RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADAM7 (Homo sapiens)

Ensembl gene IDs: ENSG00000069206

Ensembl transcript IDs: ENST00000175238.10, ENST00000380789.5, ENST00000441335.6, ENST00000520720.1

Found 257 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGGACACAAAAGAACACCTTGAGAGGCATCTGTGTAAGAAGCAGCTaGAATCATTCCCAGGGTAATCCCCCATCCCATAACAAACGGATA +
Preference number: 1 (lower is better)
Translates to: RTQKNTLRGICVRSS*NHSQGNPPSHNKRI
Trigger: TATCCGTTTGTTATGGGATGGGGGATTACCCTGGGAATGATTTCAGCTGCTTCTTACACAGATGCCTCTCAAGGTGTTCTTTTGTGTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
3UTR GCA 90 bp TCTTCTGCCTCTTTCACTTTTAATTACCTAGAATCCGTGCCGCTCTaGCCTGCCTTCTTTGGCATTTCTGCAGGACTTTCATTTAAACCA +
Preference number: 1 (lower is better)
Translates to: SSASFTFNYLESVPL*PAFFGISAGLSFKP
Trigger: TGGTTTAAATGAAAGTCCTGCAGAAATGCCAAAGAAGGCAGGGCAGAGCGGCACGGATTCTAGGTAATTAAAAGTGAAAGAGGCAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
3UTR CCA 90 bp CCAAGTAGCTTACAGACTAACATCCACTGGGAATTTAAGGGGATATaGATTAGTTGTATAGAAAAGCCTAAAGCTCCAAGGACTACTTTT +
Preference number: 1 (lower is better)
Translates to: PSSLQTNIHWEFKGI*ISCIEKPKAPRTTF
Trigger: AAAAGTAGTCCTTGGAGCTTTAGGCTTTTCTATACAACTAATCCATATCCCCTTAAATTCCCAGTGGATGTTAGTCTGTAAGCTACTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441335.6
3UTR-3UTR TCA 90 bp CAGGGTAATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACATTCTTGTAACCCTCTaGTTTCTCTGTCAGCTTCTT +
Preference number: 2 (lower is better)
Translates to: QGNPPSHNKRIGRGQRQHILVTL*FLCQLL
Trigger: AAGAAGCTGACAGAGAAATCAGAGGGTTACAAGAAT...GTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATTACCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
3UTR CAA 90 bp GATAGGGAGAGGGCAGAGACAGCACAGAAATGGCACATTGTCAAATaGCACAGGACAAAGACCTTAGAAACCCTTCATAGGAGTTGTGAG +
Preference number: 2 (lower is better)
Translates to: DRERAETAQKWHIVK*HRTKTLETLHRSCE
Trigger: CTCACAACTCCTATGAAGGGTTTCTAAGGTCTTTGTCCTGTGCAATTTGACAATGTGCCATTTCTGTGCTGTCTCTGCCCTCTCCCTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
3UTR-3UTR TCA 90 bp GACAGCACAGAAATGGCACATTGTCAAATTGCACAGGACAAAGACCTTAGAAACGTGCTAAAGAGCATTTaGAAGACCACAAGACATTTT +
Preference number: 2 (lower is better)
Translates to: DSTEMAHCQIAQDKDLRNVLKSI*KTTRHF
Trigger: AAAATGTCTTGTGGTCTTTCAAATGCTCTTTAGCAC...GTTTCTAAGGTCTTTGTCCTGTGCAATTTGACAATGTGCCATTTCTGTGCTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
3UTR-3UTR GCA 90 bp AGGCATACAGTATGTGTCAGACACTATACAAATCATGGACATACGAAGAAGAAAAAATATCAGATGAAGTaGCAGACTGAAAGTAGCACA +
Preference number: 2 (lower is better)
Translates to: RHTVCVRHYTNHGHTKKKKYQMK*QTESST
Trigger: TGTGCTACTTTCAGTCTGGCACTTCATCTGATATTT...TTTCTTCTTCGTATGTCCATGATTTGTATAGTGTCTGACACATACTGTATGCCT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000441335.6
3UTR-3UTR CAA 90 bp CAGGGTAATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACATCCCCAGCCTAAGCTaGCACGGCCATTTTGGATAT +
Preference number: 3 (lower is better)
Translates to: QGNPPSHNKRIGRGQRQHIPSLS*HGHFGY
Trigger: ATATCCAAAATGGCCGTGCAAGCTTAGGCTGGGGAT...GTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATTACCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
3UTR-3UTR CAA 90 bp CAGGGTAATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACAAGGTTGTAAAGACGTaGCATCCAGAATCCCCAGCC +
Preference number: 3 (lower is better)
Translates to: QGNPPSHNKRIGRGQRQHKVVKT*HPESPA
Trigger: GGCTGGGGATTCTGGATGCAACGTCTTTACAACCTT...GTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATTACCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
3UTR-3UTR CAA 90 bp CAGGGTAATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACCCTAGGAATTTAGAATaGCCAGGAGCATTCTGTGTT +
Preference number: 3 (lower is better)
Translates to: QGNPPSHNKRIGRGQRQHPRNLE*PGAFCV
Trigger: AACACAGAATGCTCCTGGCAATTCTAAATTCCTAGG...GTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATTACCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
3UTR-3UTR CAA 90 bp TTCACTTTTAATTACCTAGAATCCGTGCCGCTCTGCCCTGCCTTCTTTGGCATTATCCCCAGCCTAAGCTaGCACGGCCATTTTGGATAT +
Preference number: 3 (lower is better)
Translates to: FTFNYLESVPLCPAFFGIIPSLS*HGHFGY
Trigger: ATATCCAAAATGGCCGTGCAAGCTTAGGCTGGGGAT...AATGCCAAAGAAGGCAGGGCAGAGCGGCACGGATTCTAGGTAATTAAAAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
3UTR GCA 72 bp TCTTTCACTTTTAATTACCTAGAATCCGTGCCGCTCTaGCCTGCCTTCTTTGGCATTTCTGCAGGACTTTCA +
Preference number: 3 (lower is better)
Translates to: SFTFNYLESVPL*PAFFGISAGLS
Trigger: TGAAAGTCCTGCAGAAATGCCAAAGAAGGCAGGGCAGAGCGGCACGGATTCTAGGTAATTAAAAGTGAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
3UTR-3UTR CAA 90 bp GCCTTCTTTGGCATTTCTGCAGGACTTTCATTTAAACCAGAATTAGTGCTAATGAAGGTTGTAAAGACGTaGCATCCAGAATCCCCAGCC +
Preference number: 3 (lower is better)
Translates to: AFFGISAGLSFKPELVLMKVVKT*HPESPA
Trigger: GGCTGGGGATTCTGGATGCAACGTCTTTACAACCTT...CATTAGCACTAATTCTGGTTTAAATGAAAGTCCTGCAGAAATGCCAAAGAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
3UTR-3UTR CAA 90 bp ACCTTAGAAACCCTTCATAGGAGTTGTGAGTATGTCCTCTCACTTGGAGTAAATCCTAGGAATTTAGAATaGCCAGGAGCATTCTGTGTT +
Preference number: 3 (lower is better)
Translates to: TLETLHRSCEYVLSLGVNPRNLE*PGAFCV
Trigger: AACACAGAATGCTCCTGGCAATTCTAAATTCCTAGG...ATTTACTCCAAGTGAGAGGACATACTCACAACTCCTATGAAGGGTTTCTAAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
3UTR-3UTR CAA 90 bp ACCTTAGAAACCCTTCATAGGAGTTGTGAGTATGTCCTCTCACTTGGAGTAAATTGTGCTAAAGAGCATTaGAAAGACCACAAGACATTT +
Preference number: 3 (lower is better)
Translates to: TLETLHRSCEYVLSLGVNCAKEH*KDHKTF
Trigger: AAATGTCTTGTGGTCTTTCAAATGCTCTTTAGCACA...ATTTACTCCAAGTGAGAGGACATACTCACAACTCCTATGAAGGGTTTCTAAGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
3UTR CCA 72 bp TTACAGACTAACATCCACTGGGAATTTAAGGGGATATaGATTAGTTGTATAGAAAAGCCTAAAGCTCCAAGG +
Preference number: 3 (lower is better)
Translates to: LQTNIHWEFKGI*ISCIEKPKAPR
Trigger: CCTTGGAGCTTTAGGCTTTTCTATACAACTAATCCATATCCCCTTAAATTCCCAGTGGATGTTAGTCTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441335.6
3UTR CCA 72 bp GAAAAACAACCAAGTAGCTTACAGACTAACATCCACTaGGAATTTAAGGGGATATGGATTAGTTGTATAGAA +
Preference number: 3 (lower is better)
Translates to: EKQPSSLQTNIH*EFKGIWISCIE
Trigger: TTCTATACAACTAATCCATATCCCCTTAAATTCCCAGTGGATGTTAGTCTGTAAGCTACTTGGTTGTTTTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441335.6
CDS-3UTR CCA 90 bp CAGGGTAATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACGGACAGGCAGGCGAGTaGCCAGTGCACATCTCAGGA +
Preference number: 4 (lower is better)
Translates to: QGNPPSHNKRIGRGQRQHGQAGE*PVHISG
Trigger: TCCTGAGATGTGCACTGGCCACTCGCCTGCCTGTCC...GTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATTACCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR GCA 90 bp CAGGGTAATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACCGTGCCGCTCTGCCCTaGCTTCTTTGGCATTTCTGC +
Preference number: 4 (lower is better)
Translates to: QGNPPSHNKRIGRGQRQHRAALP*LLWHFC
Trigger: GCAGAAATGCCAAAGAAGGCAGGGCAGAGCGGCACG...GTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATTACCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CCA 90 bp CAGGGTAATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACTGTCCTTCCTCACAGTaGCACTGGAGTCCGTGGCCA +
Preference number: 4 (lower is better)
Translates to: QGNPPSHNKRIGRGQRQHCPSSQ*HWSPWP
Trigger: TGGCCACGGACTCCAGTGCCACTGTGAGGAAGGACA...GTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATTACCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp CAGGGTAATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACGGACGAACCAGTTGTTaGCCCTCTACTCCAAGGATG +
Preference number: 4 (lower is better)
Translates to: QGNPPSHNKRIGRGQRQHGRTSC*PSTPRM
Trigger: CATCCTTGGAGTAGAGGGTCAACAACTGGTTCGTCC...GTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATTACCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp CAGGGTAATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACCATCACGCATTTTCCTaGAGGACAGGTGCATGGGAA +
Preference number: 4 (lower is better)
Translates to: QGNPPSHNKRIGRGQRQHHHAFS*RTGAWE
Trigger: TTCCCATGCACCTGTCCTTCAGGAAAATGCGTGATG...GTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATTACCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR GCA 90 bp CAGGGTAATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACTTCCTGAAGGACAGGTaGATGGGAACTCGTCATGCT +
Preference number: 4 (lower is better)
Translates to: QGNPPSHNKRIGRGQRQHFLKDR*MGTRHA
Trigger: AGCATGACGAGTTCCCATGCACCTGTCCTTCAGGAA...GTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATTACCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CCA 90 bp AATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACAGAAATTGTCCTTCCTCACAGTaGCACTGGAGTCCGTGGCCA +
Preference number: 4 (lower is better)
Translates to: NPPSHNKRIGRGQRQHRNCPSSQ*HWSPWP
Trigger: TGGCCACGGACTCCAGTGCCACTGTGAGGAAGGACA...ATTTCTGTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR GCA 90 bp AATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACAGAAATGGGAACTCGTCATGCTaGATCCCAAGGTTATGCCCC +
Preference number: 4 (lower is better)
Translates to: NPPSHNKRIGRGQRQHRNGNSSC*IPRLCP
Trigger: GGGGCATAACCTTGGGATGCAGCATGACGAGTTCCC...ATTTCTGTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR GCA 90 bp CAGGGTAATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACCCACAGGATTTTCATTaGACTGAGAGGGGCAATTGG +
Preference number: 4 (lower is better)
Translates to: QGNPPSHNKRIGRGQRQHPQDFH*TERGNW
Trigger: CCAATTGCCCCTCTCAGTGCAATGAAAATCCTGTGG...GTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATTACCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CCA 90 bp CAGGGTAATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACCTGTACAGGAATAATTaGCACCATACGGCACCCTCA +
Preference number: 4 (lower is better)
Translates to: QGNPPSHNKRIGRGQRQHLYRNN*HHTAPS
Trigger: TGAGGGTGCCGTATGGTGCCAATTATTCCTGTACAG...GTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATTACCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp AATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACAGAAATGGACGAACCAGTTGTTaGCCCTCTACTCCAAGGATG +
Preference number: 4 (lower is better)
Translates to: NPPSHNKRIGRGQRQHRNGRTSC*PSTPRM
Trigger: CATCCTTGGAGTAGAGGGTCAACAACTGGTTCGTCC...ATTTCTGTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp CAGGGTAATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACGAAACAGTAGCCTTCTaGGTTCTTGCAAGGAAATCC +
Preference number: 4 (lower is better)
Translates to: QGNPPSHNKRIGRGQRQHETVAF*VLARKS
Trigger: GGATTTCCTTGCAAGAACTCAGAAGGCTACTGTTTC...GTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATTACCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp CAGGGTAATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACAGATCTTTCCACATCTaGCATCTTTCTCCTCACAGG +
Preference number: 4 (lower is better)
Translates to: QGNPPSHNKRIGRGQRQHRSFHI*HLSPHR
Trigger: CCTGTGAGGAGAAAGATGTCAGATGTGGAAAGATCT...GTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATTACCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp AATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACAGAAATTCCACATTTTGTTCCTaGCGCCACCAGGCCAATGTC +
Preference number: 4 (lower is better)
Translates to: NPPSHNKRIGRGQRQHRNSTFCS*RHQANV
