCTGCCCTTGAACCTGGGTAGGTTTCTAACCGCTTCACTGCACAGTAGCCCTTaGTCACTAGCGGTGTCACCT +
Preference number: 5 (lower is better)
Translates to: AVGSISLPLNLGRFLTASLHSSP*SLAVSP
Trigger: AGGTGACACCGCTAGTGACAAAGGGCTACTGTGCAG...TGAAGCGGTTAGAAACCTACCCAGGTTCAAGGGCAGAGAGATAGACCCCACCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561355.2
CDS-3UTR CAA 90 bp AGGACCTTCCTTCATCATGCATCATCCTTGCCCCACCAAGAAGATGGGTCAATGAGCAGGCCTTTCTTCTaGGGGCTCAGCCGGTCGTGT +
Preference number: 5 (lower is better)
Translates to: RTFLHHASSLPHQEDGSMSRPFF*GLSRSC
Trigger: ACACGACCGGCTGAGCCCCAAGAAGAAAGGCCTGCT...CATTGACCCATCTTCTTGGTGGGGCAAGGATGATGCATGATGAAGGAAGGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CAA 90 bp ATGACAGGCGTGATGATAATGGGTACCACAAAGTCTGGGGCTACAGGAAGGCTCCCGCATCTGTCCTCTTaGGCTGCAGACCCGATGATG +
Preference number: 5 (lower is better)
Translates to: MTGVMIMGTTKSGATGRLPHLSS*AADPMM
Trigger: CATCATCGGGTCTGCAGCCAAAGAGGACAGATGCGG...GAGCCTTCCTGTAGCCCCAGACTTTGTGGTACCCATTATCATCACGCCTGTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CAA 90 bp AGAGCTCTGCAGATGCAGACTTTAGGGGAACTAATGGGGGTATCTGACAATAACCCCTGCCCGGCCTCCTaGCAGGTAGGGTGCTACCAT +
Preference number: 5 (lower is better)
Translates to: RALQMQTLGELMGVSDNNPCPAS*QVGCYH
Trigger: ATGGTAGCACCCTACCTGCAAGGAGGCCGGGCAGGG...GTTATTGTCAGATACCCCCATTAGTTCCCCTAAAGTCTGCATCTGCAGAGCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS TCA 90 bp CCAACAGAGGGGGAAGTGTCCAATGTCCAGCTCACACGAACGGGATaGACAAGGCAGACTAAACAACAGAAGTGTCTGCTCCGGCAGGAA +
Preference number: 5 (lower is better)
Translates to: PTEGEVSNVQLTRTG*TRQTKQQKCLLRQE
Trigger: TTCCTGCCGGAGCAGACACTTCTGTTGTTTAGTCTGCCTTGTTCATCCCGTTCGTGTGAGCTGGACATTGGACACTTCCCCCTCTGTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378898.8
CDS-3UTR CAA 90 bp AGGACCTTCCTTCATCATGCATCATCCTTGCCCCACCAAGAAGATGGGTCAATGAATGGGCCCTGGGAGTaGTTGAGGGGCTGGATTAGC +
Preference number: 5 (lower is better)
Translates to: RTFLHHASSLPHQEDGSMNGPWE*LRGWIS
Trigger: GCTAATCCAGCCCCTCAACAACTCCCAGGGCCCATT...CATTGACCCATCTTCTTGGTGGGGCAAGGATGATGCATGATGAAGGAAGGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CAA 90 bp CAGACTCTCTTGGAACATTCTTCCCATGCGGGTGGTATGAACTGCGTGGCACTGGGGGTCAAGGACCATTaGCGCCTGATCAGATGTTCT +
Preference number: 5 (lower is better)
Translates to: QTLLEHSSHAGGMNCVALGVKDH*RLIRCS
Trigger: AGAACATCTGATCAGGCGCAAATGGTCCTTGACCCC...CAGTGCCACGCAGTTCATACCACCCGCATGGGAAGAATGTTCCAAGAGAGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CAA 90 bp AAGCAACCCCATCACCGCAATTACCGTTTCTTATGTCACAGCACCTTGAAGAGATGGCGCCCTGTGACCTaGTGCATGCACTGCACCACC +
Preference number: 5 (lower is better)
Translates to: KQPHHRNYRFLCHSTLKRWRPVT*CMHCTT
Trigger: GGTGGTGCAGTGCATGCACAAGGTCACAGGGCGCCA...TCTCTTCAAGGTGCTGTGACATAAGAAACGGTAATTGCGGTGATGGGGTTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CAA 90 bp CTTTGCCTTAGGAAGCAACCCCATCACCGCAATTACCGTTTCTTATGTCACAGCACAAGGCTGGTAGGCTaGCGGGTGGGTGGGTTTCAG +
Preference number: 5 (lower is better)
Translates to: LCLRKQPHHRNYRFLCHSTRLVG*RVGGFQ
Trigger: CTGAAACCCACCCACCCGCAAGCCTACCAGCCTTGT...GCTGTGACATAAGAAACGGTAATTGCGGTGATGGGGTTGCTTCCTAAGGCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CAA 90 bp AGTGACACGTGTGCAAGCACAAAGGTACAGTACTCGAGGGACAGTACAGGGTATTATGTAGTTGGATTCTaGTGGCAGCCGGGTGGGGGC +
Preference number: 5 (lower is better)
Translates to: SDTCASTKVQYSRDSTGYYVVGF*WQPGGG
Trigger: GCCCCCACCCGGCTGCCACAAGAATCCAACTACATA...ATACCCTGTACTGTCCCTCGAGTACTGTACCTTTGTGCTTGCACACGTGTCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CAA 90 bp TCCTCAGAGGTCCCAAATGTCGTCTTACCTTCAGATAAATGGCCACGGTCGGTAATCCTAGGCCTGGGCTaGTGTCCTCAGAGGTCCCAA +
Preference number: 5 (lower is better)
Translates to: SSEVPNVVLPSDKWPRSVILGLG*CPQRSQ
Trigger: TTGGGACCTCTGAGGACACAAGCCCAGGCCTAGGAT...TACCGACCGTGGCCATTTATCTGAAGGTAAGACGACATTTGGGACCTCTGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CAA 90 bp CTTAGGAAGCAACCCCATCACCGCAATTACCGTTTCTTATGTCACAGCACCTTGGCTTCCTTAGTGAGCTaGCCCGGCTCTGCTCCTTGG +
Preference number: 5 (lower is better)
Translates to: LRKQPHHRNYRFLCHSTLASLVS*PGSAPW
Trigger: CCAAGGAGCAGAGCCGGGCAAGCTCACTAAGGAAGC...CAAGGTGCTGTGACATAAGAAACGGTAATTGCGGTGATGGGGTTGCTTCCTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS GCA 90 bp CTACCAGGCACCACAGTCCAGCACACATTAGATGCTCCATGTTTCTaGAGAAGGTGGCATTCATGCCAAACAGGATCTGGCACTGCTCGT +
Preference number: 5 (lower is better)
Translates to: LPGTTVQHTLDAPCF*RRWHSCQTGSGTAR
Trigger: ACGAGCAGTGCCAGATCCTGTTTGGCATGAATGCCACCTTCTGCAGAAACATGGAGCATCTAATGTGTGCTGGACTGTGGTGCCTGGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268070.9
ENST00000378898.8
ENST00000568565.2
CDS-3UTR CAA 90 bp AGTGACACGTGTGCAAGCACAAAGGTACAGTACTCGAGGGACAGTACAGGGTATGTGATGGTGTTGGCGTaGATCCTGTCGTTGCAGACC +
Preference number: 5 (lower is better)
Translates to: SDTCASTKVQYSRDSTGYVMVLA*ILSLQT
Trigger: GGTCTGCAACGACAGGATCAACGCCAACACCATCAC...ATACCCTGTACTGTCCCTCGAGTACTGTACCTTTGTGCTTGCACACGTGTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CAA 90 bp CTTTGCCTTAGGAAGCAACCCCATCACCGCAATTACCGTTTCTTATGTCACAGCAGCTTTGAGCGACCCTaGGGACTGCGTGTCACGAGT +
Preference number: 5 (lower is better)
Translates to: LCLRKQPHHRNYRFLCHSSFERP*GLRVTS
Trigger: ACTCGTGACACGCAGTCCCAAGGGTCGCTCAAAGCT...GCTGTGACATAAGAAACGGTAATTGCGGTGATGGGGTTGCTTCCTAAGGCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CAA 90 bp CTGTCTCTGATCCCTCTGCACAGTAGCCCTTTGTCACTAGCGGTGTCACCTACCTCCACGTTGTTGTCCTaGTCTTCAAGTCATCCACCT +
