RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADAM8 (Homo sapiens)

Ensembl gene IDs: ENSG00000151651

Ensembl transcript IDs: ENST00000415217.7, ENST00000445355.8, ENST00000463298.5, ENST00000468964.1, ENST00000485491.6, ENST00000486609.1, ENST00000537099.5, ENST00000559018.1, ENST00000559180.1, ENST00000560135.5, ENST00000561175.1

Found 586 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCTCGGGATGGCAGAGAGTCCCCGGGCCGAGGCCTGAAGACGGCTaGCGTCCGGGGTCCCAGGAGGCTGCCCAGGCTGTCGTCGCTGAC +
Preference number: 1 (lower is better)
Translates to: LSGWQRVPGPRPEDG*RPGSQEAAQAVVAD
Trigger: GTCAGCGACGACAGCCTGGGCAGCCTCCTGGGACCCCGGACGGCAGCCGTCTTCAGGCCTCGGCCCGGGGACTCTCTGCCATCCCGAGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560135.5
3UTR CCA 90 bp CTCGAAGAGCACGCAGGGGAACCTGGTCCTGGGATGGAGTCTTTCTaGGGATGCCCCACGTCTGTGCTGCCTGGAACCGGGTGCCCAGGG +
Preference number: 1 (lower is better)
Translates to: LEEHAGEPGPGMESF*GCPTSVLPGTGCPG
Trigger: CCCTGGGCACCCGGTTCCAGGCAGCACAGACGTGGGGCATCCCCAGAAAGACTCCATCCCAGGACCAGGTTCCCCTGCGTGCTCTTCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
3UTR GCA 90 bp AGCTGTACGTTGTCATGCAGGTGCCGCCGTGTCCGTTGCCGTGCCTaGCAGGTCAGGAGGTTCTCCAGTGTGACACTGGGGTCGGGGCTG +
Preference number: 1 (lower is better)
Translates to: SCTLSCRCRRVRCRA*QVRRFSSVTLGSGL
Trigger: CAGCCCCGACCCCAGTGTCACACTGGAGAACCTCCTGACCTGGCAGGCACGGCAACGGACACGGCGGCACCTGCATGACAACGTACAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560135.5
3UTR GCA 90 bp GATGAGCTGTACGTTGTCATGCAGGTGCCGCCGTGTCCGTTGCCGTaGCTGCCAGGTCAGGAGGTTCTCCAGTGTGACACTGGGGTCGGG +
Preference number: 1 (lower is better)
Translates to: DELYVVMQVPPCPLP*LPGQEVLQCDTGVG
Trigger: CCCGACCCCAGTGTCACACTGGAGAACCTCCTGACCTGGCAGGCACGGCAACGGACACGGCGGCACCTGCATGACAACGTACAGCTCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560135.5
3UTR CCA 90 bp CATGGGAAACAGGCCCCAAGATCAGGGGACCTGGAGTCGGGAGCTTaGGGTGCAGTCTGCTCACTGACACCCTCTCGAAGAGCACGCAGG +
Preference number: 1 (lower is better)
Translates to: HGKQAPRSGDLESGA*GAVCSLTPSRRARR
Trigger: CCTGCGTGCTCTTCGAGAGGGTGTCAGTGAGCAGACTGCACCCCAAGCTCCCGACTCCAGGTCCCCTGATCTTGGGGCCTGTTTCCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
3UTR CCA 90 bp TGCAGACAGCTGGGGCTACACGTGGCCAAGGCGGGGAGAAGGAATTaGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTC +
Preference number: 1 (lower is better)
Translates to: CRQLGLHVAKAGRRN*LRAWTAGASQVDAF
Trigger: GAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAATTCCTTCTCCCCGCCTTGGCCACGTGTAGCCCCAGCTGTCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
3UTR GCA 90 bp CTTGTCCACGTGATTCACCACCTCCAGCACCCGATGACGCACGGCTaGTTCGCTCCCCAGCATCTGGAACTCTGCATTGTCCACGACCAC +
Preference number: 1 (lower is better)
Translates to: LVHVIHHLQHPMTHG*FAPQHLELCIVHDH
Trigger: GTGGTCGTGGACAATGCAGAGTTCCAGATGCTGGGGAGCGAAGCAGCCGTGCGTCATCGGGTGCTGGAGGTGGTGAATCACGTGGACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560135.5
3UTR CCA 90 bp CAGCTGAGCCTGCAAAGTCAGGGTCTAGGGCTGAGCGGCACTAGCTaGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTC +
Preference number: 1 (lower is better)
Translates to: QLSLQSQGLGLSGTS*TVECWNAWLLCRNF
Trigger: GAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTGACTTTGCAGGCTCAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
3UTR CCA 90 bp CTAGGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATaGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGCGCAGG +
Preference number: 1 (lower is better)
Translates to: LGLSGTSWTVECWNA*LLCRNFSKFPHRRR
Trigger: CCTGCGCCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
3UTR CCA 90 bp GGGCTACACGTGGCCAAGGCGGGGAGAAGGAATTGGCTGAGGGCGTaGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGAGGTTAGAA +
Preference number: 1 (lower is better)
Translates to: GLHVAKAGRRNWLRA*TAGASQVDAFLRLE
Trigger: TTCTAACCTCAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAATTCCTTCTCCCCGCCTTGGCCACGTGTAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
3UTR TCA 90 bp TTCTCCAGTGTGACACTGGGGTCGGGGCTGACGTGGAACCTGTCCTaGCTATTCCAAATCTCCAGGCCCACCAGGACCACACGGAAGTTG +
Preference number: 1 (lower is better)
Translates to: FSSVTLGSGLTWNLS*LFQISRPTRTTRKL
Trigger: CAACTTCCGTGTGGTCCTGGTGGGCCTGGAGATTTGGAATAGTCAGGACAGGTTCCACGTCAGCCCCGACCCCAGTGTCACACTGGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560135.5
3UTR CCA 90 bp AGTCAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTaGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACAC +
Preference number: 1 (lower is better)
Translates to: SQGLGLSGTSWTVEC*NAWLLCRNFSKFPH
Trigger: GTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
3UTR GCA 90 bp CAAAGTCAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCGTGGAATaGTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCA +
Preference number: 1 (lower is better)
Translates to: QSQGLGLSGTSWTVE*WNAWLLCRNFSKFP
Trigger: TGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTGACTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
3UTR-3UTR GCA 90 bp CTCCACGTAGCGGGTCTCTCGGGATGGCAGAGAGTCCCCGGGCCGAGGCCTGAAGCCTGGTACACGGCGTaGCGTCCGCCCTCGCCACCT +
Preference number: 2 (lower is better)
Translates to: LHVAGLSGWQRVPGPRPEAWYTA*RPPSPP
Trigger: AGGTGGCGAGGGCGGACGGCACGCCGTGTACCAGGC...TTCAGGCCTCGGCCCGGGGACTCTCTGCCATCCCGAGAGACCCGCTACGTGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560135.5
3UTR-3UTR TCA 90 bp CCGATGACGCACGGCTGCTTCGCTCCCCAGCATCTGGAACTCTGCATTGTCCACCCAGGCTGTCGTCGCTaGCCCCGCAGGTCCCGGCCG +
Preference number: 2 (lower is better)
Translates to: PMTHGCFAPQHLELCIVHPGCRR*PRRSRP
Trigger: CGGCCGGGACCTGCGGGGTCAGCGACGACAGCCTGG...GTGGACAATGCAGAGTTCCAGATGCTGGGGAGCGAAGCAGCCGTGCGTCATCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560135.5
3UTR-3UTR CCA 90 bp GTCCACGTGATTCACCACCTCCAGCACCCGATGACGCACGGCTGCTTCGCTCCCGCGGGTCTCTCGGGATaGCAGAGAGTCCCCGGGCCG +
Preference number: 2 (lower is better)
Translates to: VHVIHHLQHPMTHGCFAPAGLSG*QRVPGP
Trigger: CGGCCCGGGGACTCTCTGCCATCCCGAGAGACCCGC...GGGAGCGAAGCAGCCGTGCGTCATCGGGTGCTGGAGGTGGTGAATCACGTGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560135.5
3UTR-3UTR GCA 90 bp CCACGTGATTCACCACCTCCAGCACCCGATGACGCACGGCTGCTTCGCTCCCCAGCCGTCTGCAGCAGGTaGTCAGCCTGGTACACGGCG +
Preference number: 2 (lower is better)
Translates to: PRDSPPPAPDDARLLRSPAVCSR*SAWYTA
Trigger: CGCCGTGTACCAGGCTGAGCACCTGCTGCAGACGGC...TGGGGAGCGAAGCAGCCGTGCGTCATCGGGTGCTGGAGGTGGTGAATCACGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560135.5
3UTR-3UTR GCA 90 bp GATGAGCTGTACGTTGTCATGCAGGTGCCGCCGTGTCCGTTGCCGTGCCTGCCACAGGTCCCGGCCGTCTaGAGCAGGTGCTCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: DELYVVMQVPPCPLPCLPQVPAV*SRCSAW
Trigger: CCAGGCTGAGCACCTGCTGCAGACGGCCGGGACCTG...TGGCAGGCACGGCAACGGACACGGCGGCACCTGCATGACAACGTACAGCTCATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560135.5
3UTR-3UTR CCA 90 bp CGAAGAGCACGCAGGGGAACCTGGTCCTGGGATGGAGTCTTTCTGGGGATGCCCCACGTCTGTGCTGCCTaGAACCGGGTGCCCAGGGCA +
Preference number: 2 (lower is better)
Translates to: RRARRGTWSWDGVFLGMPHVCAA*NRVPRA
Trigger: TGCCCTGGGCACCCGGTTCCAGGCAGCACAGACGTG...GGGCATCCCCAGAAAGACTCCATCCCAGGACCAGGTTCCCCTGCGTGCTCTTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
3UTR-3UTR CCA 90 bp TGGGATGGAGTCTTTCTGGGGATGCCCCACGTCTGTGCTGCCTGGAACCGGGTGGTGCCTGCAGACAGCTaGGGCTACACGTGGCCAAGG +
Preference number: 2 (lower is better)
Translates to: WDGVFLGMPHVCAAWNRVVPADS*GYTWPR
Trigger: CCTTGGCCACGTGTAGCCCCAGCTGTCTGCAGGCAC...CACCCGGTTCCAGGCAGCACAGACGTGGGGCATCCCCAGAAAGACTCCATCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
3UTR-3UTR GCA 90 bp CTAGCTGGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCACCACACAGGCGCAGGTaGCCCCCTAGGGTGCTGTGG +
Preference number: 2 (lower is better)
Translates to: LAGPWNAGTHGFSAATSPPHRRR*PPRVLW
Trigger: CCACAGCACCCTAGGGGGGCACCTGCGCCTGTGTGG...TGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415217.7
3UTR-3UTR CCA 90 bp AACCTGGTCCTGGGATGGAGTCTTTCTGGGGATGCCCCACGTCTGTGCTGCCTGGTGCCTGCAGACAGCTaGGGCTACACGTGGCCAAGG +
Preference number: 2 (lower is better)
Translates to: NLVLGWSLSGDAPRLCCLVPADS*GYTWPR
Trigger: CCTTGGCCACGTGTAGCCCCAGCTGTCTGCAGGCAC...CAGGCAGCACAGACGTGGGGCATCCCCAGAAAGACTCCATCCCAGGACCAGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
3UTR-3UTR CCA 90 bp TCACTGACACCCTCTCGAAGAGCACGCAGGGGAACCTGGTCCTGGGATGGAGTCCAGCTCATCCCAGCCTaGTGCCTGCAGACAGCTGGG +
Preference number: 2 (lower is better)
Translates to: SLTPSRRARRGTWSWDGVQLIPA*CLQTAG
Trigger: CCCAGCTGTCTGCAGGCACCAGGCTGGGATGAGCTG...GACTCCATCCCAGGACCAGGTTCCCCTGCGTGCTCTTCGAGAGGGTGTCAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
3UTR CAA 90 bp CTGCAGACAGCTGGGGCTACACGTGGCCAAGGCGGGGAGAAGGAATaGGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATT +
Preference number: 2 (lower is better)
Translates to: LQTAGATRGQGGEKE*AEGVDSRSLSGRCI
Trigger: AATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAATTCCTTCTCCCCGCCTTGGCCACGTGTAGCCCCAGCTGTCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
3UTR-3UTR GCA 90 bp GCTCCCCAGCATCTGGAACTCTGCATTGTCCACGACCACATACAGCTCCACGTAAGGCCTGAAGACGGCTaGCGTCCGGGGTCCCAGGAG +
Preference number: 2 (lower is better)
Translates to: APQHLELCIVHDHIQLHVRPEDG*RPGSQE
Trigger: CTCCTGGGACCCCGGACGGCAGCCGTCTTCAGGCCT...TACGTGGAGCTGTATGTGGTCGTGGACAATGCAGAGTTCCAGATGCTGGGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560135.5
3UTR-3UTR CCA 90 bp GGAACCTGGTCCTGGGATGGAGTCTTTCTGGGGATGCCCCACGTCTGTGCTGCCCTGAGCGGCACTAGCTaGACCGTGGAATGCTGGAAC +
Preference number: 2 (lower is better)
Translates to: GTWSWDGVFLGMPHVCAALSGTS*TVECWN
Trigger: GTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAG...GGCAGCACAGACGTGGGGCATCCCCAGAAAGACTCCATCCCAGGACCAGGTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
3UTR-3UTR CCA 90 bp ACTGACACCCTCTCGAAGAGCACGCAGGGGAACCTGGTCCTGGGATGGAGTCTTAGCTGGGGCTACACGTaGCCAAGGCGGGGAGAAGGA +
Preference number: 2 (lower is better)
Translates to: TDTLSKSTQGNLVLGWSLSWGYT*PRRGEG
Trigger: TCCTTCTCCCCGCCTTGGCCACGTGTAGCCCCAGCT...AAGACTCCATCCCAGGACCAGGTTCCCCTGCGTGCTCTTCGAGAGGGTGTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
3UTR-3UTR GCA 90 bp ACACACAAAGCTGGGGCTGTCCCTCTTGAATCCCATGGGAAACAGGCCCCAAGAGATGCCCCACGTCTGTaGTGCCTGGAACCGGGTGCC +
Preference number: 2 (lower is better)
Translates to: THKAGAVPLESHGKQAPRDAPRL*CLEPGA
Trigger: GGCACCCGGTTCCAGGCAGCACAGACGTGGGGCATC...TCTTGGGGCCTGTTTCCCATGGGATTCAAGAGGGACAGCCCCAGCTTTGTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
3UTR-3UTR CCA 90 bp CACACACGCACCCGCAAGCACACAGCTCATCCCAGCCTGGTGCCTGCAGACAGCGAATGCTGGAACGCATaGCTTCTCTGCCGCAACTTC +
Preference number: 2 (lower is better)
Translates to: HTRTRKHTAHPSLVPADSECWNA*LLCRNF
Trigger: GAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTC...GCTGTCTGCAGGCACCAGGCTGGGATGAGCTGTGTGCTTGCGGGTGCGTGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
3UTR-3UTR TCA 90 bp ACTGACACCCTCTCGAAGAGCACGCAGGGGAACCTGGTCCTGGGATGGAGTCTTGTATATGTGGCCTCCTaGACACAGCGGGAGACCAGC +
Preference number: 2 (lower is better)
Translates to: TDTLSKSTQGNLVLGWSLVYVAS*TQRETS
Trigger: GCTGGTCTCCCGCTGTGTTCAGGAGGCCACATATAC...AAGACTCCATCCCAGGACCAGGTTCCCCTGCGTGCTCTTCGAGAGGGTGTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
3UTR-3UTR TCA 90 bp CAGGAGGTTCTCCAGTGTGACACTGGGGTCGGGGCTGACGTGGAACCTGTCCTGTATAGCTTGTCCACGTaGTTCACCACCTCCAGCACC +
Preference number: 2 (lower is better)
Translates to: QEVLQCDTGVGADVEPVLYSLST*FTTSST
Trigger: GGTGCTGGAGGTGGTGAATCACGTGGACAAGCTATA...CAGGACAGGTTCCACGTCAGCCCCGACCCCAGTGTCACACTGGAGAACCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560135.5
3UTR-3UTR CCA 90 bp CGAAGAGCACGCAGGGGAACCTGGTCCTGGGATGGAGTCTTTCTGGGGATGCCCGAATGCTGGAACGCATaGCTTCTCTGCCGCAACTTC +
Preference number: 2 (lower is better)
Translates to: RRARRGTWSWDGVFLGMPECWNA*LLCRNF
Trigger: GAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTC...GGGCATCCCCAGAAAGACTCCATCCCAGGACCAGGTTCCCCTGCGTGCTCTTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
3UTR-3UTR CCA 90 bp AACCTGGTCCTGGGATGGAGTCTTTCTGGGGATGCCCCACGTCTGTGCTGCCTGTGGACCGTGGAATGCTaGAACGCATGGCTTCTCTGC +
Preference number: 2 (lower is better)
Translates to: NLVLGWSLSGDAPRLCCLWTVEC*NAWLLC
Trigger: GCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCA...CAGGCAGCACAGACGTGGGGCATCCCCAGAAAGACTCCATCCCAGGACCAGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
3UTR-3UTR CCA 90 bp ACTGACACCCTCTCGAAGAGCACGCAGGGGAACCTGGTCCTGGGATGGAGTCTTTGGACCGTGGAATGCTaGAACGCATGGCTTCTCTGC +
Preference number: 2 (lower is better)
Translates to: TDTLSKSTQGNLVLGWSLWTVEC*NAWLLC
Trigger: GCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCA...AAGACTCCATCCCAGGACCAGGTTCCCCTGCGTGCTCTTCGAGAGGGTGTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
3UTR-3UTR GCA 90 bp GAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGAGGTTAGAACAAGCTGGACCGTGGAATaGTGGAACGCATGGCTTCTC +
Preference number: 2 (lower is better)
Translates to: EGVDSRSLSGRCIPEVRTSWTVE*WNAWLL
Trigger: GAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCT...TGTTCTAACCTCAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
3UTR-3UTR CCA 90 bp GAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGAGGTTAGAACATGGACCGTGGAATGCTaGAACGCATGGCTTCTCTGC +
Preference number: 2 (lower is better)
Translates to: EGVDSRSLSGRCIPEVRTWTVEC*NAWLLC
Trigger: GCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCA...TGTTCTAACCTCAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
3UTR-3UTR CCA 90 bp TTCCTAAGCTTAAACACACACAAAGCTGGGGCTGTCCCTCTTGAATCCCATGGGCAAGATCAGGGGACCTaGAGTCGGGAGCTTGGGGTG +
Preference number: 2 (lower is better)
Translates to: FLSLNTHKAGAVPLESHGQDQGT*SRELGV
Trigger: CACCCCAAGCTCCCGACTCCAGGTCCCCTGATCTTG...CCCATGGGATTCAAGAGGGACAGCCCCAGCTTTGTGTGTGTTTAAGCTTAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
3UTR-3UTR GCA 90 bp ACTGACACCCTCTCGAAGAGCACGCAGGGGAACCTGGTCCTGGGATGGAGTCTTAGCCTCTCAGGTAGATaGATTCCTGAGGTTAGAACA +
Preference number: 2 (lower is better)
Translates to: TDTLSKSTQGNLVLGWSLSLSGR*IPEVRT
Trigger: TGTTCTAACCTCAGGAATGCATCTACCTGAGAGGCT...AAGACTCCATCCCAGGACCAGGTTCCCCTGCGTGCTCTTCGAGAGGGTGTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
3UTR-3UTR CCA 90 bp TTCCTAAGCTTAAACACACACAAAGCTGGGGCTGTCCCTCTTGAATCCCATGGGAATTGGCTGAGGGCGTaGACAGCAGGAGCCTCTCAG +
Preference number: 2 (lower is better)
Translates to: FLSLNTHKAGAVPLESHGNWLRA*TAGASQ
Trigger: CTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAATT...CCCATGGGATTCAAGAGGGACAGCCCCAGCTTTGTGTGTGTTTAAGCTTAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
3UTR-3UTR CCA 90 bp TTCCTAAGCTTAAACACACACAAAGCTGGGGCTGTCCCTCTTGAATCCCATGGGAGACCAGCGGCCACCTaGAGACACGTACACACACAC +
Preference number: 2 (lower is better)
Translates to: FLSLNTHKAGAVPLESHGRPAAT*RHVHTH
Trigger: GTGTGTGTGTACGTGTCTCCAGGTGGCCGCTGGTCT...CCCATGGGATTCAAGAGGGACAGCCCCAGCTTTGTGTGTGTTTAAGCTTAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
3UTR-3UTR CCA 90 bp TTCCTAAGCTTAAACACACACAAAGCTGGGGCTGTCCCTCTTGAATCCCATGGGGAGGGGCTGTATATGTaGCCTCCTGAACACAGCGGG +
Preference number: 2 (lower is better)
Translates to: FLSLNTHKAGAVPLESHGEGLYM*PPEHSG
Trigger: CCCGCTGTGTTCAGGAGGCCACATATACAGCCCCTC...CCCATGGGATTCAAGAGGGACAGCCCCAGCTTTGTGTGTGTTTAAGCTTAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
3UTR GCA 72 bp TCGCTGACCCCGCAGGTCCCGGCCGTCTGCAGCAGGTaGTCAGCCTGGTACACGGCGTGCCGTCCGCCCTCG +
Preference number: 3 (lower is better)
Translates to: SLTPQVPAVCSR*SAWYTACRPPS
Trigger: CGAGGGCGGACGGCACGCCGTGTACCAGGCTGAGCACCTGCTGCAGACGGCCGGGACCTGCGGGGTCAGCGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560135.5
3UTR GCA 72 bp TGGCAGAGAGTCCCCGGGCCGAGGCCTGAAGACGGCTaGCGTCCGGGGTCCCAGGAGGCTGCCCAGGCTGTC +
Preference number: 3 (lower is better)
Translates to: WQRVPGPRPEDG*RPGSQEAAQAV
Trigger: GACAGCCTGGGCAGCCTCCTGGGACCCCGGACGGCAGCCGTCTTCAGGCCTCGGCCCGGGGACTCTCTGCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560135.5
3UTR TCA 72 bp TCTCTCGGGATGGCAGAGAGTCCCCGGGCCGAGGCCTaGAGACGGCTGCCGTCCGGGGTCCCAGGAGGCTGC +
Preference number: 3 (lower is better)
Translates to: SLGMAESPRAEA*RRLPSGVPGGC
Trigger: GCAGCCTCCTGGGACCCCGGACGGCAGCCGTCTTCAGGCCTCGGCCCGGGGACTCTCTGCCATCCCGAGAGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560135.5
3UTR GCA 72 bp AGGCTGTCGTCGCTGACCCCGCAGGTCCCGGCCGTCTaGAGCAGGTGCTCAGCCTGGTACACGGCGTGCCGT +
Preference number: 3 (lower is better)
Translates to: RLSSLTPQVPAV*SRCSAWYTACR
Trigger: ACGGCACGCCGTGTACCAGGCTGAGCACCTGCTGCAGACGGCCGGGACCTGCGGGGTCAGCGACGACAGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560135.5
3UTR GCA 72 bp GGATGGAGTCTTTCTGGGGATGCCCCACGTCTGTGCTaGCTGGAACCGGGTGCCCAGGGCAGCCGGCTCAGC +
Preference number: 3 (lower is better)
Translates to: GWSLSGDAPRLC*LEPGAQGSRLS
Trigger: GCTGAGCCGGCTGCCCTGGGCACCCGGTTCCAGGCAGCACAGACGTGGGGCATCCCCAGAAAGACTCCATCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
3UTR GCA 72 bp CTGGGATGGAGTCTTTCTGGGGATGCCCCACGTCTGTaGTGCCTGGAACCGGGTGCCCAGGGCAGCCGGCTC +
Preference number: 3 (lower is better)
Translates to: LGWSLSGDAPRL*CLEPGAQGSRL
Trigger: GAGCCGGCTGCCCTGGGCACCCGGTTCCAGGCAGCACAGACGTGGGGCATCCCCAGAAAGACTCCATCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
3UTR GCA 72 bp TTGTCATGCAGGTGCCGCCGTGTCCGTTGCCGTGCCTaGCAGGTCAGGAGGTTCTCCAGTGTGACACTGGGG +
Preference number: 3 (lower is better)
Translates to: LSCRCRRVRCRA*QVRRFSSVTLG
Trigger: CCCCAGTGTCACACTGGAGAACCTCCTGACCTGGCAGGCACGGCAACGGACACGGCGGCACCTGCATGACAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560135.5
3UTR CCA 72 bp GTGCTGTGGGAGCTCCGGCTCCTTGCTTCCTCTGGATaGGGGGCTTCAGGGCAACCTTTGGGCCAACAGCAC +
Preference number: 3 (lower is better)
Translates to: VLWELRLLASSG*GASGQPLGQQH
Trigger: GTGCTGTTGGCCCAAAGGTTGCCCTGAAGCCCCCCATCCAGAGGAAGCAAGGAGCCGGAGCTCCCACAGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415217.7
3UTR CCA 72 bp CTGGGGCTACACGTGGCCAAGGCGGGGAGAAGGAATTaGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTA +
Preference number: 3 (lower is better)
Translates to: LGLHVAKAGRRN*LRAWTAGASQV
Trigger: TACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAATTCCTTCTCCCCGCCTTGGCCACGTGTAGCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
3UTR GCA 72 bp AGCTGTACGTTGTCATGCAGGTGCCGCCGTGTCCGTTaGCGTGCCTGCCAGGTCAGGAGGTTCTCCAGTGTG +
Preference number: 3 (lower is better)
Translates to: SCTLSCRCRRVR*RACQVRRFSSV
Trigger: CACACTGGAGAACCTCCTGACCTGGCAGGCACGGCAACGGACACGGCGGCACCTGCATGACAACGTACAGCT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560135.5
3UTR CCA 72 bp CACACAGCTCATCCCAGCCTGGTGCCTGCAGACAGCTaGGGCTACACGTGGCCAAGGCGGGGAGAAGGAATT +
Preference number: 3 (lower is better)
Translates to: HTAHPSLVPADS*GYTWPRRGEGI
Trigger: AATTCCTTCTCCCCGCCTTGGCCACGTGTAGCCCCAGCTGTCTGCAGGCACCAGGCTGGGATGAGCTGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
3UTR CCA 72 bp CAGGCCCCAAGATCAGGGGACCTGGAGTCGGGAGCTTaGGGTGCAGTCTGCTCACTGACACCCTCTCGAAGA +
Preference number: 3 (lower is better)
Translates to: QAPRSGDLESGA*GAVCSLTPSRR
Trigger: TCTTCGAGAGGGTGTCAGTGAGCAGACTGCACCCCAAGCTCCCGACTCCAGGTCCCCTGATCTTGGGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
3UTR GCA 72 bp GGTCTAGGGCTGAGCGGCACTAGCTGGACCGTGGAATaGTGGAACGCATGGCTTCTCTGCCGCAACTTCTCC +
Preference number: 3 (lower is better)
Translates to: GLGLSGTSWTVE*WNAWLLCRNFS
Trigger: GGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
3UTR GCA 72 bp TACGTTGTCATGCAGGTGCCGCCGTGTCCGTTGCCGTaGCTGCCAGGTCAGGAGGTTCTCCAGTGTGACACT +
Preference number: 3 (lower is better)
Translates to: YVVMQVPPCPLP*LPGQEVLQCDT
Trigger: AGTGTCACACTGGAGAACCTCCTGACCTGGCAGGCACGGCAACGGACACGGCGGCACCTGCATGACAACGTA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560135.5
3UTR CCA 72 bp GTGGCCAAGGCGGGGAGAAGGAATTGGCTGAGGGCGTaGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTG +
Preference number: 3 (lower is better)
Translates to: VAKAGRRNWLRA*TAGASQVDAFL
Trigger: CAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAATTCCTTCTCCCCGCCTTGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
3UTR TCA 72 bp GTGACACTGGGGTCGGGGCTGACGTGGAACCTGTCCTaGCTATTCCAAATCTCCAGGCCCACCAGGACCACA +
Preference number: 3 (lower is better)
Translates to: VTLGSGLTWNLS*LFQISRPTRTT
Trigger: TGTGGTCCTGGTGGGCCTGGAGATTTGGAATAGTCAGGACAGGTTCCACGTCAGCCCCGACCCCAGTGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560135.5
3UTR GCA 72 bp GTGATTCACCACCTCCAGCACCCGATGACGCACGGCTaGTTCGCTCCCCAGCATCTGGAACTCTGCATTGTC +
Preference number: 3 (lower is better)
Translates to: VIHHLQHPMTHG*FAPQHLELCIV
Trigger: GACAATGCAGAGTTCCAGATGCTGGGGAGCGAAGCAGCCGTGCGTCATCGGGTGCTGGAGGTGGTGAATCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560135.5
3UTR CCA 72 bp CTGCAAAGTCAGGGTCTAGGGCTGAGCGGCACTAGCTaGACCGTGGAATGCTGGAACGCATGGCTTCTCTGC +
Preference number: 3 (lower is better)
Translates to: LQSQGLGLSGTS*TVECWNAWLLC
Trigger: GCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTGACTTTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
3UTR CCA 72 bp CTAGGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTaGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAA +
Preference number: 3 (lower is better)
Translates to: LGLSGTSWTVEC*NAWLLCRNFSK
Trigger: TTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
3UTR GCA 72 bp AGCTGGACCGTGGAATGCTGGAACGCATGGCTTCTCTaGCGCAACTTCTCCAAATTTCCACACAGGCGCAGG +
Preference number: 3 (lower is better)
Translates to: SWTVECWNAWLL*RNFSKFPHRRR
Trigger: CCTGCGCCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
3UTR CCA 72 bp AGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATaGCTTCTCTGCCGCAACTTCTCCAAATTTCCACAC +
Preference number: 3 (lower is better)
Translates to: SGTSWTVECWNA*LLCRNFSKFPH
Trigger: GTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
3UTR TCA 72 bp TCCAAATCTCCAGGCCCACCAGGACCACACGGAAGTTaGGTTTCTGATATAGCTTGTCCACGTGATTCACCA +
Preference number: 3 (lower is better)
Translates to: SKSPGPPGPHGS*VSDIACPRDSP
Trigger: TGGTGAATCACGTGGACAAGCTATATCAGAAACTCAACTTCCGTGTGGTCCTGGTGGGCCTGGAGATTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560135.5
CDS-3UTR TCA 90 bp CGTCTGCAGCAGGTGCTCAGCCTGGTACACGGCGTGCCGTCCGCCCTCGCCACCCCAGGCTGTCGTCGCTaGCCCCGCAGGTCCCGGCCG +
Preference number: 4 (lower is better)
Translates to: RLQQVLSLVHGVPSALATPGCRR*PRRSRP
Trigger: CGGCCGGGACCTGCGGGGTCAGCGACGACAGCCTGG...GGTGGCGAGGGCGGACGGCACGCCGTGTACCAGGCTGAGCACCTGCTGCAGACG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560135.5
CDS-3UTR CCA 90 bp GTCCCCGGGCCGAGGCCTGAAGACGGCTGCCGTCCGGGGTCCCAGGAGGCTGCCAGCAGGTGCTCAGCCTaGTACACGGCGTGCCGTCCG +
Preference number: 4 (lower is better)
Translates to: VPGPRPEDGCRPGSQEAASRCSA*YTACRP
Trigger: CGGACGGCACGCCGTGTACCAGGCTGAGCACCTGCT...GGCAGCCTCCTGGGACCCCGGACGGCAGCCGTCTTCAGGCCTCGGCCCGGGGAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560135.5
CDS-3UTR CCA 90 bp GCAGGTCCCGGCCGTCTGCAGCAGGTGCTCAGCCTGGTACACGGCGTGCCGTCCGCGGGTCTCTCGGGATaGCAGAGAGTCCCCGGGCCG +
Preference number: 4 (lower is better)
Translates to: AGPGRLQQVLSLVHGVPSAGLSG*QRVPGP
Trigger: CGGCCCGGGGACTCTCTGCCATCCCGAGAGACCCGC...GGACGGCACGCCGTGTACCAGGCTGAGCACCTGCTGCAGACGGCCGGGACCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560135.5
CDS-3UTR CCA 90 bp CAGCTGGGGCTACACGTGGCCAAGGCGGGGAGAAGGAATTGGCTGAGGGCGTGGGCGGGCTGGCCCGGGTaGGTGGTGGGGACCAGCTCT +
Preference number: 4 (lower is better)
Translates to: QLGLHVAKAGRRNWLRAWAGWPG*VVGTSS
Trigger: AGAGCTGGTCCCCACCACCCACCCGGGCCAGCCCGC...CCACGCCCTCAGCCAATTCCTTCTCCCCGCCTTGGCCACGTGTAGCCCCAGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR TCA 90 bp CAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATGGCCAGGCTGTCGTCGCTaGCCCCGCAGGTCCCGGCCG +
Preference number: 4 (lower is better)
Translates to: QGLGLSGTSWTVECWNAWPGCRR*PRRSRP
Trigger: CGGCCGGGACCTGCGGGGTCAGCGACGACAGCCTGG...CCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp CACATACAGCTCCACGTAGCGGGTCTCTCGGGATGGCAGAGAGTCCCCGGGCCGGCCTGGTACACGGCGTaGCGTCCGCCCTCGCCACCT +
Preference number: 4 (lower is better)
Translates to: HIQLHVAGLSGWQRVPGPAWYTA*RPPSPP
Trigger: AGGTGGCGAGGGCGGACGGCACGCCGTGTACCAGGC...CGGCCCGGGGACTCTCTGCCATCCCGAGAGACCCGCTACGTGGAGCTGTATGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560135.5
CDS-3UTR TCA 90 bp TGGGATGGAGTCTTTCTGGGGATGCCCCACGTCTGTGCTGCCTGGAACCGGGTGGGCCGGCACAGGTGCTaGGGCTGGCGGCTGAGTCCG +
Preference number: 4 (lower is better)
Translates to: WDGVFLGMPHVCAAWNRVGRHRC*GWRLSP
Trigger: CGGACTCAGCCGCCAGCCTCAGCACCTGTGCCGGCC...CACCCGGTTCCAGGCAGCACAGACGTGGGGCATCCCCAGAAAGACTCCATCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR TCA 90 bp ATGTGGCCTCCTGAACACAGCGGGAGACCAGCGGCCACCTGGAGACACGTACACGAGCAGAGGCGGAGGTaGCAGCCCCGCGGGACACGG +
Preference number: 4 (lower is better)
Translates to: MWPPEHSGRPAATWRHVHEQRRR*QPRGTR
