RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADAM19 (Homo sapiens)

Ensembl gene IDs: ENSG00000135074

Ensembl transcript IDs: ENST00000257527.9, ENST00000517374.5, ENST00000517905.1, ENST00000517951.5, ENST00000519752.1

Found 786 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGACCCGGGCCCTGGGGAGTTCCTAGCAGCCCTGCTCAGGTGAGCTaGCAGTGGTGCAGGTGGGGACCCACCACGCAGATAATCTGGAGG +
Preference number: 1 (lower is better)
Translates to: RPGPWGVPSSPAQVS*QWCRWGPTTQIIWR
Trigger: CCTCCAGATTATCTGCGTGGTGGGTCCCCACCTGCACCACTGCCAGCTCACCTGAGCAGGGCTGCTAGGAACTCCCCAGGGCCCGGGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR CCA 90 bp AGGCCTCCTGGACGACTCCGTCCTCTCTATTTGAGACCCGGGCCCTaGGGAGTTCCTAGCAGCCCTGCTCAGGTGAGCTGGCAGTGGTGC +
Preference number: 1 (lower is better)
Translates to: RPPGRLRPLYLRPGP*GVPSSPAQVSWQWC
Trigger: GCACCACTGCCAGCTCACCTGAGCAGGGCTGCTAGGAACTCCCCAGGGCCCGGGTCTCAAATAGAGAGGACGGAGTCGTCCAGGAGGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR TCA 90 bp AGGGTCCCAGGAGCCAACAGCTTACACTGGTGGCAGCAGGAGCCGTaGGCACACTCCGCCCCCGGCCTCAGGGTACAATTAGAGGCATTG +
Preference number: 1 (lower is better)
Translates to: RVPGANSLHWWQQEP*AHSAPGLRVQLEAL
Trigger: CAATGCCTCTAATTGTACCCTGAGGCCGGGGGCGGAGTGTGCTCACGGCTCCTGCTGCCACCAGTGTAAGCTGTTGGCTCCTGGGACCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR GCA 90 bp GTGCCCTGCACCCCAGGAGTGAATGGATGGCTTCTGCAAGCGAAGTaGTGGCCTGAGGGGCTTGCTGGCCTTGAGCATCTCCATCAGCAC +
Preference number: 1 (lower is better)
Translates to: VPCTPGVNGWLLQAK*WPEGLAGLEHLHQH
Trigger: GTGCTGATGGAGATGCTCAAGGCCAGCAAGCCCCTCAGGCCAGCACTTCGCTTGCAGAAGCCATCCATTCACTCCTGGGGTGCAGGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR GCA 90 bp CAGCCCGGGACCTCTGAGGAGAGCAGAAGCAATGGGAAGCTCTCTTaGGTGCCCTGCACCCCAGGAGTGAATGGATGGCTTCTGCAAGCG +
Preference number: 1 (lower is better)
Translates to: QPGTSEESRSNGKLS*VPCTPGVNGWLLQA
Trigger: CGCTTGCAGAAGCCATCCATTCACTCCTGGGGTGCAGGGCACGCAAGAGAGCTTCCCATTGCTTCTGCTCTCCTCAGAGGTCCCGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR CCA 90 bp CCCTGCACCCCAGGAGTGAATGGATGGCTTCTGCAAGCGAAGTGCTaGCCTGAGGGGCTTGCTGGCCTTGAGCATCTCCATCAGCACCTC +
Preference number: 1 (lower is better)
Translates to: PCTPGVNGWLLQAKC*PEGLAGLEHLHQHL
Trigger: GAGGTGCTGATGGAGATGCTCAAGGCCAGCAAGCCCCTCAGGCCAGCACTTCGCTTGCAGAAGCCATCCATTCACTCCTGGGGTGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR TCA 90 bp GCAGAAGCAATGGGAAGCTCTCTTGCGTGCCCTGCACCCCAGGAGTaGATGGATGGCTTCTGCAAGCGAAGTGCTGGCCTGAGGGGCTTG +
Preference number: 1 (lower is better)
Translates to: AEAMGSSLACPAPQE*MDGFCKRSAGLRGL
Trigger: CAAGCCCCTCAGGCCAGCACTTCGCTTGCAGAAGCCATCCATTCACTCCTGGGGTGCAGGGCACGCAAGAGAGCTTCCCATTGCTTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR CCA 90 bp TGCTGCTGGCTGCCTTCTCCAGTGATCTCGGGCAGCTCCCAGAAATaGGTCTGTTCTCTGCTCAGAGGGCAACGGTCCAGCCCGAAGTCA +
Preference number: 1 (lower is better)
Translates to: CCWLPSPVISGSSQK*VCSLLRGQRSSPKS
Trigger: TGACTTCGGGCTGGACCGTTGCCCTCTGAGCAGAGAACAGACCCATTTCTGGGAGCTGCCCGAGATCACTGGAGAAGGCAGCCAGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR TCA 90 bp TCAATGGGCACCGCGTTGGACTCCAGGGGCCGGGCCTCAGAGCTCTaGCACTGGATCTTCCCACACTTCGCATCTCTCATGTTGCACTTC +
Preference number: 1 (lower is better)
Translates to: SMGTALDSRGRASEL*HWIFPHFASLMLHF
Trigger: GAAGTGCAACATGAGAGATGCGAAGTGTGGGAAGATCCAGTGTCAGAGCTCTGAGGCCCGGCCCCTGGAGTCCAACGCGGTGCCCATTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR GCA 90 bp GGCGGCCAGACATGCTTCTTCAGGGTTCCATGGCCATGGGTCCTCTaGAGTGTCCAGAGAGCTCAAGGAAAGGGAGAAGCCCCTTGGACA +
Preference number: 1 (lower is better)
Translates to: GGQTCFFRVPWPWVL*SVQRAQGKGEAPWT
Trigger: TGTCCAAGGGGCTTCTCCCTTTCCTTGAGCTCTCTGGACACTGCAGAGGACCCATGGCCATGGAACCCTGAAGAAGCATGTCTGGCCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR CCA 90 bp GAGCTCAGAGGCGGCCAGACATGCTTCTTCAGGGTTCCATGGCCATaGGTCCTCTGCAGTGTCCAGAGAGCTCAAGGAAAGGGAGAAGCC +
Preference number: 1 (lower is better)
Translates to: ELRGGQTCFFRVPWP*VLCSVQRAQGKGEA
Trigger: GGCTTCTCCCTTTCCTTGAGCTCTCTGGACACTGCAGAGGACCCATGGCCATGGAACCCTGAAGAAGCATGTCTGGCCGCCTCTGAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR CCA 90 bp GAGAGTCAGGCCAGCTCCTGTCCGGAGAGCCACCCAGCACCTTTGTaGAGTGGGAGTCTATCTCCCAGCAAACATCTCCAGGTGCTTTGC +
Preference number: 1 (lower is better)
Translates to: ESQASSCPESHPAPL*SGSLSPSKHLQVLC
Trigger: GCAAAGCACCTGGAGATGTTTGCTGGGAGATAGACTCCCACTCCACAAAGGTGCTGGGTGGCTCTCCGGACAGGAGCTGGCCTGACTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR TCA 90 bp AGGTGGGGAATGGATCTCCACAGCAAGGATGACCCACAGCAAGGATaGCCCACGGCAAGGACATGGGGAACCTGTATCACAGCCACCCTG +
Preference number: 1 (lower is better)
Translates to: RWGMDLHSKDDPQQG*PTARTWGTCITATL
Trigger: CAGGGTGGCTGTGATACAGGTTCCCCATGTCCTTGCCGTGGGTCATCCTTGCTGTGGGTCATCCTTGCTGTGGAGATCCATTCCCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR GCA 90 bp ACCTCTGAGGAGAGCAGAAGCAATGGGAAGCTCTCTTGCGTGCCCTaGACCCCAGGAGTGAATGGATGGCTTCTGCAAGCGAAGTGCTGG +
Preference number: 1 (lower is better)
Translates to: TSEESRSNGKLSCVP*TPGVNGWLLQAKCW
Trigger: CCAGCACTTCGCTTGCAGAAGCCATCCATTCACTCCTGGGGTGCAGGGCACGCAAGAGAGCTTCCCATTGCTTCTGCTCTCCTCAGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR GCA 90 bp CGACAACCCAGGTCTCTTTCTGGTGTGGTTCCAGGGAGGGTGGACTaGAGGTTCAGATGGCTCATGCAGTCACTATGGCTGTGGCGCTGT +
Preference number: 1 (lower is better)
Translates to: RQPRSLSGVVPGRVD*RFRWLMQSLWLWRC
Trigger: ACAGCGCCACAGCCATAGTGACTGCATGAGCCATCTGAACCTGCAGTCCACCCTCCCTGGAACCACACCAGAAAGAGACCTGGGTTGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR TCA 90 bp AGAGCCAGTGAGGGAAATCCAGTGGCCGACTGTGAGAGAGGACTCTaGCTTGTAGGTCACAAGCACCTGGTCACCCGAAGGTCAGGACTG +
Preference number: 1 (lower is better)
Translates to: RASEGNPVADCERGL*LVGHKHLVTRRSGL
Trigger: CAGTCCTGACCTTCGGGTGACCAGGTGCTTGTGACCTACAAGTCAGAGTCCTCTCTCACAGTCGGCCACTGGATTTCCCTCACTGGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR TCA 90 bp TATGACCCCAATGGCCATGCCCCAAGTCTACTCTGGTCACACTCCTaGGAGCCAGTGAGGGAAATCCAGTGGCCGACTGTGAGAGAGGAC +
Preference number: 1 (lower is better)
Translates to: YDPNGHAPSLLWSHS*EPVREIQWPTVRED
Trigger: GTCCTCTCTCACAGTCGGCCACTGGATTTCCCTCACTGGCTCTCAGGAGTGTGACCAGAGTAGACTTGGGGCATGGCCATTGGGGTCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR GCA 90 bp AACAGACTCAAGAGGGACTTGCTCAGGGTCCCTCCCCAGGTCAGGTaGAGGGGCAGGACTGAAGCCACCACAGCTCAGGATTCTAAGAAT +
Preference number: 1 (lower is better)
Translates to: NRLKRDLLRVPPQVR*RGRTEATTAQDSKN
Trigger: ATTCTTAGAATCCTGAGCTGTGGTGGCTTCAGTCCTGCCCCTGCACCTGACCTGGGGAGGGACCCTGAGCAAGTCCCTCTTGAGTCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517905.1
3UTR CCA 90 bp AATGTGGGCTTGGATTCTACAGAACCTCTCCTTCGCAGGCTCCCCTaGGGAAGGGGACCTTTCCAGTTGGCGTTCCCATGGCTTTCTTGG +
Preference number: 1 (lower is better)
Translates to: NVGLDSTEPLLRRLP*GRGPFQLAFPWLSW
Trigger: CCAAGAAAGCCATGGGAACGCCAACTGGAAAGGTCCCCTTCCCCAGGGGAGCCTGCGAAGGAGAGGTTCTGTAGAATCCAAGCCCACATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
3UTR CCA 90 bp GCAAATATGGTTGTAGCCACACTTGGTTCCAGTCATCACCAGCCCTaGGTCCAGCATGTCACCCTCCTCCTCAGGACCTCGGTAGACGTG +
Preference number: 1 (lower is better)
Translates to: ANMVVATLGSSHHQP*VQHVTLLLRTSVDV