Preference number: 5 (lower is better)
Translates to: LSLIPLHSSPLSLAVSPTSTLLS*SSSHPP
Trigger: AGGTGGATGACTTGAAGACAAGGACAACAACGTGGA...GGTAGGTGACACCGCTAGTGACAAAGGGCTACTGTGCAGAGGGATCAGAGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561355.2
CDS-3UTR CAA 90 bp GCCAAGCTGCAGAGGCCACAGGTAGACGCTCCACGTTGTTGTCCTTGTCTTCAATCTATCTCTCTGCCCTaGAACCTGGGTAGGTTTCTA +
Preference number: 5 (lower is better)
Translates to: AKLQRPQVDAPRCCPCLQSISLP*NLGRFL
Trigger: TAGAAACCTACCCAGGTTCAAGGGCAGAGAGATAGA...TTGAAGACAAGGACAACAACGTGGAGCGTCTACCTGTGGCCTCTGCAGCTTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561355.2
CDS GCA 90 bp CAGCACACATTAGATGCTCCATGTTTCTGCAGAAGGTGGCATTCATaGCAAACAGGATCTGGCACTGCTCGTTGGCACTGTAGTGCATGC +
Preference number: 5 (lower is better)
Translates to: QHTLDAPCFCRRWHS*QTGSGTARWHCSAC
Trigger: GCATGCACTACAGTGCCAACGAGCAGTGCCAGATCCTGTTTGGCATGAATGCCACCTTCTGCAGAAACATGGAGCATCTAATGTGTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268070.9
ENST00000378898.8
ENST00000568565.2
CDS CCA 90 bp ACCACAGTCCAGCACACATTAGATGCTCCATGTTTCTGCAGAAGGTaGCATTCATGCCAAACAGGATCTGGCACTGCTCGTTGGCACTGT +
Preference number: 5 (lower is better)
Translates to: TTVQHTLDAPCFCRR*HSCQTGSGTARWHC
Trigger: ACAGTGCCAACGAGCAGTGCCAGATCCTGTTTGGCATGAATGCCACCTTCTGCAGAAACATGGAGCATCTAATGTGTGCTGGACTGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268070.9
ENST00000378898.8
ENST00000568565.2
CDS CCA 90 bp CCAGCCGCTGTGGGTCCAGATGAACAAAGAGTCCTGCGGTTTTTCTaGTTCGCTTTGATTTTCCGCAGTGCGGTTTACAGGAACAGTGTA +
Preference number: 5 (lower is better)
Translates to: PAAVGPDEQRVLRFF*FALIFRSAVYRNSV
Trigger: TACACTGTTCCTGTAAACCGCACTGCGGAAAATCAAAGCGAACCAGAAAAACCGCAGGACTCTTTGTTCATCTGGACCCACAGCGGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268070.9
ENST00000568565.2
CDS-3UTR CAA 90 bp CATATTGTATACCATGTTCATGACGGTCAGGATGAACCTCTGGGCGGCCTCGGCTTTTCTGTTAGAACCTaGCAGAGCTGCTCAGGTCTC +
Preference number: 5 (lower is better)
Translates to: HIVYHVHDGQDEPLGGLGFSVRT*QSCSGL
Trigger: GAGACCTGAGCAGCTCTGCAAGGTTCTAACAGAAAA...GCCGAGGCCGCCCAGAGGTTCATCCTGACCGTCATGAACATGGTATACAATATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558960.1
CDS-3UTR CAA 90 bp TTCTCTGCCTCTAGGGTAGTAAAAACAAAAACACAGCTCGTAAGACAGGGTGGACCGGGAACCTGGTTATaGCCGAGGTATCGCGCTCCT +
Preference number: 5 (lower is better)
Translates to: FSASRVVKTKTQLVRQGGPGTWL*PRYRAP
Trigger: AGGAGCGCGATACCTCGGCAATAACCAGGTTCCCGG...TCCACCCTGTCTTACGAGCTGTGTTTTTGTTTTTACTACCCTAGAGGCAGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CAA 90 bp CTGACACCCTCGGTTCTTTCCACAGAGCACCCACGGAAGTTTCTCAACACTTCTGCCAAATTGAGACCATaGTCTTCGGCAAGCACACAC +
Preference number: 5 (lower is better)
Translates to: LTPSVLSTEHPRKFLNTSAKLRP*SSASTH
Trigger: GTGTGTGCTTGCCGAAGACAATGGTCTCAATTTGGC...AGAAGTGTTGAGAAACTTCCGTGGGTGCTCTGTGGAAAGAACCGAGGGTGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CAA 90 bp CAGACTTTAGGGGAACTAATGGGGGTATCTGACAATAACCCAATCAATCCTTTTTGCATGCCCGGCAGCTaGTGCGGGAGGCGTACTGTG +
Preference number: 5 (lower is better)
Translates to: QTLGELMGVSDNNPINPFCMPGS*CGRRTV
Trigger: CACAGTACGCCTCCCGCACAAGCTGCCGGGCATGCA...AAAAGGATTGATTGGGTTATTGTCAGATACCCCCATTAGTTCCCCTAAAGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CAA 90 bp CTTAGGAAGCAACCCCATCACCGCAATTACCGTTTCTTATGTCACAGCACCTTGCCGATTTTCTGGCACTaGCCGTGCACGCAGAGATCA +
Preference number: 5 (lower is better)
Translates to: LRKQPHHRNYRFLCHSTLPIFWH*PCTQRS
Trigger: TGATCTCTGCGTGCACGGCAAGTGCCAGAAAATCGG...CAAGGTGCTGTGACATAAGAAACGGTAATTGCGGTGATGGGGTTGCTTCCTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CAA 90 bp CTTAGGAAGCAACCCCATCACCGCAATTACCGTTTCTTATGTCACAGCACCTTGAAGTGCAGCGGTAGTTaGGTTGGTCCCTTGGCAGAG +
Preference number: 5 (lower is better)
Translates to: LRKQPHHRNYRFLCHSTLKCSGS*VGPLAE
Trigger: CTCTGCCAAGGGACCAACCAAACTACCGCTGCACTT...CAAGGTGCTGTGACATAAGAAACGGTAATTGCGGTGATGGGGTTGCTTCCTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CAA 90 bp TTCTCTGCCTCTAGGGTAGTAAAAACAAAAACACAGCTCGTAAGACAGGGTGGACTCTGGGCGGCTTGCTaGAGGGCAGTCACTGTCGTT +
Preference number: 5 (lower is better)
Translates to: FSASRVVKTKTQLVRQGGLWAAC*RAVTVV
Trigger: AACGACAGTGACTGCCCTCAAGCAAGCCGCCCAGAG...TCCACCCTGTCTTACGAGCTGTGTTTTTGTTTTTACTACCCTAGAGGCAGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CAA 90 bp TCCTCAGAGGTCCCAAATGTCGTCTTACCTTCAGATAAATGGCCACGGTCGGTACATCATGCATCATCCTaGCCCCACCAAGAAGATGGG +
Preference number: 5 (lower is better)
Translates to: SSEVPNVVLPSDKWPRSVHHASS*PHQEDG
Trigger: CCCATCTTCTTGGTGGGGCAAGGATGATGCATGATG...TACCGACCGTGGCCATTTATCTGAAGGTAAGACGACATTTGGGACCTCTGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CAA 90 bp AAGCAACCCCATCACCGCAATTACCGTTTCTTATGTCACAGCACCTTGAAGAGAAAGAGGCCACTCTGCTaGTCTGCTGCCAGGCGTAAG +
Preference number: 5 (lower is better)
Translates to: KQPHHRNYRFLCHSTLKRKRPLC*SAARRK
Trigger: CTTACGCCTGGCAGCAGACAAGCAGAGTGGCCTCTT...TCTCTTCAAGGTGCTGTGACATAAGAAACGGTAATTGCGGTGATGGGGTTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CAA 90 bp AGGACCTTCCTTCATCATGCATCATCCTTGCCCCACCAAGAAGATGGGTCAATGGAAATGCCCACCAAGTaGGTGAGCAAAACAGGCCTC +
Preference number: 5 (lower is better)
Translates to: RTFLHHASSLPHQEDGSMEMPTK*VSKTGL
Trigger: GAGGCCTGTTTTGCTCACCAACTTGGTGGGCATTTC...CATTGACCCATCTTCTTGGTGGGGCAAGGATGATGCATGATGAAGGAAGGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS GCA 90 bp GATGTGTCTCCTTCTACCAGGCACCACAGTCCAGCACACATTAGATaGTCCATGTTTCTGCAGAAGGTGGCATTCATGCCAAACAGGATC +
