RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADAM33 (Homo sapiens)

Ensembl gene IDs: ENSG00000149451

Ensembl transcript IDs: ENST00000350009.6, ENST00000356518.7, ENST00000379861.8, ENST00000466620.5, ENST00000483362.1, ENST00000617732.1, ENST00000619289.4

Found 868 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGGTCCCTTCTGCAGCCCCAGCTGCATCGCTGCAGATGGGCTCCTaGGAGTCGGTAGCAACACCAGGCCAGGCCGGCCCCTGGGAGCAG +
Preference number: 1 (lower is better)
Translates to: RVPSAAPAASLQMGS*ESVATPGQAGPWEQ
Trigger: CTGCTCCCAGGGGCCGGCCTGGCCTGGTGTTGCTACCGACTCCCAGGAGCCCATCTGCAGCGATGCAGCTGGGGCTGCAGAAGGGACCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617732.1
3UTR GCA 90 bp CCCTGTGTGGGCCATCTTTGGGGCCACTGCACGCAGGGTCCCTTCTaGAGCCCCAGCTGCATCGCTGCAGATGGGCTCCTGGGAGTCGGT +
Preference number: 1 (lower is better)
Translates to: PCVGHLWGHCTQGPF*SPSCIAADGLLGVG
Trigger: ACCGACTCCCAGGAGCCCATCTGCAGCGATGCAGCTGGGGCTGCAGAAGGGACCCTGCGTGCAGTGGCCCCAAAGATGGCCCACACAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617732.1
3UTR GCA 90 bp TGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTaGAGGTGCTGGAGGTCCGGTGATTCACTGGCTCTGCCCCTGCAG +
Preference number: 1 (lower is better)
Translates to: WVGRSSTRGRNFQAA*RCWRSGDSLALPLQ
Trigger: CTGCAGGGGCAGAGCCAGTGAATCACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
3UTR GCA 90 bp TCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTGATTCACTGGCTCTaGCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCT +
Preference number: 1 (lower is better)
Translates to: SKLPAGAGGPVIHWL*PCSSSSWSGCQWPP
Trigger: AGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGCCAGTGAATCACCGGACCTCCAGCACCTGCAGGCAGCTTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
3UTR CCA 90 bp CAGGTTCCTTTCCAGGTGAGCAGCTGCTCCATCCGAAAGATCTCGTaGGTTGAGAAGTCCTTGGAGCCCCGGGGTGGCCAGGGACGCAGA +
Preference number: 1 (lower is better)
Translates to: QVPFQVSSCSIRKIS*VEKSLEPRGGQGRR
Trigger: TCTGCGTCCCTGGCCACCCCGGGGCTCCAAGGACTTCTCAACCCACGAGATCTTTCGGATGGAGCAGCTGCTCACCTGGAAAGGAACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617732.1
3UTR CCA 90 bp TACAGCATTCCCACTCCCATCCGATCGATGCCCCTGACCCTGCTCTaGGGACCACCAGGAAGGCTGGTCATGCCCGCTTTGTTCCCAGGA +
Preference number: 1 (lower is better)
Translates to: YSIPTPIRSMPLTLL*GPPGRLVMPALFPG
Trigger: TCCTGGGAACAAAGCGGGCATGACCAGCCTTCCTGGTGGTCCCCAGAGCAGGGTCAGGGGCATCGATCGGATGGGAGTGGGAATGCTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617732.1
3UTR CCA 90 bp CCACCAGGAAGGCTGGTCATGCCCGCTTTGTTCCCAGGATCCCTGTaGCCACAGGTTCCTTTCCAGGTGAGCAGCTGCTCCATCCGAAAG +
Preference number: 1 (lower is better)
Translates to: PPGRLVMPALFPGSL*PQVPFQVSSCSIRK
Trigger: CTTTCGGATGGAGCAGCTGCTCACCTGGAAAGGAACCTGTGGCCACAGGGATCCTGGGAACAAAGCGGGCATGACCAGCCTTCCTGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617732.1
3UTR CCA 90 bp GAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTGATTCACTaGCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGG +
Preference number: 1 (lower is better)
Translates to: ETSKLPAGAGGPVIH*LCPCSSSSWSGCQW
Trigger: CCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGCCAGTGAATCACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
3UTR TCA 90 bp TCCTTTCCAGGTGAGCAGCTGCTCCATCCGAAAGATCTCGTGGGTTaGGAAGTCCTTGGAGCCCCGGGGTGGCCAGGGACGCAGATAATA +
Preference number: 1 (lower is better)
Translates to: SFPGEQLLHPKDLVG*EVLGAPGWPGTQII
Trigger: TATTATCTGCGTCCCTGGCCACCCCGGGGCTCCAAGGACTTCTCAACCCACGAGATCTTTCGGATGGAGCAGCTGCTCACCTGGAAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617732.1
3UTR CCA 90 bp CAGCCCTCAGGAACTTCTAATGTGGCTCTGGGTTCCTGGAGTGGGTaGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCA +
Preference number: 1 (lower is better)
Translates to: QPSGTSNVALGSWSG*VEAPLGEETSKLPA
Trigger: TGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAACCCAGAGCCACATTAGAAGTTCCTGAGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
3UTR CCA 90 bp ACTAGCTTCTGGCCAGCAGTCATGCCCTCCACAGAGCTGGGTCCGTaGAAATTGCATGTAGGAGACACACCAGACTCCCAGGACAGAGCC +
Preference number: 1 (lower is better)
Translates to: TSFWPAVMPSTELGP*KLHVGDTPDSQDRA
Trigger: GGCTCTGTCCTGGGAGTCTGGTGTGTCTCCTACATGCAATTTCCACGGACCCAGCTCTGTGGAGGGCATGACTGCTGGCCAGAAGCTAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
3UTR TCA 90 bp ACTGGTGAGGGAGGTCAGGGGCTGTGTGACCTTTGCTTCTGGGACTaGTGGTTTATTGAGCTGGAGAGTGTGCCCAGCAGTGTTCTCCAG +
Preference number: 1 (lower is better)
Translates to: TGEGGQGLCDLCFWD*WFIELESVPSSVLQ
Trigger: CTGGAGAACACTGCTGGGCACACTCTCCAGCTCAATAAACCATCAGTCCCAGAAGCAAAGGTCACACAGCCCCTGACCTCCCTCACCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
3UTR CCA 90 bp CACTGGCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTaGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCTCTCA +
Preference number: 1 (lower is better)
Translates to: HWLCPCSSSSWSGCQ*PPVFKSVHFRSYLS
Trigger: TGAGAGGTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGCCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617732.1
3UTR TCA 90 bp CTTGTTTCTTCAGACTTCAATAAAAATACTGGGACTCGAGGCCTGTaGATTCCCGTCTCTTCTGATTTGGAGGGCTATAGATACAGCATT +
Preference number: 1 (lower is better)
Translates to: LVSSDFNKNTGTRGL*IPVSSDLEGYRYSI
Trigger: AATGCTGTATCTATAGCCCTCCAAATCAGAAGAGACGGGAATTCACAGGCCTCGAGTCCCAGTATTTTTATTGAAGTCTGAAGAAACAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617732.1
3UTR-3UTR TCA 90 bp AGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTCATGCCCTCCACAGAGCTGGGTGCTGGAGGTCCGGTaGTTCACTGGCTCTGCCCCT +
Preference number: 2 (lower is better)
Translates to: RAPGPLASGQQSCPPQSWVLEVR*FTGSAP
Trigger: AGGGGCAGAGCCAGTGAATCACCGGACCTCCAGCAC...CCAGCTCTGTGGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
3UTR-3UTR TCA 90 bp GACTGCTGGCAGAGGCTTCTCAGGGTGGCTGCTGGGCTCATGAGAGTTCTCAGGGCTGGGCTTGAGCCCTaGCCACCAATCCCAGCTCCC +
Preference number: 2 (lower is better)
Translates to: DCWQRLLRVAAGLMRVLRAGLEP*PPIPAP
Trigger: GGGAGCTGGGATTGGTGGTCAGGGCTCAAGCCCAGC...CCTGAGAACTCTCATGAGCCCAGCAGCCACCCTGAGAAGCCTCTGCCAGCAGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617732.1
3UTR-3UTR CCA 90 bp GCGAGACTGCTGGCAGAGGCTTCTCAGGGTGGCTGCTGGGCTCATGAGAGTTCTGCCAGGGCTGTCCAGTaGCTGTGGGGCCCAACTCCA +
Preference number: 2 (lower is better)
Translates to: ARLLAEASQGGCWAHESSARAVQ*LWGPTP
Trigger: TGGAGTTGGGCCCCACAGCCACTGGACAGCCCTGGC...AGAACTCTCATGAGCCCAGCAGCCACCCTGAGAAGCCTCTGCCAGCAGTCTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617732.1
3UTR-3UTR GCA 90 bp AGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTCATGCCCTCCACAGAGCTGGCAAGCTGCCTGCAGGTaGTGGAGGTCCGGTGATTCA +
Preference number: 2 (lower is better)
Translates to: RAPGPLASGQQSCPPQSWQAACR*WRSGDS
Trigger: TGAATCACCGGACCTCCAGCACCTGCAGGCAGCTTG...CCAGCTCTGTGGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
3UTR-3UTR GCA 90 bp CCTTCTGCAGCCCCAGCTGCATCGCTGCAGATGGGCTCCTGGGAGTCGGTAGCAAACTTCCAAGCTGCCTaGAGGTGCTGGAGGTCCGGT +
Preference number: 2 (lower is better)
Translates to: PSAAPAASLQMGSWESVANFQAA*RCWRSG
Trigger: ACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTT...TGCTACCGACTCCCAGGAGCCCATCTGCAGCGATGCAGCTGGGGCTGCAGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617732.1
3UTR-3UTR GCA 90 bp CTGGCAGAGGCTTCTCAGGGTGGCTGCTGGGCTCATGAGAGTTCTCAGGGTCCACCCCAGCTGCATCGCTaGAGATGGGCTCCTGGGAGT +
Preference number: 2 (lower is better)
Translates to: LAEASQGGCWAHESSQGPPQLHR*RWAPGS
Trigger: ACTCCCAGGAGCCCATCTGCAGCGATGCAGCTGGGG...TGGACCCTGAGAACTCTCATGAGCCCAGCAGCCACCCTGAGAAGCCTCTGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617732.1
3UTR-3UTR CCA 90 bp CCTGCTCTGGGGACCACCAGGAAGGCTGGTCATGCCCGCTTTGTTCCCAGGATCGCTGCCTGCAGGTGCTaGAGGTCCGGTGATTCACTG +
Preference number: 2 (lower is better)
Translates to: PALGTTRKAGHARFVPRIAACRC*RSGDSL
Trigger: CAGTGAATCACCGGACCTCCAGCACCTGCAGGCAGC...GATCCTGGGAACAAAGCGGGCATGACCAGCCTTCCTGGTGGTCCCCAGAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617732.1
3UTR-3UTR CCA 90 bp ACCCTGCTCTGGGGACCACCAGGAAGGCTGGTCATGCCCGCTTTGTTCCCAGGAGTGGCTCTGGGTTCCTaGAGTGGGTGGGTCGAAGCT +
Preference number: 2 (lower is better)
Translates to: TLLWGPPGRLVMPALFPGVALGS*SGWVEA
Trigger: AGCTTCGACCCACCCACTCCAGGAACCCAGAGCCAC...TCCTGGGAACAAAGCGGGCATGACCAGCCTTCCTGGTGGTCCCCAGAGCAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617732.1
3UTR-3UTR TCA 90 bp TTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCGTGCTGGAGGTCCGGTaGTTCACTGGCTCTGCCCCT +
Preference number: 2 (lower is better)
Translates to: FLEWVGRSSTRGRNFQAAVLEVR*FTGSAP
Trigger: AGGGGCAGAGCCAGTGAATCACCGGACCTCCAGCAC...GGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
3UTR-3UTR GCA 90 bp CCTTCTGCAGCCCCAGCTGCATCGCTGCAGATGGGCTCCTGGGAGTCGGTAGCATCATCCCAGAGCAGGTaGAGAGGACTACCCAGGAGT +
Preference number: 2 (lower is better)
Translates to: PSAAPAASLQMGSWESVASSQSR*RGLPRS
Trigger: ACTCCTGGGTAGTCCTCTGCACCTGCTCTGGGATGA...TGCTACCGACTCCCAGGAGCCCATCTGCAGCGATGCAGCTGGGGCTGCAGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617732.1
3UTR-3UTR CCA 90 bp GGTCCCTTCTGCAGCCCCAGCTGCATCGCTGCAGATGGGCTCCTGGGAGTCGGTTTCAAGTTCCTGGAGTaGCTGTCAGTGGCCACCTGT +
Preference number: 2 (lower is better)
Translates to: GPFCSPSCIAADGLLGVGFKFLE*LSVATC
Trigger: ACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAA...ACCGACTCCCAGGAGCCCATCTGCAGCGATGCAGCTGGGGCTGCAGAAGGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617732.1
3UTR-3UTR TCA 90 bp CCCTCAGGAACTTCTAATGTGGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTGTGCTGGAGGTCCGGTaGTTCACTGGCTCTGCCCCT +
Preference number: 2 (lower is better)
Translates to: PSGTSNVALGSWSGWVEAVLEVR*FTGSAP
Trigger: AGGGGCAGAGCCAGTGAATCACCGGACCTCCAGCAC...AGCTTCGACCCACCCACTCCAGGAACCCAGAGCCACATTAGAAGTTCCTGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
3UTR-3UTR TCA 90 bp TTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCCCTGCTTCAGCCTCCTaGGCAGCTAGGCCTACAGGT +
Preference number: 2 (lower is better)
Translates to: FLEWVGRSSTRGRNFQAAPASAS*AARPTG
Trigger: ACCTGTAGGCCTAGCTGCTCAGGAGGCTGAAGCAGG...GGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
3UTR-3UTR TCA 90 bp TCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGAGACACACCAGACTCCCAGGAGGCAGCAGGACGCTaGGGAGCATGGCCAGCAGGA +
Preference number: 2 (lower is better)
Translates to: STELGPWKLHVGDTPDSQEAAGR*GAWPAG
Trigger: TCCTGCTGGCCATGCTCCTCAGCGTCCTGCTGCCTC...CTGGGAGTCTGGTGTGTCTCCTACATGCAATTTCCACGGACCCAGCTCTGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617732.1
3UTR-3UTR CCA 90 bp AGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTCATGCCCTCCACAGAGCTGGTGCAGTTCAAGTTCCTaGAGTGGCTGTCAGTGGCCA +
Preference number: 2 (lower is better)
Translates to: RAPGPLASGQQSCPPQSWCSSSS*SGCQWP
Trigger: TGGCCACTGACAGCCACTCCAGGAACTTGAACTGCA...CCAGCTCTGTGGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
3UTR-3UTR CCA 90 bp AACCATAGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTCATGCCCTCCACAGGGTCCGGTGATTCACTaGCTCTGCCCCTGCAGTTCA +
Preference number: 2 (lower is better)
Translates to: NHRAPGPLASGQQSCPPQGPVIH*LCPCSS
Trigger: TGAACTGCAGGGGCAGAGCCAGTGAATCACCGGACC...CTGTGGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCTATGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
3UTR-3UTR CCA 90 bp GGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGTCCGGTGATTCACTaGCTCTGCCCCTGCAGTTCA +
Preference number: 2 (lower is better)
Translates to: GWVEAPLGEETSKLPAGAGPVIH*LCPCSS
Trigger: TGAACTGCAGGGGCAGAGCCAGTGAATCACCGGACC...AGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
3UTR-3UTR CCA 90 bp GCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTGCTGCCTGCAGGTGCTaGAGGTCCGGTGATTCACTG +
Preference number: 2 (lower is better)
Translates to: ALPLQFKFLEWLSVATCLAACRC*RSGDSL
Trigger: CAGTGAATCACCGGACCTCCAGCACCTGCAGGCAGC...AAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
3UTR-3UTR CCA 90 bp GTGTGGACTCAGTCGAACCATAGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTCTGGGTTCCTGGAGTaGGTGGGTCGAAGCTCCACT +
Preference number: 2 (lower is better)
Translates to: VWTQSNHRAPGPLASGQQSGFLE*VGRSST
Trigger: AGTGGAGCTTCGACCCACCCACTCCAGGAACCCAGA...CTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCTATGGTTCGACTGAGTCCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
3UTR-3UTR CCA 90 bp ACCCTGCTCTGGGGACCACCAGGAAGGCTGGTCATGCCCGCTTTGTTCCCAGGAAGGACAGAGCCCTTTTaGGATGGCCAGCACTACCCA +
Preference number: 2 (lower is better)
Translates to: TLLWGPPGRLVMPALFPGRTEPF*DGQHYP
Trigger: TGGGTAGTGCTGGCCATCCCAAAAGGGCTCTGTCCT...TCCTGGGAACAAAGCGGGCATGACCAGCCTTCCTGGTGGTCCCCAGAGCAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617732.1
3UTR-3UTR TCA 90 bp CTGGCAGAGGCTTCTCAGGGTGGCTGCTGGGCTCATGAGAGTTCTCAGGGTCCAAGGTTCCTTTCCAGGTaGGCAGCTGCTCCATCCGAA +
Preference number: 2 (lower is better)
Translates to: LAEASQGGCWAHESSQGPRFLSR*AAAPSE
Trigger: TTCGGATGGAGCAGCTGCTCACCTGGAAAGGAACCT...TGGACCCTGAGAACTCTCATGAGCCCAGCAGCCACCCTGAGAAGCCTCTGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617732.1
3UTR-3UTR GCA 90 bp GTGTGGACTCAGTCGAACCATAGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGCACTGGCTCTGCCCCTaGAGTTCAAGTTCCTGGAGT +
Preference number: 2 (lower is better)
Translates to: VWTQSNHRAPGPLASGQQHWLCP*SSSSWS
Trigger: ACTCCAGGAACTTGAACTGCAGGGGCAGAGCCAGTG...CTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCTATGGTTCGACTGAGTCCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
3UTR-3UTR GCA 90 bp TTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCCAAGCTGCCTGCAGGTaGTGGAGGTCCGGTGATTCA +
Preference number: 2 (lower is better)
Translates to: FLEWVGRSSTRGRNFQAAQAACR*WRSGDS
Trigger: TGAATCACCGGACCTCCAGCACCTGCAGGCAGCTTG...GGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
3UTR-3UTR GCA 90 bp TCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGAGACACACCAGACTCCCAGGGGGTCAGGCGAGACTaGTGGCAGAGGCTTCTCAGG +
Preference number: 2 (lower is better)
Translates to: STELGPWKLHVGDTPDSQGVRRD*WQRLLR
Trigger: CCTGAGAAGCCTCTGCCAGCAGTCTCGCCTGACCCC...CTGGGAGTCTGGTGTGTCTCCTACATGCAATTTCCACGGACCCAGCTCTGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617732.1
3UTR-3UTR CCA 90 bp AGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGGTCCGGTGATTCACTaGCTCTGCCCCTGCAGTTCA +
Preference number: 2 (lower is better)
Translates to: SGWVEAPLGEETSKLPAGGPVIH*LCPCSS
Trigger: TGAACTGCAGGGGCAGAGCCAGTGAATCACCGGACC...ACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
3UTR-3UTR CCA 90 bp TTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCGGTCCGGTGATTCACTaGCTCTGCCCCTGCAGTTCA +
Preference number: 2 (lower is better)
Translates to: FLEWVGRSSTRGRNFQAAGPVIH*LCPCSS
Trigger: TGAACTGCAGGGGCAGAGCCAGTGAATCACCGGACC...GGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
3UTR-3UTR CCA 90 bp CCTCTCACCAGAGGCAGGATCTTGGCATCTGGACTTGATCTTGGGGGTCAGGCGGGTCCGGTGATTCACTaGCTCTGCCCCTGCAGTTCA +
Preference number: 2 (lower is better)
Translates to: PLTRGRILASGLDLGGQAGPVIH*LCPCSS
Trigger: TGAACTGCAGGGGCAGAGCCAGTGAATCACCGGACC...CGCCTGACCCCCAAGATCAAGTCCAGATGCCAAGATCCTGCCTCTGGTGAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617732.1
3UTR-3UTR CCA 90 bp TGGCCAGCAGTCATGCCCTCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGAGTGGCTCTGGGTTCCTaGAGTGGGTGGGTCGAAGCT +
Preference number: 2 (lower is better)
Translates to: WPAVMPSTELGPWKLHVGVALGS*SGWVEA
Trigger: AGCTTCGACCCACCCACTCCAGGAACCCAGAGCCAC...TCCTACATGCAATTTCCACGGACCCAGCTCTGTGGAGGGCATGACTGCTGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
3UTR-3UTR CCA 90 bp AGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTCATGCCCTCCACAGAGCTGGCAGGAACTTCTAATGTaGCTCTGGGTTCCTGGAGTG +
Preference number: 2 (lower is better)
Translates to: RAPGPLASGQQSCPPQSWQELLM*LWVPGV
Trigger: CACTCCAGGAACCCAGAGCCACATTAGAAGTTCCTG...CCAGCTCTGTGGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
3UTR-3UTR CCA 90 bp AGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTCATGCCCTCCACAGAGCTGGGATGGTTTATTGAGCTaGAGAGTGTGCCCAGCAGTG +
Preference number: 2 (lower is better)
Translates to: RAPGPLASGQQSCPPQSWDGLLS*RVCPAV
Trigger: CACTGCTGGGCACACTCTCCAGCTCAATAAACCATC...CCAGCTCTGTGGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
3UTR-3UTR CCA 90 bp GCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTAGGACCACTAGCTTCTaGCCAGCAGTCATGCCCTCC +
Preference number: 2 (lower is better)
Translates to: ALPLQFKFLEWLSVATCLRTTSF*PAVMPS
Trigger: GGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCT...AAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
3UTR-3UTR CCA 90 bp GCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTGGCTCCAGGGGAGTGTaGACTCAGTCGAACCATAGG +
Preference number: 2 (lower is better)
Translates to: ALPLQFKFLEWLSVATCLGSRGV*TQSNHR
Trigger: CCTATGGTTCGACTGAGTCCACACTCCCCTGGAGCC...AAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
3UTR-3UTR CCA 90 bp GACGCTGAGGAGCATGGCCAGCAGGAAGGTGTCATGGTTTTCAGCCTGCACAGGCTATTGCAAACCCCGTaGCTGTGGCAGGCAGTCAGG +
Preference number: 2 (lower is better)
Translates to: DAEEHGQQEGVMVFSLHRLLQTP*LWQAVR
Trigger: CCTGACTGCCTGCCACAGCCACGGGGTTTGCAATAG...CCTGTGCAGGCTGAAAACCATGACACCTTCCTGCTGGCCATGCTCCTCAGCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617732.1
3UTR-3UTR CCA 90 bp TCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGAGACACACCAGACTCCCAGGCTGTCCAGTGGCTGTaGGGCCCAACTCCATGGGGT +
Preference number: 2 (lower is better)
Translates to: STELGPWKLHVGDTPDSQAVQWL*GPTPWG
Trigger: ACCCCATGGAGTTGGGCCCCACAGCCACTGGACAGC...CTGGGAGTCTGGTGTGTCTCCTACATGCAATTTCCACGGACCCAGCTCTGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617732.1
3UTR-3UTR TCA 90 bp AACCATAGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTCATGCCCTCCACAGGGACTGATGGTTTATTaGGCTGGAGAGTGTGCCCAG +
Preference number: 2 (lower is better)
Translates to: NHRAPGPLASGQQSCPPQGLMVY*AGECAQ
Trigger: CTGGGCACACTCTCCAGCTCAATAAACCATCAGTCC...CTGTGGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCTATGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
3UTR-3UTR TCA 90 bp AGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTCATGCCCTCCACAGAGCTGGCTTTGCTTCTGGGACTaGTGGTTTATTGAGCTGGAG +
Preference number: 2 (lower is better)
Translates to: RAPGPLASGQQSCPPQSWLCFWD*WFIELE
Trigger: CTCCAGCTCAATAAACCATCAGTCCCAGAAGCAAAG...CCAGCTCTGTGGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
3UTR-3UTR TCA 90 bp TTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCGAACTCAGGCTCAAGTaGTCCTCCTGCTTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: FLEWVGRSSTRGRNFQAAELRLK*SSCFSL
Trigger: GAGGCTGAAGCAGGAGGATCACTTGAGCCTGAGTTC...GGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
3UTR-3UTR TCA 90 bp TTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCGGGACTCGAGGCCTGTaGATTCCCGTCTCTTCTGAT +
Preference number: 2 (lower is better)
Translates to: FLEWVGRSSTRGRNFQAAGTRGL*IPVSSD
Trigger: ATCAGAAGAGACGGGAATTCACAGGCCTCGAGTCCC...GGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617732.1
3UTR-3UTR GCA 90 bp TTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCCACTGGCTCTGCCCCTaGAGTTCAAGTTCCTGGAGT +
Preference number: 2 (lower is better)
Translates to: FLEWVGRSSTRGRNFQAAHWLCP*SSSSWS
Trigger: ACTCCAGGAACTTGAACTGCAGGGGCAGAGCCAGTG...GGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
3UTR-3UTR GCA 90 bp CCTCTCACCAGAGGCAGGATCTTGGCATCTGGACTTGATCTTGGGGGTCAGGCGCACTGGCTCTGCCCCTaGAGTTCAAGTTCCTGGAGT +
Preference number: 2 (lower is better)
Translates to: PLTRGRILASGLDLGGQAHWLCP*SSSSWS
Trigger: ACTCCAGGAACTTGAACTGCAGGGGCAGAGCCAGTG...CGCCTGACCCCCAAGATCAAGTCCAGATGCCAAGATCCTGCCTCTGGTGAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617732.1
3UTR-3UTR GCA 90 bp GCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTCACTGGCTCTGCCCCTaGAGTTCAAGTTCCTGGAGT +
Preference number: 2 (lower is better)
Translates to: ALPLQFKFLEWLSVATCLHWLCP*SSSSWS
Trigger: ACTCCAGGAACTTGAACTGCAGGGGCAGAGCCAGTG...AAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
3UTR-3UTR GCA 90 bp TCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGAGACACACCAGACTCCCAGTCTGGCCAGCAGTCATaGCCTCCACAGAGCTGGGTC +
Preference number: 2 (lower is better)
Translates to: STELGPWKLHVGDTPDSQSGQQS*PPQSWV
Trigger: GACCCAGCTCTGTGGAGGGCATGACTGCTGGCCAGA...CTGGGAGTCTGGTGTGTCTCCTACATGCAATTTCCACGGACCCAGCTCTGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
3UTR-3UTR CCA 90 bp GTGTGGACTCAGTCGAACCATAGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTTCAAGTTCCTGGAGTaGCTGTCAGTGGCCACCTGT +
Preference number: 2 (lower is better)
Translates to: VWTQSNHRAPGPLASGQQFKFLE*LSVATC
Trigger: ACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAA...CTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCTATGGTTCGACTGAGTCCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
3UTR-3UTR CCA 90 bp GAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTTCAAGTTCCTGGAGTaGCTGTCAGTGGCCACCTGT +
Preference number: 2 (lower is better)
Translates to: EWVGRSSTRGRNFQAACRFKFLE*LSVATC
Trigger: ACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAA...CCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
3UTR-3UTR CCA 90 bp GGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTTGCAGTTCAAGTTCCTaGAGTGGCTGTCAGTGGCCA +
Preference number: 2 (lower is better)
Translates to: GWVEAPLGEETSKLPAGACSSSS*SGCQWP
Trigger: TGGCCACTGACAGCCACTCCAGGAACTTGAACTGCA...AGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
3UTR-3UTR CCA 90 bp GCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTCTTCTAATGTGGCTCTaGGTTCCTGGAGTGGGTGGG +
Preference number: 2 (lower is better)
Translates to: ALPLQFKFLEWLSVATCLLLMWL*VPGVGG
Trigger: CCCACCCACTCCAGGAACCCAGAGCCACATTAGAAG...AAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
3UTR-3UTR CCA 90 bp ACCCTGCTCTGGGGACCACCAGGAAGGCTGGTCATGCCCGCTTTGTTCCCAGGAGATGGTTTATTGAGCTaGAGAGTGTGCCCAGCAGTG +
Preference number: 2 (lower is better)
Translates to: TLLWGPPGRLVMPALFPGDGLLS*RVCPAV
Trigger: CACTGCTGGGCACACTCTCCAGCTCAATAAACCATC...TCCTGGGAACAAAGCGGGCATGACCAGCCTTCCTGGTGGTCCCCAGAGCAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617732.1
3UTR-3UTR CCA 90 bp CCCTCAGGAACTTCTAATGTGGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTAGGACCACTAGCTTCTaGCCAGCAGTCATGCCCTCC +
Preference number: 2 (lower is better)
Translates to: PSGTSNVALGSWSGWVEARTTSF*PAVMPS
Trigger: GGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCT...AGCTTCGACCCACCCACTCCAGGAACCCAGAGCCACATTAGAAGTTCCTGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
3UTR-3UTR CCA 90 bp GTGACCTTTGCTTCTGGGACTGATGGTTTATTGAGCTGGAGAGTGTGCCCAGCAGGGTTGAGAAGTCCTTaGAGCCCCGGGGTGGCCAGG +
Preference number: 2 (lower is better)
Translates to: VTFASGTDGLLSWRVCPAGLRSP*SPGVAR
Trigger: CCTGGCCACCCCGGGGCTCCAAGGACTTCTCAACCC...TGCTGGGCACACTCTCCAGCTCAATAAACCATCAGTCCCAGAAGCAAAGGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617732.1
3UTR CAA 90 bp TTCTGGCCAGCAGTCATGCCCTCCACAGAGCTGGGTCCGTGGAAATaGCATGTAGGAGACACACCAGACTCCCAGGACAGAGCCCTTTTG +
Preference number: 2 (lower is better)
Translates to: FWPAVMPSTELGPWK*HVGDTPDSQDRALL
Trigger: CAAAAGGGCTCTGTCCTGGGAGTCTGGTGTGTCTCCTACATGCAATTTCCACGGACCCAGCTCTGTGGAGGGCATGACTGCTGGCCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
3UTR-3UTR TCA 90 bp TTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCGGACTGATGGTTTATTaGGCTGGAGAGTGTGCCCAG +
Preference number: 2 (lower is better)
Translates to: FLEWVGRSSTRGRNFQAAGLMVY*AGECAQ
Trigger: CTGGGCACACTCTCCAGCTCAATAAACCATCAGTCC...GGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
3UTR-3UTR GCA 90 bp TGGCCAGCAGTCATGCCCTCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGATTGAGCTGGAGAGTGTaGCCAGCAGTGTTCTCCAGC +
Preference number: 2 (lower is better)
Translates to: WPAVMPSTELGPWKLHVGLSWRV*PAVFSS
Trigger: GCTGGAGAACACTGCTGGGCACACTCTCCAGCTCAA...TCCTACATGCAATTTCCACGGACCCAGCTCTGTGGAGGGCATGACTGCTGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
3UTR-3UTR GCA 90 bp CTGTGGCCACAGGTTCCTTTCCAGGTGAGCAGCTGCTCCATCCGAAAGATCTCGTTGAGCTGGAGAGTGTaGCCAGCAGTGTTCTCCAGC +
Preference number: 2 (lower is better)
Translates to: LWPQVPFQVSSCSIRKISLSWRV*PAVFSS
Trigger: GCTGGAGAACACTGCTGGGCACACTCTCCAGCTCAA...CGAGATCTTTCGGATGGAGCAGCTGCTCACCTGGAAAGGAACCTGTGGCCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617732.1
3UTR-3UTR GCA 90 bp TTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCGCCACCATAGCTCACTaGAGTGTTGAACTCAGGCTC +
Preference number: 2 (lower is better)
Translates to: FLEWVGRSSTRGRNFQAAATIAH*SVELRL
Trigger: GAGCCTGAGTTCAACACTGCAGTGAGCTATGGTGGC...GGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
3UTR-3UTR CCA 90 bp TTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTTCAAGTTCCTGGAGTaGCTGTCAGTGGCCACCTGT +
Preference number: 2 (lower is better)
Translates to: FLEWVGRSSTRGRNFQAAFKFLE*LSVATC
Trigger: ACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAA...GGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
3UTR-3UTR CCA 90 bp CCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTGATTTTCAAGTTCCTGGAGTaGCTGTCAGTGGCCACCTGT +
Preference number: 2 (lower is better)
Translates to: PLGEETSKLPAGAGGPVIFKFLE*LSVATC
Trigger: ACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAA...AATCACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
3UTR-3UTR CCA 90 bp CACACAGAATGGGGGAGAGGCTGTCAGATTCTGAGCTCCAGAACCTCAGGTGTAGTGGCTCTGGGTTCCTaGAGTGGGTGGGTCGAAGCT +
Preference number: 2 (lower is better)
Translates to: HTEWGRGCQILSSRTSGVVALGS*SGWVEA
Trigger: AGCTTCGACCCACCCACTCCAGGAACCCAGAGCCAC...TACACCTGAGGTTCTGGAGCTCAGAATCTGACAGCCTCTCCCCCATTCTGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
3UTR-3UTR CCA 90 bp CTGGCAGAGGCTTCTCAGGGTGGCTGCTGGGCTCATGAGAGTTCTCAGGGTCCACAGGAACTTCTAATGTaGCTCTGGGTTCCTGGAGTG +
Preference number: 2 (lower is better)
Translates to: LAEASQGGCWAHESSQGPQELLM*LWVPGV
Trigger: CACTCCAGGAACCCAGAGCCACATTAGAAGTTCCTG...TGGACCCTGAGAACTCTCATGAGCCCAGCAGCCACCCTGAGAAGCCTCTGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617732.1
3UTR-3UTR CCA 90 bp CCCTCAGGAACTTCTAATGTGGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTAGGACAGAGCCCTTTTaGGATGGCCAGCACTACCCA +
Preference number: 2 (lower is better)
Translates to: PSGTSNVALGSWSGWVEARTEPF*DGQHYP
Trigger: TGGGTAGTGCTGGCCATCCCAAAAGGGCTCTGTCCT...AGCTTCGACCCACCCACTCCAGGAACCCAGAGCCACATTAGAAGTTCCTGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
3UTR-3UTR CCA 90 bp TGGCCAGCAGTCATGCCCTCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGAAGGACAGAGCCCTTTTaGGATGGCCAGCACTACCCA +
Preference number: 2 (lower is better)
Translates to: WPAVMPSTELGPWKLHVGRTEPF*DGQHYP
Trigger: TGGGTAGTGCTGGCCATCCCAAAAGGGCTCTGTCCT...TCCTACATGCAATTTCCACGGACCCAGCTCTGTGGAGGGCATGACTGCTGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
3UTR-3UTR CCA 90 bp GTGTGGACTCAGTCGAACCATAGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGACAGAGCTGGGTCCGTaGAAATTGCATGTAGGAGAC +
Preference number: 2 (lower is better)
Translates to: VWTQSNHRAPGPLASGQQTELGP*KLHVGD
Trigger: GTCTCCTACATGCAATTTCCACGGACCCAGCTCTGT...CTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCTATGGTTCGACTGAGTCCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
3UTR-3UTR TCA 90 bp GCGAGACTGCTGGCAGAGGCTTCTCAGGGTGGCTGCTGGGCTCATGAGAGTTCTCTTTGCTTCTGGGACTaGTGGTTTATTGAGCTGGAG +
Preference number: 2 (lower is better)
Translates to: ARLLAEASQGGCWAHESSLCFWD*WFIELE
Trigger: CTCCAGCTCAATAAACCATCAGTCCCAGAAGCAAAG...AGAACTCTCATGAGCCCAGCAGCCACCCTGAGAAGCCTCTGCCAGCAGTCTCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617732.1
3UTR-3UTR CCA 90 bp TGGCCAGCAGTCATGCCCTCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGATGCAGTTCAAGTTCCTaGAGTGGCTGTCAGTGGCCA +
Preference number: 2 (lower is better)
Translates to: WPAVMPSTELGPWKLHVGCSSSS*SGCQWP
Trigger: TGGCCACTGACAGCCACTCCAGGAACTTGAACTGCA...TCCTACATGCAATTTCCACGGACCCAGCTCTGTGGAGGGCATGACTGCTGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
3UTR-3UTR CCA 90 bp CCCTCAGGAACTTCTAATGTGGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTTGCAGTTCAAGTTCCTaGAGTGGCTGTCAGTGGCCA +
Preference number: 2 (lower is better)
Translates to: PSGTSNVALGSWSGWVEACSSSS*SGCQWP
Trigger: TGGCCACTGACAGCCACTCCAGGAACTTGAACTGCA...AGCTTCGACCCACCCACTCCAGGAACCCAGAGCCACATTAGAAGTTCCTGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
3UTR-3UTR CCA 90 bp GTGACCTTTGCTTCTGGGACTGATGGTTTATTGAGCTGGAGAGTGTGCCCAGCAGTGGCTCTGGGTTCCTaGAGTGGGTGGGTCGAAGCT +
Preference number: 2 (lower is better)
Translates to: VTFASGTDGLLSWRVCPAVALGS*SGWVEA
Trigger: AGCTTCGACCCACCCACTCCAGGAACCCAGAGCCAC...TGCTGGGCACACTCTCCAGCTCAATAAACCATCAGTCCCAGAAGCAAAGGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
3UTR-3UTR CCA 90 bp TCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGAGACACACCAGACTCCCAGCTTCTAATGTGGCTCTaGGTTCCTGGAGTGGGTGGG +
Preference number: 2 (lower is better)
Translates to: STELGPWKLHVGDTPDSQLLMWL*VPGVGG
Trigger: CCCACCCACTCCAGGAACCCAGAGCCACATTAGAAG...CTGGGAGTCTGGTGTGTCTCCTACATGCAATTTCCACGGACCCAGCTCTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
3UTR-3UTR CCA 90 bp CACACAGAATGGGGGAGAGGCTGTCAGATTCTGAGCTCCAGAACCTCAGGTGTAAGGACCACTAGCTTCTaGCCAGCAGTCATGCCCTCC +
Preference number: 2 (lower is better)
Translates to: HTEWGRGCQILSSRTSGVRTTSF*PAVMPS
Trigger: GGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCT...TACACCTGAGGTTCTGGAGCTCAGAATCTGACAGCCTCTCCCCCATTCTGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
3UTR-3UTR TCA 90 bp GTGACCTTTGCTTCTGGGACTGATGGTTTATTGAGCTGGAGAGTGTGCCCAGCAAGGTCAGGGGCTGTGTaGCCTTTGCTTCTGGGACTG +
Preference number: 2 (lower is better)
Translates to: VTFASGTDGLLSWRVCPARSGAV*PLLLGL
Trigger: CAGTCCCAGAAGCAAAGGTCACACAGCCCCTGACCT...TGCTGGGCACACTCTCCAGCTCAATAAACCATCAGTCCCAGAAGCAAAGGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
3UTR-3UTR TCA 90 bp AGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCTCCCTGCTGGCCTCTGGTaGTCCTCCTACCCCGGCTTC +
Preference number: 2 (lower is better)
Translates to: SGCQWPPVFKSVHFRSYLPAGLW*SSYPGF
Trigger: GAAGCCGGGGTAGGAGGATCACCAGAGGCCAGCAGG...GAGGTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
3UTR-3UTR GCA 90 bp CACAGAATGGGGGAGAGGCTGTCAGATTCTGAGCTCCAGAACCTCAGGTGTAGCGTGATTCACTGGCTCTaGCCCTGCAGTTCAAGTTCC +
Preference number: 2 (lower is better)
Translates to: HRMGERLSDSELQNLRCSVIHWL*PCSSSS
Trigger: GGAACTTGAACTGCAGGGGCAGAGCCAGTGAATCAC...GCTACACCTGAGGTTCTGGAGCTCAGAATCTGACAGCCTCTCCCCCATTCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
3UTR-3UTR CCA 90 bp CCCTCAGGAACTTCTAATGTGGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTACAGAGCTGGGTCCGTaGAAATTGCATGTAGGAGAC +
Preference number: 2 (lower is better)
Translates to: PSGTSNVALGSWSGWVEATELGP*KLHVGD
Trigger: GTCTCCTACATGCAATTTCCACGGACCCAGCTCTGT...AGCTTCGACCCACCCACTCCAGGAACCCAGAGCCACATTAGAAGTTCCTGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
3UTR-3UTR TCA 90 bp GTGACCTTTGCTTCTGGGACTGATGGTTTATTGAGCTGGAGAGTGTGCCCAGCAGAACTCAGGCTCAAGTaGTCCTCCTGCTTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: VTFASGTDGLLSWRVCPAELRLK*SSCFSL
Trigger: GAGGCTGAAGCAGGAGGATCACTTGAGCCTGAGTTC...TGCTGGGCACACTCTCCAGCTCAATAAACCATCAGTCCCAGAAGCAAAGGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
3UTR-3UTR GCA 90 bp AGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCTCACGCAGGGTCCCTTCTaGAGCCCCAGCTGCATCGCT +
Preference number: 2 (lower is better)
Translates to: SGCQWPPVFKSVHFRSYLTQGPF*SPSCIA
Trigger: AGCGATGCAGCTGGGGCTGCAGAAGGGACCCTGCGT...GAGGTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617732.1
3UTR-3UTR CCA 90 bp CACAGAATGGGGGAGAGGCTGTCAGATTCTGAGCTCCAGAACCTCAGGTGTAGCGATGGTTTATTGAGCTaGAGAGTGTGCCCAGCAGTG +
Preference number: 2 (lower is better)
Translates to: HRMGERLSDSELQNLRCSDGLLS*RVCPAV
Trigger: CACTGCTGGGCACACTCTCCAGCTCAATAAACCATC...GCTACACCTGAGGTTCTGGAGCTCAGAATCTGACAGCCTCTCCCCCATTCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
3UTR-3UTR TCA 90 bp TGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCCTGCTTCAGCCTCCTaGGCAGCTAGGCCTACAGGT +
Preference number: 2 (lower is better)
Translates to: WSGCQWPPVFKSVHFRSYPASAS*AARPTG
Trigger: ACCTGTAGGCCTAGCTGCTCAGGAGGCTGAAGCAGG...GTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
3UTR-3UTR CCA 90 bp TGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCACTGGGATTGGGGGTaGGGGCTCAGGAACCACCTA +
Preference number: 2 (lower is better)
Translates to: WSGCQWPPVFKSVHFRSYHWDWG*GLRNHL
Trigger: TAGGTGGTTCCTGAGCCCCCACCCCCAATCCCAGTG...GTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
3UTR-3UTR TCA 90 bp AGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCTCAGGTCAGGGGCTGTGTaGCCTTTGCTTCTGGGACTG +
Preference number: 2 (lower is better)
Translates to: SGCQWPPVFKSVHFRSYLRSGAV*PLLLGL
Trigger: CAGTCCCAGAAGCAAAGGTCACACAGCCCCTGACCT...GAGGTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
3UTR-3UTR GCA 90 bp TGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCAAGCTGCCTGCAGGTaGTGGAGGTCCGGTGATTCA +
Preference number: 2 (lower is better)
Translates to: WSGCQWPPVFKSVHFRSYQAACR*WRSGDS
Trigger: TGAATCACCGGACCTCCAGCACCTGCAGGCAGCTTG...GTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
3UTR-3UTR GCA 90 bp TGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACAACTTCCAAGCTGCCTaGAGGTGCTGGAGGTCCGGT +
Preference number: 2 (lower is better)
Translates to: WSGCQWPPVFKSVHFRSYNFQAA*RCWRSG
Trigger: ACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTT...GTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
3UTR-3UTR GCA 90 bp CACAGAATGGGGGAGAGGCTGTCAGATTCTGAGCTCCAGAACCTCAGGTGTAGCAAAATTATGTTTGTTTaGAGAGGCCAGCCAGGCTCC +
Preference number: 2 (lower is better)
Translates to: HRMGERLSDSELQNLRCSKIMFV*RGQPGS
Trigger: GGAGCCTGGCTGGCCTCTGCAAACAAACATAATTTT...GCTACACCTGAGGTTCTGGAGCTCAGAATCTGACAGCCTCTCCCCCATTCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
3UTR-3UTR CCA 90 bp TTCCCGTCTCTTCTGATTTGGAGGGCTATAGATACAGCATTCCCACTCCCATCCTGCAGTTCAAGTTCCTaGAGTGGCTGTCAGTGGCCA +
Preference number: 2 (lower is better)
Translates to: FPSLLIWRAIDTAFPLPSCSSSS*SGCQWP
Trigger: TGGCCACTGACAGCCACTCCAGGAACTTGAACTGCA...GGATGGGAGTGGGAATGCTGTATCTATAGCCCTCCAAATCAGAAGAGACGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617732.1
3UTR-3UTR CCA 90 bp TGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACTCTGGGTTCCTGGAGTaGGTGGGTCGAAGCTCCACT +
Preference number: 2 (lower is better)
Translates to: WSGCQWPPVFKSVHFRSYSGFLE*VGRSST
Trigger: AGTGGAGCTTCGACCCACCCACTCCAGGAACCCAGA...GTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
3UTR-3UTR CCA 90 bp AGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCTCGGCTCCAGGGGAGTGTaGACTCAGTCGAACCATAGG +
Preference number: 2 (lower is better)
Translates to: SGCQWPPVFKSVHFRSYLGSRGV*TQSNHR
Trigger: CCTATGGTTCGACTGAGTCCACACTCCCCTGGAGCC...GAGGTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
3UTR-3UTR TCA 90 bp GTGACCTTTGCTTCTGGGACTGATGGTTTATTGAGCTGGAGAGTGTGCCCAGCACTTTGCTTCTGGGACTaGTGGTTTATTGAGCTGGAG +
Preference number: 2 (lower is better)
Translates to: VTFASGTDGLLSWRVCPALCFWD*WFIELE
Trigger: CTCCAGCTCAATAAACCATCAGTCCCAGAAGCAAAG...TGCTGGGCACACTCTCCAGCTCAATAAACCATCAGTCCCAGAAGCAAAGGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
3UTR-3UTR CCA 90 bp AGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCTCCTTCTAATGTGGCTCTaGGTTCCTGGAGTGGGTGGG +
Preference number: 2 (lower is better)
Translates to: SGCQWPPVFKSVHFRSYLLLMWL*VPGVGG
Trigger: CCCACCCACTCCAGGAACCCAGAGCCACATTAGAAG...GAGGTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
3UTR-3UTR CCA 90 bp TGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACTTCCCAGGATCCCTGTaGCCACAGGTTCCTTTCCAG +
Preference number: 2 (lower is better)
Translates to: WSGCQWPPVFKSVHFRSYFPGSL*PQVPFQ
Trigger: CTGGAAAGGAACCTGTGGCCACAGGGATCCTGGGAA...GTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617732.1
3UTR-3UTR GCA 90 bp GTGACCTTTGCTTCTGGGACTGATGGTTTATTGAGCTGGAGAGTGTGCCCAGCAAAAATTATGTTTGTTTaGAGAGGCCAGCCAGGCTCC +
Preference number: 2 (lower is better)
Translates to: VTFASGTDGLLSWRVCPAKIMFV*RGQPGS