Trigger: CACGTCTACCGAGGTCCTGAGGAGGAGGGTGACATGCTGGACCCAGGGCTGGTGATGACTGGAACCAAGTGTGGCTACAACCATATTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR TCA 90 bp CGGTGCTCCTCCTGCTGTCTACACTGCCTACGAATAGTACCTGTCTaGGTCAGAGTGACCCGTGTGAATACAGGGATGCAGGGGTTTGGG +
Preference number: 1 (lower is better)
Translates to: RCSSCCLHCLRIVPV*VRVTRVNTGMQGFG
Trigger: CCCAAACCCCTGCATCCCTGTATTCACACGGGTCACTCTGACTCAGACAGGTACTATTCGTAGGCAGTGTAGACAGCAGGAGGAGCACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR GCA 90 bp CTGGTGTGGTTCCAGGGAGGGTGGACTGCAGGTTCAGATGGCTCATaGAGTCACTATGGCTGTGGCGCTGTCATTTCAGAGCTATCTACC +
Preference number: 1 (lower is better)
Translates to: LVWFQGGWTAGSDGS*SHYGCGAVISELST
Trigger: GGTAGATAGCTCTGAAATGACAGCGCCACAGCCATAGTGACTGCATGAGCCATCTGAACCTGCAGTCCACCCTCCCTGGAACCACACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR CCA 90 bp GAAAACGACAACCCAGGTCTCTTTCTGGTGTGGTTCCAGGGAGGGTaGACTGCAGGTTCAGATGGCTCATGCAGTCACTATGGCTGTGGC +
Preference number: 1 (lower is better)
Translates to: ENDNPGLFLVWFQGG*TAGSDGSCSHYGCG
Trigger: GCCACAGCCATAGTGACTGCATGAGCCATCTGAACCTGCAGTCCACCCTCCCTGGAACCACACCAGAAAGAGACCTGGGTTGTCGTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR CCA 90 bp CTTCCAGATACCCGTTCCCACACCTCCGGCCTCCATACAACATCCTaGTGTCTGGCATGTTGGAGAGACACATTCCACCACCTGACTGCA +
Preference number: 1 (lower is better)
Translates to: LPDTRSHTSGLHTTS*CLACWRDTFHHLTA
Trigger: TGCAGTCAGGTGGTGGAATGTGTCTCTCCAACATGCCAGACACCAGGATGTTGTATGGAGGCCGGAGGTGTGGGAACGGGTATCTGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR TCA 90 bp CATTGCCCTGGATCCCAGACACATACAAACGCACAGTGGACGGTGTaGGAGGACGCGTTGGGGGTGACTTTGGAAATGTGGGCTTGGATT +
Preference number: 1 (lower is better)
Translates to: HCPGSQTHTNAQWTV*EDALGVTLEMWAWI
Trigger: AATCCAAGCCCACATTTCCAAAGTCACCCCCAACGCGTCCTCTCACACCGTCCACTGTGCGTTTGTATGTGTCTGGGATCCAGGGCAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
3UTR GCA 90 bp GTGTTCACCATTCATGTCCTTTCCACAGTTTCCAAAGGTGTCTCCTaGCACATTCACCTTCTCGAAGCAGAGGTCAGGGGCAGGTCGGGC +
Preference number: 1 (lower is better)
Translates to: VFTIHVLSTVSKGVS*HIHLLEAEVRGRSG
Trigger: GCCCGACCTGCCCCTGACCTCTGCTTCGAGAAGGTGAATGTGGCAGGAGACACCTTTGGAAACTGTGGAAAGGACATGAATGGTGAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR CCA 90 bp AGCCTCAGCCTTGCAGTGAGGTTTTCAAGAGCAAACAATTGCTCATaGCAGGATGGGAGGAGGCCCCAGGAAAGCCTCAGAGGAGTGAGA +
Preference number: 1 (lower is better)
Translates to: SLSLAVRFSRANNCS*QDGRRPQESLRGVR
Trigger: TCTCACTCCTCTGAGGCTTTCCTGGGGCCTCCTCCCATCCTGCCATGAGCAATTGTTTGCTCTTGAAAACCTCACTGCAAGGCTGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR CCA 90 bp TCTCTTTCTGGTGTGGTTCCAGGGAGGGTGGACTGCAGGTTCAGATaGCTCATGCAGTCACTATGGCTGTGGCGCTGTCATTTCAGAGCT +
Preference number: 1 (lower is better)
Translates to: SLSGVVPGRVDCRFR*LMQSLWLWRCHFRA
Trigger: AGCTCTGAAATGACAGCGCCACAGCCATAGTGACTGCATGAGCCATCTGAACCTGCAGTCCACCCTCCCTGGAACCACACCAGAAAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR CCA 90 bp AAGTACGAGGAGGGGCCAAGTGTACACAGCCTCCCGCAGGCCAGGTaGCTTCTACTAATGCACTTCCTTGCTCTTCACAACAACCTGATG +
Preference number: 1 (lower is better)
Translates to: KYEEGPSVHSLPQAR*LLLMHFLALHNNLM
Trigger: CATCAGGTTGTTGTGAAGAGCAAGGAAGTGCATTAGTAGAAGCCACCTGGCCTGCGGGAGGCTGTGTACACTTGGCCCCTCCTCGTACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
3UTR TCA 90 bp TCAGATCATAGTCCCTCTGGGCTTCCAAGGAAGCCGAGGAGGCACTaGGTCAACAGGGAGATTTTTGGAGATGTGGAGGTTCCTGGAGGA +
Preference number: 1 (lower is better)
Translates to: SDHSPSGLPRKPRRH*VNREIFGDVEVPGG
Trigger: TCCTCCAGGAACCTCCACATCTCCAAAAATCTCCCTGTTGACTCAGTGCCTCCTCGGCTTCCTTGGAAGCCCAGAGGGACTATGATCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR GCA 90 bp ACACAGCCTCCCGCAGGCCAGGTGGCTTCTACTAATGCACTTCCTTaGTCTTCACAACAACCTGATGGGGCTGGTACTACTGCTCATCAT +
Preference number: 1 (lower is better)
Translates to: TQPPAGQVASTNALP*SSQQPDGAGTTAHH
Trigger: ATGATGAGCAGTAGTACCAGCCCCATCAGGTTGTTGTGAAGAGCAAGGAAGTGCATTAGTAGAAGCCACCTGGCCTGCGGGAGGCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
3UTR CCA 90 bp AGGAGAAGCTGCCAGTCACCCTCCTCATACTCTCCCCTCCCTACCTaGGGCTGTATATTGCACAAAACAACACCTAGAGGCCATCAGATC +
Preference number: 1 (lower is better)
Translates to: RRSCQSPSSYSPLPT*GCILHKTTPRGHQI
Trigger: GATCTGATGGCCTCTAGGTGTTGTTTTGTGCAATATACAGCCCCAGGTAGGGAGGGGAGAGTATGAGGAGGGTGACTGGCAGCTTCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR CCA 90 bp TGGAAGGACATGCCCGTGATTAATTGGGCGTTGTCATGGTACTTCTaGGCAAGCAGCTTGCGCCTCCAACTGAGAAAGGACCAGAGGGTA +
Preference number: 1 (lower is better)
Translates to: WKDMPVINWALSWYF*ASSLRLQLRKDQRV
Trigger: TACCCTCTGGTCCTTTCTCAGTTGGAGGCGCAAGCTGCTTGCCCAGAAGTACCATGACAACGCCCAATTAATCACGGGCATGTCCTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR GCA 90 bp CACCTTTGTGGAGTGGGAGTCTATCTCCCAGCAAACATCTCCAGGTaGTTTGCAAAAACCGTCCTATCTAGCAAAGCACCACACGGCCCT +
Preference number: 1 (lower is better)
Translates to: HLCGVGVYLPANISR*FAKTVLSSKAPHGP
Trigger: AGGGCCGTGTGGTGCTTTGCTAGATAGGACGGTTTTTGCAAAGCACCTGGAGATGTTTGCTGGGAGATAGACTCCCACTCCACAAAGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR GCA 90 bp ATAAGGAGGCCCTGGGGTGGTGAATCAGAAGCTCAGCCTCAGCCTTaGAGTGAGGTTTTCAAGAGCAAACAATTGCTCATGGCAGGATGG +
Preference number: 1 (lower is better)
Translates to: IRRPWGGESEAQPQP*SEVFKSKQLLMAGW
Trigger: CCATCCTGCCATGAGCAATTGTTTGCTCTTGAAAACCTCACTGCAAGGCTGAGGCTGAGCTTCTGATTCACCACCCCAGGGCCTCCTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR GCA 90 bp ATCCTGGTGTCTGGCATGTTGGAGAGACACATTCCACCACCTGACTaGAGATACCTGTCCAGCTCCCTCCTGTTGCATCCATTGAACACT +
Preference number: 1 (lower is better)
Translates to: ILVSGMLERHIPPPD*RYLSSSLLLHPLNT
Trigger: AGTGTTCAATGGATGCAACAGGAGGGAGCTGGACAGGTATCTGCAGTCAGGTGGTGGAATGTGTCTCTCCAACATGCCAGACACCAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR CCA 90 bp CCCTGGGGAAGGGGACCTTTCCAGTTGGCGTTCCCATGGCTTTCTTaGGTGTCCAGCAGAGCTGTTATACACGTGGTTAACACAATTACT +
Preference number: 1 (lower is better)
Translates to: PWGRGPFQLAFPWLS*VSSRAVIHVVNTIT
Trigger: AGTAATTGTGTTAACCACGTGTATAACAGCTCTGCTGGACACCCAAGAAAGCCATGGGAACGCCAACTGGAAAGGTCCCCTTCCCCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR TCA 90 bp TGGCCAGTCTTCCTCCTGGGCAGCCTCCCTGAACAGAGCCAGGAGTaGAGCATTAGTAGAACTGGTTGCCGAAAGTCTATCAAATTCCAA +
Preference number: 1 (lower is better)
Translates to: WPVFLLGSLPEQSQE*SISRTGCRKSIKFQ
Trigger: TTGGAATTTGATAGACTTTCGGCAACCAGTTCTACTAATGCTTCACTCCTGGCTCTGTTCAGGGAGGCTGCCCAGGAGGAAGACTGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR CCA 90 bp GTAGCACATTTAAATAAAAGGTTGGGCCACAGGAAAGGTGGGGAATaGATCTCCACAGCAAGGATGACCCACAGCAAGGATGACCCACGG +
Preference number: 1 (lower is better)
Translates to: VAHLNKRLGHRKGGE*ISTARMTHSKDDPR
Trigger: CCGTGGGTCATCCTTGCTGTGGGTCATCCTTGCTGTGGAGATCCATTCCCCACCTTTCCTGTGGCCCAACCTTTTATTTAAATGTGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR CCA 90 bp CTAAGCAAACAACAGTTCCACTTGGCTGGGGAGCCCTCAGAATCATaGCAGGAGGCAAAAGGCACTTCTGGGAAACGATGCAATTTGGTG +
Preference number: 1 (lower is better)
Translates to: LSKQQFHLAGEPSES*QEAKGTSGKRCNLV
Trigger: CACCAAATTGCATCGTTTCCCAGAAGTGCCTTTTGCCTCCTGCCATGATTCTGAGGGCTCCCCAGCCAAGTGGAACTGTTGTTTGCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR CCA 90 bp AAGAATAAATTAGGAAGTAGGCAGGGAGAGACTTCCAATAAAGATTaGAAAGGCGTATTGCAGGAGGTGGGGAGGGGCTATTGCTTCAGG +