Trigger: GACATTGGCCTGGTGGCGTCAGGAACAAAATGTGGA...ATTTCTGTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR GCA 90 bp CAGGGTAATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACGGCTCAGTCCTTATCTaGTGCTCATCACCAAAGTAT +
Preference number: 4 (lower is better)
Translates to: QGNPPSHNKRIGRGQRQHGSVLI*CSSPKY
Trigger: ATACTTTGGTGATGAGCAGCAGATAAGGACTGAGCC...GTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATTACCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CCA 90 bp CAGGGTAATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACAATTTCTGGCAGGATTaGCTCAGTCCTTATCTGCTG +
Preference number: 4 (lower is better)
Translates to: QGNPPSHNKRIGRGQRQHNFWQD*LSPYLL
Trigger: CAGCAGATAAGGACTGAGCCAATCCTGCCAGAAATT...GTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATTACCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp CAGGGTAATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACAGAGCCACTTCCCACTaGGTAATACAACATGATCAA +
Preference number: 4 (lower is better)
Translates to: QGNPPSHNKRIGRGQRQHRATSH*VIQHDQ
Trigger: TTGATCATGTTGTATTACTCAGTGGGAAGTGGCTCT...GTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATTACCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp TTCACTTTTAATTACCTAGAATCCGTGCCGCTCTGCCCTGCCTTCTTTGGCATTGGATTAGTACACTCCTaGGCAGGGCCACAGTCACAC +
Preference number: 4 (lower is better)
Translates to: FTFNYLESVPLCPAFFGIGLVHS*AGPQSH
Trigger: GTGTGACTGTGGCCCTGCTCAGGAGTGTACTAATCC...AATGCCAAAGAAGGCAGGGCAGAGCGGCACGGATTCTAGGTAATTAAAAGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp AATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACAGAAATGCTCACTTGGCACTTTaGTTGGGATCTGCGATTCCT +
Preference number: 4 (lower is better)
Translates to: NPPSHNKRIGRGQRQHRNAHLAL*LGSAIP
Trigger: AGGAATCGCAGATCCCAATCAAAGTGCCAAGTGAGC...ATTTCTGTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR GCA 90 bp CAGGGTAATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACGAGGATGACCATTTCTaGGATACACAGTATCATCAG +
Preference number: 4 (lower is better)
Translates to: QGNPPSHNKRIGRGQRQHEDDHF*DTQYHQ
Trigger: CTGATGATACTGTGTATCGCAGAAATGGTCATCCTC...GTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATTACCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR GCA 90 bp CAGGGTAATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACACAGCATTCTCCTTCTaGACAAGTAAATCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: QGNPPSHNKRIGRGQRQHTAFSF*TSKSWL
Trigger: AAGCCAGGATTTACTTGTGCAGAAGGAGAATGCTGT...GTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATTACCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CCA 90 bp CAGGGTAATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACTGCACAAGTAAATCCTaGCTTCAGTACACATGTGTG +
Preference number: 4 (lower is better)
Translates to: QGNPPSHNKRIGRGQRQHCTSKS*LQYTCV
Trigger: CACACATGTGTACTGAAGCCAGGATTTACTTGTGCA...GTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATTACCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CCA 90 bp CAGGGTAATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACAACTTCAAGCTCACTTaGCACTTTGATTGGGATCTG +
Preference number: 4 (lower is better)
Translates to: QGNPPSHNKRIGRGQRQHNFKLT*HFDWDL
Trigger: CAGATCCCAATCAAAGTGCCAAGTGAGCTTGAAGTT...GTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATTACCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp CAGGGTAATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACTTTGGTCGTTTATTCTaGAGAATCCCCTTAGACCAT +
Preference number: 4 (lower is better)
Translates to: QGNPPSHNKRIGRGQRQHFGRLF*RIPLDH
Trigger: ATGGTCTAAGGGGATTCTTCAGAATAAACGACCAAA...GTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATTACCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp AATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACAGAAATAATTCCTTGCACATGTaGGTAGAGCCACTTCCCACT +
Preference number: 4 (lower is better)
Translates to: NPPSHNKRIGRGQRQHRNNSLHM*VEPLPT
Trigger: AGTGGGAAGTGGCTCTACTCACATGTGCAAGGAATT...ATTTCTGTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp AATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACAGAAATAGGTTATGCCCCAGTTaGTGTGCCATTCTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: NPPSHNKRIGRGQRQHRNRLCPS*CAILFA
Trigger: TGCAAACAGAATGGCACATCAACTGGGGCATAACCT...ATTTCTGTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR GCA 90 bp CAGGGTAATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACATGCCCCAGTTGATGTaGCATTCTGTTTGCAATTAT +
Preference number: 4 (lower is better)
Translates to: QGNPPSHNKRIGRGQRQHMPQLM*HSVCNY
Trigger: ATAATTGCAAACAGAATGGCACATCAACTGGGGCAT...GTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATTACCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR GCA 90 bp AATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACAGAAATAAAGCTCCCCTCCAGTaGAGTAGATCTTTCCACATC +
Preference number: 4 (lower is better)
Translates to: NPPSHNKRIGRGQRQHRNKAPLQ*SRSFHI
Trigger: GATGTGGAAAGATCTACTGCACTGGAGGGGAGCTTT...ATTTCTGTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR GCA 90 bp AATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACAGAAATCCACAGGATTTTCATTaGACTGAGAGGGGCAATTGG +
Preference number: 4 (lower is better)
Translates to: NPPSHNKRIGRGQRQHRNPQDFH*TERGNW
Trigger: CCAATTGCCCCTCTCAGTGCAATGAAAATCCTGTGG...ATTTCTGTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp TTCACTTTTAATTACCTAGAATCCGTGCCGCTCTGCCCTGCCTTCTTTGGCATTCATCACGCATTTTCCTaGAGGACAGGTGCATGGGAA +
Preference number: 4 (lower is better)
Translates to: FTFNYLESVPLCPAFFGIHHAFS*RTGAWE
Trigger: TTCCCATGCACCTGTCCTTCAGGAAAATGCGTGATG...AATGCCAAAGAAGGCAGGGCAGAGCGGCACGGATTCTAGGTAATTAAAAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp GACAGCACAGAAATGGCACATTGTCAAATTGCACAGGACAAAGACCTTAGAAACGGATTAGTACACTCCTaGGCAGGGCCACAGTCACAC +
Preference number: 4 (lower is better)
Translates to: DSTEMAHCQIAQDKDLRNGLVHS*AGPQSH
Trigger: GTGTGACTGTGGCCCTGCTCAGGAGTGTACTAATCC...GTTTCTAAGGTCTTTGTCCTGTGCAATTTGACAATGTGCCATTTCTGTGCTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp AATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACAGAAATTCTGTAGGTGGGCTCTaGACTTGCTTCAACTTGATA +
Preference number: 4 (lower is better)
Translates to: NPPSHNKRIGRGQRQHRNSVGGL*TCFNLI
Trigger: TATCAAGTTGAAGCAAGTTCAGAGCCCACCTACAGA...ATTTCTGTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR GCA 90 bp AATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACAGAAATGGCTCAGTCCTTATCTaGTGCTCATCACCAAAGTAT +
Preference number: 4 (lower is better)
Translates to: NPPSHNKRIGRGQRQHRNGSVLI*CSSPKY
Trigger: ATACTTTGGTGATGAGCAGCAGATAAGGACTGAGCC...ATTTCTGTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CCA 90 bp AATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACAGAAATAGTATGTCATCATCATaGGTGTGTCCAGTATCTCGC +
Preference number: 4 (lower is better)
Translates to: NPPSHNKRIGRGQRQHRNSMSSS*VCPVSR
Trigger: GCGAGATACTGGACACACCCATGATGATGACATACT...ATTTCTGTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CCA 90 bp AATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACAGAAATAGCCTAGGAACTCCCTaGATCTTAGAAGATGAAGGA +
Preference number: 4 (lower is better)
Translates to: NPPSHNKRIGRGQRQHRNSLGTP*ILEDEG
Trigger: TCCTTCATCTTCTAAGATCCAGGGAGTTCCTAGGCT...ATTTCTGTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CCA 90 bp ACCTTAGAAACCCTTCATAGGAGTTGTGAGTATGTCCTCTCACTTGGAGTAAATTCCTCACAGTGGCACTaGAGTCCGTGGCCATCCACA +
Preference number: 4 (lower is better)
Translates to: TLETLHRSCEYVLSLGVNSSQWH*SPWPST
Trigger: TGTGGATGGCCACGGACTCCAGTGCCACTGTGAGGA...ATTTACTCCAAGTGAGAGGACATACTCACAACTCCTATGAAGGGTTTCTAAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CCA 90 bp AATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACAGAAATACTTGGCACTTTGATTaGGATCTGCGATTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: NPPSHNKRIGRGQRQHRNTWHFD*DLRFLL
Trigger: CAAGAGGAATCGCAGATCCCAATCAAAGTGCCAAGT...ATTTCTGTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp GACAGCACAGAAATGGCACATTGTCAAATTGCACAGGACAAAGACCTTAGAAACACCCGGGAAGCATTCTaGGTGATTCTGGTAGAGGAG +
Preference number: 4 (lower is better)
Translates to: DSTEMAHCQIAQDKDLRNTREAF*VILVEE
Trigger: CTCCTCTACCAGAATCACTCAGAATGCTTCCCGGGT...GTTTCTAAGGTCTTTGTCCTGTGCAATTTGACAATGTGCCATTTCTGTGCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp AATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACAGAAATTGTGTAAGAAGCAGCTaGAATCATTCCCAGGGTAAT +
Preference number: 4 (lower is better)
Translates to: NPPSHNKRIGRGQRQHRNCVRSS*NHSQGN
Trigger: ATTACCCTGGGAATGATTTCAGCTGCTTCTTACACA...ATTTCTGTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR GCA 90 bp ACCTTAGAAACCCTTCATAGGAGTTGTGAGTATGTCCTCTCACTTGGAGTAAATGGGAACTCGTCATGCTaGATCCCAAGGTTATGCCCC +
Preference number: 4 (lower is better)
Translates to: TLETLHRSCEYVLSLGVNGNSSC*IPRLCP
Trigger: GGGGCATAACCTTGGGATGCAGCATGACGAGTTCCC...ATTTACTCCAAGTGAGAGGACATACTCACAACTCCTATGAAGGGTTTCTAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR GCA 90 bp AATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACAGAAATCAGTACACATGTGTGTaGATCACAGCAAGGATTAGT +
Preference number: 4 (lower is better)
Translates to: NPPSHNKRIGRGQRQHRNQYTCV*ITARIS
Trigger: ACTAATCCTTGCTGTGATGCACACACATGTGTACTG...ATTTCTGTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR GCA 90 bp GCCTTCTTTGGCATTTCTGCAGGACTTTCATTTAAACCAGAATTAGTGCTAATGCGTGCCGCTCTGCCCTaGCTTCTTTGGCATTTCTGC +
Preference number: 4 (lower is better)
Translates to: AFFGISAGLSFKPELVLMRAALP*LLWHFC
Trigger: GCAGAAATGCCAAAGAAGGCAGGGCAGAGCGGCACG...CATTAGCACTAATTCTGGTTTAAATGAAAGTCCTGCAGAAATGCCAAAGAAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CCA 90 bp AATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACAGAAATTCCTTCAAGTACTGGTaGTATTGGTTTTGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: NPPSHNKRIGRGQRQHRNSFKYW*YWFWLH
Trigger: ATGCAGCCAAAACCAATACCACCAGTACTTGAAGGA...ATTTCTGTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CCA 90 bp GACAGCACAGAAATGGCACATTGTCAAATTGCACAGGACAAAGACCTTAGAAACTGGCACTGGAGTCCGTaGCCATCCACAGGATTTTCA +
Preference number: 4 (lower is better)
Translates to: DSTEMAHCQIAQDKDLRNWHWSP*PSTGFS
Trigger: TGAAAATCCTGTGGATGGCCACGGACTCCAGTGCCA...GTTTCTAAGGTCTTTGTCCTGTGCAATTTGACAATGTGCCATTTCTGTGCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CCA 90 bp GCCTTCTTTGGCATTTCTGCAGGACTTTCATTTAAACCAGAATTAGTGCTAATGTCCTCACAGTGGCACTaGAGTCCGTGGCCATCCACA +
Preference number: 4 (lower is better)
Translates to: AFFGISAGLSFKPELVLMSSQWH*SPWPST
Trigger: TGTGGATGGCCACGGACTCCAGTGCCACTGTGAGGA...CATTAGCACTAATTCTGGTTTAAATGAAAGTCCTGCAGAAATGCCAAAGAAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CCA 90 bp TTCACTTTTAATTACCTAGAATCCGTGCCGCTCTGCCCTGCCTTCTTTGGCATTCAGGGTTTCTGTAGGTaGGCTCTGAACTTGCTTCAA +
Preference number: 4 (lower is better)
Translates to: FTFNYLESVPLCPAFFGIQGFCR*ALNLLQ
Trigger: TTGAAGCAAGTTCAGAGCCCACCTACAGAAACCCTG...AATGCCAAAGAAGGCAGGGCAGAGCGGCACGGATTCTAGGTAATTAAAAGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp TTCACTTTTAATTACCTAGAATCCGTGCCGCTCTGCCCTGCCTTCTTTGGCATTGAGAGCAGAAGTGCTTaGGAAAAGGAGTTCACCTTT +
Preference number: 4 (lower is better)
Translates to: FTFNYLESVPLCPAFFGIESRSA*EKEFTF
Trigger: AAAGGTGAACTCCTTTTCTCAAGCACTTCTGCTCTC...AATGCCAAAGAAGGCAGGGCAGAGCGGCACGGATTCTAGGTAATTAAAAGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000175238.10
CDS-3UTR TCA 90 bp ACCTTAGAAACCCTTCATAGGAGTTGTGAGTATGTCCTCTCACTTGGAGTAAATACCCGGGAAGCATTCTaGGTGATTCTGGTAGAGGAG +
