RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADAMDEC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000134028

Ensembl transcript IDs: ENST00000256412.8, ENST00000520193.1, ENST00000522298.1

Found 228 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGAATTGGGCCTTGTTTCCCGTCAGTGCTCTTCACACCACATGTGTaGTTAGCTGGGTCTTGTTCCTCCTGGTTAGATGTAAAGACGGCA +
Preference number: 1 (lower is better)
Translates to: RIGPCFPSVLFTPHV*LAGSCSSWLDVKTA
Trigger: TGCCGTCTTTACATCTAACCAGGAGGAACAAGACCCAGCTAACCACACATGTGGTGTGAAGAGCACTGACGGGAAACAAGGCCCAATTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520193.1
3UTR TCA 90 bp GTGTTCCATGTTCTCAGGTTTCGTGGTAATTTCCTCTCCTCTGGGTaGGTACAATGTTTCAGTGTAGTCTGGCCCCAGGAGGTGCTTGGT +
Preference number: 1 (lower is better)
Translates to: VFHVLRFRGNFLSSG*VQCFSVVWPQEVLG
Trigger: ACCAAGCACCTCCTGGGGCCAGACTACACTGAAACATTGTACTCACCCAGAGGAGAGGAAATTACCACGAAACCTGAGAACATGGAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520193.1
3UTR TCA 90 bp TCAGATACTGATTCATCACACAACTGCCAGAGGGACACTTGGTGTTaGATGGAACATCAGGCATACCAAGGACATGGCCCAGCTCATGTG +
Preference number: 1 (lower is better)
Translates to: SDTDSSHNCQRDTWC*MEHQAYQGHGPAHV
Trigger: CACATGAGCTGGGCCATGTCCTTGGTATGCCTGATGTTCCATTCAACACCAAGTGTCCCTCTGGCAGTTGTGTGATGAATCAGTATCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520193.1
3UTR CCA 90 bp GCCTTGTTTCCCGTCAGTGCTCTTCACACCACATGTGTGGTTAGCTaGGTCTTGTTCCTCCTGGTTAGATGTAAAGACGGCATGTTCTTT +
Preference number: 1 (lower is better)
Translates to: ALFPVSALHTTCVVS*VLFLLVRCKDGMFF
Trigger: AAAGAACATGCCGTCTTTACATCTAACCAGGAGGAACAAGACCCAGCTAACCACACATGTGGTGTGAAGAGCACTGACGGGAAACAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520193.1
3UTR CCA 90 bp GAGGGACACTTGGTGTTGAATGGAACATCAGGCATACCAAGGACATaGCCCAGCTCATGTGACATCACTCCTACAAGAGCCACATTATTC +
Preference number: 1 (lower is better)
Translates to: EGHLVLNGTSGIPRT*PSSCDITPTRATLF
Trigger: GAATAATGTGGCTCTTGTAGGAGTGATGTCACATGAGCTGGGCCATGTCCTTGGTATGCCTGATGTTCCATTCAACACCAAGTGTCCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520193.1
3UTR CCA 90 bp GTGCTCTTCACACCACATGTGTGGTTAGCTGGGTCTTGTTCCTCCTaGTTAGATGTAAAGACGGCATGTTCTTTCTCGTCTGTGCTTTTC +
Preference number: 1 (lower is better)
Translates to: VLFTPHVWLAGSCSS*LDVKTACSFSSVLF
Trigger: GAAAAGCACAGACGAGAAAGAACATGCCGTCTTTACATCTAACCAGGAGGAACAAGACCCAGCTAACCACACATGTGGTGTGAAGAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520193.1
3UTR TCA 90 bp ACAGTTAGAGTTCTTGGTTCTTGTCCTGGCAAGGTAGCATCTCAGTaGAGCAGACTTTTGGATTCACTCTGTGGTATGGTTTGGAGCATC +
Preference number: 1 (lower is better)
Translates to: TVRVLGSCPGKVASQ*SRLLDSLCGMVWSI
Trigger: GATGCTCCAAACCATACCACAGAGTGAATCCAAAAGTCTGCTTCACTGAGATGCTACCTTGCCAGGACAAGAACCAAGAACTCTAACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520193.1
3UTR TCA 90 bp GGAGTGTTAACTCTGAATAGTTTAGCCGTGCATTTTAAGGTGATTTaGTGGAAGACTGCTTTCTTTTGTTCTCCAAAGGGCAGAACTAAG +
Preference number: 1 (lower is better)
Translates to: GVLTLNSLAVHFKVI*WKTAFFCSPKGRTK
Trigger: CTTAGTTCTGCCCTTTGGAGAACAAAAGAAAGCAGTCTTCCATCAAATCACCTTAAAATGCACGGCTAAACTATTCAGAGTTAACACTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
3UTR TCA 90 bp ATTATATTTGTAGGAATAGGTGCTTGCAGCAGGCACTTTGGTTTCTaGGATAAAAGGTATCTTTCAAAATGTGCACGGCAAGATGTACTG +
Preference number: 1 (lower is better)
Translates to: IIFVGIGACSRHFGF*DKRYLSKCARQDVL
Trigger: CAGTACATCTTGCCGTGCACATTTTGAAAGATACCTTTTATCTCAGAAACCAAAGTGCCTGCTGCAAGCACCTATTCCTACAAATATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520193.1
3UTR-3UTR TCA 90 bp TCAGGCATACCAAGGACATGGCCCAGCTCATGTGACATCACTCCTACAAGAGCCATCCCGCTGAGAAGCTaGGCATGGTCGTGGATCTTT +
Preference number: 2 (lower is better)
Translates to: SGIPRTWPSSCDITPTRAIPLRS*AWSWIF
Trigger: AAAGATCCACGACCATGCTCAGCTTCTCAGCGGGAT...GGCTCTTGTAGGAGTGATGTCACATGAGCTGGGCCATGTCCTTGGTATGCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520193.1
3UTR-3UTR CCA 90 bp TCAGGCATACCAAGGACATGGCCCAGCTCATGTGACATCACTCCTACAAGAGCCACGTGGTGCTTGCGCTaGGCACCACCTTTATCTTAT +
Preference number: 2 (lower is better)
Translates to: SGIPRTWPSSCDITPTRATWCLR*APPLSY
Trigger: ATAAGATAAAGGTGGTGCCCAGCGCAAGCACCACGT...GGCTCTTGTAGGAGTGATGTCACATGAGCTGGGCCATGTCCTTGGTATGCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520193.1
3UTR-3UTR CCA 90 bp CTCCTCCGCAATCAGTTCCAGGCTTCAGTTTACACGTTAGGGCTTCACAGCAGAGGCATACCAAGGACATaGCCCAGCTCATGTGACATC +
Preference number: 2 (lower is better)
Translates to: LLRNQFQASVYTLGLHSRGIPRT*PSSCDI
Trigger: GATGTCACATGAGCTGGGCCATGTCCTTGGTATGCC...TCTGCTGTGAAGCCCTAACGTGTAAACTGAAGCCTGGAACTGATTGCGGAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520193.1
3UTR-3UTR GCA 90 bp TCAGGCATACCAAGGACATGGCCCAGCTCATGTGACATCACTCCTACAAGAGCCCTTGTTTCCCGTCAGTaGTCTTCACACCACATGTGT +
Preference number: 2 (lower is better)
Translates to: SGIPRTWPSSCDITPTRALVSRQ*SSHHMC
Trigger: ACACATGTGGTGTGAAGAGCACTGACGGGAAACAAG...GGCTCTTGTAGGAGTGATGTCACATGAGCTGGGCCATGTCCTTGGTATGCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520193.1
3UTR-3UTR CCA 90 bp CTGATTCATCACACAACTGCCAGAGGGACACTTGGTGTTGAATGGAACATCAGGGGAAGTTGTCAAACGTaGTGCTTGCGCTGGGCACCA +
Preference number: 2 (lower is better)
Translates to: LIHHTTARGTLGVEWNIRGSCQT*CLRWAP
Trigger: TGGTGCCCAGCGCAAGCACCACGTTTGACAACTTCC...CCTGATGTTCCATTCAACACCAAGTGTCCCTCTGGCAGTTGTGTGATGAATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520193.1
3UTR CAA 90 bp TCGTGGATCTTTTTCCCCAGGTTAGAACTGTGCCATCTCAGGAAGTaGTCAAACGTGGTGCTTGCGCTGGGCACCACCTTTATCTTATCC +
Preference number: 2 (lower is better)
Translates to: SWIFFPRLELCHLRK*SNVVLALGTTFILS
Trigger: GGATAAGATAAAGGTGGTGCCCAGCGCAAGCACCACGTTTGACAACTTCCTGAGATGGCACAGTTCTAACCTGGGGAAAAAGATCCACGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520193.1
3UTR-3UTR TCA 90 bp CTTTTGGATTCACTCTGTGGTATGGTTTGGAGCATCTCCTCCGCAATCAGTTCCGGAACACAAGGAATTTaGAGCTGCCAGTCCCACACG +
Preference number: 2 (lower is better)
Translates to: LLDSLCGMVWSISSAISSGTQGI*SCQSHT
Trigger: CGTGTGGGACTGGCAGCTTCAAATTCCTTGTGTTCC...GGAACTGATTGCGGAGGAGATGCTCCAAACCATACCACAGAGTGAATCCAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520193.1
3UTR-3UTR TCA 90 bp CTCCTCCGCAATCAGTTCCAGGCTTCAGTTTACACGTTAGGGCTTCACAGCAGAAGGGACACTTGGTGTTaGATGGAACATCAGGCATAC +
Preference number: 2 (lower is better)
Translates to: LLRNQFQASVYTLGLHSRRDTWC*MEHQAY
Trigger: GTATGCCTGATGTTCCATTCAACACCAAGTGTCCCT...TCTGCTGTGAAGCCCTAACGTGTAAACTGAAGCCTGGAACTGATTGCGGAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520193.1
3UTR CAA 90 bp TTTCCCGTCAGTGCTCTTCACACCACATGTGTGGTTAGCTGGGTCTaGTTCCTCCTGGTTAGATGTAAAGACGGCATGTTCTTTCTCGTC +
Preference number: 2 (lower is better)
Translates to: FPVSALHTTCVVSWV*FLLVRCKDGMFFLV
Trigger: GACGAGAAAGAACATGCCGTCTTTACATCTAACCAGGAGGAACAAGACCCAGCTAACCACACATGTGGTGTGAAGAGCACTGACGGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520193.1
3UTR-3UTR TCA 90 bp CTCCTCCGCAATCAGTTCCAGGCTTCAGTTTACACGTTAGGGCTTCACAGCAGATTCCTCTCCTCTGGGTaGGTACAATGTTTCAGTGTA +
Preference number: 2 (lower is better)
Translates to: LLRNQFQASVYTLGLHSRFLSSG*VQCFSV
Trigger: TACACTGAAACATTGTACTCACCCAGAGGAGAGGAA...TCTGCTGTGAAGCCCTAACGTGTAAACTGAAGCCTGGAACTGATTGCGGAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520193.1
3UTR-3UTR TCA 90 bp CCAGAGGGACACTTGGTGTTGAATGGAACATCAGGCATACCAAGGACATGGCCCCCTACCAAGGCCACTTaGACATCTATGGTGTTATAT +
Preference number: 2 (lower is better)
Translates to: PEGHLVLNGTSGIPRTWPPTKAT*TSMVLY
Trigger: ATATAACACCATAGATGTTCAAGTGGCCTTGGTAGG...GGGCCATGTCCTTGGTATGCCTGATGTTCCATTCAACACCAAGTGTCCCTCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520193.1
3UTR-3UTR GCA 90 bp CTCCTCCGCAATCAGTTCCAGGCTTCAGTTTACACGTTAGGGCTTCACAGCAGAATTTGTAGGAATAGGTaGTTGCAGCAGGCACTTTGG +
Preference number: 2 (lower is better)
Translates to: LLRNQFQASVYTLGLHSRICRNR*LQQALW
Trigger: CCAAAGTGCCTGCTGCAAGCACCTATTCCTACAAAT...TCTGCTGTGAAGCCCTAACGTGTAAACTGAAGCCTGGAACTGATTGCGGAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520193.1
3UTR-3UTR TCA 90 bp GCTGAGAAGCTGAGCATGGTCGTGGATCTTTTTCCCCAGGTTAGAACTGTGCCACCGTGCATTTTAAGGTaGTTTGATGGAAGACTGCTT +
Preference number: 2 (lower is better)
Translates to: AEKLSMVVDLFPQVRTVPPCILR*FDGRLL
Trigger: AAGCAGTCTTCCATCAAATCACCTTAAAATGCACGG...TGGCACAGTTCTAACCTGGGGAAAAAGATCCACGACCATGCTCAGCTTCTCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000520193.1
3UTR-3UTR TCA 90 bp CTTTTGGATTCACTCTGTGGTATGGTTTGGAGCATCTCCTCCGCAATCAGTTCCACCCGTCACAAGTACTaGTGCTGGCAACAGAATTCT +
Preference number: 2 (lower is better)
Translates to: LLDSLCGMVWSISSAISSTRHKY*CWQQNS
Trigger: AGAATTCTGTTGCCAGCATCAGTACTTGTGACGGGT...GGAACTGATTGCGGAGGAGATGCTCCAAACCATACCACAGAGTGAATCCAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520193.1
3UTR-3UTR CCA 90 bp TCAGGCATACCAAGGACATGGCCCAGCTCATGTGACATCACTCCTACAAGAGCCCCATGCTTTTCTGTCTaGTTGTTCTTGATCTCTCTT +
Preference number: 2 (lower is better)
Translates to: SGIPRTWPSSCDITPTRAPCFSV*LFLISL
Trigger: AAGAGAGATCAAGAACAACCAGACAGAAAAGCATGG...GGCTCTTGTAGGAGTGATGTCACATGAGCTGGGCCATGTCCTTGGTATGCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520193.1
3UTR-3UTR CCA 90 bp CTCCTCCGCAATCAGTTCCAGGCTTCAGTTTACACGTTAGGGCTTCACAGCAGAACACTTGGTGTTGAATaGAACATCAGGCATACCAAG +
Preference number: 2 (lower is better)
Translates to: LLRNQFQASVYTLGLHSRTLGVE*NIRHTK
Trigger: CTTGGTATGCCTGATGTTCCATTCAACACCAAGTGT...TCTGCTGTGAAGCCCTAACGTGTAAACTGAAGCCTGGAACTGATTGCGGAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520193.1
3UTR-3UTR TCA 90 bp TTGTCAAACGTGGTGCTTGCGCTGGGCACCACCTTTATCTTATCCCCATCAGACAAAGACCATTATGGGTaGAAATTCACAAGATTCCTG +
Preference number: 2 (lower is better)
Translates to: LSNVVLALGTTFILSPSDKDHYG*KFTRFL
Trigger: CAGGAATCTTGTGAATTTTCACCCATAATGGTCTTT...GTCTGATGGGGATAAGATAAAGGTGGTGCCCAGCGCAAGCACCACGTTTGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520193.1
3UTR-3UTR TCA 90 bp ACGTGGTGCTTGCGCTGGGCACCACCTTTATCTTATCCCCATCAGACCAGATTTCTGTCTGGTTGTTCTTaGTCTCTCTTTTGTGTAAAA +
Preference number: 2 (lower is better)
Translates to: TWCLRWAPPLSYPHQTRFLSGCS*SLFCVK
Trigger: TTTTACACAAAAGAGAGATCAAGAACAACCAGACAG...AAATCTGGTCTGATGGGGATAAGATAAAGGTGGTGCCCAGCGCAAGCACCACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520193.1
