RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADAM22 (Homo sapiens)

Ensembl gene IDs: ENSG00000008277

Ensembl transcript IDs: ENST00000265727.11, ENST00000398201.8, ENST00000398203.8, ENST00000398204.8, ENST00000398209.7, ENST00000412441.5, ENST00000413139.2, ENST00000426930.5, ENST00000439864.5, ENST00000476330.1, ENST00000478920.1, ENST00000682337.1, ENST00000683525.1, ENST00000684002.1

Found 783 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATGTGGGCATCCAGTGGCAGCAGCCAGATGTGTCCTATCAGACTGTaGAGGCAGCTGTCTTGTCCCTCCTCGCTCCTGCCAGTTCCTAAC +
Preference number: 1 (lower is better)
Translates to: MWASSGSSQMCPIRL*RQLSCPSSLLPVPN
Trigger: GTTAGGAACTGGCAGGAGCGAGGAGGGACAAGACAGCTGCCTGCACAGTCTGATAGGACACATCTGGCTGCTGCCACTGGATGCCCACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR CCA 90 bp GAGCAGCCCATCGGCAGCAGAGTGGGCTCCTGCATCAGCAAACTGTaGAGGCCAGAAGTTTTGCTGGGCATTTTGTTCTCTCACTCAACT +
Preference number: 1 (lower is better)
Translates to: EQPIGSRVGSCISKL*RPEVLLGILFSHST
Trigger: AGTTGAGTGAGAGAACAAAATGCCCAGCAAAACTTCTGGCCTCCACAGTTTGCTGATGCAGGAGCCCACTCTGCTGCCGATGGGCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR GCA 90 bp AGCCCTCACCATGTTGCACTGTCCGATGTATTCCTTTCCACAGATTaGATGTGCCCTGGGGATCATTTCCAGCCTGCAGCGTTCAGAGGA +
Preference number: 1 (lower is better)
Translates to: SPHHVALSDVFLSTD*MCPGDHFQPAAFRG
Trigger: TCCTCTGAACGCTGCAGGCTGGAAATGATCCCCAGGGCACATGCAATCTGTGGAAAGGAATACATCGGACAGTGCAACATGGTGAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR CCA 90 bp GCAGGCAGCTGTCTTGTCCCTCCTCGCTCCTGCCAGTTCCTAACTTaGCTCTCCCCTTCCATATACTCTACAAGCTACTCAATATCCTGC +
Preference number: 1 (lower is better)
Translates to: AGSCLVPPRSCQFLT*LSPSIYSTSYSISC
Trigger: GCAGGATATTGAGTAGCTTGTAGAGTATATGGAAGGGGAGAGCCAAGTTAGGAACTGGCAGGAGCGAGGAGGGACAAGACAGCTGCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR GCA 90 bp ATTCATGCCAACTTACCAACTGGTAGGGTGATATTTACAACACGCTaGCCATGTGGGCATCCAGTGGCAGCAGCCAGATGTGTCCTATCA +
Preference number: 1 (lower is better)
Translates to: IHANLPTGRVIFTTR*PCGHPVAAARCVLS
Trigger: TGATAGGACACATCTGGCTGCTGCCACTGGATGCCCACATGGGCAGCGTGTTGTAAATATCACCCTACCAGTTGGTAAGTTGGCATGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR CCA 90 bp TGGCTTGAGCTATGTGGCAACACTGCCCAACACTCACCCAAACCTTaGCCTGATGGATCGCTTTATGGTCATATCAACAATCACATCCCT +
Preference number: 1 (lower is better)
Translates to: WLELCGNTAQHSPKP*PDGSLYGHINNHIP
Trigger: AGGGATGTGATTGTTGATATGACCATAAAGCGATCCATCAGGCCAAGGTTTGGGTGAGTGTTGGGCAGTGTTGCCACATAGCTCAAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR CCA 90 bp TGCAACAGGGATGCATCAGGCAGGAGTGACTGGCCTATTATGGACTaGACCACAAAGTATTCAGAGTCAACACTCAGTCAATCTGCCAAG +
Preference number: 1 (lower is better)
Translates to: CNRDASGRSDWPIMD*TTKYSESTLSQSAK
Trigger: CTTGGCAGATTGACTGAGTGTTGACTCTGAATACTTTGTGGTCCAGTCCATAATAGGCCAGTCACTCCTGCCTGATGCATCCCTGTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR TCA 90 bp TTATTTGCTACATCTTTCAATCTGTCTGCCCTTCTGTTCTTGGCTTaGGCTATGTGGCAACACTGCCCAACACTCACCCAAACCTTGGCC +
Preference number: 1 (lower is better)
Translates to: LFATSFNLSALLFLA*AMWQHCPTLTQTLA
Trigger: GGCCAAGGTTTGGGTGAGTGTTGGGCAGTGTTGCCACATAGCTCAAGCCAAGAACAGAAGGGCAGACAGATTGAAAGATGTAGCAAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR TCA 90 bp CAAGTGTTTCATGGAAAATTCATGCCAACTTACCAACTGGTAGGGTaGTATTTACAACACGCTGCCCATGTGGGCATCCAGTGGCAGCAG +
Preference number: 1 (lower is better)
Translates to: QVFHGKFMPTYQLVG*YLQHAAHVGIQWQQ
Trigger: CTGCTGCCACTGGATGCCCACATGGGCAGCGTGTTGTAAATATCACCCTACCAGTTGGTAAGTTGGCATGAATTTTCCATGAAACACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR GCA 90 bp TATGGACTGGACCACAAAGTATTCAGAGTCAACACTCAGTCAATCTaGCAAGCACAGAAGTCTGTCTTAGGCATCCAGCACCTCTCTTCC +
Preference number: 1 (lower is better)
Translates to: YGLDHKVFRVNTQSI*QAQKSVLGIQHLSS
Trigger: GGAAGAGAGGTGCTGGATGCCTAAGACAGACTTCTGTGCTTGGCAGATTGACTGAGTGTTGACTCTGAATACTTTGTGGTCCAGTCCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR CCA 90 bp AACAGTGCAACAGGGATGCATCAGGCAGGAGTGACTGGCCTATTATaGACTGGACCACAAAGTATTCAGAGTCAACACTCAGTCAATCTG +
Preference number: 1 (lower is better)
Translates to: NSATGMHQAGVTGLL*TGPQSIQSQHSVNL
Trigger: CAGATTGACTGAGTGTTGACTCTGAATACTTTGTGGTCCAGTCCATAATAGGCCAGTCACTCCTGCCTGATGCATCCCTGTTGCACTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR CCA 90 bp CTGGGATGGGCTGCTGCCGCTCAGCCAATTTTCACAAGAGCAGACTaGGCCCCTCATTATATTATACTATCAATGGGAAACTGTTTATCA +
Preference number: 1 (lower is better)
Translates to: LGWAAAAQPIFTRAD*APHYIILSMGNCLS
Trigger: TGATAAACAGTTTCCCATTGATAGTATAATATAATGAGGGGCCCAGTCTGCTCTTGTGAAAATTGGCTGAGCGGCAGCAGCCCATCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR CCA 90 bp AGGTTTTATGAACAGTGCAACAGGGATGCATCAGGCAGGAGTGACTaGCCTATTATGGACTGGACCACAAAGTATTCAGAGTCAACACTC +
Preference number: 1 (lower is better)
Translates to: RFYEQCNRDASGRSD*PIMDWTTKYSESTL
Trigger: GAGTGTTGACTCTGAATACTTTGTGGTCCAGTCCATAATAGGCCAGTCACTCCTGCCTGATGCATCCCTGTTGCACTGTTCATAAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR CCA 90 bp TCACTTTATTTGCTACATCTTTCAATCTGTCTGCCCTTCTGTTCTTaGCTTGAGCTATGTGGCAACACTGCCCAACACTCACCCAAACCT +
Preference number: 1 (lower is better)
Translates to: SLYLLHLSICLPFCS*LELCGNTAQHSPKP
Trigger: AGGTTTGGGTGAGTGTTGGGCAGTGTTGCCACATAGCTCAAGCCAAGAACAGAAGGGCAGACAGATTGAAAGATGTAGCAAATAAAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR TCA 90 bp GAGAGACTTAAATGTTCCTTTAAATCAGGGTTTACTGCACTGCAATaGCTATGGATAAATGGAACTTCTCAGGCAGCAGGGTGCCAATCT +
Preference number: 1 (lower is better)
Translates to: ERLKCSFKSGFTALQ*LWINGTSQAAGCQS
Trigger: AGATTGGCACCCTGCTGCCTGAGAAGTTCCATTTATCCATAGTCATTGCAGTGCAGTAAACCCTGATTTAAAGGAACATTTAAGTCTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR GCA 90 bp ATCTTGGTAAAAAGTCACTTTATTTGCTACATCTTTCAATCTGTCTaGCCTTCTGTTCTTGGCTTGAGCTATGTGGCAACACTGCCCAAC +
Preference number: 1 (lower is better)
Translates to: ILVKSHFICYIFQSV*PSVLGLSYVATLPN
Trigger: GTTGGGCAGTGTTGCCACATAGCTCAAGCCAAGAACAGAAGGGCAGACAGATTGAAAGATGTAGCAAATAAAGTGACTTTTTACCAAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR TCA 90 bp AGCATTACTGTTTACAGTGAGGATGTGCCTCAGAACGTCAAGTTCTaGATCCACTATTGTACCTTAGGAAACTTGCTACATTTGGGTCAT +
Preference number: 1 (lower is better)
Translates to: SITVYSEDVPQNVKF*IHYCTLGNLLHLGH
Trigger: ATGACCCAAATGTAGCAAGTTTCCTAAGGTACAATAGTGGATTCAGAACTTGACGTTCTGAGGCACATCCTCACTGTAAACAGTAATGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR CCA 90 bp GATGCTGCATCTCTGTGGTTTAGATCTAACTTAACCCTTTATGAATaGTTGAAGCTGCTCAACTCAAACAGTAGAATCTTCCGTCATCTT +
Preference number: 1 (lower is better)
Translates to: DAASLWFRSNLTLYE*LKLLNSNSRIFRHL
Trigger: AAGATGACGGAAGATTCTACTGTTTGAGTTGAGCAGCTTCAACCATTCATAAAGGGTTAAGTTAGATCTAAACCACAGAGATGCAGCATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR GCA 90 bp ATACTATCAATGGGAAACTGTTTATCAAAGTCCTTAGTTCTTCCATaGCAGGAGAAAAGTTGCTGCATCCAAAACCAGAGTAGTCTTATC +
Preference number: 1 (lower is better)
Translates to: ILSMGNCLSKSLVLP*QEKSCCIQNQSSLI
Trigger: GATAAGACTACTCTGGTTTTGGATGCAGCAACTTTTCTCCTGGCATGGAAGAACTAAGGACTTTGATAAACAGTTTCCCATTGATAGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR GCA 90 bp AGCTTTAAAGTCCTGCAGAAAAATCCTATATGCCTTAGCCCTGCATaGTCATTTCTATTATGGGATGTTGTTTCCTTAAATATGGAAAAC +
Preference number: 1 (lower is better)
Translates to: SFKVLQKNPICLSPA*SFLLWDVVSLNMEN
Trigger: GTTTTCCATATTTAAGGAAACAACATCCCATAATAGAAATGAGCATGCAGGGCTAAGGCATATAGGATTTTTCTGCAGGACTTTAAAGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR CCA 90 bp GCACAGGTTAAAGGGATATCACATGTTTTGGACAAATACGAATTATaGAGAGACACATTTACAGCATTGACCACTATATTTACATTACCT +
Preference number: 1 (lower is better)
Translates to: AQVKGISHVLDKYEL*RDTFTALTTIFTLP
Trigger: AGGTAATGTAAATATAGTGGTCAATGCTGTAAATGTGTCTCTCCATAATTCGTATTTGTCCAAAACATGTGATATCCCTTTAACCTGTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR GCA 90 bp CCATGTGGGCATCCAGTGGCAGCAGCCAGATGTGTCCTATCAGACTGTGCAGGCTCTCAGGCAGCAGGGTaGCAATCTGTAGTCTTATCA +
Preference number: 2 (lower is better)
Translates to: PCGHPVAAARCVLSDCAGSQAAG*QSVVLS
Trigger: TGATAAGACTACAGATTGGCACCCTGCTGCCTGAGA...GCCTGCACAGTCTGATAGGACACATCTGGCTGCTGCCACTGGATGCCCACATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR GCA 90 bp CCATGTGGGCATCCAGTGGCAGCAGCCAGATGTGTCCTATCAGACTGTGCAGGCAAGCCCTCACCATGTTaGACTGTCCGATGTATTCCT +
Preference number: 2 (lower is better)
Translates to: PCGHPVAAARCVLSDCAGKPSPC*TVRCIP
Trigger: AGGAATACATCGGACAGTGCAACATGGTGAGGGCTT...GCCTGCACAGTCTGATAGGACACATCTGGCTGCTGCCACTGGATGCCCACATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR CAA 90 bp AAGCCCTCACCATGTTGCACTGTCCGATGTATTCCTTTCCACAGATaGCATGTGCCCTGGGGATCATTTCCAGCCTGCAGCGTTCAGAGG +
Preference number: 2 (lower is better)
Translates to: KPSPCCTVRCIPFHR*HVPWGSFPACSVQR
Trigger: CCTCTGAACGCTGCAGGCTGGAAATGATCCCCAGGGCACATGCAATCTGTGGAAAGGAATACATCGGACAGTGCAACATGGTGAGGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR CAA 90 bp TGCAGGCAGCTGTCTTGTCCCTCCTCGCTCCTGCCAGTTCCTAACTaGGCTCTCCCCTTCCATATACTCTACAAGCTACTCAATATCCTG +
Preference number: 2 (lower is better)
Translates to: CRQLSCPSSLLPVPN*ALPFHILYKLLNIL
Trigger: CAGGATATTGAGTAGCTTGTAGAGTATATGGAAGGGGAGAGCCAAGTTAGGAACTGGCAGGAGCGAGGAGGGACAAGACAGCTGCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR TCA 90 bp TCAATCTGTCTGCCCTTCTGTTCTTGGCTTGAGCTATGTGGCAACACTGCCCAAGACGGATGGGATAGATaGTTTCCAGGGAGCAGCCCA +
Preference number: 2 (lower is better)
Translates to: SICLPFCSWLELCGNTAQDGWDR*FPGSSP
Trigger: TGGGCTGCTCCCTGGAAATCATCTATCCCATCCGTC...TTGGGCAGTGTTGCCACATAGCTCAAGCCAAGAACAGAAGGGCAGACAGATTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR GCA 90 bp AAGTCCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTAGCAGAGTGGGCTCCTaGATCAGCAAACTGTGGAGG +
Preference number: 2 (lower is better)
Translates to: KSCCIFVLHPQMWEKSSSSRVGS*ISKLWR
Trigger: CCTCCACAGTTTGCTGATGCAGGAGCCCACTCTGCT...AGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR GCA 90 bp AAGTCCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTACAGCTGGGATGGGCTaGTGCCGCTCAGCCAATTTT +
Preference number: 2 (lower is better)
Translates to: KSCCIFVLHPQMWEKSSSTAGMG*CRSANF
Trigger: AAAATTGGCTGAGCGGCAGCAGCCCATCCCAGCTGT...AGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR CCA 90 bp CCATGTGGGCATCCAGTGGCAGCAGCCAGATGTGTCCTATCAGACTGTGCAGGCAAAGGGTTAGAGTATTaGCAAACCAGAAGCTACCAG +
Preference number: 2 (lower is better)
Translates to: PCGHPVAAARCVLSDCAGKGLEY*QTRSYQ
Trigger: CTGGTAGCTTCTGGTTTGCCAATACTCTAACCCTTT...GCCTGCACAGTCTGATAGGACACATCTGGCTGCTGCCACTGGATGCCCACATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR TCA 90 bp GAAAGCCCTCACCATGTTGCACTGTCCGATGTATTCCTTTCCACAGATTGCATGGACGGATGGGATAGATaGTTTCCAGGGAGCAGCCCA +
Preference number: 2 (lower is better)
Translates to: ESPHHVALSDVFLSTDCMDGWDR*FPGSSP
Trigger: TGGGCTGCTCCCTGGAAATCATCTATCCCATCCGTC...CATGCAATCTGTGGAAAGGAATACATCGGACAGTGCAACATGGTGAGGGCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR TCA 90 bp AAGTCCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTAGCAGACCATGTGATTaGGCCCATCAATCTCCAGCC +
Preference number: 2 (lower is better)
Translates to: KSCCIFVLHPQMWEKSSSSRPCD*AHQSPA
Trigger: GGCTGGAGATTGATGGGCTCAATCACATGGTCTGCT...AGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR CCA 90 bp CCATGTGGGCATCCAGTGGCAGCAGCCAGATGTGTCCTATCAGACTGTGCAGGCTGTCTCATGTGTCTTTaGTGCACTTGCTTAATCTCA +
Preference number: 2 (lower is better)
Translates to: PCGHPVAAARCVLSDCAGCLMCL*CTCLIS
Trigger: TGAGATTAAGCAAGTGCACCAAAGACACATGAGACA...GCCTGCACAGTCTGATAGGACACATCTGGCTGCTGCCACTGGATGCCCACATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR TCA 90 bp TCAATCTGTCTGCCCTTCTGTTCTTGGCTTGAGCTATGTGGCAACACTGCCCAAACCCAAACCTTGGCCTaGTGGATCGCTTTATGGTCA +
Preference number: 2 (lower is better)
Translates to: SICLPFCSWLELCGNTAQTQTLA*WIALWS
Trigger: TGACCATAAAGCGATCCATCAGGCCAAGGTTTGGGT...TTGGGCAGTGTTGCCACATAGCTCAAGCCAAGAACAGAAGGGCAGACAGATTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR TCA 90 bp AAGTCCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTGCAACCACAGCAAATTaGAAGCCCTCACCATGTTGC +
Preference number: 2 (lower is better)
Translates to: KSCCIFVLHPQMWEKSSSATTAN*KPSPCC
Trigger: GCAACATGGTGAGGGCTTTCAATTTGCTGTGGTTGC...AGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR TCA 90 bp CCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTTGGATACCAACTGGTAGGGTaGTATTTACAACACGCTGCC +
Preference number: 2 (lower is better)
Translates to: PAASLFCIRRCGRKAPLGYQLVG*YLQHAA
Trigger: GGCAGCGTGTTGTAAATATCACCCTACCAGTTGGTA...TCCAAGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR GCA 90 bp AAGTCCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTTCCACAGATTGCATGTaGCCTGGGGATCATTTCCAG +
Preference number: 2 (lower is better)
Translates to: KSCCIFVLHPQMWEKSSSSTDCM*PGDHFQ
Trigger: CTGGAAATGATCCCCAGGGCACATGCAATCTGTGGA...AGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR TCA 90 bp CCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTTGGACATTACTGTTTACAGTaGGGATGTGCCTCAGAACGT +
Preference number: 2 (lower is better)
Translates to: PAASLFCIRRCGRKAPLGHYCLQ*GCASER
Trigger: ACGTTCTGAGGCACATCCTCACTGTAAACAGTAATG...TCCAAGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR TCA 90 bp AAAAGTCACTTTATTTGCTACATCTTTCAATCTGTCTGCCCTTCTGTTCTTGGCAGCAGCACACACTGCTaGGGGGCTGGCTCACTGGGA +
Preference number: 2 (lower is better)
Translates to: KSHFICYIFQSVCPSVLGSSTHC*GAGSLG
Trigger: TCCCAGTGAGCCAGCCCCTCAGCAGTGTGTGCTGCT...GCCAAGAACAGAAGGGCAGACAGATTGAAAGATGTAGCAAATAAAGTGACTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR GCA 90 bp CCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTTGGAACACACAGTATAAAATaGTGCCTTCTAACTCGGCCC +
Preference number: 2 (lower is better)
Translates to: PAASLFCIRRCGRKAPLGTHSIK*CLLTRP
Trigger: GGGCCGAGTTAGAAGGCAGCATTTTATACTGTGTGT...TCCAAGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR GCA 90 bp CATGCCAGGAGAAAAGTTGCTGCATCCAAAACCAGAGTAGTCTTATCCATTCAAGTCCCTCCTCGCTCCTaGCAGTTCCTAACTTGGCTC +
Preference number: 2 (lower is better)
Translates to: HARRKVAASKTRVVLSIQVPPRS*QFLTWL
Trigger: GAGCCAAGTTAGGAACTGGCAGGAGCGAGGAGGGAC...TTGAATGGATAAGACTACTCTGGTTTTGGATGCAGCAACTTTTCTCCTGGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR CCA 90 bp CCATGTGGGCATCCAGTGGCAGCAGCCAGATGTGTCCTATCAGACTGTGCAGGCTTTAAAGTTAGCCTATaGGATATTGGCCTTTCAAAG +
Preference number: 2 (lower is better)
Translates to: PCGHPVAAARCVLSDCAGFKVSL*DIGLSK
Trigger: CTTTGAAAGGCCAATATCCCATAGGCTAACTTTAAA...GCCTGCACAGTCTGATAGGACACATCTGGCTGCTGCCACTGGATGCCCACATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR TCA 90 bp GATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGCAGATAGATTTGCAGTaGTTCCATGAGCCTGGGTTT +
Preference number: 2 (lower is better)
Translates to: DVKLRFLSSVASQRVFVLQIDLQ*FHEPGF
Trigger: AAACCCAGGCTCATGGAATCACTGCAAATCTATCTG...CAATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398204.8
ENST00000398209.7
ENST00000426930.5
3UTR-3UTR TCA 90 bp GGCAGTACGTTGTCTCATGTGTCTTTGGTGCACTTGCTTAATCTCAGCAGCACAAATGGTAACCAGATGTaGAACTCCGCTTCCTCTCCT +
Preference number: 2 (lower is better)
Translates to: GSTLSHVSLVHLLNLSSTNGNQM*NSASSP
Trigger: AGGAGAGGAAGCGGAGTTTCACATCTGGTTACCATT...TGTGCTGCTGAGATTAAGCAAGTGCACCAAAGACACATGAGACAACGTACTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR TCA 90 bp AAAAGTCACTTTATTTGCTACATCTTTCAATCTGTCTGCCCTTCTGTTCTTGGCGCTGGCTCACTGGGATaGGATGGGATGGACGGATGG +
Preference number: 2 (lower is better)
Translates to: KSHFICYIFQSVCPSVLGAGSLG*DGMDGW
Trigger: CCATCCGTCCATCCCATCTCATCCCAGTGAGCCAGC...GCCAAGAACAGAAGGGCAGACAGATTGAAAGATGTAGCAAATAAAGTGACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR GCA 90 bp GGCTCCTGCATCAGCAAACTGTGGAGGCCAGAAGTTTTGCTGGGCATTTTGTTCTTTACAGTGAGGATGTaGCTCAGAACGTCAAGTTCT +
Preference number: 2 (lower is better)
Translates to: GSCISKLWRPEVLLGILFFTVRM*LRTSSS
Trigger: AGAACTTGACGTTCTGAGGCACATCCTCACTGTAAA...GAACAAAATGCCCAGCAAAACTTCTGGCCTCCACAGTTTGCTGATGCAGGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR GCA 90 bp GGCTCCTGCATCAGCAAACTGTGGAGGCCAGAAGTTTTGCTGGGCATTTTGTTCTGCCTTAGCCCTGCATaGTCATTTCTATTATGGGAT +
Preference number: 2 (lower is better)
Translates to: GSCISKLWRPEVLLGILFCLSPA*SFLLWD
Trigger: ATCCCATAATAGAAATGAGCATGCAGGGCTAAGGCA...GAACAAAATGCCCAGCAAAACTTCTGGCCTCCACAGTTTGCTGATGCAGGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR GCA 90 bp CCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTTGGACAGAAAAATCCTATATaGCTTAGCCCTGCATGCTCA +
Preference number: 2 (lower is better)
Translates to: PAASLFCIRRCGRKAPLGQKNPI*LSPACS
Trigger: TGAGCATGCAGGGCTAAGGCATATAGGATTTTTCTG...TCCAAGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR CCA 90 bp TCAATCTGTCTGCCCTTCTGTTCTTGGCTTGAGCTATGTGGCAACACTGCCCAAGGCCAGAAGTTTTGCTaGGCATTTTGTTCTCTCACT +
Preference number: 2 (lower is better)
Translates to: SICLPFCSWLELCGNTAQGQKFC*AFCSLT
Trigger: AGTGAGAGAACAAAATGCCCAGCAAAACTTCTGGCC...TTGGGCAGTGTTGCCACATAGCTCAAGCCAAGAACAGAAGGGCAGACAGATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR CCA 90 bp ATAGCATTAGCCTTTTGTACACTCAGTACCAGGAAACATTCAGTGCACGTTACACCATCGGCAGCAGAGTaGGCTCCTGCATCAGCAAAC +
Preference number: 2 (lower is better)
Translates to: IALAFCTLSTRKHSVHVTPSAAE*APASAN
Trigger: GTTTGCTGATGCAGGAGCCCACTCTGCTGCCGATGG...TGTAACGTGCACTGAATGTTTCCTGGTACTGAGTGTACAAAAGGCTAATGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR CCA 90 bp ATAGCATTAGCCTTTTGTACACTCAGTACCAGGAAACATTCAGTGCACGTTACAACACTGCTGAGGGGCTaGCTCACTGGGATGAGATGG +
Preference number: 2 (lower is better)
Translates to: IALAFCTLSTRKHSVHVTTLLRG*LTGMRW
Trigger: CCATCTCATCCCAGTGAGCCAGCCCCTCAGCAGTGT...TGTAACGTGCACTGAATGTTTCCTGGTACTGAGTGTACAAAAGGCTAATGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR CAA 90 bp TCCTGCATCAGCAAACTGTGGAGGCCAGAAGTTTTGCTGGGCATTTaGTTCTCTCACTCAACTACTCACTCAATAAAACTGCCTCCAGAC +
Preference number: 2 (lower is better)
Translates to: SCISKLWRPEVLLGI*FSHSTTHSIKLPPD
Trigger: GTCTGGAGGCAGTTTTATTGAGTGAGTAGTTGAGTGAGAGAACAAAATGCCCAGCAAAACTTCTGGCCTCCACAGTTTGCTGATGCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR CAA 90 bp AGCAGAGTGGGCTCCTGCATCAGCAAACTGTGGAGGCCAGAAGTTTaGCTGGGCATTTTGTTCTCTCACTCAACTACTCACTCAATAAAA +
Preference number: 2 (lower is better)
Translates to: SRVGSCISKLWRPEV*LGILFSHSTTHSIK
Trigger: TTTTATTGAGTGAGTAGTTGAGTGAGAGAACAAAATGCCCAGCAAAACTTCTGGCCTCCACAGTTTGCTGATGCAGGAGCCCACTCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR CAA 90 bp TTAGAGTATTGGCAAACCAGAAGCTACCAGCTCACTGGCAGTACGTaGTCTCATGTGTCTTTGGTGCACTTGCTTAATCTCAGCAGCACA +
Preference number: 2 (lower is better)
Translates to: LEYWQTRSYQLTGST*SHVSLVHLLNLSST
Trigger: TGTGCTGCTGAGATTAAGCAAGTGCACCAAAGACACATGAGACAACGTACTGCCAGTGAGCTGGTAGCTTCTGGTTTGCCAATACTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR CAA 90 bp TTTATTTGCTACATCTTTCAATCTGTCTGCCCTTCTGTTCTTGGCTaGAGCTATGTGGCAACACTGCCCAACACTCACCCAAACCTTGGC +
Preference number: 2 (lower is better)
Translates to: FICYIFQSVCPSVLG*SYVATLPNTHPNLG
Trigger: GCCAAGGTTTGGGTGAGTGTTGGGCAGTGTTGCCACATAGCTCAAGCCAAGAACAGAAGGGCAGACAGATTGAAAGATGTAGCAAATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR TCA 90 bp GGCAGTACGTTGTCTCATGTGTCTTTGGTGCACTTGCTTAATCTCAGCAGCACACAGATAGATTTGCAGTaGTTCCATGAGCCTGGGTTT +
Preference number: 2 (lower is better)
Translates to: GSTLSHVSLVHLLNLSSTQIDLQ*FHEPGF
Trigger: AAACCCAGGCTCATGGAATCACTGCAAATCTATCTG...TGTGCTGCTGAGATTAAGCAAGTGCACCAAAGACACATGAGACAACGTACTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR CCA 90 bp AAAAGTCACTTTATTTGCTACATCTTTCAATCTGTCTGCCCTTCTGTTCTTGGCCCATCGGCAGCAGAGTaGGCTCCTGCATCAGCAAAC +
Preference number: 2 (lower is better)
Translates to: KSHFICYIFQSVCPSVLGPSAAE*APASAN
Trigger: GTTTGCTGATGCAGGAGCCCACTCTGCTGCCGATGG...GCCAAGAACAGAAGGGCAGACAGATTGAAAGATGTAGCAAATAAAGTGACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR TCA 90 bp GGCAGTACGTTGTCTCATGTGTCTTTGGTGCACTTGCTTAATCTCAGCAGCACAGGTCTTCGTATTGTCTaGAGAGCAGATAGATTTGCA +
Preference number: 2 (lower is better)
Translates to: GSTLSHVSLVHLLNLSSTGLRIV*RADRFA
Trigger: TGCAAATCTATCTGCTCTTCAGACAATACGAAGACC...TGTGCTGCTGAGATTAAGCAAGTGCACCAAAGACACATGAGACAACGTACTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR GCA 90 bp GAAAGCCCTCACCATGTTGCACTGTCCGATGTATTCCTTTCCACAGATTGCATGCAGAAAAATCCTATATaGCTTAGCCCTGCATGCTCA +
Preference number: 2 (lower is better)
Translates to: ESPHHVALSDVFLSTDCMQKNPI*LSPACS
Trigger: TGAGCATGCAGGGCTAAGGCATATAGGATTTTTCTG...CATGCAATCTGTGGAAAGGAATACATCGGACAGTGCAACATGGTGAGGGCTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR GCA 90 bp AACTTCAGGCCACAAAGGGTTAGAGTATTGGCAAACCAGAAGCTACCAGCTCACCTCATGTGTCTTTGGTaGACTTGCTTAATCTCAGCA +
Preference number: 2 (lower is better)
Translates to: NFRPQRVRVLANQKLPAHLMCLW*TCLISA
Trigger: TGCTGAGATTAAGCAAGTGCACCAAAGACACATGAG...GTGAGCTGGTAGCTTCTGGTTTGCCAATACTCTAACCCTTTGTGGCCTGAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR CCA 90 bp TTGTGTTACTTGTTCAACTTAGCACCGCTATATTTAAAGATTGGGGCTATTTGCACACTGCTGAGGGGCTaGCTCACTGGGATGAGATGG +
Preference number: 2 (lower is better)
Translates to: LCYLFNLAPLYLKIGAICTLLRG*LTGMRW
Trigger: CCATCTCATCCCAGTGAGCCAGCCCCTCAGCAGTGT...GCAAATAGCCCCAATCTTTAAATATAGCGGTGCTAAGTTGAACAAGTAACACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR CCA 90 bp AAGTCCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTCCTGTTCACACTTACTaGAGAGACTTAAATGTTCCT +
Preference number: 2 (lower is better)
Translates to: KSCCIFVLHPQMWEKSSSPVHTY*RDLNVP
Trigger: AGGAACATTTAAGTCTCTCCAGTAAGTGTGAACAGG...AGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR TCA 90 bp ATAGCATTAGCCTTTTGTACACTCAGTACCAGGAAACATTCAGTGCACGTTACATCAGAGCAGACCATGTaGTTGAGCCCATCAATCTCC +
Preference number: 2 (lower is better)
Translates to: IALAFCTLSTRKHSVHVTSEQTM*LSPSIS
Trigger: GGAGATTGATGGGCTCAATCACATGGTCTGCTCTGA...TGTAACGTGCACTGAATGTTTCCTGGTACTGAGTGTACAAAAGGCTAATGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR TCA 90 bp AAGTCCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTTTTACTGCACTGCAATaGCTATGGATAAATGGAACT +
Preference number: 2 (lower is better)
Translates to: KSCCIFVLHPQMWEKSSSFTALQ*LWINGT
Trigger: AGTTCCATTTATCCATAGTCATTGCAGTGCAGTAAA...AGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR GCA 90 bp TTGTGTTACTTGTTCAACTTAGCACCGCTATATTTAAAGATTGGGGCTATTTGCAGCAGAGTGGGCTCCTaGATCAGCAAACTGTGGAGG +
Preference number: 2 (lower is better)
Translates to: LCYLFNLAPLYLKIGAICSRVGS*ISKLWR
Trigger: CCTCCACAGTTTGCTGATGCAGGAGCCCACTCTGCT...GCAAATAGCCCCAATCTTTAAATATAGCGGTGCTAAGTTGAACAAGTAACACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR GCA 90 bp AGGTTATTCCTAATCGAAGCTCCGGGTGTCTTGTTAAAAATACAGCAACCACAGTTCCTTTCCACAGATTaGATGTGCCCTGGGGATCAT +
Preference number: 2 (lower is better)
Translates to: RLFLIEAPGVLLKIQQPQFLSTD*MCPGDH
Trigger: ATGATCCCCAGGGCACATGCAATCTGTGGAAAGGAA...CTGTGGTTGCTGTATTTTTAACAAGACACCCGGAGCTTCGATTAGGAATAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR CCA 90 bp CCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTTGGAGACAAATACGAATTATaGAGAGACACATTTACAGCA +
Preference number: 2 (lower is better)
Translates to: PAASLFCIRRCGRKAPLGDKYEL*RDTFTA
Trigger: TGCTGTAAATGTGTCTCTCCATAATTCGTATTTGTC...TCCAAGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR CCA 90 bp AAGTCCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTTGCTACCTACCTCGGTaGATGAAAAGTCATAAATAT +
Preference number: 2 (lower is better)
Translates to: KSCCIFVLHPQMWEKSSSCYLPR*MKSHKY
Trigger: ATATTTATGACTTTTCATCCACCGAGGTAGGTAGCA...AGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR TCA 90 bp GAAAGCCCTCACCATGTTGCACTGTCCGATGTATTCCTTTCCACAGATTGCATGAGAACACACAGCAAATaGGGAAATCAGAAGTATACT +
Preference number: 2 (lower is better)
Translates to: ESPHHVALSDVFLSTDCMRTHSK*GNQKYT
Trigger: AGTATACTTCTGATTTCCTCATTTGCTGTGTGTTCT...CATGCAATCTGTGGAAAGGAATACATCGGACAGTGCAACATGGTGAGGGCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR GCA 90 bp AGGTTATTCCTAATCGAAGCTCCGGGTGTCTTGTTAAAAATACAGCAACCACAGCACAGTATAAAATGCTaGCTTCTAACTCGGCCCTTC +
Preference number: 2 (lower is better)
Translates to: RLFLIEAPGVLLKIQQPQHSIKC*LLTRPF
Trigger: GAAGGGCCGAGTTAGAAGGCAGCATTTTATACTGTG...CTGTGGTTGCTGTATTTTTAACAAGACACCCGGAGCTTCGATTAGGAATAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR GCA 90 bp CATGCCAGGAGAAAAGTTGCTGCATCCAAAACCAGAGTAGTCTTATCCATTCAATTTACAGTGAGGATGTaGCTCAGAACGTCAAGTTCT +
Preference number: 2 (lower is better)
Translates to: HARRKVAASKTRVVLSIQFTVRM*LRTSSS
Trigger: AGAACTTGACGTTCTGAGGCACATCCTCACTGTAAA...TTGAATGGATAAGACTACTCTGGTTTTGGATGCAGCAACTTTTCTCCTGGCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR CCA 90 bp GAACAAAACTTCAGGCCACAAAGGGTTAGAGTATTGGCAAACCAGAAGCTACCATGTCTCATGTGTCTTTaGTGCACTTGCTTAATCTCA +
Preference number: 2 (lower is better)
Translates to: EQNFRPQRVRVLANQKLPCLMCL*CTCLIS
Trigger: TGAGATTAAGCAAGTGCACCAAAGACACATGAGACA...TGGTAGCTTCTGGTTTGCCAATACTCTAACCCTTTGTGGCCTGAAGTTTTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR CCA 90 bp AAAAGTCACTTTATTTGCTACATCTTTCAATCTGTCTGCCCTTCTGTTCTTGGCCACTCACCCAAACCTTaGCCTGATGGATCGCTTTAT +
Preference number: 2 (lower is better)
Translates to: KSHFICYIFQSVCPSVLGHSPKP*PDGSLY
Trigger: ATAAAGCGATCCATCAGGCCAAGGTTTGGGTGAGTG...GCCAAGAACAGAAGGGCAGACAGATTGAAAGATGTAGCAAATAAAGTGACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR CAA 90 bp AAACTGCCTCCAGACTGTGCACAGGTTAAAGGGATATCACATGTTTaGGACAAATACGAATTATGGAGAGACACATTTACAGCATTGACC +
Preference number: 2 (lower is better)
Translates to: KLPPDCAQVKGISHV*DKYELWRDTFTALT
Trigger: GGTCAATGCTGTAAATGTGTCTCTCCATAATTCGTATTTGTCCAAAACATGTGATATCCCTTTAACCTGTGCACAGTCTGGAGGCAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR CAA 90 bp GCTGCATCTCTGTGGTTTAGATCTAACTTAACCCTTTATGAATGGTaGAAGCTGCTCAACTCAAACAGTAGAATCTTCCGTCATCTTGCT +
Preference number: 2 (lower is better)
Translates to: AASLWFRSNLTLYEW*KLLNSNSRIFRHLA
Trigger: AGCAAGATGACGGAAGATTCTACTGTTTGAGTTGAGCAGCTTCAACCATTCATAAAGGGTTAAGTTAGATCTAAACCACAGAGATGCAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR GCA 90 bp TTGTGTTACTTGTTCAACTTAGCACCGCTATATTTAAAGATTGGGGCTATTTGCCAATGTGTGCTCTCCTaGATATCTGGCCTCAGGAAT +
Preference number: 2 (lower is better)
Translates to: LCYLFNLAPLYLKIGAICQCVLS*ISGLRN
Trigger: ATTCCTGAGGCCAGATATGCAGGAGAGCACACATTG...GCAAATAGCCCCAATCTTTAAATATAGCGGTGCTAAGTTGAACAAGTAACACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR CCA 90 bp TTGTGTTACTTGTTCAACTTAGCACCGCTATATTTAAAGATTGGGGCTATTTGCAAGCTACCAGCTCACTaGCAGTACGTTGTCTCATGT +
Preference number: 2 (lower is better)
Translates to: LCYLFNLAPLYLKIGAICKLPAH*QYVVSC
Trigger: ACATGAGACAACGTACTGCCAGTGAGCTGGTAGCTT...GCAAATAGCCCCAATCTTTAAATATAGCGGTGCTAAGTTGAACAAGTAACACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR CCA 90 bp AGGTTATTCCTAATCGAAGCTCCGGGTGTCTTGTTAAAAATACAGCAACCACAGGATGCTGCATCTCTGTaGTTTAGATCTAACTTAACC +
Preference number: 2 (lower is better)
Translates to: RLFLIEAPGVLLKIQQPQDAASL*FRSNLT
Trigger: GGTTAAGTTAGATCTAAACCACAGAGATGCAGCATC...CTGTGGTTGCTGTATTTTTAACAAGACACCCGGAGCTTCGATTAGGAATAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR CCA 90 bp CATGCCAGGAGAAAAGTTGCTGCATCCAAAACCAGAGTAGTCTTATCCATTCAACCTGTTCACACTTACTaGAGAGACTTAAATGTTCCT +
Preference number: 2 (lower is better)
Translates to: HARRKVAASKTRVVLSIQPVHTY*RDLNVP
Trigger: AGGAACATTTAAGTCTCTCCAGTAAGTGTGAACAGG...TTGAATGGATAAGACTACTCTGGTTTTGGATGCAGCAACTTTTCTCCTGGCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR CAA 90 bp AACAACTCTAATGATAGGTTATTCCTAATCGAAGCTCCGGGTGTCTaGTTAAAAATACAGCAACCACAGCAAATTGAAAGCCCTCACCAT +
Preference number: 2 (lower is better)
Translates to: NNSNDRLFLIEAPGV*LKIQQPQQIESPHH
Trigger: ATGGTGAGGGCTTTCAATTTGCTGTGGTTGCTGTATTTTTAACAAGACACCCGGAGCTTCGATTAGGAATAACCTATCATTAGAGTTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR TCA 90 bp TTGTGTTACTTGTTCAACTTAGCACCGCTATATTTAAAGATTGGGGCTATTTGCCATTACTGTTTACAGTaGGGATGTGCCTCAGAACGT +
Preference number: 2 (lower is better)
Translates to: LCYLFNLAPLYLKIGAICHYCLQ*GCASER
Trigger: ACGTTCTGAGGCACATCCTCACTGTAAACAGTAATG...GCAAATAGCCCCAATCTTTAAATATAGCGGTGCTAAGTTGAACAAGTAACACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR TCA 90 bp AGGTTATTCCTAATCGAAGCTCCGGGTGTCTTGTTAAAAATACAGCAACCACAGAGAACACACAGCAAATaGGGAAATCAGAAGTATACT +
Preference number: 2 (lower is better)
Translates to: RLFLIEAPGVLLKIQQPQRTHSK*GNQKYT
Trigger: AGTATACTTCTGATTTCCTCATTTGCTGTGTGTTCT...CTGTGGTTGCTGTATTTTTAACAAGACACCCGGAGCTTCGATTAGGAATAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR TCA 90 bp CATGCCAGGAGAAAAGTTGCTGCATCCAAAACCAGAGTAGTCTTATCCATTCAATTAAGAGAGTATATCTaGAAACCTGTCTGCAGATTC +
Preference number: 2 (lower is better)
Translates to: HARRKVAASKTRVVLSIQLREYI*KPVCRF
Trigger: GAATCTGCAGACAGGTTTTCAGATATACTCTCTTAA...TTGAATGGATAAGACTACTCTGGTTTTGGATGCAGCAACTTTTCTCCTGGCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR CAA 90 bp AACTTGAACAGCCATAAAACAAATCACACTTGCTCAGGAAAGCAGTaGCCATATACATTTCCATTGGTGTTTGCCATAACCCCAGTAATT +
Preference number: 2 (lower is better)
Translates to: NLNSHKTNHTCSGKQ*PYTFPLVFAITPVI
Trigger: AATTACTGGGGTTATGGCAAACACCAATGGAAATGTATATGGCAACTGCTTTCCTGAGCAAGTGTGATTTGTTTTATGGCTGTTCAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR TCA 90 bp GGATATCACATGTTTTGGACAAATACGAATTATGGAGAGACACATTTACAGCATCAGATAGATTTGCAGTaGTTCCATGAGCCTGGGTTT +
Preference number: 2 (lower is better)
Translates to: GYHMFWTNTNYGETHLQHQIDLQ*FHEPGF
Trigger: AAACCCAGGCTCATGGAATCACTGCAAATCTATCTG...ATGCTGTAAATGTGTCTCTCCATAATTCGTATTTGTCCAAAACATGTGATATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR TCA 90 bp AAAAGTCACTTTATTTGCTACATCTTTCAATCTGTCTGCCCTTCTGTTCTTGGCCAGAACGTCAAGTTCTaGATCCACTATTGTACCTTA +
Preference number: 2 (lower is better)
Translates to: KSHFICYIFQSVCPSVLGQNVKF*IHYCTL
Trigger: TAAGGTACAATAGTGGATTCAGAACTTGACGTTCTG...GCCAAGAACAGAAGGGCAGACAGATTGAAAGATGTAGCAAATAAAGTGACTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR GCA 90 bp TTGTGTTACTTGTTCAACTTAGCACCGCTATATTTAAAGATTGGGGCTATTTGCATCTTTCAATCTGTCTaGCCTTCTGTTCTTGGCTTG +
Preference number: 2 (lower is better)
Translates to: LCYLFNLAPLYLKIGAICIFQSV*PSVLGL
Trigger: CAAGCCAAGAACAGAAGGGCAGACAGATTGAAAGAT...GCAAATAGCCCCAATCTTTAAATATAGCGGTGCTAAGTTGAACAAGTAACACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR CCA 90 bp CATGCCAGGAGAAAAGTTGCTGCATCCAAAACCAGAGTAGTCTTATCCATTCAAATACCATATATCTTCTaGTCCGAAGGTAACTGTAAA +
Preference number: 2 (lower is better)
Translates to: HARRKVAASKTRVVLSIQIPYIF*SEGNCK
Trigger: TTTACAGTTACCTTCGGACCAGAAGATATATGGTAT...TTGAATGGATAAGACTACTCTGGTTTTGGATGCAGCAACTTTTCTCCTGGCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR CCA 90 bp GGATATCACATGTTTTGGACAAATACGAATTATGGAGAGACACATTTACAGCATGTCTTTGAAGATCACTaGATGGATGACGATGATGTG +
Preference number: 2 (lower is better)
Translates to: GYHMFWTNTNYGETHLQHVFEDH*MDDDDV
Trigger: CACATCATCGTCATCCATCCAGTGATCTTCAAAGAC...ATGCTGTAAATGTGTCTCTCCATAATTCGTATTTGTCCAAAACATGTGATATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR TCA 90 bp TTGTGTTACTTGTTCAACTTAGCACCGCTATATTTAAAGATTGGGGCTATTTGCTTAAGAGAGTATATCTaGAAACCTGTCTGCAGATTC +
Preference number: 2 (lower is better)
Translates to: LCYLFNLAPLYLKIGAICLREYI*KPVCRF
Trigger: GAATCTGCAGACAGGTTTTCAGATATACTCTCTTAA...GCAAATAGCCCCAATCTTTAAATATAGCGGTGCTAAGTTGAACAAGTAACACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR TCA 90 bp TTGTGTTACTTGTTCAACTTAGCACCGCTATATTTAAAGATTGGGGCTATTTGCCATCCCTTCCTGTCATaGAAAATGCTGTTTTACATT +
Preference number: 2 (lower is better)
Translates to: LCYLFNLAPLYLKIGAICHPFLS*KMLFYI
Trigger: AATGTAAAACAGCATTTTTCATGACAGGAAGGGATG...GCAAATAGCCCCAATCTTTAAATATAGCGGTGCTAAGTTGAACAAGTAACACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR TCA 90 bp TTGTGTTACTTGTTCAACTTAGCACCGCTATATTTAAAGATTGGGGCTATTTGCCATATAGATACTTCTTaGAACTCTCCCTTGAGACTA +
Preference number: 2 (lower is better)
Translates to: LCYLFNLAPLYLKIGAICHIDTS*NSPLRL
Trigger: TAGTCTCAAGGGAGAGTTTCAAGAAGTATCTATATG...GCAAATAGCCCCAATCTTTAAATATAGCGGTGCTAAGTTGAACAAGTAACACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR CCA 90 bp TTGTGTTACTTGTTCAACTTAGCACCGCTATATTTAAAGATTGGGGCTATTTGCGACAAATACGAATTATaGAGAGACACATTTACAGCA +
Preference number: 2 (lower is better)
Translates to: LCYLFNLAPLYLKIGAICDKYEL*RDTFTA
Trigger: TGCTGTAAATGTGTCTCTCCATAATTCGTATTTGTC...GCAAATAGCCCCAATCTTTAAATATAGCGGTGCTAAGTTGAACAAGTAACACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR GCA 72 bp CAGCGGGGCTACTCACACACAGCTGGGATGGGCTGCTaGCGCTCAGCCAATTTTCACAAGAGCAGACTGGGC +
Preference number: 3 (lower is better)
Translates to: QRGYSHTAGMGC*RSANFHKSRLG
Trigger: GCCCAGTCTGCTCTTGTGAAAATTGGCTGAGCGGCAGCAGCCCATCCCAGCTGTGTGTGAGTAGCCCCGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR GCA 72 bp TCCAGGGAGCAGCCCATCGGCAGCAGAGTGGGCTCCTaGATCAGCAAACTGTGGAGGCCAGAAGTTTTGCTG +
Preference number: 3 (lower is better)
Translates to: SREQPIGSRVGS*ISKLWRPEVLL
Trigger: CAGCAAAACTTCTGGCCTCCACAGTTTGCTGATGCAGGAGCCCACTCTGCTGCCGATGGGCTGCTCCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR GCA 72 bp TCCAGTGGCAGCAGCCAGATGTGTCCTATCAGACTGTaGAGGCAGCTGTCTTGTCCCTCCTCGCTCCTGCCA +
Preference number: 3 (lower is better)
Translates to: SSGSSQMCPIRL*RQLSCPSSLLP
Trigger: TGGCAGGAGCGAGGAGGGACAAGACAGCTGCCTGCACAGTCTGATAGGACACATCTGGCTGCTGCCACTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR CCA 72 bp ACTGCTGAGGGGCTGGCTCACTGGGATGAGATGGGATaGACGGATGGGATAGATGATTTCCAGGGAGCAGCC +
Preference number: 3 (lower is better)
Translates to: TAEGLAHWDEMG*TDGIDDFQGAA
Trigger: GGCTGCTCCCTGGAAATCATCTATCCCATCCGTCCATCCCATCTCATCCCAGTGAGCCAGCCCCTCAGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR CCA 72 bp ATCTCAGCAGCACACACTGCTGAGGGGCTGGCTCACTaGGATGAGATGGGATGGACGGATGGGATAGATGAT +
Preference number: 3 (lower is better)
Translates to: ISAAHTAEGLAH*DEMGWTDGIDD
Trigger: ATCATCTATCCCATCCGTCCATCCCATCTCATCCCAGTGAGCCAGCCCCTCAGCAGTGTGTGCTGCTGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR GCA 72 bp CATGTTGCACTGTCCGATGTATTCCTTTCCACAGATTaGATGTGCCCTGGGGATCATTTCCAGCCTGCAGCG +