Trigger: GGAGCCTGGCTGGCCTCTGCAAACAAACATAATTTT...TGCTGGGCACACTCTCCAGCTCAATAAACCATCAGTCCCAGAAGCAAAGGTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
3UTR-3UTR CCA 90 bp AGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCTCCCGACACACACAGAATaGGGGAGAGGCTGTCAGATT +
Preference number: 2 (lower is better)
Translates to: SGCQWPPVFKSVHFRSYLPTHTE*GRGCQI
Trigger: AATCTGACAGCCTCTCCCCCATTCTGTGTGTGTCGG...GAGGTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
3UTR-3UTR TCA 90 bp AGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCTCCTTTGCTTCTGGGACTaGTGGTTTATTGAGCTGGAG +
Preference number: 2 (lower is better)
Translates to: SGCQWPPVFKSVHFRSYLLCFWD*WFIELE
Trigger: CTCCAGCTCAATAAACCATCAGTCCCAGAAGCAAAG...GAGGTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
3UTR-3UTR GCA 90 bp AGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCTCAAAATTATGTTTGTTTaGAGAGGCCAGCCAGGCTCC +
Preference number: 2 (lower is better)
Translates to: SGCQWPPVFKSVHFRSYLKIMFV*RGQPGS
Trigger: GGAGCCTGGCTGGCCTCTGCAAACAAACATAATTTT...GAGGTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
3UTR CCA 72 bp GCCAGGGCTGTCCAGTGGCTGTGGGGCCCAACTCCATaGGGTGAACGCCGCCCAGGGGGTGGTCCCTGTGTG +
Preference number: 3 (lower is better)
Translates to: ARAVQWLWGPTP*GERRPGGGPCV
Trigger: CACACAGGGACCACCCCCTGGGCGGCGTTCACCCCATGGAGTTGGGCCCCACAGCCACTGGACAGCCCTGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617732.1
3UTR CCA 72 bp TCTGCAGCCCCAGCTGCATCGCTGCAGATGGGCTCCTaGGAGTCGGTAGCAACACCAGGCCAGGCCGGCCCC +
Preference number: 3 (lower is better)
Translates to: SAAPAASLQMGS*ESVATPGQAGP
Trigger: GGGGCCGGCCTGGCCTGGTGTTGCTACCGACTCCCAGGAGCCCATCTGCAGCGATGCAGCTGGGGCTGCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617732.1
3UTR GCA 72 bp GGCCATCTTTGGGGCCACTGCACGCAGGGTCCCTTCTaGAGCCCCAGCTGCATCGCTGCAGATGGGCTCCTG +
Preference number: 3 (lower is better)
Translates to: GHLWGHCTQGPF*SPSCIAADGLL
Trigger: CAGGAGCCCATCTGCAGCGATGCAGCTGGGGCTGCAGAAGGGACCCTGCGTGCAGTGGCCCCAAAGATGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617732.1
3UTR GCA 72 bp CAGGCGAGACTGCTGGCAGAGGCTTCTCAGGGTGGCTaGTGGGCTCATGAGAGTTCTCAGGGTCCAGGGGCC +
Preference number: 3 (lower is better)
Translates to: QARLLAEASQGG*WAHESSQGPGA
Trigger: GGCCCCTGGACCCTGAGAACTCTCATGAGCCCAGCAGCCACCCTGAGAAGCCTCTGCCAGCAGTCTCGCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617732.1
3UTR CCA 72 bp GCGAGACTGCTGGCAGAGGCTTCTCAGGGTGGCTGCTaGGCTCATGAGAGTTCTCAGGGTCCAGGGGCCAGG +
Preference number: 3 (lower is better)
Translates to: ARLLAEASQGGC*AHESSQGPGAR
Trigger: CCTGGCCCCTGGACCCTGAGAACTCTCATGAGCCCAGCAGCCACCCTGAGAAGCCTCTGCCAGCAGTCTCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617732.1
3UTR TCA 72 bp GGTGAGCAGCTGCTCCATCCGAAAGATCTCGTGGGTTaGGAAGTCCTTGGAGCCCCGGGGTGGCCAGGGACG +
Preference number: 3 (lower is better)
Translates to: GEQLLHPKDLVG*EVLGAPGWPGT
Trigger: CGTCCCTGGCCACCCCGGGGCTCCAAGGACTTCTCAACCCACGAGATCTTTCGGATGGAGCAGCTGCTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617732.1
3UTR-3UTR CAA 90 bp GGGCTGTCCAGTGGCTGTGGGGCCCAACTCCATGGGGTGAACGCCGCCCAGGGGCCCGTCTCTTCTGATTaGGAGGGCTATAGATACAGC +
Preference number: 3 (lower is better)
Translates to: GLSSGCGAQLHGVNAAQGPVSSD*EGYRYS
Trigger: GCTGTATCTATAGCCCTCCAAATCAGAAGAGACGGG...CCCCTGGGCGGCGTTCACCCCATGGAGTTGGGCCCCACAGCCACTGGACAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000617732.1
3UTR-3UTR CAA 90 bp GTGTGGACTCAGTCGAACCATAGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGCAGGACAGAGCCCTTTaGGGATGGCCAGCACTACCC +
Preference number: 3 (lower is better)
Translates to: VWTQSNHRAPGPLASGQQQDRAL*GWPALP
Trigger: GGGTAGTGCTGGCCATCCCAAAAGGGCTCTGTCCTG...CTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCTATGGTTCGACTGAGTCCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
3UTR-3UTR CAA 90 bp GGTCCCTTCTGCAGCCCCAGCTGCATCGCTGCAGATGGGCTCCTGGGAGTCGGTCAGTTATGGTTGCTATaGCAAACCCCGTGGCTGTGG +
Preference number: 3 (lower is better)
Translates to: GPFCSPSCIAADGLLGVGQLWLL*QTPWLW
Trigger: CCACAGCCACGGGGTTTGCAATAGCAACCATAACTG...ACCGACTCCCAGGAGCCCATCTGCAGCGATGCAGCTGGGGCTGCAGAAGGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617732.1
3UTR-3UTR CAA 90 bp CCCTCAGGAACTTCTAATGTGGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTCTGTGTGGGCCATCTTaGGGGCCACTGCACGCAGGG +
Preference number: 3 (lower is better)
Translates to: PSGTSNVALGSWSGWVEALCGPS*GPLHAG
Trigger: CCCTGCGTGCAGTGGCCCCAAAGATGGCCCACACAG...AGCTTCGACCCACCCACTCCAGGAACCCAGAGCCACATTAGAAGTTCCTGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617732.1
3UTR GCA 72 bp CCTGCAGGTGCTGGAGGTCCGGTGATTCACTGGCTCTaGCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAG +
Preference number: 3 (lower is better)
Translates to: PAGAGGPVIHWL*PCSSSSWSGCQ
Trigger: CTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGCCAGTGAATCACCGGACCTCCAGCACCTGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
3UTR GCA 72 bp TCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTaGTGGAGGTCCGGTGATTCACTGGCTCTGCCCCTG +
Preference number: 3 (lower is better)
Translates to: STRGRNFQAACR*WRSGDSLALPL
Trigger: CAGGGGCAGAGCCAGTGAATCACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
3UTR CCA 72 bp AAGCTGCCTGCAGGTGCTGGAGGTCCGGTGATTCACTaGCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGC +
Preference number: 3 (lower is better)
Translates to: KLPAGAGGPVIH*LCPCSSSSWSG
Trigger: GCCACTCCAGGAACTTGAACTGCAGGGGCAGAGCCAGTGAATCACCGGACCTCCAGCACCTGCAGGCAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
3UTR CCA 72 bp TTCCAGGTGAGCAGCTGCTCCATCCGAAAGATCTCGTaGGTTGAGAAGTCCTTGGAGCCCCGGGGTGGCCAG +
Preference number: 3 (lower is better)
Translates to: FQVSSCSIRKIS*VEKSLEPRGGQ
Trigger: CTGGCCACCCCGGGGCTCCAAGGACTTCTCAACCCACGAGATCTTTCGGATGGAGCAGCTGCTCACCTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617732.1
3UTR CCA 72 bp AGGCTGGTCATGCCCGCTTTGTTCCCAGGATCCCTGTaGCCACAGGTTCCTTTCCAGGTGAGCAGCTGCTCC +
Preference number: 3 (lower is better)
Translates to: RLVMPALFPGSL*PQVPFQVSSCS
Trigger: GGAGCAGCTGCTCACCTGGAAAGGAACCTGTGGCCACAGGGATCCTGGGAACAAAGCGGGCATGACCAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617732.1
3UTR CCA 72 bp CATCTGGACTTGATCTTGGGGGTCAGGCGAGACTGCTaGCAGAGGCTTCTCAGGGTGGCTGCTGGGCTCATG +
Preference number: 3 (lower is better)
Translates to: HLDLILGVRRDC*QRLLRVAAGLM
Trigger: CATGAGCCCAGCAGCCACCCTGAGAAGCCTCTGCCAGCAGTCTCGCCTGACCCCCAAGATCAAGTCCAGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617732.1
3UTR-3UTR CAA 90 bp AGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTCATGCCCTCCACAGAGCTGGGGGACTGATGGTTTATaGAGCTGGAGAGTGTGCCCA +
Preference number: 3 (lower is better)
Translates to: RAPGPLASGQQSCPPQSWGTDGL*SWRVCP
Trigger: TGGGCACACTCTCCAGCTCAATAAACCATCAGTCCC...CCAGCTCTGTGGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
3UTR-3UTR CAA 90 bp ACCCTGCTCTGGGGACCACCAGGAAGGCTGGTCATGCCCGCTTTGTTCCCAGGAGAAAGATCTCGTGGGTaGAGAAGTCCTTGGAGCCCC +
Preference number: 3 (lower is better)
Translates to: TLLWGPPGRLVMPALFPGERSRG*RSPWSP
Trigger: GGGGCTCCAAGGACTTCTCAACCCACGAGATCTTTC...TCCTGGGAACAAAGCGGGCATGACCAGCCTTCCTGGTGGTCCCCAGAGCAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617732.1
3UTR GCA 72 bp CGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTaGAGGTGCTGGAGGTCCGGTGATTCACTGGCTCTG +
Preference number: 3 (lower is better)
Translates to: RSSTRGRNFQAA*RCWRSGDSLAL
Trigger: CAGAGCCAGTGAATCACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
3UTR CCA 72 bp GCTCCATCCGAAAGATCTCGTGGGTTGAGAAGTCCTTaGAGCCCCGGGGTGGCCAGGGACGCAGATAATAGC +
Preference number: 3 (lower is better)
Translates to: APSERSRGLRSP*SPGVARDADNS
Trigger: GCTATTATCTGCGTCCCTGGCCACCCCGGGGCTCCAAGGACTTCTCAACCCACGAGATCTTTCGGATGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617732.1
3UTR-3UTR CAA 90 bp TCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGAGACACACCAGACTCCCAGCAGGACAGAGCCCTTTaGGGATGGCCAGCACTACCC +
Preference number: 3 (lower is better)
Translates to: STELGPWKLHVGDTPDSQQDRAL*GWPALP
Trigger: GGGTAGTGCTGGCCATCCCAAAAGGGCTCTGTCCTG...CTGGGAGTCTGGTGTGTCTCCTACATGCAATTTCCACGGACCCAGCTCTGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
3UTR-3UTR CAA 90 bp TTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCGCCCCTTACTCGCCCTaGGTAGTGGCAATGATCCTA +
Preference number: 3 (lower is better)
Translates to: FLEWVGRSSTRGRNFQAAAPYSP*VVAMIL
Trigger: TAGGATCATTGCCACTACCAAGGGCGAGTAAGGGGC...GGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617732.1
3UTR TCA 72 bp GCGCTGAAGCTCGTGGAAGCTGCTGGGCTTGAGCCCTaGCCACCAATCCCAGCTCCCAGAAGGAAGTTTAAC +
Preference number: 3 (lower is better)
Translates to: ALKLVEAAGLEP*PPIPAPRRKFN
Trigger: GTTAAACTTCCTTCTGGGAGCTGGGATTGGTGGTCAGGGCTCAAGCCCAGCAGCTTCCACGAGCTTCAGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617732.1
3UTR CCA 72 bp TGGCCAGCAGTCATGCCCTCCACAGAGCTGGGTCCGTaGAAATTGCATGTAGGAGACACACCAGACTCCCAG +
Preference number: 3 (lower is better)
Translates to: WPAVMPSTELGP*KLHVGDTPDSQ
Trigger: CTGGGAGTCTGGTGTGTCTCCTACATGCAATTTCCACGGACCCAGCTCTGTGGAGGGCATGACTGCTGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
3UTR-3UTR CAA 90 bp CCTCTCACCAGAGGCAGGATCTTGGCATCTGGACTTGATCTTGGGGGTCAGGCGGGGACTGATGGTTTATaGAGCTGGAGAGTGTGCCCA +
Preference number: 3 (lower is better)
Translates to: PLTRGRILASGLDLGGQAGTDGL*SWRVCP
Trigger: TGGGCACACTCTCCAGCTCAATAAACCATCAGTCCC...CGCCTGACCCCCAAGATCAAGTCCAGATGCCAAGATCCTGCCTCTGGTGAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617732.1
3UTR GCA 72 bp TCCCTGTGGCCACAGGTTCCTTTCCAGGTGAGCAGCTaGTCCATCCGAAAGATCTCGTGGGTTGAGAAGTCC +
Preference number: 3 (lower is better)
Translates to: SLWPQVPFQVSS*SIRKISWVEKS
Trigger: GGACTTCTCAACCCACGAGATCTTTCGGATGGAGCAGCTGCTCACCTGGAAAGGAACCTGTGGCCACAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617732.1
3UTR TCA 72 bp GGAGGTCAGGGGCTGTGTGACCTTTGCTTCTGGGACTaGTGGTTTATTGAGCTGGAGAGTGTGCCCAGCAGT +
Preference number: 3 (lower is better)
Translates to: GGQGLCDLCFWD*WFIELESVPSS
Trigger: ACTGCTGGGCACACTCTCCAGCTCAATAAACCATCAGTCCCAGAAGCAAAGGTCACACAGCCCCTGACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
3UTR CCA 72 bp GGAACTTCTAATGTGGCTCTGGGTTCCTGGAGTGGGTaGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAG +
Preference number: 3 (lower is better)
Translates to: GTSNVALGSWSG*VEAPLGEETSK
Trigger: CTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAACCCAGAGCCACATTAGAAGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
3UTR CCA 72 bp GTGACCTTTGCTTCTGGGACTGATGGTTTATTGAGCTaGAGAGTGTGCCCAGCAGTGTTCTCCAGCCCTCAG +
Preference number: 3 (lower is better)
Translates to: VTFASGTDGLLS*RVCPAVFSSPQ
Trigger: CTGAGGGCTGGAGAACACTGCTGGGCACACTCTCCAGCTCAATAAACCATCAGTCCCAGAAGCAAAGGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
3UTR-3UTR CAA 90 bp TCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGAGACACACCAGACTCCCAGCAAAATTATGTTTGTTaGCAGAGGCCAGCCAGGCTC +
Preference number: 3 (lower is better)
Translates to: STELGPWKLHVGDTPDSQQNYVC*QRPARL
Trigger: GAGCCTGGCTGGCCTCTGCAAACAAACATAATTTTG...CTGGGAGTCTGGTGTGTCTCCTACATGCAATTTCCACGGACCCAGCTCTGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
3UTR-3UTR CAA 90 bp CACAGAATGGGGGAGAGGCTGTCAGATTCTGAGCTCCAGAACCTCAGGTGTAGCTCCCCAAAATTATGTTaGTTTGCAGAGGCCAGCCAG +
Preference number: 3 (lower is better)
Translates to: HRMGERLSDSELQNLRCSSPKLC*FAEASQ
Trigger: CTGGCTGGCCTCTGCAAACAAACATAATTTTGGGGA...GCTACACCTGAGGTTCTGGAGCTCAGAATCTGACAGCCTCTCCCCCATTCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
3UTR-3UTR CAA 90 bp GGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCTCTCATGGAAGCTGCTGGGCTaGAGCCCTGACCACCAATCC +
Preference number: 3 (lower is better)
Translates to: GCQWPPVFKSVHFRSYLSWKLLG*SPDHQS
Trigger: GGATTGGTGGTCAGGGCTCAAGCCCAGCAGCTTCCA...TGAGAGGTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617732.1
3UTR-3UTR CAA 90 bp AGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCTCGGGACTGATGGTTTATaGAGCTGGAGAGTGTGCCCA +
Preference number: 3 (lower is better)
Translates to: SGCQWPPVFKSVHFRSYLGTDGL*SWRVCP
Trigger: TGGGCACACTCTCCAGCTCAATAAACCATCAGTCCC...GAGGTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
3UTR-3UTR CAA 90 bp TGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACTCCCCAAAATTATGTTaGTTTGCAGAGGCCAGCCAG +
Preference number: 3 (lower is better)
Translates to: WSGCQWPPVFKSVHFRSYSPKLC*FAEASQ
Trigger: CTGGCTGGCCTCTGCAAACAAACATAATTTTGGGGA...GTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR TCA 90 bp GGGCTGTCCAGTGGCTGTGGGGCCCAACTCCATGGGGTGAACGCCGCCCAGGGGCCGGCTCCTCCAGGCTaGCGGTGCGCCAGGGTTGTC +
Preference number: 4 (lower is better)
Translates to: GLSSGCGAQLHGVNAAQGPAPPG*RCARVV
Trigger: GACAACCCTGGCGCACCGTCAGCCTGGAGGAGCCGG...CCCCTGGGCGGCGTTCACCCCATGGAGTTGGGCCCCACAGCCACTGGACAGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR CCA 90 bp AGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTCATGCCCTCCACAGAGCTGGCGGGGTCCGGGGCATTaGAGAGGCAAGCGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: RAPGPLASGQQSCPPQSWRGPGH*RGKRRP
Trigger: GGGGCGGCGCTTGCCTCTCCAATGCCCCGGACCCCG...CCAGCTCTGTGGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR TCA 90 bp AGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTCATGCCCTCCACAGAGCTGGCCGGCTCCTCCAGGCTaGCGGTGCGCCAGGGTTGTC +
Preference number: 4 (lower is better)
Translates to: RAPGPLASGQQSCPPQSWPAPPG*RCARVV
Trigger: GACAACCCTGGCGCACCGTCAGCCTGGAGGAGCCGG...CCAGCTCTGTGGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR TCA 90 bp GGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCGTTGGCGTCCTGCGTaGCGCGGCTGCGGTCCCGCT +
Preference number: 4 (lower is better)
Translates to: GSGFLEWVGRSSTRGRNFRWRPA*RGCGPA
Trigger: AGCGGGACCGCAGCCGCGTCACGCAGGACGCCAACG...GAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAACCCAGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS-3UTR TCA 90 bp GGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCGGTGGCCGCAGCCATaGCGCAGCCTCCGGACTCGG +
Preference number: 4 (lower is better)
Translates to: GSGFLEWVGRSSTRGRNFRWPQP*RSLRTR
Trigger: CCGAGTCCGGAGGCTGCGTCATGGCTGCGGCCACCG...GAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAACCCAGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS-3UTR GCA 90 bp GAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTCTCGGCGCGGCACATaGCCTCGACGGGCGCCAGGC +
Preference number: 4 (lower is better)
Translates to: EWVGRSSTRGRNFQAACRSRRGT*PRRAPG
Trigger: GCCTGGCGCCCGTCGAGGGCATGTGCCGCGCCGAGA...CCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS-3UTR GCA 90 bp AGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTCATGCCCTCCACAGAGCTGGCCAGGCCCCCAGAGCTaGTGGCACTGCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RAPGPLASGQQSCPPQSWPGPQS*WHCCSS
Trigger: GCTGGAGCAGCAGTGCCAGCAGCTCTGGGGGCCTGG...CCAGCTCTGTGGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp GTGTGGACTCAGTCGAACCATAGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGCCGCCCAGGCTGGATTaGGGCCGACCCGTGCCCGGT +
Preference number: 4 (lower is better)
Translates to: VWTQSNHRAPGPLASGQQPPRLD*GRPVPG
Trigger: ACCGGGCACGGGTCGGCCGCAATCCAGCCTGGGCGG...CTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCTATGGTTCGACTGAGTCCACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp AGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTAGCTGCGCGGAGTCGTaGGGCCGCTGCGCCCACAGC +
Preference number: 4 (lower is better)
Translates to: SSTRGRNFQAACRCWRSGSCAES*GRCAHS
Trigger: GCTGTGGGCGCAGCGGCCCCACGACTCCGCGCAGCT...ACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS-3UTR CCA 90 bp TCACTGGCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCCGGCTCCGCCCAGGCTaGATTGCGGCCGACCCGTGC +
Preference number: 4 (lower is better)
Translates to: SLALPLQFKFLEWLSVATRLRPG*IAADPC
Trigger: GCACGGGTCGGCCGCAATCCAGCCTGGGCGGAGCCG...GGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGCCAGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000379861.8
ENST00000619289.4
CDS-3UTR TCA 90 bp TGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGACGTTGGCGTCCTGCGTaGCGCGGCTGCGGTCCCGCT +
Preference number: 4 (lower is better)
Translates to: WVEAPLGEETSKLPAGAGRWRPA*RGCGPA
Trigger: AGCGGGACCGCAGCCGCGTCACGCAGGACGCCAACG...TCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS-3UTR TCA 90 bp AGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTCGGTGGCCGCAGCCATaGCGCAGCCTCCGGACTCGG +
Preference number: 4 (lower is better)
Translates to: SGWVEAPLGEETSKLPAGRWPQP*RSLRTR
Trigger: CCGAGTCCGGAGGCTGCGTCATGGCTGCGGCCACCG...ACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS-3UTR TCA 90 bp GAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGCCCAACTCCATGGGGTaGACGCCGCCCAGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: EWVGRSSTRGRNFQAACRPNSMG*TPPRGW
Trigger: CCACCCCCTGGGCGGCGTTCACCCCATGGAGTTGGG...CCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR TCA 90 bp AACCATAGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTCATGCCCTCCACAGCCCAACTCCATGGGGTaGACGCCGCCCAGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: NHRAPGPLASGQQSCPPQPNSMG*TPPRGW
Trigger: CCACCCCCTGGGCGGCGTTCACCCCATGGAGTTGGG...CTGTGGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCTATGGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR TCA 90 bp AGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTCCCAACTCCATGGGGTaGACGCCGCCCAGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: SSTRGRNFQAACRCWRSGPNSMG*TPPRGW
Trigger: CCACCCCCTGGGCGGCGTTCACCCCATGGAGTTGGG...ACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp AGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTAGCCCCCGGCGCCACTaGAGGAAGGCCCAGAGCGTG +
Preference number: 4 (lower is better)
Translates to: SSTRGRNFQAACRCWRSGSPRRH*RKAQSV
Trigger: CACGCTCTGGGCCTTCCTGCAGTGGCGCCGGGGGCT...ACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS-3UTR GCA 90 bp GCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTCTCGGCGCGGCACATaGCCTCGACGGGCGCCAGGC +
Preference number: 4 (lower is better)
Translates to: ALPLQFKFLEWLSVATCLSRRGT*PRRAPG
Trigger: GCCTGGCGCCCGTCGAGGGCATGTGCCGCGCCGAGA...AAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS-3UTR GCA 90 bp GGGCTGTCCAGTGGCTGTGGGGCCCAACTCCATGGGGTGAACGCCGCCCAGGGGTTGAGCTGGAGAGTGTaGCCAGCAGTGTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GLSSGCGAQLHGVNAAQGLSWRV*PAVFSS
Trigger: GCTGGAGAACACTGCTGGGCACACTCTCCAGCTCAA...CCCCTGGGCGGCGTTCACCCCATGGAGTTGGGCCCCACAGCCACTGGACAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR CCA 90 bp AGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTCATGCCCTCCACAGAGCTGGGGGTTGAGAAGTCCTTaGAGCCCCGGGGTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RAPGPLASGQQSCPPQSWGLRSP*SPGVAR
Trigger: CCTGGCCACCCCGGGGCTCCAAGGACTTCTCAACCC...CCAGCTCTGTGGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp TTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCAGCTGCGCGGAGTCGTaGGGCCGCTGCGCCCACAGC +
Preference number: 4 (lower is better)
Translates to: FLEWVGRSSTRGRNFQAASCAES*GRCAHS
Trigger: GCTGTGGGCGCAGCGGCCCCACGACTCCGCGCAGCT...GGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS-3UTR CCA 90 bp GGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCTGGCTGCGGCGCCGATaGGGAGCTCCGAGTGGTCCG +
Preference number: 4 (lower is better)
Translates to: GSGFLEWVGRSSTRGRNFWLRRR*GAPSGP
Trigger: CGGACCACTCGGAGCTCCCCATCGGCGCCGCAGCCA...GAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAACCCAGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS-3UTR CCA 90 bp GGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAGCCGTCGGGGTCGTaGCTGAGGCCGAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: GSGFLEWVGRSSTRGRNFQPSGS*LRPRLW
Trigger: CCACAGCCTCGGCCTCAGCCACGACCCCGACGGCTG...GAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAACCCAGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS-3UTR CCA 90 bp GGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTCAGCCGTCGGGGTCGTaGCTGAGGCCGAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: GWVEAPLGEETSKLPAGAQPSGS*LRPRLW
Trigger: CCACAGCCTCGGCCTCAGCCACGACCCCGACGGCTG...AGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS-3UTR CCA 90 bp AGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTCATGCCCTCCACAGAGCTGGGCGGTGCGAGCAGGCTaGGCTTTCCACCCTGGCACT +
Preference number: 4 (lower is better)
Translates to: RAPGPLASGQQSCPPQSWAVRAG*AFHPGT
Trigger: AGTGCCAGGGTGGAAAGCCCAGCCTGCTCGCACCGC...CCAGCTCTGTGGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR TCA 90 bp AGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTCCGGCTCCTCCAGGCTaGCGGTGCGCCAGGGTTGTC +
Preference number: 4 (lower is better)
Translates to: SGWVEAPLGEETSKLPAGPAPPG*RCARVV
Trigger: GACAACCCTGGCGCACCGTCAGCCTGGAGGAGCCGG...ACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR TCA 90 bp CCCTCAGGAACTTCTAATGTGGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTCGTTGGCGTCCTGCGTaGCGCGGCTGCGGTCCCGCT +
Preference number: 4 (lower is better)
Translates to: PSGTSNVALGSWSGWVEARWRPA*RGCGPA
Trigger: AGCGGGACCGCAGCCGCGTCACGCAGGACGCCAACG...AGCTTCGACCCACCCACTCCAGGAACCCAGAGCCACATTAGAAGTTCCTGAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS-3UTR TCA 90 bp TGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGCGGCTGCAGGCGCTaGACACGCGCGGAAACGGGT +
Preference number: 4 (lower is better)
Translates to: WVEAPLGEETSKLPAGAGGGCRR*TRAETG
Trigger: ACCCGTTTCCGCGCGTGTTCAGCGCCTGCAGCCGCC...TCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS-3UTR GCA 90 bp AACCATAGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTCATGCCCTCCACAGTGCGCGCTTCTCGCCTaGCCCTGCTCTGGGGACCAC +
Preference number: 4 (lower is better)
Translates to: NHRAPGPLASGQQSCPPQCALLA*PCSGDH
Trigger: GTGGTCCCCAGAGCAGGGGCAGGCGAGAAGCGCGCA...CTGTGGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCTATGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp GAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCGCGCTTCTCGCCTaGCCCTGCTCTGGGGACCAC +
Preference number: 4 (lower is better)
Translates to: EWVGRSSTRGRNFQAACRCALLA*PCSGDH
Trigger: GTGGTCCCCAGAGCAGGGGCAGGCGAGAAGCGCGCA...CCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp GTGTGGACTCAGTCGAACCATAGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGGGTACTTCCGGGTCCTaGGCGCTTCTCGCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: VWTQSNHRAPGPLASGQQGTSGS*ALLACP
Trigger: GGGGCAGGCGAGAAGCGCGCAGGACCCGGAAGTACC...CTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCTATGGTTCGACTGAGTCCACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp GAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGCCAGGCCCCCAGAGCTaGTGGCACTGCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: EWVGRSSTRGRNFQAACRPGPQS*WHCCSS
Trigger: GCTGGAGCAGCAGTGCCAGCAGCTCTGGGGGCCTGG...CCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp GGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTCCAGGCCCCCAGAGCTaGTGGCACTGCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GWVEAPLGEETSKLPAGAPGPQS*WHCCSS
Trigger: GCTGGAGCAGCAGTGCCAGCAGCTCTGGGGGCCTGG...AGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp AGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTAAGCACCCCGGCGCCTaGCACTGGCCAGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SSTRGRNFQAACRCWRSGKHPGA*HWPEQQ
Trigger: CTGCTGCTCTGGCCAGTGCCAGGCGCCGGGGTGCTT...ACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp GGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCAAGCACCCCGGCGCCTaGCACTGGCCAGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GSGFLEWVGRSSTRGRNFKHPGA*HWPEQQ
Trigger: CTGCTGCTCTGGCCAGTGCCAGGCGCCGGGGTGCTT...GAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAACCCAGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp AGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTCATGCCCTCCACAGAGCTGGCACCAGCCCCATGTCTaGCTTCGAGACCGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: RAPGPLASGQQSCPPQSWHQPHV*LRDRLL
Trigger: GAGGAGCCGGTCTCGAAGCCAGACATGGGGCTGGTG...CCAGCTCTGTGGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp TCACTGGCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCGGGGGCCAGCACCACTaGCTGCCCATCTGGGCCGTA +
Preference number: 4 (lower is better)
Translates to: SLALPLQFKFLEWLSVATGGQHH*LPIWAV
Trigger: TACGGCCCAGATGGGCAGCCAGTGGTGCTGGCCCCC...GGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGCCAGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp AGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTGGGGGCCAGCACCACTaGCTGCCCATCTGGGCCGTA +
Preference number: 4 (lower is better)
Translates to: SSTRGRNFQAACRCWRSGGGQHH*LPIWAV
Trigger: TACGGCCCAGATGGGCAGCCAGTGGTGCTGGCCCCC...ACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp GCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTGGCTGCGGCGCCGATaGGGAGCTCCGAGTGGTCCG +
Preference number: 4 (lower is better)
Translates to: ALPLQFKFLEWLSVATCLWLRRR*GAPSGP
Trigger: CGGACCACTCGGAGCTCCCCATCGGCGCCGCAGCCA...AAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS-3UTR CCA 90 bp CCCTCAGGAACTTCTAATGTGGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTCGGGGTCCGGGGCATTaGAGAGGCAAGCGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: PSGTSNVALGSWSGWVEARGPGH*RGKRRP
Trigger: GGGGCGGCGCTTGCCTCTCCAATGCCCCGGACCCCG...AGCTTCGACCCACCCACTCCAGGAACCCAGAGCCACATTAGAAGTTCCTGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp GAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGAGGTCGCGGCACTCCTaGCCAGGGCCGCAGTCACAC +
Preference number: 4 (lower is better)
Translates to: EWVGRSSTRGRNFQAACRRSRHS*PGPQSH
Trigger: GTGTGACTGCGGCCCTGGCCAGGAGTGCCGCGACCT...CCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp GGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTAGGTCGCGGCACTCCTaGCCAGGGCCGCAGTCACAC +
Preference number: 4 (lower is better)
Translates to: GWVEAPLGEETSKLPAGARSRHS*PGPQSH
Trigger: GTGTGACTGCGGCCCTGGCCAGGAGTGCCGCGACCT...AGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp TCACTGGCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCCAGTCACCCATGGCCTaGCGGCACAGCGCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: SLALPLQFKFLEWLSVATQSPMA*RHSAPA
Trigger: GGCTGGAGCGCTGTGCCGCCAGGCCATGGGTGACTG...GGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGCCAGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp TCACTGGCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCGCACAGGGCAGGAAGTaGCCCTCGCTGTCCTGGCCG +
Preference number: 4 (lower is better)
Translates to: SLALPLQFKFLEWLSVATAQGRK*PSLSWP
Trigger: CGGCCAGGACAGCGAGGGCCACTTCCTGCCCTGTGC...GGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGCCAGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp TCACTGGCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCACGCCGCCCAGGGGGTaGTCCCTGTGTGGGCCATCT +
Preference number: 4 (lower is better)
Translates to: SLALPLQFKFLEWLSVATTPPRG*SLCGPS
Trigger: AGATGGCCCACACAGGGACCACCCCCTGGGCGGCGT...GGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGCCAGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp GTGTGGACTCAGTCGAACCATAGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTGGGGCCCAACTCCATaGGGTGAACGCCGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: VWTQSNHRAPGPLASGQQWGPTP*GERRPG
Trigger: CCCTGGGCGGCGTTCACCCCATGGAGTTGGGCCCCA...CTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCTATGGTTCGACTGAGTCCACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp GGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCTGGGGCCCAACTCCATaGGGTGAACGCCGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: GSGFLEWVGRSSTRGRNFWGPTP*GERRPG
Trigger: CCCTGGGCGGCGTTCACCCCATGGAGTTGGGCCCCA...GAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAACCCAGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp GAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGGGGCCCAACTCCATaGGGTGAACGCCGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: EWVGRSSTRGRNFQAACRWGPTP*GERRPG
Trigger: CCCTGGGCGGCGTTCACCCCATGGAGTTGGGCCCCA...CCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp GGGCTGTCCAGTGGCTGTGGGGCCCAACTCCATGGGGTGAACGCCGCCCAGGGGTGCAGTTCAAGTTCCTaGAGTGGCTGTCAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: GLSSGCGAQLHGVNAAQGCSSSS*SGCQWP
Trigger: TGGCCACTGACAGCCACTCCAGGAACTTGAACTGCA...CCCCTGGGCGGCGTTCACCCCATGGAGTTGGGCCCCACAGCCACTGGACAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR TCA 90 bp AACCATAGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTCATGCCCTCCACAGCCAGGGATATGTCCTTaGAGCACCCCGGCGCCTGGC +
Preference number: 4 (lower is better)
Translates to: NHRAPGPLASGQQSCPPQPGICP*STPAPG
Trigger: GCCAGGCGCCGGGGTGCTTCAAGGACATATCCCTGG...CTGTGGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCTATGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR TCA 90 bp CTGGCAGAGGCTTCTCAGGGTGGCTGCTGGGCTCATGAGAGTTCTCAGGGTCCACCAGGGATATGTCCTTaGAGCACCCCGGCGCCTGGC +
Preference number: 4 (lower is better)
Translates to: LAEASQGGCWAHESSQGPPGICP*STPAPG
Trigger: GCCAGGCGCCGGGGTGCTTCAAGGACATATCCCTGG...TGGACCCTGAGAACTCTCATGAGCCCAGCAGCCACCCTGAGAAGCCTCTGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR TCA 90 bp AGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTCATGCCCTCCACAGAGCTGGCGCAGCGAGCAGTTGTaGGCAAAGCAGCAGAGGTCG +
Preference number: 4 (lower is better)
Translates to: RAPGPLASGQQSCPPQSWRSEQL*AKQQRS
Trigger: CGACCTCTGCTGCTTTGCTCACAACTGCTCGCTGCG...CCAGCTCTGTGGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR TCA 90 bp TCACTGGCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCGAGGCAGCAGGACGCTaGGGAGCATGGCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: SLALPLQFKFLEWLSVATEAAGR*GAWPAG
Trigger: TCCTGCTGGCCATGCTCCTCAGCGTCCTGCTGCCTC...GGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGCCAGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR TCA 90 bp GGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTCCTGCTGGCCTCTGGTaGTCCTCCTACCCCGGCTTC +
Preference number: 4 (lower is better)
Translates to: GWVEAPLGEETSKLPAGAPAGLW*SSYPGF
Trigger: GAAGCCGGGGTAGGAGGATCACCAGAGGCCAGCAGG...AGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR TCA 90 bp CTGGCAGAGGCTTCTCAGGGTGGCTGCTGGGCTCATGAGAGTTCTCAGGGTCCATCCGATCGATGCCCCTaGCCCTGCTCTGGGGACCAC +
Preference number: 4 (lower is better)
Translates to: LAEASQGGCWAHESSQGPSDRCP*PCSGDH
Trigger: GTGGTCCCCAGAGCAGGGTCAGGGGCATCGATCGGA...TGGACCCTGAGAACTCTCATGAGCCCAGCAGCCACCCTGAGAAGCCTCTGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR GCA 90 bp AACCATAGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTCATGCCCTCCACAGCCATCCAGGACCCAGTaGGGGGTGACTGGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: NHRAPGPLASGQQSCPPQPSRTQ*GVTGCP
Trigger: TGGGCAGCCAGTCACCCCGCACTGGGTCCTGGATGG...CTGTGGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCTATGGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp AGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGGTACTTCCGGGTCCTaGGCGCTTCTCGCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: SGWVEAPLGEETSKLPAGGTSGS*ALLACP
Trigger: GGGGCAGGCGAGAAGCGCGCAGGACCCGGAAGTACC...ACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp CCCTCAGGAACTTCTAATGTGGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTAGCCCCCGGCGCCACTaGAGGAAGGCCCAGAGCGTG +
Preference number: 4 (lower is better)
Translates to: PSGTSNVALGSWSGWVEASPRRH*RKAQSV
Trigger: CACGCTCTGGGCCTTCCTGCAGTGGCGCCGGGGGCT...AGCTTCGACCCACCCACTCCAGGAACCCAGAGCCACATTAGAAGTTCCTGAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS-3UTR GCA 90 bp AACCATAGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTCATGCCCTCCACAGGCTCCGAGTGGTCCGTaGTCACGCCTCCCGAGCTCT +
Preference number: 4 (lower is better)
Translates to: NHRAPGPLASGQQSCPPQAPSGP*SRLPSS
Trigger: AGAGCTCGGGAGGCGTGAGCACGGACCACTCGGAGC...CTGTGGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCTATGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS-3UTR GCA 90 bp TTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCATGGGCCATGGTGGCTaGGGCGCCGATGGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: FLEWVGRSSTRGRNFQAAMGHGG*GADGEL
Trigger: GAGCTCCCCATCGGCGCCGCAGCCACCATGGCCCAT...GGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS-3UTR GCA 90 bp AACCATAGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTCATGCCCTCCACAGCCCAGCAGTAGCCACTaGCCCTGGCACAGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: NHRAPGPLASGQQSCPPQPSSSH*PWHRVS
Trigger: GCTCACCCTGTGCCAGGGGCAGTGGCTACTGCTGGG...CTGTGGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCTATGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp GGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTTCCACTGGCACCATGTaGGGTGCGAGCAGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: GWVEAPLGEETSKLPAGASTGTM*GASRLG
Trigger: GCCCAGCCTGCTCGCACCGCACATGGTGCCAGTGGA...AGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp AGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTTCCACTGGCACCATGTaGGGTGCGAGCAGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SSTRGRNFQAACRCWRSGSTGTM*GASRLG
Trigger: GCCCAGCCTGCTCGCACCGCACATGGTGCCAGTGGA...ACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp AGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTCATGCCCTCCACAGAGCTGGAGGCTGGTGTGGACCTaGTGGCCTCTGGTGATCCTC +
Preference number: 4 (lower is better)
Translates to: RAPGPLASGQQSCPPQSWRLVWT*WPLVIL
Trigger: GAGGATCACCAGAGGCCAGCAGGTCCACACCAGCCT...CCAGCTCTGTGGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp CACAGAATGGGGGAGAGGCTGTCAGATTCTGAGCTCCAGAACCTCAGGTGTAGCAGCTGCGCGGAGTCGTaGGGCCGCTGCGCCCACAGC +
Preference number: 4 (lower is better)
Translates to: HRMGERLSDSELQNLRCSSCAES*GRCAHS
Trigger: GCTGTGGGCGCAGCGGCCCCACGACTCCGCGCAGCT...GCTACACCTGAGGTTCTGGAGCTCAGAATCTGACAGCCTCTCCCCCATTCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS-3UTR CCA 90 bp CACAGAATGGGGGAGAGGCTGTCAGATTCTGAGCTCCAGAACCTCAGGTGTAGCCCCACTGTGGCGCCCTaGAAGGCGCGGCCCGTGAGC +
Preference number: 4 (lower is better)
Translates to: HRMGERLSDSELQNLRCSPTVAP*KARPVS
Trigger: GCTCACGGGCCGCGCCTTCCAGGGCGCCACAGTGGG...GCTACACCTGAGGTTCTGGAGCTCAGAATCTGACAGCCTCTCCCCCATTCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS-3UTR CCA 90 bp GTGTGGACTCAGTCGAACCATAGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGCGATCTCATGGGCCATaGTGGCTGCGGCGCCGATGG +
Preference number: 4 (lower is better)
Translates to: VWTQSNHRAPGPLASGQQRSHGP*WLRRRW
Trigger: CCATCGGCGCCGCAGCCACCATGGCCCATGAGATCG...CTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCTATGGTTCGACTGAGTCCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS-3UTR CCA 90 bp TCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGAGACACACCAGACTCCCAGCGGGGTCCGGGGCATTaGAGAGGCAAGCGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: STELGPWKLHVGDTPDSQRGPGH*RGKRRP
Trigger: GGGGCGGCGCTTGCCTCTCCAATGCCCCGGACCCCG...CTGGGAGTCTGGTGTGTCTCCTACATGCAATTTCCACGGACCCAGCTCTGTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp GCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTAGGTCGCGGCACTCCTaGCCAGGGCCGCAGTCACAC +
Preference number: 4 (lower is better)
Translates to: ALPLQFKFLEWLSVATCLRSRHS*PGPQSH
Trigger: GTGTGACTGCGGCCCTGGCCAGGAGTGCCGCGACCT...AAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp GCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTCAGTCACCCATGGCCTaGCGGCACAGCGCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: ALPLQFKFLEWLSVATCLQSPMA*RHSAPA
Trigger: GGCTGGAGCGCTGTGCCGCCAGGCCATGGGTGACTG...AAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp AGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTGGTCACAGTCACCCATaGCCTGGCGGCACAGCGCTC +
Preference number: 4 (lower is better)
Translates to: SSTRGRNFQAACRCWRSGGHSHP*PGGTAL
Trigger: GAGCGCTGTGCCGCCAGGCCATGGGTGACTGTGACC...ACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp GAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGGGTCACAGTCACCCATaGCCTGGCGGCACAGCGCTC +
Preference number: 4 (lower is better)
Translates to: EWVGRSSTRGRNFQAACRGHSHP*PGGTAL
Trigger: GAGCGCTGTGCCGCCAGGCCATGGGTGACTGTGACC...CCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp GCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTGCACAGGGCAGGAAGTaGCCCTCGCTGTCCTGGCCG +