Preference number: 1 (lower is better)
Translates to: KNKLGSRQGETSNKD*KGVLQEVGRGYCFR
Trigger: CCTGAAGCAATAGCCCCTCCCCACCTCCTGCAATACGCCTTTCCAATCTTTATTGGAAGTCTCTCCCTGCCTACTTCCTAATTTATTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR CCA 90 bp CGTTCCCATGGCTTTCTTGGGTGTCCAGCAGAGCTGTTATACACGTaGTTAACACAATTACTGACTTTGGAACTGGTCCCCAGTTTTCAA +
Preference number: 1 (lower is better)
Translates to: RSHGFLGCPAELLYT*LTQLLTLELVPSFQ
Trigger: TTGAAAACTGGGGACCAGTTCCAAAGTCAGTAATTGTGTTAACCACGTGTATAACAGCTCTGCTGGACACCCAAGAAAGCCATGGGAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR CCA 90 bp CTCTCCCTTTTGCAATATTCCCTTTCCCCTTCTGCAATCGTGCTTTaGAATAAGGTCTCTCCTTCCCTAAGCCCAGATTTATTTGTATTT +
Preference number: 1 (lower is better)
Translates to: LSLLQYSLSPSAIVL*NKVSPSLSPDLFVF
Trigger: AAATACAAATAAATCTGGGCTTAGGGAAGGAGAGACCTTATTCCAAAGCACGATTGCAGAAGGGGAAAGGGAATATTGCAAAAGGGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR-3UTR CCA 90 bp CACCTTCTCGAAGCAGAGGTCAGGGGCAGGTCGGGCTCCGGGTCCCCACAGCTGGGGCCAGGCCGATGGTaGTGCCGTGGAAGGACATGC +
Preference number: 2 (lower is better)
Translates to: HLLEAEVRGRSGSGSPQLGPGRW*CRGRTC
Trigger: GCATGTCCTTCCACGGCACCACCATCGGCCTGGCCC...CAGCTGTGGGGACCCGGAGCCCGACCTGCCCCTGACCTCTGCTTCGAGAAGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR CAA 90 bp TGGCCGGCTTGGAGGAGGCCTCCTGGACGACTCCGTCCTCTCTATTaGAGACCCGGGCCCTGGGGAGTTCCTAGCAGCCCTGCTCAGGTG +
Preference number: 2 (lower is better)
Translates to: WPAWRRPPGRLRPLY*RPGPWGVPSSPAQV
Trigger: CACCTGAGCAGGGCTGCTAGGAACTCCCCAGGGCCCGGGTCTCAAATAGAGAGGACGGAGTCGTCCAGGAGGCCTCCTCCAAGCCGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR-3UTR TCA 90 bp CATCAGCATGAGGACCGCCAGCACCAAGATGGCCACCAACACTCCAGCTACCACTGGCAGCAGGAGCCGTaGGCACACTCCGCCCCCGGC +
Preference number: 2 (lower is better)
Translates to: HQHEDRQHQDGHQHSSYHWQQEP*AHSAPG
Trigger: GCCGGGGGCGGAGTGTGCTCACGGCTCCTGCTGCCA...GTGGTAGCTGGAGTGTTGGTGGCCATCTTGGTGCTGGCGGTCCTCATGCTGATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR-3UTR GCA 90 bp CACATTCACCTTCTCGAAGCAGAGGTCAGGGGCAGGTCGGGCTCCGGGTCCCCATCACACTGCCTGGCCTaGTCGCGGCACAGGGTCCCA +
Preference number: 2 (lower is better)
Translates to: HIHLLEAEVRGRSGSGSPSHCLA*SRHRVP
Trigger: TGGGACCCTGTGCCGCGAGCAGGCCAGGCAGTGTGA...TGGGGACCCGGAGCCCGACCTGCCCCTGACCTCTGCTTCGAGAAGGTGAATGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR-3UTR CCA 90 bp TGCCGTTGTAGCAGTAGGCCTGGCCGCCCTCACAGGGGGTACCATCCATCTGGTGGAGGTCACACTGCCTaGCCTGCTCGCGGCACAGGG +
Preference number: 2 (lower is better)
Translates to: CRCSSRPGRPHRGYHPSGGGHTA*PARGTG
Trigger: CCCTGTGCCGCGAGCAGGCCAGGCAGTGTGACCTCC...ACCAGATGGATGGTACCCCCTGTGAGGGCGGCCAGGCCTACTGCTACAACGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR-3UTR TCA 90 bp AGAAGTACGAGGAGGGGCCAAGTGTACACAGCCTCCCGCAGGCCAGGTGGCTTCGTGCAGGGGCAGGACTaGAGCCACCACAGCTCAGGA +
Preference number: 2 (lower is better)
Translates to: RSTRRGQVYTASRRPGGFVQGQD*SHHSSG
Trigger: TCCTGAGCTGTGGTGGCTTCAGTCCTGCCCCTGCAC...GAAGCCACCTGGCCTGCGGGAGGCTGTGTACACTTGGCCCCTCCTCGTACTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517905.1
3UTR-3UTR GCA 90 bp GAGGGGCCAAGTGTACACAGCCTCCCGCAGGCCAGGTGGCTTCTACTAATGCACCCTCCCCAGGTCAGGTaGAGGGGCAGGACTGAAGCC +
Preference number: 2 (lower is better)
Translates to: EGPSVHSLPQARWLLLMHPPQVR*RGRTEA
Trigger: GGCTTCAGTCCTGCCCCTGCACCTGACCTGGGGAGG...GTGCATTAGTAGAAGCCACCTGGCCTGCGGGAGGCTGTGTACACTTGGCCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000517905.1
3UTR-3UTR GCA 90 bp CACATTCACCTTCTCGAAGCAGAGGTCAGGGGCAGGTCGGGCTCCGGGTCCCCAGGCAGTGGGGAGACTTaGCCGTACAGAACTCCGGGA +
Preference number: 2 (lower is better)
Translates to: HIHLLEAEVRGRSGSGSPGSGET*PYRTPG
Trigger: TCCCGGAGTTCTGTACGGGCAAGTCTCCCCACTGCC...TGGGGACCCGGAGCCCGACCTGCCCCTGACCTCTGCTTCGAGAAGGTGAATGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR-3UTR GCA 90 bp CATCAGCATGAGGACCGCCAGCACCAAGATGGCCACCAACACTCCAGCTACCACCCAGGCCGATGGTGGTaGCGTGGAAGGACATGCCCG +
Preference number: 2 (lower is better)
Translates to: HQHEDRQHQDGHQHSSYHPGRWW*RGRTCP
Trigger: CGGGCATGTCCTTCCACGGCACCACCATCGGCCTGG...GTGGTAGCTGGAGTGTTGGTGGCCATCTTGGTGCTGGCGGTCCTCATGCTGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR-3UTR GCA 90 bp CTCGCGGCACAGGGTCCCAGGAGCCAACAGCTTACACTGGTGGCAGCAGGAGCCGGCCGAGCAGCAATCTaGAGAATCATGGGTCATGCC +
Preference number: 2 (lower is better)
Translates to: LAAQGPRSQQLTLVAAGAGRAAI*RIMGHA
Trigger: GGCATGACCCATGATTCTGCAGATTGCTGCTCGGCC...GGCTCCTGCTGCCACCAGTGTAAGCTGTTGGCTCCTGGGACCCTGTGCCGCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR CAA 90 bp GATGGCTTCTGCAAGCGAAGTGCTGGCCTGAGGGGCTTGCTGGCCTaGAGCATCTCCATCAGCACCTCGGGGCTAGGAGTCTGGAGGAGA +
Preference number: 2 (lower is better)
Translates to: DGFCKRSAGLRGLLA*SISISTSGLGVWRR
Trigger: TCTCCTCCAGACTCCTAGCCCCGAGGTGCTGATGGAGATGCTCAAGGCCAGCAAGCCCCTCAGGCCAGCACTTCGCTTGCAGAAGCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR-3UTR TCA 90 bp GAGGGTGGACTGCAGGTTCAGATGGCTCATGCAGTCACTATGGCTGTGGCGCTGGGGGCTTGCTGGCCTTaGGCATCTCCATCAGCACCT +
Preference number: 2 (lower is better)
Translates to: EGGLQVQMAHAVTMAVALGACWP*ASPSAP
Trigger: AGGTGCTGATGGAGATGCTCAAGGCCAGCAAGCCCC...CAGCGCCACAGCCATAGTGACTGCATGAGCCATCTGAACCTGCAGTCCACCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR-3UTR TCA 90 bp CCGGCACTGGATCTGCCTCCCATTCATGATGATAGTGGTGTCAATGGGCACCGCCAGTGGCAGCTGCCATaGTGCACCCACCATCAGCCG +
Preference number: 2 (lower is better)
Translates to: PALDLPPIHDDSGVNGHRQWQLP*CTHHQP
Trigger: CGGCTGATGGTGGGTGCATCATGGCAGCTGCCACTG...GCGGTGCCCATTGACACCACTATCATCATGAATGGGAGGCAGATCCAGTGCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR-3UTR CCA 90 bp CCACATTCACCTTCTCGAAGCAGAGGTCAGGGGCAGGTCGGGCTCCGGGTCCCCAATTGGGCGTTGTCATaGTACTTCTGGGCAAGCAGC +
Preference number: 2 (lower is better)
Translates to: PHSPSRSRGQGQVGLRVPNWALS*YFWASS
Trigger: GCTGCTTGCCCAGAAGTACCATGACAACGCCCAATT...GGGGACCCGGAGCCCGACCTGCCCCTGACCTCTGCTTCGAGAAGGTGAATGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR-3UTR CCA 90 bp TGGGAGGGCTTCCGCAGGATTTCCGGAGTGTTGATCACCTTTCGCTTGCCCTGGTCGATACTGCCCCCGTaGCCCGGTGTGTTGCAGAAG +
Preference number: 2 (lower is better)
Translates to: WEGFRRISGVLITFRLPWSILPP*PGVLQK
Trigger: CTTCTGCAACACACCGGGCCACGGGGGCAGTATCGA...CCAGGGCAAGCGAAAGGTGATCAACACTCCGGAAATCCTGCGGAAGCCCTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR-3UTR TCA 90 bp CAGCATGAGGACCGCCAGCACCAAGATGGCCACCAACACTCCAGCTACCACAGGCGGAGTGGTCCATGTTaGCTCCTCCAGACTGGTACA +
Preference number: 2 (lower is better)
Translates to: QHEDRQHQDGHQHSSYHRRSGPC*LLQTGT
Trigger: TGTACCAGTCTGGAGGAGTCAACATGGACCACTCCG...CCTGTGGTAGCTGGAGTGTTGGTGGCCATCTTGGTGCTGGCGGTCCTCATGCTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR-3UTR GCA 90 bp GAGGGTGGACTGCAGGTTCAGATGGCTCATGCAGTCACTATGGCTGTGGCGCTGCTGTTCCAGTGCAGCTaGTGCTGGCTGCCTTCTCCA +
Preference number: 2 (lower is better)
Translates to: EGGLQVQMAHAVTMAVALLFQCS*CWLPSP
Trigger: TGGAGAAGGCAGCCAGCAGCAGCTGCACTGGAACAG...CAGCGCCACAGCCATAGTGACTGCATGAGCCATCTGAACCTGCAGTCCACCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR-3UTR CCA 90 bp TGGGAGGGCTTCCGCAGGATTTCCGGAGTGTTGATCACCTTTCGCTTGCCCTGGCCGATGGTGGTGCCGTaGAAGGACATGCCCGTGATT +