Trigger: CCGTGTCCCGCGGGGCTGTCACCTCCGCCTCTGCTC...GTGTACGTGTCTCCAGGTGGCCGCTGGTCTCCCGCTGTGTTCAGGAGGCCACAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445355.8
CDS-3UTR TCA 90 bp CAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATGGGAGCAGAGGCGGAGGTaGCAGCCCCGCGGGACACGG +
Preference number: 4 (lower is better)
Translates to: QGLGLSGTSWTVECWNAWEQRRR*QPRGTR
Trigger: CCGTGTCCCGCGGGGCTGTCACCTCCGCCTCTGCTC...CCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp GCCTGCCAGGTCAGGAGGTTCTCCAGTGTGACACTGGGGTCGGGGCTGACGTGGCAGGTCCCGGCCGTCTaGAGCAGGTGCTCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: ACQVRRFSSVTLGSGLTWQVPAV*SRCSAW
Trigger: CCAGGCTGAGCACCTGCTGCAGACGGCCGGGACCTG...CCACGTCAGCCCCGACCCCAGTGTCACACTGGAGAACCTCCTGACCTGGCAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560135.5
CDS-3UTR GCA 90 bp GGCTGGGAGGGGCTGTATATGTGGCCTCCTGAACACAGCGGGAGACCAGCGGCCTGCCGCCGTGTCCGTTaGCGTGCCTGCCAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: GWEGLYMWPPEHSGRPAACRRVR*RACQVR
Trigger: CCTGACCTGGCAGGCACGGCAACGGACACGGCGGCA...GGCCGCTGGTCTCCCGCTGTGTTCAGGAGGCCACATATACAGCCCCTCCCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR GCA 90 bp CAGCGGGAGACCAGCGGCCACCTGGAGACACGTACACACACACGCACCCGCAAGCCCCGGAGCAGGGCGTaGCGTTCTCCTGGAAGGCGT +
Preference number: 4 (lower is better)
Translates to: QRETSGHLETRTHTRTRKPRSRA*RSPGRR
Trigger: ACGCCTTCCAGGAGAACGGCACGCCCTGCTCCGGGG...CTTGCGGGTGCGTGTGTGTGTACGTGTCTCCAGGTGGCCGCTGGTCTCCCGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR GCA 90 bp CAGGCTGTCGTCGCTGACCCCGCAGGTCCCGGCCGTCTGCAGCAGGTGCTCAGCCTCACCCTCTCTGGGTaGAGGCCCAGGCAGCATCAT +
Preference number: 4 (lower is better)
Translates to: QAVVADPAGPGRLQQVLSLTLSG*RPRQHH
Trigger: ATGATGCTGCCTGGGCCTGCACCCAGAGAGGGTGAG...GCTGAGCACCTGCTGCAGACGGCCGGGACCTGCGGGGTCAGCGACGACAGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560135.5
CDS-3UTR CCA 90 bp CACACACGCACCCGCAAGCACACAGCTCATCCCAGCCTGGTGCCTGCAGACAGCTGGCCGGCACGCGGCTaGCAGCCTGCGTGCACCTCA +
Preference number: 4 (lower is better)
Translates to: HTRTRKHTAHPSLVPADSWPARG*QPACTS
Trigger: TGAGGTGCACGCAGGCTGCCAGCCGCGTGCCGGCCA...GCTGTCTGCAGGCACCAGGCTGGGATGAGCTGTGTGCTTGCGGGTGCGTGTGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415217.7
CDS-3UTR CCA 90 bp GGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCGGCCCGGGTGGGTGGTaGGGACCAGCTCTTGGGGGC +
Preference number: 4 (lower is better)
Translates to: GLSGTSWTVECWNAWLLCGPGGW*GPALGG
Trigger: GCCCCCAAGAGCTGGTCCCCACCACCCACCCGGGCC...GCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp CTGAGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCGCGGGCTGGCCCGGGTaGGTGGTGGGGACCAGCTCT +
Preference number: 4 (lower is better)
Translates to: LSGTSWTVECWNAWLLCRAGWPG*VVGTSS
Trigger: AGAGCTGGTCCCCACCACCCACCCGGGCCAGCCCGC...GCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR TCA 90 bp CTTGTCCACGTGATTCACCACCTCCAGCACCCGATGACGCACGGCTGCTTCGCTGGCCGGCACAGGTGCTaGGGCTGGCGGCTGAGTCCG +
Preference number: 4 (lower is better)
Translates to: LVHVIHHLQHPMTHGCFAGRHRC*GWRLSP
Trigger: CGGACTCAGCCGCCAGCCTCAGCACCTGTGCCGGCC...AGCGAAGCAGCCGTGCGTCATCGGGTGCTGGAGGTGGTGAATCACGTGGACAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560135.5
CDS-3UTR TCA 90 bp CTGAGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCCGCCCACCAGGTGGCTaGGGTCAGGGGCGTTGGCGA +
Preference number: 4 (lower is better)
Translates to: LSGTSWTVECWNAWLLCRRPPGG*GQGRWR
Trigger: TCGCCAACGCCCCTGACCTCAGCCACCTGGTGGGCG...GCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp GGCTGGGAGGGGCTGTATATGTGGCCTCCTGAACACAGCGGGAGACCAGCGGCCGCCGTCTGCAGCAGGTaGTCAGCCTGGTACACGGCG +
Preference number: 4 (lower is better)
Translates to: GWEGLYMWPPEHSGRPAAAVCSR*SAWYTA
Trigger: CGCCGTGTACCAGGCTGAGCACCTGCTGCAGACGGC...GGCCGCTGGTCTCCCGCTGTGTTCAGGAGGCCACATATACAGCCCCTCCCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR GCA 90 bp CAGGCTGTCGTCGCTGACCCCGCAGGTCCCGGCCGTCTGCAGCAGGTGCTCAGCAGCTGTACGTTGTCATaGAGGTGCCGCCGTGTCCGT +
Preference number: 4 (lower is better)
Translates to: QAVVADPAGPGRLQQVLSSCTLS*RCRRVR
Trigger: ACGGACACGGCGGCACCTGCATGACAACGTACAGCT...GCTGAGCACCTGCTGCAGACGGCCGGGACCTGCGGGGTCAGCGACGACAGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560135.5
CDS-3UTR GCA 90 bp GGCTGGGAGGGGCTGTATATGTGGCCTCCTGAACACAGCGGGAGACCAGCGGCCTGGCAGCAGGTACCGTaGGCACACTGGGCCCCCTCA +
Preference number: 4 (lower is better)
Translates to: GWEGLYMWPPEHSGRPAAWQQVP*AHWAPS
Trigger: TGAGGGGGCCCAGTGTGCGCACGGTACCTGCTGCCA...GGCCGCTGGTCTCCCGCTGTGTTCAGGAGGCCACATATACAGCCCCTCCCAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR GCA 90 bp CTGCTCACTGACACCCTCTCGAAGAGCACGCAGGGGAACCTGGTCCTGGGATGGCTGCCTGGAACCGGGTaGCCAGGGCAGCCGGCTCAG +
Preference number: 4 (lower is better)
Translates to: LLTDTLSKSTQGNLVLGWLPGTG*PGQPAQ
Trigger: CTGAGCCGGCTGCCCTGGGCACCCGGTTCCAGGCAG...CCATCCCAGGACCAGGTTCCCCTGCGTGCTCTTCGAGAGGGTGTCAGTGAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp TGGGATGGAGTCTTTCTGGGGATGCCCCACGTCTGTGCTGCCTGGAACCGGGTGGCGGACTCGGGGGCCTaGCAGACGCCACGGCAACAC +
Preference number: 4 (lower is better)
Translates to: WDGVFLGMPHVCAAWNRVADSGA*QTPRQH
Trigger: GTGTTGCCGTGGCGTCTGCCAGGCCCCCGAGTCCGC...CACCCGGTTCCAGGCAGCACAGACGTGGGGCATCCCCAGAAAGACTCCATCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp GGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCGCGGGTCTCTCGGGATaGCAGAGAGTCCCCGGGCCG +
Preference number: 4 (lower is better)
Translates to: GLSGTSWTVECWNAWLLCAGLSG*QRVPGP
Trigger: CGGCCCGGGGACTCTCTGCCATCCCGAGAGACCCGC...GCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp TGGGATGGAGTCTTTCTGGGGATGCCCCACGTCTGTGCTGCCTGGAACCGGGTGGGGCCGCCCACCAGGTaGCTGAGGTCAGGGGCGTTG +
Preference number: 4 (lower is better)
Translates to: WDGVFLGMPHVCAAWNRVGPPTR*LRSGAL
Trigger: CAACGCCCCTGACCTCAGCCACCTGGTGGGCGGCCC...CACCCGGTTCCAGGCAGCACAGACGTGGGGCATCCCCAGAAAGACTCCATCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp CAGCAGCTGAGCCTGCAAAGTCAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCGGGGCCCAGCCCGCGTaGCAGTGGCACTCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: QQLSLQSQGLGLSGTSWTGAQPA*QWHSCL
Trigger: CAAGCAGGAGTGCCACTGCCACGCGGGCTGGGCCCC...GGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTGACTTTGCAGGCTCAGCTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp CACACACGCACCCGCAAGCACACAGCTCATCCCAGCCTGGTGCCTGCAGACAGCCAGCTGGACCAGGGTTaGCCGCACCAGCCCCGGGTT +
Preference number: 4 (lower is better)
Translates to: HTRTRKHTAHPSLVPADSQLDQG*PHQPRV
Trigger: AACCCGGGGCTGGTGCGGCCAACCCTGGTCCAGCTG...GCTGTCTGCAGGCACCAGGCTGGGATGAGCTGTGTGCTTGCGGGTGCGTGTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR TCA 90 bp CTGCTCACTGACACCCTCTCGAAGAGCACGCAGGGGAACCTGGTCCTGGGATGGCCTCATACTGCTCCATaGGGGCCCAGGGCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: LLTDTLSKSTQGNLVLGWPHTAP*GPRAGW
Trigger: CCAGCCGGCCCTGGGCCCTCATGGAGCAGTATGAGG...CCATCCCAGGACCAGGTTCCCCTGCGTGCTCTTCGAGAGGGTGTCAGTGAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR TCA 90 bp ATGTGGCCTCCTGAACACAGCGGGAGACCAGCGGCCACCTGGAGACACGTACACCCTCATACTGCTCCATaGGGGCCCAGGGCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: MWPPEHSGRPAATWRHVHPHTAP*GPRAGW
Trigger: CCAGCCGGCCCTGGGCCCTCATGGAGCAGTATGAGG...GTGTACGTGTCTCCAGGTGGCCGCTGGTCTCCCGCTGTGTTCAGGAGGCCACAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR TCA 90 bp CGACCACATACAGCTCCACGTAGCGGGTCTCTCGGGATGGCAGAGAGTCCCCGGTCCGCAGGTGGAGGGTaGAGTTGTGCCCTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: RPHTAPRSGSLGMAESPRSAGGG*SCALWP
Trigger: GGGCCACAGGGCACAACTTCACCCTCCACCTGCGGA...CCGGGGACTCTCTGCCATCCCGAGAGACCCGCTACGTGGAGCTGTATGTGGTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560135.5
CDS-3UTR TCA 90 bp TGCAGACAGCTGGGGCTACACGTGGCCAAGGCGGGGAGAAGGAATTGGCTGAGGGCTGAGGCTGGCGGCTaGGTCCGGGTACCCCTCTAC +
Preference number: 4 (lower is better)
Translates to: CRQLGLHVAKAGRRNWLRAEAGG*VRVPLY
Trigger: GTAGAGGGGTACCCGGACTCAGCCGCCAGCCTCAGC...CCTCAGCCAATTCCTTCTCCCCGCCTTGGCCACGTGTAGCCCCAGCTGTCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR TCA 90 bp CAGGAGGTTCTCCAGTGTGACACTGGGGTCGGGGCTGACGTGGAACCTGTCCTGGCTGAGGCTGGCGGCTaGGTCCGGGTACCCCTCTAC +
Preference number: 4 (lower is better)
Translates to: QEVLQCDTGVGADVEPVLAEAGG*VRVPLY
Trigger: GTAGAGGGGTACCCGGACTCAGCCGCCAGCCTCAGC...CAGGACAGGTTCCACGTCAGCCCCGACCCCAGTGTCACACTGGAGAACCTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560135.5
CDS-3UTR TCA 90 bp ACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGCGCAGGTGCCCCAGGCTGTCGTCGCTaGCCCCGCAGGTCCCGGCCG +
Preference number: 4 (lower is better)
Translates to: THGFSAATSPNFHTGAGAPGCRR*PRRSRP
Trigger: CGGCCGGGACCTGCGGGGTCAGCGACGACAGCCTGG...GGCACCTGCGCCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR TCA 90 bp AGAGTCCCCGGGCCGAGGCCTGAAGACGGCTGCCGTCCGGGGTCCCAGGAGGCTTATAGCTTGTCCACGTaGTTCACCACCTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: RVPGPRPEDGCRPGSQEAYSLST*FTTSST
Trigger: GGTGCTGGAGGTGGTGAATCACGTGGACAAGCTATA...AGCCTCCTGGGACCCCGGACGGCAGCCGTCTTCAGGCCTCGGCCCGGGGACTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560135.5
CDS-3UTR GCA 90 bp CTGCAAAGTCAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGGCCTGGTACACGGCGTaGCGTCCGCCCTCGCCACCT +
Preference number: 4 (lower is better)
Translates to: LQSQGLGLSGTSWTVECWAWYTA*RPPSPP
Trigger: AGGTGGCGAGGGCGGACGGCACGCCGTGTACCAGGC...CCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTGACTTTGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp CCTGAACACAGCGGGAGACCAGCGGCCACCTGGAGACACGTACACACACACGCATGCCGCCGTGTCCGTTaGCGTGCCTGCCAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: PEHSGRPAATWRHVHTHACRRVR*RACQVR
Trigger: CCTGACCTGGCAGGCACGGCAACGGACACGGCGGCA...TGCGTGTGTGTGTACGTGTCTCCAGGTGGCCGCTGGTCTCCCGCTGTGTTCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR GCA 90 bp CACACACGCACCCGCAAGCACACAGCTCATCCCAGCCTGGTGCCTGCAGACAGCGGGCCGCAGTCGCACTaGTCCCCACGCTCCACAAAC +
Preference number: 4 (lower is better)
Translates to: HTRTRKHTAHPSLVPADSGPQSH*SPRSTN
Trigger: GTTTGTGGAGCGTGGGGAGCAGTGCGACTGCGGCCC...GCTGTCTGCAGGCACCAGGCTGGGATGAGCTGTGTGCTTGCGGGTGCGTGTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR GCA 90 bp CTAGGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATGGCTTCTCGCACGCCCCAGGGGCTaGTGCCCACCCTTGCACTGC +
Preference number: 4 (lower is better)
Translates to: LGLSGTSWTVECWNAWLLARPRG*CPPLHC
Trigger: GCAGTGCAAGGGTGGGCAGCAGCCCCTGGGGCGTGC...GAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp GTCCTGGGATGGAGTCTTTCTGGGGATGCCCCACGTCTGTGCTGCCTGGAACCGCCACACAGGCGCAGGTaGCCCCCTAGGGTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: VLGWSLSGDAPRLCCLEPPHRRR*PPRVLW
Trigger: CCACAGCACCCTAGGGGGGCACCTGCGCCTGTGTGG...CGGTTCCAGGCAGCACAGACGTGGGGCATCCCCAGAAAGACTCCATCCCAGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR GCA 90 bp AACCTGGTCCTGGGATGGAGTCTTTCTGGGGATGCCCCACGTCTGTGCTGCCTGCTGCCTGGAACCGGGTaGCCAGGGCAGCCGGCTCAG +
Preference number: 4 (lower is better)
Translates to: NLVLGWSLSGDAPRLCCLLPGTG*PGQPAQ
Trigger: CTGAGCCGGCTGCCCTGGGCACCCGGTTCCAGGCAG...CAGGCAGCACAGACGTGGGGCATCCCCAGAAAGACTCCATCCCAGGACCAGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR GCA 90 bp GGAACCTGGTCCTGGGATGGAGTCTTTCTGGGGATGCCCCACGTCTGTGCTGCCGCCCCACGTCTGTGCTaGCTGGAACCGGGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: GTWSWDGVFLGMPHVCAAAPRLC*LEPGAQ
Trigger: CTGGGCACCCGGTTCCAGGCAGCACAGACGTGGGGC...GGCAGCACAGACGTGGGGCATCCCCAGAAAGACTCCATCCCAGGACCAGGTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp GCAGGTCCCGGCCGTCTGCAGCAGGTGCTCAGCCTGGTACACGGCGTGCCGTCCTCACCTCGGAGCCATTaGCAGCCGTATAGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: AGPGRLQQVLSLVHGVPSSPRSH*QPYRSL
Trigger: CAGAGACCTATACGGCTGCCAATGGCTCCGAGGTGA...GGACGGCACGCCGTGTACCAGGCTGAGCACCTGCTGCAGACGGCCGGGACCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560135.5
CDS-3UTR CCA 90 bp CAGCTGGGGCTACACGTGGCCAAGGCGGGGAGAAGGAATTGGCTGAGGGCGTGGACAGCCCCTGAGCTGTaGGAGCACATGGCGGACACC +
Preference number: 4 (lower is better)
Translates to: QLGLHVAKAGRRNWLRAWTAPEL*EHMADT
Trigger: GGTGTCCGCCATGTGCTCCCACAGCTCAGGGGCTGT...CCACGCCCTCAGCCAATTCCTTCTCCCCGCCTTGGCCACGTGTAGCCCCAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp TCACTGACACCCTCTCGAAGAGCACGCAGGGGAACCTGGTCCTGGGATGGAGTCGGGCCGCCCACCAGGTaGCTGAGGTCAGGGGCGTTG +
Preference number: 4 (lower is better)
Translates to: SLTPSRRARRGTWSWDGVGPPTR*LRSGAL
Trigger: CAACGCCCCTGACCTCAGCCACCTGGTGGGCGGCCC...GACTCCATCCCAGGACCAGGTTCCCCTGCGTGCTCTTCGAGAGGGTGTCAGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp TGCAGACAGCTGGGGCTACACGTGGCCAAGGCGGGGAGAAGGAATTGGCTGAGGGTACCGTGCGCACACTaGGCCCCCTCAGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: CRQLGLHVAKAGRRNWLRVPCAH*APSASW
Trigger: CCAGCTGGCTGAGGGGGCCCAGTGTGCGCACGGTAC...CCTCAGCCAATTCCTTCTCCCCGCCTTGGCCACGTGTAGCCCCAGCTGTCTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp AGTCAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCAGGCAGCCTGCCCACCTaGCCCCCAGAAGGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: SQGLGLSGTSWTVECWNAGSLPT*PPEGLA
Trigger: TGCCAGGCCTTCTGGGGGCCAGGTGGGCAGGCTGCC...TGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp CTGCAAAGTCAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGGGGGCCCAGCCCGCGTaGCAGTGGCACTCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: LQSQGLGLSGTSWTVECWGAQPA*QWHSCL
Trigger: CAAGCAGGAGTGCCACTGCCACGCGGGCTGGGCCCC...CCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTGACTTTGCAG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp AGTCAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCAGGGGCCCAGCCCGCGTaGCAGTGGCACTCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: SQGLGLSGTSWTVECWNAGAQPA*QWHSCL
Trigger: CAAGCAGGAGTGCCACTGCCACGCGGGCTGGGCCCC...TGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp ACTGACACCCTCTCGAAGAGCACGCAGGGGAACCTGGTCCTGGGATGGAGTCTTGGCCCGGGTGGGTGGTaGGGACCAGCTCTTGGGGGC +
Preference number: 4 (lower is better)
Translates to: TDTLSKSTQGNLVLGWSLGPGGW*GPALGG
Trigger: GCCCCCAAGAGCTGGTCCCCACCACCCACCCGGGCC...AAGACTCCATCCCAGGACCAGGTTCCCCTGCGTGCTCTTCGAGAGGGTGTCAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR TCA 90 bp GGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCTCCGCAGGTGGAGGGTaGAGTTGTGCCCTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: GLSGTSWTVECWNAWLLCSAGGG*SCALWP
Trigger: GGGCCACAGGGCACAACTTCACCCTCCACCTGCGGA...GCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR TCA 90 bp GAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGAGGTTAGAACACCAGGCTGTCGTCGCTaGCCCCGCAGGTCCCGGCCG +
Preference number: 4 (lower is better)
Translates to: EGVDSRSLSGRCIPEVRTPGCRR*PRRSRP
Trigger: CGGCCGGGACCTGCGGGGTCAGCGACGACAGCCTGG...TGTTCTAACCTCAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR TCA 90 bp TGGGATGGAGTCTTTCTGGGGATGCCCCACGTCTGTGCTGCCTGGAACCGGGTGCACTGGGGTCGGGGCTaGCGTGGAACCTGTCCTGAC +
Preference number: 4 (lower is better)
Translates to: WDGVFLGMPHVCAAWNRVHWGRG*RGTCPD
Trigger: GTCAGGACAGGTTCCACGTCAGCCCCGACCCCAGTG...CACCCGGTTCCAGGCAGCACAGACGTGGGGCATCCCCAGAAAGACTCCATCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR TCA 90 bp GCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGCGCAGGTGCCCCCGCCCACCAGGTGGCTaGGGTCAGGGGCGTTGGCGA +
Preference number: 4 (lower is better)
Translates to: AWLLCRNFSKFPHRRRCPRPPGG*GQGRWR
Trigger: TCGCCAACGCCCCTGACCTCAGCCACCTGGTGGGCG...GGGGCACCTGCGCCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp ATGTGGCCTCCTGAACACAGCGGGAGACCAGCGGCCACCTGGAGACACGTACACCTCACCCTCTCTGGGTaGAGGCCCAAGTGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: MWPPEHSGRPAATWRHVHLTLSG*RPKWEG
Trigger: GCCCTCCCACTTGGGCCTGCACCCAGAGAGGGTGAG...GTGTACGTGTCTCCAGGTGGCCGCTGGTCTCCCGCTGTGTTCAGGAGGCCACAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR GCA 90 bp CACACACGCACCCGCAAGCACACAGCTCATCCCAGCCTGGTGCCTGCAGACAGCAGGGGCTCGATCAGGTaGAGGTCTGACCCCACCTGG +
Preference number: 4 (lower is better)
Translates to: HTRTRKHTAHPSLVPADSRGSIR*RSDPTW
Trigger: CCAGGTGGGGTCAGACCTGCACCTGATCGAGCCCCT...GCTGTCTGCAGGCACCAGGCTGGGATGAGCTGTGTGCTTGCGGGTGCGTGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR GCA 90 bp GAACCTGGTCCTGGGATGGAGTCTTTCTGGGGATGCCCCACGTCTGTGCTGCCTAGGCCTGAAGACGGCTaGCGTCCGGGGTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: EPGPGMESFWGCPTSVLPRPEDG*RPGSQE
Trigger: CTCCTGGGACCCCGGACGGCAGCCGTCTTCAGGCCT...AGGCAGCACAGACGTGGGGCATCCCCAGAAAGACTCCATCCCAGGACCAGGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR GCA 90 bp CTTGTCCACGTGATTCACCACCTCCAGCACCCGATGACGCACGGCTGCTTCGCTAGGCCTGAAGACGGCTaGCGTCCGGGGTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: LVHVIHHLQHPMTHGCFARPEDG*RPGSQE
Trigger: CTCCTGGGACCCCGGACGGCAGCCGTCTTCAGGCCT...AGCGAAGCAGCCGTGCGTCATCGGGTGCTGGAGGTGGTGAATCACGTGGACAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560135.5
CDS-3UTR GCA 90 bp GTCCTGGGATGGAGTCTTTCTGGGGATGCCCCACGTCTGTGCTGCCTGGAACCGGGGCCGCAGTCGCACTaGTCCCCACGCTCCACAAAC +
Preference number: 4 (lower is better)
Translates to: VLGWSLSGDAPRLCCLEPGPQSH*SPRSTN
Trigger: GTTTGTGGAGCGTGGGGAGCAGTGCGACTGCGGCCC...CGGTTCCAGGCAGCACAGACGTGGGGCATCCCCAGAAAGACTCCATCCCAGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR GCA 90 bp CTGAGCCTGCAAAGTCAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCGTGGAACCCCGGAGCAGGGCGTaGCGTTCTCCTGGAAGGCGT +
Preference number: 4 (lower is better)
Translates to: LSLQSQGLGLSGTSWTVEPRSRA*RSPGRR
Trigger: ACGCCTTCCAGGAGAACGGCACGCCCTGCTCCGGGG...TTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTGACTTTGCAGGCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp GAATTGGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGAGGGGCCCAGGGCCGGCTaGGGGCAATCGCAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: ELAEGVDSRSLSGRCIPEGPRAG*GQSQAA
Trigger: TGCTGCCTGCGATTGCCCCCAGCCGGCCCTGGGCCC...CTCAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp CTAGCTGGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAGGGCCCAGGGCCGGCTaGGGGCAATCGCAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: LAGPWNAGTHGFSAATSPGPRAG*GQSQAA
Trigger: TGCTGCCTGCGATTGCCCCCAGCCGGCCCTGGGCCC...TGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp TGGCCTCCTGAACACAGCGGGAGACCAGCGGCCACCTGGAGACACGTACACACAAGCAGGTGCTCAGCCTaGTACACGGCGTGCCGTCCG +
Preference number: 4 (lower is better)
Translates to: WPPEHSGRPAATWRHVHTSRCSA*YTACRP
Trigger: CGGACGGCACGCCGTGTACCAGGCTGAGCACCTGCT...TGTGTGTACGTGTCTCCAGGTGGCCGCTGGTCTCCCGCTGTGTTCAGGAGGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp GGCTGGGAGGGGCTGTATATGTGGCCTCCTGAACACAGCGGGAGACCAGCGGCCAGCTGTGGGAGCACATaGCGGACACCCTGGCAAACC +
Preference number: 4 (lower is better)
Translates to: GWEGLYMWPPEHSGRPAASCGST*RTPWQT
Trigger: GGTTTGCCAGGGTGTCCGCCATGTGCTCCCACAGCT...GGCCGCTGGTCTCCCGCTGTGTTCAGGAGGCCACATATACAGCCCCTCCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp CTAGGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATGGCTTCTCGTACCGTGCGCACACTaGGCCCCCTCAGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LGLSGTSWTVECWNAWLLVPCAH*APSASW
Trigger: CCAGCTGGCTGAGGGGGCCCAGTGTGCGCACGGTAC...GAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp AGTCAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCAGGCCCCCAGAAGGCCTaGCACTGCTGGGCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: SQGLGLSGTSWTVECWNAGPQKA*HCWASV
Trigger: CACACTGGCCCAGCAGTGCCAGGCCTTCTGGGGGCC...TGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp CTGAGCCTGCAAAGTCAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCGTGGAAGGCCCCCAGAAGGCCTaGCACTGCTGGGCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: LSLQSQGLGLSGTSWTVEGPQKA*HCWASV
Trigger: CACACTGGCCCAGCAGTGCCAGGCCTTCTGGGGGCC...TTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTGACTTTGCAGGCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp ACTGACACCCTCTCGAAGAGCACGCAGGGGAACCTGGTCCTGGGATGGAGTCTTGGCAGCCTGCCCACCTaGCCCCCAGAAGGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: TDTLSKSTQGNLVLGWSLGSLPT*PPEGLA
Trigger: TGCCAGGCCTTCTGGGGGCCAGGTGGGCAGGCTGCC...AAGACTCCATCCCAGGACCAGGTTCCCCTGCGTGCTCTTCGAGAGGGTGTCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp CTAGCTGGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAGGCCCGGGTGGGTGGTaGGGACCAGCTCTTGGGGGC +
Preference number: 4 (lower is better)
Translates to: LAGPWNAGTHGFSAATSPGPGGW*GPALGG
Trigger: GCCCCCAAGAGCTGGTCCCCACCACCCACCCGGGCC...TGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp AGGAATTGGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGGCGGGCTGGCCCGGGTaGGTGGTGGGGACCAGCTCT +
Preference number: 4 (lower is better)
Translates to: RNWLRAWTAGASQVDAFLAGWPG*VVGTSS
Trigger: AGAGCTGGTCCCCACCACCCACCCGGGCCAGCCCGC...CAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAATTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp CAGCTGGGGCTACACGTGGCCAAGGCGGGGAGAAGGAATTGGCTGAGGGCGTGGCTGGAGTCGGGAGCTTaGGGTGCAGTCTGCTCACTG +
Preference number: 4 (lower is better)
Translates to: QLGLHVAKAGRRNWLRAWLESGA*GAVCSL
Trigger: CAGTGAGCAGACTGCACCCCAAGCTCCCGACTCCAG...CCACGCCCTCAGCCAATTCCTTCTCCCCGCCTTGGCCACGTGTAGCCCCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp AATCCCATGGGAAACAGGCCCCAAGATCAGGGGACCTGGAGTCGGGAGCTTGGGCGGCTGGCAGCCTGGTaGAACAGGGGGTTGGAGCGC +
Preference number: 4 (lower is better)
Translates to: NPMGNRPQDQGTWSRELGRLAAW*NRGLER
Trigger: GCGCTCCAACCCCCTGTTCCACCAGGCTGCCAGCCG...CCCAAGCTCCCGACTCCAGGTCCCCTGATCTTGGGGCCTGTTTCCCATGGGATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000445355.8
CDS-3UTR TCA 90 bp CTGAGCCTGCAAAGTCAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCGTGGAATCCGCAGGTGGAGGGTaGAGTTGTGCCCTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: LSLQSQGLGLSGTSWTVESAGGG*SCALWP
Trigger: GGGCCACAGGGCACAACTTCACCCTCCACCTGCGGA...TTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTGACTTTGCAGGCTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR TCA 90 bp GAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGAGGTTAGAACAGGCCGGCACAGGTGCTaGGGCTGGCGGCTGAGTCCG +
Preference number: 4 (lower is better)
Translates to: EGVDSRSLSGRCIPEVRTGRHRC*GWRLSP
Trigger: CGGACTCAGCCGCCAGCCTCAGCACCTGTGCCGGCC...TGTTCTAACCTCAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR TCA 90 bp ATGTGGCCTCCTGAACACAGCGGGAGACCAGCGGCCACCTGGAGACACGTACACCTGGTTCACAGCCCCTaGGCTGTGGGAGCACATGGC +
Preference number: 4 (lower is better)
Translates to: MWPPEHSGRPAATWRHVHLVHSP*AVGAHG
Trigger: GCCATGTGCTCCCACAGCTCAGGGGCTGTGAACCAG...GTGTACGTGTCTCCAGGTGGCCGCTGGTCTCCCGCTGTGTTCAGGAGGCCACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR TCA 90 bp GGCTGGGAGGGGCTGTATATGTGGCCTCCTGAACACAGCGGGAGACCAGCGGCCCCTGGCTGCAGTCACTaGACATCCTGGGGAAACTGG +
Preference number: 4 (lower is better)
Translates to: GWEGLYMWPPEHSGRPAAPGCSH*TSWGNW
Trigger: CCAGTTTCCCCAGGATGTTCAGTGACTGCAGCCAGG...GGCCGCTGGTCTCCCGCTGTGTTCAGGAGGCCACATATACAGCCCCTCCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR TCA 90 bp AGGAATTGGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGCGCCCACCAGGTGGCTaGGGTCAGGGGCGTTGGCGA +
Preference number: 4 (lower is better)
Translates to: RNWLRAWTAGASQVDAFLRPPGG*GQGRWR
Trigger: TCGCCAACGCCCCTGACCTCAGCCACCTGGTGGGCG...CAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAATTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp AGTCAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCACTCACCCTCTCTGGGTaGAGGCCCAAGTGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: SQGLGLSGTSWTVECWNALTLSG*RPKWEG
Trigger: GCCCTCCCACTTGGGCCTGCACCCAGAGAGGGTGAG...TGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTGACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR GCA 90 bp CAGGAGGTTCTCCAGTGTGACACTGGGGTCGGGGCTGACGTGGAACCTGTCCTGAGGGGCTCGATCAGGTaGAGGTCTGACCCCACCTGG +
Preference number: 4 (lower is better)
Translates to: QEVLQCDTGVGADVEPVLRGSIR*RSDPTW
Trigger: CCAGGTGGGGTCAGACCTGCACCTGATCGAGCCCCT...CAGGACAGGTTCCACGTCAGCCCCGACCCCAGTGTCACACTGGAGAACCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000560135.5
CDS-3UTR GCA 90 bp CTGAGCCTGCAAAGTCAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCGTGGAAGCCGTCTGCAGCAGGTaGTCAGCCTGGTACACGGCG +
Preference number: 4 (lower is better)
Translates to: LSLQSQGLGLSGTSWTVEAVCSR*SAWYTA
Trigger: CGCCGTGTACCAGGCTGAGCACCTGCTGCAGACGGC...TTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTGACTTTGCAGGCTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp CTGCAAAGTCAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGGCCGTCTGCAGCAGGTaGTCAGCCTGGTACACGGCG +
Preference number: 4 (lower is better)
Translates to: LQSQGLGLSGTSWTVECWAVCSR*SAWYTA