Preference number: 4 (lower is better)
Translates to: ALPLQFKFLEWLSVATCLAQGRK*PSLSWP
Trigger: CGGCCAGGACAGCGAGGGCCACTTCCTGCCCTGTGC...AAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp TGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGCACAGGGCAGGAAGTaGCCCTCGCTGTCCTGGCCG +
Preference number: 4 (lower is better)
Translates to: WVEAPLGEETSKLPAGAGAQGRK*PSLSWP
Trigger: CGGCCAGGACAGCGAGGGCCACTTCCTGCCCTGTGC...TCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp AGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTTCCACACTGGGTGCCTaGCTCTACCAGGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: SSTRGRNFQAACRCWRSGSTLGA*LYQAQA
Trigger: GGCCTGGGCCTGGTAGAGCCAGGCACCCAGTGTGGA...ACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp GGGCTGTCCAGTGGCTGTGGGGCCCAACTCCATGGGGTGAACGCCGCCCAGGGGCAGCCTGGAGCACAGTaGCAGTTATGGTTGCTATTG +
Preference number: 4 (lower is better)
Translates to: GLSSGCGAQLHGVNAAQGQPGAQ*QLWLLL
Trigger: CAATAGCAACCATAACTGCCACTGTGCTCCAGGCTG...CCCCTGGGCGGCGTTCACCCCATGGAGTTGGGCCCCACAGCCACTGGACAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR CCA 90 bp TGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAACGCCGCCCAGGGGGTaGTCCCTGTGTGGGCCATCT +
Preference number: 4 (lower is better)
Translates to: WVEAPLGEETSKLPAGAGTPPRG*SLCGPS
Trigger: AGATGGCCCACACAGGGACCACCCCCTGGGCGGCGT...TCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp TGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGATGGGGCCCAACTCCATaGGGTGAACGCCGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: WVEAPLGEETSKLPAGAGWGPTP*GERRPG
Trigger: CCCTGGGCGGCGTTCACCCCATGGAGTTGGGCCCCA...TCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp AACCATAGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTCATGCCCTCCACAGGCCAGGGCTGTCCAGTaGCTGTGGGGCCCAACTCCA +
Preference number: 4 (lower is better)
Translates to: NHRAPGPLASGQQSCPPQARAVQ*LWGPTP
Trigger: TGGAGTTGGGCCCCACAGCCACTGGACAGCCCTGGC...CTGTGGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCTATGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp AGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTGCCAGGGCTGTCCAGTaGCTGTGGGGCCCAACTCCA +
Preference number: 4 (lower is better)
Translates to: SSTRGRNFQAACRCWRSGARAVQ*LWGPTP
Trigger: TGGAGTTGGGCCCCACAGCCACTGGACAGCCCTGGC...ACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp CCTTCTGCAGCCCCAGCTGCATCGCTGCAGATGGGCTCCTGGGAGTCGGTAGCAGTCAGGCGAGACTGCTaGCAGAGGCTTCTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: PSAAPAASLQMGSWESVAVRRDC*QRLLRV
Trigger: CACCCTGAGAAGCCTCTGCCAGCAGTCTCGCCTGAC...TGCTACCGACTCCCAGGAGCCCATCTGCAGCGATGCAGCTGGGGCTGCAGAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR CCA 90 bp AGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTCATGCCCTCCACAGAGCTGGCACTGGGATTGGGGGTaGGGGCTCAGGAACCACCTA +
Preference number: 4 (lower is better)
Translates to: RAPGPLASGQQSCPPQSWHWDWG*GLRNHL
Trigger: TAGGTGGTTCCTGAGCCCCCACCCCCAATCCCAGTG...CCAGCTCTGTGGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR TCA 90 bp AGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTCCAGGGATATGTCCTTaGAGCACCCCGGCGCCTGGC +
Preference number: 4 (lower is better)
Translates to: SGWVEAPLGEETSKLPAGPGICP*STPAPG
Trigger: GCCAGGCGCCGGGGTGCTTCAAGGACATATCCCTGG...ACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR TCA 90 bp TGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGAGGCAGCAGGACGCTaGGGAGCATGGCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: WVEAPLGEETSKLPAGAGEAAGR*GAWPAG
Trigger: TCCTGCTGGCCATGCTCCTCAGCGTCCTGCTGCCTC...TCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR TCA 90 bp AACCATAGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTCATGCCCTCCACAGGTGCTGGAGGTCCGGTaGTTCACTGGCTCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: NHRAPGPLASGQQSCPPQVLEVR*FTGSAP
Trigger: AGGGGCAGAGCCAGTGAATCACCGGACCTCCAGCAC...CTGTGGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCTATGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR TCA 90 bp TTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCCCTGCTGGCCTCTGGTaGTCCTCCTACCCCGGCTTC +
Preference number: 4 (lower is better)
Translates to: FLEWVGRSSTRGRNFQAAPAGLW*SSYPGF
Trigger: GAAGCCGGGGTAGGAGGATCACCAGAGGCCAGCAGG...GGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR TCA 90 bp AGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTCCTGCTGGCCTCTGGTaGTCCTCCTACCCCGGCTTC +
Preference number: 4 (lower is better)
Translates to: SGWVEAPLGEETSKLPAGPAGLW*SSYPGF
Trigger: GAAGCCGGGGTAGGAGGATCACCAGAGGCCAGCAGG...ACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR TCA 90 bp AGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGGCTTGAGCCCTaGCCACCAATCCCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: SGWVEAPLGEETSKLPAGAGLEP*PPIPAP
Trigger: GGGAGCTGGGATTGGTGGTCAGGGCTCAAGCCCAGC...ACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR GCA 90 bp CCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTGATTCCATCCAGGACCCAGTaGGGGGTGACTGGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: PLGEETSKLPAGAGGPVIPSRTQ*GVTGCP
Trigger: TGGGCAGCCAGTCACCCCGCACTGGGTCCTGGATGG...AATCACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp GCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTCCATCCAGGACCCAGTaGGGGGTGACTGGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: ALPLQFKFLEWLSVATCLPSRTQ*GVTGCP
Trigger: TGGGCAGCCAGTCACCCCGCACTGGGTCCTGGATGG...AAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp GAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGCTTCTCGCCTGCCCCTaGTCTGGGGACCACCAGGAA +
Preference number: 4 (lower is better)
Translates to: EWVGRSSTRGRNFQAACRLLACP*SGDHQE
Trigger: TTCCTGGTGGTCCCCAGAGCAGGGGCAGGCGAGAAG...CCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp CACACAGAATGGGGGAGAGGCTGTCAGATTCTGAGCTCCAGAACCTCAGGTGTATCTCGGCGCGGCACATaGCCTCGACGGGCGCCAGGC +
Preference number: 4 (lower is better)
Translates to: HTEWGRGCQILSSRTSGVSRRGT*PRRAPG
Trigger: GCCTGGCGCCCGTCGAGGGCATGTGCCGCGCCGAGA...TACACCTGAGGTTCTGGAGCTCAGAATCTGACAGCCTCTCCCCCATTCTGTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS-3UTR GCA 90 bp CCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTGATTGCTCCGAGTGGTCCGTaGTCACGCCTCCCGAGCTCT +
Preference number: 4 (lower is better)
Translates to: PLGEETSKLPAGAGGPVIAPSGP*SRLPSS
Trigger: AGAGCTCGGGAGGCGTGAGCACGGACCACTCGGAGC...AATCACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS-3UTR GCA 90 bp CCCTCAGGAACTTCTAATGTGGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTATGGGCCATGGTGGCTaGGGCGCCGATGGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: PSGTSNVALGSWSGWVEAMGHGG*GADGEL
Trigger: GAGCTCCCCATCGGCGCCGCAGCCACCATGGCCCAT...AGCTTCGACCCACCCACTCCAGGAACCCAGAGCCACATTAGAAGTTCCTGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS-3UTR GCA 90 bp TCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGAGACACACCAGACTCCCAGACGCGCGGAAACGGGTaGCCGGTGGCCGCAGCCATG +
Preference number: 4 (lower is better)
Translates to: STELGPWKLHVGDTPDSQTRGNG*PVAAAM
Trigger: CATGGCTGCGGCCACCGGGCACCCGTTTCCGCGCGT...CTGGGAGTCTGGTGTGTCTCCTACATGCAATTTCCACGGACCCAGCTCTGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS-3UTR GCA 90 bp CACAGAATGGGGGAGAGGCTGTCAGATTCTGAGCTCCAGAACCTCAGGTGTAGCACGCGCGGAAACGGGTaGCCGGTGGCCGCAGCCATG +
Preference number: 4 (lower is better)
Translates to: HRMGERLSDSELQNLRCSTRGNG*PVAAAM
Trigger: CATGGCTGCGGCCACCGGGCACCCGTTTCCGCGCGT...GCTACACCTGAGGTTCTGGAGCTCAGAATCTGACAGCCTCTCCCCCATTCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS-3UTR GCA 90 bp TTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCCCCAGCAGTAGCCACTaGCCCTGGCACAGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: FLEWVGRSSTRGRNFQAAPSSSH*PWHRVS
Trigger: GCTCACCCTGTGCCAGGGGCAGTGGCTACTGCTGGG...GGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp AGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTCCCAGCAGTAGCCACTaGCCCTGGCACAGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: SGWVEAPLGEETSKLPAGPSSSH*PWHRVS
Trigger: GCTCACCCTGTGCCAGGGGCAGTGGCTACTGCTGGG...ACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp AGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTCCCCAGCTGCATCGCTaGAGATGGGCTCCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: SSTRGRNFQAACRCWRSGPQLHR*RWAPGS
Trigger: ACTCCCAGGAGCCCATCTGCAGCGATGCAGCTGGGG...ACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp AACCATAGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTCATGCCCTCCACAGACGCAGGGTCCCTTCTaGAGCCCCAGCTGCATCGCT +
Preference number: 4 (lower is better)
Translates to: NHRAPGPLASGQQSCPPQTQGPF*SPSCIA
Trigger: AGCGATGCAGCTGGGGCTGCAGAAGGGACCCTGCGT...CTGTGGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCTATGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp TCACTGGCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCACGCAGGGTCCCTTCTaGAGCCCCAGCTGCATCGCT +
Preference number: 4 (lower is better)
Translates to: SLALPLQFKFLEWLSVATTQGPF*SPSCIA
Trigger: AGCGATGCAGCTGGGGCTGCAGAAGGGACCCTGCGT...GGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGCCAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp GCGAGACTGCTGGCAGAGGCTTCTCAGGGTGGCTGCTGGGCTCATGAGAGTTCTGGGGTCAGGCGAGACTaGTGGCAGAGGCTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: ARLLAEASQGGCWAHESSGVRRD*WQRLLR
Trigger: CCTGAGAAGCCTCTGCCAGCAGTCTCGCCTGACCCC...AGAACTCTCATGAGCCCAGCAGCCACCCTGAGAAGCCTCTGCCAGCAGTCTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR GCA 90 bp AGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTCATGCCCTCCACAGAGCTGGAACTTCCAAGCTGCCTaGAGGTGCTGGAGGTCCGGT +
Preference number: 4 (lower is better)
Translates to: RAPGPLASGQQSCPPQSWNFQAA*RCWRSG
Trigger: ACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTT...CCAGCTCTGTGGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp CACACAGAATGGGGGAGAGGCTGTCAGATTCTGAGCTCCAGAACCTCAGGTGTACCGCCCAGGCTGGATTaGGGCCGACCCGTGCCCGGT +
Preference number: 4 (lower is better)
Translates to: HTEWGRGCQILSSRTSGVPPRLD*GRPVPG
Trigger: ACCGGGCACGGGTCGGCCGCAATCCAGCCTGGGCGG...TACACCTGAGGTTCTGGAGCTCAGAATCTGACAGCCTCTCCCCCATTCTGTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp GAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGCCAGTGCGGGGTGACTaGCTGCCCAGGGATATGTCC +
Preference number: 4 (lower is better)
Translates to: EWVGRSSTRGRNFQAACRPVRGD*LPRDMS
Trigger: GGACATATCCCTGGGCAGCCAGTCACCCCGCACTGG...CCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp GGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCACCAGCCCCATGTCTaGCTTCGAGACCGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: GSGFLEWVGRSSTRGRNFHQPHV*LRDRLL
Trigger: GAGGAGCCGGTCTCGAAGCCAGACATGGGGCTGGTG...GAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAACCCAGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp CCTCTCACCAGAGGCAGGATCTTGGCATCTGGACTTGATCTTGGGGGTCAGGCGGGGTTGAGAAGTCCTTaGAGCCCCGGGGTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PLTRGRILASGLDLGGQAGLRSP*SPGVAR
Trigger: CCTGGCCACCCCGGGGCTCCAAGGACTTCTCAACCC...CGCCTGACCCCCAAGATCAAGTCCAGATGCCAAGATCCTGCCTCTGGTGAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR CCA 90 bp GCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTGGGTTGAGAAGTCCTTaGAGCCCCGGGGTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: ALPLQFKFLEWLSVATCLGLRSP*SPGVAR
Trigger: CCTGGCCACCCCGGGGCTCCAAGGACTTCTCAACCC...AAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp CCTTCTGCAGCCCCAGCTGCATCGCTGCAGATGGGCTCCTGGGAGTCGGTAGCAGACCACCAGGAAGGCTaGTCATGCCCGCTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: PSAAPAASLQMGSWESVADHQEG*SCPLCS
Trigger: GGAACAAAGCGGGCATGACCAGCCTTCCTGGTGGTC...TGCTACCGACTCCCAGGAGCCCATCTGCAGCGATGCAGCTGGGGCTGCAGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR CCA 90 bp TTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTCTCATGGGCCATGGTaGCTGCGGCGCCGATGGGGA +
Preference number: 4 (lower is better)
Translates to: FLEWVGRSSTRGRNFQAASHGPW*LRRRWG
Trigger: TCCCCATCGGCGCCGCAGCCACCATGGCCCATGAGA...GGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS-3UTR CCA 90 bp CCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTGATTCGATCTCATGGGCCATaGTGGCTGCGGCGCCGATGG +
Preference number: 4 (lower is better)
Translates to: PLGEETSKLPAGAGGPVIRSHGP*WLRRRW
Trigger: CCATCGGCGCCGCAGCCACCATGGCCCATGAGATCG...AATCACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS-3UTR CCA 90 bp GGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCTGAGGCCGAGGCTGTaGCCGATCTCATGGGCCATG +
Preference number: 4 (lower is better)
Translates to: GSGFLEWVGRSSTRGRNFLRPRL*PISWAM
Trigger: CATGGCCCATGAGATCGGCCACAGCCTCGGCCTCAG...GAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAACCCAGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS-3UTR CCA 90 bp CACACAGAATGGGGGAGAGGCTGTCAGATTCTGAGCTCCAGAACCTCAGGTGTACGGGGTCCGGGGCATTaGAGAGGCAAGCGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: HTEWGRGCQILSSRTSGVRGPGH*RGKRRP
Trigger: GGGGCGGCGCTTGCCTCTCCAATGCCCCGGACCCCG...TACACCTGAGGTTCTGGAGCTCAGAATCTGACAGCCTCTCCCCCATTCTGTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp TGGCCAGCAGTCATGCCCTCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGAAGGTCGCGGCACTCCTaGCCAGGGCCGCAGTCACAC +
Preference number: 4 (lower is better)
Translates to: WPAVMPSTELGPWKLHVGRSRHS*PGPQSH
Trigger: GTGTGACTGCGGCCCTGGCCAGGAGTGCCGCGACCT...TCCTACATGCAATTTCCACGGACCCAGCTCTGTGGAGGGCATGACTGCTGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp CCCTCAGGAACTTCTAATGTGGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTCAGTCACCCATGGCCTaGCGGCACAGCGCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: PSGTSNVALGSWSGWVEAQSPMA*RHSAPA
Trigger: GGCTGGAGCGCTGTGCCGCCAGGCCATGGGTGACTG...AGCTTCGACCCACCCACTCCAGGAACCCAGAGCCACATTAGAAGTTCCTGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp AGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGGTCACAGTCACCCATaGCCTGGCGGCACAGCGCTC +
Preference number: 4 (lower is better)
Translates to: SGWVEAPLGEETSKLPAGGHSHP*PGGTAL
Trigger: GAGCGCTGTGCCGCCAGGCCATGGGTGACTGTGACC...ACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp TTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCGGTCACAGTCACCCATaGCCTGGCGGCACAGCGCTC +
Preference number: 4 (lower is better)
Translates to: FLEWVGRSSTRGRNFQAAGHSHP*PGGTAL
Trigger: GAGCGCTGTGCCGCCAGGCCATGGGTGACTGTGACC...GGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp GGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCACGTCTGGGGGACAGTaGGAGGAGGTGCCCGTGCAA +
Preference number: 4 (lower is better)
Translates to: GSGFLEWVGRSSTRGRNFTSGGQ*EEVPVQ
Trigger: TTGCACGGGCACCTCCTCCCACTGTCCCCCAGACGT...GAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAACCCAGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp GAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGACGTCTGGGGGACAGTaGGAGGAGGTGCCCGTGCAA +
Preference number: 4 (lower is better)
Translates to: EWVGRSSTRGRNFQAACRTSGGQ*EEVPVQ
Trigger: TTGCACGGGCACCTCCTCCCACTGTCCCCCAGACGT...CCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp GTGTGGACTCAGTCGAACCATAGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGACGTCTGGGGGACAGTaGGAGGAGGTGCCCGTGCAA +
Preference number: 4 (lower is better)
Translates to: VWTQSNHRAPGPLASGQQTSGGQ*EEVPVQ
Trigger: TTGCACGGGCACCTCCTCCCACTGTCCCCCAGACGT...CTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCTATGGTTCGACTGAGTCCACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp AACCATAGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTCATGCCCTCCACAGACTGCTGCTCCAGCGTaGGACATGCGCCATCCCAGC +
Preference number: 4 (lower is better)
Translates to: NHRAPGPLASGQQSCPPQTAAPA*DMRHPS
Trigger: GCTGGGATGGCGCATGTCCCACGCTGGAGCAGCAGT...CTGTGGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCTATGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp CCCTCAGGAACTTCTAATGTGGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTGCACAGGGCAGGAAGTaGCCCTCGCTGTCCTGGCCG +
Preference number: 4 (lower is better)
Translates to: PSGTSNVALGSWSGWVEAAQGRK*PSLSWP
Trigger: CGGCCAGGACAGCGAGGGCCACTTCCTGCCCTGTGC...AGCTTCGACCCACCCACTCCAGGAACCCAGAGCCACATTAGAAGTTCCTGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp CCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTGATTGCGGTGCGAGCAGGCTaGGCTTTCCACCCTGGCACT +
Preference number: 4 (lower is better)
Translates to: PLGEETSKLPAGAGGPVIAVRAG*AFHPGT
Trigger: AGTGCCAGGGTGGAAAGCCCAGCCTGCTCGCACCGC...AATCACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp TGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGCGGTGCGAGCAGGCTaGGCTTTCCACCCTGGCACT +
Preference number: 4 (lower is better)
Translates to: WVEAPLGEETSKLPAGAGAVRAG*AFHPGT
Trigger: AGTGCCAGGGTGGAAAGCCCAGCCTGCTCGCACCGC...TCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp AGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCGGTGCGAGCAGGCTaGGCTTTCCACCCTGGCACT +
Preference number: 4 (lower is better)
Translates to: SGWVEAPLGEETSKLPAGAVRAG*AFHPGT
Trigger: AGTGCCAGGGTGGAAAGCCCAGCCTGCTCGCACCGC...ACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp AGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTTCCACACTGGGTGCCTaGCTCTACCAGGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: SGWVEAPLGEETSKLPAGSTLGA*LYQAQA
Trigger: GGCCTGGGCCTGGTAGAGCCAGGCACCCAGTGTGGA...ACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp TGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGACAAACCCCGTGGCTGTaGCAGGCAGTCAGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: WVEAPLGEETSKLPAGAGQTPWL*QAVRQR
Trigger: GCGCTGCCTGACTGCCTGCCACAGCCACGGGGTTTG...TCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp GATCAGGCCACTAGGGTGCAGAGGGGTAGGAGCGGGTGTGAGGGAGCTCTTTCCGGGTGGAGCCCAGCCTaGAGCACAGTGGCAGTTATG +
Preference number: 4 (lower is better)
Translates to: DQATRVQRGRSGCEGALSGWSPA*STVAVM
Trigger: CATAACTGCCACTGTGCTCCAGGCTGGGCTCCACCC...GGAAAGAGCTCCCTCACACCCGCTCCTACCCCTCTGCACCCTAGTGGCCTGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR CCA 90 bp GGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCGGGGTGGTCCCTGTGTaGGCCATCTTTGGGGCCACT +
Preference number: 4 (lower is better)
Translates to: GSGFLEWVGRSSTRGRNFGVVPV*AIFGAT
Trigger: AGTGGCCCCAAAGATGGCCCACACAGGGACCACCCC...GAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAACCCAGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp GAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGGGGGTGGTCCCTGTGTaGGCCATCTTTGGGGCCACT +
Preference number: 4 (lower is better)
Translates to: EWVGRSSTRGRNFQAACRGVVPV*AIFGAT
Trigger: AGTGGCCCCAAAGATGGCCCACACAGGGACCACCCC...CCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp CCCTCAGGAACTTCTAATGTGGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTACGCCGCCCAGGGGGTaGTCCCTGTGTGGGCCATCT +
Preference number: 4 (lower is better)
Translates to: PSGTSNVALGSWSGWVEATPPRG*SLCGPS
Trigger: AGATGGCCCACACAGGGACCACCCCCTGGGCGGCGT...AGCTTCGACCCACCCACTCCAGGAACCCAGAGCCACATTAGAAGTTCCTGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp AGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTGCTGTCCAGTGGCTGTaGGGCCCAACTCCATGGGGT +
Preference number: 4 (lower is better)
Translates to: SSTRGRNFQAACRCWRSGAVQWL*GPTPWG
Trigger: ACCCCATGGAGTTGGGCCCCACAGCCACTGGACAGC...ACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp AACCATAGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTCATGCCCTCCACAGGCTGTCCAGTGGCTGTaGGGCCCAACTCCATGGGGT +
Preference number: 4 (lower is better)
Translates to: NHRAPGPLASGQQSCPPQAVQWL*GPTPWG
Trigger: ACCCCATGGAGTTGGGCCCCACAGCCACTGGACAGC...CTGTGGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCTATGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp AACCATAGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTCATGCCCTCCACAGGGTTCCTGGAGTGGGTaGGTCGAAGCTCCACTCGGG +
Preference number: 4 (lower is better)
Translates to: NHRAPGPLASGQQSCPPQGSWSG*VEAPLG
Trigger: CCCGAGTGGAGCTTCGACCCACCCACTCCAGGAACC...CTGTGGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCTATGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp CTGCTGAGGGTGATCAGGCCACTAGGGTGCAGAGGGGTAGGAGCGGGTGTGAGGGCATCCCAGAGCCCATaGAAGCATCTCACCGTGTGG +
Preference number: 4 (lower is better)
Translates to: LLRVIRPLGCRGVGAGVRASQSP*KHLTVW
Trigger: CCACACGGTGAGATGCTTCCATGGGCTCTGGGATGC...CCTCACACCCGCTCCTACCCCTCTGCACCCTAGTGGCCTGATCACCCTCAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR TCA 90 bp TGGCCAGCAGTCATGCCCTCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGACCAGGGATATGTCCTTaGAGCACCCCGGCGCCTGGC +
Preference number: 4 (lower is better)
Translates to: WPAVMPSTELGPWKLHVGPGICP*STPAPG
Trigger: GCCAGGCGCCGGGGTGCTTCAAGGACATATCCCTGG...TCCTACATGCAATTTCCACGGACCCAGCTCTGTGGAGGGCATGACTGCTGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR TCA 90 bp AGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTCCGGTCAGCGCCACCTaGATGTCCAGAGTCCTGAGA +
Preference number: 4 (lower is better)
Translates to: SSTRGRNFQAACRCWRSGPVSAT*MSRVLR
Trigger: TCTCAGGACTCTGGACATTCAGGTGGCGCTGACCGG...ACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR TCA 90 bp CACACAGAATGGGGGAGAGGCTGTCAGATTCTGAGCTCCAGAACCTCAGGTGTAGGCGGCTGCAGGCGCTaGACACGCGCGGAAACGGGT +
Preference number: 4 (lower is better)
Translates to: HTEWGRGCQILSSRTSGVGGCRR*TRAETG
Trigger: ACCCGTTTCCGCGCGTGTTCAGCGCCTGCAGCCGCC...TACACCTGAGGTTCTGGAGCTCAGAATCTGACAGCCTCTCCCCCATTCTGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS-3UTR TCA 90 bp GTGTGGACTCAGTCGAACCATAGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGCGCAGCGAGCAGTTGTaGGCAAAGCAGCAGAGGTCG +
Preference number: 4 (lower is better)
Translates to: VWTQSNHRAPGPLASGQQRSEQL*AKQQRS
Trigger: CGACCTCTGCTGCTTTGCTCACAACTGCTCGCTGCG...CTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCTATGGTTCGACTGAGTCCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR TCA 90 bp AGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTCGCAGCGAGCAGTTGTaGGCAAAGCAGCAGAGGTCG +
Preference number: 4 (lower is better)
Translates to: SSTRGRNFQAACRCWRSGRSEQL*AKQQRS
Trigger: CGACCTCTGCTGCTTTGCTCACAACTGCTCGCTGCG...ACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR TCA 90 bp GAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGGCAGTCAGGCAGCGCTaGAGCTCCTGGAAGGCATTC +
Preference number: 4 (lower is better)
Translates to: EWVGRSSTRGRNFQAACRAVRQR*SSWKAF
Trigger: GAATGCCTTCCAGGAGCTTCAGCGCTGCCTGACTGC...CCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR TCA 90 bp TGGCCAGCAGTCATGCCCTCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGAGAGGCAGCAGGACGCTaGGGAGCATGGCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: WPAVMPSTELGPWKLHVGEAAGR*GAWPAG
Trigger: TCCTGCTGGCCATGCTCCTCAGCGTCCTGCTGCCTC...TCCTACATGCAATTTCCACGGACCCAGCTCTGTGGAGGGCATGACTGCTGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR TCA 90 bp AGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTTGGCTGCTGGGCTCATaGGAGTTCTCAGGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: SSTRGRNFQAACRCWRSGWLLGS*EFSGSR
Trigger: CCTGGACCCTGAGAACTCTCATGAGCCCAGCAGCCA...ACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR TCA 90 bp GAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGGCTGCTGGGCTCATaGGAGTTCTCAGGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: EWVGRSSTRGRNFQAACRWLLGS*EFSGSR
Trigger: CCTGGACCCTGAGAACTCTCATGAGCCCAGCAGCCA...CCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR TCA 90 bp TGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGTGCTGGAGGTCCGGTaGTTCACTGGCTCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: WVEAPLGEETSKLPAGAGVLEVR*FTGSAP
Trigger: AGGGGCAGAGCCAGTGAATCACCGGACCTCCAGCAC...TCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR TCA 90 bp GCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTGTGCTGGAGGTCCGGTaGTTCACTGGCTCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: ALPLQFKFLEWLSVATCLVLEVR*FTGSAP
Trigger: AGGGGCAGAGCCAGTGAATCACCGGACCTCCAGCAC...AAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR TCA 90 bp GGTCCCTTCTGCAGCCCCAGCTGCATCGCTGCAGATGGGCTCCTGGGAGTCGGTGGACTGATGGTTTATTaGGCTGGAGAGTGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: GPFCSPSCIAADGLLGVGGLMVY*AGECAQ
Trigger: CTGGGCACACTCTCCAGCTCAATAAACCATCAGTCC...ACCGACTCCCAGGAGCCCATCTGCAGCGATGCAGCTGGGGCTGCAGAAGGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR TCA 90 bp AGGCCACTAGGGTGCAGAGGGGTAGGAGCGGGTGTGAGGGAGCTCTTTCCCCATAGGTCAGGGGCTGTGTaGCCTTTGCTTCTGGGACTG +
Preference number: 4 (lower is better)
Translates to: RPLGCRGVGAGVRELFPHRSGAV*PLLLGL
Trigger: CAGTCCCAGAAGCAAAGGTCACACAGCCCCTGACCT...ATGGGGAAAGAGCTCCCTCACACCCGCTCCTACCCCTCTGCACCCTAGTGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR TCA 90 bp TGGCCAGCAGTCATGCCCTCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGACCTGCTGGCCTCTGGTaGTCCTCCTACCCCGGCTTC +
Preference number: 4 (lower is better)
Translates to: WPAVMPSTELGPWKLHVGPAGLW*SSYPGF
Trigger: GAAGCCGGGGTAGGAGGATCACCAGAGGCCAGCAGG...TCCTACATGCAATTTCCACGGACCCAGCTCTGTGGAGGGCATGACTGCTGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR TCA 90 bp AGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTCCTGCTTCAGCCTCCTaGGCAGCTAGGCCTACAGGT +
Preference number: 4 (lower is better)
Translates to: SSTRGRNFQAACRCWRSGPASAS*AARPTG
Trigger: ACCTGTAGGCCTAGCTGCTCAGGAGGCTGAAGCAGG...ACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR TCA 90 bp GGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTCCTGCTTCAGCCTCCTaGGCAGCTAGGCCTACAGGT +
Preference number: 4 (lower is better)
Translates to: GWVEAPLGEETSKLPAGAPASAS*AARPTG
Trigger: ACCTGTAGGCCTAGCTGCTCAGGAGGCTGAAGCAGG...AGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR TCA 90 bp AGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGGAAGCTGCTGGGCTTaGGCCCTGACCACCAATCCC +
Preference number: 4 (lower is better)
Translates to: SGWVEAPLGEETSKLPAGGSCWA*ALTTNP
Trigger: GGGATTGGTGGTCAGGGCTCAAGCCCAGCAGCTTCC...ACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR GCA 90 bp CCCTCAGGAACTTCTAATGTGGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTCCATCCAGGACCCAGTaGGGGGTGACTGGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: PSGTSNVALGSWSGWVEAPSRTQ*GVTGCP
Trigger: TGGGCAGCCAGTCACCCCGCACTGGGTCCTGGATGG...AGCTTCGACCCACCCACTCCAGGAACCCAGAGCCACATTAGAAGTTCCTGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp CCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTGATTCTTCTCGCCTGCCCCTaGTCTGGGGACCACCAGGAA +
Preference number: 4 (lower is better)
Translates to: PLGEETSKLPAGAGGPVILLACP*SGDHQE
Trigger: TTCCTGGTGGTCCCCAGAGCAGGGGCAGGCGAGAAG...AATCACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp TCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGAGACACACCAGACTCCCAGATGGGCCATGGTGGCTaGGGCGCCGATGGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: STELGPWKLHVGDTPDSQMGHGG*GADGEL
Trigger: GAGCTCCCCATCGGCGCCGCAGCCACCATGGCCCAT...CTGGGAGTCTGGTGTGTCTCCTACATGCAATTTCCACGGACCCAGCTCTGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS-3UTR GCA 90 bp GGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCGGGAGGAGGTGCCCGTaGAAAACTCAGGGAGGTCAC +
Preference number: 4 (lower is better)
Translates to: GSGFLEWVGRSSTRGRNFGRRCP*KTQGGH
Trigger: GTGACCTCCCTGAGTTTTGCACGGGCACCTCCTCCC...GAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAACCCAGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp TGGCCAGCAGTCATGCCCTCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGATCCACTGGCACCATGTaGGGTGCGAGCAGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: WPAVMPSTELGPWKLHVGSTGTM*GASRLG
Trigger: GCCCAGCCTGCTCGCACCGCACATGGTGCCAGTGGA...TCCTACATGCAATTTCCACGGACCCAGCTCTGTGGAGGGCATGACTGCTGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp CCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTGATTCCCCAGCTGCATCGCTaGAGATGGGCTCCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: PLGEETSKLPAGAGGPVIPQLHR*RWAPGS
Trigger: ACTCCCAGGAGCCCATCTGCAGCGATGCAGCTGGGG...AATCACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp GAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTTCTGCAGCCCCAGCTaGATCGCTGCAGATGGGCTC +
Preference number: 4 (lower is better)
Translates to: EWVGRSSTRGRNFQAACRFCSPS*IAADGL
Trigger: GAGCCCATCTGCAGCGATGCAGCTGGGGCTGCAGAA...CCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp GGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCTTCTGCAGCCCCAGCTaGATCGCTGCAGATGGGCTC +
Preference number: 4 (lower is better)
Translates to: GSGFLEWVGRSSTRGRNFFCSPS*IAADGL
Trigger: GAGCCCATCTGCAGCGATGCAGCTGGGGCTGCAGAA...GAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAACCCAGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp GCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTACGCAGGGTCCCTTCTaGAGCCCCAGCTGCATCGCT +
Preference number: 4 (lower is better)
Translates to: ALPLQFKFLEWLSVATCLTQGPF*SPSCIA
Trigger: AGCGATGCAGCTGGGGCTGCAGAAGGGACCCTGCGT...AAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp TTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCACGCAGGGTCCCTTCTaGAGCCCCAGCTGCATCGCT +
Preference number: 4 (lower is better)
Translates to: FLEWVGRSSTRGRNFQAATQGPF*SPSCIA
Trigger: AGCGATGCAGCTGGGGCTGCAGAAGGGACCCTGCGT...GGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp TCACTGGCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCCATCTTTGGGGCCACTaGACGCAGGGTCCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: SLALPLQFKFLEWLSVATHLWGH*TQGPFC
Trigger: GCAGAAGGGACCCTGCGTGCAGTGGCCCCAAAGATG...GGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGCCAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp CCTTCTGCAGCCCCAGCTGCATCGCTGCAGATGGGCTCCTGGGAGTCGGTAGCACACTGGCTCTGCCCCTaGAGTTCAAGTTCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: PSAAPAASLQMGSWESVAHWLCP*SSSSWS
Trigger: ACTCCAGGAACTTGAACTGCAGGGGCAGAGCCAGTG...TGCTACCGACTCCCAGGAGCCCATCTGCAGCGATGCAGCTGGGGCTGCAGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR GCA 90 bp AGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTAGGCTGGTGTGGACCTaGTGGCCTCTGGTGATCCTC +
Preference number: 4 (lower is better)
Translates to: SSTRGRNFQAACRCWRSGRLVWT*WPLVIL
Trigger: GAGGATCACCAGAGGCCAGCAGGTCCACACCAGCCT...ACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp CCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTCCGCCCAGGCTGGATTaGGGCCGACCCGTGCCCGGT +
Preference number: 4 (lower is better)
Translates to: PCSSSSWSGCQWPPVFKSPPRLD*GRPVPG
Trigger: ACCGGGCACGGGTCGGCCGCAATCCAGCCTGGGCGG...AGATTTAAAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp GGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTATCAGGCCACTAGGGTaGAGAGGGGTAGGAGCGGGT +
Preference number: 4 (lower is better)
Translates to: GWVEAPLGEETSKLPAGAIRPLG*RGVGAG
Trigger: ACCCGCTCCTACCCCTCTGCACCCTAGTGGCCTGAT...AGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR CCA 90 bp TTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCCCAGTGCGGGGTGACTaGCTGCCCAGGGATATGTCC +
Preference number: 4 (lower is better)
Translates to: FLEWVGRSSTRGRNFQAAPVRGD*LPRDMS
Trigger: GGACATATCCCTGGGCAGCCAGTCACCCCGCACTGG...GGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp CCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTGATTCCAGTGCGGGGTGACTaGCTGCCCAGGGATATGTCC +
Preference number: 4 (lower is better)
Translates to: PLGEETSKLPAGAGGPVIPVRGD*LPRDMS
Trigger: GGACATATCCCTGGGCAGCCAGTCACCCCGCACTGG...AATCACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp GCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTCACCAGCCCCATGTCTaGCTTCGAGACCGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: ALPLQFKFLEWLSVATCLHQPHV*LRDRLL
Trigger: GAGGAGCCGGTCTCGAAGCCAGACATGGGGCTGGTG...AAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp TTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCCACCAGCCCCATGTCTaGCTTCGAGACCGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: FLEWVGRSSTRGRNFQAAHQPHV*LRDRLL
Trigger: GAGGAGCCGGTCTCGAAGCCAGACATGGGGCTGGTG...GGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp CAGAGGCAGCAGGACGCTGAGGAGCATGGCCAGCAGGAAGGTGTCATGGTTTTCCACCAGCCCCATGTCTaGCTTCGAGACCGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: QRQQDAEEHGQQEGVMVFHQPHV*LRDRLL
Trigger: GAGGAGCCGGTCTCGAAGCCAGACATGGGGCTGGTG...GAAAACCATGACACCTTCCTGCTGGCCATGCTCCTCAGCGTCCTGCTGCCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR CCA 90 bp CCTTTCCAGGTGAGCAGCTGCTCCATCCGAAAGATCTCGTGGGTTGAGAAGTCCGGGGGCCAGCACCACTaGCTGCCCATCTGGGCCGTA +
Preference number: 4 (lower is better)
Translates to: PFQVSSCSIRKISWVEKSGGQHH*LPIWAV
Trigger: TACGGCCCAGATGGGCAGCCAGTGGTGCTGGCCCCC...GGACTTCTCAACCCACGAGATCTTTCGGATGGAGCAGCTGCTCACCTGGAAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR CCA 90 bp GGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCTTGGAGCCCCGGGGTaGCCAGGGACGCAGATAATA +
Preference number: 4 (lower is better)
Translates to: GSGFLEWVGRSSTRGRNFLGAPG*PGTQII
Trigger: TATTATCTGCGTCCCTGGCCACCCCGGGGCTCCAAG...GAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAACCCAGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp AGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTCATGCCCTCCACAGAGCTGGTTCCCAGGATCCCTGTaGCCACAGGTTCCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: RAPGPLASGQQSCPPQSWFPGSL*PQVPFQ
Trigger: CTGGAAAGGAACCTGTGGCCACAGGGATCCTGGGAA...CCAGCTCTGTGGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp GTGACCTTTGCTTCTGGGACTGATGGTTTATTGAGCTGGAGAGTGTGCCCAGCACCCACTGTGGCGCCCTaGAAGGCGCGGCCCGTGAGC +
Preference number: 4 (lower is better)
Translates to: VTFASGTDGLLSWRVCPAPTVAP*KARPVS
Trigger: GCTCACGGGCCGCGCCTTCCAGGGCGCCACAGTGGG...TGCTGGGCACACTCTCCAGCTCAATAAACCATCAGTCCCAGAAGCAAAGGTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS-3UTR CCA 90 bp TGGCCAGCAGTCATGCCCTCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGATCTCATGGGCCATGGTaGCTGCGGCGCCGATGGGGA +
Preference number: 4 (lower is better)
Translates to: WPAVMPSTELGPWKLHVGSHGPW*LRRRWG
Trigger: TCCCCATCGGCGCCGCAGCCACCATGGCCCATGAGA...TCCTACATGCAATTTCCACGGACCCAGCTCTGTGGAGGGCATGACTGCTGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS-3UTR CCA 90 bp CACACAGAATGGGGGAGAGGCTGTCAGATTCTGAGCTCCAGAACCTCAGGTGTAAAGAAGGCGCGCAGCTaGCGGCGGCTGCAGGCGCTG +
Preference number: 4 (lower is better)
Translates to: HTEWGRGCQILSSRTSGVKKARS*RRLQAL
Trigger: CAGCGCCTGCAGCCGCCGCCAGCTGCGCGCCTTCTT...TACACCTGAGGTTCTGGAGCTCAGAATCTGACAGCCTCTCCCCCATTCTGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS-3UTR CCA 90 bp CCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTGATTAGTAGCCACTGCCCCTaGCACAGGGTGAGCCGTCCA +
Preference number: 4 (lower is better)
Translates to: PLGEETSKLPAGAGGPVISSHCP*HRVSRP
Trigger: TGGACGGCTCACCCTGTGCCAGGGGCAGTGGCTACT...AATCACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp GCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTAGTAGCCACTGCCCCTaGCACAGGGTGAGCCGTCCA +
Preference number: 4 (lower is better)
Translates to: ALPLQFKFLEWLSVATCLSSHCP*HRVSRP
Trigger: TGGACGGCTCACCCTGTGCCAGGGGCAGTGGCTACT...AAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp CCCTCAGGAACTTCTAATGTGGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTTCCACACTGGGTGCCTaGCTCTACCAGGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: PSGTSNVALGSWSGWVEASTLGA*LYQAQA
Trigger: GGCCTGGGCCTGGTAGAGCCAGGCACCCAGTGTGGA...AGCTTCGACCCACCCACTCCAGGAACCCAGAGCCACATTAGAAGTTCCTGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp CCCTCAGGAACTTCTAATGTGGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTCAAACCCCGTGGCTGTaGCAGGCAGTCAGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: PSGTSNVALGSWSGWVEAQTPWL*QAVRQR
Trigger: GCGCTGCCTGACTGCCTGCCACAGCCACGGGGTTTG...AGCTTCGACCCACCCACTCCAGGAACCCAGAGCCACATTAGAAGTTCCTGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp AGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTGGGTGGAGCCCAGCCTaGAGCACAGTGGCAGTTATG +
Preference number: 4 (lower is better)
Translates to: SSTRGRNFQAACRCWRSGGWSPA*STVAVM