3UTR-3UTR GCA 90 bp GCTGAGAAGCTGAGCATGGTCGTGGATCTTTTTCCCCAGGTTAGAACTGTGCCAGATTTGATGGAAGACTaGTTTCTTTTGTTCTCCAAA +
Preference number: 2 (lower is better)
Translates to: AEKLSMVVDLFPQVRTVPDLMED*FLLFSK
Trigger: TTTGGAGAACAAAAGAAAGCAGTCTTCCATCAAATC...TGGCACAGTTCTAACCTGGGGAAAAAGATCCACGACCATGCTCAGCTTCTCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000520193.1
3UTR-3UTR GCA 90 bp CTCCGCAATCAGTTCCAGGCTTCAGTTTACACGTTAGGGCTTCACAGCAGAGATGTTAATTCAGGTGTTTaGTTTATGGCTATTGCTTCT +
Preference number: 2 (lower is better)
Translates to: LRNQFQASVYTLGLHSRDVNSGV*FMAIAS
Trigger: AGAAGCAATAGCCATAAAGCAAACACCTGAATTAAC...ATCTCTGCTGTGAAGCCCTAACGTGTAAACTGAAGCCTGGAACTGATTGCGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520193.1
3UTR-3UTR CCA 90 bp GAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATAACAATATGTTTCAGTGTAGTCTaGCCCCAGGAGGTGCTTGGT +
Preference number: 2 (lower is better)
Translates to: EPMSLITSVYLFPGLITICFSVV*PQEVLG
Trigger: ACCAAGCACCTCCTGGGGCCAGACTACACTGAAACA...TATTGTTATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520193.1
3UTR CAA 90 bp ATGTTCTTTCTCGTCTGTGCTTTTCAGAGGTTTTATCTGGTATCTTaGGTGATGATGTGTGAAGTATCCTCTCAACCCGTCACAAGTACT +
Preference number: 2 (lower is better)
Translates to: MFFLVCAFQRFYLVS*VMMCEVSSQPVTST
Trigger: AGTACTTGTGACGGGTTGAGAGGATACTTCACACATCATCACCAAAGATACCAGATAAAACCTCTGAAAAGCACAGACGAGAAAGAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520193.1
3UTR-3UTR CCA 90 bp ATTAGGCCTAAACAAAGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCGGGTCTTGTTCCTCCTaGTTAGATGTAAAGACGGCA +
Preference number: 2 (lower is better)
Translates to: IRPKQRANVSNYICLPVSGSCSS*LDVKTA
Trigger: TGCCGTCTTTACATCTAACCAGGAGGAACAAGACCC...GGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCTTTGTTTAGGCCTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520193.1
3UTR-3UTR TCA 90 bp GAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATAACAATATTTGGTGATGATGTGTaGAGTATCCTCTCAACCCGT +
Preference number: 2 (lower is better)
Translates to: EPMSLITSVYLFPGLITIFGDDV*SILSTR
Trigger: ACGGGTTGAGAGGATACTTCACACATCATCACCAAA...TATTGTTATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520193.1
3UTR-3UTR TCA 90 bp AGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATAACAATCCGTGCATTTTAAGGTaGTTTGATGGAAGACTGCTT +
Preference number: 2 (lower is better)
Translates to: RANVSNYICLPVSWTDNNPCILR*FDGRLL
Trigger: AAGCAGTCTTCCATCAAATCACCTTAAAATGCACGG...ATTGTTATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
3UTR-3UTR TCA 90 bp GAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATAACAATAAAGGTAGCATCTCAGTaGAGCAGACTTTTGGATTCA +
Preference number: 2 (lower is better)
Translates to: EPMSLITSVYLFPGLITIKVASQ*SRLLDS
Trigger: TGAATCCAAAAGTCTGCTTCACTGAGATGCTACCTT...TATTGTTATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520193.1
3UTR-3UTR GCA 90 bp CTAAACAAAGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGGTTCTTTCTCGTCTGTaGTTTTCAGAGGTTTTATCT +
Preference number: 2 (lower is better)
Translates to: LNKEPMSLITSVYLFPGLVLSRL*FSEVLS
Trigger: AGATAAAACCTCTGAAAAGCACAGACGAGAAAGAAC...CAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCTTTGTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520193.1
3UTR-3UTR TCA 90 bp ATTAGGCCTAAACAAAGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCAAAGACCATTATGGGTaGAAATTCACAAGATTCCTG +
Preference number: 2 (lower is better)
Translates to: IRPKQRANVSNYICLPVSKDHYG*KFTRFL
Trigger: CAGGAATCTTGTGAATTTTCACCCATAATGGTCTTT...GGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCTTTGTTTAGGCCTAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
3UTR-3UTR TCA 90 bp AACAATTCTGGAGTGTTAACTCTGAATAGTTTAGCCGTGCATTTTAAGGTGATTAAAGACCATTATGGGTaGAAATTCACAAGATTCCTG +
Preference number: 2 (lower is better)
Translates to: NNSGVLTLNSLAVHFKVIKDHYG*KFTRFL
Trigger: CAGGAATCTTGTGAATTTTCACCCATAATGGTCTTT...AATCACCTTAAAATGCACGGCTAAACTATTCAGAGTTAACACTCCAGAATTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
3UTR-3UTR GCA 90 bp GAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATAACAATAGATTTGATGGAAGACTaGTTTCTTTTGTTCTCCAAA +
Preference number: 2 (lower is better)
Translates to: EPMSLITSVYLFPGLITIDLMED*FLLFSK
Trigger: TTTGGAGAACAAAAGAAAGCAGTCTTCCATCAAATC...TATTGTTATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
3UTR-3UTR GCA 90 bp AGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATAACAATGATTTGATGGAAGACTaGTTTCTTTTGTTCTCCAAA +
Preference number: 2 (lower is better)
Translates to: RANVSNYICLPVSWTDNNDLMED*FLLFSK
Trigger: TTTGGAGAACAAAAGAAAGCAGTCTTCCATCAAATC...ATTGTTATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
3UTR CCA 72 bp CCCGTCAGTGCTCTTCACACCACATGTGTGGTTAGCTaGGTCTTGTTCCTCCTGGTTAGATGTAAAGACGGC +
Preference number: 3 (lower is better)
Translates to: PVSALHTTCVVS*VLFLLVRCKDG
Trigger: GCCGTCTTTACATCTAACCAGGAGGAACAAGACCCAGCTAACCACACATGTGGTGTGAAGAGCACTGACGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520193.1
3UTR CCA 72 bp GCCATCTCAGGAAGTTGTCAAACGTGGTGCTTGCGCTaGGCACCACCTTTATCTTATCCCCATCAGACCAGA +
Preference number: 3 (lower is better)
Translates to: AISGSCQTWCLR*APPLSYPHQTR
Trigger: TCTGGTCTGATGGGGATAAGATAAAGGTGGTGCCCAGCGCAAGCACCACGTTTGACAACTTCCTGAGATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520193.1
3UTR CCA 72 bp CATCACACAACTGCCAGAGGGACACTTGGTGTTGAATaGAACATCAGGCATACCAAGGACATGGCCCAGCTC +
Preference number: 3 (lower is better)
Translates to: HHTTARGTLGVE*NIRHTKDMAQL
Trigger: GAGCTGGGCCATGTCCTTGGTATGCCTGATGTTCCATTCAACACCAAGTGTCCCTCTGGCAGTTGTGTGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520193.1
3UTR-3UTR CAA 90 bp TGTCAAACGTGGTGCTTGCGCTGGGCACCACCTTTATCTTATCCCCATCAGACCGTGGTTAGCTGGGTCTaGTTCCTCCTGGTTAGATGT +
Preference number: 3 (lower is better)
Translates to: CQTWCLRWAPPLSYPHQTVVSWV*FLLVRC
Trigger: ACATCTAACCAGGAGGAACAAGACCCAGCTAACCAC...GGTCTGATGGGGATAAGATAAAGGTGGTGCCCAGCGCAAGCACCACGTTTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520193.1
3UTR GCA 72 bp GCATGGTCGTGGATCTTTTTCCCCAGGTTAGAACTGTaGCATCTCAGGAAGTTGTCAAACGTGGTGCTTGCG +
Preference number: 3 (lower is better)
Translates to: AWSWIFFPRLEL*HLRKLSNVVLA
Trigger: CGCAAGCACCACGTTTGACAACTTCCTGAGATGGCACAGTTCTAACCTGGGGAAAAAGATCCACGACCATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520193.1
3UTR-3UTR CAA 90 bp ACCACATGTGTGGTTAGCTGGGTCTTGTTCCTCCTGGTTAGATGTAAAGACGGCGGACAGTTAGAGTTCTaGGTTCTTGTCCTGGCAAGG +
Preference number: 3 (lower is better)
Translates to: TTCVVSWVLFLLVRCKDGGQLEF*VLVLAR
Trigger: CCTTGCCAGGACAAGAACCAAGAACTCTAACTGTCC...GCCGTCTTTACATCTAACCAGGAGGAACAAGACCCAGCTAACCACACATGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520193.1
3UTR TCA 72 bp GTTCTCAGGTTTCGTGGTAATTTCCTCTCCTCTGGGTaGGTACAATGTTTCAGTGTAGTCTGGCCCCAGGAG +
Preference number: 3 (lower is better)
Translates to: VLRFRGNFLSSG*VQCFSVVWPQE
Trigger: CTCCTGGGGCCAGACTACACTGAAACATTGTACTCACCCAGAGGAGAGGAAATTACCACGAAACCTGAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520193.1
3UTR TCA 72 bp GATTCATCACACAACTGCCAGAGGGACACTTGGTGTTaGATGGAACATCAGGCATACCAAGGACATGGCCCA +
Preference number: 3 (lower is better)
Translates to: DSSHNCQRDTWC*MEHQAYQGHGP
Trigger: TGGGCCATGTCCTTGGTATGCCTGATGTTCCATTCAACACCAAGTGTCCCTCTGGCAGTTGTGTGATGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520193.1
3UTR CCA 72 bp TTGGTGTTGAATGGAACATCAGGCATACCAAGGACATaGCCCAGCTCATGTGACATCACTCCTACAAGAGCC +
Preference number: 3 (lower is better)
Translates to: LVLNGTSGIPRT*PSSCDITPTRA
Trigger: GGCTCTTGTAGGAGTGATGTCACATGAGCTGGGCCATGTCCTTGGTATGCCTGATGTTCCATTCAACACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520193.1
3UTR TCA 72 bp TGCCCGAAGAAAGTCTTCTTTCTCTGGGCTTTTGAGTaGTCTAGAGATTCGAATTGGGCCTTGTTTCCCGTC +
Preference number: 3 (lower is better)
Translates to: CPKKVFFLWAFE*SRDSNWALFPV
Trigger: GACGGGAAACAAGGCCCAATTCGAATCTCTAGATCACTCAAAAGCCCAGAGAAAGAAGACTTTCTTCGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520193.1
3UTR CCA 72 bp ACACCACATGTGTGGTTAGCTGGGTCTTGTTCCTCCTaGTTAGATGTAAAGACGGCATGTTCTTTCTCGTCT +
Preference number: 3 (lower is better)
Translates to: TPHVWLAGSCSS*LDVKTACSFSS
Trigger: AGACGAGAAAGAACATGCCGTCTTTACATCTAACCAGGAGGAACAAGACCCAGCTAACCACACATGTGGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520193.1
3UTR-3UTR CAA 90 bp ATCTTTTTCCCCAGGTTAGAACTGTGCCATCTCAGGAAGTTGTCAAACGTGGTGGAAGACTGCTTTCTTTaGTTCTCCAAAGGGCAGAAC +
Preference number: 3 (lower is better)
Translates to: IFFPRLELCHLRKLSNVVEDCFL*FSKGQN
Trigger: GTTCTGCCCTTTGGAGAACAAAAGAAAGCAGTCTTC...CACCACGTTTGACAACTTCCTGAGATGGCACAGTTCTAACCTGGGGAAAAAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520193.1
3UTR-3UTR CAA 90 bp CTAAACAAAGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGTGTCAAACGTGGTGCTaGCGCTGGGCACCACCTTTA +
Preference number: 3 (lower is better)
Translates to: LNKEPMSLITSVYLFPGLCQTWC*RWAPPL
Trigger: TAAAGGTGGTGCCCAGCGCAAGCACCACGTTTGACA...CAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCTTTGTTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520193.1
3UTR TCA 72 bp GTTCTTGGTTCTTGTCCTGGCAAGGTAGCATCTCAGTaGAGCAGACTTTTGGATTCACTCTGTGGTATGGTT +
Preference number: 3 (lower is better)
Translates to: VLGSCPGKVASQ*SRLLDSLCGMV
Trigger: AACCATACCACAGAGTGAATCCAAAAGTCTGCTTCACTGAGATGCTACCTTGCCAGGACAAGAACCAAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520193.1
3UTR TCA 72 bp AACATCAGGCATACCAAGGACATGGCCCAGCTCATGTaGCATCACTCCTACAAGAGCCACATTATTCTTTTT +
Preference number: 3 (lower is better)
Translates to: NIRHTKDMAQLM*HHSYKSHIILF
Trigger: AAAAAGAATAATGTGGCTCTTGTAGGAGTGATGTCACATGAGCTGGGCCATGTCCTTGGTATGCCTGATGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520193.1
3UTR-3UTR CAA 90 bp GAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATAACAATAAGTCCCACACGTCGATaGTTGAAGCTAATCCCGCTG +
Preference number: 3 (lower is better)
Translates to: EPMSLITSVYLFPGLITISPTRR*LKLIPL
Trigger: CAGCGGGATTAGCTTCAACAATCGACGTGTGGGACT...TATTGTTATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520193.1
3UTR-3UTR CAA 90 bp AGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATAACAATGGACAGTTAGAGTTCTaGGTTCTTGTCCTGGCAAGG +
Preference number: 3 (lower is better)
Translates to: RANVSNYICLPVSWTDNNGQLEF*VLVLAR