Preference number: 5 (lower is better)
Translates to: DVSPSTRHHSPAHIR*SMFLQKVAFMPNRI
Trigger: GATCCTGTTTGGCATGAATGCCACCTTCTGCAGAAACATGGAGCATCTAATGTGTGCTGGACTGTGGTGCCTGGTAGAAGGAGACACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268070.9
ENST00000378898.8
ENST00000568565.2
CDS-3UTR CAA 90 bp AGAGCTCTGCAGATGCAGACTTTAGGGGAACTAATGGGGGTATCTGACAATAACGGGTCCAGCTTGGTCTaGCAGGATGTGTCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: RALQMQTLGELMGVSDNNGSSLV*QDVSPS
Trigger: AGAAGGAGACACATCCTGCAAGACCAAGCTGGACCC...GTTATTGTCAGATACCCCCATTAGTTCCCCTAAAGTCTGCATCTGCAGAGCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CAA 90 bp GCATCTCTAAGGTACAAAGCTTTAGGAAGTGCAGGCCAGAGTGGATGTTCCCGGAGAGTTGTGGTCTTGTaGACAATCCGTGTACACGAG +
Preference number: 5 (lower is better)
Translates to: ASLRYKALGSAGQSGCSRRVVVL*TIRVHE
Trigger: CTCGTGTACACGGATTGTCAACAAGACCACAACTCT...CCGGGAACATCCACTCTGGCCTGCACTTCCTAAAGCTTTGTACCTTAGAGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CAA 90 bp CTGACACCCTCGGTTCTTTCCACAGAGCACCCACGGAAGTTTCTCAACACTTCTTTTTTCTGGTTCGCTTaGATTTTCCGCAGTGCGGTT +
Preference number: 5 (lower is better)
Translates to: LTPSVLSTEHPRKFLNTSFFWFA*IFRSAV
Trigger: AACCGCACTGCGGAAAATCAAAGCGAACCAGAAAAA...AGAAGTGTTGAGAAACTTCCGTGGGTGCTCTGTGGAAAGAACCGAGGGTGTCAG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CAA 90 bp TCCTCAGAGGTCCCAAATGTCGTCTTACCTTCAGATAAATGGCCACGGTCGGTAATGGTAAAGGCCAAATaGAGACCATTGTCTTCGGCA +
Preference number: 5 (lower is better)
Translates to: SSEVPNVVLPSDKWPRSVMVKAK*RPLSSA
Trigger: TGCCGAAGACAATGGTCTCAATTTGGCCTTTACCAT...TACCGACCGTGGCCATTTATCTGAAGGTAAGACGACATTTGGGACCTCTGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS GCA 90 bp TCACACGAACGGGATGAACAAGGCAGACTAAACAACAGAAGTGTCTaGTCCGGCAGGAATTTAAAAGCTGAAGTCTTAGAGGTACAACCG +
Preference number: 5 (lower is better)
Translates to: SHERDEQGRLNNRSV*SGRNLKAEVLEVQP
Trigger: CGGTTGTACCTCTAAGACTTCAGCTTTTAAATTCCTGCCGGAGCAGACACTTCTGTTGTTTAGTCTGCCTTGTTCATCCCGTTCGTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378898.8
CDS-3UTR CAA 90 bp TCCATGGTGTCGCCGGCTTTCAGAATAAAGCCTTTTCTAGCATGTCTCGTTTTGTCACATAGCGAACAGTaGTGCCTGCAATCTGGAACT +
Preference number: 5 (lower is better)
Translates to: SMVSPAFRIKPFLACLVLSHSEQ*CLQSGT
Trigger: AGTTCCAGATTGCAGGCACAACTGTTCGCTATGTGA...CAAAACGAGACATGCTAGAAAAGGCTTTATTCTGAAAGCCGGCGACACCATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CAA 90 bp AGAGCTCTGCAGATGCAGACTTTAGGGGAACTAATGGGGGTATCTGACAATAACACCAGAGTTGTGGTCTaGTTGACAATCCGTGTACAC +
Preference number: 5 (lower is better)
Translates to: RALQMQTLGELMGVSDNNTRVVV*LTIRVH
Trigger: GTGTACACGGATTGTCAACAAGACCACAACTCTGGT...GTTATTGTCAGATACCCCCATTAGTTCCCCTAAAGTCTGCATCTGCAGAGCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CAA 90 bp CAGACTTTAGGGGAACTAATGGGGGTATCTGACAATAACCCAATCAATCCTTTTATCTTCCAGTCACTGTaGATGGACCCCTTACCCGAG +
Preference number: 5 (lower is better)
Translates to: QTLGELMGVSDNNPINPFIFQSL*MDPLPE
Trigger: CTCGGGTAAGGGGTCCATCAACAGTGACTGGAAGAT...AAAAGGATTGATTGGGTTATTGTCAGATACCCCCATTAGTTCCCCTAAAGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CAA 90 bp TCCTCAGAGGTCCCAAATGTCGTCTTACCTTCAGATAAATGGCCACGGTCGGTAGACAAGCTTGGTCACTaGAATGTTAATTTTAATCCC +
Preference number: 5 (lower is better)
Translates to: SSEVPNVVLPSDKWPRSVDKLGH*NVNFNP
Trigger: GGGATTAAAATTAACATTCAAGTGACCAAGCTTGTC...TACCGACCGTGGCCATTTATCTGAAGGTAAGACGACATTTGGGACCTCTGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CAA 90 bp TCCATGGTGTCGCCGGCTTTCAGAATAAAGCCTTTTCTAGCATGTCTCGTTTTGGTGCTGACTTTTGACTaGAGGAAGTTTTCAAGGTCA +
Preference number: 5 (lower is better)
Translates to: SMVSPAFRIKPFLACLVLVLTFD*RKFSRS
Trigger: TGACCTTGAAAACTTCCTCAAGTCAAAAGTCAGCAC...CAAAACGAGACATGCTAGAAAAGGCTTTATTCTGAAAGCCGGCGACACCATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CAA 90 bp CAGACTTTAGGGGAACTAATGGGGGTATCTGACAATAACCCAATCAATCCTTTTAATGATGTCTCTCTCTaGACGGTTGTCTGCCAGAGG +
Preference number: 5 (lower is better)
Translates to: QTLGELMGVSDNNPINPFNDVSL*TVVCQR
Trigger: CCTCTGGCAGACAACCGTCAAGAGAGAGACATCATT...AAAAGGATTGATTGGGTTATTGTCAGATACCCCCATTAGTTCCCCTAAAGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS-3UTR CAA 90 bp CAGACTTTAGGGGAACTAATGGGGGTATCTGACAATAACCCAATCAATCCTTTTTTTTCTGTTAGAACCTaGCAGAGCTGCTCAGGTCTC +
Preference number: 5 (lower is better)
Translates to: QTLGELMGVSDNNPINPFFSVRT*QSCSGL
Trigger: GAGACCTGAGCAGCTCTGCAAGGTTCTAACAGAAAA...AAAAGGATTGATTGGGTTATTGTCAGATACCCCCATTAGTTCCCCTAAAGTCTG
43% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS GCA 72 bp CCACCTCCACGTCGGCCGCCGCGTCGCCGACAGCTGTaGCCGGGTCCAGTCCCCAAACCAGCAGCAGCAGCA +
Preference number: 6 (lower is better)
Translates to: PPPRRPPRRRQL*PGPVPKPAAAA
Trigger: TGCTGCTGCTGCTGGTTTGGGGACTGGACCCGGGCACAGCTGTCGGCGACGCGGCGGCCGACGTGGAGGTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268070.9
ENST00000568565.2
CDS CCA 72 bp CCCACGGGCTCCAGTCTCCGTCCACATGCTCCGGGATaGGCGTCTTGCTCACGCACTCCCCCGCGCGGCACC +
Preference number: 6 (lower is better)
Translates to: PTGSSLRPHAPG*ASCSRTPPRGT
Trigger: GGTGCCGCGCGGGGGAGTGCGTGAGCAAGACGCCCATCCCGGAGCATGTGGACGGAGACTGGAGCCCGTGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268070.9
ENST00000378898.8
ENST00000568565.2
CDS CAA 72 bp AGGGCGGGGCACTCGCTGCCGTGGCGCCCTGTGACCTaGTGCATGCACTGCACCACCCGGGACTGCAGGCCC +
Preference number: 6 (lower is better)
Translates to: RAGHSLPWRPVT*CMHCTTRDCRP