Trigger: CGCCGTGTACCAGGCTGAGCACCTGCTGCAGACGGC...CCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTGACTTTGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp ACTGACACCCTCTCGAAGAGCACGCAGGGGAACCTGGTCCTGGGATGGAGTCTTCAGGTCCCGGCCGTCTaGAGCAGGTGCTCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: TDTLSKSTQGNLVLGWSLQVPAV*SRCSAW
Trigger: CCAGGCTGAGCACCTGCTGCAGACGGCCGGGACCTG...AAGACTCCATCCCAGGACCAGGTTCCCCTGCGTGCTCTTCGAGAGGGTGTCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR GCA 90 bp CAGGAGGTTCTCCAGTGTGACACTGGGGTCGGGGCTGACGTGGAACCTGTCCTGCCGATGACGCACGGCTaGTTCGCTCCCCAGCATCTG +
Preference number: 4 (lower is better)
Translates to: QEVLQCDTGVGADVEPVLPMTHG*FAPQHL
Trigger: CAGATGCTGGGGAGCGAAGCAGCCGTGCGTCATCGG...CAGGACAGGTTCCACGTCAGCCCCGACCCCAGTGTCACACTGGAGAACCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560135.5
CDS-3UTR GCA 90 bp ATGTGGCCTCCTGAACACAGCGGGAGACCAGCGGCCACCTGGAGACACGTACACCCGTGTCCGTTGCCGTaGCTGCCAGGTCAGGAGGTT +
Preference number: 4 (lower is better)
Translates to: MWPPEHSGRPAATWRHVHPCPLP*LPGQEV
Trigger: AACCTCCTGACCTGGCAGGCACGGCAACGGACACGG...GTGTACGTGTCTCCAGGTGGCCGCTGGTCTCCCGCTGTGTTCAGGAGGCCACAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR GCA 90 bp GTCCACGTGATTCACCACCTCCAGCACCCGATGACGCACGGCTGCTTCGCTCCCACGTTGTCATGCAGGTaGCGCCGTGTCCGTTGCCGT +
Preference number: 4 (lower is better)
Translates to: VHVIHHLQHPMTHGCFAPTLSCR*RRVRCR
Trigger: ACGGCAACGGACACGGCGGCACCTGCATGACAACGT...GGGAGCGAAGCAGCCGTGCGTCATCGGGTGCTGGAGGTGGTGAATCACGTGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560135.5
CDS-3UTR GCA 90 bp TCGAAGAGCACGCAGGGGAACCTGGTCCTGGGATGGAGTCTTTCTGGGGATGCCTGGCAGCAGGTACCGTaGGCACACTGGGCCCCCTCA +
Preference number: 4 (lower is better)
Translates to: SKSTQGNLVLGWSLSGDAWQQVP*AHWAPS
Trigger: TGAGGGGGCCCAGTGTGCGCACGGTACCTGCTGCCA...GGCATCCCCAGAAAGACTCCATCCCAGGACCAGGTTCCCCTGCGTGCTCTTCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR GCA 90 bp CTGAGCCTGCAAAGTCAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCGTGGAATCCGGGCACTCAGGGTaGCGGCCGTCACAGAACTCC +
Preference number: 4 (lower is better)
Translates to: LSLQSQGLGLSGTSWTVESGHSG*RPSQNS
Trigger: GGAGTTCTGTGACGGCCGGCACCCTGAGTGCCCGGA...TTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTGACTTTGCAGGCTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp TTGGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGAGGTTGCACGCCCCAGGGGCTaGTGCCCACCCTTGCACTGC +
Preference number: 4 (lower is better)
Translates to: LAEGVDSRSLSGRCIPEVARPRG*CPPLHC
Trigger: GCAGTGCAAGGGTGGGCAGCAGCCCCTGGGGCGTGC...AACCTCAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp CTGCTCACTGACACCCTCTCGAAGAGCACGCAGGGGAACCTGGTCCTGGGATGGGGCACACATCCACGATaGAGATGGCACGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LLTDTLSKSTQGNLVLGWGTHPR*RWHAPG
Trigger: CCCTGGGGCGTGCCATCTGCATCGTGGATGTGTGCC...CCATCCCAGGACCAGGTTCCCCTGCGTGCTCTTCGAGAGGGTGTCAGTGAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR GCA 90 bp CTGCTCACTGACACCCTCTCGAAGAGCACGCAGGGGAACCTGGTCCTGGGATGGGGCTGGCAGCCTGCGTaGACCTCAGTCAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LLTDTLSKSTQGNLVLGWGWQPA*TSVSSF
Trigger: GAAGCTGCTGACTGAGGTGCACGCAGGCTGCCAGCC...CCATCCCAGGACCAGGTTCCCCTGCGTGCTCTTCGAGAGGGTGTCAGTGAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415217.7
CDS-3UTR GCA 90 bp CTGCAAAGTCAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGGATGCCCCACGTCTGTaGTGCCTGGAACCGGGTGCC +
Preference number: 4 (lower is better)
Translates to: LQSQGLGLSGTSWTVECWDAPRL*CLEPGA
Trigger: GGCACCCGGTTCCAGGCAGCACAGACGTGGGGCATC...CCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTGACTTTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR GCA 90 bp CAGCGGGAGACCAGCGGCCACCTGGAGACACGTACACACACACGCACCCGCAAGGAGTCTTTCTGGGGATaGCCCACGTCTGTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: QRETSGHLETRTHTRTRKESFWG*PTSVLP
Trigger: AGGCAGCACAGACGTGGGGCATCCCCAGAAAGACTC...CTTGCGGGTGCGTGTGTGTGTACGTGTCTCCAGGTGGCCGCTGGTCTCCCGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp GAATTGGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGAGGCGGACTCGGGGGCCTaGCAGACGCCACGGCAACAC +
Preference number: 4 (lower is better)
Translates to: ELAEGVDSRSLSGRCIPEADSGA*QTPRQH
Trigger: GTGTTGCCGTGGCGTCTGCCAGGCCCCCGAGTCCGC...CTCAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAATTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp CTGTCCCTCTTGAATCCCATGGGAAACAGGCCCCAAGATCAGGGGACCTGGAGTGCGGGTCTCTCGGGATaGCAGAGAGTCCCCGGGCCG +
Preference number: 4 (lower is better)
Translates to: LSLLNPMGNRPQDQGTWSAGLSG*QRVPGP
Trigger: CGGCCCGGGGACTCTCTGCCATCCCGAGAGACCCGC...ACTCCAGGTCCCCTGATCTTGGGGCCTGTTTCCCATGGGATTCAAGAGGGACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp CAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATGGCCATCTCATGGGCCATaGTACAGGCCACGCCCACGG +
Preference number: 4 (lower is better)
Translates to: QGLGLSGTSWTVECWNAWPSHGP*YRPRPR
Trigger: CCGTGGGCGTGGCCTGTACCATGGCCCATGAGATGG...CCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp CAGCAGCTGAGCCTGCAAAGTCAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCCCATCTCATGGGCCATaGTACAGGCCACGCCCACGG +
Preference number: 4 (lower is better)
Translates to: QQLSLQSQGLGLSGTSWTPSHGP*YRPRPR
Trigger: CCGTGGGCGTGGCCTGTACCATGGCCCATGAGATGG...GGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTGACTTTGCAGGCTCAGCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp AACCTGGTCCTGGGATGGAGTCTTTCTGGGGATGCCCCACGTCTGTGCTGCCTGGGCGTGCCGTTCTCCTaGAAGGCGTCTTCCGGGCAC +
Preference number: 4 (lower is better)
Translates to: NLVLGWSLSGDAPRLCCLGVPFS*KASSGH
Trigger: GTGCCCGGAAGACGCCTTCCAGGAGAACGGCACGCC...CAGGCAGCACAGACGTGGGGCATCCCCAGAAAGACTCCATCCCAGGACCAGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp CTGAGCCTGCAAAGTCAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCGTGGAAGGCGTGCCGTTCTCCTaGAAGGCGTCTTCCGGGCAC +
Preference number: 4 (lower is better)
Translates to: LSLQSQGLGLSGTSWTVEGVPFS*KASSGH
Trigger: GTGCCCGGAAGACGCCTTCCAGGAGAACGGCACGCC...TTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTGACTTTGCAGGCTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp GAACCTGGTCCTGGGATGGAGTCTTTCTGGGGATGCCCCACGTCTGTGCTGCCTAAGGCCTGGCACTGCTaGGCCAGTGTGGGACAGGCC +
Preference number: 4 (lower is better)
Translates to: EPGPGMESFWGCPTSVLPKAWHC*ASVGQA
Trigger: GGCCTGTCCCACACTGGCCCAGCAGTGCCAGGCCTT...AGGCAGCACAGACGTGGGGCATCCCCAGAAAGACTCCATCCCAGGACCAGGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp CAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATGGCAGCCCTGTACCGGCTaGCCTTGCAGCCTGGTAGGA +
Preference number: 4 (lower is better)
Translates to: QGLGLSGTSWTVECWNAWQPCTG*PCSLVG
Trigger: TCCTACCAGGCTGCAAGGCCAGCCGGTACAGGGCTG...CCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp CCTGGGATGGAGTCTTTCTGGGGATGCCCCACGTCTGTGCTGCCTGGAACCGGGCCAGCAAACCTTCTCTaGTCCACACCGGGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: PGMESFWGCPTSVLPGTGPANLL*STPGAL
Trigger: GAGGGCACCCGGTGTGGACCAGAGAAGGTTTGCTGG...CCCGGTTCCAGGCAGCACAGACGTGGGGCATCCCCAGAAAGACTCCATCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp CAGCGGGAGACCAGCGGCCACCTGGAGACACGTACACACACACGCACCCGCAAGTGGTTGCACACCCCATaGTTGTGGCACTGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: QRETSGHLETRTHTRTRKWLHTP*LWHWAE
Trigger: CTCTGCCCAGTGCCACAACCATGGGGTGTGCAACCA...CTTGCGGGTGCGTGTGTGTGTACGTGTCTCCAGGTGGCCGCTGGTCTCCCGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp GGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCAGCCCGCGTGGCAGTaGCACTCCTGCTTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: GLSGTSWTVECWNAWLLCQPAWQ*HSCLWL
Trigger: CAACCACAAGCAGGAGTGCCACTGCCACGCGGGCTG...GCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp GGCTGGGAGGGGCTGTATATGTGGCCTCCTGAACACAGCGGGAGACCAGCGGCCCTTGCTTCCTCTGGATaGGGGGCTTCAGGGCAACCT +
Preference number: 4 (lower is better)
Translates to: GWEGLYMWPPEHSGRPAALASSG*GASGQP
Trigger: AGGTTGCCCTGAAGCCCCCCATCCAGAGGAAGCAAG...GGCCGCTGGTCTCCCGCTGTGTTCAGGAGGCCACATATACAGCCCCTCCCAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp CAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATGGAGCTGGGGCTACACGTaGCCAAGGCGGGGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: QGLGLSGTSWTVECWNAWSWGYT*PRRGEG
Trigger: TCCTTCTCCCCGCCTTGGCCACGTGTAGCCCCAGCT...CCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp TGGCCTCCTGAACACAGCGGGAGACCAGCGGCCACCTGGAGACACGTACACACAAGCTGGGGCTACACGTaGCCAAGGCGGGGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: WPPEHSGRPAATWRHVHTSWGYT*PRRGEG
Trigger: TCCTTCTCCCCGCCTTGGCCACGTGTAGCCCCAGCT...TGTGTGTACGTGTCTCCAGGTGGCCGCTGGTCTCCCGCTGTGTTCAGGAGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp CCTGAACACAGCGGGAGACCAGCGGCCACCTGGAGACACGTACACACACACGCAGTGCCTGCAGACAGCTaGGGCTACACGTGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: PEHSGRPAATWRHVHTHAVPADS*GYTWPR
Trigger: CCTTGGCCACGTGTAGCCCCAGCTGTCTGCAGGCAC...TGCGTGTGTGTGTACGTGTCTCCAGGTGGCCGCTGGTCTCCCGCTGTGTTCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp CAGCGGGAGACCAGCGGCCACCTGGAGACACGTACACACACACGCACCCGCAAGAGACCAGCGGCCACCTaGAGACACGTACACACACAC +
Preference number: 4 (lower is better)
Translates to: QRETSGHLETRTHTRTRKRPAAT*RHVHTH
Trigger: GTGTGTGTGTACGTGTCTCCAGGTGGCCGCTGGTCT...CTTGCGGGTGCGTGTGTGTGTACGTGTCTCCAGGTGGCCGCTGGTCTCCCGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp AATCCCATGGGAAACAGGCCCCAAGATCAGGGGACCTGGAGTCGGGAGCTTGGGCACGTCTGTGCTGCCTaGAACCGGGTGCCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: NPMGNRPQDQGTWSRELGHVCAA*NRVPRA
Trigger: TGCCCTGGGCACCCGGTTCCAGGCAGCACAGACGTG...CCCAAGCTCCCGACTCCAGGTCCCCTGATCTTGGGGCCTGTTTCCCATGGGATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp CTAGGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATGGCTTCTCACGCGGCTGGCAGCCTaGTGGAACAGGGGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: LGLSGTSWTVECWNAWLLTRLAA*WNRGLE
Trigger: CTCCAACCCCCTGTTCCACCAGGCTGCCAGCCGCGT...GAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp AGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCAACACGCGGCTGGCAGCCTaGTGGAACAGGGGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: SGTSWTVECWNAWLLCRNTRLAA*WNRGLE
Trigger: CTCCAACCCCCTGTTCCACCAGGCTGCCAGCCGCGT...GTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000445355.8
ENST00000485491.6
CDS-3UTR TCA 90 bp CGGGATGGCAGAGAGTCCCCGGGCCGAGGCCTGAAGACGGCTGCCGTCCGGGGTGGACCACACGGAAGTTaGGTTTCTGATATAGCTTGT +
Preference number: 4 (lower is better)
Translates to: RDGRESPGRGLKTAAVRGGPHGS*VSDIAC
Trigger: ACAAGCTATATCAGAAACTCAACTTCCGTGTGGTCC...ACCCCGGACGGCAGCCGTCTTCAGGCCTCGGCCCGGGGACTCTCTGCCATCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560135.5
CDS-3UTR TCA 90 bp CAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATGGTGCCATCCTCTGTGGTaGGCGCGTGGCACACATCCA +
Preference number: 4 (lower is better)
Translates to: QGLGLSGTSWTVECWNAWCHPLW*ARGTHP
Trigger: TGGATGTGTGCCACGCGCTCACCACAGAGGATGGCA...CCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp AATCCCATGGGAAACAGGCCCCAAGATCAGGGGACCTGGAGTCGGGAGCTTGGGAGGGGCTCGATCAGGTaGAGGTCTGACCCCACCTGG +
Preference number: 4 (lower is better)
Translates to: NPMGNRPQDQGTWSRELGRGSIR*RSDPTW
Trigger: CCAGGTGGGGTCAGACCTGCACCTGATCGAGCCCCT...CCCAAGCTCCCGACTCCAGGTCCCCTGATCTTGGGGCCTGTTTCCCATGGGATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR GCA 90 bp ACACACAAAGCTGGGGCTGTCCCTCTTGAATCCCATGGGAAACAGGCCCCAAGAGCCTGGTACACGGCGTaGCGTCCGCCCTCGCCACCT +
Preference number: 4 (lower is better)
Translates to: THKAGAVPLESHGKQAPRAWYTA*RPPSPP
Trigger: AGGTGGCGAGGGCGGACGGCACGCCGTGTACCAGGC...TCTTGGGGCCTGTTTCCCATGGGATTCAAGAGGGACAGCCCCAGCTTTGTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR GCA 90 bp TGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGCGCAGGGCCTGGTACACGGCGTaGCGTCCGCCCTCGCCACCT +
Preference number: 4 (lower is better)
Translates to: WNAWLLCRNFSKFPHRRRAWYTA*RPPSPP
Trigger: AGGTGGCGAGGGCGGACGGCACGCCGTGTACCAGGC...CCTGCGCCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp ACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGCGCAGGTGCCAGGCCTGAAGACGGCTaGCGTCCGGGGTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: THGFSAATSPNFHTGAGARPEDG*RPGSQE
Trigger: CTCCTGGGACCCCGGACGGCAGCCGTCTTCAGGCCT...GGCACCTGCGCCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp AGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCAACCCGTGTCCGTTGCCGTaGCTGCCAGGTCAGGAGGTT +
Preference number: 4 (lower is better)
Translates to: SGTSWTVECWNAWLLCRNPCPLP*LPGQEV
Trigger: AACCTCCTGACCTGGCAGGCACGGCAACGGACACGG...GTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp CCGATGACGCACGGCTGCTTCGCTCCCCAGCATCTGGAACTCTGCATTGTCCACCCGTGTCCGTTGCCGTaGCTGCCAGGTCAGGAGGTT +
Preference number: 4 (lower is better)
Translates to: PMTHGCFAPQHLELCIVHPCPLP*LPGQEV
Trigger: AACCTCCTGACCTGGCAGGCACGGCAACGGACACGG...GTGGACAATGCAGAGTTCCAGATGCTGGGGAGCGAAGCAGCCGTGCGTCATCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560135.5
CDS-3UTR GCA 90 bp GGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCACGTTGTCATGCAGGTaGCGCCGTGTCCGTTGCCGT +
Preference number: 4 (lower is better)
Translates to: GLSGTSWTVECWNAWLLCTLSCR*RRVRCR
Trigger: ACGGCAACGGACACGGCGGCACCTGCATGACAACGT...GCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp CTGAGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCCAGCCGGCTTCACCTTaGACTCCTGGCAGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: LSGTSWTVECWNAWLLCRQPASP*TPGSRY
Trigger: GTACCTGCTGCCAGGAGTGCAAGGTGAAGCCGGCTG...GCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp AGGAATTGGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGCCCCGGAGCAGGGCGTaGCGTTCTCCTGGAAGGCGT +
Preference number: 4 (lower is better)
Translates to: RNWLRAWTAGASQVDAFLPRSRA*RSPGRR
Trigger: ACGCCTTCCAGGAGAACGGCACGCCCTGCTCCGGGG...CAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAATTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp TCGAAGAGCACGCAGGGGAACCTGGTCCTGGGATGGAGTCTTTCTGGGGATGCCCAGAAGGCCTGGCACTaGTGGGCCAGTGTGGGACAG +
Preference number: 4 (lower is better)
Translates to: SKSTQGNLVLGWSLSGDAQKAWH*WASVGQ
Trigger: CTGTCCCACACTGGCCCAGCAGTGCCAGGCCTTCTG...GGCATCCCCAGAAAGACTCCATCCCAGGACCAGGTTCCCCTGCGTGCTCTTCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR GCA 90 bp CAGCTGGGGCTACACGTGGCCAAGGCGGGGAGAAGGAATTGGCTGAGGGCGTGGTGCCCACCCTTGCACTaGAGAACGCCACACATGTCA +
Preference number: 4 (lower is better)
Translates to: QLGLHVAKAGRRNWLRAWCPPLH*RTPHMS
Trigger: TGACATGTGTGGCGTTCTGCAGTGCAAGGGTGGGCA...CCACGCCCTCAGCCAATTCCTTCTCCCCGCCTTGGCCACGTGTAGCCCCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR GCA 90 bp GGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCGCTGCTGCCCACCCTTaGACTGCAGAACGCCACACA +
Preference number: 4 (lower is better)
Translates to: GLSGTSWTVECWNAWLLCAAAHP*TAERHT
Trigger: TGTGTGGCGTTCTGCAGTGCAAGGGTGGGCAGCAGC...GCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp CACACACGCACCCGCAAGCACACAGCTCATCCCAGCCTGGTGCCTGCAGACAGCGATGACCTGCTTTGGTaGCTGCCGGGTGTAGACAGG +
Preference number: 4 (lower is better)
Translates to: HTRTRKHTAHPSLVPADSDDLLW*LPGVDR
Trigger: CCTGTCTACACCCGGCAGGCACCAAAGCAGGTCATC...GCTGTCTGCAGGCACCAGGCTGGGATGAGCTGTGTGCTTGCGGGTGCGTGTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR GCA 90 bp CAGCAGCTGAGCCTGCAAAGTCAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCTGGGGGCACTGGGGGTaGGAACGTTGGCTTGATGAC +
Preference number: 4 (lower is better)
Translates to: QQLSLQSQGLGLSGTSWTWGHWG*ERWLDD
Trigger: GTCATCAAGCCAACGTTCGCACCCCCAGTGCCCCCA...GGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTGACTTTGCAGGCTCAGCTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR GCA 90 bp TGGCCTCCTGAACACAGCGGGAGACCAGCGGCCACCTGGAGACACGTACACACATGGGGGCACTGGGGGTaGGAACGTTGGCTTGATGAC +
Preference number: 4 (lower is better)
Translates to: WPPEHSGRPAATWRHVHTWGHWG*ERWLDD
Trigger: GTCATCAAGCCAACGTTCGCACCCCCAGTGCCCCCA...TGTGTGTACGTGTCTCCAGGTGGCCGCTGGTCTCCCGCTGTGTTCAGGAGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR GCA 90 bp AATTGGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGAGGCCACACAGGCGCAGGTaGCCCCCTAGGGTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: NWLRAWTAGASQVDAFLRPHRRR*PPRVLW
Trigger: CCACAGCACCCTAGGGGGGCACCTGCGCCTGTGTGG...CCTCAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp ACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGCGCAGGTGCCCCACACAGGCGCAGGTaGCCCCCTAGGGTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: THGFSAATSPNFHTGAGAPHRRR*PPRVLW
Trigger: CCACAGCACCCTAGGGGGGCACCTGCGCCTGTGTGG...GGCACCTGCGCCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp TTGGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGAGGTTGCCCCACGTCTGTGCTaGCTGGAACCGGGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: LAEGVDSRSLSGRCIPEVAPRLC*LEPGAQ
Trigger: CTGGGCACCCGGTTCCAGGCAGCACAGACGTGGGGC...AACCTCAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR GCA 90 bp GCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGCGCAGGTGCCCCGATGCCCCACGTCTGTaGTGCCTGGAACCGGGTGCC +
Preference number: 4 (lower is better)
Translates to: AWLLCRNFSKFPHRRRCPDAPRL*CLEPGA
Trigger: GGCACCCGGTTCCAGGCAGCACAGACGTGGGGCATC...GGGGCACCTGCGCCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR GCA 90 bp GAACCTGGTCCTGGGATGGAGTCTTTCTGGGGATGCCCCACGTCTGTGCTGCCTCGTTCCTGCTCAGGATaGGGCTCCGGGCTTTGCGGT +
Preference number: 4 (lower is better)
Translates to: EPGPGMESFWGCPTSVLPRSCSG*GSGLCG
Trigger: ACCGCAAAGCCCGGAGCCGCATCCTGAGCAGGAACG...AGGCAGCACAGACGTGGGGCATCCCCAGAAAGACTCCATCCCAGGACCAGGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445355.8
CDS-3UTR CCA 90 bp CTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGCGCAGGGGTGCAGGCCCAAGTaGGAGGGCAGAGCTCGGCGG +
Preference number: 4 (lower is better)
Translates to: LERMASLPQLLQISTQAQGCRPK*EGRARR
Trigger: CCGCCGAGCTCTGCCCTCCCACTTGGGCCTGCACCC...CTGCGCCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp CTAGGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATGGCTTCTCACAGCCCCTGAGCTGTaGGAGCACATGGCGGACACC +
Preference number: 4 (lower is better)
Translates to: LGLSGTSWTVECWNAWLLTAPEL*EHMADT
Trigger: GGTGTCCGCCATGTGCTCCCACAGCTCAGGGGCTGT...GAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp CTGAGCCTGCAAAGTCAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCGTGGAACCATCTCATGGGCCATaGTACAGGCCACGCCCACGG +
Preference number: 4 (lower is better)
Translates to: LSLQSQGLGLSGTSWTVEPSHGP*YRPRPR
Trigger: CCGTGGGCGTGGCCTGTACCATGGCCCATGAGATGG...TTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTGACTTTGCAGGCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp CTAGCTGGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAGGCCCCCAGAAGGCCTaGCACTGCTGGGCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: LAGPWNAGTHGFSAATSPGPQKA*HCWASV
Trigger: CACACTGGCCCAGCAGTGCCAGGCCTTCTGGGGGCC...TGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp CTAGGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATGGCTTCTCCAGCCCTGTACCGGCTaGCCTTGCAGCCTGGTAGGA +
Preference number: 4 (lower is better)
Translates to: LGLSGTSWTVECWNAWLLQPCTG*PCSLVG
Trigger: TCCTACCAGGCTGCAAGGCCAGCCGGTACAGGGCTG...GAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp CTGCAAAGTCAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGCAGCCCTGTACCGGCTaGCCTTGCAGCCTGGTAGGA +
Preference number: 4 (lower is better)
Translates to: LQSQGLGLSGTSWTVECWQPCTG*PCSLVG
Trigger: TCCTACCAGGCTGCAAGGCCAGCCGGTACAGGGCTG...CCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTGACTTTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp TGGGATGGAGTCTTTCTGGGGATGCCCCACGTCTGTGCTGCCTGGAACCGGGTGGGTGCCCTCGGGCACTaGTTCATACGCAGTGCCATC +
Preference number: 4 (lower is better)
Translates to: WDGVFLGMPHVCAAWNRVGALGH*FIRSAI
Trigger: GATGGCACTGCGTATGAACCAGTGCCCGAGGGCACC...CACCCGGTTCCAGGCAGCACAGACGTGGGGCATCCCCAGAAAGACTCCATCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp GGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCGGTGCCCTCGGGCACTaGTTCATACGCAGTGCCATC +
Preference number: 4 (lower is better)
Translates to: GLSGTSWTVECWNAWLLCGALGH*FIRSAI
Trigger: GATGGCACTGCGTATGAACCAGTGCCCGAGGGCACC...GCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp TGGCCTCCTGAACACAGCGGGAGACCAGCGGCCACCTGGAGACACGTACACACACCAGCAAACCTTCTCTaGTCCACACCGGGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: WPPEHSGRPAATWRHVHTPANLL*STPGAL
Trigger: GAGGGCACCCGGTGTGGACCAGAGAAGGTTTGCTGG...TGTGTGTACGTGTCTCCAGGTGGCCGCTGGTCTCCCGCTGTGTTCAGGAGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp CTGAGCCTGCAAAGTCAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCGTGGAACAGCCCGCGTGGCAGTaGCACTCCTGCTTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: LSLQSQGLGLSGTSWTVEQPAWQ*HSCLWL
Trigger: CAACCACAAGCAGGAGTGCCACTGCCACGCGGGCTG...TTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTGACTTTGCAGGCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp CTGCAAAGTCAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGAACAGCACCCTCAGCTaGACCAGGGTTGGCCGCACC +
Preference number: 4 (lower is better)
Translates to: LQSQGLGLSGTSWTVECWNSTLS*TRVGRT
Trigger: GGTGCGGCCAACCCTGGTCCAGCTGAGGGTGCTGTT...CCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTGACTTTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp CAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATGGCTGGAGTCGGGAGCTTaGGGTGCAGTCTGCTCACTG +
Preference number: 4 (lower is better)
Translates to: QGLGLSGTSWTVECWNAWLESGA*GAVCSL
Trigger: CAGTGAGCAGACTGCACCCCAAGCTCCCGACTCCAG...CCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp TGCAGACAGCTGGGGCTACACGTGGCCAAGGCGGGGAGAAGGAATTGGCTGAGGCAAGATCAGGGGACCTaGAGTCGGGAGCTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: CRQLGLHVAKAGRRNWLRQDQGT*SRELGV
Trigger: CACCCCAAGCTCCCGACTCCAGGTCCCCTGATCTTG...CCTCAGCCAATTCCTTCTCCCCGCCTTGGCCACGTGTAGCCCCAGCTGTCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
3UTR CAA 72 bp GAGCTGTACGTTGTCATGCAGGTGCCGCCGTGTCCGTaGCCGTGCCTGCCAGGTCAGGAGGTTCTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: ELYVVMQVPPCP*PCLPGQEVLQC
Trigger: ACACTGGAGAACCTCCTGACCTGGCAGGCACGGCAACGGACACGGCGGCACCTGCATGACAACGTACAGCTC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560135.5
CDS-3UTR TCA 90 bp ACACACAAAGCTGGGGCTGTCCCTCTTGAATCCCATGGGAAACAGGCCCCAAGAGCTGAGGCTGGCGGCTaGGTCCGGGTACCCCTCTAC +
Preference number: 4 (lower is better)
Translates to: THKAGAVPLESHGKQAPRAEAGG*VRVPLY
Trigger: GTAGAGGGGTACCCGGACTCAGCCGCCAGCCTCAGC...TCTTGGGGCCTGTTTCCCATGGGATTCAAGAGGGACAGCCCCAGCTTTGTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR TCA 90 bp GAACCTGGTCCTGGGATGGAGTCTTTCTGGGGATGCCCCACGTCTGTGCTGCCTTGCCATCCTCTGTGGTaGGCGCGTGGCACACATCCA +
Preference number: 4 (lower is better)
Translates to: EPGPGMESFWGCPTSVLPCHPLW*ARGTHP
Trigger: TGGATGTGTGCCACGCGCTCACCACAGAGGATGGCA...AGGCAGCACAGACGTGGGGCATCCCCAGAAAGACTCCATCCCAGGACCAGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR TCA 90 bp TGCAGACAGCTGGGGCTACACGTGGCCAAGGCGGGGAGAAGGAATTGGCTGAGGGTATATGTGGCCTCCTaGACACAGCGGGAGACCAGC +
Preference number: 4 (lower is better)
Translates to: CRQLGLHVAKAGRRNWLRVYVAS*TQRETS
Trigger: GCTGGTCTCCCGCTGTGTTCAGGAGGCCACATATAC...CCTCAGCCAATTCCTTCTCCCCGCCTTGGCCACGTGTAGCCCCAGCTGTCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR GCA 90 bp AAGGAATTGGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTTCCTGCCCGCGAGGCTaGTCCGTCACCTCGGAGCCA +
Preference number: 4 (lower is better)
Translates to: KELAEGVDSRSLSGRCIPSCPRG*SVTSEP
Trigger: TGGCTCCGAGGTGACGGAGCAGCCTCGCGGGCAGGA...AGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAATTCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp TTCGCTCCCCAGCATCTGGAACTCTGCATTGTCCACGACCACATACAGCTCCACTCCTGCCCGCGAGGCTaGTCCGTCACCTCGGAGCCA +
Preference number: 4 (lower is better)
Translates to: FAPQHLELCIVHDHIQLHSCPRG*SVTSEP
Trigger: TGGCTCCGAGGTGACGGAGCAGCCTCGCGGGCAGGA...GTGGAGCTGTATGTGGTCGTGGACAATGCAGAGTTCCAGATGCTGGGGAGCGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560135.5
CDS-3UTR GCA 90 bp AAGGAATTGGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTCAGGTCCCGGCCGTCTaGAGCAGGTGCTCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: KELAEGVDSRSLSGRCIPQVPAV*SRCSAW
Trigger: CCAGGCTGAGCACCTGCTGCAGACGGCCGGGACCTG...AGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAATTCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp CTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGCGCAGCAGGTCCCGGCCGTCTaGAGCAGGTGCTCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: LERMASLPQLLQISTQAQQVPAV*SRCSAW
Trigger: CCAGGCTGAGCACCTGCTGCAGACGGCCGGGACCTG...CTGCGCCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp ACTGACACCCTCTCGAAGAGCACGCAGGGGAACCTGGTCCTGGGATGGAGTCTTCCGATGACGCACGGCTaGTTCGCTCCCCAGCATCTG +
Preference number: 4 (lower is better)