Trigger: CCTTGCCAGGACAAGAACCAAGAACTCTAACTGTCC...ATTGTTATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
3UTR-3UTR CAA 90 bp AACAAAGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATAGGACAGTTAGAGTTCTaGGTTCTTGTCCTGGCAAGG +
Preference number: 3 (lower is better)
Translates to: NKEPMSLITSVYLFPGLIGQLEF*VLVLAR
Trigger: CCTTGCCAGGACAAGAACCAAGAACTCTAACTGTCC...TATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCTTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
3UTR-3UTR CAA 90 bp GAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATAACAATAGATTCGAATTGGGCCTaGTTTCCCGTCAGTGCTCTT +
Preference number: 3 (lower is better)
Translates to: EPMSLITSVYLFPGLITIDSNWA*FPVSAL
Trigger: AAGAGCACTGACGGGAAACAAGGCCCAATTCGAATC...TATTGTTATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520193.1
3UTR-3UTR CAA 90 bp ATTAGGCCTAAACAAAGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCGAAGACTGCTTTCTTTaGTTCTCCAAAGGGCAGAAC +
Preference number: 3 (lower is better)
Translates to: IRPKQRANVSNYICLPVSEDCFL*FSKGQN
Trigger: GTTCTGCCCTTTGGAGAACAAAAGAAAGCAGTCTTC...GGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCTTTGTTTAGGCCTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
3UTR TCA 72 bp ACTCTGAATAGTTTAGCCGTGCATTTTAAGGTGATTTaGTGGAAGACTGCTTTCTTTTGTTCTCCAAAGGGC +
Preference number: 3 (lower is better)
Translates to: TLNSLAVHFKVI*WKTAFFCSPKG
Trigger: GCCCTTTGGAGAACAAAAGAAAGCAGTCTTCCATCAAATCACCTTAAAATGCACGGCTAAACTATTCAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CCA 90 bp TTGTCAAACGTGGTGCTTGCGCTGGGCACCACCTTTATCTTATCCCCATCAGACGGACCCAAGACATGGTaGCCACTGCAGGTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LSNVVLALGTTFILSPSDGPKTW*PLQVAG
Trigger: CCCAGCTACCTGCAGTGGCCACCATGTCTTGGGTCC...GTCTGATGGGGATAAGATAAAGGTGGTGCCCAGCGCAAGCACCACGTTTGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520193.1
CDS-3UTR TCA 90 bp TTGTCAAACGTGGTGCTTGCGCTGGGCACCACCTTTATCTTATCCCCATCAGACATCCCGCTGAGAAGCTaGGCATGGTCGTGGATCTTT +
Preference number: 4 (lower is better)
Translates to: LSNVVLALGTTFILSPSDIPLRS*AWSWIF
Trigger: AAAGATCCACGACCATGCTCAGCTTCTCAGCGGGAT...GTCTGATGGGGATAAGATAAAGGTGGTGCCCAGCGCAAGCACCACGTTTGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520193.1
CDS-3UTR GCA 90 bp GCTGAGAAGCTGAGCATGGTCGTGGATCTTTTTCCCCAGGTTAGAACTGTGCCAGTCAAACGTGGTGCTTaGGCTGGGCACCACCTTTAT +
Preference number: 4 (lower is better)
Translates to: AEKLSMVVDLFPQVRTVPVKRGA*AGHHLY
Trigger: ATAAAGGTGGTGCCCAGCGCAAGCACCACGTTTGAC...TGGCACAGTTCTAACCTGGGGAAAAAGATCCACGACCATGCTCAGCTTCTCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520193.1
CDS-3UTR CCA 90 bp AGTTCTTGGTTCTTGTCCTGGCAAGGTAGCATCTCAGTGAAGCAGACTTTTGGAGCCACTGCAGGTAGCTaGGAGATCCCACGCAGCATG +
Preference number: 4 (lower is better)
Translates to: SSWFLSWQGSISVKQTFGATAGS*EIPRSM
Trigger: CATGCTGCGTGGGATCTCCCAGCTACCTGCAGTGGC...TCCAAAAGTCTGCTTCACTGAGATGCTACCTTGCCAGGACAAGAACCAAGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256412.8
ENST00000522298.1
CDS-3UTR CCA 90 bp CCAGAGGGACACTTGGTGTTGAATGGAACATCAGGCATACCAAGGACATGGCCCACGTGGTGCTTGCGCTaGGCACCACCTTTATCTTAT +
Preference number: 4 (lower is better)
Translates to: PEGHLVLNGTSGIPRTWPTWCLR*APPLSY
Trigger: ATAAGATAAAGGTGGTGCCCAGCGCAAGCACCACGT...GGGCCATGTCCTTGGTATGCCTGATGTTCCATTCAACACCAAGTGTCCCTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520193.1
CDS-3UTR CCA 90 bp CTCCGCAATCAGTTCCAGGCTTCAGTTTACACGTTAGGGCTTCACAGCAGAGATGGCATACCAAGGACATaGCCCAGCTCATGTGACATC +
Preference number: 4 (lower is better)
Translates to: LRNQFQASVYTLGLHSRDGIPRT*PSSCDI
Trigger: GATGTCACATGAGCTGGGCCATGTCCTTGGTATGCC...ATCTCTGCTGTGAAGCCCTAACGTGTAAACTGAAGCCTGGAACTGATTGCGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520193.1
CDS-3UTR CCA 90 bp ACGTGGTGCTTGCGCTGGGCACCACCTTTATCTTATCCCCATCAGACCAGATTTCCCACTTCTAGAAGGTaGTTCCCACACACTGGTGTT +
Preference number: 4 (lower is better)
Translates to: TWCLRWAPPLSYPHQTRFPTSRR*FPHTGV
Trigger: AACACCAGTGTGTGGGAACCACCTTCTAGAAGTGGG...AAATCTGGTCTGATGGGGATAAGATAAAGGTGGTGCCCAGCGCAAGCACCACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520193.1
3UTR CAA 72 bp AACTGTGCCATCTCAGGAAGTTGTCAAACGTGGTGCTaGCGCTGGGCACCACCTTTATCTTATCCCCATCAG +
Preference number: 4 (lower is better)
Translates to: NCAISGSCQTWC*RWAPPLSYPHQ
Trigger: CTGATGGGGATAAGATAAAGGTGGTGCCCAGCGCAAGCACCACGTTTGACAACTTCCTGAGATGGCACAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520193.1
CDS-3UTR CCA 90 bp ACGTGGTGCTTGCGCTGGGCACCACCTTTATCTTATCCCCATCAGACCAGATTTGGGTCTTGTTCCTCCTaGTTAGATGTAAAGACGGCA +
Preference number: 4 (lower is better)
Translates to: TWCLRWAPPLSYPHQTRFGSCSS*LDVKTA
Trigger: TGCCGTCTTTACATCTAACCAGGAGGAACAAGACCC...AAATCTGGTCTGATGGGGATAAGATAAAGGTGGTGCCCAGCGCAAGCACCACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520193.1
CDS-3UTR CCA 90 bp ACGTGGTGCTTGCGCTGGGCACCACCTTTATCTTATCCCCATCAGACCAGATTTTTCACACCACATGTGTaGTTAGCTGGGTCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: TWCLRWAPPLSYPHQTRFFTPHV*LAGSCS
Trigger: GGAACAAGACCCAGCTAACCACACATGTGGTGTGAA...AAATCTGGTCTGATGGGGATAAGATAAAGGTGGTGCCCAGCGCAAGCACCACGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520193.1
CDS-3UTR CCA 90 bp ATCTTTTTCCCCAGGTTAGAACTGTGCCATCTCAGGAAGTTGTCAAACGTGGTGGGAAGTTGTCAAACGTaGTGCTTGCGCTGGGCACCA +
Preference number: 4 (lower is better)
Translates to: IFFPRLELCHLRKLSNVVGSCQT*CLRWAP
Trigger: TGGTGCCCAGCGCAAGCACCACGTTTGACAACTTCC...CACCACGTTTGACAACTTCCTGAGATGGCACAGTTCTAACCTGGGGAAAAAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520193.1
CDS-3UTR TCA 90 bp CTCCTCCGCAATCAGTTCCAGGCTTCAGTTTACACGTTAGGGCTTCACAGCAGATTTGGTGATGATGTGTaGAGTATCCTCTCAACCCGT +
Preference number: 4 (lower is better)
Translates to: LLRNQFQASVYTLGLHSRFGDDV*SILSTR
Trigger: ACGGGTTGAGAGGATACTTCACACATCATCACCAAA...TCTGCTGTGAAGCCCTAACGTGTAAACTGAAGCCTGGAACTGATTGCGGAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520193.1
CDS-3UTR TCA 90 bp AGTTCTTGGTTCTTGTCCTGGCAAGGTAGCATCTCAGTGAAGCAGACTTTTGGAGGAACACAAGGAATTTaGAGCTGCCAGTCCCACACG +
Preference number: 4 (lower is better)
Translates to: SSWFLSWQGSISVKQTFGGTQGI*SCQSHT
Trigger: CGTGTGGGACTGGCAGCTTCAAATTCCTTGTGTTCC...TCCAAAAGTCTGCTTCACTGAGATGCTACCTTGCCAGGACAAGAACCAAGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR GCA 90 bp ACCACATGTGTGGTTAGCTGGGTCTTGTTCCTCCTGGTTAGATGTAAAGACGGCCTTGTTTCCCGTCAGTaGTCTTCACACCACATGTGT +
Preference number: 4 (lower is better)
Translates to: TTCVVSWVLFLLVRCKDGLVSRQ*SSHHMC
Trigger: ACACATGTGGTGTGAAGAGCACTGACGGGAAACAAG...GCCGTCTTTACATCTAACCAGGAGGAACAAGACCCAGCTAACCACACATGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520193.1
CDS-3UTR CCA 90 bp AAGATTCCTGGGACAGTTAGAGTTCTTGGTTCTTGTCCTGGCAAGGTAGCATCTTGTTTCAGTGTAGTCTaGCCCCAGGAGGTGCTTGGT +
Preference number: 4 (lower is better)
Translates to: KIPGTVRVLGSCPGKVASCFSVV*PQEVLG
Trigger: ACCAAGCACCTCCTGGGGCCAGACTACACTGAAACA...AGATGCTACCTTGCCAGGACAAGAACCAAGAACTCTAACTGTCCCAGGAATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CCA 90 bp TTGTCAAACGTGGTGCTTGCGCTGGGCACCACCTTTATCTTATCCCCATCAGACTCTAGAGATTCGAATTaGGCCTTGTTTCCCGTCAGT +
Preference number: 4 (lower is better)
Translates to: LSNVVLALGTTFILSPSDSRDSN*ALFPVS
Trigger: ACTGACGGGAAACAAGGCCCAATTCGAATCTCTAGA...GTCTGATGGGGATAAGATAAAGGTGGTGCCCAGCGCAAGCACCACGTTTGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520193.1
CDS-3UTR CCA 90 bp TCAGGCATACCAAGGACATGGCCCAGCTCATGTGACATCACTCCTACAAGAGCCTTTGGATTCACTCTGTaGTATGGTTTGGAGCATCTC +
Preference number: 4 (lower is better)
Translates to: SGIPRTWPSSCDITPTRAFGFTL*YGLEHL
Trigger: GAGATGCTCCAAACCATACCACAGAGTGAATCCAAA...GGCTCTTGTAGGAGTGATGTCACATGAGCTGGGCCATGTCCTTGGTATGCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520193.1
3UTR CAA 72 bp AGTGCTCTTCACACCACATGTGTGGTTAGCTGGGTCTaGTTCCTCCTGGTTAGATGTAAAGACGGCATGTTC +
Preference number: 4 (lower is better)
Translates to: SALHTTCVVSWV*FLLVRCKDGMF
Trigger: GAACATGCCGTCTTTACATCTAACCAGGAGGAACAAGACCCAGCTAACCACACATGTGGTGTGAAGAGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520193.1
CDS-3UTR TCA 90 bp CTGAGCATGGTCGTGGATCTTTTTCCCCAGGTTAGAACTGTGCCATCTCAGGAATTCCTCTCCTCTGGGTaGGTACAATGTTTCAGTGTA +
Preference number: 4 (lower is better)
Translates to: LSMVVDLFPQVRTVPSQEFLSSG*VQCFSV
Trigger: TACACTGAAACATTGTACTCACCCAGAGGAGAGGAA...TTCCTGAGATGGCACAGTTCTAACCTGGGGAAAAAGATCCACGACCATGCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520193.1
CDS-3UTR TCA 90 bp CTCTGGGTGAGTACAATGTTTCAGTGTAGTCTGGCCCCAGGAGGTGCTTGGTTTCCTACCAAGGCCACTTaGACATCTATGGTGTTATAT +
Preference number: 4 (lower is better)
Translates to: LWVSTMFQCSLAPGGAWFPTKAT*TSMVLY
Trigger: ATATAACACCATAGATGTTCAAGTGGCCTTGGTAGG...AAACCAAGCACCTCCTGGGGCCAGACTACACTGAAACATTGTACTCACCCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520193.1
CDS-3UTR TCA 90 bp CTCTGGGTGAGTACAATGTTTCAGTGTAGTCTGGCCCCAGGAGGTGCTTGGTTTAAGGTAGCATCTCAGTaGAGCAGACTTTTGGATTCA +
Preference number: 4 (lower is better)
Translates to: LWVSTMFQCSLAPGGAWFKVASQ*SRLLDS
Trigger: TGAATCCAAAAGTCTGCTTCACTGAGATGCTACCTT...AAACCAAGCACCTCCTGGGGCCAGACTACACTGAAACATTGTACTCACCCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520193.1
CDS-3UTR GCA 90 bp GCAGACTTTTGGATTCACTCTGTGGTATGGTTTGGAGCATCTCCTCCGCAATCAGATTCATCACACAACTaGCAGAGGGACACTTGGTGT +
Preference number: 4 (lower is better)
Translates to: ADFWIHSVVWFGASPPQSDSSHN*QRDTWC
Trigger: ACACCAAGTGTCCCTCTGGCAGTTGTGTGATGAATC...TGATTGCGGAGGAGATGCTCCAAACCATACCACAGAGTGAATCCAAAAGTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520193.1
CDS-3UTR TCA 90 bp AGTTCTTGGTTCTTGTCCTGGCAAGGTAGCATCTCAGTGAAGCAGACTTTTGGAACCCGTCACAAGTACTaGTGCTGGCAACAGAATTCT +
Preference number: 4 (lower is better)
Translates to: SSWFLSWQGSISVKQTFGTRHKY*CWQQNS
Trigger: AGAATTCTGTTGCCAGCATCAGTACTTGTGACGGGT...TCCAAAAGTCTGCTTCACTGAGATGCTACCTTGCCAGGACAAGAACCAAGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR TCA 90 bp ATCTTTTTCCCCAGGTTAGAACTGTGCCATCTCAGGAAGTTGTCAAACGTGGTGACCCGTCACAAGTACTaGTGCTGGCAACAGAATTCT +
Preference number: 4 (lower is better)
Translates to: IFFPRLELCHLRKLSNVVTRHKY*CWQQNS
Trigger: AGAATTCTGTTGCCAGCATCAGTACTTGTGACGGGT...CACCACGTTTGACAACTTCCTGAGATGGCACAGTTCTAACCTGGGGAAAAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520193.1