Trigger: GGGCCTGCAGTCCCGGGTGGTGCAGTGCATGCACAAGGTCACAGGGCGCCACGGCAGCGAGTGCCCCGCCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268070.9
ENST00000557896.1
ENST00000568565.2
CDS CAA 90 bp GGCTTCGAGAGGGCGGGGCACTCGCTGCCGTGGCGCCCTGTGACCTaGTGCATGCACTGCACCACCCGGGACTGCAGGCCCTTCCCGCAG +
Preference number: 6 (lower is better)
Translates to: GFERAGHSLPWRPVT*CMHCTTRDCRPFPQ
Trigger: CTGCGGGAAGGGCCTGCAGTCCCGGGTGGTGCAGTGCATGCACAAGGTCACAGGGCGCCACGGCAGCGAGTGCCCCGCCCTCTCGAAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268070.9
ENST00000557896.1
ENST00000568565.2
CDS TCA 72 bp AAGCCTCGGGACAGGAAGCGCAGGTCGCGGCGCAGCTaGAGGTACAGGTCGCGCCCGAAGGCCGGCAGGTGC +
Preference number: 6 (lower is better)
Translates to: KPRDRKRRSRRS*RYRSRPKAGRC
Trigger: GCACCTGCCGGCCTTCGGGCGCGACCTGTACCTTCAGCTGCGCCGCGACCTGCGCTTCCTGTCCCGAGGCTT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268070.9
ENST00000568565.2
CDS GCA 72 bp GCGGGGCACTCGCTGCCGTGGCGCCCTGTGACCTTGTaGATGCACTGCACCACCCGGGACTGCAGGCCCTTC +
Preference number: 6 (lower is better)
Translates to: AGHSLPWRPVTL*MHCTTRDCRPF
Trigger: GAAGGGCCTGCAGTCCCGGGTGGTGCAGTGCATGCACAAGGTCACAGGGCGCCACGGCAGCGAGTGCCCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268070.9
ENST00000557896.1
ENST00000568565.2
CDS CCA 72 bp GGGGCAGGCTTCGAGAGGGCGGGGCACTCGCTGCCGTaGCGCCCTGTGACCTTGTGCATGCACTGCACCACC +
Preference number: 6 (lower is better)
Translates to: GAGFERAGHSLP*RPVTLCMHCTT
Trigger: GGTGGTGCAGTGCATGCACAAGGTCACAGGGCGCCACGGCAGCGAGTGCCCCGCCCTCTCGAAGCCTGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268070.9
ENST00000557896.1
ENST00000568565.2
CDS GCA 72 bp CTTGCTCACGCACTCCCCCGCGCGGCACCACTTGTCTaGCCCACACTCGGTGCCATCCAGGGGAGGGTCCAG +
Preference number: 6 (lower is better)
Translates to: LAHALPRAAPLV*PTLGAIQGRVQ
Trigger: CTGGACCCTCCCCTGGATGGCACCGAGTGTGGGGCAGACAAGTGGTGCCGCGCGGGGGAGTGCGTGAGCAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268070.9
ENST00000378898.8
ENST00000568565.2
CDS GCA 72 bp TCGCTGCCGTGGCGCCCTGTGACCTTGTGCATGCACTaGACCACCCGGGACTGCAGGCCCTTCCCGCAGGTC +
Preference number: 6 (lower is better)
Translates to: SLPWRPVTLCMH*TTRDCRPFPQV
Trigger: GACCTGCGGGAAGGGCCTGCAGTCCCGGGTGGTGCAGTGCATGCACAAGGTCACAGGGCGCCACGGCAGCGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268070.9
ENST00000557896.1
ENST00000568565.2
CDS CCA 72 bp GACCACTCAGACGCCTCCCAGATGGACAGGCAGTCCTaGCCTTCACAGCTCTGCACTGCCGCCGGCCGGGGG +
Preference number: 6 (lower is better)
Translates to: DHSDASQMDRQS*PSQLCTAAGRG
Trigger: CCCCCGGCCGGCGGCAGTGCAGAGCTGTGAAGGCCAGGACTGCCTGTCCATCTGGGAGGCGTCTGAGTGGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268070.9
ENST00000568565.2
CDS CAA 72 bp GGGCCTGCCACCCACCGTGACTGGCAGGGGTGCAAGTaGCACCTTCGGACCTGGGGCTCTGGGCGGCTTGCT +
Preference number: 6 (lower is better)
Translates to: GPATHRDWQGCK*HLRTWGSGRLA
Trigger: AGCAAGCCGCCCAGAGCCCCAGGTCCGAAGGTGCAACTTGCACCCCTGCCAGTCACGGTGGGTGGCAGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268070.9
ENST00000568565.2
CDS GCA 72 bp GGCCTGCCACCCACCGTGACTGGCAGGGGTGCAAGTTaGACCTTCGGACCTGGGGCTCTGGGCGGCTTGCTT +
Preference number: 6 (lower is better)
Translates to: GLPPTVTGRGAS*TFGPGALGGLL
Trigger: AAGCAAGCCGCCCAGAGCCCCAGGTCCGAAGGTGCAACTTGCACCCCTGCCAGTCACGGTGGGTGGCAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268070.9
ENST00000568565.2
CDS CCA 72 bp GGCAGGGCAGGTTCTCGCAGACCGCATGTTCTACACTaGCACCCGGGCAGTGTGTGCCTCCAGGCCCAGGGG +
Preference number: 6 (lower is better)
Translates to: GRAGSRRPHVLH*HPGSVCLQAQG
Trigger: CCCCTGGGCCTGGAGGCACACACTGCCCGGGTGCCAGTGTAGAACATGCGGTCTGCGAGAACCTGCCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268070.9
ENST00000378898.8
ENST00000568565.2
CDS GCA 72 bp TCCAGTCTCCGTCCACATGCTCCGGGATGGGCGTCTTaGTCACGCACTCCCCCGCGCGGCACCACTTGTCTG +
Preference number: 6 (lower is better)
Translates to: SSLRPHAPGWAS*SRTPPRGTTCL
Trigger: CAGACAAGTGGTGCCGCGCGGGGGAGTGCGTGAGCAAGACGCCCATCCCGGAGCATGTGGACGGAGACTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268070.9
ENST00000378898.8
ENST00000568565.2
CDS CCA 72 bp AGGGGCCGCGTAGCGACGTGTGTGCCGTTCTGCAGCTaGTACACGCAGGTCACCTCCCGGTGCTGGAAGCCT +
Preference number: 6 (lower is better)
Translates to: RGRVATCVPFCS*YTQVTSRCWKP
Trigger: AGGCTTCCAGCACCGGGAGGTGACCTGCGTGTACCAGCTGCAGAACGGCACACACGTCGCTACGCGGCCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268070.9
ENST00000568565.2
CDS CAA 72 bp CTCCAGTCTCCGTCCACATGCTCCGGGATGGGCGTCTaGCTCACGCACTCCCCCGCGCGGCACCACTTGTCT +
Preference number: 6 (lower is better)
Translates to: LQSPSTCSGMGV*LTHSPARHHLS
Trigger: AGACAAGTGGTGCCGCGCGGGGGAGTGCGTGAGCAAGACGCCCATCCCGGAGCATGTGGACGGAGACTGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268070.9
ENST00000378898.8
ENST00000568565.2
CDS GCA 72 bp CGCCCTTCACCAAGTGGCAGGTCTTGCCGTCCCCGCTaGAGACCCCGCATCTGTCCTCTTTGGCTGCAGACC +
Preference number: 6 (lower is better)
Translates to: RPSPSGRSCRPR*RPRICPLWLQT
Trigger: GGTCTGCAGCCAAAGAGGACAGATGCGGGGTCTGCAGCGGGGACGGCAAGACCTGCCACTTGGTGAAGGGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268070.9
ENST00000378898.8
ENST00000568565.2
CDS GCA 72 bp CCGTTCTGCAGCTGGTACACGCAGGTCACCTCCCGGTaGTGGAAGCCTTTCTCACAGGTCGCCGAGCAGGGG +
Preference number: 6 (lower is better)
Translates to: PFCSWYTQVTSR*WKPFSQVAEQG
Trigger: CCCCTGCTCGGCGACCTGTGAGAAAGGCTTCCAGCACCGGGAGGTGACCTGCGTGTACCAGCTGCAGAACGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268070.9
ENST00000568565.2
CDS GCA 72 bp CCTGTGACCTTGTGCATGCACTGCACCACCCGGGACTaGAGGCCCTTCCCGCAGGTCGACGAGCACGTAGAC +
