RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADAM30 (Homo sapiens)

Ensembl gene IDs: ENSG00000134249

Ensembl transcript IDs: ENST00000369400.2

Found 150 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTCACATGGATCAAGTTGAGGGAGGCAGAGGGAGAGGCAGACAATTaGTTTGTTCCCTGGGATTCTGAGAAACAAGACTATACCTTGAAT +
Preference number: 1 (lower is better)
Translates to: FTWIKLREAEGEADN*FVPWDSEKQDYTLN
Trigger: ATTCAAGGTATAGTCTTGTTTCTCAGAATCCCAGGGAACAAAGCAATTGTCTGCCTCTCCCTCTGCCTCCCTCAACTTGATCCATGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
3UTR TCA 90 bp CCATTAGAGCATGATTCTCAGAATACCCACAACTTGGTCACAAACTaGGGGGCAAGTGAACACTCGAGAAGTAGAATGCACTGGTTTGTT +
Preference number: 1 (lower is better)
Translates to: PLEHDSQNTHNLVTN*GASEHSRSRMHWFV
Trigger: AACAAACCAGTGCATTCTACTTCTCGAGTGTTCACTTGCCCCTCAGTTTGTGACCAAGTTGTGGGTATTCTGAGAATCATGCTCTAATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369400.2
3UTR-3UTR TCA 90 bp GGGAGGCAGAGGGAGAGGCAGACAATTGCTTTGTTCCCTGGGATTCTGAGAAACATGAGCCTGTGTTACTaGATGAGTATGGATTGCCCG +
Preference number: 2 (lower is better)
Translates to: GRQRERQTIALFPGILRNMSLCY*MSMDCP
Trigger: CGGGCAATCCATACTCATTCAGTAACACAGGCTCAT...GTTTCTCAGAATCCCAGGGAACAAAGCAATTGTCTGCCTCTCCCTCTGCCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
3UTR-3UTR TCA 90 bp TGTCGGCATTTATTGATCAGCATGGGTGCAGGTGCGGATGTTCACATGGATCAAAACTTGGTCACAAACTaGGGGGCAAGTGAACACTCG +
Preference number: 2 (lower is better)
Translates to: CRHLLISMGAGADVHMDQNLVTN*GASEHS
Trigger: CGAGTGTTCACTTGCCCCTCAGTTTGTGACCAAGTT...TTGATCCATGTGAACATCCGCACCTGCACCCATGCTGATCAATAAATGCCGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369400.2
3UTR-3UTR CCA 90 bp TGTCGGCATTTATTGATCAGCATGGGTGCAGGTGCGGATGTTCACATGGATCAAAGAATACCCACAACTTaGTCACAAACTGAGGGGCAA +
Preference number: 2 (lower is better)
Translates to: CRHLLISMGAGADVHMDQRIPTT*SQTEGQ
Trigger: TTGCCCCTCAGTTTGTGACCAAGTTGTGGGTATTCT...TTGATCCATGTGAACATCCGCACCTGCACCCATGCTGATCAATAAATGCCGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369400.2
3UTR-3UTR GCA 90 bp GCAGAGGGAGAGGCAGACAATTGCTTTGTTCCCTGGGATTCTGAGAAACAAGACACTCGAGAAGTAGAATaGACTGGTTTGTTTCCAAAA +
Preference number: 2 (lower is better)
Translates to: AEGEADNCFVPWDSEKQDTREVE*TGLFPK
Trigger: TTTTGGAAACAAACCAGTGCATTCTACTTCTCGAGT...GTCTTGTTTCTCAGAATCCCAGGGAACAAAGCAATTGTCTGCCTCTCCCTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
3UTR CAA 90 bp GACAATTGCTTTGTTCCCTGGGATTCTGAGAAACAAGACTATACCTaGAATAGCATGGTAATTCTAGGAAACTCACTACTTTCAGAGCTT +
Preference number: 2 (lower is better)
Translates to: DNCFVPWDSEKQDYT*NSMVILGNSLLSEL
Trigger: AAGCTCTGAAAGTAGTGAGTTTCCTAGAATTACCATGCTATTCAAGGTATAGTCTTGTTTCTCAGAATCCCAGGGAACAAAGCAATTGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
3UTR CCA 72 bp GAGGCAGAGGGAGAGGCAGACAATTGCTTTGTTCCCTaGGATTCTGAGAAACAAGACTATACCTTGAATAGC +
Preference number: 3 (lower is better)
Translates to: EAEGEADNCFVP*DSEKQDYTLNS
Trigger: GCTATTCAAGGTATAGTCTTGTTTCTCAGAATCCCAGGGAACAAAGCAATTGTCTGCCTCTCCCTCTGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
3UTR-3UTR CAA 90 bp TTATTGATCAGCATGGGTGCAGGTGCGGATGTTCACATGGATCAAGTTGAGGGAGTAGAATGCACTGGTTaGTTTCCAAAACAAGAATGC +
Preference number: 3 (lower is better)
Translates to: LLISMGAGADVHMDQVEGVECTG*FPKQEC
Trigger: GCATTCTTGTTTTGGAAACAAACCAGTGCATTCTAC...TCCCTCAACTTGATCCATGTGAACATCCGCACCTGCACCCATGCTGATCAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369400.2
3UTR TCA 72 bp TTCAGAGCTTTAGTGTATGGAAAAGCCATTAGAGCATaGTTCTCAGAATACCCACAACTTGGTCACAAACTG +
Preference number: 3 (lower is better)
Translates to: FRALVYGKAIRA*FSEYPQLGHKL
Trigger: CAGTTTGTGACCAAGTTGTGGGTATTCTGAGAATCATGCTCTAATGGCTTTTCCATACACTAAAGCTCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR CCA 90 bp GCAGAGGGAGAGGCAGACAATTGCTTTGTTCCCTGGGATTCTGAGAAACAAGACCGCGAGTCAGATTTCTaGGGGCCGCCGCTAGAGGCG +
Preference number: 4 (lower is better)
Translates to: AEGEADNCFVPWDSEKQDRESDF*GPPLEA
Trigger: CGCCTCTAGCGGCGGCCCCCAGAAATCTGACTCGCG...GTCTTGTTTCTCAGAATCCCAGGGAACAAAGCAATTGTCTGCCTCTCCCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR TCA 90 bp TGTCGGCATTTATTGATCAGCATGGGTGCAGGTGCGGATGTTCACATGGATCAAAGGGAATCGCCCCTCTaGGCAGTCCTGGAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: CRHLLISMGAGADVHMDQRESPL*AVLEAH
Trigger: GTGGGCCTCCAGGACTGCTCAGAGGGGCGATTCCCT...TTGATCCATGTGAACATCCGCACCTGCACCCATGCTGATCAATAAATGCCGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR TCA 90 bp TTATTGATCAGCATGGGTGCAGGTGCGGATGTTCACATGGATCAAGTTGAGGGAGGTAGGACACGGGACTaGCCACACCCTGCACCTCTC +
Preference number: 4 (lower is better)
Translates to: LLISMGAGADVHMDQVEGGRTRD*PHPAPL
Trigger: GAGAGGTGCAGGGTGTGGTCAGTCCCGTGTCCTACC...TCCCTCAACTTGATCCATGTGAACATCCGCACCTGCACCCATGCTGATCAATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR CCA 90 bp GCAGAGGGAGAGGCAGACAATTGCTTTGTTCCCTGGGATTCTGAGAAACAAGACCCCTCTGAGCAGTCCTaGAGGCCCACTGTCAATGCT +
Preference number: 4 (lower is better)
Translates to: AEGEADNCFVPWDSEKQDPSEQS*RPTVNA
Trigger: AGCATTGACAGTGGGCCTCCAGGACTGCTCAGAGGG...GTCTTGTTTCTCAGAATCCCAGGGAACAAAGCAATTGTCTGCCTCTCCCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR TCA 90 bp AGTGAACACTCGAGAAGTAGAATGCACTGGTTTGTTTCCAAAACAAGAATGCTGGCCGCTAGAGGCGCCTaGGCTCAAAACCCGGCTCCC +
Preference number: 4 (lower is better)
Translates to: SEHSRSRMHWFVSKTRMLAARGA*AQNPAP
Trigger: GGGAGCCGGGTTTTGAGCTCAGGCGCCTCTAGCGGC...CAGCATTCTTGTTTTGGAAACAAACCAGTGCATTCTACTTCTCGAGTGTTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR CCA 90 bp GGGAGGCAGAGGGAGAGGCAGACAATTGCTTTGTTCCCTGGGATTCTGAGAAACAGGAGCAAACGGCATTaGGAGAGGAAGATCTGCACT +
Preference number: 4 (lower is better)
Translates to: GRQRERQTIALFPGILRNRSKRH*ERKICT
Trigger: AGTGCAGATCTTCCTCTCCCAATGCCGTTTGCTCCT...GTTTCTCAGAATCCCAGGGAACAAAGCAATTGTCTGCCTCTCCCTCTGCCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR GCA 90 bp GCAGAGGGAGAGGCAGACAATTGCTTTGTTCCCTGGGATTCTGAGAAACAAGACTTGCTATTCAGTCCCTaGAACTCTGGCCTCGCGAGT +
Preference number: 4 (lower is better)
Translates to: AEGEADNCFVPWDSEKQDLLFSP*NSGLAS
Trigger: ACTCGCGAGGCCAGAGTTGCAGGGACTGAATAGCAA...GTCTTGTTTCTCAGAATCCCAGGGAACAAAGCAATTGTCTGCCTCTCCCTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR GCA 90 bp GGGAGGCAGAGGGAGAGGCAGACAATTGCTTTGTTCCCTGGGATTCTGAGAAACGACAGCAAAGTCCAATaGTACAGTTGGCACCTGGTT +
Preference number: 4 (lower is better)
Translates to: GRQRERQTIALFPGILRNDSKVQ*YSWHLV