CDS-3UTR TCA 90 bp CTGAGCATGGTCGTGGATCTTTTTCCCCAGGTTAGAACTGTGCCATCTCAGGAACCGTGCATTTTAAGGTaGTTTGATGGAAGACTGCTT +
Preference number: 4 (lower is better)
Translates to: LSMVVDLFPQVRTVPSQEPCILR*FDGRLL
Trigger: AAGCAGTCTTCCATCAAATCACCTTAAAATGCACGG...TTCCTGAGATGGCACAGTTCTAACCTGGGGAAAAAGATCCACGACCATGCTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000520193.1
CDS-3UTR GCA 90 bp AAGATTCCTGGGACAGTTAGAGTTCTTGGTTCTTGTCCTGGCAAGGTAGCATCTGATTCATCACACAACTaGCAGAGGGACACTTGGTGT +
Preference number: 4 (lower is better)
Translates to: KIPGTVRVLGSCPGKVASDSSHN*QRDTWC
Trigger: ACACCAAGTGTCCCTCTGGCAGTTGTGTGATGAATC...AGATGCTACCTTGCCAGGACAAGAACCAAGAACTCTAACTGTCCCAGGAATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CCA 90 bp GAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATAACAATAGCCACTGCAGGTAGCTaGGAGATCCCACGCAGCATG +
Preference number: 4 (lower is better)
Translates to: EPMSLITSVYLFPGLITIATAGS*EIPRSM
Trigger: CATGCTGCGTGGGATCTCCCAGCTACCTGCAGTGGC...TATTGTTATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256412.8
ENST00000522298.1
CDS-3UTR CCA 90 bp ATTAGGCCTAAACAAAGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCGGACCCAAGACATGGTaGCCACTGCAGGTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: IRPKQRANVSNYICLPVSGPKTW*PLQVAG
Trigger: CCCAGCTACCTGCAGTGGCCACCATGTCTTGGGTCC...GGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCTTTGTTTAGGCCTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CCA 90 bp GAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATAACAATAGGACCCAAGACATGGTaGCCACTGCAGGTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: EPMSLITSVYLFPGLITIGPKTW*PLQVAG
Trigger: CCCAGCTACCTGCAGTGGCCACCATGTCTTGGGTCC...TATTGTTATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CCA 90 bp AGTTCTTGGTTCTTGTCCTGGCAAGGTAGCATCTCAGTGAAGCAGACTTTTGGATTCACACCACATGTGTaGTTAGCTGGGTCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: SSWFLSWQGSISVKQTFGFTPHV*LAGSCS
Trigger: GGAACAAGACCCAGCTAACCACACATGTGGTGTGAA...TCCAAAAGTCTGCTTCACTGAGATGCTACCTTGCCAGGACAAGAACCAAGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CCA 90 bp TTCTCAGGTTTCGTGGTAATTTCCTCTCCTCTGGGTGAGTACAATGTTTCAGTGCTCTGTGGTATGGTTTaGAGCATCTCCTCCGCAATC +
Preference number: 4 (lower is better)
Translates to: FSGFVVISSPLGEYNVSVLCGMV*SISSAI
Trigger: GATTGCGGAGGAGATGCTCCAAACCATACCACAGAG...CACTGAAACATTGTACTCACCCAGAGGAGAGGAAATTACCACGAAACCTGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520193.1
CDS-3UTR CCA 90 bp AAGATTCCTGGGACAGTTAGAGTTCTTGGTTCTTGTCCTGGCAAGGTAGCATCTATTCACTCTGTGGTATaGTTTGGAGCATCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: KIPGTVRVLGSCPGKVASIHSVV*FGASPP
Trigger: CGGAGGAGATGCTCCAAACCATACCACAGAGTGAAT...AGATGCTACCTTGCCAGGACAAGAACCAAGAACTCTAACTGTCCCAGGAATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR GCA 90 bp AAAGGCATTATCCAGCACCAAATAGAGATCAATGTATTTCTGTGCCCGAAGAAAAGTTGTCAAACGTGGTaGTTGCGCTGGGCACCACCT +
Preference number: 4 (lower is better)
Translates to: KGIIQHQIEINVFLCPKKSCQTW*LRWAPP
Trigger: AGGTGGTGCCCAGCGCAAGCACCACGTTTGACAACT...TTTCTTCGGGCACAGAAATACATTGATCTCTATTTGGTGCTGGATAATGCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520193.1
CDS-3UTR GCA 90 bp CTAAACAAAGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGAGTTGTCAAACGTGGTaGTTGCGCTGGGCACCACCT +
Preference number: 4 (lower is better)
Translates to: LNKEPMSLITSVYLFPGLSCQTW*LRWAPP
Trigger: AGGTGGTGCCCAGCGCAAGCACCACGTTTGACAACT...CAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCTTTGTTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR GCA 90 bp CTCCTCCGCAATCAGTTCCAGGCTTCAGTTTACACGTTAGGGCTTCACAGCAGAGTATCTTTCAAAATGTaGACGGCAAGATGTACTGAA +
Preference number: 4 (lower is better)
Translates to: LLRNQFQASVYTLGLHSRVSFKM*TARCTE
Trigger: TTCAGTACATCTTGCCGTGCACATTTTGAAAGATAC...TCTGCTGTGAAGCCCTAACGTGTAAACTGAAGCCTGGAACTGATTGCGGAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520193.1
CDS-3UTR TCA 90 bp AGTTCTTGGTTCTTGTCCTGGCAAGGTAGCATCTCAGTGAAGCAGACTTTTGGAGCAGTGTCAACATCATaGGAATGTTCCTCATCTTTG +
Preference number: 4 (lower is better)
Translates to: SSWFLSWQGSISVKQTFGAVSTS*ECSSSL
Trigger: CAAAGATGAGGAACATTCTCATGATGTTGACACTGC...TCCAAAAGTCTGCTTCACTGAGATGCTACCTTGCCAGGACAAGAACCAAGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256412.8
CDS-3UTR TCA 90 bp AGTTCTTGGTTCTTGTCCTGGCAAGGTAGCATCTCAGTGAAGCAGACTTTTGGACCTACCAAGGCCACTTaGACATCTATGGTGTTATAT +
Preference number: 4 (lower is better)
Translates to: SSWFLSWQGSISVKQTFGPTKAT*TSMVLY
Trigger: ATATAACACCATAGATGTTCAAGTGGCCTTGGTAGG...TCCAAAAGTCTGCTTCACTGAGATGCTACCTTGCCAGGACAAGAACCAAGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR TCA 90 bp CTAAACAAAGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGGGAACACAAGGAATTTaGAGCTGCCAGTCCCACACG +
Preference number: 4 (lower is better)
Translates to: LNKEPMSLITSVYLFPGLGTQGI*SCQSHT
Trigger: CGTGTGGGACTGGCAGCTTCAAATTCCTTGTGTTCC...CAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCTTTGTTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR TCA 90 bp AGTTCTTGGTTCTTGTCCTGGCAAGGTAGCATCTCAGTGAAGCAGACTTTTGGAAAGGTAGCATCTCAGTaGAGCAGACTTTTGGATTCA +
Preference number: 4 (lower is better)
Translates to: SSWFLSWQGSISVKQTFGKVASQ*SRLLDS
Trigger: TGAATCCAAAAGTCTGCTTCACTGAGATGCTACCTT...TCCAAAAGTCTGCTTCACTGAGATGCTACCTTGCCAGGACAAGAACCAAGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR TCA 90 bp CTCCGCAATCAGTTCCAGGCTTCAGTTTACACGTTAGGGCTTCACAGCAGAGATAAAGACCATTATGGGTaGAAATTCACAAGATTCCTG +
Preference number: 4 (lower is better)
Translates to: LRNQFQASVYTLGLHSRDKDHYG*KFTRFL
Trigger: CAGGAATCTTGTGAATTTTCACCCATAATGGTCTTT...ATCTCTGCTGTGAAGCCCTAACGTGTAAACTGAAGCCTGGAACTGATTGCGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520193.1
CDS-3UTR TCA 90 bp AGTTCTTGGTTCTTGTCCTGGCAAGGTAGCATCTCAGTGAAGCAGACTTTTGGACCGTGCATTTTAAGGTaGTTTGATGGAAGACTGCTT +
Preference number: 4 (lower is better)
Translates to: SSWFLSWQGSISVKQTFGPCILR*FDGRLL
Trigger: AAGCAGTCTTCCATCAAATCACCTTAAAATGCACGG...TCCAAAAGTCTGCTTCACTGAGATGCTACCTTGCCAGGACAAGAACCAAGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR GCA 90 bp GAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATAACAATAAGTTGTCAAACGTGGTaGTTGCGCTGGGCACCACCT +
Preference number: 4 (lower is better)
Translates to: EPMSLITSVYLFPGLITISCQTW*LRWAPP
Trigger: AGGTGGTGCCCAGCGCAAGCACCACGTTTGACAACT...TATTGTTATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR GCA 90 bp CTCTGGGTGAGTACAATGTTTCAGTGTAGTCTGGCCCCAGGAGGTGCTTGGTTTGATTTGATGGAAGACTaGTTTCTTTTGTTCTCCAAA +
Preference number: 4 (lower is better)
Translates to: LWVSTMFQCSLAPGGAWFDLMED*FLLFSK
Trigger: TTTGGAGAACAAAAGAAAGCAGTCTTCCATCAAATC...AAACCAAGCACCTCCTGGGGCCAGACTACACTGAAACATTGTACTCACCCAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520193.1
CDS-3UTR CCA 90 bp TATCTGGTATCTTTGGTGATGATGTGTGAAGTATCCTCTCAACCCGTCACAAGTACATGTGTGGTTAGCTaGGTCTTGTTCCTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: YLVSLVMMCEVSSQPVTSTCVVS*VLFLLV
Trigger: AACCAGGAGGAACAAGACCCAGCTAACCACACATGT...ACTTGTGACGGGTTGAGAGGATACTTCACACATCATCACCAAAGATACCAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520193.1
CDS-3UTR CCA 90 bp GAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATAACAATAGGAAGTTGTCAAACGTaGTGCTTGCGCTGGGCACCA +
Preference number: 4 (lower is better)
Translates to: EPMSLITSVYLFPGLITIGSCQT*CLRWAP
Trigger: TGGTGCCCAGCGCAAGCACCACGTTTGACAACTTCC...TATTGTTATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR TCA 90 bp GAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATAACAATAATCCCGCTGAGAAGCTaGGCATGGTCGTGGATCTTT +
Preference number: 4 (lower is better)
Translates to: EPMSLITSVYLFPGLITIIPLRS*AWSWIF
Trigger: AAAGATCCACGACCATGCTCAGCTTCTCAGCGGGAT...TATTGTTATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR TCA 90 bp ATTAGGCCTAAACAAAGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCATCCCGCTGAGAAGCTaGGCATGGTCGTGGATCTTT +
Preference number: 4 (lower is better)
Translates to: IRPKQRANVSNYICLPVSIPLRS*AWSWIF
Trigger: AAAGATCCACGACCATGCTCAGCTTCTCAGCGGGAT...GGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCTTTGTTTAGGCCTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CCA 90 bp AGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATAACAATTGTTTCAGTGTAGTCTaGCCCCAGGAGGTGCTTGGT +
Preference number: 4 (lower is better)
Translates to: RANVSNYICLPVSWTDNNCFSVV*PQEVLG
Trigger: ACCAAGCACCTCCTGGGGCCAGACTACACTGAAACA...ATTGTTATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CCA 90 bp AACAATTCTGGAGTGTTAACTCTGAATAGTTTAGCCGTGCATTTTAAGGTGATTGGAAGTTGTCAAACGTaGTGCTTGCGCTGGGCACCA +
Preference number: 4 (lower is better)
Translates to: NNSGVLTLNSLAVHFKVIGSCQT*CLRWAP
Trigger: TGGTGCCCAGCGCAAGCACCACGTTTGACAACTTCC...AATCACCTTAAAATGCACGGCTAAACTATTCAGAGTTAACACTCCAGAATTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CCA 90 bp GAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATAACAATAGGCATACCAAGGACATaGCCCAGCTCATGTGACATC +
Preference number: 4 (lower is better)
Translates to: EPMSLITSVYLFPGLITIGIPRT*PSSCDI
Trigger: GATGTCACATGAGCTGGGCCATGTCCTTGGTATGCC...TATTGTTATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CCA 90 bp AGTTCTTGGTTCTTGTCCTGGCAAGGTAGCATCTCAGTGAAGCAGACTTTTGGAGTGGTTCCCACACACTaGTGTTGTCATTATATTTGT +
Preference number: 4 (lower is better)
Translates to: SSWFLSWQGSISVKQTFGVVPTH*CCHYIC
Trigger: ACAAATATAATGACAACACCAGTGTGTGGGAACCAC...TCCAAAAGTCTGCTTCACTGAGATGCTACCTTGCCAGGACAAGAACCAAGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CCA 90 bp CTAAACAAAGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGCCCACTTCTAGAAGGTaGTTCCCACACACTGGTGTT +
Preference number: 4 (lower is better)
Translates to: LNKEPMSLITSVYLFPGLPTSRR*FPHTGV
Trigger: AACACCAGTGTGTGGGAACCACCTTCTAGAAGTGGG...CAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCTTTGTTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CCA 90 bp TTCTCAGGTTTCGTGGTAATTTCCTCTCCTCTGGGTGAGTACAATGTTTCAGTGAGTGAAGCAGACTTTTaGATTCACTCTGTGGTATGG +
Preference number: 4 (lower is better)
Translates to: FSGFVVISSPLGEYNVSVSEADF*IHSVVW
Trigger: CCATACCACAGAGTGAATCCAAAAGTCTGCTTCACT...CACTGAAACATTGTACTCACCCAGAGGAGAGGAAATTACCACGAAACCTGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520193.1