Preference number: 6 (lower is better)
Translates to: PVTLCMHCTTRD*RPFPQVDEHVD
Trigger: GTCTACGTGCTCGTCGACCTGCGGGAAGGGCCTGCAGTCCCGGGTGGTGCAGTGCATGCACAAGGTCACAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268070.9
ENST00000568565.2
CDS GCA 72 bp CCTGTGACCTTGTGCATGCACTGCACCACCCGGGACTaGAGGCCCTTCCCGCAGGTCGACGAGCACTGCAGA +
Preference number: 6 (lower is better)
Translates to: PVTLCMHCTTRD*RPFPQVDEHCR
Trigger: TCTGCAGTGCTCGTCGACCTGCGGGAAGGGCCTGCAGTCCCGGGTGGTGCAGTGCATGCACAAGGTCACAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557896.1
CDS CAA 72 bp GCGTGGCTGAAGTCGCCCTTCACCAAGTGGCAGGTCTaGCCGTCCCCGCTGCAGACCCCGCATCTGTCCTCT +
Preference number: 6 (lower is better)
Translates to: AWLKSPFTKWQV*PSPLQTPHLSS
Trigger: AGAGGACAGATGCGGGGTCTGCAGCGGGGACGGCAAGACCTGCCACTTGGTGAAGGGCGACTTCAGCCACGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268070.9
ENST00000378898.8
ENST00000568565.2
CDS TCA 72 bp GGCTCTCGGCCTCGTGGATGCGTCGCATTTCCCTTGTaGGTTGGTGCACGCCACGGTCCGTTTCCACACCCC +
Preference number: 6 (lower is better)
Translates to: GSRPRGCVAFPL*VGARHGPFPHP
Trigger: GGGGTGTGGAAACGGACCGTGGCGTGCACCAACTCACAAGGGAAATGCGACGCATCCACGAGGCCGAGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268070.9
ENST00000568565.2
CDS GCA 72 bp TGCATGCCCGGCAGCTTGTGCGGGAGGCGTACTGTGTaGTGGCTTCTGGGGTCCGTGACTAGCAAGCAGGTG +
Preference number: 6 (lower is better)
Translates to: CMPGSLCGRRTV*WLLGSVTSKQV
Trigger: CACCTGCTTGCTAGTCACGGACCCCAGAAGCCAGCACACAGTACGCCTCCCGCACAAGCTGCCGGGCATGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268070.9
ENST00000378898.8
ENST00000568565.2
CDS CAA 90 bp GCGGGTGGGTGGGTTTCAGACCTGAGTCTGAGCTTTGAGCGACCCTaGGGACTGCGTGTCACGAGTTCGGCGGTGGCTGGCGCATCTTGT +
Preference number: 6 (lower is better)
Translates to: AGGWVSDLSLSFERP*GLRVTSSAVAGASC
Trigger: ACAAGATGCGCCAGCCACCGCCGAACTCGTGACACGCAGTCCCAAGGGTCGCTCAAAGCTCAGACTCAGGTCTGAAACCCACCCACCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268070.9
ENST00000557896.1
CDS TCA 72 bp CGGCAGCTTCGATATAACCTGTCCCCCGGGCGTGGCTaGAGTCGCCCTTCACCAAGTGGCAGGTCTTGCCGT +
Preference number: 6 (lower is better)
Translates to: RQLRYNLSPGRG*SRPSPSGRSCR
Trigger: ACGGCAAGACCTGCCACTTGGTGAAGGGCGACTTCAGCCACGCCCGGGGGACAGGTTATATCGAAGCTGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378898.8
ENST00000568565.2
CDS TCA 72 bp TTGAGGGGCTGGATTAGCACCTGCTCCTGCCCAAGCTaGATGAGGCCAACCTGTGCCCGGGTCCAGTCCCCA +
Preference number: 6 (lower is better)
Translates to: LRGWISTCSCPS*MRPTCARVQSP
Trigger: TGGGGACTGGACCCGGGCACAGGTTGGCCTCATTCAGCTTGGGCAGGAGCAGGTGCTAATCCAGCCCCTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558960.1
CDS GCA 72 bp GGGATCCTGGTGGTGCAGCTTCGGGCCAGCTGTGTCTaGTATGGTGTCTCCCAGGCACTCTCACCCAGAGCA +
Preference number: 6 (lower is better)
Translates to: GILVVQLRASCV*YGVSQALSPRA
Trigger: TGCTCTGGGTGAGAGTGCCTGGGAGACACCATAGCAGACACAGCTGGCCCGAAGCTGCACCACCAGGATCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560486.2
CDS GCA 72 bp CTGGAGGGGAAGGTCTGGCCAGAGGGATCCTGGTGGTaGAGCTTCGGGCCAGCTGTGTCTGCTATGGTGTCT +
Preference number: 6 (lower is better)
Translates to: LEGKVWPEGSWW*SFGPAVSAMVS
Trigger: AGACACCATAGCAGACACAGCTGGCCCGAAGCTGCACCACCAGGATCCCTCTGGCCAGACCTTCCCCTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560486.2
CDS CCA 72 bp CCCTTACCCGAGTCTTTGAGAGCTGTCCCCCGGGCGTaGCTGAAGTCGCCCTTCACCAAGTGGCAGGTCTTG +
Preference number: 6 (lower is better)
Translates to: PLPESLRAVPRA*LKSPFTKWQVL
Trigger: CAAGACCTGCCACTTGGTGAAGGGCGACTTCAGCCACGCCCGGGGGACAGCTCTCAAAGACTCGGGTAAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268070.9
CDS CCA 72 bp ATGCTGGAGGGGAAGGTCTGGCCAGAGGGATCCTGGTaGTGCAGCTTCGGGCCAGCTGTGTCTGCTATGGTG +
Preference number: 6 (lower is better)
Translates to: MLEGKVWPEGSW*CSFGPAVSAMV
Trigger: CACCATAGCAGACACAGCTGGCCCGAAGCTGCACCACCAGGATCCCTCTGGCCAGACCTTCCCCTCCAGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560486.2
CDS CAA 72 bp GCCCCACACTCGGTGCCATCCAGGGGAGGGTCCAGCTaGGTCTTGCAGGATGTGTCTCCTTCTACCAGGCAC +
Preference number: 6 (lower is better)
Translates to: APHSVPSRGGSS*VLQDVSPSTRH
Trigger: GTGCCTGGTAGAAGGAGACACATCCTGCAAGACCAAGCTGGACCCTCCCCTGGATGGCACCGAGTGTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268070.9
ENST00000378898.8
ENST00000568565.2
CDS CAA 72 bp TTGCCGTCCCCGCTGCAGACCCCGCATCTGTCCTCTTaGGCTGCAGACCCGATGATGCCGTCACAGCCGATT +
Preference number: 6 (lower is better)
Translates to: LPSPLQTPHLSS*AADPMMPSQPI
Trigger: AATCGGCTGTGACGGCATCATCGGGTCTGCAGCCAAAGAGGACAGATGCGGGGTCTGCAGCGGGGACGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268070.9
ENST00000378898.8
ENST00000568565.2
CDS CAA 90 bp GGCAGGGGTGCAAGTTGCACCTTCGGACCTGGGGCTCTGGGCGGCTaGCTTGAGGGCAGTCACTGTCGTTCACCAGAGTTGTGGTCTTGT +
Preference number: 6 (lower is better)
Translates to: GRGASCTFGPGALGG*LEGSHCRSPELWSC
Trigger: ACAAGACCACAACTCTGGTGAACGACAGTGACTGCCCTCAAGCAAGCCGCCCAGAGCCCCAGGTCCGAAGGTGCAACTTGCACCCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268070.9
ENST00000568565.2
CDS CAA 90 bp TCCTCGGCTCTCGGCCTCGTGGATGCGTCGCATTTCCCTTGTGAGTaGGTGCACGCCACGGTCCGTTTCCACACCCCTTTACCACAGCTG +
Preference number: 6 (lower is better)
Translates to: SSALGLVDASHFPCE*VHATVRFHTPLPQL
Trigger: CAGCTGTGGTAAAGGGGTGTGGAAACGGACCGTGGCGTGCACCAACTCACAAGGGAAATGCGACGCATCCACGAGGCCGAGAGCCGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268070.9
ENST00000568565.2