Trigger: AACCAGGTGCCAACTGTAGCATTGGACTTTGCTGTC...GTTTCTCAGAATCCCAGGGAACAAAGCAATTGTCTGCCTCTCCCTCTGCCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR GCA 90 bp GCAGAGGGAGAGGCAGACAATTGCTTTGTTCCCTGGGATTCTGAGAAACAAGACCTCACAGAATGGAGGTaGCCACCCATACATGCAGTG +
Preference number: 4 (lower is better)
Translates to: AEGEADNCFVPWDSEKQDLTEWR*PPIHAV
Trigger: CACTGCATGTATGGGTGGGCACCTCCATTCTGTGAG...GTCTTGTTTCTCAGAATCCCAGGGAACAAAGCAATTGTCTGCCTCTCCCTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR CCA 90 bp GCAGAGGGAGAGGCAGACAATTGCTTTGTTCCCTGGGATTCTGAGAAACAAGACCTCTTGGGCCACAAATaGAGGACGTGCTTCTTGCCT +
Preference number: 4 (lower is better)
Translates to: AEGEADNCFVPWDSEKQDLLGHK*RTCFLP
Trigger: AGGCAAGAAGCACGTCCTCCATTTGTGGCCCAAGAG...GTCTTGTTTCTCAGAATCCCAGGGAACAAAGCAATTGTCTGCCTCTCCCTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR TCA 90 bp TGTCGGCATTTATTGATCAGCATGGGTGCAGGTGCGGATGTTCACATGGATCAAGAGGAAGATCTGCACTaGCCTCATGGTCTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: CRHLLISMGAGADVHMDQEEDLH*PHGLFP
Trigger: AGGGAACAGACCATGAGGTCAGTGCAGATCTTCCTC...TTGATCCATGTGAACATCCGCACCTGCACCCATGCTGATCAATAAATGCCGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR TCA 90 bp GGGAGGCAGAGGGAGAGGCAGACAATTGCTTTGTTCCCTGGGATTCTGAGAAACGCTTCTCAGGAATGGTaGCTTCATACGAGTCAAACT +
Preference number: 4 (lower is better)
Translates to: GRQRERQTIALFPGILRNASQEW*LHTSQT
Trigger: AGTTTGACTCGTATGAAGTCACCATTCCTGAGAAGC...GTTTCTCAGAATCCCAGGGAACAAAGCAATTGTCTGCCTCTCCCTCTGCCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR GCA 90 bp TGTCGGCATTTATTGATCAGCATGGGTGCAGGTGCGGATGTTCACATGGATCAACAGCATGGGTGCAGGTaGGGATGTTCACATGGATCA +
Preference number: 4 (lower is better)
Translates to: CRHLLISMGAGADVHMDQQHGCR*GCSHGS
Trigger: TGATCCATGTGAACATCCGCACCTGCACCCATGCTG...TTGATCCATGTGAACATCCGCACCTGCACCCATGCTGATCAATAAATGCCGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR CCA 90 bp CATTTATTGATCAGCATGGGTGCAGGTGCGGATGTTCACATGGATCAAGTTGAGCAGTCCCTGCAACTCTaGCCTCGCGAGTCAGATTTC +
Preference number: 4 (lower is better)
Translates to: HLLISMGAGADVHMDQVEQSLQL*PRESDF
Trigger: GAAATCTGACTCGCGAGGCCAGAGTTGCAGGGACTG...CTCAACTTGATCCATGTGAACATCCGCACCTGCACCCATGCTGATCAATAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR TCA 90 bp GGGAGGCAGAGGGAGAGGCAGACAATTGCTTTGTTCCCTGGGATTCTGAGAAACGTATTGTTCATCATGTaGCATTCCTACAGCATGACC +
Preference number: 4 (lower is better)
Translates to: GRQRERQTIALFPGILRNVLFIM*HSYSMT
Trigger: GGTCATGCTGTAGGAATGTCACATGATGAACAATAC...GTTTCTCAGAATCCCAGGGAACAAAGCAATTGTCTGCCTCTCCCTCTGCCTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR TCA 90 bp TGTCGGCATTTATTGATCAGCATGGGTGCAGGTGCGGATGTTCACATGGATCAACAACACCGATCTTTCTaGCACTCCTCTGTGGAACCA +
Preference number: 4 (lower is better)
Translates to: CRHLLISMGAGADVHMDQQHRSF*HSSVEP
Trigger: TGGTTCCACAGAGGAGTGTCAGAAAGATCGGTGTTG...TTGATCCATGTGAACATCCGCACCTGCACCCATGCTGATCAATAAATGCCGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR TCA 90 bp TGTCGGCATTTATTGATCAGCATGGGTGCAGGTGCGGATGTTCACATGGATCAAATTTGGGCAGGAACTTaGATTCCCGTCGCAGTACTC +
Preference number: 4 (lower is better)
Translates to: CRHLLISMGAGADVHMDQIWAGT*IPVAVL
Trigger: GAGTACTGCGACGGGAATTCAAGTTCCTGCCCAAAT...TTGATCCATGTGAACATCCGCACCTGCACCCATGCTGATCAATAAATGCCGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR TCA 90 bp TTATTGATCAGCATGGGTGCAGGTGCGGATGTTCACATGGATCAAGTTGAGGGAATCTGCACCCCTTCCTaGAACAACGGCCTTCATACT +
Preference number: 4 (lower is better)
Translates to: LLISMGAGADVHMDQVEGICTPS*NNGLHT
Trigger: AGTATGAAGGCCGTTGTTTCAGGAAGGGGTGCAGAT...TCCCTCAACTTGATCCATGTGAACATCCGCACCTGCACCCATGCTGATCAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR TCA 90 bp TGTCGGCATTTATTGATCAGCATGGGTGCAGGTGCGGATGTTCACATGGATCAAGTTGTCGGCATTTATTaGTCAGCATGGGTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: CRHLLISMGAGADVHMDQVVGIY*SAWVQV
Trigger: CACCTGCACCCATGCTGATCAATAAATGCCGACAAC...TTGATCCATGTGAACATCCGCACCTGCACCCATGCTGATCAATAAATGCCGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR GCA 90 bp CATTTATTGATCAGCATGGGTGCAGGTGCGGATGTTCACATGGATCAAGTTGAGGAGGCCCACTGTCAATaGTTCCTCCATACCCCACTT +
Preference number: 4 (lower is better)
Translates to: HLLISMGAGADVHMDQVEEAHCQ*FLHTPL
Trigger: AAGTGGGGTATGGAGGAAGCATTGACAGTGGGCCTC...CTCAACTTGATCCATGTGAACATCCGCACCTGCACCCATGCTGATCAATAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR CCA 90 bp TTATTGATCAGCATGGGTGCAGGTGCGGATGTTCACATGGATCAAGTTGAGGGACACTTCCTCACAGAATaGAGGTGCCCACCCATACAT +
Preference number: 4 (lower is better)
Translates to: LLISMGAGADVHMDQVEGHFLTE*RCPPIH
Trigger: ATGTATGGGTGGGCACCTCCATTCTGTGAGGAAGTG...TCCCTCAACTTGATCCATGTGAACATCCGCACCTGCACCCATGCTGATCAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR CCA 90 bp TGTCGGCATTTATTGATCAGCATGGGTGCAGGTGCGGATGTTCACATGGATCAAGTGCGGATGTTCACATaGATCAAGTTGAGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: CRHLLISMGAGADVHMDQVRMFT*IKLREA
Trigger: TGCCTCCCTCAACTTGATCCATGTGAACATCCGCAC...TTGATCCATGTGAACATCCGCACCTGCACCCATGCTGATCAATAAATGCCGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR TCA 90 bp GCAGAGGGAGAGGCAGACAATTGCTTTGTTCCCTGGGATTCTGAGAAACAAGACAACTCCCCTTCAGGGTaGAAAATTACATCTTCGCCA +
Preference number: 4 (lower is better)
Translates to: AEGEADNCFVPWDSEKQDNSPSG*KITSSP
Trigger: TGGCGAAGATGTAATTTTTCACCCTGAAGGGGAGTT...GTCTTGTTTCTCAGAATCCCAGGGAACAAAGCAATTGTCTGCCTCTCCCTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR TCA 90 bp CATTTATTGATCAGCATGGGTGCAGGTGCGGATGTTCACATGGATCAAGTTGAGGTTCCCCATGTTCTGTaGAGGAGAAAACGCGCAGAT +
Preference number: 4 (lower is better)
Translates to: HLLISMGAGADVHMDQVEVPHVL*RRKRAD
Trigger: ATCTGCGCGTTTTCTCCTTCACAGAACATGGGGAAC...CTCAACTTGATCCATGTGAACATCCGCACCTGCACCCATGCTGATCAATAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR TCA 90 bp GCAGAGGGAGAGGCAGACAATTGCTTTGTTCCCTGGGATTCTGAGAAACAAGACCTTAAGCCACAAACCTaGTTCCCAAACTGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: AEGEADNCFVPWDSEKQDLKPQT*FPNCSF
Trigger: GAAAGAGCAGTTTGGGAATCAGGTTTGTGGCTTAAG...GTCTTGTTTCTCAGAATCCCAGGGAACAAAGCAATTGTCTGCCTCTCCCTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR TCA 90 bp TGTCGGCATTTATTGATCAGCATGGGTGCAGGTGCGGATGTTCACATGGATCAACTGTGCCCCAGCACATaGGATTTTCTGCCTGTAAAT +
Preference number: 4 (lower is better)
Translates to: CRHLLISMGAGADVHMDQLCPST*DFLPVN
Trigger: ATTTACAGGCAGAAAATCTCATGTGCTGGGGCACAG...TTGATCCATGTGAACATCCGCACCTGCACCCATGCTGATCAATAAATGCCGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR TCA 90 bp CATTTATTGATCAGCATGGGTGCAGGTGCGGATGTTCACATGGATCAAGTTGAGAACTTGGTCACAAACTaGGGGGCAAGTGAACACTCG +