CDS-3UTR TCA 90 bp TATCTGGTATCTTTGGTGATGATGTGTGAAGTATCCTCTCAACCCGTCACAAGTCACGGCAAGATGTACTaGAATCCTTTGGGAATTTTG +
Preference number: 4 (lower is better)
Translates to: YLVSLVMMCEVSSQPVTSHGKMY*NPLGIL
Trigger: CAAAATTCCCAAAGGATTTCAGTACATCTTGCCGTG...ACTTGTGACGGGTTGAGAGGATACTTCACACATCATCACCAAAGATACCAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520193.1
CDS-3UTR TCA 90 bp AAGATTCCTGGGACAGTTAGAGTTCTTGGTTCTTGTCCTGGCAAGGTAGCATCTAAAGACCATTATGGGTaGAAATTCACAAGATTCCTG +
Preference number: 4 (lower is better)
Translates to: KIPGTVRVLGSCPGKVASKDHYG*KFTRFL
Trigger: CAGGAATCTTGTGAATTTTCACCCATAATGGTCTTT...AGATGCTACCTTGCCAGGACAAGAACCAAGAACTCTAACTGTCCCAGGAATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR GCA 90 bp CTAAACAAAGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGCTTGTTTCCCGTCAGTaGTCTTCACACCACATGTGT +
Preference number: 4 (lower is better)
Translates to: LNKEPMSLITSVYLFPGLLVSRQ*SSHHMC
Trigger: ACACATGTGGTGTGAAGAGCACTGACGGGAAACAAG...CAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCTTTGTTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR GCA 90 bp AACAATTCTGGAGTGTTAACTCTGAATAGTTTAGCCGTGCATTTTAAGGTGATTGTCAAACGTGGTGCTTaGGCTGGGCACCACCTTTAT +
Preference number: 4 (lower is better)
Translates to: NNSGVLTLNSLAVHFKVIVKRGA*AGHHLY
Trigger: ATAAAGGTGGTGCCCAGCGCAAGCACCACGTTTGAC...AATCACCTTAAAATGCACGGCTAAACTATTCAGAGTTAACACTCCAGAATTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR GCA 90 bp CTAAACAAAGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGCCCAGGTTAGAACTGTaGCATCTCAGGAAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: LNKEPMSLITSVYLFPGLPRLEL*HLRKLS
Trigger: TGACAACTTCCTGAGATGGCACAGTTCTAACCTGGG...CAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCTTTGTTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR GCA 90 bp AAGATTCCTGGGACAGTTAGAGTTCTTGGTTCTTGTCCTGGCAAGGTAGCATCTGTATCTTTCAAAATGTaGACGGCAAGATGTACTGAA +
Preference number: 4 (lower is better)
Translates to: KIPGTVRVLGSCPGKVASVSFKM*TARCTE
Trigger: TTCAGTACATCTTGCCGTGCACATTTTGAAAGATAC...AGATGCTACCTTGCCAGGACAAGAACCAAGAACTCTAACTGTCCCAGGAATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR GCA 90 bp GCAGACTTTTGGATTCACTCTGTGGTATGGTTTGGAGCATCTCCTCCGCAATCAGTTAATTCAGGTGTTTaGTTTATGGCTATTGCTTCT +
Preference number: 4 (lower is better)
Translates to: ADFWIHSVVWFGASPPQSVNSGV*FMAIAS
Trigger: AGAAGCAATAGCCATAAAGCAAACACCTGAATTAAC...TGATTGCGGAGGAGATGCTCCAAACCATACCACAGAGTGAATCCAAAAGTCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520193.1
CDS-3UTR CCA 90 bp AACAATTCTGGAGTGTTAACTCTGAATAGTTTAGCCGTGCATTTTAAGGTGATTTGTTTCAGTGTAGTCTaGCCCCAGGAGGTGCTTGGT +
Preference number: 4 (lower is better)
Translates to: NNSGVLTLNSLAVHFKVICFSVV*PQEVLG
Trigger: ACCAAGCACCTCCTGGGGCCAGACTACACTGAAACA...AATCACCTTAAAATGCACGGCTAAACTATTCAGAGTTAACACTCCAGAATTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CCA 90 bp ATTAGGCCTAAACAAAGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCACGTGGTGCTTGCGCTaGGCACCACCTTTATCTTAT +
Preference number: 4 (lower is better)
Translates to: IRPKQRANVSNYICLPVSTWCLR*APPLSY
Trigger: ATAAGATAAAGGTGGTGCCCAGCGCAAGCACCACGT...GGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCTTTGTTTAGGCCTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CCA 90 bp AACAATTCTGGAGTGTTAACTCTGAATAGTTTAGCCGTGCATTTTAAGGTGATTGGCATACCAAGGACATaGCCCAGCTCATGTGACATC +
Preference number: 4 (lower is better)
Translates to: NNSGVLTLNSLAVHFKVIGIPRT*PSSCDI
Trigger: GATGTCACATGAGCTGGGCCATGTCCTTGGTATGCC...AATCACCTTAAAATGCACGGCTAAACTATTCAGAGTTAACACTCCAGAATTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CCA 90 bp TATCTGGTATCTTTGGTGATGATGTGTGAAGTATCCTCTCAACCCGTCACAAGTACACTTGGTGTTGAATaGAACATCAGGCATACCAAG +
Preference number: 4 (lower is better)
Translates to: YLVSLVMMCEVSSQPVTSTLGVE*NIRHTK
Trigger: CTTGGTATGCCTGATGTTCCATTCAACACCAAGTGT...ACTTGTGACGGGTTGAGAGGATACTTCACACATCATCACCAAAGATACCAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520193.1
CDS-3UTR CCA 90 bp ATTAGGCCTAAACAAAGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCCTCTGTGGTATGGTTTaGAGCATCTCCTCCGCAATC +
Preference number: 4 (lower is better)
Translates to: IRPKQRANVSNYICLPVSLCGMV*SISSAI
Trigger: GATTGCGGAGGAGATGCTCCAAACCATACCACAGAG...GGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCTTTGTTTAGGCCTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CCA 90 bp AGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATAACAATCTCTGTGGTATGGTTTaGAGCATCTCCTCCGCAATC +
Preference number: 4 (lower is better)
Translates to: RANVSNYICLPVSWTDNNLCGMV*SISSAI
Trigger: GATTGCGGAGGAGATGCTCCAAACCATACCACAGAG...ATTGTTATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR TCA 90 bp AGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATAACAATACCCGTCACAAGTACTaGTGCTGGCAACAGAATTCT +
Preference number: 4 (lower is better)
Translates to: RANVSNYICLPVSWTDNNTRHKY*CWQQNS
Trigger: AGAATTCTGTTGCCAGCATCAGTACTTGTGACGGGT...ATTGTTATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR TCA 90 bp GAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATAACAATAAGGGACACTTGGTGTTaGATGGAACATCAGGCATAC +
Preference number: 4 (lower is better)
Translates to: EPMSLITSVYLFPGLITIRDTWC*MEHQAY
Trigger: GTATGCCTGATGTTCCATTCAACACCAAGTGTCCCT...TATTGTTATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR TCA 90 bp AGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATAACAATAGGGACACTTGGTGTTaGATGGAACATCAGGCATAC +
Preference number: 4 (lower is better)
Translates to: RANVSNYICLPVSWTDNNRDTWC*MEHQAY
Trigger: GTATGCCTGATGTTCCATTCAACACCAAGTGTCCCT...ATTGTTATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR TCA 90 bp ATTAGGCCTAAACAAAGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCAGGCCACGCACAGTTTaGGGCTTGAGTTTGAACAAT +
Preference number: 4 (lower is better)
Translates to: IRPKQRANVSNYICLPVSRPRTV*GLSLNN
Trigger: ATTGTTCAAACTCAAGCCTCAAACTGTGCGTGGCCT...GGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCTTTGTTTAGGCCTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520193.1
CDS-3UTR GCA 90 bp AGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATAACAATCCCAGGTTAGAACTGTaGCATCTCAGGAAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: RANVSNYICLPVSWTDNNPRLEL*HLRKLS
Trigger: TGACAACTTCCTGAGATGGCACAGTTCTAACCTGGG...ATTGTTATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR GCA 90 bp GAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATAACAATAGATTCATCACACAACTaGCAGAGGGACACTTGGTGT +
Preference number: 4 (lower is better)
Translates to: EPMSLITSVYLFPGLITIDSSHN*QRDTWC
Trigger: ACACCAAGTGTCCCTCTGGCAGTTGTGTGATGAATC...TATTGTTATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR GCA 90 bp AGTTCTTGGTTCTTGTCCTGGCAAGGTAGCATCTCAGTGAAGCAGACTTTTGGAGATTTGATGGAAGACTaGTTTCTTTTGTTCTCCAAA +
Preference number: 4 (lower is better)
Translates to: SSWFLSWQGSISVKQTFGDLMED*FLLFSK
Trigger: TTTGGAGAACAAAAGAAAGCAGTCTTCCATCAAATC...TCCAAAAGTCTGCTTCACTGAGATGCTACCTTGCCAGGACAAGAACCAAGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CCA 90 bp GAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATAACAATAGGGTCTTGTTCCTCCTaGTTAGATGTAAAGACGGCA +
Preference number: 4 (lower is better)
Translates to: EPMSLITSVYLFPGLITIGSCSS*LDVKTA
Trigger: TGCCGTCTTTACATCTAACCAGGAGGAACAAGACCC...TATTGTTATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CCA 90 bp AGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATAACAATGGGTCTTGTTCCTCCTaGTTAGATGTAAAGACGGCA +
Preference number: 4 (lower is better)
Translates to: RANVSNYICLPVSWTDNNGSCSS*LDVKTA
Trigger: TGCCGTCTTTACATCTAACCAGGAGGAACAAGACCC...ATTGTTATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CCA 90 bp AACAAAGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATAACATGTGTGGTTAGCTaGGTCTTGTTCCTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: NKEPMSLITSVYLFPGLITCVVS*VLFLLV
Trigger: AACCAGGAGGAACAAGACCCAGCTAACCACACATGT...TATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCTTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CCA 90 bp GAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATAACAATAACATGTGTGGTTAGCTaGGTCTTGTTCCTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: EPMSLITSVYLFPGLITITCVVS*VLFLLV
Trigger: AACCAGGAGGAACAAGACCCAGCTAACCACACATGT...TATTGTTATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CCA 90 bp AACAAAGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATATTCACACCACATGTGTaGTTAGCTGGGTCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: NKEPMSLITSVYLFPGLIFTPHV*LAGSCS
Trigger: GGAACAAGACCCAGCTAACCACACATGTGGTGTGAA...TATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCTTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CCA 90 bp AACAATTCTGGAGTGTTAACTCTGAATAGTTTAGCCGTGCATTTTAAGGTGATTACGTGGTGCTTGCGCTaGGCACCACCTTTATCTTAT +
Preference number: 4 (lower is better)
Translates to: NNSGVLTLNSLAVHFKVITWCLR*APPLSY
Trigger: ATAAGATAAAGGTGGTGCCCAGCGCAAGCACCACGT...AATCACCTTAAAATGCACGGCTAAACTATTCAGAGTTAACACTCCAGAATTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CCA 90 bp AACAAAGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATAATTCACTCTGTGGTATaGTTTGGAGCATCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: NKEPMSLITSVYLFPGLIIHSVV*FGASPP
Trigger: CGGAGGAGATGCTCCAAACCATACCACAGAGTGAAT...TATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCTTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CCA 90 bp GAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATAACAATAATTCACTCTGTGGTATaGTTTGGAGCATCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: EPMSLITSVYLFPGLITIIHSVV*FGASPP
Trigger: CGGAGGAGATGCTCCAAACCATACCACAGAGTGAAT...TATTGTTATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR TCA 90 bp AACAAAGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATACTTGAGTTTGAACAATaGGCCAAAGTACAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: NKEPMSLITSVYLFPGLILEFEQ*AKVQAA
Trigger: TGCTGCCTGTACTTTGGCTCATTGTTCAAACTCAAG...TATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCTTTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR TCA 90 bp AACAAAGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATATTCCTCTCCTCTGGGTaGGTACAATGTTTCAGTGTA +