Trigger: CATAACTGCCACTGTGCTCCAGGCTGGGCTCCACCC...ACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp TCACTGGCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCGTCAGGCGAGACTGCTaGCAGAGGCTTCTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: SLALPLQFKFLEWLSVATVRRDC*QRLLRV
Trigger: CACCCTGAGAAGCCTCTGCCAGCAGTCTCGCCTGAC...GGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGCCAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp GTGTGGACTCAGTCGAACCATAGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGGCTGCCTGCAGGTGCTaGAGGTCCGGTGATTCACTG +
Preference number: 4 (lower is better)
Translates to: VWTQSNHRAPGPLASGQQAACRC*RSGDSL
Trigger: CAGTGAATCACCGGACCTCCAGCACCTGCAGGCAGC...CTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCTATGGTTCGACTGAGTCCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp GGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCGTGGCTCTGGGTTCCTaGAGTGGGTGGGTCGAAGCT +
Preference number: 4 (lower is better)
Translates to: GSGFLEWVGRSSTRGRNFVALGS*SGWVEA
Trigger: AGCTTCGACCCACCCACTCCAGGAACCCAGAGCCAC...GAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAACCCAGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp AACCATAGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTCATGCCCTCCACAGGTGGCTCTGGGTTCCTaGAGTGGGTGGGTCGAAGCT +
Preference number: 4 (lower is better)
Translates to: NHRAPGPLASGQQSCPPQVALGS*SGWVEA
Trigger: AGCTTCGACCCACCCACTCCAGGAACCCAGAGCCAC...CTGTGGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCTATGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp GGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTCACTGGGATTGGGGGTaGGGGCTCAGGAACCACCTA +
Preference number: 4 (lower is better)
Translates to: GWVEAPLGEETSKLPAGAHWDWG*GLRNHL
Trigger: TAGGTGGTTCCTGAGCCCCCACCCCCAATCCCAGTG...AGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp GTGACCTTTGCTTCTGGGACTGATGGTTTATTGAGCTGGAGAGTGTGCCCAGCACGGCTCCGCCCAGGCTaGATTGCGGCCGACCCGTGC +
Preference number: 4 (lower is better)
Translates to: VTFASGTDGLLSWRVCPARLRPG*IAADPC
Trigger: GCACGGGTCGGCCGCAATCCAGCCTGGGCGGAGCCG...TGCTGGGCACACTCTCCAGCTCAATAAACCATCAGTCCCAGAAGCAAAGGTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp TCACTGGCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCATCTCACCGTGTGGTTaGGGGCCAGCACCACTGGCT +
Preference number: 4 (lower is better)
Translates to: SLALPLQFKFLEWLSVATISPCG*GPAPLA
Trigger: AGCCAGTGGTGCTGGCCCCCAACCACACGGTGAGAT...GGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGCCAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617732.1
3UTR CAA 72 bp CTCTGGGGACCACCAGGAAGGCTGGTCATGCCCGCTTaGTTCCCAGGATCCCTGTGGCCACAGGTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: LWGPPGRLVMPA*FPGSLWPQVPF
Trigger: GAAAGGAACCTGTGGCCACAGGGATCCTGGGAACAAAGCGGGCATGACCAGCCTTCCTGGTGGTCCCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR TCA 90 bp CACAGAATGGGGGAGAGGCTGTCAGATTCTGAGCTCCAGAACCTCAGGTGTAGCGGACCCAGTGCGGGGTaGCTGGCTGCCCAGGGATAT +
Preference number: 4 (lower is better)
Translates to: HRMGERLSDSELQNLRCSGPSAG*LAAQGY
Trigger: ATATCCCTGGGCAGCCAGTCACCCCGCACTGGGTCC...GCTACACCTGAGGTTCTGGAGCTCAGAATCTGACAGCCTCTCCCCCATTCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR TCA 90 bp AGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTCATGCCCTCCACAGAGCTGGGAATGTCCAGAGTCCTaGGAAGCTGGTCCACGTAGT +
Preference number: 4 (lower is better)
Translates to: RAPGPLASGQQSCPPQSWECPES*EAGPRS
Trigger: ACTACGTGGACCAGCTTCTCAGGACTCTGGACATTC...CCAGCTCTGTGGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR TCA 90 bp TGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGACCGGTCAGCGCCACCTaGATGTCCAGAGTCCTGAGA +
Preference number: 4 (lower is better)
Translates to: WVEAPLGEETSKLPAGAGPVSAT*MSRVLR
Trigger: TCTCAGGACTCTGGACATTCAGGTGGCGCTGACCGG...TCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR TCA 90 bp AGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTCCGGTCAGCGCCACCTaGATGTCCAGAGTCCTGAGA +
Preference number: 4 (lower is better)
Translates to: SGWVEAPLGEETSKLPAGPVSAT*MSRVLR
Trigger: TCTCAGGACTCTGGACATTCAGGTGGCGCTGACCGG...ACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR TCA 90 bp CCTTTCCAGGTGAGCAGCTGCTCCATCCGAAAGATCTCGTGGGTTGAGAAGTCCGAGGCAGCAGGACGCTaGGGAGCATGGCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: PFQVSSCSIRKISWVEKSEAAGR*GAWPAG
Trigger: TCCTGCTGGCCATGCTCCTCAGCGTCCTGCTGCCTC...GGACTTCTCAACCCACGAGATCTTTCGGATGGAGCAGCTGCTCACCTGGAAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR TCA 90 bp CCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTCCCAACTCCATGGGGTaGACGCCGCCCAGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: PCSSSSWSGCQWPPVFKSPNSMG*TPPRGW
Trigger: CCACCCCCTGGGCGGCGTTCACCCCATGGAGTTGGG...AGATTTAAAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR TCA 90 bp TGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGATGGCTGCTGGGCTCATaGGAGTTCTCAGGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: WVEAPLGEETSKLPAGAGWLLGS*EFSGSR
Trigger: CCTGGACCCTGAGAACTCTCATGAGCCCAGCAGCCA...TCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR TCA 90 bp AGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTTGGCTGCTGGGCTCATaGGAGTTCTCAGGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: SGWVEAPLGEETSKLPAGWLLGS*EFSGSR
Trigger: CCTGGACCCTGAGAACTCTCATGAGCCCAGCAGCCA...ACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR TCA 90 bp CCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTGATTTGGCTGCTGGGCTCATaGGAGTTCTCAGGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: PLGEETSKLPAGAGGPVIWLLGS*EFSGSR
Trigger: CCTGGACCCTGAGAACTCTCATGAGCCCAGCAGCCA...AATCACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR TCA 90 bp CTGTGGCCACAGGTTCCTTTCCAGGTGAGCAGCTGCTCCATCCGAAAGATCTCGGTGCTGGAGGTCCGGTaGTTCACTGGCTCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: LWPQVPFQVSSCSIRKISVLEVR*FTGSAP
Trigger: AGGGGCAGAGCCAGTGAATCACCGGACCTCCAGCAC...CGAGATCTTTCGGATGGAGCAGCTGCTCACCTGGAAAGGAACCTGTGGCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR TCA 90 bp TGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGACCTGCTTCAGCCTCCTaGGCAGCTAGGCCTACAGGT +
Preference number: 4 (lower is better)
Translates to: WVEAPLGEETSKLPAGAGPASAS*AARPTG
Trigger: ACCTGTAGGCCTAGCTGCTCAGGAGGCTGAAGCAGG...TCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp CCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGAGCCCCCGGCGCCACTaGAGGAAGGCCCAGAGCGTG +
Preference number: 4 (lower is better)
Translates to: PAVQVPGVAVSGHLSLNLSPRRH*RKAQSV
Trigger: CACGCTCTGGGCCTTCCTGCAGTGGCGCCGGGGGCT...CAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS-3UTR GCA 90 bp TGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGGAGGAGGTGCCCGTaGAAAACTCAGGGAGGTCAC +
Preference number: 4 (lower is better)
Translates to: WVEAPLGEETSKLPAGAGGRRCP*KTQGGH
Trigger: GTGACCTCCCTGAGTTTTGCACGGGCACCTCCTCCC...TCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp CCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTGATTGGGAGGAGGTGCCCGTaGAAAACTCAGGGAGGTCAC +
Preference number: 4 (lower is better)
Translates to: PLGEETSKLPAGAGGPVIGRRCP*KTQGGH
Trigger: GTGACCTCCCTGAGTTTTGCACGGGCACCTCCTCCC...AATCACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp AGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTGACAGTGGGAGGAGGTaGCCGTGCAAAACTCAGGGA +
Preference number: 4 (lower is better)
Translates to: SSTRGRNFQAACRCWRSGDSGRR*PCKTQG
Trigger: TCCCTGAGTTTTGCACGGGCACCTCCTCCCACTGTC...ACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp AACCATAGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTCATGCCCTCCACAGGACAGTGGGAGGAGGTaGCCGTGCAAAACTCAGGGA +
Preference number: 4 (lower is better)
Translates to: NHRAPGPLASGQQSCPPQDSGRR*PCKTQG
Trigger: TCCCTGAGTTTTGCACGGGCACCTCCTCCCACTGTC...CTGTGGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCTATGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp GGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCTTTCCACCCTGGCACTaGAGCTTCCCACACAGGGCA +
Preference number: 4 (lower is better)
Translates to: GSGFLEWVGRSSTRGRNFFPPWH*SFPHRA
Trigger: TGCCCTGTGTGGGAAGCTGCAGTGCCAGGGTGGAAA...GAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAACCCAGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp CACAGAATGGGGGAGAGGCTGTCAGATTCTGAGCTCCAGAACCTCAGGTGTAGCTCCACTGGCACCATGTaGGGTGCGAGCAGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: HRMGERLSDSELQNLRCSSTGTM*GASRLG
Trigger: GCCCAGCCTGCTCGCACCGCACATGGTGCCAGTGGA...GCTACACCTGAGGTTCTGGAGCTCAGAATCTGACAGCCTCTCCCCCATTCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp GGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAAGGCATTCTTCCTaGAGCGCCTGCTCTGGCACA +
Preference number: 4 (lower is better)
Translates to: GWVEAPLGEETSKLPAGAGRHSS*SACSGT
Trigger: TGTGCCAGAGCAGGCGCTGCAGGAAGAATGCCTTCC...AGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp AGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTGGAAGGCATTCTTCCTaGAGCGCCTGCTCTGGCACA +
Preference number: 4 (lower is better)
Translates to: SSTRGRNFQAACRCWRSGGRHSS*SACSGT
Trigger: TGTGCCAGAGCAGGCGCTGCAGGAAGAATGCCTTCC...ACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp GAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGGGCCACTGTCCATGCTaGCACCAAAGCCTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: EWVGRSSTRGRNFQAACRGHCPC*HQSLAC
Trigger: ACAAGCCAGGCTTTGGTGGCAGCATGGACAGTGGCC...CCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp TCACTGGCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCGGCCACTGTCCATGCTaGCACCAAAGCCTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: SLALPLQFKFLEWLSVATGHCPC*HQSLAC
Trigger: ACAAGCCAGGCTTTGGTGGCAGCATGGACAGTGGCC...GGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGCCAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp AGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTCATGCCCTCCACAGAGCTGGTCATGGTTTTCAGCCTaGACAGGGCCACTGTCCATG +
Preference number: 4 (lower is better)
Translates to: RAPGPLASGQQSCPPQSWSWFSA*TGPLSM
Trigger: CATGGACAGTGGCCCTGTGCAGGCTGAAAACCATGA...CCAGCTCTGTGGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp CCCTCAGGAACTTCTAATGTGGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTCCCCAGCTGCATCGCTaGAGATGGGCTCCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: PSGTSNVALGSWSGWVEAPQLHR*RWAPGS
Trigger: ACTCCCAGGAGCCCATCTGCAGCGATGCAGCTGGGG...AGCTTCGACCCACCCACTCCAGGAACCCAGAGCCACATTAGAAGTTCCTGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp GACGCTGAGGAGCATGGCCAGCAGGAAGGTGTCATGGTTTTCAGCCTGCACAGGTTCTGCAGCCCCAGCTaGATCGCTGCAGATGGGCTC +
Preference number: 4 (lower is better)
Translates to: DAEEHGQQEGVMVFSLHRFCSPS*IAADGL
Trigger: GAGCCCATCTGCAGCGATGCAGCTGGGGCTGCAGAA...CCTGTGCAGGCTGAAAACCATGACACCTTCCTGCTGGCCATGCTCCTCAGCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR GCA 90 bp AGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTCATCTTTGGGGCCACTaGACGCAGGGTCCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: SGWVEAPLGEETSKLPAGHLWGH*TQGPFC
Trigger: GCAGAAGGGACCCTGCGTGCAGTGGCCCCAAAGATG...ACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp CCTGCTCTGGGGACCACCAGGAAGGCTGGTCATGCCCGCTTTGTTCCCAGGATCGCTTCTCAGGGTGGCTaGTGGGCTCATGAGAGTTCT +
Preference number: 4 (lower is better)
Translates to: PALGTTRKAGHARFVPRIASQGG*WAHESS
Trigger: AGAACTCTCATGAGCCCAGCAGCCACCCTGAGAAGC...GATCCTGGGAACAAAGCGGGCATGACCAGCCTTCCTGGTGGTCCCCAGAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR GCA 90 bp TGGCCAGCAGTCATGCCCTCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGAGGGGTCAGGCGAGACTaGTGGCAGAGGCTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: WPAVMPSTELGPWKLHVGGVRRD*WQRLLR
Trigger: CCTGAGAAGCCTCTGCCAGCAGTCTCGCCTGACCCC...TCCTACATGCAATTTCCACGGACCCAGCTCTGTGGAGGGCATGACTGCTGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp CCCTCAGGAACTTCTAATGTGGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTGGGGTCAGGCGAGACTaGTGGCAGAGGCTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: PSGTSNVALGSWSGWVEAGVRRD*WQRLLR
Trigger: CCTGAGAAGCCTCTGCCAGCAGTCTCGCCTGACCCC...AGCTTCGACCCACCCACTCCAGGAACCCAGAGCCACATTAGAAGTTCCTGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp TCACTGGCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCCAAGCTGCCTGCAGGTaGTGGAGGTCCGGTGATTCA +
Preference number: 4 (lower is better)
Translates to: SLALPLQFKFLEWLSVATQAACR*WRSGDS
Trigger: TGAATCACCGGACCTCCAGCACCTGCAGGCAGCTTG...GGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGCCAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp TCACTGGCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCAACTTCCAAGCTGCCTaGAGGTGCTGGAGGTCCGGT +
Preference number: 4 (lower is better)
Translates to: SLALPLQFKFLEWLSVATNFQAA*RCWRSG
Trigger: ACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTT...GGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGCCAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp GGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTAACTTCCAAGCTGCCTaGAGGTGCTGGAGGTCCGGT +
Preference number: 4 (lower is better)
Translates to: GWVEAPLGEETSKLPAGANFQAA*RCWRSG
Trigger: ACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTT...AGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp TTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTCTGGCCAGCAGTCATaGCCTCCACAGAGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: FLEWVGRSSTRGRNFQAASGQQS*PPQSWV
Trigger: GACCCAGCTCTGTGGAGGGCATGACTGCTGGCCAGA...GGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp CCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTGATTAGGCTGGTGTGGACCTaGTGGCCTCTGGTGATCCTC +
Preference number: 4 (lower is better)
Translates to: PLGEETSKLPAGAGGPVIRLVWT*WPLVIL
Trigger: GAGGATCACCAGAGGCCAGCAGGTCCACACCAGCCT...AATCACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp TTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCCTTGGAGCCCCGGGGTaGCCAGGGACGCAGATAATA +
Preference number: 4 (lower is better)
Translates to: FLEWVGRSSTRGRNFQAALGAPG*PGTQII
Trigger: TATTATCTGCGTCCCTGGCCACCCCGGGGCTCCAAG...GGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp GCCAGCAGGAAGGTGTCATGGTTTTCAGCCTGCACAGGGCCACTGTCCATGCTGCTTGGAGCCCCGGGGTaGCCAGGGACGCAGATAATA +
Preference number: 4 (lower is better)
Translates to: ASRKVSWFSACTGPLSMLLGAPG*PGTQII
Trigger: TATTATCTGCGTCCCTGGCCACCCCGGGGCTCCAAG...CAGCATGGACAGTGGCCCTGTGCAGGCTGAAAACCATGACACCTTCCTGCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR CCA 90 bp AGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTCTTGGAGCCCCGGGGTaGCCAGGGACGCAGATAATA +
Preference number: 4 (lower is better)
Translates to: SGWVEAPLGEETSKLPAGLGAPG*PGTQII
Trigger: TATTATCTGCGTCCCTGGCCACCCCGGGGCTCCAAG...ACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp CACAGAATGGGGGAGAGGCTGTCAGATTCTGAGCTCCAGAACCTCAGGTGTAGCGGGTTGAGAAGTCCTTaGAGCCCCGGGGTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: HRMGERLSDSELQNLRCSGLRSP*SPGVAR
Trigger: CCTGGCCACCCCGGGGCTCCAAGGACTTCTCAACCC...GCTACACCTGAGGTTCTGGAGCTCAGAATCTGACAGCCTCTCCCCCATTCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp GTGTGGACTCAGTCGAACCATAGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGGACCACCAGGAAGGCTaGTCATGCCCGCTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: VWTQSNHRAPGPLASGQQDHQEG*SCPLCS
Trigger: GGAACAAAGCGGGCATGACCAGCCTTCCTGGTGGTC...CTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCTATGGTTCGACTGAGTCCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp GTGTGGACTCAGTCGAACCATAGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGGCTGGTCCACGTAGTTaGCGACTTCCAGGAGACGCT +
Preference number: 4 (lower is better)
Translates to: VWTQSNHRAPGPLASGQQAGPRS*RLPGDA
Trigger: AGCGTCTCCTGGAAGTCGCCAACTACGTGGACCAGC...CTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCTATGGTTCGACTGAGTCCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp AGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTGCTGGTCCACGTAGTTaGCGACTTCCAGGAGACGCT +
Preference number: 4 (lower is better)
Translates to: SSTRGRNFQAACRCWRSGAGPRS*RLPGDA
Trigger: AGCGTCTCCTGGAAGTCGCCAACTACGTGGACCAGC...ACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp CCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTGGCTGCGGCGCCGATaGGGAGCTCCGAGTGGTCCG +
Preference number: 4 (lower is better)
Translates to: PAVQVPGVAVSGHLSLNLWLRRR*GAPSGP
Trigger: CGGACCACTCGGAGCTCCCCATCGGCGCCGCAGCCA...CAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS-3UTR CCA 90 bp CCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTCAGCCGTCGGGGTCGTaGCTGAGGCCGAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: PCSSSSWSGCQWPPVFKSQPSGS*LRPRLW
Trigger: CCACAGCCTCGGCCTCAGCCACGACCCCGACGGCTG...AGATTTAAAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS-3UTR CCA 90 bp CCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTAAGAAGGCGCGCAGCTaGCGGCGGCTGCAGGCGCTG +
Preference number: 4 (lower is better)
Translates to: PCSSSSWSGCQWPPVFKSKKARS*RRLQAL
Trigger: CAGCGCCTGCAGCCGCCGCCAGCTGCGCGCCTTCTT...AGATTTAAAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS-3UTR CCA 90 bp GTGTGGACTCAGTCGAACCATAGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGGCAGAGTTCACCACCTaGAAACAGGCCTCGGGAGCT +
Preference number: 4 (lower is better)
Translates to: VWTQSNHRAPGPLASGQQAEFTT*KQASGA
Trigger: AGCTCCCGAGGCCTGTTTCCAGGTGGTGAACTCTGC...CTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCTATGGTTCGACTGAGTCCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp GGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCAACGGTAGAGTCCACTaGCACCATGTGCGGTGCGAG +
Preference number: 4 (lower is better)
Translates to: GSGFLEWVGRSSTRGRNFNGRVH*HHVRCE
Trigger: CTCGCACCGCACATGGTGCCAGTGGACTCTACCGTT...GAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAACCCAGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp GGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTCTGCAGCGCCTGCTCTaGCACACCATTCTAGGTCCA +
Preference number: 4 (lower is better)
Translates to: GWVEAPLGEETSKLPAGALQRLL*HTILGP
Trigger: TGGACCTAGAATGGTGTGCCAGAGCAGGCGCTGCAG...AGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp GAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGCTGCAGCGCCTGCTCTaGCACACCATTCTAGGTCCA +
Preference number: 4 (lower is better)
Translates to: EWVGRSSTRGRNFQAACRLQRLL*HTILGP
Trigger: TGGACCTAGAATGGTGTGCCAGAGCAGGCGCTGCAG...CCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp AACCATAGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTCATGCCCTCCACAGCTATTGCAAACCCCGTaGCTGTGGCAGGCAGTCAGG +
Preference number: 4 (lower is better)
Translates to: NHRAPGPLASGQQSCPPQLLQTP*LWQAVR
Trigger: CCTGACTGCCTGCCACAGCCACGGGGTTTGCAATAG...CTGTGGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCTATGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp TGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGGTGGAGCCCAGCCTaGAGCACAGTGGCAGTTATG +
Preference number: 4 (lower is better)
Translates to: WVEAPLGEETSKLPAGAGGWSPA*STVAVM
Trigger: CATAACTGCCACTGTGCTCCAGGCTGGGCTCCACCC...TCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp CCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTGATTGGGTGGAGCCCAGCCTaGAGCACAGTGGCAGTTATG +
Preference number: 4 (lower is better)
Translates to: PLGEETSKLPAGAGGPVIGWSPA*STVAVM
Trigger: CATAACTGCCACTGTGCTCCAGGCTGGGCTCCACCC...AATCACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp AGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTCTGCAGATGGGCTCCTaGGAGTCGGTAGCAACACCA +
Preference number: 4 (lower is better)
Translates to: SSTRGRNFQAACRCWRSGLQMGS*ESVATP
Trigger: TGGTGTTGCTACCGACTCCCAGGAGCCCATCTGCAG...ACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp GAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGCTGCAGATGGGCTCCTaGGAGTCGGTAGCAACACCA +
Preference number: 4 (lower is better)
Translates to: EWVGRSSTRGRNFQAACRLQMGS*ESVATP
Trigger: TGGTGTTGCTACCGACTCCCAGGAGCCCATCTGCAG...CCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp CCCTCAGGAACTTCTAATGTGGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTGCTGTCCAGTGGCTGTaGGGCCCAACTCCATGGGGT +
Preference number: 4 (lower is better)
Translates to: PSGTSNVALGSWSGWVEAAVQWL*GPTPWG
Trigger: ACCCCATGGAGTTGGGCCCCACAGCCACTGGACAGC...AGCTTCGACCCACCCACTCCAGGAACCCAGAGCCACATTAGAAGTTCCTGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp AGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGTCAGGCGAGACTGCTaGCAGAGGCTTCTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: SGWVEAPLGEETSKLPAGVRRDC*QRLLRV
Trigger: CACCCTGAGAAGCCTCTGCCAGCAGTCTCGCCTGAC...ACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp GCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTGTCAGGCGAGACTGCTaGCAGAGGCTTCTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: ALPLQFKFLEWLSVATCLVRRDC*QRLLRV
Trigger: CACCCTGAGAAGCCTCTGCCAGCAGTCTCGCCTGAC...AAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp GAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGGGTCCGGTGATTCACTaGCTCTGCCCCTGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: EWVGRSSTRGRNFQAACRGPVIH*LCPCSS
Trigger: TGAACTGCAGGGGCAGAGCCAGTGAATCACCGGACC...CCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp TCACTGGCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTCTGGGTTCCTGGAGTaGGTGGGTCGAAGCTCCACT +
Preference number: 4 (lower is better)
Translates to: SLALPLQFKFLEWLSVATSGFLE*VGRSST
Trigger: AGTGGAGCTTCGACCCACCCACTCCAGGAACCCAGA...GGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGCCAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp AGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGTGGCTCTGGGTTCCTaGAGTGGGTGGGTCGAAGCT +
Preference number: 4 (lower is better)
Translates to: SGWVEAPLGEETSKLPAGVALGS*SGWVEA
Trigger: AGCTTCGACCCACCCACTCCAGGAACCCAGAGCCAC...ACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp TCACTGGCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCAGGACCACTAGCTTCTaGCCAGCAGTCATGCCCTCC +
Preference number: 4 (lower is better)
Translates to: SLALPLQFKFLEWLSVATRTTSF*PAVMPS
Trigger: GGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCT...GGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGCCAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp GTGTGGACTCAGTCGAACCATAGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGAGGACCACTAGCTTCTaGCCAGCAGTCATGCCCTCC +
Preference number: 4 (lower is better)
Translates to: VWTQSNHRAPGPLASGQQRTTSF*PAVMPS
Trigger: GGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCT...CTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCTATGGTTCGACTGAGTCCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp TCACTGGCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCAATCTCAGCCAGGGCTaGAGCAAGAGGGGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: SLALPLQFKFLEWLSVATNLSQG*SKRGKR
Trigger: CCTCTTGCCCCTCTTGCTCCAGCCCTGGCTGAGATT...GGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGCCAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR TCA 90 bp AGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTAAAGATCTCGTGGGTTaGGAAGTCCTTGGAGCCCCG +
Preference number: 4 (lower is better)
Translates to: SSTRGRNFQAACRCWRSGKDLVG*EVLGAP
Trigger: CGGGGCTCCAAGGACTTCTCAACCCACGAGATCTTT...ACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR TCA 90 bp GTGTGGACTCAGTCGAACCATAGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGAGGTTCCTTTCCAGGTaGGCAGCTGCTCCATCCGAA +
Preference number: 4 (lower is better)
Translates to: VWTQSNHRAPGPLASGQQRFLSR*AAAPSE
Trigger: TTCGGATGGAGCAGCTGCTCACCTGGAAAGGAACCT...CTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCTATGGTTCGACTGAGTCCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR TCA 90 bp AGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTAGGTTCCTTTCCAGGTaGGCAGCTGCTCCATCCGAA +
Preference number: 4 (lower is better)
Translates to: SSTRGRNFQAACRCWRSGRFLSR*AAAPSE
Trigger: TTCGGATGGAGCAGCTGCTCACCTGGAAAGGAACCT...ACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR TCA 90 bp CCCTCAGGAACTTCTAATGTGGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTCCGGTCAGCGCCACCTaGATGTCCAGAGTCCTGAGA +
Preference number: 4 (lower is better)
Translates to: PSGTSNVALGSWSGWVEAPVSAT*MSRVLR
Trigger: TCTCAGGACTCTGGACATTCAGGTGGCGCTGACCGG...AGCTTCGACCCACCCACTCCAGGAACCCAGAGCCACATTAGAAGTTCCTGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR TCA 90 bp TGGCCAGCAGTCATGCCCTCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGACGCAGCGAGCAGTTGTaGGCAAAGCAGCAGAGGTCG +
Preference number: 4 (lower is better)
Translates to: WPAVMPSTELGPWKLHVGRSEQL*AKQQRS
Trigger: CGACCTCTGCTGCTTTGCTCACAACTGCTCGCTGCG...TCCTACATGCAATTTCCACGGACCCAGCTCTGTGGAGGGCATGACTGCTGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR TCA 90 bp TGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGATGGCCGCAGTTTCCATaGGCATCTCCCGCAGAGTTC +
Preference number: 4 (lower is better)
Translates to: WVEAPLGEETSKLPAGAGWPQFP*ASPAEF
Trigger: GAACTCTGCGGGAGATGCTCATGGAAACTGCGGCCA...TCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR TCA 90 bp AGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTTGGCCGCAGTTTCCATaGGCATCTCCCGCAGAGTTC +
Preference number: 4 (lower is better)
Translates to: SGWVEAPLGEETSKLPAGWPQFP*ASPAEF
Trigger: GAACTCTGCGGGAGATGCTCATGGAAACTGCGGCCA...ACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR TCA 90 bp GAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGGAACTCAGGCTCAAGTaGTCCTCCTGCTTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: EWVGRSSTRGRNFQAACRELRLK*SSCFSL
Trigger: GAGGCTGAAGCAGGAGGATCACTTGAGCCTGAGTTC...CCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR TCA 90 bp GGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCGAACTCAGGCTCAAGTaGTCCTCCTGCTTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: GSGFLEWVGRSSTRGRNFELRLK*SSCFSL
Trigger: GAGGCTGAAGCAGGAGGATCACTTGAGCCTGAGTTC...GAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAACCCAGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR TCA 90 bp CCTTTCCAGGTGAGCAGCTGCTCCATCCGAAAGATCTCGTGGGTTGAGAAGTCCGCAGTCAGGCAGCGCTaGAGCTCGTGGAAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PFQVSSCSIRKISWVEKSAVRQR*SSWKLL
Trigger: CAGCAGCTTCCACGAGCTTCAGCGCTGCCTGACTGC...GGACTTCTCAACCCACGAGATCTTTCGGATGGAGCAGCTGCTCACCTGGAAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR GCA 90 bp AACCATAGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTCATGCCCTCCACAGCAGGAAGGCTGGTCATaGCCGCTTTGTTCCCAGGAT +
Preference number: 4 (lower is better)
Translates to: NHRAPGPLASGQQSCPPQQEGWS*PLCSQD
Trigger: ATCCTGGGAACAAAGCGGGCATGACCAGCCTTCCTG...CTGTGGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCTATGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp TCACTGGCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCCAGGAAGGCTGGTCATaGCCGCTTTGTTCCCAGGAT +
Preference number: 4 (lower is better)
Translates to: SLALPLQFKFLEWLSVATQEGWS*PLCSQD
Trigger: ATCCTGGGAACAAAGCGGGCATGACCAGCCTTCCTG...GGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGCCAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp GTGACCTTTGCTTCTGGGACTGATGGTTTATTGAGCTGGAGAGTGTGCCCAGCAGGTACTTCCGGGTCCTaGGCGCTTCTCGCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: VTFASGTDGLLSWRVCPAGTSGS*ALLACP
Trigger: GGGGCAGGCGAGAAGCGCGCAGGACCCGGAAGTACC...TGCTGGGCACACTCTCCAGCTCAATAAACCATCAGTCCCAGAAGCAAAGGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp TGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGACAGTGGGAGGAGGTaGCCGTGCAAAACTCAGGGA +
Preference number: 4 (lower is better)
Translates to: WVEAPLGEETSKLPAGAGDSGRR*PCKTQG
Trigger: TCCCTGAGTTTTGCACGGGCACCTCCTCCCACTGTC...TCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp TCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGAGACACACCAGACTCCCAGCTCCAGCGTGGGACATaGGCCATCCCAGCAGTAGCC +
Preference number: 4 (lower is better)
Translates to: STELGPWKLHVGDTPDSQLQRGT*AIPAVA
Trigger: GGCTACTGCTGGGATGGCGCATGTCCCACGCTGGAG...CTGGGAGTCTGGTGTGTCTCCTACATGCAATTTCCACGGACCCAGCTCTGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp CCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTGATTGGAAGGCATTCTTCCTaGAGCGCCTGCTCTGGCACA +
Preference number: 4 (lower is better)
Translates to: PLGEETSKLPAGAGGPVIGRHSS*SACSGT
Trigger: TGTGCCAGAGCAGGCGCTGCAGGAAGAATGCCTTCC...AATCACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp CCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTGATTGGCCACTGTCCATGCTaGCACCAAAGCCTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: PLGEETSKLPAGAGGPVIGHCPC*HQSLAC
Trigger: ACAAGCCAGGCTTTGGTGGCAGCATGGACAGTGGCC...AATCACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp TGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGCCACTGTCCATGCTaGCACCAAAGCCTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: WVEAPLGEETSKLPAGAGGHCPC*HQSLAC
Trigger: ACAAGCCAGGCTTTGGTGGCAGCATGGACAGTGGCC...TCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp TGGCCAGCAGTCATGCCCTCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGATTCTGCAGCCCCAGCTaGATCGCTGCAGATGGGCTC +
Preference number: 4 (lower is better)
Translates to: WPAVMPSTELGPWKLHVGFCSPS*IAADGL
Trigger: GAGCCCATCTGCAGCGATGCAGCTGGGGCTGCAGAA...TCCTACATGCAATTTCCACGGACCCAGCTCTGTGGAGGGCATGACTGCTGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp CCCTCAGGAACTTCTAATGTGGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTCATCTTTGGGGCCACTaGACGCAGGGTCCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: PSGTSNVALGSWSGWVEAHLWGH*TQGPFC
Trigger: GCAGAAGGGACCCTGCGTGCAGTGGCCCCAAAGATG...AGCTTCGACCCACCCACTCCAGGAACCCAGAGCCACATTAGAAGTTCCTGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp GGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCACTGGCTCTGCCCCTaGAGTTCAAGTTCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: GSGFLEWVGRSSTRGRNFHWLCP*SSSSWS
Trigger: ACTCCAGGAACTTGAACTGCAGGGGCAGAGCCAGTG...GAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAACCCAGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp CCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTGATTAACTTCCAAGCTGCCTaGAGGTGCTGGAGGTCCGGT +
Preference number: 4 (lower is better)
Translates to: PLGEETSKLPAGAGGPVINFQAA*RCWRSG
Trigger: ACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTT...AATCACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp GTGTGGACTCAGTCGAACCATAGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTTGAGCTGGAGAGTGTaGCCAGCAGTGTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: VWTQSNHRAPGPLASGQQLSWRV*PAVFSS
Trigger: GCTGGAGAACACTGCTGGGCACACTCTCCAGCTCAA...CTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCTATGGTTCGACTGAGTCCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp CCCTCAGGAACTTCTAATGTGGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTTCTGGCCAGCAGTCATaGCCTCCACAGAGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: PSGTSNVALGSWSGWVEASGQQS*PPQSWV
Trigger: GACCCAGCTCTGTGGAGGGCATGACTGCTGGCCAGA...AGCTTCGACCCACCCACTCCAGGAACCCAGAGCCACATTAGAAGTTCCTGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp TGGCCAGCAGTCATGCCCTCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGAAGGCTGGTGTGGACCTaGTGGCCTCTGGTGATCCTC +
Preference number: 4 (lower is better)
Translates to: WPAVMPSTELGPWKLHVGRLVWT*WPLVIL
Trigger: GAGGATCACCAGAGGCCAGCAGGTCCACACCAGCCT...TCCTACATGCAATTTCCACGGACCCAGCTCTGTGGAGGGCATGACTGCTGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp CCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGAAGCACCCCGGCGCCTaGCACTGGCCAGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PAVQVPGVAVSGHLSLNLKHPGA*HWPEQQ
Trigger: CTGCTGCTCTGGCCAGTGCCAGGCGCCGGGGTGCTT...CAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp TCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGAGACACACCAGACTCCCAGCCAGTGCGGGGTGACTaGCTGCCCAGGGATATGTCC +
Preference number: 4 (lower is better)
Translates to: STELGPWKLHVGDTPDSQPVRGD*LPRDMS
Trigger: GGACATATCCCTGGGCAGCCAGTCACCCCGCACTGG...CTGGGAGTCTGGTGTGTCTCCTACATGCAATTTCCACGGACCCAGCTCTGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp CTGGCAGAGGCTTCTCAGGGTGGCTGCTGGGCTCATGAGAGTTCTCAGGGTCCACACTGGCTGCCCATCTaGGCCGTAGTGGGTTTCTAT +
Preference number: 4 (lower is better)
Translates to: LAEASQGGCWAHESSQGPHWLPI*AVVGFY
Trigger: ATAGAAACCCACTACGGCCCAGATGGGCAGCCAGTG...TGGACCCTGAGAACTCTCATGAGCCCAGCAGCCACCCTGAGAAGCCTCTGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR CCA 90 bp AGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTCACTGGCTGCCCATCTaGGCCGTAGTGGGTTTCTAT +
Preference number: 4 (lower is better)
Translates to: SSTRGRNFQAACRCWRSGHWLPI*AVVGFY
Trigger: ATAGAAACCCACTACGGCCCAGATGGGCAGCCAGTG...ACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp CCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGGGGGGCCAGCACCACTaGCTGCCCATCTGGGCCGTA +
Preference number: 4 (lower is better)
Translates to: PAVQVPGVAVSGHLSLNLGGQHH*LPIWAV
Trigger: TACGGCCCAGATGGGCAGCCAGTGGTGCTGGCCCCC...CAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp TTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCAATGATCCGTGTGGTTaGGGGCCAGCACCACTGGCT +
Preference number: 4 (lower is better)
Translates to: FLEWVGRSSTRGRNFQAANDPCG*GPAPLA
Trigger: AGCCAGTGGTGCTGGCCCCCAACCACACGGATCATT...GGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp CACACAGAATGGGGGAGAGGCTGTCAGATTCTGAGCTCCAGAACCTCAGGTGTATCTCATGGGCCATGGTaGCTGCGGCGCCGATGGGGA +
Preference number: 4 (lower is better)
Translates to: HTEWGRGCQILSSRTSGVSHGPW*LRRRWG
Trigger: TCCCCATCGGCGCCGCAGCCACCATGGCCCATGAGA...TACACCTGAGGTTCTGGAGCTCAGAATCTGACAGCCTCTCCCCCATTCTGTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS-3UTR CCA 90 bp CACAGAATGGGGGAGAGGCTGTCAGATTCTGAGCTCCAGAACCTCAGGTGTAGCACTGCTGCTCCAGCGTaGGACATGCGCCATCCCAGC +
Preference number: 4 (lower is better)
Translates to: HRMGERLSDSELQNLRCSTAAPA*DMRHPS
Trigger: GCTGGGATGGCGCATGTCCCACGCTGGAGCAGCAGT...GCTACACCTGAGGTTCTGGAGCTCAGAATCTGACAGCCTCTCCCCCATTCTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp TGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGCAGAGTTCACCACCTaGAAACAGGCCTCGGGAGCT +
Preference number: 4 (lower is better)
Translates to: WVEAPLGEETSKLPAGAGAEFTT*KQASGA
Trigger: AGCTCCCGAGGCCTGTTTCCAGGTGGTGAACTCTGC...TCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp CCCTCAGGAACTTCTAATGTGGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTCTGGGCTTTCCACCCTaGCACTGCAGCTTCCCACAC +
Preference number: 4 (lower is better)
Translates to: PSGTSNVALGSWSGWVEALGFPP*HCSFPH
Trigger: GTGTGGGAAGCTGCAGTGCCAGGGTGGAAAGCCCAG...AGCTTCGACCCACCCACTCCAGGAACCCAGAGCCACATTAGAAGTTCCTGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp TTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCAACGGTAGAGTCCACTaGCACCATGTGCGGTGCGAG +
Preference number: 4 (lower is better)
Translates to: FLEWVGRSSTRGRNFQAANGRVH*HHVRCE
Trigger: CTCGCACCGCACATGGTGCCAGTGGACTCTACCGTT...GGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp GGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTATTCTAGGTCCACACTaGGTGCCTGGCTCTACCAGG +
Preference number: 4 (lower is better)
Translates to: GWVEAPLGEETSKLPAGAILGPH*VPGSTR
Trigger: CCTGGTAGAGCCAGGCACCCAGTGTGGACCTAGAAT...AGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp AGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTATTCTAGGTCCACACTaGGTGCCTGGCTCTACCAGG +
Preference number: 4 (lower is better)
Translates to: SSTRGRNFQAACRCWRSGILGPH*VPGSTR
Trigger: CCTGGTAGAGCCAGGCACCCAGTGTGGACCTAGAAT...ACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp TTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCCTATTGCAAACCCCGTaGCTGTGGCAGGCAGTCAGG +
Preference number: 4 (lower is better)
Translates to: FLEWVGRSSTRGRNFQAALLQTP*LWQAVR
Trigger: CCTGACTGCCTGCCACAGCCACGGGGTTTGCAATAG...GGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp GCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTCTGCAGATGGGCTCCTaGGAGTCGGTAGCAACACCA +
Preference number: 4 (lower is better)
Translates to: ALPLQFKFLEWLSVATCLLQMGS*ESVATP