Preference number: 4 (lower is better)
Translates to: HLLISMGAGADVHMDQVENLVTN*GASEHS
Trigger: CGAGTGTTCACTTGCCCCTCAGTTTGTGACCAAGTT...CTCAACTTGATCCATGTGAACATCCGCACCTGCACCCATGCTGATCAATAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR GCA 90 bp TGTCGGCATTTATTGATCAGCATGGGTGCAGGTGCGGATGTTCACATGGATCAACGGAGCCCATGTAGTTaGAGTCCTTTGGTATGTAAG +
Preference number: 4 (lower is better)
Translates to: CRHLLISMGAGADVHMDQRSPCS*SPLVCK
Trigger: CTTACATACCAAAGGACTGCAACTACATGGGCTCCG...TTGATCCATGTGAACATCCGCACCTGCACCCATGCTGATCAATAAATGCCGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR CCA 90 bp TGTCGGCATTTATTGATCAGCATGGGTGCAGGTGCGGATGTTCACATGGATCAATCTGACACTCCTCTGTaGAACCACAGTCACATTCCT +
Preference number: 4 (lower is better)
Translates to: CRHLLISMGAGADVHMDQSDTPL*NHSHIP
Trigger: AGGAATGTGACTGTGGTTCCACAGAGGAGTGTCAGA...TTGATCCATGTGAACATCCGCACCTGCACCCATGCTGATCAATAAATGCCGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR CCA 90 bp TTATTGATCAGCATGGGTGCAGGTGCGGATGTTCACATGGATCAAGTTGAGGGAGTCCAATGCTACAGTTaGCACCTGGTTGCAACTTAC +
Preference number: 4 (lower is better)
Translates to: LLISMGAGADVHMDQVEGVQCYS*HLVATY
Trigger: GTAAGTTGCAACCAGGTGCCAACTGTAGCATTGGAC...TCCCTCAACTTGATCCATGTGAACATCCGCACCTGCACCCATGCTGATCAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR TCA 90 bp GACAATTGCTTTGTTCCCTGGGATTCTGAGAAACAAGACTATACCTTGAATAGCTCACATGGATCAAGTTaGGGGAGGCAGAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: DNCFVPWDSEKQDYTLNSSHGSS*GRQRER
Trigger: CCTCTCCCTCTGCCTCCCTCAACTTGATCCATGTGA...GCTATTCAAGGTATAGTCTTGTTTCTCAGAATCCCAGGGAACAAAGCAATTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR GCA 90 bp TTATTGATCAGCATGGGTGCAGGTGCGGATGTTCACATGGATCAAGTTGAGGGATACTCAGCCTCAGTTTaGTATTCAGTCCCTGCAACT +
Preference number: 4 (lower is better)
Translates to: LLISMGAGADVHMDQVEGYSASV*YSVPAT
Trigger: AGTTGCAGGGACTGAATAGCAAACTGAGGCTGAGTA...TCCCTCAACTTGATCCATGTGAACATCCGCACCTGCACCCATGCTGATCAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR GCA 90 bp TTATTGATCAGCATGGGTGCAGGTGCGGATGTTCACATGGATCAAGTTGAGGGACTTCTCCACAGGAGGTaGCATCATTTATCATACCTA +
Preference number: 4 (lower is better)
Translates to: LLISMGAGADVHMDQVEGLLHRR*HHLSYL
Trigger: TAGGTATGATAAATGATGGCACCTCCTGTGGAGAAG...TCCCTCAACTTGATCCATGTGAACATCCGCACCTGCACCCATGCTGATCAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR CCA 90 bp TGTCGGCATTTATTGATCAGCATGGGTGCAGGTGCGGATGTTCACATGGATCAAAGCCTACCCCTACATTaGCAGTATTGTTCATCATGT +
Preference number: 4 (lower is better)
Translates to: CRHLLISMGAGADVHMDQSLPLH*QYCSSC
Trigger: ACATGATGAACAATACTGCCAATGTAGGGGTAGGCT...TTGATCCATGTGAACATCCGCACCTGCACCCATGCTGATCAATAAATGCCGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR CCA 90 bp CATTTATTGATCAGCATGGGTGCAGGTGCGGATGTTCACATGGATCAAGTTGAGAGAATACCCACAACTTaGTCACAAACTGAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: HLLISMGAGADVHMDQVERIPTT*SQTEGQ
Trigger: TTGCCCCTCAGTTTGTGACCAAGTTGTGGGTATTCT...CTCAACTTGATCCATGTGAACATCCGCACCTGCACCCATGCTGATCAATAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR CCA 90 bp GCAGAGGGAGAGGCAGACAATTGCTTTGTTCCCTGGGATTCTGAGAAACAAGACAATTGCTTTGTTCCCTaGGATTCTGAGAAACAAGAC +
Preference number: 4 (lower is better)
Translates to: AEGEADNCFVPWDSEKQDNCFVP*DSEKQD
Trigger: GTCTTGTTTCTCAGAATCCCAGGGAACAAAGCAATT...GTCTTGTTTCTCAGAATCCCAGGGAACAAAGCAATTGTCTGCCTCTCCCTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR TCA 90 bp GACAATTGCTTTGTTCCCTGGGATTCTGAGAAACAAGACTATACCTTGAATAGCAACTGGGAGAGGCCTTaGGGGGCTCAATTTGGTAAT +
Preference number: 4 (lower is better)
Translates to: DNCFVPWDSEKQDYTLNSNWERP*GAQFGN
Trigger: ATTACCAAATTGAGCCCCTCAAGGCCTCTCCCAGTT...GCTATTCAAGGTATAGTCTTGTTTCTCAGAATCCCAGGGAACAAAGCAATTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR TCA 90 bp TTATTGATCAGCATGGGTGCAGGTGCGGATGTTCACATGGATCAAGTTGAGGGAAAAGCCATTAGAGCATaGTTCTCAGAATACCCACAA +
Preference number: 4 (lower is better)
Translates to: LLISMGAGADVHMDQVEGKAIRA*FSEYPQ
Trigger: TTGTGGGTATTCTGAGAATCATGCTCTAATGGCTTT...TCCCTCAACTTGATCCATGTGAACATCCGCACCTGCACCCATGCTGATCAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR GCA 90 bp GACAATTGCTTTGTTCCCTGGGATTCTGAGAAACAAGACTATACCTTGAATAGCAACGGCCTTCATACTTaGAAGGGGTTCCATCCTGCT +
Preference number: 4 (lower is better)
Translates to: DNCFVPWDSEKQDYTLNSNGLHT*KGFHPA
Trigger: AGCAGGATGGAACCCCTTGCAAGTATGAAGGCCGTT...GCTATTCAAGGTATAGTCTTGTTTCTCAGAATCCCAGGGAACAAAGCAATTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR CCA 90 bp TGTCGGCATTTATTGATCAGCATGGGTGCAGGTGCGGATGTTCACATGGATCAAGGTCCAAAAATGCTTTaGCACTGCATATATCTGGAT +
Preference number: 4 (lower is better)
Translates to: CRHLLISMGAGADVHMDQGPKML*HCIYLD
Trigger: ATCCAGATATATGCAGTGCCAAAGCATTTTTGGACC...TTGATCCATGTGAACATCCGCACCTGCACCCATGCTGATCAATAAATGCCGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR CCA 90 bp CATTTATTGATCAGCATGGGTGCAGGTGCGGATGTTCACATGGATCAAGTTGAGTATAGTCGTATGCTCTaGCAAATCAGGGATGGTTTC +
Preference number: 4 (lower is better)
Translates to: HLLISMGAGADVHMDQVEYSRML*QIRDGF
Trigger: GAAACCATCCCTGATTTGCCAGAGCATACGACTATA...CTCAACTTGATCCATGTGAACATCCGCACCTGCACCCATGCTGATCAATAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR TCA 90 bp GAAGTAGAATGCACTGGTTTGTTTCCAAAACAAGAATGCTGTTTATTTGCTGATGGACACAACCCAAATTaGCGAGGGAATCGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: EVECTGLFPKQECCLFADGHNPN*RGNRPS
Trigger: AGAGGGGCGATTCCCTCGTCAATTTGGGTTGTGTCC...ATCAGCAAATAAACAGCATTCTTGTTTTGGAAACAAACCAGTGCATTCTACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR TCA 90 bp AGTGAACACTCGAGAAGTAGAATGCACTGGTTTGTTTCCAAAACAAGAATGCTGATGAGCCTGTGTTACTaGATGAGTATGGATTGCCCG +
Preference number: 4 (lower is better)
Translates to: SEHSRSRMHWFVSKTRMLMSLCY*MSMDCP
Trigger: CGGGCAATCCATACTCATTCAGTAACACAGGCTCAT...CAGCATTCTTGTTTTGGAAACAAACCAGTGCATTCTACTTCTCGAGTGTTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR GCA 90 bp AGTGAACACTCGAGAAGTAGAATGCACTGGTTTGTTTCCAAAACAAGAATGCTGGGAGGACGTGCTTCTTaGCTTTTAACTGCAGTAGGT +
Preference number: 4 (lower is better)
Translates to: SEHSRSRMHWFVSKTRMLGGRAS*LLTAVG
Trigger: ACCTACTGCAGTTAAAAGGCAAGAAGCACGTCCTCC...CAGCATTCTTGTTTTGGAAACAAACCAGTGCATTCTACTTCTCGAGTGTTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR TCA 90 bp GACTATACCTTGAATAGCATGGTAATTCTAGGAAACTCACTACTTTCAGAGCTTAAACCCAGTGCGTCCTaGGCCCATGATGCAATTAAG +
Preference number: 4 (lower is better)
Translates to: DYTLNSMVILGNSLLSELKPSAS*AHDAIK