Preference number: 4 (lower is better)
Translates to: NKEPMSLITSVYLFPGLIFLSSG*VQCFSV
Trigger: TACACTGAAACATTGTACTCACCCAGAGGAGAGGAA...TATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCTTTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR TCA 90 bp ATTAGGCCTAAACAAAGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTTCCTCTCCTCTGGGTaGGTACAATGTTTCAGTGTA +
Preference number: 4 (lower is better)
Translates to: IRPKQRANVSNYICLPVSFLSSG*VQCFSV
Trigger: TACACTGAAACATTGTACTCACCCAGAGGAGAGGAA...GGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCTTTGTTTAGGCCTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR TCA 90 bp AACAAAGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATATTTGGTGATGATGTGTaGAGTATCCTCTCAACCCGT +
Preference number: 4 (lower is better)
Translates to: NKEPMSLITSVYLFPGLIFGDDV*SILSTR
Trigger: ACGGGTTGAGAGGATACTTCACACATCATCACCAAA...TATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCTTTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR TCA 90 bp CTAAACAAAGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGCCTACCAAGGCCACTTaGACATCTATGGTGTTATAT +
Preference number: 4 (lower is better)
Translates to: LNKEPMSLITSVYLFPGLPTKAT*TSMVLY
Trigger: ATATAACACCATAGATGTTCAAGTGGCCTTGGTAGG...CAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCTTTGTTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR GCA 90 bp AGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATAACAATATTTGTAGGAATAGGTaGTTGCAGCAGGCACTTTGG +
Preference number: 4 (lower is better)
Translates to: RANVSNYICLPVSWTDNNICRNR*LQQALW
Trigger: CCAAAGTGCCTGCTGCAAGCACCTATTCCTACAAAT...ATTGTTATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CCA 90 bp TATCTGGTATCTTTGGTGATGATGTGTGAAGTATCCTCTCAACCCGTCACAAGTGGACAAACTATTTCATaGAGCGTTAATTCAGGTGTT +
Preference number: 4 (lower is better)
Translates to: YLVSLVMMCEVSSQPVTSGQTIS*SVNSGV
Trigger: AACACCTGAATTAACGCTCCATGAAATAGTTTGTCC...ACTTGTGACGGGTTGAGAGGATACTTCACACATCATCACCAAAGATACCAGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520193.1
CDS-3UTR CCA 90 bp ATTAGGCCTAAACAAAGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTCTAGAGATTCGAATTaGGCCTTGTTTCCCGTCAGT +
Preference number: 4 (lower is better)
Translates to: IRPKQRANVSNYICLPVSSRDSN*ALFPVS
Trigger: ACTGACGGGAAACAAGGCCCAATTCGAATCTCTAGA...GGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCTTTGTTTAGGCCTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR TCA 90 bp AACAATTCTGGAGTGTTAACTCTGAATAGTTTAGCCGTGCATTTTAAGGTGATTCTTGAGTTTGAACAATaGGCCAAAGTACAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: NNSGVLTLNSLAVHFKVILEFEQ*AKVQAA
Trigger: TGCTGCCTGTACTTTGGCTCATTGTTCAAACTCAAG...AATCACCTTAAAATGCACGGCTAAACTATTCAGAGTTAACACTCCAGAATTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR TCA 90 bp CTAAACAAAGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGTTTGAACTCAGATACTaGTTCATCACACAACTGCCA +
Preference number: 4 (lower is better)
Translates to: LNKEPMSLITSVYLFPGLFELRY*FITQLP
Trigger: TGGCAGTTGTGTGATGAATCAGTATCTGAGTTCAAA...CAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCTTTGTTTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR TCA 90 bp GAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATAACAATACACGGCAAGATGTACTaGAATCCTTTGGGAATTTTG +
Preference number: 4 (lower is better)
Translates to: EPMSLITSVYLFPGLITIHGKMY*NPLGIL
Trigger: CAAAATTCCCAAAGGATTTCAGTACATCTTGCCGTG...TATTGTTATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR TCA 90 bp AGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATAACAATCACGGCAAGATGTACTaGAATCCTTTGGGAATTTTG +
Preference number: 4 (lower is better)
Translates to: RANVSNYICLPVSWTDNNHGKMY*NPLGIL
Trigger: CAAAATTCCCAAAGGATTTCAGTACATCTTGCCGTG...ATTGTTATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR GCA 90 bp AACAATTCTGGAGTGTTAACTCTGAATAGTTTAGCCGTGCATTTTAAGGTGATTATTTGTAGGAATAGGTaGTTGCAGCAGGCACTTTGG +
Preference number: 4 (lower is better)
Translates to: NNSGVLTLNSLAVHFKVIICRNR*LQQALW
Trigger: CCAAAGTGCCTGCTGCAAGCACCTATTCCTACAAAT...AATCACCTTAAAATGCACGGCTAAACTATTCAGAGTTAACACTCCAGAATTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CCA 90 bp AACAAAGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATAACACTTGGTGTTGAATaGAACATCAGGCATACCAAG +
Preference number: 4 (lower is better)
Translates to: NKEPMSLITSVYLFPGLITLGVE*NIRHTK
Trigger: CTTGGTATGCCTGATGTTCCATTCAACACCAAGTGT...TATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCTTTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CCA 90 bp GAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATAACAATAACACTTGGTGTTGAATaGAACATCAGGCATACCAAG +
Preference number: 4 (lower is better)
Translates to: EPMSLITSVYLFPGLITITLGVE*NIRHTK
Trigger: CTTGGTATGCCTGATGTTCCATTCAACACCAAGTGT...TATTGTTATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CCA 90 bp AACAAAGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATATTTGGATTCACTCTGTaGTATGGTTTGGAGCATCTC +
Preference number: 4 (lower is better)
Translates to: NKEPMSLITSVYLFPGLIFGFTL*YGLEHL
Trigger: GAGATGCTCCAAACCATACCACAGAGTGAATCCAAA...TATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCTTTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CCA 90 bp ATTAGGCCTAAACAAAGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTTTGGATTCACTCTGTaGTATGGTTTGGAGCATCTC +
Preference number: 4 (lower is better)
Translates to: IRPKQRANVSNYICLPVSFGFTL*YGLEHL
Trigger: GAGATGCTCCAAACCATACCACAGAGTGAATCCAAA...GGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCTTTGTTTAGGCCTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CCA 90 bp AGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATAACAATAGTGAAGCAGACTTTTaGATTCACTCTGTGGTATGG +
Preference number: 4 (lower is better)
Translates to: RANVSNYICLPVSWTDNNSEADF*IHSVVW
Trigger: CCATACCACAGAGTGAATCCAAAAGTCTGCTTCACT...ATTGTTATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CCA 90 bp ATTAGGCCTAAACAAAGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCAGTGAAGCAGACTTTTaGATTCACTCTGTGGTATGG +
Preference number: 4 (lower is better)
Translates to: IRPKQRANVSNYICLPVSSEADF*IHSVVW
Trigger: CCATACCACAGAGTGAATCCAAAAGTCTGCTTCACT...GGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCTTTGTTTAGGCCTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR TCA 90 bp ATTAGGCCTAAACAAAGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTTTGAACTCAGATACTaGTTCATCACACAACTGCCA +
Preference number: 4 (lower is better)
Translates to: IRPKQRANVSNYICLPVSFELRY*FITQLP
Trigger: TGGCAGTTGTGTGATGAATCAGTATCTGAGTTCAAA...GGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCTTTGTTTAGGCCTAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CCA 90 bp AACAAAGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATACCATGCTTTTCTGTCTaGTTGTTCTTGATCTCTCTT +
Preference number: 4 (lower is better)
Translates to: NKEPMSLITSVYLFPGLIPCFSV*LFLISL
Trigger: AAGAGAGATCAAGAACAACCAGACAGAAAAGCATGG...TATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCTTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256412.8
ENST00000520193.1
CDS-3UTR CCA 90 bp ATTAGGCCTAAACAAAGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCCCATGCTTTTCTGTCTaGTTGTTCTTGATCTCTCTT +
Preference number: 4 (lower is better)
Translates to: IRPKQRANVSNYICLPVSPCFSV*LFLISL
Trigger: AAGAGAGATCAAGAACAACCAGACAGAAAAGCATGG...GGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCTTTGTTTAGGCCTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256412.8
ENST00000520193.1
CDS-3UTR CCA 90 bp AGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATAACAATGTGGTTCCCACACACTaGTGTTGTCATTATATTTGT +
Preference number: 4 (lower is better)
Translates to: RANVSNYICLPVSWTDNNVVPTH*CCHYIC
Trigger: ACAAATATAATGACAACACCAGTGTGTGGGAACCAC...ATTGTTATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CCA 90 bp ATTAGGCCTAAACAAAGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCGTGGTTCCCACACACTaGTGTTGTCATTATATTTGT +
Preference number: 4 (lower is better)
Translates to: IRPKQRANVSNYICLPVSVVPTH*CCHYIC
Trigger: ACAAATATAATGACAACACCAGTGTGTGGGAACCAC...GGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCTTTGTTTAGGCCTAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR TCA 90 bp GAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATAACAATAAATGTTCCTCATCTTTaGGAGATATTTATGGCTGTG +
Preference number: 4 (lower is better)
Translates to: EPMSLITSVYLFPGLITINVPHL*EIFMAV
Trigger: CACAGCCATAAATATCTCTCAAAGATGAGGAACATT...TATTGTTATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256412.8
CDS-3UTR TCA 90 bp ATTAGGCCTAAACAAAGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCCTGTCTGGTTGTTCTTaGTCTCTCTTTTGTGTAAAA +
Preference number: 4 (lower is better)
Translates to: IRPKQRANVSNYICLPVSLSGCS*SLFCVK
Trigger: TTTTACACAAAAGAGAGATCAAGAACAACCAGACAG...GGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCTTTGTTTAGGCCTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256412.8
ENST00000520193.1
CDS-3UTR TCA 90 bp AACAATTCTGGAGTGTTAACTCTGAATAGTTTAGCCGTGCATTTTAAGGTGATTTTTGAACTCAGATACTaGTTCATCACACAACTGCCA +
Preference number: 4 (lower is better)
Translates to: NNSGVLTLNSLAVHFKVIFELRY*FITQLP
Trigger: TGGCAGTTGTGTGATGAATCAGTATCTGAGTTCAAA...AATCACCTTAAAATGCACGGCTAAACTATTCAGAGTTAACACTCCAGAATTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR TCA 90 bp AACAAAGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATAAAAGACCATTATGGGTaGAAATTCACAAGATTCCTG +
Preference number: 4 (lower is better)
Translates to: NKEPMSLITSVYLFPGLIKDHYG*KFTRFL
Trigger: CAGGAATCTTGTGAATTTTCACCCATAATGGTCTTT...TATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCTTTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR GCA 90 bp AGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATAACAATGTTCTTTCTCGTCTGTaGTTTTCAGAGGTTTTATCT +
Preference number: 4 (lower is better)
Translates to: RANVSNYICLPVSWTDNNVLSRL*FSEVLS
Trigger: AGATAAAACCTCTGAAAAGCACAGACGAGAAAGAAC...ATTGTTATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR GCA 90 bp AACAAAGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATAGTTCTTTCTCGTCTGTaGTTTTCAGAGGTTTTATCT +