Preference number: 4 (lower is better)
Translates to: TLETLHRSCEYVLSLGVNTREAF*VILVEE
Trigger: CTCCTCTACCAGAATCACTCAGAATGCTTCCCGGGT...ATTTACTCCAAGTGAGAGGACATACTCACAACTCCTATGAAGGGTTTCTAAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp CAACCAAGTAGCTTACAGACTAACATCCACTGGGAATTTAAGGGGATATGGATTGGACGAACCAGTTGTTaGCCCTCTACTCCAAGGATG +
Preference number: 4 (lower is better)
Translates to: QPSSLQTNIHWEFKGIWIGRTSC*PSTPRM
Trigger: CATCCTTGGAGTAGAGGGTCAACAACTGGTTCGTCC...AATCCATATCCCCTTAAATTCCCAGTGGATGTTAGTCTGTAAGCTACTTGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441335.6
CDS-3UTR TCA 90 bp AATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACAGAAATATGTTCTCCCTCATCTaGGTATTTCACTGGTTCAAT +
Preference number: 4 (lower is better)
Translates to: NPPSHNKRIGRGQRQHRNMFSLI*VFHWFN
Trigger: ATTGAACCAGTGAAATACTCAGATGAGGGAGAACAT...ATTTCTGTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp AATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACAGAAATAAGGAAATGGAATGTTaGGCATGCATGTTGGCTTAT +
Preference number: 4 (lower is better)
Translates to: NPPSHNKRIGRGQRQHRNKEMEC*ACMLAY
Trigger: ATAAGCCAACATGCATGCTCAACATTCCATTTCCTT...ATTTCTGTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp GACAGCACAGAAATGGCACATTGTCAAATTGCACAGGACAAAGACCTTAGAAACGATGTAGTGGGGACTTaGAAAACTAGTGGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: DSTEMAHCQIAQDKDLRNDVVGT*KTSGQA
Trigger: AGCCTGCCCACTAGTTTTTCAAGTCCCCACTACATC...GTTTCTAAGGTCTTTGTCCTGTGCAATTTGACAATGTGCCATTTCTGTGCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380789.5
CDS-3UTR TCA 90 bp TTCACTTTTAATTACCTAGAATCCGTGCCGCTCTGCCCTGCCTTCTTTGGCATTTTGCAGGTTTCAGTGTaGTGTAGTGGGGACTTGAAA +
Preference number: 4 (lower is better)
Translates to: FTFNYLESVPLCPAFFGILQVSV*CSGDLK
Trigger: TTTCAAGTCCCCACTACATCACACTGAAACCTGCAA...AATGCCAAAGAAGGCAGGGCAGAGCGGCACGGATTCTAGGTAATTAAAAGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380789.5
CDS-3UTR GCA 90 bp AATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACAGAAATATGCCCCAGTTGATGTaGCATTCTGTTTGCAATTAT +
Preference number: 4 (lower is better)
Translates to: NPPSHNKRIGRGQRQHRNMPQLM*HSVCNY
Trigger: ATAATTGCAAACAGAATGGCACATCAACTGGGGCAT...ATTTCTGTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CCA 90 bp AATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACAGAAATAAGTACTGGTGGTATTaGTTTTGGCTGCATTTACTG +
Preference number: 4 (lower is better)
Translates to: NPPSHNKRIGRGQRQHRNKYWWY*FWLHLL
Trigger: CAGTAAATGCAGCCAAAACCAATACCACCAGTACTT...ATTTCTGTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CCA 90 bp AATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACAGAAATACTGAGAGGGGCAATTaGTTGAGATATAGACCTTTT +
Preference number: 4 (lower is better)
Translates to: NPPSHNKRIGRGQRQHRNTERGN*LRYRPF
Trigger: AAAAGGTCTATATCTCAACCAATTGCCCCTCTCAGT...ATTTCTGTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CCA 90 bp TTCACTTTTAATTACCTAGAATCCGTGCCGCTCTGCCCTGCCTTCTTTGGCATTACTTGGCACTTTGATTaGGATCTGCGATTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: FTFNYLESVPLCPAFFGITWHFD*DLRFLL
Trigger: CAAGAGGAATCGCAGATCCCAATCAAAGTGCCAAGT...AATGCCAAAGAAGGCAGGGCAGAGCGGCACGGATTCTAGGTAATTAAAAGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
3UTR CAA 72 bp AGGGCAGAGACAGCACAGAAATGGCACATTGTCAAATaGCACAGGACAAAGACCTTAGAAACCCTTCATAGG +
Preference number: 4 (lower is better)
Translates to: RAETAQKWHIVK*HRTKTLETLHR
Trigger: CCTATGAAGGGTTTCTAAGGTCTTTGTCCTGTGCAATTTGACAATGTGCCATTTCTGTGCTGTCTCTGCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp AATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACAGAAATATTTCACTGGTTCAATaGGGTATCTTTGGTCGTTTA +
Preference number: 4 (lower is better)
Translates to: NPPSHNKRIGRGQRQHRNISLVQ*GIFGRL
Trigger: TAAACGACCAAAGATACCTCATTGAACCAGTGAAAT...ATTTCTGTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp TTCACTTTTAATTACCTAGAATCCGTGCCGCTCTGCCCTGCCTTCTTTGGCATTCCCTCAGGTTATATTTaGACACCAAATGTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: FTFNYLESVPLCPAFFGIPSGYI*TPNVLP
Trigger: AGGGAGAACATTTGGTGTTCAAATATAACCTGAGGG...AATGCCAAAGAAGGCAGGGCAGAGCGGCACGGATTCTAGGTAATTAAAAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp AATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACAGAAATCTGAGTAATACAACATaGTCAAAATCCTTCCGTGTT +
Preference number: 4 (lower is better)
Translates to: NPPSHNKRIGRGQRQHRNLSNTT*SKSFRV
Trigger: AACACGGAAGGATTTTGATCATGTTGTATTACTCAG...ATTTCTGTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp GCCTTCTTTGGCATTTCTGCAGGACTTTCATTTAAACCAGAATTAGTGCTAATGTCCACATTTTGTTCCTaGCGCCACCAGGCCAATGTC +
Preference number: 4 (lower is better)
Translates to: AFFGISAGLSFKPELVLMSTFCS*RHQANV
Trigger: GACATTGGCCTGGTGGCGTCAGGAACAAAATGTGGA...CATTAGCACTAATTCTGGTTTAAATGAAAGTCCTGCAGAAATGCCAAAGAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp TTCACTTTTAATTACCTAGAATCCGTGCCGCTCTGCCCTGCCTTCTTTGGCATTAGAGGGGCAATTGGTTaGGATATAGACCTTTTCCAT +
Preference number: 4 (lower is better)
Translates to: FTFNYLESVPLCPAFFGIRGAIG*DIDLFH
Trigger: ATGGAAAAGGTCTATATCTCAACCAATTGCCCCTCT...AATGCCAAAGAAGGCAGGGCAGAGCGGCACGGATTCTAGGTAATTAAAAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp GACAGCACAGAAATGGCACATTGTCAAATTGCACAGGACAAAGACCTTAGAAACGGATTTTCATTGCACTaGGAGGGGCAATTGGTTGAG +
Preference number: 4 (lower is better)
Translates to: DSTEMAHCQIAQDKDLRNGFSLH*EGQLVE
Trigger: CTCAACCAATTGCCCCTCTCAGTGCAATGAAAATCC...GTTTCTAAGGTCTTTGTCCTGTGCAATTTGACAATGTGCCATTTCTGTGCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp AATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACAGAAATGAACTTGCTTCAACTTaGTACATTTTCGGTAACGAA +
Preference number: 4 (lower is better)
Translates to: NPPSHNKRIGRGQRQHRNELAST*YIFGNE
Trigger: TTCGTTACCGAAAATGTATCAAGTTGAAGCAAGTTC...ATTTCTGTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp GGACATACGAAGAAGAAAAACAACCAAGTAGCTTACAGACTAACATCCACTGGGCAAGGAAGTGTTCCTTaGGGGAGTTACACAACTTGC +
Preference number: 4 (lower is better)
Translates to: GHTKKKNNQVAYRLTSTGQGSVP*GSYTTC
Trigger: GCAAGTTGTGTAACTCCCTCAAGGAACACTTCCTTG...CCCAGTGGATGTTAGTCTGTAAGCTACTTGGTTGTTTTTCTTCTTCGTATGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441335.6
CDS-3UTR GCA 90 bp TTCACTTTTAATTACCTAGAATCCGTGCCGCTCTGCCCTGCCTTCTTTGGCATTGTGTCCATATTTCAATaGCAACCAACGTCACATGGA +
Preference number: 4 (lower is better)
Translates to: FTFNYLESVPLCPAFFGIVSIFQ*QPTSHG
Trigger: TCCATGTGACGTTGGTTGGCATTGAAATATGGACAC...AATGCCAAAGAAGGCAGGGCAGAGCGGCACGGATTCTAGGTAATTAAAAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR GCA 90 bp ACCTTAGAAACCCTTCATAGGAGTTGTGAGTATGTCCTCTCACTTGGAGTAAATCATGGGAACTCGTCATaGTGCATCCCAAGGTTATGC +
Preference number: 4 (lower is better)
Translates to: TLETLHRSCEYVLSLGVNHGNSS*CIPRLC
Trigger: GCATAACCTTGGGATGCAGCATGACGAGTTCCCATG...ATTTACTCCAAGTGAGAGGACATACTCACAACTCCTATGAAGGGTTTCTAAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR GCA 90 bp AATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACAGAAATTTTACTGAATTTCAGTaGAGGAATGCTTCCATCACT +
Preference number: 4 (lower is better)
Translates to: NPPSHNKRIGRGQRQHRNFTEFQ*RNASIT
Trigger: AGTGATGGAAGCATTCCTGCACTGAAATTCAGTAAA...ATTTCTGTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR GCA 90 bp GCCTTCTTTGGCATTTCTGCAGGACTTTCATTTAAACCAGAATTAGTGCTAATGCAGGCGAGTGGCCAGTaGACATCTCAGGAAAATCAC +
Preference number: 4 (lower is better)
Translates to: AFFGISAGLSFKPELVLMQASGQ*TSQENH
Trigger: GTGATTTTCCTGAGATGTGCACTGGCCACTCGCCTG...CATTAGCACTAATTCTGGTTTAAATGAAAGTCCTGCAGAAATGCCAAAGAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR GCA 90 bp TTCACTTTTAATTACCTAGAATCCGTGCCGCTCTGCCCTGCCTTCTTTGGCATTTCAGTCCTTATCTGCTaGTCATCACCAAAGTATCCT +
Preference number: 4 (lower is better)
Translates to: FTFNYLESVPLCPAFFGISVLIC*SSPKYP
Trigger: AGGATACTTTGGTGATGAGCAGCAGATAAGGACTGA...AATGCCAAAGAAGGCAGGGCAGAGCGGCACGGATTCTAGGTAATTAAAAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR GCA 90 bp GTCAGACACTATACAAATCATGGACATACGAAGAAGAAAAACAACCAAGTAGCTCCTCCTCACTTCCACTaGAGGGATGAAGCACCTCAC +
Preference number: 4 (lower is better)
Translates to: VRHYTNHGHTKKKNNQVAPPHFH*RDEAPH
Trigger: GTGAGGTGCTTCATCCCTGCAGTGGAAGTGAGGAGG...AGCTACTTGGTTGTTTTTCTTCTTCGTATGTCCATGATTTGTATAGTGTCTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441335.6
CDS-3UTR CCA 90 bp GACAGCACAGAAATGGCACATTGTCAAATTGCACAGGACAAAGACCTTAGAAACCAGGCACATACCCCCTaGATAAGAAATTCCTTGCAC +
Preference number: 4 (lower is better)
Translates to: DSTEMAHCQIAQDKDLRNQAHTP*IRNSLH
Trigger: GTGCAAGGAATTTCTTATCCAGGGGGTATGTGCCTG...GTTTCTAAGGTCTTTGTCCTGTGCAATTTGACAATGTGCCATTTCTGTGCTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CCA 90 bp AATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACAGAAATTGGTGGTATTGGTTTTaGCTGCATTTACTGAATTTC +
Preference number: 4 (lower is better)
Translates to: NPPSHNKRIGRGQRQHRNWWYWF*LHLLNF
Trigger: GAAATTCAGTAAATGCAGCCAAAACCAATACCACCA...ATTTCTGTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CCA 90 bp GCCTTCTTTGGCATTTCTGCAGGACTTTCATTTAAACCAGAATTAGTGCTAATGTGGCACTGGAGTCCGTaGCCATCCACAGGATTTTCA +
Preference number: 4 (lower is better)
Translates to: AFFGISAGLSFKPELVLMWHWSP*PSTGFS
Trigger: TGAAAATCCTGTGGATGGCCACGGACTCCAGTGCCA...CATTAGCACTAATTCTGGTTTAAATGAAAGTCCTGCAGAAATGCCAAAGAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CCA 90 bp GACAGCACAGAAATGGCACATTGTCAAATTGCACAGGACAAAGACCTTAGAAACCAGGGTTTCTGTAGGTaGGCTCTGAACTTGCTTCAA +
Preference number: 4 (lower is better)
Translates to: DSTEMAHCQIAQDKDLRNQGFCR*ALNLLQ
Trigger: TTGAAGCAAGTTCAGAGCCCACCTACAGAAACCCTG...GTTTCTAAGGTCTTTGTCCTGTGCAATTTGACAATGTGCCATTTCTGTGCTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CCA 90 bp TTCACTTTTAATTACCTAGAATCCGTGCCGCTCTGCCCTGCCTTCTTTGGCATTAACTTCAAGCTCACTTaGCACTTTGATTGGGATCTG +
Preference number: 4 (lower is better)
Translates to: FTFNYLESVPLCPAFFGINFKLT*HFDWDL
Trigger: CAGATCCCAATCAAAGTGCCAAGTGAGCTTGAAGTT...AATGCCAAAGAAGGCAGGGCAGAGCGGCACGGATTCTAGGTAATTAAAAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp AGGCATACAGTATGTGTCAGACACTATACAAATCATGGACATACGAAGAAGAAAACCCGGGAAGCATTCTaGGTGATTCTGGTAGAGGAG +
Preference number: 4 (lower is better)
Translates to: RHTVCVRHYTNHGHTKKKTREAF*VILVEE
Trigger: CTCCTCTACCAGAATCACTCAGAATGCTTCCCGGGT...TTTCTTCTTCGTATGTCCATGATTTGTATAGTGTCTGACACATACTGTATGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441335.6
CDS-3UTR TCA 90 bp TTCACTTTTAATTACCTAGAATCCGTGCCGCTCTGCCCTGCCTTCTTTGGCATTACTGATACTGGCAGCTaGATCATATTCGTGTACTAT +
Preference number: 4 (lower is better)
Translates to: FTFNYLESVPLCPAFFGITDTGS*IIFVYY
Trigger: ATAGTACACGAATATGATTCAGCTGCCAGTATCAGT...AATGCCAAAGAAGGCAGGGCAGAGCGGCACGGATTCTAGGTAATTAAAAGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp TTCACTTTTAATTACCTAGAATCCGTGCCGCTCTGCCCTGCCTTCTTTGGCATTATGTTCTCCCTCATCTaGGTATTTCACTGGTTCAAT +
Preference number: 4 (lower is better)
Translates to: FTFNYLESVPLCPAFFGIMFSLI*VFHWFN
Trigger: ATTGAACCAGTGAAATACTCAGATGAGGGAGAACAT...AATGCCAAAGAAGGCAGGGCAGAGCGGCACGGATTCTAGGTAATTAAAAGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp ACCTTAGAAACCCTTCATAGGAGTTGTGAGTATGTCCTCTCACTTGGAGTAAATAATTCCTTGCACATGTaGGTAGAGCCACTTCCCACT +
Preference number: 4 (lower is better)
Translates to: TLETLHRSCEYVLSLGVNNSLHM*VEPLPT