Trigger: CTTAATTGCATCATGGGCTCAGGACGCACTGGGTTT...AAGCTCTGAAAGTAGTGAGTTTCCTAGAATTACCATGCTATTCAAGGTATAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR GCA 90 bp AGTGAACACTCGAGAAGTAGAATGCACTGGTTTGTTTCCAAAACAAGAATGCTGCACAAATGGAGGACGTaGTTCTTGCCTTTTAACTGC +
Preference number: 4 (lower is better)
Translates to: SEHSRSRMHWFVSKTRMLHKWRT*FLPFNC
Trigger: GCAGTTAAAAGGCAAGAAGCACGTCCTCCATTTGTG...CAGCATTCTTGTTTTGGAAACAAACCAGTGCATTCTACTTCTCGAGTGTTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR CCA 90 bp GAAGTAGAATGCACTGGTTTGTTTCCAAAACAAGAATGCTGTTTATTTGCTGATTCTGCACTGACCTCATaGTCTGTTCCCTACTCAGCC +
Preference number: 4 (lower is better)
Translates to: EVECTGLFPKQECCLFADSALTS*SVPYSA
Trigger: GGCTGAGTAGGGAACAGACCATGAGGTCAGTGCAGA...ATCAGCAAATAAACAGCATTCTTGTTTTGGAAACAAACCAGTGCATTCTACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR CCA 90 bp GACAATTGCTTTGTTCCCTGGGATTCTGAGAAACAAGACTATACCTTGAATAGCACACACGTATCCAGATaGACGAAACCGACAATCATG +
Preference number: 4 (lower is better)
Translates to: DNCFVPWDSEKQDYTLNSTHVSR*TKPTIM
Trigger: CATGATTGTCGGTTTCGTCCATCTGGATACGTGTGT...GCTATTCAAGGTATAGTCTTGTTTCTCAGAATCCCAGGGAACAAAGCAATTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR CCA 90 bp AGTGAACACTCGAGAAGTAGAATGCACTGGTTTGTTTCCAAAACAAGAATGCTGTTCCCATGGGTTTCATaGATAGATGATAGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: SEHSRSRMHWFVSKTRMLFPWVS*IDDSLC
Trigger: GCACAGGCTATCATCTATCCATGAAACCCATGGGAA...CAGCATTCTTGTTTTGGAAACAAACCAGTGCATTCTACTTCTCGAGTGTTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR TCA 90 bp GACTATACCTTGAATAGCATGGTAATTCTAGGAAACTCACTACTTTCAGAGCTTGCCTGTGTTACTGAATaGGTATGGATTGCCCGGTTA +
Preference number: 4 (lower is better)
Translates to: DYTLNSMVILGNSLLSELACVTE*VWIARL
Trigger: TAACCGGGCAATCCATACTCATTCAGTAACACAGGC...AAGCTCTGAAAGTAGTGAGTTTCCTAGAATTACCATGCTATTCAAGGTATAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR GCA 90 bp GACTATACCTTGAATAGCATGGTAATTCTAGGAAACTCACTACTTTCAGAGCTTGGCAAACAGTCAAACTaGAGGACTGAGCTATTGACG +
Preference number: 4 (lower is better)
Translates to: DYTLNSMVILGNSLLSELGKQSN*RTELLT
Trigger: CGTCAATAGCTCAGTCCTGCAGTTTGACTGTTTGCC...AAGCTCTGAAAGTAGTGAGTTTCCTAGAATTACCATGCTATTCAAGGTATAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR GCA 90 bp AACACTCGAGAAGTAGAATGCACTGGTTTGTTTCCAAAACAAGAATGCTGTTTAGGAGAGGCAGACAATTaGTTTGTTCCCTGGGATTCT +
Preference number: 4 (lower is better)
Translates to: NTREVECTGLFPKQECCLGEADN*FVPWDS
Trigger: AGAATCCCAGGGAACAAAGCAATTGTCTGCCTCTCC...TAAACAGCATTCTTGTTTTGGAAACAAACCAGTGCATTCTACTTCTCGAGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR GCA 90 bp AACACTCGAGAAGTAGAATGCACTGGTTTGTTTCCAAAACAAGAATGCTGTTTAATTGATCAGCATGGGTaGAGGTGCGGATGTTCACAT +
Preference number: 4 (lower is better)
Translates to: NTREVECTGLFPKQECCLIDQHG*RCGCSH
Trigger: ATGTGAACATCCGCACCTGCACCCATGCTGATCAAT...TAAACAGCATTCTTGTTTTGGAAACAAACCAGTGCATTCTACTTCTCGAGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR CCA 90 bp GACAATTGCTTTGTTCCCTGGGATTCTGAGAAACAAGACTATACCTTGAATAGCGGTCAGGTATTCCCATaGGTTTCATGGATAGATGAT +
Preference number: 4 (lower is better)
Translates to: DNCFVPWDSEKQDYTLNSGQVFP*VSWIDD
Trigger: ATCATCTATCCATGAAACCCATGGGAATACCTGACC...GCTATTCAAGGTATAGTCTTGTTTCTCAGAATCCCAGGGAACAAAGCAATTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR CCA 90 bp CATTTATTGATCAGCATGGGTGCAGGTGCGGATGTTCACATGGATCAAGTTGAGAGAAGTAGAATGCACTaGTTTGTTTCCAAAACAAGA +
Preference number: 4 (lower is better)
Translates to: HLLISMGAGADVHMDQVERSRMH*FVSKTR
Trigger: TCTTGTTTTGGAAACAAACCAGTGCATTCTACTTCT...CTCAACTTGATCCATGTGAACATCCGCACCTGCACCCATGCTGATCAATAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR TCA 90 bp GAAGTAGAATGCACTGGTTTGTTTCCAAAACAAGAATGCTGTTTATTTGCTGATCGAAACCGACAATCATaGCAGCAAAGTCCAATGCTA +
Preference number: 4 (lower is better)
Translates to: EVECTGLFPKQECCLFADRNRQS*QQSPML
Trigger: TAGCATTGGACTTTGCTGTCATGATTGTCGGTTTCG...ATCAGCAAATAAACAGCATTCTTGTTTTGGAAACAAACCAGTGCATTCTACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR GCA 90 bp GACTATACCTTGAATAGCATGGTAATTCTAGGAAACTCACTACTTTCAGAGCTTCAGTTGGCACCTGGTTaGAACTTACAATTTGATTGG +
Preference number: 4 (lower is better)
Translates to: DYTLNSMVILGNSLLSELQLAPG*NLQFDW
Trigger: CCAATCAAATTGTAAGTTGCAACCAGGTGCCAACTG...AAGCTCTGAAAGTAGTGAGTTTCCTAGAATTACCATGCTATTCAAGGTATAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR GCA 90 bp AACACTCGAGAAGTAGAATGCACTGGTTTGTTTCCAAAACAAGAATGCTGTTTACATTCATTTCCTTCCTaGCTACACACGTATCCAGAT +
Preference number: 4 (lower is better)
Translates to: NTREVECTGLFPKQECCLHSFPS*LHTYPD
Trigger: ATCTGGATACGTGTGTAGGCAGGAAGGAAATGAATG...TAAACAGCATTCTTGTTTTGGAAACAAACCAGTGCATTCTACTTCTCGAGTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR GCA 90 bp AGTGAACACTCGAGAAGTAGAATGCACTGGTTTGTTTCCAAAACAAGAATGCTGACTCGAGAAGTAGAATaGACTGGTTTGTTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: SEHSRSRMHWFVSKTRMLTREVE*TGLFPK
Trigger: TTTTGGAAACAAACCAGTGCATTCTACTTCTCGAGT...CAGCATTCTTGTTTTGGAAACAAACCAGTGCATTCTACTTCTCGAGTGTTCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR CCA 90 bp AACACTCGAGAAGTAGAATGCACTGGTTTGTTTCCAAAACAAGAATGCTGTTTATGTTTGGGTTTTAAGTaGTTTCCTATCACTTGCCGG +
Preference number: 4 (lower is better)
Translates to: NTREVECTGLFPKQECCLCLGFK*FPITCR
Trigger: CCGGCAAGTGATAGGAAACCACTTAAAACCCAAACA...TAAACAGCATTCTTGTTTTGGAAACAAACCAGTGCATTCTACTTCTCGAGTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR TCA 90 bp GAAGTAGAATGCACTGGTTTGTTTCCAAAACAAGAATGCTGTTTATTTGCTGATGTCAAACTGCAGGACTaGGCTATTGACGCAATTTTT +
Preference number: 4 (lower is better)
Translates to: EVECTGLFPKQECCLFADVKLQD*AIDAIF
Trigger: AAAAATTGCGTCAATAGCTCAGTCCTGCAGTTTGAC...ATCAGCAAATAAACAGCATTCTTGTTTTGGAAACAAACCAGTGCATTCTACTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR TCA 90 bp GAAGTAGAATGCACTGGTTTGTTTCCAAAACAAGAATGCTGTTTATTTGCTGATTGTTCCCTGGGATTCTaGGAAACAAGACTATACCTT +
Preference number: 4 (lower is better)
Translates to: EVECTGLFPKQECCLFADCSLGF*ETRLYL
Trigger: AAGGTATAGTCTTGTTTCTCAGAATCCCAGGGAACA...ATCAGCAAATAAACAGCATTCTTGTTTTGGAAACAAACCAGTGCATTCTACTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR GCA 90 bp AACACTCGAGAAGTAGAATGCACTGGTTTGTTTCCAAAACAAGAATGCTGTTTAAAAATGCTTTGGCACTaGATATATCTGGATCTGCAC +
Preference number: 4 (lower is better)
Translates to: NTREVECTGLFPKQECCLKMLWH*IYLDLH
Trigger: GTGCAGATCCAGATATATGCAGTGCCAAAGCATTTT...TAAACAGCATTCTTGTTTTGGAAACAAACCAGTGCATTCTACTTCTCGAGTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR GCA 90 bp GACTATACCTTGAATAGCATGGTAATTCTAGGAAACTCACTACTTTCAGAGCTTGAAATTATAGTCGTATaGTCTGGCAAATCAGGGATG +