Preference number: 3 (lower is better)
Translates to: HVALSDVFLSTD*MCPGDHFQPAA
Trigger: CGCTGCAGGCTGGAAATGATCCCCAGGGCACATGCAATCTGTGGAAAGGAATACATCGGACAGTGCAACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR CAA 90 bp CCATGTGGGCATCCAGTGGCAGCAGCCAGATGTGTCCTATCAGACTGTGCAGGCGTTCTGAATCCACTATaGTACCTTAGGAAACTTGCT +
Preference number: 3 (lower is better)
Translates to: PCGHPVAAARCVLSDCAGVLNPL*YLRKLA
Trigger: AGCAAGTTTCCTAAGGTACAATAGTGGATTCAGAAC...GCCTGCACAGTCTGATAGGACACATCTGGCTGCTGCCACTGGATGCCCACATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR GCA 72 bp AACTTACCAACTGGTAGGGTGATATTTACAACACGCTaGCCATGTGGGCATCCAGTGGCAGCAGCCAGATGT +
Preference number: 3 (lower is better)
Translates to: NLPTGRVIFTTR*PCGHPVAAARC
Trigger: ACATCTGGCTGCTGCCACTGGATGCCCACATGGGCAGCGTGTTGTAAATATCACCCTACCAGTTGGTAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR CCA 72 bp TCAGAGGACCATGCCACTTCCCATCTAAATAAAGAGTaGCTGGAGGACAGTTCATGTGGCCAGTCCACTCCA +
Preference number: 3 (lower is better)
Translates to: SEDHATSHLNKE*LEDSSCGQSTP
Trigger: TGGAGTGGACTGGCCACATGAACTGTCCTCCAGCCACTCTTTATTTAGATGGGAAGTGGCATGGTCCTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR CCA 72 bp TGTCTTGTCCCTCCTCGCTCCTGCCAGTTCCTAACTTaGCTCTCCCCTTCCATATACTCTACAAGCTACTCA +
Preference number: 3 (lower is better)
Translates to: CLVPPRSCQFLT*LSPSIYSTSYS
Trigger: TGAGTAGCTTGTAGAGTATATGGAAGGGGAGAGCCAAGTTAGGAACTGGCAGGAGCGAGGAGGGACAAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR CAA 90 bp AAGTCCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTAAAGCCCTCACCATGTaGCACTGTCCGATGTATTCC +
Preference number: 3 (lower is better)
Translates to: KSCCIFVLHPQMWEKSSSKALTM*HCPMYS
Trigger: GGAATACATCGGACAGTGCAACATGGTGAGGGCTTT...AGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR GCA 72 bp GCTGCTAATGTGCCAGTGGGTGAAGATAAAGATGCCTaGCACCTCTACTCCCTAGAGCATCCTAGGGATATA +
Preference number: 3 (lower is better)
Translates to: AANVPVGEDKDA*HLYSLEHPRDI
Trigger: TATATCCCTAGGATGCTCTAGGGAGTAGAGGTGGCAGGCATCTTTATCTTCACCCACTGGCACATTAGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR CAA 90 bp AAGTCCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTGAATCTTCCGTCATCTaGCTTCAGAGTCAGTGCAGA +
Preference number: 3 (lower is better)
Translates to: KSCCIFVLHPQMWEKSSSESSVI*LQSQCR
Trigger: TCTGCACTGACTCTGAAGCAAGATGACGGAAGATTC...AGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR TCA 72 bp ACATCTTTCAATCTGTCTGCCCTTCTGTTCTTGGCTTaGGCTATGTGGCAACACTGCCCAACACTCACCCAA +
Preference number: 3 (lower is better)
Translates to: TSFNLSALLFLA*AMWQHCPTLTQ
Trigger: TTGGGTGAGTGTTGGGCAGTGTTGCCACATAGCTCAAGCCAAGAACAGAAGGGCAGACAGATTGAAAGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR CCA 72 bp ACAGGGATGCATCAGGCAGGAGTGACTGGCCTATTATaGACTGGACCACAAAGTATTCAGAGTCAACACTCA +
Preference number: 3 (lower is better)
Translates to: TGMHQAGVTGLL*TGPQSIQSQHS
Trigger: TGAGTGTTGACTCTGAATACTTTGTGGTCCAGTCCATAATAGGCCAGTCACTCCTGCCTGATGCATCCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR CAA 90 bp TCAATCTGTCTGCCCTTCTGTTCTTGGCTTGAGCTATGTGGCAACACTGCCCAACAAAGGGTTAGAGTATaGGCAAACCAGAAGCTACCA +
Preference number: 3 (lower is better)
Translates to: SICLPFCSWLELCGNTAQQRVRV*ANQKLP
Trigger: TGGTAGCTTCTGGTTTGCCAATACTCTAACCCTTTG...TTGGGCAGTGTTGCCACATAGCTCAAGCCAAGAACAGAAGGGCAGACAGATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR CAA 90 bp GGCAGTACGTTGTCTCATGTGTCTTTGGTGCACTTGCTTAATCTCAGCAGCACACAGAGGGTCTTCGTATaGTCTGAAGAGCAGATAGAT +
Preference number: 3 (lower is better)
Translates to: GSTLSHVSLVHLLNLSSTQRVFV*SEEQID
Trigger: ATCTATCTGCTCTTCAGACAATACGAAGACCCTCTG...TGTGCTGCTGAGATTAAGCAAGTGCACCAAAGACACATGAGACAACGTACTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR CAA 90 bp AAGTCCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTTTGTCTCATGTGTCTTaGGTGCACTTGCTTAATCTC +
Preference number: 3 (lower is better)
Translates to: KSCCIFVLHPQMWEKSSSLSHVS*VHLLNL
Trigger: GAGATTAAGCAAGTGCACCAAAGACACATGAGACAA...AGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR TCA 72 bp TGGCAACACTGCCCAACACTCACCCAAACCTTGGCCTaGTGGATCGCTTTATGGTCATATCAACAATCACAT +
Preference number: 3 (lower is better)
Translates to: WQHCPTLTQTLA*WIALWSYQQSH
Trigger: ATGTGATTGTTGATATGACCATAAAGCGATCCATCAGGCCAAGGTTTGGGTGAGTGTTGGGCAGTGTTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR TCA 72 bp CATGGAAAATTCATGCCAACTTACCAACTGGTAGGGTaGTATTTACAACACGCTGCCCATGTGGGCATCCAG +
Preference number: 3 (lower is better)
Translates to: HGKFMPTYQLVG*YLQHAAHVGIQ
Trigger: CTGGATGCCCACATGGGCAGCGTGTTGTAAATATCACCCTACCAGTTGGTAAGTTGGCATGAATTTTCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR TCA 72 bp GGAATTAAAAGCACCTCCCCCACAGAGCATATGCTATaGGCATGTGCCAACAATTCCCAGCAGGTGTACTTT +
Preference number: 3 (lower is better)
Translates to: GIKSTSPTEHML*ACANNSQQVYF
Trigger: AAAGTACACCTGCTGGGAATTGTTGGCACATGCTCATAGCATATGCTCTGTGGGGGAGGTGCTTTTAATTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR GCA 72 bp GACCACAAAGTATTCAGAGTCAACACTCAGTCAATCTaGCAAGCACAGAAGTCTGTCTTAGGCATCCAGCAC +
Preference number: 3 (lower is better)
Translates to: DHKVFRVNTQSI*QAQKSVLGIQH
Trigger: GTGCTGGATGCCTAAGACAGACTTCTGTGCTTGGCAGATTGACTGAGTGTTGACTCTGAATACTTTGTGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR GCA 72 bp ACACCTCCTCATGGGGTGGCTTCCACTATCTATAGATaGACATCACCTGTCAAAGGTGATAACCGTGGAAAA +
Preference number: 3 (lower is better)
Translates to: TPPHGVASTIYR*TSPVKGDNRGK
Trigger: TTTTCCACGGTTATCACCTTTGACAGGTGATGTGCATCTATAGATAGTGGAAGCCACCCCATGAGGAGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR CCA 72 bp GTTAGAGTATTGGCAAACCAGAAGCTACCAGCTCACTaGCAGTACGTTGTCTCATGTGTCTTTGGTGCACTT +
Preference number: 3 (lower is better)
Translates to: VRVLANQKLPAH*QYVVSCVFGAL
Trigger: AAGTGCACCAAAGACACATGAGACAACGTACTGCCAGTGAGCTGGTAGCTTCTGGTTTGCCAATACTCTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR CCA 72 bp CTATGTGGCAACACTGCCCAACACTCACCCAAACCTTaGCCTGATGGATCGCTTTATGGTCATATCAACAAT +
Preference number: 3 (lower is better)
Translates to: LCGNTAQHSPKP*PDGSLYGHINN
Trigger: ATTGTTGATATGACCATAAAGCGATCCATCAGGCCAAGGTTTGGGTGAGTGTTGGGCAGTGTTGCCACATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR CCA 72 bp GCTGCTGCCGCTCAGCCAATTTTCACAAGAGCAGACTaGGCCCCTCATTATATTATACTATCAATGGGAAAC +
Preference number: 3 (lower is better)
Translates to: AAAAQPIFTRAD*APHYIILSMGN
Trigger: GTTTCCCATTGATAGTATAATATAATGAGGGGCCCAGTCTGCTCTTGTGAAAATTGGCTGAGCGGCAGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR CAA 90 bp CCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTTGGAGGGATATCACATGTTTaGGACAAATACGAATTATGG +
Preference number: 3 (lower is better)
Translates to: PAASLFCIRRCGRKAPLGGISHV*DKYELW
Trigger: CCATAATTCGTATTTGTCCAAAACATGTGATATCCC...TCCAAGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR CAA 90 bp GAACAAAACTTCAGGCCACAAAGGGTTAGAGTATTGGCAAACCAGAAGCTACCAGTGTCTTTGGTGCACTaGCTTAATCTCAGCAGCACA +
Preference number: 3 (lower is better)
Translates to: EQNFRPQRVRVLANQKLPVSLVH*LNLSST
Trigger: TGTGCTGCTGAGATTAAGCAAGTGCACCAAAGACAC...TGGTAGCTTCTGGTTTGCCAATACTCTAACCCTTTGTGGCCTGAAGTTTTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR CAA 90 bp CATGCCAGGAGAAAAGTTGCTGCATCCAAAACCAGAGTAGTCTTATCCATTCAAAAAGCCCTCACCATGTaGCACTGTCCGATGTATTCC +
Preference number: 3 (lower is better)
Translates to: HARRKVAASKTRVVLSIQKALTM*HCPMYS
Trigger: GGAATACATCGGACAGTGCAACATGGTGAGGGCTTT...TTGAATGGATAAGACTACTCTGGTTTTGGATGCAGCAACTTTTCTCCTGGCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR CAA 90 bp CATGCCAGGAGAAAAGTTGCTGCATCCAAAACCAGAGTAGTCTTATCCATTCAAGAATCTTCCGTCATCTaGCTTCAGAGTCAGTGCAGA +
Preference number: 3 (lower is better)
Translates to: HARRKVAASKTRVVLSIQESSVI*LQSQCR
Trigger: TCTGCACTGACTCTGAAGCAAGATGACGGAAGATTC...TTGAATGGATAAGACTACTCTGGTTTTGGATGCAGCAACTTTTCTCCTGGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR CAA 90 bp TTTCAAAGCATCAGATTCTTTCCCCCACCAGCTGTTAGTGTAACTTCGCAGATGTGTACCTTAGGAAACTaGCTACATTTGGGTCATGTG +
Preference number: 3 (lower is better)
Translates to: FQSIRFFPPPAVSVTSQMCTLGN*LHLGHV
Trigger: CACATGACCCAAATGTAGCAAGTTTCCTAAGGTACA...CATCTGCGAAGTTACACTAACAGCTGGTGGGGGAAAGAATCTGATGCTTTGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR CAA 90 bp ATAGCATTAGCCTTTTGTACACTCAGTACCAGGAAACATTCAGTGCACGTTACATGGAGGCCAGAAGTTTaGCTGGGCATTTTGTTCTCT +
Preference number: 3 (lower is better)
Translates to: IALAFCTLSTRKHSVHVTWRPEV*LGILFS
Trigger: AGAGAACAAAATGCCCAGCAAAACTTCTGGCCTCCA...TGTAACGTGCACTGAATGTTTCCTGGTACTGAGTGTACAAAAGGCTAATGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR CAA 90 bp ATAGCATTAGCCTTTTGTACACTCAGTACCAGGAAACATTCAGTGCACGTTACAGTGTCTTTGGTGCACTaGCTTAATCTCAGCAGCACA +
Preference number: 3 (lower is better)
Translates to: IALAFCTLSTRKHSVHVTVSLVH*LNLSST
Trigger: TGTGCTGCTGAGATTAAGCAAGTGCACCAAAGACAC...TGTAACGTGCACTGAATGTTTCCTGGTACTGAGTGTACAAAAGGCTAATGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR CAA 90 bp GAAAGCCCTCACCATGTTGCACTGTCCGATGTATTCCTTTCCACAGATTGCATGAAGATGATATGGATTTaGTCCATGGATACTATGGGA +
Preference number: 3 (lower is better)
Translates to: ESPHHVALSDVFLSTDCMKMIWI*SMDTMG
Trigger: TCCCATAGTATCCATGGACAAAATCCATATCATCTT...CATGCAATCTGTGGAAAGGAATACATCGGACAGTGCAACATGGTGAGGGCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR TCA 72 bp AAATGTTCCTTTAAATCAGGGTTTACTGCACTGCAATaGCTATGGATAAATGGAACTTCTCAGGCAGCAGGG +
Preference number: 3 (lower is better)
Translates to: KCSFKSGFTALQ*LWINGTSQAAG
Trigger: CCCTGCTGCCTGAGAAGTTCCATTTATCCATAGTCATTGCAGTGCAGTAAACCCTGATTTAAAGGAACATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR CAA 90 bp ATAGCATTAGCCTTTTGTACACTCAGTACCAGGAAACATTCAGTGCACGTTACAGTTCTGAATCCACTATaGTACCTTAGGAAACTTGCT +
Preference number: 3 (lower is better)
Translates to: IALAFCTLSTRKHSVHVTVLNPL*YLRKLA
Trigger: AGCAAGTTTCCTAAGGTACAATAGTGGATTCAGAAC...TGTAACGTGCACTGAATGTTTCCTGGTACTGAGTGTACAAAAGGCTAATGCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR CAA 90 bp AAAAGTCACTTTATTTGCTACATCTTTCAATCTGTCTGCCCTTCTGTTCTTGGCACCCTTTATGAATGGTaGAAGCTGCTCAACTCAAAC +
Preference number: 3 (lower is better)
Translates to: KSHFICYIFQSVCPSVLGTLYEW*KLLNSN
Trigger: GTTTGAGTTGAGCAGCTTCAACCATTCATAAAGGGT...GCCAAGAACAGAAGGGCAGACAGATTGAAAGATGTAGCAAATAAAGTGACTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR CAA 90 bp AGGTTATTCCTAATCGAAGCTCCGGGTGTCTTGTTAAAAATACAGCAACCACAGACATATAGATACTTCTaGAAACTCTCCCTTGAGACT +
Preference number: 3 (lower is better)
Translates to: RLFLIEAPGVLLKIQQPQTYRYF*KLSLET
Trigger: AGTCTCAAGGGAGAGTTTCAAGAAGTATCTATATGT...CTGTGGTTGCTGTATTTTTAACAAGACACCCGGAGCTTCGATTAGGAATAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR GCA 72 bp AAAAGTCACTTTATTTGCTACATCTTTCAATCTGTCTaGCCTTCTGTTCTTGGCTTGAGCTATGTGGCAACA +
Preference number: 3 (lower is better)
Translates to: KSHFICYIFQSV*PSVLGLSYVAT
Trigger: TGTTGCCACATAGCTCAAGCCAAGAACAGAAGGGCAGACAGATTGAAAGATGTAGCAAATAAAGTGACTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR CCA 72 bp CAGACTGTGCACAGGTTAAAGGGATATCACATGTTTTaGACAAATACGAATTATGGAGAGACACATTTACAG +
Preference number: 3 (lower is better)
Translates to: QTVHRLKGYHMF*TNTNYGETHLQ
Trigger: CTGTAAATGTGTCTCTCCATAATTCGTATTTGTCCAAAACATGTGATATCCCTTTAACCTGTGCACAGTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR-3UTR CAA 90 bp TCTGAGACAGACACAAAATCACTTCTCTGGTATTTCTGCCAAAAATACATATCTATGTGTGATCCTGGATaGGATTTGGATGGGGAAAAT +
Preference number: 3 (lower is better)
Translates to: SETDTKSLLWYFCQKYISMCDPG*DLDGEN
Trigger: ATTTTCCCCATCCAAATCCAATCCAGGATCACACAT...AGATATGTATTTTTGGCAGAAATACCAGAGAAGTGATTTTGTGTCTGTCTCAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000439864.5
CDS-3UTR CCA 90 bp CCATGTGGGCATCCAGTGGCAGCAGCCAGATGTGTCCTATCAGACTGTGCAGGCCCACTGCCGCCTGCATaGTGCTGCCGTCAGCCCGCC +
Preference number: 4 (lower is better)
Translates to: PCGHPVAAARCVLSDCAGPLPPA*CCRQPA
Trigger: GGCGGGCTGACGGCAGCACCATGCAGGCGGCAGTGG...GCCTGCACAGTCTGATAGGACACATCTGGCTGCTGCCACTGGATGCCCACATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp CCATGTGGGCATCCAGTGGCAGCAGCCAGATGTGTCCTATCAGACTGTGCAGGCGGGGGAGCGAGCGAGTaGTGCATTGGGCGGTTGGCT +
Preference number: 4 (lower is better)
Translates to: PCGHPVAAARCVLSDCAGGGASE*CIGRLA
Trigger: AGCCAACCGCCCAATGCAGCACTCGCTCGCTCCCCC...GCCTGCACAGTCTGATAGGACACATCTGGCTGCTGCCACTGGATGCCCACATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398204.8
CDS-3UTR GCA 90 bp ACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTCGGCGGCCGTGGCGCTaGAACCTCCACCGCGGCTCA +
Preference number: 4 (lower is better)
Translates to: TRCETPLPLLCSISEGLRRRPWR*NLHRGS
Trigger: TGAGCCGCGGTGGAGGTTGCAGCGCCACGGCCGCCG...ACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398204.8
CDS-3UTR GCA 90 bp AAGTCCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTCCGCCTGCATGGTGCTaGCGTCAGCCCGCCTCGCCC +
Preference number: 4 (lower is better)
Translates to: KSCCIFVLHPQMWEKSSSPPAWC*RQPASP
Trigger: GGGCGAGGCGGGCTGACGGCAGCACCATGCAGGCGG...AGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp CCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTTGGATCCCACCTCATCCCCTaGCAAAGGCTCGGGCGGGCG +
Preference number: 4 (lower is better)
Translates to: PAASLFCIRRCGRKAPLGSHLIP*QRLGRA
Trigger: CGCCCGCCCGAGCCTTTGCCAGGGGATGAGGTGGGA...TCCAAGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398204.8
CDS-3UTR TCA 90 bp GTAACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGCCCGAGCGGTAGATaGGGCGCAGTGGCACGATGC +
Preference number: 4 (lower is better)
Translates to: VTRCETPLPLLCSISEGLRPSGR*GAVARC
Trigger: GCATCGTGCCACTGCGCCTCATCTACCGCTCGGGCG...AAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGTTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp CTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGTCTGAAGAGCAGATAGATCCGCCTGCATGGTGCTaGCGTCAGCCCGCCTCGCCC +
Preference number: 4 (lower is better)
Translates to: LSSVASQRVFVLSEEQIDPPAWC*RQPASP
Trigger: GGGCGAGGCGGGCTGACGGCAGCACCATGCAGGCGG...ATCTATCTGCTCTTCAGACAATACGAAGACCCTCTGAGATGCTACAGAGGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp CCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTTGGAGGCGCAGTGGCACGATaGTCTGGCGCTCCACGAAGC +
Preference number: 4 (lower is better)
Translates to: PAASLFCIRRCGRKAPLGGAVAR*SGAPRS
Trigger: GCTTCGTGGAGCGCCAGAGCATCGTGCCACTGCGCC...TCCAAGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp CCATGTGGGCATCCAGTGGCAGCAGCCAGATGTGTCCTATCAGACTGTGCAGGCCAGTGTCTCCCATTATaGACCCGGACCACGTGTCCT +
Preference number: 4 (lower is better)
Translates to: PCGHPVAAARCVLSDCAGQCLPL*TRTTCP
Trigger: AGGACACGTGGTCCGGGTGCATAATGGGAGACACTG...GCCTGCACAGTCTGATAGGACACATCTGGCTGCTGCCACTGGATGCCCACATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp CTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGTCTGAAGAGCAGATAGATGTGCTGCGGCGGCCGTaGCGCTGCAACCTCCACCGC +
Preference number: 4 (lower is better)
Translates to: LSSVASQRVFVLSEEQIDVLRRP*RCNLHR
Trigger: GCGGTGGAGGTTGCAGCGCCACGGCCGCCGCAGCAC...ATCTATCTGCTCTTCAGACAATACGAAGACCCTCTGAGATGCTACAGAGGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398204.8
CDS-3UTR TCA 90 bp GGCTCCTGCATCAGCAAACTGTGGAGGCCAGAAGTTTTGCTGGGCATTTTGTTCAGCAGCACACACTGCTaGGGGGCTGGCTCACTGGGA +
Preference number: 4 (lower is better)
Translates to: GSCISKLWRPEVLLGILFSSTHC*GAGSLG
Trigger: TCCCAGTGAGCCAGCCCCTCAGCAGTGTGTGCTGCT...GAACAAAATGCCCAGCAAAACTTCTGGCCTCCACAGTTTGCTGATGCAGGAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp GGCTCCTGCATCAGCAAACTGTGGAGGCCAGAAGTTTTGCTGGGCATTTTGTTCGTGTCGAGCGCGTCGTaGCGACTTTCGTCTTCGCCG +
Preference number: 4 (lower is better)
Translates to: GSCISKLWRPEVLLGILFVSSAS*RLSSSP
Trigger: CGGCGAAGACGAAAGTCGGCACGACGCGCTCGACAC...GAACAAAATGCCCAGCAAAACTTCTGGCCTCCACAGTTTGCTGATGCAGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp CCATGTGGGCATCCAGTGGCAGCAGCCAGATGTGTCCTATCAGACTGTGCAGGCTGTCCTATCAGACTGTaGAGGCAGCTGTCTTGTCCC +
Preference number: 4 (lower is better)
Translates to: PCGHPVAAARCVLSDCAGCPIRL*RQLSCP
Trigger: GGGACAAGACAGCTGCCTGCACAGTCTGATAGGACA...GCCTGCACAGTCTGATAGGACACATCTGGCTGCTGCCACTGGATGCCCACATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp GTAACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTGTCTGGGCGAGGGAGTaGCCAGGCTCAGGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: VTRCETPLPLLCSISEGLVWARE*PGSGAW
Trigger: CCAAGCACCTGAGCCTGGGCACTCCCTCGCCCAGAC...AAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426930.5
CDS-3UTR CCA 90 bp GGCTCCTGCATCAGCAAACTGTGGAGGCCAGAAGTTTTGCTGGGCATTTTGTTCCACACACAGCTGGGATaGGCTGCTGCCGCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: GSCISKLWRPEVLLGILFHTQLG*AAAAQP
Trigger: TGGCTGAGCGGCAGCAGCCCATCCCAGCTGTGTGTG...GAACAAAATGCCCAGCAAAACTTCTGGCCTCCACAGTTTGCTGATGCAGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp AAGTCCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTAGCAGCACACACTGCTaGGGGGCTGGCTCACTGGGA +
Preference number: 4 (lower is better)
Translates to: KSCCIFVLHPQMWEKSSSSSTHC*GAGSLG
Trigger: TCCCAGTGAGCCAGCCCCTCAGCAGTGTGTGCTGCT...AGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGGACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp GGCAGTACGTTGTCTCATGTGTCTTTGGTGCACTTGCTTAATCTCAGCAGCACAACAGCCACTGCCGCCTaGATGGTGCTGCCGTCAGCC +
Preference number: 4 (lower is better)
Translates to: GSTLSHVSLVHLLNLSSTTATAA*MVLPSA
Trigger: GGCTGACGGCAGCACCATGCAGGCGGCAGTGGCTGT...TGTGCTGCTGAGATTAAGCAAGTGCACCAAAGACACATGAGACAACGTACTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp AGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTCACGGACACAGCCACTaGCGCCTGCATGGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: RCETPLPLLCSISEGLRIHGHSH*RLHGAA
Trigger: GGCAGCACCATGCAGGCGGCAGTGGCTGTGTCCGTG...AATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp AGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGGCGCAGTGGCACGATaGTCTGGCGCTCCACGAAGC +
Preference number: 4 (lower is better)
Translates to: RCETPLPLLCSISEGLRIGAVAR*SGAPRS
Trigger: GCTTCGTGGAGCGCCAGAGCATCGTGCCACTGCGCC...AATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp GGCTCCTGCATCAGCAAACTGTGGAGGCCAGAAGTTTTGCTGGGCATTTTGTTCTCCACCGCGGCTCAGTaGTGCATTGTGCTTCGCGGA +
Preference number: 4 (lower is better)
Translates to: GSCISKLWRPEVLLGILFSTAAQ*CIVLRG
Trigger: TCCGCGAAGCACAATGCAGCACTGAGCCGCGGTGGA...GAACAAAATGCCCAGCAAAACTTCTGGCCTCCACAGTTTGCTGATGCAGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398204.8
CDS-3UTR CCA 90 bp CCATGTGGGCATCCAGTGGCAGCAGCCAGATGTGTCCTATCAGACTGTGCAGGCGGACTAAATGCCCCATaGTCTCCCAAAGTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: PCGHPVAAARCVLSDCAGGLNAP*SPKVLC
Trigger: GCAGAGAACTTTGGGAGACCATGGGGCATTTAGTCC...GCCTGCACAGTCTGATAGGACACATCTGGCTGCTGCCACTGGATGCCCACATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp AGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTTGGGATGGGACTGTCTaGGCGAGGGAGTGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: RCETPLPLLCSISEGLRIWDGTV*ARECPG
Trigger: GCCTGGGCACTCCCTCGCCCAGACAGTCCCATCCCA...AATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426930.5
CDS-3UTR CCA 90 bp ACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTCCTGGGCTTATGCCTTaGGATGGGACTGTCTGGGCG +
Preference number: 4 (lower is better)
Translates to: TRCETPLPLLCSISEGLRPGLMP*DGTVWA
Trigger: CGCCCAGACAGTCCCATCCCAAGGCATAAGCCCAGG...ACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426930.5
CDS-3UTR GCA 90 bp CTGCTTAATTTACTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTTTTTCCCCGCCTGCATGGTGCTaGCGTCAGCCCGCCTCGCCC +
Preference number: 4 (lower is better)
Translates to: LLNLLLTLFAQDLGVPFSPPAWC*RQPASP
Trigger: GGGCGAGGCGGGCTGACGGCAGCACCATGCAGGCGG...GGAAAAAGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATTAAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR GCA 90 bp CTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGTCTGAAGAGCAGATAGATCACGGACACAGCCACTaGCGCCTGCATGGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: LSSVASQRVFVLSEEQIDHGHSH*RLHGAA
Trigger: GGCAGCACCATGCAGGCGGCAGTGGCTGTGTCCGTG...ATCTATCTGCTCTTCAGACAATACGAAGACCCTCTGAGATGCTACAGAGGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp AGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGTGTCGAGCGCGTCGTaGCGACTTTCGTCTTCGCCG +
Preference number: 4 (lower is better)
Translates to: RCETPLPLLCSISEGLRIVSSAS*RLSSSP
Trigger: CGGCGAAGACGAAAGTCGGCACGACGCGCTCGACAC...AATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp GAAAGCCCTCACCATGTTGCACTGTCCGATGTATTCCTTTCCACAGATTGCATGACCGCGGCTCAGTGCTaGATTGTGCTTCGCGGACGC +
Preference number: 4 (lower is better)
Translates to: ESPHHVALSDVFLSTDCMTAAQC*IVLRGR
Trigger: GCGTCCGCGAAGCACAATGCAGCACTGAGCCGCGGT...CATGCAATCTGTGGAAAGGAATACATCGGACAGTGCAACATGGTGAGGGCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398204.8
CDS-3UTR GCA 90 bp GGCTCCTGCATCAGCAAACTGTGGAGGCCAGAAGTTTTGCTGGGCATTTTGTTCGTCCCTCCTCGCTCCTaGCAGTTCCTAACTTGGCTC +
Preference number: 4 (lower is better)
Translates to: GSCISKLWRPEVLLGILFVPPRS*QFLTWL
Trigger: GAGCCAAGTTAGGAACTGGCAGGAGCGAGGAGGGAC...GAACAAAATGCCCAGCAAAACTTCTGGCCTCCACAGTTTGCTGATGCAGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp ACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTAGCCCCCTGGGCTTATaGCTTGGGATGGGACTGTCT +
Preference number: 4 (lower is better)
Translates to: TRCETPLPLLCSISEGLRSPLGL*LGMGLS
Trigger: AGACAGTCCCATCCCAAGGCATAAGCCCAGGGGGCT...ACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426930.5
CDS-3UTR CCA 90 bp ACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTCCATCGGCAGCAGAGTaGGCTCCTGCATCAGCAAAC +
Preference number: 4 (lower is better)
Translates to: TRCETPLPLLCSISEGLRPSAAE*APASAN
Trigger: GTTTGCTGATGCAGGAGCCCACTCTGCTGCCGATGG...ACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp GATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGGCTGTCAGAGCCCCCTaGGCTTATGCCTTGGGATGG +
Preference number: 4 (lower is better)
Translates to: DVKLRFLSSVASQRVFVLAVRAP*AYALGW
Trigger: CCATCCCAAGGCATAAGCCCAGGGGGCTCTGACAGC...CAATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426930.5
CDS-3UTR CCA 90 bp AGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTTCCAGACTCCCTGTCTaGGGGCTGTCAGAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: RCETPLPLLCSISEGLRISRLPV*GLSEPP
Trigger: AGGGGGCTCTGACAGCCCCCAGACAGGGAGTCTGGA...AATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426930.5
CDS-3UTR TCA 90 bp ACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTGACGGATGGGATAGATaGTTTCCAGGGAGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: TRCETPLPLLCSISEGLRDGWDR*FPGSSP
Trigger: TGGGCTGCTCCCTGGAAATCATCTATCCCATCCGTC...ACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp GTAACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCCACCACACCCCTTGTaGCAATGTGTGCTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: VTRCETPLPLLCSISEGLPPHPL*QCVLSC
Trigger: GCAGGAGAGCACACATTGTCACAAGGGGTGTGGTGG...AAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp GACTATCTGCTTAATTTACTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTCTGCCGCCTGCATGGTaGTGCCGTCAGCCCGCCTCG +
Preference number: 4 (lower is better)
Translates to: DYLLNLLLTLFAQDLGVPLPPAW*CRQPAS
Trigger: CGAGGCGGGCTGACGGCAGCACCATGCAGGCGGCAG...AGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATTAAGCAGATAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR GCA 90 bp GAACAAAACTTCAGGCCACAAAGGGTTAGAGTATTGGCAAACCAGAAGCTACCAACAGCCACTGCCGCCTaGATGGTGCTGCCGTCAGCC +
Preference number: 4 (lower is better)
Translates to: EQNFRPQRVRVLANQKLPTATAA*MVLPSA
Trigger: GGCTGACGGCAGCACCATGCAGGCGGCAGTGGCTGT...TGGTAGCTTCTGGTTTGCCAATACTCTAACCCTTTGTGGCCTGAAGTTTTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp CCATGTGGGCATCCAGTGGCAGCAGCCAGATGTGTCCTATCAGACTGTGCAGGCCACAGTATAAAATGCTaGCTTCTAACTCGGCCCTTC +
Preference number: 4 (lower is better)
Translates to: PCGHPVAAARCVLSDCAGHSIKC*LLTRPF
Trigger: GAAGGGCCGAGTTAGAAGGCAGCATTTTATACTGTG...GCCTGCACAGTCTGATAGGACACATCTGGCTGCTGCCACTGGATGCCCACATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp CCATGTGGGCATCCAGTGGCAGCAGCCAGATGTGTCCTATCAGACTGTGCAGGCAACACTCAGTCAATCTaGCAAGCACAGAAGTCTGTC +
Preference number: 4 (lower is better)
Translates to: PCGHPVAAARCVLSDCAGNTQSI*QAQKSV
Trigger: GACAGACTTCTGTGCTTGGCAGATTGACTGAGTGTT...GCCTGCACAGTCTGATAGGACACATCTGGCTGCTGCCACTGGATGCCCACATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp TTACTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTTTTTCCATTAGAGGTCCACTGCCGCCTGCATaGTGCTGCCGTCAGCCCGCC +
Preference number: 4 (lower is better)
Translates to: LLLTLFAQDLGVPFSIRGPLPPA*CCRQPA
Trigger: GGCGGGCTGACGGCAGCACCATGCAGGCGGCAGTGG...ACCTCTAATGGAAAAAGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR CCA 90 bp ATAGCATTAGCCTTTTGTACACTCAGTACCAGGAAACATTCAGTGCACGTTACACCACTGCCGCCTGCATaGTGCTGCCGTCAGCCCGCC +
Preference number: 4 (lower is better)
Translates to: IALAFCTLSTRKHSVHVTPLPPA*CCRQPA
Trigger: GGCGGGCTGACGGCAGCACCATGCAGGCGGCAGTGG...TGTAACGTGCACTGAATGTTTCCTGGTACTGAGTGTACAAAAGGCTAATGCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp AGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGTAGATGAGGCGCAGTaGCACGATGCTCTGGCGCTC +
Preference number: 4 (lower is better)
Translates to: RCETPLPLLCSISEGLRIVDEAQ*HDALAL
Trigger: GAGCGCCAGAGCATCGTGCCACTGCGCCTCATCTAC...AATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp CCATGTGGGCATCCAGTGGCAGCAGCCAGATGTGTCCTATCAGACTGTGCAGGCGGCCAGAAGTTTTGCTaGGCATTTTGTTCTCTCACT +
Preference number: 4 (lower is better)
Translates to: PCGHPVAAARCVLSDCAGGQKFC*AFCSLT
Trigger: AGTGAGAGAACAAAATGCCCAGCAAAACTTCTGGCC...GCCTGCACAGTCTGATAGGACACATCTGGCTGCTGCCACTGGATGCCCACATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp AAGTCCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTACACTGCTGAGGGGCTaGCTCACTGGGATGAGATGG +
Preference number: 4 (lower is better)
Translates to: KSCCIFVLHPQMWEKSSSTLLRG*LTGMRW
Trigger: CCATCTCATCCCAGTGAGCCAGCCCCTCAGCAGTGT...AGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp AAGTCCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTCATGTGGGCATCCAGTaGCAGCAGCCAGATGTGTCC +
Preference number: 4 (lower is better)
Translates to: KSCCIFVLHPQMWEKSSSHVGIQ*QQPDVS
Trigger: GGACACATCTGGCTGCTGCCACTGGATGCCCACATG...AGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp TCAATCTGTCTGCCCTTCTGTTCTTGGCTTGAGCTATGTGGCAACACTGCCCAACATGTGGGCATCCAGTaGCAGCAGCCAGATGTGTCC +
Preference number: 4 (lower is better)
Translates to: SICLPFCSWLELCGNTAQHVGIQ*QQPDVS
Trigger: GGACACATCTGGCTGCTGCCACTGGATGCCCACATG...TTGGGCAGTGTTGCCACATAGCTCAAGCCAAGAACAGAAGGGCAGACAGATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp GGCTCCTGCATCAGCAAACTGTGGAGGCCAGAAGTTTTGCTGGGCATTTTGTTCTTGGGGGTGCTAGTTTaGAGGGGCAAGTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: GSCISKLWRPEVLLGILFLGVLV*RGKSSS
Trigger: GCTGGAAGACTTGCCCCTCCAAACTAGCACCCCCAA...GAACAAAATGCCCAGCAAAACTTCTGGCCTCCACAGTTTGCTGATGCAGGAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR CAA 72 bp CCATGTTGCACTGTCCGATGTATTCCTTTCCACAGATaGCATGTGCCCTGGGGATCATTTCCAGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PCCTVRCIPFHR*HVPWGSFPACS
Trigger: GCTGCAGGCTGGAAATGATCCCCAGGGCACATGCAATCTGTGGAAAGGAATACATCGGACAGTGCAACATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR CAA 72 bp CTGTCTTGTCCCTCCTCGCTCCTGCCAGTTCCTAACTaGGCTCTCCCCTTCCATATACTCTACAAGCTACTC +
Preference number: 4 (lower is better)
Translates to: LSCPSSLLPVPN*ALPFHILYKLL
Trigger: GAGTAGCTTGTAGAGTATATGGAAGGGGAGAGCCAAGTTAGGAACTGGCAGGAGCGAGGAGGGACAAGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp ATAGCATTAGCCTTTTGTACACTCAGTACCAGGAAACATTCAGTGCACGTTACACGCCCGAGCGGTAGATaGGGCGCAGTGGCACGATGC +
Preference number: 4 (lower is better)
Translates to: IALAFCTLSTRKHSVHVTRPSGR*GAVARC
Trigger: GCATCGTGCCACTGCGCCTCATCTACCGCTCGGGCG...TGTAACGTGCACTGAATGTTTCCTGGTACTGAGTGTACAAAAGGCTAATGCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp CTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGTCTGAAGAGCAGATAGATGCTGGCTCACTGGGATaGGATGGGATGGACGGATGG +
Preference number: 4 (lower is better)
Translates to: LSSVASQRVFVLSEEQIDAGSLG*DGMDGW
Trigger: CCATCCGTCCATCCCATCTCATCCCAGTGAGCCAGC...ATCTATCTGCTCTTCAGACAATACGAAGACCCTCTGAGATGCTACAGAGGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp AGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTCCCACCAATATAAGCTaGCCCGCTCCGGCTACTCTC +
Preference number: 4 (lower is better)
Translates to: RCETPLPLLCSISEGLRIPTNIS*PAPATL
Trigger: GAGAGTAGCCGGAGCGGGGCAGCTTATATTGGTGGG...AATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp AGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTCTCAGTGCTGCATTGTaGTTCGCGGACGCTTCCGCT +
Preference number: 4 (lower is better)
Translates to: RCETPLPLLCSISEGLRILSAAL*FADASA
Trigger: AGCGGAAGCGTCCGCGAAGCACAATGCAGCACTGAG...AATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398204.8
CDS-3UTR GCA 90 bp TCAATCTGTCTGCCCTTCTGTTCTTGGCTTGAGCTATGTGGCAACACTGCCCAAAGCAGAGTGGGCTCCTaGATCAGCAAACTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: SICLPFCSWLELCGNTAQSRVGS*ISKLWR
Trigger: CCTCCACAGTTTGCTGATGCAGGAGCCCACTCTGCT...TTGGGCAGTGTTGCCACATAGCTCAAGCCAAGAACAGAAGGGCAGACAGATTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp GGCAGTACGTTGTCTCATGTGTCTTTGGTGCACTTGCTTAATCTCAGCAGCACAGTCCCTCCTCGCTCCTaGCAGTTCCTAACTTGGCTC +
Preference number: 4 (lower is better)
Translates to: GSTLSHVSLVHLLNLSSTVPPRS*QFLTWL
Trigger: GAGCCAAGTTAGGAACTGGCAGGAGCGAGGAGGGAC...TGTGCTGCTGAGATTAAGCAAGTGCACCAAAGACACATGAGACAACGTACTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp GGCAGTACGTTGTCTCATGTGTCTTTGGTGCACTTGCTTAATCTCAGCAGCACAGCTGGGATGGGCTGCTaGCGCTCAGCCAATTTTCAC +
Preference number: 4 (lower is better)
Translates to: GSTLSHVSLVHLLNLSSTAGMGC*RSANFH
Trigger: GTGAAAATTGGCTGAGCGGCAGCAGCCCATCCCAGC...TGTGCTGCTGAGATTAAGCAAGTGCACCAAAGACACATGAGACAACGTACTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp GTAACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTACAGCTGGGATGGGCTaGTGCCGCTCAGCCAATTTT +
Preference number: 4 (lower is better)
Translates to: VTRCETPLPLLCSISEGLTAGMG*CRSANF
Trigger: AAAATTGGCTGAGCGGCAGCAGCCCATCCCAGCTGT...AAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp GGCAGTACGTTGTCTCATGTGTCTTTGGTGCACTTGCTTAATCTCAGCAGCACACCATCGGCAGCAGAGTaGGCTCCTGCATCAGCAAAC +
Preference number: 4 (lower is better)
Translates to: GSTLSHVSLVHLLNLSSTPSAAE*APASAN
Trigger: GTTTGCTGATGCAGGAGCCCACTCTGCTGCCGATGG...TGTGCTGCTGAGATTAAGCAAGTGCACCAAAGACACATGAGACAACGTACTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp AGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTACACTGCTGAGGGGCTaGCTCACTGGGATGAGATGG +
Preference number: 4 (lower is better)
Translates to: RCETPLPLLCSISEGLRITLLRG*LTGMRW
Trigger: CCATCTCATCCCAGTGAGCCAGCCCCTCAGCAGTGT...AATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp CCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTTGGAGGAGGACAGTTCATGTaGCCAGTCCACTCCATAAGG +
Preference number: 4 (lower is better)
Translates to: PAASLFCIRRCGRKAPLGGGQFM*PVHSIR
Trigger: CCTTATGGAGTGGACTGGCCACATGAACTGTCCTCC...TCCAAGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp AGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTCCAGGCTCAGGTGCTTaGGGCTCCCTCTCAGTTGAA +
Preference number: 4 (lower is better)
Translates to: RCETPLPLLCSISEGLRIPGSGA*GSLSVE
Trigger: TTCAACTGAGAGGGAGCCCCAAGCACCTGAGCCTGG...AATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426930.5
CDS-3UTR CCA 90 bp AGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGCTTATGCCTTGGGATaGGACTGTCTGGGCGAGGGA +
Preference number: 4 (lower is better)
Translates to: RCETPLPLLCSISEGLRIAYALG*DCLGEG
Trigger: TCCCTCGCCCAGACAGTCCCATCCCAAGGCATAAGC...AATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426930.5
CDS-3UTR TCA 90 bp TCTATCTGCCATCTGCCATGTCAAATCCTAATTGTGTTATGTAGCAGAAAGGATCGCCCGAGCGGTAGATaGGGCGCAGTGGCACGATGC +
Preference number: 4 (lower is better)
Translates to: SICHLPCQILIVLCSRKDRPSGR*GAVARC
Trigger: GCATCGTGCCACTGCGCCTCATCTACCGCTCGGGCG...ATCCTTTCTGCTACATAACACAATTAGGATTTGACATGGCAGATGGCAGATAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439864.5
CDS-3UTR TCA 90 bp GGCTCCTGCATCAGCAAACTGTGGAGGCCAGAAGTTTTGCTGGGCATTTTGTTCCCTCTCCAGTTTCAATaGAGCCATTGCCACACTCAG +
Preference number: 4 (lower is better)
Translates to: GSCISKLWRPEVLLGILFPLQFQ*SHCHTQ
Trigger: CTGAGTGTGGCAATGGCTTCATTGAAACTGGAGAGG...GAACAAAATGCCCAGCAAAACTTCTGGCCTCCACAGTTTGCTGATGCAGGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp AGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTATGCTGAGTTTGTGCTaGCTCCGGGAGGAATGTCGC +
Preference number: 4 (lower is better)
Translates to: RCETPLPLLCSISEGLRIMLSLC*LREECR
Trigger: GCGACATTCCTCCCGGAGTCAGCACAAACTCAGCAT...AATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426930.5
CDS-3UTR TCA 90 bp TTTCAAAGCATCAGATTCTTTCCCCCACCAGCTGTTAGTGTAACTTCGCAGATGGCTGGCTCACTGGGATaGGATGGGATGGACGGATGG +
Preference number: 4 (lower is better)
Translates to: FQSIRFFPPPAVSVTSQMAGSLG*DGMDGW
Trigger: CCATCCGTCCATCCCATCTCATCCCAGTGAGCCAGC...CATCTGCGAAGTTACACTAACAGCTGGTGGGGGAAAGAATCTGATGCTTTGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp ACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTCTTCTGTTCTTGGCTTaGGCTATGTGGCAACACTGC +
Preference number: 4 (lower is better)
Translates to: TRCETPLPLLCSISEGLRLLFLA*AMWQHC
Trigger: GCAGTGTTGCCACATAGCTCAAGCCAAGAACAGAAG...ACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp ACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTGCAACCACAGCAAATTaGAAGCCCTCACCATGTTGC +
Preference number: 4 (lower is better)
Translates to: TRCETPLPLLCSISEGLRATTAN*KPSPCC
Trigger: GCAACATGGTGAGGGCTTTCAATTTGCTGTGGTTGC...ACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp CTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGTCTGAAGAGCAGATAGATCCACCACACCCCTTGTaGCAATGTGTGCTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LSSVASQRVFVLSEEQIDPPHPL*QCVLSC