Translates to: TDTLSKSTQGNLVLGWSLPMTHG*FAPQHL
Trigger: CAGATGCTGGGGAGCGAAGCAGCCGTGCGTCATCGG...AAGACTCCATCCCAGGACCAGGTTCCCCTGCGTGCTCTTCGAGAGGGTGTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR GCA 90 bp GCTCCCCAGCATCTGGAACTCTGCATTGTCCACGACCACATACAGCTCCACGTATGCCGCCGTGTCCGTTaGCGTGCCTGCCAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: APQHLELCIVHDHIQLHVCRRVR*RACQVR
Trigger: CCTGACCTGGCAGGCACGGCAACGGACACGGCGGCA...TACGTGGAGCTGTATGTGGTCGTGGACAATGCAGAGTTCCAGATGCTGGGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560135.5
CDS-3UTR GCA 90 bp GGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCAGCTGTACGTTGTCATaGAGGTGCCGCCGTGTCCGT +
Preference number: 4 (lower is better)
Translates to: GLSGTSWTVECWNAWLLCSCTLS*RCRRVR
Trigger: ACGGACACGGCGGCACCTGCATGACAACGTACAGCT...GCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp CTAGGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATGGCTTCTCCGCCCACGGGGTTCTTaGTGTGGTCCTGGTTCACAG +
Preference number: 4 (lower is better)
Translates to: LGLSGTSWTVECWNAWLLRPRGS*CGPGSQ
Trigger: CTGTGAACCAGGACCACAGCAAGAACCCCGTGGGCG...GAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp AGGAATTGGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGTCCGGGCACTCAGGGTaGCGGCCGTCACAGAACTCC +
Preference number: 4 (lower is better)
Translates to: RNWLRAWTAGASQVDAFLSGHSG*RPSQNS
Trigger: GGAGTTCTGTGACGGCCGGCACCCTGAGTGCCCGGA...CAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAATTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp GGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCGCACGCCCCAGGGGCTaGTGCCCACCCTTGCACTGC +
Preference number: 4 (lower is better)
Translates to: GPWNAGTHGFSAATSPNFARPRG*CPPLHC
Trigger: GCAGTGCAAGGGTGGGCAGCAGCCCCTGGGGCGTGC...GAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp CGAAGAGCACGCAGGGGAACCTGGTCCTGGGATGGAGTCTTTCTGGGGATGCCCTGGCAGTGGCACTCCTaGTTGTGGTTGCACACCCCA +
Preference number: 4 (lower is better)
Translates to: RRARRGTWSWDGVFLGMPWQWHS*LWLHTP
Trigger: TGGGGTGTGCAACCACAAGCAGGAGTGCCACTGCCA...GGGCATCCCCAGAAAGACTCCATCCCAGGACCAGGTTCCCCTGCGTGCTCTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR GCA 90 bp CTGAGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCGTTGGCTTGATGACCTaGTTTGGTGCCTGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: LSGTSWTVECWNAWLLCRVGLMT*FGACRV
Trigger: CACCCGGCAGGCACCAAAGCAGGTCATCAAGCCAAC...GCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR GCA 90 bp AATTGGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGAGGGAGGCTCCCGGACGCTaGGTGCACCTCAGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: NWLRAWTAGASQVDAFLREAPGR*VHLSQQ
Trigger: CTGCTGACTGAGGTGCACGCAGCGTCCGGGAGCCTC...CCTCAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp AGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCAACAGCTGTGGGAGCACATaGCGGACACCCTGGCAAACC +
Preference number: 4 (lower is better)
Translates to: SGTSWTVECWNAWLLCRNSCGST*RTPWQT
Trigger: GGTTTGCCAGGGTGTCCGCCATGTGCTCCCACAGCT...GTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp CTGCTCACTGACACCCTCTCGAAGAGCACGCAGGGGAACCTGGTCCTGGGATGGACGGGGTTCTTGCTGTaGTCCTGGTTCACAGCCCCT +
Preference number: 4 (lower is better)
Translates to: LLTDTLSKSTQGNLVLGWTGFLL*SWFTAP
Trigger: AGGGGCTGTGAACCAGGACCACAGCAAGAACCCCGT...CCATCCCAGGACCAGGTTCCCCTGCGTGCTCTTCGAGAGGGTGTCAGTGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp GGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCACGGGGTTCTTGCTGTaGTCCTGGTTCACAGCCCCT +
Preference number: 4 (lower is better)
Translates to: GLSGTSWTVECWNAWLLCTGFLL*SWFTAP
Trigger: AGGGGCTGTGAACCAGGACCACAGCAAGAACCCCGT...GCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp AAGGAATTGGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGCCTCGAAGCGTTCCTaGCAGCGGCAGCCCTGGACG +
Preference number: 4 (lower is better)
Translates to: KELAEGVDSRSLSGRCIPASKRS*QRQPWT
Trigger: CGTCCAGGGCTGCCGCTGCCAGGAACGCTTCGAGGC...AGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAATTCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp GAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGAGGTTAGAACAGCCTCGAAGCGTTCCTaGCAGCGGCAGCCCTGGACG +
Preference number: 4 (lower is better)
Translates to: EGVDSRSLSGRCIPEVRTASKRS*QRQPWT
Trigger: CGTCCAGGGCTGCCGCTGCCAGGAACGCTTCGAGGC...TGTTCTAACCTCAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp GGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCGGGCCGCCCACCAGGTaGCTGAGGTCAGGGGCGTTG +
Preference number: 4 (lower is better)
Translates to: GPWNAGTHGFSAATSPNFGPPTR*LRSGAL
Trigger: CAACGCCCCTGACCTCAGCCACCTGGTGGGCGGCCC...GAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp CTGAGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCTTCACCTTGCACTCCTaGCAGCAGGTACCGTGCGCA +
Preference number: 4 (lower is better)
Translates to: LSGTSWTVECWNAWLLCRFTLHS*QQVPCA
Trigger: TGCGCACGGTACCTGCTGCCAGGAGTGCAAGGTGAA...GCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp CTGTCCCTCTTGAATCCCATGGGAAACAGGCCCCAAGATCAGGGGACCTGGAGTGGCGTGCCGTTCTCCTaGAAGGCGTCTTCCGGGCAC +
Preference number: 4 (lower is better)
Translates to: LSLLNPMGNRPQDQGTWSGVPFS*KASSGH
Trigger: GTGCCCGGAAGACGCCTTCCAGGAGAACGGCACGCC...ACTCCAGGTCCCCTGATCTTGGGGCCTGTTTCCCATGGGATTCAAGAGGGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp TGGGATGGAGTCTTTCTGGGGATGCCCCACGTCTGTGCTGCCTGGAACCGGGTGTCTGTGGTGAGCGCGTaGCACACATCCACGATGCAG +
Preference number: 4 (lower is better)
Translates to: WDGVFLGMPHVCAAWNRVSVVSA*HTSTMQ
Trigger: CTGCATCGTGGATGTGTGCCACGCGCTCACCACAGA...CACCCGGTTCCAGGCAGCACAGACGTGGGGCATCCCCAGAAAGACTCCATCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp CTGCTCACTGACACCCTCTCGAAGAGCACGCAGGGGAACCTGGTCCTGGGATGGCACACCCCATGGTTGTaGCACTGGGCAGAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: LLTDTLSKSTQGNLVLGWHTPWL*HWAEQL
Trigger: CAACTGCTCTGCCCAGTGCCACAACCATGGGGTGTG...CCATCCCAGGACCAGGTTCCCCTGCGTGCTCTTCGAGAGGGTGTCAGTGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp GGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCTGGTTGCACACCCCATaGTTGTGGCACTGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: GLSGTSWTVECWNAWLLCWLHTP*LWHWAE
Trigger: CTCTGCCCAGTGCCACAACCATGGGGTGTGCAACCA...GCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp AGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGAGGTTAGAACAGCAGCTGGACCAGGGTTaGCCGCACCAGCCCCGGGTT +
Preference number: 4 (lower is better)
Translates to: RAWTAGASQVDAFLRLEQQLDQG*PHQPRV
Trigger: AACCCGGGGCTGGTGCGGCCAACCCTGGTCCAGCTG...CTGTTCTAACCTCAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp TGCAGACAGCTGGGGCTACACGTGGCCAAGGCGGGGAGAAGGAATTGGCTGAGGCTTCAGGGCAACCTTTaGGCCAACAGCACCCTCAGC +
Preference number: 4 (lower is better)
Translates to: CRQLGLHVAKAGRRNWLRLQGNL*ANSTLS
Trigger: GCTGAGGGTGCTGTTGGCCCAAAGGTTGCCCTGAAG...CCTCAGCCAATTCCTTCTCCCCGCCTTGGCCACGTGTAGCCCCAGCTGTCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp TGGCCTCCTGAACACAGCGGGAGACCAGCGGCCACCTGGAGACACGTACACACAGCACTAGCTGGACCGTaGAATGCTGGAACGCATGGC +
Preference number: 4 (lower is better)
Translates to: WPPEHSGRPAATWRHVHTALAGP*NAGTHG
Trigger: GCCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGC...TGTGTGTACGTGTCTCCAGGTGGCCGCTGGTCTCCCGCTGTGTTCAGGAGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp GGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCAATTGGCTGAGGGCGTaGACAGCAGGAGCCTCTCAG +
Preference number: 4 (lower is better)
Translates to: GLSGTSWTVECWNAWLLCNWLRA*TAGASQ
Trigger: CTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAATT...GCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp AGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCAACGCGGGGAGAAGGAATTaGCTGAGGGCGTGGACAGCA +
Preference number: 4 (lower is better)
Translates to: SGTSWTVECWNAWLLCRNAGRRN*LRAWTA
Trigger: TGCTGTCCACGCCCTCAGCCAATTCCTTCTCCCCGC...GTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp CTAGGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATGGCTTCTCGCGGGGAGAAGGAATTaGCTGAGGGCGTGGACAGCA +
Preference number: 4 (lower is better)
Translates to: LGLSGTSWTVECWNAWLLAGRRN*LRAWTA
Trigger: TGCTGTCCACGCCCTCAGCCAATTCCTTCTCCCCGC...GAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp GCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGCGCAGGTGCCCCGTGCCTGCAGACAGCTaGGGCTACACGTGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: AWLLCRNFSKFPHRRRCPVPADS*GYTWPR
Trigger: CCTTGGCCACGTGTAGCCCCAGCTGTCTGCAGGCAC...GGGGCACCTGCGCCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp CTGCTCACTGACACCCTCTCGAAGAGCACGCAGGGGAACCTGGTCCTGGGATGGAGACCAGCGGCCACCTaGAGACACGTACACACACAC +
Preference number: 4 (lower is better)
Translates to: LLTDTLSKSTQGNLVLGWRPAAT*RHVHTH
Trigger: GTGTGTGTGTACGTGTCTCCAGGTGGCCGCTGGTCT...CCATCCCAGGACCAGGTTCCCCTGCGTGCTCTTCGAGAGGGTGTCAGTGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp GTCCTGGGATGGAGTCTTTCTGGGGATGCCCCACGTCTGTGCTGCCTGGAACCGGAGGGGCTGTATATGTaGCCTCCTGAACACAGCGGG +
Preference number: 4 (lower is better)
Translates to: VLGWSLSGDAPRLCCLEPEGLYM*PPEHSG
Trigger: CCCGCTGTGTTCAGGAGGCCACATATACAGCCCCTC...CGGTTCCAGGCAGCACAGACGTGGGGCATCCCCAGAAAGACTCCATCCCAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp CTGAGCCTGCAAAGTCAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCGTGGAACAAGATCAGGGGACCTaGAGTCGGGAGCTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: LSLQSQGLGLSGTSWTVEQDQGT*SRELGV
Trigger: CACCCCAAGCTCCCGACTCCAGGTCCCCTGATCTTG...TTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTGACTTTGCAGGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR TCA 90 bp TTCCTAAGCTTAAACACACACAAAGCTGGGGCTGTCCCTCTTGAATCCCATGGGGGCCGGCACAGGTGCTaGGGCTGGCGGCTGAGTCCG +
Preference number: 4 (lower is better)
Translates to: FLSLNTHKAGAVPLESHGGRHRC*GWRLSP
Trigger: CGGACTCAGCCGCCAGCCTCAGCACCTGTGCCGGCC...CCCATGGGATTCAAGAGGGACAGCCCCAGCTTTGTGTGTGTTTAAGCTTAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR TCA 90 bp AAGGAATTGGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTACCTCCAGCACCCGATaGCGCACGGCTGCTTCGCTC +
Preference number: 4 (lower is better)
Translates to: KELAEGVDSRSLSGRCIPTSSTR*RTAASL
Trigger: GAGCGAAGCAGCCGTGCGTCATCGGGTGCTGGAGGT...AGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAATTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR TCA 90 bp AGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGAGGTTAGAACAGACCTCCAGCACCCGATaGCGCACGGCTGCTTCGCTC +
Preference number: 4 (lower is better)
Translates to: RAWTAGASQVDAFLRLEQTSSTR*RTAASL
Trigger: GAGCGAAGCAGCCGTGCGTCATCGGGTGCTGGAGGT...CTGTTCTAACCTCAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR TCA 90 bp GCTCCCCAGCATCTGGAACTCTGCATTGTCCACGACCACATACAGCTCCACGTAACCTCCAGCACCCGATaGCGCACGGCTGCTTCGCTC +
Preference number: 4 (lower is better)
Translates to: APQHLELCIVHDHIQLHVTSSTR*RTAASL
Trigger: GAGCGAAGCAGCCGTGCGTCATCGGGTGCTGGAGGT...TACGTGGAGCTGTATGTGGTCGTGGACAATGCAGAGTTCCAGATGCTGGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560135.5
CDS-3UTR TCA 90 bp CAGCTGGGGCTACACGTGGCCAAGGCGGGGAGAAGGAATTGGCTGAGGGCGTGGACGTGGAACCTGTCCTaGCTATTCCAAATCTCCAGG +
Preference number: 4 (lower is better)
Translates to: QLGLHVAKAGRRNWLRAWTWNLS*LFQISR
Trigger: CCTGGAGATTTGGAATAGTCAGGACAGGTTCCACGT...CCACGCCCTCAGCCAATTCCTTCTCCCCGCCTTGGCCACGTGTAGCCCCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR TCA 90 bp CCGTGCCTGCCAGGTCAGGAGGTTCTCCAGTGTGACACTGGGGTCGGGGCTGACACGTGGAACCTGTCCTaGCTATTCCAAATCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PCLPGQEVLQCDTGVGADTWNLS*LFQISR
Trigger: CCTGGAGATTTGGAATAGTCAGGACAGGTTCCACGT...GTCAGCCCCGACCCCAGTGTCACACTGGAGAACCTCCTGACCTGGCAGGCACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560135.5
CDS-3UTR TCA 90 bp TTCGCTCCCCAGCATCTGGAACTCTGCATTGTCCACGACCACATACAGCTCCACCACTGGGGTCGGGGCTaGCGTGGAACCTGTCCTGAC +
Preference number: 4 (lower is better)
Translates to: FAPQHLELCIVHDHIQLHHWGRG*RGTCPD
Trigger: GTCAGGACAGGTTCCACGTCAGCCCCGACCCCAGTG...GTGGAGCTGTATGTGGTCGTGGACAATGCAGAGTTCCAGATGCTGGGGAGCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560135.5
CDS-3UTR TCA 90 bp CTAGCTGGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCACTGGTTCACAGCCCCTaGGCTGTGGGAGCACATGGC +
Preference number: 4 (lower is better)
Translates to: LAGPWNAGTHGFSAATSPLVHSP*AVGAHG
Trigger: GCCATGTGCTCCCACAGCTCAGGGGCTGTGAACCAG...TGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR TCA 90 bp CTGAGCCTGCAAAGTCAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCGTGGAACCTGGCTGCAGTCACTaGACATCCTGGGGAAACTGG +
Preference number: 4 (lower is better)
Translates to: LSLQSQGLGLSGTSWTVEPGCSH*TSWGNW
Trigger: CCAGTTTCCCCAGGATGTTCAGTGACTGCAGCCAGG...TTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTGACTTTGCAGGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR TCA 90 bp TCGAAGAGCACGCAGGGGAACCTGGTCCTGGGATGGAGTCTTTCTGGGGATGCCTGGGGCTGTCCCTCTTaGATCCCATGGGAAACAGGC +
Preference number: 4 (lower is better)
Translates to: SKSTQGNLVLGWSLSGDAWGCPS*IPWETG
Trigger: GCCTGTTTCCCATGGGATTCAAGAGGGACAGCCCCA...GGCATCCCCAGAAAGACTCCATCCCAGGACCAGGTTCCCCTGCGTGCTCTTCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR GCA 90 bp GACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCAGGCCTGAAGACGGCTaGCGTCCGGGGTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: DRGMLERMASLPQLLQISRPEDG*RPGSQE
Trigger: CTCCTGGGACCCCGGACGGCAGCCGTCTTCAGGCCT...GGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp AATTGGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGAGGCCGATGACGCACGGCTaGTTCGCTCCCCAGCATCTG +
Preference number: 4 (lower is better)
Translates to: NWLRAWTAGASQVDAFLRPMTHG*FAPQHL
Trigger: CAGATGCTGGGGAGCGAAGCAGCCGTGCGTCATCGG...CCTCAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp AGGAATTGGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGCCGATGACGCACGGCTaGTTCGCTCCCCAGCATCTG +
Preference number: 4 (lower is better)
Translates to: RNWLRAWTAGASQVDAFLPMTHG*FAPQHL
Trigger: CAGATGCTGGGGAGCGAAGCAGCCGTGCGTCATCGG...CAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAATTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp AGGAATTGGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGCCGTGTCCGTTGCCGTaGCTGCCAGGTCAGGAGGTT +
Preference number: 4 (lower is better)
Translates to: RNWLRAWTAGASQVDAFLPCPLP*LPGQEV
Trigger: AACCTCCTGACCTGGCAGGCACGGCAACGGACACGG...CAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAATTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp TCACTGACACCCTCTCGAAGAGCACGCAGGGGAACCTGGTCCTGGGATGGAGTCAGCTGTACGTTGTCATaGAGGTGCCGCCGTGTCCGT +
Preference number: 4 (lower is better)
Translates to: SLTPSRRARRGTWSWDGVSCTLS*RCRRVR
Trigger: ACGGACACGGCGGCACCTGCATGACAACGTACAGCT...GACTCCATCCCAGGACCAGGTTCCCCTGCGTGCTCTTCGAGAGGGTGTCAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR GCA 90 bp AATTGGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGAGGGCGAGGCACACCGACTaGGGCCGCTCCAAAAAGCTC +
Preference number: 4 (lower is better)
Translates to: NWLRAWTAGASQVDAFLRARHTD*GRSKKL
Trigger: GAGCTTTTTGGAGCGGCCGCAGTCGGTGTGCCTCGC...CCTCAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp CTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGCGCAGGGGCCGCAGTCGCACTaGTCCCCACGCTCCACAAAC +
Preference number: 4 (lower is better)
Translates to: LERMASLPQLLQISTQAQGPQSH*SPRSTN
Trigger: GTTTGTGGAGCGTGGGGAGCAGTGCGACTGCGGCCC...CTGCGCCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp AAGGAATTGGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTTGGCAGCAGGTACCGTaGGCACACTGGGCCCCCTCA +
Preference number: 4 (lower is better)
Translates to: KELAEGVDSRSLSGRCIPWQQVP*AHWAPS
Trigger: TGAGGGGGCCCAGTGTGCGCACGGTACCTGCTGCCA...AGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAATTCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp GCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGCGCAGGTGCCCCCAGCCGGCTTCACCTTaGACTCCTGGCAGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: AWLLCRNFSKFPHRRRCPQPASP*TPGSRY
Trigger: GTACCTGCTGCCAGGAGTGCAAGGTGAAGCCGGCTG...GGGGCACCTGCGCCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp AAGGAATTGGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTTCCGGGCACTCAGGGTaGCGGCCGTCACAGAACTCC +
Preference number: 4 (lower is better)
Translates to: KELAEGVDSRSLSGRCIPSGHSG*RPSQNS
Trigger: GGAGTTCTGTGACGGCCGGCACCCTGAGTGCCCGGA...AGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAATTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp TTGGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGAGGTTCAGAAGGCCTGGCACTaGTGGGCCAGTGTGGGACAG +
Preference number: 4 (lower is better)
Translates to: LAEGVDSRSLSGRCIPEVQKAWH*WASVGQ
Trigger: CTGTCCCACACTGGCCCAGCAGTGCCAGGCCTTCTG...AACCTCAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp ACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGCGCAGGTGCCCAGAAGGCCTGGCACTaGTGGGCCAGTGTGGGACAG +
Preference number: 4 (lower is better)
Translates to: THGFSAATSPNFHTGAGAQKAWH*WASVGQ
Trigger: CTGTCCCACACTGGCCCAGCAGTGCCAGGCCTTCTG...GGCACCTGCGCCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp CTGAGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCTGTACCGGCTGGCCTTaGAGCCTGGTAGGATGTCAT +
Preference number: 4 (lower is better)
Translates to: LSGTSWTVECWNAWLLCRCTGWP*SLVGCH
Trigger: ATGACATCCTACCAGGCTGCAAGGCCAGCCGGTACA...GCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp CTGTCCCTCTTGAATCCCATGGGAAACAGGCCCCAAGATCAGGGGACCTGGAGTGGCACACATCCACGATaGAGATGGCACGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LSLLNPMGNRPQDQGTWSGTHPR*RWHAPG
Trigger: CCCTGGGGCGTGCCATCTGCATCGTGGATGTGTGCC...ACTCCAGGTCCCCTGATCTTGGGGCCTGTTTCCCATGGGATTCAAGAGGGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR GCA 90 bp AATTGGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGAGGGGCACACATCCACGATaGAGATGGCACGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: NWLRAWTAGASQVDAFLRGTHPR*RWHAPG
Trigger: CCCTGGGGCGTGCCATCTGCATCGTGGATGTGTGCC...CCTCAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp TGCAGACAGCTGGGGCTACACGTGGCCAAGGCGGGGAGAAGGAATTGGCTGAGGACTCCTGCTTGTGGTTaGACACCCCATGGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: CRQLGLHVAKAGRRNWLRTPACG*TPHGCG
Trigger: GCCACAACCATGGGGTGTGCAACCACAAGCAGGAGT...CCTCAGCCAATTCCTTCTCCCCGCCTTGGCCACGTGTAGCCCCAGCTGTCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR GCA 90 bp GAACCTGGTCCTGGGATGGAGTCTTTCTGGGGATGCCCCACGTCTGTGCTGCCTTGGCAGTGGCACTCCTaGTTGTGGTTGCACACCCCA +
Preference number: 4 (lower is better)
Translates to: EPGPGMESFWGCPTSVLPWQWHS*LWLHTP
Trigger: TGGGGTGTGCAACCACAAGCAGGAGTGCCACTGCCA...AGGCAGCACAGACGTGGGGCATCCCCAGAAAGACTCCATCCCAGGACCAGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR GCA 90 bp CTGCAAAGTCAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGGATGACCTGCTTTGGTaGCTGCCGGGTGTAGACAGG +
Preference number: 4 (lower is better)
Translates to: LQSQGLGLSGTSWTVECWDDLLW*LPGVDR
Trigger: CCTGTCTACACCCGGCAGGCACCAAAGCAGGTCATC...CCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTGACTTTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR GCA 90 bp AGTCAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCAGAGTCTTTCTGGGGATaGCCCACGTCTGTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: SQGLGLSGTSWTVECWNAESFWG*PTSVLP
Trigger: AGGCAGCACAGACGTGGGGCATCCCCAGAAAGACTC...TGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR GCA 90 bp CTGCAAAGTCAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGGCTTGGGGTGCAGTCTaGTCACTGACACCCTCTCGA +
Preference number: 4 (lower is better)
Translates to: LQSQGLGLSGTSWTVECWAWGAV*SLTPSR
Trigger: TCGAGAGGGTGTCAGTGAGCAGACTGCACCCCAAGC...CCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTGACTTTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR GCA 90 bp TGCAGACAGCTGGGGCTACACGTGGCCAAGGCGGGGAGAAGGAATTGGCTGAGGGTAGACGATGATGCCTaGCAGGGTGACCAGCACAAC +
Preference number: 4 (lower is better)
Translates to: CRQLGLHVAKAGRRNWLRVDDDA*QGDQHN
Trigger: GTTGTGCTGGTCACCCTGGCAGGCATCATCGTCTAC...CCTCAGCCAATTCCTTCTCCCCGCCTTGGCCACGTGTAGCCCCAGCTGTCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445355.8
CDS-3UTR GCA 90 bp AGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGAGGTTAGAACAGGGGCCAACAGCACCCTaGTTTGGTGCCTGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: RAWTAGASQVDAFLRLEQGPTAP*FGACRV
Trigger: CACCCGGCAGGCACCAAAGCAGGGTGCTGTTGGCCC...CTGTTCTAACCTCAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485491.6
CDS-3UTR CCA 90 bp TGGCCTCCTGAACACAGCGGGAGACCAGCGGCCACCTGGAGACACGTACACACACTGTTCTTCCGCAGGTaGAGGGTGAAGTTGTGCCCT +
Preference number: 4 (lower is better)
Translates to: WPPEHSGRPAATWRHVHTLFFRR*RVKLCP
Trigger: AGGGCACAACTTCACCCTCCACCTGCGGAAGAACAG...TGTGTGTACGTGTCTCCAGGTGGCCGCTGGTCTCCCGCTGTGTTCAGGAGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp AAGGAATTGGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTAGCAGGTGCTCAGCCTaGTACACGGCGTGCCGTCCG +
Preference number: 4 (lower is better)
Translates to: KELAEGVDSRSLSGRCIPSRCSA*YTACRP
Trigger: CGGACGGCACGCCGTGTACCAGGCTGAGCACCTGCT...AGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAATTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp CGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACAGCGGGTCTCTCGGGATaGCAGAGAGTCCCCGGGCCG +
Preference number: 4 (lower is better)
Translates to: RGMLERMASLPQLLQISTAGLSG*QRVPGP
Trigger: CGGCCCGGGGACTCTCTGCCATCCCGAGAGACCCGC...TGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp GATGAGCTGTACGTTGTCATGCAGGTGCCGCCGTGTCCGTTGCCGTGCCTGCCATCGCTCCCCAGCATCTaGAACTCTGCATTGTCCACG +
Preference number: 4 (lower is better)
Translates to: DELYVVMQVPPCPLPCLPSLPSI*NSALST
Trigger: CGTGGACAATGCAGAGTTCCAGATGCTGGGGAGCGA...TGGCAGGCACGGCAACGGACACGGCGGCACCTGCATGACAACGTACAGCTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560135.5
CDS-3UTR CCA 90 bp GGAACCTGGTCCTGGGATGGAGTCTTTCTGGGGATGCCCCACGTCTGTGCTGCCTTCTTGCTGTGGTCCTaGTTCACAGCCCCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: GTWSWDGVFLGMPHVCAAFLLWS*FTAPEL
Trigger: CAGCTCAGGGGCTGTGAACCAGGACCACAGCAAGAA...GGCAGCACAGACGTGGGGCATCCCCAGAAAGACTCCATCCCAGGACCAGGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp AACCTGGTCCTGGGATGGAGTCTTTCTGGGGATGCCCCACGTCTGTGCTGCCTGTTGTGGCCCATCTCATaGGCCATGGTACAGGCCACG +
Preference number: 4 (lower is better)
Translates to: NLVLGWSLSGDAPRLCCLLWPIS*AMVQAT
Trigger: CGTGGCCTGTACCATGGCCCATGAGATGGGCCACAA...CAGGCAGCACAGACGTGGGGCATCCCCAGAAAGACTCCATCCCAGGACCAGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp ACTGACACCCTCTCGAAGAGCACGCAGGGGAACCTGGTCCTGGGATGGAGTCTTTGGCAGCGGCAGCCCTaGACGTTCTCATCATGGTCC +
Preference number: 4 (lower is better)
Translates to: TDTLSKSTQGNLVLGWSLWQRQP*TFSSWS
Trigger: GGACCATGATGAGAACGTCCAGGGCTGCCGCTGCCA...AAGACTCCATCCCAGGACCAGGTTCCCCTGCGTGCTCTTCGAGAGGGTGTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp GACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCGCCTCGAAGCGTTCCTaGCAGCGGCAGCCCTGGACG +
Preference number: 4 (lower is better)
Translates to: DRGMLERMASLPQLLQISASKRS*QRQPWT
Trigger: CGTCCAGGGCTGCCGCTGCCAGGAACGCTTCGAGGC...GGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp TCACTGACACCCTCTCGAAGAGCACGCAGGGGAACCTGGTCCTGGGATGGAGTCACATCCTGGGGAAACTaGAGCCAATGCTGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: SLTPSRRARRGTWSWDGVTSWGN*SQCCPP
Trigger: TGGCGGGCAGCATTGGCTCCAGTTTCCCCAGGATGT...GACTCCATCCCAGGACCAGGTTCCCCTGCGTGCTCTTCGAGAGGGTGTCAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp GAACCTGGTCCTGGGATGGAGTCTTTCTGGGGATGCCCCACGTCTGTGCTGCCTACATCCTGGGGAAACTaGAGCCAATGCTGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: EPGPGMESFWGCPTSVLPTSWGN*SQCCPP
Trigger: TGGCGGGCAGCATTGGCTCCAGTTTCCCCAGGATGT...AGGCAGCACAGACGTGGGGCATCCCCAGAAAGACTCCATCCCAGGACCAGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp GGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCGTACCGTGCGCACACTaGGCCCCCTCAGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GPWNAGTHGFSAATSPNFVPCAH*APSASW
Trigger: CCAGCTGGCTGAGGGGGCCCAGTGTGCGCACGGTAC...GAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp CAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATGGCACACATGTCCTTCTTaGGACGGCACAGCTCACCAG +
Preference number: 4 (lower is better)
Translates to: QGLGLSGTSWTVECWNAWHTCPS*DGTAHQ
Trigger: CTGGTGAGCTGTGCCGTCCCAAGAAGGACATGTGTG...CCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp GAATTGGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGAGACTGCTGGGCCAGTGTaGGACAGGCCCCGTTGTAGC +
Preference number: 4 (lower is better)
Translates to: ELAEGVDSRSLSGRCIPETAGPV*DRPRCS
Trigger: GCTACAACGGGGCCTGTCCCACACTGGCCCAGCAGT...CTCAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp AGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGAGGTTAGAACAGAAGGCCTGGCACTGCTaGGCCAGTGTGGGACAGGCC +