Trigger: AGTGGGAAGTGGCTCTACTCACATGTGCAAGGAATT...ATTTACTCCAAGTGAGAGGACATACTCACAACTCCTATGAAGGGTTTCTAAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp GACAGCACAGAAATGGCACATTGTCAAATTGCACAGGACAAAGACCTTAGAAACTTGGACATTTCCCCATaGAACAGTAGCCTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: DSTEMAHCQIAQDKDLRNLDISP*NSSLLS
Trigger: ACTCAGAAGGCTACTGTTTCATGGGGAAATGTCCAA...GTTTCTAAGGTCTTTGTCCTGTGCAATTTGACAATGTGCCATTTCTGTGCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp GACAGCACAGAAATGGCACATTGTCAAATTGCACAGGACAAAGACCTTAGAAACAGATCTTTCCACATCTaGCATCTTTCTCCTCACAGG +
Preference number: 4 (lower is better)
Translates to: DSTEMAHCQIAQDKDLRNRSFHI*HLSPHR
Trigger: CCTGTGAGGAGAAAGATGTCAGATGTGGAAAGATCT...GTTTCTAAGGTCTTTGTCCTGTGCAATTTGACAATGTGCCATTTCTGTGCTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp TTCACTTTTAATTACCTAGAATCCGTGCCGCTCTGCCCTGCCTTCTTTGGCATTGGTTTATTTAGGAAATaGATTTCTGGCAGGATTGGC +
Preference number: 4 (lower is better)
Translates to: FTFNYLESVPLCPAFFGIGLFRK*ISGRIG
Trigger: GCCAATCCTGCCAGAAATTCATTTCCTAAATAAACC...AATGCCAAAGAAGGCAGGGCAGAGCGGCACGGATTCTAGGTAATTAAAAGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000175238.10
CDS-3UTR TCA 90 bp GCCTTCTTTGGCATTTCTGCAGGACTTTCATTTAAACCAGAATTAGTGCTAATGGCTCACTTGGCACTTTaGTTGGGATCTGCGATTCCT +
Preference number: 4 (lower is better)
Translates to: AFFGISAGLSFKPELVLMAHLAL*LGSAIP
Trigger: AGGAATCGCAGATCCCAATCAAAGTGCCAAGTGAGC...CATTAGCACTAATTCTGGTTTAAATGAAAGTCCTGCAGAAATGCCAAAGAAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp TTCACTTTTAATTACCTAGAATCCGTGCCGCTCTGCCCTGCCTTCTTTGGCATTATTCTTGTAACCCTCTaGTTTCTCTGTCAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: FTFNYLESVPLCPAFFGIILVTL*FLCQLL
Trigger: AAGAAGCTGACAGAGAAATCAGAGGGTTACAAGAAT...AATGCCAAAGAAGGCAGGGCAGAGCGGCACGGATTCTAGGTAATTAAAAGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp GTCAGACACTATACAAATCATGGACATACGAAGAAGAAAAACAACCAAGTAGCTCTTCCACTGCAGGGATaGAGCACCTCACAGATAGGT +
Preference number: 4 (lower is better)
Translates to: VRHYTNHGHTKKKNNQVALPLQG*STSQIG
Trigger: ACCTATCTGTGAGGTGCTTCATCCCTGCAGTGGAAG...AGCTACTTGGTTGTTTTTCTTCTTCGTATGTCCATGATTTGTATAGTGTCTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441335.6
CDS-3UTR GCA 90 bp GCCTTCTTTGGCATTTCTGCAGGACTTTCATTTAAACCAGAATTAGTGCTAATGTTCCTGAAGGACAGGTaGATGGGAACTCGTCATGCT +
Preference number: 4 (lower is better)
Translates to: AFFGISAGLSFKPELVLMFLKDR*MGTRHA
Trigger: AGCATGACGAGTTCCCATGCACCTGTCCTTCAGGAA...CATTAGCACTAATTCTGGTTTAAATGAAAGTCCTGCAGAAATGCCAAAGAAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR GCA 90 bp ACCTTAGAAACCCTTCATAGGAGTTGTGAGTATGTCCTCTCACTTGGAGTAAATAAAGCTCCCCTCCAGTaGAGTAGATCTTTCCACATC +
Preference number: 4 (lower is better)
Translates to: TLETLHRSCEYVLSLGVNKAPLQ*SRSFHI
Trigger: GATGTGGAAAGATCTACTGCACTGGAGGGGAGCTTT...ATTTACTCCAAGTGAGAGGACATACTCACAACTCCTATGAAGGGTTTCTAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CCA 90 bp GACAGCACAGAAATGGCACATTGTCAAATTGCACAGGACAAAGACCTTAGAAACAGTATGTCATCATCATaGGTGTGTCCAGTATCTCGC +
Preference number: 4 (lower is better)
Translates to: DSTEMAHCQIAQDKDLRNSMSSS*VCPVSR
Trigger: GCGAGATACTGGACACACCCATGATGATGACATACT...GTTTCTAAGGTCTTTGTCCTGTGCAATTTGACAATGTGCCATTTCTGTGCTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CCA 90 bp AATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACAGAAATAGATTCATTATCCCCTaGAACAGTTTTTCTGGTAAA +
Preference number: 4 (lower is better)
Translates to: NPPSHNKRIGRGQRQHRNRFIIP*NSFSGK
Trigger: TTTACCAGAAAAACTGTTCCAGGGGATAATGAATCT...ATTTCTGTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CCA 90 bp GACAGCACAGAAATGGCACATTGTCAAATTGCACAGGACAAAGACCTTAGAAACCTGATCCTCACGAGTTaGACATTTCCCCATGAAACA +
Preference number: 4 (lower is better)
Translates to: DSTEMAHCQIAQDKDLRNLILTS*TFPHET
Trigger: TGTTTCATGGGGAAATGTCCAACTCGTGAGGATCAG...GTTTCTAAGGTCTTTGTCCTGTGCAATTTGACAATGTGCCATTTCTGTGCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CCA 90 bp TTCACTTTTAATTACCTAGAATCCGTGCCGCTCTGCCCTGCCTTCTTTGGCATTACTGAGAGGGGCAATTaGTTGAGATATAGACCTTTT +
Preference number: 4 (lower is better)
Translates to: FTFNYLESVPLCPAFFGITERGN*LRYRPF
Trigger: AAAAGGTCTATATCTCAACCAATTGCCCCTCTCAGT...AATGCCAAAGAAGGCAGGGCAGAGCGGCACGGATTCTAGGTAATTAAAAGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp TTCACTTTTAATTACCTAGAATCCGTGCCGCTCTGCCCTGCCTTCTTTGGCATTCTGGATCTTAGAAGATaGAGGACTAAGGTTTTTCTA +
Preference number: 4 (lower is better)
Translates to: FTFNYLESVPLCPAFFGILDLRR*RTKVFL
Trigger: TAGAAAAACCTTAGTCCTTCATCTTCTAAGATCCAG...AATGCCAAAGAAGGCAGGGCAGAGCGGCACGGATTCTAGGTAATTAAAAGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp TTCACTTTTAATTACCTAGAATCCGTGCCGCTCTGCCCTGCCTTCTTTGGCATTCTGAGTAATACAACATaGTCAAAATCCTTCCGTGTT +
Preference number: 4 (lower is better)
Translates to: FTFNYLESVPLCPAFFGILSNTT*SKSFRV
Trigger: AACACGGAAGGATTTTGATCATGTTGTATTACTCAG...AATGCCAAAGAAGGCAGGGCAGAGCGGCACGGATTCTAGGTAATTAAAAGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp ACCTTAGAAACCCTTCATAGGAGTTGTGAGTATGTCCTCTCACTTGGAGTAAATTTGGACATTTCCCCATaGAACAGTAGCCTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: TLETLHRSCEYVLSLGVNLDISP*NSSLLS
Trigger: ACTCAGAAGGCTACTGTTTCATGGGGAAATGTCCAA...ATTTACTCCAAGTGAGAGGACATACTCACAACTCCTATGAAGGGTTTCTAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CCA 90 bp GCCTTCTTTGGCATTTCTGCAGGACTTTCATTTAAACCAGAATTAGTGCTAATGCAGGCACATACCCCCTaGATAAGAAATTCCTTGCAC +
Preference number: 4 (lower is better)
Translates to: AFFGISAGLSFKPELVLMQAHTP*IRNSLH
Trigger: GTGCAAGGAATTTCTTATCCAGGGGGTATGTGCCTG...CATTAGCACTAATTCTGGTTTAAATGAAAGTCCTGCAGAAATGCCAAAGAAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CCA 90 bp GACAGCACAGAAATGGCACATTGTCAAATTGCACAGGACAAAGACCTTAGAAACTCCTTCAAGTACTGGTaGTATTGGTTTTGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: DSTEMAHCQIAQDKDLRNSFKYW*YWFWLH
Trigger: ATGCAGCCAAAACCAATACCACCAGTACTTGAAGGA...GTTTCTAAGGTCTTTGTCCTGTGCAATTTGACAATGTGCCATTTCTGTGCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CCA 90 bp GACAGCACAGAAATGGCACATTGTCAAATTGCACAGGACAAAGACCTTAGAAACTGCACAAGTAAATCCTaGCTTCAGTACACATGTGTG +
Preference number: 4 (lower is better)
Translates to: DSTEMAHCQIAQDKDLRNCTSKS*LQYTCV
Trigger: CACACATGTGTACTGAAGCCAGGATTTACTTGTGCA...GTTTCTAAGGTCTTTGTCCTGTGCAATTTGACAATGTGCCATTTCTGTGCTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CCA 90 bp ACCTTAGAAACCCTTCATAGGAGTTGTGAGTATGTCCTCTCACTTGGAGTAAATAATTTCTGGCAGGATTaGCTCAGTCCTTATCTGCTG +
Preference number: 4 (lower is better)
Translates to: TLETLHRSCEYVLSLGVNNFWQD*LSPYLL
Trigger: CAGCAGATAAGGACTGAGCCAATCCTGCCAGAAATT...ATTTACTCCAAGTGAGAGGACATACTCACAACTCCTATGAAGGGTTTCTAAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp CATGGACATACGAAGAAGAAAAACAACCAAGTAGCTTACAGACTAACATCCACTGAGAGCAGAAGTGCTTaGGAAAAGGAGTTCACCTTT +
Preference number: 4 (lower is better)
Translates to: HGHTKKKNNQVAYRLTSTESRSA*EKEFTF
Trigger: AAAGGTGAACTCCTTTTCTCAAGCACTTCTGCTCTC...AGTGGATGTTAGTCTGTAAGCTACTTGGTTGTTTTTCTTCTTCGTATGTCCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441335.6
CDS-3UTR TCA 90 bp GCCTTCTTTGGCATTTCTGCAGGACTTTCATTTAAACCAGAATTAGTGCTAATGGACCATTACACGTACTaGTACTGGCAGCTGAATCAT +
Preference number: 4 (lower is better)
Translates to: AFFGISAGLSFKPELVLMDHYTY*YWQLNH
Trigger: ATGATTCAGCTGCCAGTATCAGTACGTGTAATGGTC...CATTAGCACTAATTCTGGTTTAAATGAAAGTCCTGCAGAAATGCCAAAGAAGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp GACAGCACAGAAATGGCACATTGTCAAATTGCACAGGACAAAGACCTTAGAAACTTTGGTCGTTTATTCTaGAGAATCCCCTTAGACCAT +
Preference number: 4 (lower is better)
Translates to: DSTEMAHCQIAQDKDLRNFGRLF*RIPLDH
Trigger: ATGGTCTAAGGGGATTCTTCAGAATAAACGACCAAA...GTTTCTAAGGTCTTTGTCCTGTGCAATTTGACAATGTGCCATTTCTGTGCTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp ACCTTAGAAACCCTTCATAGGAGTTGTGAGTATGTCCTCTCACTTGGAGTAAATAGAGCCACTTCCCACTaGGTAATACAACATGATCAA +
Preference number: 4 (lower is better)
Translates to: TLETLHRSCEYVLSLGVNRATSH*VIQHDQ
Trigger: TTGATCATGTTGTATTACTCAGTGGGAAGTGGCTCT...ATTTACTCCAAGTGAGAGGACATACTCACAACTCCTATGAAGGGTTTCTAAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp GCCTTCTTTGGCATTTCTGCAGGACTTTCATTTAAACCAGAATTAGTGCTAATGAATAGTTCAGAGCACTaGTCCTCACGAGTTGGACAT +
Preference number: 4 (lower is better)
Translates to: AFFGISAGLSFKPELVLMNSSEH*SSRVGH
Trigger: ATGTCCAACTCGTGAGGATCAGTGCTCTGAACTATT...CATTAGCACTAATTCTGGTTTAAATGAAAGTCCTGCAGAAATGCCAAAGAAGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp ACCTTAGAAACCCTTCATAGGAGTTGTGAGTATGTCCTCTCACTTGGAGTAAATAGAGGGGCAATTGGTTaGGATATAGACCTTTTCCAT +
Preference number: 4 (lower is better)
Translates to: TLETLHRSCEYVLSLGVNRGAIG*DIDLFH
Trigger: ATGGAAAAGGTCTATATCTCAACCAATTGCCCCTCT...ATTTACTCCAAGTGAGAGGACATACTCACAACTCCTATGAAGGGTTTCTAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp GACAGCACAGAAATGGCACATTGTCAAATTGCACAGGACAAAGACCTTAGAAACATCTGCGATTCCTCTTaGATCTTTACTTGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: DSTEMAHCQIAQDKDLRNICDSS*IFTCRF
Trigger: AAACCTGCAAGTAAAGATTCAAGAGGAATCGCAGAT...GTTTCTAAGGTCTTTGTCCTGTGCAATTTGACAATGTGCCATTTCTGTGCTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp GACAGCACAGAAATGGCACATTGTCAAATTGCACAGGACAAAGACCTTAGAAACATTCTTGTAACCCTCTaGTTTCTCTGTCAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: DSTEMAHCQIAQDKDLRNILVTL*FLCQLL
Trigger: AAGAAGCTGACAGAGAAATCAGAGGGTTACAAGAAT...GTTTCTAAGGTCTTTGTCCTGTGCAATTTGACAATGTGCCATTTCTGTGCTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR GCA 90 bp GCCTTCTTTGGCATTTCTGCAGGACTTTCATTTAAACCAGAATTAGTGCTAATGAGAGGAGAGCAGAAGTaGTTGAGAAAAGGAGTTCAC +
Preference number: 4 (lower is better)
Translates to: AFFGISAGLSFKPELVLMRGEQK*LRKGVH
Trigger: GTGAACTCCTTTTCTCAAGCACTTCTGCTCTCCTCT...CATTAGCACTAATTCTGGTTTAAATGAAAGTCCTGCAGAAATGCCAAAGAAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000175238.10
CDS-3UTR GCA 90 bp ACCTTAGAAACCCTTCATAGGAGTTGTGAGTATGTCCTCTCACTTGGAGTAAATACAGCATTCTCCTTCTaGACAAGTAAATCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: TLETLHRSCEYVLSLGVNTAFSF*TSKSWL
Trigger: AAGCCAGGATTTACTTGTGCAGAAGGAGAATGCTGT...ATTTACTCCAAGTGAGAGGACATACTCACAACTCCTATGAAGGGTTTCTAAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CCA 90 bp CATGGACATACGAAGAAGAAAAACAACCAAGTAGCTTACAGACTAACATCCACTAGTATGTCATCATCATaGGTGTGTCCAGTATCTCGC +
Preference number: 4 (lower is better)
Translates to: HGHTKKKNNQVAYRLTSTSMSSS*VCPVSR
Trigger: GCGAGATACTGGACACACCCATGATGATGACATACT...AGTGGATGTTAGTCTGTAAGCTACTTGGTTGTTTTTCTTCTTCGTATGTCCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441335.6
CDS-3UTR CCA 90 bp GCCTTCTTTGGCATTTCTGCAGGACTTTCATTTAAACCAGAATTAGTGCTAATGAGCCTAGGAACTCCCTaGATCTTAGAAGATGAAGGA +
Preference number: 4 (lower is better)
Translates to: AFFGISAGLSFKPELVLMSLGTP*ILEDEG
Trigger: TCCTTCATCTTCTAAGATCCAGGGAGTTCCTAGGCT...CATTAGCACTAATTCTGGTTTAAATGAAAGTCCTGCAGAAATGCCAAAGAAGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CCA 90 bp GCCTTCTTTGGCATTTCTGCAGGACTTTCATTTAAACCAGAATTAGTGCTAATGCTGATCCTCACGAGTTaGACATTTCCCCATGAAACA +
Preference number: 4 (lower is better)
Translates to: AFFGISAGLSFKPELVLMLILTS*TFPHET
Trigger: TGTTTCATGGGGAAATGTCCAACTCGTGAGGATCAG...CATTAGCACTAATTCTGGTTTAAATGAAAGTCCTGCAGAAATGCCAAAGAAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp ACCTTAGAAACCCTTCATAGGAGTTGTGAGTATGTCCTCTCACTTGGAGTAAATACTGATACTGGCAGCTaGATCATATTCGTGTACTAT +