Trigger: TGGTGTTGCTACCGACTCCCAGGAGCCCATCTGCAG...AAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp GTGACCTTTGCTTCTGGGACTGATGGTTTATTGAGCTGGAGAGTGTGCCCAGCAACGCCGCCCAGGGGGTaGTCCCTGTGTGGGCCATCT +
Preference number: 4 (lower is better)
Translates to: VTFASGTDGLLSWRVCPATPPRG*SLCGPS
Trigger: AGATGGCCCACACAGGGACCACCCCCTGGGCGGCGT...TGCTGGGCACACTCTCCAGCTCAATAAACCATCAGTCCCAGAAGCAAAGGTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp CCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTTGGGGCCCAACTCCATaGGGTGAACGCCGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: PCSSSSWSGCQWPPVFKSWGPTP*GERRPG
Trigger: CCCTGGGCGGCGTTCACCCCATGGAGTTGGGCCCCA...AGATTTAAAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp GAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTCTCAGGGTGGCTGCTaGGCTCATGAGAGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: EWVGRSSTRGRNFQAACRSQGGC*AHESSQ
Trigger: CTGAGAACTCTCATGAGCCCAGCAGCCACCCTGAGA...CCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp AACCATAGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTCATGCCCTCCACAGTCTCAGGGTGGCTGCTaGGCTCATGAGAGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: NHRAPGPLASGQQSCPPQSQGGC*AHESSQ
Trigger: CTGAGAACTCTCATGAGCCCAGCAGCCACCCTGAGA...CTGTGGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCTATGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp TGGCCAGCAGTCATGCCCTCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGAGCTGCCTGCAGGTGCTaGAGGTCCGGTGATTCACTG +
Preference number: 4 (lower is better)
Translates to: WPAVMPSTELGPWKLHVGAACRC*RSGDSL
Trigger: CAGTGAATCACCGGACCTCCAGCACCTGCAGGCAGC...TCCTACATGCAATTTCCACGGACCCAGCTCTGTGGAGGGCATGACTGCTGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp CACAGAATGGGGGAGAGGCTGTCAGATTCTGAGCTCCAGAACCTCAGGTGTAGCGGTTCCTGGAGTGGGTaGGTCGAAGCTCCACTCGGG +
Preference number: 4 (lower is better)
Translates to: HRMGERLSDSELQNLRCSGSWSG*VEAPLG
Trigger: CCCGAGTGGAGCTTCGACCCACCCACTCCAGGAACC...GCTACACCTGAGGTTCTGGAGCTCAGAATCTGACAGCCTCTCCCCCATTCTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp TCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGAGACACACCAGACTCCCAGGGTTCCTGGAGTGGGTaGGTCGAAGCTCCACTCGGG +
Preference number: 4 (lower is better)
Translates to: STELGPWKLHVGDTPDSQGSWSG*VEAPLG
Trigger: CCCGAGTGGAGCTTCGACCCACCCACTCCAGGAACC...CTGGGAGTCTGGTGTGTCTCCTACATGCAATTTCCACGGACCCAGCTCTGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp AGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTTCTGGGTTCCTGGAGTaGGTGGGTCGAAGCTCCACT +
Preference number: 4 (lower is better)
Translates to: SGWVEAPLGEETSKLPAGSGFLE*VGRSST
Trigger: AGTGGAGCTTCGACCCACCCACTCCAGGAACCCAGA...ACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp AGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTCTTCTAATGTGGCTCTaGGTTCCTGGAGTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: SSTRGRNFQAACRCWRSGLLMWL*VPGVGG
Trigger: CCCACCCACTCCAGGAACCCAGAGCCACATTAGAAG...ACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp GGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTCTTCTAATGTGGCTCTaGGTTCCTGGAGTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: GWVEAPLGEETSKLPAGALLMWL*VPGVGG
Trigger: CCCACCCACTCCAGGAACCCAGAGCCACATTAGAAG...AGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp AACCATAGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTCATGCCCTCCACAGCTTCTAATGTGGCTCTaGGTTCCTGGAGTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: NHRAPGPLASGQQSCPPQLLMWL*VPGVGG
Trigger: CCCACCCACTCCAGGAACCCAGAGCCACATTAGAAG...CTGTGGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCTATGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp AGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTCATGCCCTCCACAGAGCTGGACAGAGCTGGGTCCGTaGAAATTGCATGTAGGAGAC +
Preference number: 4 (lower is better)
Translates to: RAPGPLASGQQSCPPQSWTELGP*KLHVGD
Trigger: GTCTCCTACATGCAATTTCCACGGACCCAGCTCTGT...CCAGCTCTGTGGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp AGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGGCTCCAGGGGAGTGTaGACTCAGTCGAACCATAGG +
Preference number: 4 (lower is better)
Translates to: SGWVEAPLGEETSKLPAGGSRGV*TQSNHR
Trigger: CCTATGGTTCGACTGAGTCCACACTCCCCTGGAGCC...ACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp CCCTCAGGAACTTCTAATGTGGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTCACTGGGATTGGGGGTaGGGGCTCAGGAACCACCTA +
Preference number: 4 (lower is better)
Translates to: PSGTSNVALGSWSGWVEAHWDWG*GLRNHL
Trigger: TAGGTGGTTCCTGAGCCCCCACCCCCAATCCCAGTG...AGCTTCGACCCACCCACTCCAGGAACCCAGAGCCACATTAGAAGTTCCTGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR TCA 90 bp TTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCAAAGATCTCGTGGGTTaGGAAGTCCTTGGAGCCCCG +
Preference number: 4 (lower is better)
Translates to: FLEWVGRSSTRGRNFQAAKDLVG*EVLGAP
Trigger: CGGGGCTCCAAGGACTTCTCAACCCACGAGATCTTT...GGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR TCA 90 bp TTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCAGGTTCCTTTCCAGGTaGGCAGCTGCTCCATCCGAA +
Preference number: 4 (lower is better)
Translates to: FLEWVGRSSTRGRNFQAARFLSR*AAAPSE
Trigger: TTCGGATGGAGCAGCTGCTCACCTGGAAAGGAACCT...GGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR TCA 90 bp AACCATAGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTCATGCCCTCCACAGGAATGTCCAGAGTCCTaGGAAGCTGGTCCACGTAGT +
Preference number: 4 (lower is better)
Translates to: NHRAPGPLASGQQSCPPQECPES*EAGPRS
Trigger: ACTACGTGGACCAGCTTCTCAGGACTCTGGACATTC...CTGTGGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCTATGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR TCA 90 bp TGGCCAGCAGTCATGCCCTCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGACTTGGCATCTGGACTTaGTCTGCTTGGGGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: WPAVMPSTELGPWKLHVGLGIWT*SAWGSG
Trigger: GCCTGACCCCCAAGCAGATCAAGTCCAGATGCCAAG...TCCTACATGCAATTTCCACGGACCCAGCTCTGTGGAGGGCATGACTGCTGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350009.6
ENST00000356518.7
CDS-3UTR TCA 90 bp GGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGACTGATGGTTTATTaGGCTGGAGAGTGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: GWVEAPLGEETSKLPAGAGLMVY*AGECAQ
Trigger: CTGGGCACACTCTCCAGCTCAATAAACCATCAGTCC...AGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR TCA 90 bp TGGCCAGCAGTCATGCCCTCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGAAGGTCAGGGGCTGTGTaGCCTTTGCTTCTGGGACTG +
Preference number: 4 (lower is better)
Translates to: WPAVMPSTELGPWKLHVGRSGAV*PLLLGL
Trigger: CAGTCCCAGAAGCAAAGGTCACACAGCCCCTGACCT...TCCTACATGCAATTTCCACGGACCCAGCTCTGTGGAGGGCATGACTGCTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp GGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCTTCCAGGTGAGCAGCTaGTCCATCCGAAAGATCTCG +
Preference number: 4 (lower is better)
Translates to: GSGFLEWVGRSSTRGRNFFQVSS*SIRKIS
Trigger: CGAGATCTTTCGGATGGAGCAGCTGCTCACCTGGAA...GAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAACCCAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp GAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTTCCAGGTGAGCAGCTaGTCCATCCGAAAGATCTCG +
Preference number: 4 (lower is better)
Translates to: EWVGRSSTRGRNFQAACRFQVSS*SIRKIS
Trigger: CGAGATCTTTCGGATGGAGCAGCTGCTCACCTGGAA...CCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp TTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCCAGGAAGGCTGGTCATaGCCGCTTTGTTCCCAGGAT +
Preference number: 4 (lower is better)
Translates to: FLEWVGRSSTRGRNFQAAQEGWS*PLCSQD
Trigger: ATCCTGGGAACAAAGCGGGCATGACCAGCCTTCCTG...GGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp CCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGCTCCGAGTGGTCCGTaGTCACGCCTCCCGAGCTCT +
Preference number: 4 (lower is better)
Translates to: PCSSSSWSGCQWPPVFKSAPSGP*SRLPSS
Trigger: AGAGCTCGGGAGGCGTGAGCACGGACCACTCGGAGC...AGATTTAAAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS-3UTR GCA 90 bp TGGCCAGCAGTCATGCCCTCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGAGACAGTGGGAGGAGGTaGCCGTGCAAAACTCAGGGA +
Preference number: 4 (lower is better)
Translates to: WPAVMPSTELGPWKLHVGDSGRR*PCKTQG
Trigger: TCCCTGAGTTTTGCACGGGCACCTCCTCCCACTGTC...TCCTACATGCAATTTCCACGGACCCAGCTCTGTGGAGGGCATGACTGCTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp CACACAGAATGGGGGAGAGGCTGTCAGATTCTGAGCTCCAGAACCTCAGGTGTACTCCAGCGTGGGACATaGGCCATCCCAGCAGTAGCC +
Preference number: 4 (lower is better)
Translates to: HTEWGRGCQILSSRTSGVLQRGT*AIPAVA
Trigger: GGCTACTGCTGGGATGGCGCATGTCCCACGCTGGAG...TACACCTGAGGTTCTGGAGCTCAGAATCTGACAGCCTCTCCCCCATTCTGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp CCTTTCCAGGTGAGCAGCTGCTCCATCCGAAAGATCTCGTGGGTTGAGAAGTCCCATCTTTGGGGCCACTaGACGCAGGGTCCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: PFQVSSCSIRKISWVEKSHLWGH*TQGPFC
Trigger: GCAGAAGGGACCCTGCGTGCAGTGGCCCCAAAGATG...GGACTTCTCAACCCACGAGATCTTTCGGATGGAGCAGCTGCTCACCTGGAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR GCA 90 bp AGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTTCTCAGGGTGGCTaGTGGGCTCATGAGAGTTCT +
Preference number: 4 (lower is better)
Translates to: SGWVEAPLGEETSKLPAGASQGG*WAHESS
Trigger: AGAACTCTCATGAGCCCAGCAGCCACCCTGAGAAGC...ACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp GAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGGTGATTCACTGGCTCTaGCCCTGCAGTTCAAGTTCC +
Preference number: 4 (lower is better)
Translates to: EWVGRSSTRGRNFQAACRVIHWL*PCSSSS
Trigger: GGAACTTGAACTGCAGGGGCAGAGCCAGTGAATCAC...CCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp GGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGTGATTCACTGGCTCTaGCCCTGCAGTTCAAGTTCC +
Preference number: 4 (lower is better)
Translates to: GWVEAPLGEETSKLPAGAVIHWL*PCSSSS
Trigger: GGAACTTGAACTGCAGGGGCAGAGCCAGTGAATCAC...AGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp TGGCCAGCAGTCATGCCCTCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGACAAGCTGCCTGCAGGTaGTGGAGGTCCGGTGATTCA +
Preference number: 4 (lower is better)
Translates to: WPAVMPSTELGPWKLHVGQAACR*WRSGDS
Trigger: TGAATCACCGGACCTCCAGCACCTGCAGGCAGCTTG...TCCTACATGCAATTTCCACGGACCCAGCTCTGTGGAGGGCATGACTGCTGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp GGGACGCAGATAATAGCTGGCATTCCTGCTGAGGGTGATCAGGCCACTAGGGTGCAAGCTGCCTGCAGGTaGTGGAGGTCCGGTGATTCA +
Preference number: 4 (lower is better)
Translates to: GTQIIAGIPAEGDQATRVQAACR*WRSGDS
Trigger: TGAATCACCGGACCTCCAGCACCTGCAGGCAGCTTG...CACCCTAGTGGCCTGATCACCCTCAGCAGGAATGCCAGCTATTATCTGCGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR GCA 90 bp TTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTTGAGCTGGAGAGTGTaGCCAGCAGTGTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: FLEWVGRSSTRGRNFQAALSWRV*PAVFSS
Trigger: GCTGGAGAACACTGCTGGGCACACTCTCCAGCTCAA...GGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp AGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTGCCACCATAGCTCACTaGAGTGTTGAACTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: SSTRGRNFQAACRCWRSGATIAH*SVELRL
Trigger: GAGCCTGAGTTCAACACTGCAGTGAGCTATGGTGGC...ACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp TGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACGCAGCTGGCGGCGGCTaGGGTCCCGCTCGGTCCACA +
Preference number: 4 (lower is better)
Translates to: WSGCQWPPVFKSVHFRSYAAGGG*GPARST
Trigger: TGTGGACCGAGCGGGACCGCAGCCGCCGCCAGCTGC...GTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619289.4
CDS-3UTR CCA 90 bp GGCTTGAGCCCTGACCACCAATCCCAGCTCCCAGAAGGAAGTTTAACATGTTTTAAGCACCCCGGCGCCTaGCACTGGCCAGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GLSPDHQSQLPEGSLTCFKHPGA*HWPEQQ
Trigger: CTGCTGCTCTGGCCAGTGCCAGGCGCCGGGGTGCTT...AAAACATGTTAAACTTCCTTCTGGGAGCTGGGATTGGTGGTCAGGGCTCAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR CCA 90 bp AGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTGGTTTCTATGTATCCTaGGGCCAGCAGCCTGTGGTT +
Preference number: 4 (lower is better)
Translates to: SSTRGRNFQAACRCWRSGGFYVS*GQQPVV
Trigger: AACCACAGGCTGCTGGCCCCAGGATACATAGAAACC...ACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp GGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGTTTCTATGTATCCTaGGGCCAGCAGCCTGTGGTT +
Preference number: 4 (lower is better)
Translates to: GWVEAPLGEETSKLPAGAGFYVS*GQQPVV
Trigger: AACCACAGGCTGCTGGCCCCAGGATACATAGAAACC...AGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp CCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTGATTCACTGGCTGCCCATCTaGGCCGTAGTGGGTTTCTAT +
Preference number: 4 (lower is better)
Translates to: PLGEETSKLPAGAGGPVIHWLPI*AVVGFY
Trigger: ATAGAAACCCACTACGGCCCAGATGGGCAGCCAGTG...AATCACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp CCCTCAGGAACTTCTAATGTGGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTAATGATCCGTGTGGTTaGGGGCCAGCACCACTGGCT +
Preference number: 4 (lower is better)
Translates to: PSGTSNVALGSWSGWVEANDPCG*GPAPLA
Trigger: AGCCAGTGGTGCTGGCCCCCAACCACACGGATCATT...AGCTTCGACCCACCCACTCCAGGAACCCAGAGCCACATTAGAAGTTCCTGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp CCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGGGGTTGAGAAGTCCTTaGAGCCCCGGGGTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PAVQVPGVAVSGHLSLNLGLRSP*SPGVAR
Trigger: CCTGGCCACCCCGGGGCTCCAAGGACTTCTCAACCC...CAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp AGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTCATGCCCTCCACAGAGCTGGATCCGAAAGATCTCGTaGGTTGAGAAGTCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: RAPGPLASGQQSCPPQSWIRKIS*VEKSLE
Trigger: CTCCAAGGACTTCTCAACCCACGAGATCTTTCGGAT...CCAGCTCTGTGGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp CCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTGATTTTCCCAGGATCCCTGTaGCCACAGGTTCCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: PLGEETSKLPAGAGGPVIFPGSL*PQVPFQ
Trigger: CTGGAAAGGAACCTGTGGCCACAGGGATCCTGGGAA...AATCACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp GCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTTCCCAGGATCCCTGTaGCCACAGGTTCCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: ALPLQFKFLEWLSVATCLFPGSL*PQVPFQ
Trigger: CTGGAAAGGAACCTGTGGCCACAGGGATCCTGGGAA...AAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp GCCAGCAGGAAGGTGTCATGGTTTTCAGCCTGCACAGGGCCACTGTCCATGCTGTTCCCAGGATCCCTGTaGCCACAGGTTCCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: ASRKVSWFSACTGPLSMLFPGSL*PQVPFQ
Trigger: CTGGAAAGGAACCTGTGGCCACAGGGATCCTGGGAA...CAGCATGGACAGTGGCCCTGTGCAGGCTGAAAACCATGACACCTTCCTGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR CCA 90 bp CCCTCAGGAACTTCTAATGTGGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTGCTGGTCCACGTAGTTaGCGACTTCCAGGAGACGCT +
Preference number: 4 (lower is better)
Translates to: PSGTSNVALGSWSGWVEAAGPRS*RLPGDA
Trigger: AGCGTCTCCTGGAAGTCGCCAACTACGTGGACCAGC...AGCTTCGACCCACCCACTCCAGGAACCCAGAGCCACATTAGAAGTTCCTGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp AGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCTCCCCACTGTGGCGCCCTaGAAGGCGCGGCCCGTGAGC +
Preference number: 4 (lower is better)
Translates to: SGCQWPPVFKSVHFRSYLPTVAP*KARPVS
Trigger: GCTCACGGGCCGCGCCTTCCAGGGCGCCACAGTGGG...GAGGTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS-3UTR CCA 90 bp CCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTCGATCTCATGGGCCATaGTGGCTGCGGCGCCGATGG +
Preference number: 4 (lower is better)
Translates to: PCSSSSWSGCQWPPVFKSRSHGP*WLRRRW
Trigger: CCATCGGCGCCGCAGCCACCATGGCCCATGAGATCG...AGATTTAAAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS-3UTR CCA 90 bp TTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCATTCTAGGTCCACACTaGGTGCCTGGCTCTACCAGG +
Preference number: 4 (lower is better)
Translates to: FLEWVGRSSTRGRNFQAAILGPH*VPGSTR
Trigger: CCTGGTAGAGCCAGGCACCCAGTGTGGACCTAGAAT...GGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp GTGACCTTTGCTTCTGGGACTGATGGTTTATTGAGCTGGAGAGTGTGCCCAGCACAAACCCCGTGGCTGTaGCAGGCAGTCAGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: VTFASGTDGLLSWRVCPAQTPWL*QAVRQR
Trigger: GCGCTGCCTGACTGCCTGCCACAGCCACGGGGTTTG...TGCTGGGCACACTCTCCAGCTCAATAAACCATCAGTCCCAGAAGCAAAGGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp AGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTAGCAGGAAGGTGTCATaGTTTTCAGCCTGCACAGGG +
Preference number: 4 (lower is better)
Translates to: SSTRGRNFQAACRCWRSGSRKVS*FSACTG
Trigger: CCCTGTGCAGGCTGAAAACCATGACACCTTCCTGCT...ACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp TGGCCAGCAGTCATGCCCTCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGACTGCAGATGGGCTCCTaGGAGTCGGTAGCAACACCA +
Preference number: 4 (lower is better)
Translates to: WPAVMPSTELGPWKLHVGLQMGS*ESVATP
Trigger: TGGTGTTGCTACCGACTCCCAGGAGCCCATCTGCAG...TCCTACATGCAATTTCCACGGACCCAGCTCTGTGGAGGGCATGACTGCTGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp CCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGGCCAGGGCTGTCCAGTaGCTGTGGGGCCCAACTCCA +
Preference number: 4 (lower is better)
Translates to: PAVQVPGVAVSGHLSLNLARAVQ*LWGPTP
Trigger: TGGAGTTGGGCCCCACAGCCACTGGACAGCCCTGGC...CAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp CCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGCCAGGGCTGTCCAGTaGCTGTGGGGCCCAACTCCA +
Preference number: 4 (lower is better)
Translates to: PCSSSSWSGCQWPPVFKSARAVQ*LWGPTP
Trigger: TGGAGTTGGGCCCCACAGCCACTGGACAGCCCTGGC...AGATTTAAAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp AGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTTCTCAGGGTGGCTGCTaGGCTCATGAGAGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: SGWVEAPLGEETSKLPAGSQGGC*AHESSQ
Trigger: CTGAGAACTCTCATGAGCCCAGCAGCCACCCTGAGA...ACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp AGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTTTCAAGTTCCTGGAGTaGCTGTCAGTGGCCACCTGT +
Preference number: 4 (lower is better)
Translates to: SSTRGRNFQAACRCWRSGFKFLE*LSVATC
Trigger: ACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAA...ACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp GAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCAGTTCAAGTTCCTaGAGTGGCTGTCAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: EWVGRSSTRGRNFQAACRCSSSS*SGCQWP
Trigger: TGGCCACTGACAGCCACTCCAGGAACTTGAACTGCA...CCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp CTGTGGCCACAGGTTCCTTTCCAGGTGAGCAGCTGCTCCATCCGAAAGATCTCGTCTGGGTTCCTGGAGTaGGTGGGTCGAAGCTCCACT +
Preference number: 4 (lower is better)
Translates to: LWPQVPFQVSSCSIRKISSGFLE*VGRSST
Trigger: AGTGGAGCTTCGACCCACCCACTCCAGGAACCCAGA...CGAGATCTTTCGGATGGAGCAGCTGCTCACCTGGAAAGGAACCTGTGGCCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR CCA 90 bp TGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGACTTCTAATGTGGCTCTaGGTTCCTGGAGTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: WVEAPLGEETSKLPAGAGLLMWL*VPGVGG
Trigger: CCCACCCACTCCAGGAACCCAGAGCCACATTAGAAG...TCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp AGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTCTTCTAATGTGGCTCTaGGTTCCTGGAGTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: SGWVEAPLGEETSKLPAGLLMWL*VPGVGG
Trigger: CCCACCCACTCCAGGAACCCAGAGCCACATTAGAAG...ACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp TGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAAGGACAGAGCCCTTTTaGGATGGCCAGCACTACCCA +
Preference number: 4 (lower is better)
Translates to: WVEAPLGEETSKLPAGAGRTEPF*DGQHYP
Trigger: TGGGTAGTGCTGGCCATCCCAAAAGGGCTCTGTCCT...TCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp CCCTCAGGAACTTCTAATGTGGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTGGCTCCAGGGGAGTGTaGACTCAGTCGAACCATAGG +
Preference number: 4 (lower is better)
Translates to: PSGTSNVALGSWSGWVEAGSRGV*TQSNHR
Trigger: CCTATGGTTCGACTGAGTCCACACTCCCCTGGAGCC...AGCTTCGACCCACCCACTCCAGGAACCCAGAGCCACATTAGAAGTTCCTGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp TCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGAGACACACCAGACTCCCAGCACTGGGATTGGGGGTaGGGGCTCAGGAACCACCTA +
Preference number: 4 (lower is better)
Translates to: STELGPWKLHVGDTPDSQHWDWG*GLRNHL
Trigger: TAGGTGGTTCCTGAGCCCCCACCCCCAATCCCAGTG...CTGGGAGTCTGGTGTGTCTCCTACATGCAATTTCCACGGACCCAGCTCTGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp GTGTGGACTCAGTCGAACCATAGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGCCGACACACACAGAATaGGGGAGAGGCTGTCAGATT +
Preference number: 4 (lower is better)
Translates to: VWTQSNHRAPGPLASGQQPTHTE*GRGCQI
Trigger: AATCTGACAGCCTCTCCCCCATTCTGTGTGTGTCGG...CTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCTATGGTTCGACTGAGTCCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp TCACTGGCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCCCGACACACACAGAATaGGGGAGAGGCTGTCAGATT +
Preference number: 4 (lower is better)
Translates to: SLALPLQFKFLEWLSVATPTHTE*GRGCQI
Trigger: AATCTGACAGCCTCTCCCCCATTCTGTGTGTGTCGG...GGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGCCAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp TGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCGGCTCCGCCCAGGCTaGATTGCGGCCGACCCGTGC +
Preference number: 4 (lower is better)
Translates to: WSGCQWPPVFKSVHFRSYRLRPG*IAADPC
Trigger: GCACGGGTCGGCCGCAATCCAGCCTGGGCGGAGCCG...GTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000379861.8
ENST00000619289.4
CDS-3UTR TCA 90 bp TGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCCGGCTCCTCCAGGCTaGCGGTGCGCCAGGGTTGTC +
Preference number: 4 (lower is better)
Translates to: WSGCQWPPVFKSVHFRSYPAPPG*RCARVV
Trigger: GACAACCCTGGCGCACCGTCAGCCTGGAGGAGCCGG...GTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR TCA 90 bp AGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCTCCCGGCTCCTCCAGGCTaGCGGTGCGCCAGGGTTGTC +
Preference number: 4 (lower is better)
Translates to: SGCQWPPVFKSVHFRSYLPAPPG*RCARVV
Trigger: GACAACCCTGGCGCACCGTCAGCCTGGAGGAGCCGG...GAGGTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR TCA 90 bp TCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGAGACACACCAGACTCCCAGTCCTGGCCATCTAGGTaGACGGTAGAGTCCACTGGC +
Preference number: 4 (lower is better)
Translates to: STELGPWKLHVGDTPDSQSWPSR*TVESTG
Trigger: GCCAGTGGACTCTACCGTTCACCTAGATGGCCAGGA...CTGGGAGTCTGGTGTGTCTCCTACATGCAATTTCCACGGACCCAGCTCTGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR TCA 90 bp TGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCCCAACTCCATGGGGTaGACGCCGCCCAGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: WSGCQWPPVFKSVHFRSYPNSMG*TPPRGW
Trigger: CCACCCCCTGGGCGGCGTTCACCCCATGGAGTTGGG...GTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR TCA 90 bp CCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGGTGCTGGAGGTCCGGTaGTTCACTGGCTCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: PAVQVPGVAVSGHLSLNLVLEVR*FTGSAP
Trigger: AGGGGCAGAGCCAGTGAATCACCGGACCTCCAGCAC...CAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR TCA 90 bp AGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGGACTGATGGTTTATTaGGCTGGAGAGTGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: SGWVEAPLGEETSKLPAGGLMVY*AGECAQ
Trigger: CTGGGCACACTCTCCAGCTCAATAAACCATCAGTCC...ACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR TCA 90 bp TCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGAGACACACCAGACTCCCAGAGGTCAGGGGCTGTGTaGCCTTTGCTTCTGGGACTG +
Preference number: 4 (lower is better)
Translates to: STELGPWKLHVGDTPDSQRSGAV*PLLLGL
Trigger: CAGTCCCAGAAGCAAAGGTCACACAGCCCCTGACCT...CTGGGAGTCTGGTGTGTCTCCTACATGCAATTTCCACGGACCCAGCTCTGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR TCA 90 bp CACAGAATGGGGGAGAGGCTGTCAGATTCTGAGCTCCAGAACCTCAGGTGTAGCAGGTCAGGGGCTGTGTaGCCTTTGCTTCTGGGACTG +
Preference number: 4 (lower is better)
Translates to: HRMGERLSDSELQNLRCSRSGAV*PLLLGL
Trigger: CAGTCCCAGAAGCAAAGGTCACACAGCCCCTGACCT...GCTACACCTGAGGTTCTGGAGCTCAGAATCTGACAGCCTCTCCCCCATTCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR TCA 90 bp GGGACGCAGATAATAGCTGGCATTCCTGCTGAGGGTGATCAGGCCACTAGGGTGGGGACTCGAGGCCTGTaGATTCCCGTCTCTTCTGAT +
Preference number: 4 (lower is better)
Translates to: GTQIIAGIPAEGDQATRVGTRGL*IPVSSD
Trigger: ATCAGAAGAGACGGGAATTCACAGGCCTCGAGTCCC...CACCCTAGTGGCCTGATCACCCTCAGCAGGAATGCCAGCTATTATCTGCGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR GCA 90 bp TGGCCAGCAGTCATGCCCTCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGATCATCCCAGAGCAGGTaGAGAGGACTACCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: WPAVMPSTELGPWKLHVGSSQSR*RGLPRS
Trigger: ACTCCTGGGTAGTCCTCTGCACCTGCTCTGGGATGA...TCCTACATGCAATTTCCACGGACCCAGCTCTGTGGAGGGCATGACTGCTGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp AGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTTTCCAGGTGAGCAGCTaGTCCATCCGAAAGATCTCG +
Preference number: 4 (lower is better)
Translates to: SGWVEAPLGEETSKLPAGFQVSS*SIRKIS
Trigger: CGAGATCTTTCGGATGGAGCAGCTGCTCACCTGGAA...ACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp CCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTGATTTTCCAGGTGAGCAGCTaGTCCATCCGAAAGATCTCG +
Preference number: 4 (lower is better)
Translates to: PLGEETSKLPAGAGGPVIFQVSS*SIRKIS
Trigger: CGAGATCTTTCGGATGGAGCAGCTGCTCACCTGGAA...AATCACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp CTACCCAGGAGTCGGGGAAGCCCCTTACTCGCCCTTGGTAGTGGCAATGATCCTTTCCAGGTGAGCAGCTaGTCCATCCGAAAGATCTCG +
Preference number: 4 (lower is better)
Translates to: LPRSRGSPLLALGSGNDPFQVSS*SIRKIS
Trigger: CGAGATCTTTCGGATGGAGCAGCTGCTCACCTGGAA...AGGATCATTGCCACTACCAAGGGCGAGTAAGGGGCTTCCCCGACTCCTGGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR GCA 90 bp GGGACGCAGATAATAGCTGGCATTCCTGCTGAGGGTGATCAGGCCACTAGGGTGCAGGAAGGCTGGTCATaGCCGCTTTGTTCCCAGGAT +
Preference number: 4 (lower is better)
Translates to: GTQIIAGIPAEGDQATRVQEGWS*PLCSQD
Trigger: ATCCTGGGAACAAAGCGGGCATGACCAGCCTTCCTG...CACCCTAGTGGCCTGATCACCCTCAGCAGGAATGCCAGCTATTATCTGCGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR GCA 90 bp CCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGCTTCTCGCCTGCCCCTaGTCTGGGGACCACCAGGAA +
Preference number: 4 (lower is better)
Translates to: PAVQVPGVAVSGHLSLNLLLACP*SGDHQE
Trigger: TTCCTGGTGGTCCCCAGAGCAGGGGCAGGCGAGAAG...CAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp GGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGAACAGGGTGTGGTCTaGCACAATGTACAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: GWVEAPLGEETSKLPAGAEQGVV*HNVQFQ
Trigger: CTGGAACTGTACATTGTGGCAGACCACACCCTGTTC...AGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp AGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTTGGTTCAAGTTTCGGTaGCGAGTCAAGAACAGGGTG +
Preference number: 4 (lower is better)
Translates to: SSTRGRNFQAACRCWRSGWFKFR*RVKNRV
Trigger: CACCCTGTTCTTGACTCGGCACCGAAACTTGAACCA...ACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp GGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCTGGTTCAAGTTTCGGTaGCGAGTCAAGAACAGGGTG +
Preference number: 4 (lower is better)
Translates to: GSGFLEWVGRSSTRGRNFWFKFR*RVKNRV
Trigger: CACCCTGTTCTTGACTCGGCACCGAAACTTGAACCA...GAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAACCCAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp GGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTTGGTTCAAGTTTCGGTaGCGAGTCAAGAACAGGGTG +
Preference number: 4 (lower is better)
Translates to: GWVEAPLGEETSKLPAGAWFKFR*RVKNRV
Trigger: CACCCTGTTCTTGACTCGGCACCGAAACTTGAACCA...AGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp AGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCTCACGCGCGGAAACGGGTaGCCGGTGGCCGCAGCCATG +
Preference number: 4 (lower is better)
Translates to: SGCQWPPVFKSVHFRSYLTRGNG*PVAAAM
Trigger: CATGGCTGCGGCCACCGGGCACCCGTTTCCGCGCGT...GAGGTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS-3UTR GCA 90 bp CCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGCTCCAGCGTGGGACATaGGCCATCCCAGCAGTAGCC +
Preference number: 4 (lower is better)
Translates to: PAVQVPGVAVSGHLSLNLLQRGT*AIPAVA
Trigger: GGCTACTGCTGGGATGGCGCATGTCCCACGCTGGAG...CAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp CACACAGAATGGGGGAGAGGCTGTCAGATTCTGAGCTCCAGAACCTCAGGTGTACAGAGCTGCTGGCACTaGTGCTCCAGCGTGGGACAT +
Preference number: 4 (lower is better)
Translates to: HTEWGRGCQILSSRTSGVQSCWH*CSSVGH
Trigger: ATGTCCCACGCTGGAGCAGCAGTGCCAGCAGCTCTG...TACACCTGAGGTTCTGGAGCTCAGAATCTGACAGCCTCTCCCCCATTCTGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp CACAGAATGGGGGAGAGGCTGTCAGATTCTGAGCTCCAGAACCTCAGGTGTAGCTTTCCACCCTGGCACTaGAGCTTCCCACACAGGGCA +
Preference number: 4 (lower is better)
Translates to: HRMGERLSDSELQNLRCSFPPWH*SFPHRA
Trigger: TGCCCTGTGTGGGAAGCTGCAGTGCCAGGGTGGAAA...GCTACACCTGAGGTTCTGGAGCTCAGAATCTGACAGCCTCTCCCCCATTCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp GGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCAGTGGCAGTTATGGTTaGTATTGCAAACCCCGTGGC +
Preference number: 4 (lower is better)
Translates to: GSGFLEWVGRSSTRGRNFSGSYG*YCKPRG
Trigger: GCCACGGGGTTTGCAATAGCAACCATAACTGCCACT...GAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAACCCAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp GGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTAGTGGCAGTTATGGTTaGTATTGCAAACCCCGTGGC +
Preference number: 4 (lower is better)
Translates to: GWVEAPLGEETSKLPAGASGSYG*YCKPRG
Trigger: GCCACGGGGTTTGCAATAGCAACCATAACTGCCACT...AGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp TTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTCATGGTTTTCAGCCTaGACAGGGCCACTGTCCATG +
Preference number: 4 (lower is better)
Translates to: FLEWVGRSSTRGRNFQAASWFSA*TGPLSM
Trigger: CATGGACAGTGGCCCTGTGCAGGCTGAAAACCATGA...GGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp TGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGATCATGGTTTTCAGCCTaGACAGGGCCACTGTCCATG +
Preference number: 4 (lower is better)
Translates to: WVEAPLGEETSKLPAGAGSWFSA*TGPLSM
Trigger: CATGGACAGTGGCCCTGTGCAGGCTGAAAACCATGA...TCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp CCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGACGCAGGGTCCCTTCTaGAGCCCCAGCTGCATCGCT +
Preference number: 4 (lower is better)
Translates to: PAVQVPGVAVSGHLSLNLTQGPF*SPSCIA
Trigger: AGCGATGCAGCTGGGGCTGCAGAAGGGACCCTGCGT...CAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp CCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGGGGTCAGGCGAGACTaGTGGCAGAGGCTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: PCSSSSWSGCQWPPVFKSGVRRD*WQRLLR
Trigger: CCTGAGAAGCCTCTGCCAGCAGTCTCGCCTGACCCC...AGATTTAAAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp CTACCCAGGAGTCGGGGAAGCCCCTTACTCGCCCTTGGTAGTGGCAATGATCCTGTGATTCACTGGCTCTaGCCCTGCAGTTCAAGTTCC +
Preference number: 4 (lower is better)
Translates to: LPRSRGSPLLALGSGNDPVIHWL*PCSSSS
Trigger: GGAACTTGAACTGCAGGGGCAGAGCCAGTGAATCAC...AGGATCATTGCCACTACCAAGGGCGAGTAAGGGGCTTCCCCGACTCCTGGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR GCA 90 bp CACACAGAATGGGGGAGAGGCTGTCAGATTCTGAGCTCCAGAACCTCAGGTGTATCTGGCCAGCAGTCATaGCCTCCACAGAGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: HTEWGRGCQILSSRTSGVSGQQS*PPQSWV
Trigger: GACCCAGCTCTGTGGAGGGCATGACTGCTGGCCAGA...TACACCTGAGGTTCTGGAGCTCAGAATCTGACAGCCTCTCCCCCATTCTGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp AGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTCATGCCCTCCACAGAGCTGGAAAATTATGTTTGTTTaGAGAGGCCAGCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: RAPGPLASGQQSCPPQSWKIMFV*RGQPGS
Trigger: GGAGCCTGGCTGGCCTCTGCAAACAAACATAATTTT...CCAGCTCTGTGGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp GCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTGCCACCATAGCTCACTaGAGTGTTGAACTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: ALPLQFKFLEWLSVATCLATIAH*SVELRL
Trigger: GAGCCTGAGTTCAACACTGCAGTGAGCTATGGTGGC...AAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp GTGACCTTTGCTTCTGGGACTGATGGTTTATTGAGCTGGAGAGTGTGCCCAGCACCAGTGCGGGGTGACTaGCTGCCCAGGGATATGTCC +
Preference number: 4 (lower is better)
Translates to: VTFASGTDGLLSWRVCPAPVRGD*LPRDMS
Trigger: GGACATATCCCTGGGCAGCCAGTCACCCCGCACTGG...TGCTGGGCACACTCTCCAGCTCAATAAACCATCAGTCCCAGAAGCAAAGGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp CCCTCAGGAACTTCTAATGTGGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTCACTGGCTGCCCATCTaGGCCGTAGTGGGTTTCTAT +
Preference number: 4 (lower is better)
Translates to: PSGTSNVALGSWSGWVEAHWLPI*AVVGFY
Trigger: ATAGAAACCCACTACGGCCCAGATGGGCAGCCAGTG...AGCTTCGACCCACCCACTCCAGGAACCCAGAGCCACATTAGAAGTTCCTGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp CACACAGAATGGGGGAGAGGCTGTCAGATTCTGAGCTCCAGAACCTCAGGTGTACTTGGAGCCCCGGGGTaGCCAGGGACGCAGATAATA +
Preference number: 4 (lower is better)
Translates to: HTEWGRGCQILSSRTSGVLGAPG*PGTQII
Trigger: TATTATCTGCGTCCCTGGCCACCCCGGGGCTCCAAG...TACACCTGAGGTTCTGGAGCTCAGAATCTGACAGCCTCTCCCCCATTCTGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp GGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTAGACGCTGTTTGGTGTaGTTCAAGTTTCGGTGCCGA +
Preference number: 4 (lower is better)
Translates to: GWVEAPLGEETSKLPAGARRCLV*FKFRCR
Trigger: TCGGCACCGAAACTTGAACCACACCAAACAGCGTCT...AGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp AACCATAGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTCATGCCCTCCACAGCCAGGAGACGCTGTTTaGTGTGGTTCAAGTTTCGGT +
Preference number: 4 (lower is better)
Translates to: NHRAPGPLASGQQSCPPQPGDAV*CGSSFG
Trigger: ACCGAAACTTGAACCACACCAAACAGCGTCTCCTGG...CTGTGGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCTATGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp AGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCTCAAGAAGGCGCGCAGCTaGCGGCGGCTGCAGGCGCTG +
Preference number: 4 (lower is better)
Translates to: SGCQWPPVFKSVHFRSYLKKARS*RRLQAL
Trigger: CAGCGCCTGCAGCCGCCGCCAGCTGCGCGCCTTCTT...GAGGTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS-3UTR CCA 90 bp CCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGACGTCTGGGGGACAGTaGGAGGAGGTGCCCGTGCAA +
Preference number: 4 (lower is better)
Translates to: PAVQVPGVAVSGHLSLNLTSGGQ*EEVPVQ
Trigger: TTGCACGGGCACCTCCTCCCACTGTCCCCCAGACGT...CAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp GTGACCTTTGCTTCTGGGACTGATGGTTTATTGAGCTGGAGAGTGTGCCCAGCAAGTAGCCACTGCCCCTaGCACAGGGTGAGCCGTCCA +
Preference number: 4 (lower is better)
Translates to: VTFASGTDGLLSWRVCPASSHCP*HRVSRP
Trigger: TGGACGGCTCACCCTGTGCCAGGGGCAGTGGCTACT...TGCTGGGCACACTCTCCAGCTCAATAAACCATCAGTCCCAGAAGCAAAGGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp CCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGACTGCTGCTCCAGCGTaGGACATGCGCCATCCCAGC +
Preference number: 4 (lower is better)
Translates to: PAVQVPGVAVSGHLSLNLTAAPA*DMRHPS
Trigger: GCTGGGATGGCGCATGTCCCACGCTGGAGCAGCAGT...CAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp CACAGAATGGGGGAGAGGCTGTCAGATTCTGAGCTCCAGAACCTCAGGTGTAGCGCAGAGTTCACCACCTaGAAACAGGCCTCGGGAGCT +
Preference number: 4 (lower is better)
Translates to: HRMGERLSDSELQNLRCSAEFTT*KQASGA
Trigger: AGCTCCCGAGGCCTGTTTCCAGGTGGTGAACTCTGC...GCTACACCTGAGGTTCTGGAGCTCAGAATCTGACAGCCTCTCCCCCATTCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp CACACAGAATGGGGGAGAGGCTGTCAGATTCTGAGCTCCAGAACCTCAGGTGTACTGGGCTTTCCACCCTaGCACTGCAGCTTCCCACAC +
Preference number: 4 (lower is better)
Translates to: HTEWGRGCQILSSRTSGVLGFPP*HCSFPH
Trigger: GTGTGGGAAGCTGCAGTGCCAGGGTGGAAAGCCCAG...TACACCTGAGGTTCTGGAGCTCAGAATCTGACAGCCTCTCCCCCATTCTGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp TCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGAGACACACCAGACTCCCAGCTGCAGCGCCTGCTCTaGCACACCATTCTAGGTCCA +
Preference number: 4 (lower is better)
Translates to: STELGPWKLHVGDTPDSQLQRLL*HTILGP
Trigger: TGGACCTAGAATGGTGTGCCAGAGCAGGCGCTGCAG...CTGGGAGTCTGGTGTGTCTCCTACATGCAATTTCCACGGACCCAGCTCTGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp GGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTCAGCCTGGAGCACAGTaGCAGTTATGGTTGCTATTG +
Preference number: 4 (lower is better)
Translates to: GWVEAPLGEETSKLPAGAQPGAQ*QLWLLL