CDS TCA 72 bp TGCGGGTGGGTGGGTTTCAGACCTGAGTCTGAGCTTTaGGCGACCCTTGGGACTGCGTGTCACGAGTTCGGC +
Preference number: 6 (lower is better)
Translates to: CGWVGFRPESEL*ATLGTACHEFG
Trigger: GCCGAACTCGTGACACGCAGTCCCAAGGGTCGCTCAAAGCTCAGACTCAGGTCTGAAACCCACCCACCCGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268070.9
ENST00000557896.1
CDS GCA 72 bp ACAGGATCTGGCACTGCTCGTTGGCACTGTAGTGCATaGCCGGCAGCTTGTGCGGGAGGCGTACTGTGTGCT +
Preference number: 6 (lower is better)
Translates to: TGSGTARWHCSA*PAACAGGVLCA
Trigger: AGCACACAGTACGCCTCCCGCACAAGCTGCCGGGCATGCACTACAGTGCCAACGAGCAGTGCCAGATCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268070.9
ENST00000378898.8
ENST00000568565.2
CDS GCA 72 bp CCGCTTCTGGCTCAGCAGCTCCTGCTAGACATGTCATaGTCACGTCCTCCATGGCAGCCACCTAGCCACCTG +
Preference number: 6 (lower is better)
Translates to: PLLAQQLLLDMS*SRPPWQPPSHL
Trigger: CAGGTGGCTAGGTGGCTGCCATGGAGGACGTGAGCATGACATGTCTAGCAGGAGCTGCTGAGCCAGAAGCGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560486.2
CDS CAA 72 bp GCAAGTTGCACCTTCGGACCTGGGGCTCTGGGCGGCTaGCTTGAGGGCAGTCACTGTCGTTCACCAGAGTTG +
Preference number: 6 (lower is better)
Translates to: ASCTFGPGALGG*LEGSHCRSPEL
Trigger: CAACTCTGGTGAACGACAGTGACTGCCCTCAAGCAAGCCGCCCAGAGCCCCAGGTCCGAAGGTGCAACTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268070.9
ENST00000568565.2
CDS CAA 72 bp TGGGTTTCAGACCTGAGTCTGAGCTTTGAGCGACCCTaGGGACTGCGTGTCACGAGTTCGGCGGTGGCTGGC +
Preference number: 6 (lower is better)
Translates to: WVSDLSLSFERP*GLRVTSSAVAG
Trigger: GCCAGCCACCGCCGAACTCGTGACACGCAGTCCCAAGGGTCGCTCAAAGCTCAGACTCAGGTCTGAAACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268070.9
ENST00000557896.1
CDS CAA 90 bp CACTTGTCTGCCCCACACTCGGTGCCATCCAGGGGAGGGTCCAGCTaGGTCTTGCAGGATGTGTCTCCTTCTACCAGGCACCACAGTCCA +
Preference number: 6 (lower is better)
Translates to: HLSAPHSVPSRGGSS*VLQDVSPSTRHHSP
Trigger: TGGACTGTGGTGCCTGGTAGAAGGAGACACATCCTGCAAGACCAAGCTGGACCCTCCCCTGGATGGCACCGAGTGTGGGGCAGACAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268070.9
ENST00000378898.8
ENST00000568565.2
CDS CAA 90 bp GGGGTGCAAGTTGCACCTTCGGACCTGGGGCTCTGGGCGGCTTGCTaGAGGGCAGTCACTGTCGTTCACCAGAGTTGTGGTCTTGTTGAC +
Preference number: 6 (lower is better)
Translates to: GVQVAPSDLGLWAAC*RAVTVVHQSCGLVD
Trigger: GTCAACAAGACCACAACTCTGGTGAACGACAGTGACTGCCCTCAAGCAAGCCGCCCAGAGCCCCAGGTCCGAAGGTGCAACTTGCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268070.9
ENST00000568565.2
CDS GCA 72 bp CAAGTTGCACCTTCGGACCTGGGGCTCTGGGCGGCTTaGTTGAGGGCAGTCACTGTCGTTCACCAGAGTTGT +
Preference number: 6 (lower is better)
Translates to: QVAPSDLGLWAA*LRAVTVVHQSC
Trigger: ACAACTCTGGTGAACGACAGTGACTGCCCTCAAGCAAGCCGCCCAGAGCCCCAGGTCCGAAGGTGCAACTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268070.9
ENST00000568565.2
CDS GCA 72 bp GCCTCGTGGATGCGTCGCATTTCCCTTGTGAGTTGGTaGACGCCACGGTCCGTTTCCACACCCCTTTACCAC +
Preference number: 6 (lower is better)
Translates to: ASWMRRISLVSW*TPRSVSTPLYH
Trigger: GTGGTAAAGGGGTGTGGAAACGGACCGTGGCGTGCACCAACTCACAAGGGAAATGCGACGCATCCACGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268070.9
ENST00000568565.2
CDS CCA 72 bp GGGTTCCGGCCTTTCACCCACTCTCCTGACATGATGTaGGACCTGCCAGCGCAAGATGAGTGGTCATCGTCG +
Preference number: 6 (lower is better)
Translates to: GFRPFTHSPDMM*DLPAQDEWSSS
Trigger: CGACGATGACCACTCATCTTGCGCTGGCAGGTCCCACATCATGTCAGGAGAGTGGGTGAAAGGCCGGAACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268070.9
ENST00000378898.8
ENST00000568565.2
CDS CCA 72 bp CCGCCGCACTGCACACTGCACCCTTCCCAGCCGCTGTaGGTCCAGATGAACAAAGAGTCCTGCGGTTTTTCT +
Preference number: 6 (lower is better)
Translates to: PPHCTLHPSQPL*VQMNKESCGFS
Trigger: AGAAAAACCGCAGGACTCTTTGTTCATCTGGACCCACAGCGGCTGGGAAGGGTGCAGTGTGCAGTGCGGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268070.9
ENST00000568565.2
CDS CCA 72 bp TCGGCCTCGTGGATGCGTCGCATTTCCCTTGTGAGTTaGTGCACGCCACGGTCCGTTTCCACACCCCTTTAC +
Preference number: 6 (lower is better)
Translates to: SASWMRRISLVS*CTPRSVSTPLY
Trigger: GTAAAGGGGTGTGGAAACGGACCGTGGCGTGCACCAACTCACAAGGGAAATGCGACGCATCCACGAGGCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268070.9
ENST00000568565.2
CDS CCA 72 bp AGCGACCCTTGGGACTGCGTGTCACGAGTTCGGCGGTaGCTGGCGCATCTTGTTTGCATAGAAGTCCCTGCA +
Preference number: 6 (lower is better)
Translates to: SDPWDCVSRVRR*LAHLVCIEVPA
Trigger: TGCAGGGACTTCTATGCAAACAAGATGCGCCAGCCACCGCCGAACTCGTGACACGCAGTCCCAAGGGTCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268070.9
ENST00000557896.1
CDS CCA 72 bp ATTATGCTGGAGGGGAAGGTCTGGCCAGAGGGATCCTaGTGGTGCAGCTTCGGGCCAGCTGTGTCTGCTATG +
Preference number: 6 (lower is better)
Translates to: IMLEGKVWPEGS*WCSFGPAVSAM
Trigger: CATAGCAGACACAGCTGGCCCGAAGCTGCACCACCAGGATCCCTCTGGCCAGACCTTCCCCTCCAGCATAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560486.2
CDS CCA 72 bp CCTGCAAGCTACCCAGCAGCCATGGCCTCACGAGCGTaGGAAGCCTGGGAGCGTAACATCAAGTTCCATGGA +
Preference number: 6 (lower is better)
Translates to: PASYPAAMASRA*EAWERNIKFHG
Trigger: TCCATGGAACTTGATGTTACGCTCCCAGGCTTCCCACGCTCGTGAGGCCATGGCTGCTGGGTAGCTTGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560486.2
CDS CAA 72 bp CACTCGGTGCCATCCAGGGGAGGGTCCAGCTTGGTCTaGCAGGATGTGTCTCCTTCTACCAGGCACCACAGT +
Preference number: 6 (lower is better)
Translates to: HSVPSRGGSSLV*QDVSPSTRHHS
Trigger: ACTGTGGTGCCTGGTAGAAGGAGACACATCCTGCAAGACCAAGCTGGACCCTCCCCTGGATGGCACCGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268070.9
ENST00000378898.8