Preference number: 4 (lower is better)
Translates to: RAWTAGASQVDAFLRLEQKAWHC*ASVGQA
Trigger: GGCCTGTCCCACACTGGCCCAGCAGTGCCAGGCCTT...CTGTTCTAACCTCAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp CTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGCGCAGAAGGCCTGGCACTGCTaGGCCAGTGTGGGACAGGCC +
Preference number: 4 (lower is better)
Translates to: LERMASLPQLLQISTQAQKAWHC*ASVGQA
Trigger: GGCCTGTCCCACACTGGCCCAGCAGTGCCAGGCCTT...CTGCGCCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp CAGCAGCTGAGCCTGCAAAGTCAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCTGGCACTCCTGCTTGTaGTTGCACACCCCATGGTTG +
Preference number: 4 (lower is better)
Translates to: QQLSLQSQGLGLSGTSWTWHSCL*LHTPWL
Trigger: CAACCATGGGGTGTGCAACCACAAGCAGGAGTGCCA...GGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTGACTTTGCAGGCTCAGCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp CTGCAAAGTCAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGTTTGACTGGGGGCACTaGGGGTGCGAACGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: LQSQGLGLSGTSWTVECWFDWGH*GCERWL
Trigger: AAGCCAACGTTCGCACCCCCAGTGCCCCCAGTCAAA...CCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTGACTTTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp CTGAGCCTGCAAAGTCAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCGTGGAACTTCAGGGCAACCTTTaGGCCAACAGCACCCTCAGC +
Preference number: 4 (lower is better)
Translates to: LSLQSQGLGLSGTSWTVELQGNL*ANSTLS
Trigger: GCTGAGGGTGCTGTTGGCCCAAAGGTTGCCCTGAAG...TTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTGACTTTGCAGGCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp CTAGGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATGGCTTCTCCTTGCTTCCTCTGGATaGGGGGCTTCAGGGCAACCT +
Preference number: 4 (lower is better)
Translates to: LGLSGTSWTVECWNAWLLLASSG*GASGQP
Trigger: AGGTTGCCCTGAAGCCCCCCATCCAGAGGAAGCAAG...GAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp AACCTGGTCCTGGGATGGAGTCTTTCTGGGGATGCCCCACGTCTGTGCTGCCTGCTGAGCGGCACTAGCTaGACCGTGGAATGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: NLVLGWSLSGDAPRLCCLLSGTS*TVECWN
Trigger: GTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAG...CAGGCAGCACAGACGTGGGGCATCCCCAGAAAGACTCCATCCCAGGACCAGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp CTAGGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATGGCTTCTCCTGAGCGGCACTAGCTaGACCGTGGAATGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: LGLSGTSWTVECWNAWLLLSGTS*TVECWN
Trigger: GTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAG...GAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp AGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCAACAATTGGCTGAGGGCGTaGACAGCAGGAGCCTCTCAG +
Preference number: 4 (lower is better)
Translates to: SGTSWTVECWNAWLLCRNNWLRA*TAGASQ
Trigger: CTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAATT...GTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp AGTCAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCAAATTGGCTGAGGGCGTaGACAGCAGGAGCCTCTCAG +
Preference number: 4 (lower is better)
Translates to: SQGLGLSGTSWTVECWNANWLRA*TAGASQ
Trigger: CTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAATT...TGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp TTGGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGAGGTTCAGCTCATCCCAGCCTaGTGCCTGCAGACAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LAEGVDSRSLSGRCIPEVQLIPA*CLQTAG
Trigger: CCCAGCTGTCTGCAGGCACCAGGCTGGGATGAGCTG...AACCTCAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp CGAAGAGCACGCAGGGGAACCTGGTCCTGGGATGGAGTCTTTCTGGGGATGCCCAACCTGGTCCTGGGATaGAGTCTTTCTGGGGATGCC +
Preference number: 4 (lower is better)
Translates to: RRARRGTWSWDGVFLGMPNLVLG*SLSGDA
Trigger: GGCATCCCCAGAAAGACTCCATCCCAGGACCAGGTT...GGGCATCCCCAGAAAGACTCCATCCCAGGACCAGGTTCCCCTGCGTGCTCTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp CTGAGCCTGCAAAGTCAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCGTGGAAAGGGGAACCTGGTCCTaGGATGGAGTCTTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: LSLQSQGLGLSGTSWTVERGTWS*DGVFLG
Trigger: CCCCAGAAAGACTCCATCCCAGGACCAGGTTCCCCT...TTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTGACTTTGCAGGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp CTGAGCCTGCAAAGTCAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCGTGGAAGCACGCAGGGGAACCTaGTCCTGGGATGGAGTCTTT +
Preference number: 4 (lower is better)
Translates to: LSLQSQGLGLSGTSWTVEARRGT*SWDGVF
Trigger: AAAGACTCCATCCCAGGACCAGGTTCCCCTGCGTGC...TTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTGACTTTGCAGGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp TCACTGACACCCTCTCGAAGAGCACGCAGGGGAACCTGGTCCTGGGATGGAGTCGCACGCAGGGGAACCTaGTCCTGGGATGGAGTCTTT +
Preference number: 4 (lower is better)
Translates to: SLTPSRRARRGTWSWDGVARRGT*SWDGVF
Trigger: AAAGACTCCATCCCAGGACCAGGTTCCCCTGCGTGC...GACTCCATCCCAGGACCAGGTTCCCCTGCGTGCTCTTCGAGAGGGTGTCAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp CTAGGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATGGCTTCTCGCCCCATTGTGGTCTTaGGAGCCACGTTCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: LGLSGTSWTVECWNAWLLAPLWS*EPRSCS
Trigger: TGAGCAGGAACGTGGCTCCCAAGACCACAATGGGGC...GAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445355.8
ENST00000485491.6
CDS-3UTR TCA 90 bp CGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACAGCTGAGGCTGGCGGCTaGGTCCGGGTACCCCTCTAC +
Preference number: 4 (lower is better)
Translates to: RGMLERMASLPQLLQISTAEAGG*VRVPLY
Trigger: GTAGAGGGGTACCCGGACTCAGCCGCCAGCCTCAGC...TGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR TCA 90 bp TGGCCTCCTGAACACAGCGGGAGACCAGCGGCCACCTGGAGACACGTACACACATATAGCTTGTCCACGTaGTTCACCACCTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: WPPEHSGRPAATWRHVHTYSLST*FTTSST
Trigger: GGTGCTGGAGGTGGTGAATCACGTGGACAAGCTATA...TGTGTGTACGTGTCTCCAGGTGGCCGCTGGTCTCCCGCTGTGTTCAGGAGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR TCA 90 bp GGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACTGGGGTCGGGGCTaGCGTGGAACCTGTCCTGAC +
Preference number: 4 (lower is better)
Translates to: GPWNAGTHGFSAATSPNFHWGRG*RGTCPD
Trigger: GTCAGGACAGGTTCCACGTCAGCCCCGACCCCAGTG...GAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp ACTGACACCCTCTCGAAGAGCACGCAGGGGAACCTGGTCCTGGGATGGAGTCTTAACACGACCTCATACTaGTCCATGAGGGCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: TDTLSKSTQGNLVLGWSLNTTSY*SMRAQG
Trigger: GCCCTGGGCCCTCATGGAGCAGTATGAGGTCGTGTT...AAGACTCCATCCCAGGACCAGGTTCCCCTGCGTGCTCTTCGAGAGGGTGTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR GCA 90 bp AATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGCTCCTGCCCGCGAGGCTaGTCCGTCACCTCGGAGCCA +
Preference number: 4 (lower is better)
Translates to: NAGTHGFSAATSPNFHTGSCPRG*SVTSEP
Trigger: TGGCTCCGAGGTGACGGAGCAGCCTCGCGGGCAGGA...GCCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp GAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGTCCTGCCCGCGAGGCTaGTCCGTCACCTCGGAGCCA +
Preference number: 4 (lower is better)
Translates to: ECWNAWLLCRNFSKFPHRSCPRG*SVTSEP
Trigger: TGGCTCCGAGGTGACGGAGCAGCCTCGCGGGCAGGA...CCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp AATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGCTGCCGCCGTGTCCGTTaGCGTGCCTGCCAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: NAGTHGFSAATSPNFHTGCRRVR*RACQVR
Trigger: CCTGACCTGGCAGGCACGGCAACGGACACGGCGGCA...GCCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp ACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGCGCAGGTGCCACGTTGTCATGCAGGTaGCGCCGTGTCCGTTGCCGT +
Preference number: 4 (lower is better)
Translates to: THGFSAATSPNFHTGAGATLSCR*RRVRCR
Trigger: ACGGCAACGGACACGGCGGCACCTGCATGACAACGT...GGCACCTGCGCCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp GCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGCGCAGGTGCCCCAGCTGTACGTTGTCATaGAGGTGCCGCCGTGTCCGT +
Preference number: 4 (lower is better)
Translates to: AWLLCRNFSKFPHRRRCPSCTLS*RCRRVR
Trigger: ACGGACACGGCGGCACCTGCATGACAACGTACAGCT...GGGGCACCTGCGCCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp AATTGGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGAGGCGCCCACGGGGTTCTTaGTGTGGTCCTGGTTCACAG +
Preference number: 4 (lower is better)
Translates to: NWLRAWTAGASQVDAFLRRPRGS*CGPGSQ
Trigger: CTGTGAACCAGGACCACAGCAAGAACCCCGTGGGCG...CCTCAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp AAGGAATTGGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGCGAGGCACACCGACTaGGGCCGCTCCAAAAAGCTC +
Preference number: 4 (lower is better)
Translates to: KELAEGVDSRSLSGRCIPARHTD*GRSKKL
Trigger: GAGCTTTTTGGAGCGGCCGCAGTCGGTGTGCCTCGC...AGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAATTCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp AGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGAGGTTAGAACAGGCGAGGCACACCGACTaGGGCCGCTCCAAAAAGCTC +
Preference number: 4 (lower is better)
Translates to: RAWTAGASQVDAFLRLEQARHTD*GRSKKL
Trigger: GAGCTTTTTGGAGCGGCCGCAGTCGGTGTGCCTCGC...CTGTTCTAACCTCAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp TTGGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGAGGTTCAGCCGGCTTCACCTTaGACTCCTGGCAGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: LAEGVDSRSLSGRCIPEVQPASP*TPGSRY
Trigger: GTACCTGCTGCCAGGAGTGCAAGGTGAAGCCGGCTG...AACCTCAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp AACCTGGTCCTGGGATGGAGTCTTTCTGGGGATGCCCCACGTCTGTGCTGCCTGTGCCCACCCTTGCACTaGAGAACGCCACACATGTCA +
Preference number: 4 (lower is better)
Translates to: NLVLGWSLSGDAPRLCCLCPPLH*RTPHMS
Trigger: TGACATGTGTGGCGTTCTGCAGTGCAAGGGTGGGCA...CAGGCAGCACAGACGTGGGGCATCCCCAGAAAGACTCCATCCCAGGACCAGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR GCA 90 bp AGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTGCCCACCCTTGCACTaGAGAACGCCACACATGTCA +
Preference number: 4 (lower is better)
Translates to: SGTSWTVECWNAWLLCRNCPPLH*RTPHMS
Trigger: TGACATGTGTGGCGTTCTGCAGTGCAAGGGTGGGCA...GTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp AATTGGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGAGGGCTGCTGCCCACCCTTaGACTGCAGAACGCCACACA +
Preference number: 4 (lower is better)
Translates to: NWLRAWTAGASQVDAFLRAAAHP*TAERHT
Trigger: TGTGTGGCGTTCTGCAGTGCAAGGGTGGGCAGCAGC...CCTCAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp AAGGAATTGGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTCTGGTCCACACCGGGTaGCCTCGGGCACTGGTTCAT +
Preference number: 4 (lower is better)
Translates to: KELAEGVDSRSLSGRCIPLVHTG*PRALVH
Trigger: ATGAACCAGTGCCCGAGGGCACCCGGTGTGGACCAG...AGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAATTCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp TCGAAGAGCACGCAGGGGAACCTGGTCCTGGGATGGAGTCTTTCTGGGGATGCCACTCCTGCTTGTGGTTaGACACCCCATGGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: SKSTQGNLVLGWSLSGDATPACG*TPHGCG
Trigger: GCCACAACCATGGGGTGTGCAACCACAAGCAGGAGT...GGCATCCCCAGAAAGACTCCATCCCAGGACCAGGTTCCCCTGCGTGCTCTTCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR GCA 90 bp GAACCTGGTCCTGGGATGGAGTCTTTCTGGGGATGCCCCACGTCTGTGCTGCCTAGCTGGACCGTGGAATaGTGGAACGCATGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: EPGPGMESFWGCPTSVLPSWTVE*WNAWLL
Trigger: GAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCT...AGGCAGCACAGACGTGGGGCATCCCCAGAAAGACTCCATCCCAGGACCAGGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR GCA 90 bp GCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGCGCAGGTGCCCCGCTTGGGGTGCAGTCTaGTCACTGACACCCTCTCGA +
Preference number: 4 (lower is better)
Translates to: AWLLCRNFSKFPHRRRCPAWGAV*SLTPSR
Trigger: TCGAGAGGGTGTCAGTGAGCAGACTGCACCCCAAGC...GGGGCACCTGCGCCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR GCA 90 bp GAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGAGGTTAGAACACTCCCGGACGCTGCGTaGACCTCAGTCAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: EGVDSRSLSGRCIPEVRTLPDAA*TSVSSF
Trigger: GAAGCTGCTGACTGAGGTGCACGCAGCGTCCGGGAG...TGTTCTAACCTCAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp GACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCGAGGCTCCCGGACGCTaGGTGCACCTCAGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: DRGMLERMASLPQLLQISEAPGR*VHLSQQ
Trigger: CTGCTGACTGAGGTGCACGCAGCGTCCGGGAGCCTC...GGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp ACTGACACCCTCTCGAAGAGCACGCAGGGGAACCTGGTCCTGGGATGGAGTCTTGGTGACCAGCACAACTaGCAGGAGCACCAGAACCAC +
Preference number: 4 (lower is better)
Translates to: TDTLSKSTQGNLVLGWSLGDQHN*QEHQNH
Trigger: GTGGTTCTGGTGCTCCTGGCAGTTGTGCTGGTCACC...AAGACTCCATCCCAGGACCAGGTTCCCCTGCGTGCTCTTCGAGAGGGTGTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445355.8
CDS-3UTR GCA 90 bp TGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGCGCAGGCGTTCCTGCTCAGGATaGGGCTCCGGGCTTTGCGGT +
Preference number: 4 (lower is better)
Translates to: WNAWLLCRNFSKFPHRRRRSCSG*GSGLCG
Trigger: ACCGCAAAGCCCGGAGCCGCATCCTGAGCAGGAACG...CCTGCGCCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp TTGGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGAGGTTCTCACCCTCTCTGGGTaGAGGCCCAGGCAGCATCAT +
Preference number: 4 (lower is better)
Translates to: LAEGVDSRSLSGRCIPEVLTLSG*RPRQHH
Trigger: ATGATGCTGCCTGGGCCTGCACCCAGAGAGGGTGAG...AACCTCAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485491.6
CDS-3UTR GCA 90 bp CTGCAAAGTCAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGTGGCAGTGGCACTCCTaGTTGTGGTTGCACACCTTC +
Preference number: 4 (lower is better)
Translates to: LQSQGLGLSGTSWTVECWWQWHS*LWLHTF
Trigger: GAAGGTGTGCAACCACAAGCAGGAGTGCCACTGCCA...CCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTGACTTTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485491.6
CDS-3UTR CCA 90 bp AGGAATTGGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGGTAGCTCACCCTCTCTaGGTGCAGGCCCAAGTGGGA +
Preference number: 4 (lower is better)
Translates to: RNWLRAWTAGASQVDAFLVAHPL*VQAQVG
Trigger: TCCCACTTGGGCCTGCACCCAGAGAGGGTGAGCTAC...CAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAATTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp CTGAGCCTGCAAAGTCAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCGTGGAACTGTTCTTCCGCAGGTaGAGGGTGAAGTTGTGCCCT +
Preference number: 4 (lower is better)
Translates to: LSLQSQGLGLSGTSWTVELFFRR*RVKLCP
Trigger: AGGGCACAACTTCACCCTCCACCTGCGGAAGAACAG...TTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTGACTTTGCAGGCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp CCGATGACGCACGGCTGCTTCGCTCCCCAGCATCTGGAACTCTGCATTGTCCACCTGTTCTTCCGCAGGTaGAGGGTGAAGTTGTGCCCT +
Preference number: 4 (lower is better)
Translates to: PMTHGCFAPQHLELCIVHLFFRR*RVKLCP
Trigger: AGGGCACAACTTCACCCTCCACCTGCGGAAGAACAG...GTGGACAATGCAGAGTTCCAGATGCTGGGGAGCGAAGCAGCCGTGCGTCATCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560135.5
CDS-3UTR CCA 90 bp GAACCTGGTCCTGGGATGGAGTCTTTCTGGGGATGCCCCACGTCTGTGCTGCCTTCACCTCGGAGCCATTaGCAGCCGTATAGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: EPGPGMESFWGCPTSVLPSPRSH*QPYRSL
Trigger: CAGAGACCTATACGGCTGCCAATGGCTCCGAGGTGA...AGGCAGCACAGACGTGGGGCATCCCCAGAAAGACTCCATCCCAGGACCAGGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp AGTCAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATCGCTCCCCAGCATCTaGAACTCTGCATTGTCCACG +
Preference number: 4 (lower is better)
Translates to: SQGLGLSGTSWTVECWNASLPSI*NSALST
Trigger: CGTGGACAATGCAGAGTTCCAGATGCTGGGGAGCGA...TGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp ACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGCGCAGGTGCCAGCTGTGGGAGCACATaGCGGACACCCTGGCAAACC +
Preference number: 4 (lower is better)
Translates to: THGFSAATSPNFHTGAGASCGST*RTPWQT
Trigger: GGTTTGCCAGGGTGTCCGCCATGTGCTCCCACAGCT...GGCACCTGCGCCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp CTGAGCCTGCAAAGTCAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCGTGGAATTCTTGCTGTGGTCCTaGTTCACAGCCCCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: LSLQSQGLGLSGTSWTVEFLLWS*FTAPEL
Trigger: CAGCTCAGGGGCTGTGAACCAGGACCACAGCAAGAA...TTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTGACTTTGCAGGCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp ATGTGGCCTCCTGAACACAGCGGGAGACCAGCGGCCACCTGGAGACACGTACACTGGACGTTCTCATCATaGTCCATGCCCAGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: MWPPEHSGRPAATWRHVHWTFSS*SMPRLW
Trigger: CCACAACCTGGGCATGGACCATGATGAGAACGTCCA...GTGTACGTGTCTCCAGGTGGCCGCTGGTCTCCCGCTGTGTTCAGGAGGCCACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp CAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATGGTGGACGTTCTCATCATaGTCCATGCCCAGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: QGLGLSGTSWTVECWNAWWTFSS*SMPRLW
Trigger: CCACAACCTGGGCATGGACCATGATGAGAACGTCCA...CCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp AATTGGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGAGGTGGCAGCGGCAGCCCTaGACGTTCTCATCATGGTCC +
Preference number: 4 (lower is better)
Translates to: NWLRAWTAGASQVDAFLRWQRQP*TFSSWS
Trigger: GGACCATGATGAGAACGTCCAGGGCTGCCGCTGCCA...CCTCAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp GCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGCGCAGGTGCCCCACATCCTGGGGAAACTaGAGCCAATGCTGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: AWLLCRNFSKFPHRRRCPTSWGN*SQCCPP
Trigger: TGGCGGGCAGCATTGGCTCCAGTTTCCCCAGGATGT...GGGGCACCTGCGCCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp CTGCAAAGTCAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGCACACATGTCCTTCTTaGGACGGCACAGCTCACCAG +
Preference number: 4 (lower is better)
Translates to: LQSQGLGLSGTSWTVECWHTCPS*DGTAHQ
Trigger: CTGGTGAGCTGTGCCGTCCCAAGAAGGACATGTGTG...CCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTGACTTTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp AGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGAGGTTAGAACAGACTGCTGGGCCAGTGTaGGACAGGCCCCGTTGTAGC +
Preference number: 4 (lower is better)
Translates to: RAWTAGASQVDAFLRLEQTAGPV*DRPRCS
Trigger: GCTACAACGGGGCCTGTCCCACACTGGCCCAGCAGT...CTGTTCTAACCTCAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp TGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGCGCAGGACTGCTGGGCCAGTGTaGGACAGGCCCCGTTGTAGC +
Preference number: 4 (lower is better)
Translates to: WNAWLLCRNFSKFPHRRRTAGPV*DRPRCS
Trigger: GCTACAACGGGGCCTGTCCCACACTGGCCCAGCAGT...CCTGCGCCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp TTCCTAAGCTTAAACACACACAAAGCTGGGGCTGTCCCTCTTGAATCCCATGGGGGCAGCCTGCCCACCTaGCCCCCAGAAGGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: FLSLNTHKAGAVPLESHGGSLPT*PPEGLA
Trigger: TGCCAGGCCTTCTGGGGGCCAGGTGGGCAGGCTGCC...CCCATGGGATTCAAGAGGGACAGCCCCAGCTTTGTGTGTGTTTAAGCTTAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp AGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGAGGTTAGAACAGCAGCCCGCGTGGCAGTaGCACTCCTGCTTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: RAWTAGASQVDAFLRLEQQPAWQ*HSCLWL
Trigger: CAACCACAAGCAGGAGTGCCACTGCCACGCGGGCTG...CTGTTCTAACCTCAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp TTGGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGAGGTTAGGAACTGGGAAGGGTaGGCTGGACACAGTGACCGG +
Preference number: 4 (lower is better)
Translates to: LAEGVDSRSLSGRCIPEVRNWEG*AGHSDR
Trigger: CCGGTCACTGTGTCCAGCCCACCCTTCCCAGTTCCT...AACCTCAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp GCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGCGCAGGTGCCCCTTTGACTGGGGGCACTaGGGGTGCGAACGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: AWLLCRNFSKFPHRRRCPFDWGH*GCERWL
Trigger: AAGCCAACGTTCGCACCCCCAGTGCCCCCAGTCAAA...GGGGCACCTGCGCCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp CTAGGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATGGCTTCTCTGGACCGTGGAATGCTaGAACGCATGGCTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: LGLSGTSWTVECWNAWLLWTVEC*NAWLLC
Trigger: GCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCA...GAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp TGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGCGCAGGCAGCTCATCCCAGCCTaGTGCCTGCAGACAGCTGGG +
Preference number: 4 (lower is better)
Translates to: WNAWLLCRNFSKFPHRRRQLIPA*CLQTAG
Trigger: CCCAGCTGTCTGCAGGCACCAGGCTGGGATGAGCTG...CCTGCGCCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp AATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGCCGGCTGGCAGCCTGGTaGAACAGGGGGTTGGAGCGC +
Preference number: 4 (lower is better)
Translates to: NAGTHGFSAATSPNFHTGRLAAW*NRGLER
Trigger: GCGCTCCAACCCCCTGTTCCACCAGGCTGCCAGCCG...GCCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000445355.8
ENST00000485491.6
CDS-3UTR TCA 90 bp AATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGCACCTCCAGCACCCGATaGCGCACGGCTGCTTCGCTC +
Preference number: 4 (lower is better)
Translates to: NAGTHGFSAATSPNFHTGTSSTR*RTAASL
Trigger: GAGCGAAGCAGCCGTGCGTCATCGGGTGCTGGAGGT...GCCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR TCA 90 bp ACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGCGCAGGTGCCGTATATGTGGCCTCCTaGACACAGCGGGAGACCAGC +
Preference number: 4 (lower is better)
Translates to: THGFSAATSPNFHTGAGAVYVAS*TQRETS
Trigger: GCTGGTCTCCCGCTGTGTTCAGGAGGCCACATATAC...GGCACCTGCGCCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR TCA 90 bp GAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGGATCAGGTGCAGGTCTaGCCCCACCTGAGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: ECWNAWLLCRNFSKFPHRDQVQV*PHLRPA
Trigger: TGCCGGCCTCAGGTGGGGTCAGACCTGCACCTGATC...CCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485491.6
CDS-3UTR GCA 90 bp AAGGAATTGGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTTGGAGGGTGAAGTTGTaGCCTGTGGCCCCAAGGACG +
Preference number: 4 (lower is better)
Translates to: KELAEGVDSRSLSGRCIPWRVKL*PVAPRT
Trigger: CGTCCTTGGGGCCACAGGGCACAACTTCACCCTCCA...AGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAATTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp GAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGAGGTTAGAACACGCCCACGGGGTTCTTaGTGTGGTCCTGGTTCACAG +
Preference number: 4 (lower is better)
Translates to: EGVDSRSLSGRCIPEVRTRPRGS*CGPGSQ
Trigger: CTGTGAACCAGGACCACAGCAAGAACCCCGTGGGCG...TGTTCTAACCTCAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp GCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGCGCAGGTGCCCCTGTACCGGCTGGCCTTaGAGCCTGGTAGGATGTCAT +
Preference number: 4 (lower is better)
Translates to: AWLLCRNFSKFPHRRRCPCTGWP*SLVGCH
Trigger: ATGACATCCTACCAGGCTGCAAGGCCAGCCGGTACA...GGGGCACCTGCGCCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp CTGGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTCTGGTCCACACCGGGTaGCCTCGGGCACTGGTTCAT +
Preference number: 4 (lower is better)
Translates to: LDRGMLERMASLPQLLQILVHTG*PRALVH
Trigger: ATGAACCAGTGCCCGAGGGCACCCGGTGTGGACCAG...AATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp GACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCCTGGTCCACACCGGGTaGCCTCGGGCACTGGTTCAT +
Preference number: 4 (lower is better)
Translates to: DRGMLERMASLPQLLQISLVHTG*PRALVH
Trigger: ATGAACCAGTGCCCGAGGGCACCCGGTGTGGACCAG...GGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp CTAGCTGGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAGTTGGCTTGATGACCTaGTTTGGTGCCTGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: LAGPWNAGTHGFSAATSPVGLMT*FGACRV
Trigger: CACCCGGCAGGCACCAAAGCAGGTCATCAAGCCAAC...TGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR GCA 90 bp CTGGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTCTCCCGGACGCTGCGTaGACCTCAGTCAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LDRGMLERMASLPQLLQILPDAA*TSVSSF
Trigger: GAAGCTGCTGACTGAGGTGCACGCAGCGTCCGGGAG...AATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp CGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACAAGCAGGTGCTCAGCCTaGTACACGGCGTGCCGTCCG +
Preference number: 4 (lower is better)
Translates to: RGMLERMASLPQLLQISTSRCSA*YTACRP
Trigger: CGGACGGCACGCCGTGTACCAGGCTGAGCACCTGCT...TGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp CTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGCGCAGTGGCAGCGGCAGCCCTaGACGTTCTCATCATGGTCC +
Preference number: 4 (lower is better)
Translates to: LERMASLPQLLQISTQAQWQRQP*TFSSWS
Trigger: GGACCATGATGAGAACGTCCAGGGCTGCCGCTGCCA...CTGCGCCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp GAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGAGGTTAGAACAAGGAACTGGGAAGGGTaGGCTGGACACAGTGACCGG +
Preference number: 4 (lower is better)
Translates to: EGVDSRSLSGRCIPEVRTRNWEG*AGHSDR
Trigger: CCGGTCACTGTGTCCAGCCCACCCTTCCCAGTTCCT...TGTTCTAACCTCAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp GACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCAACAGCACCCTCAGCTaGACCAGGGTTGGCCGCACC +