Preference number: 4 (lower is better)
Translates to: DYTLNSMVILGNSLLSELEIIVV*SGKSGM
Trigger: CATCCCTGATTTGCCAGAGCATACGACTATAATTTC...AAGCTCTGAAAGTAGTGAGTTTCCTAGAATTACCATGCTATTCAAGGTATAGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR TCA 90 bp GACTATACCTTGAATAGCATGGTAATTCTAGGAAACTCACTACTTTCAGAGCTTGAATGGCATCATGTATaGCTTGAGAAAGATTGTTGT +
Preference number: 4 (lower is better)
Translates to: DYTLNSMVILGNSLLSELEWHHV*LEKDCC
Trigger: ACAACAATCTTTCTCAAGTCATACATGATGCCATTC...AAGCTCTGAAAGTAGTGAGTTTCCTAGAATTACCATGCTATTCAAGGTATAGTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR TCA 90 bp AACACTCGAGAAGTAGAATGCACTGGTTTGTTTCCAAAACAAGAATGCTGTTTATTGCAACTTACAATTTaGTTGGCAACACCGATCTTT +
Preference number: 4 (lower is better)
Translates to: NTREVECTGLFPKQECCLLQLTI*LATPIF
Trigger: AAAGATCGGTGTTGCCAATCAAATTGTAAGTTGCAA...TAAACAGCATTCTTGTTTTGGAAACAAACCAGTGCATTCTACTTCTCGAGTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR GCA 90 bp AACACTCGAGAAGTAGAATGCACTGGTTTGTTTCCAAAACAAGAATGCTGTTTATTATACACTGTAGCCTaGCACATATTGAATTTGCAC +
Preference number: 4 (lower is better)
Translates to: NTREVECTGLFPKQECCLLYTVA*HILNLH
Trigger: GTGCAAATTCAATATGTGGCAGGCTACAGTGTATAA...TAAACAGCATTCTTGTTTTGGAAACAAACCAGTGCATTCTACTTCTCGAGTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR GCA 90 bp AACACTCGAGAAGTAGAATGCACTGGTTTGTTTCCAAAACAAGAATGCTGTTTATTTCTTGACACTCTTTaGTTTGGGTCGTTTACTTTC +
Preference number: 4 (lower is better)
Translates to: NTREVECTGLFPKQECCLFLDTL*FGSFTF
Trigger: GAAAGTAAACGACCCAAAGCAAAGAGTGTCAAGAAA...TAAACAGCATTCTTGTTTTGGAAACAAACCAGTGCATTCTACTTCTCGAGTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR CCA 90 bp GAAGTAGAATGCACTGGTTTGTTTCCAAAACAAGAATGCTGTTTATTTGCTGATCAATTCCAAGTACTTTaGGTGTTTATAGGATCCAGG +
Preference number: 4 (lower is better)
Translates to: EVECTGLFPKQECCLFADQFQVL*VFIGSR
Trigger: CCTGGATCCTATAAACACCCAAAGTACTTGGAATTG...ATCAGCAAATAAACAGCATTCTTGTTTTGGAAACAAACCAGTGCATTCTACTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS CCA 90 bp TTTGCTATTCAGTCCCTGCAACTCTGGCCTCGCGAGTCAGATTTCTaGGGGCCGCCGCTAGAGGCGCCTGAGCTCAAAACCCGGCTCCCC +
Preference number: 5 (lower is better)
Translates to: FAIQSLQLWPRESDF*GPPLEAPELKTRLP
Trigger: GGGGAGCCGGGTTTTGAGCTCAGGCGCCTCTAGCGGCGGCCCCCAGAAATCTGACTCGCGAGGCCAGAGTTGCAGGGACTGAATAGCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS CCA 90 bp CTGTTCCCTACTCAGCCTCAGTTTGCTATTCAGTCCCTGCAACTCTaGCCTCGCGAGTCAGATTTCTGGGGGCCGCCGCTAGAGGCGCCT +
Preference number: 5 (lower is better)
Translates to: LFPTQPQFAIQSLQL*PRESDFWGPPLEAP
Trigger: AGGCGCCTCTAGCGGCGGCCCCCAGAAATCTGACTCGCGAGGCCAGAGTTGCAGGGACTGAATAGCAAACTGAGGCTGAGTAGGGAACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS GCA 90 bp AGATCTGCACTGACCTCATGGTCTGTTCCCTACTCAGCCTCAGTTTaGTATTCAGTCCCTGCAACTCTGGCCTCGCGAGTCAGATTTCTG +
Preference number: 5 (lower is better)
Translates to: RSALTSWSVPYSASV*YSVPATLASRVRFL
Trigger: CAGAAATCTGACTCGCGAGGCCAGAGTTGCAGGGACTGAATAGCAAACTGAGGCTGAGTAGGGAACAGACCATGAGGTCAGTGCAGATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS CCA 90 bp GAAGGAGCAAACGGCATTGGGAGAGGAAGATCTGCACTGACCTCATaGTCTGTTCCCTACTCAGCCTCAGTTTGCTATTCAGTCCCTGCA +
Preference number: 5 (lower is better)
Translates to: EGANGIGRGRSALTS*SVPYSASVCYSVPA
Trigger: TGCAGGGACTGAATAGCAAACTGAGGCTGAGTAGGGAACAGACCATGAGGTCAGTGCAGATCTTCCTCTCCCAATGCCGTTTGCTCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR CAA 90 bp GGGAGGCAGAGGGAGAGGCAGACAATTGCTTTGTTCCCTGGGATTCTGAGAAACCTACTCAGCCTCAGTTaGCTATTCAGTCCCTGCAAC +
Preference number: 5 (lower is better)
Translates to: GRQRERQTIALFPGILRNLLSLS*LFSPCN
Trigger: GTTGCAGGGACTGAATAGCAAACTGAGGCTGAGTAG...GTTTCTCAGAATCCCAGGGAACAAAGCAATTGTCTGCCTCTCCCTCTGCCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR CAA 90 bp GCAGAGGGAGAGGCAGACAATTGCTTTGTTCCCTGGGATTCTGAGAAACAAGACGGCAACAGAAGTCTCTaGGGCCACAAATGGAGGACG +
Preference number: 5 (lower is better)
Translates to: AEGEADNCFVPWDSEKQDGNRSL*GHKWRT
Trigger: CGTCCTCCATTTGTGGCCCAAGAGACTTCTGTTGCC...GTCTTGTTTCTCAGAATCCCAGGGAACAAAGCAATTGTCTGCCTCTCCCTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS GCA 90 bp GTCGGAACTAGTAGAAGGAGCAAACGGCATTGGGAGAGGAAGATCTaGACTGACCTCATGGTCTGTTCCCTACTCAGCCTCAGTTTGCTA +
Preference number: 5 (lower is better)
Translates to: VGTSRRSKRHWERKI*TDLMVCSLLSLSLL
Trigger: TAGCAAACTGAGGCTGAGTAGGGAACAGACCATGAGGTCAGTGCAGATCTTCCTCTCCCAATGCCGTTTGCTCCTTCTACTAGTTCCGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS GCA 90 bp TCACTAGGAGCCTCCATGGCATCAGGTCCAAAAATGCTTTGGCACTaGATATATCTGGATCTGCACCCCTTCCTGAAACAACGGCCTTCA +
Preference number: 5 (lower is better)
Translates to: SLGASMASGPKMLWH*IYLDLHPFLKQRPS
Trigger: TGAAGGCCGTTGTTTCAGGAAGGGGTGCAGATCCAGATATATGCAGTGCCAAAGCATTTTTGGACCTGATGCCATGGAGGCTCCTAGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS CCA 90 bp GACTTAAGGAGCATTGTCGGAACTAGTAGAAGGAGCAAACGGCATTaGGAGAGGAAGATCTGCACTGACCTCATGGTCTGTTCCCTACTC +
Preference number: 5 (lower is better)
Translates to: DLRSIVGTSRRSKRH*ERKICTDLMVCSLL
Trigger: GAGTAGGGAACAGACCATGAGGTCAGTGCAGATCTTCCTCTCCCAATGCCGTTTGCTCCTTCTACTAGTTCCGACAATGCTCCTTAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR CAA 90 bp TTATTGATCAGCATGGGTGCAGGTGCGGATGTTCACATGGATCAAGTTGAGGGAGGGAGAGGCAGACAATaGCTTTGTTCCCTGGGATTC +
Preference number: 5 (lower is better)
Translates to: LLISMGAGADVHMDQVEGGRGRQ*LCSLGF
Trigger: GAATCCCAGGGAACAAAGCAATTGTCTGCCTCTCCC...TCCCTCAACTTGATCCATGTGAACATCCGCACCTGCACCCATGCTGATCAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS TCA 90 bp CCTTCCTGCCTACACACGTATCCAGATGGACGAAACCGACAATCATaGCAGCAAAGTCCAATGCTACAGTTGGCACCTGGTTGCAACTTA +
Preference number: 5 (lower is better)
Translates to: PSCLHTYPDGRNRQS*QQSPMLQLAPGCNL
Trigger: TAAGTTGCAACCAGGTGCCAACTGTAGCATTGGACTTTGCTGTCATGATTGTCGGTTTCGTCCATCTGGATACGTGTGTAGGCAGGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS CCA 90 bp AGAGTCCAGAGACTCTTTCACGGAGCCCATGTAGTTGCAGTCCTTTaGTATGTAAGGATGATCCTCCAGCAGTTCCCCATGTTCTGTGAA +
Preference number: 5 (lower is better)
Translates to: RVQRLFHGAHVVAVL*YVRMILQQFPMFCE
Trigger: TTCACAGAACATGGGGAACTGCTGGAGGATCATCCTTACATACCAAAGGACTGCAACTACATGGGCTCCGTGAAAGAGTCTCTGGACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR CAA 90 bp TGTCGGCATTTATTGATCAGCATGGGTGCAGGTGCGGATGTTCACATGGATCAATGGAGGACGTGCTTCTaGCCTTTTAACTGCAGTAGG +
Preference number: 5 (lower is better)
Translates to: CRHLLISMGAGADVHMDQWRTCF*PFNCSR