Preference number: 4 (lower is better)
Translates to: TLETLHRSCEYVLSLGVNTDTGS*IIFVYY
Trigger: ATAGTACACGAATATGATTCAGCTGCCAGTATCAGT...ATTTACTCCAAGTGAGAGGACATACTCACAACTCCTATGAAGGGTTTCTAAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp CAACCAAGTAGCTTACAGACTAACATCCACTGGGAATTTAAGGGGATATGGATTACTGATACTGGCAGCTaGATCATATTCGTGTACTAT +
Preference number: 4 (lower is better)
Translates to: QPSSLQTNIHWEFKGIWITDTGS*IIFVYY
Trigger: ATAGTACACGAATATGATTCAGCTGCCAGTATCAGT...AATCCATATCCCCTTAAATTCCCAGTGGATGTTAGTCTGTAAGCTACTTGGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441335.6
CDS-3UTR TCA 90 bp AGGCATACAGTATGTGTCAGACACTATACAAATCATGGACATACGAAGAAGAAAGACCATTACACGTACTaGTACTGGCAGCTGAATCAT +
Preference number: 4 (lower is better)
Translates to: RHTVCVRHYTNHGHTKKKDHYTY*YWQLNH
Trigger: ATGATTCAGCTGCCAGTATCAGTACGTGTAATGGTC...TTTCTTCTTCGTATGTCCATGATTTGTATAGTGTCTGACACATACTGTATGCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441335.6
CDS-3UTR TCA 90 bp GCCTTCTTTGGCATTTCTGCAGGACTTTCATTTAAACCAGAATTAGTGCTAATGCCCTCAGGTTATATTTaGACACCAAATGTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: AFFGISAGLSFKPELVLMPSGYI*TPNVLP
Trigger: AGGGAGAACATTTGGTGTTCAAATATAACCTGAGGG...CATTAGCACTAATTCTGGTTTAAATGAAAGTCCTGCAGAAATGCCAAAGAAGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp ACCTTAGAAACCCTTCATAGGAGTTGTGAGTATGTCCTCTCACTTGGAGTAAATAAGGAAATGGAATGTTaGGCATGCATGTTGGCTTAT +
Preference number: 4 (lower is better)
Translates to: TLETLHRSCEYVLSLGVNKEMEC*ACMLAY
Trigger: ATAAGCCAACATGCATGCTCAACATTCCATTTCCTT...ATTTACTCCAAGTGAGAGGACATACTCACAACTCCTATGAAGGGTTTCTAAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp GCCTTCTTTGGCATTTCTGCAGGACTTTCATTTAAACCAGAATTAGTGCTAATGTGTGTAAGAAGCAGCTaGAATCATTCCCAGGGTAAT +
Preference number: 4 (lower is better)
Translates to: AFFGISAGLSFKPELVLMCVRSS*NHSQGN
Trigger: ATTACCCTGGGAATGATTTCAGCTGCTTCTTACACA...CATTAGCACTAATTCTGGTTTAAATGAAAGTCCTGCAGAAATGCCAAAGAAGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp GTCAGACACTATACAAATCATGGACATACGAAGAAGAAAAACAACCAAGTAGCTATAGGTGGGCAGTTTTaGTCCACAACAAGGAAGTGT +
Preference number: 4 (lower is better)
Translates to: VRHYTNHGHTKKKNNQVAIGGQF*STTRKC
Trigger: ACACTTCCTTGTTGTGGATCAAAACTGCCCACCTAT...AGCTACTTGGTTGTTTTTCTTCTTCGTATGTCCATGATTTGTATAGTGTCTGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441335.6
CDS-3UTR GCA 90 bp ATCAGGAAACATCCATTAGGCATACAGTATGTGTCAGACACTATACAAATCATGAGAGGAGAGCAGAAGTaGTTGAGAAAAGGAGTTCAC +
Preference number: 4 (lower is better)
Translates to: IRKHPLGIQYVSDTIQIMRGEQK*LRKGVH
Trigger: GTGAACTCCTTTTCTCAAGCACTTCTGCTCTCCTCT...CATGATTTGTATAGTGTCTGACACATACTGTATGCCTAATGGATGTTTCCTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441335.6
CDS-3UTR GCA 90 bp GCCTTCTTTGGCATTTCTGCAGGACTTTCATTTAAACCAGAATTAGTGCTAATGGAGGATGACCATTTCTaGGATACACAGTATCATCAG +
Preference number: 4 (lower is better)
Translates to: AFFGISAGLSFKPELVLMEDDHF*DTQYHQ
Trigger: CTGATGATACTGTGTATCGCAGAAATGGTCATCCTC...CATTAGCACTAATTCTGGTTTAAATGAAAGTCCTGCAGAAATGCCAAAGAAGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR GCA 90 bp GACAGCACAGAAATGGCACATTGTCAAATTGCACAGGACAAAGACCTTAGAAACTTTACTGAATTTCAGTaGAGGAATGCTTCCATCACT +
Preference number: 4 (lower is better)
Translates to: DSTEMAHCQIAQDKDLRNFTEFQ*RNASIT
Trigger: AGTGATGGAAGCATTCCTGCACTGAAATTCAGTAAA...GTTTCTAAGGTCTTTGTCCTGTGCAATTTGACAATGTGCCATTTCTGTGCTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR GCA 90 bp GCCTTCTTTGGCATTTCTGCAGGACTTTCATTTAAACCAGAATTAGTGCTAATGCAGTACACATGTGTGTaGATCACAGCAAGGATTAGT +
Preference number: 4 (lower is better)
Translates to: AFFGISAGLSFKPELVLMQYTCV*ITARIS
Trigger: ACTAATCCTTGCTGTGATGCACACACATGTGTACTG...CATTAGCACTAATTCTGGTTTAAATGAAAGTCCTGCAGAAATGCCAAAGAAGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CCA 90 bp CAGACACTATACAAATCATGGACATACGAAGAAGAAAAACAACCAAGTAGCTTACTGTACAGGAATAATTaGCACCATACGGCACCCTCA +
Preference number: 4 (lower is better)
Translates to: QTLYKSWTYEEEKQPSSLLYRNN*HHTAPS
Trigger: TGAGGGTGCCGTATGGTGCCAATTATTCCTGTACAG...TAAGCTACTTGGTTGTTTTTCTTCTTCGTATGTCCATGATTTGTATAGTGTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441335.6
CDS-3UTR CCA 90 bp CAGACACTATACAAATCATGGACATACGAAGAAGAAAAACAACCAAGTAGCTTACACCTCACAGATAGGTaGGCAGTTTTGATCCACAAC +
Preference number: 4 (lower is better)
Translates to: QTLYKSWTYEEEKQPSSLHLTDR*AVLIHN
Trigger: GTTGTGGATCAAAACTGCCCACCTATCTGTGAGGTG...TAAGCTACTTGGTTGTTTTTCTTCTTCGTATGTCCATGATTTGTATAGTGTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441335.6
CDS-3UTR TCA 90 bp ACCTTAGAAACCCTTCATAGGAGTTGTGAGTATGTCCTCTCACTTGGAGTAAATCTGGATCTTAGAAGATaGAGGACTAAGGTTTTTCTA +
Preference number: 4 (lower is better)
Translates to: TLETLHRSCEYVLSLGVNLDLRR*RTKVFL
Trigger: TAGAAAAACCTTAGTCCTTCATCTTCTAAGATCCAG...ATTTACTCCAAGTGAGAGGACATACTCACAACTCCTATGAAGGGTTTCTAAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp ACCTTAGAAACCCTTCATAGGAGTTGTGAGTATGTCCTCTCACTTGGAGTAAATATTTCACTGGTTCAATaGGGTATCTTTGGTCGTTTA +
Preference number: 4 (lower is better)
Translates to: TLETLHRSCEYVLSLGVNISLVQ*GIFGRL
Trigger: TAAACGACCAAAGATACCTCATTGAACCAGTGAAAT...ATTTACTCCAAGTGAGAGGACATACTCACAACTCCTATGAAGGGTTTCTAAGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp CAACCAAGTAGCTTACAGACTAACATCCACTGGGAATTTAAGGGGATATGGATTATTTCACTGGTTCAATaGGGTATCTTTGGTCGTTTA +
Preference number: 4 (lower is better)
Translates to: QPSSLQTNIHWEFKGIWIISLVQ*GIFGRL
Trigger: TAAACGACCAAAGATACCTCATTGAACCAGTGAAAT...AATCCATATCCCCTTAAATTCCCAGTGGATGTTAGTCTGTAAGCTACTTGGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441335.6
CDS-3UTR TCA 90 bp TGTATAGAAAAGCCTAAAGCTCCAAGGACTACTTTTATACAACCATCCCACCAAATGTTCTCCCTCATCTaGGTATTTCACTGGTTCAAT +
Preference number: 4 (lower is better)
Translates to: CIEKPKAPRTTFIQPSHQMFSLI*VFHWFN
Trigger: ATTGAACCAGTGAAATACTCAGATGAGGGAGAACAT...TTGGTGGGATGGTTGTATAAAAGTAGTCCTTGGAGCTTTAGGCTTTTCTATACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441335.6
CDS-3UTR TCA 90 bp AGGCATACAGTATGTGTCAGACACTATACAAATCATGGACATACGAAGAAGAAACCCTCAGGTTATATTTaGACACCAAATGTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: RHTVCVRHYTNHGHTKKKPSGYI*TPNVLP
Trigger: AGGGAGAACATTTGGTGTTCAAATATAACCTGAGGG...TTTCTTCTTCGTATGTCCATGATTTGTATAGTGTCTGACACATACTGTATGCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441335.6
CDS-3UTR TCA 90 bp ACCTTAGAAACCCTTCATAGGAGTTGTGAGTATGTCCTCTCACTTGGAGTAAATGTGCTAAAGAGCATTTaGAAGACCACAAGACATTTT +
Preference number: 4 (lower is better)
Translates to: TLETLHRSCEYVLSLGVNVLKSI*KTTRHF
Trigger: AAAATGTCTTGTGGTCTTTCAAATGCTCTTTAGCAC...ATTTACTCCAAGTGAGAGGACATACTCACAACTCCTATGAAGGGTTTCTAAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CCA 90 bp GACAGCACAGAAATGGCACATTGTCAAATTGCACAGGACAAAGACCTTAGAAACAGATTCATTATCCCCTaGAACAGTTTTTCTGGTAAA +
Preference number: 4 (lower is better)
Translates to: DSTEMAHCQIAQDKDLRNRFIIP*NSFSGK
Trigger: TTTACCAGAAAAACTGTTCCAGGGGATAATGAATCT...GTTTCTAAGGTCTTTGTCCTGTGCAATTTGACAATGTGCCATTTCTGTGCTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CCA 90 bp ACCTTAGAAACCCTTCATAGGAGTTGTGAGTATGTCCTCTCACTTGGAGTAAATTGGTGGTATTGGTTTTaGCTGCATTTACTGAATTTC +
Preference number: 4 (lower is better)
Translates to: TLETLHRSCEYVLSLGVNWWYWF*LHLLNF
Trigger: GAAATTCAGTAAATGCAGCCAAAACCAATACCACCA...ATTTACTCCAAGTGAGAGGACATACTCACAACTCCTATGAAGGGTTTCTAAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CCA 90 bp GCCTTCTTTGGCATTTCTGCAGGACTTTCATTTAAACCAGAATTAGTGCTAATGAAGTACTGGTGGTATTaGTTTTGGCTGCATTTACTG +
Preference number: 4 (lower is better)
Translates to: AFFGISAGLSFKPELVLMKYWWY*FWLHLL
Trigger: CAGTAAATGCAGCCAAAACCAATACCACCAGTACTT...CATTAGCACTAATTCTGGTTTAAATGAAAGTCCTGCAGAAATGCCAAAGAAGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CCA 90 bp ACCTTAGAAACCCTTCATAGGAGTTGTGAGTATGTCCTCTCACTTGGAGTAAATGTTGAGCATGCATGTTaGCTTATAATCCTTCAAGTA +
Preference number: 4 (lower is better)
Translates to: TLETLHRSCEYVLSLGVNVEHAC*LIILQV
Trigger: TACTTGAAGGATTATAAGCCAACATGCATGCTCAAC...ATTTACTCCAAGTGAGAGGACATACTCACAACTCCTATGAAGGGTTTCTAAGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp GCCTTCTTTGGCATTTCTGCAGGACTTTCATTTAAACCAGAATTAGTGCTAATGGAACTTGCTTCAACTTaGTACATTTTCGGTAACGAA +
Preference number: 4 (lower is better)
Translates to: AFFGISAGLSFKPELVLMELAST*YIFGNE
Trigger: TTCGTTACCGAAAATGTATCAAGTTGAAGCAAGTTC...CATTAGCACTAATTCTGGTTTAAATGAAAGTCCTGCAGAAATGCCAAAGAAGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp GCCTTCTTTGGCATTTCTGCAGGACTTTCATTTAAACCAGAATTAGTGCTAATGGTGCTAAAGAGCATTTaGAAGACCACAAGACATTTT +
Preference number: 4 (lower is better)
Translates to: AFFGISAGLSFKPELVLMVLKSI*KTTRHF
Trigger: AAAATGTCTTGTGGTCTTTCAAATGCTCTTTAGCAC...CATTAGCACTAATTCTGGTTTAAATGAAAGTCCTGCAGAAATGCCAAAGAAGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CCA 90 bp GCCTTCTTTGGCATTTCTGCAGGACTTTCATTTAAACCAGAATTAGTGCTAATGGTTGAGCATGCATGTTaGCTTATAATCCTTCAAGTA +
Preference number: 4 (lower is better)
Translates to: AFFGISAGLSFKPELVLMVEHAC*LIILQV
Trigger: TACTTGAAGGATTATAAGCCAACATGCATGCTCAAC...CATTAGCACTAATTCTGGTTTAAATGAAAGTCCTGCAGAAATGCCAAAGAAGGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR TCA 90 bp GCATACAGTATGTGTCAGACACTATACAAATCATGGACATACGAAGAAGAAAAATTTGGTCGTTTATTCTaGAGAATCCCCTTAGACCAT +
Preference number: 4 (lower is better)
Translates to: AYSMCQTLYKSWTYEEEKFGRLF*RIPLDH
Trigger: ATGGTCTAAGGGGATTCTTCAGAATAAACGACCAAA...TTTTTCTTCTTCGTATGTCCATGATTTGTATAGTGTCTGACACATACTGTATGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441335.6
CDS-3UTR GCA 90 bp AATCATGGACATACGAAGAAGAAAAACAACCAAGTAGCTTACAGACTAACATCCAAATATCAGATGAAGTaGCAGACTGAAAGTAGCACA +
Preference number: 4 (lower is better)
Translates to: NHGHTKKKNNQVAYRLTSKYQMK*QTESST
Trigger: TGTGCTACTTTCAGTCTGGCACTTCATCTGATATTT...GGATGTTAGTCTGTAAGCTACTTGGTTGTTTTTCTTCTTCGTATGTCCATGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441335.6
CDS-3UTR TCA 90 bp ACACTATACAAATCATGGACATACGAAGAAGAAAAACAACCAAGTAGCTTACAGCTGGATCTTAGAAGATaGAGGACTAAGGTTTTTCTA +
Preference number: 4 (lower is better)
Translates to: TLYKSWTYEEEKQPSSLQLDLRR*RTKVFL
Trigger: TAGAAAAACCTTAGTCCTTCATCTTCTAAGATCCAG...CTGTAAGCTACTTGGTTGTTTTTCTTCTTCGTATGTCCATGATTTGTATAGTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000441335.6
CDS-3UTR CCA 90 bp ACACTATACAAATCATGGACATACGAAGAAGAAAAACAACCAAGTAGCTTACAGAGATTCATTATCCCCTaGAACAGTTTTTCTGGTAAA +
Preference number: 4 (lower is better)
Translates to: TLYKSWTYEEEKQPSSLQRFIIP*NSFSGK
Trigger: TTTACCAGAAAAACTGTTCCAGGGGATAATGAATCT...CTGTAAGCTACTTGGTTGTTTTTCTTCTTCGTATGTCCATGATTTGTATAGTGT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000441335.6
CDS-3UTR CAA 90 bp CAGGGTAATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACAGGACGAACCAGTTGTaGACCCTCTACTCCAAGGAT +
Preference number: 5 (lower is better)
Translates to: QGNPPSHNKRIGRGQRQHRTNQL*TLYSKD
Trigger: ATCCTTGGAGTAGAGGGTCAACAACTGGTTCGTCCT...GTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATTACCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CAA 90 bp CAGGGTAATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACAGCTCACTTGGCACTTaGATTGGGATCTGCGATTCC +
Preference number: 5 (lower is better)
Translates to: QGNPPSHNKRIGRGQRQHSSLGT*IGICDS