Preference number: 4 (lower is better)
Translates to: DRGMLERMASLPQLLQISNSTLS*TRVGRT
Trigger: GGTGCGGCCAACCCTGGTCCAGCTGAGGGTGCTGTT...GGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp CTGAGCCTGCAAAGTCAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCGTGGAAGAATGCTGGAACGCATaGCTTCTCTGCCGCAACTTC +
Preference number: 4 (lower is better)
Translates to: LSLQSQGLGLSGTSWTVEECWNA*LLCRNF
Trigger: GAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTC...TTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTGACTTTGCAGGCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp ACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGCGCAGGTGCCGAGGGGCTGTATATGTaGCCTCCTGAACACAGCGGG +
Preference number: 4 (lower is better)
Translates to: THGFSAATSPNFHTGAGAEGLYM*PPEHSG
Trigger: CCCGCTGTGTTCAGGAGGCCACATATACAGCCCCTC...GGCACCTGCGCCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp AATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGCCACGTCTGTGCTGCCTaGAACCGGGTGCCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: NAGTHGFSAATSPNFHTGHVCAA*NRVPRA
Trigger: TGCCCTGGGCACCCGGTTCCAGGCAGCACAGACGTG...GCCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp CTGTCCCTCTTGAATCCCATGGGAAACAGGCCCCAAGATCAGGGGACCTGGAGTGGGATGGAGTCTTTCTaGGGATGCCCCACGTCTGTG +
Preference number: 4 (lower is better)
Translates to: LSLLNPMGNRPQDQGTWSGMESF*GCPTSV
Trigger: CACAGACGTGGGGCATCCCCAGAAAGACTCCATCCC...ACTCCAGGTCCCCTGATCTTGGGGCCTGTTTCCCATGGGATTCAAGAGGGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp GAATTGGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGAGAGGGGAACCTGGTCCTaGGATGGAGTCTTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: ELAEGVDSRSLSGRCIPERGTWS*DGVFLG
Trigger: CCCCAGAAAGACTCCATCCCAGGACCAGGTTCCCCT...CTCAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp GAATTGGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGAGGCCCCATTGTGGTCTTaGGAGCCACGTTCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: ELAEGVDSRSLSGRCIPEAPLWS*EPRSCS
Trigger: TGAGCAGGAACGTGGCTCCCAAGACCACAATGGGGC...CTCAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp GAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGAGGTTAGAACAGGTGGAACAGGGGGTTaGAGCGCCCCATTGTGGTCT +
Preference number: 4 (lower is better)
Translates to: EGVDSRSLSGRCIPEVRTGGTGG*SAPLWS
Trigger: AGACCACAATGGGGCGCTCCAACCCCCTGTTCCACC...TGTTCTAACCTCAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000445355.8
ENST00000485491.6
CDS-3UTR TCA 90 bp GAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGCTGGTTCACAGCCCCTaGGCTGTGGGAGCACATGGC +
Preference number: 4 (lower is better)
Translates to: ECWNAWLLCRNFSKFPHRLVHSP*AVGAHG
Trigger: GCCATGTGCTCCCACAGCTCAGGGGCTGTGAACCAG...CCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR TCA 90 bp AGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGAGGTTAGAACAGCCTGGCTGCAGTCACTaGACATCCTGGGGAAACTGG +
Preference number: 4 (lower is better)
Translates to: RAWTAGASQVDAFLRLEQPGCSH*TSWGNW
Trigger: CCAGTTTCCCCAGGATGTTCAGTGACTGCAGCCAGG...CTGTTCTAACCTCAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp GAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGAGGTTAGAACAAACACGACCTCATACTaGTCCATGAGGGCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: EGVDSRSLSGRCIPEVRTNTTSY*SMRAQG
Trigger: GCCCTGGGCCCTCATGGAGCAGTATGAGGTCGTGTT...TGTTCTAACCTCAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR GCA 90 bp ATGTGGCCTCCTGAACACAGCGGGAGACCAGCGGCCACCTGGAGACACGTACACCAGCATCTGGAACTCTaGATTGTCCACGACCACATA +
Preference number: 4 (lower is better)
Translates to: MWPPEHSGRPAATWRHVHQHLEL*IVHDHI
Trigger: TATGTGGTCGTGGACAATGCAGAGTTCCAGATGCTG...GTGTACGTGTCTCCAGGTGGCCGCTGGTCTCCCGCTGTGTTCAGGAGGCCACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR GCA 90 bp GTGATGAGCTGTACGTTGTCATGCAGGTGCCGCCGTGTCCGTTGCCGTGCCTGCCAGCATCTGGAACTCTaGATTGTCCACGACCACATA +
Preference number: 4 (lower is better)
Translates to: VMSCTLSCRCRRVRCRACQHLEL*IVHDHI
Trigger: TATGTGGTCGTGGACAATGCAGAGTTCCAGATGCTG...GCAGGCACGGCAACGGACACGGCGGCACCTGCATGACAACGTACAGCTCATCAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560135.5
CDS-3UTR GCA 90 bp GAATTGGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGAGAGCTGGACCGTGGAATaGTGGAACGCATGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: ELAEGVDSRSLSGRCIPESWTVE*WNAWLL
Trigger: GAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCT...CTCAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp GGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCGTCGGGAGCTTGGGGTaGAGTCTGCTCACTGACACC +
Preference number: 4 (lower is better)
Translates to: GPWNAGTHGFSAATSPNFVGSLG*SLLTDT
Trigger: GGTGTCAGTGAGCAGACTGCACCCCAAGCTCCCGAC...GAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR GCA 90 bp CTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGCGCAGGGTGACCAGCACAACTaGCAGGAGCACCAGAACCAC +
Preference number: 4 (lower is better)
Translates to: LERMASLPQLLQISTQAQGDQHN*QEHQNH
Trigger: GTGGTTCTGGTGCTCCTGGCAGTTGTGCTGGTCACC...CTGCGCCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp CGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACAACAGCCCCTGAGCTGTaGGAGCACATGGCGGACACC +
Preference number: 4 (lower is better)
Translates to: RGMLERMASLPQLLQISTTAPEL*EHMADT
Trigger: GGTGTCCGCCATGTGCTCCCACAGCTCAGGGGCTGT...TGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp AAGGAATTGGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTTTGTGGCCCATCTCATaGGCCATGGTACAGGCCACG +
Preference number: 4 (lower is better)
Translates to: KELAEGVDSRSLSGRCIPLWPIS*AMVQAT
Trigger: CGTGGCCTGTACCATGGCCCATGAGATGGGCCACAA...AGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAATTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp AGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGAGGTTAGAACAGTTCACCTTGCACTCCTaGCAGCAGGTACCGTGCGCA +
Preference number: 4 (lower is better)
Translates to: RAWTAGASQVDAFLRLEQFTLHS*QQVPCA
Trigger: TGCGCACGGTACCTGCTGCCAGGAGTGCAAGGTGAA...CTGTTCTAACCTCAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp CTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGCGCAGTCTGTGGTGAGCGCGTaGCACACATCCACGATGCAG +
Preference number: 4 (lower is better)
Translates to: LERMASLPQLLQISTQAQSVVSA*HTSTMQ
Trigger: CTGCATCGTGGATGTGTGCCACGCGCTCACCACAGA...CTGCGCCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp CAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATGGGGGCAGAGCAGTTGCTaGATCTGTAAACGTGTAAGT +
Preference number: 4 (lower is better)
Translates to: QGLGLSGTSWTVECWNAWGQSSC*ICKRVS
Trigger: ACTTACACGTTTACAGATCCAGCAACTGCTCTGCCC...CCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp AAGGAATTGGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTCACACCCCATGGTTGTaGCACTGGGCAGAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: KELAEGVDSRSLSGRCIPHTPWL*HWAEQL
Trigger: CAACTGCTCTGCCCAGTGCCACAACCATGGGGTGTG...AGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAATTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp TTGGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGAGGTTTGGCACTCCTGCTTGTaGTTGCACACCCCATGGTTG +
Preference number: 4 (lower is better)
Translates to: LAEGVDSRSLSGRCIPEVWHSCL*LHTPWL
Trigger: CAACCATGGGGTGTGCAACCACAAGCAGGAGTGCCA...AACCTCAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp GGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCAGGAACTGGGAAGGGTaGGCTGGACACAGTGACCGG +
Preference number: 4 (lower is better)
Translates to: GPWNAGTHGFSAATSPNFRNWEG*AGHSDR
Trigger: CCGGTCACTGTGTCCAGCCCACCCTTCCCAGTTCCT...GAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp ACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGCGCAGGTGCCCTTGATGACCTGCTTTaGTGCCTGCCGGGTGTAGAC +
Preference number: 4 (lower is better)
Translates to: THGFSAATSPNFHTGAGALDDLL*CLPGVD
Trigger: GTCTACACCCGGCAGGCACCAAAGCAGGTCATCAAG...GGCACCTGCGCCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp CTGTCCCTCTTGAATCCCATGGGAAACAGGCCCCAAGATCAGGGGACCTGGAGTTGGGGGTGCGAACGTTaGCTTGATGACCTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: LSLLNPMGNRPQDQGTWSWGCER*LDDLLW
Trigger: CCAAAGCAGGTCATCAAGCCAACGTTCGCACCCCCA...ACTCCAGGTCCCCTGATCTTGGGGCCTGTTTCCCATGGGATTCAAGAGGGACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp CTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGCGCAGGCACTAGCTGGACCGTaGAATGCTGGAACGCATGGC +
Preference number: 4 (lower is better)
Translates to: LERMASLPQLLQISTQAQALAGP*NAGTHG
Trigger: GCCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGC...CTGCGCCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp AGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGAGGTTAGAACAGGCACTAGCTGGACCGTaGAATGCTGGAACGCATGGC +
Preference number: 4 (lower is better)
Translates to: RAWTAGASQVDAFLRLEQALAGP*NAGTHG
Trigger: GCCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGC...CTGTTCTAACCTCAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp ACACACAAAGCTGGGGCTGTCCCTCTTGAATCCCATGGGAAACAGGCCCCAAGACTGAGCGGCACTAGCTaGACCGTGGAATGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: THKAGAVPLESHGKQAPRLSGTS*TVECWN
Trigger: GTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAG...TCTTGGGGCCTGTTTCCCATGGGATTCAAGAGGGACAGCCCCAGCTTTGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp CTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGCGCAGGGGATGGAGTCTTTCTaGGGATGCCCCACGTCTGTG +
Preference number: 4 (lower is better)
Translates to: LERMASLPQLLQISTQAQGMESF*GCPTSV
Trigger: CACAGACGTGGGGCATCCCCAGAAAGACTCCATCCC...CTGCGCCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp GGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCGTTGCACACCTTCTCTaGTCCACACCGGGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: GPWNAGTHGFSAATSPNFVAHLL*STPGAL
Trigger: GAGGGCACCCGGTGTGGACCAGAGAAGGTGTGCAAC...GAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485491.6
CDS-3UTR TCA 90 bp CCTGAACACAGCGGGAGACCAGCGGCCACCTGGAGACACGTACACACACACGCAGGACCACACGGAAGTTaGGTTTCTGATATAGCTTGT +
Preference number: 4 (lower is better)
Translates to: PEHSGRPAATWRHVHTHAGPHGS*VSDIAC
Trigger: ACAAGCTATATCAGAAACTCAACTTCCGTGTGGTCC...TGCGTGTGTGTGTACGTGTCTCCAGGTGGCCGCTGGTCTCCCGCTGTGTTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR TCA 90 bp GGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGTGCCATCCTCTGTGGTaGGCGCGTGGCACACATCCA +
Preference number: 4 (lower is better)
Translates to: GMLERMASLPQLLQISTQCHPLW*ARGTHP
Trigger: TGGATGTGTGCCACGCGCTCACCACAGAGGATGGCA...CTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR TCA 90 bp GGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCTGGGGCTGTCCCTCTTaGATCCCATGGGAAACAGGC +
Preference number: 4 (lower is better)
Translates to: GPWNAGTHGFSAATSPNFWGCPS*IPWETG
Trigger: GCCTGTTTCCCATGGGATTCAAGAGGGACAGCCCCA...GAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR GCA 90 bp CTGCAAAGTCAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGACTGGGCAGAGCAGTTaGTGGATCTGTAAACGTGTA +
Preference number: 4 (lower is better)
Translates to: LQSQGLGLSGTSWTVECWTGQSS*WICKRV
Trigger: TACACGTTTACAGATCCAGCAACTGCTCTGCCCAGT...CCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTGACTTTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR GCA 90 bp AATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGCGTCGGGAGCTTGGGGTaGAGTCTGCTCACTGACACC +
Preference number: 4 (lower is better)
Translates to: NAGTHGFSAATSPNFHTGVGSLG*SLLTDT
Trigger: GGTGTCAGTGAGCAGACTGCACCCCAAGCTCCCGAC...GCCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR GCA 90 bp AATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGCAGCACCCTGCTTTGGTaGCTGCCGGGTGTAGACAGG +
Preference number: 4 (lower is better)
Translates to: NAGTHGFSAATSPNFHTGSTLLW*LPGVDR
Trigger: CCTGTCTACACCCGGCAGGCACCAAAGCAGGGTGCT...GCCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485491.6
CDS-3UTR CCA 90 bp AATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGCGTAGCTCACCCTCTCTaGGTGCAGGCCCAAGTGGGA +
Preference number: 4 (lower is better)
Translates to: NAGTHGFSAATSPNFHTGVAHPL*VQAQVG
Trigger: TCCCACTTGGGCCTGCACCCAGAGAGGGTGAGCTAC...GCCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp CTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGCGCAGTCGCTCCCCAGCATCTaGAACTCTGCATTGTCCACG +
Preference number: 4 (lower is better)
Translates to: LERMASLPQLLQISTQAQSLPSI*NSALST
Trigger: CGTGGACAATGCAGAGTTCCAGATGCTGGGGAGCGA...CTGCGCCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp ACACACAAAGCTGGGGCTGTCCCTCTTGAATCCCATGGGAAACAGGCCCCAAGATCGCTCCCCAGCATCTaGAACTCTGCATTGTCCACG +
Preference number: 4 (lower is better)
Translates to: THKAGAVPLESHGKQAPRSLPSI*NSALST
Trigger: CGTGGACAATGCAGAGTTCCAGATGCTGGGGAGCGA...TCTTGGGGCCTGTTTCCCATGGGATTCAAGAGGGACAGCCCCAGCTTTGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp GGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCACGGGGTTCTTGCTGTaGTCCTGGTTCACAGCCCCT +
Preference number: 4 (lower is better)
Translates to: GPWNAGTHGFSAATSPNFTGFLL*SWFTAP
Trigger: AGGGGCTGTGAACCAGGACCACAGCAAGAACCCCGT...GAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp AATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGCGGTGCCCTCGGGCACTaGTTCATACGCAGTGCCATC +
Preference number: 4 (lower is better)
Translates to: NAGTHGFSAATSPNFHTGGALGH*FIRSAI
Trigger: GATGGCACTGCGTATGAACCAGTGCCCGAGGGCACC...GCCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp ACACACAAAGCTGGGGCTGTCCCTCTTGAATCCCATGGGAAACAGGCCCCAAGACTTGATGACCTGCTTTaGTGCCTGCCGGGTGTAGAC +
Preference number: 4 (lower is better)
Translates to: THKAGAVPLESHGKQAPRLDDLL*CLPGVD
Trigger: GTCTACACCCGGCAGGCACCAAAGCAGGTCATCAAG...TCTTGGGGCCTGTTTCCCATGGGATTCAAGAGGGACAGCCCCAGCTTTGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp ACACACAAAGCTGGGGCTGTCCCTCTTGAATCCCATGGGAAACAGGCCCCAAGATGGGGGTGCGAACGTTaGCTTGATGACCTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: THKAGAVPLESHGKQAPRWGCER*LDDLLW
Trigger: CCAAAGCAGGTCATCAAGCCAACGTTCGCACCCCCA...TCTTGGGGCCTGTTTCCCATGGGATTCAAGAGGGACAGCCCCAGCTTTGTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp CTGGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTCTTGCTTCCTCTGGATaGGGGGCTTCAGGGCAACCT +
Preference number: 4 (lower is better)
Translates to: LDRGMLERMASLPQLLQILASSG*GASGQP
Trigger: AGGTTGCCCTGAAGCCCCCCATCCAGAGGAAGCAAG...AATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp GAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGGGTGGAACAGGGGGTTaGAGCGCCCCATTGTGGTCT +
Preference number: 4 (lower is better)
Translates to: ECWNAWLLCRNFSKFPHRGGTGG*SAPLWS
Trigger: AGACCACAATGGGGCGCTCCAACCCCCTGTTCCACC...CCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp CTGGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTAACAGCACCCTGCTTTaGTGCCTGCCGGGTGTAGAC +
Preference number: 4 (lower is better)
Translates to: LDRGMLERMASLPQLLQINSTLL*CLPGVD
Trigger: GTCTACACCCGGCAGGCACCAAAGCAGGGTGCTGTT...AATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485491.6
CDS-3UTR CCA 90 bp CTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGCGCAGCTTCAGGGCAACCTTTaGGCCAACAGCACCCTGCTT +
Preference number: 4 (lower is better)
Translates to: LERMASLPQLLQISTQAQLQGNL*ANSTLL
Trigger: AAGCAGGGTGCTGTTGGCCCAAAGGTTGCCCTGAAG...CTGCGCCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485491.6
CDS-3UTR TCA 90 bp CTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGCGCAGTATAGCTTGTCCACGTaGTTCACCACCTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: LERMASLPQLLQISTQAQYSLST*FTTSST
Trigger: GGTGCTGGAGGTGGTGAATCACGTGGACAAGCTATA...CTGCGCCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR TCA 90 bp TTGGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGAGGTTACCAGACAAGATAGCTaGCTCTCCCACATAGCCCTT +
Preference number: 4 (lower is better)
Translates to: LAEGVDSRSLSGRCIPEVTRQDS*LSHIAL
Trigger: AAGGGCTATGTGGGAGAGTCAGCTATCTTGTCTGGT...AACCTCAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR GCA 90 bp CTGCAAAGTCAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATGGCTTCTCTaGCGCAACTTCTCCAAATTT +
Preference number: 4 (lower is better)
Translates to: LQSQGLGLSGTSWTVECWNAWLL*RNFSKF
Trigger: AAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTT...CCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTGACTTTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp AGTCAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCAAGCCTCTCAGGTAGATaGATTCCTGAGGTTAGAACA +
Preference number: 4 (lower is better)
Translates to: SQGLGLSGTSWTVECWNASLSGR*IPEVRT
Trigger: TGTTCTAACCTCAGGAATGCATCTACCTGAGAGGCT...TGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp GGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCGTAGACGATGATGCCTaGCAGGGTGACCAGCACAAC +
Preference number: 4 (lower is better)
Translates to: GPWNAGTHGFSAATSPNFVDDDA*QGDQHN
Trigger: GTTGTGCTGGTCACCCTGGCAGGCATCATCGTCTAC...GAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp CTGGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCACCTCGGAGCCATTaGCAGCCGTATAGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: LDRGMLERMASLPQLLQISPRSH*QPYRSL
Trigger: CAGAGACCTATACGGCTGCCAATGGCTCCGAGGTGA...AATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp GACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCTTCTTGCTGTGGTCCTaGTTCACAGCCCCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: DRGMLERMASLPQLLQISFLLWS*FTAPEL
Trigger: CAGCTCAGGGGCTGTGAACCAGGACCACAGCAAGAA...GGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp GGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGTCTGTGGTGAGCGCGTaGCACACATCCACGATGCAG +
Preference number: 4 (lower is better)
Translates to: GMLERMASLPQLLQISTQSVVSA*HTSTMQ
Trigger: CTGCATCGTGGATGTGTGCCACGCGCTCACCACAGA...CTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp AAGGAATTGGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGAATGCTGGAACGCATaGCTTCTCTGCCGCAACTTC +
Preference number: 4 (lower is better)
Translates to: KELAEGVDSRSLSGRCIPECWNA*LLCRNF
Trigger: GAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTC...AGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAATTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR TCA 90 bp AAGGAATTGGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTACCAGACAAGATAGCTaGCTCTCCCACATAGCCCTT +
Preference number: 4 (lower is better)
Translates to: KELAEGVDSRSLSGRCIPTRQDS*LSHIAL
Trigger: AAGGGCTATGTGGGAGAGTCAGCTATCTTGTCTGGT...AGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAATTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR GCA 90 bp GGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGTGTACCGGCTGGCCTTaGAGCCTGGTAGGATGTCAT +
Preference number: 4 (lower is better)
Translates to: GMLERMASLPQLLQISTQCTGWP*SLVGCH
Trigger: ATGACATCCTACCAGGCTGCAAGGCCAGCCGGTACA...CTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp TTGGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGAGGTTACTGGGCAGAGCAGTTaGTGGATCTGTAAACGTGTA +
Preference number: 4 (lower is better)
Translates to: LAEGVDSRSLSGRCIPEVTGQSS*WICKRV
Trigger: TACACGTTTACAGATCCAGCAACTGCTCTGCCCAGT...AACCTCAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR GCA 90 bp GGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGAGCTGGACCGTGGAATaGTGGAACGCATGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: GMLERMASLPQLLQISTQSWTVE*WNAWLL
Trigger: GAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCT...CTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp GCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGCGCAGGTGCCCCAGCCTCTCAGGTAGATaGATTCCTGAGGTTAGAACA +
Preference number: 4 (lower is better)
Translates to: AWLLCRNFSKFPHRRRCPSLSGR*IPEVRT
Trigger: TGTTCTAACCTCAGGAATGCATCTACCTGAGAGGCT...GGGGCACCTGCGCCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp CGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACATCACCTCGGAGCCATTaGCAGCCGTATAGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: RGMLERMASLPQLLQISTSPRSH*QPYRSL
Trigger: CAGAGACCTATACGGCTGCCAATGGCTCCGAGGTGA...TGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CCA 90 bp TTCCTAAGCTTAAACACACACAAAGCTGGGGCTGTCCCTCTTGAATCCCATGGGTTCACCTTGCACTCCTaGCAGCAGGTACCGTGCGCA +
Preference number: 4 (lower is better)
Translates to: FLSLNTHKAGAVPLESHGFTLHS*QQVPCA
Trigger: TGCGCACGGTACCTGCTGCCAGGAGTGCAAGGTGAA...CCCATGGGATTCAAGAGGGACAGCCCCAGCTTTGTGTGTGTTTAAGCTTAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp AATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGCAACCTGGTCCTGGGATaGAGTCTTTCTGGGGATGCC +
Preference number: 4 (lower is better)
Translates to: NAGTHGFSAATSPNFHTGNLVLG*SLSGDA
Trigger: GGCATCCCCAGAAAGACTCCATCCCAGGACCAGGTT...GCCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR TCA 90 bp CGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACATATAGCTTGTCCACGTaGTTCACCACCTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: RGMLERMASLPQLLQISTYSLST*FTTSST
Trigger: GGTGCTGGAGGTGGTGAATCACGTGGACAAGCTATA...TGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR TCA 90 bp CTGGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTACGTGGAACCTGTCCTaGCTATTCCAAATCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LDRGMLERMASLPQLLQITWNLS*LFQISR
Trigger: CCTGGAGATTTGGAATAGTCAGGACAGGTTCCACGT...AATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp GGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGACTCCTGCTTGTGGTTaGACACCTTCTCTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: GMLERMASLPQLLQISTQTPACG*TPSLVH
Trigger: GTGGACCAGAGAAGGTGTGCAACCACAAGCAGGAGT...CTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485491.6
CDS-3UTR CCA 90 bp TTCCTAAGCTTAAACACACACAAAGCTGGGGCTGTCCCTCTTGAATCCCATGGGCTGTTCTTCCGCAGGTaGAGGGTGAAGTTGTGCCCT +
Preference number: 4 (lower is better)
Translates to: FLSLNTHKAGAVPLESHGLFFRR*RVKLCP
Trigger: AGGGCACAACTTCACCCTCCACCTGCGGAAGAACAG...CCCATGGGATTCAAGAGGGACAGCCCCAGCTTTGTGTGTGTTTAAGCTTAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp GAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGAGGTTAGAACAGGGCAGAGCAGTTGCTaGATCTGTAAACGTGTAAGT +
Preference number: 4 (lower is better)
Translates to: EGVDSRSLSGRCIPEVRTGQSSC*ICKRVS
Trigger: ACTTACACGTTTACAGATCCAGCAACTGCTCTGCCC...TGTTCTAACCTCAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CCA 90 bp AATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGCGAATGCTGGAACGCATaGCTTCTCTGCCGCAACTTC +
Preference number: 4 (lower is better)
Translates to: NAGTHGFSAATSPNFHTGECWNA*LLCRNF
Trigger: GAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTC...GCCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR TCA 90 bp GGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGACGTGGAACCTGTCCTaGCTATTCCAAATCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GMLERMASLPQLLQISTQTWNLS*LFQISR
Trigger: CCTGGAGATTTGGAATAGTCAGGACAGGTTCCACGT...CTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp GACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCCAGCATCTGGAACTCTaGATTGTCCACGACCACATA +
Preference number: 4 (lower is better)
Translates to: DRGMLERMASLPQLLQISQHLEL*IVHDHI
Trigger: TATGTGGTCGTGGACAATGCAGAGTTCCAGATGCTG...GGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR TCA 90 bp GGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCGGACCACACGGAAGTTaGGTTTCTGATATAGCTTGT +
Preference number: 4 (lower is better)
Translates to: GPWNAGTHGFSAATSPNFGPHGS*VSDIAC
Trigger: ACAAGCTATATCAGAAACTCAACTTCCGTGTGGTCC...GAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp GAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGCAGCATCTGGAACTCTaGATTGTCCACGACCACATA +
Preference number: 4 (lower is better)
Translates to: ECWNAWLLCRNFSKFPHRQHLEL*IVHDHI
Trigger: TATGTGGTCGTGGACAATGCAGAGTTCCAGATGCTG...CCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR TCA 90 bp AATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGCGGACCACACGGAAGTTaGGTTTCTGATATAGCTTGT +
Preference number: 4 (lower is better)
Translates to: NAGTHGFSAATSPNFHTGGPHGS*VSDIAC
Trigger: ACAAGCTATATCAGAAACTCAACTTCCGTGTGGTCC...GCCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp GAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGAACGCATGGCTTCTCTaGCGCAACTTCTCCAAATTT +
Preference number: 4 (lower is better)
Translates to: ECWNAWLLCRNFSKFPHRNAWLL*RNFSKF
Trigger: AAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTT...CCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR GCA 90 bp GGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGAACGCATGGCTTCTCTaGCGCAACTTCTCCAAATTT +
Preference number: 4 (lower is better)
Translates to: GMLERMASLPQLLQISTQNAWLL*RNFSKF