Preference number: 4 (lower is better)
Translates to: NKEPMSLITSVYLFPGLIVLSRL*FSEVLS
Trigger: AGATAAAACCTCTGAAAAGCACAGACGAGAAAGAAC...TATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCTTTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR GCA 90 bp ATTAGGCCTAAACAAAGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCGTATCTTTCAAAATGTaGACGGCAAGATGTACTGAA +
Preference number: 4 (lower is better)
Translates to: IRPKQRANVSNYICLPVSVSFKM*TARCTE
Trigger: TTCAGTACATCTTGCCGTGCACATTTTGAAAGATAC...GGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCTTTGTTTAGGCCTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR GCA 90 bp CTAAACAAAGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGGATTTGATGGAAGACTaGTTTCTTTTGTTCTCCAAA +
Preference number: 4 (lower is better)
Translates to: LNKEPMSLITSVYLFPGLDLMED*FLLFSK
Trigger: TTTGGAGAACAAAAGAAAGCAGTCTTCCATCAAATC...CAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCTTTGTTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CCA 90 bp AGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATAACAATCAGGTGTTTGCTTTATaGCTATTGCTTGAGTTTGAA +
Preference number: 4 (lower is better)
Translates to: RANVSNYICLPVSWTDNNQVFAL*LLLEFE
Trigger: TTCAAACTCAAGCAATAGCCATAAAGCAAACACCTG...ATTGTTATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256412.8
CDS-3UTR GCA 90 bp AACAAAGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATATTGCTTTATGGCTATTaGTTGAGTTTGAACAATGAG +
Preference number: 4 (lower is better)
Translates to: NKEPMSLITSVYLFPGLILLYGY*LSLNNE
Trigger: CTCATTGTTCAAACTCAAGCAATAGCCATAAAGCAA...TATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCTTTGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256412.8
CDS-3UTR CCA 90 bp AACAATTCTGGAGTGTTAACTCTGAATAGTTTAGCCGTGCATTTTAAGGTGATTGGACAAACTATTTCATaGAGCGTTAATTCAGGTGTT +
Preference number: 4 (lower is better)
Translates to: NNSGVLTLNSLAVHFKVIGQTIS*SVNSGV
Trigger: AACACCTGAATTAACGCTCCATGAAATAGTTTGTCC...AATCACCTTAAAATGCACGGCTAAACTATTCAGAGTTAACACTCCAGAATTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256412.8
ENST00000520193.1
CDS-3UTR CAA 90 bp ACGTGGTGCTTGCGCTGGGCACCACCTTTATCTTATCCCCATCAGACCAGATTTTGTCAAACGTGGTGCTaGCGCTGGGCACCACCTTTA +
Preference number: 5 (lower is better)
Translates to: TWCLRWAPPLSYPHQTRFCQTWC*RWAPPL
Trigger: TAAAGGTGGTGCCCAGCGCAAGCACCACGTTTGACA...AAATCTGGTCTGATGGGGATAAGATAAAGGTGGTGCCCAGCGCAAGCACCACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520193.1
CDS-3UTR CAA 90 bp TCAGGCATACCAAGGACATGGCCCAGCTCATGTGACATCACTCCTACAAGAGCCTGCCATCTCAGGAAGTaGTCAAACGTGGTGCTTGCG +
Preference number: 5 (lower is better)
Translates to: SGIPRTWPSSCDITPTRACHLRK*SNVVLA
Trigger: CGCAAGCACCACGTTTGACAACTTCCTGAGATGGCA...GGCTCTTGTAGGAGTGATGTCACATGAGCTGGGCCATGTCCTTGGTATGCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520193.1
CDS-3UTR CAA 90 bp GCTGAGAAGCTGAGCATGGTCGTGGATCTTTTTCCCCAGGTTAGAACTGTGCCAAGTCCCACACGTCGATaGTTGAAGCTAATCCCGCTG +
Preference number: 5 (lower is better)
Translates to: AEKLSMVVDLFPQVRTVPSPTRR*LKLIPL
Trigger: CAGCGGGATTAGCTTCAACAATCGACGTGTGGGACT...TGGCACAGTTCTAACCTGGGGAAAAAGATCCACGACCATGCTCAGCTTCTCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520193.1
CDS-3UTR CAA 90 bp TGTCAAACGTGGTGCTTGCGCTGGGCACCACCTTTATCTTATCCCCATCAGACCCTGCCAGAGGGACACTaGGTGTTGAATGGAACATCA +
Preference number: 5 (lower is better)
Translates to: CQTWCLRWAPPLSYPHQTLPEGH*VLNGTS
Trigger: TGATGTTCCATTCAACACCAAGTGTCCCTCTGGCAG...GGTCTGATGGGGATAAGATAAAGGTGGTGCCCAGCGCAAGCACCACGTTTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520193.1
CDS-3UTR CAA 90 bp CCAGAGGGACACTTGGTGTTGAATGGAACATCAGGCATACCAAGGACATGGCCCGCTTCACAGCAGAGATaGGTACACTCCTTAGGAGAG +
Preference number: 5 (lower is better)
Translates to: PEGHLVLNGTSGIPRTWPASQQR*VHSLGE
Trigger: CTCTCCTAAGGAGTGTACCAATCTCTGCTGTGAAGC...GGGCCATGTCCTTGGTATGCCTGATGTTCCATTCAACACCAAGTGTCCCTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520193.1
CDS-3UTR CAA 90 bp TCAGGCATACCAAGGACATGGCCCAGCTCATGTGACATCACTCCTACAAGAGCCACTCTGTGGTATGGTTaGGAGCATCTCCTCCGCAAT +
Preference number: 5 (lower is better)
Translates to: SGIPRTWPSSCDITPTRATLWYG*EHLLRN
Trigger: ATTGCGGAGGAGATGCTCCAAACCATACCACAGAGT...GGCTCTTGTAGGAGTGATGTCACATGAGCTGGGCCATGTCCTTGGTATGCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520193.1
CDS-3UTR CAA 90 bp AAGATTCCTGGGACAGTTAGAGTTCTTGGTTCTTGTCCTGGCAAGGTAGCATCTCCACGCAGCATGAAGTaGTGGTCTCCCCAGTGTCCA +
Preference number: 5 (lower is better)
Translates to: KIPGTVRVLGSCPGKVASPRSMK*WSPQCP
Trigger: TGGACACTGGGGAGACCACAACTTCATGCTGCGTGG...AGATGCTACCTTGCCAGGACAAGAACCAAGAACTCTAACTGTCCCAGGAATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256412.8
ENST00000522298.1
CDS-3UTR CAA 90 bp CTCCTCCGCAATCAGTTCCAGGCTTCAGTTTACACGTTAGGGCTTCACAGCAGAGTGGTTAGCTGGGTCTaGTTCCTCCTGGTTAGATGT +
Preference number: 5 (lower is better)
Translates to: LLRNQFQASVYTLGLHSRVVSWV*FLLVRC
Trigger: ACATCTAACCAGGAGGAACAAGACCCAGCTAACCAC...TCTGCTGTGAAGCCCTAACGTGTAAACTGAAGCCTGGAACTGATTGCGGAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520193.1
CDS-3UTR CAA 90 bp GCTGAGAAGCTGAGCATGGTCGTGGATCTTTTTCCCCAGGTTAGAACTGTGCCAGATTCGAATTGGGCCTaGTTTCCCGTCAGTGCTCTT +
Preference number: 5 (lower is better)
Translates to: AEKLSMVVDLFPQVRTVPDSNWA*FPVSAL
Trigger: AAGAGCACTGACGGGAAACAAGGCCCAATTCGAATC...TGGCACAGTTCTAACCTGGGGAAAAAGATCCACGACCATGCTCAGCTTCTCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520193.1
CDS-3UTR CAA 90 bp ACGTGGTGCTTGCGCTGGGCACCACCTTTATCTTATCCCCATCAGACCAGATTTGGACAGTTAGAGTTCTaGGTTCTTGTCCTGGCAAGG +
Preference number: 5 (lower is better)
Translates to: TWCLRWAPPLSYPHQTRFGQLEF*VLVLAR
Trigger: CCTTGCCAGGACAAGAACCAAGAACTCTAACTGTCC...AAATCTGGTCTGATGGGGATAAGATAAAGGTGGTGCCCAGCGCAAGCACCACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520193.1
CDS-3UTR CAA 90 bp AAGATTCCTGGGACAGTTAGAGTTCTTGGTTCTTGTCCTGGCAAGGTAGCATCTTGTCAAACGTGGTGCTaGCGCTGGGCACCACCTTTA +
Preference number: 5 (lower is better)
Translates to: KIPGTVRVLGSCPGKVASCQTWC*RWAPPL
Trigger: TAAAGGTGGTGCCCAGCGCAAGCACCACGTTTGACA...AGATGCTACCTTGCCAGGACAAGAACCAAGAACTCTAACTGTCCCAGGAATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CAA 90 bp AAGATTCCTGGGACAGTTAGAGTTCTTGGTTCTTGTCCTGGCAAGGTAGCATCTGATTCGAATTGGGCCTaGTTTCCCGTCAGTGCTCTT +
Preference number: 5 (lower is better)
Translates to: KIPGTVRVLGSCPGKVASDSNWA*FPVSAL
Trigger: AAGAGCACTGACGGGAAACAAGGCCCAATTCGAATC...AGATGCTACCTTGCCAGGACAAGAACCAAGAACTCTAACTGTCCCAGGAATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CAA 90 bp TTGTCAAACGTGGTGCTTGCGCTGGGCACCACCTTTATCTTATCCCCATCAGACACCTACCAAGGCCACTaGAACATCTATGGTGTTATA +
Preference number: 5 (lower is better)
Translates to: LSNVVLALGTTFILSPSDTYQGH*NIYGVI
Trigger: TATAACACCATAGATGTTCAAGTGGCCTTGGTAGGT...GTCTGATGGGGATAAGATAAAGGTGGTGCCCAGCGCAAGCACCACGTTTGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520193.1
CDS-3UTR CAA 90 bp AAGATTCCTGGGACAGTTAGAGTTCTTGGTTCTTGTCCTGGCAAGGTAGCATCTCTGCCAGAGGGACACTaGGTGTTGAATGGAACATCA +
Preference number: 5 (lower is better)
Translates to: KIPGTVRVLGSCPGKVASLPEGH*VLNGTS
Trigger: TGATGTTCCATTCAACACCAAGTGTCCCTCTGGCAG...AGATGCTACCTTGCCAGGACAAGAACCAAGAACTCTAACTGTCCCAGGAATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CAA 90 bp AGTTCTTGGTTCTTGTCCTGGCAAGGTAGCATCTCAGTGAAGCAGACTTTTGGAGCTTCACAGCAGAGATaGGTACACTCCTTAGGAGAG +
Preference number: 5 (lower is better)
Translates to: SSWFLSWQGSISVKQTFGASQQR*VHSLGE
Trigger: CTCTCCTAAGGAGTGTACCAATCTCTGCTGTGAAGC...TCCAAAAGTCTGCTTCACTGAGATGCTACCTTGCCAGGACAAGAACCAAGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CAA 90 bp AAGATTCCTGGGACAGTTAGAGTTCTTGGTTCTTGTCCTGGCAAGGTAGCATCTGAGGGACACTTGGTGTaGAATGGAACATCAGGCATA +
Preference number: 5 (lower is better)
Translates to: KIPGTVRVLGSCPGKVASEGHLV*NGTSGI
Trigger: TATGCCTGATGTTCCATTCAACACCAAGTGTCCCTC...AGATGCTACCTTGCCAGGACAAGAACCAAGAACTCTAACTGTCCCAGGAATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CAA 90 bp AGTTCTTGGTTCTTGTCCTGGCAAGGTAGCATCTCAGTGAAGCAGACTTTTGGAGAGGGACACTTGGTGTaGAATGGAACATCAGGCATA +
Preference number: 5 (lower is better)
Translates to: SSWFLSWQGSISVKQTFGEGHLV*NGTSGI
Trigger: TATGCCTGATGTTCCATTCAACACCAAGTGTCCCTC...TCCAAAAGTCTGCTTCACTGAGATGCTACCTTGCCAGGACAAGAACCAAGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CAA 90 bp AAGATTCCTGGGACAGTTAGAGTTCTTGGTTCTTGTCCTGGCAAGGTAGCATCTTGTAGGAATAGGTGCTaGCAGCAGGCACTTTGGTTT +
Preference number: 5 (lower is better)
Translates to: KIPGTVRVLGSCPGKVASCRNRC*QQALWF
Trigger: AAACCAAAGTGCCTGCTGCAAGCACCTATTCCTACA...AGATGCTACCTTGCCAGGACAAGAACCAAGAACTCTAACTGTCCCAGGAATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CAA 90 bp GAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATAACAATACCACGCAGCATGAAGTaGTGGTCTCCCCAGTGTCCA +
Preference number: 5 (lower is better)
Translates to: EPMSLITSVYLFPGLITIPRSMK*WSPQCP
Trigger: TGGACACTGGGGAGACCACAACTTCATGCTGCGTGG...TATTGTTATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256412.8
ENST00000522298.1
CDS-3UTR CAA 90 bp TTCTCAGGTTTCGTGGTAATTTCCTCTCCTCTGGGTGAGTACAATGTTTCAGTGGAGGGACACTTGGTGTaGAATGGAACATCAGGCATA +
Preference number: 5 (lower is better)
Translates to: FSGFVVISSPLGEYNVSVEGHLV*NGTSGI
Trigger: TATGCCTGATGTTCCATTCAACACCAAGTGTCCCTC...CACTGAAACATTGTACTCACCCAGAGGAGAGGAAATTACCACGAAACCTGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520193.1
CDS-3UTR CAA 90 bp AAGATTCCTGGGACAGTTAGAGTTCTTGGTTCTTGTCCTGGCAAGGTAGCATCTGAAGACTGCTTTCTTTaGTTCTCCAAAGGGCAGAAC +
Preference number: 5 (lower is better)
Translates to: KIPGTVRVLGSCPGKVASEDCFL*FSKGQN
Trigger: GTTCTGCCCTTTGGAGAACAAAAGAAAGCAGTCTTC...AGATGCTACCTTGCCAGGACAAGAACCAAGAACTCTAACTGTCCCAGGAATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CAA 90 bp AAGATTCCTGGGACAGTTAGAGTTCTTGGTTCTTGTCCTGGCAAGGTAGCATCTACCTACCAAGGCCACTaGAACATCTATGGTGTTATA +
Preference number: 5 (lower is better)
Translates to: KIPGTVRVLGSCPGKVASTYQGH*NIYGVI
Trigger: TATAACACCATAGATGTTCAAGTGGCCTTGGTAGGT...AGATGCTACCTTGCCAGGACAAGAACCAAGAACTCTAACTGTCCCAGGAATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CAA 90 bp CTAAACAAAGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGAGTCCCACACGTCGATaGTTGAAGCTAATCCCGCTG +