Trigger: GGAATCGCAGATCCCAATCAAAGTGCCAAGTGAGCT...GTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATTACCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS CCA 90 bp GGAAATCCATTGACCCTGAACTGGTCCTTAGGACAGGCAGGCGAGTaGCCAGTGCACATCTCAGGAAAATCACATTCATCTTTCGCCGGT +
Preference number: 5 (lower is better)
Translates to: GNPLTLNWSLGQAGE*PVHISGKSHSSFAG
Trigger: ACCGGCGAAAGATGAATGTGATTTTCCTGAGATGTGCACTGGCCACTCGCCTGCCTGTCCTAAGGACCAGTTCAGGGTCAATGGATTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000175238.10
ENST00000380789.5
ENST00000520720.1
CDS-3UTR CAA 90 bp CAGGGTAATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACGGAGAGCAGAAGTGCTaGAGAAAAGGAGTTCACCTT +
Preference number: 5 (lower is better)
Translates to: QGNPPSHNKRIGRGQRQHGEQKC*RKGVHL
Trigger: AAGGTGAACTCCTTTTCTCAAGCACTTCTGCTCTCC...GTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATTACCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000175238.10
CDS-3UTR CAA 90 bp CAGGGTAATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACAAGGTTATGCCCCAGTaGATGTGCCATTCTGTTTGC +
Preference number: 5 (lower is better)
Translates to: QGNPPSHNKRIGRGQRQHKVMPQ*MCHSVC
Trigger: GCAAACAGAATGGCACATCAACTGGGGCATAACCTT...GTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATTACCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CAA 90 bp CAGGGTAATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACAGACATTCACCATTGTaGCACACCATTCCCTCTCCA +
Preference number: 5 (lower is better)
Translates to: QGNPPSHNKRIGRGQRQHRHSPL*HTIPSP
Trigger: TGGAGAGGGAATGGTGTGCAACAATGGTGAATGTCT...GTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATTACCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CAA 90 bp CAGGGTAATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACTCACCAAAGTATCCTTaGTTCTCCACTCCCAGGGTT +
Preference number: 5 (lower is better)
Translates to: QGNPPSHNKRIGRGQRQHSPKYP*FSTPRV
Trigger: AACCCTGGGAGTGGAGAACAAAGGATACTTTGGTGA...GTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATTACCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CAA 90 bp CAGGGTAATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACGAATTTCTGGCAGGATaGGCTCAGTCCTTATCTGCT +
Preference number: 5 (lower is better)
Translates to: QGNPPSHNKRIGRGQRQHEFLAG*AQSLSA
Trigger: AGCAGATAAGGACTGAGCCAATCCTGCCAGAAATTC...GTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATTACCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS CCA 90 bp TTCCTCCTCACTTCCACTGCAGGGATGAAGCACCTCACAGATAGGTaGGCAGTTTTGATCCACAACAAGGAAGTGTTCCTTGAGGGAGTT +
Preference number: 5 (lower is better)
Translates to: FLLTSTAGMKHLTDR*AVLIHNKEVFLEGV
Trigger: AACTCCCTCAAGGAACACTTCCTTGTTGTGGATCAAAACTGCCCACCTATCTGTGAGGTGCTTCATCCCTGCAGTGGAAGTGAGGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441335.6
CDS-3UTR CAA 90 bp CAGGGTAATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACGATCTGCGATTCCTCTaGAATCTTTACTTGCAGGTT +
Preference number: 5 (lower is better)
Translates to: QGNPPSHNKRIGRGQRQHDLRFL*NLYLQV
Trigger: AACCTGCAAGTAAAGATTCAAGAGGAATCGCAGATC...GTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATTACCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CAA 90 bp AATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACAGAAATATCCCCAGCCTAAGCTaGCACGGCCATTTTGGATAT +
Preference number: 5 (lower is better)
Translates to: NPPSHNKRIGRGQRQHRNIPSLS*HGHFGY
Trigger: ATATCCAAAATGGCCGTGCAAGCTTAGGCTGGGGAT...ATTTCTGTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS GCA 90 bp TTCTCCTTCTGCACAAGTAAATCCTGGCTTCAGTACACATGTGTGTaGATCACAGCAAGGATTAGTACACTCCTGAGCAGGGCCACAGTC +
Preference number: 5 (lower is better)
Translates to: FSFCTSKSWLQYTCV*ITARISTLLSRATV
Trigger: GACTGTGGCCCTGCTCAGGAGTGTACTAATCCTTGCTGTGATGCACACACATGTGTACTGAAGCCAGGATTTACTTGTGCAGAAGGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000175238.10
ENST00000380789.5
ENST00000520720.1
CDS-3UTR CAA 90 bp AATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACAGAAATTTTAGGACGAACCAGTaGTTGACCCTCTACTCCAAG +
Preference number: 5 (lower is better)
Translates to: NPPSHNKRIGRGQRQHRNFRTNQ*LTLYSK
Trigger: CTTGGAGTAGAGGGTCAACAACTGGTTCGTCCTAAA...ATTTCTGTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CAA 90 bp AATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACAGAAATAGACATTCACCATTGTaGCACACCATTCCCTCTCCA +
Preference number: 5 (lower is better)
Translates to: NPPSHNKRIGRGQRQHRNRHSPL*HTIPSP
Trigger: TGGAGAGGGAATGGTGTGCAACAATGGTGAATGTCT...ATTTCTGTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS TCA 90 bp CTGATCCTCACGAGTTGGACATTTCCCCATGAAACAGTAGCCTTCTaGGTTCTTGCAAGGAAATCCATTGACCCTGAACTGGTCCTTAGG +
Preference number: 5 (lower is better)
Translates to: LILTSWTFPHETVAF*VLARKSIDPELVLR
Trigger: CCTAAGGACCAGTTCAGGGTCAATGGATTTCCTTGCAAGAACTCAGAAGGCTACTGTTTCATGGGGAAATGTCCAACTCGTGAGGATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000175238.10
ENST00000380789.5
ENST00000520720.1
CDS-3UTR CAA 90 bp TTCACTTTTAATTACCTAGAATCCGTGCCGCTCTGCCCTGCCTTCTTTGGCATTAGGACGAACCAGTTGTaGACCCTCTACTCCAAGGAT +
Preference number: 5 (lower is better)
Translates to: FTFNYLESVPLCPAFFGIRTNQL*TLYSKD
Trigger: ATCCTTGGAGTAGAGGGTCAACAACTGGTTCGTCCT...AATGCCAAAGAAGGCAGGGCAGAGCGGCACGGATTCTAGGTAATTAAAAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CAA 90 bp AATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACAGAAATATGTTTCACTGTAATTaGAGCCTAGGAACTCCCTGG +
Preference number: 5 (lower is better)
Translates to: NPPSHNKRIGRGQRQHRNMFHCN*SLGTPW
Trigger: CCAGGGAGTTCCTAGGCTCAAATTACAGTGAAACAT...ATTTCTGTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CAA 90 bp CAGGGTAATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACGTGTACTATGGATCCTaGGTAAAAACAATGATCCAT +
Preference number: 5 (lower is better)
Translates to: QGNPPSHNKRIGRGQRQHVYYGS*VKTMIH
Trigger: ATGGATCATTGTTTTTACCAAGGATCCATAGTACAC...GTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATTACCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CAA 90 bp TTCACTTTTAATTACCTAGAATCCGTGCCGCTCTGCCCTGCCTTCTTTGGCATTAGCTCACTTGGCACTTaGATTGGGATCTGCGATTCC +
Preference number: 5 (lower is better)
Translates to: FTFNYLESVPLCPAFFGISSLGT*IGICDS
Trigger: GGAATCGCAGATCCCAATCAAAGTGCCAAGTGAGCT...AATGCCAAAGAAGGCAGGGCAGAGCGGCACGGATTCTAGGTAATTAAAAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CAA 90 bp TTCACTTTTAATTACCTAGAATCCGTGCCGCTCTGCCCTGCCTTCTTTGGCATTAAGGTTGTAAAGACGTaGCATCCAGAATCCCCAGCC +
Preference number: 5 (lower is better)
Translates to: FTFNYLESVPLCPAFFGIKVVKT*HPESPA
Trigger: GGCTGGGGATTCTGGATGCAACGTCTTTACAACCTT...AATGCCAAAGAAGGCAGGGCAGAGCGGCACGGATTCTAGGTAATTAAAAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CAA 90 bp TTCACTTTTAATTACCTAGAATCCGTGCCGCTCTGCCCTGCCTTCTTTGGCATTAAGGTTATGCCCCAGTaGATGTGCCATTCTGTTTGC +
Preference number: 5 (lower is better)
Translates to: FTFNYLESVPLCPAFFGIKVMPQ*MCHSVC
Trigger: GCAAACAGAATGGCACATCAACTGGGGCATAACCTT...AATGCCAAAGAAGGCAGGGCAGAGCGGCACGGATTCTAGGTAATTAAAAGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CAA 90 bp AATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACAGAAATCAAGTACTGGTGGTATaGGTTTTGGCTGCATTTACT +
Preference number: 5 (lower is better)
Translates to: NPPSHNKRIGRGQRQHRNQVLVV*VLAAFT
Trigger: AGTAAATGCAGCCAAAACCAATACCACCAGTACTTG...ATTTCTGTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CAA 90 bp ACCTTAGAAACCCTTCATAGGAGTTGTGAGTATGTCCTCTCACTTGGAGTAAATTTCCCTCTCCACATTTaGTTCCTGACGCCACCAGGC +
Preference number: 5 (lower is better)
Translates to: TLETLHRSCEYVLSLGVNFPLHI*FLTPPG
Trigger: GCCTGGTGGCGTCAGGAACAAAATGTGGAGAGGGAA...ATTTACTCCAAGTGAGAGGACATACTCACAACTCCTATGAAGGGTTTCTAAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CAA 90 bp AATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACAGAAATAGGTGGGCTCTGAACTaGCTTCAACTTGATACATTT +
Preference number: 5 (lower is better)
Translates to: NPPSHNKRIGRGQRQHRNRWALN*LQLDTF
Trigger: AAATGTATCAAGTTGAAGCAAGTTCAGAGCCCACCT...ATTTCTGTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CAA 90 bp TTCACTTTTAATTACCTAGAATCCGTGCCGCTCTGCCCTGCCTTCTTTGGCATTTCACCAAAGTATCCTTaGTTCTCCACTCCCAGGGTT +
Preference number: 5 (lower is better)
Translates to: FTFNYLESVPLCPAFFGISPKYP*FSTPRV
Trigger: AACCCTGGGAGTGGAGAACAAAGGATACTTTGGTGA...AATGCCAAAGAAGGCAGGGCAGAGCGGCACGGATTCTAGGTAATTAAAAGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CAA 90 bp AATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACAGAAATGATCTGCGATTCCTCTaGAATCTTTACTTGCAGGTT +
Preference number: 5 (lower is better)
Translates to: NPPSHNKRIGRGQRQHRNDLRFL*NLYLQV
Trigger: AACCTGCAAGTAAAGATTCAAGAGGAATCGCAGATC...ATTTCTGTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CAA 90 bp AATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACAGAAATCCTAGGAATTTAGAATaGCCAGGAGCATTCTGTGTT +
Preference number: 5 (lower is better)
Translates to: NPPSHNKRIGRGQRQHRNPRNLE*PGAFCV
Trigger: AACACAGAATGCTCCTGGCAATTCTAAATTCCTAGG...ATTTCTGTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS TCA 90 bp GTGCATGGGAACTCGTCATGCTGCATCCCAAGGTTATGCCCCAGTTaGTGTGCCATTCTGTTTGCAATTATGTTTGTGTCAGGTAAAAGA +
Preference number: 5 (lower is better)
Translates to: VHGNSSCCIPRLCPS*CAILFAIMFVSGKR
Trigger: TCTTTTACCTGACACAAACATAATTGCAAACAGAATGGCACATCAACTGGGGCATAACCTTGGGATGCAGCATGACGAGTTCCCATGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000175238.10
ENST00000380789.5
ENST00000520720.1
CDS-3UTR CAA 90 bp AATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACAGAAATGATGTGCCATTCTGTTaGCAATTATGTTTGTGTCAG +
Preference number: 5 (lower is better)
Translates to: NPPSHNKRIGRGQRQHRNDVPFC*QLCLCQ
Trigger: CTGACACAAACATAATTGCAAACAGAATGGCACATC...ATTTCTGTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CAA 90 bp AATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACAGAAATCTGGTGGTATTGGTTTaGGCTGCATTTACTGAATTT +
Preference number: 5 (lower is better)
Translates to: NPPSHNKRIGRGQRQHRNLVVLV*AAFTEF
Trigger: AAATTCAGTAAATGCAGCCAAAACCAATACCACCAG...ATTTCTGTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CAA 90 bp TTCACTTTTAATTACCTAGAATCCGTGCCGCTCTGCCCTGCCTTCTTTGGCATTGAGAGGGGCAATTGGTaGAGATATAGACCTTTTCCA +
Preference number: 5 (lower is better)
Translates to: FTFNYLESVPLCPAFFGIERGNW*RYRPFP
Trigger: TGGAAAAGGTCTATATCTCAACCAATTGCCCCTCTC...AATGCCAAAGAAGGCAGGGCAGAGCGGCACGGATTCTAGGTAATTAAAAGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CAA 90 bp GACAGCACAGAAATGGCACATTGTCAAATTGCACAGGACAAAGACCTTAGAAACAAGGTTGTAAAGACGTaGCATCCAGAATCCCCAGCC +
Preference number: 5 (lower is better)
Translates to: DSTEMAHCQIAQDKDLRNKVVKT*HPESPA
Trigger: GGCTGGGGATTCTGGATGCAACGTCTTTACAACCTT...GTTTCTAAGGTCTTTGTCCTGTGCAATTTGACAATGTGCCATTTCTGTGCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CAA 90 bp TTCACTTTTAATTACCTAGAATCCGTGCCGCTCTGCCCTGCCTTCTTTGGCATTACCCTCAGGTTATATTaGAACACCAAATGTTCTCCC +
Preference number: 5 (lower is better)
Translates to: FTFNYLESVPLCPAFFGITLRLY*NTKCSP
Trigger: GGGAGAACATTTGGTGTTCAAATATAACCTGAGGGT...AATGCCAAAGAAGGCAGGGCAGAGCGGCACGGATTCTAGGTAATTAAAAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CAA 90 bp AATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACAGAAATACCAAGATGGTGATATaGGTAACATGTAAGGTTTCT +
Preference number: 5 (lower is better)
Translates to: NPPSHNKRIGRGQRQHRNTKMVI*VTCKVS