Trigger: GCAGGAGAGCACACATTGTCACAAGGGGTGTGGTGG...ATCTATCTGCTCTTCAGACAATACGAAGACCCTCTGAGATGCTACAGAGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp ACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTGGGCTCCCTCTCAGTTaGATTAGACCGAGGTCTAAA +
Preference number: 4 (lower is better)
Translates to: TRCETPLPLLCSISEGLRGLPLS*IRPRSK
Trigger: TTTAGACCTCGGTCTAATTCAACTGAGAGGGAGCCC...ACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426930.5
CDS-3UTR GCA 90 bp TCTGAGACAGACACAAAATCACTTCTCTGGTATTTCTGCCAAAAATACATATCTCCGCCTGCATGGTGCTaGCGTCAGCCCGCCTCGCCC +
Preference number: 4 (lower is better)
Translates to: SETDTKSLLWYFCQKYISPPAWC*RQPASP
Trigger: GGGCGAGGCGGGCTGACGGCAGCACCATGCAGGCGG...AGATATGTATTTTTGGCAGAAATACCAGAGAAGTGATTTTGTGTCTGTCTCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439864.5
CDS-3UTR GCA 90 bp TTACTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTTTTTCCATTAGAGGTCACGGACACAGCCACTaGCGCCTGCATGGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: LLLTLFAQDLGVPFSIRGHGHSH*RLHGAA
Trigger: GGCAGCACCATGCAGGCGGCAGTGGCTGTGTCCGTG...ACCTCTAATGGAAAAAGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR GCA 90 bp AACTTCAGGCCACAAAGGGTTAGAGTATTGGCAAACCAGAAGCTACCAGCTCACCAGTGTCTCCCATTATaGACCCGGACCACGTGTCCT +
Preference number: 4 (lower is better)
Translates to: NFRPQRVRVLANQKLPAHQCLPL*TRTTCP
Trigger: AGGACACGTGGTCCGGGTGCATAATGGGAGACACTG...GTGAGCTGGTAGCTTCTGGTTTGCCAATACTCTAACCCTTTGTGGCCTGAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp CCATGTGGGCATCCAGTGGCAGCAGCCAGATGTGTCCTATCAGACTGTGCAGGCCCAGCACTAAAATGGTaGCAGCAATTATGCCTATTA +
Preference number: 4 (lower is better)
Translates to: PCGHPVAAARCVLSDCAGPALKW*QQLCLL
Trigger: TAATAGGCATAATTGCTGGCACCATTTTAGTGCTGG...GCCTGCACAGTCTGATAGGACACATCTGGCTGCTGCCACTGGATGCCCACATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp ACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTCCTCCCAGGTTACCTTaGCAAGAGTTACTTCGAGGT +
Preference number: 4 (lower is better)
Translates to: TRCETPLPLLCSISEGLRPPRLP*QELLRG
Trigger: ACCTCGAAGTAACTCTTGGCAAGGTAACCTGGGAGG...ACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398204.8
ENST00000398209.7
ENST00000426930.5
CDS-3UTR GCA 90 bp AGCAATCTATACTTGAAAACTTTTTCCAAATCTATCTGCCATCTGCCATGTCAACGGCGGCCGTGGCGCTaGAACCTCCACCGCGGCTCA +
Preference number: 4 (lower is better)
Translates to: SNLYLKTFSKSICHLPCQRRPWR*NLHRGS
Trigger: TGAGCCGCGGTGGAGGTTGCAGCGCCACGGCCGCCG...TTGACATGGCAGATGGCAGATAGATTTGGAAAAAGTTTTCAAGTATAGATTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439864.5
CDS-3UTR GCA 90 bp GGCAGTACGTTGTCTCATGTGTCTTTGGTGCACTTGCTTAATCTCAGCAGCACAAGCAGAGTGGGCTCCTaGATCAGCAAACTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: GSTLSHVSLVHLLNLSSTSRVGS*ISKLWR
Trigger: CCTCCACAGTTTGCTGATGCAGGAGCCCACTCTGCT...TGTGCTGCTGAGATTAAGCAAGTGCACCAAAGACACATGAGACAACGTACTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp CCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTTGGAGCTGCATCTTTGTTCTaGATCCGCAGATGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: PAASLFCIRRCGRKAPLGAASLF*IRRCGR
Trigger: TCTCCCACATCTGCGGATGCAGAACAAAGATGCAGC...TCCAAGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp CCATGTGGGCATCCAGTGGCAGCAGCCAGATGTGTCCTATCAGACTGTGCAGGCTTAACGAACCTGAAGTaGAGAGTAGCAGAGAAATGT +
Preference number: 4 (lower is better)
Translates to: PCGHPVAAARCVLSDCAGLTNLK*RVAEKC
Trigger: ACATTTCTCTGCTACTCTGCACTTCAGGTTCGTTAA...GCCTGCACAGTCTGATAGGACACATCTGGCTGCTGCCACTGGATGCCCACATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp TTTCAAAGCATCAGATTCTTTCCCCCACCAGCTGTTAGTGTAACTTCGCAGATGGTAGATGAGGCGCAGTaGCACGATGCTCTGGCGCTC +
Preference number: 4 (lower is better)
Translates to: FQSIRFFPPPAVSVTSQMVDEAQ*HDALAL
Trigger: GAGCGCCAGAGCATCGTGCCACTGCGCCTCATCTAC...CATCTGCGAAGTTACACTAACAGCTGGTGGGGGAAAGAATCTGATGCTTTGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp CCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTTGGAGTCCTCATCAGGAAGTaGAGGCATTGGGTAAGGGTA +
Preference number: 4 (lower is better)
Translates to: PAASLFCIRRCGRKAPLGVLIRK*RHWVRV
Trigger: TACCCTTACCCAATGCCTCCACTTCCTGATGAGGAC...TCCAAGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp ACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTGTCCTCATCAGGAAGTaGAGGCATTGGGTAAGGGTA +
Preference number: 4 (lower is better)
Translates to: TRCETPLPLLCSISEGLRVLIRK*RHWVRV
Trigger: TACCCTTACCCAATGCCTCCACTTCCTGATGAGGAC...ACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398204.8
ENST00000398209.7
ENST00000426930.5
CDS-3UTR CCA 90 bp TCTGAGACAGACACAAAATCACTTCTCTGGTATTTCTGCCAAAAATACATATCTGTGCTGCGGCGGCCGTaGCGCTGCAACCTCCACCGC +
Preference number: 4 (lower is better)
Translates to: SETDTKSLLWYFCQKYISVLRRP*RCNLHR
Trigger: GCGGTGGAGGTTGCAGCGCCACGGCCGCCGCAGCAC...AGATATGTATTTTTGGCAGAAATACCAGAGAAGTGATTTTGTGTCTGTCTCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439864.5
CDS-3UTR CCA 90 bp TCAATCTGTCTGCCCTTCTGTTCTTGGCTTGAGCTATGTGGCAACACTGCCCAAGGAGGACAGTTCATGTaGCCAGTCCACTCCATAAGG +
Preference number: 4 (lower is better)
Translates to: SICLPFCSWLELCGNTAQGGQFM*PVHSIR
Trigger: CCTTATGGAGTGGACTGGCCACATGAACTGTCCTCC...TTGGGCAGTGTTGCCACATAGCTCAAGCCAAGAACAGAAGGGCAGACAGATTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp CCATGTGGGCATCCAGTGGCAGCAGCCAGATGTGTCCTATCAGACTGTGCAGGCCATCTAAATAAAGAGTaGCTGGAGGACAGTTCATGT +
Preference number: 4 (lower is better)
Translates to: PCGHPVAAARCVLSDCAGHLNKE*LEDSSC
Trigger: ACATGAACTGTCCTCCAGCCACTCTTTATTTAGATG...GCCTGCACAGTCTGATAGGACACATCTGGCTGCTGCCACTGGATGCCCACATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp AAGTCCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTCTGCATCCGCAGATGTaGGAGAAAAGCTCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: KSCCIFVLHPQMWEKSSSLHPQM*EKSSSW
Trigger: CCAAGAGGAGCTTTTCTCCCACATCTGCGGATGCAG...AGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp TATCTGCTTAATTTACTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTTTTCGCCCGAGCGGTAGATaGGGCGCAGTGGCACGATGC +
Preference number: 4 (lower is better)
Translates to: YLLNLLLTLFAQDLGVPFRPSGR*GAVARC
Trigger: GCATCGTGCCACTGCGCCTCATCTACCGCTCGGGCG...AAAAGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATTAAGCAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR TCA 90 bp GTAACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCTTAGAACTAGATGCTaGGTTTGTGCTGACTCCGGG +
Preference number: 4 (lower is better)
Translates to: VTRCETPLPLLCSISEGLLRTRC*VCADSG
Trigger: CCCGGAGTCAGCACAAACTCAGCATCTAGTTCTAAG...AAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426930.5
CDS-3UTR TCA 90 bp GGCTCCTGCATCAGCAAACTGTGGAGGCCAGAAGTTTTGCTGGGCATTTTGTTCAATGGTAACCAGATGTaGAACTCCGCTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: GSCISKLWRPEVLLGILFNGNQM*NSASSP
Trigger: AGGAGAGGAAGCGGAGTTTCACATCTGGTTACCATT...GAACAAAATGCCCAGCAAAACTTCTGGCCTCCACAGTTTGCTGATGCAGGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp AGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTAGCAGACCATGTGATTaGGCCCATCAATCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: RCETPLPLLCSISEGLRISRPCD*AHQSPA
Trigger: GGCTGGAGATTGATGGGCTCAATCACATGGTCTGCT...AATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp GTAACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTTCAGAGCAGACCATGTaGTTGAGCCCATCAATCTCC +
Preference number: 4 (lower is better)
Translates to: VTRCETPLPLLCSISEGLSEQTM*LSPSIS
Trigger: GGAGATTGATGGGCTCAATCACATGGTCTGCTCTGA...AAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp TCAATCTGTCTGCCCTTCTGTTCTTGGCTTGAGCTATGTGGCAACACTGCCCAATCAGAGCAGACCATGTaGTTGAGCCCATCAATCTCC +
Preference number: 4 (lower is better)
Translates to: SICLPFCSWLELCGNTAQSEQTM*LSPSIS
Trigger: GGAGATTGATGGGCTCAATCACATGGTCTGCTCTGA...TTGGGCAGTGTTGCCACATAGCTCAAGCCAAGAACAGAAGGGCAGACAGATTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp CCATGTGGGCATCCAGTGGCAGCAGCCAGATGTGTCCTATCAGACTGTGCAGGCTTAAGAGAGTATATCTaGAAACCTGTCTGCAGATTC +
Preference number: 4 (lower is better)
Translates to: PCGHPVAAARCVLSDCAGLREYI*KPVCRF
Trigger: GAATCTGCAGACAGGTTTTCAGATATACTCTCTTAA...GCCTGCACAGTCTGATAGGACACATCTGGCTGCTGCCACTGGATGCCCACATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp ACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTGGACTCATCTCCCAGTaGCTTCCTAAGTTGCATAAG +
Preference number: 4 (lower is better)
Translates to: TRCETPLPLLCSISEGLRGLISQ*LPKLHK
Trigger: CTTATGCAACTTAGGAAGTCACTGGGAGATGAGTCC...ACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp GAAAGCCCTCACCATGTTGCACTGTCCGATGTATTCCTTTCCACAGATTGCATGTGCATCAGGCAGGAGTaGCTGGCCTATTATGGACTG +
Preference number: 4 (lower is better)
Translates to: ESPHHVALSDVFLSTDCMCIRQE*LAYYGL
Trigger: CAGTCCATAATAGGCCAGTCACTCCTGCCTGATGCA...CATGCAATCTGTGGAAAGGAATACATCGGACAGTGCAACATGGTGAGGGCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp GGCAGTACGTTGTCTCATGTGTCTTTGGTGCACTTGCTTAATCTCAGCAGCACATGCATCAGGCAGGAGTaGCTGGCCTATTATGGACTG +
Preference number: 4 (lower is better)
Translates to: GSTLSHVSLVHLLNLSSTCIRQE*LAYYGL
Trigger: CAGTCCATAATAGGCCAGTCACTCCTGCCTGATGCA...TGTGCTGCTGAGATTAAGCAAGTGCACCAAAGACACATGAGACAACGTACTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp TCTATCTGCCATCTGCCATGTCAAATCCTAATTGTGTTATGTAGCAGAAAGGATACAGCCACTGCCGCCTaGATGGTGCTGCCGTCAGCC +
Preference number: 4 (lower is better)
Translates to: SICHLPCQILIVLCSRKDTATAA*MVLPSA
Trigger: GGCTGACGGCAGCACCATGCAGGCGGCAGTGGCTGT...ATCCTTTCTGCTACATAACACAATTAGGATTTGACATGGCAGATGGCAGATAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439864.5
CDS-3UTR GCA 90 bp GACTATCTGCTTAATTTACTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTGTGTCGAGCGCGTCGTaGCGACTTTCGTCTTCGCCG +
Preference number: 4 (lower is better)
Translates to: DYLLNLLLTLFAQDLGVPVSSAS*RLSSSP
Trigger: CGGCGAAGACGAAAGTCGGCACGACGCGCTCGACAC...AGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATTAAGCAGATAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR GCA 90 bp GTAACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCCTCCCAGGTTACCTTaGCAAGAGTTACTTCGAGGT +
Preference number: 4 (lower is better)
Translates to: VTRCETPLPLLCSISEGLPPRLP*QELLRG
Trigger: ACCTCGAAGTAACTCTTGGCAAGGTAACCTGGGAGG...AAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398204.8
ENST00000398209.7
ENST00000426930.5
CDS-3UTR GCA 90 bp AGGTTATTCCTAATCGAAGCTCCGGGTGTCTTGTTAAAAATACAGCAACCACAGGGAGCGAGCGAGTGCTaGATTGGGCGGTTGGCTGTA +
Preference number: 4 (lower is better)
Translates to: RLFLIEAPGVLLKIQQPQGASEC*IGRLAV
Trigger: TACAGCCAACCGCCCAATGCAGCACTCGCTCGCTCC...CTGTGGTTGCTGTATTTTTAACAAGACACCCGGAGCTTCGATTAGGAATAACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398204.8
CDS-3UTR GCA 90 bp AGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGGATCATTTCCAGCCTaGAGCGTTCAGAGGACCATG +
Preference number: 4 (lower is better)
Translates to: RCETPLPLLCSISEGLRIGSFPA*SVQRTM
Trigger: CATGGTCCTCTGAACGCTGCAGGCTGGAAATGATCC...AATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp CCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTTGGATTCCTTTCCACAGATTaGATGTGCCCTGGGGATCAT +
Preference number: 4 (lower is better)
Translates to: PAASLFCIRRCGRKAPLGFLSTD*MCPGDH
Trigger: ATGATCCCCAGGGCACATGCAATCTGTGGAAAGGAA...TCCAAGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp TTTCAAAGCATCAGATTCTTTCCCCCACCAGCTGTTAGTGTAACTTCGCAGATGGCTGGGATGGGCTGCTaGCGCTCAGCCAATTTTCAC +
Preference number: 4 (lower is better)
Translates to: FQSIRFFPPPAVSVTSQMAGMGC*RSANFH
Trigger: GTGAAAATTGGCTGAGCGGCAGCAGCCCATCCCAGC...CATCTGCGAAGTTACACTAACAGCTGGTGGGGGAAAGAATCTGATGCTTTGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp GATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGCCCCCACAGAGCATATaGTATGAGCATGTGCCAACA +
Preference number: 4 (lower is better)
Translates to: DVKLRFLSSVASQRVFVLPPQSI*YEHVPT
Trigger: TGTTGGCACATGCTCATAGCATATGCTCTGTGGGGG...CAATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp GATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGGCTGCATCTTTGTTCTaGATCCGCAGATGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: DVKLRFLSSVASQRVFVLAASLF*IRRCGR
Trigger: TCTCCCACATCTGCGGATGCAGAACAAAGATGCAGC...CAATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp AGCAATCTATACTTGAAAACTTTTTCCAAATCTATCTGCCATCTGCCATGTCAACCACTGCCGCCTGCATaGTGCTGCCGTCAGCCCGCC +
Preference number: 4 (lower is better)
Translates to: SNLYLKTFSKSICHLPCQPLPPA*CCRQPA
Trigger: GGCGGGCTGACGGCAGCACCATGCAGGCGGCAGTGG...TTGACATGGCAGATGGCAGATAGATTTGGAAAAAGTTTTCAAGTATAGATTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439864.5
CDS-3UTR CCA 90 bp AGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTTTGGCTGTAGCTAAGTaGTTTCTAGCGCCTCCCACC +
Preference number: 4 (lower is better)
Translates to: RCETPLPLLCSISEGLRILAVAK*FLAPPT
Trigger: GGTGGGAGGCGCTAGAAACCACTTAGCTACAGCCAA...AATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398204.8
CDS-3UTR CCA 90 bp ACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTCACTCACCCAAACCTTaGCCTGATGGATCGCTTTAT +
Preference number: 4 (lower is better)
Translates to: TRCETPLPLLCSISEGLRHSPKP*PDGSLY
Trigger: ATAAAGCGATCCATCAGGCCAAGGTTTGGGTGAGTG...ACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp GAAAGCCCTCACCATGTTGCACTGTCCGATGTATTCCTTTCCACAGATTGCATGAGATTGCATGTGCCCTaGGGATCATTTCCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: ESPHHVALSDVFLSTDCMRLHVP*GSFPAC
Trigger: GCAGGCTGGAAATGATCCCCAGGGCACATGCAATCT...CATGCAATCTGTGGAAAGGAATACATCGGACAGTGCAACATGGTGAGGGCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp GGCAGTACGTTGTCTCATGTGTCTTTGGTGCACTTGCTTAATCTCAGCAGCACACTGCATCCGCAGATGTaGGAGAAAAGCTCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: GSTLSHVSLVHLLNLSSTLHPQM*EKSSSW
Trigger: CCAAGAGGAGCTTTTCTCCCACATCTGCGGATGCAG...TGTGCTGCTGAGATTAAGCAAGTGCACCAAAGACACATGAGACAACGTACTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp TCAATCTGTCTGCCCTTCTGTTCTTGGCTTGAGCTATGTGGCAACACTGCCCAAGGACTAAATGCCCCATaGTCTCCCAAAGTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: SICLPFCSWLELCGNTAQGLNAP*SPKVLC
Trigger: GCAGAGAACTTTGGGAGACCATGGGGCATTTAGTCC...TTGGGCAGTGTTGCCACATAGCTCAAGCCAAGAACAGAAGGGCAGACAGATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR CAA 72 bp GGCTCCTGCATCAGCAAACTGTGGAGGCCAGAAGTTTaGCTGGGCATTTTGTTCTCTCACTCAACTACTCAC +
Preference number: 4 (lower is better)
Translates to: GSCISKLWRPEV*LGILFSHSTTH
Trigger: GTGAGTAGTTGAGTGAGAGAACAAAATGCCCAGCAAAACTTCTGGCCTCCACAGTTTGCTGATGCAGGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp CCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTTGGAGACATCGAGAATGAATaGCGTTCCAAAGGCATCAAC +
Preference number: 4 (lower is better)
Translates to: PAASLFCIRRCGRKAPLGDIENE*RSKGIN
Trigger: GTTGATGCCTTTGGAACGTCATTCATTCTCGATGTC...TCCAAGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp GATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGGCACGACATCGAGAATaGATGACGTTCCAAAGGCAT +
Preference number: 4 (lower is better)
Translates to: DVKLRFLSSVASQRVFVLARHRE*MTFQRH
Trigger: ATGCCTTTGGAACGTCATTCATTCTCGATGTCGTGC...CAATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp AAGTCCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTCTTTCACTCCAAGAATaGGAGAGCCCATTTGACCTC +
Preference number: 4 (lower is better)
Translates to: KSCCIFVLHPQMWEKSSSLSLQE*ESPFDL
Trigger: GAGGTCAAATGGGCTCTCTCATTCTTGGAGTGAAAG...AGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp CCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTTGGACAGATAGATTTGCAGTaGTTCCATGAGCCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: PAASLFCIRRCGRKAPLGQIDLQ*FHEPGF
Trigger: AAACCCAGGCTCATGGAATCACTGCAAATCTATCTG...TCCAAGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp GATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGAATGGTAACCAGATGTaGAACTCCGCTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: DVKLRFLSSVASQRVFVLNGNQM*NSASSP
Trigger: AGGAGAGGAAGCGGAGTTTCACATCTGGTTACCATT...CAATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398204.8
ENST00000398209.7
ENST00000426930.5
CDS-3UTR TCA 90 bp GAACAAAACTTCAGGCCACAAAGGGTTAGAGTATTGGCAAACCAGAAGCTACCAGACGGATGGGATAGATaGTTTCCAGGGAGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: EQNFRPQRVRVLANQKLPDGWDR*FPGSSP
Trigger: TGGGCTGCTCCCTGGAAATCATCTATCCCATCCGTC...TGGTAGCTTCTGGTTTGCCAATACTCTAACCCTTTGTGGCCTGAAGTTTTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp GAAAGCCCTCACCATGTTGCACTGTCCGATGTATTCCTTTCCACAGATTGCATGGCAACCACAGCAAATTaGAAGCCCTCACCATGTTGC +
Preference number: 4 (lower is better)
Translates to: ESPHHVALSDVFLSTDCMATTAN*KPSPCC
Trigger: GCAACATGGTGAGGGCTTTCAATTTGCTGTGGTTGC...CATGCAATCTGTGGAAAGGAATACATCGGACAGTGCAACATGGTGAGGGCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp AGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGGGTTTAAATACCTGTaGTCCAGACTCCCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: RCETPLPLLCSISEGLRIGFKYL*SRLPVW
Trigger: CCAGACAGGGAGTCTGGATCACAGGTATTTAAACCC...AATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426930.5
CDS-3UTR GCA 90 bp TTGACACTATTTGCACAGGACCTTGGAGTGCCTTTTTCCATTAGAGGTTCAGACCAGTGTCTCCCATTATaGACCCGGACCACGTGTCCT +
Preference number: 4 (lower is better)
Translates to: LTLFAQDLGVPFSIRGSDQCLPL*TRTTCP
Trigger: AGGACACGTGGTCCGGGTGCATAATGGGAGACACTG...GTCTGAACCTCTAATGGAAAAAGGCACTCCAAGGTCCTGTGCAAATAGTGTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR GCA 90 bp GAAAGCCCTCACCATGTTGCACTGTCCGATGTATTCCTTTCCACAGATTGCATGTCCACAGATTGCATGTaGCCTGGGGATCATTTCCAG +
Preference number: 4 (lower is better)
Translates to: ESPHHVALSDVFLSTDCMSTDCM*PGDHFQ
Trigger: CTGGAAATGATCCCCAGGGCACATGCAATCTGTGGA...CATGCAATCTGTGGAAAGGAATACATCGGACAGTGCAACATGGTGAGGGCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp GATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGAAGCCCTCACCATGTTaGACTGTCCGATGTATTCCT +
Preference number: 4 (lower is better)
Translates to: DVKLRFLSSVASQRVFVLKPSPC*TVRCIP
Trigger: AGGAATACATCGGACAGTGCAACATGGTGAGGGCTT...CAATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp GATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGATATTTACAACACGCTaGCCATGTGGGCATCCAGTG +
Preference number: 4 (lower is better)
Translates to: DVKLRFLSSVASQRVFVLIFTTR*PCGHPV
Trigger: CACTGGATGCCCACATGGGCAGCGTGTTGTAAATAT...CAATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp CCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTTGGATGCCAGGAGAAAAGTTaGTGCATCCAAAACCAGAGT +
Preference number: 4 (lower is better)
Translates to: PAASLFCIRRCGRKAPLGCQEKS*CIQNQS
Trigger: ACTCTGGTTTTGGATGCAGCAACTTTTCTCCTGGCA...TCCAAGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp CCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTTGGATCCTTAGTTCTTCCATaGCAGGAGAAAAGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: PAASLFCIRRCGRKAPLGSLVLP*QEKSCC
Trigger: GCAGCAACTTTTCTCCTGGCATGGAAGAACTAAGGA...TCCAAGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp CCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTTGGACAAACAACCAGAAGTTaGTCCATTTGCGGGACTAAC +
Preference number: 4 (lower is better)
Translates to: PAASLFCIRRCGRKAPLGQTTRS*SICGTN
Trigger: GTTAGTCCCGCAAATGGAGCAACTTCTGGTTGTTTG...TCCAAGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp CCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTTGGATCTCCCAAAGTTCTCTaGTTCTTATCTCCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: PAASLFCIRRCGRKAPLGSPKVL*FLSPPH
Trigger: ATGGGGAGGAGATAAGAAGCAGAGAACTTTGGGAGA...TCCAAGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp GTAACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCAATGTGTGCTCTCCTaGATATCTGGCCTCAGGAAT +
Preference number: 4 (lower is better)
Translates to: VTRCETPLPLLCSISEGLQCVLS*ISGLRN
Trigger: ATTCCTGAGGCCAGATATGCAGGAGAGCACACATTG...AAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp AACTTCAGGCCACAAAGGGTTAGAGTATTGGCAAACCAGAAGCTACCAGCTCACCCTTGTGACAATGTGTaGTCTCCTGCATATCTGGCC +
Preference number: 4 (lower is better)
Translates to: NFRPQRVRVLANQKLPAHPCDNV*SPAYLA
Trigger: GGCCAGATATGCAGGAGAGCACACATTGTCACAAGG...GTGAGCTGGTAGCTTCTGGTTTGCCAATACTCTAACCCTTTGTGGCCTGAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp GGCAGTACGTTGTCTCATGTGTCTTTGGTGCACTTGCTTAATCTCAGCAGCACACCTTGTGACAATGTGTaGTCTCCTGCATATCTGGCC +
Preference number: 4 (lower is better)
Translates to: GSTLSHVSLVHLLNLSSTPCDNV*SPAYLA
Trigger: GGCCAGATATGCAGGAGAGCACACATTGTCACAAGG...TGTGCTGCTGAGATTAAGCAAGTGCACCAAAGACACATGAGACAACGTACTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp AAGTCCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTCTAGTGCCGACCTACTaGTGGCTAACATGTAAGCTA +
Preference number: 4 (lower is better)
Translates to: KSCCIFVLHPQMWEKSSSLVPTY*WLTCKL
Trigger: TAGCTTACATGTTAGCCAGCAGTAGGTCGGCACTAG...AGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp GTAACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTTCTAAGCACATCATTTaGGGACCACAAGGTGTCCCA +
Preference number: 4 (lower is better)
Translates to: VTRCETPLPLLCSISEGLSKHII*GPQGVP
Trigger: TGGGACACCTTGTGGTCCCCAAATGATGTGCTTAGA...AAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398204.8
ENST00000398209.7
ENST00000426930.5
CDS-3UTR CCA 90 bp ACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTAGGAAGTGGAGGCATTaGGTAAGGGTATTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: TRCETPLPLLCSISEGLRRKWRH*VRVFSA
Trigger: AGCAGAAAATACCCTTACCCAATGCCTCCACTTCCT...ACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398204.8
ENST00000398209.7
ENST00000426930.5
CDS-3UTR CCA 90 bp GATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGATGTCTCCCATAGCCTaGCACTTTGTCGGTTCACTT +
Preference number: 4 (lower is better)
Translates to: DVKLRFLSSVASQRVFVLMSPIA*HFVGSL
Trigger: AAGTGAACCGACAAAGTGCCAGGCTATGGGAGACAT...CAATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398204.8
ENST00000398209.7
ENST00000426930.5
CDS-3UTR CCA 90 bp GTAACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTATGTCTCCCATAGCCTaGCACTTTGTCGGTTCACTT +
Preference number: 4 (lower is better)
Translates to: VTRCETPLPLLCSISEGLMSPIA*HFVGSL
Trigger: AAGTGAACCGACAAAGTGCCAGGCTATGGGAGACAT...AAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398204.8
ENST00000398209.7
ENST00000426930.5
CDS-3UTR CCA 90 bp AAGTCCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTAAGCTACCAGCTCACTaGCAGTACGTTGTCTCATGT +
Preference number: 4 (lower is better)
Translates to: KSCCIFVLHPQMWEKSSSKLPAH*QYVVSC
Trigger: ACATGAGACAACGTACTGCCAGTGAGCTGGTAGCTT...AGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp CCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTTGGACTGCTAATGTGCCAGTaGGTGAAGATAAAGATGCCT +
Preference number: 4 (lower is better)
Translates to: PAASLFCIRRCGRKAPLGLLMCQ*VKIKMP
Trigger: AGGCATCTTTATCTTCACCCACTGGCACATTAGCAG...TCCAAGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp GAACAAAACTTCAGGCCACAAAGGGTTAGAGTATTGGCAAACCAGAAGCTACCATTGGGGGTGCTAGTTTaGAGGGGCAAGTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: EQNFRPQRVRVLANQKLPLGVLV*RGKSSS
Trigger: GCTGGAAGACTTGCCCCTCCAAACTAGCACCCCCAA...TGGTAGCTTCTGGTTTGCCAATACTCTAACCCTTTGTGGCCTGAAGTTTTGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp TCAATCTGTCTGCCCTTCTGTTCTTGGCTTGAGCTATGTGGCAACACTGCCCAAGTGCCGACCTACTGCTaGCTAACATGTAAGCTACTA +
Preference number: 4 (lower is better)
Translates to: SICLPFCSWLELCGNTAQVPTYC*LTCKLL
Trigger: TAGTAGCTTACATGTTAGCCAGCAGTAGGTCGGCAC...TTGGGCAGTGTTGCCACATAGCTCAAGCCAAGAACAGAAGGGCAGACAGATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp GATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGGTGCCGACCTACTGCTaGCTAACATGTAAGCTACTA +
Preference number: 4 (lower is better)
Translates to: DVKLRFLSSVASQRVFVLVPTYC*LTCKLL
Trigger: TAGTAGCTTACATGTTAGCCAGCAGTAGGTCGGCAC...CAATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR CAA 72 bp TGGCAAACCAGAAGCTACCAGCTCACTGGCAGTACGTaGTCTCATGTGTCTTTGGTGCACTTGCTTAATCTC +
Preference number: 4 (lower is better)
Translates to: WQTRSYQLTGST*SHVSLVHLLNL
Trigger: GAGATTAAGCAAGTGCACCAAAGACACATGAGACAACGTACTGCCAGTGAGCTGGTAGCTTCTGGTTTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR CAA 72 bp TACATCTTTCAATCTGTCTGCCCTTCTGTTCTTGGCTaGAGCTATGTGGCAACACTGCCCAACACTCACCCA +
Preference number: 4 (lower is better)
Translates to: YIFQSVCPSVLG*SYVATLPNTHP
Trigger: TGGGTGAGTGTTGGGCAGTGTTGCCACATAGCTCAAGCCAAGAACAGAAGGGCAGACAGATTGAAAGATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp AAGTCCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTTTTCTTCTGGCTCAATaGGATATGTGTGGTTCCCGT +
Preference number: 4 (lower is better)
Translates to: KSCCIFVLHPQMWEKSSSFLLAQ*DMCGSR
Trigger: ACGGGAACCACACATATCTCATTGAGCCAGAAGAAA...AGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp CTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGTCTGAAGAGCAGATAGATCCTCTCCAGTTTCAATaGAGCCATTGCCACACTCAG +
Preference number: 4 (lower is better)
Translates to: LSSVASQRVFVLSEEQIDPLQFQ*SHCHTQ
Trigger: CTGAGTGTGGCAATGGCTTCATTGAAACTGGAGAGG...ATCTATCTGCTCTTCAGACAATACGAAGACCCTCTGAGATGCTACAGAGGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp TCAATCTGTCTGCCCTTCTGTTCTTGGCTTGAGCTATGTGGCAACACTGCCCAACATTGCCAGACAGAGTaGTACCAGTCTTTGCATCAT +
Preference number: 4 (lower is better)
Translates to: SICLPFCSWLELCGNTAQHCQTE*YQSLHH
Trigger: ATGATGCAAAGACTGGTATCACTCTGTCTGGCAATG...TTGGGCAGTGTTGCCACATAGCTCAAGCCAAGAACAGAAGGGCAGACAGATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp CCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTTGGACAGTTATTCCTAATATaGGGGCCAGCACTAAAATGG +
Preference number: 4 (lower is better)
Translates to: PAASLFCIRRCGRKAPLGQLFLI*GPALKW
Trigger: CCATTTTAGTGCTGGCCCTCATATTAGGAATAACTG...TCCAAGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp CTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTTTTTCCATTAGAGGTTCAATGCTGAGTTTGTGCTaGCTCCGGGAGGAATGTCGC +
Preference number: 4 (lower is better)
Translates to: LLTLFAQDLGVPFSIRGSMLSLC*LREECR
Trigger: GCGACATTCCTCCCGGAGTCAGCACAAACTCAGCAT...TGAACCTCTAATGGAAAAAGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR TCA 90 bp TCAATCTGTCTGCCCTTCTGTTCTTGGCTTGAGCTATGTGGCAACACTGCCCAACATTACTGTTTACAGTaGGGATGTGCCTCAGAACGT +
Preference number: 4 (lower is better)
Translates to: SICLPFCSWLELCGNTAQHYCLQ*GCASER
Trigger: ACGTTCTGAGGCACATCCTCACTGTAAACAGTAATG...TTGGGCAGTGTTGCCACATAGCTCAAGCCAAGAACAGAAGGGCAGACAGATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp GTAACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTAGAGTCAGTGCAGAATaGCTTGTTGGGATTCACATC +
Preference number: 4 (lower is better)
Translates to: VTRCETPLPLLCSISEGLRVSAE*LVGIHI
Trigger: GATGTGAATCCCAACAAGTCATTCTGCACTGACTCT...AAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp GAAAGCCCTCACCATGTTGCACTGTCCGATGTATTCCTTTCCACAGATTGCATGTACCAACTGGTAGGGTaGTATTTACAACACGCTGCC +
Preference number: 4 (lower is better)
Translates to: ESPHHVALSDVFLSTDCMYQLVG*YLQHAA
Trigger: GGCAGCGTGTTGTAAATATCACCCTACCAGTTGGTA...CATGCAATCTGTGGAAAGGAATACATCGGACAGTGCAACATGGTGAGGGCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp GGCAGTACGTTGTCTCATGTGTCTTTGGTGCACTTGCTTAATCTCAGCAGCACATACCAACTGGTAGGGTaGTATTTACAACACGCTGCC +
Preference number: 4 (lower is better)
Translates to: GSTLSHVSLVHLLNLSSTYQLVG*YLQHAA
Trigger: GGCAGCGTGTTGTAAATATCACCCTACCAGTTGGTA...TGTGCTGCTGAGATTAAGCAAGTGCACCAAAGACACATGAGACAACGTACTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp AGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGGACTCATCTCCCAGTaGCTTCCTAAGTTGCATAAG +
Preference number: 4 (lower is better)
Translates to: RCETPLPLLCSISEGLRIGLISQ*LPKLHK
Trigger: CTTATGCAACTTAGGAAGTCACTGGGAGATGAGTCC...AATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp ACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATGATACAGGTTTTATaGACAGTGCAACAGGGATGC +
Preference number: 4 (lower is better)
Translates to: TRCETPLPLLCSISEGLRMIQVL*TVQQGC
Trigger: GCATCCCTGTTGCACTGTTCATAAAACCTGTATCAT...ACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp TTCTTTGACTATCTGCTTAATTTACTTTTGACACTATTTGCACAGGACCTTGGAACAGCCACTGCCGCCTaGATGGTGCTGCCGTCAGCC +
Preference number: 4 (lower is better)
Translates to: FFDYLLNLLLTLFAQDLGTATAA*MVLPSA
Trigger: GGCTGACGGCAGCACCATGCAGGCGGCAGTGGCTGT...TCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATTAAGCAGATAGTCAAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR GCA 90 bp TCTGAGACAGACACAAAATCACTTCTCTGGTATTTCTGCCAAAAATACATATCTCACGGACACAGCCACTaGCGCCTGCATGGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: SETDTKSLLWYFCQKYISHGHSH*RLHGAA
Trigger: GGCAGCACCATGCAGGCGGCAGTGGCTGTGTCCGTG...AGATATGTATTTTTGGCAGAAATACCAGAGAAGTGATTTTGTGTCTGTCTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439864.5
CDS-3UTR GCA 90 bp TTCTTTGACTATCTGCTTAATTTACTTTTGACACTATTTGCACAGGACCTTGGAGGCGCAGTGGCACGATaGTCTGGCGCTCCACGAAGC +
Preference number: 4 (lower is better)
Translates to: FFDYLLNLLLTLFAQDLGGAVAR*SGAPRS
Trigger: GCTTCGTGGAGCGCCAGAGCATCGTGCCACTGCGCC...TCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATTAAGCAGATAGTCAAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR GCA 90 bp AGCAATCTATACTTGAAAACTTTTTCCAAATCTATCTGCCATCTGCCATGTCAAGGCGCAGTGGCACGATaGTCTGGCGCTCCACGAAGC +
Preference number: 4 (lower is better)
Translates to: SNLYLKTFSKSICHLPCQGAVAR*SGAPRS
Trigger: GCTTCGTGGAGCGCCAGAGCATCGTGCCACTGCGCC...TTGACATGGCAGATGGCAGATAGATTTGGAAAAAGTTTTCAAGTATAGATTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439864.5
CDS-3UTR GCA 90 bp CCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTTGGAATCAACCTGGAAGCTTaGTTGGTCAACATGAGTCAA +
Preference number: 4 (lower is better)
Translates to: PAASLFCIRRCGRKAPLGINLEA*LVNMSQ
Trigger: TTGACTCATGTTGACCAAGCAAGCTTCCAGGTTGAT...TCCAAGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp TTACTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTTTTTCCATTAGAGGTCCCACCAATATAAGCTaGCCCGCTCCGGCTACTCTC +
Preference number: 4 (lower is better)
Translates to: LLLTLFAQDLGVPFSIRGPTNIS*PAPATL
Trigger: GAGAGTAGCCGGAGCGGGGCAGCTTATATTGGTGGG...ACCTCTAATGGAAAAAGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR GCA 90 bp ATAGCATTAGCCTTTTGTACACTCAGTACCAGGAAACATTCAGTGCACGTTACACCCACCAATATAAGCTaGCCCGCTCCGGCTACTCTC +
Preference number: 4 (lower is better)
Translates to: IALAFCTLSTRKHSVHVTPTNIS*PAPATL
Trigger: GAGAGTAGCCGGAGCGGGGCAGCTTATATTGGTGGG...TGTAACGTGCACTGAATGTTTCCTGGTACTGAGTGTACAAAAGGCTAATGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp TCAATCTGTCTGCCCTTCTGTTCTTGGCTTGAGCTATGTGGCAACACTGCCCAAAGCAAAGACCGTCACTaGATTGAGAGTCTTGAGTCA +
Preference number: 4 (lower is better)
Translates to: SICLPFCSWLELCGNTAQSKDRH*IESLES
Trigger: TGACTCAAGACTCTCAATGCAGTGACGGTCTTTGCT...TTGGGCAGTGTTGCCACATAGCTCAAGCCAAGAACAGAAGGGCAGACAGATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp GTAACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTAGCAAAGACCGTCACTaGATTGAGAGTCTTGAGTCA +
Preference number: 4 (lower is better)
Translates to: VTRCETPLPLLCSISEGLSKDRH*IESLES
Trigger: TGACTCAAGACTCTCAATGCAGTGACGGTCTTTGCT...AAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp AAGTCCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTATCACAATCATTTACTaGTTCTCGGCACACAGTGCC +
Preference number: 4 (lower is better)
Translates to: KSCCIFVLHPQMWEKSSSITIIY*FSAHSA
Trigger: GGCACTGTGTGCCGAGAAGCAGTAAATGATTGTGAT...AGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp GTAACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTGCACATCCCGTTTGTTaGACTGTATCCATGTGTCTT +
Preference number: 4 (lower is better)
Translates to: VTRCETPLPLLCSISEGLAHPVC*TVSMCL
Trigger: AAGACACATGGATACAGTGCAACAAACGGGATGTGC...AAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp TCTATCTGCCATCTGCCATGTCAAATCCTAATTGTGTTATGTAGCAGAAAGGATTCCACCGCGGCTCAGTaGTGCATTGTGCTTCGCGGA +
Preference number: 4 (lower is better)
Translates to: SICHLPCQILIVLCSRKDSTAAQ*CIVLRG
Trigger: TCCGCGAAGCACAATGCAGCACTGAGCCGCGGTGGA...ATCCTTTCTGCTACATAACACAATTAGGATTTGACATGGCAGATGGCAGATAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439864.5
CDS-3UTR GCA 90 bp CCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTTGGATTTACAGTGAGGATGTaGCTCAGAACGTCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: PAASLFCIRRCGRKAPLGFTVRM*LRTSSS
Trigger: AGAACTTGACGTTCTGAGGCACATCCTCACTGTAAA...TCCAAGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp ACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTCAGAAAAATCCTATATaGCTTAGCCCTGCATGCTCA +
Preference number: 4 (lower is better)
Translates to: TRCETPLPLLCSISEGLRQKNPI*LSPACS
Trigger: TGAGCATGCAGGGCTAAGGCATATAGGATTTTTCTG...ACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp GGCTCCTGCATCAGCAAACTGTGGAGGCCAGAAGTTTTGCTGGGCATTTTGTTCCAGAAAAATCCTATATaGCTTAGCCCTGCATGCTCA +
Preference number: 4 (lower is better)
Translates to: GSCISKLWRPEVLLGILFQKNPI*LSPACS
Trigger: TGAGCATGCAGGGCTAAGGCATATAGGATTTTTCTG...GAACAAAATGCCCAGCAAAACTTCTGGCCTCCACAGTTTGCTGATGCAGGAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp GGCAGTACGTTGTCTCATGTGTCTTTGGTGCACTTGCTTAATCTCAGCAGCACATTCCTTTCCACAGATTaGATGTGCCCTGGGGATCAT +
Preference number: 4 (lower is better)
Translates to: GSTLSHVSLVHLLNLSSTFLSTD*MCPGDH
Trigger: ATGATCCCCAGGGCACATGCAATCTGTGGAAAGGAA...TGTGCTGCTGAGATTAAGCAAGTGCACCAAAGACACATGAGACAACGTACTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp TTTCAAAGCATCAGATTCTTTCCCCCACCAGCTGTTAGTGTAACTTCGCAGATGTGTCCTATCAGACTGTaGAGGCAGCTGTCTTGTCCC +
Preference number: 4 (lower is better)
Translates to: FQSIRFFPPPAVSVTSQMCPIRL*RQLSCP
Trigger: GGGACAAGACAGCTGCCTGCACAGTCTGATAGGACA...CATCTGCGAAGTTACACTAACAGCTGGTGGGGGAAAGAATCTGATGCTTTGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp CATGCCAGGAGAAAAGTTGCTGCATCCAAAACCAGAGTAGTCTTATCCATTCAAACAGCTGGGATGGGCTaGTGCCGCTCAGCCAATTTT +
Preference number: 4 (lower is better)
Translates to: HARRKVAASKTRVVLSIQTAGMG*CRSANF