Preference number: 5 (lower is better)
Translates to: LNKEPMSLITSVYLFPGLSPTRR*LKLIPL
Trigger: CAGCGGGATTAGCTTCAACAATCGACGTGTGGGACT...CAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCTTTGTTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CAA 90 bp CTAAACAAAGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGGGGAACACAAGGAATTaGAAGCTGCCAGTCCCACAC +
Preference number: 5 (lower is better)
Translates to: LNKEPMSLITSVYLFPGLGNTRN*KLPVPH
Trigger: GTGTGGGACTGGCAGCTTCAAATTCCTTGTGTTCCC...CAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCTTTGTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CAA 90 bp GCAGACTTTTGGATTCACTCTGTGGTATGGTTTGGAGCATCTCCTCCGCAATCATCTGTCTGGTTGTTCTaGATCTCTCTTTTGTGTAAA +
Preference number: 5 (lower is better)
Translates to: ADFWIHSVVWFGASPPQSSVWLF*ISLLCK
Trigger: TTTACACAAAAGAGAGATCAAGAACAACCAGACAGA...TGATTGCGGAGGAGATGCTCCAAACCATACCACAGAGTGAATCCAAAAGTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520193.1
CDS-3UTR CAA 90 bp CTAAACAAAGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGGTGGTTAGCTGGGTCTaGTTCCTCCTGGTTAGATGT +
Preference number: 5 (lower is better)
Translates to: LNKEPMSLITSVYLFPGLVVSWV*FLLVRC
Trigger: ACATCTAACCAGGAGGAACAAGACCCAGCTAACCAC...CAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCTTTGTTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CAA 90 bp GAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATAACAATATGCCATCTCAGGAAGTaGTCAAACGTGGTGCTTGCG +
Preference number: 5 (lower is better)
Translates to: EPMSLITSVYLFPGLITICHLRK*SNVVLA
Trigger: CGCAAGCACCACGTTTGACAACTTCCTGAGATGGCA...TATTGTTATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CAA 90 bp AGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATAACAATTGCCATCTCAGGAAGTaGTCAAACGTGGTGCTTGCG +
Preference number: 5 (lower is better)
Translates to: RANVSNYICLPVSWTDNNCHLRK*SNVVLA
Trigger: CGCAAGCACCACGTTTGACAACTTCCTGAGATGGCA...ATTGTTATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CAA 90 bp AACAAAGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATACCCACACGTCGATTGTaGAAGCTAATCCCGCTGAGA +
Preference number: 5 (lower is better)
Translates to: NKEPMSLITSVYLFPGLIPTRRL*KLIPLR
Trigger: TCTCAGCGGGATTAGCTTCAACAATCGACGTGTGGG...TATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCTTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CAA 90 bp ATTAGGCCTAAACAAAGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCCCCACACGTCGATTGTaGAAGCTAATCCCGCTGAGA +
Preference number: 5 (lower is better)
Translates to: IRPKQRANVSNYICLPVSPTRRL*KLIPLR
Trigger: TCTCAGCGGGATTAGCTTCAACAATCGACGTGTGGG...GGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCTTTGTTTAGGCCTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CAA 90 bp AGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATAACAATCCCACACGTCGATTGTaGAAGCTAATCCCGCTGAGA +
Preference number: 5 (lower is better)
Translates to: RANVSNYICLPVSWTDNNPTRRL*KLIPLR
Trigger: TCTCAGCGGGATTAGCTTCAACAATCGACGTGTGGG...ATTGTTATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CAA 90 bp AGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATAACAATGGGAACACAAGGAATTaGAAGCTGCCAGTCCCACAC +
Preference number: 5 (lower is better)
Translates to: RANVSNYICLPVSWTDNNGNTRN*KLPVPH
Trigger: GTGTGGGACTGGCAGCTTCAAATTCCTTGTGTTCCC...ATTGTTATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CAA 90 bp CTAAACAAAGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGGGACAGTTAGAGTTCTaGGTTCTTGTCCTGGCAAGG +
Preference number: 5 (lower is better)
Translates to: LNKEPMSLITSVYLFPGLGQLEF*VLVLAR
Trigger: CCTTGCCAGGACAAGAACCAAGAACTCTAACTGTCC...CAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCTTTGTTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CAA 90 bp AAGATTCCTGGGACAGTTAGAGTTCTTGGTTCTTGTCCTGGCAAGGTAGCATCTTCTGTCTGGTTGTTCTaGATCTCTCTTTTGTGTAAA +
Preference number: 5 (lower is better)
Translates to: KIPGTVRVLGSCPGKVASSVWLF*ISLLCK
Trigger: TTTACACAAAAGAGAGATCAAGAACAACCAGACAGA...AGATGCTACCTTGCCAGGACAAGAACCAAGAACTCTAACTGTCCCAGGAATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256412.8
ENST00000520193.1
CDS-3UTR CAA 90 bp AGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATAACAATGATTCGAATTGGGCCTaGTTTCCCGTCAGTGCTCTT +
Preference number: 5 (lower is better)
Translates to: RANVSNYICLPVSWTDNNDSNWA*FPVSAL
Trigger: AAGAGCACTGACGGGAAACAAGGCCCAATTCGAATC...ATTGTTATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CAA 90 bp AACAATTCTGGAGTGTTAACTCTGAATAGTTTAGCCGTGCATTTTAAGGTGATTGGGAACACAAGGAATTaGAAGCTGCCAGTCCCACAC +
Preference number: 5 (lower is better)
Translates to: NNSGVLTLNSLAVHFKVIGNTRN*KLPVPH
Trigger: GTGTGGGACTGGCAGCTTCAAATTCCTTGTGTTCCC...AATCACCTTAAAATGCACGGCTAAACTATTCAGAGTTAACACTCCAGAATTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CAA 90 bp GAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATAACAATACTGCCAGAGGGACACTaGGTGTTGAATGGAACATCA +
Preference number: 5 (lower is better)
Translates to: EPMSLITSVYLFPGLITILPEGH*VLNGTS
Trigger: TGATGTTCCATTCAACACCAAGTGTCCCTCTGGCAG...TATTGTTATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CAA 90 bp GAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATAACAATAGCTTCACAGCAGAGATaGGTACACTCCTTAGGAGAG +
Preference number: 5 (lower is better)
Translates to: EPMSLITSVYLFPGLITIASQQR*VHSLGE
Trigger: CTCTCCTAAGGAGTGTACCAATCTCTGCTGTGAAGC...TATTGTTATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CAA 90 bp AGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATAACAATACTCTGTGGTATGGTTaGGAGCATCTCCTCCGCAAT +
Preference number: 5 (lower is better)
Translates to: RANVSNYICLPVSWTDNNTLWYG*EHLLRN
Trigger: ATTGCGGAGGAGATGCTCCAAACCATACCACAGAGT...ATTGTTATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CAA 90 bp ATTAGGCCTAAACAAAGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCGGACAGTTAGAGTTCTaGGTTCTTGTCCTGGCAAGG +
Preference number: 5 (lower is better)
Translates to: IRPKQRANVSNYICLPVSGQLEF*VLVLAR
Trigger: CCTTGCCAGGACAAGAACCAAGAACTCTAACTGTCC...GGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCTTTGTTTAGGCCTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CAA 90 bp AACAATTCTGGAGTGTTAACTCTGAATAGTTTAGCCGTGCATTTTAAGGTGATTGTGGTTAGCTGGGTCTaGTTCCTCCTGGTTAGATGT +
Preference number: 5 (lower is better)
Translates to: NNSGVLTLNSLAVHFKVIVVSWV*FLLVRC
Trigger: ACATCTAACCAGGAGGAACAAGACCCAGCTAACCAC...AATCACCTTAAAATGCACGGCTAAACTATTCAGAGTTAACACTCCAGAATTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CAA 90 bp CTAAACAAAGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGGGCTATTGCTTGAGTTaGAACAATGAGCCAAAGTAC +
Preference number: 5 (lower is better)
Translates to: LNKEPMSLITSVYLFPGLGYCLS*NNEPKY
Trigger: GTACTTTGGCTCATTGTTCAAACTCAAGCAATAGCC...CAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCTTTGTTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256412.8
CDS-3UTR CAA 90 bp AACAATTCTGGAGTGTTAACTCTGAATAGTTTAGCCGTGCATTTTAAGGTGATTTGTAGGAATAGGTGCTaGCAGCAGGCACTTTGGTTT +
Preference number: 5 (lower is better)
Translates to: NNSGVLTLNSLAVHFKVICRNRC*QQALWF
Trigger: AAACCAAAGTGCCTGCTGCAAGCACCTATTCCTACA...AATCACCTTAAAATGCACGGCTAAACTATTCAGAGTTAACACTCCAGAATTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CAA 90 bp AACAAAGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATAGAAGACTGCTTTCTTTaGTTCTCCAAAGGGCAGAAC +
Preference number: 5 (lower is better)
Translates to: NKEPMSLITSVYLFPGLIEDCFL*FSKGQN
Trigger: GTTCTGCCCTTTGGAGAACAAAAGAAAGCAGTCTTC...TATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCTTTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CAA 90 bp GAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATAACAATAACCTACCAAGGCCACTaGAACATCTATGGTGTTATA +
Preference number: 5 (lower is better)
Translates to: EPMSLITSVYLFPGLITITYQGH*NIYGVI
Trigger: TATAACACCATAGATGTTCAAGTGGCCTTGGTAGGT...TATTGTTATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256412.8
ENST00000520193.1
ENST00000522298.1
CDS-3UTR CAA 90 bp ATTAGGCCTAAACAAAGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCGGTTCATACCTTTCCTaGAGTTTGAACAATGAGCCA +
Preference number: 5 (lower is better)
Translates to: IRPKQRANVSNYICLPVSGSYLS*SLNNEP
Trigger: TGGCTCATTGTTCAAACTCAAGGAAAGGTATGAACC...GGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCTTTGTTTAGGCCTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522298.1
CDS-3UTR CAA 90 bp ATTAGGCCTAAACAAAGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCCTTTATGGCTATTGCTaGAGTTTGAACAATGAGCCA +
Preference number: 5 (lower is better)
Translates to: IRPKQRANVSNYICLPVSLYGYC*SLNNEP
Trigger: TGGCTCATTGTTCAAACTCAAGCAATAGCCATAAAG...GGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCTTTGTTTAGGCCTAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256412.8
CDS-3UTR CAA 90 bp AGAGCCAATGTCTCTAATTACATCTGTTTACCTGTTTCCTGGACTGATAACAATGAATGTTCCTCATCTTaGAGAGATATTTATGGCTGT +
Preference number: 5 (lower is better)
Translates to: RANVSNYICLPVSWTDNNECSSS*RDIYGC
Trigger: ACAGCCATAAATATCTCTCAAAGATGAGGAACATTC...ATTGTTATCAGTCCAGGAAACAGGTAAACAGATGTAATTAGAGACATTGGCTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256412.8
CDS TCA 72 bp TGGCCACTGCAGGTAGCTGGGAGATCCCACGCAGCATaGAGTTGTGGTCTCCCCAGTGTCCAGTTTTATCTT +
Preference number: 6 (lower is better)
Translates to: WPLQVAGRSHAA*SCGLPSVQFYL
Trigger: AAGATAAAACTGGACACTGGGGAGACCACAACTTCATGCTGCGTGGGATCTCCCAGCTACCTGCAGTGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256412.8
ENST00000522298.1
CDS CCA 72 bp GCAGGTAGCTGGGAGATCCCACGCAGCATGAAGTTGTaGTCTCCCCAGTGTCCAGTTTTATCTTCTCCAATT +
Preference number: 6 (lower is better)
Translates to: AGSWEIPRSMKL*SPQCPVLSSPI
Trigger: AATTGGAGAAGATAAAACTGGACACTGGGGAGACCACAACTTCATGCTGCGTGGGATCTCCCAGCTACCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256412.8
CDS TCA 72 bp TATTTATTGAATGCTGACTTTAGGCCACGCACAGTTTaGGGCTTGAGTTTGAACAATGAGCCAAAGTACAGG +
Preference number: 6 (lower is better)
Translates to: YLLNADFRPRTV*GLSLNNEPKYR
Trigger: CCTGTACTTTGGCTCATTGTTCAAACTCAAGCCTCAAACTGTGCGTGGCCTAAAGTCAGCATTCAATAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520193.1