Preference number: 2 (lower is better)
Translates to: WEGFRRISGVLITFRLPWPMVVP*KDMPVI
Trigger: AATCACGGGCATGTCCTTCCACGGCACCACCATCGG...CCAGGGCAAGCGAAAGGTGATCAACACTCCGGAAATCCTGCGGAAGCCCTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR-3UTR CCA 90 bp CCGGCACTGGATCTGCCTCCCATTCATGATGATAGTGGTGTCAATGGGCACCGCTCTCGTGGGCCATGGTaGCAGCCACGCCAATGGCAT +
Preference number: 2 (lower is better)
Translates to: PALDLPPIHDDSGVNGHRSRGPW*QPRQWH
Trigger: ATGCCATTGGCGTGGCTGCCACCATGGCCCACGAGA...GCGGTGCCCATTGACACCACTATCATCATGAATGGGAGGCAGATCCAGTGCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR-3UTR CCA 90 bp AGTCCCGCTGTTCTGAGAAACCCTGAAGGGACAACTGAACTGTTGCCTCAGCTTCAATGGGCACCGCGTTaGACTCCAGGGGCCGGGCCT +
Preference number: 2 (lower is better)
Translates to: SPAVLRNPEGTTELLPQLQWAPR*TPGAGP
Trigger: AGGCCCGGCCCCTGGAGTCCAACGCGGTGCCCATTG...AAGCTGAGGCAACAGTTCAGTTGTCCCTTCAGGGTTTCTCAGAACAGCGGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR CAA 90 bp AGTGAGAGTCAGGCCAGCTCCTGTCCGGAGAGCCACCCAGCACCTTaGTGGAGTGGGAGTCTATCTCCCAGCAAACATCTCCAGGTGCTT +
Preference number: 2 (lower is better)
Translates to: SESQASSCPESHPAP*WSGSLSPSKHLQVL
Trigger: AAGCACCTGGAGATGTTTGCTGGGAGATAGACTCCCACTCCACAAAGGTGCTGGGTGGCTCTCCGGACAGGAGCTGGCCTGACTCTCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR-3UTR TCA 90 bp TCTCCAGGTGCTTTGCAAAAACCGTCCTATCTAGCAAAGCACCACACGGCCCTCCCAGCCCGGGACCTCTaGGGAGAGCAGAAGCAATGG +
Preference number: 2 (lower is better)
Translates to: SPGALQKPSYLAKHHTALPARDL*GEQKQW
Trigger: CCATTGCTTCTGCTCTCCTCAGAGGTCCCGGGCTGG...GAGGGCCGTGTGGTGCTTTGCTAGATAGGACGGTTTTTGCAAAGCACCTGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR-3UTR TCA 90 bp GAGGGTGGACTGCAGGTTCAGATGGCTCATGCAGTCACTATGGCTGTGGCGCTGGAAGGTCAGGACTGCTaGGGGTTTGCTCACCAAAGC +
Preference number: 2 (lower is better)
Translates to: EGGLQVQMAHAVTMAVALEGQDC*GFAHQS
Trigger: GCTTTGGTGAGCAAACCCTCAGCAGTCCTGACCTTC...CAGCGCCACAGCCATAGTGACTGCATGAGCCATCTGAACCTGCAGTCCACCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR-3UTR GCA 90 bp AGTCCCGCTGTTCTGAGAAACCCTGAAGGGACAACTGAACTGTTGCCTCAGCTTGCCCACTGTCGATACTaGCCCCGTGGCCCGGTGTGT +
Preference number: 2 (lower is better)
Translates to: SPAVLRNPEGTTELLPQLAHCRY*PRGPVC
Trigger: ACACACCGGGCCACGGGGGCAGTATCGACAGTGGGC...AAGCTGAGGCAACAGTTCAGTTGTCCCTTCAGGGTTTCTCAGAACAGCGGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR-3UTR CCA 90 bp TCTCCAGGTGCTTTGCAAAAACCGTCCTATCTAGCAAAGCACCACACGGCCCTCCTGCAAGCGAAGTGCTaGCCTGAGGGGCTTGCTGGC +
Preference number: 2 (lower is better)
Translates to: SPGALQKPSYLAKHHTALLQAKC*PEGLAG
Trigger: GCCAGCAAGCCCCTCAGGCCAGCACTTCGCTTGCAG...GAGGGCCGTGTGGTGCTTTGCTAGATAGGACGGTTTTTGCAAAGCACCTGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR-3UTR CCA 90 bp CCGGCACTGGATCTGCCTCCCATTCATGATGATAGTGGTGTCAATGGGCACCGCTGGCAGCCACGCCAATaGCATTCTCGGAGTGGTCCA +
Preference number: 2 (lower is better)
Translates to: PALDLPPIHDDSGVNGHRWQPRQ*HSRSGP
Trigger: TGGACCACTCCGAGAATGCCATTGGCGTGGCTGCCA...GCGGTGCCCATTGACACCACTATCATCATGAATGGGAGGCAGATCCAGTGCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR-3UTR CCA 90 bp CTCGCGGCACAGGGTCCCAGGAGCCAACAGCTTACACTGGTGGCAGCAGGAGCCCAATCTGCAGAATCATaGGTCATGCCAAAGTTGTGG +
Preference number: 2 (lower is better)
Translates to: LAAQGPRSQQLTLVAAGAQSAES*VMPKLW
Trigger: CCACAACTTTGGCATGACCCATGATTCTGCAGATTG...GGCTCCTGCTGCCACCAGTGTAAGCTGTTGGCTCCTGGGACCCTGTGCCGCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR-3UTR GCA 90 bp TATCTAGCAAAGCACCACACGGCCCTCCTTCCCTGCTGCAGGGAAGACAGGAGCGGACTGCTGAGGGTTTaGTCACCAAAGCACCACACA +
Preference number: 2 (lower is better)
Translates to: YLAKHHTALLPCCREDRSGLLRV*SPKHHT
Trigger: TGTGTGGTGCTTTGGTGAGCAAACCCTCAGCAGTCC...GCTCCTGTCTTCCCTGCAGCAGGGAAGGAGGGCCGTGTGGTGCTTTGCTAGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR-3UTR GCA 90 bp TGGGAGGGCTTCCGCAGGATTTCCGGAGTGTTGATCACCTTTCGCTTGCCCTGGCCCCGGCACTGGATCTaGCTCCCATTCATGATGATA +
Preference number: 2 (lower is better)
Translates to: WEGFRRISGVLITFRLPWPRHWI*LPFMMI
Trigger: TATCATCATGAATGGGAGGCAGATCCAGTGCCGGGG...CCAGGGCAAGCGAAAGGTGATCAACACTCCGGAAATCCTGCGGAAGCCCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR-3UTR CCA 90 bp TATCTAGCAAAGCACCACACGGCCCTCCTTCCCTGCTGCAGGGAAGACAGGAGCCACCCCAGGAGTGAATaGATGGCTTCTGCAAGCGAA +
Preference number: 2 (lower is better)
Translates to: YLAKHHTALLPCCREDRSHPRSE*MASASE
Trigger: TTCGCTTGCAGAAGCCATCCATTCACTCCTGGGGTG...GCTCCTGTCTTCCCTGCAGCAGGGAAGGAGGGCCGTGTGGTGCTTTGCTAGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR-3UTR CCA 90 bp CGCACAGTGGACGGTGTGAGAGGACGCGTTGGGGGTGACTTTGGAAATGTGGGCAGCACCTTTGTGGAGTaGGAGTCTATCTCCCAGCAA +
Preference number: 2 (lower is better)
Translates to: RTVDGVRGRVGGDFGNVGSTFVE*ESISQQ
Trigger: TTGCTGGGAGATAGACTCCCACTCCACAAAGGTGCT...GCCCACATTTCCAAAGTCACCCCCAACGCGTCCTCTCACACCGTCCACTGTGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR-3UTR CCA 90 bp CGCACAGTGGACGGTGTGAGAGGACGCGTTGGGGGTGACTTTGGAAATGTGGGCTTCCCATGGCTTTCTTaGGTGTCCAGCAGAGCTGTT +
Preference number: 2 (lower is better)
Translates to: RTVDGVRGRVGGDFGNVGFPWLS*VSSRAV
Trigger: AACAGCTCTGCTGGACACCCAAGAAAGCCATGGGAA...GCCCACATTTCCAAAGTCACCCCCAACGCGTCCTCTCACACCGTCCACTGTGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
3UTR CAA 90 bp GAAGCTCAGCCTCAGCCTTGCAGTGAGGTTTTCAAGAGCAAACAATaGCTCATGGCAGGATGGGAGGAGGCCCCAGGAAAGCCTCAGAGG +
Preference number: 2 (lower is better)
Translates to: EAQPQPCSEVFKSKQ*LMAGWEEAPGKPQR
Trigger: CCTCTGAGGCTTTCCTGGGGCCTCCTCCCATCCTGCCATGAGCAATTGTTTGCTCTTGAAAACCTCACTGCAAGGCTGAGGCTGAGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR-3UTR GCA 90 bp AAGTCAATGACCAGCCTGCTCCCTCGTGTGTACTTTGTAAATAGCTGGGCTCCCGCCCGGTGCTCCTCCTaGTGTCTACACTGCCTACGA +
Preference number: 2 (lower is better)
Translates to: KSMTSLLPRVYFVNSWAPARCSS*CLHCLR
Trigger: TCGTAGGCAGTGTAGACAGCAGGAGGAGCACCGGGC...GGGAGCCCAGCTATTTACAAAGTACACACGAGGGAGCAGGCTGGTCATTGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR-3UTR CCA 90 bp GACTGCAGGTTCAGATGGCTCATGCAGTCACTATGGCTGTGGCGCTGTCATTTCCAGTGCAGCTGCTGCTaGCTGCCTTCTCCAGTGATC +
Preference number: 2 (lower is better)
Translates to: DCRFRWLMQSLWLWRCHFQCSCC*LPSPVI
Trigger: GATCACTGGAGAAGGCAGCCAGCAGCAGCTGCACTG...GAAATGACAGCGCCACAGCCATAGTGACTGCATGAGCCATCTGAACCTGCAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR-3UTR CCA 90 bp TCGCTTGCCCTGGGGCGTCTGCAGCTTGAAAGTTGGGTTGGCATGACCAGTCCCCAACATCCTGGTGTCTaGCATGTTGGAGAGACACAT +
Preference number: 2 (lower is better)
Translates to: SLALGRLQLESWVGMTSPQHPGV*HVGETH
Trigger: ATGTGTCTCTCCAACATGCCAGACACCAGGATGTTG...GGGACTGGTCATGCCAACCCAACTTTCAAGCTGCAGACGCCCCAGGGCAAGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR CAA 90 bp AGGTCACAAGCACCTGGTCACCCGAAGGTCAGGACTGCTGAGGGTTaGCTCACCAAAGCACCACACATTAGAGGGAGAATGAGAGGGGAA +
Preference number: 2 (lower is better)
Translates to: RSQAPGHPKVRTAEG*LTKAPHIRGRMRGE
Trigger: TTCCCCTCTCATTCTCCCTCTAATGTGTGGTGCTTTGGTGAGCAAACCCTCAGCAGTCCTGACCTTCGGGTGACCAGGTGCTTGTGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR-3UTR TCA 90 bp GACTGCAGGTTCAGATGGCTCATGCAGTCACTATGGCTGTGGCGCTGTCATTTCCTCTGGTCACACTCCTaGGAGCCAGTGAGGGAAATC +