Trigger: AAAATTGGCTGAGCGGCAGCAGCCCATCCCAGCTGT...TTGAATGGATAAGACTACTCTGGTTTTGGATGCAGCAACTTTTCTCCTGGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp ACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTAGAAGTTGCTCCATTTaGGGGACTAACAAAGCAATG +
Preference number: 4 (lower is better)
Translates to: TRCETPLPLLCSISEGLRRSCSI*GTNKAM
Trigger: CATTGCTTTGTTAGTCCCGCAAATGGAGCAACTTCT...ACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp GAAAGCCCTCACCATGTTGCACTGTCCGATGTATTCCTTTCCACAGATTGCATGGAAGATAAAGATGCCTaGCACCTCTACTCCCTAGAG +
Preference number: 4 (lower is better)
Translates to: ESPHHVALSDVFLSTDCMEDKDA*HLYSLE
Trigger: CTCTAGGGAGTAGAGGTGGCAGGCATCTTTATCTTC...CATGCAATCTGTGGAAAGGAATACATCGGACAGTGCAACATGGTGAGGGCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp AACTTCAGGCCACAAAGGGTTAGAGTATTGGCAAACCAGAAGCTACCAGCTCACTATGCCAGGACTAAATaGCCCATGGTCTCCCAAAGT +
Preference number: 4 (lower is better)
Translates to: NFRPQRVRVLANQKLPAHYARTK*PMVSQS
Trigger: ACTTTGGGAGACCATGGGGCATTTAGTCCTGGCATA...GTGAGCTGGTAGCTTCTGGTTTGCCAATACTCTAACCCTTTGTGGCCTGAAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp TTACTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTTTTTCCATTAGAGGTAGTGGCACGATGCTCTaGCGCTCCACGAAGCGGTTT +
Preference number: 4 (lower is better)
Translates to: LLLTLFAQDLGVPFSIRGSGTML*RSTKRF
Trigger: AAACCGCTTCGTGGAGCGCCAGAGCATCGTGCCACT...ACCTCTAATGGAAAAAGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR CCA 90 bp CCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTTGGATTATGGGCTAATGACTaGGCAAGTGTAACAGCCATT +
Preference number: 4 (lower is better)
Translates to: PAASLFCIRRCGRKAPLGLWAND*ASVTAI
Trigger: AATGGCTGTTACACTTGCCCAGTCATTAGCCCATAA...TCCAAGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp GGCAGTACGTTGTCTCATGTGTCTTTGGTGCACTTGCTTAATCTCAGCAGCACATCTAAGCACATCATTTaGGGACCACAAGGTGTCCCA +
Preference number: 4 (lower is better)
Translates to: GSTLSHVSLVHLLNLSSTSKHII*GPQGVP
Trigger: TGGGACACCTTGTGGTCCCCAAATGATGTGCTTAGA...TGTGCTGCTGAGATTAAGCAAGTGCACCAAAGACACATGAGACAACGTACTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp AGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGGGCCAGCACTAAAATaGTGCCAGCAATTATGCCTA +
Preference number: 4 (lower is better)
Translates to: RCETPLPLLCSISEGLRIGPALK*CQQLCL
Trigger: TAGGCATAATTGCTGGCACCATTTTAGTGCTGGCCC...AATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398204.8
ENST00000398209.7
ENST00000426930.5
CDS-3UTR CCA 90 bp AAGTCCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTAGGAAGTGGAGGCATTaGGTAAGGGTATTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: KSCCIFVLHPQMWEKSSSRKWRH*VRVFSA
Trigger: AGCAGAAAATACCCTTACCCAATGCCTCCACTTCCT...AGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp GGCTCCTGCATCAGCAAACTGTGGAGGCCAGAAGTTTTGCTGGGCATTTTGTTCAAAGGGTTAGAGTATTaGCAAACCAGAAGCTACCAG +
Preference number: 4 (lower is better)
Translates to: GSCISKLWRPEVLLGILFKGLEY*QTRSYQ
Trigger: CTGGTAGCTTCTGGTTTGCCAATACTCTAACCCTTT...GAACAAAATGCCCAGCAAAACTTCTGGCCTCCACAGTTTGCTGATGCAGGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp GGCAGTACGTTGTCTCATGTGTCTTTGGTGCACTTGCTTAATCTCAGCAGCACATGCCAGTTCCTAACTTaGCTCTCCCCTTCCATATAC +
Preference number: 4 (lower is better)
Translates to: GSTLSHVSLVHLLNLSSTCQFLT*LSPSIY
Trigger: GTATATGGAAGGGGAGAGCCAAGTTAGGAACTGGCA...TGTGCTGCTGAGATTAAGCAAGTGCACCAAAGACACATGAGACAACGTACTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp GTAACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCTGCTAATGTGCCAGTaGGTGAAGATAAAGATGCCT +
Preference number: 4 (lower is better)
Translates to: VTRCETPLPLLCSISEGLLLMCQ*VKIKMP
Trigger: AGGCATCTTTATCTTCACCCACTGGCACATTAGCAG...AAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp GAACAAAACTTCAGGCCACAAAGGGTTAGAGTATTGGCAAACCAGAAGCTACCATCAGGCAGGAGTGACTaGCCTATTATGGACTGGACC +
Preference number: 4 (lower is better)
Translates to: EQNFRPQRVRVLANQKLPSGRSD*PIMDWT
Trigger: GGTCCAGTCCATAATAGGCCAGTCACTCCTGCCTGA...TGGTAGCTTCTGGTTTGCCAATACTCTAACCCTTTGTGGCCTGAAGTTTTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp GAAAGCCCTCACCATGTTGCACTGTCCGATGTATTCCTTTCCACAGATTGCATGGACATCGAGAATGAATaGCGTTCCAAAGGCATCAAC +
Preference number: 4 (lower is better)
Translates to: ESPHHVALSDVFLSTDCMDIENE*RSKGIN
Trigger: GTTGATGCCTTTGGAACGTCATTCATTCTCGATGTC...CATGCAATCTGTGGAAAGGAATACATCGGACAGTGCAACATGGTGAGGGCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp AAGTCCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTGCAAACTCCATTTCCTaGGCAAATAGTGCCTTCTTT +
Preference number: 4 (lower is better)
Translates to: KSCCIFVLHPQMWEKSSSANSIS*ANSAFF
Trigger: AAAGAAGGCACTATTTGCTCAGGAAATGGAGTTTGC...AGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp GTAACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTGCAAACTCCATTTCCTaGGCAAATAGTGCCTTCTTT +
Preference number: 4 (lower is better)
Translates to: VTRCETPLPLLCSISEGLANSIS*ANSAFF
Trigger: AAAGAAGGCACTATTTGCTCAGGAAATGGAGTTTGC...AAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398204.8
ENST00000398209.7
ENST00000426930.5
CDS-3UTR TCA 90 bp ACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTCAATTATGCCTATTATaGTATTGGTGCCAGCAACAC +
Preference number: 4 (lower is better)
Translates to: TRCETPLPLLCSISEGLRQLCLL*YWCQQH
Trigger: GTGTTGCTGGCACCAATATCATAATAGGCATAATTG...ACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398204.8
ENST00000398209.7
ENST00000426930.5
CDS-3UTR TCA 90 bp GTAACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTATGAGAGAGCCCATTTaGCCTCTTCTTAGAACTAGA +
Preference number: 4 (lower is better)
Translates to: VTRCETPLPLLCSISEGLMREPI*PLLRTR
Trigger: TCTAGTTCTAAGAAGAGGTCAAATGGGCTCTCTCAT...AAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426930.5
CDS-3UTR TCA 90 bp CTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGTCTGAAGAGCAGATAGATCTTTCACTCCAAGAATaGGAGAGCCCATTTGACCTC +
Preference number: 4 (lower is better)
Translates to: LSSVASQRVFVLSEEQIDLSLQE*ESPFDL
Trigger: GAGGTCAAATGGGCTCTCTCATTCTTGGAGTGAAAG...ATCTATCTGCTCTTCAGACAATACGAAGACCCTCTGAGATGCTACAGAGGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398204.8
ENST00000398209.7
ENST00000426930.5
CDS-3UTR TCA 90 bp AGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTAGAGTCAGTGCAGAATaGCTTGTTGGGATTCACATC +
Preference number: 4 (lower is better)
Translates to: RCETPLPLLCSISEGLRIRVSAE*LVGIHI
Trigger: GATGTGAATCCCAACAAGTCATTCTGCACTGACTCT...AATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp TCAATCTGTCTGCCCTTCTGTTCTTGGCTTGAGCTATGTGGCAACACTGCCCAACCCTTTATGAATGGTTaGAGCTGCTCAACTCAAACA +
Preference number: 4 (lower is better)
Translates to: SICLPFCSWLELCGNTAQPFMNG*SCSTQT
Trigger: TGTTTGAGTTGAGCAGCTTCAACCATTCATAAAGGG...TTGGGCAGTGTTGCCACATAGCTCAAGCCAAGAACAGAAGGGCAGACAGATTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp GAACAAAACTTCAGGCCACAAAGGGTTAGAGTATTGGCAAACCAGAAGCTACCACTTCTGTTCTTGGCTTaGGCTATGTGGCAACACTGC +
Preference number: 4 (lower is better)
Translates to: EQNFRPQRVRVLANQKLPLLFLA*AMWQHC
Trigger: GCAGTGTTGCCACATAGCTCAAGCCAAGAACAGAAG...TGGTAGCTTCTGGTTTGCCAATACTCTAACCCTTTGTGGCCTGAAGTTTTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp GATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGATGATACAGGTTTTATaGACAGTGCAACAGGGATGC +
Preference number: 4 (lower is better)
Translates to: DVKLRFLSSVASQRVFVLMIQVL*TVQQGC
Trigger: GCATCCCTGTTGCACTGTTCATAAAACCTGTATCAT...CAATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp AGCAATCTATACTTGAAAACTTTTTCCAAATCTATCTGCCATCTGCCATGTCAAGTGTCGAGCGCGTCGTaGCGACTTTCGTCTTCGCCG +
Preference number: 4 (lower is better)
Translates to: SNLYLKTFSKSICHLPCQVSSAS*RLSSSP
Trigger: CGGCGAAGACGAAAGTCGGCACGACGCGCTCGACAC...TTGACATGGCAGATGGCAGATAGATTTGGAAAAAGTTTTCAAGTATAGATTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439864.5
CDS-3UTR GCA 90 bp TCAATCTGTCTGCCCTTCTGTTCTTGGCTTGAGCTATGTGGCAACACTGCCCAAATCAACCTGGAAGCTTaGTTGGTCAACATGAGTCAA +
Preference number: 4 (lower is better)
Translates to: SICLPFCSWLELCGNTAQINLEA*LVNMSQ
Trigger: TTGACTCATGTTGACCAAGCAAGCTTCCAGGTTGAT...TTGGGCAGTGTTGCCACATAGCTCAAGCCAAGAACAGAAGGGCAGACAGATTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp GGCTCCTGCATCAGCAAACTGTGGAGGCCAGAAGTTTTGCTGGGCATTTTGTTCGTCTATCTCTGGTTTTaGATCTTCCTCCAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: GSCISKLWRPEVLLGILFVYLWF*IFLQSK
Trigger: TTTGCTTTGGAGGAAGATGCAAAACCAGAGATAGAC...GAACAAAATGCCCAGCAAAACTTCTGGCCTCCACAGTTTGCTGATGCAGGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp GAAAGCCCTCACCATGTTGCACTGTCCGATGTATTCCTTTCCACAGATTGCATGGCACATCCCGTTTGTTaGACTGTATCCATGTGTCTT +
Preference number: 4 (lower is better)
Translates to: ESPHHVALSDVFLSTDCMAHPVC*TVSMCL
Trigger: AAGACACATGGATACAGTGCAACAAACGGGATGTGC...CATGCAATCTGTGGAAAGGAATACATCGGACAGTGCAACATGGTGAGGGCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp GTAACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTACTTCAGCTCATTACTaGAAACTCCATTTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: VTRCETPLPLLCSISEGLTSAHY*KLHFLS
Trigger: GCTCAGGAAATGGAGTTTGCAGTAATGAGCTGAAGT...AAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398204.8
ENST00000398209.7
ENST00000426930.5
CDS-3UTR GCA 90 bp TCAATCTGTCTGCCCTTCTGTTCTTGGCTTGAGCTATGTGGCAACACTGCCCAAGAGGGAAGTAAGTGTTaGAATCAGAACCTATCCAGT +
Preference number: 4 (lower is better)
Translates to: SICLPFCSWLELCGNTAQEGSKC*NQNLSS
Trigger: ACTGGATAGGTTCTGATTGCAACACTTACTTCCCTC...TTGGGCAGTGTTGCCACATAGCTCAAGCCAAGAACAGAAGGGCAGACAGATTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp GGCTCCTGCATCAGCAAACTGTGGAGGCCAGAAGTTTTGCTGGGCATTTTGTTCAGTGATACCAGTCTTTaGATCATCATTGTGAGGGAA +
Preference number: 4 (lower is better)
Translates to: GSCISKLWRPEVLLGILFSDTSL*IIIVRE
Trigger: TTCCCTCACAATGATGATGCAAAGACTGGTATCACT...GAACAAAATGCCCAGCAAAACTTCTGGCCTCCACAGTTTGCTGATGCAGGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp TCTATCTGCCATCTGCCATGTCAAATCCTAATTGTGTTATGTAGCAGAAAGGATCTCAGTGCTGCATTGTaGTTCGCGGACGCTTCCGCT +
Preference number: 4 (lower is better)
Translates to: SICHLPCQILIVLCSRKDLSAAL*FADASA
Trigger: AGCGGAAGCGTCCGCGAAGCACAATGCAGCACTGAG...ATCCTTTCTGCTACATAACACAATTAGGATTTGACATGGCAGATGGCAGATAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439864.5
CDS-3UTR GCA 90 bp AGCAATCTATACTTGAAAACTTTTTCCAAATCTATCTGCCATCTGCCATGTCAAACCGCGGCTCAGTGCTaGATTGTGCTTCGCGGACGC +
Preference number: 4 (lower is better)
Translates to: SNLYLKTFSKSICHLPCQTAAQC*IVLRGR
Trigger: GCGTCCGCGAAGCACAATGCAGCACTGAGCCGCGGT...TTGACATGGCAGATGGCAGATAGATTTGGAAAAAGTTTTCAAGTATAGATTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439864.5
CDS-3UTR GCA 90 bp TCAATCTGTCTGCCCTTCTGTTCTTGGCTTGAGCTATGTGGCAACACTGCCCAATGCCTTAGCCCTGCATaGTCATTTCTATTATGGGAT +
Preference number: 4 (lower is better)
Translates to: SICLPFCSWLELCGNTAQCLSPA*SFLLWD
Trigger: ATCCCATAATAGAAATGAGCATGCAGGGCTAAGGCA...TTGGGCAGTGTTGCCACATAGCTCAAGCCAAGAACAGAAGGGCAGACAGATTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp AACTTCAGGCCACAAAGGGTTAGAGTATTGGCAAACCAGAAGCTACCAGCTCACTGCCAGGAGAAAAGTTaGTGCATCCAAAACCAGAGT +
Preference number: 4 (lower is better)
Translates to: NFRPQRVRVLANQKLPAHCQEKS*CIQNQS
Trigger: ACTCTGGTTTTGGATGCAGCAACTTTTCTCCTGGCA...GTGAGCTGGTAGCTTCTGGTTTGCCAATACTCTAACCCTTTGTGGCCTGAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp TTTCAAAGCATCAGATTCTTTCCCCCACCAGCTGTTAGTGTAACTTCGCAGATGCCCCCACAGAGCATATaGTATGAGCATGTGCCAACA +
Preference number: 4 (lower is better)
Translates to: FQSIRFFPPPAVSVTSQMPPQSI*YEHVPT
Trigger: TGTTGGCACATGCTCATAGCATATGCTCTGTGGGGG...CATCTGCGAAGTTACACTAACAGCTGGTGGGGGAAAGAATCTGATGCTTTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp AGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTCAAACAACCAGAAGTTaGTCCATTTGCGGGACTAAC +
Preference number: 4 (lower is better)
Translates to: RCETPLPLLCSISEGLRIQTTRS*SICGTN
Trigger: GTTAGTCCCGCAAATGGAGCAACTTCTGGTTGTTTG...AATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp GGCAGTACGTTGTCTCATGTGTCTTTGGTGCACTTGCTTAATCTCAGCAGCACAAGGTTTTATGAACAGTaGAACAGGGATGCATCAGGC +
Preference number: 4 (lower is better)
Translates to: GSTLSHVSLVHLLNLSSTRFYEQ*NRDASG
Trigger: GCCTGATGCATCCCTGTTGCACTGTTCATAAAACCT...TGTGCTGCTGAGATTAAGCAAGTGCACCAAAGACACATGAGACAACGTACTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp GAAAGCCCTCACCATGTTGCACTGTCCGATGTATTCCTTTCCACAGATTGCATGAGGTTTTATGAACAGTaGAACAGGGATGCATCAGGC +
Preference number: 4 (lower is better)
Translates to: ESPHHVALSDVFLSTDCMRFYEQ*NRDASG
Trigger: GCCTGATGCATCCCTGTTGCACTGTTCATAAAACCT...CATGCAATCTGTGGAAAGGAATACATCGGACAGTGCAACATGGTGAGGGCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp ACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTTCCACTATCTATAGATaGACATCACCTGTCAAAGGT +
Preference number: 4 (lower is better)
Translates to: TRCETPLPLLCSISEGLRSTIYR*TSPVKG
Trigger: ACCTTTGACAGGTGATGTGCATCTATAGATAGTGGA...ACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp ACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTTTAACGAACCTGAAGTaGAGAGTAGCAGAGAAATGT +
Preference number: 4 (lower is better)
Translates to: TRCETPLPLLCSISEGLRLTNLK*RVAEKC
Trigger: ACATTTCTCTGCTACTCTGCACTTCAGGTTCGTTAA...ACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp GTAACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTGCTCAGGAAAGCAGTTaGCATATACATTTCCATTGG +
Preference number: 4 (lower is better)
Translates to: VTRCETPLPLLCSISEGLAQESS*HIHFHW
Trigger: CCAATGGAAATGTATATGGCAACTGCTTTCCTGAGC...AAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp TTTGACTATCTGCTTAATTTACTTTTGACACTATTTGCACAGGACCTTGGAGTGGTAGATGAGGCGCAGTaGCACGATGCTCTGGCGCTC +
Preference number: 4 (lower is better)
Translates to: FDYLLNLLLTLFAQDLGVVDEAQ*HDALAL
Trigger: GAGCGCCAGAGCATCGTGCCACTGCGCCTCATCTAC...CACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATTAAGCAGATAGTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR CCA 90 bp GGCTCCTGCATCAGCAAACTGTGGAGGCCAGAAGTTTTGCTGGGCATTTTGTTCATTTCGCATAGGTATTaGTATGTACAACGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: GSCISKLWRPEVLLGILFISHRY*YVQRKA
Trigger: GGCTTTCCGTTGTACATACCAATACCTATGCGAAAT...GAACAAAATGCCCAGCAAAACTTCTGGCCTCCACAGTTTGCTGATGCAGGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp GATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGTTATGGGCTAATGACTaGGCAAGTGTAACAGCCATT +
Preference number: 4 (lower is better)
Translates to: DVKLRFLSSVASQRVFVLLWAND*ASVTAI
Trigger: AATGGCTGTTACACTTGCCCAGTCATTAGCCCATAA...CAATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp GAAAGCCCTCACCATGTTGCACTGTCCGATGTATTCCTTTCCACAGATTGCATGATATTAGGGGCACACTaGCTTGAATTTCCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: ESPHHVALSDVFLSTDCMILGAH*LEFPEH
Trigger: GTGCTCAGGAAATTCAAGCCAGTGTGCCCCTAATAT...CATGCAATCTGTGGAAAGGAATACATCGGACAGTGCAACATGGTGAGGGCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp GGCAGTACGTTGTCTCATGTGTCTTTGGTGCACTTGCTTAATCTCAGCAGCACAAGGAAGTGGAGGCATTaGGTAAGGGTATTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: GSTLSHVSLVHLLNLSSTRKWRH*VRVFSA
Trigger: AGCAGAAAATACCCTTACCCAATGCCTCCACTTCCT...TGTGCTGCTGAGATTAAGCAAGTGCACCAAAGACACATGAGACAACGTACTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp GAACAAAACTTCAGGCCACAAAGGGTTAGAGTATTGGCAAACCAGAAGCTACCAGTCCTCATCAGGAAGTaGAGGCATTGGGTAAGGGTA +
Preference number: 4 (lower is better)
Translates to: EQNFRPQRVRVLANQKLPVLIRK*RHWVRV
Trigger: TACCCTTACCCAATGCCTCCACTTCCTGATGAGGAC...TGGTAGCTTCTGGTTTGCCAATACTCTAACCCTTTGTGGCCTGAAGTTTTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp TCAATCTGTCTGCCCTTCTGTTCTTGGCTTGAGCTATGTGGCAACACTGCCCAAAAAGGGTTAGAGTATTaGCAAACCAGAAGCTACCAG +
Preference number: 4 (lower is better)
Translates to: SICLPFCSWLELCGNTAQKGLEY*QTRSYQ
Trigger: CTGGTAGCTTCTGGTTTGCCAATACTCTAACCCTTT...TTGGGCAGTGTTGCCACATAGCTCAAGCCAAGAACAGAAGGGCAGACAGATTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp CCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTTGGAGATGCTGCATCTCTGTaGTTTAGATCTAACTTAACC +
Preference number: 4 (lower is better)
Translates to: PAASLFCIRRCGRKAPLGDAASL*FRSNLT
Trigger: GGTTAAGTTAGATCTAAACCACAGAGATGCAGCATC...TCCAAGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp AATTTACTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTTTTTCCATTAGACTTGCTTGGTCAACATaGGTCAACTGCGGGCCACCG +
Preference number: 4 (lower is better)
Translates to: NLLLTLFAQDLGVPFSIRLAWST*VNCGPP
Trigger: CGGTGGCCCGCAGTTGACTCATGTTGACCAAGCAAG...TCTAATGGAAAAAGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR TCA 90 bp TTTCAAAGCATCAGATTCTTTCCCCCACCAGCTGTTAGTGTAACTTCGCAGATGGCACGACATCGAGAATaGATGACGTTCCAAAGGCAT +
Preference number: 4 (lower is better)
Translates to: FQSIRFFPPPAVSVTSQMARHRE*MTFQRH
Trigger: ATGCCTTTGGAACGTCATTCATTCTCGATGTCGTGC...CATCTGCGAAGTTACACTAACAGCTGGTGGGGGAAAGAATCTGATGCTTTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp AAGTCCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTTATCCATCCATTTTATaGATATTAGGGGCACACTGG +
Preference number: 4 (lower is better)
Translates to: KSCCIFVLHPQMWEKSSSYPSIL*ILGAHW
Trigger: CCAGTGTGCCCCTAATATTCATAAAATGGATGGATA...AGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp ACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTCTGAACACCATCACATaGATATCCATCCATTTTATG +
Preference number: 4 (lower is better)
Translates to: TRCETPLPLLCSISEGLRLNTIT*ISIHFM
Trigger: CATAAAATGGATGGATATTCATGTGATGGTGTTCAG...ACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp GGCAGTACGTTGTCTCATGTGTCTTTGGTGCACTTGCTTAATCTCAGCAGCACAATAGCAATATTTGTCTaGTGCTGTCACCTTTTGCCC +
Preference number: 4 (lower is better)
Translates to: GSTLSHVSLVHLLNLSSTIAIFV*CCHLLP
Trigger: GGGCAAAAGGTGACAGCATCAGACAAATATTGCTAT...TGTGCTGCTGAGATTAAGCAAGTGCACCAAAGACACATGAGACAACGTACTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp CTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGTCTGAAGAGCAGATAGATCATTGCCAGACAGAGTaGTACCAGTCTTTGCATCAT +
Preference number: 4 (lower is better)
Translates to: LSSVASQRVFVLSEEQIDHCQTE*YQSLHH
Trigger: ATGATGCAAAGACTGGTATCACTCTGTCTGGCAATG...ATCTATCTGCTCTTCAGACAATACGAAGACCCTCTGAGATGCTACAGAGGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398204.8
ENST00000398209.7
ENST00000426930.5
CDS-3UTR TCA 90 bp GATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGCAATTATGCCTATTATaGTATTGGTGCCAGCAACAC +
Preference number: 4 (lower is better)
Translates to: DVKLRFLSSVASQRVFVLQLCLL*YWCQQH
Trigger: GTGTTGCTGGCACCAATATCATAATAGGCATAATTG...CAATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398204.8
ENST00000398209.7
ENST00000426930.5
CDS-3UTR TCA 90 bp AACTTCAGGCCACAAAGGGTTAGAGTATTGGCAAACCAGAAGCTACCAGCTCACCAGTTATTCCTAATATaGGGGCCAGCACTAAAATGG +
Preference number: 4 (lower is better)
Translates to: NFRPQRVRVLANQKLPAHQLFLI*GPALKW
Trigger: CCATTTTAGTGCTGGCCCTCATATTAGGAATAACTG...GTGAGCTGGTAGCTTCTGGTTTGCCAATACTCTAACCCTTTGTGGCCTGAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp AGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTCAGTTATTCCTAATATaGGGGCCAGCACTAAAATGG +
Preference number: 4 (lower is better)
Translates to: RCETPLPLLCSISEGLRIQLFLI*GPALKW
Trigger: CCATTTTAGTGCTGGCCCTCATATTAGGAATAACTG...AATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398204.8
ENST00000398209.7
ENST00000426930.5
CDS-3UTR TCA 90 bp CTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGTCTGAAGAGCAGATAGATCAGATAGATTTGCAGTaGTTCCATGAGCCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: LSSVASQRVFVLSEEQIDQIDLQ*FHEPGF
Trigger: AAACCCAGGCTCATGGAATCACTGCAAATCTATCTG...ATCTATCTGCTCTTCAGACAATACGAAGACCCTCTGAGATGCTACAGAGGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398204.8
ENST00000398209.7
ENST00000426930.5
CDS-3UTR TCA 90 bp AGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTCCCTTTATGAATGGTTaGAGCTGCTCAACTCAAACA +
Preference number: 4 (lower is better)
Translates to: RCETPLPLLCSISEGLRIPFMNG*SCSTQT
Trigger: TGTTTGAGTTGAGCAGCTTCAACCATTCATAAAGGG...AATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp GGCTCCTGCATCAGCAAACTGTGGAGGCCAGAAGTTTTGCTGGGCATTTTGTTCAGAACACACAGCAAATaGGGAAATCAGAAGTATACT +
Preference number: 4 (lower is better)
Translates to: GSCISKLWRPEVLLGILFRTHSK*GNQKYT
Trigger: AGTATACTTCTGATTTCCTCATTTGCTGTGTGTTCT...GAACAAAATGCCCAGCAAAACTTCTGGCCTCCACAGTTTGCTGATGCAGGAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp TCAATCTGTCTGCCCTTCTGTTCTTGGCTTGAGCTATGTGGCAACACTGCCCAAACTGTGCCAGAAATTTaGACCTTAAGTTACAGTGAC +
Preference number: 4 (lower is better)
Translates to: SICLPFCSWLELCGNTAQTVPEI*TLSYSD
Trigger: GTCACTGTAACTTAAGGTTCAAATTTCTGGCACAGT...TTGGGCAGTGTTGCCACATAGCTCAAGCCAAGAACAGAAGGGCAGACAGATTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp AACTTCAGGCCACAAAGGGTTAGAGTATTGGCAAACCAGAAGCTACCAGCTCACGATGCTGTCACCTTTTaGCCCCAAATGTATTTGCAT +
Preference number: 4 (lower is better)
Translates to: NFRPQRVRVLANQKLPAHDAVTF*PQMYLH
Trigger: ATGCAAATACATTTGGGGGCAAAAGGTGACAGCATC...GTGAGCTGGTAGCTTCTGGTTTGCCAATACTCTAACCCTTTGTGGCCTGAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp AGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGATGCTGTCACCTTTTaGCCCCAAATGTATTTGCAT +
Preference number: 4 (lower is better)
Translates to: RCETPLPLLCSISEGLRIDAVTF*PQMYLH
Trigger: ATGCAAATACATTTGGGGGCAAAAGGTGACAGCATC...AATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp GGCTCCTGCATCAGCAAACTGTGGAGGCCAGAAGTTTTGCTGGGCATTTTGTTCCAAGCCTTGGGATATTaGCAATATTGGTACACAAAA +
Preference number: 4 (lower is better)
Translates to: GSCISKLWRPEVLLGILFQALGY*QYWYTK
Trigger: TTTTGTGTACCAATATTGGCAATATCCCAAGGCTTG...GAACAAAATGCCCAGCAAAACTTCTGGCCTCCACAGTTTGCTGATGCAGGAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp AAGTCCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTTCTTCAAGCTTAACATaGCCACCACTGCAGTTTAAT +
Preference number: 4 (lower is better)
Translates to: KSCCIFVLHPQMWEKSSSSSSLT*PPLQFN
Trigger: ATTAAACTGCAGTGGTGGGCATGTTAAGCTTGAAGA...AGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp AGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTACTTCAGCTCATTACTaGAAACTCCATTTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: RCETPLPLLCSISEGLRITSAHY*KLHFLS
Trigger: GCTCAGGAAATGGAGTTTGCAGTAATGAGCTGAAGT...AATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398204.8
ENST00000398209.7
ENST00000426930.5
CDS-3UTR GCA 90 bp AGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGAGGGAAGTAAGTGTTaGAATCAGAACCTATCCAGT +
Preference number: 4 (lower is better)
Translates to: RCETPLPLLCSISEGLRIEGSKC*NQNLSS
Trigger: ACTGGATAGGTTCTGATTGCAACACTTACTTCCCTC...AATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398204.8
ENST00000398209.7
ENST00000426930.5
CDS-3UTR GCA 90 bp GATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGCCAGCACTAAAATGGTaGCAGCAATTATGCCTATTA +
Preference number: 4 (lower is better)
Translates to: DVKLRFLSSVASQRVFVLPALKW*QQLCLL
Trigger: TAATAGGCATAATTGCTGGCACCATTTTAGTGCTGG...CAATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398204.8
ENST00000398209.7
ENST00000426930.5
CDS-3UTR GCA 90 bp GGCAGTACGTTGTCTCATGTGTCTTTGGTGCACTTGCTTAATCTCAGCAGCACATTTACAGTGAGGATGTaGCTCAGAACGTCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: GSTLSHVSLVHLLNLSSTFTVRM*LRTSSS
Trigger: AGAACTTGACGTTCTGAGGCACATCCTCACTGTAAA...TGTGCTGCTGAGATTAAGCAAGTGCACCAAAGACACATGAGACAACGTACTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp GAAAGCCCTCACCATGTTGCACTGTCCGATGTATTCCTTTCCACAGATTGCATGAATCTTCCGTCATCTTaGTTCAGAGTCAGTGCAGAA +
Preference number: 4 (lower is better)
Translates to: ESPHHVALSDVFLSTDCMNLPSS*FRVSAE
Trigger: TTCTGCACTGACTCTGAAGCAAGATGACGGAAGATT...CATGCAATCTGTGGAAAGGAATACATCGGACAGTGCAACATGGTGAGGGCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp GAACAAAACTTCAGGCCACAAAGGGTTAGAGTATTGGCAAACCAGAAGCTACCAAAGCCCTCACCATGTTaGACTGTCCGATGTATTCCT +
Preference number: 4 (lower is better)
Translates to: EQNFRPQRVRVLANQKLPKPSPC*TVRCIP
Trigger: AGGAATACATCGGACAGTGCAACATGGTGAGGGCTT...TGGTAGCTTCTGGTTTGCCAATACTCTAACCCTTTGTGGCCTGAAGTTTTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp TTTCAAAGCATCAGATTCTTTCCCCCACCAGCTGTTAGTGTAACTTCGCAGATGATATTTACAACACGCTaGCCATGTGGGCATCCAGTG +
Preference number: 4 (lower is better)
Translates to: FQSIRFFPPPAVSVTSQMIFTTR*PCGHPV
Trigger: CACTGGATGCCCACATGGGCAGCGTGTTGTAAATAT...CATCTGCGAAGTTACACTAACAGCTGGTGGGGGAAAGAATCTGATGCTTTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp TCTGAGACAGACACAAAATCACTTCTCTGGTATTTCTGCCAAAAATACATATCTGTAGATGAGGCGCAGTaGCACGATGCTCTGGCGCTC +
Preference number: 4 (lower is better)
Translates to: SETDTKSLLWYFCQKYISVDEAQ*HDALAL
Trigger: GAGCGCCAGAGCATCGTGCCACTGCGCCTCATCTAC...AGATATGTATTTTTGGCAGAAATACCAGAGAAGTGATTTTGTGTCTGTCTCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439864.5
CDS-3UTR CCA 90 bp TTTCAAAGCATCAGATTCTTTCCCCCACCAGCTGTTAGTGTAACTTCGCAGATGCCAAAGGCATCAACCTaGAAGCTTGCTTGGTCAACA +
Preference number: 4 (lower is better)
Translates to: FQSIRFFPPPAVSVTSQMPKAST*KLAWST
Trigger: TGTTGACCAAGCAAGCTTCCAGGTTGATGCCTTTGG...CATCTGCGAAGTTACACTAACAGCTGGTGGGGGAAAGAATCTGATGCTTTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp AAGTCCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTATTTCGCATAGGTATTaGTATGTACAACGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: KSCCIFVLHPQMWEKSSSISHRY*YVQRKA
Trigger: GGCTTTCCGTTGTACATACCAATACCTATGCGAAAT...AGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp AGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTACAGTTGATCTTAAATaGATGTCTCCCATAGCCTGG +
Preference number: 4 (lower is better)
Translates to: RCETPLPLLCSISEGLRITVDLK*MSPIAW
Trigger: CCAGGCTATGGGAGACATCCATTTAAGATCAACTGT...AATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398204.8
ENST00000398209.7
ENST00000426930.5
CDS-3UTR CCA 90 bp GGCTCCTGCATCAGCAAACTGTGGAGGCCAGAAGTTTTGCTGGGCATTTTGTTCTTAACCCTTTATGAATaGTTGAAGCTGCTCAACTCA +
Preference number: 4 (lower is better)
Translates to: GSCISKLWRPEVLLGILFLTLYE*LKLLNS
Trigger: TGAGTTGAGCAGCTTCAACCATTCATAAAGGGTTAA...GAACAAAATGCCCAGCAAAACTTCTGGCCTCCACAGTTTGCTGATGCAGGAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp GAACAAAACTTCAGGCCACAAAGGGTTAGAGTATTGGCAAACCAGAAGCTACCACACTCACCCAAACCTTaGCCTGATGGATCGCTTTAT +
Preference number: 4 (lower is better)
Translates to: EQNFRPQRVRVLANQKLPHSPKP*PDGSLY
Trigger: ATAAAGCGATCCATCAGGCCAAGGTTTGGGTGAGTG...TGGTAGCTTCTGGTTTGCCAATACTCTAACCCTTTGTGGCCTGAAGTTTTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp ATAGCATTAGCCTTTTGTACACTCAGTACCAGGAAACATTCAGTGCACGTTACAAGATTGCATGTGCCCTaGGGATCATTTCCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: IALAFCTLSTRKHSVHVTRLHVP*GSFPAC
Trigger: GCAGGCTGGAAATGATCCCCAGGGCACATGCAATCT...TGTAACGTGCACTGAATGTTTCCTGGTACTGAGTGTACAAAAGGCTAATGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp GGCTCCTGCATCAGCAAACTGTGGAGGCCAGAAGTTTTGCTGGGCATTTTGTTCGGATACGTAGGAACATaGAATGATGATTACTTGATG +
Preference number: 4 (lower is better)
Translates to: GSCISKLWRPEVLLGILFGYVGT*NDDYLM
Trigger: CATCAAGTAATCATCATTCCATGTTCCTACGTATCC...GAACAAAATGCCCAGCAAAACTTCTGGCCTCCACAGTTTGCTGATGCAGGAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp CTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGTCTGAAGAGCAGATAGATATTAACACCTCCTCATaGGGTGGCTTCCACTATCTA +
Preference number: 4 (lower is better)
Translates to: LSSVASQRVFVLSEEQIDINTSS*GGFHYL
Trigger: TAGATAGTGGAAGCCACCCCATGAGGAGGTGTTAAT...ATCTATCTGCTCTTCAGACAATACGAAGACCCTCTGAGATGCTACAGAGGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR CAA 72 bp TACAGCAACCACAGCAAATTGAAAGCCCTCACCATGTaGCACTGTCCGATGTATTCCTTTCCACAGATTGCA +
Preference number: 4 (lower is better)
Translates to: YSNHSKLKALTM*HCPMYSFPQIA
Trigger: TGCAATCTGTGGAAAGGAATACATCGGACAGTGCAACATGGTGAGGGCTTTCAATTTGCTGTGGTTGCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp GACTATCTGCTTAATTTACTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTCCTCTCCAGTTTCAATaGAGCCATTGCCACACTCAG +
Preference number: 4 (lower is better)
Translates to: DYLLNLLLTLFAQDLGVPPLQFQ*SHCHTQ
Trigger: CTGAGTGTGGCAATGGCTTCATTGAAACTGGAGAGG...AGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATTAAGCAGATAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR TCA 90 bp CTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGTCTGAAGAGCAGATAGATATAGCAATATTTGTCTaGTGCTGTCACCTTTTGCCC +
Preference number: 4 (lower is better)
Translates to: LSSVASQRVFVLSEEQIDIAIFV*CCHLLP
Trigger: GGGCAAAAGGTGACAGCATCAGACAAATATTGCTAT...ATCTATCTGCTCTTCAGACAATACGAAGACCCTCTGAGATGCTACAGAGGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp GAAAGCCCTCACCATGTTGCACTGTCCGATGTATTCCTTTCCACAGATTGCATGCAATTATGCCTATTATaGTATTGGTGCCAGCAACAC +
Preference number: 4 (lower is better)
Translates to: ESPHHVALSDVFLSTDCMQLCLL*YWCQQH
Trigger: GTGTTGCTGGCACCAATATCATAATAGGCATAATTG...CATGCAATCTGTGGAAAGGAATACATCGGACAGTGCAACATGGTGAGGGCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp CTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGTCTGAAGAGCAGATAGATGGTCTTCGTATTGTCTaGAGAGCAGATAGATTTGCA +
Preference number: 4 (lower is better)
Translates to: LSSVASQRVFVLSEEQIDGLRIV*RADRFA
Trigger: TGCAAATCTATCTGCTCTTCAGACAATACGAAGACC...ATCTATCTGCTCTTCAGACAATACGAAGACCCTCTGAGATGCTACAGAGGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398204.8
ENST00000398209.7
ENST00000426930.5
CDS-3UTR TCA 90 bp GAAAGCCCTCACCATGTTGCACTGTCCGATGTATTCCTTTCCACAGATTGCATGCAGAACGTCAAGTTCTaGATCCACTATTGTACCTTA +
Preference number: 4 (lower is better)
Translates to: ESPHHVALSDVFLSTDCMQNVKF*IHYCTL
Trigger: TAAGGTACAATAGTGGATTCAGAACTTGACGTTCTG...CATGCAATCTGTGGAAAGGAATACATCGGACAGTGCAACATGGTGAGGGCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp GAACAAAACTTCAGGCCACAAAGGGTTAGAGTATTGGCAAACCAGAAGCTACCACATTACTGTTTACAGTaGGGATGTGCCTCAGAACGT +
Preference number: 4 (lower is better)
Translates to: EQNFRPQRVRVLANQKLPHYCLQ*GCASER
Trigger: ACGTTCTGAGGCACATCCTCACTGTAAACAGTAATG...TGGTAGCTTCTGGTTTGCCAATACTCTAACCCTTTGTGGCCTGAAGTTTTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp GATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGCATCCCTTCCTGTCATaGAAAATGCTGTTTTACATT +
Preference number: 4 (lower is better)
Translates to: DVKLRFLSSVASQRVFVLHPFLS*KMLFYI
Trigger: AATGTAAAACAGCATTTTTCATGACAGGAAGGGATG...CAATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp ATAGCATTAGCCTTTTGTACACTCAGTACCAGGAAACATTCAGTGCACGTTACAACCCAAACCTTGGCCTaGTGGATCGCTTTATGGTCA +
Preference number: 4 (lower is better)
Translates to: IALAFCTLSTRKHSVHVTTQTLA*WIALWS
Trigger: TGACCATAAAGCGATCCATCAGGCCAAGGTTTGGGT...TGTAACGTGCACTGAATGTTTCCTGGTACTGAGTGTACAAAAGGCTAATGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp GTAACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCATATAGATACTTCTTaGAACTCTCCCTTGAGACTA +
Preference number: 4 (lower is better)
Translates to: VTRCETPLPLLCSISEGLHIDTS*NSPLRL
Trigger: TAGTCTCAAGGGAGAGTTTCAAGAAGTATCTATATG...AAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp AGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTCATATTGCCTGGTTTTaGTTTCAAGGATACGTAGGA +
Preference number: 4 (lower is better)
Translates to: RCETPLPLLCSISEGLRIHIAWF*FQGYVG
Trigger: TCCTACGTATCCTTGAAATCAAAACCAGGCAATATG...AATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp TTGACACTATTTGCACAGGACCTTGGAGTGCCTTTTTCCATTAGAGGTTCAGACAGCAAAGACCGTCACTaGATTGAGAGTCTTGAGTCA +
Preference number: 4 (lower is better)
Translates to: LTLFAQDLGVPFSIRGSDSKDRH*IESLES
Trigger: TGACTCAAGACTCTCAATGCAGTGACGGTCTTTGCT...GTCTGAACCTCTAATGGAAAAAGGCACTCCAAGGTCCTGTGCAAATAGTGTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR GCA 90 bp AAGTCCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTAATGTTCTTCCTTGCTaGACAACTAAAGTAGATGTG +
Preference number: 4 (lower is better)
Translates to: KSCCIFVLHPQMWEKSSSNVLPC*TTKVDV
Trigger: CACATCTACTTTAGTTGTGCAGCAAGGAAGAACATT...AGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp AGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTAGTGATACCAGTCTTTaGATCATCATTGTGAGGGAA +
Preference number: 4 (lower is better)
Translates to: RCETPLPLLCSISEGLRISDTSL*IIIVRE
Trigger: TTCCCTCACAATGATGATGCAAAGACTGGTATCACT...AATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398204.8
ENST00000398209.7
ENST00000426930.5
CDS-3UTR GCA 90 bp TTACTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTTTTTCCATTAGAGGTCCTCCCAGGTTACCTTaGCAAGAGTTACTTCGAGGT +
Preference number: 4 (lower is better)
Translates to: LLLTLFAQDLGVPFSIRGPPRLP*QELLRG
Trigger: ACCTCGAAGTAACTCTTGGCAAGGTAACCTGGGAGG...ACCTCTAATGGAAAAAGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR GCA 90 bp ATAGCATTAGCCTTTTGTACACTCAGTACCAGGAAACATTCAGTGCACGTTACACCTCCCAGGTTACCTTaGCAAGAGTTACTTCGAGGT +
Preference number: 4 (lower is better)
Translates to: IALAFCTLSTRKHSVHVTPPRLP*QELLRG
Trigger: ACCTCGAAGTAACTCTTGGCAAGGTAACCTGGGAGG...TGTAACGTGCACTGAATGTTTCCTGGTACTGAGTGTACAAAAGGCTAATGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp TTGACACTATTTGCACAGGACCTTGGAGTGCCTTTTTCCATTAGAGGTTCAGACCACAGGACCTTGGAGTaGCTTTTTCCATTAGAGGTT +
Preference number: 4 (lower is better)
Translates to: LTLFAQDLGVPFSIRGSDHRTLE*LFPLEV
Trigger: AACCTCTAATGGAAAAAGGCACTCCAAGGTCCTGTG...GTCTGAACCTCTAATGGAAAAAGGCACTCCAAGGTCCTGTGCAAATAGTGTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR GCA 90 bp TTGACACTATTTGCACAGGACCTTGGAGTGCCTTTTTCCATTAGAGGTTCAGACACTTTTGACACTATTTaGACAGGACCTTGGAGTGCC +
Preference number: 4 (lower is better)
Translates to: LTLFAQDLGVPFSIRGSDTFDTI*TGPWSA
Trigger: GGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGT...GTCTGAACCTCTAATGGAAAAAGGCACTCCAAGGTCCTGTGCAAATAGTGTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR GCA 90 bp TTTCAAAGCATCAGATTCTTTCCCCCACCAGCTGTTAGTGTAACTTCGCAGATGCACAGTATAAAATGCTaGCTTCTAACTCGGCCCTTC +
Preference number: 4 (lower is better)
Translates to: FQSIRFFPPPAVSVTSQMHSIKC*LLTRPF