Trigger: AGAAACCTTACATGTTACCAATATCACCATCTTGGT...ATTTCTGTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CAA 90 bp GACAGCACAGAAATGGCACATTGTCAAATTGCACAGGACAAAGACCTTAGAAACGAATTTCTGGCAGGATaGGCTCAGTCCTTATCTGCT +
Preference number: 5 (lower is better)
Translates to: DSTEMAHCQIAQDKDLRNEFLAG*AQSLSA
Trigger: AGCAGATAAGGACTGAGCCAATCCTGCCAGAAATTC...GTTTCTAAGGTCTTTGTCCTGTGCAATTTGACAATGTGCCATTTCTGTGCTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CAA 90 bp GACAGCACAGAAATGGCACATTGTCAAATTGCACAGGACAAAGACCTTAGAAACGCTTGCACGGCCATTTaGGATATCCAACTTCAAGCT +
Preference number: 5 (lower is better)
Translates to: DSTEMAHCQIAQDKDLRNACTAI*DIQLQA
Trigger: AGCTTGAAGTTGGATATCCAAAATGGCCGTGCAAGC...GTTTCTAAGGTCTTTGTCCTGTGCAATTTGACAATGTGCCATTTCTGTGCTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CAA 90 bp AATCCCCCATCCCATAACAAACGGATAGGGAGAGGGCAGAGACAGCACAGAAATTGTGCTAAAGAGCATTaGAAAGACCACAAGACATTT +
Preference number: 5 (lower is better)
Translates to: NPPSHNKRIGRGQRQHRNCAKEH*KDHKTF
Trigger: AAATGTCTTGTGGTCTTTCAAATGCTCTTTAGCACA...ATTTCTGTGCTGTCTCTGCCCTCTCCCTATCCGTTTGTTATGGGATGGGGGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CAA 90 bp TTCACTTTTAATTACCTAGAATCCGTGCCGCTCTGCCCTGCCTTCTTTGGCATTTGGCACATTGTCAAATaGCACAGGACAAAGACCTTA +
Preference number: 5 (lower is better)
Translates to: FTFNYLESVPLCPAFFGIWHIVK*HRTKTL
Trigger: TAAGGTCTTTGTCCTGTGCAATTTGACAATGTGCCA...AATGCCAAAGAAGGCAGGGCAGAGCGGCACGGATTCTAGGTAATTAAAAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CAA 90 bp TTCACTTTTAATTACCTAGAATCCGTGCCGCTCTGCCCTGCCTTCTTTGGCATTCACAGAAATGGCACATaGTCAAATTGCACAGGACAA +
Preference number: 5 (lower is better)
Translates to: FTFNYLESVPLCPAFFGIHRNGT*SNCTGQ
Trigger: TTGTCCTGTGCAATTTGACAATGTGCCATTTCTGTG...AATGCCAAAGAAGGCAGGGCAGAGCGGCACGGATTCTAGGTAATTAAAAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CAA 90 bp TCATGGACATACGAAGAAGAAAAACAACCAAGTAGCTTACAGACTAACATCCACAGGACGAACCAGTTGTaGACCCTCTACTCCAAGGAT +
Preference number: 5 (lower is better)
Translates to: SWTYEEEKQPSSLQTNIHRTNQL*TLYSKD
Trigger: ATCCTTGGAGTAGAGGGTCAACAACTGGTTCGTCCT...GTGGATGTTAGTCTGTAAGCTACTTGGTTGTTTTTCTTCTTCGTATGTCCATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441335.6
CDS-3UTR CAA 90 bp GCCTTCTTTGGCATTTCTGCAGGACTTTCATTTAAACCAGAATTAGTGCTAATGATCCCCAGCCTAAGCTaGCACGGCCATTTTGGATAT +
Preference number: 5 (lower is better)
Translates to: AFFGISAGLSFKPELVLMIPSLS*HGHFGY
Trigger: ATATCCAAAATGGCCGTGCAAGCTTAGGCTGGGGAT...CATTAGCACTAATTCTGGTTTAAATGAAAGTCCTGCAGAAATGCCAAAGAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS TCA 90 bp CTGTACAGGAATAATTGGCACCATACGGCACCCTCAGGTTATATTTaGACACCAAATGTTCTCCCTCATCTGAGTATTTCACTGGTTCAA +
Preference number: 5 (lower is better)
Translates to: LYRNNWHHTAPSGYI*TPNVLPHLSISLVQ
Trigger: TTGAACCAGTGAAATACTCAGATGAGGGAGAACATTTGGTGTTCAAATATAACCTGAGGGTGCCGTATGGTGCCAATTATTCCTGTACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000175238.10
ENST00000380789.5
ENST00000441335.6
CDS-3UTR CAA 90 bp TGTATAGAAAAGCCTAAAGCTCCAAGGACTACTTTTATACAACCATCCCACCAAGGAGAGCAGAAGTGCTaGAGAAAAGGAGTTCACCTT +
Preference number: 5 (lower is better)
Translates to: CIEKPKAPRTTFIQPSHQGEQKC*RKGVHL
Trigger: AAGGTGAACTCCTTTTCTCAAGCACTTCTGCTCTCC...TTGGTGGGATGGTTGTATAAAAGTAGTCCTTGGAGCTTTAGGCTTTTCTATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000441335.6
CDS-3UTR CAA 90 bp GCCTTCTTTGGCATTTCTGCAGGACTTTCATTTAAACCAGAATTAGTGCTAATGTTTAGGACGAACCAGTaGTTGACCCTCTACTCCAAG +
Preference number: 5 (lower is better)
Translates to: AFFGISAGLSFKPELVLMFRTNQ*LTLYSK
Trigger: CTTGGAGTAGAGGGTCAACAACTGGTTCGTCCTAAA...CATTAGCACTAATTCTGGTTTAAATGAAAGTCCTGCAGAAATGCCAAAGAAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CAA 90 bp ACCTTAGAAACCCTTCATAGGAGTTGTGAGTATGTCCTCTCACTTGGAGTAAATATGTTTCACTGTAATTaGAGCCTAGGAACTCCCTGG +
Preference number: 5 (lower is better)
Translates to: TLETLHRSCEYVLSLGVNMFHCN*SLGTPW
Trigger: CCAGGGAGTTCCTAGGCTCAAATTACAGTGAAACAT...ATTTACTCCAAGTGAGAGGACATACTCACAACTCCTATGAAGGGTTTCTAAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CAA 90 bp GACAGCACAGAAATGGCACATTGTCAAATTGCACAGGACAAAGACCTTAGAAACACCCTCAGGTTATATTaGAACACCAAATGTTCTCCC +
Preference number: 5 (lower is better)
Translates to: DSTEMAHCQIAQDKDLRNTLRLY*NTKCSP
Trigger: GGGAGAACATTTGGTGTTCAAATATAACCTGAGGGT...GTTTCTAAGGTCTTTGTCCTGTGCAATTTGACAATGTGCCATTTCTGTGCTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CAA 90 bp ACCTTAGAAACCCTTCATAGGAGTTGTGAGTATGTCCTCTCACTTGGAGTAAATGAGAGGGGCAATTGGTaGAGATATAGACCTTTTCCA +
Preference number: 5 (lower is better)
Translates to: TLETLHRSCEYVLSLGVNERGNW*RYRPFP
Trigger: TGGAAAAGGTCTATATCTCAACCAATTGCCCCTCTC...ATTTACTCCAAGTGAGAGGACATACTCACAACTCCTATGAAGGGTTTCTAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CAA 90 bp TTCACTTTTAATTACCTAGAATCCGTGCCGCTCTGCCCTGCCTTCTTTGGCATTACCAAGATGGTGATATaGGTAACATGTAAGGTTTCT +
Preference number: 5 (lower is better)
Translates to: FTFNYLESVPLCPAFFGITKMVI*VTCKVS
Trigger: AGAAACCTTACATGTTACCAATATCACCATCTTGGT...AATGCCAAAGAAGGCAGGGCAGAGCGGCACGGATTCTAGGTAATTAAAAGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CAA 90 bp GCCTTCTTTGGCATTTCTGCAGGACTTTCATTTAAACCAGAATTAGTGCTAATGGCTTGCACGGCCATTTaGGATATCCAACTTCAAGCT +
Preference number: 5 (lower is better)
Translates to: AFFGISAGLSFKPELVLMACTAI*DIQLQA
Trigger: AGCTTGAAGTTGGATATCCAAAATGGCCGTGCAAGC...CATTAGCACTAATTCTGGTTTAAATGAAAGTCCTGCAGAAATGCCAAAGAAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS TCA 90 bp CGGCACCCTCAGGTTATATTTGAACACCAAATGTTCTCCCTCATCTaGGTATTTCACTGGTTCAATGAGGTATCTTTGGTCGTTTATTCT +
Preference number: 5 (lower is better)
Translates to: RHPQVIFEHQMFSLI*VFHWFNEVSLVVYS
Trigger: AGAATAAACGACCAAAGATACCTCATTGAACCAGTGAAATACTCAGATGAGGGAGAACATTTGGTGTTCAAATATAACCTGAGGGTGCCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000175238.10
ENST00000380789.5
ENST00000441335.6
CDS CCA 90 bp TGTTCTCCCTCATCTGAGTATTTCACTGGTTCAATGAGGTATCTTTaGTCGTTTATTCTGAAGAATCCCCTTAGACCATTACACGTACTG +
Preference number: 5 (lower is better)
Translates to: CSPSSEYFTGSMRYL*SFILKNPLRPLHVL
Trigger: CAGTACGTGTAATGGTCTAAGGGGATTCTTCAGAATAAACGACCAAAGATACCTCATTGAACCAGTGAAATACTCAGATGAGGGAGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000175238.10
ENST00000380789.5
ENST00000441335.6
CDS-3UTR CAA 90 bp AATCATGGACATACGAAGAAGAAAAACAACCAAGTAGCTTACAGACTAACATCCTTTAGGACGAACCAGTaGTTGACCCTCTACTCCAAG +
Preference number: 5 (lower is better)
Translates to: NHGHTKKKNNQVAYRLTSFRTNQ*LTLYSK
Trigger: CTTGGAGTAGAGGGTCAACAACTGGTTCGTCCTAAA...GGATGTTAGTCTGTAAGCTACTTGGTTGTTTTTCTTCTTCGTATGTCCATGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441335.6
CDS-3UTR CAA 90 bp TCATGGACATACGAAGAAGAAAAACAACCAAGTAGCTTACAGACTAACATCCACATGTTTCACTGTAATTaGAGCCTAGGAACTCCCTGG +
Preference number: 5 (lower is better)
Translates to: SWTYEEEKQPSSLQTNIHMFHCN*SLGTPW
Trigger: CCAGGGAGTTCCTAGGCTCAAATTACAGTGAAACAT...GTGGATGTTAGTCTGTAAGCTACTTGGTTGTTTTTCTTCTTCGTATGTCCATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441335.6
CDS-3UTR CAA 90 bp GACAGCACAGAAATGGCACATTGTCAAATTGCACAGGACAAAGACCTTAGAAACCTGGTGGTATTGGTTTaGGCTGCATTTACTGAATTT +
Preference number: 5 (lower is better)
Translates to: DSTEMAHCQIAQDKDLRNLVVLV*AAFTEF
Trigger: AAATTCAGTAAATGCAGCCAAAACCAATACCACCAG...GTTTCTAAGGTCTTTGTCCTGTGCAATTTGACAATGTGCCATTTCTGTGCTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CAA 90 bp ACCTTAGAAACCCTTCATAGGAGTTGTGAGTATGTCCTCTCACTTGGAGTAAATCAAGTACTGGTGGTATaGGTTTTGGCTGCATTTACT +
Preference number: 5 (lower is better)
Translates to: TLETLHRSCEYVLSLGVNQVLVV*VLAAFT
Trigger: AGTAAATGCAGCCAAAACCAATACCACCAGTACTTG...ATTTACTCCAAGTGAGAGGACATACTCACAACTCCTATGAAGGGTTTCTAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CAA 90 bp GCCTTCTTTGGCATTTCTGCAGGACTTTCATTTAAACCAGAATTAGTGCTAATGTTGCAAGGAAATCCATaGACCCTGAACTGGTCCTTA +
Preference number: 5 (lower is better)
Translates to: AFFGISAGLSFKPELVLMLQGNP*TLNWSL
Trigger: TAAGGACCAGTTCAGGGTCAATGGATTTCCTTGCAA...CATTAGCACTAATTCTGGTTTAAATGAAAGTCCTGCAGAAATGCCAAAGAAGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CAA 90 bp ACCTTAGAAACCCTTCATAGGAGTTGTGAGTATGTCCTCTCACTTGGAGTAAATAGGTGGGCTCTGAACTaGCTTCAACTTGATACATTT +
Preference number: 5 (lower is better)
Translates to: TLETLHRSCEYVLSLGVNRWALN*LQLDTF
Trigger: AAATGTATCAAGTTGAAGCAAGTTCAGAGCCCACCT...ATTTACTCCAAGTGAGAGGACATACTCACAACTCCTATGAAGGGTTTCTAAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CAA 90 bp ACCTTAGAAACCCTTCATAGGAGTTGTGAGTATGTCCTCTCACTTGGAGTAAATTGGCACATTGTCAAATaGCACAGGACAAAGACCTTA +
Preference number: 5 (lower is better)
Translates to: TLETLHRSCEYVLSLGVNWHIVK*HRTKTL
Trigger: TAAGGTCTTTGTCCTGTGCAATTTGACAATGTGCCA...ATTTACTCCAAGTGAGAGGACATACTCACAACTCCTATGAAGGGTTTCTAAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CAA 90 bp ACCTTAGAAACCCTTCATAGGAGTTGTGAGTATGTCCTCTCACTTGGAGTAAATCACAGAAATGGCACATaGTCAAATTGCACAGGACAA +
Preference number: 5 (lower is better)
Translates to: TLETLHRSCEYVLSLGVNHRNGT*SNCTGQ
Trigger: TTGTCCTGTGCAATTTGACAATGTGCCATTTCTGTG...ATTTACTCCAAGTGAGAGGACATACTCACAACTCCTATGAAGGGTTTCTAAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CAA 90 bp ATCAGGAAACATCCATTAGGCATACAGTATGTGTCAGACACTATACAAATCATGGATAGGTGGGCAGTTTaGATCCACAACAAGGAAGTG +
Preference number: 5 (lower is better)
Translates to: IRKHPLGIQYVSDTIQIMDRWAV*IHNKEV
Trigger: CACTTCCTTGTTGTGGATCAAAACTGCCCACCTATC...CATGATTTGTATAGTGTCTGACACATACTGTATGCCTAATGGATGTTTCCTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441335.6
CDS-3UTR CAA 90 bp GCCTTCTTTGGCATTTCTGCAGGACTTTCATTTAAACCAGAATTAGTGCTAATGCCTAGGAATTTAGAATaGCCAGGAGCATTCTGTGTT +
Preference number: 5 (lower is better)
Translates to: AFFGISAGLSFKPELVLMPRNLE*PGAFCV
Trigger: AACACAGAATGCTCCTGGCAATTCTAAATTCCTAGG...CATTAGCACTAATTCTGGTTTAAATGAAAGTCCTGCAGAAATGCCAAAGAAGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CAA 90 bp ACCTTAGAAACCCTTCATAGGAGTTGTGAGTATGTCCTCTCACTTGGAGTAAATGTGTACTATGGATCCTaGGTAAAAACAATGATCCAT +
Preference number: 5 (lower is better)
Translates to: TLETLHRSCEYVLSLGVNVYYGS*VKTMIH
Trigger: ATGGATCATTGTTTTTACCAAGGATCCATAGTACAC...ATTTACTCCAAGTGAGAGGACATACTCACAACTCCTATGAAGGGTTTCTAAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS-3UTR CAA 90 bp CAACCAAGTAGCTTACAGACTAACATCCACTGGGAATTTAAGGGGATATGGATTGTGTACTATGGATCCTaGGTAAAAACAATGATCCAT +
Preference number: 5 (lower is better)
Translates to: QPSSLQTNIHWEFKGIWIVYYGS*VKTMIH
Trigger: ATGGATCATTGTTTTTACCAAGGATCCATAGTACAC...AATCCATATCCCCTTAAATTCCCAGTGGATGTTAGTCTGTAAGCTACTTGGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441335.6
CDS CCA 90 bp GAAATCATGAAAATTGTAAGGAAATGGAATGTTGAGCATGCATGTTaGCTTATAATCCTTCAAGTACTGGTGGTATTGGTTTTGGCTGCA +
Preference number: 5 (lower is better)
Translates to: EIMKIVRKWNVEHAC*LIILQVLVVLVLAA
Trigger: TGCAGCCAAAACCAATACCACCAGTACTTGAAGGATTATAAGCCAACATGCATGCTCAACATTCCATTTCCTTACAATTTTCATGATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000175238.10
ENST00000380789.5
ENST00000520720.1
CDS-3UTR CAA 90 bp ACACTATACAAATCATGGACATACGAAGAAGAAAAACAACCAAGTAGCTTACAGACCCTCAGGTTATATTaGAACACCAAATGTTCTCCC +
Preference number: 5 (lower is better)
Translates to: TLYKSWTYEEEKQPSSLQTLRLY*NTKCSP
Trigger: GGGAGAACATTTGGTGTTCAAATATAACCTGAGGGT...CTGTAAGCTACTTGGTTGTTTTTCTTCTTCGTATGTCCATGATTTGTATAGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441335.6