Preference number: 2 (lower is better)
Translates to: DCRFRWLMQSLWLWRCHFLWSHS*EPVREI
Trigger: GATTTCCCTCACTGGCTCTCAGGAGTGTGACCAGAG...GAAATGACAGCGCCACAGCCATAGTGACTGCATGAGCCATCTGAACCTGCAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR-3UTR TCA 90 bp GACTGCAGGTTCAGATGGCTCATGCAGTCACTATGGCTGTGGCGCTGTCATTTCGACAAAAAGCTGGGTTaGGGAAGAGGCTCCCTGCTC +
Preference number: 2 (lower is better)
Translates to: DCRFRWLMQSLWLWRCHFDKKLG*GRGSLL
Trigger: GAGCAGGGAGCCTCTTCCTCAACCCAGCTTTTTGTC...GAAATGACAGCGCCACAGCCATAGTGACTGCATGAGCCATCTGAACCTGCAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR-3UTR GCA 90 bp AAGTCAATGACCAGCCTGCTCCCTCGTGTGTACTTTGTAAATAGCTGGGCTCCCCTTCTGCAAGCGAAGTaGTGGCCTGAGGGGCTTGCT +
Preference number: 2 (lower is better)
Translates to: KSMTSLLPRVYFVNSWAPLLQAK*WPEGLA
Trigger: AGCAAGCCCCTCAGGCCAGCACTTCGCTTGCAGAAG...GGGAGCCCAGCTATTTACAAAGTACACACGAGGGAGCAGGCTGGTCATTGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR-3UTR GCA 90 bp AAGTCAATGACCAGCCTGCTCCCTCGTGTGTACTTTGTAAATAGCTGGGCTCCCAATGGGAAGCTCTCTTaGGTGCCCTGCACCCCAGGA +
Preference number: 2 (lower is better)
Translates to: KSMTSLLPRVYFVNSWAPNGKLS*VPCTPG
Trigger: TCCTGGGGTGCAGGGCACGCAAGAGAGCTTCCCATT...GGGAGCCCAGCTATTTACAAAGTACACACGAGGGAGCAGGCTGGTCATTGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR-3UTR CCA 90 bp TGGGAGGGCTTCCGCAGGATTTCCGGAGTGTTGATCACCTTTCGCTTGCCCTGGCTCCATACAACATCCTaGTGTCTGGCATGTTGGAGA +
Preference number: 2 (lower is better)
Translates to: WEGFRRISGVLITFRLPWLHTTS*CLACWR
Trigger: TCTCCAACATGCCAGACACCAGGATGTTGTATGGAG...CCAGGGCAAGCGAAAGGTGATCAACACTCCGGAAATCCTGCGGAAGCCCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR-3UTR TCA 90 bp AGAAGGAGGTGTTCCTGCACTGCCCCTCAAAGCAAATATGGTTGTAGCCACACTACTGCTCCTGGTAGGTaGGGCACATGCCGTTGTAGC +
Preference number: 2 (lower is better)
Translates to: RRRCSCTAPQSKYGCSHTTAPGR*GTCRCS
Trigger: GCTACAACGGCATGTGCCTCACCTACCAGGAGCAGT...AGTGTGGCTACAACCATATTTGCTTTGAGGGGCAGTGCAGGAACACCTCCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR-3UTR CCA 90 bp GACAGGGCACTAAATCCCTTGAGGTTTGTTTTAGAGATGGCTCCAAGGCCCTTAAGGTGGGAGGGGACGTaGCTTGTCACATGCAGCCAT +
Preference number: 2 (lower is better)
Translates to: DRALNPLRFVLEMAPRPLRWEGT*LVTCSH
Trigger: ATGGCTGCATGTGACAAGCCACGTCCCCTCCCACCT...TAAGGGCCTTGGAGCCATCTCTAAAACAAACCTCAAGGGATTTAGTGCCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR CAA 90 bp TTTGTGGAGTGGGAGTCTATCTCCCAGCAAACATCTCCAGGTGCTTaGCAAAAACCGTCCTATCTAGCAAAGCACCACACGGCCCTCCTT +
Preference number: 2 (lower is better)
Translates to: FVEWESISQQTSPGA*QKPSYLAKHHTALL
Trigger: AAGGAGGGCCGTGTGGTGCTTTGCTAGATAGGACGGTTTTTGCAAAGCACCTGGAGATGTTTGCTGGGAGATAGACTCCCACTCCACAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR CAA 90 bp CCCGTGATTAATTGGGCGTTGTCATGGTACTTCTGGGCAAGCAGCTaGCGCCTCCAACTGAGAAAGGACCAGAGGGTAGAATATGGATTC +
Preference number: 2 (lower is better)
Translates to: PVINWALSWYFWASS*RLQLRKDQRVEYGF
Trigger: GAATCCATATTCTACCCTCTGGTCCTTTCTCAGTTGGAGGCGCAAGCTGCTTGCCCAGAAGTACCATGACAACGCCCAATTAATCACGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR-3UTR GCA 90 bp TCTCCAGGTGCTTTGCAAAAACCGTCCTATCTAGCAAAGCACCACACGGCCCTCTCCTGCTGTCTACACTaGCTACGAATAGTACCTGTC +
Preference number: 2 (lower is better)
Translates to: SPGALQKPSYLAKHHTALSCCLH*LRIVPV
Trigger: GACAGGTACTATTCGTAGGCAGTGTAGACAGCAGGA...GAGGGCCGTGTGGTGCTTTGCTAGATAGGACGGTTTTTGCAAAGCACCTGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR-3UTR GCA 90 bp GACCTTAAGATCTGCAAGTGTCTCAGAGCTGGGGCAGAAAAAGGCTTTACTTTTGAAGCCCAAGCCCGGTaGTCCTCCTGCTGTCTACAC +
Preference number: 2 (lower is better)
Translates to: DLKICKCLRAGAEKGFTFEAQAR*SSCCLH
Trigger: GTGTAGACAGCAGGAGGAGCACCGGGCTTGGGCTTC...AAAAGTAAAGCCTTTTTCTGCCCCAGCTCTGAGACACTTGCAGATCTTAAGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR-3UTR TCA 90 bp AAGATTTACCTACATCCCCATCTGCACAAAGAGCTTGCTAACTCACTAACCCAAACTCCTGAGAGCCAGTaGGGGAAATCCAGTGGCCGA +
Preference number: 2 (lower is better)
Translates to: KIYLHPHLHKELANSLTQTPESQ*GKSSGR
Trigger: TCGGCCACTGGATTTCCCTCACTGGCTCTCAGGAGT...TTGGGTTAGTGAGTTAGCAAGCTCTTTGTGCAGATGGGGATGTAGGTAAATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR-3UTR TCA 90 bp AGAAGGAGGTGTTCCTGCACTGCCCCTCAAAGCAAATATGGTTGTAGCCACACTTCCTGTTGCATCCATTaGACACTTTGGGAAAGGGGT +
Preference number: 2 (lower is better)
Translates to: RRRCSCTAPQSKYGCSHTSCCIH*TLWERG
Trigger: ACCCCTTTCCCAAAGTGTTCAATGGATGCAACAGGA...AGTGTGGCTACAACCATATTTGCTTTGAGGGGCAGTGCAGGAACACCTCCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR-3UTR CCA 90 bp TCTTCCCACACTTCGCATCTCTCATGTTGCACTTCCTGTGTTCACCATTCATGTTTGTCATGGTACTTCTaGGCAAGCAGCTTGCGCCTC +
Preference number: 2 (lower is better)
Translates to: SSHTSHLSCCTSCVHHSCLSWYF*ASSLRL
Trigger: GAGGCGCAAGCTGCTTGCCCAGAAGTACCATGACAA...ACATGAATGGTGAACACAGGAAGTGCAACATGAGAGATGCGAAGTGTGGGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR-3UTR CCA 90 bp CAAACTAGTAAAACCAGCAACTTGGTCTTGATTCCTGGTTCTATTCTAATCCTCACCACGCAGATAATCTaGAGGGGGCCGGGGAGGAGG +
Preference number: 2 (lower is better)
Translates to: QTSKTSNLVLIPGSILILTTQII*RGPGRR
Trigger: CCTCCTCCCCGGCCCCCTCCAGATTATCTGCGTGGT...GAGGATTAGAATAGAACCAGGAATCAAGACCAAGTTGCTGGTTTTACTAGTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR-3UTR GCA 90 bp ACTTATTTCCAAACCCAAGAACATCCAAGAAGCACCTATTGTGTGCAGAGAACTTTCCAGTGCAGCTGCTaGTGGCTGCCTTCTCCAGTG +
Preference number: 2 (lower is better)
Translates to: TYFQTQEHPRSTYCVQRTFQCSC*WLPSPV
Trigger: CACTGGAGAAGGCAGCCAGCAGCAGCTGCACTGGAA...AGTTCTCTGCACACAATAGGTGCTTCTTGGATGTTCTTGGGTTTGGAAATAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR-3UTR GCA 90 bp CCTTCAGTTTCAAAGAAGGAGGTGTTCCTGCACTGCCCCTCAAAGCAAATATGGCAGAATCATGGGTCATaGCAAAGTTGTGGCCCATCT +
Preference number: 2 (lower is better)
Translates to: PSVSKKEVFLHCPSKQIWQNHGS*QSCGPS
Trigger: AGATGGGCCACAACTTTGGCATGACCCATGATTCTG...CCATATTTGCTTTGAGGGGCAGTGCAGGAACACCTCCTTCTTTGAAACTGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR-3UTR CCA 90 bp GACCTTAAGATCTGCAAGTGTCTCAGAGCTGGGGCAGAAAAAGGCTTTACTTTTAAGCTCTGTGAGGCATaGGGTTGGGTTTTGAGGATG +
Preference number: 2 (lower is better)
Translates to: DLKICKCLRAGAEKGFTFKLCEA*GWVLRM
Trigger: CATCCTCAAAACCCAACCCCATGCCTCACAGAGCTT...AAAAGTAAAGCCTTTTTCTGCCCCAGCTCTGAGACACTTGCAGATCTTAAGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR-3UTR TCA 90 bp AAGATTTACCTACATCCCCATCTGCACAAAGAGCTTGCTAACTCACTAACCCAATGTGAGAGAGGACTCTaGCTTGTAGGTCACAAGCAC +
Preference number: 2 (lower is better)
Translates to: KIYLHPHLHKELANSLTQCERGL*LVGHKH
Trigger: GTGCTTGTGACCTACAAGTCAGAGTCCTCTCTCACA...TTGGGTTAGTGAGTTAGCAAGCTCTTTGTGCAGATGGGGATGTAGGTAAATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR-3UTR TCA 90 bp CAAACTAGTAAAACCAGCAACTTGGTCTTGATTCCTGGTTCTATTCTAATCCTCAGTAGTACATCAGCATaGGGACCGCCAGCACCAAGA +
Preference number: 2 (lower is better)
Translates to: QTSKTSNLVLIPGSILILSSTSA*GPPAPR
Trigger: TCTTGGTGCTGGCGGTCCTCATGCTGATGTACTACT...GAGGATTAGAATAGAACCAGGAATCAAGACCAAGTTGCTGGTTTTACTAGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR-3UTR GCA 90 bp TTCCAAACTAGTAAAACCAGCAACTTGGTCTTGATTCCTGGTTCTATTCTAATCTTGCCCTGGGGCGTCTaGAGCTTGAAAGTTGGGTTG +