Trigger: AAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTT...CTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS GCA 90 bp AGCGGTTCCGGCAGTCCTGGGGCGACGGCAAAGGCCTTGGCAGGCTaGACTGGGGCCGGGCTGGGCTCCAGGGCGGACCTGGCCGCCTCC +
Preference number: 5 (lower is better)
Translates to: SGSGSPGATAKALAG*TGAGLGSRADLAAS
Trigger: GGAGGCGGCCAGGTCCGCCCTGGAGCCCAGCCCGGCCCCAGTGCAGCCTGCCAAGGCCTTTGCCGTCGCCCCAGGACTGCCGGAACCGCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468964.1
CDS CCA 90 bp CAGGCAGCATCATCGCGCCCAGCAGCCAGAGCCCGAGGCCGCGCATaGCCGGGTCGGGGAGCAGAGGCGGAGGTGACAGCCCCGCGGGAC +
Preference number: 5 (lower is better)
Translates to: QAASSRPAARARGRA*PGRGAEAEVTAPRD
Trigger: GTCCCGCGGGGCTGTCACCTCCGCCTCTGCTCCCCGACCCGGCCATGCGCGGCCTCGGGCTCTGGCTGCTGGGCGCGATGATGCTGCCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000445355.8
ENST00000485491.6
ENST00000559180.1
ENST00000560135.5
CDS CCA 90 bp GTTGCAGCAGCGGTTCCGGCAGTCCTGGGGCGACGGCAAAGGCCTTaGCAGGCTGCACTGGGGCCGGGCTGGGCTCCAGGGCGGACCTGG +
Preference number: 5 (lower is better)
Translates to: VAAAVPAVLGRRQRP*QAALGPGWAPGRTW
Trigger: CCAGGTCCGCCCTGGAGCCCAGCCCGGCCCCAGTGCAGCCTGCCAAGGCCTTTGCCGTCGCCCCAGGACTGCCGGAACCGCTGCTGCAAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468964.1
CDS CCA 90 bp TCGCTGACCCCGCAGGTCCCGGCCGTCTGCAGCAGGTGCTCAGCCTaGTACACGGCGTGCCGTCCGCCCTCGCCACCTTCATCCAGGGGC +
Preference number: 5 (lower is better)
Translates to: SLTPQVPAVCSRCSA*YTACRPPSPPSSRG
Trigger: GCCCCTGGATGAAGGTGGCGAGGGCGGACGGCACGCCGTGTACCAGGCTGAGCACCTGCTGCAGACGGCCGGGACCTGCGGGGTCAGCGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000463298.5
ENST00000485491.6
ENST00000486609.1
ENST00000537099.5
ENST00000559180.1
ENST00000560135.5
CDS GCA 90 bp AGGCTGTCGTCGCTGACCCCGCAGGTCCCGGCCGTCTGCAGCAGGTaGTCAGCCTGGTACACGGCGTGCCGTCCGCCCTCGCCACCTTCA +
Preference number: 5 (lower is better)
Translates to: RLSSLTPQVPAVCSR*SAWYTACRPPSPPS
Trigger: TGAAGGTGGCGAGGGCGGACGGCACGCCGTGTACCAGGCTGAGCACCTGCTGCAGACGGCCGGGACCTGCGGGGTCAGCGACGACAGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000463298.5
ENST00000485491.6
ENST00000486609.1
ENST00000537099.5
ENST00000559180.1
ENST00000560135.5
CDS TCA 90 bp GCTCCACAAACAGGTTCCCACACACGGGGCCGCCCACCAGGTGGCTaGGGTCAGGGGCGTTGGCGAGGCACACCGACTGCGGCCGCTCCA +
Preference number: 5 (lower is better)
Translates to: APQTGSHTRGRPPGG*GQGRWRGTPTAAAP
Trigger: TGGAGCGGCCGCAGTCGGTGTGCCTCGCCAACGCCCCTGACCTCAGCCACCTGGTGGGCGGCCCCGTGTGTGGGAACCTGTTTGTGGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS GCA 90 bp CAGGTCCCGGCCGTCTGCAGCAGGTGCTCAGCCTGGTACACGGCGTaGCGTCCGCCCTCGCCACCTTCATCCAGGGGCTCGATCAGGTGC +
Preference number: 5 (lower is better)
Translates to: QVPAVCSRCSAWYTA*RPPSPPSSRGSIRC
Trigger: GCACCTGATCGAGCCCCTGGATGAAGGTGGCGAGGGCGGACGGCACGCCGTGTACCAGGCTGAGCACCTGCTGCAGACGGCCGGGACCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000463298.5
ENST00000485491.6
ENST00000486609.1
ENST00000537099.5
ENST00000559180.1
ENST00000560135.5
CDS GCA 90 bp GTGTGGGACAGGCCCCGTTGTAGCAGTAGCCCCCGGAGCAGGGCGTaGCGTTCTCCTGGAAGGCGTCTTCCGGGCACTCAGGGTGCCGGC +
Preference number: 5 (lower is better)
Translates to: VWDRPRCSSSPRSRA*RSPGRRLPGTQGAG
Trigger: GCCGGCACCCTGAGTGCCCGGAAGACGCCTTCCAGGAGAACGGCACGCCCTGCTCCGGGGGCTACTGCTACAACGGGGCCTGTCCCACAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000468964.1
ENST00000485491.6
CDS TCA 90 bp CCGCCACACCCACCTGAGGCCGGCACAGGTGCTGAGGCTGGCGGCTaGGTCCGGGTACCCCTCTACGTGGCCCTGGTAGAAGCAGTGGTC +
Preference number: 5 (lower is better)
Translates to: PPHPPEAGTGAEAGG*VRVPLYVALVEAVV
Trigger: GACCACTGCTTCTACCAGGGCCACGTAGAGGGGTACCCGGACTCAGCCGCCAGCCTCAGCACCTGTGCCGGCCTCAGGTGGGTGTGGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463298.5
CDS GCA 90 bp AAGACCCCAGGAGCGCCCCCAGGCATGGCCGGTGGGCCTGTGTCCTaGAGCACCCACACACAGTGCTCAGAGACGCTGTGGGTGCCAGCG +
Preference number: 5 (lower is better)
Translates to: KTPGAPPGMAGGPVS*STHTQCSETLWVPA
Trigger: CGCTGGCACCCACAGCGTCTCTGAGCACTGTGTGTGGGTGCTGCAGGACACAGGCCCACCGGCCATGCCTGGGGGCGCTCCTGGGGTCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537099.5
CDS GCA 90 bp CGGACTCGGGGGCCTGGCAGACGCCACGGCAACACGACCTCATACTaGTCCATGAGGGCCCAGGGCCGGCTGGGGGCAATCGCAGATAGC +
Preference number: 5 (lower is better)
Translates to: RTRGPGRRHGNTTSY*SMRAQGRLGAIADS
Trigger: GCTATCTGCGATTGCCCCCAGCCGGCCCTGGGCCCTCATGGAGCAGTATGAGGTCGTGTTGCCGTGGCGTCTGCCAGGCCCCCGAGTCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000537099.5
CDS CCA 90 bp CGCCCTTGGCCGGCACGCGGCTGGCAGCCTGGTGGAACAGGGGGTTaGAGCGCCCCATTGTGGTCTTGGGAGCCACGTTCCTGCTCAGGA +
Preference number: 5 (lower is better)
Translates to: RPWPARGWQPGGTGG*SAPLWSWEPRSCSG
Trigger: TCCTGAGCAGGAACGTGGCTCCCAAGACCACAATGGGGCGCTCCAACCCCCTGTTCCACCAGGCTGCCAGCCGCGTGCCGGCCAAGGGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000445355.8
ENST00000485491.6
CDS CCA 90 bp CTGCCCTCCCAAGTGGGAGGGCAGAGCTCGGCGGACTCGGGGGCCTaGCAGACGCCACGGCAACACGACCTCATACTGCTCCATGAGGGC +
Preference number: 5 (lower is better)
Translates to: LPSQVGGQSSADSGA*QTPRQHDLILLHEG
Trigger: GCCCTCATGGAGCAGTATGAGGTCGTGTTGCCGTGGCGTCTGCCAGGCCCCCGAGTCCGCCGAGCTCTGCCCTCCCACTTGGGAGGGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486609.1
CDS TCA 90 bp GGTCTGACCCCACCTGAGGCCGGCACAGGTGCTGAGGCTGGCGGCTaGGTCCGGGTACCCCTCTACGTGGCCCTGGTAGAAGCAGTGGTC +
Preference number: 5 (lower is better)
Translates to: GLTPPEAGTGAEAGG*VRVPLYVALVEAVV
Trigger: GACCACTGCTTCTACCAGGGCCACGTAGAGGGGTACCCGGACTCAGCCGCCAGCCTCAGCACCTGTGCCGGCCTCAGGTGGGGTCAGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485491.6
ENST00000559180.1
CDS GCA 90 bp CCCACCTCCCGCCAGGGGCTCTGGCACCTCTGCAGCCAGGACCGCTaGCCACCTTGTCCACGTGATTCACCACCTCCAGCACCCGATGAC +
Preference number: 5 (lower is better)
Translates to: PTSRQGLWHLCSQDR*PPCPRDSPPPAPDD
Trigger: GTCATCGGGTGCTGGAGGTGGTGAATCACGTGGACAAGGTGGGCAGCGGTCCTGGCTGCAGAGGTGCCAGAGCCCCTGGCGGGAGGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463298.5
CDS-3UTR CAA 90 bp GTCCACGTGATTCACCACCTCCAGCACCCGATGACGCACGGCTGCTTCGCTCCCGTGCCGCCGTGTCCGTaGCCGTGCCTGCCAGGTCAG +
Preference number: 5 (lower is better)
Translates to: VHVIHHLQHPMTHGCFAPVPPCP*PCLPGQ
Trigger: CTGACCTGGCAGGCACGGCAACGGACACGGCGGCAC...GGGAGCGAAGCAGCCGTGCGTCATCGGGTGCTGGAGGTGGTGAATCACGTGGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560135.5
CDS-3UTR CAA 90 bp AGAGTCCCCGGGCCGAGGCCTGAAGACGGCTGCCGTCCGGGGTCCCAGGAGGCTGTGATGAGCTGTACGTaGTCATGCAGGTGCCGCCGT +
Preference number: 5 (lower is better)
Translates to: RVPGPRPEDGCRPGSQEAVMSCT*SCRCRR
Trigger: ACGGCGGCACCTGCATGACAACGTACAGCTCATCAC...AGCCTCCTGGGACCCCGGACGGCAGCCGTCTTCAGGCCTCGGCCCGGGGACTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560135.5
CDS GCA 90 bp CCAGGCATGGCCGGTGGGCCTGTGTCCTGCAGCACCCACACACAGTaGTCAGAGACGCTGTGGGTGCCAGCGGGTGCCAGTGACTCCACA +
Preference number: 5 (lower is better)
Translates to: PGMAGGPVSCSTHTQ*SETLWVPAGASDST
Trigger: TGTGGAGTCACTGGCACCCGCTGGCACCCACAGCGTCTCTGAGCACTGTGTGTGGGTGCTGCAGGACACAGGCCCACCGGCCATGCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537099.5
CDS GCA 90 bp GGCCACGCCCACGGGGTTCTTGCTGTGGTCCTGCAGGAGGGTCTGTaGTCTCAGGAACCATGTGGCCAACTCCCCACGCCTGCCACCCTC +
Preference number: 5 (lower is better)
Translates to: GHAHGVLAVVLQEGL*SQEPCGQLPTPATL
Trigger: GAGGGTGGCAGGCGTGGGGAGTTGGCCACATGGTTCCTGAGAGCACAGACCCTCCTGCAGGACCACAGCAAGAACCCCGTGGGCGTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537099.5
CDS CCA 90 bp AGCAGTGGTCCTGCCCGCGAGGCTGCTCCGTCACCTCGGAGCCATTaGCAGCCGTATAGGTCTCTGTGTAGCCGGAGCCCAGCAGGTCCC +
Preference number: 5 (lower is better)
Translates to: SSGPAREAAPSPRSH*QPYRSLCSRSPAGP
Trigger: GGGACCTGCTGGGCTCCGGCTACACAGAGACCTATACGGCTGCCAATGGCTCCGAGGTGACGGAGCAGCCTCGCGGGCAGGACCACTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000463298.5
ENST00000485491.6
ENST00000486609.1
ENST00000537099.5
ENST00000559180.1
ENST00000560135.5
CDS CCA 90 bp CCAATGCTGCCCGCCATGATGCAGCGGCCGGCCTCGAAGCGTTCCTaGCAGCGGCAGCCCTGGACGTTCTCATCATGGTCCATGCCCAGG +
Preference number: 5 (lower is better)
Translates to: PMLPAMMQRPASKRS*QRQPWTFSSWSMPR
Trigger: CCTGGGCATGGACCATGATGAGAACGTCCAGGGCTGCCGCTGCCAGGAACGCTTCGAGGCCGGCCGCTGCATCATGGCGGGCAGCATTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
ENST00000561175.1
CDS CCA 90 bp GCCAACAGCACCCTGCTTTGGTGCCTGCCGGGTGTAGACAGGAACTaGGAAGGGTGGGCTGGACACAGTGACCGGAGGAGCAGGGGGCGG +
Preference number: 5 (lower is better)
Translates to: ANSTLLWCLPGVDRN*EGWAGHSDRRSRGR
Trigger: CCGCCCCCTGCTCCTCCGGTCACTGTGTCCAGCCCACCCTTCCCAGTTCCTGTCTACACCCGGCAGGCACCAAAGCAGGGTGCTGTTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485491.6
CDS-3UTR CAA 90 bp TGGCCTCCTGAACACAGCGGGAGACCAGCGGCCACCTGGAGACACGTACACACAGTGCCGCCGTGTCCGTaGCCGTGCCTGCCAGGTCAG +
Preference number: 5 (lower is better)
Translates to: WPPEHSGRPAATWRHVHTVPPCP*PCLPGQ
Trigger: CTGACCTGGCAGGCACGGCAACGGACACGGCGGCAC...TGTGTGTACGTGTCTCCAGGTGGCCGCTGGTCTCCCGCTGTGTTCAGGAGGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CAA 90 bp CTGAGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCGTGCCGCCGTGTCCGTaGCCGTGCCTGCCAGGTCAG +
Preference number: 5 (lower is better)
Translates to: LSGTSWTVECWNAWLLCRVPPCP*PCLPGQ
Trigger: CTGACCTGGCAGGCACGGCAACGGACACGGCGGCAC...GCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS TCA 90 bp CTGGAAGAAACCCCTGAGGCCGGCACAGGTGCTGAGGCTGGCGGCTaGGTCCGGGTACCCCTCTACGTGGCCCTGGTAGAAGCAGTGGTC +
Preference number: 5 (lower is better)
Translates to: LEETPEAGTGAEAGG*VRVPLYVALVEAVV
Trigger: GACCACTGCTTCTACCAGGGCCACGTAGAGGGGTACCCGGACTCAGCCGCCAGCCTCAGCACCTGTGCCGGCCTCAGGGGTTTCTTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000486609.1
ENST00000537099.5
ENST00000560135.5
CDS TCA 90 bp GGGTGCCCTCGGGCACTGGTTCATACGCAGTGCCATCCTCTGTGGTaGGCGCGTGGCACACATCCACGATGCAGATGGCACGCCCCAGGG +
Preference number: 5 (lower is better)
Translates to: GCPRALVHTQCHPLW*ARGTHPRCRWHAPG
Trigger: CCCTGGGGCGTGCCATCTGCATCGTGGATGTGTGCCACGCGCTCACCACAGAGGATGGCACTGCGTATGAACCAGTGCCCGAGGGCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS GCA 90 bp GGAGTGGGAGCCGGGTGTGCTGTGGGCTTCAGAGTGGCCTGGTCCTaGCCCGAAGGACCAGAGGCTCCAGTTTGTTGCCTACAGCTCCCC +
Preference number: 5 (lower is better)
Translates to: GVGAGCAVGFRVAWS*PEGPEAPVCCLQLP
Trigger: GGGGAGCTGTAGGCAACAAACTGGAGCCTCTGGTCCTTCGGGGCAGGACCAGGCCACTCTGAAGCCCACAGCACACCCGGCTCCCACTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463298.5
CDS CCA 90 bp GACCTGCTTTGGTGCCTGCCGGGTGTAGACAGGAACTGGGAAGGGTaGGCTGGACACAGTGACCGGAGGAGCAGGGGGCGGCCTCTTCAG +
Preference number: 5 (lower is better)
Translates to: DLLWCLPGVDRNWEG*AGHSDRRSRGRPLQ
Trigger: CTGAAGAGGCCGCCCCCTGCTCCTCCGGTCACTGTGTCCAGCCCACCCTTCCCAGTTCCTGTCTACACCCGGCAGGCACCAAAGCAGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS CCA 90 bp CCCCCTAGGGTGCTGTGGGAGCTCCGGCTCCTTGCTTCCTCTGGATaGGGGGCTTCAGGGCAACCTTTGGGCCAACAGCACCCTCAGCTG +
Preference number: 5 (lower is better)
Translates to: PPRVLWELRLLASSG*GASGQPLGQQHPQL
Trigger: CAGCTGAGGGTGCTGTTGGCCCAAAGGTTGCCCTGAAGCCCCCCATCCAGAGGAAGCAAGGAGCCGGAGCTCCCACAGCACCCTAGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000559018.1
CDS CCA 90 bp ACCCTGCTTTGGTGCCTGCCGGGTGTAGACAGGAACTGGGAAGGGTaGGCTGGACACAGTGACCGGAGGAGCAGGGGGCGGCCTCTTCAG +
Preference number: 5 (lower is better)
Translates to: TLLWCLPGVDRNWEG*AGHSDRRSRGRPLQ
Trigger: CTGAAGAGGCCGCCCCCTGCTCCTCCGGTCACTGTGTCCAGCCCACCCTTCCCAGTTCCTGTCTACACCCGGCAGGCACCAAAGCAGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485491.6
CDS-3UTR CAA 90 bp CAGCGGGAGACCAGCGGCCACCTGGAGACACGTACACACACACGCACCCGCAAGAGGTGGAGGGTGAAGTaGTGCCCTGTGGCCCCAAGG +
Preference number: 5 (lower is better)
Translates to: QRETSGHLETRTHTRTRKRWRVK*CPVAPR
Trigger: CCTTGGGGCCACAGGGCACAACTTCACCCTCCACCT...CTTGCGGGTGCGTGTGTGTGTACGTGTCTCCAGGTGGCCGCTGGTCTCCCGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CAA 90 bp TGCAGACAGCTGGGGCTACACGTGGCCAAGGCGGGGAGAAGGAATTGGCTGAGGCTGAGGTCAGGGGCGTaGGCGAGGCACACCGACTGC +
Preference number: 5 (lower is better)
Translates to: CRQLGLHVAKAGRRNWLRLRSGA*ARHTDC
Trigger: GCAGTCGGTGTGCCTCGCCAACGCCCCTGACCTCAG...CCTCAGCCAATTCCTTCTCCCCGCCTTGGCCACGTGTAGCCCCAGCTGTCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CAA 90 bp GGCTGGGAGGGGCTGTATATGTGGCCTCCTGAACACAGCGGGAGACCAGCGGCCTGGTGGAACAGGGGGTaGGAGCGCCCCATTGTGGTC +
Preference number: 5 (lower is better)
Translates to: GWEGLYMWPPEHSGRPAAWWNRG*ERPIVV
Trigger: GACCACAATGGGGCGCTCCAACCCCCTGTTCCACCA...GGCCGCTGGTCTCCCGCTGTGTTCAGGAGGCCACATATACAGCCCCTCCCAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000445355.8
CDS GCA 90 bp GCGTGGCACACATCCACGATGCAGATGGCACGCCCCAGGGGCTGCTaGCCACCCTTGCACTGCAGAACGCCACACATGTCAGCCCTGTAC +
Preference number: 5 (lower is better)
Translates to: AWHTSTMQMARPRGC*PPLHCRTPHMSALY
Trigger: GTACAGGGCTGACATGTGTGGCGTTCTGCAGTGCAAGGGTGGGCAGCAGCCCCTGGGGCGTGCCATCTGCATCGTGGATGTGTGCCACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS CCA 90 bp TGGCTTGATGACCTGCTTTGGTGCCTGCCGGGTGTAGACAGGAACTaGGAAGGGTGGGCTGGACACAGTGACCGGAGGAGCAGGGGGCGG +
Preference number: 5 (lower is better)
Translates to: WLDDLLWCLPGVDRN*EGWAGHSDRRSRGR
Trigger: CCGCCCCCTGCTCCTCCGGTCACTGTGTCCAGCCCACCCTTCCCAGTTCCTGTCTACACCCGGCAGGCACCAAAGCAGGTCATCAAGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS CCA 90 bp GGTGCCGGCCGTCACAGAACTCCTCGAGGTCACACATGTCCTTCTTaGGACGGCACAGCTCACCAGCCGGCTTGCACTCCTGGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: GAGRHRTPRGHTCPS*DGTAHQPACTPGSR
Trigger: CCTGCTGCCAGGAGTGCAAGCCGGCTGGTGAGCTGTGCCGTCCCAAGAAGGACATGTGTGACCTCGAGGAGTTCTGTGACGGCCGGCACC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468964.1
CDS CCA 90 bp CCCCCTAGGGTGCTGTGGGAGCTCCGGCTCCTTGCTTCCTCTGGATaGGGGGCTTCAGGGCAACCTTTGGGCCAACAGCACCCTGCTTTG +
Preference number: 5 (lower is better)
Translates to: PPRVLWELRLLASSG*GASGQPLGQQHPAL
Trigger: CAAAGCAGGGTGCTGTTGGCCCAAAGGTTGCCCTGAAGCCCCCCATCCAGAGGAAGCAAGGAGCCGGAGCTCCCACAGCACCCTAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000485491.6
CDS-3UTR CAA 90 bp CACACACGCACCCGCAAGCACACAGCTCATCCCAGCCTGGTGCCTGCAGACAGCTGGCAGGTGGTAGAGTaGCAGCAGCGGTTCCGGCAG +
Preference number: 5 (lower is better)
Translates to: HTRTRKHTAHPSLVPADSWQVVE*QQRFRQ
Trigger: CTGCCGGAACCGCTGCTGCAACTCTACCACCTGCCA...GCTGTCTGCAGGCACCAGGCTGGGATGAGCTGTGTGCTTGCGGGTGCGTGTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS GCA 90 bp CCCGTGATGAGCTGTACGTTGTCATGCAGGTGCCGCCGTGTCCGTTaGCGTGCCTGCCAGGTCAGGAGGTTCTCCAGTGTGACACTGGGG +
Preference number: 5 (lower is better)
Translates to: PVMSCTLSCRCRRVR*RACQVRRFSSVTLG
Trigger: CCCCAGTGTCACACTGGAGAACCTCCTGACCTGGCAGGCACGGCAACGGACACGGCGGCACCTGCATGACAACGTACAGCTCATCACGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
ENST00000537099.5
ENST00000561175.1
CDS GCA 90 bp CCGGTGAAGTCGACACCCGTGATGAGCTGTACGTTGTCATGCAGGTaGCGCCGTGTCCGTTGCCGTGCCTGCCAGGTCAGGAGGTTCTCC +
Preference number: 5 (lower is better)
Translates to: PVKSTPVMSCTLSCR*RRVRCRACQVRRFS
Trigger: GGAGAACCTCCTGACCTGGCAGGCACGGCAACGGACACGGCGGCACCTGCATGACAACGTACAGCTCATCACGGGTGTCGACTTCACCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
ENST00000537099.5
ENST00000561175.1
CDS GCA 90 bp CAGGGCGTGCCGTTCTCCTGGAAGGCGTCTTCCGGGCACTCAGGGTaGCGGCCGTCACAGAACTCCTCGAGGTCACACATGTCCTTCTTG +
Preference number: 5 (lower is better)
Translates to: QGVPFSWKASSGHSG*RPSQNSSRSHMSFL
Trigger: CAAGAAGGACATGTGTGACCTCGAGGAGTTCTGTGACGGCCGGCACCCTGAGTGCCCGGAAGACGCCTTCCAGGAGAACGGCACGCCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000468964.1
ENST00000485491.6
CDS GCA 90 bp GGCTTTGCGGTAGACGATGATGCCTGCCAGGGTGACCAGCACAACTaGCAGGAGCACCAGAACCACCACCACGAAGACGGGGAGGCTCCC +
Preference number: 5 (lower is better)
Translates to: GFAVDDDACQGDQHN*QEHQNHHHEDGEAP
Trigger: GGGAGCCTCCCCGTCTTCGTGGTGGTGGTTCTGGTGCTCCTGGCAGTTGTGCTGGTCACCCTGGCAGGCATCATCGTCTACCGCAAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445355.8
ENST00000485491.6
CDS GCA 90 bp CCTGCTCAGGATGCGGCTCCGGGCTTTGCGGTAGACGATGATGCCTaGCAGGGTGACCAGCACAACTGCCAGGAGCACCAGAACCACCAC +
Preference number: 5 (lower is better)
Translates to: PAQDAAPGFAVDDDA*QGDQHNCQEHQNHH
Trigger: GTGGTGGTTCTGGTGCTCCTGGCAGTTGTGCTGGTCACCCTGGCAGGCATCATCGTCTACCGCAAAGCCCGGAGCCGCATCCTGAGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445355.8
ENST00000485491.6
CDS GCA 90 bp CTGTGTCCTGCAGCACCCACACACAGTGCTCAGAGACGCTGTGGGTaGCAGCGGGTGCCAGTGACTCCACAGGTCTCCAGGCTGTCTCAG +
Preference number: 5 (lower is better)
Translates to: LCPAAPTHSAQRRCG*QRVPVTPQVSRLSQ
Trigger: CTGAGACAGCCTGGAGACCTGTGGAGTCACTGGCACCCGCTGGCACCCACAGCGTCTCTGAGCACTGTGTGTGGGTGCTGCAGGACACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537099.5
CDS GCA 90 bp TGGGCCATGGTACAGGCCACGCCCACGGGGTTCTTGCTGTGGTCCTaGAGGAGGGTCTGTGCTCTCAGGAACCATGTGGCCAACTCCCCA +
Preference number: 5 (lower is better)
Translates to: WAMVQATPTGFLLWS*RRVCALRNHVANSP
Trigger: TGGGGAGTTGGCCACATGGTTCCTGAGAGCACAGACCCTCCTGCAGGACCACAGCAAGAACCCCGTGGGCGTGGCCTGTACCATGGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537099.5
CDS-3UTR CAA 90 bp AGGAATTGGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGGTGCCGCCGTGTCCGTaGCCGTGCCTGCCAGGTCAG +
Preference number: 5 (lower is better)
Translates to: RNWLRAWTAGASQVDAFLVPPCP*PCLPGQ
Trigger: CTGACCTGGCAGGCACGGCAACGGACACGGCGGCAC...CAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAATTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CAA 90 bp TGGCCTCCTGAACACAGCGGGAGACCAGCGGCCACCTGGAGACACGTACACACATGGCAGGTGGTAGAGTaGCAGCAGCGGTTCCGGCAG +
Preference number: 5 (lower is better)
Translates to: WPPEHSGRPAATWRHVHTWQVVE*QQRFRQ
Trigger: CTGCCGGAACCGCTGCTGCAACTCTACCACCTGCCA...TGTGTGTACGTGTCTCCAGGTGGCCGCTGGTCTCCCGCTGTGTTCAGGAGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CAA 90 bp CCTGAACACAGCGGGAGACCAGCGGCCACCTGGAGACACGTACACACACACGCACCAGCCGGCTTCACCTaGCACTCCTGGCAGCAGGTA +
Preference number: 5 (lower is better)
Translates to: PEHSGRPAATWRHVHTHAPAGFT*HSWQQV
Trigger: TACCTGCTGCCAGGAGTGCAAGGTGAAGCCGGCTGG...TGCGTGTGTGTGTACGTGTCTCCAGGTGGCCGCTGGTCTCCCGCTGTGTTCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CAA 90 bp AGGAATTGGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGTCAGCTGGACCAGGGTaGGCCGCACCAGCCCCGGGT +
Preference number: 5 (lower is better)
Translates to: RNWLRAWTAGASQVDAFLSAGPG*AAPAPG
Trigger: ACCCGGGGCTGGTGCGGCCAACCCTGGTCCAGCTGA...CAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAATTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CAA 90 bp GGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCGGTTGGAGCGCCCCATaGTGGTCTTGGGAGCCACGT +
Preference number: 5 (lower is better)
Translates to: GLSGTSWTVECWNAWLLCGWSAP*WSWEPR
Trigger: ACGTGGCTCCCAAGACCACAATGGGGCGCTCCAACC...GCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CAA 90 bp AATTGGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGAGGCTGAGGTCAGGGGCGTaGGCGAGGCACACCGACTGC +
Preference number: 5 (lower is better)
Translates to: NWLRAWTAGASQVDAFLRLRSGA*ARHTDC
Trigger: GCAGTCGGTGTGCCTCGCCAACGCCCCTGACCTCAG...CCTCAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CAA 90 bp AATCCCATGGGAAACAGGCCCCAAGATCAGGGGACCTGGAGTCGGGAGCTTGGGCCAGCCGGCTTCACCTaGCACTCCTGGCAGCAGGTA +
Preference number: 5 (lower is better)
Translates to: NPMGNRPQDQGTWSRELGPAGFT*HSWQQV
Trigger: TACCTGCTGCCAGGAGTGCAAGGTGAAGCCGGCTGG...CCCAAGCTCCCGACTCCAGGTCCCCTGATCTTGGGGCCTGTTTCCCATGGGATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CAA 90 bp TGGCCTCCTGAACACAGCGGGAGACCAGCGGCCACCTGGAGACACGTACACACACTGTACCGGCTGGCCTaGCAGCCTGGTAGGATGTCA +
Preference number: 5 (lower is better)
Translates to: WPPEHSGRPAATWRHVHTLYRLA*QPGRMS
Trigger: TGACATCCTACCAGGCTGCAAGGCCAGCCGGTACAG...TGTGTGTACGTGTCTCCAGGTGGCCGCTGGTCTCCCGCTGTGTTCAGGAGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CAA 90 bp CACACACGCACCCGCAAGCACACAGCTCATCCCAGCCTGGTGCCTGCAGACAGCCACTCCTGCTTGTGGTaGCACACCCCATGGTTGTGG +
Preference number: 5 (lower is better)
Translates to: HTRTRKHTAHPSLVPADSHSCLW*HTPWLW
Trigger: CCACAACCATGGGGTGTGCAACCACAAGCAGGAGTG...GCTGTCTGCAGGCACCAGGCTGGGATGAGCTGTGTGCTTGCGGGTGCGTGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CAA 90 bp AGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGAGGTTAGAACAGTCAGCTGGACCAGGGTaGGCCGCACCAGCCCCGGGT +
Preference number: 5 (lower is better)
Translates to: RAWTAGASQVDAFLRLEQSAGPG*AAPAPG
Trigger: ACCCGGGGCTGGTGCGGCCAACCCTGGTCCAGCTGA...CTGTTCTAACCTCAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CAA 90 bp CAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATGGGCTTCAGGGCAACCTTaGGGCCAACAGCACCCTCAG +
Preference number: 5 (lower is better)
Translates to: QGLGLSGTSWTVECWNAWASGQP*GQQHPQ
Trigger: CTGAGGGTGCTGTTGGCCCAAAGGTTGCCCTGAAGC...CCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CAA 90 bp CTGAGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCGCTTCAGGGCAACCTTaGGGCCAACAGCACCCTGCT +
Preference number: 5 (lower is better)
Translates to: LSGTSWTVECWNAWLLCRASGQP*GQQHPA
Trigger: AGCAGGGTGCTGTTGGCCCAAAGGTTGCCCTGAAGC...GCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485491.6
CDS-3UTR CAA 90 bp TGGGATGGAGTCTTTCTGGGGATGCCCCACGTCTGTGCTGCCTGGAACCGGGTGGGTGCGAACGTTGGCTaGATGACCTGCTTTGGTGCC +
Preference number: 5 (lower is better)
Translates to: WDGVFLGMPHVCAAWNRVGANVG*MTCFGA
Trigger: GGCACCAAAGCAGGTCATCAAGCCAACGTTCGCACC...CACCCGGTTCCAGGCAGCACAGACGTGGGGCATCCCCAGAAAGACTCCATCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CAA 90 bp ACTGACACCCTCTCGAAGAGCACGCAGGGGAACCTGGTCCTGGGATGGAGTCTTCGCCCCATTGTGGTCTaGGGAGCCACGTTCCTGCTC +
Preference number: 5 (lower is better)
Translates to: TDTLSKSTQGNLVLGWSLRPIVV*GATFLL
Trigger: GAGCAGGAACGTGGCTCCCAAGACCACAATGGGGCG...AAGACTCCATCCCAGGACCAGGTTCCCCTGCGTGCTCTTCGAGAGGGTGTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445355.8
CDS-3UTR CAA 90 bp GAATTGGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGAGAGGTGGAGGGTGAAGTaGTGCCCTGTGGCCCCAAGG +
Preference number: 5 (lower is better)
Translates to: ELAEGVDSRSLSGRCIPERWRVK*CPVAPR
Trigger: CCTTGGGGCCACAGGGCACAACTTCACCCTCCACCT...CTCAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CAA 90 bp CTAGCTGGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAGGTGGAGGGTGAAGTaGTGCCCTGTGGCCCCAAGG +
Preference number: 5 (lower is better)
Translates to: LAGPWNAGTHGFSAATSPRWRVK*CPVAPR
Trigger: CCTTGGGGCCACAGGGCACAACTTCACCCTCCACCT...TGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CAA 90 bp TCACTGACACCCTCTCGAAGAGCACGCAGGGGAACCTGGTCCTGGGATGGAGTCGTGATGAGCTGTACGTaGTCATGCAGGTGCCGCCGT +
Preference number: 5 (lower is better)
Translates to: SLTPSRRARRGTWSWDGVVMSCT*SCRCRR
Trigger: ACGGCGGCACCTGCATGACAACGTACAGCTCATCAC...GACTCCATCCCAGGACCAGGTTCCCCTGCGTGCTCTTCGAGAGGGTGTCAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CAA 90 bp AGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCAACGTGATGAGCTGTACGTaGTCATGCAGGTGCCGCCGT +
Preference number: 5 (lower is better)
Translates to: SGTSWTVECWNAWLLCRNVMSCT*SCRCRR
Trigger: ACGGCGGCACCTGCATGACAACGTACAGCTCATCAC...GTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CAA 90 bp GAATTGGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGAGTGGCAGGTGGTAGAGTaGCAGCAGCGGTTCCGGCAG +
Preference number: 5 (lower is better)
Translates to: ELAEGVDSRSLSGRCIPEWQVVE*QQRFRQ
Trigger: CTGCCGGAACCGCTGCTGCAACTCTACCACCTGCCA...CTCAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAATTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CAA 90 bp CAGCAGCTGAGCCTGCAAAGTCAGGGTCTAGGGCTGAGCGGCACTAGCTGGACCTCACACATGTCCTTCTaGGGACGGCACAGCTCACCA +
Preference number: 5 (lower is better)
Translates to: QQLSLQSQGLGLSGTSWTSHMSF*GRHSSP
Trigger: TGGTGAGCTGTGCCGTCCCAAGAAGGACATGTGTGA...GGTCCAGCTAGTGCCGCTCAGCCCTAGACCCTGACTTTGCAGGCTCAGCTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CAA 90 bp TCACTGACACCCTCTCGAAGAGCACGCAGGGGAACCTGGTCCTGGGATGGAGTCCTGGGGCTGTCCCTCTaGAATCCCATGGGAAACAGG +
Preference number: 5 (lower is better)
Translates to: SLTPSRRARRGTWSWDGVLGLSL*NPMGNR
Trigger: CCTGTTTCCCATGGGATTCAAGAGGGACAGCCCCAG...GACTCCATCCCAGGACCAGGTTCCCCTGCGTGCTCTTCGAGAGGGTGTCAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CAA 90 bp AACCTGGTCCTGGGATGGAGTCTTTCTGGGGATGCCCCACGTCTGTGCTGCCTGCTGGGGCTGTCCCTCTaGAATCCCATGGGAAACAGG +
Preference number: 5 (lower is better)
Translates to: NLVLGWSLSGDAPRLCCLLGLSL*NPMGNR
Trigger: CCTGTTTCCCATGGGATTCAAGAGGGACAGCCCCAG...CAGGCAGCACAGACGTGGGGCATCCCCAGAAAGACTCCATCCCAGGACCAGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CAA 90 bp CTAGCTGGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCACGCCCCATTGTGGTCTaGGGAGCCACGTTCCTGCTC +
Preference number: 5 (lower is better)
Translates to: LAGPWNAGTHGFSAATSPRPIVV*GATFLL
Trigger: GAGCAGGAACGTGGCTCCCAAGACCACAATGGGGCG...TGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CAA 90 bp CTGAGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCCAGTGGCACTCCTGCTaGTGGTTGCACACCTTCTCT +