Trigger: CAATAGCAACCATAACTGCCACTGTGCTCCAGGCTG...AGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp CCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGGGGTGGTCCCTGTGTaGGCCATCTTTGGGGCCACT +
Preference number: 4 (lower is better)
Translates to: PCSSSSWSGCQWPPVFKSGVVPV*AIFGAT
Trigger: AGTGGCCCCAAAGATGGCCCACACAGGGACCACCCC...AGATTTAAAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp CCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGGCTGTCCAGTGGCTGTaGGGCCCAACTCCATGGGGT +
Preference number: 4 (lower is better)
Translates to: PAVQVPGVAVSGHLSLNLAVQWL*GPTPWG
Trigger: ACCCCATGGAGTTGGGCCCCACAGCCACTGGACAGC...CAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp TTCCCGTCTCTTCTGATTTGGAGGGCTATAGATACAGCATTCCCACTCCCATCCGCCAGGGCTGTCCAGTaGCTGTGGGGCCCAACTCCA +
Preference number: 4 (lower is better)
Translates to: FPSLLIWRAIDTAFPLPSARAVQ*LWGPTP
Trigger: TGGAGTTGGGCCCCACAGCCACTGGACAGCCCTGGC...GGATGGGAGTGGGAATGCTGTATCTATAGCCCTCCAAATCAGAAGAGACGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR CCA 90 bp CACACAGAATGGGGGAGAGGCTGTCAGATTCTGAGCTCCAGAACCTCAGGTGTAGTCAGGCGAGACTGCTaGCAGAGGCTTCTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: HTEWGRGCQILSSRTSGVVRRDC*QRLLRV
Trigger: CACCCTGAGAAGCCTCTGCCAGCAGTCTCGCCTGAC...TACACCTGAGGTTCTGGAGCTCAGAATCTGACAGCCTCTCCCCCATTCTGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp GCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTGCAGTTCAAGTTCCTaGAGTGGCTGTCAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: ALPLQFKFLEWLSVATCLCSSSS*SGCQWP
Trigger: TGGCCACTGACAGCCACTCCAGGAACTTGAACTGCA...AAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp AGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTCAGGAACTTCTAATGTaGCTCTGGGTTCCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: SSTRGRNFQAACRCWRSGQELLM*LWVPGV
Trigger: CACTCCAGGAACCCAGAGCCACATTAGAAGTTCCTG...ACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp GGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCGATGGTTTATTGAGCTaGAGAGTGTGCCCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: GSGFLEWVGRSSTRGRNFDGLLS*RVCPAV
Trigger: CACTGCTGGGCACACTCTCCAGCTCAATAAACCATC...GAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAACCCAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp AGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTGATGGTTTATTGAGCTaGAGAGTGTGCCCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: SSTRGRNFQAACRCWRSGDGLLS*RVCPAV
Trigger: CACTGCTGGGCACACTCTCCAGCTCAATAAACCATC...ACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp GGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTACAGAGCTGGGTCCGTaGAAATTGCATGTAGGAGAC +
Preference number: 4 (lower is better)
Translates to: GWVEAPLGEETSKLPAGATELGP*KLHVGD
Trigger: GTCTCCTACATGCAATTTCCACGGACCCAGCTCTGT...AGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp CACAGAATGGGGGAGAGGCTGTCAGATTCTGAGCTCCAGAACCTCAGGTGTAGCAGGACCACTAGCTTCTaGCCAGCAGTCATGCCCTCC +
Preference number: 4 (lower is better)
Translates to: HRMGERLSDSELQNLRCSRTTSF*PAVMPS
Trigger: GGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCT...GCTACACCTGAGGTTCTGGAGCTCAGAATCTGACAGCCTCTCCCCCATTCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR TCA 90 bp TGGCCAGCAGTCATGCCCTCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGAGAATGTCCAGAGTCCTaGGAAGCTGGTCCACGTAGT +
Preference number: 4 (lower is better)
Translates to: WPAVMPSTELGPWKLHVGECPES*EAGPRS
Trigger: ACTACGTGGACCAGCTTCTCAGGACTCTGGACATTC...TCCTACATGCAATTTCCACGGACCCAGCTCTGTGGAGGGCATGACTGCTGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR TCA 90 bp CCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGCAGTCAGGCAGCGCTaGAGCTCCTGGAAGGCATTC +
Preference number: 4 (lower is better)
Translates to: PCSSSSWSGCQWPPVFKSAVRQR*SSWKAF
Trigger: GAATGCCTTCCAGGAGCTTCAGCGCTGCCTGACTGC...AGATTTAAAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR TCA 90 bp CACACAGAATGGGGGAGAGGCTGTCAGATTCTGAGCTCCAGAACCTCAGGTGTACTTGGCATCTGGACTTaGTCTGCTTGGGGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: HTEWGRGCQILSSRTSGVLGIWT*SAWGSG
Trigger: GCCTGACCCCCAAGCAGATCAAGTCCAGATGCCAAG...TACACCTGAGGTTCTGGAGCTCAGAATCTGACAGCCTCTCCCCCATTCTGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000350009.6
ENST00000356518.7
CDS-3UTR TCA 90 bp CCCTCAGGAACTTCTAATGTGGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTGGACTGATGGTTTATTaGGCTGGAGAGTGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: PSGTSNVALGSWSGWVEAGLMVY*AGECAQ
Trigger: CTGGGCACACTCTCCAGCTCAATAAACCATCAGTCC...AGCTTCGACCCACCCACTCCAGGAACCCAGAGCCACATTAGAAGTTCCTGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR TCA 90 bp TCACTGGCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCCTTTGCTTCTGGGACTaGTGGTTTATTGAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: SLALPLQFKFLEWLSVATLCFWD*WFIELE
Trigger: CTCCAGCTCAATAAACCATCAGTCCCAGAAGCAAAG...GGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGCCAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR TCA 90 bp GGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTCTTTGCTTCTGGGACTaGTGGTTTATTGAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: GWVEAPLGEETSKLPAGALCFWD*WFIELE
Trigger: CTCCAGCTCAATAAACCATCAGTCCCAGAAGCAAAG...AGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR TCA 90 bp GGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCTTTGCTTCTGGGACTaGTGGTTTATTGAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: GSGFLEWVGRSSTRGRNFLCFWD*WFIELE
Trigger: CTCCAGCTCAATAAACCATCAGTCCCAGAAGCAAAG...GAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAACCCAGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR TCA 90 bp CCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGCCTGCTTCAGCCTCCTaGGCAGCTAGGCCTACAGGT +
Preference number: 4 (lower is better)
Translates to: PAVQVPGVAVSGHLSLNLPASAS*AARPTG
Trigger: ACCTGTAGGCCTAGCTGCTCAGGAGGCTGAAGCAGG...CAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp AGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCTCTGCGCGCTTCTCGCCTaGCCCTGCTCTGGGGACCAC +
Preference number: 4 (lower is better)
Translates to: SGCQWPPVFKSVHFRSYLCALLA*PCSGDH
Trigger: GTGGTCCCCAGAGCAGGGGCAGGCGAGAAGCGCGCA...GAGGTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp TTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGGTTCAAGTTTCGGTaGCGAGTCAAGAACAGGGTG +
Preference number: 4 (lower is better)
Translates to: FLEWVGRSSTRGRNFQAAWFKFR*RVKNRV
Trigger: CACCCTGTTCTTGACTCGGCACCGAAACTTGAACCA...GGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp CCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGGGGAGGAGGTGCCCGTaGAAAACTCAGGGAGGTCAC +
Preference number: 4 (lower is better)
Translates to: PAVQVPGVAVSGHLSLNLGRRCP*KTQGGH
Trigger: GTGACCTCCCTGAGTTTTGCACGGGCACCTCCTCCC...CAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp CCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGCAGAGCTGCTGGCACTaGTGCTCCAGCGTGGGACAT +
Preference number: 4 (lower is better)
Translates to: PAVQVPGVAVSGHLSLNLQSCWH*CSSVGH
Trigger: ATGTCCCACGCTGGAGCAGCAGTGCCAGCAGCTCTG...CAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp TGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCCAGGCCCCCAGAGCTaGTGGCACTGCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: WSGCQWPPVFKSVHFRSYPGPQS*WHCCSS
Trigger: GCTGGAGCAGCAGTGCCAGCAGCTCTGGGGGCCTGG...GTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp CACACAGAATGGGGGAGAGGCTGTCAGATTCTGAGCTCCAGAACCTCAGGTGTATTTCCACCCTGGCACTaGAGCTTCCCACACAGGGCA +
Preference number: 4 (lower is better)
Translates to: HTEWGRGCQILSSRTSGVFPPWH*SFPHRA
Trigger: TGCCCTGTGTGGGAAGCTGCAGTGCCAGGGTGGAAA...TACACCTGAGGTTCTGGAGCTCAGAATCTGACAGCCTCTCCCCCATTCTGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp TGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAAGTGGCAGTTATGGTTaGTATTGCAAACCCCGTGGC +
Preference number: 4 (lower is better)
Translates to: WVEAPLGEETSKLPAGAGSGSYG*YCKPRG
Trigger: GCCACGGGGTTTGCAATAGCAACCATAACTGCCACT...TCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp TTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCAGTGGCAGTTATGGTTaGTATTGCAAACCCCGTGGC +
Preference number: 4 (lower is better)
Translates to: FLEWVGRSSTRGRNFQAASGSYG*YCKPRG
Trigger: GCCACGGGGTTTGCAATAGCAACCATAACTGCCACT...GGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp GTGACCTTTGCTTCTGGGACTGATGGTTTATTGAGCTGGAGAGTGTGCCCAGCATTCTGCAGCCCCAGCTaGATCGCTGCAGATGGGCTC +
Preference number: 4 (lower is better)
Translates to: VTFASGTDGLLSWRVCPAFCSPS*IAADGL
Trigger: GAGCCCATCTGCAGCGATGCAGCTGGGGCTGCAGAA...TGCTGGGCACACTCTCCAGCTCAATAAACCATCAGTCCCAGAAGCAAAGGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp GTGACCTTTGCTTCTGGGACTGATGGTTTATTGAGCTGGAGAGTGTGCCCAGCACATCTTTGGGGCCACTaGACGCAGGGTCCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: VTFASGTDGLLSWRVCPAHLWGH*TQGPFC
Trigger: GCAGAAGGGACCCTGCGTGCAGTGGCCCCAAAGATG...TGCTGGGCACACTCTCCAGCTCAATAAACCATCAGTCCCAGAAGCAAAGGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp TCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGAGACACACCAGACTCCCAGTTGAGCTGGAGAGTGTaGCCAGCAGTGTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: STELGPWKLHVGDTPDSQLSWRV*PAVFSS
Trigger: GCTGGAGAACACTGCTGGGCACACTCTCCAGCTCAA...CTGGGAGTCTGGTGTGTCTCCTACATGCAATTTCCACGGACCCAGCTCTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp CACAGAATGGGGGAGAGGCTGTCAGATTCTGAGCTCCAGAACCTCAGGTGTAGCTTGAGCTGGAGAGTGTaGCCAGCAGTGTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: HRMGERLSDSELQNLRCSLSWRV*PAVFSS
Trigger: GCTGGAGAACACTGCTGGGCACACTCTCCAGCTCAA...GCTACACCTGAGGTTCTGGAGCTCAGAATCTGACAGCCTCTCCCCCATTCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp GTGACCTTTGCTTCTGGGACTGATGGTTTATTGAGCTGGAGAGTGTGCCCAGCATCTGGCCAGCAGTCATaGCCTCCACAGAGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: VTFASGTDGLLSWRVCPASGQQS*PPQSWV
Trigger: GACCCAGCTCTGTGGAGGGCATGACTGCTGGCCAGA...TGCTGGGCACACTCTCCAGCTCAATAAACCATCAGTCCCAGAAGCAAAGGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp TGGCCAGCAGTCATGCCCTCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGAGCCACCATAGCTCACTaGAGTGTTGAACTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: WPAVMPSTELGPWKLHVGATIAH*SVELRL
Trigger: GAGCCTGAGTTCAACACTGCAGTGAGCTATGGTGGC...TCCTACATGCAATTTCCACGGACCCAGCTCTGTGGAGGGCATGACTGCTGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp TGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACAAGCACCCCGGCGCCTaGCACTGGCCAGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: WSGCQWPPVFKSVHFRSYKHPGA*HWPEQQ
Trigger: CTGCTGCTCTGGCCAGTGCCAGGCGCCGGGGTGCTT...GTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp CCCTCAGGAACTTCTAATGTGGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTGGTTTCTATGTATCCTaGGGCCAGCAGCCTGTGGTT +
Preference number: 4 (lower is better)
Translates to: PSGTSNVALGSWSGWVEAGFYVS*GQQPVV
Trigger: AACCACAGGCTGCTGGCCCCAGGATACATAGAAACC...AGCTTCGACCCACCCACTCCAGGAACCCAGAGCCACATTAGAAGTTCCTGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp TGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACGGGGGCCAGCACCACTaGCTGCCCATCTGGGCCGTA +
Preference number: 4 (lower is better)
Translates to: WSGCQWPPVFKSVHFRSYGGQHH*LPIWAV
Trigger: TACGGCCCAGATGGGCAGCCAGTGGTGCTGGCCCCC...GTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp CACACAGAATGGGGGAGAGGCTGTCAGATTCTGAGCTCCAGAACCTCAGGTGTAAATGATCCGTGTGGTTaGGGGCCAGCACCACTGGCT +
Preference number: 4 (lower is better)
Translates to: HTEWGRGCQILSSRTSGVNDPCG*GPAPLA
Trigger: AGCCAGTGGTGCTGGCCCCCAACCACACGGATCATT...TACACCTGAGGTTCTGGAGCTCAGAATCTGACAGCCTCTCCCCCATTCTGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp AGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTATCCGAAAGATCTCGTaGGTTGAGAAGTCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: SSTRGRNFQAACRCWRSGIRKIS*VEKSLE
Trigger: CTCCAAGGACTTCTCAACCCACGAGATCTTTCGGAT...ACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp CACACAGAATGGGGGAGAGGCTGTCAGATTCTGAGCTCCAGAACCTCAGGTGTAGACCACCAGGAAGGCTaGTCATGCCCGCTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: HTEWGRGCQILSSRTSGVDHQEG*SCPLCS
Trigger: GGAACAAAGCGGGCATGACCAGCCTTCCTGGTGGTC...TACACCTGAGGTTCTGGAGCTCAGAATCTGACAGCCTCTCCCCCATTCTGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp TCACTGGCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCGTCAAGAACAGGGTGTaGTCTGCCACAATGTACAGT +
Preference number: 4 (lower is better)
Translates to: SLALPLQFKFLEWLSVATVKNRV*SATMYS
Trigger: ACTGTACATTGTGGCAGACCACACCCTGTTCTTGAC...GGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGCCAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp GCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTAGACGCTGTTTGGTGTaGTTCAAGTTTCGGTGCCGA +
Preference number: 4 (lower is better)
Translates to: ALPLQFKFLEWLSVATCLRRCLV*FKFRCR
Trigger: TCGGCACCGAAACTTGAACCACACCAAACAGCGTCT...AAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp TTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCAGACGCTGTTTGGTGTaGTTCAAGTTTCGGTGCCGA +
Preference number: 4 (lower is better)
Translates to: FLEWVGRSSTRGRNFQAARRCLV*FKFRCR
Trigger: TCGGCACCGAAACTTGAACCACACCAAACAGCGTCT...GGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp CCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTCTGGGCTTTCCACCCTaGCACTGCAGCTTCCCACAC +
Preference number: 4 (lower is better)
Translates to: PCSSSSWSGCQWPPVFKSLGFPP*HCSFPH
Trigger: GTGTGGGAAGCTGCAGTGCCAGGGTGGAAAGCCCAG...AGATTTAAAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp CACAGAATGGGGGAGAGGCTGTCAGATTCTGAGCTCCAGAACCTCAGGTGTAGCATTCTAGGTCCACACTaGGTGCCTGGCTCTACCAGG +
Preference number: 4 (lower is better)
Translates to: HRMGERLSDSELQNLRCSILGPH*VPGSTR
Trigger: CCTGGTAGAGCCAGGCACCCAGTGTGGACCTAGAAT...GCTACACCTGAGGTTCTGGAGCTCAGAATCTGACAGCCTCTCCCCCATTCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp TTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCCAGCCTGGAGCACAGTaGCAGTTATGGTTGCTATTG +
Preference number: 4 (lower is better)
Translates to: FLEWVGRSSTRGRNFQAAQPGAQ*QLWLLL
Trigger: CAATAGCAACCATAACTGCCACTGTGCTCCAGGCTG...GGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp CCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGGGGTGGAGCCCAGCCTaGAGCACAGTGGCAGTTATG +
Preference number: 4 (lower is better)
Translates to: PAVQVPGVAVSGHLSLNLGWSPA*STVAVM
Trigger: CATAACTGCCACTGTGCTCCAGGCTGGGCTCCACCC...CAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp GGGACGCAGATAATAGCTGGCATTCCTGCTGAGGGTGATCAGGCCACTAGGGTGAGCAGGAAGGTGTCATaGTTTTCAGCCTGCACAGGG +
Preference number: 4 (lower is better)
Translates to: GTQIIAGIPAEGDQATRVSRKVS*FSACTG
Trigger: CCCTGTGCAGGCTGAAAACCATGACACCTTCCTGCT...CACCCTAGTGGCCTGATCACCCTCAGCAGGAATGCCAGCTATTATCTGCGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR CCA 90 bp TCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGAGACACACCAGACTCCCAGTCTCAGGGTGGCTGCTaGGCTCATGAGAGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: STELGPWKLHVGDTPDSQSQGGC*AHESSQ
Trigger: CTGAGAACTCTCATGAGCCCAGCAGCCACCCTGAGA...CTGGGAGTCTGGTGTGTCTCCTACATGCAATTTCCACGGACCCAGCTCTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp CCCTCAGGAACTTCTAATGTGGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTTTCAAGTTCCTGGAGTaGCTGTCAGTGGCCACCTGT +
Preference number: 4 (lower is better)
Translates to: PSGTSNVALGSWSGWVEAFKFLE*LSVATC
Trigger: ACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAA...AGCTTCGACCCACCCACTCCAGGAACCCAGAGCCACATTAGAAGTTCCTGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp CCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGGCTGCCTGCAGGTGCTaGAGGTCCGGTGATTCACTG +
Preference number: 4 (lower is better)
Translates to: PAVQVPGVAVSGHLSLNLAACRC*RSGDSL
Trigger: CAGTGAATCACCGGACCTCCAGCACCTGCAGGCAGC...CAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp GGCTTGAGCCCTGACCACCAATCCCAGCTCCCAGAAGGAAGTTTAACATGTTTTGGTTCCTGGAGTGGGTaGGTCGAAGCTCCACTCGGG +
Preference number: 4 (lower is better)
Translates to: GLSPDHQSQLPEGSLTCFGSWSG*VEAPLG
Trigger: CCCGAGTGGAGCTTCGACCCACCCACTCCAGGAACC...AAAACATGTTAAACTTCCTTCTGGGAGCTGGGATTGGTGGTCAGGGCTCAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR CCA 90 bp CCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTGGCTCTGGGTTCCTaGAGTGGGTGGGTCGAAGCT +
Preference number: 4 (lower is better)
Translates to: PCSSSSWSGCQWPPVFKSVALGS*SGWVEA
Trigger: AGCTTCGACCCACCCACTCCAGGAACCCAGAGCCAC...AGATTTAAAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp CAGCAGGACGCTGAGGAGCATGGCCAGCAGGAAGGTGTCATGGTTTTCAGCCTGCAGGAACTTCTAATGTaGCTCTGGGTTCCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: QQDAEEHGQQEGVMVFSLQELLM*LWVPGV
Trigger: CACTCCAGGAACCCAGAGCCACATTAGAAGTTCCTG...CAGGCTGAAAACCATGACACCTTCCTGCTGGCCATGCTCCTCAGCGTCCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR CCA 90 bp AGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTACAGAGCTGGGTCCGTaGAAATTGCATGTAGGAGAC +
Preference number: 4 (lower is better)
Translates to: SGWVEAPLGEETSKLPAGTELGP*KLHVGD
Trigger: GTCTCCTACATGCAATTTCCACGGACCCAGCTCTGT...ACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR TCA 90 bp CACACAGAATGGGGGAGAGGCTGTCAGATTCTGAGCTCCAGAACCTCAGGTGTAAAAGATCTCGTGGGTTaGGAAGTCCTTGGAGCCCCG +
Preference number: 4 (lower is better)
Translates to: HTEWGRGCQILSSRTSGVKDLVG*EVLGAP
Trigger: CGGGGCTCCAAGGACTTCTCAACCCACGAGATCTTT...TACACCTGAGGTTCTGGAGCTCAGAATCTGACAGCCTCTCCCCCATTCTGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR TCA 90 bp GTGACCTTTGCTTCTGGGACTGATGGTTTATTGAGCTGGAGAGTGTGCCCAGCATGGCCGCAGTTTCCATaGGCATCTCCCGCAGAGTTC +
Preference number: 4 (lower is better)
Translates to: VTFASGTDGLLSWRVCPAWPQFP*ASPAEF
Trigger: GAACTCTGCGGGAGATGCTCATGGAAACTGCGGCCA...TGCTGGGCACACTCTCCAGCTCAATAAACCATCAGTCCCAGAAGCAAAGGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR TCA 90 bp CCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTTGGCCGCAGTTTCCATaGGCATCTCCCGCAGAGTTC +
Preference number: 4 (lower is better)
Translates to: PCSSSSWSGCQWPPVFKSWPQFP*ASPAEF
Trigger: GAACTCTGCGGGAGATGCTCATGGAAACTGCGGCCA...AGATTTAAAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR TCA 90 bp GTGACCTTTGCTTCTGGGACTGATGGTTTATTGAGCTGGAGAGTGTGCCCAGCATCCTGGCCATCTAGGTaGACGGTAGAGTCCACTGGC +
Preference number: 4 (lower is better)
Translates to: VTFASGTDGLLSWRVCPASWPSR*TVESTG
Trigger: GCCAGTGGACTCTACCGTTCACCTAGATGGCCAGGA...TGCTGGGCACACTCTCCAGCTCAATAAACCATCAGTCCCAGAAGCAAAGGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR TCA 90 bp CCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTTCCTGGCCATCTAGGTaGACGGTAGAGTCCACTGGC +
Preference number: 4 (lower is better)
Translates to: PCSSSSWSGCQWPPVFKSSWPSR*TVESTG
Trigger: GCCAGTGGACTCTACCGTTCACCTAGATGGCCAGGA...AGATTTAAAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp TGGCCAGCAGTCATGCCCTCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGAGAACAGGGTGTGGTCTaGCACAATGTACAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: WPAVMPSTELGPWKLHVGEQGVV*HNVQFQ
Trigger: CTGGAACTGTACATTGTGGCAGACCACACCCTGTTC...TCCTACATGCAATTTCCACGGACCCAGCTCTGTGGAGGGCATGACTGCTGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp CCCTCAGGAACTTCTAATGTGGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTGAACAGGGTGTGGTCTaGCACAATGTACAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: PSGTSNVALGSWSGWVEAEQGVV*HNVQFQ
Trigger: CTGGAACTGTACATTGTGGCAGACCACACCCTGTTC...AGCTTCGACCCACCCACTCCAGGAACCCAGAGCCACATTAGAAGTTCCTGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp CCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTCAAGCTGCCTGCAGGTaGTGGAGGTCCGGTGATTCA +
Preference number: 4 (lower is better)
Translates to: PCSSSSWSGCQWPPVFKSQAACR*WRSGDS
Trigger: TGAATCACCGGACCTCCAGCACCTGCAGGCAGCTTG...AGATTTAAAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp CACAGAATGGGGGAGAGGCTGTCAGATTCTGAGCTCCAGAACCTCAGGTGTAGCGCCACCATAGCTCACTaGAGTGTTGAACTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: HRMGERLSDSELQNLRCSATIAH*SVELRL
Trigger: GAGCCTGAGTTCAACACTGCAGTGAGCTATGGTGGC...GCTACACCTGAGGTTCTGGAGCTCAGAATCTGACAGCCTCTCCCCCATTCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp TCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGAGACACACCAGACTCCCAGGGTTTCTATGTATCCTaGGGCCAGCAGCCTGTGGTT +
Preference number: 4 (lower is better)
Translates to: STELGPWKLHVGDTPDSQGFYVS*GQQPVV
Trigger: AACCACAGGCTGCTGGCCCCAGGATACATAGAAACC...CTGGGAGTCTGGTGTGTCTCCTACATGCAATTTCCACGGACCCAGCTCTGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp AGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTATCCGAAAGATCTCGTaGGTTGAGAAGTCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: SGWVEAPLGEETSKLPAGIRKIS*VEKSLE
Trigger: CTCCAAGGACTTCTCAACCCACGAGATCTTTCGGAT...ACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp TGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAATCCGAAAGATCTCGTaGGTTGAGAAGTCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: WVEAPLGEETSKLPAGAGIRKIS*VEKSLE
Trigger: CTCCAAGGACTTCTCAACCCACGAGATCTTTCGGAT...TCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp CACACAGAATGGGGGAGAGGCTGTCAGATTCTGAGCTCCAGAACCTCAGGTGTATTCCCAGGATCCCTGTaGCCACAGGTTCCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: HTEWGRGCQILSSRTSGVFPGSL*PQVPFQ
Trigger: CTGGAAAGGAACCTGTGGCCACAGGGATCCTGGGAA...TACACCTGAGGTTCTGGAGCTCAGAATCTGACAGCCTCTCCCCCATTCTGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp GTGACCTTTGCTTCTGGGACTGATGGTTTATTGAGCTGGAGAGTGTGCCCAGCAGACCACCAGGAAGGCTaGTCATGCCCGCTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: VTFASGTDGLLSWRVCPADHQEG*SCPLCS
Trigger: GGAACAAAGCGGGCATGACCAGCCTTCCTGGTGGTC...TGCTGGGCACACTCTCCAGCTCAATAAACCATCAGTCCCAGAAGCAAAGGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp GCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTGTCAAGAACAGGGTGTaGTCTGCCACAATGTACAGT +
Preference number: 4 (lower is better)
Translates to: ALPLQFKFLEWLSVATCLVKNRV*SATMYS
Trigger: ACTGTACATTGTGGCAGACCACACCCTGTTCTTGAC...AAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp CCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGCAGAGTTCACCACCTaGAAACAGGCCTCGGGAGCT +
Preference number: 4 (lower is better)
Translates to: PCSSSSWSGCQWPPVFKSAEFTT*KQASGA
Trigger: AGCTCCCGAGGCCTGTTTCCAGGTGGTGAACTCTGC...AGATTTAAAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp CCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTCTATTGCAAACCCCGTaGCTGTGGCAGGCAGTCAGG +
Preference number: 4 (lower is better)
Translates to: PCSSSSWSGCQWPPVFKSLLQTP*LWQAVR
Trigger: CCTGACTGCCTGCCACAGCCACGGGGTTTGCAATAG...AGATTTAAAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp TCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGAGACACACCAGACTCCCAGAGCAGGAAGGTGTCATaGTTTTCAGCCTGCACAGGG +
Preference number: 4 (lower is better)
Translates to: STELGPWKLHVGDTPDSQSRKVS*FSACTG
Trigger: CCCTGTGCAGGCTGAAAACCATGACACCTTCCTGCT...CTGGGAGTCTGGTGTGTCTCCTACATGCAATTTCCACGGACCCAGCTCTGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp CACAGAATGGGGGAGAGGCTGTCAGATTCTGAGCTCCAGAACCTCAGGTGTAGCAGCAGGAAGGTGTCATaGTTTTCAGCCTGCACAGGG +
Preference number: 4 (lower is better)
Translates to: HRMGERLSDSELQNLRCSSRKVS*FSACTG
Trigger: CCCTGTGCAGGCTGAAAACCATGACACCTTCCTGCT...GCTACACCTGAGGTTCTGGAGCTCAGAATCTGACAGCCTCTCCCCCATTCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp TCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGAGACACACCAGACTCCCAGTGCAGTTCAAGTTCCTaGAGTGGCTGTCAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: STELGPWKLHVGDTPDSQCSSSS*SGCQWP
Trigger: TGGCCACTGACAGCCACTCCAGGAACTTGAACTGCA...CTGGGAGTCTGGTGTGTCTCCTACATGCAATTTCCACGGACCCAGCTCTGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp CACAGAATGGGGGAGAGGCTGTCAGATTCTGAGCTCCAGAACCTCAGGTGTAGCTGCAGTTCAAGTTCCTaGAGTGGCTGTCAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: HRMGERLSDSELQNLRCSCSSSS*SGCQWP
Trigger: TGGCCACTGACAGCCACTCCAGGAACTTGAACTGCA...GCTACACCTGAGGTTCTGGAGCTCAGAATCTGACAGCCTCTCCCCCATTCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp GTGACCTTTGCTTCTGGGACTGATGGTTTATTGAGCTGGAGAGTGTGCCCAGCATCTGGGTTCCTGGAGTaGGTGGGTCGAAGCTCCACT +
Preference number: 4 (lower is better)
Translates to: VTFASGTDGLLSWRVCPASGFLE*VGRSST
Trigger: AGTGGAGCTTCGACCCACCCACTCCAGGAACCCAGA...TGCTGGGCACACTCTCCAGCTCAATAAACCATCAGTCCCAGAAGCAAAGGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp TGGCCAGCAGTCATGCCCTCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGACAGGAACTTCTAATGTaGCTCTGGGTTCCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: WPAVMPSTELGPWKLHVGQELLM*LWVPGV
Trigger: CACTCCAGGAACCCAGAGCCACATTAGAAGTTCCTG...TCCTACATGCAATTTCCACGGACCCAGCTCTGTGGAGGGCATGACTGCTGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp GGGACGCAGATAATAGCTGGCATTCCTGCTGAGGGTGATCAGGCCACTAGGGTGACAGAGCTGGGTCCGTaGAAATTGCATGTAGGAGAC +
Preference number: 4 (lower is better)
Translates to: GTQIIAGIPAEGDQATRVTELGP*KLHVGD
Trigger: GTCTCCTACATGCAATTTCCACGGACCCAGCTCTGT...CACCCTAGTGGCCTGATCACCCTCAGCAGGAATGCCAGCTATTATCTGCGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR CCA 90 bp CCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGGCTCCAGGGGAGTGTaGACTCAGTCGAACCATAGG +
Preference number: 4 (lower is better)
Translates to: PCSSSSWSGCQWPPVFKSGSRGV*TQSNHR
Trigger: CCTATGGTTCGACTGAGTCCACACTCCCCTGGAGCC...AGATTTAAAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp AGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCTCGGGTGTGGTAGGGGCTaGCTCCAACCGCCCCTTAGG +
Preference number: 4 (lower is better)
Translates to: SGCQWPPVFKSVHFRSYLGCGRG*LQPPLR
Trigger: CCTAAGGGGCGGTTGGAGCCAGCCCCTACCACACCC...GAGGTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR TCA 90 bp CCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGAGGTTCCTTTCCAGGTaGGCAGCTGCTCCATCCGAA +
Preference number: 4 (lower is better)
Translates to: PAVQVPGVAVSGHLSLNLRFLSR*AAAPSE
Trigger: TTCGGATGGAGCAGCTGCTCACCTGGAAAGGAACCT...CAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR TCA 90 bp TGGCCAGCAGTCATGCCCTCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGACTTTGCTTCTGGGACTaGTGGTTTATTGAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: WPAVMPSTELGPWKLHVGLCFWD*WFIELE
Trigger: CTCCAGCTCAATAAACCATCAGTCCCAGAAGCAAAG...TCCTACATGCAATTTCCACGGACCCAGCTCTGTGGAGGGCATGACTGCTGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR TCA 90 bp CCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGGAACTCAGGCTCAAGTaGTCCTCCTGCTTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: PAVQVPGVAVSGHLSLNLELRLK*SSCFSL
Trigger: GAGGCTGAAGCAGGAGGATCACTTGAGCCTGAGTTC...CAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp AGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCTCCTTCTCGCCTGCCCCTaGTCTGGGGACCACCAGGAA +
Preference number: 4 (lower is better)
Translates to: SGCQWPPVFKSVHFRSYLLLACP*SGDHQE
Trigger: TTCCTGGTGGTCCCCAGAGCAGGGGCAGGCGAGAAG...GAGGTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp CACAGAATGGGGGAGAGGCTGTCAGATTCTGAGCTCCAGAACCTCAGGTGTAGCGAACAGGGTGTGGTCTaGCACAATGTACAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: HRMGERLSDSELQNLRCSEQGVV*HNVQFQ
Trigger: CTGGAACTGTACATTGTGGCAGACCACACCCTGTTC...GCTACACCTGAGGTTCTGGAGCTCAGAATCTGACAGCCTCTCCCCCATTCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp GGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCTCTCACCCCAGCTGCATCGCTaGAGATGGGCTCCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: GCQWPPVFKSVHFRSYLSPQLHR*RWAPGS
Trigger: ACTCCCAGGAGCCCATCTGCAGCGATGCAGCTGGGG...TGAGAGGTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR GCA 90 bp GTGACCTTTGCTTCTGGGACTGATGGTTTATTGAGCTGGAGAGTGTGCCCAGCAGCTTCTCAGGGTGGCTaGTGGGCTCATGAGAGTTCT +
Preference number: 4 (lower is better)
Translates to: VTFASGTDGLLSWRVCPAASQGG*WAHESS
Trigger: AGAACTCTCATGAGCCCAGCAGCCACCCTGAGAAGC...TGCTGGGCACACTCTCCAGCTCAATAAACCATCAGTCCCAGAAGCAAAGGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp GTGACCTTTGCTTCTGGGACTGATGGTTTATTGAGCTGGAGAGTGTGCCCAGCACACTGGCTCTGCCCCTaGAGTTCAAGTTCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: VTFASGTDGLLSWRVCPAHWLCP*SSSSWS
Trigger: ACTCCAGGAACTTGAACTGCAGGGGCAGAGCCAGTG...TGCTGGGCACACTCTCCAGCTCAATAAACCATCAGTCCCAGAAGCAAAGGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp CCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGCACTGGCTCTGCCCCTaGAGTTCAAGTTCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: PAVQVPGVAVSGHLSLNLHWLCP*SSSSWS
Trigger: ACTCCAGGAACTTGAACTGCAGGGGCAGAGCCAGTG...CAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp GCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTAAAATTATGTTTGTTTaGAGAGGCCAGCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: ALPLQFKFLEWLSVATCLKIMFV*RGQPGS
Trigger: GGAGCCTGGCTGGCCTCTGCAAACAAACATAATTTT...AAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp CCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTCACTGGCTGCCCATCTaGGCCGTAGTGGGTTTCTAT +
Preference number: 4 (lower is better)
Translates to: PCSSSSWSGCQWPPVFKSHWLPI*AVVGFY
Trigger: ATAGAAACCCACTACGGCCCAGATGGGCAGCCAGTG...AGATTTAAAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp CACAGAATGGGGGAGAGGCTGTCAGATTCTGAGCTCCAGAACCTCAGGTGTAGCCCAGGAGACGCTGTTTaGTGTGGTTCAAGTTTCGGT +
Preference number: 4 (lower is better)
Translates to: HRMGERLSDSELQNLRCSPGDAV*CGSSFG
Trigger: ACCGAAACTTGAACCACACCAAACAGCGTCTCCTGG...GCTACACCTGAGGTTCTGGAGCTCAGAATCTGACAGCCTCTCCCCCATTCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp AGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCTCCTGAGGCCGAGGCTGTaGCCGATCTCATGGGCCATG +
Preference number: 4 (lower is better)
Translates to: SGCQWPPVFKSVHFRSYLLRPRL*PISWAM
Trigger: CATGGCCCATGAGATCGGCCACAGCCTCGGCCTCAG...GAGGTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS-3UTR CCA 90 bp TGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCTGAGGCCGAGGCTGTaGCCGATCTCATGGGCCATG +
Preference number: 4 (lower is better)
Translates to: WSGCQWPPVFKSVHFRSYLRPRL*PISWAM
Trigger: CATGGCCCATGAGATCGGCCACAGCCTCGGCCTCAG...GTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS-3UTR CCA 90 bp AGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCTCACTGCTGCTCCAGCGTaGGACATGCGCCATCCCAGC +
Preference number: 4 (lower is better)
Translates to: SGCQWPPVFKSVHFRSYLTAAPA*DMRHPS
Trigger: GCTGGGATGGCGCATGTCCCACGCTGGAGCAGCAGT...GAGGTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp CACAGAATGGGGGAGAGGCTGTCAGATTCTGAGCTCCAGAACCTCAGGTGTAGCCAGCCTGGAGCACAGTaGCAGTTATGGTTGCTATTG +
Preference number: 4 (lower is better)
Translates to: HRMGERLSDSELQNLRCSQPGAQ*QLWLLL
Trigger: CAATAGCAACCATAACTGCCACTGTGCTCCAGGCTG...GCTACACCTGAGGTTCTGGAGCTCAGAATCTGACAGCCTCTCCCCCATTCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp GGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCTCTCAGGGGTGGTCCCTGTGTaGGCCATCTTTGGGGCCACT +
Preference number: 4 (lower is better)
Translates to: GCQWPPVFKSVHFRSYLSGVVPV*AIFGAT
Trigger: AGTGGCCCCAAAGATGGCCCACACAGGGACCACCCC...TGAGAGGTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR CCA 90 bp TGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACGCTGTCCAGTGGCTGTaGGGCCCAACTCCATGGGGT +
Preference number: 4 (lower is better)
Translates to: WSGCQWPPVFKSVHFRSYAVQWL*GPTPWG
Trigger: ACCCCATGGAGTTGGGCCCCACAGCCACTGGACAGC...GTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp AGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCTCGGTTCCTGGAGTGGGTaGGTCGAAGCTCCACTCGGG +
Preference number: 4 (lower is better)
Translates to: SGCQWPPVFKSVHFRSYLGSWSG*VEAPLG
Trigger: CCCGAGTGGAGCTTCGACCCACCCACTCCAGGAACC...GAGGTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp CACAGAATGGGGGAGAGGCTGTCAGATTCTGAGCTCCAGAACCTCAGGTGTAGCCAGGAACTTCTAATGTaGCTCTGGGTTCCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: HRMGERLSDSELQNLRCSQELLM*LWVPGV
Trigger: CACTCCAGGAACCCAGAGCCACATTAGAAGTTCCTG...GCTACACCTGAGGTTCTGGAGCTCAGAATCTGACAGCCTCTCCCCCATTCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp CCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTAGGACAGAGCCCTTTTaGGATGGCCAGCACTACCCA +
Preference number: 4 (lower is better)
Translates to: PCSSSSWSGCQWPPVFKSRTEPF*DGQHYP
Trigger: TGGGTAGTGCTGGCCATCCCAAAAGGGCTCTGTCCT...AGATTTAAAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR TCA 90 bp CCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGGAATGTCCAGAGTCCTaGGAAGCTGGTCCACGTAGT +
Preference number: 4 (lower is better)
Translates to: PAVQVPGVAVSGHLSLNLECPES*EAGPRS
Trigger: ACTACGTGGACCAGCTTCTCAGGACTCTGGACATTC...CAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR TCA 90 bp TGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACGCAGTCAGGCAGCGCTaGAGCTCCTGGAAGGCATTC +
Preference number: 4 (lower is better)
Translates to: WSGCQWPPVFKSVHFRSYAVRQR*SSWKAF
Trigger: GAATGCCTTCCAGGAGCTTCAGCGCTGCCTGACTGC...GTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR TCA 90 bp GTGACCTTTGCTTCTGGGACTGATGGTTTATTGAGCTGGAGAGTGTGCCCAGCAGGACTGATGGTTTATTaGGCTGGAGAGTGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: VTFASGTDGLLSWRVCPAGLMVY*AGECAQ
Trigger: CTGGGCACACTCTCCAGCTCAATAAACCATCAGTCC...TGCTGGGCACACTCTCCAGCTCAATAAACCATCAGTCCCAGAAGCAAAGGTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp AGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCTCCAGAGCTGCTGGCACTaGTGCTCCAGCGTGGGACAT +
Preference number: 4 (lower is better)
Translates to: SGCQWPPVFKSVHFRSYLQSCWH*CSSVGH
Trigger: ATGTCCCACGCTGGAGCAGCAGTGCCAGCAGCTCTG...GAGGTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp CCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTGATTCACTGGCTCTaGCCCTGCAGTTCAAGTTCC +
Preference number: 4 (lower is better)
Translates to: PCSSSSWSGCQWPPVFKSVIHWL*PCSSSS
Trigger: GGAACTTGAACTGCAGGGGCAGAGCCAGTGAATCAC...AGATTTAAAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp TGGCCAGCAGTCATGCCCTCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGAAAAATTATGTTTGTTTaGAGAGGCCAGCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: WPAVMPSTELGPWKLHVGKIMFV*RGQPGS
Trigger: GGAGCCTGGCTGGCCTCTGCAAACAAACATAATTTT...TCCTACATGCAATTTCCACGGACCCAGCTCTGTGGAGGGCATGACTGCTGGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp CACACAGAATGGGGGAGAGGCTGTCAGATTCTGAGCTCCAGAACCTCAGGTGTAAGACGCTGTTTGGTGTaGTTCAAGTTTCGGTGCCGA +
Preference number: 4 (lower is better)
Translates to: HTEWGRGCQILSSRTSGVRRCLV*FKFRCR
Trigger: TCGGCACCGAAACTTGAACCACACCAAACAGCGTCT...TACACCTGAGGTTCTGGAGCTCAGAATCTGACAGCCTCTCCCCCATTCTGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp CCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTAGCAGGAAGGTGTCATaGTTTTCAGCCTGCACAGGG +
Preference number: 4 (lower is better)
Translates to: PCSSSSWSGCQWPPVFKSSRKVS*FSACTG
Trigger: CCCTGTGCAGGCTGAAAACCATGACACCTTCCTGCT...AGATTTAAAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp CCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCAAGTTCCTGGAGTaGCTGTCAGTGGCCACCTGT +
Preference number: 4 (lower is better)
Translates to: PAVQVPGVAVSGHLSLNLFKFLE*LSVATC
Trigger: ACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAA...CAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp TGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACGCTGCCTGCAGGTGCTaGAGGTCCGGTGATTCACTG +
Preference number: 4 (lower is better)
Translates to: WSGCQWPPVFKSVHFRSYAACRC*RSGDSL
Trigger: CAGTGAATCACCGGACCTCCAGCACCTGCAGGCAGC...GTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp AGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCTCGCTGCCTGCAGGTGCTaGAGGTCCGGTGATTCACTG +
Preference number: 4 (lower is better)
Translates to: SGCQWPPVFKSVHFRSYLAACRC*RSGDSL
Trigger: CAGTGAATCACCGGACCTCCAGCACCTGCAGGCAGC...GAGGTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp CCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTCCGACACACACAGAATaGGGGAGAGGCTGTCAGATT +
Preference number: 4 (lower is better)
Translates to: PCSSSSWSGCQWPPVFKSPTHTE*GRGCQI
Trigger: AATCTGACAGCCTCTCCCCCATTCTGTGTGTGTCGG...AGATTTAAAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR TCA 90 bp TGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACTCCTGGCCATCTAGGTaGACGGTAGAGTCCACTGGC +