Preference number: 2 (lower is better)
Translates to: FQTSKTSNLVLIPGSILILPWGV*SLKVGL
Trigger: CAACCCAACTTTCAAGCTGCAGACGCCCCAGGGCAA...GATTAGAATAGAACCAGGAATCAAGACCAAGTTGCTGGTTTTACTAGTTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR-3UTR CCA 90 bp AAAAAGAAAATTCACATTGCCCTGGATCCCAGACACATACAAACGCACAGTGGACAACAGGGAGATTTTTaGAGATGTGGAGGTTCCTGG +
Preference number: 2 (lower is better)
Translates to: KKKIHIALDPRHIQTHSGQQGDF*RCGGSW
Trigger: CCAGGAACCTCCACATCTCCAAAAATCTCCCTGTTG...TCCACTGTGCGTTTGTATGTGTCTGGGATCCAGGGCAATGTGAATTTTCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR-3UTR CCA 90 bp TTCCAAACTAGTAAAACCAGCAACTTGGTCTTGATTCCTGGTTCTATTCTAATCACTGTTGCCTCAGCTTaGAAGGGAGAGCTGAGGGCT +
Preference number: 2 (lower is better)
Translates to: FQTSKTSNLVLIPGSILITVASA*KGELRA
Trigger: AGCCCTCAGCTCTCCCTTCCAAGCTGAGGCAACAGT...GATTAGAATAGAACCAGGAATCAAGACCAAGTTGCTGGTTTTACTAGTTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR CAA 90 bp TGTCCAGCAGAGCTGTTATACACGTGGTTAACACAATTACTGACTTaGGAACTGGTCCCCAGTTTTCAAATTGCAAGTCTTCCATACCCT +
Preference number: 2 (lower is better)
Translates to: CPAELLYTWLTQLLT*ELVPSFQIASLPYP
Trigger: AGGGTATGGAAGACTTGCAATTTGAAAACTGGGGACCAGTTCCAAAGTCAGTAATTGTGTTAACCACGTGTATAACAGCTCTGCTGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR-3UTR GCA 90 bp AAAGTCTATCAAATTCCAAAACATTCCACCATCTTCCAGTTCACAGTACAACTTTGGCCATGGGTCCTCTaGAGTGTCCAGAGAGCTCAA +
Preference number: 2 (lower is better)
Translates to: KVYQIPKHSTIFQFTVQLWPWVL*SVQRAQ
Trigger: TTGAGCTCTCTGGACACTGCAGAGGACCCATGGCCA...AAGTTGTACTGTGAACTGGAAGATGGTGGAATGTTTTGGAATTTGATAGACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR-3UTR GCA 90 bp TTCCAAACTAGTAAAACCAGCAACTTGGTCTTGATTCCTGGTTCTATTCTAATCGAGGTGTTCCTGCACTaGCCCTCAAAGCAAATATGG +
Preference number: 2 (lower is better)
Translates to: FQTSKTSNLVLIPGSILIEVFLH*PSKQIW
Trigger: CCATATTTGCTTTGAGGGGCAGTGCAGGAACACCTC...GATTAGAATAGAACCAGGAATCAAGACCAAGTTGCTGGTTTTACTAGTTTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR CCA 72 bp AGCAGCCCTGCTCAGGTGAGCTGGCAGTGGTGCAGGTaGGGACCCACCACGCAGATAATCTGGAGGGGGCCG +
Preference number: 3 (lower is better)
Translates to: SSPAQVSWQWCR*GPTTQIIWRGP
Trigger: CGGCCCCCTCCAGATTATCTGCGTGGTGGGTCCCCACCTGCACCACTGCCAGCTCACCTGAGCAGGGCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR GCA 72 bp CCCGTACAGAACTCCGGGAGGTCACACTGCCTGGCCTaGTCGCGGCACAGGGTCCCAGGAGCCAACAGCTTA +
Preference number: 3 (lower is better)
Translates to: PVQNSGRSHCLA*SRHRVPGANSL
Trigger: TAAGCTGTTGGCTCCTGGGACCCTGTGCCGCGAGCAGGCCAGGCAGTGTGACCTCCCGGAGTTCTGTACGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR CCA 72 bp CCCTGGGGAGTTCCTAGCAGCCCTGCTCAGGTGAGCTaGCAGTGGTGCAGGTGGGGACCCACCACGCAGATA +
Preference number: 3 (lower is better)
Translates to: PWGVPSSPAQVS*QWCRWGPTTQI
Trigger: TATCTGCGTGGTGGGTCCCCACCTGCACCACTGCCAGCTCACCTGAGCAGGGCTGCTAGGAACTCCCCAGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR GCA 72 bp TATCTAGCAAAGCACCACACGGCCCTCCTTCCCTGCTaGAGGGAAGACAGGAGCCACCGCAGACCCCCTCAC +
Preference number: 3 (lower is better)
Translates to: YLAKHHTALLPC*REDRSHRRPPH
Trigger: GTGAGGGGGTCTGCGGTGGCTCCTGTCTTCCCTGCAGCAGGGAAGGAGGGCCGTGTGGTGCTTTGCTAGATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR GCA 72 bp TCCTATCTAGCAAAGCACCACACGGCCCTCCTTCCCTaGTGCAGGGAAGACAGGAGCCACCGCAGACCCCCT +
Preference number: 3 (lower is better)
Translates to: SYLAKHHTALLP*CREDRSHRRPP
Trigger: AGGGGGTCTGCGGTGGCTCCTGTCTTCCCTGCAGCAGGGAAGGAGGGCCGTGTGGTGCTTTGCTAGATAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR CCA 72 bp GGAGTTCCTAGCAGCCCTGCTCAGGTGAGCTGGCAGTaGTGCAGGTGGGGACCCACCACGCAGATAATCTGG +
Preference number: 3 (lower is better)
Translates to: GVPSSPAQVSWQ*CRWGPTTQIIW
Trigger: CCAGATTATCTGCGTGGTGGGTCCCCACCTGCACCACTGCCAGCTCACCTGAGCAGGGCTGCTAGGAACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR TCA 72 bp ACCGCGTTGGACTCCAGGGGCCGGGCCTCAGAGCTCTaGCACTGGATCTTCCCACACTTCGCATCTCTCATG +
Preference number: 3 (lower is better)
Translates to: TALDSRGRASEL*HWIFPHFASLM
Trigger: CATGAGAGATGCGAAGTGTGGGAAGATCCAGTGTCAGAGCTCTGAGGCCCGGCCCCTGGAGTCCAACGCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR-3UTR CAA 90 bp CCCAGAAATGGGTCTGTTCTCTGCTCAGAGGGCAACGGTCCAGCCCGAAGTCAACAATGGGAAGCTCTCTaGCGTGCCCTGCACCCCAGG +
Preference number: 3 (lower is better)
Translates to: PRNGSVLCSEGNGPARSQQWEAL*RALHPR
Trigger: CCTGGGGTGCAGGGCACGCAAGAGAGCTTCCCATTG...TTGACTTCGGGCTGGACCGTTGCCCTCTGAGCAGAGAACAGACCCATTTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR TCA 72 bp ATGGGAAGCTCTCTTGCGTGCCCTGCACCCCAGGAGTaGATGGATGGCTTCTGCAAGCGAAGTGCTGGCCTG +
Preference number: 3 (lower is better)
Translates to: MGSSLACPAPQE*MDGFCKRSAGL
Trigger: CAGGCCAGCACTTCGCTTGCAGAAGCCATCCATTCACTCCTGGGGTGCAGGGCACGCAAGAGAGCTTCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR GCA 72 bp ACCCCAGGAGTGAATGGATGGCTTCTGCAAGCGAAGTaGTGGCCTGAGGGGCTTGCTGGCCTTGAGCATCTC +
Preference number: 3 (lower is better)
Translates to: TPGVNGWLLQAK*WPEGLAGLEHL
Trigger: GAGATGCTCAAGGCCAGCAAGCCCCTCAGGCCAGCACTTCGCTTGCAGAAGCCATCCATTCACTCCTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR CCA 72 bp GCCAGCTCCTGTCCGGAGAGCCACCCAGCACCTTTGTaGAGTGGGAGTCTATCTCCCAGCAAACATCTCCAG +
Preference number: 3 (lower is better)
Translates to: ASSCPESHPAPL*SGSLSPSKHLQ
Trigger: CTGGAGATGTTTGCTGGGAGATAGACTCCCACTCCACAAAGGTGCTGGGTGGCTCTCCGGACAGGAGCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR-3UTR CAA 90 bp AAGGGGTGCCCAGTGGCAGCTGCCATGATGCACCCACCATCAGCCGCACTGGCCGTGATTAATTGGGCGTaGTCATGGTACTTCTGGGCA +
Preference number: 3 (lower is better)
Translates to: KGCPVAAAMMHPPSAALAVINWA*SWYFWA
Trigger: TGCCCAGAAGTACCATGACAACGCCCAATTAATCAC...GGCCAGTGCGGCTGATGGTGGGTGCATCATGGCAGCTGCCACTGGGCACCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR-3UTR CAA 90 bp GAGGGTGGACTGCAGGTTCAGATGGCTCATGCAGTCACTATGGCTGTGGCGCTGAGGACTGCTGAGGGTTaGCTCACCAAAGCACCACAC +
Preference number: 3 (lower is better)
Translates to: EGGLQVQMAHAVTMAVALRTAEG*LTKAPH
Trigger: GTGTGGTGCTTTGGTGAGCAAACCCTCAGCAGTCCT...CAGCGCCACAGCCATAGTGACTGCATGAGCCATCTGAACCTGCAGTCCACCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR-3UTR CAA 90 bp TGCCGTTGTAGCAGTAGGCCTGGCCGCCCTCACAGGGGGTACCATCCATCTGGTCTCCTGTTGCATCCATaGAACACTTTGGGAAAGGGG +
Preference number: 3 (lower is better)
Translates to: CRCSSRPGRPHRGYHPSGLLLHP*NTLGKG
Trigger: CCCCTTTCCCAAAGTGTTCAATGGATGCAACAGGAG...ACCAGATGGATGGTACCCCCTGTGAGGGCGGCCAGGCCTACTGCTACAACGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR-3UTR CAA 90 bp CTCGCGGCACAGGGTCCCAGGAGCCAACAGCTTACACTGGTGGCAGCAGGAGCCGTACAATTAGAGGCATaGCAGCAGGGGTTGTTACAT +
Preference number: 3 (lower is better)
Translates to: LAAQGPRSQQLTLVAAGAVQLEA*QQGLLH
Trigger: ATGTAACAACCCCTGCTGCAATGCCTCTAATTGTAC...GGCTCCTGCTGCCACCAGTGTAAGCTGTTGGCTCCTGGGACCCTGTGCCGCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR TCA 72 bp CGCAGACCCCCTCACCTGCTCAGAGCTCTCTTTCTGTaGGGGTCAGGTAAGGGCAGTGACCAGAGAGAGAAC +
Preference number: 3 (lower is better)
Translates to: RRPPHLLRALFL*GSGKGSDQREN