Trigger: CCTACTGCAGTTAAAAGGCAAGAAGCACGTCCTCCA...TTGATCCATGTGAACATCCGCACCTGCACCCATGCTGATCAATAAATGCCGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR CAA 90 bp GGGAGGCAGAGGGAGAGGCAGACAATTGCTTTGTTCCCTGGGATTCTGAGAAACGTAGCCTGCCACATATaGAATTTGCACTTTCACACT +
Preference number: 5 (lower is better)
Translates to: GRQRERQTIALFPGILRNVACHI*NLHFHT
Trigger: AGTGTGAAAGTGCAAATTCAATATGTGGCAGGCTAC...GTTTCTCAGAATCCCAGGGAACAAAGCAATTGTCTGCCTCTCCCTCTGCCTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS TCA 90 bp GATGCAATTAAGCCTACCCCTACATTGGCAGTATTGTTCATCATGTaGCATTCCTACAGCATGACCCAGCTCATGAGCAGACCAGGTAGC +
Preference number: 5 (lower is better)
Translates to: DAIKPTPTLAVLFIM*HSYSMTQLMSRPGS
Trigger: GCTACCTGGTCTGCTCATGAGCTGGGTCATGCTGTAGGAATGTCACATGATGAACAATACTGCCAATGTAGGGGTAGGCTTAATTGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR CAA 90 bp GGGAGGCAGAGGGAGAGGCAGACAATTGCTTTGTTCCCTGGGATTCTGAGAAACCCTCATACGAACATCTaGAAAGTAGGTGTCCATAAT +
Preference number: 5 (lower is better)
Translates to: GRQRERQTIALFPGILRNPHTNI*KVGVHN
Trigger: ATTATGGACACCTACTTTCAAGATGTTCGTATGAGG...GTTTCTCAGAATCCCAGGGAACAAAGCAATTGTCTGCCTCTCCCTCTGCCTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR CAA 90 bp TGTCGGCATTTATTGATCAGCATGGGTGCAGGTGCGGATGTTCACATGGATCAAAGTCCAATGCTACAGTaGGCACCTGGTTGCAACTTA +
Preference number: 5 (lower is better)
Translates to: CRHLLISMGAGADVHMDQSPMLQ*APGCNL
Trigger: TAAGTTGCAACCAGGTGCCAACTGTAGCATTGGACT...TTGATCCATGTGAACATCCGCACCTGCACCCATGCTGATCAATAAATGCCGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS TCA 90 bp GCAAAGTCCAATGCTACAGTTGGCACCTGGTTGCAACTTACAATTTaGTTGGCAACACCGATCTTTCTGACACTCCTCTGTGGAACCACA +
Preference number: 5 (lower is better)
Translates to: AKSNATVGTWLQLTI*LATPIFLTLLCGTT
Trigger: TGTGGTTCCACAGAGGAGTGTCAGAAAGATCGGTGTTGCCAATCAAATTGTAAGTTGCAACCAGGTGCCAACTGTAGCATTGGACTTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR CAA 90 bp GACAATTGCTTTGTTCCCTGGGATTCTGAGAAACAAGACTATACCTTGAATAGCCAACGGCCTTCATACTaGCAAGGGGTTCCATCCTGC +
Preference number: 5 (lower is better)
Translates to: DNCFVPWDSEKQDYTLNSQRPSY*QGVPSC
Trigger: GCAGGATGGAACCCCTTGCAAGTATGAAGGCCGTTG...GCTATTCAAGGTATAGTCTTGTTTCTCAGAATCCCAGGGAACAAAGCAATTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR CAA 90 bp CATTTATTGATCAGCATGGGTGCAGGTGCGGATGTTCACATGGATCAAGTTGAGAGGCAGACAATTGCTTaGTTCCCTGGGATTCTGAGA +
Preference number: 5 (lower is better)
Translates to: HLLISMGAGADVHMDQVERQTIA*FPGILR
Trigger: TCTCAGAATCCCAGGGAACAAAGCAATTGTCTGCCT...CTCAACTTGATCCATGTGAACATCCGCACCTGCACCCATGCTGATCAATAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS GCA 90 bp CGTATCCAGATGGACGAAACCGACAATCATGACAGCAAAGTCCAATaGTACAGTTGGCACCTGGTTGCAACTTACAATTTGATTGGCAAC +
Preference number: 5 (lower is better)
Translates to: RIQMDETDNHDSKVQ*YSWHLVATYNLIGN
Trigger: GTTGCCAATCAAATTGTAAGTTGCAACCAGGTGCCAACTGTAGCATTGGACTTTGCTGTCATGATTGTCGGTTTCGTCCATCTGGATACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR CAA 90 bp GCAGAGGGAGAGGCAGACAATTGCTTTGTTCCCTGGGATTCTGAGAAACAAGACCAGTCACATTCCTCATaGTCCTCCACAATTTTGTTT +
Preference number: 5 (lower is better)
Translates to: AEGEADNCFVPWDSEKQDQSHSS*SSTILF
Trigger: AAACAAAATTGTGGAGGACAATGAGGAATGTGACTG...GTCTTGTTTCTCAGAATCCCAGGGAACAAAGCAATTGTCTGCCTCTCCCTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR CAA 90 bp TTATTGATCAGCATGGGTGCAGGTGCGGATGTTCACATGGATCAAGTTGAGGGAGTGGTTTCCTATCACTaGCCGGAAAAACACAAAAAC +
Preference number: 5 (lower is better)
Translates to: LLISMGAGADVHMDQVEGVVSYH*PEKHKN
Trigger: GTTTTTGTGTTTTTCCGGCAAGTGATAGGAAACCAC...TCCCTCAACTTGATCCATGTGAACATCCGCACCTGCACCCATGCTGATCAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS TCA 90 bp TTCTCAGGAATGGTGACTTCATACGAGTCAAACTCCCCTTCAGGGTaGAAAATTACATCTTCGCCAAGAGACTTAAGGAGCATTGTCGGA +
Preference number: 5 (lower is better)
Translates to: FSGMVTSYESNSPSG*KITSSPRDLRSIVG
Trigger: TCCGACAATGCTCCTTAAGTCTCTTGGCGAAGATGTAATTTTTCACCCTGAAGGGGAGTTTGACTCGTATGAAGTCACCATTCCTGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS CCA 90 bp ATGGACGAAACCGACAATCATGACAGCAAAGTCCAATGCTACAGTTaGCACCTGGTTGCAACTTACAATTTGATTGGCAACACCGATCTT +
Preference number: 5 (lower is better)
Translates to: MDETDNHDSKVQCYS*HLVATYNLIGNTDL
Trigger: AAGATCGGTGTTGCCAATCAAATTGTAAGTTGCAACCAGGTGCCAACTGTAGCATTGGACTTTGCTGTCATGATTGTCGGTTTCGTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR CAA 90 bp AGTGAACACTCGAGAAGTAGAATGCACTGGTTTGTTTCCAAAACAAGAATGCTGCATTTGGGCAGGAACTaGAATTCCCGTCGCAGTACT +
Preference number: 5 (lower is better)
Translates to: SEHSRSRMHWFVSKTRMLHLGRN*NSRRST
Trigger: AGTACTGCGACGGGAATTCAAGTTCCTGCCCAAATG...CAGCATTCTTGTTTTGGAAACAAACCAGTGCATTCTACTTCTCGAGTGTTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR CAA 90 bp AACACTCGAGAAGTAGAATGCACTGGTTTGTTTCCAAAACAAGAATGCTGTTTATGGACACAACCCAAATaGACGAGGGAATCGCCCCTC +
Preference number: 5 (lower is better)
Translates to: NTREVECTGLFPKQECCLWTQPK*TRESPL
Trigger: GAGGGGCGATTCCCTCGTCAATTTGGGTTGTGTCCA...TAAACAGCATTCTTGTTTTGGAAACAAACCAGTGCATTCTACTTCTCGAGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR CAA 90 bp CATTTATTGATCAGCATGGGTGCAGGTGCGGATGTTCACATGGATCAAGTTGAGTTGACACTCTTTGCTTaGGGTCGTTTACTTTCAATG +
Preference number: 5 (lower is better)
Translates to: HLLISMGAGADVHMDQVELTLFA*GRLLSM
Trigger: CATTGAAAGTAAACGACCCAAAGCAAAGAGTGTCAA...CTCAACTTGATCCATGTGAACATCCGCACCTGCACCCATGCTGATCAATAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR CAA 90 bp TGTCGGCATTTATTGATCAGCATGGGTGCAGGTGCGGATGTTCACATGGATCAAAAGAATGCTGTTTATTaGCTGATCAAAACTTGTGGG +
Preference number: 5 (lower is better)
Translates to: CRHLLISMGAGADVHMDQKNAVY*LIKTCG
Trigger: CCCACAAGTTTTGATCAGCAAATAAACAGCATTCTT...TTGATCCATGTGAACATCCGCACCTGCACCCATGCTGATCAATAAATGCCGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR CAA 90 bp AACACTCGAGAAGTAGAATGCACTGGTTTGTTTCCAAAACAAGAATGCTGTTTATTCACATGGATCAAGTaGAGGGAGGCAGAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: NTREVECTGLFPKQECCLFTWIK*REAEGE
Trigger: CTCTCCCTCTGCCTCCCTCAACTTGATCCATGTGAA...TAAACAGCATTCTTGTTTTGGAAACAAACCAGTGCATTCTACTTCTCGAGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR CAA 90 bp AGTGAACACTCGAGAAGTAGAATGCACTGGTTTGTTTCCAAAACAAGAATGCTGTGTTGTCGGCATTTATaGATCAGCATGGGTGCAGGT +
Preference number: 5 (lower is better)
Translates to: SEHSRSRMHWFVSKTRMLCCRHL*ISMGAG