ENST00000568565.2
CDS CAA 72 bp CTCGGCCTCGTGGATGCGTCGCATTTCCCTTGTGAGTaGGTGCACGCCACGGTCCGTTTCCACACCCCTTTA +
Preference number: 6 (lower is better)
Translates to: LGLVDASHFPCE*VHATVRFHTPL
Trigger: TAAAGGGGTGTGGAAACGGACCGTGGCGTGCACCAACTCACAAGGGAAATGCGACGCATCCACGAGGCCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268070.9
ENST00000568565.2
CDS CAA 90 bp CGAGCGTGGGAAGCCTGGGAGCGTAACATCAAGTTCCATGGATACTaGCTGAGGCTTCACCACGCGCAAAGCCTGGCAAGAGGGTCCCCT +
Preference number: 6 (lower is better)
Translates to: RAWEAWERNIKFHGY*LRLHHAQSLARGSP
Trigger: AGGGGACCCTCTTGCCAGGCTTTGCGCGTGGTGAAGCCTCAGCAAGTATCCATGGAACTTGATGTTACGCTCCCAGGCTTCCCACGCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560486.2
CDS TCA 72 bp AGACCCCGCATCTGTCCTCTTTGGCTGCAGACCCGATaGTGCCGTCACAGCCGATTTTCTGGCACTTGCCGT +
Preference number: 6 (lower is better)
Translates to: RPRICPLWLQTR*CRHSRFSGTCR
Trigger: ACGGCAAGTGCCAGAAAATCGGCTGTGACGGCATCATCGGGTCTGCAGCCAAAGAGGACAGATGCGGGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268070.9
ENST00000378898.8
ENST00000568565.2
CDS CCA 72 bp CCTGACATGATGTGGGACCTGCCAGCGCAAGATGAGTaGTCATCGTCGTGGTTCATGCCCAAGTTGTGGCCC +
Preference number: 6 (lower is better)
Translates to: PDMMWDLPAQDE*SSSWFMPKLWP
Trigger: GGGCCACAACTTGGGCATGAACCACGACGATGACCACTCATCTTGCGCTGGCAGGTCCCACATCATGTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268070.9
ENST00000378898.8
ENST00000568565.2
CDS CAA 72 bp CGCCAAGCTGCAGAGGCCACAGGTAGACGCTCCACGTaGTTGTCCTTGTCTTCAAGTCATCCACCTCCAGGC +
Preference number: 6 (lower is better)
Translates to: RQAAEATGRRST*LSLSSSHPPPG
Trigger: GCCTGGAGGTGGATGACTTGAAGACAAGGACAACAACGTGGAGCGTCTACCTGTGGCCTCTGCAGCTTGGCG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561355.2
CDS CAA 72 bp GGCAGCCACCTAGCCACCTGTTTGTCAGGGAACGTCTaGGAGAATACACTGTCCGGCTTGACCACAGCCTGG +
Preference number: 6 (lower is better)
Translates to: GSHLATCLSGNV*ENTLSGLTTAW
Trigger: CCAGGCTGTGGTCAAGCCGGACAGTGTATTCTCCAAGACGTTCCCTGACAAACAGGTGGCTAGGTGGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560486.2
CDS CAA 72 bp GCTCACGTCCTCCATGGCAGCCACCTAGCCACCTGTTaGTCAGGGAACGTCTTGGAGAATACACTGTCCGGC +
Preference number: 6 (lower is better)
Translates to: AHVLHGSHLATC*SGNVLENTLSG
Trigger: GCCGGACAGTGTATTCTCCAAGACGTTCCCTGACAAACAGGTGGCTAGGTGGCTGCCATGGAGGACGTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560486.2
CDS TCA 72 bp CACTTGGGTTCCGGCCTTTCACCCACTCTCCTGACATaGTGTGGGACCTGCCAGCGCAAGATGAGTGGTCAT +
Preference number: 6 (lower is better)
Translates to: HLGSGLSPTLLT*CGTCQRKMSGH
Trigger: ATGACCACTCATCTTGCGCTGGCAGGTCCCACATCATGTCAGGAGAGTGGGTGAAAGGCCGGAACCCAAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268070.9
ENST00000378898.8
ENST00000568565.2
CDS CCA 72 bp CAGCTCCTGCTAGACATGTCATGCTCACGTCCTCCATaGCAGCCACCTAGCCACCTGTTTGTCAGGGAACGT +
Preference number: 6 (lower is better)
Translates to: QLLLDMSCSRPP*QPPSHLFVRER
Trigger: ACGTTCCCTGACAAACAGGTGGCTAGGTGGCTGCCATGGAGGACGTGAGCATGACATGTCTAGCAGGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560486.2
CDS CCA 72 bp CAGAAGGTAAAGGGAAGGGTGCCCCGAGGAGTTAGATaGTATTATGCTGGAGGGGAAGGTCTGGCCAGAGGG +
Preference number: 6 (lower is better)
Translates to: QKVKGRVPRGVR*YYAGGEGLARG
Trigger: CCCTCTGGCCAGACCTTCCCCTCCAGCATAATACCATCTAACTCCTCGGGGCACCCTTCCCTTTACCTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560486.2
CDS CCA 72 bp TACCCAGCAGCCATGGCCTCACGAGCGTGGGAAGCCTaGGAGCGTAACATCAAGTTCCATGGATACTTGCTG +
Preference number: 6 (lower is better)
Translates to: YPAAMASRAWEA*ERNIKFHGYLL
Trigger: CAGCAAGTATCCATGGAACTTGATGTTACGCTCCCAGGCTTCCCACGCTCGTGAGGCCATGGCTGCTGGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560486.2
CDS CAA 72 bp ATCAGATGTTCTCGTCCACTGAATGGGCCCTGGGAGTaGTTGAGGGGCTGGATTAGCACCTGCTCCTGCCCA +
Preference number: 6 (lower is better)
Translates to: IRCSRPLNGPWE*LRGWISTCSCP
Trigger: TGGGCAGGAGCAGGTGCTAATCCAGCCCCTCAACAACTCCCAGGGCCCATTCAGTGGACGAGAACATCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268070.9
ENST00000378898.8
ENST00000558960.1
ENST00000561355.2
ENST00000568565.2
CDS CAA 90 bp GTCCTCCATGGCAGCCACCTAGCCACCTGTTTGTCAGGGAACGTCTaGGAGAATACACTGTCCGGCTTGACCACAGCCTGGTCACAAACA +
Preference number: 6 (lower is better)
Translates to: VLHGSHLATCLSGNV*ENTLSGLTTAWSQT
Trigger: TGTTTGTGACCAGGCTGTGGTCAAGCCGGACAGTGTATTCTCCAAGACGTTCCCTGACAAACAGGTGGCTAGGTGGCTGCCATGGAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560486.2
CDS TCA 72 bp CCTGGGAGCGTAACATCAAGTTCCATGGATACTTGCTaGGGCTTCACCACGCGCAAAGCCTGGCAAGAGGGT +
Preference number: 6 (lower is better)
Translates to: PGSVTSSSMDTC*GFTTRKAWQEG
Trigger: ACCCTCTTGCCAGGCTTTGCGCGTGGTGAAGCCTCAGCAAGTATCCATGGAACTTGATGTTACGCTCCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560486.2
CDS GCA 72 bp CCACAGCCCCCTTCTCACATAGCGAACAGTTGTGCCTaGAATCTGGAACTCTCCGGGGAGCTCTATCTTCCA +
Preference number: 6 (lower is better)
Translates to: PQPPSHIANSCA*NLELSGELYLP
Trigger: TGGAAGATAGAGCTCCCCGGAGAGTTCCAGATTGCAGGCACAACTGTTCGCTATGTGAGAAGGGGGCTGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268070.9
ENST00000568565.2
CDS GCA 72 bp TCTCCCACAGCCCCCTTCTCACATAGCGAACAGTTGTaGCTGCAATCTGGAACTCTCCGGGGAGCTCTATCT +
Preference number: 6 (lower is better)
Translates to: SPTAPFSHSEQL*LQSGTLRGALS
Trigger: AGATAGAGCTCCCCGGAGAGTTCCAGATTGCAGGCACAACTGTTCGCTATGTGAGAAGGGGGCTGTGGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268070.9
ENST00000568565.2