Trigger: GTTCTCTCTCTGGTCACTGCCCTTACCTGACCCTCACAGAAAGAGAGCTCTGAGCAGGTGAGGGGGTCTGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR CCA 72 bp GGCGGCCAGACATGCTTCTTCAGGGTTCCATGGCCATaGGTCCTCTGCAGTGTCCAGAGAGCTCAAGGAAAG +
Preference number: 3 (lower is better)
Translates to: GGQTCFFRVPWP*VLCSVQRAQGK
Trigger: CTTTCCTTGAGCTCTCTGGACACTGCAGAGGACCCATGGCCATGGAACCCTGAAGAAGCATGTCTGGCCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR CCA 72 bp CCAGGAGTGAATGGATGGCTTCTGCAAGCGAAGTGCTaGCCTGAGGGGCTTGCTGGCCTTGAGCATCTCCAT +
Preference number: 3 (lower is better)
Translates to: PGVNGWLLQAKC*PEGLAGLEHLH
Trigger: ATGGAGATGCTCAAGGCCAGCAAGCCCCTCAGGCCAGCACTTCGCTTGCAGAAGCCATCCATTCACTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR CCA 72 bp CTCCTGTCCGGAGAGCCACCCAGCACCTTTGTGGAGTaGGAGTCTATCTCCCAGCAAACATCTCCAGGTGCT +
Preference number: 3 (lower is better)
Translates to: LLSGEPPSTFVE*ESISQQTSPGA
Trigger: AGCACCTGGAGATGTTTGCTGGGAGATAGACTCCCACTCCACAAAGGTGCTGGGTGGCTCTCCGGACAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR CCA 72 bp GGTGTGGTTCCAGGGAGGGTGGACTGCAGGTTCAGATaGCTCATGCAGTCACTATGGCTGTGGCGCTGTCAT +
Preference number: 3 (lower is better)
Translates to: GVVPGRVDCRFR*LMQSLWLWRCH
Trigger: ATGACAGCGCCACAGCCATAGTGACTGCATGAGCCATCTGAACCTGCAGTCCACCCTCCCTGGAACCACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR CCA 72 bp TTGGATTCTACAGAACCTCTCCTTCGCAGGCTCCCCTaGGGAAGGGGACCTTTCCAGTTGGCGTTCCCATGG +
Preference number: 3 (lower is better)
Translates to: LDSTEPLLRRLP*GRGPFQLAFPW
Trigger: CCATGGGAACGCCAACTGGAAAGGTCCCCTTCCCCAGGGGAGCCTGCGAAGGAGAGGTTCTGTAGAATCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
3UTR-3UTR CAA 90 bp AGAAGGAGGTGTTCCTGCACTGCCCCTCAAAGCAAATATGGTTGTAGCCACACTGGGCAGTGGGGAGACTaGCCCGTACAGAACTCCGGG +
Preference number: 3 (lower is better)
Translates to: RRRCSCTAPQSKYGCSHTGQWGD*PVQNSG
Trigger: CCCGGAGTTCTGTACGGGCAAGTCTCCCCACTGCCC...AGTGTGGCTACAACCATATTTGCTTTGAGGGGCAGTGCAGGAACACCTCCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR TCA 72 bp GAGGGAAATCCAGTGGCCGACTGTGAGAGAGGACTCTaGCTTGTAGGTCACAAGCACCTGGTCACCCGAAGG +
Preference number: 3 (lower is better)
Translates to: EGNPVADCERGL*LVGHKHLVTRR
Trigger: CCTTCGGGTGACCAGGTGCTTGTGACCTACAAGTCAGAGTCCTCTCTCACAGTCGGCCACTGGATTTCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR TCA 72 bp AATGGCCATGCCCCAAGTCTACTCTGGTCACACTCCTaGGAGCCAGTGAGGGAAATCCAGTGGCCGACTGTG +
Preference number: 3 (lower is better)
Translates to: NGHAPSLLWSHS*EPVREIQWPTV
Trigger: CACAGTCGGCCACTGGATTTCCCTCACTGGCTCTCAGGAGTGTGACCAGAGTAGACTTGGGGCATGGCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR TCA 72 bp GCAGATACCTGTCCAGCTCCCTCCTGTTGCATCCATTaGACACTTTGGGAAAGGGGTGCCCAGTGGCAGCTG +
Preference number: 3 (lower is better)
Translates to: ADTCPAPSCCIH*TLWERGAQWQL
Trigger: CAGCTGCCACTGGGCACCCCTTTCCCAAAGTGTTCAATGGATGCAACAGGAGGGAGCTGGACAGGTATCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR CCA 72 bp CCCTGGGGAAGGGGACCTTTCCAGTTGGCGTTCCCATaGCTTTCTTGGGTGTCCAGCAGAGCTGTTATACAC +
Preference number: 3 (lower is better)
Translates to: PWGRGPFQLAFP*LSWVSSRAVIH
Trigger: GTGTATAACAGCTCTGCTGGACACCCAAGAAAGCCATGGGAACGCCAACTGGAAAGGTCCCCTTCCCCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
3UTR CCA 72 bp GAGGACGCGTTGGGGGTGACTTTGGAAATGTGGGCTTaGATTCTACAGAACCTCTCCTTCGCAGGCTCCCCT +
Preference number: 3 (lower is better)
Translates to: EDALGVTLEMWA*ILQNLSFAGSP
Trigger: AGGGGAGCCTGCGAAGGAGAGGTTCTGTAGAATCCAAGCCCACATTTCCAAAGTCACCCCCAACGCGTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
3UTR CCA 72 bp GAGGGGCCAAGTGTACACAGCCTCCCGCAGGCCAGGTaGCTTCTACTAATGCACTTCCTTGCTCTTCACAAC +
Preference number: 3 (lower is better)
Translates to: EGPSVHSLPQAR*LLLMHFLALHN
Trigger: GTTGTGAAGAGCAAGGAAGTGCATTAGTAGAAGCCACCTGGCCTGCGGGAGGCTGTGTACACTTGGCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
3UTR CCA 72 bp CTTTCGCTTGCCCTGGGGCGTCTGCAGCTTGAAAGTTaGGTTGGCATGACCAGTCCCGCTGTTCTGAGAAAC +
Preference number: 3 (lower is better)
Translates to: LSLALGRLQLES*VGMTSPAVLRN
Trigger: GTTTCTCAGAACAGCGGGACTGGTCATGCCAACCCAACTTTCAAGCTGCAGACGCCCCAGGGCAAGCGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR TCA 72 bp GGATCCCAGACACATACAAACGCACAGTGGACGGTGTaGGAGGACGCGTTGGGGGTGACTTTGGAAATGTGG +
Preference number: 3 (lower is better)
Translates to: GSQTHTNAQWTV*EDALGVTLEMW
Trigger: CCACATTTCCAAAGTCACCCCCAACGCGTCCTCTCACACCGTCCACTGTGCGTTTGTATGTGTCTGGGATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
3UTR GCA 72 bp TTCCAGGGAGGGTGGACTGCAGGTTCAGATGGCTCATaGAGTCACTATGGCTGTGGCGCTGTCATTTCAGAG +
Preference number: 3 (lower is better)
Translates to: FQGGWTAGSDGS*SHYGCGAVISE
Trigger: CTCTGAAATGACAGCGCCACAGCCATAGTGACTGCATGAGCCATCTGAACCTGCAGTCCACCCTCCCTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR-3UTR CAA 90 bp TGGGAGGGCTTCCGCAGGATTTCCGGAGTGTTGATCACCTTTCGCTTGCCCTGGTTGAGTTGGCCTAGTTaGTTGTTCTGTCTGCAGCAG +
Preference number: 3 (lower is better)
Translates to: WEGFRRISGVLITFRLPWLSWPS*LFCLQQ
Trigger: CTGCTGCAGACAGAACAACAAACTAGGCCAACTCAA...CCAGGGCAAGCGAAAGGTGATCAACACTCCGGAAATCCTGCGGAAGCCCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR TCA 72 bp AGTCCCTCTGGGCTTCCAAGGAAGCCGAGGAGGCACTaGGTCAACAGGGAGATTTTTGGAGATGTGGAGGTT +
Preference number: 3 (lower is better)
Translates to: SPSGLPRKPRRH*VNREIFGDVEV
Trigger: AACCTCCACATCTCCAAAAATCTCCCTGTTGACTCAGTGCCTCCTCGGCTTCCTTGGAAGCCCAGAGGGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR TCA 72 bp GGCTGTGGCGCTGTCATTTCAGAGCTATCTACCTCCTaGTGTGAGGGAGAAAGGCTGGAGAAGCCACAGGAA +
Preference number: 3 (lower is better)
Translates to: GCGAVISELSTS*CEGERLEKPQE
Trigger: TTCCTGTGGCTTCTCCAGCCTTTCTCCCTCACATCAGGAGGTAGATAGCTCTGAAATGACAGCGCCACAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR GCA 72 bp CCCGCAGGCCAGGTGGCTTCTACTAATGCACTTCCTTaGTCTTCACAACAACCTGATGGGGCTGGTACTACT +
Preference number: 3 (lower is better)
Translates to: PAGQVASTNALP*SSQQPDGAGTT
Trigger: AGTAGTACCAGCCCCATCAGGTTGTTGTGAAGAGCAAGGAAGTGCATTAGTAGAAGCCACCTGGCCTGCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
3UTR CCA 72 bp AGCACCTATTGTGTGCAGAGAACTATAAGGAGGCCCTaGGGTGGTGAATCAGAAGCTCAGCCTCAGCCTTGC +
Preference number: 3 (lower is better)
Translates to: STYCVQRTIRRP*GGESEAQPQPC
Trigger: GCAAGGCTGAGGCTGAGCTTCTGATTCACCACCCCAGGGCCTCCTTATAGTTCTCTGCACACAATAGGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR CCA 72 bp AACCCAGGTCTCTTTCTGGTGTGGTTCCAGGGAGGGTaGACTGCAGGTTCAGATGGCTCATGCAGTCACTAT +
Preference number: 3 (lower is better)
Translates to: NPGLFLVWFQGG*TAGSDGSCSHY
Trigger: ATAGTGACTGCATGAGCCATCTGAACCTGCAGTCCACCCTCCCTGGAACCACACCAGAAAGAGACCTGGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR CCA 72 bp AAGCAAGAAAACGACAACCCAGGTCTCTTTCTGGTGTaGTTCCAGGGAGGGTGGACTGCAGGTTCAGATGGC +
Preference number: 3 (lower is better)
Translates to: KQENDNPGLFLV*FQGGWTAGSDG
Trigger: GCCATCTGAACCTGCAGTCCACCCTCCCTGGAACCACACCAGAAAGAGACCTGGGTTGTCGTTTTCTTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR-3UTR CAA 90 bp TATCTAGCAAAGCACCACACGGCCCTCCTTCCCTGCTGCAGGGAAGACAGGAGCACCTGGGGCTGTATATaGCACAAAACAACACCTAGA +
Preference number: 3 (lower is better)
Translates to: YLAKHHTALLPCCREDRSTWGCI*HKTTPR