Preference number: 5 (lower is better)
Translates to: LSGTSWTVECWNAWLLCRQWHSC*WLHTFS
Trigger: AGAGAAGGTGTGCAACCACAAGCAGGAGTGCCACTG...GCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCTCAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485491.6
CDS-3UTR CAA 90 bp CAGCATCTGGAACTCTGCATTGTCCACGACCACATACAGCTCCACGTAGCGGGTAGGTGGAGGGTGAAGTaGTGCCCTGTGGCCCCAAGG +
Preference number: 5 (lower is better)
Translates to: QHLELCIVHDHIQLHVAGRWRVK*CPVAPR
Trigger: CCTTGGGGCCACAGGGCACAACTTCACCCTCCACCT...ACCCGCTACGTGGAGCTGTATGTGGTCGTGGACAATGCAGAGTTCCAGATGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560135.5
CDS-3UTR CAA 90 bp GGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGCTGAGGTCAGGGGCGTaGGCGAGGCACACCGACTGC +
Preference number: 5 (lower is better)
Translates to: GMLERMASLPQLLQISTQLRSGA*ARHTDC
Trigger: GCAGTCGGTGTGCCTCGCCAACGCCCCTGACCTCAG...CTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CAA 90 bp AAGGAATTGGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTCCAGCCGGCTTCACCTaGCACTCCTGGCAGCAGGTA +
Preference number: 5 (lower is better)
Translates to: KELAEGVDSRSLSGRCIPPAGFT*HSWQQV
Trigger: TACCTGCTGCCAGGAGTGCAAGGTGAAGCCGGCTGG...AGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAATTCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CAA 90 bp ACTGACACCCTCTCGAAGAGCACGCAGGGGAACCTGGTCCTGGGATGGAGTCTTCACTCCTGCTTGTGGTaGCACACCCCATGGTTGTGG +
Preference number: 5 (lower is better)
Translates to: TDTLSKSTQGNLVLGWSLHSCLW*HTPWLW
Trigger: CCACAACCATGGGGTGTGCAACCACAAGCAGGAGTG...AAGACTCCATCCCAGGACCAGGTTCCCCTGCGTGCTCTTCGAGAGGGTGTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CAA 90 bp GAATTGGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGAGCAGTGGCACTCCTGCTaGTGGTTGCACACCCCATGG +
Preference number: 5 (lower is better)
Translates to: ELAEGVDSRSLSGRCIPEQWHSC*WLHTPW
Trigger: CCATGGGGTGTGCAACCACAAGCAGGAGTGCCACTG...CTCAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CAA 90 bp CTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGCGCAGTGGTGGAACAGGGGGTaGGAGCGCCCCATTGTGGTC +
Preference number: 5 (lower is better)
Translates to: LERMASLPQLLQISTQAQWWNRG*ERPIVV
Trigger: GACCACAATGGGGCGCTCCAACCCCCTGTTCCACCA...CTGCGCCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CAA 90 bp AGCGGCACTAGCTGGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCAACCACTCCTGCTTGTGGTaGCACACCTTCTCTGGTCCA +
Preference number: 5 (lower is better)
Translates to: SGTSWTVECWNAWLLCRNHSCLW*HTFSGP
Trigger: TGGACCAGAGAAGGTGTGCAACCACAAGCAGGAGTG...GTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAGTGCCGCT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485491.6
CDS-3UTR CAA 90 bp CTAGCTGGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCACAACAGCACCCTGCTTaGGTGCCTGCCGGGTGTAGA +
Preference number: 5 (lower is better)
Translates to: LAGPWNAGTHGFSAATSPQQHPA*VPAGCR
Trigger: TCTACACCCGGCAGGCACCAAAGCAGGGTGCTGTTG...TGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCAGCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485491.6
CDS-3UTR CAA 90 bp AAGGAATTGGCTGAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTACGCCCACGGGGTTCTaGCTGTGGTCCTGGTTCACA +
Preference number: 5 (lower is better)
Translates to: KELAEGVDSRSLSGRCIPTPTGF*LWSWFT
Trigger: TGTGAACCAGGACCACAGCAAGAACCCCGTGGGCGT...AGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTCAGCCAATTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CAA 90 bp GAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGAGGTTAGAACACTGTACCGGCTGGCCTaGCAGCCTGGTAGGATGTCA +
Preference number: 5 (lower is better)
Translates to: EGVDSRSLSGRCIPEVRTLYRLA*QPGRMS
Trigger: TGACATCCTACCAGGCTGCAAGGCCAGCCGGTACAG...TGTTCTAACCTCAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CAA 90 bp GAGGGCGTGGACAGCAGGAGCCTCTCAGGTAGATGCATTCCTGAGGTTAGAACAGCTTCAGGGCAACCTTaGGGCCAACAGCACCCTCAG +
Preference number: 5 (lower is better)
Translates to: EGVDSRSLSGRCIPEVRTASGQP*GQQHPQ
Trigger: CTGAGGGTGCTGTTGGCCCAAAGGTTGCCCTGAAGC...TGTTCTAACCTCAGGAATGCATCTACCTGAGAGGCTCCTGCTGTCCACGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CAA 90 bp GACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACGCCCACGGGGTTCTaGCTGTGGTCCTGGTTCACA +
Preference number: 5 (lower is better)
Translates to: DRGMLERMASLPQLLQISTPTGF*LWSWFT
Trigger: TGTGAACCAGGACCACAGCAAGAACCCCGTGGGCGT...GGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CAA 90 bp GGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCACGCCCACGGGGTTCTaGCTGTGGTCCTGGTTCACA +
Preference number: 5 (lower is better)
Translates to: GPWNAGTHGFSAATSPNFTPTGF*LWSWFT
Trigger: TGTGAACCAGGACCACAGCAAGAACCCCGTGGGCGT...GAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CAA 90 bp CTGGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTTGCACACCCCATGGTaGTGGCACTGGGCAGAGCAG +
Preference number: 5 (lower is better)
Translates to: LDRGMLERMASLPQLLQILHTPW*WHWAEQ
Trigger: CTGCTCTGCCCAGTGCCACAACCATGGGGTGTGCAA...AATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CAA 90 bp GACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCGTGATGAGCTGTACGTaGTCATGCAGGTGCCGCCGT +
Preference number: 5 (lower is better)
Translates to: DRGMLERMASLPQLLQISVMSCT*SCRCRR
Trigger: ACGGCGGCACCTGCATGACAACGTACAGCTCATCAC...GGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CAA 90 bp GGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGCTGTACCGGCTGGCCTaGCAGCCTGGTAGGATGTCA +
Preference number: 5 (lower is better)
Translates to: GMLERMASLPQLLQISTQLYRLA*QPGRMS
Trigger: TGACATCCTACCAGGCTGCAAGGCCAGCCGGTACAG...CTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CAA 90 bp GGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGCAGTGGCACTCCTGCTaGTGGTTGCACACCCCATGG +
Preference number: 5 (lower is better)
Translates to: GMLERMASLPQLLQISTQQWHSC*WLHTPW
Trigger: CCATGGGGTGTGCAACCACAAGCAGGAGTGCCACTG...CTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CAA 90 bp TTCCTAAGCTTAAACACACACAAAGCTGGGGCTGTCCCTCTTGAATCCCATGGGGGTTGGAGCGCCCCATaGTGGTCTTGGGAGCCACGT +
Preference number: 5 (lower is better)
Translates to: FLSLNTHKAGAVPLESHGGWSAP*WSWEPR
Trigger: ACGTGGCTCCCAAGACCACAATGGGGCGCTCCAACC...CCCATGGGATTCAAGAGGGACAGCCCCAGCTTTGTGTGTGTTTAAGCTTAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000445355.8
CDS-3UTR CAA 90 bp GGACCGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCTCACACATGTCCTTCTaGGGACGGCACAGCTCACCA +
Preference number: 5 (lower is better)
Translates to: GPWNAGTHGFSAATSPNFSHMSF*GRHSSP
Trigger: TGGTGAGCTGTGCCGTCCCAAGAAGGACATGTGTGA...GAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CAA 90 bp TTCCTAAGCTTAAACACACACAAAGCTGGGGCTGTCCCTCTTGAATCCCATGGGTTGCACACCCCATGGTaGTGGCACTGGGCAGAGCAG +
Preference number: 5 (lower is better)
Translates to: FLSLNTHKAGAVPLESHGLHTPW*WHWAEQ
Trigger: CTGCTCTGCCCAGTGCCACAACCATGGGGTGTGCAA...CCCATGGGATTCAAGAGGGACAGCCCCAGCTTTGTGTGTGTTTAAGCTTAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CAA 90 bp CGTGGAATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACAGGTGCGAACGTTGGCTaGATGACCTGCTTTGGTGCC +
Preference number: 5 (lower is better)
Translates to: RGMLERMASLPQLLQISTGANVG*MTCFGA
Trigger: GGCACCAAAGCAGGTCATCAAGCCAACGTTCGCACC...TGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATTCCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS CCA 90 bp TGTGGTTGCACACCCCATGGTTGTGGCACTGGGCAGAGCAGTTGCTaGATCTGTAAACGTGTAAGTCCTGGCAACGTCCTTTCCAGCAAA +
Preference number: 5 (lower is better)
Translates to: CGCTPHGCGTGQSSC*ICKRVSPGNVLSSK
Trigger: TTTGCTGGAAAGGACGTTGCCAGGACTTACACGTTTACAGATCCAGCAACTGCTCTGCCCAGTGCCACAACCATGGGGTGTGCAACCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS-3UTR CAA 90 bp CTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGCGCAGATCTGGAACTCTGCATaGTCCACGACCACATACAGC +
Preference number: 5 (lower is better)
Translates to: LERMASLPQLLQISTQAQIWNSA*STTTYS
Trigger: GCTGTATGTGGTCGTGGACAATGCAGAGTTCCAGAT...CTGCGCCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS-3UTR CAA 90 bp AATGCTGGAACGCATGGCTTCTCTGCCGCAACTTCTCCAAATTTCCACACAGGCTCACACATGTCCTTCTaGGGACGGCACAGCTCACCA +
Preference number: 5 (lower is better)
Translates to: NAGTHGFSAATSPNFHTGSHMSF*GRHSSP
Trigger: TGGTGAGCTGTGCCGTCCCAAGAAGGACATGTGTGA...GCCTGTGTGGAAATTTGGAGAAGTTGCGGCAGAGAAGCCATGCGTTCCAGCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS CCA 72 bp TCATCGCGCCCAGCAGCCAGAGCCCGAGGCCGCGCATaGCCGGGTCGGGGAGCAGAGGCGGAGGTGACAGCC +
Preference number: 6 (lower is better)
Translates to: SSRPAARARGRA*PGRGAEAEVTA
Trigger: GGCTGTCACCTCCGCCTCTGCTCCCCGACCCGGCCATGCGCGGCCTCGGGCTCTGGCTGCTGGGCGCGATGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000445355.8
ENST00000463298.5
ENST00000485491.6
ENST00000486609.1
ENST00000559180.1
ENST00000560135.5
CDS CCA 72 bp GCGGTTCCGGCAGTCCTGGGGCGACGGCAAAGGCCTTaGCAGGCTGCACTGGGGCCGGGCTGGGCTCCAGGG +
Preference number: 6 (lower is better)
Translates to: AVPAVLGRRQRP*QAALGPGWAPG
Trigger: CCCTGGAGCCCAGCCCGGCCCCAGTGCAGCCTGCCAAGGCCTTTGCCGTCGCCCCAGGACTGCCGGAACCGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468964.1
CDS CCA 72 bp CCGCAGGTCCCGGCCGTCTGCAGCAGGTGCTCAGCCTaGTACACGGCGTGCCGTCCGCCCTCGCCACCTTCA +
Preference number: 6 (lower is better)
Translates to: PQVPAVCSRCSA*YTACRPPSPPS
Trigger: TGAAGGTGGCGAGGGCGGACGGCACGCCGTGTACCAGGCTGAGCACCTGCTGCAGACGGCCGGGACCTGCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000463298.5
ENST00000485491.6
ENST00000486609.1
ENST00000537099.5
ENST00000559180.1
ENST00000560135.5
CDS TCA 72 bp ACAGGTTCCCACACACGGGGCCGCCCACCAGGTGGCTaGGGTCAGGGGCGTTGGCGAGGCACACCGACTGCG +
Preference number: 6 (lower is better)
Translates to: TGSHTRGRPPGG*GQGRWRGTPTA
Trigger: CGCAGTCGGTGTGCCTCGCCAACGCCCCTGACCTCAGCCACCTGGTGGGCGGCCCCGTGTGTGGGAACCTGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS GCA 72 bp GCCGTCTGCAGCAGGTGCTCAGCCTGGTACACGGCGTaGCGTCCGCCCTCGCCACCTTCATCCAGGGGCTCG +
Preference number: 6 (lower is better)
Translates to: AVCSRCSAWYTA*RPPSPPSSRGS
Trigger: CGAGCCCCTGGATGAAGGTGGCGAGGGCGGACGGCACGCCGTGTACCAGGCTGAGCACCTGCTGCAGACGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000463298.5
ENST00000485491.6
ENST00000486609.1
ENST00000537099.5
ENST00000559180.1
ENST00000560135.5
CDS CAA 90 bp CCGCCCTTGGCCGGCACGCGGCTGGCAGCCTGGTGGAACAGGGGGTaGGAGCGCCCCATTGTGGTCTTGGGAGCCACGTTCCTGCTCAGG +
Preference number: 6 (lower is better)
Translates to: PPLAGTRLAAWWNRG*ERPIVVLGATFLLR
Trigger: CCTGAGCAGGAACGTGGCTCCCAAGACCACAATGGGGCGCTCCAACCCCCTGTTCCACCAGGCTGCCAGCCGCGTGCCGGCCAAGGGCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000445355.8
ENST00000485491.6
CDS GCA 72 bp GCCGGCTTCACCTTGCACTCCTGGCAGCAGGTACCGTaGGCACACTGGGCCCCCTCAGCCAGCTGGCAGGTG +
Preference number: 6 (lower is better)
Translates to: AGFTLHSWQQVP*AHWAPSASWQV
Trigger: CACCTGCCAGCTGGCTGAGGGGGCCCAGTGTGCGCACGGTACCTGCTGCCAGGAGTGCAAGGTGAAGCCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS GCA 72 bp TCACCAGCCGGCTTGCACTCCTGGCAGCAGGTACCGTaGGCACACTGGGCCCCCTCAGCCAGCTGGCAGGTG +
Preference number: 6 (lower is better)
Translates to: SPAGLHSWQQVP*AHWAPSASWQV
Trigger: CACCTGCCAGCTGGCTGAGGGGGCCCAGTGTGCGCACGGTACCTGCTGCCAGGAGTGCAAGCCGGCTGGTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468964.1
CDS CCA 72 bp CCGGCACGCGGCTGGCAGCCTGGTGGAACAGGGGGTTaGAGCGCCCCATTGTGGTCTTGGGAGCCACGTTCC +
Preference number: 6 (lower is better)
Translates to: PARGWQPGGTGG*SAPLWSWEPRS
Trigger: GGAACGTGGCTCCCAAGACCACAATGGGGCGCTCCAACCCCCTGTTCCACCAGGCTGCCAGCCGCGTGCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000445355.8
ENST00000485491.6
CDS CCA 72 bp CTCGGCCTGGCAAACCCGGGCAGGAGCCCCCTCACCTaGTTCACAGCCCCTGAGCTGTGGGAGCACATGGCG +
Preference number: 6 (lower is better)
Translates to: LGLANPGRSPLT*FTAPELWEHMA
Trigger: CGCCATGTGCTCCCACAGCTCAGGGGCTGTGAACCAGGTGAGGGGGCTCCTGCCCGGGTTTGCCAGGCCGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537099.5
CDS CAA 72 bp GCCGGCACGCGGCTGGCAGCCTGGTGGAACAGGGGGTaGGAGCGCCCCATTGTGGTCTTGGGAGCCACGTTC +
Preference number: 6 (lower is better)
Translates to: AGTRLAAWWNRG*ERPIVVLGATF
Trigger: GAACGTGGCTCCCAAGACCACAATGGGGCGCTCCAACCCCCTGTTCCACCAGGCTGCCAGCCGCGTGCCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000445355.8
ENST00000485491.6
CDS TCA 72 bp GCAGACGCCACGGCAACACGACCTCATACTGCTCCATaGGGGCCCAGGGCCGGCTGGGGGCAATCGCAGGCA +
Preference number: 6 (lower is better)
Translates to: ADATATRPHTAP*GPRAGWGQSQA
Trigger: TGCCTGCGATTGCCCCCAGCCGGCCCTGGGCCCTCATGGAGCAGTATGAGGTCGTGTTGCCGTGGCGTCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000463298.5
ENST00000486609.1
ENST00000559180.1
CDS TCA 72 bp ACCCCTGAGGCCGGCACAGGTGCTGAGGCTGGCGGCTaGGTCCGGGTACCCCTCTACGTGGCCCTGGTAGAA +
Preference number: 6 (lower is better)
Translates to: TPEAGTGAEAGG*VRVPLYVALVE
Trigger: TTCTACCAGGGCCACGTAGAGGGGTACCCGGACTCAGCCGCCAGCCTCAGCACCTGTGCCGGCCTCAGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000486609.1
ENST00000537099.5
ENST00000560135.5
CDS TCA 72 bp CCACCTGAGGCCGGCACAGGTGCTGAGGCTGGCGGCTaGGTCCGGGTACCCCTCTACGTGGCCCTGGTAGAA +
Preference number: 6 (lower is better)
Translates to: PPEAGTGAEAGG*VRVPLYVALVE
Trigger: TTCTACCAGGGCCACGTAGAGGGGTACCCGGACTCAGCCGCCAGCCTCAGCACCTGTGCCGGCCTCAGGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463298.5
ENST00000485491.6
ENST00000559180.1
CDS TCA 72 bp GGCAGCGGGCAGGTCGGTAGTAGGTTCCCCGGATGCTaGGGTAAGGACAGGGCTGGGGCCGGAACTGCCCTC +
Preference number: 6 (lower is better)
Translates to: GSGQVGSRFPGC*GKDRAGAGTAL
Trigger: GAGGGCAGTTCCGGCCCCAGCCCTGTCCTTACCTCAGCATCCGGGGAACCTACTACCGACCTGCCCGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486609.1
CDS GCA 72 bp GCCGGTGGGCCTGTGTCCTGCAGCACCCACACACAGTaGTCAGAGACGCTGTGGGTGCCAGCGGGTGCCAGT +
Preference number: 6 (lower is better)
Translates to: AGGPVSCSTHTQ*SETLWVPAGAS
Trigger: ACTGGCACCCGCTGGCACCCACAGCGTCTCTGAGCACTGTGTGTGGGTGCTGCAGGACACAGGCCCACCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537099.5
CDS CCA 72 bp CAAGTGGGAGGGCAGAGCTCGGCGGACTCGGGGGCCTaGCAGACGCCACGGCAACACGACCTCATACTGCTC +
Preference number: 6 (lower is better)
Translates to: QVGGQSSADSGA*QTPRQHDLILL
Trigger: GAGCAGTATGAGGTCGTGTTGCCGTGGCGTCTGCCAGGCCCCCGAGTCCGCCGAGCTCTGCCCTCCCACTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000463298.5
ENST00000486609.1
ENST00000537099.5
ENST00000559180.1
CDS CCA 72 bp CCCGCCATGATGCAGCGGCCGGCCTCGAAGCGTTCCTaGCAGCGGCAGCCCTGGACGTTCTCATCATGGTCC +
Preference number: 6 (lower is better)
Translates to: PAMMQRPASKRS*QRQPWTFSSWS
Trigger: GGACCATGATGAGAACGTCCAGGGCTGCCGCTGCCAGGAACGCTTCGAGGCCGGCCGCTGCATCATGGCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
ENST00000537099.5
ENST00000561175.1
CDS CCA 72 bp CCCCATGTGCAGGCTGGGGCTCGGCCTGCAGAGCTCTaGGACAGCCTTAGCTGTGCCACCGGCTGGATGAGC +
Preference number: 6 (lower is better)
Translates to: PHVQAGARPAEL*DSLSCATGWMS
Trigger: GCTCATCCAGCCGGTGGCACAGCTAAGGCTGTCCCAGAGCTCTGCAGGCCGAGCCCCAGCCTGCACATGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486609.1
CDS GCA 72 bp CGCCAGGGGCTCTGGCACCTCTGCAGCCAGGACCGCTaGCCACCTTGTCCACGTGATTCACCACCTCCAGCA +
Preference number: 6 (lower is better)
Translates to: RQGLWHLCSQDR*PPCPRDSPPPA
Trigger: TGCTGGAGGTGGTGAATCACGTGGACAAGGTGGGCAGCGGTCCTGGCTGCAGAGGTGCCAGAGCCCCTGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463298.5
CDS CCA 72 bp CCTGCCCGCGAGGCTGCTCCGTCACCTCGGAGCCATTaGCAGCCGTATAGGTCTCTGTGTAGCCGGAGCCCA +
Preference number: 6 (lower is better)
Translates to: PAREAAPSPRSH*QPYRSLCSRSP
Trigger: TGGGCTCCGGCTACACAGAGACCTATACGGCTGCCAATGGCTCCGAGGTGACGGAGCAGCCTCGCGGGCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000463298.5
ENST00000485491.6
ENST00000486609.1
ENST00000537099.5
ENST00000559180.1
ENST00000560135.5
CDS CCA 72 bp CGGCCGGCCTCGAAGCGTTCCTGGCAGCGGCAGCCCTaGACGTTCTCATCATGGTCCATGCCCAGGTTGTGG +
Preference number: 6 (lower is better)
Translates to: RPASKRSWQRQP*TFSSWSMPRLW
Trigger: CCACAACCTGGGCATGGACCATGATGAGAACGTCCAGGGCTGCCGCTGCCAGGAACGCTTCGAGGCCGGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
ENST00000537099.5
ENST00000561175.1
CDS CCA 72 bp GGTGGAACAGGGGGTTGGAGCGCCCCATTGTGGTCTTaGGAGCCACGTTCCTGCTCAGGATGCGGCTCCGGG +
Preference number: 6 (lower is better)
Translates to: GGTGGWSAPLWS*EPRSCSGCGSG
Trigger: CCCGGAGCCGCATCCTGAGCAGGAACGTGGCTCCCAAGACCACAATGGGGCGCTCCAACCCCCTGTTCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000445355.8
ENST00000485491.6
CDS TCA 72 bp ACATCCTGGGGAAACTGGAGCCAATGCTGCCCGCCATaGTGCAGCGGCCGGCCTCGAAGCGTTCCTGGCAGC +
Preference number: 6 (lower is better)
Translates to: TSWGNWSQCCPP*CSGRPRSVPGS
Trigger: GCTGCCAGGAACGCTTCGAGGCCGGCCGCTGCATCATGGCGGGCAGCATTGGCTCCAGTTTCCCCAGGATGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS TCA 72 bp GCAGACGCCACGGCAACACGACCTCATACTGCTCCATaGGGGCCCAGGGCCGGCTGGGGGCAATCGCAGATA +
Preference number: 6 (lower is better)
Translates to: ADATATRPHTAP*GPRAGWGQSQI
Trigger: TATCTGCGATTGCCCCCAGCCGGCCCTGGGCCCTCATGGAGCAGTATGAGGTCGTGTTGCCGTGGCGTCTGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537099.5
CDS GCA 72 bp GCAGCACCCACACACAGTGCTCAGAGACGCTGTGGGTaGCAGCGGGTGCCAGTGACTCCACAGGTCTCCAGG +
Preference number: 6 (lower is better)
Translates to: AAPTHSAQRRCG*QRVPVTPQVSR
Trigger: CCTGGAGACCTGTGGAGTCACTGGCACCCGCTGGCACCCACAGCGTCTCTGAGCACTGTGTGTGGGTGCTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537099.5
CDS GCA 72 bp TCGACACCCGTGATGAGCTGTACGTTGTCATGCAGGTaGCGCCGTGTCCGTTGCCGTGCCTGCCAGGTCAGG +
Preference number: 6 (lower is better)
Translates to: STPVMSCTLSCR*RRVRCRACQVR
Trigger: CCTGACCTGGCAGGCACGGCAACGGACACGGCGGCACCTGCATGACAACGTACAGCTCATCACGGGTGTCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
ENST00000537099.5
ENST00000561175.1
CDS GCA 72 bp CCGTTCTCCTGGAAGGCGTCTTCCGGGCACTCAGGGTaGCGGCCGTCACAGAACTCCTCGAGGTCACACATG +
Preference number: 6 (lower is better)
Translates to: PFSWKASSGHSG*RPSQNSSRSHM
Trigger: CATGTGTGACCTCGAGGAGTTCTGTGACGGCCGGCACCCTGAGTGCCCGGAAGACGCCTTCCAGGAGAACGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000468964.1
ENST00000485491.6
CDS GCA 72 bp GATGCGGCTCCGGGCTTTGCGGTAGACGATGATGCCTaGCAGGGTGACCAGCACAACTGCCAGGAGCACCAG +
Preference number: 6 (lower is better)
Translates to: DAAPGFAVDDDA*QGDQHNCQEHQ
Trigger: CTGGTGCTCCTGGCAGTTGTGCTGGTCACCCTGGCAGGCATCATCGTCTACCGCAAAGCCCGGAGCCGCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445355.8
ENST00000485491.6
CDS GCA 72 bp GCCGGGTGTGCTGTGGGCTTCAGAGTGGCCTGGTCCTaGCCCGAAGGACCAGAGGCTCCAGTTTGTTGCCTA +
Preference number: 6 (lower is better)
Translates to: AGCAVGFRVAWS*PEGPEAPVCCL
Trigger: TAGGCAACAAACTGGAGCCTCTGGTCCTTCGGGGCAGGACCAGGCCACTCTGAAGCCCACAGCACACCCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463298.5
CDS GCA 72 bp GTACAGGCCACGCCCACGGGGTTCTTGCTGTGGTCCTaGAGGAGGGTCTGTGCTCTCAGGAACCATGTGGCC +
Preference number: 6 (lower is better)
Translates to: VQATPTGFLLWS*RRVCALRNHVA
Trigger: GGCCACATGGTTCCTGAGAGCACAGACCCTCCTGCAGGACCACAGCAAGAACCCCGTGGGCGTGGCCTGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537099.5
CDS CCA 72 bp GACCTGCTTTGGTGCCTGCCGGGTGTAGACAGGAACTaGGAAGGGTGGGCTGGACACAGTGACCGGAGGAGC +
Preference number: 6 (lower is better)
Translates to: DLLWCLPGVDRN*EGWAGHSDRRS
Trigger: GCTCCTCCGGTCACTGTGTCCAGCCCACCCTTCCCAGTTCCTGTCTACACCCGGCAGGCACCAAAGCAGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS CCA 72 bp ACCCTGCTTTGGTGCCTGCCGGGTGTAGACAGGAACTaGGAAGGGTGGGCTGGACACAGTGACCGGAGGAGC +
Preference number: 6 (lower is better)
Translates to: TLLWCLPGVDRN*EGWAGHSDRRS
Trigger: GCTCCTCCGGTCACTGTGTCCAGCCCACCCTTCCCAGTTCCTGTCTACACCCGGCAGGCACCAAAGCAGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485491.6
CDS CCA 72 bp TCCTGCAGCACCCACACACAGTGCTCAGAGACGCTGTaGGTGCCAGCGGGTGCCAGTGACTCCACAGGTCTC +
Preference number: 6 (lower is better)
Translates to: SCSTHTQCSETL*VPAGASDSTGL
Trigger: GAGACCTGTGGAGTCACTGGCACCCGCTGGCACCCACAGCGTCTCTGAGCACTGTGTGTGGGTGCTGCAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537099.5
CDS CAA 72 bp GTCCCGGTGAAGTCGACACCCGTGATGAGCTGTACGTaGTCATGCAGGTGCCGCCGTGTCCGTTGCCGTGCC +
Preference number: 6 (lower is better)
Translates to: VPVKSTPVMSCT*SCRCRRVRCRA
Trigger: GGCACGGCAACGGACACGGCGGCACCTGCATGACAACGTACAGCTCATCACGGGTGTCGACTTCACCGGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
ENST00000537099.5
ENST00000561175.1
CDS CAA 90 bp ACCCGTGATGAGCTGTACGTTGTCATGCAGGTGCCGCCGTGTCCGTaGCCGTGCCTGCCAGGTCAGGAGGTTCTCCAGTGTGACACTGGG +
Preference number: 6 (lower is better)
Translates to: TRDELYVVMQVPPCP*PCLPGQEVLQCDTG
Trigger: CCCAGTGTCACACTGGAGAACCTCCTGACCTGGCAGGCACGGCAACGGACACGGCGGCACCTGCATGACAACGTACAGCTCATCACGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
ENST00000537099.5
ENST00000561175.1
CDS TCA 72 bp AGCCCAGCAGGTCCCTGTTCTTCCGCAGGTGGAGGGTaGAGTTGTGCCCTGTGGCCCCAAGGACGTAGCTCA +
Preference number: 6 (lower is better)
Translates to: SPAGPCSSAGGG*SCALWPQGRSS
Trigger: TGAGCTACGTCCTTGGGGCCACAGGGCACAACTTCACCCTCCACCTGCGGAAGAACAGGGACCTGCTGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000463298.5
ENST00000485491.6
ENST00000486609.1
ENST00000537099.5
ENST00000559180.1
ENST00000560135.5
CDS TCA 72 bp GTACAGGAGGGTGAGCCTCTTGGGCTTGGCGTCCCCTaGGCAGACCCCCATGCAAGACAGCAAAGGCCTGAG +
Preference number: 6 (lower is better)
Translates to: VQEGEPLGLGVP*ADPHARQQRPE
Trigger: CTCAGGCCTTTGCTGTCTTGCATGGGGGTCTGCTCAGGGGACGCCAAGCCCAAGAGGCTCACCCTCCTGTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463298.5
CDS GCA 72 bp GTGAAGTCGACACCCGTGATGAGCTGTACGTTGTCATaGAGGTGCCGCCGTGTCCGTTGCCGTGCCTGCCAG +
Preference number: 6 (lower is better)
Translates to: VKSTPVMSCTLS*RCRRVRCRACQ
Trigger: CTGGCAGGCACGGCAACGGACACGGCGGCACCTGCATGACAACGTACAGCTCATCACGGGTGTCGACTTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
ENST00000537099.5
ENST00000561175.1
CDS GCA 72 bp CACGGGGTTCTTGCTGTGGTCCTGCAGGAGGGTCTGTaGTCTCAGGAACCATGTGGCCAACTCCCCACGCCT +
Preference number: 6 (lower is better)
Translates to: HGVLAVVLQEGL*SQEPCGQLPTP
Trigger: AGGCGTGGGGAGTTGGCCACATGGTTCCTGAGAGCACAGACCCTCCTGCAGGACCACAGCAAGAACCCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537099.5
CDS CCA 72 bp GGTTCATACGCAGTGCCATCCTCTGTGGTGAGCGCGTaGCACACATCCACGATGCAGATGGCACGCCCCAGG +
Preference number: 6 (lower is better)
Translates to: GSYAVPSSVVSA*HTSTMQMARPR
Trigger: CCTGGGGCGTGCCATCTGCATCGTGGATGTGTGCCACGCGCTCACCACAGAGGATGGCACTGCGTATGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS CCA 72 bp CTGACATGGGTCCCCCAGGCACTCCCGGCTCTAGCCTaGACATCACCTTCTCTGGACCTGGAACGAAGCTCC +
Preference number: 6 (lower is better)
Translates to: LTWVPQALPALA*TSPSLDLERSS
Trigger: GGAGCTTCGTTCCAGGTCCAGAGAAGGTGATGTCCAGGCTAGAGCCGGGAGTGCCTGGGGGACCCATGTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559018.1
CDS TCA 72 bp CGGGCACTGGTTCATACGCAGTGCCATCCTCTGTGGTaGGCGCGTGGCACACATCCACGATGCAGATGGCAC +
Preference number: 6 (lower is better)
Translates to: RALVHTQCHPLW*ARGTHPRCRWH
Trigger: GTGCCATCTGCATCGTGGATGTGTGCCACGCGCTCACCACAGAGGATGGCACTGCGTATGAACCAGTGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000485491.6
CDS GCA 72 bp GTAGACGATGATGCCTGCCAGGGTGACCAGCACAACTaGCAGGAGCACCAGAACCACCACCACGAAGACGGG +
Preference number: 6 (lower is better)
Translates to: VDDDACQGDQHN*QEHQNHHHEDG
Trigger: CCCGTCTTCGTGGTGGTGGTTCTGGTGCTCCTGGCAGTTGTGCTGGTCACCCTGGCAGGCATCATCGTCTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445355.8
ENST00000485491.6
CDS GCA 72 bp GTCCTTTCCAGCAAACCTTCTCTGGTCCACACCGGGTaGCCTCGGGCACTGGTTCATACGCAGTGCCATCCT +
Preference number: 6 (lower is better)
Translates to: VLSSKPSLVHTG*PRALVHTQCHP
Trigger: AGGATGGCACTGCGTATGAACCAGTGCCCGAGGGCACCCGGTGTGGACCAGAGAAGGTTTGCTGGAAAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8
CDS CCA 72 bp CGTCACAGAACTCCTCGAGGTCACACATGTCCTTCTTaGGACGGCACAGCTCACCAGCCGGCTTGCACTCCT +
Preference number: 6 (lower is better)
Translates to: RHRTPRGHTCPS*DGTAHQPACTP
Trigger: AGGAGTGCAAGCCGGCTGGTGAGCTGTGCCGTCCCAAGAAGGACATGTGTGACCTCGAGGAGTTCTGTGACG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468964.1
CDS GCA 72 bp GAACGCCACACATGTCAGCCCTGTACCGGCTGGCCTTaGAGCCTGGTAGGATGTCATAGGAGAAGCAGGACT +
Preference number: 6 (lower is better)
Translates to: ERHTCQPCTGWP*SLVGCHRRSRT
Trigger: AGTCCTGCTTCTCCTATGACATCCTACCAGGCTGCAAGGCCAGCCGGTACAGGGCTGACATGTGTGGCGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415217.7
ENST00000445355.8
ENST00000468964.1
ENST00000485491.6
CDS GCA 72 bp TGCACACCCCATGGTTGTGGCACTGGGCAGAGCAGTTaGTGGATCTGTAAACGTGTAAGTCCTGGCAACGTC +
Preference number: 6 (lower is better)
Translates to: CTPHGCGTGQSS*WICKRVSPGNV
Trigger: GACGTTGCCAGGACTTACACGTTTACAGATCCAGCAACTGCTCTGCCCAGTGCCACAACCATGGGGTGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415217.7
ENST00000445355.8