Trigger: GAAGGGCCGAGTTAGAAGGCAGCATTTTATACTGTG...CATCTGCGAAGTTACACTAACAGCTGGTGGGGGAAAGAATCTGATGCTTTGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp CTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGTCTGAAGAGCAGATAGATATCTTTCAATCTGTCTaGCCTTCTGTTCTTGGCTTG +
Preference number: 4 (lower is better)
Translates to: LSSVASQRVFVLSEEQIDIFQSV*PSVLGL
Trigger: CAAGCCAAGAACAGAAGGGCAGACAGATTGAAAGAT...ATCTATCTGCTCTTCAGACAATACGAAGACCCTCTGAGATGCTACAGAGGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp GGCTCCTGCATCAGCAAACTGTGGAGGCCAGAAGTTTTGCTGGGCATTTTGTTCCTTTCAGAAATTCTATaGCAGACTGACCTTATATAC +
Preference number: 4 (lower is better)
Translates to: GSCISKLWRPEVLLGILFLSEIL*QTDLIY
Trigger: GTATATAAGGTCAGTCTGGCATAGAATTTCTGAAAG...GAACAAAATGCCCAGCAAAACTTCTGGCCTCCACAGTTTGCTGATGCAGGAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp AGGTTATTCCTAATCGAAGCTCCGGGTGTCTTGTTAAAAATACAGCAACCACAGGAAGATAAAGATGCCTaGCACCTCTACTCCCTAGAG +
Preference number: 4 (lower is better)
Translates to: RLFLIEAPGVLLKIQQPQEDKDA*HLYSLE
Trigger: CTCTAGGGAGTAGAGGTGGCAGGCATCTTTATCTTC...CTGTGGTTGCTGTATTTTTAACAAGACACCCGGAGCTTCGATTAGGAATAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp GAACAAAACTTCAGGCCACAAAGGGTTAGAGTATTGGCAAACCAGAAGCTACCATCTCCCAAAGTTCTCTaGTTCTTATCTCCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: EQNFRPQRVRVLANQKLPSPKVL*FLSPPH
Trigger: ATGGGGAGGAGATAAGAAGCAGAGAACTTTGGGAGA...TGGTAGCTTCTGGTTTGCCAATACTCTAACCCTTTGTGGCCTGAAGTTTTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp AGGTTATTCCTAATCGAAGCTCCGGGTGTCTTGTTAAAAATACAGCAACCACAGTATGCCAGGACTAAATaGCCCATGGTCTCCCAAAGT +
Preference number: 4 (lower is better)
Translates to: RLFLIEAPGVLLKIQQPQYARTK*PMVSQS
Trigger: ACTTTGGGAGACCATGGGGCATTTAGTCCTGGCATA...CTGTGGTTGCTGTATTTTTAACAAGACACCCGGAGCTTCGATTAGGAATAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp CATGCCAGGAGAAAAGTTGCTGCATCCAAAACCAGAGTAGTCTTATCCATTCAACAATGTGTGCTCTCCTaGATATCTGGCCTCAGGAAT +
Preference number: 4 (lower is better)
Translates to: HARRKVAASKTRVVLSIQQCVLS*ISGLRN
Trigger: ATTCCTGAGGCCAGATATGCAGGAGAGCACACATTG...TTGAATGGATAAGACTACTCTGGTTTTGGATGCAGCAACTTTTCTCCTGGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp CATGCCAGGAGAAAAGTTGCTGCATCCAAAACCAGAGTAGTCTTATCCATTCAACCAAAGGCATCAACCTaGAAGCTTGCTTGGTCAACA +
Preference number: 4 (lower is better)
Translates to: HARRKVAASKTRVVLSIQPKAST*KLAWST
Trigger: TGTTGACCAAGCAAGCTTCCAGGTTGATGCCTTTGG...TTGAATGGATAAGACTACTCTGGTTTTGGATGCAGCAACTTTTCTCCTGGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp GTAACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTATGGATTTTCAGATATaGCAAACTTGTTGTCAGTCG +
Preference number: 4 (lower is better)
Translates to: VTRCETPLPLLCSISEGLMDFQI*QTCCQS
Trigger: CGACTGACAACAAGTTTGCCATATCTGAAAATCCAT...AAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp CATGCCAGGAGAAAAGTTGCTGCATCCAAAACCAGAGTAGTCTTATCCATTCAATCTAAGCACATCATTTaGGGACCACAAGGTGTCCCA +
Preference number: 4 (lower is better)
Translates to: HARRKVAASKTRVVLSIQSKHII*GPQGVP
Trigger: TGGGACACCTTGTGGTCCCCAAATGATGTGCTTAGA...TTGAATGGATAAGACTACTCTGGTTTTGGATGCAGCAACTTTTCTCCTGGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp CTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGTCTGAAGAGCAGATAGATGTCTTTGAAGATCACTaGATGGATGACGATGATGTG +
Preference number: 4 (lower is better)
Translates to: LSSVASQRVFVLSEEQIDVFEDH*MDDDDV
Trigger: CACATCATCGTCATCCATCCAGTGATCTTCAAAGAC...ATCTATCTGCTCTTCAGACAATACGAAGACCCTCTGAGATGCTACAGAGGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp ACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTGACAAATACGAATTATaGAGAGACACATTTACAGCA +
Preference number: 4 (lower is better)
Translates to: TRCETPLPLLCSISEGLRDKYEL*RDTFTA
Trigger: TGCTGTAAATGTGTCTCTCCATAATTCGTATTTGTC...ACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp CATGCCAGGAGAAAAGTTGCTGCATCCAAAACCAGAGTAGTCTTATCCATTCAAAAGCTACCAGCTCACTaGCAGTACGTTGTCTCATGT +
Preference number: 4 (lower is better)
Translates to: HARRKVAASKTRVVLSIQKLPAH*QYVVSC
Trigger: ACATGAGACAACGTACTGCCAGTGAGCTGGTAGCTT...TTGAATGGATAAGACTACTCTGGTTTTGGATGCAGCAACTTTTCTCCTGGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp TTTCAAAGCATCAGATTCTTTCCCCCACCAGCTGTTAGTGTAACTTCGCAGATGATTAACACCTCCTCATaGGGTGGCTTCCACTATCTA +
Preference number: 4 (lower is better)
Translates to: FQSIRFFPPPAVSVTSQMINTSS*GGFHYL
Trigger: TAGATAGTGGAAGCCACCCCATGAGGAGGTGTTAAT...CATCTGCGAAGTTACACTAACAGCTGGTGGGGGAAAGAATCTGATGCTTTGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR CAA 72 bp AGCTGCTCAACTCAAACAGTAGAATCTTCCGTCATCTaGCTTCAGAGTCAGTGCAGAATGACTTGTTGGGAT +
Preference number: 4 (lower is better)
Translates to: SCSTQTVESSVI*LQSQCRMTCWD
Trigger: ATCCCAACAAGTCATTCTGCACTGACTCTGAAGCAAGATGACGGAAGATTCTACTGTTTGAGTTGAGCAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp CATGCCAGGAGAAAAGTTGCTGCATCCAAAACCAGAGTAGTCTTATCCATTCAATTTCTTCTGGCTCAATaGGATATGTGTGGTTCCCGT +
Preference number: 4 (lower is better)
Translates to: HARRKVAASKTRVVLSIQFLLAQ*DMCGSR
Trigger: ACGGGAACCACACATATCTCATTGAGCCAGAAGAAA...TTGAATGGATAAGACTACTCTGGTTTTGGATGCAGCAACTTTTCTCCTGGCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp CTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGTCTGAAGAGCAGATAGATTATCCATCCATTTTATaGATATTAGGGGCACACTGG +
Preference number: 4 (lower is better)
Translates to: LSSVASQRVFVLSEEQIDYPSIL*ILGAHW
Trigger: CCAGTGTGCCCCTAATATTCATAAAATGGATGGATA...ATCTATCTGCTCTTCAGACAATACGAAGACCCTCTGAGATGCTACAGAGGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp AACTTCAGGCCACAAAGGGTTAGAGTATTGGCAAACCAGAAGCTACCAGCTCACCTGAACACCATCACATaGATATCCATCCATTTTATG +
Preference number: 4 (lower is better)
Translates to: NFRPQRVRVLANQKLPAHLNTIT*ISIHFM
Trigger: CATAAAATGGATGGATATTCATGTGATGGTGTTCAG...GTGAGCTGGTAGCTTCTGGTTTGCCAATACTCTAACCCTTTGTGGCCTGAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp TTTCAAAGCATCAGATTCTTTCCCCCACCAGCTGTTAGTGTAACTTCGCAGATGGCAAACTCCATTTCCTaGGCAAATAGTGCCTTCTTT +
Preference number: 4 (lower is better)
Translates to: FQSIRFFPPPAVSVTSQMANSIS*ANSAFF
Trigger: AAAGAAGGCACTATTTGCTCAGGAAATGGAGTTTGC...CATCTGCGAAGTTACACTAACAGCTGGTGGGGGAAAGAATCTGATGCTTTGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp AGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTTTAAGAGAGTATATCTaGAAACCTGTCTGCAGATTC +
Preference number: 4 (lower is better)
Translates to: RCETPLPLLCSISEGLRILREYI*KPVCRF
Trigger: GAATCTGCAGACAGGTTTTCAGATATACTCTCTTAA...AATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp AAAAGTCACTTTATTTGCTACATCTTTCAATCTGTCTGCCCTTCTGTTCTTGGCACCCAAACCTTGGCCTaGTGGATCGCTTTATGGTCA +
Preference number: 4 (lower is better)
Translates to: KSHFICYIFQSVCPSVLGTQTLA*WIALWS
Trigger: TGACCATAAAGCGATCCATCAGGCCAAGGTTTGGGT...GCCAAGAACAGAAGGGCAGACAGATTGAAAGATGTAGCAAATAAAGTGACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp AACTTCAGGCCACAAAGGGTTAGAGTATTGGCAAACCAGAAGCTACCAGCTCACCATATAGATACTTCTTaGAACTCTCCCTTGAGACTA +
Preference number: 4 (lower is better)
Translates to: NFRPQRVRVLANQKLPAHHIDTS*NSPLRL
Trigger: TAGTCTCAAGGGAGAGTTTCAAGAAGTATCTATATG...GTGAGCTGGTAGCTTCTGGTTTGCCAATACTCTAACCCTTTGTGGCCTGAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp GAAAGCCCTCACCATGTTGCACTGTCCGATGTATTCCTTTCCACAGATTGCATGTTTACTGCACTGCAATaGCTATGGATAAATGGAACT +
Preference number: 4 (lower is better)
Translates to: ESPHHVALSDVFLSTDCMFTALQ*LWINGT
Trigger: AGTTCCATTTATCCATAGTCATTGCAGTGCAGTAAA...CATGCAATCTGTGGAAAGGAATACATCGGACAGTGCAACATGGTGAGGGCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp CATGCCAGGAGAAAAGTTGCTGCATCCAAAACCAGAGTAGTCTTATCCATTCAAATCACAATCATTTACTaGTTCTCGGCACACAGTGCC +
Preference number: 4 (lower is better)
Translates to: HARRKVAASKTRVVLSIQITIIY*FSAHSA
Trigger: GGCACTGTGTGCCGAGAAGCAGTAAATGATTGTGAT...TTGAATGGATAAGACTACTCTGGTTTTGGATGCAGCAACTTTTCTCCTGGCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp CTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGTCTGAAGAGCAGATAGATGTCTATCTCTGGTTTTaGATCTTCCTCCAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: LSSVASQRVFVLSEEQIDVYLWF*IFLQSK
Trigger: TTTGCTTTGGAGGAAGATGCAAAACCAGAGATAGAC...ATCTATCTGCTCTTCAGACAATACGAAGACCCTCTGAGATGCTACAGAGGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp TTGACACTATTTGCACAGGACCTTGGAGTGCCTTTTTCCATTAGAGGTTCAGACGATGCTGTCACCTTTTaGCCCCAAATGTATTTGCAT +
Preference number: 4 (lower is better)
Translates to: LTLFAQDLGVPFSIRGSDDAVTF*PQMYLH
Trigger: ATGCAAATACATTTGGGGGCAAAAGGTGACAGCATC...GTCTGAACCTCTAATGGAAAAAGGCACTCCAAGGTCCTGTGCAAATAGTGTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR GCA 90 bp CTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGTCTGAAGAGCAGATAGATTCTTCAAGCTTAACATaGCCACCACTGCAGTTTAAT +
Preference number: 4 (lower is better)
Translates to: LSSVASQRVFVLSEEQIDSSSLT*PPLQFN
Trigger: ATTAAACTGCAGTGGTGGGCATGTTAAGCTTGAAGA...ATCTATCTGCTCTTCAGACAATACGAAGACCCTCTGAGATGCTACAGAGGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp GAACAAAACTTCAGGCCACAAAGGGTTAGAGTATTGGCAAACCAGAAGCTACCAAATCTTCCGTCATCTTaGTTCAGAGTCAGTGCAGAA +
Preference number: 4 (lower is better)
Translates to: EQNFRPQRVRVLANQKLPNLPSS*FRVSAE
Trigger: TTCTGCACTGACTCTGAAGCAAGATGACGGAAGATT...TGGTAGCTTCTGGTTTGCCAATACTCTAACCCTTTGTGGCCTGAAGTTTTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp ATAGCATTAGCCTTTTGTACACTCAGTACCAGGAAACATTCAGTGCACGTTACATCTCAGGCAGCAGGGTaGCAATCTGTAGTCTTATCA +
Preference number: 4 (lower is better)
Translates to: IALAFCTLSTRKHSVHVTSQAAG*QSVVLS
Trigger: TGATAAGACTACAGATTGGCACCCTGCTGCCTGAGA...TGTAACGTGCACTGAATGTTTCCTGGTACTGAGTGTACAAAAGGCTAATGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp TTGTGTTACTTGTTCAACTTAGCACCGCTATATTTAAAGATTGGGGCTATTTGCGGATCATTTCCAGCCTaGAGCGTTCAGAGGACCATG +
Preference number: 4 (lower is better)
Translates to: LCYLFNLAPLYLKIGAICGSFPA*SVQRTM
Trigger: CATGGTCCTCTGAACGCTGCAGGCTGGAAATGATCC...GCAAATAGCCCCAATCTTTAAATATAGCGGTGCTAAGTTGAACAAGTAACACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp TCAATCTGTCTGCCCTTCTGTTCTTGGCTTGAGCTATGTGGCAACACTGCCCAACTTTCAGAAATTCTATaGCAGACTGACCTTATATAC +
Preference number: 4 (lower is better)
Translates to: SICLPFCSWLELCGNTAQLSEIL*QTDLIY
Trigger: GTATATAAGGTCAGTCTGGCATAGAATTTCTGAAAG...TTGGGCAGTGTTGCCACATAGCTCAAGCCAAGAACAGAAGGGCAGACAGATTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp CATGCCAGGAGAAAAGTTGCTGCATCCAAAACCAGAGTAGTCTTATCCATTCAATCCTTAGTTCTTCCATaGCAGGAGAAAAGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: HARRKVAASKTRVVLSIQSLVLP*QEKSCC
Trigger: GCAGCAACTTTTCTCCTGGCATGGAAGAACTAAGGA...TTGAATGGATAAGACTACTCTGGTTTTGGATGCAGCAACTTTTCTCCTGGCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp AGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTTGTTTTCTAAAGTCCTaGTGCATCTTTGTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: RCETPLPLLCSISEGLRICFLKS*CIFVLH
Trigger: ATGCAGAACAAAGATGCAGCAGGACTTTAGAAAACA...AATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp AGGTTATTCCTAATCGAAGCTCCGGGTGTCTTGTTAAAAATACAGCAACCACAGAACACTCAGTCAATCTaGCAAGCACAGAAGTCTGTC +
Preference number: 4 (lower is better)
Translates to: RLFLIEAPGVLLKIQQPQNTQSI*QAQKSV
Trigger: GACAGACTTCTGTGCTTGGCAGATTGACTGAGTGTT...CTGTGGTTGCTGTATTTTTAACAAGACACCCGGAGCTTCGATTAGGAATAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp ATAGCATTAGCCTTTTGTACACTCAGTACCAGGAAACATTCAGTGCACGTTACACTAGTGCCGACCTACTaGTGGCTAACATGTAAGCTA +
Preference number: 4 (lower is better)
Translates to: IALAFCTLSTRKHSVHVTLVPTY*WLTCKL
Trigger: TAGCTTACATGTTAGCCAGCAGTAGGTCGGCACTAG...TGTAACGTGCACTGAATGTTTCCTGGTACTGAGTGTACAAAAGGCTAATGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp GTAACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTATTTCCATTGGTGTTTaGCATAACCCCAGTAATTAT +
Preference number: 4 (lower is better)
Translates to: VTRCETPLPLLCSISEGLISIGV*HNPSNY
Trigger: ATAATTACTGGGGTTATGGCAAACACCAATGGAAAT...AAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp TTTCAAAGCATCAGATTCTTTCCCCCACCAGCTGTTAGTGTAACTTCGCAGATGGCTCAGGAAAGCAGTTaGCATATACATTTCCATTGG +
Preference number: 4 (lower is better)
Translates to: FQSIRFFPPPAVSVTSQMAQESS*HIHFHW
Trigger: CCAATGGAAATGTATATGGCAACTGCTTTCCTGAGC...CATCTGCGAAGTTACACTAACAGCTGGTGGGGGAAAGAATCTGATGCTTTGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp TTACTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTTTTTCCATTAGAGGTCCAAAGGCATCAACCTaGAAGCTTGCTTGGTCAACA +
Preference number: 4 (lower is better)
Translates to: LLLTLFAQDLGVPFSIRGPKAST*KLAWST
Trigger: TGTTGACCAAGCAAGCTTCCAGGTTGATGCCTTTGG...ACCTCTAATGGAAAAAGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR CCA 90 bp GATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGTTGCTGAAATTCAGATaGAAGATCATCCAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: DVKLRFLSSVASQRVFVLLLKFR*KIIQGK
Trigger: TTTTCCTTGGATGATCTTCCATCTGAATTTCAGCAA...CAATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp TCAATCTGTCTGCCCTTCTGTTCTTGGCTTGAGCTATGTGGCAACACTGCCCAATTGCTGAAATTCAGATaGAAGATCATCCAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: SICLPFCSWLELCGNTAQLLKFR*KIIQGK
Trigger: TTTTCCTTGGATGATCTTCCATCTGAATTTCAGCAA...TTGGGCAGTGTTGCCACATAGCTCAAGCCAAGAACAGAAGGGCAGACAGATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp AACTTCAGGCCACAAAGGGTTAGAGTATTGGCAAACCAGAAGCTACCAGCTCACATGGATTTTCAGATATaGCAAACTTGTTGTCAGTCG +
Preference number: 4 (lower is better)
Translates to: NFRPQRVRVLANQKLPAHMDFQI*QTCCQS
Trigger: CGACTGACAACAAGTTTGCCATATCTGAAAATCCAT...GTGAGCTGGTAGCTTCTGGTTTGCCAATACTCTAACCCTTTGTGGCCTGAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp AGGTTATTCCTAATCGAAGCTCCGGGTGTCTTGTTAAAAATACAGCAACCACAGATATTAGGGGCACACTaGCTTGAATTTCCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: RLFLIEAPGVLLKIQQPQILGAH*LEFPEH
Trigger: GTGCTCAGGAAATTCAAGCCAGTGTGCCCCTAATAT...CTGTGGTTGCTGTATTTTTAACAAGACACCCGGAGCTTCGATTAGGAATAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp TTTCAAAGCATCAGATTCTTTCCCCCACCAGCTGTTAGTGTAACTTCGCAGATGGAGTTCTCCAAGCCTTaGGATATTGCCAATATTGGT +
Preference number: 4 (lower is better)
Translates to: FQSIRFFPPPAVSVTSQMEFSKP*DIANIG
Trigger: ACCAATATTGGCAATATCCCAAGGCTTGGAGAACTC...CATCTGCGAAGTTACACTAACAGCTGGTGGGGGAAAGAATCTGATGCTTTGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp TTTCAAAGCATCAGATTCTTTCCCCCACCAGCTGTTAGTGTAACTTCGCAGATGACAGTTGATCTTAAATaGATGTCTCCCATAGCCTGG +
Preference number: 4 (lower is better)
Translates to: FQSIRFFPPPAVSVTSQMTVDLK*MSPIAW
Trigger: CCAGGCTATGGGAGACATCCATTTAAGATCAACTGT...CATCTGCGAAGTTACACTAACAGCTGGTGGGGGAAAGAATCTGATGCTTTGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp CTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGTCTGAAGAGCAGATAGATTGTCTCATGTGTCTTTaGTGCACTTGCTTAATCTCA +
Preference number: 4 (lower is better)
Translates to: LSSVASQRVFVLSEEQIDCLMCL*CTCLIS
Trigger: TGAGATTAAGCAAGTGCACCAAAGACACATGAGACA...ATCTATCTGCTCTTCAGACAATACGAAGACCCTCTGAGATGCTACAGAGGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp GGCAGTACGTTGTCTCATGTGTCTTTGGTGCACTTGCTTAATCTCAGCAGCACATGCTACCTACCTCGGTaGATGAAAAGTCATAAATAT +
Preference number: 4 (lower is better)
Translates to: GSTLSHVSLVHLLNLSSTCYLPR*MKSHKY
Trigger: ATATTTATGACTTTTCATCCACCGAGGTAGGTAGCA...TGTGCTGCTGAGATTAAGCAAGTGCACCAAAGACACATGAGACAACGTACTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp TCAATCTGTCTGCCCTTCTGTTCTTGGCTTGAGCTATGTGGCAACACTGCCCAAATACCATATATCTTCTaGTCCGAAGGTAACTGTAAA +
Preference number: 4 (lower is better)
Translates to: SICLPFCSWLELCGNTAQIPYIF*SEGNCK
Trigger: TTTACAGTTACCTTCGGACCAGAAGATATATGGTAT...TTGGGCAGTGTTGCCACATAGCTCAAGCCAAGAACAGAAGGGCAGACAGATTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp ATAGCATTAGCCTTTTGTACACTCAGTACCAGGAAACATTCAGTGCACGTTACATGCCAGTTCCTAACTTaGCTCTCCCCTTCCATATAC +
Preference number: 4 (lower is better)
Translates to: IALAFCTLSTRKHSVHVTCQFLT*LSPSIY
Trigger: GTATATGGAAGGGGAGAGCCAAGTTAGGAACTGGCA...TGTAACGTGCACTGAATGTTTCCTGGTACTGAGTGTACAAAAGGCTAATGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp GAAAGCCCTCACCATGTTGCACTGTCCGATGTATTCCTTTCCACAGATTGCATGGGATACGTAGGAACATaGAATGATGATTACTTGATG +
Preference number: 4 (lower is better)
Translates to: ESPHHVALSDVFLSTDCMGYVGT*NDDYLM
Trigger: CATCAAGTAATCATCATTCCATGTTCCTACGTATCC...CATGCAATCTGTGGAAAGGAATACATCGGACAGTGCAACATGGTGAGGGCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp ATAGCATTAGCCTTTTGTACACTCAGTACCAGGAAACATTCAGTGCACGTTACACACCTCCTCATGGGGTaGCTTCCACTATCTATAGAT +
Preference number: 4 (lower is better)
Translates to: IALAFCTLSTRKHSVHVTHLLMG*LPLSID
Trigger: ATCTATAGATAGTGGAAGCCACCCCATGAGGAGGTG...TGTAACGTGCACTGAATGTTTCCTGGTACTGAGTGTACAAAAGGCTAATGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR CAA 72 bp GGATGTGCCTCAGAACGTCAAGTTCTGAATCCACTATaGTACCTTAGGAAACTTGCTACATTTGGGTCATGT +
Preference number: 4 (lower is better)
Translates to: GCASERQVLNPL*YLRKLATFGSC
Trigger: ACATGACCCAAATGTAGCAAGTTTCCTAAGGTACAATAGTGGATTCAGAACTTGACGTTCTGAGGCACATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR CAA 72 bp AGCAAACTGTGGAGGCCAGAAGTTTTGCTGGGCATTTaGTTCTCTCACTCAACTACTCACTCAATAAAACTG +
Preference number: 4 (lower is better)
Translates to: SKLWRPEVLLGI*FSHSTTHSIKL
Trigger: CAGTTTTATTGAGTGAGTAGTTGAGTGAGAGAACAAAATGCCCAGCAAAACTTCTGGCCTCCACAGTTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp CTGCTTAATTTACTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTTTTTCCGACATCGAGAATGAATaGCGTTCCAAAGGCATCAAC +
Preference number: 4 (lower is better)
Translates to: LLNLLLTLFAQDLGVPFSDIENE*RSKGIN
Trigger: GTTGATGCCTTTGGAACGTCATTCATTCTCGATGTC...GGAAAAAGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATTAAGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR TCA 90 bp TCTATCTGCCATCTGCCATGTCAAATCCTAATTGTGTTATGTAGCAGAAAGGATGCACGACATCGAGAATaGATGACGTTCCAAAGGCAT +
Preference number: 4 (lower is better)
Translates to: SICHLPCQILIVLCSRKDARHRE*MTFQRH
Trigger: ATGCCTTTGGAACGTCATTCATTCTCGATGTCGTGC...ATCCTTTCTGCTACATAACACAATTAGGATTTGACATGGCAGATGGCAGATAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439864.5
CDS-3UTR TCA 90 bp CTGCTTAATTTACTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTTTTTCCTTTCTTCTGGCTCAATaGGATATGTGTGGTTCCCGT +
Preference number: 4 (lower is better)
Translates to: LLNLLLTLFAQDLGVPFSFLLAQ*DMCGSR
Trigger: ACGGGAACCACACATATCTCATTGAGCCAGAAGAAA...GGAAAAAGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATTAAGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR TCA 90 bp CTTAATTTACTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTTTTTCCATTCTTAGAACTAGATGCTaGGTTTGTGCTGACTCCGGG +
Preference number: 4 (lower is better)
Translates to: LNLLLTLFAQDLGVPFSILRTRC*VCADSG
Trigger: CCCGGAGTCAGCACAAACTCAGCATCTAGTTCTAAG...AATGGAAAAAGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR TCA 90 bp CTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTTTTTCCATTAGAGGTTCAATGAGAGAGCCCATTTaGCCTCTTCTTAGAACTAGA +
Preference number: 4 (lower is better)
Translates to: LLTLFAQDLGVPFSIRGSMREPI*PLLRTR
Trigger: TCTAGTTCTAAGAAGAGGTCAAATGGGCTCTCTCAT...TGAACCTCTAATGGAAAAAGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR TCA 90 bp AAAAGTCACTTTATTTGCTACATCTTTCAATCTGTCTGCCCTTCTGTTCTTGGCCTTTCACTCCAAGAATaGGAGAGCCCATTTGACCTC +
Preference number: 4 (lower is better)
Translates to: KSHFICYIFQSVCPSVLGLSLQE*ESPFDL
Trigger: GAGGTCAAATGGGCTCTCTCATTCTTGGAGTGAAAG...GCCAAGAACAGAAGGGCAGACAGATTGAAAGATGTAGCAAATAAAGTGACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp ATAGCATTAGCCTTTTGTACACTCAGTACCAGGAAACATTCAGTGCACGTTACACAGATAGATTTGCAGTaGTTCCATGAGCCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: IALAFCTLSTRKHSVHVTQIDLQ*FHEPGF
Trigger: AAACCCAGGCTCATGGAATCACTGCAAATCTATCTG...TGTAACGTGCACTGAATGTTTCCTGGTACTGAGTGTACAAAAGGCTAATGCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp GAACAAAACTTCAGGCCACAAAGGGTTAGAGTATTGGCAAACCAGAAGCTACCACAGAACGTCAAGTTCTaGATCCACTATTGTACCTTA +
Preference number: 4 (lower is better)
Translates to: EQNFRPQRVRVLANQKLPQNVKF*IHYCTL
Trigger: TAAGGTACAATAGTGGATTCAGAACTTGACGTTCTG...TGGTAGCTTCTGGTTTGCCAATACTCTAACCCTTTGTGGCCTGAAGTTTTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp GGATATCACATGTTTTGGACAAATACGAATTATGGAGAGACACATTTACAGCATAGCAGACCATGTGATTaGGCCCATCAATCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: GYHMFWTNTNYGETHLQHSRPCD*AHQSPA
Trigger: GGCTGGAGATTGATGGGCTCAATCACATGGTCTGCT...ATGCTGTAAATGTGTCTCTCCATAATTCGTATTTGTCCAAAACATGTGATATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp GAACAAAACTTCAGGCCACAAAGGGTTAGAGTATTGGCAAACCAGAAGCTACCAACTGTGCCAGAAATTTaGACCTTAAGTTACAGTGAC +
Preference number: 4 (lower is better)
Translates to: EQNFRPQRVRVLANQKLPTVPEI*TLSYSD
Trigger: GTCACTGTAACTTAAGGTTCAAATTTCTGGCACAGT...TGGTAGCTTCTGGTTTGCCAATACTCTAACCCTTTGTGGCCTGAAGTTTTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp GACTATCTGCTTAATTTACTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTATCACAATCATTTACTaGTTCTCGGCACACAGTGCC +
Preference number: 4 (lower is better)
Translates to: DYLLNLLLTLFAQDLGVPITIIY*FSAHSA
Trigger: GGCACTGTGTGCCGAGAAGCAGTAAATGATTGTGAT...AGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATTAAGCAGATAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR GCA 90 bp TTACTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTTTTTCCATTAGAGGTGCACATCCCGTTTGTTaGACTGTATCCATGTGTCTT +
Preference number: 4 (lower is better)
Translates to: LLLTLFAQDLGVPFSIRGAHPVC*TVSMCL
Trigger: AAGACACATGGATACAGTGCAACAAACGGGATGTGC...ACCTCTAATGGAAAAAGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR GCA 90 bp AAAAGTCACTTTATTTGCTACATCTTTCAATCTGTCTGCCCTTCTGTTCTTGGCTCTCAGGCAGCAGGGTaGCAATCTGTAGTCTTATCA +
Preference number: 4 (lower is better)
Translates to: KSHFICYIFQSVCPSVLGSQAAG*QSVVLS
Trigger: TGATAAGACTACAGATTGGCACCCTGCTGCCTGAGA...GCCAAGAACAGAAGGGCAGACAGATTGAAAGATGTAGCAAATAAAGTGACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp AGGTTATTCCTAATCGAAGCTCCGGGTGTCTTGTTAAAAATACAGCAACCACAGAGAAGTTGCTCCATTTaGGGGACTAACAAAGCAATG +
Preference number: 4 (lower is better)
Translates to: RLFLIEAPGVLLKIQQPQRSCSI*GTNKAM
Trigger: CATTGCTTTGTTAGTCCCGCAAATGGAGCAACTTCT...CTGTGGTTGCTGTATTTTTAACAAGACACCCGGAGCTTCGATTAGGAATAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp GGCAGTACGTTGTCTCATGTGTCTTTGGTGCACTTGCTTAATCTCAGCAGCACAATAATACCAATATTATaGGCTAATGACTGGGCAAGT +
Preference number: 4 (lower is better)
Translates to: GSTLSHVSLVHLLNLSSTIIPIL*ANDWAS
Trigger: ACTTGCCCAGTCATTAGCCCATAATATTGGTATTAT...TGTGCTGCTGAGATTAAGCAAGTGCACCAAAGACACATGAGACAACGTACTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp GAAAGCCCTCACCATGTTGCACTGTCCGATGTATTCCTTTCCACAGATTGCATGATAATACCAATATTATaGGCTAATGACTGGGCAAGT +
Preference number: 4 (lower is better)
Translates to: ESPHHVALSDVFLSTDCMIIPIL*ANDWAS
Trigger: ACTTGCCCAGTCATTAGCCCATAATATTGGTATTAT...CATGCAATCTGTGGAAAGGAATACATCGGACAGTGCAACATGGTGAGGGCTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp CTGCTTAATTTACTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTTTTTCCATATTAGGGGCACACTaGCTTGAATTTCCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: LLNLLLTLFAQDLGVPFSILGAH*LEFPEH
Trigger: GTGCTCAGGAAATTCAAGCCAGTGTGCCCCTAATAT...GGAAAAAGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATTAAGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR CCA 90 bp AAAAGTCACTTTATTTGCTACATCTTTCAATCTGTCTGCCCTTCTGTTCTTGGCGGGCCAGCACTAAAATaGTGCCAGCAATTATGCCTA +
Preference number: 4 (lower is better)
Translates to: KSHFICYIFQSVCPSVLGGPALK*CQQLCL
Trigger: TAGGCATAATTGCTGGCACCATTTTAGTGCTGGCCC...GCCAAGAACAGAAGGGCAGACAGATTGAAAGATGTAGCAAATAAAGTGACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp AGGTTATTCCTAATCGAAGCTCCGGGTGTCTTGTTAAAAATACAGCAACCACAGGTCTTTGAAGATCACTaGATGGATGACGATGATGTG +
Preference number: 4 (lower is better)
Translates to: RLFLIEAPGVLLKIQQPQVFEDH*MDDDDV
Trigger: CACATCATCGTCATCCATCCAGTGATCTTCAAAGAC...CTGTGGTTGCTGTATTTTTAACAAGACACCCGGAGCTTCGATTAGGAATAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp AGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGACAAATACGAATTATaGAGAGACACATTTACAGCA +
Preference number: 4 (lower is better)
Translates to: RCETPLPLLCSISEGLRIDKYEL*RDTFTA
Trigger: TGCTGTAAATGTGTCTCTCCATAATTCGTATTTGTC...AATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp CTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGTCTGAAGAGCAGATAGATTTAACCCTTTATGAATaGTTGAAGCTGCTCAACTCA +
Preference number: 4 (lower is better)
Translates to: LSSVASQRVFVLSEEQIDLTLYE*LKLLNS
Trigger: TGAGTTGAGCAGCTTCAACCATTCATAAAGGGTTAA...ATCTATCTGCTCTTCAGACAATACGAAGACCCTCTGAGATGCTACAGAGGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp TTTCAAAGCATCAGATTCTTTCCCCCACCAGCTGTTAGTGTAACTTCGCAGATGGATGCTGCATCTCTGTaGTTTAGATCTAACTTAACC +
Preference number: 4 (lower is better)
Translates to: FQSIRFFPPPAVSVTSQMDAASL*FRSNLT
Trigger: GGTTAAGTTAGATCTAAACCACAGAGATGCAGCATC...CATCTGCGAAGTTACACTAACAGCTGGTGGGGGAAAGAATCTGATGCTTTGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp CATGCCAGGAGAAAAGTTGCTGCATCCAAAACCAGAGTAGTCTTATCCATTCAAGTGACTGGCCTATTATaGACTGGACCACAAAGTATT +
Preference number: 4 (lower is better)
Translates to: HARRKVAASKTRVVLSIQVTGLL*TGPQSI
Trigger: AATACTTTGTGGTCCAGTCCATAATAGGCCAGTCAC...TTGAATGGATAAGACTACTCTGGTTTTGGATGCAGCAACTTTTCTCCTGGCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp GGATATCACATGTTTTGGACAAATACGAATTATGGAGAGACACATTTACAGCATTCAGGCAGGAGTGACTaGCCTATTATGGACTGGACC +
Preference number: 4 (lower is better)
Translates to: GYHMFWTNTNYGETHLQHSGRSD*PIMDWT
Trigger: GGTCCAGTCCATAATAGGCCAGTCACTCCTGCCTGA...ATGCTGTAAATGTGTCTCTCCATAATTCGTATTTGTCCAAAACATGTGATATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp AAAAGTCACTTTATTTGCTACATCTTTCAATCTGTCTGCCCTTCTGTTCTTGGCCACCTCCTCATGGGGTaGCTTCCACTATCTATAGAT +
Preference number: 4 (lower is better)
Translates to: KSHFICYIFQSVCPSVLGHLLMG*LPLSID
Trigger: ATCTATAGATAGTGGAAGCCACCCCATGAGGAGGTG...GCCAAGAACAGAAGGGCAGACAGATTGAAAGATGTAGCAAATAAAGTGACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp TATCTGCTTAATTTACTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTTTTGCACGACATCGAGAATaGATGACGTTCCAAAGGCAT +
Preference number: 4 (lower is better)
Translates to: YLLNLLLTLFAQDLGVPFARHRE*MTFQRH
Trigger: ATGCCTTTGGAACGTCATTCATTCTCGATGTCGTGC...AAAAGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATTAAGCAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR TCA 90 bp CTTAATTTACTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTTTTTCCATTCTTTCACTCCAAGAATaGGAGAGCCCATTTGACCTC +
Preference number: 4 (lower is better)
Translates to: LNLLLTLFAQDLGVPFSILSLQE*ESPFDL
Trigger: GAGGTCAAATGGGCTCTCTCATTCTTGGAGTGAAAG...AATGGAAAAAGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR TCA 90 bp ATAGCATTAGCCTTTTGTACACTCAGTACCAGGAAACATTCAGTGCACGTTACAGGTCTTCGTATTGTCTaGAGAGCAGATAGATTTGCA +
Preference number: 4 (lower is better)
Translates to: IALAFCTLSTRKHSVHVTGLRIV*RADRFA
Trigger: TGCAAATCTATCTGCTCTTCAGACAATACGAAGACC...TGTAACGTGCACTGAATGTTTCCTGGTACTGAGTGTACAAAAGGCTAATGCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp GAACAAAACTTCAGGCCACAAAGGGTTAGAGTATTGGCAAACCAGAAGCTACCACATCCCTTCCTGTCATaGAAAATGCTGTTTTACATT +
Preference number: 4 (lower is better)
Translates to: EQNFRPQRVRVLANQKLPHPFLS*KMLFYI
Trigger: AATGTAAAACAGCATTTTTCATGACAGGAAGGGATG...TGGTAGCTTCTGGTTTGCCAATACTCTAACCCTTTGTGGCCTGAAGTTTTGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp TTACTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTTTTTCCATTAGAGGTACTTCAGCTCATTACTaGAAACTCCATTTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: LLLTLFAQDLGVPFSIRGTSAHY*KLHFLS
Trigger: GCTCAGGAAATGGAGTTTGCAGTAATGAGCTGAAGT...ACCTCTAATGGAAAAAGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR GCA 90 bp GACTATCTGCTTAATTTACTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTGAGGGAAGTAAGTGTTaGAATCAGAACCTATCCAGT +
Preference number: 4 (lower is better)
Translates to: DYLLNLLLTLFAQDLGVPEGSKC*NQNLSS
Trigger: ACTGGATAGGTTCTGATTGCAACACTTACTTCCCTC...AGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATTAAGCAGATAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR GCA 90 bp CATGCCAGGAGAAAAGTTGCTGCATCCAAAACCAGAGTAGTCTTATCCATTCAACCAGCACTAAAATGGTaGCAGCAATTATGCCTATTA +
Preference number: 4 (lower is better)
Translates to: HARRKVAASKTRVVLSIQPALKW*QQLCLL
Trigger: TAATAGGCATAATTGCTGGCACCATTTTAGTGCTGG...TTGAATGGATAAGACTACTCTGGTTTTGGATGCAGCAACTTTTCTCCTGGCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp ATAGCATTAGCCTTTTGTACACTCAGTACCAGGAAACATTCAGTGCACGTTACACTCATGTGTCTTTGGTaGACTTGCTTAATCTCAGCA +
Preference number: 4 (lower is better)
Translates to: IALAFCTLSTRKHSVHVTLMCLW*TCLISA
Trigger: TGCTGAGATTAAGCAAGTGCACCAAAGACACATGAG...TGTAACGTGCACTGAATGTTTCCTGGTACTGAGTGTACAAAAGGCTAATGCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp GGATATCACATGTTTTGGACAAATACGAATTATGGAGAGACACATTTACAGCATTCCACAGATTGCATGTaGCCTGGGGATCATTTCCAG +
Preference number: 4 (lower is better)
Translates to: GYHMFWTNTNYGETHLQHSTDCM*PGDHFQ
Trigger: CTGGAAATGATCCCCAGGGCACATGCAATCTGTGGA...ATGCTGTAAATGTGTCTCTCCATAATTCGTATTTGTCCAAAACATGTGATATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp CATGCCAGGAGAAAAGTTGCTGCATCCAAAACCAGAGTAGTCTTATCCATTCAATCCACTATCTATAGATaGACATCACCTGTCAAAGGT +
Preference number: 4 (lower is better)
Translates to: HARRKVAASKTRVVLSIQSTIYR*TSPVKG
Trigger: ACCTTTGACAGGTGATGTGCATCTATAGATAGTGGA...TTGAATGGATAAGACTACTCTGGTTTTGGATGCAGCAACTTTTCTCCTGGCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp CTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGTCTGAAGAGCAGATAGATATTTCCATTGGTGTTTaGCATAACCCCAGTAATTAT +
Preference number: 4 (lower is better)
Translates to: LSSVASQRVFVLSEEQIDISIGV*HNPSNY
Trigger: ATAATTACTGGGGTTATGGCAAACACCAATGGAAAT...ATCTATCTGCTCTTCAGACAATACGAAGACCCTCTGAGATGCTACAGAGGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp TTTGACTATCTGCTTAATTTACTTTTGACACTATTTGCACAGGACCTTGGAGTGTCTAAGCACATCATTTaGGGACCACAAGGTGTCCCA +
Preference number: 4 (lower is better)
Translates to: FDYLLNLLLTLFAQDLGVSKHII*GPQGVP
Trigger: TGGGACACCTTGTGGTCCCCAAATGATGTGCTTAGA...CACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATTAAGCAGATAGTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR CCA 90 bp TTTCAAAGCATCAGATTCTTTCCCCCACCAGCTGTTAGTGTAACTTCGCAGATGTGCTACCTACCTCGGTaGATGAAAAGTCATAAATAT +
Preference number: 4 (lower is better)
Translates to: FQSIRFFPPPAVSVTSQMCYLPR*MKSHKY
Trigger: ATATTTATGACTTTTCATCCACCGAGGTAGGTAGCA...CATCTGCGAAGTTACACTAACAGCTGGTGGGGGAAAGAATCTGATGCTTTGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp AGGTTATTCCTAATCGAAGCTCCGGGTGTCTTGTTAAAAATACAGCAACCACAGCCTGTTCACACTTACTaGAGAGACTTAAATGTTCCT +
Preference number: 4 (lower is better)
Translates to: RLFLIEAPGVLLKIQQPQPVHTY*RDLNVP
Trigger: AGGAACATTTAAGTCTCTCCAGTAAGTGTGAACAGG...CTGTGGTTGCTGTATTTTTAACAAGACACCCGGAGCTTCGATTAGGAATAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp CATGCCAGGAGAAAAGTTGCTGCATCCAAAACCAGAGTAGTCTTATCCATTCAATTCACAAGAGCAGACTaGGCCCCTCATTATATTATA +
Preference number: 4 (lower is better)
Translates to: HARRKVAASKTRVVLSIQFTRAD*APHYII
Trigger: TATAATATAATGAGGGGCCCAGTCTGCTCTTGTGAA...TTGAATGGATAAGACTACTCTGGTTTTGGATGCAGCAACTTTTCTCCTGGCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp ATAGCATTAGCCTTTTGTACACTCAGTACCAGGAAACATTCAGTGCACGTTACAGTGACTGGCCTATTATaGACTGGACCACAAAGTATT +
Preference number: 4 (lower is better)
Translates to: IALAFCTLSTRKHSVHVTVTGLL*TGPQSI
Trigger: AATACTTTGTGGTCCAGTCCATAATAGGCCAGTCAC...TGTAACGTGCACTGAATGTTTCCTGGTACTGAGTGTACAAAAGGCTAATGCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp CTGCTTAATTTACTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTTTTTCCTATCCATCCATTTTATaGATATTAGGGGCACACTGG +
Preference number: 4 (lower is better)
Translates to: LLNLLLTLFAQDLGVPFSYPSIL*ILGAHW
Trigger: CCAGTGTGCCCCTAATATTCATAAAATGGATGGATA...GGAAAAAGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATTAAGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR TCA 90 bp AATTTACTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTTTTTCCATTAGACATTGCCAGACAGAGTaGTACCAGTCTTTGCATCAT +
Preference number: 4 (lower is better)
Translates to: NLLLTLFAQDLGVPFSIRHCQTE*YQSLHH
Trigger: ATGATGCAAAGACTGGTATCACTCTGTCTGGCAATG...TCTAATGGAAAAAGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR TCA 90 bp GGATATCACATGTTTTGGACAAATACGAATTATGGAGAGACACATTTACAGCATAATGGTAACCAGATGTaGAACTCCGCTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: GYHMFWTNTNYGETHLQHNGNQM*NSASSP
Trigger: AGGAGAGGAAGCGGAGTTTCACATCTGGTTACCATT...ATGCTGTAAATGTGTCTCTCCATAATTCGTATTTGTCCAAAACATGTGATATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp AGGTTATTCCTAATCGAAGCTCCGGGTGTCTTGTTAAAAATACAGCAACCACAGTTTACTGCACTGCAATaGCTATGGATAAATGGAACT +
Preference number: 4 (lower is better)
Translates to: RLFLIEAPGVLLKIQQPQFTALQ*LWINGT
Trigger: AGTTCCATTTATCCATAGTCATTGCAGTGCAGTAAA...CTGTGGTTGCTGTATTTTTAACAAGACACCCGGAGCTTCGATTAGGAATAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp TCTATCTGCCATCTGCCATGTCAAATCCTAATTGTGTTATGTAGCAGAAAGGATATCAACCTGGAAGCTTaGTTGGTCAACATGAGTCAA +
Preference number: 4 (lower is better)
Translates to: SICHLPCQILIVLCSRKDINLEA*LVNMSQ
Trigger: TTGACTCATGTTGACCAAGCAAGCTTCCAGGTTGAT...ATCCTTTCTGCTACATAACACAATTAGGATTTGACATGGCAGATGGCAGATAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439864.5
CDS-3UTR GCA 90 bp ATAGCATTAGCCTTTTGTACACTCAGTACCAGGAAACATTCAGTGCACGTTACAAGTCTTGAGTCAAGGTaGATTTCTTACAACACTCTG +
Preference number: 4 (lower is better)
Translates to: IALAFCTLSTRKHSVHVTSLESR*ISYNTL
Trigger: CAGAGTGTTGTAAGAAATGCACCTTGACTCAAGACT...TGTAACGTGCACTGAATGTTTCCTGGTACTGAGTGTACAAAAGGCTAATGCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp CTGCTTAATTTACTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTTTTTCCCCAGCACTAAAATGGTaGCAGCAATTATGCCTATTA +
Preference number: 4 (lower is better)
Translates to: LLNLLLTLFAQDLGVPFSPALKW*QQLCLL