Trigger: ACCTGCACCCATGCTGATCAATAAATGCCGACAACA...CAGCATTCTTGTTTTGGAAACAAACCAGTGCATTCTACTTCTCGAGTGTTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR CAA 90 bp GACAATTGCTTTGTTCCCTGGGATTCTGAGAAACAAGACTATACCTTGAATAGCAAGCCTACCCCTACATaGGCAGTATTGTTCATCATG +
Preference number: 5 (lower is better)
Translates to: DNCFVPWDSEKQDYTLNSKPTPT*AVLFIM
Trigger: CATGATGAACAATACTGCCAATGTAGGGGTAGGCTT...GCTATTCAAGGTATAGTCTTGTTTCTCAGAATCCCAGGGAACAAAGCAATTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR CAA 90 bp GAAGTAGAATGCACTGGTTTGTTTCCAAAACAAGAATGCTGTTTATTTGCTGATCAAACACCCCGGGTATaGCATTTCTCAGGCAAACAG +
Preference number: 5 (lower is better)
Translates to: EVECTGLFPKQECCLFADQTPRV*HFSGKQ
Trigger: CTGTTTGCCTGAGAAATGCAATACCCGGGGTGTTTG...ATCAGCAAATAAACAGCATTCTTGTTTTGGAAACAAACCAGTGCATTCTACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR CAA 90 bp GACTATACCTTGAATAGCATGGTAATTCTAGGAAACTCACTACTTTCAGAGCTTCTTGAGGGGCTCAATTaGGTAATGTTTGGCATCAAT +
Preference number: 5 (lower is better)
Translates to: DYTLNSMVILGNSLLSELLEGLN*VMFGIN
Trigger: ATTGATGCCAAACATTACCAAATTGAGCCCCTCAAG...AAGCTCTGAAAGTAGTGAGTTTCCTAGAATTACCATGCTATTCAAGGTATAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR CAA 90 bp AACACTCGAGAAGTAGAATGCACTGGTTTGTTTCCAAAACAAGAATGCTGTTTACAGGGGCAAGGATATTaGTATCTAGTAAAGTACTCA +
Preference number: 5 (lower is better)
Translates to: NTREVECTGLFPKQECCLQGQGY*YLVKYS
Trigger: TGAGTACTTTACTAGATACAAATATCCTTGCCCCTG...TAAACAGCATTCTTGTTTTGGAAACAAACCAGTGCATTCTACTTCTCGAGTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR CAA 90 bp GACTATACCTTGAATAGCATGGTAATTCTAGGAAACTCACTACTTTCAGAGCTTTTGTCCTCCACAATTTaGTTTCCACATCTCTTAAGC +
Preference number: 5 (lower is better)
Translates to: DYTLNSMVILGNSLLSELLSSTI*FPHLLS
Trigger: GCTTAAGAGATGTGGAAACAAAATTGTGGAGGACAA...AAGCTCTGAAAGTAGTGAGTTTCCTAGAATTACCATGCTATTCAAGGTATAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS TCA 90 bp CACACTTTTCCAAACGACCATGCAAGAGCATCATTATATTTTCTTTaGAGATATAAATGTGCCCAATCTGATGACAGGCGAGCATTTAAT +
Preference number: 5 (lower is better)
Translates to: HTFPNDHARASLYFL*RYKCAQSDDRRAFN
Trigger: ATTAAATGCTCGCCTGTCATCAGATTGGGCACATTTATATCTTCAAAGAAAATATAATGATGCTCTTGCATGGTCGTTTGGAAAAGTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR CAA 90 bp GAAGTAGAATGCACTGGTTTGTTTCCAAAACAAGAATGCTGTTTATTTGCTGATTCAATTCCAAGTACTTaGGGTGTTTATAGGATCCAG +
Preference number: 5 (lower is better)
Translates to: EVECTGLFPKQECCLFADSIPST*GVYRIQ
Trigger: CTGGATCCTATAAACACCCAAAGTACTTGGAATTGA...ATCAGCAAATAAACAGCATTCTTGTTTTGGAAACAAACCAGTGCATTCTACTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS-3UTR CAA 90 bp GAAGTAGAATGCACTGGTTTGTTTCCAAAACAAGAATGCTGTTTATTTGCTGATGGCATCATGTATGACTaGAGAAAGATTGTTGTTCAC +
Preference number: 5 (lower is better)
Translates to: EVECTGLFPKQECCLFADGIMYD*RKIVVH
Trigger: GTGAACAACAATCTTTCTCAAGTCATACATGATGCC...ATCAGCAAATAAACAGCATTCTTGTTTTGGAAACAAACCAGTGCATTCTACTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS CCA 72 bp CAGTCCCTGCAACTCTGGCCTCGCGAGTCAGATTTCTaGGGGCCGCCGCTAGAGGCGCCTGAGCTCAAAACC +
Preference number: 6 (lower is better)
Translates to: QSLQLWPRESDF*GPPLEAPELKT
Trigger: GGTTTTGAGCTCAGGCGCCTCTAGCGGCGGCCCCCAGAAATCTGACTCGCGAGGCCAGAGTTGCAGGGACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS CCA 72 bp ACTCAGCCTCAGTTTGCTATTCAGTCCCTGCAACTCTaGCCTCGCGAGTCAGATTTCTGGGGGCCGCCGCTA +
Preference number: 6 (lower is better)
Translates to: TQPQFAIQSLQL*PRESDFWGPPL
Trigger: TAGCGGCGGCCCCCAGAAATCTGACTCGCGAGGCCAGAGTTGCAGGGACTGAATAGCAAACTGAGGCTGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS TCA 72 bp TGGACACAACCCAAATTGACGAGGGAATCGCCCCTCTaGGCAGTCCTGGAGGCCCACTGTCAATGCTTCCTC +
Preference number: 6 (lower is better)
Translates to: WTQPKLTRESPL*AVLEAHCQCFL
Trigger: GAGGAAGCATTGACAGTGGGCCTCCAGGACTGCTCAGAGGGGCGATTCCCTCGTCAATTTGGGTTGTGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS GCA 72 bp CTGACCTCATGGTCTGTTCCCTACTCAGCCTCAGTTTaGTATTCAGTCCCTGCAACTCTGGCCTCGCGAGTC +
Preference number: 6 (lower is better)
Translates to: LTSWSVPYSASV*YSVPATLASRV
Trigger: GACTCGCGAGGCCAGAGTTGCAGGGACTGAATAGCAAACTGAGGCTGAGTAGGGAACAGACCATGAGGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS TCA 72 bp GCACCTCTCCCCGGAAGCTCAGCTTCTCAGGAATGGTaGCTTCATACGAGTCAAACTCCCCTTCAGGGTGAA +
Preference number: 6 (lower is better)
Translates to: APLPGSSASQEW*LHTSQTPLQGE
Trigger: TTCACCCTGAAGGGGAGTTTGACTCGTATGAAGTCACCATTCCTGAGAAGCTGAGCTTCCGGGGAGAGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS CAA 72 bp ACTGACCTCATGGTCTGTTCCCTACTCAGCCTCAGTTaGCTATTCAGTCCCTGCAACTCTGGCCTCGCGAGT +
Preference number: 6 (lower is better)
Translates to: TDLMVCSLLSLS*LFSPCNSGLAS
Trigger: ACTCGCGAGGCCAGAGTTGCAGGGACTGAATAGCAAACTGAGGCTGAGTAGGGAACAGACCATGAGGTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS CAA 72 bp GAGAAAACGCGCAGATGTCGGGGCAACAGAAGTCTCTaGGGCCACAAATGGAGGACGTGCTTCTTGCCTTTT +
Preference number: 6 (lower is better)
Translates to: EKTRRCRGNRSL*GHKWRTCFLPF
Trigger: AAAAGGCAAGAAGCACGTCCTCCATTTGTGGCCCAAGAGACTTCTGTTGCCCCGACATCTGCGCGTTTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS CAA 90 bp AAGATCTGCACTGACCTCATGGTCTGTTCCCTACTCAGCCTCAGTTaGCTATTCAGTCCCTGCAACTCTGGCCTCGCGAGTCAGATTTCT +
Preference number: 6 (lower is better)
Translates to: KICTDLMVCSLLSLS*LFSPCNSGLASQIS
Trigger: AGAAATCTGACTCGCGAGGCCAGAGTTGCAGGGACTGAATAGCAAACTGAGGCTGAGTAGGGAACAGACCATGAGGTCAGTGCAGATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS TCA 72 bp AAGGAGCAAACGGCATTGGGAGAGGAAGATCTGCACTaGCCTCATGGTCTGTTCCCTACTCAGCCTCAGTTT +
Preference number: 6 (lower is better)
Translates to: KEQTALGEEDLH*PHGLFPTQPQF
Trigger: AAACTGAGGCTGAGTAGGGAACAGACCATGAGGTCAGTGCAGATCTTCCTCTCCCAATGCCGTTTGCTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS CCA 72 bp AGATGTCGGGGCAACAGAAGTCTCTTGGGCCACAAATaGAGGACGTGCTTCTTGCCTTTTAACTGCAGTAGG +
Preference number: 6 (lower is better)
Translates to: RCRGNRSLLGHK*RTCFLPFNCSR
Trigger: CCTACTGCAGTTAAAAGGCAAGAAGCACGTCCTCCATTTGTGGCCCAAGAGACTTCTGTTGCCCCGACATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS CCA 72 bp CTAGGAGCCTCCATGGCATCAGGTCCAAAAATGCTTTaGCACTGCATATATCTGGATCTGCACCCCTTCCTG +
Preference number: 6 (lower is better)
Translates to: LGASMASGPKML*HCIYLDLHPFL
Trigger: CAGGAAGGGGTGCAGATCCAGATATATGCAGTGCCAAAGCATTTTTGGACCTGATGCCATGGAGGCTCCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS TCA 72 bp AATAAGGCGAAACATTATGATGGACACAACCCAAATTaGCGAGGGAATCGCCCCTCTGAGCAGTCCTGGAGG +
Preference number: 6 (lower is better)
Translates to: NKAKHYDGHNPN*RGNRPSEQSWR