Preference number: 4 (lower is better)
Translates to: WSGCQWPPVFKSVHFRSYSWPSR*TVESTG
Trigger: GCCAGTGGACTCTACCGTTCACCTAGATGGCCAGGA...GTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp TGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACTTTCCACCCTGGCACTaGAGCTTCCCACACAGGGCA +
Preference number: 4 (lower is better)
Translates to: WSGCQWPPVFKSVHFRSYFPPWH*SFPHRA
Trigger: TGCCCTGTGTGGGAAGCTGCAGTGCCAGGGTGGAAA...GTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR GCA 90 bp TGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACGGCCACTGTCCATGCTaGCACCAAAGCCTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: WSGCQWPPVFKSVHFRSYGHCPC*HQSLAC
Trigger: ACAAGCCAGGCTTTGGTGGCAGCATGGACAGTGGCC...GTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp AGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCTCCAAGCTGCCTGCAGGTaGTGGAGGTCCGGTGATTCA +
Preference number: 4 (lower is better)
Translates to: SGCQWPPVFKSVHFRSYLQAACR*WRSGDS
Trigger: TGAATCACCGGACCTCCAGCACCTGCAGGCAGCTTG...GAGGTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp TCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGAGACACACCAGACTCCCAGAAAATTATGTTTGTTTaGAGAGGCCAGCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: STELGPWKLHVGDTPDSQKIMFV*RGQPGS
Trigger: GGAGCCTGGCTGGCCTCTGCAAACAAACATAATTTT...CTGGGAGTCTGGTGTGTCTCCTACATGCAATTTCCACGGACCCAGCTCTGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp AGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCTCAATGATCCGTGTGGTTaGGGGCCAGCACCACTGGCT +
Preference number: 4 (lower is better)
Translates to: SGCQWPPVFKSVHFRSYLNDPCG*GPAPLA
Trigger: AGCCAGTGGTGCTGGCCCCCAACCACACGGATCATT...GAGGTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp AGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCTCGACCACCAGGAAGGCTaGTCATGCCCGCTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: SGCQWPPVFKSVHFRSYLDHQEG*SCPLCS
Trigger: GGAACAAAGCGGGCATGACCAGCCTTCCTGGTGGTC...GAGGTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp CCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGCCAGGAGACGCTGTTTaGTGTGGTTCAAGTTTCGGT +
Preference number: 4 (lower is better)
Translates to: PAVQVPGVAVSGHLSLNLPGDAV*CGSSFG
Trigger: ACCGAAACTTGAACCACACCAAACAGCGTCTCCTGG...CAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp AGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCTCAACGGTAGAGTCCACTaGCACCATGTGCGGTGCGAG +
Preference number: 4 (lower is better)
Translates to: SGCQWPPVFKSVHFRSYLNGRVH*HHVRCE
Trigger: CTCGCACCGCACATGGTGCCAGTGGACTCTACCGTT...GAGGTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp TGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCTATTGCAAACCCCGTaGCTGTGGCAGGCAGTCAGG +
Preference number: 4 (lower is better)
Translates to: WSGCQWPPVFKSVHFRSYLLQTP*LWQAVR
Trigger: CCTGACTGCCTGCCACAGCCACGGGGTTTGCAATAG...GTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp TGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCTGCAGATGGGCTCCTaGGAGTCGGTAGCAACACCA +
Preference number: 4 (lower is better)
Translates to: WSGCQWPPVFKSVHFRSYLQMGS*ESVATP
Trigger: TGGTGTTGCTACCGACTCCCAGGAGCCCATCTGCAG...GTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp GGCTTGAGCCCTGACCACCAATCCCAGCTCCCAGAAGGAAGTTTAACATGTTTTTTCAAGTTCCTGGAGTaGCTGTCAGTGGCCACCTGT +
Preference number: 4 (lower is better)
Translates to: GLSPDHQSQLPEGSLTCFFKFLE*LSVATC
Trigger: ACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAA...AAAACATGTTAAACTTCCTTCTGGGAGCTGGGATTGGTGGTCAGGGCTCAAGCC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR CCA 90 bp AGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCTCGGTCCGGTGATTCACTaGCTCTGCCCCTGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: SGCQWPPVFKSVHFRSYLGPVIH*LCPCSS
Trigger: TGAACTGCAGGGGCAGAGCCAGTGAATCACCGGACC...GAGGTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp AGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCTCAGGACCACTAGCTTCTaGCCAGCAGTCATGCCCTCC +
Preference number: 4 (lower is better)
Translates to: SGCQWPPVFKSVHFRSYLRTTSF*PAVMPS
Trigger: GGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCT...GAGGTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp CCCTCAGGAACTTCTAATGTGGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTGCACAGTGGCAGTTATaGTTGCTATTGCAAACCATT +
Preference number: 4 (lower is better)
Translates to: PSGTSNVALGSWSGWVEAAQWQL*LLLQTI
Trigger: AATGGTTTGCAATAGCAACCATAACTGCCACTGTGC...AGCTTCGACCCACCCACTCCAGGAACCCAGAGCCACATTAGAAGTTCCTGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350009.6
CDS-3UTR CCA 90 bp AGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCTCAAGCATCTCACCGTGTaGTTGGGGGCCAGCACCACT +
Preference number: 4 (lower is better)
Translates to: SGCQWPPVFKSVHFRSYLKHLTV*LGASTT
Trigger: AGTGGTGCTGGCCCCCAACCACACGGTGAGATGCTT...GAGGTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR TCA 90 bp TGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACAAAGATCTCGTGGGTTaGGAAGTCCTTGGAGCCCCG +
Preference number: 4 (lower is better)
Translates to: WSGCQWPPVFKSVHFRSYKDLVG*EVLGAP
Trigger: CGGGGCTCCAAGGACTTCTCAACCCACGAGATCTTT...GTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR TCA 90 bp AGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCTCAAAGATCTCGTGGGTTaGGAAGTCCTTGGAGCCCCG +
Preference number: 4 (lower is better)
Translates to: SGCQWPPVFKSVHFRSYLKDLVG*EVLGAP
Trigger: CGGGGCTCCAAGGACTTCTCAACCCACGAGATCTTT...GAGGTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR TCA 90 bp AGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCTCAGGTTCCTTTCCAGGTaGGCAGCTGCTCCATCCGAA +
Preference number: 4 (lower is better)
Translates to: SGCQWPPVFKSVHFRSYLRFLSR*AAAPSE
Trigger: TTCGGATGGAGCAGCTGCTCACCTGGAAAGGAACCT...GAGGTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR TCA 90 bp CCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGCTTTGCTTCTGGGACTaGTGGTTTATTGAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: PAVQVPGVAVSGHLSLNLLCFWD*WFIELE
Trigger: CTCCAGCTCAATAAACCATCAGTCCCAGAAGCAAAG...CAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp TGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACGCTTCTCAGGGTGGCTaGTGGGCTCATGAGAGTTCT +
Preference number: 4 (lower is better)
Translates to: WSGCQWPPVFKSVHFRSYASQGG*WAHESS
Trigger: AGAACTCTCATGAGCCCAGCAGCCACCCTGAGAAGC...GTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp TGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACAGGACAGAGCCCTTTTaGGATGGCCAGCACTACCCA +
Preference number: 4 (lower is better)
Translates to: WSGCQWPPVFKSVHFRSYRTEPF*DGQHYP
Trigger: TGGGTAGTGCTGGCCATCCCAAAAGGGCTCTGTCCT...GTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp TGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACTCATGGTTTTCAGCCTaGACAGGGCCACTGTCCATG +
Preference number: 4 (lower is better)
Translates to: WSGCQWPPVFKSVHFRSYSWFSA*TGPLSM
Trigger: CATGGACAGTGGCCCTGTGCAGGCTGAAAACCATGA...GTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR GCA 90 bp AGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCTCGTGATTCACTGGCTCTaGCCCTGCAGTTCAAGTTCC +
Preference number: 4 (lower is better)
Translates to: SGCQWPPVFKSVHFRSYLVIHWL*PCSSSS
Trigger: GGAACTTGAACTGCAGGGGCAGAGCCAGTGAATCAC...GAGGTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp AGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCTCGGTTTCTATGTATCCTaGGGCCAGCAGCCTGTGGTT +
Preference number: 4 (lower is better)
Translates to: SGCQWPPVFKSVHFRSYLGFYVS*GQQPVV
Trigger: AACCACAGGCTGCTGGCCCCAGGATACATAGAAACC...GAGGTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp TGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCAGCCTGGAGCACAGTaGCAGTTATGGTTGCTATTG +
Preference number: 4 (lower is better)
Translates to: WSGCQWPPVFKSVHFRSYQPGAQ*QLWLLL
Trigger: CAATAGCAACCATAACTGCCACTGTGCTCCAGGCTG...GTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp AGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCTCGATGGTTTATTGAGCTaGAGAGTGTGCCCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: SGCQWPPVFKSVHFRSYLDGLLS*RVCPAV
Trigger: CACTGCTGGGCACACTCTCCAGCTCAATAAACCATC...GAGGTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp AGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCTCATCCGAAAGATCTCGTaGGTTGAGAAGTCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: SGCQWPPVFKSVHFRSYLIRKIS*VEKSLE
Trigger: CTCCAAGGACTTCTCAACCCACGAGATCTTTCGGAT...GAGGTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CCA 90 bp AGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCTCGTCAAGAACAGGGTGTaGTCTGCCACAATGTACAGT +
Preference number: 4 (lower is better)
Translates to: SGCQWPPVFKSVHFRSYLVKNRV*SATMYS
Trigger: ACTGTACATTGTGGCAGACCACACCCTGTTCTTGAC...GAGGTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CCA 90 bp AGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCTCCCGTCTCTTCTGATTTaGAGGGCTATAGATACAGCA +
Preference number: 4 (lower is better)
Translates to: SGCQWPPVFKSVHFRSYLPSLLI*RAIDTA
Trigger: TGCTGTATCTATAGCCCTCCAAATCAGAAGAGACGG...GAGGTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS GCA 90 bp TGCGCGGAGTCGTGGGGCCGCTGCGCCCACAGCCCCCGGCGCCACTaGAGGAAGGCCCAGAGCGTGGCGTTGGCGTCCTGCGTGACGCGG +
Preference number: 5 (lower is better)
Translates to: CAESWGRCAHSPRRH*RKAQSVALASCVTR
Trigger: CCGCGTCACGCAGGACGCCAACGCCACGCTCTGGGCCTTCCTGCAGTGGCGCCGGGGGCTGTGGGCGCAGCGGCCCCACGACTCCGCGCA
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS CCA 90 bp CCTCGGCCTCTAGGCAGCGGCTCGCAACTCCGGCTCCGCCCAGGCTaGATTGCGGCCGACCCGTGCCCGGTGCAGCCTCAGGCCGCCGCC +
Preference number: 5 (lower is better)
Translates to: PRPLGSGSQLRLRPG*IAADPCPVQPQAAA
Trigger: GGCGGCGGCCTGAGGCTGCACCGGGCACGGGTCGGCCGCAATCCAGCCTGGGCGGAGCCGGAGTTGCGAGCCGCTGCCTAGAGGCCGAGG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000379861.8
ENST00000619289.4
CDS GCA 90 bp CCCCGGCGCCACTGCAGGAAGGCCCAGAGCGTGGCGTTGGCGTCCTaGGTGACGCGGCTGCGGTCCCGCTCGGTCCACACCTCCAGGCCG +
Preference number: 5 (lower is better)
Translates to: PRRHCRKAQSVALAS*VTRLRSRSVHTSRP
Trigger: CGGCCTGGAGGTGTGGACCGAGCGGGACCGCAGCCGCGTCACGCAGGACGCCAACGCCACGCTCTGGGCCTTCCTGCAGTGGCGCCGGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS GCA 90 bp GCCTCTAGGCAGCGGCTCGCAACTCCGGCTCCGCCCAGGCTGGATTaGGGCCGACCCGTGCCCGGTGCAGCCTCAGGCCGCCGCCTTCGG +
Preference number: 5 (lower is better)
Translates to: ASRQRLATPAPPRLD*GRPVPGAASGRRLR
Trigger: CCGAAGGCGGCGGCCTGAGGCTGCACCGGGCACGGGTCGGCCGCAATCCAGCCTGGGCGGAGCCGGAGTTGCGAGCCGCTGCCTAGAGGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000379861.8
ENST00000619289.4
CDS TCA 90 bp GGCGCCACTGCAGGAAGGCCCAGAGCGTGGCGTTGGCGTCCTGCGTaGCGCGGCTGCGGTCCCGCTCGGTCCACACCTCCAGGCCGGTCA +
Preference number: 5 (lower is better)
Translates to: GATAGRPRAWRWRPA*RGCGPARSTPPGRS
Trigger: TGACCGGCCTGGAGGTGTGGACCGAGCGGGACCGCAGCCGCGTCACGCAGGACGCCAACGCCACGCTCTGGGCCTTCCTGCAGTGGCGCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS TCA 90 bp CAGTCCCCGTGGGCGCACTGGGCCCCCGGGCGCAGCGAGCAGTTGTaGGCAAAGCAGCAGAGGTCGCGGCACTCCTGGCCAGGGCCGCAG +
Preference number: 5 (lower is better)
Translates to: QSPWAHWAPGRSEQL*AKQQRSRHSWPGPQ
Trigger: CTGCGGCCCTGGCCAGGAGTGCCGCGACCTCTGCTGCTTTGCTCACAACTGCTCGCTGCGCCCGGGGGCCCAGTGCGCCCACGGGGACTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000466620.5
ENST00000619289.4
CDS TCA 90 bp CCCCCTTGCGGAAGAAGGCGCGCAGCTGGCGGCGGCTGCAGGCGCTaGACACGCGCGGAAACGGGTGCCTACCGGCACGGGGAGGGCATT +
Preference number: 5 (lower is better)
Translates to: PPCGRRRAAGGGCRR*TRAETGAYRHGEGI
Trigger: AATGCCCTCCCCGTGCCGGTAGGCACCCGTTTCCGCGCGTGTTCAGCGCCTGCAGCCGCCGCCAGCTGCGCGCCTTCTTCCGCAAGGGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466620.5
CDS GCA 90 bp CGCAGCTGGCGGCGGCTGCAGGCGCTGAACACGCGCGGAAACGGGTaGCTACCGGCACGGGGAGGGCATTGGGCATGGAGGGACAGTCCC +
Preference number: 5 (lower is better)
Translates to: RSWRRLQALNTRGNG*LPARGGHWAWRDSP
Trigger: GGGACTGTCCCTCCATGCCCAATGCCCTCCCCGTGCCGGTAGGCACCCGTTTCCGCGCGTGTTCAGCGCCTGCAGCCGCCGCCAGCTGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466620.5
CDS-3UTR CAA 90 bp TCACTGGCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCCCGGGGTCCGGGGCATaGGAGAGGCAAGCGCCGCCC +
Preference number: 5 (lower is better)
Translates to: SLALPLQFKFLEWLSVATPGSGA*ERQAPP
Trigger: GGGCGGCGCTTGCCTCTCCAATGCCCCGGACCCCGG...GGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGCCAGTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS CCA 90 bp TCCACTGGCACCATGTGCGGTGCGAGCAGGCTGGGCTTTCCACCCTaGCACTGCAGCTTCCCACACAGGGCATCCCTCCCTGCACAGGGC +
Preference number: 5 (lower is better)
Translates to: STGTMCGASRLGFPP*HCSFPHRASLPAQG
Trigger: GCCCTGTGCAGGGAGGGATGCCCTGTGTGGGAAGCTGCAGTGCCAGGGTGGAAAGCCCAGCCTGCTCGCACCGCACATGGTGCCAGTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000466620.5
ENST00000619289.4
CDS CCA 90 bp CACTGGGTGCCTGGCTCTACCAGGCCCAGGCCAAGCAGGTCCAGCTaGGCACTGGGGAGTGCCAAGGCTCCCCGACAAGTCACTTCCTGG +
Preference number: 5 (lower is better)
Translates to: HWVPGSTRPRPSRSS*ALGSAKAPRQVTSW
Trigger: CCAGGAAGTGACTTGTCGGGGAGCCTTGGCACTCCCCAGTGCCCAGCTGGACCTGCTTGGCCTGGGCCTGGTAGAGCCAGGCACCCAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000466620.5
ENST00000619289.4
CDS CCA 90 bp GCAGCGCCTGCTCTGGCACACCATTCTAGGTCCACACTGGGTGCCTaGCTCTACCAGGCCCAGGCCAAGCAGGTCCAGCTGGGCACTGGG +
Preference number: 5 (lower is better)
Translates to: AAPALAHHSRSTLGA*LYQAQAKQVQLGTG
Trigger: CCCAGTGCCCAGCTGGACCTGCTTGGCCTGGGCCTGGTAGAGCCAGGCACCCAGTGTGGACCTAGAATGGTGTGCCAGAGCAGGCGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CAA 90 bp TGCAGAGGGGTAGGAGCGGGTGTGAGGGAGCTCTTTCCCCATCCCAGGCCCAGCCCCAGGGATATGTCCTaGAAGCACCCCGGCGCCTGG +
Preference number: 5 (lower is better)
Translates to: CRGVGAGVRELFPHPRPSPRDMS*KHPGAW
Trigger: CCAGGCGCCGGGGTGCTTCAAGGACATATCCCTGGG...GCTGGGCCTGGGATGGGGAAAGAGCTCCCTCACACCCGCTCCTACCCCTCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR CAA 90 bp AGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTCCGGGGTCCGGGGCATaGGAGAGGCAAGCGCCGCCC +
Preference number: 5 (lower is better)
Translates to: SGWVEAPLGEETSKLPAGPGSGA*ERQAPP
Trigger: GGGCGGCGCTTGCCTCTCCAATGCCCCGGACCCCGG...ACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CAA 90 bp TGGCCAGCAGTCATGCCCTCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGACCGGGGTCCGGGGCATaGGAGAGGCAAGCGCCGCCC +
Preference number: 5 (lower is better)
Translates to: WPAVMPSTELGPWKLHVGPGSGA*ERQAPP
Trigger: GGGCGGCGCTTGCCTCTCCAATGCCCCGGACCCCGG...TCCTACATGCAATTTCCACGGACCCAGCTCTGTGGAGGGCATGACTGCTGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS CCA 90 bp GCTCCAGCGTGGGACATGCGCCATCCCAGCAGTAGCCACTGCCCCTaGCACAGGGTGAGCCGTCCAGTAGGTAAACGTCTGGGGGACAGT +
Preference number: 5 (lower is better)
Translates to: APAWDMRHPSSSHCP*HRVSRPVGKRLGDS
Trigger: ACTGTCCCCCAGACGTTTACCTACTGGACGGCTCACCCTGTGCCAGGGGCAGTGGCTACTGCTGGGATGGCGCATGTCCCACGCTGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000466620.5
ENST00000619289.4
CDS CCA 90 bp CTGGCGGTGCATCCCAGAGCCCATGGAAGCATCTCACCGTGTGGTTaGGGGCCAGCACCACTGGCTGCCCATCTGGGCCGTAGTGGGTTT +
Preference number: 5 (lower is better)
Translates to: LAVHPRAHGSISPCG*GPAPLAAHLGRSGF
Trigger: AAACCCACTACGGCCCAGATGGGCAGCCAGTGGTGCTGGCCCCCAACCACACGGTGAGATGCTTCCATGGGCTCTGGGATGCACCGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR CAA 90 bp CCCTCAGGAACTTCTAATGTGGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTGCCCAGAGCGTGGCGTaGGCGTCCTGCGTGACGCGG +
Preference number: 5 (lower is better)
Translates to: PSGTSNVALGSWSGWVEAAQSVA*ASCVTR
Trigger: CCGCGTCACGCAGGACGCCAACGCCACGCTCTGGGC...AGCTTCGACCCACCCACTCCAGGAACCCAGAGCCACATTAGAAGTTCCTGAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS-3UTR CAA 90 bp TCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGAGACACACCAGACTCCCAGCCGGGGTCCGGGGCATaGGAGAGGCAAGCGCCGCCC +
Preference number: 5 (lower is better)
Translates to: STELGPWKLHVGDTPDSQPGSGA*ERQAPP
Trigger: GGGCGGCGCTTGCCTCTCCAATGCCCCGGACCCCGG...CTGGGAGTCTGGTGTGTCTCCTACATGCAATTTCCACGGACCCAGCTCTGTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS TCA 90 bp GCACAGGGCAGGAAGTGGCCCTCGCTGTCCTGGCCGCAGTTTCCATaGGCATCTCCCGCAGAGTTCACCACCTGGAAACAGGCCTCGGGA +
Preference number: 5 (lower is better)
Translates to: AQGRKWPSLSWPQFP*ASPAEFTTWKQASG
Trigger: TCCCGAGGCCTGTTTCCAGGTGGTGAACTCTGCGGGAGATGCTCATGGAAACTGCGGCCAGGACAGCGAGGGCCACTTCCTGCCCTGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000466620.5
ENST00000619289.4
CDS CCA 90 bp TATTATGTGACTCCCCACTCCGCCACCACCCAGGTCACAGAGAACTaGGTTAAGGCAGGGCCCTGGCACAGGGGCAGCCAGCACCGCAGC +
Preference number: 5 (lower is better)
Translates to: YYVTPHSATTQVTEN*VKAGPWHRGSQHRS
Trigger: GCTGCGGTGCTGGCTGCCCCTGTGCCAGGGCCCTGCCTTAACCCAGTTCTCTGTGACCTGGGTGGTGGCGGAGTGGGGAGTCACATAATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483362.1
CDS CCA 90 bp AGGTGGTGCCCTGCCCCTGTCTGTTATGCCCTCTGCCCCCATCTCTaGCCCAAATCATGCCATCTCCCTTGGCTTGCCCGGAGCACTCCC +
Preference number: 5 (lower is better)
Translates to: RWCPAPVCYALCPHL*PKSCHLPWLARSTP
Trigger: GGGAGTGCTCCGGGCAAGCCAAGGGAGATGGCATGATTTGGGCCAGAGATGGGGGCAGAGGGCATAACAGACAGGGGCAGGGCACCACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483362.1
CDS CCA 90 bp GCATCTCACCGTGTGGTTGGGGGCCAGCACCACTGGCTGCCCATCTaGGCCGTAGTGGGTTTCTATGTATCCTGGGGCCAGCAGCCTGTG +
Preference number: 5 (lower is better)
Translates to: ASHRVVGGQHHWLPI*AVVGFYVSWGQQPV
Trigger: CACAGGCTGCTGGCCCCAGGATACATAGAAACCCACTACGGCCCAGATGGGCAGCCAGTGGTGCTGGCCCCCAACCACACGGTGAGATGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR CAA 90 bp GAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGCCCAGGGATATGTCCTaGAAGCACCCCGGCGCCTGG +
Preference number: 5 (lower is better)
Translates to: EWVGRSSTRGRNFQAACRPRDMS*KHPGAW
Trigger: CCAGGCGCCGGGGTGCTTCAAGGACATATCCCTGGG...CCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CAA 90 bp TCACTGGCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCGACGGTGCGCCAGGGTaGTCCATCCAGGACCCAGTG +
Preference number: 5 (lower is better)
Translates to: SLALPLQFKFLEWLSVATDGAPG*SIQDPV
Trigger: CACTGGGTCCTGGATGGACAACCCTGGCGCACCGTC...GGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGCCAGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CAA 90 bp GTGTGGACTCAGTCGAACCATAGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGGACGGTGCGCCAGGGTaGTCCATCCAGGACCCAGTG +
Preference number: 5 (lower is better)
Translates to: VWTQSNHRAPGPLASGQQDGAPG*SIQDPV
Trigger: CACTGGGTCCTGGATGGACAACCCTGGCGCACCGTC...CTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCTATGGTTCGACTGAGTCCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CAA 90 bp GGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGACGGTGCGCCAGGGTaGTCCATCCAGGACCCAGTG +
Preference number: 5 (lower is better)
Translates to: GWVEAPLGEETSKLPAGADGAPG*SIQDPV
Trigger: CACTGGGTCCTGGATGGACAACCCTGGCGCACCGTC...AGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CAA 90 bp GAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGGGTTGAGAAGTCCTaGGAGCCCCGGGGTGGCCAG +
Preference number: 5 (lower is better)
Translates to: EWVGRSSTRGRNFQAACRWVEKS*EPRGGQ
Trigger: CTGGCCACCCCGGGGCTCCAAGGACTTCTCAACCCA...CCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CAA 90 bp CACAGAATGGGGGAGAGGCTGTCAGATTCTGAGCTCCAGAACCTCAGGTGTAGCGCCCAGAGCGTGGCGTaGGCGTCCTGCGTGACGCGG +
Preference number: 5 (lower is better)
Translates to: HRMGERLSDSELQNLRCSAQSVA*ASCVTR
Trigger: CCGCGTCACGCAGGACGCCAACGCCACGCTCTGGGC...GCTACACCTGAGGTTCTGGAGCTCAGAATCTGACAGCCTCTCCCCCATTCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS TCA 90 bp GGGAGTGCCAAGGCTCCCCGACAAGTCACTTCCTGGCCATCTAGGTaGACGGTAGAGTCCACTGGCACCATGTGCGGTGCGAGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: GSAKAPRQVTSWPSR*TVESTGTMCGASRL
Trigger: CAGCCTGCTCGCACCGCACATGGTGCCAGTGGACTCTACCGTTCACCTAGATGGCCAGGAAGTGACTTGTCGGGGAGCCTTGGCACTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000466620.5
ENST00000619289.4
CDS GCA 90 bp GTGAGCCGTCCAGTAGGTAAACGTCTGGGGGACAGTGGGAGGAGGTaGCCGTGCAAAACTCAGGGAGGTCACAGTCACCCATGGCCTGGC +
Preference number: 5 (lower is better)
Translates to: VSRPVGKRLGDSGRR*PCKTQGGHSHPWPG
Trigger: GCCAGGCCATGGGTGACTGTGACCTCCCTGAGTTTTGCACGGGCACCTCCTCCCACTGTCCCCCAGACGTTTACCTACTGGACGGCTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000466620.5
ENST00000619289.4
CDS GCA 90 bp GAAGTAACCCGCGCAAAGTCACACAACAAGCGGGACAGGGGACGATaGGGCCCCAATAGTGAGCAGCCCGGGACCCAAGGTGGAATCGCG +
Preference number: 5 (lower is better)
Translates to: EVTRAKSHNKRDRGR*GPNSEQPGTQGGIA
Trigger: CGCGATTCCACCTTGGGTCCCGGGCTGCTCACTATTGGGGCCGCATCGTCCCCTGTCCCGCTTGTTGTGTGACTTTGCGCGGGTTACTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466620.5
CDS GCA 90 bp CCACAGACCCTCAATCACAACTCGCTTTGTCAGGGTCCTCTTAGCTaGCACCCGGGGCCCAGGTGGTGCCCTGCCCCTGTCTGTTATGCC +
Preference number: 5 (lower is better)
Translates to: PQTLNHNSLCQGPLS*HPGPRWCPAPVCYA
Trigger: GGCATAACAGACAGGGGCAGGGCACCACCTGGGCCCCGGGTGGCAGCTAAGAGGACCCTGACAAAGCGAGTTGTGATTGAGGGTCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483362.1
CDS CCA 90 bp GCAATGATCCGTGTGGTTGGGGGCCAGCACCACTGGCTGCCCATCTaGGCCGTAGTGGGTTTCTATGTATCCTGGGGCCAGCAGCCTGTG +
Preference number: 5 (lower is better)
Translates to: AMIRVVGGQHHWLPI*AVVGFYVSWGQQPV
Trigger: CACAGGCTGCTGGCCCCAGGATACATAGAAACCCACTACGGCCCAGATGGGCAGCCAGTGGTGCTGGCCCCCAACCACACGGATCATTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS CCA 90 bp GGGGGTCAGGCGAGACTGCTGGCAGAGGCTTCTCAGGGTGGCTGCTaGGCTCATGAGAGTTCTCAGGGTCTGGGAGAAATGGTGGAGGGT +
Preference number: 5 (lower is better)
Translates to: GGQARLLAEASQGGC*AHESSQGLGEMVEG
Trigger: ACCCTCCACCATTTCTCCCAGACCCTGAGAACTCTCATGAGCCCAGCAGCCACCCTGAGAAGCCTCTGCCAGCAGTCTCGCCTGACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483362.1
CDS CCA 90 bp GAGCCCATGGAAGCATCTCACCGTGTGGTTGGGGGCCAGCACCACTaGCTGCCCATCTGGGCCGTAGTGGGTTTCTATGTATCCTGGGGC +
Preference number: 5 (lower is better)
Translates to: EPMEASHRVVGGQHH*LPIWAVVGFYVSWG
Trigger: GCCCCAGGATACATAGAAACCCACTACGGCCCAGATGGGCAGCCAGTGGTGCTGGCCCCCAACCACACGGTGAGATGCTTCCATGGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR CAA 90 bp CTACCCAGGAGTCGGGGAAGCCCCTTACTCGCCCTTGGTAGTGGCAATGATCCTTGGGTTGAGAAGTCCTaGGAGCCCCGGGGTGGCCAG +
Preference number: 5 (lower is better)
Translates to: LPRSRGSPLLALGSGNDPWVEKS*EPRGGQ
Trigger: CTGGCCACCCCGGGGCTCCAAGGACTTCTCAACCCA...AGGATCATTGCCACTACCAAGGGCGAGTAAGGGGCTTCCCCGACTCCTGGGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR CAA 90 bp TGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGACTGTGTGGGCCATCTTaGGGGCCACTGCACGCAGGG +
Preference number: 5 (lower is better)
Translates to: WVEAPLGEETSKLPAGAGLCGPS*GPLHAG
Trigger: CCCTGCGTGCAGTGGCCCCAAAGATGGCCCACACAG...TCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CAA 90 bp CAGCAGGACGCTGAGGAGCATGGCCAGCAGGAAGGTGTCATGGTTTTCAGCCTGCTGTGTGGGCCATCTTaGGGGCCACTGCACGCAGGG +
Preference number: 5 (lower is better)
Translates to: QQDAEEHGQQEGVMVFSLLCGPS*GPLHAG
Trigger: CCCTGCGTGCAGTGGCCCCAAAGATGGCCCACACAG...CAGGCTGAAAACCATGACACCTTCCTGCTGGCCATGCTCCTCAGCGTCCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS TCA 90 bp TTGCTATTGCAAACCCCGTGGCTGTGGCAGGCAGTCAGGCAGCGCTaGAGCTCCTGGAAGGCATTCTTCCTGCAGCGCCTGCTCTGGCAC +
Preference number: 5 (lower is better)
Translates to: LLLQTPWLWQAVRQR*SSWKAFFLQRLLWH
Trigger: GTGCCAGAGCAGGCGCTGCAGGAAGAATGCCTTCCAGGAGCTTCAGCGCTGCCTGACTGCCTGCCACAGCCACGGGGTTTGCAATAGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS TCA 90 bp TGGGTTAAGGCAGGGCCCTGGCACAGGGGCAGCCAGCACCGCAGCTaGCCAGTGGTATGGAGTGAAAAGATGTGCTGGGCCCAGCATTTG +
Preference number: 5 (lower is better)
Translates to: WVKAGPWHRGSQHRS*PVVWSEKMCWAQHL
Trigger: CAAATGCTGGGCCCAGCACATCTTTTCACTCCATACCACTGGTCAGCTGCGGTGCTGGCTGCCCCTGTGCCAGGGCCCTGCCTTAACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483362.1
CDS GCA 90 bp TCCCAAGACCAGGCTATGTCAGACATGGCCACAGAGTGCCTGCCCTaGCTAGGGCCCTGGTGCAGGGTGAGTCCTAGGACAGCCATGCTT +
Preference number: 5 (lower is better)
Translates to: SQDQAMSDMATECLP*LGPWCRVSPRTAML
Trigger: AAGCATGGCTGTCCTAGGACTCACCCTGCACCAGGGCCCTAGGCAGGGCAGGCACTCTGTGGCCATGTCTGACATAGCCTGGTCTTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483362.1
CDS GCA 90 bp GCCCCTGTCTGTTATGCCCTCTGCCCCCATCTCTGGCCCAAATCATaGCATCTCCCTTGGCTTGCCCGGAGCACTCCCAAGACCAGGCTA +
Preference number: 5 (lower is better)
Translates to: APVCYALCPHLWPKS*HLPWLARSTPKTRL
Trigger: TAGCCTGGTCTTGGGAGTGCTCCGGGCAAGCCAAGGGAGATGGCATGATTTGGGCCAGAGATGGGGGCAGAGGGCATAACAGACAGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483362.1
CDS CCA 90 bp AGGCAGGGCCCTGGCACAGGGGCAGCCAGCACCGCAGCTGACCAGTaGTATGGAGTGAAAAGATGTGCTGGGCCCAGCATTTGGGAACTT +
Preference number: 5 (lower is better)
Translates to: RQGPGTGAASTAADQ*YGVKRCAGPSIWEL
Trigger: AAGTTCCCAAATGCTGGGCCCAGCACATCTTTTCACTCCATACCACTGGTCAGCTGCGGTGCTGGCTGCCCCTGTGCCAGGGCCCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483362.1
CDS-3UTR CAA 90 bp CCCTCAGGAACTTCTAATGTGGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTGACGGTGCGCCAGGGTaGTCCATCCAGGACCCAGTG +
Preference number: 5 (lower is better)
Translates to: PSGTSNVALGSWSGWVEADGAPG*SIQDPV
Trigger: CACTGGGTCCTGGATGGACAACCCTGGCGCACCGTC...AGCTTCGACCCACCCACTCCAGGAACCCAGAGCCACATTAGAAGTTCCTGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CAA 90 bp CCTTCTGCAGCCCCAGCTGCATCGCTGCAGATGGGCTCCTGGGAGTCGGTAGCAGAAAGATCTCGTGGGTaGAGAAGTCCTTGGAGCCCC +
Preference number: 5 (lower is better)
Translates to: PSAAPAASLQMGSWESVAERSRG*RSPWSP
Trigger: GGGGCTCCAAGGACTTCTCAACCCACGAGATCTTTC...TGCTACCGACTCCCAGGAGCCCATCTGCAGCGATGCAGCTGGGGCTGCAGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR CAA 90 bp GAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGCTGGTCATGCCCGCTTaGTTCCCAGGATCCCTGTGG +
Preference number: 5 (lower is better)
Translates to: EWVGRSSTRGRNFQAACRLVMPA*FPGSLW
Trigger: CCACAGGGATCCTGGGAACAAAGCGGGCATGACCAG...CCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CAA 90 bp CCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGGCCCAGAGCGTGGCGTaGGCGTCCTGCGTGACGCGG +
Preference number: 5 (lower is better)
Translates to: PAVQVPGVAVSGHLSLNLAQSVA*ASCVTR
Trigger: CCGCGTCACGCAGGACGCCAACGCCACGCTCTGGGC...CAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS-3UTR CAA 90 bp TCACTGGCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCCCACCAAAGCCTGGCTaGTCACAGAAGGGTGGAGCC +
Preference number: 5 (lower is better)
Translates to: SLALPLQFKFLEWLSVATPPKPG*SQKGGA
Trigger: GGCTCCACCCTTCTGTGACAAGCCAGGCTTTGGTGG...GGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGCCAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CAA 90 bp TGGCCAGCAGTCATGCCCTCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGACTGTGTGGGCCATCTTaGGGGCCACTGCACGCAGGG +
Preference number: 5 (lower is better)
Translates to: WPAVMPSTELGPWKLHVGLCGPS*GPLHAG
Trigger: CCCTGCGTGCAGTGGCCCCAAAGATGGCCCACACAG...TCCTACATGCAATTTCCACGGACCCAGCTCTGTGGAGGGCATGACTGCTGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CAA 90 bp GAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGCAGGACAGAGCCCTTTaGGGATGGCCAGCACTACCC +
Preference number: 5 (lower is better)
Translates to: EWVGRSSTRGRNFQAACRQDRAL*GWPALP
Trigger: GGGTAGTGCTGGCCATCCCAAAAGGGCTCTGTCCTG...CCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CAA 90 bp AACCATAGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTCATGCCCTCCACAGCAGGACAGAGCCCTTTaGGGATGGCCAGCACTACCC +
Preference number: 5 (lower is better)
Translates to: NHRAPGPLASGQQSCPPQQDRAL*GWPALP
Trigger: GGGTAGTGCTGGCCATCCCAAAAGGGCTCTGTCCTG...CTGTGGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCTATGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CAA 90 bp GGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTCAGGACAGAGCCCTTTaGGGATGGCCAGCACTACCC +
Preference number: 5 (lower is better)
Translates to: GWVEAPLGEETSKLPAGAQDRAL*GWPALP
Trigger: GGGTAGTGCTGGCCATCCCAAAAGGGCTCTGTCCTG...AGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CAA 90 bp GGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAGGACAGAGCCCTTTaGGGATGGCCAGCACTACCC +
Preference number: 5 (lower is better)
Translates to: GSGFLEWVGRSSTRGRNFQDRAL*GWPALP
Trigger: GGGTAGTGCTGGCCATCCCAAAAGGGCTCTGTCCTG...GAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACTCCAGGAACCCAGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS TCA 90 bp CTGGCACAGGGGCAGCCAGCACCGCAGCTGACCAGTGGTATGGAGTaGAAAGATGTGCTGGGCCCAGCATTTGGGAACTTCAAGGGGGTG +
Preference number: 5 (lower is better)
Translates to: LAQGQPAPQLTSGME*KDVLGPAFGNFKGV
Trigger: CACCCCCTTGAAGTTCCCAAATGCTGGGCCCAGCACATCTTTTCACTCCATACCACTGGTCAGCTGCGGTGCTGGCTGCCCCTGTGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483362.1
CDS TCA 90 bp GCCTCCCCGCAGCATGGTGTCCAGCCCAGGGAGTTCTGCGTTTACTaGGTTTCTTGGGGCACCCATCTGCTCCAAGTCACCCTCTCAGCT +
Preference number: 5 (lower is better)
Translates to: ASPQHGVQPREFCVY*VSWGTHLLQVTLSA
Trigger: AGCTGAGAGGGTGACTTGGAGCAGATGGGTGCCCCAAGAAACTCAGTAAACGCAGAACTCCCTGGGCTGGACACCATGCTGCGGGGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483362.1
CDS GCA 90 bp AATAGTGAGCAGCCCGGGACCCAAGGTGGAATCGCGACCCGACGGTaGTCCTCCCGGTGTAGGAGTAACCTCGCCAGGTTACTCGGAAAA +
Preference number: 5 (lower is better)
Translates to: NSEQPGTQGGIATRR*SSRCRSNLARLLGK
Trigger: TTTTCCGAGTAACCTGGCGAGGTTACTCCTACACCGGGAGGAGCACCGTCGGGTCGCGATTCCACCTTGGGTCCCGGGCTGCTCACTATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466620.5
CDS GCA 90 bp ATGTCCGCCCCTTCGGCAGCTATGTCTGCTCTCCTTGCCCCTGGGTaGCCTGCTGCCCTTGATGATTCCAAGCCATCTTTGACTGTCCCC +
Preference number: 5 (lower is better)
Translates to: MSAPSAAMSALLAPG*PAALDDSKPSLTVP
Trigger: GGGGACAGTCAAAGATGGCTTGGAATCATCAAGGGCAGCAGGGCACCCAGGGGCAAGGAGAGCAGACATAGCTGCCGAAGGGGCGGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483362.1
CDS CCA 90 bp GGGAGCCTTGGGATCCAGGCTCCAAGTGAGCCTCATGCCCTCGGCTaGCACCTCCTCTCTCTAGTCCTAACATTTCCTCCAGGCTCTGAC +
Preference number: 5 (lower is better)
Translates to: GSLGIQAPSEPHALG*HLLSLVLTFPPGSD
Trigger: GTCAGAGCCTGGAGGAAATGTTAGGACTAGAGAGAGGAGGTGCCAGCCGAGGGCATGAGGCTCACTTGGAGCCTGGATCCCAAGGCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483362.1
CDS-3UTR CAA 90 bp TCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGAGACACACCAGACTCCCAGCCCAGGGATATGTCCTaGAAGCACCCCGGCGCCTGG +
Preference number: 5 (lower is better)
Translates to: STELGPWKLHVGDTPDSQPRDMS*KHPGAW
Trigger: CCAGGCGCCGGGGTGCTTCAAGGACATATCCCTGGG...CTGGGAGTCTGGTGTGTCTCCTACATGCAATTTCCACGGACCCAGCTCTGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CAA 90 bp TCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGAGACACACCAGACTCCCAGGACGGTGCGCCAGGGTaGTCCATCCAGGACCCAGTG +
Preference number: 5 (lower is better)
Translates to: STELGPWKLHVGDTPDSQDGAPG*SIQDPV
Trigger: CACTGGGTCCTGGATGGACAACCCTGGCGCACCGTC...CTGGGAGTCTGGTGTGTCTCCTACATGCAATTTCCACGGACCCAGCTCTGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CAA 90 bp GTGTGGACTCAGTCGAACCATAGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGGCCCCTTACTCGCCCTaGGTAGTGGCAATGATCCGT +
Preference number: 5 (lower is better)
Translates to: VWTQSNHRAPGPLASGQQAPYSP*VVAMIR
Trigger: ACGGATCATTGCCACTACCAAGGGCGAGTAAGGGGC...CTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCTATGGTTCGACTGAGTCCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CAA 90 bp CAGCAGGACGCTGAGGAGCATGGCCAGCAGGAAGGTGTCATGGTTTTCAGCCTGCTGGTCATGCCCGCTTaGTTCCCAGGATCCCTGTGG +
Preference number: 5 (lower is better)
Translates to: QQDAEEHGQQEGVMVFSLLVMPA*FPGSLW
Trigger: CCACAGGGATCCTGGGAACAAAGCGGGCATGACCAG...CAGGCTGAAAACCATGACACCTTCCTGCTGGCCATGCTCCTCAGCGTCCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR CAA 90 bp AGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTCATGCCCTCCACAGAGCTGGTCCAGGAGACGCTGTTaGGTGTGGTTCAAGTTTCGG +
Preference number: 5 (lower is better)
Translates to: RAPGPLASGQQSCPPQSWSRRRC*VWFKFR
Trigger: CCGAAACTTGAACCACACCAAACAGCGTCTCCTGGA...CCAGCTCTGTGGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CAA 90 bp CCTTCTGCAGCCCCAGCTGCATCGCTGCAGATGGGCTCCTGGGAGTCGGTAGCACAGTTATGGTTGCTATaGCAAACCCCGTGGCTGTGG +
Preference number: 5 (lower is better)
Translates to: PSAAPAASLQMGSWESVAQLWLL*QTPWLW
Trigger: CCACAGCCACGGGGTTTGCAATAGCAACCATAACTG...TGCTACCGACTCCCAGGAGCCCATCTGCAGCGATGCAGCTGGGGCTGCAGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR CAA 90 bp CCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTGATTCCACCAAAGCCTGGCTaGTCACAGAAGGGTGGAGCC +
Preference number: 5 (lower is better)
Translates to: PLGEETSKLPAGAGGPVIPPKPG*SQKGGA
Trigger: GGCTCCACCCTTCTGTGACAAGCCAGGCTTTGGTGG...AATCACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CAA 90 bp TGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGACTGGACTTGATCTGCTaGGGGGTCAGGCGAGACTGC +
Preference number: 5 (lower is better)
Translates to: WVEAPLGEETSKLPAGAGLDLIC*GVRRDC
Trigger: GCAGTCTCGCCTGACCCCCAAGCAGATCAAGTCCAG...TCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350009.6
ENST00000356518.7
CDS TCA 90 bp CGGCTGGCACCTCCTCTCTCTAGTCCTAACATTTCCTCCAGGCTCTaGCAGCAGCCTGGCACTCTCCAGATGCTGGCATCGCTCAGCTTC +
Preference number: 5 (lower is better)
Translates to: RLAPPLSSPNISSRL*QQPGTLQMLASLSF
Trigger: GAAGCTGAGCGATGCCAGCATCTGGAGAGTGCCAGGCTGCTGTCAGAGCCTGGAGGAAATGTTAGGACTAGAGAGAGGAGGTGCCAGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483362.1
CDS CCA 90 bp GTTATGGTTGCTATTGCAAACCATTCTAGGTCCACACTGGGTGCCTaGCTCTACCAGGCCCAGGCCAAGCAGGTCCAGCTGGGCACTGGG +
Preference number: 5 (lower is better)
Translates to: VMVAIANHSRSTLGA*LYQAQAKQVQLGTG
Trigger: CCCAGTGCCCAGCTGGACCTGCTTGGCCTGGGCCTGGTAGAGCCAGGCACCCAGTGTGGACCTAGAATGGTTTGCAATAGCAACCATAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350009.6
ENST00000466620.5
CDS CCA 90 bp CTGGCACTCTCCAGATGCTGGCATCGCTCAGCTTCCAAAGAACCTTaGATGTCCGCCCCTTCGGCAGCTATGTCTGCTCTCCTTGCCCCT +
Preference number: 5 (lower is better)
Translates to: LALSRCWHRSASKEP*MSAPSAAMSALLAP
Trigger: AGGGGCAAGGAGAGCAGACATAGCTGCCGAAGGGGCGGACATCCAAGGTTCTTTGGAAGCTGAGCGATGCCAGCATCTGGAGAGTGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483362.1
CDS-3UTR CAA 90 bp AGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCCCCTTACTCGCCCTaGGTAGTGGCAATGATCCGT +
Preference number: 5 (lower is better)
Translates to: SGWVEAPLGEETSKLPAGAPYSP*VVAMIR
Trigger: ACGGATCATTGCCACTACCAAGGGCGAGTAAGGGGC...ACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CAA 90 bp GGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGAAAGATCTCGTGGGTaGAGAAGTCCTTGGAGCCCC +
Preference number: 5 (lower is better)
Translates to: GWVEAPLGEETSKLPAGAERSRG*RSPWSP
Trigger: GGGGCTCCAAGGACTTCTCAACCCACGAGATCTTTC...AGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CAA 90 bp CCCTCAGGAACTTCTAATGTGGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTCTGGTCATGCCCGCTTaGTTCCCAGGATCCCTGTGG +
Preference number: 5 (lower is better)
Translates to: PSGTSNVALGSWSGWVEALVMPA*FPGSLW
Trigger: CCACAGGGATCCTGGGAACAAAGCGGGCATGACCAG...AGCTTCGACCCACCCACTCCAGGAACCCAGAGCCACATTAGAAGTTCCTGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CAA 90 bp GTGTGGACTCAGTCGAACCATAGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTCTTGGCATCTGGACTaGATCTGCTTGGGGGTCAGG +
Preference number: 5 (lower is better)
Translates to: VWTQSNHRAPGPLASGQQSWHLD*ICLGVR
Trigger: CCTGACCCCCAAGCAGATCAAGTCCAGATGCCAAGA...CTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCTATGGTTCGACTGAGTCCACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350009.6
ENST00000356518.7
CDS-3UTR CAA 90 bp AACCATAGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTCATGCCCTCCACAGTCTTGGCATCTGGACTaGATCTGCTTGGGGGTCAGG +
Preference number: 5 (lower is better)
Translates to: NHRAPGPLASGQQSCPPQSWHLD*ICLGVR
Trigger: CCTGACCCCCAAGCAGATCAAGTCCAGATGCCAAGA...CTGTGGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCTATGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350009.6
ENST00000356518.7
CDS-3UTR CAA 90 bp CTGGCAGAGGCTTCTCAGGGTGGCTGCTGGGCTCATGAGAGTTCTCAGGGTCCATCTTGGCATCTGGACTaGATCTTGGGGGTCAGGCGA +
Preference number: 5 (lower is better)
Translates to: LAEASQGGCWAHESSQGPSWHLD*ILGVRR