Trigger: TAATAGGCATAATTGCTGGCACCATTTTAGTGCTGG...GGAAAAAGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATTAAGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR GCA 90 bp TTGTGTTACTTGTTCAACTTAGCACCGCTATATTTAAAGATTGGGGCTATTTGCACACACAGTATAAAATaGTGCCTTCTAACTCGGCCC +
Preference number: 4 (lower is better)
Translates to: LCYLFNLAPLYLKIGAICTHSIK*CLLTRP
Trigger: GGGCCGAGTTAGAAGGCAGCATTTTATACTGTGTGT...GCAAATAGCCCCAATCTTTAAATATAGCGGTGCTAAGTTGAACAAGTAACACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp AGCAATCTATACTTGAAAACTTTTTCCAAATCTATCTGCCATCTGCCATGTCAACCAAAGGCATCAACCTaGAAGCTTGCTTGGTCAACA +
Preference number: 4 (lower is better)
Translates to: SNLYLKTFSKSICHLPCQPKAST*KLAWST
Trigger: TGTTGACCAAGCAAGCTTCCAGGTTGATGCCTTTGG...TTGACATGGCAGATGGCAGATAGATTTGGAAAAAGTTTTCAAGTATAGATTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439864.5
CDS-3UTR CCA 90 bp TTACTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTTTTTCCATTAGAGGTATTTCGCATAGGTATTaGTATGTACAACGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: LLLTLFAQDLGVPFSIRGISHRY*YVQRKA
Trigger: GGCTTTCCGTTGTACATACCAATACCTATGCGAAAT...ACCTCTAATGGAAAAAGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR CCA 90 bp AAAAGTCACTTTATTTGCTACATCTTTCAATCTGTCTGCCCTTCTGTTCTTGGCGAGTTCTCCAAGCCTTaGGATATTGCCAATATTGGT +
Preference number: 4 (lower is better)
Translates to: KSHFICYIFQSVCPSVLGEFSKP*DIANIG
Trigger: ACCAATATTGGCAATATCCCAAGGCTTGGAGAACTC...GCCAAGAACAGAAGGGCAGACAGATTGAAAGATGTAGCAAATAAAGTGACTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp TTCTTTGACTATCTGCTTAATTTACTTTTGACACTATTTGCACAGGACCTTGGAGGGCCAGCACTAAAATaGTGCCAGCAATTATGCCTA +
Preference number: 4 (lower is better)
Translates to: FFDYLLNLLLTLFAQDLGGPALK*CQQLCL
Trigger: TAGGCATAATTGCTGGCACCATTTTAGTGCTGGCCC...TCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATTAAGCAGATAGTCAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR TCA 90 bp TCTGAGACAGACACAAAATCACTTCTCTGGTATTTCTGCCAAAAATACATATCTGACATCGAGAATGAATaGCGTTCCAAAGGCATCAAC +
Preference number: 4 (lower is better)
Translates to: SETDTKSLLWYFCQKYISDIENE*RSKGIN
Trigger: GTTGATGCCTTTGGAACGTCATTCATTCTCGATGTC...AGATATGTATTTTTGGCAGAAATACCAGAGAAGTGATTTTGTGTCTGTCTCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439864.5
CDS-3UTR TCA 90 bp TCTGAGACAGACACAAAATCACTTCTCTGGTATTTCTGCCAAAAATACATATCTTTTCTTCTGGCTCAATaGGATATGTGTGGTTCCCGT +
Preference number: 4 (lower is better)
Translates to: SETDTKSLLWYFCQKYISFLLAQ*DMCGSR
Trigger: ACGGGAACCACACATATCTCATTGAGCCAGAAGAAA...AGATATGTATTTTTGGCAGAAATACCAGAGAAGTGATTTTGTGTCTGTCTCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000439864.5
CDS-3UTR TCA 90 bp CTTAATTTACTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTTTTTCCATTATAGCAATATTTGTCTaGTGCTGTCACCTTTTGCCC +
Preference number: 4 (lower is better)
Translates to: LNLLLTLFAQDLGVPFSIIAIFV*CCHLLP
Trigger: GGGCAAAAGGTGACAGCATCAGACAAATATTGCTAT...AATGGAAAAAGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATTAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR TCA 90 bp AATTTACTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTTTTTCCATTAGAGCAAACTCCATTTCCTaGGCAAATAGTGCCTTCTTT +
Preference number: 4 (lower is better)
Translates to: NLLLTLFAQDLGVPFSIRANSIS*ANSAFF
Trigger: AAAGAAGGCACTATTTGCTCAGGAAATGGAGTTTGC...TCTAATGGAAAAAGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR TCA 90 bp TTACTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTTTTTCCATTAGAGGTTGCTTAATTTACTTTTaGCACTATTTGCACAGGACC +
Preference number: 4 (lower is better)
Translates to: LLLTLFAQDLGVPFSIRGCLIYF*HYLHRT
Trigger: GGTCCTGTGCAAATAGTGTCAAAAGTAAATTAAGCA...ACCTCTAATGGAAAAAGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR GCA 90 bp TTGTGTTACTTGTTCAACTTAGCACCGCTATATTTAAAGATTGGGGCTATTTGCTGCCTTAGCCCTGCATaGTCATTTCTATTATGGGAT +
Preference number: 4 (lower is better)
Translates to: LCYLFNLAPLYLKIGAICCLSPA*SFLLWD
Trigger: ATCCCATAATAGAAATGAGCATGCAGGGCTAAGGCA...GCAAATAGCCCCAATCTTTAAATATAGCGGTGCTAAGTTGAACAAGTAACACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp AATTTACTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTTTTTCCATTAGATTATGGGCTAATGACTaGGCAAGTGTAACAGCCATT +
Preference number: 4 (lower is better)
Translates to: NLLLTLFAQDLGVPFSIRLWAND*ASVTAI
Trigger: AATGGCTGTTACACTTGCCCAGTCATTAGCCCATAA...TCTAATGGAAAAAGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR CCA 90 bp CATGCCAGGAGAAAAGTTGCTGCATCCAAAACCAGAGTAGTCTTATCCATTCAATTTAAAGTTAGCCTATaGGATATTGGCCTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: HARRKVAASKTRVVLSIQFKVSL*DIGLSK
Trigger: CTTTGAAAGGCCAATATCCCATAGGCTAACTTTAAA...TTGAATGGATAAGACTACTCTGGTTTTGGATGCAGCAACTTTTCTCCTGGCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp GGATATCACATGTTTTGGACAAATACGAATTATGGAGAGACACATTTACAGCATGGCCAGAAGTTTTGCTaGGCATTTTGTTCTCTCACT +
Preference number: 4 (lower is better)
Translates to: GYHMFWTNTNYGETHLQHGQKFC*AFCSLT
Trigger: AGTGAGAGAACAAAATGCCCAGCAAAACTTCTGGCC...ATGCTGTAAATGTGTCTCTCCATAATTCGTATTTGTCCAAAACATGTGATATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp AAAAGTCACTTTATTTGCTACATCTTTCAATCTGTCTGCCCTTCTGTTCTTGGCTTCACAAGAGCAGACTaGGCCCCTCATTATATTATA +
Preference number: 4 (lower is better)
Translates to: KSHFICYIFQSVCPSVLGFTRAD*APHYII
Trigger: TATAATATAATGAGGGGCCCAGTCTGCTCTTGTGAA...GCCAAGAACAGAAGGGCAGACAGATTGAAAGATGTAGCAAATAAAGTGACTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp TCTATCTGCCATCTGCCATGTCAAATCCTAATTGTGTTATGTAGCAGAAAGGATTGTGTGATCCTGGATTaGATTTGGATGGGGAAAATT +
Preference number: 4 (lower is better)
Translates to: SICHLPCQILIVLCSRKDCVILD*IWMGKI
Trigger: AATTTTCCCCATCCAAATCCAATCCAGGATCACACA...ATCCTTTCTGCTACATAACACAATTAGGATTTGACATGGCAGATGGCAGATAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439864.5
3UTR CAA 72 bp CCAGACTGTGCACAGGTTAAAGGGATATCACATGTTTaGGACAAATACGAATTATGGAGAGACACATTTACA +
Preference number: 4 (lower is better)
Translates to: PDCAQVKGISHV*DKYELWRDTFT
Trigger: TGTAAATGTGTCTCTCCATAATTCGTATTTGTCCAAAACATGTGATATCCCTTTAACCTGTGCACAGTCTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
3UTR CAA 72 bp CTGTGGTTTAGATCTAACTTAACCCTTTATGAATGGTaGAAGCTGCTCAACTCAAACAGTAGAATCTTCCGT +
Preference number: 4 (lower is better)
Translates to: LWFRSNLTLYEW*KLLNSNSRIFR
Trigger: ACGGAAGATTCTACTGTTTGAGTTGAGCAGCTTCAACCATTCATAAAGGGTTAAGTTAGATCTAAACCACAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR TCA 90 bp TTTGACTATCTGCTTAATTTACTTTTGACACTATTTGCACAGGACCTTGGAGTGCAATTATGCCTATTATaGTATTGGTGCCAGCAACAC +
Preference number: 4 (lower is better)
Translates to: FDYLLNLLLTLFAQDLGVQLCLL*YWCQQH
Trigger: GTGTTGCTGGCACCAATATCATAATAGGCATAATTG...CACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATTAAGCAGATAGTCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR TCA 90 bp TTCTTTGACTATCTGCTTAATTTACTTTTGACACTATTTGCACAGGACCTTGGACAGTTATTCCTAATATaGGGGCCAGCACTAAAATGG +
Preference number: 4 (lower is better)
Translates to: FFDYLLNLLLTLFAQDLGQLFLI*GPALKW
Trigger: CCATTTTAGTGCTGGCCCTCATATTAGGAATAACTG...TCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATTAAGCAGATAGTCAAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR TCA 90 bp AATTTACTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTTTTTCCATTAGATCAGACTTACTCAGTTaGATTAGACCGAGGTCTAAA +
Preference number: 4 (lower is better)
Translates to: NLLLTLFAQDLGVPFSIRSDLLS*IRPRSK
Trigger: TTTAGACCTCGGTCTAATTCAACTGAGTAAGTCTGA...TCTAATGGAAAAAGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR GCA 90 bp TTCTTTGACTATCTGCTTAATTTACTTTTGACACTATTTGCACAGGACCTTGGAATCAACCTGGAAGCTTaGTTGGTCAACATGAGTCAA +
Preference number: 4 (lower is better)
Translates to: FFDYLLNLLLTLFAQDLGINLEA*LVNMSQ
Trigger: TTGACTCATGTTGACCAAGCAAGCTTCCAGGTTGAT...TCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATTAAGCAGATAGTCAAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR GCA 90 bp TTGTGTTACTTGTTCAACTTAGCACCGCTATATTTAAAGATTGGGGCTATTTGCAGTCTTGAGTCAAGGTaGATTTCTTACAACACTCTG +
Preference number: 4 (lower is better)
Translates to: LCYLFNLAPLYLKIGAICSLESR*ISYNTL
Trigger: CAGAGTGTTGTAAGAAATGCACCTTGACTCAAGACT...GCAAATAGCCCCAATCTTTAAATATAGCGGTGCTAAGTTGAACAAGTAACACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp GGATATCACATGTTTTGGACAAATACGAATTATGGAGAGACACATTTACAGCATGAGGGAAGTAAGTGTTaGAATCAGAACCTATCCAGT +
Preference number: 4 (lower is better)
Translates to: GYHMFWTNTNYGETHLQHEGSKC*NQNLSS
Trigger: ACTGGATAGGTTCTGATTGCAACACTTACTTCCCTC...ATGCTGTAAATGTGTCTCTCCATAATTCGTATTTGTCCAAAACATGTGATATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp CTTAATTTACTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTTTTTCCATTAGTGATACCAGTCTTTaGATCATCATTGTGAGGGAA +
Preference number: 4 (lower is better)
Translates to: LNLLLTLFAQDLGVPFSISDTSL*IIIVRE
Trigger: TTCCCTCACAATGATGATGCAAAGACTGGTATCACT...AATGGAAAAAGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATTAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR GCA 90 bp GGATATCACATGTTTTGGACAAATACGAATTATGGAGAGACACATTTACAGCATATCTTTCAATCTGTCTaGCCTTCTGTTCTTGGCTTG +
Preference number: 4 (lower is better)
Translates to: GYHMFWTNTNYGETHLQHIFQSV*PSVLGL
Trigger: CAAGCCAAGAACAGAAGGGCAGACAGATTGAAAGAT...ATGCTGTAAATGTGTCTCTCCATAATTCGTATTTGTCCAAAACATGTGATATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp TCTATCTGCCATCTGCCATGTCAAATCCTAATTGTGTTATGTAGCAGAAAGGATTTTTCCAAATCTATCTaGCATCTGCCATGTCAAATC +
Preference number: 4 (lower is better)
Translates to: SICHLPCQILIVLCSRKDFSKSI*HLPCQI
Trigger: GATTTGACATGGCAGATGGCAGATAGATTTGGAAAA...ATCCTTTCTGCTACATAACACAATTAGGATTTGACATGGCAGATGGCAGATAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439864.5
CDS-3UTR CCA 90 bp GACTATCTGCTTAATTTACTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTTTGCTGAAATTCAGATaGAAGATCATCCAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: DYLLNLLLTLFAQDLGVPLLKFR*KIIQGK
Trigger: TTTTCCTTGGATGATCTTCCATCTGAATTTCAGCAA...AGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATTAAGCAGATAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR CCA 90 bp TCTATCTGCCATCTGCCATGTCAAATCCTAATTGTGTTATGTAGCAGAAAGGATATGGATTTTCAGATATaGCAAACTTGTTGTCAGTCG +
Preference number: 4 (lower is better)
Translates to: SICHLPCQILIVLCSRKDMDFQI*QTCCQS
Trigger: CGACTGACAACAAGTTTGCCATATCTGAAAATCCAT...ATCCTTTCTGCTACATAACACAATTAGGATTTGACATGGCAGATGGCAGATAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439864.5
CDS-3UTR CCA 90 bp TTCTTTGACTATCTGCTTAATTTACTTTTGACACTATTTGCACAGGACCTTGGAGAGTTCTCCAAGCCTTaGGATATTGCCAATATTGGT +
Preference number: 4 (lower is better)
Translates to: FFDYLLNLLLTLFAQDLGEFSKP*DIANIG
Trigger: ACCAATATTGGCAATATCCCAAGGCTTGGAGAACTC...TCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATTAAGCAGATAGTCAAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR CCA 90 bp GGATATCACATGTTTTGGACAAATACGAATTATGGAGAGACACATTTACAGCATACAGTTGATCTTAAATaGATGTCTCCCATAGCCTGG +
Preference number: 4 (lower is better)
Translates to: GYHMFWTNTNYGETHLQHTVDLK*MSPIAW
Trigger: CCAGGCTATGGGAGACATCCATTTAAGATCAACTGT...ATGCTGTAAATGTGTCTCTCCATAATTCGTATTTGTCCAAAACATGTGATATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp TTGTGTTACTTGTTCAACTTAGCACCGCTATATTTAAAGATTGGGGCTATTTGCCCTGTTCACACTTACTaGAGAGACTTAAATGTTCCT +
Preference number: 4 (lower is better)
Translates to: LCYLFNLAPLYLKIGAICPVHTY*RDLNVP
Trigger: AGGAACATTTAAGTCTCTCCAGTAAGTGTGAACAGG...GCAAATAGCCCCAATCTTTAAATATAGCGGTGCTAAGTTGAACAAGTAACACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp TCTATCTGCCATCTGCCATGTCAAATCCTAATTGTGTTATGTAGCAGAAAGGATATCCTGGATTGGATTTaGATGGGGAAAATTAGCTTT +
Preference number: 4 (lower is better)
Translates to: SICHLPCQILIVLCSRKDILDWI*MGKISF
Trigger: AAAGCTAATTTTCCCCATCCAAATCCAATCCAGGAT...ATCCTTTCTGCTACATAACACAATTAGGATTTGACATGGCAGATGGCAGATAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439864.5
CDS-3UTR TCA 90 bp AATTTACTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTTTTTCCATTAGACTGAACACCATCACATaGATATCCATCCATTTTATG +
Preference number: 4 (lower is better)
Translates to: NLLLTLFAQDLGVPFSIRLNTIT*ISIHFM
Trigger: CATAAAATGGATGGATATTCATGTGATGGTGTTCAG...TCTAATGGAAAAAGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR TCA 90 bp GGATATCACATGTTTTGGACAAATACGAATTATGGAGAGACACATTTACAGCATCATATTGCCTGGTTTTaGTTTCAAGGATACGTAGGA +
Preference number: 4 (lower is better)
Translates to: GYHMFWTNTNYGETHLQHHIAWF*FQGYVG
Trigger: TCCTACGTATCCTTGAAATCAAAACCAGGCAATATG...ATGCTGTAAATGTGTCTCTCCATAATTCGTATTTGTCCAAAACATGTGATATCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp TTCTTTGACTATCTGCTTAATTTACTTTTGACACTATTTGCACAGGACCTTGGAAGTCTTGAGTCAAGGTaGATTTCTTACAACACTCTG +
Preference number: 4 (lower is better)
Translates to: FFDYLLNLLLTLFAQDLGSLESR*ISYNTL
Trigger: CAGAGTGTTGTAAGAAATGCACCTTGACTCAAGACT...TCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATTAAGCAGATAGTCAAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR GCA 90 bp TTCTTTGACTATCTGCTTAATTTACTTTTGACACTATTTGCACAGGACCTTGGAGTCTATCTCTGGTTTTaGATCTTCCTCCAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: FFDYLLNLLLTLFAQDLGVYLWF*IFLQSK
Trigger: TTTGCTTTGGAGGAAGATGCAAAACCAGAGATAGAC...TCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATTAAGCAGATAGTCAAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR GCA 90 bp CTTAATTTACTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTTTTTCCATTCAAGCCTTGGGATATTaGCAATATTGGTACACAAAA +
Preference number: 4 (lower is better)
Translates to: LNLLLTLFAQDLGVPFSIQALGY*QYWYTK
Trigger: TTTTGTGTACCAATATTGGCAATATCCCAAGGCTTG...AATGGAAAAAGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATTAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR GCA 90 bp TTGTGTTACTTGTTCAACTTAGCACCGCTATATTTAAAGATTGGGGCTATTTGCCAAGCCTTGGGATATTaGCAATATTGGTACACAAAA +
Preference number: 4 (lower is better)
Translates to: LCYLFNLAPLYLKIGAICQALGY*QYWYTK
Trigger: TTTTGTGTACCAATATTGGCAATATCCCAAGGCTTG...GCAAATAGCCCCAATCTTTAAATATAGCGGTGCTAAGTTGAACAAGTAACACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp CTTAATTTACTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTTTTTCCATTAATGTTCTTCCTTGCTaGACAACTAAAGTAGATGTG +
Preference number: 4 (lower is better)
Translates to: LNLLLTLFAQDLGVPFSINVLPC*TTKVDV
Trigger: CACATCTACTTTAGTTGTGCAGCAAGGAAGAACATT...AATGGAAAAAGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATTAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR GCA 90 bp TTCTTTGACTATCTGCTTAATTTACTTTTGACACTATTTGCACAGGACCTTGGATCTTCAAGCTTAACATaGCCACCACTGCAGTTTAAT +
Preference number: 4 (lower is better)
Translates to: FFDYLLNLLLTLFAQDLGSSSLT*PPLQFN
Trigger: ATTAAACTGCAGTGGTGGGCATGTTAAGCTTGAAGA...TCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATTAAGCAGATAGTCAAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR GCA 90 bp GGATATCACATGTTTTGGACAAATACGAATTATGGAGAGACACATTTACAGCATAGTGATACCAGTCTTTaGATCATCATTGTGAGGGAA +
Preference number: 4 (lower is better)
Translates to: GYHMFWTNTNYGETHLQHSDTSL*IIIVRE
Trigger: TTCCCTCACAATGATGATGCAAAGACTGGTATCACT...ATGCTGTAAATGTGTCTCTCCATAATTCGTATTTGTCCAAAACATGTGATATCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp AGCAATCTATACTTGAAAACTTTTTCCAAATCTATCTGCCATCTGCCATGTCAAATTTCGCATAGGTATTaGTATGTACAACGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: SNLYLKTFSKSICHLPCQISHRY*YVQRKA
Trigger: GGCTTTCCGTTGTACATACCAATACCTATGCGAAAT...TTGACATGGCAGATGGCAGATAGATTTGGAAAAAGTTTTCAAGTATAGATTGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439864.5
CDS-3UTR CCA 90 bp CTTAATTTACTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTTTTTCCATTATGGATTTTCAGATATaGCAAACTTGTTGTCAGTCG +
Preference number: 4 (lower is better)
Translates to: LNLLLTLFAQDLGVPFSIMDFQI*QTCCQS
Trigger: CGACTGACAACAAGTTTGCCATATCTGAAAATCCAT...AATGGAAAAAGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATTAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR CCA 90 bp AAAAGTCACTTTATTTGCTACATCTTTCAATCTGTCTGCCCTTCTGTTCTTGGCTTTAAAGTTAGCCTATaGGATATTGGCCTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: KSHFICYIFQSVCPSVLGFKVSL*DIGLSK
Trigger: CTTTGAAAGGCCAATATCCCATAGGCTAACTTTAAA...GCCAAGAACAGAAGGGCAGACAGATTGAAAGATGTAGCAAATAAAGTGACTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp GGATATCACATGTTTTGGACAAATACGAATTATGGAGAGACACATTTACAGCATCATCTAAATAAAGAGTaGCTGGAGGACAGTTCATGT +
Preference number: 4 (lower is better)
Translates to: GYHMFWTNTNYGETHLQHHLNKE*LEDSSC
Trigger: ACATGAACTGTCCTCCAGCCACTCTTTATTTAGATG...ATGCTGTAAATGTGTCTCTCCATAATTCGTATTTGTCCAAAACATGTGATATCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp AAAAGTCACTTTATTTGCTACATCTTTCAATCTGTCTGCCCTTCTGTTCTTGGCATACCATATATCTTCTaGTCCGAAGGTAACTGTAAA +
Preference number: 4 (lower is better)
Translates to: KSHFICYIFQSVCPSVLGIPYIF*SEGNCK
Trigger: TTTACAGTTACCTTCGGACCAGAAGATATATGGTAT...GCCAAGAACAGAAGGGCAGACAGATTGAAAGATGTAGCAAATAAAGTGACTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp GGATATCACATGTTTTGGACAAATACGAATTATGGAGAGACACATTTACAGCATAATGTTCTTCCTTGCTaGACAACTAAAGTAGATGTG +
Preference number: 4 (lower is better)
Translates to: GYHMFWTNTNYGETHLQHNVLPC*TTKVDV
Trigger: CACATCTACTTTAGTTGTGCAGCAAGGAAGAACATT...ATGCTGTAAATGTGTCTCTCCATAATTCGTATTTGTCCAAAACATGTGATATCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR GCA 90 bp GGATATCACATGTTTTGGACAAATACGAATTATGGAGAGACACATTTACAGCATTGTTTTCTAAAGTCCTaGTGCATCTTTGTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: GYHMFWTNTNYGETHLQHCFLKS*CIFVLH
Trigger: ATGCAGAACAAAGATGCAGCAGGACTTTAGAAAACA...ATGCTGTAAATGTGTCTCTCCATAATTCGTATTTGTCCAAAACATGTGATATCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp TATCTGCTTAATTTACTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTTTTATAATACCAATATTATaGGCTAATGACTGGGCAAGT +
Preference number: 4 (lower is better)
Translates to: YLLNLLLTLFAQDLGVPFIIPIL*ANDWAS
Trigger: ACTTGCCCAGTCATTAGCCCATAATATTGGTATTAT...AAAAGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATTAAGCAGATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398201.8
3UTR CAA 72 bp AGATACTTCTTGAAACTCTCCCTTGAGACTATAAATTaGTCAATGAATCCCACAAATGGCTCTAAGAATGTT +
Preference number: 4 (lower is better)
Translates to: RYFLKLSLETIN*SMNPTNGSKNV
Trigger: AACATTCTTAGAGCCATTTGTGGGATTCATTGACAAATTTATAGTCTCAAGGGAGAGTTTCAAGAAGTATCT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CCA 90 bp TCTGAGACAGACACAAAATCACTTCTCTGGTATTTCTGCCAAAAATACATATCTTTGCTGAAATTCAGATaGAAGATCATCCAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: SETDTKSLLWYFCQKYISLLKFR*KIIQGK
Trigger: TTTTCCTTGGATGATCTTCCATCTGAATTTCAGCAA...AGATATGTATTTTTGGCAGAAATACCAGAGAAGTGATTTTGTGTCTGTCTCAGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439864.5
CDS GCA 90 bp TGGTGCTGCCGTCAGCCCGCCTCGCCCGAGACGCTCAGCTCCTCATaGCGGCGCCGCCGAGTCCGTTTCCCTCGCTCCGCGCCCCCGGGG +
Preference number: 5 (lower is better)
Translates to: WCCRQPASPETLSSS*RRRRVRFPRSAPPG
Trigger: CCCCGGGGGCGCGGAGCGAGGGAAACGGACTCGGCGGCGCCGGCATGAGGAGCTGAGCGTCTCGGGCGAGGCGGGCTGACGGCAGCACCA
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000398201.8
ENST00000398204.8
ENST00000412441.5
ENST00000413139.2
ENST00000439864.5
ENST00000683525.1
CDS GCA 90 bp GCCACCTCCACCCAGCCCCGGCCGGTGCTGCGGCGGCCGTGGCGCTaGAACCTCCACCGCGGCTCAGTGCTGCATTGTGCTTCGCGGACG +
Preference number: 5 (lower is better)
Translates to: ATSTQPRPVLRRPWR*NLHRGSVLHCASRT
Trigger: CGTCCGCGAAGCACAATGCAGCACTGAGCCGCGGTGGAGGTTGCAGCGCCACGGCCGCCGCAGCACCGGCCGGGGCTGGGTGGAGGTGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398204.8
ENST00000413139.2
ENST00000439864.5
CDS GCA 90 bp GCAGCAAGAAGGGCACGGACACAGCCACTGCCGCCTGCATGGTGCTaGCGTCAGCCCGCCTCGCCCGAGACGCTCAGCTCCTCATGCCGG +
Preference number: 5 (lower is better)
Translates to: AARRARTQPLPPAWC*RQPASPETLSSSCR
Trigger: CCGGCATGAGGAGCTGAGCGTCTCGGGCGAGGCGGGCTGACGGCAGCACCATGCAGGCGGCAGTGGCTGTGTCCGTGCCCTTCTTGCTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265727.11
ENST00000398201.8
ENST00000398204.8
ENST00000412441.5
ENST00000413139.2
ENST00000439864.5
ENST00000683525.1
CDS GCA 90 bp GGTCCCCAGGACACAGAGCAGCAAGAAGGGCACGGACACAGCCACTaGCGCCTGCATGGTGCTGCCGTCAGCCCGCCTCGCCCGAGACGC +
Preference number: 5 (lower is better)
Translates to: GPQDTEQQEGHGHSH*RLHGAAVSPPRPRR
Trigger: GCGTCTCGGGCGAGGCGGGCTGACGGCAGCACCATGCAGGCGGCAGTGGCTGTGTCCGTGCCCTTCTTGCTGCTCTGTGTCCTGGGGACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000265727.11
ENST00000398201.8
ENST00000398204.8
ENST00000398209.7
ENST00000412441.5
ENST00000413139.2
ENST00000439864.5
ENST00000683525.1
CDS GCA 90 bp AGAGCAGCAAGAAGGGCACGGACACAGCCACTGCCGCCTGCATGGTaGTGCCGTCAGCCCGCCTCGCCCGAGACGCTCAGCTCCTCATGC +
Preference number: 5 (lower is better)
Translates to: RAARRARTQPLPPAW*CRQPASPETLSSSC
Trigger: GCATGAGGAGCTGAGCGTCTCGGGCGAGGCGGGCTGACGGCAGCACCATGCAGGCGGCAGTGGCTGTGTCCGTGCCCTTCTTGCTGCTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265727.11
ENST00000398201.8
ENST00000398204.8
ENST00000412441.5
ENST00000413139.2
ENST00000439864.5
ENST00000683525.1
CDS GCA 90 bp AGGACACAGAGCAGCAAGAAGGGCACGGACACAGCCACTGCCGCCTaGATGGTGCTGCCGTCAGCCCGCCTCGCCCGAGACGCTCAGCTC +
Preference number: 5 (lower is better)
Translates to: RTQSSKKGTDTATAA*MVLPSARLARDAQL
Trigger: GAGCTGAGCGTCTCGGGCGAGGCGGGCTGACGGCAGCACCATGCAGGCGGCAGTGGCTGTGTCCGTGCCCTTCTTGCTGCTCTGTGTCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265727.11
ENST00000398201.8
ENST00000398204.8
ENST00000398209.7
ENST00000412441.5
ENST00000413139.2
ENST00000439864.5
ENST00000683525.1
CDS CCA 90 bp CACAGAGCAGCAAGAAGGGCACGGACACAGCCACTGCCGCCTGCATaGTGCTGCCGTCAGCCCGCCTCGCCCGAGACGCTCAGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: HRAARRARTQPLPPA*CCRQPASPETLSSS
Trigger: TGAGGAGCTGAGCGTCTCGGGCGAGGCGGGCTGACGGCAGCACCATGCAGGCGGCAGTGGCTGTGTCCGTGCCCTTCTTGCTGCTCTGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265727.11
ENST00000398201.8
ENST00000398204.8
ENST00000398209.7
ENST00000412441.5
ENST00000413139.2
ENST00000439864.5
ENST00000683525.1
CDS CCA 90 bp CCCTGTCTGGGGGCTGTCAGAGCCCCCTGGGCTTATGCCTTGGGATaGGACTGTCTGGGCGAGGGAGTGCCCAGGCTCAGGTGCTTGGGG +
Preference number: 5 (lower is better)
Translates to: PCLGAVRAPWAYALG*DCLGEGVPRLRCLG
Trigger: CCCCAAGCACCTGAGCCTGGGCACTCCCTCGCCCAGACAGTCCCATCCCAAGGCATAAGCCCAGGGGGCTCTGACAGCCCCCAGACAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000426930.5
CDS TCA 90 bp CGAGCGCGTCGTGCCGACTTTCGTCTTCGCCGCCCGAGCGGTAGATaGGGCGCAGTGGCACGATGCTCTGGCGCTCCACGAAGCGGTTTT +
Preference number: 5 (lower is better)
Translates to: RARRADFRLRRPSGR*GAVARCSGAPRSGF
Trigger: AAAACCGCTTCGTGGAGCGCCAGAGCATCGTGCCACTGCGCCTCATCTACCGCTCGGGCGGCGAAGACGAAAGTCGGCACGACGCGCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000265727.11
ENST00000398201.8
ENST00000398203.8
ENST00000398204.8
ENST00000398209.7
ENST00000412441.5
ENST00000413139.2
ENST00000439864.5
ENST00000683525.1
ENST00000684002.1
CDS GCA 90 bp GATCCAGACTCCCTGTCTGGGGGCTGTCAGAGCCCCCTGGGCTTATaGCTTGGGATGGGACTGTCTGGGCGAGGGAGTGCCCAGGCTCAG +
Preference number: 5 (lower is better)
Translates to: DPDSLSGGCQSPLGL*LGMGLSGRGSAQAQ
Trigger: CTGAGCCTGGGCACTCCCTCGCCCAGACAGTCCCATCCCAAGGCATAAGCCCAGGGGGCTCTGACAGCCCCCAGACAGGGAGTCTGGATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000426930.5
CDS CCA 90 bp AGACTCCCTGTCTGGGGGCTGTCAGAGCCCCCTGGGCTTATGCCTTaGGATGGGACTGTCTGGGCGAGGGAGTGCCCAGGCTCAGGTGCT +
Preference number: 5 (lower is better)
Translates to: RLPVWGLSEPPGLMP*DGTVWARECPGSGA
Trigger: AGCACCTGAGCCTGGGCACTCCCTCGCCCAGACAGTCCCATCCCAAGGCATAAGCCCAGGGGGCTCTGACAGCCCCCAGACAGGGAGTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000426930.5
CDS CCA 90 bp GGGGGAGCGAGCGAGTGCTGCATTGGGCGGTTGGCTGTAGCTAAGTaGTTTCTAGCGCCTCCCACCTCATCCCCTGGCAAAGGCTCGGGC +
Preference number: 5 (lower is better)
Translates to: GGASECCIGRLAVAK*FLAPPTSSPGKGSG
Trigger: GCCCGAGCCTTTGCCAGGGGATGAGGTGGGAGGCGCTAGAAACCACTTAGCTACAGCCAACCGCCCAATGCAGCACTCGCTCGCTCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398204.8
CDS CCA 90 bp CGGAACCCAACTGGGAAGGACGCAGAGACACCAGCCCGAGAGCCTTaGACCAGCTCATCCGAGAGCAACCAGGAGCGGGGCCCAGAAGCA +
Preference number: 5 (lower is better)
Translates to: RNPTGKDAETPAREP*TSSSESNQERGPEA
Trigger: TGCTTCTGGGCCCCGCTCCTGGTTGCTCTCGGATGAGCTGGTCCAAGGCTCTCGGGCTGGTGTCTCTGCGTCCTTCCCAGTTGGGTTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398203.8
CDS CCA 90 bp ATACCTGTGATCCAGACTCCCTGTCTGGGGGCTGTCAGAGCCCCCTaGGCTTATGCCTTGGGATGGGACTGTCTGGGCGAGGGAGTGCCC +
Preference number: 5 (lower is better)
Translates to: IPVIQTPCLGAVRAP*AYALGWDCLGEGVP
Trigger: GGGCACTCCCTCGCCCAGACAGTCCCATCCCAAGGCATAAGCCCAGGGGGCTCTGACAGCCCCCAGACAGGGAGTCTGGATCACAGGTAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000426930.5
CDS CCA 90 bp GTGCCGACTTTCGTCTTCGCCGCCCGAGCGGTAGATGAGGCGCAGTaGCACGATGCTCTGGCGCTCCACGAAGCGGTTTTCCTTCCTCTT +
Preference number: 5 (lower is better)
Translates to: VPTFVFAARAVDEAQ*HDALALHEAVFLPL
Trigger: AAGAGGAAGGAAAACCGCTTCGTGGAGCGCCAGAGCATCGTGCCACTGCGCCTCATCTACCGCTCGGGCGGCGAAGACGAAAGTCGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000265727.11
ENST00000398201.8
ENST00000398203.8
ENST00000398204.8
ENST00000398209.7
ENST00000412441.5
ENST00000413139.2
ENST00000439864.5
ENST00000683525.1
ENST00000684002.1
CDS-3UTR CAA 90 bp CTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGTCTGAAGAGCAGATAGATCCCTGGGCTTATGCCTaGGGATGGGACTGTCTGGGC +
Preference number: 5 (lower is better)
Translates to: LSSVASQRVFVLSEEQIDPWAYA*GWDCLG
Trigger: GCCCAGACAGTCCCATCCCAAGGCATAAGCCCAGGG...ATCTATCTGCTCTTCAGACAATACGAAGACCCTCTGAGATGCTACAGAGGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426930.5
CDS GCA 90 bp GGGTCTCAAGCTGGAGTCAACATGAAAGTATGTTCCAGTTGGCTCTaGAAGGAGCAGATAGGGTCCCACTCTTCTGATCCTGGAGCCTCA +
Preference number: 5 (lower is better)
Translates to: GSQAGVNMKVCSSWL*KEQIGSHSSDPGAS
Trigger: TGAGGCTCCAGGATCAGAAGAGTGGGACCCTATCTGCTCCTTGCAGAGCCAACTGGAACATACTTTCATGTTGACTCCAGCTTGAGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476330.1
CDS-3UTR CAA 90 bp GTAACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTGCCTCCCAGGTTACCTaGCCAAGAGTTACTTCGAGG +
Preference number: 5 (lower is better)
Translates to: VTRCETPLPLLCSISEGLASQVT*PRVTSR
Trigger: CCTCGAAGTAACTCTTGGCAAGGTAACCTGGGAGGC...AAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398204.8
ENST00000398209.7
ENST00000426930.5
CDS-3UTR CAA 90 bp GGCTCCTGCATCAGCAAACTGTGGAGGCCAGAAGTTTTGCTGGGCATTTTGTTCTGCTGCATTGGGCGGTaGGCTGTAGCTAAGTGGTTT +
Preference number: 5 (lower is better)
Translates to: GSCISKLWRPEVLLGILFCCIGR*AVAKWF
Trigger: AAACCACTTAGCTACAGCCAACCGCCCAATGCAGCA...GAACAAAATGCCCAGCAAAACTTCTGGCCTCCACAGTTTGCTGATGCAGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398204.8
CDS-3UTR CAA 90 bp GATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGTTTGGGGGTGCTAGTTaGGAGGGGCAAGTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: DVKLRFLSSVASQRVFVLFGGAS*EGQVFQ
Trigger: CTGGAAGACTTGCCCCTCCAAACTAGCACCCCCAAA...CAATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp GTAACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTTTTGGGGGTGCTAGTTaGGAGGGGCAAGTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: VTRCETPLPLLCSISEGLFGGAS*EGQVFQ
Trigger: CTGGAAGACTTGCCCCTCCAAACTAGCACCCCCAAA...AAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGTTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp CCATGTGGGCATCCAGTGGCAGCAGCCAGATGTGTCCTATCAGACTGTGCAGGCTGCTCAGGAAAGCAGTaGCCATATACATTTCCATTG +
Preference number: 5 (lower is better)
Translates to: PCGHPVAAARCVLSDCAGCSGKQ*PYTFPL
Trigger: CAATGGAAATGTATATGGCAACTGCTTTCCTGAGCA...GCCTGCACAGTCTGATAGGACACATCTGGCTGCTGCCACTGGATGCCCACATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp CCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTTGGAGATATGGCAAACTTGTaGTCAGTCGCCCAGGTTTCC +
Preference number: 5 (lower is better)
Translates to: PAASLFCIRRCGRKAPLGDMANL*SVAQVS
Trigger: GGAAACCTGGGCGACTGACAACAAGTTTGCCATATC...TCCAAGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp GTAACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTGTGCCAGCAACACCATaGCCAGACAGAGTGATACCA +
Preference number: 5 (lower is better)
Translates to: VTRCETPLPLLCSISEGLVPATP*PDRVIP
Trigger: TGGTATCACTCTGTCTGGCAATGGTGTTGCTGGCAC...AAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398204.8
ENST00000398209.7
ENST00000426930.5
CDS-3UTR CAA 90 bp GAAAGCCCTCACCATGTTGCACTGTCCGATGTATTCCTTTCCACAGATTGCATGGCCTCCCAGGTTACCTaGCCAAGAGTTACTTCGAGG +
Preference number: 5 (lower is better)
Translates to: ESPHHVALSDVFLSTDCMASQVT*PRVTSR
Trigger: CCTCGAAGTAACTCTTGGCAAGGTAACCTGGGAGGC...CATGCAATCTGTGGAAAGGAATACATCGGACAGTGCAACATGGTGAGGGCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp ACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTCCTTCTGTTCTTGGCTaGAGCTATGTGGCAACACTG +
Preference number: 5 (lower is better)
Translates to: TRCETPLPLLCSISEGLRPSVLG*SYVATL
Trigger: CAGTGTTGCCACATAGCTCAAGCCAAGAACAGAAGG...ACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp ACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTAAAGCCCTCACCATGTaGCACTGTCCGATGTATTCC +
Preference number: 5 (lower is better)
Translates to: TRCETPLPLLCSISEGLRKALTM*HCPMYS
Trigger: GGAATACATCGGACAGTGCAACATGGTGAGGGCTTT...ACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp CCATGTGGGCATCCAGTGGCAGCAGCCAGATGTGTCCTATCAGACTGTGCAGGCGGTGTTGAGTCATTTTaGCCCTTTAAAAAGACTGGT +
Preference number: 5 (lower is better)
Translates to: PCGHPVAAARCVLSDCAGGVESF*PFKKTG
Trigger: ACCAGTCTTTTTAAAGGGCAAAAATGACTCAACACC...GCCTGCACAGTCTGATAGGACACATCTGGCTGCTGCCACTGGATGCCCACATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS TCA 90 bp GTCAACATGAGTCAACTGTATCTGGTATATGGTCTTCTGGGATTCTaGCTTCAAAAACATCTGAATCTGCGGGCCACCGAGGTCGCCCCG +
Preference number: 5 (lower is better)
Translates to: VNMSQLYLVYGLLGF*LQKHLNLRATEVAP
Trigger: CGGGGCGACCTCGGTGGCCCGCAGATTCAGATGTTTTTGAAGTCAGAATCCCAGAAGACCATATACCAGATACAGTTGACTCATGTTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412441.5
CDS-3UTR CAA 90 bp ACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTTCAGATATGGCAAACTaGTTGTCAGTCGCCCAGGTT +
Preference number: 5 (lower is better)
Translates to: TRCETPLPLLCSISEGLRSDMAN*LSVAQV
Trigger: AACCTGGGCGACTGACAACAAGTTTGCCATATCTGA...ACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp AACTTCAGGCCACAAAGGGTTAGAGTATTGGCAAACCAGAAGCTACCAGCTCACGTGCCAGCAACACCATaGCCAGACAGAGTGATACCA +
Preference number: 5 (lower is better)
Translates to: NFRPQRVRVLANQKLPAHVPATP*PDRVIP
Trigger: TGGTATCACTCTGTCTGGCAATGGTGTTGCTGGCAC...GTGAGCTGGTAGCTTCTGGTTTGCCAATACTCTAACCCTTTGTGGCCTGAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp GTAACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCAGGAAGTGGAGGCATaGGGTAAGGGTATTTTCTGC +
Preference number: 5 (lower is better)
Translates to: VTRCETPLPLLCSISEGLQEVEA*GKGIFC
Trigger: GCAGAAAATACCCTTACCCAATGCCTCCACTTCCTG...AAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398204.8
ENST00000398209.7
ENST00000426930.5
CDS-3UTR CAA 90 bp ACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTTGTCGGTTCACTTTCTaGTCCTCATCAGGAAGTGGA +
Preference number: 5 (lower is better)
Translates to: TRCETPLPLLCSISEGLRCRFTF*SSSGSG
Trigger: TCCACTTCCTGATGAGGACAAGAAAGTGAACCGACA...ACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398204.8
ENST00000398209.7
ENST00000426930.5
CDS-3UTR CAA 90 bp GGCTCCTGCATCAGCAAACTGTGGAGGCCAGAAGTTTTGCTGGGCATTTTGTTCGAATCTTCCGTCATCTaGCTTCAGAGTCAGTGCAGA +
Preference number: 5 (lower is better)
Translates to: GSCISKLWRPEVLLGILFESSVI*LQSQCR
Trigger: TCTGCACTGACTCTGAAGCAAGATGACGGAAGATTC...GAACAAAATGCCCAGCAAAACTTCTGGCCTCCACAGTTTGCTGATGCAGGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp GATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGAGTCCTGCTGCATCTTaGTTCTGCATCCGCAGATGT +
Preference number: 5 (lower is better)
Translates to: DVKLRFLSSVASQRVFVLSPAAS*FCIRRC
Trigger: ACATCTGCGGATGCAGAACAAAGATGCAGCAGGACT...CAATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS CCA 90 bp TATAGAGGGTCTCAAGCTGGAGTCAACATGAAAGTATGTTCCAGTTaGCTCTGCAAGGAGCAGATAGGGTCCCACTCTTCTGATCCTGGA +
Preference number: 5 (lower is better)
Translates to: YRGSQAGVNMKVCSS*LCKEQIGSHSSDPG
Trigger: TCCAGGATCAGAAGAGTGGGACCCTATCTGCTCCTTGCAGAGCCAACTGGAACATACTTTCATGTTGACTCCAGCTTGAGACCCTCTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476330.1
CDS-3UTR CAA 90 bp AGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGATATGGCAAACTTGTaGTCAGTCGCCCAGGTTTCC +
Preference number: 5 (lower is better)
Translates to: RCETPLPLLCSISEGLRIDMANL*SVAQVS
Trigger: GGAAACCTGGGCGACTGACAACAAGTTTGCCATATC...AATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp TCAATCTGTCTGCCCTTCTGTTCTTGGCTTGAGCTATGTGGCAACACTGCCCAAAGCTTAGAAGGTTTGTaGAAAAGGCAGGCACCACCT +
Preference number: 5 (lower is better)
Translates to: SICLPFCSWLELCGNTAQSLEGL*KRQAPP
Trigger: AGGTGGTGCCTGCCTTTTCAACAAACCTTCTAAGCT...TTGGGCAGTGTTGCCACATAGCTCAAGCCAAGAACAGAAGGGCAGACAGATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp TTTCAAAGCATCAGATTCTTTCCCCCACCAGCTGTTAGTGTAACTTCGCAGATGGCCTCCCAGGTTACCTaGCCAAGAGTTACTTCGAGG +
Preference number: 5 (lower is better)
Translates to: FQSIRFFPPPAVSVTSQMASQVT*PRVTSR
Trigger: CCTCGAAGTAACTCTTGGCAAGGTAACCTGGGAGGC...CATCTGCGAAGTTACACTAACAGCTGGTGGGGGAAAGAATCTGATGCTTTGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp AACTTCAGGCCACAAAGGGTTAGAGTATTGGCAAACCAGAAGCTACCAGCTCACCAGGAAGTGGAGGCATaGGGTAAGGGTATTTTCTGC +
Preference number: 5 (lower is better)
Translates to: NFRPQRVRVLANQKLPAHQEVEA*GKGIFC
Trigger: GCAGAAAATACCCTTACCCAATGCCTCCACTTCCTG...GTGAGCTGGTAGCTTCTGGTTTGCCAATACTCTAACCCTTTGTGGCCTGAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp GATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGTGGAGGCCAGAAGTTTaGCTGGGCATTTTGTTCTCT +
Preference number: 5 (lower is better)
Translates to: DVKLRFLSSVASQRVFVLWRPEV*LGILFS