CDS-3UTR CAA 90 bp GCCTTCTTTGGCATTTCTGCAGGACTTTCATTTAAACCAGAATTAGTGCTAATGTGTGCTAAAGAGCATTaGAAAGACCACAAGACATTT +
Preference number: 5 (lower is better)
Translates to: AFFGISAGLSFKPELVLMCAKEH*KDHKTF
Trigger: AAATGTCTTGTGGTCTTTCAAATGCTCTTTAGCACA...CATTAGCACTAATTCTGGTTTAAATGAAAGTCCTGCAGAAATGCCAAAGAAGGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS CCA 72 bp CAGGCTACAGGTGCCTGTCCTTCCTCACAGTGGCACTaGAGTCCGTGGCCATCCACAGGATTTTCATTGCAC +
Preference number: 6 (lower is better)
Translates to: QATGACPSSQWH*SPWPSTGFSLH
Trigger: GTGCAATGAAAATCCTGTGGATGGCCACGGACTCCAGTGCCACTGTGAGGAAGGACAGGCACCTGTAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000175238.10
ENST00000380789.5
ENST00000520720.1
CDS CCA 72 bp TCTTCACAGGCTACAGGTGCCTGTCCTTCCTCACAGTaGCACTGGAGTCCGTGGCCATCCACAGGATTTTCA +
Preference number: 6 (lower is better)
Translates to: SSQATGACPSSQ*HWSPWPSTGFS
Trigger: TGAAAATCCTGTGGATGGCCACGGACTCCAGTGCCACTGTGAGGAAGGACAGGCACCTGTAGCCTGTGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000175238.10
ENST00000380789.5
ENST00000520720.1
CDS CCA 72 bp TCTGAGTTCTTGCAAGGAAATCCATTGACCCTGAACTaGTCCTTAGGACAGGCAGGCGAGTGGCCAGTGCAC +
Preference number: 6 (lower is better)
Translates to: SEFLQGNPLTLN*SLGQAGEWPVH
Trigger: GTGCACTGGCCACTCGCCTGCCTGTCCTAAGGACCAGTTCAGGGTCAATGGATTTCCTTGCAAGAACTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000175238.10
ENST00000380789.5
ENST00000520720.1
CDS TCA 72 bp GATGACCATTTCTGCGATATGGAGCTGGAGAAGTGCTaGAGAGGGACAGGAAACTGTAGCTACCCCTTCCCT +
Preference number: 6 (lower is better)
Translates to: DDHFCDMELEKC*RGTGNCSYPFP
Trigger: AGGGAAGGGGTAGCTACAGTTTCCTGTCCCTCTTCAGCACTTCTCCAGCTCCATATCGCAGAAATGGTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520720.1
CDS CCA 72 bp TTGACCCTGAACTGGTCCTTAGGACAGGCAGGCGAGTaGCCAGTGCACATCTCAGGAAAATCACATTCATCT +
Preference number: 6 (lower is better)
Translates to: LTLNWSLGQAGE*PVHISGKSHSS
Trigger: AGATGAATGTGATTTTCCTGAGATGTGCACTGGCCACTCGCCTGCCTGTCCTAAGGACCAGTTCAGGGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000175238.10
ENST00000380789.5
ENST00000520720.1
CDS CCA 72 bp ACTTCCACTGCAGGGATGAAGCACCTCACAGATAGGTaGGCAGTTTTGATCCACAACAAGGAAGTGTTCCTT +
Preference number: 6 (lower is better)
Translates to: TSTAGMKHLTDR*AVLIHNKEVFL
Trigger: AAGGAACACTTCCTTGTTGTGGATCAAAACTGCCCACCTATCTGTGAGGTGCTTCATCCCTGCAGTGGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441335.6
CDS CAA 90 bp ACTTCCACTGCAGGGATGAAGCACCTCACAGATAGGTGGGCAGTTTaGATCCACAACAAGGAAGTGTTCCTTGAGGGAGTTACACAACTT +
Preference number: 6 (lower is better)
Translates to: TSTAGMKHLTDRWAV*IHNKEVFLEGVTQL
Trigger: AAGTTGTGTAACTCCCTCAAGGAACACTTCCTTGTTGTGGATCAAAACTGCCCACCTATCTGTGAGGTGCTTCATCCCTGCAGTGGAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441335.6
CDS TCA 72 bp CAGAGCACTGATCCTCACGAGTTGGACATTTCCCCATaGAACAGTAGCCTTCTGAGTTCTTGCAAGGAAATC +
Preference number: 6 (lower is better)
Translates to: QSTDPHELDISP*NSSLLSSCKEI
Trigger: GATTTCCTTGCAAGAACTCAGAAGGCTACTGTTTCATGGGGAAATGTCCAACTCGTGAGGATCAGTGCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000175238.10
ENST00000380789.5
ENST00000520720.1
CDS GCA 72 bp TGCACAAGTAAATCCTGGCTTCAGTACACATGTGTGTaGATCACAGCAAGGATTAGTACACTCCTGAGCAGG +
Preference number: 6 (lower is better)
Translates to: CTSKSWLQYTCV*ITARISTLLSR
Trigger: CCTGCTCAGGAGTGTACTAATCCTTGCTGTGATGCACACACATGTGTACTGAAGCCAGGATTTACTTGTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000175238.10
ENST00000380789.5
ENST00000520720.1
CDS CCA 72 bp ATCCAGAATCCCCAGCCTAAGCTTGCACGGCCATTTTaGATATCCAACTTCAAGCTCACTTGGCACTTTGAT +
Preference number: 6 (lower is better)
Translates to: IQNPQPKLARPF*ISNFKLTWHFD
Trigger: ATCAAAGTGCCAAGTGAGCTTGAAGTTGGATATCCAAAATGGCCGTGCAAGCTTAGGCTGGGGATTCTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS CAA 72 bp TGTAAAGACGTTGCATCCAGAATCCCCAGCCTAAGCTaGCACGGCCATTTTGGATATCCAACTTCAAGCTCA +
Preference number: 6 (lower is better)
Translates to: CKDVASRIPSLS*HGHFGYPTSSS
Trigger: TGAGCTTGAAGTTGGATATCCAAAATGGCCGTGCAAGCTTAGGCTGGGGATTCTGGATGCAACGTCTTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS TCA 72 bp ACGAGTTGGACATTTCCCCATGAAACAGTAGCCTTCTaGGTTCTTGCAAGGAAATCCATTGACCCTGAACTG +
Preference number: 6 (lower is better)
Translates to: TSWTFPHETVAF*VLARKSIDPEL
Trigger: CAGTTCAGGGTCAATGGATTTCCTTGCAAGAACTCAGAAGGCTACTGTTTCATGGGGAAATGTCCAACTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000175238.10
ENST00000380789.5
ENST00000520720.1
CDS CAA 72 bp GAACTCGTCATGCTGCATCCCAAGGTTATGCCCCAGTaGATGTGCCATTCTGTTTGCAATTATGTTTGTGTC +
Preference number: 6 (lower is better)
Translates to: ELVMLHPKVMPQ*MCHSVCNYVCV
Trigger: GACACAAACATAATTGCAAACAGAATGGCACATCAACTGGGGCATAACCTTGGGATGCAGCATGACGAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000175238.10
ENST00000380789.5
ENST00000520720.1
CDS TCA 72 bp AACTCGTCATGCTGCATCCCAAGGTTATGCCCCAGTTaGTGTGCCATTCTGTTTGCAATTATGTTTGTGTCA +
Preference number: 6 (lower is better)
Translates to: NSSCCIPRLCPS*CAILFAIMFVS
Trigger: TGACACAAACATAATTGCAAACAGAATGGCACATCAACTGGGGCATAACCTTGGGATGCAGCATGACGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000175238.10
ENST00000380789.5
ENST00000520720.1
CDS CAA 90 bp AGTATCTCGCTTCTGTATCAGAGGAAGCTTTTTAGGACGAACCAGTaGTTGACCCTCTACTCCAAGGATGAACTTTTCTTTAACCTGAGG +
Preference number: 6 (lower is better)
Translates to: SISLLYQRKLFRTNQ*LTLYSKDELFFNLR
Trigger: CCTCAGGTTAAAGAAAAGTTCATCCTTGGAGTAGAGGGTCAACAACTGGTTCGTCCTAAAAAGCTTCCTCTGATACAGAAGCGAGATACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000175238.10
ENST00000380789.5
ENST00000441335.6
CDS TCA 72 bp TCACTTGGCACTTTGATTGGGATCTGCGATTCCTCTTaGATCTTTACTTGCAGGTTTCAGTGTGATGTAGTG +
Preference number: 6 (lower is better)
Translates to: SLGTLIGICDSS*IFTCRFQCDVV
Trigger: CACTACATCACACTGAAACCTGCAAGTAAAGATTCAAGAGGAATCGCAGATCCCAATCAAAGTGCCAAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380789.5
CDS CCA 72 bp TGGATATCCAACTTCAAGCTCACTTGGCACTTTGATTaGGATCTGCGATTCCTCTTGAATCTTTACTTGCAG +
Preference number: 6 (lower is better)
Translates to: WISNFKLTWHFD*DLRFLLNLYLQ
Trigger: CTGCAAGTAAAGATTCAAGAGGAATCGCAGATCCCAATCAAAGTGCCAAGTGAGCTTGAAGTTGGATATCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS CAA 90 bp ATCTCGCTTCTGTATCAGAGGAAGCTTTTTAGGACGAACCAGTTGTaGACCCTCTACTCCAAGGATGAACTTTTCTTTAACCTGAGGAAT +
Preference number: 6 (lower is better)
Translates to: ISLLYQRKLFRTNQL*TLYSKDELFFNLRN
Trigger: ATTCCTCAGGTTAAAGAAAAGTTCATCCTTGGAGTAGAGGGTCAACAACTGGTTCGTCCTAAAAAGCTTCCTCTGATACAGAAGCGAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000175238.10
ENST00000380789.5
ENST00000441335.6
CDS CAA 90 bp GTTGAGCATGCATGTTGGCTTATAATCCTTCAAGTACTGGTGGTATaGGTTTTGGCTGCATTTACTGAATTTCAGTGCAGGAATGCTTCC +
Preference number: 6 (lower is better)
Translates to: VEHACWLIILQVLVV*VLAAFTEFQCRNAS
Trigger: GGAAGCATTCCTGCACTGAAATTCAGTAAATGCAGCCAAAACCAATACCACCAGTACTTGAAGGATTATAAGCCAACATGCATGCTCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000175238.10
ENST00000380789.5
ENST00000520720.1
CDS TCA 72 bp TGTATCAGAGGAAGCTTTTTAGGACGAACCAGTTGTTaGCCCTCTACTCCAAGGATGAACTTTTCTTTAACC +
Preference number: 6 (lower is better)
Translates to: CIRGSFLGRTSC*PSTPRMNFSLT
Trigger: GGTTAAAGAAAAGTTCATCCTTGGAGTAGAGGGTCAACAACTGGTTCGTCCTAAAAAGCTTCCTCTGATACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000175238.10
ENST00000380789.5
ENST00000441335.6
CDS CAA 72 bp CTGTATCAGAGGAAGCTTTTTAGGACGAACCAGTTGTaGACCCTCTACTCCAAGGATGAACTTTTCTTTAAC +
Preference number: 6 (lower is better)
Translates to: LYQRKLFRTNQL*TLYSKDELFFN
Trigger: GTTAAAGAAAAGTTCATCCTTGGAGTAGAGGGTCAACAACTGGTTCGTCCTAAAAAGCTTCCTCTGATACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000175238.10
ENST00000380789.5
ENST00000441335.6
CDS CAA 72 bp CTTCTGTATCAGAGGAAGCTTTTTAGGACGAACCAGTaGTTGACCCTCTACTCCAAGGATGAACTTTTCTTT +
Preference number: 6 (lower is better)
Translates to: LLYQRKLFRTNQ*LTLYSKDELFF
Trigger: AAAGAAAAGTTCATCCTTGGAGTAGAGGGTCAACAACTGGTTCGTCCTAAAAAGCTTCCTCTGATACAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000175238.10
ENST00000380789.5
ENST00000441335.6
CDS CAA 72 bp GCATGTTGGCTTATAATCCTTCAAGTACTGGTGGTATaGGTTTTGGCTGCATTTACTGAATTTCAGTGCAGG +
Preference number: 6 (lower is better)
Translates to: ACWLIILQVLVV*VLAAFTEFQCR
Trigger: CCTGCACTGAAATTCAGTAAATGCAGCCAAAACCAATACCACCAGTACTTGAAGGATTATAAGCCAACATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000175238.10
ENST00000380789.5
ENST00000520720.1
CDS CAA 90 bp CATGCATGTTGGCTTATAATCCTTCAAGTACTGGTGGTATTGGTTTaGGCTGCATTTACTGAATTTCAGTGCAGGAATGCTTCCATCACT +
Preference number: 6 (lower is better)
Translates to: HACWLIILQVLVVLV*AAFTEFQCRNASIT
Trigger: AGTGATGGAAGCATTCCTGCACTGAAATTCAGTAAATGCAGCCAAAACCAATACCACCAGTACTTGAAGGATTATAAGCCAACATGCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000175238.10
ENST00000380789.5
ENST00000520720.1
CDS CCA 72 bp AATTCTTCTTCATACGTTTTCAGTATGTCATCATCATaGGTGTGTCCAGTATCTCGCTTCTGTATCAGAGGA +
Preference number: 6 (lower is better)
Translates to: NSSSYVFSMSSS*VCPVSRFCIRG
Trigger: TCCTCTGATACAGAAGCGAGATACTGGACACACCCATGATGATGACATACTGAAAACGTATGAAGAAGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000175238.10
ENST00000380789.5
ENST00000441335.6
CDS CAA 72 bp TGGCTTATAATCCTTCAAGTACTGGTGGTATTGGTTTaGGCTGCATTTACTGAATTTCAGTGCAGGAATGCT +
Preference number: 6 (lower is better)
Translates to: WLIILQVLVVLV*AAFTEFQCRNA
Trigger: AGCATTCCTGCACTGAAATTCAGTAAATGCAGCCAAAACCAATACCACCAGTACTTGAAGGATTATAAGCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000175238.10
ENST00000380789.5
ENST00000520720.1
CDS CAA 90 bp AACTTCAAGCTCACTTGGCACTTTGATTGGGATCTGCGATTCCTCTaGAATCTTTACTTGCAGGTTTATTTAGGAAATGAATTTCTGGCA +
Preference number: 6 (lower is better)
Translates to: NFKLTWHFDWDLRFL*NLYLQVYLGNEFLA
Trigger: TGCCAGAAATTCATTTCCTAAATAAACCTGCAAGTAAAGATTCAAGAGGAATCGCAGATCCCAATCAAAGTGCCAAGTGAGCTTGAAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000175238.10
CDS CAA 72 bp CTCACTTGGCACTTTGATTGGGATCTGCGATTCCTCTaGAATCTTTACTTGCAGGTTTATTTAGGAAATGAA +
Preference number: 6 (lower is better)
Translates to: LTWHFDWDLRFL*NLYLQVYLGNE
Trigger: TTCATTTCCTAAATAAACCTGCAAGTAAAGATTCAAGAGGAATCGCAGATCCCAATCAAAGTGCCAAGTGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000175238.10
CDS TCA 72 bp GACCATTTCTGCGATACACAGTATCATCAGCAACAATaGACAATTCAACATACTTTTCATCATGGATGCCTT +
Preference number: 6 (lower is better)
Translates to: DHFCDTQYHQQQ*TIQHTFHHGCL
Trigger: AAGGCATCCATGATGAAAAGTATGTTGAATTGTTCATTGTTGCTGATGATACTGTGTATCGCAGAAATGGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000175238.10
ENST00000380789.5
CDS CCA 72 bp TCATCTGAGTATTTCACTGGTTCAATGAGGTATCTTTaGTCGTTTATTCTGAAGAATCCCCTTAGACCATTA +
Preference number: 6 (lower is better)
Translates to: SSEYFTGSMRYL*SFILKNPLRPL
Trigger: TAATGGTCTAAGGGGATTCTTCAGAATAAACGACCAAAGATACCTCATTGAACCAGTGAAATACTCAGATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000175238.10
ENST00000380789.5
ENST00000441335.6
CDS CCA 72 bp AAAATTGTAAGGAAATGGAATGTTGAGCATGCATGTTaGCTTATAATCCTTCAAGTACTGGTGGTATTGGTT +
Preference number: 6 (lower is better)
Translates to: KIVRKWNVEHAC*LIILQVLVVLV
Trigger: AACCAATACCACCAGTACTTGAAGGATTATAAGCCAACATGCATGCTCAACATTCCATTTCCTTACAATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000175238.10
ENST00000380789.5
ENST00000520720.1