CDS CAA 72 bp TCTTCTCCCACAGCCCCCTTCTCACATAGCGAACAGTaGTGCCTGCAATCTGGAACTCTCCGGGGAGCTCTA +
Preference number: 6 (lower is better)
Translates to: SSPTAPFSHSEQ*CLQSGTLRGAL
Trigger: TAGAGCTCCCCGGAGAGTTCCAGATTGCAGGCACAACTGTTCGCTATGTGAGAAGGGGGCTGTGGGAGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268070.9
ENST00000568565.2
CDS CAA 90 bp ACATGTCATGCTCACGTCCTCCATGGCAGCCACCTAGCCACCTGTTaGTCAGGGAACGTCTTGGAGAATACACTGTCCGGCTTGACCACA +
Preference number: 6 (lower is better)
Translates to: TCHAHVLHGSHLATC*SGNVLENTLSGLTT
Trigger: TGTGGTCAAGCCGGACAGTGTATTCTCCAAGACGTTCCCTGACAAACAGGTGGCTAGGTGGCTGCCATGGAGGACGTGAGCATGACATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560486.2
CDS CAA 90 bp CCTGCAATCTGGAACTCTCCGGGGAGCTCTATCTTCCAGTCACTGTaGATGGACCCCTTACCCGAGTCTTTGAGAGCCAGAAAGCTGTGG +
Preference number: 6 (lower is better)
Translates to: PAIWNSPGSSIFQSL*MDPLPESLRARKLW
Trigger: CCACAGCTTTCTGGCTCTCAAAGACTCGGGTAAGGGGTCCATCAACAGTGACTGGAAGATAGAGCTCCCCGGAGAGTTCCAGATTGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568565.2
CDS CAA 72 bp GGGCAGTCACTGTCGTTCACCAGAGTTGTGGTCTTGTaGACAATCCGTGTACACGAGACGATGGTTCTGCGC +
Preference number: 6 (lower is better)
Translates to: GQSLSFTRVVVL*TIRVHETMVLR
Trigger: GCGCAGAACCATCGTCTCGTGTACACGGATTGTCAACAAGACCACAACTCTGGTGAACGACAGTGACTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268070.9
ENST00000568565.2
CDS CAA 72 bp GAAGCCTGGGAGCGTAACATCAAGTTCCATGGATACTaGCTGAGGCTTCACCACGCGCAAAGCCTGGCAAGA +
Preference number: 6 (lower is better)
Translates to: EAWERNIKFHGY*LRLHHAQSLAR
Trigger: TCTTGCCAGGCTTTGCGCGTGGTGAAGCCTCAGCAAGTATCCATGGAACTTGATGTTACGCTCCCAGGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560486.2
CDS TCA 72 bp GGCAGTCACTGTCGTTCACCAGAGTTGTGGTCTTGTTaGCAATCCGTGTACACGAGACGATGGTTCTGCGCT +
Preference number: 6 (lower is better)
Translates to: GSHCRSPELWSC*QSVYTRRWFCA
Trigger: AGCGCAGAACCATCGTCTCGTGTACACGGATTGTCAACAAGACCACAACTCTGGTGAACGACAGTGACTGCC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268070.9
ENST00000568565.2
CDS TCA 72 bp GGGGAAGTGTCCAATGTCCAGCTCACACGAACGGGATaGACAAGGCAGACTAAACAACAGAAGTGTCTGCTC +
Preference number: 6 (lower is better)
Translates to: GEVSNVQLTRTG*TRQTKQQKCLL
Trigger: GAGCAGACACTTCTGTTGTTTAGTCTGCCTTGTTCATCCCGTTCGTGTGAGCTGGACATTGGACACTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378898.8
CDS GCA 72 bp CCTTCTACCAGGCACCACAGTCCAGCACACATTAGATaGTCCATGTTTCTGCAGAAGGTGGCATTCATGCCA +
Preference number: 6 (lower is better)
Translates to: PSTRHHSPAHIR*SMFLQKVAFMP
Trigger: TGGCATGAATGCCACCTTCTGCAGAAACATGGAGCATCTAATGTGTGCTGGACTGTGGTGCCTGGTAGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268070.9
ENST00000378898.8
ENST00000568565.2
CDS CCA 72 bp CCTTCAGATAAATGGCCACGGTCGGTAGAAAGCCACTaGGATGTGGTACAGCATCTCTTTGCCTTAGGAAGC +
Preference number: 6 (lower is better)
Translates to: PSDKWPRSVESH*DVVQHLFALGS
Trigger: GCTTCCTAAGGCAAAGAGATGCTGTACCACATCCCAGTGGCTTTCTACCGACCGTGGCCATTTATCTGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557896.1
CDS TCA 72 bp CAACAGAAGTGTCTGCTCCGGCAGGAATTTAAAAGCTaGAGTCTTAGAGGTACAACCGCCACTGGCACACAC +
Preference number: 6 (lower is better)
Translates to: QQKCLLRQEFKS*SLRGTTATGTH
Trigger: GTGTGTGCCAGTGGCGGTTGTACCTCTAAGACTTCAGCTTTTAAATTCCTGCCGGAGCAGACACTTCTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378898.8
CDS CCA 72 bp GTGGGTCCAGATGAACAAAGAGTCCTGCGGTTTTTCTaGTTCGCTTTGATTTTCCGCAGTGCGGTTTACAGG +
Preference number: 6 (lower is better)
Translates to: VGPDEQRVLRFF*FALIFRSAVYR
Trigger: CCTGTAAACCGCACTGCGGAAAATCAAAGCGAACCAGAAAAACCGCAGGACTCTTTGTTCATCTGGACCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268070.9
ENST00000568565.2
CDS CAA 72 bp AGCTCATGGGCGATGGTAAAGGCCAAATTGAGACCATaGTCTTCGGCAAGCACACACTTCCTCTTAGCACTG +
Preference number: 6 (lower is better)
Translates to: SSWAMVKAKLRP*SSASTHFLLAL
Trigger: CAGTGCTAAGAGGAAGTGTGTGCTTGCCGAAGACAATGGTCTCAATTTGGCCTTTACCATCGCCCATGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268070.9
ENST00000378898.8
ENST00000559976.1
ENST00000568565.2
CDS CAA 90 bp GTGGGTCCAGATGAACAAAGAGTCCTGCGGTTTTTCTGGTTCGCTTaGATTTTCCGCAGTGCGGTTTACAGGAACAGTGTATTCATAATG +
Preference number: 6 (lower is better)
Translates to: VGPDEQRVLRFFWFA*IFRSAVYRNSVFIM
Trigger: CATTATGAATACACTGTTCCTGTAAACCGCACTGCGGAAAATCAAAGCGAACCAGAAAAACCGCAGGACTCTTTGTTCATCTGGACCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268070.9
ENST00000568565.2
CDS CAA 72 bp GATGAACAAAGAGTCCTGCGGTTTTTCTGGTTCGCTTaGATTTTCCGCAGTGCGGTTTACAGGAACAGTGTA +
Preference number: 6 (lower is better)
Translates to: DEQRVLRFFWFA*IFRSAVYRNSV
Trigger: TACACTGTTCCTGTAAACCGCACTGCGGAAAATCAAAGCGAACCAGAAAAACCGCAGGACTCTTTGTTCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268070.9
ENST00000568565.2
CDS TCA 72 bp ATGAACAAAGAGTCCTGCGGTTTTTCTGGTTCGCTTTaGTTTTCCGCAGTGCGGTTTACAGGAACAGTGTAT +
Preference number: 6 (lower is better)
Translates to: MNKESCGFSGSL*FSAVRFTGTVY
Trigger: ATACACTGTTCCTGTAAACCGCACTGCGGAAAATCAAAGCGAACCAGAAAAACCGCAGGACTCTTTGTTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268070.9
ENST00000568565.2
CDS GCA 72 bp CCTGCGGTTTTTCTGGTTCGCTTTGATTTTCCGCAGTaGGGTTTACAGGAACAGTGTATTCATAATGAATTC +
Preference number: 6 (lower is better)
Translates to: PAVFLVRFDFPQ*GLQEQCIHNEF
Trigger: GAATTCATTATGAATACACTGTTCCTGTAAACCGCACTGCGGAAAATCAAAGCGAACCAGAAAAACCGCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268070.9
ENST00000568565.2