Trigger: AGAGAACAAAATGCCCAGCAAAACTTCTGGCCTCCA...CAATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp AGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTCTCACTGGCAGTACGTaGTCTCATGTGTCTTTGGTG +
Preference number: 5 (lower is better)
Translates to: RCETPLPLLCSISEGLRILTGST*SHVSLV
Trigger: CACCAAAGACACATGAGACAACGTACTGCCAGTGAG...AATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp GTAACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTTCAGTGCAGAATGACTaGTTGGGATTCACATCCCAG +
Preference number: 5 (lower is better)
Translates to: VTRCETPLPLLCSISEGLSVQND*LGFTSQ
Trigger: CTGGGATGTGAATCCCAACAAGTCATTCTGCACTGA...AAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp GGCTCCTGCATCAGCAAACTGTGGAGGCCAGAAGTTTTGCTGGGCATTTTGTTCACTCGGCCCTTCAGTTaGGGCATGATATGTAATCAA +
Preference number: 5 (lower is better)
Translates to: GSCISKLWRPEVLLGILFTRPFS*GMICNQ
Trigger: TTGATTACATATCATGCCCAAACTGAAGGGCCGAGT...GAACAAAATGCCCAGCAAAACTTCTGGCCTCCACAGTTTGCTGATGCAGGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp TCAATCTGTCTGCCCTTCTGTTCTTGGCTTGAGCTATGTGGCAACACTGCCCAAGGAGAAAAGCTCCTCTaGGAATTAAAAGCACCTCCC +
Preference number: 5 (lower is better)
Translates to: SICLPFCSWLELCGNTAQGEKLL*ELKAPP
Trigger: GGGAGGTGCTTTTAATTCCAAGAGGAGCTTTTCTCC...TTGGGCAGTGTTGCCACATAGCTCAAGCCAAGAACAGAAGGGCAGACAGATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp GTAACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTGGAGAAAAGCTCCTCTaGGAATTAAAAGCACCTCCC +
Preference number: 5 (lower is better)
Translates to: VTRCETPLPLLCSISEGLGEKLL*ELKAPP
Trigger: GGGAGGTGCTTTTAATTCCAAGAGGAGCTTTTCTCC...AAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp AGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTAGTCCTGCTGCATCTTaGTTCTGCATCCGCAGATGT +
Preference number: 5 (lower is better)
Translates to: RCETPLPLLCSISEGLRISPAAS*FCIRRC
Trigger: ACATCTGCGGATGCAGAACAAAGATGCAGCAGGACT...AATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS TCA 90 bp TCCCCGATGCTTACAAGGCTGTGTGAGTATTGGGGAGAGGAAGGGTaGCCCTTTGAAATGGTTGAATCCCAGATGATGAGAAGAAAGGAA +
Preference number: 5 (lower is better)
Translates to: SPMLTRLCEYWGEEG*PFEMVESQMMRRKE
Trigger: TTCCTTTCTTCTCATCATCTGGGATTCAACCATTTCAAAGGGTCACCCTTCCTCTCCCCAATACTCACACAGCCTTGTAAGCATCGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684002.1
CDS-3UTR CAA 90 bp GAAAGCCCTCACCATGTTGCACTGTCCGATGTATTCCTTTCCACAGATTGCATGTCAGATATGGCAAACTaGTTGTCAGTCGCCCAGGTT +
Preference number: 5 (lower is better)
Translates to: ESPHHVALSDVFLSTDCMSDMAN*LSVAQV
Trigger: AACCTGGGCGACTGACAACAAGTTTGCCATATCTGA...CATGCAATCTGTGGAAAGGAATACATCGGACAGTGCAACATGGTGAGGGCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp GATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGAGAAGCTTAGAAGGTTaGTTGAAAAGGCAGGCACCA +
Preference number: 5 (lower is better)
Translates to: DVKLRFLSSVASQRVFVLRSLEG*LKRQAP
Trigger: TGGTGCCTGCCTTTTCAACAAACCTTCTAAGCTTCT...CAATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp GGCTCCTGCATCAGCAAACTGTGGAGGCCAGAAGTTTTGCTGGGCATTTTGTTCTGTCTATCTCTGGTTTaGCATCTTCCTCCAAAGCAA +
Preference number: 5 (lower is better)
Translates to: GSCISKLWRPEVLLGILFCLSLV*HLPPKQ
Trigger: TTGCTTTGGAGGAAGATGCAAAACCAGAGATAGACA...GAACAAAATGCCCAGCAAAACTTCTGGCCTCCACAGTTTGCTGATGCAGGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp GGCAGTACGTTGTCTCATGTGTCTTTGGTGCACTTGCTTAATCTCAGCAGCACAAGCACATCCCGTTTGTaGCACTGTATCCATGTGTCT +
Preference number: 5 (lower is better)
Translates to: GSTLSHVSLVHLLNLSSTSTSRL*HCIHVS
Trigger: AGACACATGGATACAGTGCAACAAACGGGATGTGCT...TGTGCTGCTGAGATTAAGCAAGTGCACCAAAGACACATGAGACAACGTACTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp GAAAGCCCTCACCATGTTGCACTGTCCGATGTATTCCTTTCCACAGATTGCATGCAAAGCACATCCCGTTaGTTGCACTGTATCCATGTG +
Preference number: 5 (lower is better)
Translates to: ESPHHVALSDVFLSTDCMQSTSR*LHCIHV
Trigger: CACATGGATACAGTGCAACAAACGGGATGTGCTTTG...CATGCAATCTGTGGAAAGGAATACATCGGACAGTGCAACATGGTGAGGGCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp ACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATGCCTATTATGATATaGGTGCCAGCAACACCATTG +
Preference number: 5 (lower is better)
Translates to: TRCETPLPLLCSISEGLRMPIMI*VPATPL
Trigger: CAATGGTGTTGCTGGCACCAATATCATAATAGGCAT...ACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398204.8
ENST00000398209.7
ENST00000426930.5
CDS-3UTR CAA 90 bp GTAACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCCTCTGATTTTCTTTTaGTTGCCTCCCAGGTTACCT +
Preference number: 5 (lower is better)
Translates to: VTRCETPLPLLCSISEGLPLIFF*LPPRLP
Trigger: AGGTAACCTGGGAGGCAACAAAAAGAAAATCAGAGG...AAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398204.8
ENST00000398209.7
ENST00000426930.5
CDS-3UTR CAA 90 bp GAAAGCCCTCACCATGTTGCACTGTCCGATGTATTCCTTTCCACAGATTGCATGTGTCGGTTCACTTTCTaGTCCTCATCAGGAAGTGGA +
Preference number: 5 (lower is better)
Translates to: ESPHHVALSDVFLSTDCMCRFTF*SSSGSG
Trigger: TCCACTTCCTGATGAGGACAAGAAAGTGAACCGACA...CATGCAATCTGTGGAAAGGAATACATCGGACAGTGCAACATGGTGAGGGCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp TTGTGTTACTTGTTCAACTTAGCACCGCTATATTTAAAGATTGGGGCTATTTGCCGGCTCAGTGCTGCATaGTGCTTCGCGGACGCTTCC +
Preference number: 5 (lower is better)
Translates to: LCYLFNLAPLYLKIGAICRLSAA*CFADAS
Trigger: GGAAGCGTCCGCGAAGCACAATGCAGCACTGAGCCG...GCAAATAGCCCCAATCTTTAAATATAGCGGTGCTAAGTTGAACAAGTAACACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398204.8
CDS-3UTR CAA 90 bp ACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTACCCTTTATGAATGGTaGAAGCTGCTCAACTCAAAC +
Preference number: 5 (lower is better)
Translates to: TRCETPLPLLCSISEGLRTLYEW*KLLNSN
Trigger: GTTTGAGTTGAGCAGCTTCAACCATTCATAAAGGGT...ACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp AAGTCCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTGAAGCTCCGGGTGTCTaGTTAAAAATACAGCAACCA +
Preference number: 5 (lower is better)
Translates to: KSCCIFVLHPQMWEKSSSEAPGV*LKIQQP
Trigger: TGGTTGCTGTATTTTTAACAAGACACCCGGAGCTTC...AGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGGACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp CTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGTCTGAAGAGCAGATAGATCTGCCAGTTCCTAACTaGGCTCTCCCCTTCCATATA +
Preference number: 5 (lower is better)
Translates to: LSSVASQRVFVLSEEQIDLPVPN*ALPFHI
Trigger: TATATGGAAGGGGAGAGCCAAGTTAGGAACTGGCAG...ATCTATCTGCTCTTCAGACAATACGAAGACCCTCTGAGATGCTACAGAGGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp GATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGTGGAATGATGATTACTaGATGAAAAGCCTGCCAGCC +
Preference number: 5 (lower is better)
Translates to: DVKLRFLSSVASQRVFVLWNDDY*MKSLPA
Trigger: GGCTGGCAGGCTTTTCATCAAGTAATCATCATTCCA...CAATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS GCA 90 bp TTTTACAGCAAAGACCGTCACTGCATTGAGAGTCTTGAGTCAAGGTaGATTTCTTACAACACTCTGCTCCTTCAAGGACACATTCGGCCG +
Preference number: 5 (lower is better)
Translates to: FYSKDRHCIESLESR*ISYNTLLLQGHIRP
Trigger: CGGCCGAATGTGTCCTTGAAGGAGCAGAGTGTTGTAAGAAATGCACCTTGACTCAAGACTCTCAATGCAGTGACGGTCTTTGCTGTAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000265727.11
ENST00000398201.8
ENST00000398203.8
ENST00000398204.8
ENST00000398209.7
ENST00000413139.2
ENST00000682337.1
ENST00000683525.1
ENST00000684002.1
CDS-3UTR CAA 90 bp AAGTCCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTTTAACTTCCACAGTCTaGCCTCCATGTTCAATGTGT +
Preference number: 5 (lower is better)
Translates to: KSCCIFVLHPQMWEKSSSLTSTV*PPCSMC
Trigger: ACACATTGAACATGGAGGCAAGACTGTGGAAGTTAA...AGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp GAAAGCCCTCACCATGTTGCACTGTCCGATGTATTCCTTTCCACAGATTGCATGAGAAGCTTAGAAGGTTaGTTGAAAAGGCAGGCACCA +
Preference number: 5 (lower is better)
Translates to: ESPHHVALSDVFLSTDCMRSLEG*LKRQAP
Trigger: TGGTGCCTGCCTTTTCAACAAACCTTCTAAGCTTCT...CATGCAATCTGTGGAAAGGAATACATCGGACAGTGCAACATGGTGAGGGCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp GATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGTGTCTATCTCTGGTTTaGCATCTTCCTCCAAAGCAA +
Preference number: 5 (lower is better)
Translates to: DVKLRFLSSVASQRVFVLCLSLV*HLPPKQ
Trigger: TTGCTTTGGAGGAAGATGCAAAACCAGAGATAGACA...CAATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp GTAACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCCAAGCCTTGGGATATaGCCAATATTGGTACACAAA +
Preference number: 5 (lower is better)
Translates to: VTRCETPLPLLCSISEGLPSLGI*PILVHK
Trigger: TTTGTGTACCAATATTGGCAATATCCCAAGGCTTGG...AAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp CTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTTTTTCCATTAGAGGTTCAGTGCCAGCAACACCATaGCCAGACAGAGTGATACCA +
Preference number: 5 (lower is better)
Translates to: LLTLFAQDLGVPFSIRGSVPATP*PDRVIP
Trigger: TGGTATCACTCTGTCTGGCAATGGTGTTGCTGGCAC...TGAACCTCTAATGGAAAAAGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR CAA 90 bp AAGTCCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTATGCCTATTATGATATaGGTGCCAGCAACACCATTG +
Preference number: 5 (lower is better)
Translates to: KSCCIFVLHPQMWEKSSSMPIMI*VPATPL
Trigger: CAATGGTGTTGCTGGCACCAATATCATAATAGGCAT...AGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp AGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTCCTCTGATTTTCTTTTaGTTGCCTCCCAGGTTACCT +
Preference number: 5 (lower is better)
Translates to: RCETPLPLLCSISEGLRIPLIFF*LPPRLP
Trigger: AGGTAACCTGGGAGGCAACAAAAAGAAAATCAGAGG...AATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398204.8
ENST00000398209.7
ENST00000426930.5
CDS-3UTR CAA 90 bp AGCAATCTATACTTGAAAACTTTTTCCAAATCTATCTGCCATCTGCCATGTCAACGGCTCAGTGCTGCATaGTGCTTCGCGGACGCTTCC +
Preference number: 5 (lower is better)
Translates to: SNLYLKTFSKSICHLPCQRLSAA*CFADAS
Trigger: GGAAGCGTCCGCGAAGCACAATGCAGCACTGAGCCG...TTGACATGGCAGATGGCAGATAGATTTGGAAAAAGTTTTCAAGTATAGATTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439864.5
CDS-3UTR CAA 90 bp GAAAGCCCTCACCATGTTGCACTGTCCGATGTATTCCTTTCCACAGATTGCATGCAGAGGGTCTTCGTATaGTCTGAAGAGCAGATAGAT +
Preference number: 5 (lower is better)
Translates to: ESPHHVALSDVFLSTDCMQRVFV*SEEQID
Trigger: ATCTATCTGCTCTTCAGACAATACGAAGACCCTCTG...CATGCAATCTGTGGAAAGGAATACATCGGACAGTGCAACATGGTGAGGGCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp AGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTCAGAGGGTCTTCGTATaGTCTGAAGAGCAGATAGAT +
Preference number: 5 (lower is better)
Translates to: RCETPLPLLCSISEGLRIQRVFV*SEEQID
Trigger: ATCTATCTGCTCTTCAGACAATACGAAGACCCTCTG...AATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398204.8
ENST00000398209.7
ENST00000426930.5
CDS-3UTR CAA 90 bp CTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGTCTGAAGAGCAGATAGATTCAGTGCAGAATGACTaGTTGGGATTCACATCCCAG +
Preference number: 5 (lower is better)
Translates to: LSSVASQRVFVLSEEQIDSVQND*LGFTSQ
Trigger: CTGGGATGTGAATCCCAACAAGTCATTCTGCACTGA...ATCTATCTGCTCTTCAGACAATACGAAGACCCTCTGAGATGCTACAGAGGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp GGCAGTACGTTGTCTCATGTGTCTTTGGTGCACTTGCTTAATCTCAGCAGCACAACTCGGCCCTTCAGTTaGGGCATGATATGTAATCAA +
Preference number: 5 (lower is better)
Translates to: GSTLSHVSLVHLLNLSSTTRPFS*GMICNQ
Trigger: TTGATTACATATCATGCCCAAACTGAAGGGCCGAGT...TGTGCTGCTGAGATTAAGCAAGTGCACCAAAGACACATGAGACAACGTACTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp CTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGTCTGAAGAGCAGATAGATAGCAACCACAGCAAATaGAAAGCCCTCACCATGTTG +
Preference number: 5 (lower is better)
Translates to: LSSVASQRVFVLSEEQIDSNHSK*KALTML
Trigger: CAACATGGTGAGGGCTTTCAATTTGCTGTGGTTGCT...ATCTATCTGCTCTTCAGACAATACGAAGACCCTCTGAGATGCTACAGAGGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp GGCAGTACGTTGTCTCATGTGTCTTTGGTGCACTTGCTTAATCTCAGCAGCACAGAAGCTCCGGGTGTCTaGTTAAAAATACAGCAACCA +
Preference number: 5 (lower is better)
Translates to: GSTLSHVSLVHLLNLSSTEAPGV*LKIQQP
Trigger: TGGTTGCTGTATTTTTAACAAGACACCCGGAGCTTC...TGTGCTGCTGAGATTAAGCAAGTGCACCAAAGACACATGAGACAACGTACTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp GGCTCCTGCATCAGCAAACTGTGGAGGCCAGAAGTTTTGCTGGGCATTTTGTTCTCTGTATTGTGTTACTaGTTCAACTTAGCACCGCTA +
Preference number: 5 (lower is better)
Translates to: GSCISKLWRPEVLLGILFSVLCY*FNLAPL
Trigger: TAGCGGTGCTAAGTTGAACAAGTAACACAATACAGA...GAACAAAATGCCCAGCAAAACTTCTGGCCTCCACAGTTTGCTGATGCAGGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp AAGTCCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTCCATATACATTTCCATaGGTGTTTGCCATAACCCCA +
Preference number: 5 (lower is better)
Translates to: KSCCIFVLHPQMWEKSSSPYTFP*VFAITP
Trigger: TGGGGTTATGGCAAACACCAATGGAAATGTATATGG...AGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp AGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGATGAAGAAGGAGACTaGGCAGGAGATAAAGTCCTA +
Preference number: 5 (lower is better)
Translates to: RCETPLPLLCSISEGLRIDEEGD*AGDKVL
Trigger: TAGGACTTTATCTCCTGCCAAGTCTCCTTCTTCATC...AATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398209.7
ENST00000426930.5
CDS-3UTR CAA 90 bp AACTTCAGGCCACAAAGGGTTAGAGTATTGGCAAACCAGAAGCTACCAGCTCACTTAACTTCCACAGTCTaGCCTCCATGTTCAATGTGT +
Preference number: 5 (lower is better)
Translates to: NFRPQRVRVLANQKLPAHLTSTV*PPCSMC
Trigger: ACACATTGAACATGGAGGCAAGACTGTGGAAGTTAA...GTGAGCTGGTAGCTTCTGGTTTGCCAATACTCTAACCCTTTGTGGCCTGAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp GGCTCCTGCATCAGCAAACTGTGGAGGCCAGAAGTTTTGCTGGGCATTTTGTTCTGGAGTAATGTTTACTaGCTGAAATTCAGATGGAAG +
Preference number: 5 (lower is better)
Translates to: GSCISKLWRPEVLLGILFWSNVY*LKFRWK
Trigger: CTTCCATCTGAATTTCAGCAAGTAAACATTACTCCA...GAACAAAATGCCCAGCAAAACTTCTGGCCTCCACAGTTTGCTGATGCAGGAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp TTTCAAAGCATCAGATTCTTTCCCCCACCAGCTGTTAGTGTAACTTCGCAGATGGTTTCAATGAAGCCATaGCCACACTCAGGAGGATCA +
Preference number: 5 (lower is better)
Translates to: FQSIRFFPPPAVSVTSQMVSMKP*PHSGGS
Trigger: TGATCCTCCTGAGTGTGGCAATGGCTTCATTGAAAC...CATCTGCGAAGTTACACTAACAGCTGGTGGGGGAAAGAATCTGATGCTTTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp TTGACACTATTTGCACAGGACCTTGGAGTGCCTTTTTCCATTAGAGGTTCAGACCGAGTTCTCCAAGCCTaGGGATATTGCCAATATTGG +
Preference number: 5 (lower is better)
Translates to: LTLFAQDLGVPFSIRGSDRVLQA*GYCQYW
Trigger: CCAATATTGGCAATATCCCAAGGCTTGGAGAACTCG...GTCTGAACCTCTAATGGAAAAAGGCACTCCAAGGTCCTGTGCAAATAGTGTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR CAA 90 bp TTTCAAAGCATCAGATTCTTTCCCCCACCAGCTGTTAGTGTAACTTCGCAGATGCGAGTTCTCCAAGCCTaGGGATATTGCCAATATTGG +
Preference number: 5 (lower is better)
Translates to: FQSIRFFPPPAVSVTSQMRVLQA*GYCQYW
Trigger: CCAATATTGGCAATATCCCAAGGCTTGGAGAACTCG...CATCTGCGAAGTTACACTAACAGCTGGTGGGGGAAAGAATCTGATGCTTTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp ACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTTTTGGCAAAATACACTaGTGTGTAACAGCTGCATTT +
Preference number: 5 (lower is better)
Translates to: TRCETPLPLLCSISEGLRFGKIH*CVTAAF
Trigger: AAATGCAGCTGTTACACACAAGTGTATTTTGCCAAA...ACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp CCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTTGGATTTGGCAAAATACACTaGTGTGTAACAGCTGCATTT +
Preference number: 5 (lower is better)
Translates to: PAASLFCIRRCGRKAPLGFGKIH*CVTAAF
Trigger: AAATGCAGCTGTTACACACAAGTGTATTTTGCCAAA...TCCAAGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp GGCAGTACGTTGTCTCATGTGTCTTTGGTGCACTTGCTTAATCTCAGCAGCACAGTTTTGCTGGGCATTTaGTTCTCTCACTCAACTACT +
Preference number: 5 (lower is better)
Translates to: GSTLSHVSLVHLLNLSSTVLLGI*FSHSTT
Trigger: AGTAGTTGAGTGAGAGAACAAAATGCCCAGCAAAAC...TGTGCTGCTGAGATTAAGCAAGTGCACCAAAGACACATGAGACAACGTACTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp TTTCAAAGCATCAGATTCTTTCCCCCACCAGCTGTTAGTGTAACTTCGCAGATGTGGAGGCCAGAAGTTTaGCTGGGCATTTTGTTCTCT +
Preference number: 5 (lower is better)
Translates to: FQSIRFFPPPAVSVTSQMWRPEV*LGILFS
Trigger: AGAGAACAAAATGCCCAGCAAAACTTCTGGCCTCCA...CATCTGCGAAGTTACACTAACAGCTGGTGGGGGAAAGAATCTGATGCTTTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp TTTCAAAGCATCAGATTCTTTCCCCCACCAGCTGTTAGTGTAACTTCGCAGATGGTGTCTTTGGTGCACTaGCTTAATCTCAGCAGCACA +
Preference number: 5 (lower is better)
Translates to: FQSIRFFPPPAVSVTSQMVSLVH*LNLSST
Trigger: TGTGCTGCTGAGATTAAGCAAGTGCACCAAAGACAC...CATCTGCGAAGTTACACTAACAGCTGGTGGGGGAAAGAATCTGATGCTTTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp GAACAAAACTTCAGGCCACAAAGGGTTAGAGTATTGGCAAACCAGAAGCTACCAGAATCTTCCGTCATCTaGCTTCAGAGTCAGTGCAGA +
Preference number: 5 (lower is better)
Translates to: EQNFRPQRVRVLANQKLPESSVI*LQSQCR
Trigger: TCTGCACTGACTCTGAAGCAAGATGACGGAAGATTC...TGGTAGCTTCTGGTTTGCCAATACTCTAACCCTTTGTGGCCTGAAGTTTTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp AGGTTATTCCTAATCGAAGCTCCGGGTGTCTTGTTAAAAATACAGCAACCACAGAAAGCCCTCACCATGTaGCACTGTCCGATGTATTCC +
Preference number: 5 (lower is better)
Translates to: RLFLIEAPGVLLKIQQPQKALTM*HCPMYS
Trigger: GGAATACATCGGACAGTGCAACATGGTGAGGGCTTT...CTGTGGTTGCTGTATTTTTAACAAGACACCCGGAGCTTCGATTAGGAATAACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp AAGTCCTGCTGCATCTTTGTTCTGCATCCGCAGATGTGGGAGAAAAGCTCCTCTACATATTGCCTGGTTTaGATTTCAAGGATACGTAGG +
Preference number: 5 (lower is better)
Translates to: KSCCIFVLHPQMWEKSSSTYCLV*ISRIRR
Trigger: CCTACGTATCCTTGAAATCAAAACCAGGCAATATGT...AGAGGAGCTTTTCTCCCACATCTGCGGATGCAGAACAAAGATGCAGCAGGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp GAAAGCCCTCACCATGTTGCACTGTCCGATGTATTCCTTTCCACAGATTGCATGTGCTCAGGAAAGCAGTaGCCATATACATTTCCATTG +
Preference number: 5 (lower is better)
Translates to: ESPHHVALSDVFLSTDCMCSGKQ*PYTFPL
Trigger: CAATGGAAATGTATATGGCAACTGCTTTCCTGAGCA...CATGCAATCTGTGGAAAGGAATACATCGGACAGTGCAACATGGTGAGGGCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp CTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGTCTGAAGAGCAGATAGATGATGAAGAAGGAGACTaGGCAGGAGATAAAGTCCTA +
Preference number: 5 (lower is better)
Translates to: LSSVASQRVFVLSEEQIDDEEGD*AGDKVL
Trigger: TAGGACTTTATCTCCTGCCAAGTCTCCTTCTTCATC...ATCTATCTGCTCTTCAGACAATACGAAGACCCTCTGAGATGCTACAGAGGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398209.7
ENST00000426930.5
CDS GCA 90 bp ATTGGTGCCAGCAACACCATTGCCAGACAGAGTGATACCAGTCTTTaGATCATCATTGTGAGGGAAGTAAGTGTTGCAATCAGAACCTAT +
Preference number: 5 (lower is better)
Translates to: IGASNTIARQSDTSL*IIIVREVSVAIRTY
Trigger: ATAGGTTCTGATTGCAACACTTACTTCCCTCACAATGATGATGCAAAGACTGGTATCACTCTGTCTGGCAATGGTGTTGCTGGCACCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000265727.11
ENST00000398201.8
ENST00000398203.8
ENST00000398204.8
ENST00000398209.7
ENST00000413139.2
ENST00000426930.5
ENST00000682337.1
ENST00000683525.1
ENST00000684002.1
CDS-3UTR CAA 90 bp TTACTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTTTTTCCATTAGAGGTGATATGGCAAACTTGTaGTCAGTCGCCCAGGTTTCC +
Preference number: 5 (lower is better)
Translates to: LLLTLFAQDLGVPFSIRGDMANL*SVAQVS
Trigger: GGAAACCTGGGCGACTGACAACAAGTTTGCCATATC...ACCTCTAATGGAAAAAGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR CAA 90 bp CTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTTTTTCCATTAGAGGTTCAAGCTTAGAAGGTTTGTaGAAAAGGCAGGCACCACCT +
Preference number: 5 (lower is better)
Translates to: LLTLFAQDLGVPFSIRGSSLEGL*KRQAPP
Trigger: AGGTGGTGCCTGCCTTTTCAACAAACCTTCTAAGCT...TGAACCTCTAATGGAAAAAGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR CAA 90 bp AGGTTATTCCTAATCGAAGCTCCGGGTGTCTTGTTAAAAATACAGCAACCACAGAAGACCGTCACTGCATaGAGAGTCTTGAGTCAAGGT +
Preference number: 5 (lower is better)
Translates to: RLFLIEAPGVLLKIQQPQKTVTA*RVLSQG
Trigger: ACCTTGACTCAAGACTCTCAATGCAGTGACGGTCTT...CTGTGGTTGCTGTATTTTTAACAAGACACCCGGAGCTTCGATTAGGAATAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp AGGTTATTCCTAATCGAAGCTCCGGGTGTCTTGTTAAAAATACAGCAACCACAGAGCACATCCCGTTTGTaGCACTGTATCCATGTGTCT +
Preference number: 5 (lower is better)
Translates to: RLFLIEAPGVLLKIQQPQSTSRL*HCIHVS
Trigger: AGACACATGGATACAGTGCAACAAACGGGATGTGCT...CTGTGGTTGCTGTATTTTTAACAAGACACCCGGAGCTTCGATTAGGAATAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp CATGCCAGGAGAAAAGTTGCTGCATCCAAAACCAGAGTAGTCTTATCCATTCAACAAAGCACATCCCGTTaGTTGCACTGTATCCATGTG +
Preference number: 5 (lower is better)
Translates to: HARRKVAASKTRVVLSIQQSTSR*LHCIHV
Trigger: CACATGGATACAGTGCAACAAACGGGATGTGCTTTG...TTGAATGGATAAGACTACTCTGGTTTTGGATGCAGCAACTTTTCTCCTGGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp CTTAATTTACTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTTTTTCCATTGCCTCCCAGGTTACCTaGCCAAGAGTTACTTCGAGG +
Preference number: 5 (lower is better)
Translates to: LNLLLTLFAQDLGVPFSIASQVT*PRVTSR
Trigger: CCTCGAAGTAACTCTTGGCAAGGTAACCTGGGAGGC...AATGGAAAAAGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR CAA 90 bp AGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGTTCTGAATCCACTATaGTACCTTAGGAAACTTGCT +
Preference number: 5 (lower is better)
Translates to: RCETPLPLLCSISEGLRIVLNPL*YLRKLA
Trigger: AGCAAGTTTCCTAAGGTACAATAGTGGATTCAGAAC...AATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp CATGCCAGGAGAAAAGTTGCTGCATCCAAAACCAGAGTAGTCTTATCCATTCAAGTGTCTTTGGTGCACTaGCTTAATCTCAGCAGCACA +
Preference number: 5 (lower is better)
Translates to: HARRKVAASKTRVVLSIQVSLVH*LNLSST
Trigger: TGTGCTGCTGAGATTAAGCAAGTGCACCAAAGACAC...TTGAATGGATAAGACTACTCTGGTTTTGGATGCAGCAACTTTTCTCCTGGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp ATAGCATTAGCCTTTTGTACACTCAGTACCAGGAAACATTCAGTGCACGTTACACTCACTGGCAGTACGTaGTCTCATGTGTCTTTGGTG +
Preference number: 5 (lower is better)
Translates to: IALAFCTLSTRKHSVHVTLTGST*SHVSLV
Trigger: CACCAAAGACACATGAGACAACGTACTGCCAGTGAG...TGTAACGTGCACTGAATGTTTCCTGGTACTGAGTGTACAAAAGGCTAATGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp AGGTTATTCCTAATCGAAGCTCCGGGTGTCTTGTTAAAAATACAGCAACCACAGAGCAACCACAGCAAATaGAAAGCCCTCACCATGTTG +
Preference number: 5 (lower is better)
Translates to: RLFLIEAPGVLLKIQQPQSNHSK*KALTML
Trigger: CAACATGGTGAGGGCTTTCAATTTGCTGTGGTTGCT...CTGTGGTTGCTGTATTTTTAACAAGACACCCGGAGCTTCGATTAGGAATAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp ATAGCATTAGCCTTTTGTACACTCAGTACCAGGAAACATTCAGTGCACGTTACACTGCCAGTTCCTAACTaGGCTCTCCCCTTCCATATA +
Preference number: 5 (lower is better)
Translates to: IALAFCTLSTRKHSVHVTLPVPN*ALPFHI
Trigger: TATATGGAAGGGGAGAGCCAAGTTAGGAACTGGCAG...TGTAACGTGCACTGAATGTTTCCTGGTACTGAGTGTACAAAAGGCTAATGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp GAACAAAACTTCAGGCCACAAAGGGTTAGAGTATTGGCAAACCAGAAGCTACCATGGAATGATGATTACTaGATGAAAAGCCTGCCAGCC +
Preference number: 5 (lower is better)
Translates to: EQNFRPQRVRVLANQKLPWNDDY*MKSLPA
Trigger: GGCTGGCAGGCTTTTCATCAAGTAATCATCATTCCA...TGGTAGCTTCTGGTTTGCCAATACTCTAACCCTTTGTGGCCTGAAGTTTTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp GGCAGTACGTTGTCTCATGTGTCTTTGGTGCACTTGCTTAATCTCAGCAGCACAACATATTGCCTGGTTTaGATTTCAAGGATACGTAGG +
Preference number: 5 (lower is better)
Translates to: GSTLSHVSLVHLLNLSSTTYCLV*ISRIRR
Trigger: CCTACGTATCCTTGAAATCAAAACCAGGCAATATGT...TGTGCTGCTGAGATTAAGCAAGTGCACCAAAGACACATGAGACAACGTACTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp GTAACCAGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCCAAAAACACACATATaGCCTGGTTTTGATTTCAAG +
Preference number: 5 (lower is better)
Translates to: VTRCETPLPLLCSISEGLPKTHI*PGFDFK
Trigger: CTTGAAATCAAAACCAGGCAATATGTGTGTTTTTGG...AAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCTGGTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp GAAAGCCCTCACCATGTTGCACTGTCCGATGTATTCCTTTCCACAGATTGCATGGGTGTTGAGTCATTTTaGCCCTTTAAAAAGACTGGT +
Preference number: 5 (lower is better)
Translates to: ESPHHVALSDVFLSTDCMGVESF*PFKKTG
Trigger: ACCAGTCTTTTTAAAGGGCAAAAATGACTCAACACC...CATGCAATCTGTGGAAAGGAATACATCGGACAGTGCAACATGGTGAGGGCTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp CTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGTCTGAAGAGCAGATAGATCCATATACATTTCCATaGGTGTTTGCCATAACCCCA +
Preference number: 5 (lower is better)
Translates to: LSSVASQRVFVLSEEQIDPYTFP*VFAITP
Trigger: TGGGGTTATGGCAAACACCAATGGAAATGTATATGG...ATCTATCTGCTCTTCAGACAATACGAAGACCCTCTGAGATGCTACAGAGGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS TCA 90 bp TGTATTCAGAGGACAGCAAATCATGATTTAGCACGACATCGAGAATaGATGACGTTCCAAAGGCATCAACCTGGAAGCTTGCTTGGTCAA +
Preference number: 5 (lower is better)
Translates to: CIQRTANHDLARHRE*MTFQRHQPGSLLGQ
Trigger: TTGACCAAGCAAGCTTCCAGGTTGATGCCTTTGGAACGTCATTCATTCTCGATGTCGTGCTAAATCATGATTTGCTGTCCTCTGAATACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000265727.11
ENST00000398201.8
ENST00000398203.8
ENST00000398204.8
ENST00000398209.7
ENST00000412441.5
ENST00000413139.2
ENST00000439864.5
ENST00000683525.1
ENST00000684002.1
CDS TCA 90 bp ATATTCAACATTTCTGGGAAAGCCTTTTCCAGTGGCTTCCCAAAGTaGATTAGAAGCTCCCTTTCAATCACAGTACAGTCAGCAGTCCCA +
Preference number: 5 (lower is better)
Translates to: IFNISGKAFSSGFPK*IRSSLSITVQSAVP
Trigger: TGGGACTGCTGACTGTACTGTGATTGAAAGGGAGCTTCTAATTCACTTTGGGAAGCCACTGGAAAAGGCTTTCCCAGAAATGTTGAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476330.1
CDS GCA 90 bp TCAAGCTTAACATGCCCACCACTGCAGTTTAATGTTCTTCCTTGCTaGACAACTAAAGTAGATGTGATTTCACCATCGAGTTCTCCAAGC +
Preference number: 5 (lower is better)
Translates to: SSLTCPPLQFNVLPC*TTKVDVISPSSSPS
Trigger: GCTTGGAGAACTCGATGGTGAAATCACATCTACTTTAGTTGTGCAGCAAGGAAGAACATTAAACTGCAGTGGTGGGCATGTTAAGCTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000265727.11
ENST00000398201.8
ENST00000398203.8
ENST00000398204.8
ENST00000398209.7
ENST00000413139.2
ENST00000682337.1
ENST00000683525.1
ENST00000684002.1
CDS-3UTR CAA 90 bp ATAGCATTAGCCTTTTGTACACTCAGTACCAGGAAACATTCAGTGCACGTTACAAGCTTAGAAGGTTTGTaGAAAAGGCAGGCACCACCT +
Preference number: 5 (lower is better)
Translates to: IALAFCTLSTRKHSVHVTSLEGL*KRQAPP
Trigger: AGGTGGTGCCTGCCTTTTCAACAAACCTTCTAAGCT...TGTAACGTGCACTGAATGTTTCCTGGTACTGAGTGTACAAAAGGCTAATGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp CTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTTTTTCCATTAGAGGTTCAAGAAGCTTAGAAGGTTaGTTGAAAAGGCAGGCACCA +
Preference number: 5 (lower is better)
Translates to: LLTLFAQDLGVPFSIRGSRSLEG*LKRQAP
Trigger: TGGTGCCTGCCTTTTCAACAAACCTTCTAAGCTTCT...TGAACCTCTAATGGAAAAAGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR CAA 90 bp GACTATCTGCTTAATTTACTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTGTTTCAATGAAGCCATaGCCACACTCAGGAGGATCA +
Preference number: 5 (lower is better)
Translates to: DYLLNLLLTLFAQDLGVPVSMKP*PHSGGS
Trigger: TGATCCTCCTGAGTGTGGCAATGGCTTCATTGAAAC...AGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATTAAGCAGATAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR CAA 90 bp ATAGCATTAGCCTTTTGTACACTCAGTACCAGGAAACATTCAGTGCACGTTACAGTTTCAATGAAGCCATaGCCACACTCAGGAGGATCA +
Preference number: 5 (lower is better)
Translates to: IALAFCTLSTRKHSVHVTVSMKP*PHSGGS
Trigger: TGATCCTCCTGAGTGTGGCAATGGCTTCATTGAAAC...TGTAACGTGCACTGAATGTTTCCTGGTACTGAGTGTACAAAAGGCTAATGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp ATAGCATTAGCCTTTTGTACACTCAGTACCAGGAAACATTCAGTGCACGTTACAAAGACCGTCACTGCATaGAGAGTCTTGAGTCAAGGT +
Preference number: 5 (lower is better)
Translates to: IALAFCTLSTRKHSVHVTKTVTA*RVLSQG
Trigger: ACCTTGACTCAAGACTCTCAATGCAGTGACGGTCTT...TGTAACGTGCACTGAATGTTTCCTGGTACTGAGTGTACAAAAGGCTAATGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp GACTATCTGCTTAATTTACTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTAGCACATCCCGTTTGTaGCACTGTATCCATGTGTCT +
Preference number: 5 (lower is better)
Translates to: DYLLNLLLTLFAQDLGVPSTSRL*HCIHVS
Trigger: AGACACATGGATACAGTGCAACAAACGGGATGTGCT...AGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATTAAGCAGATAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR CAA 90 bp TTGTGTTACTTGTTCAACTTAGCACCGCTATATTTAAAGATTGGGGCTATTTGCGTGCCAGCAACACCATaGCCAGACAGAGTGATACCA +
Preference number: 5 (lower is better)
Translates to: LCYLFNLAPLYLKIGAICVPATP*PDRVIP
Trigger: TGGTATCACTCTGTCTGGCAATGGTGTTGCTGGCAC...GCAAATAGCCCCAATCTTTAAATATAGCGGTGCTAAGTTGAACAAGTAACACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp GAACAAAACTTCAGGCCACAAAGGGTTAGAGTATTGGCAAACCAGAAGCTACCAATGCCTATTATGATATaGGTGCCAGCAACACCATTG +
Preference number: 5 (lower is better)
Translates to: EQNFRPQRVRVLANQKLPMPIMI*VPATPL
Trigger: CAATGGTGTTGCTGGCACCAATATCATAATAGGCAT...TGGTAGCTTCTGGTTTGCCAATACTCTAACCCTTTGTGGCCTGAAGTTTTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp CATGCCAGGAGAAAAGTTGCTGCATCCAAAACCAGAGTAGTCTTATCCATTCAACCTCTGATTTTCTTTTaGTTGCCTCCCAGGTTACCT +
Preference number: 5 (lower is better)
Translates to: HARRKVAASKTRVVLSIQPLIFF*LPPRLP
Trigger: AGGTAACCTGGGAGGCAACAAAAAGAAAATCAGAGG...TTGAATGGATAAGACTACTCTGGTTTTGGATGCAGCAACTTTTCTCCTGGCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp AAAAGTCACTTTATTTGCTACATCTTTCAATCTGTCTGCCCTTCTGTTCTTGGCCAGGAAGTGGAGGCATaGGGTAAGGGTATTTTCTGC +
Preference number: 5 (lower is better)
Translates to: KSHFICYIFQSVCPSVLGQEVEA*GKGIFC
Trigger: GCAGAAAATACCCTTACCCAATGCCTCCACTTCCTG...GCCAAGAACAGAAGGGCAGACAGATTGAAAGATGTAGCAAATAAAGTGACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp ATAGCATTAGCCTTTTGTACACTCAGTACCAGGAAACATTCAGTGCACGTTACATGTCGGTTCACTTTCTaGTCCTCATCAGGAAGTGGA +
Preference number: 5 (lower is better)
Translates to: IALAFCTLSTRKHSVHVTCRFTF*SSSGSG
Trigger: TCCACTTCCTGATGAGGACAAGAAAGTGAACCGACA...TGTAACGTGCACTGAATGTTTCCTGGTACTGAGTGTACAAAAGGCTAATGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp AGGTTATTCCTAATCGAAGCTCCGGGTGTCTTGTTAAAAATACAGCAACCACAGAATGAGAGAGCCCATTaGACCTCTGTTCTCGATAGT +
Preference number: 5 (lower is better)
Translates to: RLFLIEAPGVLLKIQQPQNERAH*TSVLDS
Trigger: ACTATCGAGAACAGAGGTCAAATGGGCTCTCTCATT...CTGTGGTTGCTGTATTTTTAACAAGACACCCGGAGCTTCGATTAGGAATAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp GAACAAAACTTCAGGCCACAAAGGGTTAGAGTATTGGCAAACCAGAAGCTACCATGTACCTTAGGAAACTaGCTACATTTGGGTCATGTG +
Preference number: 5 (lower is better)
Translates to: EQNFRPQRVRVLANQKLPCTLGN*LHLGHV
Trigger: CACATGACCCAAATGTAGCAAGTTTCCTAAGGTACA...TGGTAGCTTCTGGTTTGCCAATACTCTAACCCTTTGTGGCCTGAAGTTTTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp AACTTCAGGCCACAAAGGGTTAGAGTATTGGCAAACCAGAAGCTACCAGCTCACTTAGCCTATGGGATATaGGCCTTTCAAAGCTTTAAA +
Preference number: 5 (lower is better)
Translates to: NFRPQRVRVLANQKLPAHLAYGI*AFQSFK
Trigger: TTTAAAGCTTTGAAAGGCCAATATCCCATAGGCTAA...GTGAGCTGGTAGCTTCTGGTTTGCCAATACTCTAACCCTTTGTGGCCTGAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp AGATGTGAAACTCCGCTTCCTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTAAGATGATATGGATTTaGTCCATGGATACTATGGGA +
Preference number: 5 (lower is better)
Translates to: RCETPLPLLCSISEGLRIKMIWI*SMDTMG
Trigger: TCCCATAGTATCCATGGACAAAATCCATATCATCTT...AATACGAAGACCCTCTGAGATGCTACAGAGGAGAGGAAGCGGAGTTTCACATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp GAAAGCCCTCACCATGTTGCACTGTCCGATGTATTCCTTTCCACAGATTGCATGACATATAGATACTTCTaGAAACTCTCCCTTGAGACT +
Preference number: 5 (lower is better)
Translates to: ESPHHVALSDVFLSTDCMTYRYF*KLSLET
Trigger: AGTCTCAAGGGAGAGTTTCAAGAAGTATCTATATGT...CATGCAATCTGTGGAAAGGAATACATCGGACAGTGCAACATGGTGAGGGCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp GGCAGTACGTTGTCTCATGTGTCTTTGGTGCACTTGCTTAATCTCAGCAGCACACCAAAAACACACATATaGCCTGGTTTTGATTTCAAG +
Preference number: 5 (lower is better)
Translates to: GSTLSHVSLVHLLNLSSTPKTHI*PGFDFK
Trigger: CTTGAAATCAAAACCAGGCAATATGTGTGTTTTTGG...TGTGCTGCTGAGATTAAGCAAGTGCACCAAAGACACATGAGACAACGTACTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp CTCTCCTCTGTAGCATCTCAGAGGGTCTTCGTATTGTCTGAAGAGCAGATAGATGCATCACTTTTCTCTTaGATAAAATCCCTCCTGTAT +
Preference number: 5 (lower is better)
Translates to: LSSVASQRVFVLSEEQIDASLFS*IKSLLY
Trigger: ATACAGGAGGGATTTTATCAAAGAGAAAAGTGATGC...ATCTATCTGCTCTTCAGACAATACGAAGACCCTCTGAGATGCTACAGAGGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp AGGTTATTCCTAATCGAAGCTCCGGGTGTCTTGTTAAAAATACAGCAACCACAGACTGCATTGAGAGTCTaGAGTCAAGGTGCATTTCTT +
Preference number: 5 (lower is better)
Translates to: RLFLIEAPGVLLKIQQPQTALRV*SQGAFL
Trigger: AAGAAATGCACCTTGACTCAAGACTCTCAATGCAGT...CTGTGGTTGCTGTATTTTTAACAAGACACCCGGAGCTTCGATTAGGAATAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp CATGCCAGGAGAAAAGTTGCTGCATCCAAAACCAGAGTAGTCTTATCCATTCAAACTGCATTGAGAGTCTaGAGTCAAGGTGCATTTCTT +
Preference number: 5 (lower is better)
Translates to: HARRKVAASKTRVVLSIQTALRV*SQGAFL
Trigger: AAGAAATGCACCTTGACTCAAGACTCTCAATGCAGT...TTGAATGGATAAGACTACTCTGGTTTTGGATGCAGCAACTTTTCTCCTGGCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp GAACAAAACTTCAGGCCACAAAGGGTTAGAGTATTGGCAAACCAGAAGCTACCAGTTCTGAATCCACTATaGTACCTTAGGAAACTTGCT +
Preference number: 5 (lower is better)
Translates to: EQNFRPQRVRVLANQKLPVLNPL*YLRKLA
Trigger: AGCAAGTTTCCTAAGGTACAATAGTGGATTCAGAAC...TGGTAGCTTCTGGTTTGCCAATACTCTAACCCTTTGTGGCCTGAAGTTTTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp AGGTTATTCCTAATCGAAGCTCCGGGTGTCTTGTTAAAAATACAGCAACCACAGGTTTTGCTGGGCATTTaGTTCTCTCACTCAACTACT +
Preference number: 5 (lower is better)
Translates to: RLFLIEAPGVLLKIQQPQVLLGI*FSHSTT
Trigger: AGTAGTTGAGTGAGAGAACAAAATGCCCAGCAAAAC...CTGTGGTTGCTGTATTTTTAACAAGACACCCGGAGCTTCGATTAGGAATAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS CCA 90 bp CCATTCAGGTGGAAGGTCCAAATTTCAGGGCAATGTTATTATTCCTaGACTGAAAAAGGCAGGGTATATGACGGAAAAGCTAACATAAGT +
Preference number: 5 (lower is better)
Translates to: PFRWKVQISGQCYYS*TEKGRVYDGKANIS
Trigger: ACTTATGTTAGCTTTTCCGTCATATACCCTGCCTTTTTCAGTCCAGGAATAATAACATTGCCCTGAAATTTGGACCTTCCACCTGAATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000684002.1
CDS-3UTR CAA 90 bp AGCAATCTATACTTGAAAACTTTTTCCAAATCTATCTGCCATCTGCCATGTCAAGATATGGCAAACTTGTaGTCAGTCGCCCAGGTTTCC +
Preference number: 5 (lower is better)
Translates to: SNLYLKTFSKSICHLPCQDMANL*SVAQVS
Trigger: GGAAACCTGGGCGACTGACAACAAGTTTGCCATATC...TTGACATGGCAGATGGCAGATAGATTTGGAAAAAGTTTTCAAGTATAGATTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439864.5