Trigger: CCTCCAGGACTGCTCAGAGGGGCGATTCCCTCGTCAATTTGGGTTGTGTCCATCATAATGTTTCGCCTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS CCA 72 bp AACGGCATTGGGAGAGGAAGATCTGCACTGACCTCATaGTCTGTTCCCTACTCAGCCTCAGTTTGCTATTCA +
Preference number: 6 (lower is better)
Translates to: NGIGRGRSALTS*SVPYSASVCYS
Trigger: TGAATAGCAAACTGAGGCTGAGTAGGGAACAGACCATGAGGTCAGTGCAGATCTTCCTCTCCCAATGCCGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS CAA 72 bp GAGACTCTTTCACGGAGCCCATGTAGTTGCAGTCCTTaGGTATGTAAGGATGATCCTCCAGCAGTTCCCCAT +
Preference number: 6 (lower is better)
Translates to: ETLSRSPCSCSP*VCKDDPPAVPH
Trigger: ATGGGGAACTGCTGGAGGATCATCCTTACATACCAAAGGACTGCAACTACATGGGCTCCGTGAAAGAGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS TCA 72 bp CTACACACGTATCCAGATGGACGAAACCGACAATCATaGCAGCAAAGTCCAATGCTACAGTTGGCACCTGGT +
Preference number: 6 (lower is better)
Translates to: LHTYPDGRNRQS*QQSPMLQLAPG
Trigger: ACCAGGTGCCAACTGTAGCATTGGACTTTGCTGTCATGATTGTCGGTTTCGTCCATCTGGATACGTGTGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS TCA 72 bp TTTGGCACTGCATATATCTGGATCTGCACCCCTTCCTaGAACAACGGCCTTCATACTTGCAAGGGGTTCCAT +
Preference number: 6 (lower is better)
Translates to: FGTAYIWICTPS*NNGLHTCKGFH
Trigger: ATGGAACCCCTTGCAAGTATGAAGGCCGTTGTTTCAGGAAGGGGTGCAGATCCAGATATATGCAGTGCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS GCA 72 bp GCCTCCATGGCATCAGGTCCAAAAATGCTTTGGCACTaGATATATCTGGATCTGCACCCCTTCCTGAAACAA +
Preference number: 6 (lower is better)
Translates to: ASMASGPKMLWH*IYLDLHPFLKQ
Trigger: TTGTTTCAGGAAGGGGTGCAGATCCAGATATATGCAGTGCCAAAGCATTTTTGGACCTGATGCCATGGAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS CAA 90 bp ATAGACGACATGTTCAAAACTGGGAGAGGCCTTGAGGGGCTCAATTaGGTAATGTTTGGCATCAATGTTAAATACACCTCGGAGACCCCC +
Preference number: 6 (lower is better)
Translates to: IDDMFKTGRGLEGLN*VMFGINVKYTSETP
Trigger: GGGGGTCTCCGAGGTGTATTTAACATTGATGCCAAACATTACCAAATTGAGCCCCTCAAGGCCTCTCCCAGTTTTGAACATGTCGTCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS CAA 90 bp AGCAAAGTCCAATGCTACAGTTGGCACCTGGTTGCAACTTACAATTaGATTGGCAACACCGATCTTTCTGACACTCCTCTGTGGAACCAC +
Preference number: 6 (lower is better)
Translates to: SKVQCYSWHLVATYN*IGNTDLSDTPLWNH
Trigger: GTGGTTCCACAGAGGAGTGTCAGAAAGATCGGTGTTGCCAATCAAATTGTAAGTTGCAACCAGGTGCCAACTGTAGCATTGGACTTTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS TCA 72 bp AGAGATATAACTGCAATTGCTAAACCCAGTGCGTCCTaGGCCCATGATGCAATTAAGCCTACCCCTACATTG +
Preference number: 6 (lower is better)
Translates to: RDITAIAKPSAS*AHDAIKPTPTL
Trigger: CAATGTAGGGGTAGGCTTAATTGCATCATGGGCTCAGGACGCACTGGGTTTAGCAATTGCAGTTATATCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS CCA 72 bp CCTGAGCCCATGATGCAATTAAGCCTACCCCTACATTaGCAGTATTGTTCATCATGTGACATTCCTACAGCA +
Preference number: 6 (lower is better)
Translates to: PEPMMQLSLPLH*QYCSSCDIPTA
Trigger: TGCTGTAGGAATGTCACATGATGAACAATACTGCCAATGTAGGGGTAGGCTTAATTGCATCATGGGCTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS CAA 72 bp CAATGCTACAGTTGGCACCTGGTTGCAACTTACAATTaGATTGGCAACACCGATCTTTCTGACACTCCTCTG +
Preference number: 6 (lower is better)
Translates to: QCYSWHLVATYN*IGNTDLSDTPL
Trigger: CAGAGGAGTGTCAGAAAGATCGGTGTTGCCAATCAAATTGTAAGTTGCAACCAGGTGCCAACTGTAGCATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS TCA 72 bp ATGGTGACTTCATACGAGTCAAACTCCCCTTCAGGGTaGAAAATTACATCTTCGCCAAGAGACTTAAGGAGC +
Preference number: 6 (lower is better)
Translates to: MVTSYESNSPSG*KITSSPRDLRS
Trigger: GCTCCTTAAGTCTCTTGGCGAAGATGTAATTTTTCACCCTGAAGGGGAGTTTGACTCGTATGAAGTCACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS TCA 72 bp AATGCTACAGTTGGCACCTGGTTGCAACTTACAATTTaGTTGGCAACACCGATCTTTCTGACACTCCTCTGT +
Preference number: 6 (lower is better)
Translates to: NATVGTWLQLTI*LATPIFLTLLC
Trigger: ACAGAGGAGTGTCAGAAAGATCGGTGTTGCCAATCAAATTGTAAGTTGCAACCAGGTGCCAACTGTAGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS GCA 72 bp ATGGACGAAACCGACAATCATGACAGCAAAGTCCAATaGTACAGTTGGCACCTGGTTGCAACTTACAATTTG +
Preference number: 6 (lower is better)
Translates to: MDETDNHDSKVQ*YSWHLVATYNL
Trigger: CAAATTGTAAGTTGCAACCAGGTGCCAACTGTAGCATTGGACTTTGCTGTCATGATTGTCGGTTTCGTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS CCA 72 bp ACCGACAATCATGACAGCAAAGTCCAATGCTACAGTTaGCACCTGGTTGCAACTTACAATTTGATTGGCAAC +
Preference number: 6 (lower is better)
Translates to: TDNHDSKVQCYS*HLVATYNLIGN
Trigger: GTTGCCAATCAAATTGTAAGTTGCAACCAGGTGCCAACTGTAGCATTGGACTTTGCTGTCATGATTGTCGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS CAA 90 bp ACCTATACCTACTTTGATCAAAGAGTAGGATCAATTCCAAGTACTTaGGGTGTTTATAGGATCCAGGAAAGTCCCTTAGCCTCGCCTTAT +
Preference number: 6 (lower is better)
Translates to: TYTYFDQRVGSIPST*GVYRIQESPLASPY
Trigger: ATAAGGCGAGGCTAAGGGACTTTCCTGGATCCTATAAACACCCAAAGTACTTGGAATTGATCCTACTCTTTGATCAAAGTAGGTATAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS CAA 72 bp TACTTTGATCAAAGAGTAGGATCAATTCCAAGTACTTaGGGTGTTTATAGGATCCAGGAAAGTCCCTTAGCC +
Preference number: 6 (lower is better)
Translates to: YFDQRVGSIPST*GVYRIQESPLA
Trigger: GGCTAAGGGACTTTCCTGGATCCTATAAACACCCAAAGTACTTGGAATTGATCCTACTCTTTGATCAAAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS CAA 90 bp AATCTGCCTAAAACTTCAGCTAACTCTGGATATCCAACGCGTATTTaGTTAAAATCTGTCCATACTTCAAGAGCCTTTAAGTGTATCCTC +
Preference number: 6 (lower is better)
Translates to: NLPKTSANSGYPTRI*LKSVHTSRAFKCIL
Trigger: GAGGATACACTTAAAGGCTCTTGAAGTATGGACAGATTTTAACAAAATACGCGTTGGATATCCAGAGTTAGCTGAAGTTTTAGGCAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS CAA 90 bp GTAGGTGTCCATAATCCCAGTCAAAAGAATGGCATCATGTATGACTaGAGAAAGATTGTTGTTCACAAACCTATACCTACTTTGATCAAA +
Preference number: 6 (lower is better)
Translates to: VGVHNPSQKNGIMYD*RKIVVHKPIPTLIK
Trigger: TTTGATCAAAGTAGGTATAGGTTTGTGAACAACAATCTTTCTCAAGTCATACATGATGCCATTCTTTTGACTGGGATTATGGACACCTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS CAA 72 bp CATAATCCCAGTCAAAAGAATGGCATCATGTATGACTaGAGAAAGATTGTTGTTCACAAACCTATACCTACT +
Preference number: 6 (lower is better)
Translates to: HNPSQKNGIMYD*RKIVVHKPIPT
Trigger: AGTAGGTATAGGTTTGTGAACAACAATCTTTCTCAAGTCATACATGATGCCATTCTTTTGACTGGGATTATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369400.2
CDS CAA 72 bp AAAACTTCAGCTAACTCTGGATATCCAACGCGTATTTaGTTAAAATCTGTCCATACTTCAAGAGCCTTTAAG +
Preference number: 6 (lower is better)
Translates to: KTSANSGYPTRI*LKSVHTSRAFK
Trigger: CTTAAAGGCTCTTGAAGTATGGACAGATTTTAACAAAATACGCGTTGGATATCCAGAGTTAGCTGAAGTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369400.2