Trigger: TCGCCTGACCCCCAAGATCAAGTCCAGATGCCAAGA...TGGACCCTGAGAACTCTCATGAGCCCAGCAGCCACCCTGAGAAGCCTCTGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR CAA 90 bp AGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTTCTTGGCATCTGGACTaGATCTTGGGGGTCAGGCGA +
Preference number: 5 (lower is better)
Translates to: SSTRGRNFQAACRCWRSGSWHLD*ILGVRR
Trigger: TCGCCTGACCCCCAAGATCAAGTCCAGATGCCAAGA...ACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CAA 90 bp TCACTGGCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCGCCCCTTACTCGCCCTaGGTAGTGGCAATGATCCTA +
Preference number: 5 (lower is better)
Translates to: SLALPLQFKFLEWLSVATAPYSP*VVAMIL
Trigger: TAGGATCATTGCCACTACCAAGGGCGAGTAAGGGGC...GGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGCCAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS GCA 90 bp AGCCCAGGGAGTTCTGCGTTTACTGAGTTTCTTGGGGCACCCATCTaGTCCAAGTCACCCTCTCAGCTCCCTTCCTGCTCCCTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: SPGSSAFTEFLGAPI*SKSPSQLPSCSLFR
Trigger: CCTGAAGAGGGAGCAGGAAGGGAGCTGAGAGGGTGACTTGGAGCAGATGGGTGCCCCAAGAAACTCAGTAAACGCAGAACTCCCTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483362.1
CDS CCA 90 bp GAGCAACGTGATAAGAGTCCAGGAGGTTGGCACAGTGATCCTGAGTaGGTTATTGCCTCCCCGCAGCATGGTGTCCAGCCCAGGGAGTTC +
Preference number: 5 (lower is better)
Translates to: EQRDKSPGGWHSDPE*VIASPQHGVQPREF
Trigger: GAACTCCCTGGGCTGGACACCATGCTGCGGGGAGGCAATAACCCACTCAGGATCACTGTGCCAACCTCCTGGACTCTTATCACGTTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483362.1
CDS-3UTR CAA 90 bp CCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGCCCAGGGATATGTCCTaGAAGCACCCCGGCGCCTGG +
Preference number: 5 (lower is better)
Translates to: PAVQVPGVAVSGHLSLNLPRDMS*KHPGAW
Trigger: CCAGGCGCCGGGGTGCTTCAAGGACATATCCCTGGG...CAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CAA 90 bp GTGACCTTTGCTTCTGGGACTGATGGTTTATTGAGCTGGAGAGTGTGCCCAGCATGGGTTGAGAAGTCCTaGGAGCCCCGGGGTGGCCAG +
Preference number: 5 (lower is better)
Translates to: VTFASGTDGLLSWRVCPAWVEKS*EPRGGQ
Trigger: CTGGCCACCCCGGGGCTCCAAGGACTTCTCAACCCA...TGCTGGGCACACTCTCCAGCTCAATAAACCATCAGTCCCAGAAGCAAAGGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CAA 90 bp GCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTGAAAGATCTCGTGGGTaGAGAAGTCCTTGGAGCCCC +
Preference number: 5 (lower is better)
Translates to: ALPLQFKFLEWLSVATCLERSRG*RSPWSP
Trigger: GGGGCTCCAAGGACTTCTCAACCCACGAGATCTTTC...AAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CAA 90 bp GTGTGGACTCAGTCGAACCATAGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGCAGTTATGGTTGCTATaGCAAACCCCGTGGCTGTGG +
Preference number: 5 (lower is better)
Translates to: VWTQSNHRAPGPLASGQQQLWLL*QTPWLW
Trigger: CCACAGCCACGGGGTTTGCAATAGCAACCATAACTG...CTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCTATGGTTCGACTGAGTCCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CAA 90 bp TCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGAGACACACCAGACTCCCAGCTGGACTTGATCTGCTaGGGGGTCAGGCGAGACTGC +
Preference number: 5 (lower is better)
Translates to: STELGPWKLHVGDTPDSQLDLIC*GVRRDC
Trigger: GCAGTCTCGCCTGACCCCCAAGCAGATCAAGTCCAG...CTGGGAGTCTGGTGTGTCTCCTACATGCAATTTCCACGGACCCAGCTCTGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350009.6
ENST00000356518.7
CDS-3UTR CAA 90 bp TCACTGGCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCGGGACTGATGGTTTATaGAGCTGGAGAGTGTGCCCA +
Preference number: 5 (lower is better)
Translates to: SLALPLQFKFLEWLSVATGTDGL*SWRVCP
Trigger: TGGGCACACTCTCCAGCTCAATAAACCATCAGTCCC...GGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGCCAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CAA 90 bp CACAGAATGGGGGAGAGGCTGTCAGATTCTGAGCTCCAGAACCTCAGGTGTAGCCAGGACAGAGCCCTTTaGGGATGGCCAGCACTACCC +
Preference number: 5 (lower is better)
Translates to: HRMGERLSDSELQNLRCSQDRAL*GWPALP
Trigger: GGGTAGTGCTGGCCATCCCAAAAGGGCTCTGTCCTG...GCTACACCTGAGGTTCTGGAGCTCAGAATCTGACAGCCTCTCCCCCATTCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CAA 90 bp CCCTCAGGAACTTCTAATGTGGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTCATCTGGACTTGATCTaGGGGGTCAGGCGAGACTGC +
Preference number: 5 (lower is better)
Translates to: PSGTSNVALGSWSGWVEAHLDLI*GVRRDC
Trigger: GCAGTCTCGCCTGACCCCCAAGATCAAGTCCAGATG...AGCTTCGACCCACCCACTCCAGGAACCCAGAGCCACATTAGAAGTTCCTGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CAA 90 bp CCTTTCCAGGTGAGCAGCTGCTCCATCCGAAAGATCTCGTGGGTTGAGAAGTCCTGGAAGCTGCTGGGCTaGAGCCCTGACCACCAATCC +
Preference number: 5 (lower is better)
Translates to: PFQVSSCSIRKISWVEKSWKLLG*SPDHQS
Trigger: GGATTGGTGGTCAGGGCTCAAGCCCAGCAGCTTCCA...GGACTTCTCAACCCACGAGATCTTTCGGATGGAGCAGCTGCTCACCTGGAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS CCA 90 bp TGGGCCATCTTTGGGGCTGAGCAACGTGATAAGAGTCCAGGAGGTTaGCACAGTGATCCTGAGTGGGTTATTGCCTCCCCGCAGCATGGT +
Preference number: 5 (lower is better)
Translates to: WAIFGAEQRDKSPGG*HSDPEWVIASPQHG
Trigger: ACCATGCTGCGGGGAGGCAATAACCCACTCAGGATCACTGTGCCAACCTCCTGGACTCTTATCACGTTGCTCAGCCCCAAAGATGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483362.1
CDS CCA 90 bp GTGGCTGCTGGGCTCATGAGAGTTCTCAGGGTCTGGGAGAAATGGTaGAGGGTAAATGTTGTGAATATGGTCAGCAGGAGCCCCTGGGGC +
Preference number: 5 (lower is better)
Translates to: VAAGLMRVLRVWEKW*RVNVVNMVSRSPWG
Trigger: GCCCCAGGGGCTCCTGCTGACCATATTCACAACATTTACCCTCCACCATTTCTCCCAGACCCTGAGAACTCTCATGAGCCCAGCAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483362.1
CDS-3UTR CAA 90 bp TGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGACAGTTATGGTTGCTATaGCAAACCCCGTGGCTGTGG +
Preference number: 5 (lower is better)
Translates to: WVEAPLGEETSKLPAGAGQLWLL*QTPWLW
Trigger: CCACAGCCACGGGGTTTGCAATAGCAACCATAACTG...TCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CAA 90 bp GCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTCAGTGGCAGTTATGGTaGCTATTGCAAACCCCGTGG +
Preference number: 5 (lower is better)
Translates to: ALPLQFKFLEWLSVATCLQWQLW*LLQTPW
Trigger: CCACGGGGTTTGCAATAGCAACCATAACTGCCACTG...AAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CAA 90 bp AGTGGGTGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTCAGTGGCAGTTATGGTaGCTATTGCAAACCCCGTGG +
Preference number: 5 (lower is better)
Translates to: SGWVEAPLGEETSKLPAGQWQLW*LLQTPW
Trigger: CCACGGGGTTTGCAATAGCAACCATAACTGCCACTG...ACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCACCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CAA 90 bp CACACAGAATGGGGGAGAGGCTGTCAGATTCTGAGCTCCAGAACCTCAGGTGTACCACCAAAGCCTGGCTaGTCACAGAAGGGTGGAGCC +
Preference number: 5 (lower is better)
Translates to: HTEWGRGCQILSSRTSGVPPKPG*SQKGGA
Trigger: GGCTCCACCCTTCTGTGACAAGCCAGGCTTTGGTGG...TACACCTGAGGTTCTGGAGCTCAGAATCTGACAGCCTCTCCCCCATTCTGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CAA 90 bp GCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTGGGACTGATGGTTTATaGAGCTGGAGAGTGTGCCCA +
Preference number: 5 (lower is better)
Translates to: ALPLQFKFLEWLSVATCLGTDGL*SWRVCP
Trigger: TGGGCACACTCTCCAGCTCAATAAACCATCAGTCCC...AAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CAA 90 bp TGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGGACTGATGGTTTATaGAGCTGGAGAGTGTGCCCA +
Preference number: 5 (lower is better)
Translates to: WVEAPLGEETSKLPAGAGGTDGL*SWRVCP
Trigger: TGGGCACACTCTCCAGCTCAATAAACCATCAGTCCC...TCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CAA 90 bp TCCACAGAGCTGGGTCCGTGGAAATTGCATGTAGGAGACACACCAGACTCCCAGCATCTGGACTTGATCTaGGGGGTCAGGCGAGACTGC +
Preference number: 5 (lower is better)
Translates to: STELGPWKLHVGDTPDSQHLDLI*GVRRDC
Trigger: GCAGTCTCGCCTGACCCCCAAGATCAAGTCCAGATG...CTGGGAGTCTGGTGTGTCTCCTACATGCAATTTCCACGGACCCAGCTCTGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CAA 90 bp CCCTCAGGAACTTCTAATGTGGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTTCTTGGCATCTGGACTaGATCTTGGGGGTCAGGCGA +
Preference number: 5 (lower is better)
Translates to: PSGTSNVALGSWSGWVEASWHLD*ILGVRR
Trigger: TCGCCTGACCCCCAAGATCAAGTCCAGATGCCAAGA...AGCTTCGACCCACCCACTCCAGGAACCCAGAGCCACATTAGAAGTTCCTGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CAA 90 bp TCACTGGCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCCCCGTCTCTTCTGATTaGGAGGGCTATAGATACAGC +
Preference number: 5 (lower is better)
Translates to: SLALPLQFKFLEWLSVATPVSSD*EGYRYS
Trigger: GCTGTATCTATAGCCCTCCAAATCAGAAGAGACGGG...GGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGCCAGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS CCA 90 bp AGGGTGGCTGCTGGGCTCATGAGAGTTCTCAGGGTCTGGGAGAAATaGTGGAGGGTAAATGTTGTGAATATGGTCAGCAGGAGCCCCTGG +
Preference number: 5 (lower is better)
Translates to: RVAAGLMRVLRVWEK*WRVNVVNMVSRSPW
Trigger: CCAGGGGCTCCTGCTGACCATATTCACAACATTTACCCTCCACCATTTCTCCCAGACCCTGAGAACTCTCATGAGCCCAGCAGCCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483362.1
CDS-3UTR CAA 90 bp CACAGAATGGGGGAGAGGCTGTCAGATTCTGAGCTCCAGAACCTCAGGTGTAGCGAAAGATCTCGTGGGTaGAGAAGTCCTTGGAGCCCC +
Preference number: 5 (lower is better)
Translates to: HRMGERLSDSELQNLRCSERSRG*RSPWSP
Trigger: GGGGCTCCAAGGACTTCTCAACCCACGAGATCTTTC...GCTACACCTGAGGTTCTGGAGCTCAGAATCTGACAGCCTCTCCCCCATTCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CAA 90 bp CCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTCTGGTCATGCCCGCTTaGTTCCCAGGATCCCTGTGG +
Preference number: 5 (lower is better)
Translates to: PCSSSSWSGCQWPPVFKSLVMPA*FPGSLW
Trigger: CCACAGGGATCCTGGGAACAAAGCGGGCATGACCAG...AGATTTAAAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CAA 90 bp CCCTCAGGAACTTCTAATGTGGCTCTGGGTTCCTGGAGTGGGTGGGTCGAAGCTCAGTTATGGTTGCTATaGCAAACCCCGTGGCTGTGG +
Preference number: 5 (lower is better)
Translates to: PSGTSNVALGSWSGWVEAQLWLL*QTPWLW
Trigger: CCACAGCCACGGGGTTTGCAATAGCAACCATAACTG...AGCTTCGACCCACCCACTCCAGGAACCCAGAGCCACATTAGAAGTTCCTGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CAA 90 bp AACCATAGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTCATGCCCTCCACAGCAAAATTATGTTTGTTaGCAGAGGCCAGCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: NHRAPGPLASGQQSCPPQQNYVC*QRPARL
Trigger: GAGCCTGGCTGGCCTCTGCAAACAAACATAATTTTG...CTGTGGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCTATGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CAA 90 bp GTGTGGACTCAGTCGAACCATAGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGCAAAATTATGTTTGTTaGCAGAGGCCAGCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: VWTQSNHRAPGPLASGQQQNYVC*QRPARL
Trigger: GAGCCTGGCTGGCCTCTGCAAACAAACATAATTTTG...CTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCTATGGTTCGACTGAGTCCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CAA 90 bp AGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGAGGTCCGGTTCCCCAAAATTATGTTaGTTTGCAGAGGCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: SSTRGRNFQAACRCWRSGSPKLC*FAEASQ
Trigger: CTGGCTGGCCTCTGCAAACAAACATAATTTTGGGGA...ACCGGACCTCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CAA 90 bp TGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCCCAGGGATATGTCCTaGAAGCACCCCGGCGCCTGG +
Preference number: 5 (lower is better)
Translates to: WSGCQWPPVFKSVHFRSYPRDMS*KHPGAW
Trigger: CCAGGCGCCGGGGTGCTTCAAGGACATATCCCTGGG...GTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CAA 90 bp TGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACTGGGTTGAGAAGTCCTaGGAGCCCCGGGGTGGCCAG +
Preference number: 5 (lower is better)
Translates to: WSGCQWPPVFKSVHFRSYWVEKS*EPRGGQ
Trigger: CTGGCCACCCCGGGGCTCCAAGGACTTCTCAACCCA...GTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CAA 90 bp CACAGAATGGGGGAGAGGCTGTCAGATTCTGAGCTCCAGAACCTCAGGTGTAGCTCCAGGAGACGCTGTTaGGTGTGGTTCAAGTTTCGG +
Preference number: 5 (lower is better)
Translates to: HRMGERLSDSELQNLRCSSRRRC*VWFKFR
Trigger: CCGAAACTTGAACCACACCAAACAGCGTCTCCTGGA...GCTACACCTGAGGTTCTGGAGCTCAGAATCTGACAGCCTCTCCCCCATTCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CAA 90 bp GCTCTGCCCCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTCAAAATTATGTTTGTTaGCAGAGGCCAGCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: ALPLQFKFLEWLSVATCLQNYVC*QRPARL
Trigger: GAGCCTGGCTGGCCTCTGCAAACAAACATAATTTTG...AAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGGGGCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CAA 90 bp TGGGTCGAAGCTCCACTCGGGGAAGAAACTTCCAAGCTGCCTGCAGGTGCTGGATCCCCAAAATTATGTTaGTTTGCAGAGGCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: WVEAPLGEETSKLPAGAGSPKLC*FAEASQ
Trigger: CTGGCTGGCCTCTGCAAACAAACATAATTTTGGGGA...TCCAGCACCTGCAGGCAGCTTGGAAGTTTCTTCCCCGAGTGGAGCTTCGACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CAA 90 bp TGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCATCTCACCGTGTGGTaGGGGGCCAGCACCACTGGC +
Preference number: 5 (lower is better)
Translates to: WSGCQWPPVFKSVHFRSYHLTVW*GASTTG
Trigger: GCCAGTGGTGCTGGCCCCCAACCACACGGTGAGATG...GTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS-3UTR CAA 90 bp GTGACCTTTGCTTCTGGGACTGATGGTTTATTGAGCTGGAGAGTGTGCCCAGCAGAAAGATCTCGTGGGTaGAGAAGTCCTTGGAGCCCC +
Preference number: 5 (lower is better)
Translates to: VTFASGTDGLLSWRVCPAERSRG*RSPWSP
Trigger: GGGGCTCCAAGGACTTCTCAACCCACGAGATCTTTC...TGCTGGGCACACTCTCCAGCTCAATAAACCATCAGTCCCAGAAGCAAAGGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CAA 90 bp AACCATAGGGCCCCAGGACCACTAGCTTCTGGCCAGCAGTCATGCCCTCCACAGCAGTGGCAGTTATGGTaGCTATTGCAAACCATTCTA +
Preference number: 5 (lower is better)
Translates to: NHRAPGPLASGQQSCPPQQWQLW*LLQTIL
Trigger: TAGAATGGTTTGCAATAGCAACCATAACTGCCACTG...CTGTGGAGGGCATGACTGCTGGCCAGAAGCTAGTGGTCCTGGGGCCCTATGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350009.6
CDS-3UTR CAA 90 bp TTCCCGTCTCTTCTGATTTGGAGGGCTATAGATACAGCATTCCCACTCCCATCCCATCTGGACTTGATCTaGGGGGTCAGGCGAGACTGC +
Preference number: 5 (lower is better)
Translates to: FPSLLIWRAIDTAFPLPSHLDLI*GVRRDC
Trigger: GCAGTCTCGCCTGACCCCCAAGATCAAGTCCAGATG...GGATGGGAGTGGGAATGCTGTATCTATAGCCCTCCAAATCAGAAGAGACGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS CCA 90 bp GCTGACCAGTGGTATGGAGTGAAAAGATGTGCTGGGCCCAGCATTTaGGAACTTCAAGGGGGTGACAGAGGTGATTTGTGCAGAGGAAGT +
Preference number: 5 (lower is better)
Translates to: ADQWYGVKRCAGPSI*ELQGGDRGDLCRGS
Trigger: ACTTCCTCTGCACAAATCACCTCTGTCACCCCCTTGAAGTTCCCAAATGCTGGGCCCAGCACATCTTTTCACTCCATACCACTGGTCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483362.1
CDS-3UTR CAA 90 bp GTGACCTTTGCTTCTGGGACTGATGGTTTATTGAGCTGGAGAGTGTGCCCAGCATCCAGGAGACGCTGTTaGGTGTGGTTCAAGTTTCGG +
Preference number: 5 (lower is better)
Translates to: VTFASGTDGLLSWRVCPASRRRC*VWFKFR
Trigger: CCGAAACTTGAACCACACCAAACAGCGTCTCCTGGA...TGCTGGGCACACTCTCCAGCTCAATAAACCATCAGTCCCAGAAGCAAAGGTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CAA 90 bp CCTGCAGTTCAAGTTCCTGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGCAGTGGCAGTTATGGTaGCTATTGCAAACCCCGTGG +
Preference number: 5 (lower is better)
Translates to: PAVQVPGVAVSGHLSLNLQWQLW*LLQTPW
Trigger: CCACGGGGTTTGCAATAGCAACCATAACTGCCACTG...CAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCAGGAACTTGAACTGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CAA 90 bp AGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCTCCCACCAAAGCCTGGCTaGTCACAGAAGGGTGGAGCC +
Preference number: 5 (lower is better)
Translates to: SGCQWPPVFKSVHFRSYLPPKPG*SQKGGA
Trigger: GGCTCCACCCTTCTGTGACAAGCCAGGCTTTGGTGG...GAGGTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CAA 90 bp TGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCCACCAAAGCCTGGCTaGTCACAGAAGGGTGGAGCC +
Preference number: 5 (lower is better)
Translates to: WSGCQWPPVFKSVHFRSYPPKPG*SQKGGA
Trigger: GGCTCCACCCTTCTGTGACAAGCCAGGCTTTGGTGG...GTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CAA 90 bp AGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCTCGCCCCTTACTCGCCCTaGGTAGTGGCAATGATCCGT +
Preference number: 5 (lower is better)
Translates to: SGCQWPPVFKSVHFRSYLAPYSP*VVAMIR
Trigger: ACGGATCATTGCCACTACCAAGGGCGAGTAAGGGGC...GAGGTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CAA 90 bp CACACAGAATGGGGGAGAGGCTGTCAGATTCTGAGCTCCAGAACCTCAGGTGTATCCCCAAAATTATGTTaGTTTGCAGAGGCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: HTEWGRGCQILSSRTSGVSPKLC*FAEASQ
Trigger: CTGGCTGGCCTCTGCAAACAAACATAATTTTGGGGA...TACACCTGAGGTTCTGGAGCTCAGAATCTGACAGCCTCTCCCCCATTCTGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CAA 90 bp TGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACTCCAGGAGACGCTGTTaGGTGTGGTTCAAGTTTCGG +
Preference number: 5 (lower is better)
Translates to: WSGCQWPPVFKSVHFRSYSRRRC*VWFKFR
Trigger: CCGAAACTTGAACCACACCAAACAGCGTCTCCTGGA...GTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CAA 90 bp TGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCAGTGGCAGTTATGGTaGCTATTGCAAACCCCGTGG +
Preference number: 5 (lower is better)
Translates to: WSGCQWPPVFKSVHFRSYQWQLW*LLQTPW
Trigger: CCACGGGGTTTGCAATAGCAACCATAACTGCCACTG...GTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CAA 90 bp TGGAGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACGGGACTGATGGTTTATaGAGCTGGAGAGTGTGCCCA +
Preference number: 5 (lower is better)
Translates to: WSGCQWPPVFKSVHFRSYGTDGL*SWRVCP
Trigger: TGGGCACACTCTCCAGCTCAATAAACCATCAGTCCC...GTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS-3UTR CAA 90 bp AGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCTCCAAAATTATGTTTGTTaGCAGAGGCCAGCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: SGCQWPPVFKSVHFRSYLQNYVC*QRPARL
Trigger: GAGCCTGGCTGGCCTCTGCAAACAAACATAATTTTG...GAGGTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS-3UTR CAA 90 bp AGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCTCTCCCCAAAATTATGTTaGTTTGCAGAGGCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: SGCQWPPVFKSVHFRSYLSPKLC*FAEASQ
Trigger: CTGGCTGGCCTCTGCAAACAAACATAATTTTGGGGA...GAGGTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS TCA 90 bp TCCACTTTGCCTGAGCTTCTTCCCTTTAAGCCTCATAAACCACCCTaGAGCGGACACTATGATCATTATCCCCATTTTACAGAAGAGGAA +
Preference number: 5 (lower is better)
Translates to: STLPELLPFKPHKPP*SGHYDHYPHFTEEE
Trigger: TTCCTCTTCTGTAAAATGGGGATAATGATCATAGTGTCCGCTTCAGGGTGGTTTATGAGGCTTAAAGGGAAGAAGCTCAGGCAAAGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466620.5
CDS-3UTR CAA 90 bp AGTGGCTGTCAGTGGCCACCTGTCTTTAAATCTGTTCATTTTAGGAGCTACCTCCAGTTATGGTTGCTATaGCAAACCATTCTAGGTCCA +
Preference number: 5 (lower is better)
Translates to: SGCQWPPVFKSVHFRSYLQLWLL*QTILGP
Trigger: TGGACCTAGAATGGTTTGCAATAGCAACCATAACTG...GAGGTAGCTCCTAAAATGAACAGATTTAAAGACAGGTGGCCACTGACAGCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350009.6
CDS CAA 90 bp GCCCACAGCCCCCGGCGCCACTGCAGGAAGGCCCAGAGCGTGGCGTaGGCGTCCTGCGTGACGCGGCTGCGGTCCCGCTCGGTCCACACC +
Preference number: 6 (lower is better)
Translates to: AHSPRRHCRKAQSVA*ASCVTRLRSRSVHT
Trigger: GGTGTGGACCGAGCGGGACCGCAGCCGCGTCACGCAGGACGCCAACGCCACGCTCTGGGCCTTCCTGCAGTGGCGCCGGGGGCTGTGGGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS GCA 72 bp TCCGCCCAGGCTGGATTGCGGCCGACCCGTGCCCGGTaGAGCCTCAGGCCGCCGCCTTCGGACCTTCCCGCC +
Preference number: 6 (lower is better)
Translates to: SAQAGLRPTRAR*SLRPPPSDLPA
Trigger: GGCGGGAAGGTCCGAAGGCGGCGGCCTGAGGCTGCACCGGGCACGGGTCGGCCGCAATCCAGCCTGGGCGGA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000379861.8
ENST00000619289.4
CDS GCA 72 bp CAGCGGCTCGCAACTCCGGCTCCGCCCAGGCTGGATTaGGGCCGACCCGTGCCCGGTGCAGCCTCAGGCCGC +
Preference number: 6 (lower is better)
Translates to: QRLATPAPPRLD*GRPVPGAASGR
Trigger: GCGGCCTGAGGCTGCACCGGGCACGGGTCGGCCGCAATCCAGCCTGGGCGGAGCCGGAGTTGCGAGCCGCTG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000379861.8
ENST00000619289.4
CDS CCA 72 bp GCCGGCTTCAGCAGGCAGCGCACGCAGCAGTCCCCGTaGGCGCACTGGGCCCCCGGGCGCAGCGAGCAGTTG +
Preference number: 6 (lower is better)
Translates to: AGFSRQRTQQSP*AHWAPGRSEQL
Trigger: CAACTGCTCGCTGCGCCCGGGGGCCCAGTGCGCCCACGGGGACTGCTGCGTGCGCTGCCTGCTGAAGCCGGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000466620.5
ENST00000619289.4
CDS CAA 72 bp GCAGCGGCTCGCAACTCCGGCTCCGCCCAGGCTGGATaGCGGCCGACCCGTGCCCGGTGCAGCCTCAGGCCG +
Preference number: 6 (lower is better)
Translates to: AAARNSGSAQAG*RPTRARCSLRP
Trigger: CGGCCTGAGGCTGCACCGGGCACGGGTCGGCCGCAATCCAGCCTGGGCGGAGCCGGAGTTGCGAGCCGCTGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000379861.8
ENST00000619289.4
CDS TCA 72 bp GGAAGAAGGCGCGCAGCTGGCGGCGGCTGCAGGCGCTaGACACGCGCGGAAACGGGTGCCCGGTGGCCGCAG +
Preference number: 6 (lower is better)
Translates to: GRRRAAGGGCRR*TRAETGARWPQ
Trigger: CTGCGGCCACCGGGCACCCGTTTCCGCGCGTGTTCAGCGCCTGCAGCCGCCGCCAGCTGCGCGCCTTCTTCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS TCA 72 bp GGAAGAAGGCGCGCAGCTGGCGGCGGCTGCAGGCGCTaGACACGCGCGGAAACGGGTGCCTACCGGCACGGG +
Preference number: 6 (lower is better)
Translates to: GRRRAAGGGCRR*TRAETGAYRHG
Trigger: CCCGTGCCGGTAGGCACCCGTTTCCGCGCGTGTTCAGCGCCTGCAGCCGCCGCCAGCTGCGCGCCTTCTTCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466620.5
CDS CCA 72 bp CTAGGCAGCGGCTCGCAACTCCGGCTCCGCCCAGGCTaGATTGCGGCCGACCCGTGCCCGGTGCAGCCTCAG +
Preference number: 6 (lower is better)
Translates to: LGSGSQLRLRPG*IAADPCPVQPQ
Trigger: CTGAGGCTGCACCGGGCACGGGTCGGCCGCAATCCAGCCTGGGCGGAGCCGGAGTTGCGAGCCGCTGCCTAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000379861.8
ENST00000619289.4
CDS TCA 72 bp GCAGGAAGGCCCAGAGCGTGGCGTTGGCGTCCTGCGTaGCGCGGCTGCGGTCCCGCTCGGTCCACACCTCCA +
Preference number: 6 (lower is better)
Translates to: AGRPRAWRWRPA*RGCGPARSTPP
Trigger: TGGAGGTGTGGACCGAGCGGGACCGCAGCCGCGTCACGCAGGACGCCAACGCCACGCTCTGGGCCTTCCTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
CDS GCA 72 bp CGGCGGCTGCAGGCGCTGAACACGCGCGGAAACGGGTaGCTACCGGCACGGGGAGGGCATTGGGCATGGAGG +
Preference number: 6 (lower is better)
Translates to: RRLQALNTRGNG*LPARGGHWAWR
Trigger: CCTCCATGCCCAATGCCCTCCCCGTGCCGGTAGGCACCCGTTTCCGCGCGTGTTCAGCGCCTGCAGCCGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466620.5
CDS TCA 72 bp TGGGCGCACTGGGCCCCCGGGCGCAGCGAGCAGTTGTaGGCAAAGCAGCAGAGGTCGCGGCACTCCTGGCCA +
Preference number: 6 (lower is better)
Translates to: WAHWAPGRSEQL*AKQQRSRHSWP
Trigger: TGGCCAGGAGTGCCGCGACCTCTGCTGCTTTGCTCACAACTGCTCGCTGCGCCCGGGGGCCCAGTGCGCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000466620.5
ENST00000619289.4
CDS CAA 72 bp CGAGACCGGCTCCTCCAGGCTGACGGTGCGCCAGGGTaGTCCATCCAGGACCCAGTGCGGGGTGACTGGCTG +
Preference number: 6 (lower is better)
Translates to: RDRLLQADGAPG*SIQDPVRGDWL
Trigger: CAGCCAGTCACCCCGCACTGGGTCCTGGATGGACAACCCTGGCGCACCGTCAGCCTGGAGGAGCCGGTCTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS CAA 90 bp GTCTGGCTTCGAGACCGGCTCCTCCAGGCTGACGGTGCGCCAGGGTaGTCCATCCAGGACCCAGTGCGGGGTGACTGGCTGCCCAGGGAT +
Preference number: 6 (lower is better)
Translates to: VWLRDRLLQADGAPG*SIQDPVRGDWLPRD
Trigger: ATCCCTGGGCAGCCAGTCACCCCGCACTGGGTCCTGGATGGACAACCCTGGCGCACCGTCAGCCTGGAGGAGCCGGTCTCGAAGCCAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS TCA 72 bp GCCCCATGTCTGGCTTCGAGACCGGCTCCTCCAGGCTaGCGGTGCGCCAGGGTTGTCCATCCAGGACCCAGT +
Preference number: 6 (lower is better)
Translates to: APCLASRPAPPG*RCARVVHPGPS
Trigger: ACTGGGTCCTGGATGGACAACCCTGGCGCACCGTCAGCCTGGAGGAGCCGGTCTCGAAGCCAGACATGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS CCA 72 bp ACTCCCCACTCCGCCACCACCCAGGTCACAGAGAACTaGGTTAAGGCAGGGCCCTGGCACAGGGGCAGCCAG +
Preference number: 6 (lower is better)
Translates to: TPHSATTQVTEN*VKAGPWHRGSQ
Trigger: CTGGCTGCCCCTGTGCCAGGGCCCTGCCTTAACCCAGTTCTCTGTGACCTGGGTGGTGGCGGAGTGGGGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483362.1
CDS GCA 72 bp CAGCCCGGGACCCAAGGTGGAATCGCGACCCGACGGTaGTCCTCCCGGTGTAGGAGTAACCTCGCCAGGTTA +
Preference number: 6 (lower is better)
Translates to: QPGTQGGIATRR*SSRCRSNLARL
Trigger: TAACCTGGCGAGGTTACTCCTACACCGGGAGGAGCACCGTCGGGTCGCGATTCCACCTTGGGTCCCGGGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466620.5
CDS CCA 72 bp CCAGGGTTGTCCATCCAGGACCCAGTGCGGGGTGACTaGCTGCCCAGGGATATGTCCTTGAAGCACCCCGGC +
Preference number: 6 (lower is better)
Translates to: PGLSIQDPVRGD*LPRDMSLKHPG
Trigger: GCCGGGGTGCTTCAAGGACATATCCCTGGGCAGCCAGTCACCCCGCACTGGGTCCTGGATGGACAACCCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS CCA 72 bp CAGCGCCTGCTCTGGCACACCATTCTAGGTCCACACTaGGTGCCTGGCTCTACCAGGCCCAGGCCAAGCAGG +
Preference number: 6 (lower is better)
Translates to: QRLLWHTILGPH*VPGSTRPRPSR
Trigger: CCTGCTTGGCCTGGGCCTGGTAGAGCCAGGCACCCAGTGTGGACCTAGAATGGTGTGCCAGAGCAGGCGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS TCA 72 bp TGCGCCAGGGTTGTCCATCCAGGACCCAGTGCGGGGTaGCTGGCTGCCCAGGGATATGTCCTTGAAGCACCC +
Preference number: 6 (lower is better)
Translates to: CARVVHPGPSAG*LAAQGYVLEAP
Trigger: GGGTGCTTCAAGGACATATCCCTGGGCAGCCAGTCACCCCGCACTGGGTCCTGGATGGACAACCCTGGCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS TCA 72 bp CAAACCCCGTGGCTGTGGCAGGCAGTCAGGCAGCGCTaGAGCTCCTGGAAGGCATTCTTCCTGCAGCGCCTG +
Preference number: 6 (lower is better)
Translates to: QTPWLWQAVRQR*SSWKAFFLQRL
Trigger: CAGGCGCTGCAGGAAGAATGCCTTCCAGGAGCTTCAGCGCTGCCTGACTGCCTGCCACAGCCACGGGGTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS GCA 72 bp CTGCCACAATGTACAGTTCCAGGTACTTCCGGGTCCTaGGCGCTTCTCGCCTGCCCCTGCTCTGGGGACCAC +
Preference number: 6 (lower is better)
Translates to: LPQCTVPGTSGS*ALLACPCSGDH
Trigger: GTGGTCCCCAGAGCAGGGGCAGGCGAGAAGCGCGCAGGACCCGGAAGTACCTGGAACTGTACATTGTGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS GCA 72 bp CGCGCAAAGTCACACAACAAGCGGGACAGGGGACGATaGGGCCCCAATAGTGAGCAGCCCGGGACCCAAGGT +
Preference number: 6 (lower is better)
Translates to: RAKSHNKRDRGR*GPNSEQPGTQG
Trigger: ACCTTGGGTCCCGGGCTGCTCACTATTGGGGCCGCATCGTCCCCTGTCCCGCTTGTTGTGTGACTTTGCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466620.5
CDS CCA 72 bp CGTGTGGTTGGGGGCCAGCACCACTGGCTGCCCATCTaGGCCGTAGTGGGTTTCTATGTATCCTGGGGCCAG +
Preference number: 6 (lower is better)
Translates to: RVVGGQHHWLPI*AVVGFYVSWGQ
Trigger: CTGGCCCCAGGATACATAGAAACCCACTACGGCCCAGATGGGCAGCCAGTGGTGCTGGCCCCCAACCACACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS CCA 72 bp TGGGACATGCGCCATCCCAGCAGTAGCCACTGCCCCTaGCACAGGGTGAGCCGTCCAGTAGGTAAACGTCTG +
Preference number: 6 (lower is better)
Translates to: WDMRHPSSSHCP*HRVSRPVGKRL
Trigger: CAGACGTTTACCTACTGGACGGCTCACCCTGTGCCAGGGGCAGTGGCTACTGCTGGGATGGCGCATGTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000466620.5
ENST00000619289.4
CDS CCA 72 bp CTGGACTTGATCTGCTTGGGGGTCAGGCGAGACTGCTaGCAGAGGCTTCTCAGGGTGGCTGCTGGGCTCATG +
Preference number: 6 (lower is better)
Translates to: LDLICLGVRRDC*QRLLRVAAGLM
Trigger: CATGAGCCCAGCAGCCACCCTGAGAAGCCTCTGCCAGCAGTCTCGCCTGACCCCCAAGCAGATCAAGTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000466620.5
ENST00000483362.1
CDS CAA 72 bp ACGCCGCCCAGGGGGTGGTCCCTGTGTGGGCCATCTTaGGGGCTGAGCAACGTGATAAGAGTCCAGGAGGTT +
Preference number: 6 (lower is better)
Translates to: TPPRGWSLCGPS*GLSNVIRVQEV
Trigger: AACCTCCTGGACTCTTATCACGTTGCTCAGCCCCAAAGATGGCCCACACAGGGACCACCCCCTGGGCGGCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483362.1
CDS TCA 72 bp GCTGGCAGAGGCTTCTCAGGGTGGCTGCTGGGCTCATaGGAGTTCTCAGGGTCTGGGAGAAATGGTGGAGGG +
Preference number: 6 (lower is better)
Translates to: AGRGFSGWLLGS*EFSGSGRNGGG
Trigger: CCCTCCACCATTTCTCCCAGACCCTGAGAACTCTCATGAGCCCAGCAGCCACCCTGAGAAGCCTCTGCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483362.1
CDS GCA 72 bp CAGGCGAGACTGCTGGCAGAGGCTTCTCAGGGTGGCTaGTGGGCTCATGAGAGTTCTCAGGGTCTGGGAGAA +
Preference number: 6 (lower is better)
Translates to: QARLLAEASQGG*WAHESSQGLGE
Trigger: TTCTCCCAGACCCTGAGAACTCTCATGAGCCCAGCAGCCACCCTGAGAAGCCTCTGCCAGCAGTCTCGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483362.1
CDS CCA 72 bp CCTGGCACAGGGGCAGCCAGCACCGCAGCTGACCAGTaGTATGGAGTGAAAAGATGTGCTGGGCCCAGCATT +
Preference number: 6 (lower is better)
Translates to: PGTGAASTAADQ*YGVKRCAGPSI
Trigger: AATGCTGGGCCCAGCACATCTTTTCACTCCATACCACTGGTCAGCTGCGGTGCTGGCTGCCCCTGTGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483362.1
CDS CAA 72 bp GTCCAGGAGGTTGGCACAGTGATCCTGAGTGGGTTATaGCCTCCCCGCAGCATGGTGTCCAGCCCAGGGAGT +
Preference number: 6 (lower is better)
Translates to: VQEVGTVILSGL*PPRSMVSSPGS
Trigger: ACTCCCTGGGCTGGACACCATGCTGCGGGGAGGCAATAACCCACTCAGGATCACTGTGCCAACCTCCTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483362.1
CDS CAA 90 bp CCTGGCACTCTCCAGATGCTGGCATCGCTCAGCTTCCAAAGAACCTaGGATGTCCGCCCCTTCGGCAGCTATGTCTGCTCTCCTTGCCCC +
Preference number: 6 (lower is better)
Translates to: PGTLQMLASLSFQRT*DVRPFGSYVCSPCP
Trigger: GGGGCAAGGAGAGCAGACATAGCTGCCGAAGGGGCGGACATCCAAGGTTCTTTGGAAGCTGAGCGATGCCAGCATCTGGAGAGTGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483362.1
CDS TCA 72 bp AAGGCTCCCCGACAAGTCACTTCCTGGCCATCTAGGTaGACGGTAGAGTCCACTGGCACCATGTGCGGTGCG +
Preference number: 6 (lower is better)
Translates to: KAPRQVTSWPSR*TVESTGTMCGA
Trigger: CGCACCGCACATGGTGCCAGTGGACTCTACCGTTCACCTAGATGGCCAGGAAGTGACTTGTCGGGGAGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000466620.5
ENST00000619289.4
CDS CCA 72 bp GTGGCAATGATCCGTGTGGTTGGGGGCCAGCACCACTaGCTGCCCATCTGGGCCGTAGTGGGTTTCTATGTA +
Preference number: 6 (lower is better)
Translates to: VAMIRVVGGQHH*LPIWAVVGFYV
Trigger: TACATAGAAACCCACTACGGCCCAGATGGGCAGCCAGTGGTGCTGGCCCCCAACCACACGGATCATTGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS CCA 72 bp GCGAGACTGCTGGCAGAGGCTTCTCAGGGTGGCTGCTaGGCTCATGAGAGTTCTCAGGGTCTGGGAGAAATG +
Preference number: 6 (lower is better)
Translates to: ARLLAEASQGGC*AHESSQGLGEM
Trigger: CATTTCTCCCAGACCCTGAGAACTCTCATGAGCCCAGCAGCCACCCTGAGAAGCCTCTGCCAGCAGTCTCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483362.1
CDS CCA 72 bp GAAGCATCTCACCGTGTGGTTGGGGGCCAGCACCACTaGCTGCCCATCTGGGCCGTAGTGGGTTTCTATGTA +
Preference number: 6 (lower is better)
Translates to: EASHRVVGGQHH*LPIWAVVGFYV
Trigger: TACATAGAAACCCACTACGGCCCAGATGGGCAGCCAGTGGTGCTGGCCCCCAACCACACGGTGAGATGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617732.1
CDS CAA 90 bp AAGAACCTTGGATGTCCGCCCCTTCGGCAGCTATGTCTGCTCTCCTaGCCCCTGGGTGCCCTGCTGCCCTTGATGATTCCAAGCCATCTT +
Preference number: 6 (lower is better)
Translates to: KNLGCPPLRQLCLLS*PLGALLPLMIPSHL
Trigger: AAGATGGCTTGGAATCATCAAGGGCAGCAGGGCACCCAGGGGCAAGGAGAGCAGACATAGCTGCCGAAGGGGCGGACATCCAAGGTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483362.1
CDS CAA 90 bp GCAGCATGGTGTCCAGCCCAGGGAGTTCTGCGTTTACTGAGTTTCTaGGGGCACCCATCTGCTCCAAGTCACCCTCTCAGCTCCCTTCCT +
Preference number: 6 (lower is better)
Translates to: AAWCPAQGVLRLLSF*GHPSAPSHPLSSLP
Trigger: AGGAAGGGAGCTGAGAGGGTGACTTGGAGCAGATGGGTGCCCCAAGAAACTCAGTAAACGCAGAACTCCCTGGGCTGGACACCATGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483362.1
CDS GCA 72 bp CCTTCGGCAGCTATGTCTGCTCTCCTTGCCCCTGGGTaGCCTGCTGCCCTTGATGATTCCAAGCCATCTTTG +
Preference number: 6 (lower is better)
Translates to: PSAAMSALLAPG*PAALDDSKPSL
Trigger: CAAAGATGGCTTGGAATCATCAAGGGCAGCAGGGCACCCAGGGGCAAGGAGAGCAGACATAGCTGCCGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483362.1
CDS CCA 72 bp CTGCCCATCTGGGCCGTAGTGGGTTTCTATGTATCCTaGGGCCAGCAGCCTGTGGTTCTTCTCCAGCTCAAG +
Preference number: 6 (lower is better)
Translates to: LPIWAVVGFYVS*GQQPVVLLQLK
Trigger: CTTGAGCTGGAGAAGAACCACAGGCTGCTGGCCCCAGGATACATAGAAACCCACTACGGCCCAGATGGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000617732.1
ENST00000619289.4
CDS CCA 72 bp CCAGGCTCTGACAGCAGCCTGGCACTCTCCAGATGCTaGCATCGCTCAGCTTCCAAAGAACCTTGGATGTCC +
Preference number: 6 (lower is better)
Translates to: PGSDSSLALSRC*HRSASKEPWMS
Trigger: GGACATCCAAGGTTCTTTGGAAGCTGAGCGATGCCAGCATCTGGAGAGTGCCAGGCTGCTGTCAGAGCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483362.1
CDS CCA 72 bp GGGATCCAGGCTCCAAGTGAGCCTCATGCCCTCGGCTaGCACCTCCTCTCTCTAGTCCTAACATTTCCTCCA +
Preference number: 6 (lower is better)
Translates to: GIQAPSEPHALG*HLLSLVLTFPP
Trigger: TGGAGGAAATGTTAGGACTAGAGAGAGGAGGTGCCAGCCGAGGGCATGAGGCTCACTTGGAGCCTGGATCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483362.1
CDS CCA 72 bp GATAAGAGTCCAGGAGGTTGGCACAGTGATCCTGAGTaGGTTATTGCCTCCCCGCAGCATGGTGTCCAGCCC +
Preference number: 6 (lower is better)
Translates to: DKSPGGWHSDPE*VIASPQHGVQP
Trigger: GGGCTGGACACCATGCTGCGGGGAGGCAATAACCCACTCAGGATCACTGTGCCAACCTCCTGGACTCTTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483362.1
CDS CAA 90 bp GTGATAAGAGTCCAGGAGGTTGGCACAGTGATCCTGAGTGGGTTATaGCCTCCCCGCAGCATGGTGTCCAGCCCAGGGAGTTCTGCGTTT +
Preference number: 6 (lower is better)
Translates to: VIRVQEVGTVILSGL*PPRSMVSSPGSSAF
Trigger: AAACGCAGAACTCCCTGGGCTGGACACCATGCTGCGGGGAGGCAATAACCCACTCAGGATCACTGTGCCAACCTCCTGGACTCTTATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483362.1
CDS TCA 72 bp CCTCCTCTCTCTAGTCCTAACATTTCCTCCAGGCTCTaGCAGCAGCCTGGCACTCTCCAGATGCTGGCATCG +
Preference number: 6 (lower is better)
Translates to: PPLSSPNISSRL*QQPGTLQMLAS
Trigger: CGATGCCAGCATCTGGAGAGTGCCAGGCTGCTGTCAGAGCCTGGAGGAAATGTTAGGACTAGAGAGAGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483362.1
CDS CCA 72 bp TCCAGATGCTGGCATCGCTCAGCTTCCAAAGAACCTTaGATGTCCGCCCCTTCGGCAGCTATGTCTGCTCTC +
Preference number: 6 (lower is better)
Translates to: SRCWHRSASKEP*MSAPSAAMSAL
Trigger: GAGAGCAGACATAGCTGCCGAAGGGGCGGACATCCAAGGTTCTTTGGAAGCTGAGCGATGCCAGCATCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483362.1
CDS CAA 72 bp CTCCAGATGCTGGCATCGCTCAGCTTCCAAAGAACCTaGGATGTCCGCCCCTTCGGCAGCTATGTCTGCTCT +
Preference number: 6 (lower is better)
Translates to: LQMLASLSFQRT*DVRPFGSYVCS
Trigger: AGAGCAGACATAGCTGCCGAAGGGGCGGACATCCAAGGTTCTTTGGAAGCTGAGCGATGCCAGCATCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483362.1
CDS CAA 72 bp TGTCCAGCCCAGGGAGTTCTGCGTTTACTGAGTTTCTaGGGGCACCCATCTGCTCCAAGTCACCCTCTCAGC +
Preference number: 6 (lower is better)
Translates to: CPAQGVLRLLSF*GHPSAPSHPLS
Trigger: GCTGAGAGGGTGACTTGGAGCAGATGGGTGCCCCAAGAAACTCAGTAAACGCAGAACTCCCTGGGCTGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483362.1
CDS CCA 72 bp TTATGGTTGCTATTGCAAACCATTCTAGGTCCACACTaGGTGCCTGGCTCTACCAGGCCCAGGCCAAGCAGG +
Preference number: 6 (lower is better)
Translates to: LWLLLQTILGPH*VPGSTRPRPSR
Trigger: CCTGCTTGGCCTGGGCCTGGTAGAGCCAGGCACCCAGTGTGGACCTAGAATGGTTTGCAATAGCAACCATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350009.6
ENST00000466620.5
CDS CCA 72 bp TTTGGGGCTGAGCAACGTGATAAGAGTCCAGGAGGTTaGCACAGTGATCCTGAGTGGGTTATTGCCTCCCCG +
Preference number: 6 (lower is better)
Translates to: FGAEQRDKSPGG*HSDPEWVIASP
Trigger: CGGGGAGGCAATAACCCACTCAGGATCACTGTGCCAACCTCCTGGACTCTTATCACGTTGCTCAGCCCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483362.1
CDS GCA 72 bp TCCAGGAGACGCTGTTTGGTGTGGTTCAAGTTTCGGTaGCGAGTCAAGAACAGGGTGTGGTCTGCCACAATG +
Preference number: 6 (lower is better)
Translates to: SRRRCLVWFKFR*RVKNRVWSATM
Trigger: CATTGTGGCAGACCACACCCTGTTCTTGACTCGGCACCGAAACTTGAACCACACCAAACAGCGTCTCCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS CCA 72 bp GGTCCACGTAGTTGGCGACTTCCAGGAGACGCTGTTTaGTGTGGTTCAAGTTTCGGTGCCGAGTCAAGAACA +
Preference number: 6 (lower is better)
Translates to: GPRSWRLPGDAV*CGSSFGAESRT
Trigger: TGTTCTTGACTCGGCACCGAAACTTGAACCACACCAAACAGCGTCTCCTGGAAGTCGCCAACTACGTGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350009.6
ENST00000356518.7
ENST00000379861.8
ENST00000619289.4
CDS CCA 72 bp TGGTATGGAGTGAAAAGATGTGCTGGGCCCAGCATTTaGGAACTTCAAGGGGGTGACAGAGGTGATTTGTGC +
Preference number: 6 (lower is better)
Translates to: WYGVKRCAGPSI*ELQGGDRGDLC
Trigger: GCACAAATCACCTCTGTCACCCCCTTGAAGTTCCCAAATGCTGGGCCCAGCACATCTTTTCACTCCATACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483362.1
CDS CCA 72 bp GGGCTCATGAGAGTTCTCAGGGTCTGGGAGAAATGGTaGAGGGTAAATGTTGTGAATATGGTCAGCAGGAGC +
Preference number: 6 (lower is better)
Translates to: GLMRVLRVWEKW*RVNVVNMVSRS
Trigger: GCTCCTGCTGACCATATTCACAACATTTACCCTCCACCATTTCTCCCAGACCCTGAGAACTCTCATGAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483362.1
CDS GCA 72 bp TCGGAAAATAATCTTCATACCGTTGAGAATCCACTTTaGCTGAGCTTCTTCCCTTTAAGCCTCATAAACCAC +
Preference number: 6 (lower is better)
Translates to: SENNLHTVENPL*LSFFPLSLINH
Trigger: GTGGTTTATGAGGCTTAAAGGGAAGAAGCTCAGGCAAAGTGGATTCTCAACGGTATGAAGATTATTTTCCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466620.5