CDS-3UTR CAA 90 bp CTTAATTTACTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTTTTTCCATTTCAGATATGGCAAACTaGTTGTCAGTCGCCCAGGTT +
Preference number: 5 (lower is better)
Translates to: LNLLLTLFAQDLGVPFSISDMAN*LSVAQV
Trigger: AACCTGGGCGACTGACAACAAGTTTGCCATATCTGA...AATGGAAAAAGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR CAA 90 bp GACTATCTGCTTAATTTACTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTACTGCATTGAGAGTCTaGAGTCAAGGTGCATTTCTT +
Preference number: 5 (lower is better)
Translates to: DYLLNLLLTLFAQDLGVPTALRV*SQGAFL
Trigger: AAGAAATGCACCTTGACTCAAGACTCTCAATGCAGT...AGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATTAAGCAGATAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR CAA 90 bp TTTGACTATCTGCTTAATTTACTTTTGACACTATTTGCACAGGACCTTGGAGTGAAGACCGTCACTGCATaGAGAGTCTTGAGTCAAGGT +
Preference number: 5 (lower is better)
Translates to: FDYLLNLLLTLFAQDLGVKTVTA*RVLSQG
Trigger: ACCTTGACTCAAGACTCTCAATGCAGTGACGGTCTT...CACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATTAAGCAGATAGTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR CAA 90 bp CTGCTTAATTTACTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTTTTTCCTGCCCCCAAATGTATTaGCATTGTCTATCTCTGGTT +
Preference number: 5 (lower is better)
Translates to: LLNLLLTLFAQDLGVPFSCPQMY*HCLSLV
Trigger: AACCAGAGATAGACAATGCAAATACATTTGGGGGCA...GGAAAAAGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATTAAGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR CAA 90 bp ATAGCATTAGCCTTTTGTACACTCAGTACCAGGAAACATTCAGTGCACGTTACATGCCCCCAAATGTATTaGCATTGTCTATCTCTGGTT +
Preference number: 5 (lower is better)
Translates to: IALAFCTLSTRKHSVHVTCPQMY*HCLSLV
Trigger: AACCAGAGATAGACAATGCAAATACATTTGGGGGCA...TGTAACGTGCACTGAATGTTTCCTGGTACTGAGTGTACAAAAGGCTAATGCTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp AATTTACTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTTTTTCCATTAGACAAAGCACATCCCGTTaGTTGCACTGTATCCATGTG +
Preference number: 5 (lower is better)
Translates to: NLLLTLFAQDLGVPFSIRQSTSR*LHCIHV
Trigger: CACATGGATACAGTGCAACAAACGGGATGTGCTTTG...TCTAATGGAAAAAGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR CAA 90 bp TTACTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTTTTTCCATTAGAGGTCCAAGCCTTGGGATATaGCCAATATTGGTACACAAA +
Preference number: 5 (lower is better)
Translates to: LLLTLFAQDLGVPFSIRGPSLGI*PILVHK
Trigger: TTTGTGTACCAATATTGGCAATATCCCAAGGCTTGG...ACCTCTAATGGAAAAAGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR CAA 90 bp GACTATCTGCTTAATTTACTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTATGCCTATTATGATATaGGTGCCAGCAACACCATTG +
Preference number: 5 (lower is better)
Translates to: DYLLNLLLTLFAQDLGVPMPIMI*VPATPL
Trigger: CAATGGTGTTGCTGGCACCAATATCATAATAGGCAT...AGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATTAAGCAGATAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR CAA 90 bp AAAAGTCACTTTATTTGCTACATCTTTCAATCTGTCTGCCCTTCTGTTCTTGGCGATGAAGAAGGAGACTaGGCAGGAGATAAAGTCTCA +
Preference number: 5 (lower is better)
Translates to: KSHFICYIFQSVCPSVLGDEEGD*AGDKVS
Trigger: TGAGACTTTATCTCCTGCCAAGTCTCCTTCTTCATC...GCCAAGAACAGAAGGGCAGACAGATTGAAAGATGTAGCAAATAAAGTGACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398204.8
CDS-3UTR CAA 90 bp AAAAGTCACTTTATTTGCTACATCTTTCAATCTGTCTGCCCTTCTGTTCTTGGCAATGAGAGAGCCCATTaGACCTCTGTTCTCGATAGT +
Preference number: 5 (lower is better)
Translates to: KSHFICYIFQSVCPSVLGNERAH*TSVLDS
Trigger: ACTATCGAGAACAGAGGTCAAATGGGCTCTCTCATT...GCCAAGAACAGAAGGGCAGACAGATTGAAAGATGTAGCAAATAAAGTGACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp ATAGCATTAGCCTTTTGTACACTCAGTACCAGGAAACATTCAGTGCACGTTACATTGTCTCATGTGTCTTaGGTGCACTTGCTTAATCTC +
Preference number: 5 (lower is better)
Translates to: IALAFCTLSTRKHSVHVTLSHVS*VHLLNL
Trigger: GAGATTAAGCAAGTGCACCAAAGACACATGAGACAA...TGTAACGTGCACTGAATGTTTCCTGGTACTGAGTGTACAAAAGGCTAATGCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp AGGTTATTCCTAATCGAAGCTCCGGGTGTCTTGTTAAAAATACAGCAACCACAGTCTGTATTGTGTTACTaGTTCAACTTAGCACCGCTA +
Preference number: 5 (lower is better)
Translates to: RLFLIEAPGVLLKIQQPQSVLCY*FNLAPL
Trigger: TAGCGGTGCTAAGTTGAACAAGTAACACAATACAGA...CTGTGGTTGCTGTATTTTTAACAAGACACCCGGAGCTTCGATTAGGAATAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp TTTGACTATCTGCTTAATTTACTTTTGACACTATTTGCACAGGACCTTGGAGTGGAAGTCCGTGGCATGTaGACAATGCAACAAATGAGT +
Preference number: 5 (lower is better)
Translates to: FDYLLNLLLTLFAQDLGVEVRGM*TMQQMS
Trigger: ACTCATTTGTTGCATTGTCAACATGCCACGGACTTC...CACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATTAAGCAGATAGTCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR CAA 90 bp AGGTTATTCCTAATCGAAGCTCCGGGTGTCTTGTTAAAAATACAGCAACCACAGTGGAGTAATGTTTACTaGCTGAAATTCAGATGGAAG +
Preference number: 5 (lower is better)
Translates to: RLFLIEAPGVLLKIQQPQWSNVY*LKFRWK
Trigger: CTTCCATCTGAATTTCAGCAAGTAAACATTACTCCA...CTGTGGTTGCTGTATTTTTAACAAGACACCCGGAGCTTCGATTAGGAATAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp TCTGAGACAGACACAAAATCACTTCTCTGGTATTTCTGCCAAAAATACATATCTTCAGATATGGCAAACTaGTTGTCAGTCGCCCAGGTT +
Preference number: 5 (lower is better)
Translates to: SETDTKSLLWYFCQKYISSDMAN*LSVAQV
Trigger: AACCTGGGCGACTGACAACAAGTTTGCCATATCTGA...AGATATGTATTTTTGGCAGAAATACCAGAGAAGTGATTTTGTGTCTGTCTCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439864.5
CDS-3UTR CAA 90 bp CTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTTTTTCCATTAGAGGTTCAGCATCACTTTTCTCTTaGATAAAATCCCTCCTGTAT +
Preference number: 5 (lower is better)
Translates to: LLTLFAQDLGVPFSIRGSASLFS*IKSLLY
Trigger: ATACAGGAGGGATTTTATCAAAGAGAAAAGTGATGC...TGAACCTCTAATGGAAAAAGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR CAA 90 bp AAAAGTCACTTTATTTGCTACATCTTTCAATCTGTCTGCCCTTCTGTTCTTGGCTGCCCCCAAATGTATTaGCATTGTCTATCTCTGGTT +
Preference number: 5 (lower is better)
Translates to: KSHFICYIFQSVCPSVLGCPQMY*HCLSLV
Trigger: AACCAGAGATAGACAATGCAAATACATTTGGGGGCA...GCCAAGAACAGAAGGGCAGACAGATTGAAAGATGTAGCAAATAAAGTGACTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp GGATATCACATGTTTTGGACAAATACGAATTATGGAGAGACACATTTACAGCATCGAGTTCTCCAAGCCTaGGGATATTGCCAATATTGG +
Preference number: 5 (lower is better)
Translates to: GYHMFWTNTNYGETHLQHRVLQA*GYCQYW
Trigger: CCAATATTGGCAATATCCCAAGGCTTGGAGAACTCG...ATGCTGTAAATGTGTCTCTCCATAATTCGTATTTGTCCAAAACATGTGATATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp TTTGACTATCTGCTTAATTTACTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTCTGATTTTCTTTTaGTTGCCTCCCAGGTTACCT +
Preference number: 5 (lower is better)
Translates to: FDYLLNLLLTLFAQDLGVPLIFF*LPPRLP
Trigger: AGGTAACCTGGGAGGCAACAAAAAGAAAATCAGAGG...CACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATTAAGCAGATAGTCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR CAA 90 bp CATGCCAGGAGAAAAGTTGCTGCATCCAAAACCAGAGTAGTCTTATCCATTCAAAAGATGATATGGATTTaGTCCATGGATACTATGGGA +
Preference number: 5 (lower is better)
Translates to: HARRKVAASKTRVVLSIQKMIWI*SMDTMG
Trigger: TCCCATAGTATCCATGGACAAAATCCATATCATCTT...TTGAATGGATAAGACTACTCTGGTTTTGGATGCAGCAACTTTTCTCCTGGCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp CATGCCAGGAGAAAAGTTGCTGCATCCAAAACCAGAGTAGTCTTATCCATTCAAACATATAGATACTTCTaGAAACTCTCCCTTGAGACT +
Preference number: 5 (lower is better)
Translates to: HARRKVAASKTRVVLSIQTYRYF*KLSLET
Trigger: AGTCTCAAGGGAGAGTTTCAAGAAGTATCTATATGT...TTGAATGGATAAGACTACTCTGGTTTTGGATGCAGCAACTTTTCTCCTGGCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS TCA 90 bp GGAGACATGGTTTACAGTTCTTTGACTATCTGCTTAATTTACTTTTaGCACTATTTGCACAGGACCTTGGAGTGCCTTTTTCCATTAGAG +
Preference number: 5 (lower is better)
Translates to: GDMVYSSLTICLIYF*HYLHRTLECLFPLE
Trigger: CTCTAATGGAAAAAGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATTAAGCAGATAGTCAAAGAACTGTAAACCATGTCTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000682337.1
ENST00000684002.1
CDS TCA 90 bp TGGTATCACTTGAAATTGTCTACTGTGTCTATAAAGTATCCATGTTaGCAAGCCACTTACAAGACAATACCATTCAGGTGGAAGGTCCAA +
Preference number: 5 (lower is better)
Translates to: WYHLKLSTVSIKYPC*QATYKTIPFRWKVQ
Trigger: TTGGACCTTCCACCTGAATGGTATTGTCTTGTAAGTGGCTTGTCAACATGGATACTTTATAGACACAGTAGACAATTTCAAGTGATACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684002.1
CDS GCA 90 bp TTTAAAAGGGAAACTTATTCCATTAGTCTGAGAGAATGCTTAGATTaGAGCCATGAAGACCTCATAGTGGTGGTTTTAGATCATGAGCAG +
Preference number: 5 (lower is better)
Translates to: FKRETYSISLRECLD*SHEDLIVVVLDHEQ
Trigger: CTGCTCATGATCTAAAACCACCACTATGAGGTCTTCATGGCTGCAATCTAAGCATTCTCTCAGACTAATGGAATAAGTTTCCCTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684002.1
CDS-3UTR CAA 90 bp TTTGACTATCTGCTTAATTTACTTTTGACACTATTTGCACAGGACCTTGGAGTGTTAACTTCCACAGTCTaGCCTCCATGTTCAATGTGT +
Preference number: 5 (lower is better)
Translates to: FDYLLNLLLTLFAQDLGVLTSTV*PPCSMC
Trigger: ACACATTGAACATGGAGGCAAGACTGTGGAAGTTAA...CACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATTAAGCAGATAGTCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR CAA 90 bp AATTTACTTTTGACACTATTTGCACAGGACCTTGGAGTGCCTTTTTCCATTAGATGTCTATCTCTGGTTTaGCATCTTCCTCCAAAGCAA +
Preference number: 5 (lower is better)
Translates to: NLLLTLFAQDLGVPFSIRCLSLV*HLPPKQ
Trigger: TTGCTTTGGAGGAAGATGCAAAACCAGAGATAGACA...TCTAATGGAAAAAGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS-3UTR CAA 90 bp GGATATCACATGTTTTGGACAAATACGAATTATGGAGAGACACATTTACAGCATCAGAGGGTCTTCGTATaGTCTGAAGAGCAGATAGAT +
Preference number: 5 (lower is better)
Translates to: GYHMFWTNTNYGETHLQHQRVFV*SEEQID
Trigger: ATCTATCTGCTCTTCAGACAATACGAAGACCCTCTG...ATGCTGTAAATGTGTCTCTCCATAATTCGTATTTGTCCAAAACATGTGATATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp TTGTGTTACTTGTTCAACTTAGCACCGCTATATTTAAAGATTGGGGCTATTTGCTGTACCTTAGGAAACTaGCTACATTTGGGTCATGTG +
Preference number: 5 (lower is better)
Translates to: LCYLFNLAPLYLKIGAICCTLGN*LHLGHV
Trigger: CACATGACCCAAATGTAGCAAGTTTCCTAAGGTACA...GCAAATAGCCCCAATCTTTAAATATAGCGGTGCTAAGTTGAACAAGTAACACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp ATAGCATTAGCCTTTTGTACACTCAGTACCAGGAAACATTCAGTGCACGTTACAGGGATATCACATGTTTaGGACAAATACGAATTATGG +
Preference number: 5 (lower is better)
Translates to: IALAFCTLSTRKHSVHVTGISHV*DKYELW
Trigger: CCATAATTCGTATTTGTCCAAAACATGTGATATCCC...TGTAACGTGCACTGAATGTTTCCTGGTACTGAGTGTACAAAAGGCTAATGCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp GGATATCACATGTTTTGGACAAATACGAATTATGGAGAGACACATTTACAGCATCAAAGGGTTAGAGTATaGGCAAACCAGAAGCTACCA +
Preference number: 5 (lower is better)
Translates to: GYHMFWTNTNYGETHLQHQRVRV*ANQKLP
Trigger: TGGTAGCTTCTGGTTTGCCAATACTCTAACCCTTTG...ATGCTGTAAATGTGTCTCTCCATAATTCGTATTTGTCCAAAACATGTGATATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp TTGTGTTACTTGTTCAACTTAGCACCGCTATATTTAAAGATTGGGGCTATTTGCACCCTTTATGAATGGTaGAAGCTGCTCAACTCAAAC +
Preference number: 5 (lower is better)
Translates to: LCYLFNLAPLYLKIGAICTLYEW*KLLNSN
Trigger: GTTTGAGTTGAGCAGCTTCAACCATTCATAAAGGGT...GCAAATAGCCCCAATCTTTAAATATAGCGGTGCTAAGTTGAACAAGTAACACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp TCTGAGACAGACACAAAATCACTTCTCTGGTATTTCTGCCAAAAATACATATCTTTAACTTCCACAGTCTaGCCTCCATGTTCAATGTGT +
Preference number: 5 (lower is better)
Translates to: SETDTKSLLWYFCQKYISLTSTV*PPCSMC
Trigger: ACACATTGAACATGGAGGCAAGACTGTGGAAGTTAA...AGATATGTATTTTTGGCAGAAATACCAGAGAAGTGATTTTGTGTCTGTCTCAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439864.5
CDS-3UTR CAA 90 bp TCTATCTGCCATCTGCCATGTCAAATCCTAATTGTGTTATGTAGCAGAAAGGATTGGAGTAATGTTTACTaGCTGAAATTCAGATGGAAG +
Preference number: 5 (lower is better)
Translates to: SICHLPCQILIVLCSRKDWSNVY*LKFRWK
Trigger: CTTCCATCTGAATTTCAGCAAGTAAACATTACTCCA...ATCCTTTCTGCTACATAACACAATTAGGATTTGACATGGCAGATGGCAGATAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439864.5
CDS-3UTR CAA 90 bp GGATATCACATGTTTTGGACAAATACGAATTATGGAGAGACACATTTACAGCATCCAAGCCTTGGGATATaGCCAATATTGGTACACAAA +
Preference number: 5 (lower is better)
Translates to: GYHMFWTNTNYGETHLQHPSLGI*PILVHK
Trigger: TTTGTGTACCAATATTGGCAATATCCCAAGGCTTGG...ATGCTGTAAATGTGTCTCTCCATAATTCGTATTTGTCCAAAACATGTGATATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp AAAAGTCACTTTATTTGCTACATCTTTCAATCTGTCTGCCCTTCTGTTCTTGGCTTAGCCTATGGGATATaGGCCTTTCAAAGCTTTAAA +
Preference number: 5 (lower is better)
Translates to: KSHFICYIFQSVCPSVLGLAYGI*AFQSFK
Trigger: TTTAAAGCTTTGAAAGGCCAATATCCCATAGGCTAA...GCCAAGAACAGAAGGGCAGACAGATTGAAAGATGTAGCAAATAAAGTGACTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp GGATATCACATGTTTTGGACAAATACGAATTATGGAGAGACACATTTACAGCATTTGTCTCATGTGTCTTaGGTGCACTTGCTTAATCTC +
Preference number: 5 (lower is better)
Translates to: GYHMFWTNTNYGETHLQHLSHVS*VHLLNL
Trigger: GAGATTAAGCAAGTGCACCAAAGACACATGAGACAA...ATGCTGTAAATGTGTCTCTCCATAATTCGTATTTGTCCAAAACATGTGATATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp AGCAATCTATACTTGAAAACTTTTTCCAAATCTATCTGCCATCTGCCATGTCAAATGTGTGATCCTGGATaGGATTTGGATGGGGAAAAT +
Preference number: 5 (lower is better)
Translates to: SNLYLKTFSKSICHLPCQMCDPG*DLDGEN
Trigger: ATTTTCCCCATCCAAATCCAATCCAGGATCACACAT...TTGACATGGCAGATGGCAGATAGATTTGGAAAAAGTTTTCAAGTATAGATTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000439864.5
CDS CCA 90 bp TCACCACTTGCTAACTTTCTTTTGTCTGAGATAATACCAATATTATaGGCTAATGACTGGGCAAGTGTAACAGCCATTAAATCAGTTTTC +
Preference number: 5 (lower is better)
Translates to: SPLANFLLSEIIPIL*ANDWASVTAIKSVF
Trigger: GAAAACTGATTTAATGGCTGTTACACTTGCCCAGTCATTAGCCCATAATATTGGTATTATCTCAGACAAAAGAAAGTTAGCAAGTGGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000265727.11
ENST00000398201.8
ENST00000398203.8
ENST00000398204.8
ENST00000398209.7
ENST00000413139.2
ENST00000682337.1
ENST00000683525.1
ENST00000684002.1
CDS-3UTR CAA 90 bp TTTGACTATCTGCTTAATTTACTTTTGACACTATTTGCACAGGACCTTGGAGTGTGGAGTAATGTTTACTaGCTGAAATTCAGATGGAAG +
Preference number: 5 (lower is better)
Translates to: FDYLLNLLLTLFAQDLGVWSNVY*LKFRWK
Trigger: CTTCCATCTGAATTTCAGCAAGTAAACATTACTCCA...CACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATTAAGCAGATAGTCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398201.8
CDS TCA 90 bp ATGCAAAACAAACCAAACAACATTCCAAGAAGAGTTTATCAACAATaGGCCCTAAAGCATCCAAGCGCTTTGGGAATATATAAGATAAAC +
Preference number: 5 (lower is better)
Translates to: MQNKPNNIPRRVYQQ*ALKHPSALGIYKIN
Trigger: GTTTATCTTATATATTCCCAAAGCGCTTGGATGCTTTAGGGCTCATTGTTGATAAACTCTTCTTGGAATGTTGTTTGGTTTGTTTTGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684002.1
CDS-3UTR CAA 90 bp GGATATCACATGTTTTGGACAAATACGAATTATGGAGAGACACATTTACAGCATGCATCACTTTTCTCTTaGATAAAATCCCTCCTGTAT +
Preference number: 5 (lower is better)
Translates to: GYHMFWTNTNYGETHLQHASLFS*IKSLLY
Trigger: ATACAGGAGGGATTTTATCAAAGAGAAAAGTGATGC...ATGCTGTAAATGTGTCTCTCCATAATTCGTATTTGTCCAAAACATGTGATATCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398204.8
ENST00000398209.7
CDS-3UTR CAA 90 bp TCTGAGACAGACACAAAATCACTTCTCTGGTATTTCTGCCAAAAATACATATCTGCATCACTTTTCTCTTaGATAAAATCCCTCCTGTAT +
Preference number: 5 (lower is better)
Translates to: SETDTKSLLWYFCQKYISASLFS*IKSLLY
Trigger: ATACAGGAGGGATTTTATCAAAGAGAAAAGTGATGC...AGATATGTATTTTTGGCAGAAATACCAGAGAAGTGATTTTGTGTCTGTCTCAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000439864.5
CDS CCA 72 bp ACCTCCACCCAGCCCCGGCCGGTGCTGCGGCGGCCGTaGCGCTGCAACCTCCACCGCGGCTCAGTGCTGCAT +
Preference number: 6 (lower is better)
Translates to: TSTQPRPVLRRP*RCNLHRGSVLH
Trigger: ATGCAGCACTGAGCCGCGGTGGAGGTTGCAGCGCCACGGCCGCCGCAGCACCGGCCGGGGCTGGGTGGAGGT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398204.8
ENST00000413139.2
ENST00000439864.5
CDS GCA 72 bp ACCCAGCCCCGGCCGGTGCTGCGGCGGCCGTGGCGCTaGAACCTCCACCGCGGCTCAGTGCTGCATTGTGCT +
Preference number: 6 (lower is better)
Translates to: TQPRPVLRRPWR*NLHRGSVLHCA
Trigger: AGCACAATGCAGCACTGAGCCGCGGTGGAGGTTGCAGCGCCACGGCCGCCGCAGCACCGGCCGGGGCTGGGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398204.8
ENST00000413139.2
ENST00000439864.5
CDS GCA 72 bp GGCCGTGGCGCTGCAACCTCCACCGCGGCTCAGTGCTaGATTGTGCTTCGCGGACGCTTCCGCTGGCGGGGG +
Preference number: 6 (lower is better)
Translates to: GRGAATSTAAQC*IVLRGRFRWRG
Trigger: CCCCCGCCAGCGGAAGCGTCCGCGAAGCACAATGCAGCACTGAGCCGCGGTGGAGGTTGCAGCGCCACGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398204.8
ENST00000413139.2
ENST00000439864.5
CDS GCA 72 bp GGCGGCCGTGGCGCTGCAACCTCCACCGCGGCTCAGTaGTGCATTGTGCTTCGCGGACGCTTCCGCTGGCGG +
Preference number: 6 (lower is better)
Translates to: GGRGAATSTAAQ*CIVLRGRFRWR
Trigger: CCGCCAGCGGAAGCGTCCGCGAAGCACAATGCAGCACTGAGCCGCGGTGGAGGTTGCAGCGCCACGGCCGCC
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398204.8
ENST00000413139.2
ENST00000439864.5
CDS GCA 72 bp AGAAGGGCACGGACACAGCCACTGCCGCCTGCATGGTaGTGCCGTCAGCCCGCCTCGCCCGAGACGCTCAGC +
Preference number: 6 (lower is better)
Translates to: RRARTQPLPPAW*CRQPASPETLS
Trigger: GCTGAGCGTCTCGGGCGAGGCGGGCTGACGGCAGCACCATGCAGGCGGCAGTGGCTGTGTCCGTGCCCTTCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265727.11
ENST00000398201.8
ENST00000398204.8
ENST00000398209.7
ENST00000412441.5
ENST00000413139.2
ENST00000439864.5
ENST00000683525.1
CDS CCA 72 bp GCAAGAAGGGCACGGACACAGCCACTGCCGCCTGCATaGTGCTGCCGTCAGCCCGCCTCGCCCGAGACGCTC +
Preference number: 6 (lower is better)
Translates to: ARRARTQPLPPA*CCRQPASPETL
Trigger: GAGCGTCTCGGGCGAGGCGGGCTGACGGCAGCACCATGCAGGCGGCAGTGGCTGTGTCCGTGCCCTTCTTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265727.11
ENST00000398201.8
ENST00000398204.8
ENST00000398209.7
ENST00000412441.5
ENST00000413139.2
ENST00000439864.5
ENST00000683525.1
CDS GCA 72 bp AGCAGCAAGAAGGGCACGGACACAGCCACTGCCGCCTaGATGGTGCTGCCGTCAGCCCGCCTCGCCCGAGAC +
Preference number: 6 (lower is better)
Translates to: SSKKGTDTATAA*MVLPSARLARD
Trigger: GTCTCGGGCGAGGCGGGCTGACGGCAGCACCATGCAGGCGGCAGTGGCTGTGTCCGTGCCCTTCTTGCTGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265727.11
ENST00000398201.8
ENST00000398204.8
ENST00000398209.7
ENST00000412441.5
ENST00000413139.2
ENST00000439864.5
ENST00000683525.1
CDS GCA 72 bp GACACAGAGCAGCAAGAAGGGCACGGACACAGCCACTaGCGCCTGCATGGTGCTGCCGTCAGCCCGCCTCGC +
Preference number: 6 (lower is better)
Translates to: DTEQQEGHGHSH*RLHGAAVSPPR
Trigger: GCGAGGCGGGCTGACGGCAGCACCATGCAGGCGGCAGTGGCTGTGTCCGTGCCCTTCTTGCTGCTCTGTGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265727.11
ENST00000398201.8
ENST00000398204.8
ENST00000398209.7
ENST00000412441.5
ENST00000413139.2
ENST00000439864.5
ENST00000683525.1
CDS CCA 72 bp GGGGCTGTCAGAGCCCCCTGGGCTTATGCCTTGGGATaGGACTGTCTGGGCGAGGGAGTGCCCAGGCTCAGG +
Preference number: 6 (lower is better)
Translates to: GAVRAPWAYALG*DCLGEGVPRLR
Trigger: CCTGAGCCTGGGCACTCCCTCGCCCAGACAGTCCCATCCCAAGGCATAAGCCCAGGGGGCTCTGACAGCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426930.5
CDS CCA 72 bp GTCTGGGGGCTGTCAGAGCCCCCTGGGCTTATGCCTTaGGATGGGACTGTCTGGGCGAGGGAGTGCCCAGGC +
Preference number: 6 (lower is better)
Translates to: VWGLSEPPGLMP*DGTVWARECPG
Trigger: GCCTGGGCACTCCCTCGCCCAGACAGTCCCATCCCAAGGCATAAGCCCAGGGGGCTCTGACAGCCCCCAGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000426930.5
CDS TCA 72 bp CGTGCCGACTTTCGTCTTCGCCGCCCGAGCGGTAGATaGGGCGCAGTGGCACGATGCTCTGGCGCTCCACGA +
Preference number: 6 (lower is better)
Translates to: RADFRLRRPSGR*GAVARCSGAPR
Trigger: TCGTGGAGCGCCAGAGCATCGTGCCACTGCGCCTCATCTACCGCTCGGGCGGCGAAGACGAAAGTCGGCACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000265727.11
ENST00000398201.8
ENST00000398203.8
ENST00000398204.8
ENST00000398209.7
ENST00000412441.5
ENST00000413139.2
ENST00000439864.5
ENST00000683525.1
ENST00000684002.1
CDS GCA 72 bp TCCCTGTCTGGGGGCTGTCAGAGCCCCCTGGGCTTATaGCTTGGGATGGGACTGTCTGGGCGAGGGAGTGCC +
Preference number: 6 (lower is better)
Translates to: SLSGGCQSPLGL*LGMGLSGRGSA
Trigger: GGCACTCCCTCGCCCAGACAGTCCCATCCCAAGGCATAAGCCCAGGGGGCTCTGACAGCCCCCAGACAGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000426930.5
CDS CAA 90 bp TCGGAACCCAACTGGGAAGGACGCAGAGACACCAGCCCGAGAGCCTaGGACCAGCTCATCCGAGAGCAACCAGGAGCGGGGCCCAGAAGC +
Preference number: 6 (lower is better)
Translates to: SEPNWEGRRDTSPRA*DQLIREQPGAGPRS
Trigger: GCTTCTGGGCCCCGCTCCTGGTTGCTCTCGGATGAGCTGGTCCAAGGCTCTCGGGCTGGTGTCTCTGCGTCCTTCCCAGTTGGGTTCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398203.8
CDS CCA 72 bp TTCGTCTTCGCCGCCCGAGCGGTAGATGAGGCGCAGTaGCACGATGCTCTGGCGCTCCACGAAGCGGTTTTC +
Preference number: 6 (lower is better)
Translates to: FVFAARAVDEAQ*HDALALHEAVF
Trigger: GAAAACCGCTTCGTGGAGCGCCAGAGCATCGTGCCACTGCGCCTCATCTACCGCTCGGGCGGCGAAGACGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000265727.11
ENST00000398201.8
ENST00000398203.8
ENST00000398204.8
ENST00000398209.7
ENST00000412441.5
ENST00000413139.2
ENST00000439864.5
ENST00000683525.1
ENST00000684002.1
CDS CCA 72 bp ATCCAGACTCCCTGTCTGGGGGCTGTCAGAGCCCCCTaGGCTTATGCCTTGGGATGGGACTGTCTGGGCGAG +
Preference number: 6 (lower is better)
Translates to: IQTPCLGAVRAP*AYALGWDCLGE
Trigger: CTCGCCCAGACAGTCCCATCCCAAGGCATAAGCCCAGGGGGCTCTGACAGCCCCCAGACAGGGAGTCTGGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000426930.5
CDS CCA 72 bp AGCGAGTGCTGCATTGGGCGGTTGGCTGTAGCTAAGTaGTTTCTAGCGCCTCCCACCTCATCCCCTGGCAAA +
Preference number: 6 (lower is better)
Translates to: SECCIGRLAVAK*FLAPPTSSPGK
Trigger: TTTGCCAGGGGATGAGGTGGGAGGCGCTAGAAACCACTTAGCTACAGCCAACCGCCCAATGCAGCACTCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398204.8
CDS GCA 72 bp TCCTTTCAGCAACGAGCAAATCCCACCAATATAAGCTaGCCCGCTCCGGCTACTCTCAAATTGACTTCCCGA +
Preference number: 6 (lower is better)
Translates to: SFQQRANPTNIS*PAPATLKLTSR
Trigger: TCGGGAAGTCAATTTGAGAGTAGCCGGAGCGGGGCAGCTTATATTGGTGGGATTTGCTCGTTGCTGAAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000265727.11
ENST00000398201.8
ENST00000398203.8
ENST00000398204.8
ENST00000398209.7
ENST00000413139.2
ENST00000682337.1
ENST00000683525.1
ENST00000684002.1
CDS CAA 72 bp GTCTCAAGCTGGAGTCAACATGAAAGTATGTTCCAGTaGGCTCTGCAAGGAGCAGATAGGGTCCCACTCTTC +
Preference number: 6 (lower is better)
Translates to: VSSWSQHESMFQ*ALQGADRVPLF
Trigger: GAAGAGTGGGACCCTATCTGCTCCTTGCAGAGCCAACTGGAACATACTTTCATGTTGACTCCAGCTTGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476330.1
CDS CCA 72 bp TCTCAAGCTGGAGTCAACATGAAAGTATGTTCCAGTTaGCTCTGCAAGGAGCAGATAGGGTCCCACTCTTCT +
Preference number: 6 (lower is better)
Translates to: SQAGVNMKVCSS*LCKEQIGSHSS
Trigger: AGAAGAGTGGGACCCTATCTGCTCCTTGCAGAGCCAACTGGAACATACTTTCATGTTGACTCCAGCTTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476330.1
CDS CAA 72 bp TCCCGTCATAGAACATCCCATGAAGTCCGTGGCATGTaGACAATGCAACAAATGAGTCAGGGTTTCCTCGGA +
Preference number: 6 (lower is better)
Translates to: SRHRTSHEVRGM*TMQQMSQGFLG
Trigger: TCCGAGGAAACCCTGACTCATTTGTTGCATTGTCAACATGCCACGGACTTCATGGGATGTTCTATGACGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000265727.11
ENST00000398201.8
ENST00000398203.8
ENST00000398204.8
ENST00000398209.7
ENST00000412441.5
ENST00000413139.2
ENST00000439864.5
ENST00000478920.1
ENST00000682337.1
ENST00000683525.1
ENST00000684002.1
CDS CAA 72 bp AGCACATCCCGTTTGTTGCACTGTATCCATGTGTCTTaGTCTTTCCCACAGTTACCCTTCTCCGTCCCTTCA +
Preference number: 6 (lower is better)
Translates to: STSRLLHCIHVS*SFPQLPFSVPS
Trigger: TGAAGGGACGGAGAAGGGTAACTGTGGGAAAGACAAAGACACATGGATACAGTGCAACAAACGGGATGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000265727.11
ENST00000398201.8
ENST00000398203.8
ENST00000398204.8
ENST00000398209.7
ENST00000413139.2
ENST00000682337.1
ENST00000683525.1
ENST00000684002.1
CDS TCA 72 bp CGACAGAAAAGCAGACCTCTTCTTAGAACTAGATGCTaGGTTTGTGCTGACTCCGGGAGGAATGTCGCTATA +
Preference number: 6 (lower is better)
Translates to: RQKSRPLLRTRC*VCADSGRNVAI
Trigger: TATAGCGACATTCCTCCCGGAGTCAGCACAAACTCAGCATCTAGTTCTAAGAAGAGGTCTGCTTTTCTGTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413139.2
ENST00000683525.1
CDS TCA 72 bp CTTACAAGGCTGTGTGAGTATTGGGGAGAGGAAGGGTaGCCCTTTGAAATGGTTGAATCCCAGATGATGAGA +
Preference number: 6 (lower is better)
Translates to: LTRLCEYWGEEG*PFEMVESQMMR
Trigger: TCTCATCATCTGGGATTCAACCATTTCAAAGGGTCACCCTTCCTCTCCCCAATACTCACACAGCCTTGTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684002.1
CDS CCA 72 bp ATCAAATTCCCTTCATATAGAACCAAGACCCCACAATaGCAGGTGACTGGAGGAAAAAGCCTGCAGGTGAGA +
Preference number: 6 (lower is better)
Translates to: IKFPSYRTKTPQ*QVTGGKSLQVR
Trigger: TCTCACCTGCAGGCTTTTTCCTCCAGTCACCTGCCATTGTGGGGTCTTGGTTCTATATGAAGGGAATTTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000684002.1
CDS TCA 72 bp CCAGCACTAAAATGGTGCCAGCAATTATGCCTATTATaGTATTGGTGCCAGCAACACCATTGCCAGACAGAG +
Preference number: 6 (lower is better)
Translates to: PALKWCQQLCLL*YWCQQHHCQTE
Trigger: CTCTGTCTGGCAATGGTGTTGCTGGCACCAATATCATAATAGGCATAATTGCTGGCACCATTTTAGTGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000265727.11
ENST00000398201.8
ENST00000398203.8
ENST00000398204.8
ENST00000398209.7
ENST00000413139.2
ENST00000426930.5
ENST00000682337.1
ENST00000683525.1
ENST00000684002.1
CDS TCA 72 bp AGTCAACTGTATCTGGTATATGGTCTTCTGGGATTCTaGCTTCAAAAACATCTGAATCTGCGGGCCACCGAG +
Preference number: 6 (lower is better)
Translates to: SQLYLVYGLLGF*LQKHLNLRATE
Trigger: CTCGGTGGCCCGCAGATTCAGATGTTTTTGAAGTCAGAATCCCAGAAGACCATATACCAGATACAGTTGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412441.5
CDS TCA 72 bp TTACTCTCTATAGAGGGTCTCAAGCTGGAGTCAACATaGAAGTATGTTCCAGTTGGCTCTGCAAGGAGCAGA +
Preference number: 6 (lower is better)
Translates to: LLSIEGLKLEST*KYVPVGSARSR
Trigger: TCTGCTCCTTGCAGAGCCAACTGGAACATACTTTCATGTTGACTCCAGCTTGAGACCCTCTATAGAGAGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476330.1
CDS CAA 72 bp CTGGAGGCAATAGACCCAGTTGATGAAGAAGGAGACTaGGCAGGAGATAAAGTCTCAGTTGAATTAGACCGA +
Preference number: 6 (lower is better)
Translates to: LEAIDPVDEEGD*AGDKVSVELDR
Trigger: TCGGTCTAATTCAACTGAGACTTTATCTCCTGCCAAGTCTCCTTCTTCATCAACTGGGTCTATTGCCTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265727.11
ENST00000398204.8
CDS CAA 72 bp GTGCTCATGTTTCCATTAGGAACCAACCCTCAGAGGTaGCCTTCCAAGTGTCTGACCATGAATTGTGTGAAT +
Preference number: 6 (lower is better)
Translates to: VLMFPLGTNPQR*PSKCLTMNCVN
Trigger: ATTCACACAATTCATGGTCAGACACTTGGAAGGCAACCTCTGAGGGTTGGTTCCTAATGGAAACATGAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476330.1
CDS CAA 90 bp AACTCACGTAGGGTGATCAATGGATTTTCAGATATGGCAAACTTGTaGTCAGTCGCCCAGGTTTCCATAGCAACCAATACTATCCTGGTC +
Preference number: 6 (lower is better)
Translates to: NSRRVINGFSDMANL*SVAQVSIATNTILV
Trigger: GACCAGGATAGTATTGGTTGCTATGGAAACCTGGGCGACTGACAACAAGTTTGCCATATCTGAAAATCCATTGATCACCCTACGTGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000265727.11
ENST00000398201.8
ENST00000398203.8
ENST00000398204.8
ENST00000398209.7
ENST00000413139.2
ENST00000439864.5
ENST00000682337.1
ENST00000683525.1
ENST00000684002.1
CDS TCA 72 bp AGGACAGCAAATCATGATTTAGCACGACATCGAGAATaGATGACGTTCCAAAGGCATCAACCTGGAAGCTTG +
Preference number: 6 (lower is better)
Translates to: RTANHDLARHRE*MTFQRHQPGSL
Trigger: CAAGCTTCCAGGTTGATGCCTTTGGAACGTCATTCATTCTCGATGTCGTGCTAAATCATGATTTGCTGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000265727.11
ENST00000398201.8
ENST00000398203.8
ENST00000398204.8
ENST00000398209.7
ENST00000412441.5
ENST00000413139.2
ENST00000439864.5
ENST00000683525.1
ENST00000684002.1
CDS GCA 72 bp AGCAACACCATTGCCAGACAGAGTGATACCAGTCTTTaGATCATCATTGTGAGGGAAGTAAGTGTTGCAATC +
Preference number: 6 (lower is better)
Translates to: SNTIARQSDTSL*IIIVREVSVAI
Trigger: GATTGCAACACTTACTTCCCTCACAATGATGATGCAAAGACTGGTATCACTCTGTCTGGCAATGGTGTTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000265727.11
ENST00000398201.8
ENST00000398203.8
ENST00000398204.8
ENST00000398209.7
ENST00000413139.2
ENST00000426930.5
ENST00000682337.1
ENST00000683525.1
ENST00000684002.1
CDS GCA 72 bp ACATGCCCACCACTGCAGTTTAATGTTCTTCCTTGCTaGACAACTAAAGTAGATGTGATTTCACCATCGAGT +
Preference number: 6 (lower is better)
Translates to: TCPPLQFNVLPC*TTKVDVISPSS
Trigger: ACTCGATGGTGAAATCACATCTACTTTAGTTGTGCAGCAAGGAAGAACATTAAACTGCAGTGGTGGGCATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000265727.11
ENST00000398201.8
ENST00000398203.8
ENST00000398204.8
ENST00000398209.7
ENST00000413139.2
ENST00000682337.1
ENST00000683525.1
ENST00000684002.1
CDS GCA 72 bp CAGTCTTTGCATCATCATTGTGAGGGAAGTAAGTGTTaGAATCAGAACCTATCCAGTGTCTGTTACACACAC +
Preference number: 6 (lower is better)
Translates to: QSLHHHCEGSKC*NQNLSSVCYTH
Trigger: GTGTGTGTAACAGACACTGGATAGGTTCTGATTGCAACACTTACTTCCCTCACAATGATGATGCAAAGACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000265727.11
ENST00000398201.8
ENST00000398203.8
ENST00000398204.8
ENST00000398209.7
ENST00000413139.2
ENST00000426930.5
ENST00000682337.1
ENST00000683525.1
ENST00000684002.1
CDS CAA 72 bp AGGGTGATCAATGGATTTTCAGATATGGCAAACTTGTaGTCAGTCGCCCAGGTTTCCATAGCAACCAATACT +
Preference number: 6 (lower is better)
Translates to: RVINGFSDMANL*SVAQVSIATNT
Trigger: AGTATTGGTTGCTATGGAAACCTGGGCGACTGACAACAAGTTTGCCATATCTGAAAATCCATTGATCACCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000265727.11
ENST00000398201.8
ENST00000398203.8
ENST00000398204.8
ENST00000398209.7
ENST00000413139.2
ENST00000439864.5
ENST00000682337.1
ENST00000683525.1
ENST00000684002.1
CDS CAA 72 bp ACTAAAATGGTGCCAGCAATTATGCCTATTATGATATaGGTGCCAGCAACACCATTGCCAGACAGAGTGATA +
Preference number: 6 (lower is better)
Translates to: TKMVPAIMPIMI*VPATPLPDRVI
Trigger: TATCACTCTGTCTGGCAATGGTGTTGCTGGCACCAATATCATAATAGGCATAATTGCTGGCACCATTTTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000265727.11
ENST00000398201.8
ENST00000398203.8
ENST00000398204.8
ENST00000398209.7
ENST00000413139.2
ENST00000426930.5
ENST00000682337.1
ENST00000683525.1
ENST00000684002.1
CDS TCA 72 bp GTGCCTTTTTCCATTAGAGGTTCAGACTTACTCAGTTaGATTAGACCGAGGTCTAAATCTTTTGCCTCTGAT +
Preference number: 6 (lower is better)
Translates to: VPFSIRGSDLLS*IRPRSKSFASD
Trigger: ATCAGAGGCAAAAGATTTAGACCTCGGTCTAATTCAACTGAGTAAGTCTGAACCTCTAATGGAAAAAGGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398201.8
ENST00000682337.1
ENST00000684002.1
CDS CAA 90 bp CGGAGACATGGTTTACAGTTCTTTGACTATCTGCTTAATTTACTTTaGACACTATTTGCACAGGACCTTGGAGTGCCTTTTTCCATTAGA +
Preference number: 6 (lower is better)
Translates to: RRHGLQFFDYLLNLL*TLFAQDLGVPFSIR
Trigger: TCTAATGGAAAAAGGCACTCCAAGGTCCTGTGCAAATAGTGTCAAAAGTAAATTAAGCAGATAGTCAAAGAACTGTAAACCATGTCTCCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000682337.1
ENST00000684002.1
CDS CAA 90 bp ATGGTATCACTTGAAATTGTCTACTGTGTCTATAAAGTATCCATGTaGACAAGCCACTTACAAGACAATACCATTCAGGTGGAAGGTCCA +
Preference number: 6 (lower is better)
Translates to: MVSLEIVYCVYKVSM*TSHLQDNTIQVEGP
Trigger: TGGACCTTCCACCTGAATGGTATTGTCTTGTAAGTGGCTTGTCAACATGGATACTTTATAGACACAGTAGACAATTTCAAGTGATACCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684002.1
CDS TCA 72 bp CCCTTCAATATTCAGTTTCTCATAGCAATATTTGTCTaGTGCTGTCACCTTTTGCCCCCAAATGTATTTGCA +
Preference number: 6 (lower is better)
Translates to: PFNIQFLIAIFV*CCHLLPPNVFA
Trigger: TGCAAATACATTTGGGGGCAAAAGGTGACAGCATCAGACAAATATTGCTATGAGAAACTGAATATTGAAGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000265727.11
ENST00000398201.8
ENST00000398203.8
ENST00000398204.8
ENST00000398209.7
ENST00000413139.2
ENST00000682337.1
ENST00000683525.1
ENST00000684002.1
CDS GCA 72 bp GAAACTTATTCCATTAGTCTGAGAGAATGCTTAGATTaGAGCCATGAAGACCTCATAGTGGTGGTTTTAGAT +
Preference number: 6 (lower is better)
Translates to: ETYSISLRECLD*SHEDLIVVVLD
Trigger: ATCTAAAACCACCACTATGAGGTCTTCATGGCTGCAATCTAAGCATTCTCTCAGACTAATGGAATAAGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684002.1
CDS GCA 72 bp TTTAAAAGGGAAACTTATTCCATTAGTCTGAGAGAATaGTTAGATTGCAGCCATGAAGACCTCATAGTGGTG +
Preference number: 6 (lower is better)
Translates to: FKRETYSISLRE*LDCSHEDLIVV
Trigger: CACCACTATGAGGTCTTCATGGCTGCAATCTAAGCATTCTCTCAGACTAATGGAATAAGTTTCCCTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684002.1
CDS CCA 72 bp AAAATACTCAGATGGCTGCAATTCCAATCTGGCATTTaGGCATACAACACCCTAAGAACAATTAAAAGGAAC +
Preference number: 6 (lower is better)
Translates to: KILRWLQFQSGI*AYNTLRTIKRN
Trigger: GTTCCTTTTAATTGTTCTTAGGGTGTTGTATGCCCAAATGCCAGATTGGAATTGCAGCCATCTGAGTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476330.1
CDS TCA 72 bp TTGAAATTGTCTACTGTGTCTATAAAGTATCCATGTTaGCAAGCCACTTACAAGACAATACCATTCAGGTGG +
Preference number: 6 (lower is better)
Translates to: LKLSTVSIKYPC*QATYKTIPFRW
Trigger: CCACCTGAATGGTATTGTCTTGTAAGTGGCTTGTCAACATGGATACTTTATAGACACAGTAGACAATTTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684002.1
CDS TCA 72 bp AAACCAAACAACATTCCAAGAAGAGTTTATCAACAATaGGCCCTAAAGCATCCAAGCGCTTTGGGAATATAT +
Preference number: 6 (lower is better)
Translates to: KPNNIPRRVYQQ*ALKHPSALGIY
Trigger: ATATATTCCCAAAGCGCTTGGATGCTTTAGGGCTCATTGTTGATAAACTCTTCTTGGAATGTTGTTTGGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684002.1
CDS CCA 72 bp TTGTCTGAGATAATACCAATATTATGGGCTAATGACTaGGCAAGTGTAACAGCCATTAAATCAGTTTTCCCA +
Preference number: 6 (lower is better)
Translates to: LSEIIPILWAND*ASVTAIKSVFP
Trigger: TGGGAAAACTGATTTAATGGCTGTTACACTTGCCCAGTCATTAGCCCATAATATTGGTATTATCTCAGACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000265727.11
ENST00000398201.8
ENST00000398203.8
ENST00000398204.8
ENST00000398209.7
ENST00000413139.2
ENST00000682337.1
ENST00000683525.1
ENST00000684002.1
CDS CAA 72 bp CTTGAAATTGTCTACTGTGTCTATAAAGTATCCATGTaGACAAGCCACTTACAAGACAATACCATTCAGGTG +
Preference number: 6 (lower is better)
Translates to: LEIVYCVYKVSM*TSHLQDNTIQV
Trigger: CACCTGAATGGTATTGTCTTGTAAGTGGCTTGTCAACATGGATACTTTATAGACACAGTAGACAATTTCAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684002.1
CDS CAA 72 bp TCTATGATGCCATTCTGGACCATGCAATGGTATCACTaGAAATTGTCTACTGTGTCTATAAAGTATCCATGT +
Preference number: 6 (lower is better)
Translates to: SMMPFWTMQWYH*KLSTVSIKYPC
Trigger: ACATGGATACTTTATAGACACAGTAGACAATTTCAAGTGATACCATTGCATGGTCCAGAATGGCATCATAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684002.1