Trigger: TCTAGGTGTTGTTTTGTGCAATATACAGCCCCAGGT...GCTCCTGTCTTCCCTGCAGCAGGGAAGGAGGGCCGTGTGGTGCTTTGCTAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR-3UTR CAA 90 bp ACCATCCATCTGGTAGAAGTTGGTAGGGCAGTGGGGAGACTTGCCCGTACAGAACATCCATTGAACACTTaGGGAAAGGGGTGCCCAGTG +
Preference number: 3 (lower is better)
Translates to: TIHLVEVGRAVGRLARTEHPLNT*GKGCPV
Trigger: CACTGGGCACCCCTTTCCCAAAGTGTTCAATGGATG...TTCTGTACGGGCAAGTCTCCCCACTGCCCTACCAACTTCTACCAGATGGATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR TCA 72 bp TTCCTCCTGGGCAGCCTCCCTGAACAGAGCCAGGAGTaGAGCATTAGTAGAACTGGTTGCCGAAAGTCTATC +
Preference number: 3 (lower is better)
Translates to: FLLGSLPEQSQE*SISRTGCRKSI
Trigger: GATAGACTTTCGGCAACCAGTTCTACTAATGCTTCACTCCTGGCTCTGTTCAGGGAGGCTGCCCAGGAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR TCA 72 bp GTTTGTTGTTCTGTCTGCAGCAGTAGTACATCAGCATaGGGACCGCCAGCACCAAGATGGCCACCAACACTC +
Preference number: 3 (lower is better)
Translates to: VCCSVCSSSTSA*GPPAPRWPPTL
Trigger: GAGTGTTGGTGGCCATCTTGGTGCTGGCGGTCCTCATGCTGATGTACTACTGCTGCAGACAGAACAACAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR TCA 72 bp ACTGTTGCCTCAGCTTGGAAGGGAGAGCTGAGGGCTTaGGTTGGCCTAGTTTGTTGTTCTGTCTGCAGCAGT +
Preference number: 3 (lower is better)
Translates to: TVASAWKGELRA*VGLVCCSVCSS
Trigger: ACTGCTGCAGACAGAACAACAAACTAGGCCAACTCAAGCCCTCAGCTCTCCCTTCCAAGCTGAGGCAACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR CCA 72 bp CTTGCAGTGAGGTTTTCAAGAGCAAACAATTGCTCATaGCAGGATGGGAGGAGGCCCCAGGAAAGCCTCAGA +
Preference number: 3 (lower is better)
Translates to: LAVRFSRANNCS*QDGRRPQESLR
Trigger: TCTGAGGCTTTCCTGGGGCCTCCTCCCATCCTGCCATGAGCAATTGTTTGCTCTTGAAAACCTCACTGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR CCA 72 bp AGGGGACCTTTCCAGTTGGCGTTCCCATGGCTTTCTTaGGTGTCCAGCAGAGCTGTTATACACGTGGTTAAC +
Preference number: 3 (lower is better)
Translates to: RGPFQLAFPWLS*VSSRAVIHVVN
Trigger: GTTAACCACGTGTATAACAGCTCTGCTGGACACCCAAGAAAGCCATGGGAACGCCAACTGGAAAGGTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
3UTR CCA 72 bp ATGCCCGTGATTAATTGGGCGTTGTCATGGTACTTCTaGGCAAGCAGCTTGCGCCTCCAACTGAGAAAGGAC +
Preference number: 3 (lower is better)
Translates to: MPVINWALSWYF*ASSLRLQLRKD
Trigger: GTCCTTTCTCAGTTGGAGGCGCAAGCTGCTTGCCCAGAAGTACCATGACAACGCCCAATTAATCACGGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR-3UTR CAA 90 bp GACAGGGCACTAAATCCCTTGAGGTTTGTTTTAGAGATGGCTCCAAGGCCCTTATCCAGGAACCAAGCCTaGAGGCAGAGGGTAGCACAT +
Preference number: 3 (lower is better)
Translates to: DRALNPLRFVLEMAPRPLSRNQA*RQRVAH
Trigger: ATGTGCTACCCTCTGCCTCAAGGCTTGGTTCCTGGA...TAAGGGCCTTGGAGCCATCTCTAAAACAAACCTCAAGGGATTTAGTGCCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR-3UTR CAA 90 bp AGTCCCGCTGTTCTGAGAAACCCTGAAGGGACAACTGAACTGTTGCCTCAGCTTTCCAGCTCCCTCCTGTaGCATCCATTGAACACTTTG +
Preference number: 3 (lower is better)
Translates to: SPAVLRNPEGTTELLPQLSSSLL*HPLNTL
Trigger: CAAAGTGTTCAATGGATGCAACAGGAGGGAGCTGGA...AAGCTGAGGCAACAGTTCAGTTGTCCCTTCAGGGTTTCTCAGAACAGCGGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR TCA 72 bp TCCTGCTGTCTACACTGCCTACGAATAGTACCTGTCTaGGTCAGAGTGACCCGTGTGAATACAGGGATGCAG +
Preference number: 3 (lower is better)
Translates to: SCCLHCLRIVPV*VRVTRVNTGMQ
Trigger: CTGCATCCCTGTATTCACACGGGTCACTCTGACTCAGACAGGTACTATTCGTAGGCAGTGTAGACAGCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR GCA 72 bp CCCTGGGGTGGTGAATCAGAAGCTCAGCCTCAGCCTTaGAGTGAGGTTTTCAAGAGCAAACAATTGCTCATG +
Preference number: 3 (lower is better)
Translates to: PWGGESEAQPQP*SEVFKSKQLLM
Trigger: CATGAGCAATTGTTTGCTCTTGAAAACCTCACTGCAAGGCTGAGGCTGAGCTTCTGATTCACCACCCCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR CCA 72 bp TGCAGGTTCAGATGGCTCATGCAGTCACTATGGCTGTaGCGCTGTCATTTCAGAGCTATCTACCTCCTGATG +
Preference number: 3 (lower is better)
Translates to: CRFRWLMQSLWL*RCHFRAIYLLM
Trigger: CATCAGGAGGTAGATAGCTCTGAAATGACAGCGCCACAGCCATAGTGACTGCATGAGCCATCTGAACCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR CCA 72 bp ACAAAAAGCAAGAAAACGACAACCCAGGTCTCTTTCTaGTGTGGTTCCAGGGAGGGTGGACTGCAGGTTCAG +
Preference number: 3 (lower is better)
Translates to: TKSKKTTTQVSF*CGSREGGLQVQ
Trigger: CTGAACCTGCAGTCCACCCTCCCTGGAACCACACCAGAAAGAGACCTGGGTTGTCGTTTTCTTGCTTTTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR GCA 72 bp GGAGTGGGAGTCTATCTCCCAGCAAACATCTCCAGGTaGTTTGCAAAAACCGTCCTATCTAGCAAAGCACCA +
Preference number: 3 (lower is better)
Translates to: GVGVYLPANISR*FAKTVLSSKAP
Trigger: TGGTGCTTTGCTAGATAGGACGGTTTTTGCAAAGCACCTGGAGATGTTTGCTGGGAGATAGACTCCCACTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR CCA 72 bp TTAGGAAGTAGGCAGGGAGAGACTTCCAATAAAGATTaGAAAGGCGTATTGCAGGAGGTGGGGAGGGGCTAT +
Preference number: 3 (lower is better)
Translates to: LGSRQGETSNKD*KGVLQEVGRGY
Trigger: ATAGCCCCTCCCCACCTCCTGCAATACGCCTTTCCAATCTTTATTGGAAGTCTCTCCCTGCCTACTTCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR-3UTR CAA 90 bp GACCTTAAGATCTGCAAGTGTCTCAGAGCTGGGGCAGAAAAAGGCTTTACTTTTAGCCACCCAGCACCTTaGTGGAGTGGGAGTCTATCT +
Preference number: 3 (lower is better)
Translates to: DLKICKCLRAGAEKGFTFSHPAP*WSGSLS
Trigger: AGATAGACTCCCACTCCACAAAGGTGCTGGGTGGCT...AAAAGTAAAGCCTTTTTCTGCCCCAGCTCTGAGACACTTGCAGATCTTAAGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR CCA 72 bp GGCTTTCTTGGGTGTCCAGCAGAGCTGTTATACACGTaGTTAACACAATTACTGACTTTGGAACTGGTCCCC +
Preference number: 3 (lower is better)
Translates to: GFLGCPAELLYT*LTQLLTLELVP
Trigger: GGGGACCAGTTCCAAAGTCAGTAATTGTGTTAACCACGTGTATAACAGCTCTGCTGGACACCCAAGAAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR CCA 72 bp AAACTAATTACTAAGCAAACAACAGTTCCACTTGGCTaGGGAGCCCTCAGAATCATGGCAGGAGGCAAAAGG +
Preference number: 3 (lower is better)
Translates to: KLITKQTTVPLG*GALRIMAGGKR
Trigger: CCTTTTGCCTCCTGCCATGATTCTGAGGGCTCCCCAGCCAAGTGGAACTGTTGTTTGCTTAGTAATTAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR-3UTR CAA 90 bp AAAGTCTATCAAATTCCAAAACATTCCACCATCTTCCAGTTCACAGTACAACTTAGGGGCTTGCTGGCCTaGAGCATCTCCATCAGCACC +
Preference number: 3 (lower is better)
Translates to: KVYQIPKHSTIFQFTVQLRGLLA*SISIST
Trigger: GGTGCTGATGGAGATGCTCAAGGCCAGCAAGCCCCT...AAGTTGTACTGTGAACTGGAAGATGGTGGAATGTTTTGGAATTTGATAGACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR-3UTR CAA 90 bp TTCCAAACTAGTAAAACCAGCAACTTGGTCTTGATTCCTGGTTCTATTCTAATCCAGACCCCATGGCCATaGCACTTCTTCCCACAGCCT +
Preference number: 3 (lower is better)
Translates to: FQTSKTSNLVLIPGSILIQTPWP*HFFPQP
Trigger: AGGCTGTGGGAAGAAGTGCAATGGCCATGGGGTCTG...GATTAGAATAGAACCAGGAATCAAGACCAAGTTGCTGGTTTTACTAGTTTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR-3UTR CAA 90 bp AAAGTCTATCAAATTCCAAAACATTCCACCATCTTCCAGTTCACAGTACAACTTCAGGAGTCGCAACCTTaGGCATCACGGCTCAGAGGA +
Preference number: 3 (lower is better)
Translates to: KVYQIPKHSTIFQFTVQLQESQP*ASRLRG
Trigger: TCCTCTGAGCCGTGATGCCAAAGGTTGCGACTCCTG...AAGTTGTACTGTGAACTGGAAGATGGTGGAATGTTTTGGAATTTGATAGACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR-3UTR CAA 90 bp TTCCAAACTAGTAAAACCAGCAACTTGGTCTTGATTCCTGGTTCTATTCTAATCTCGGAGTGGTCCATGTaGACTCCTCCAGACTGGTAC +
Preference number: 3 (lower is better)
Translates to: FQTSKTSNLVLIPGSILISEWSM*TPPDWY
Trigger: GTACCAGTCTGGAGGAGTCAACATGGACCACTCCGA...GATTAGAATAGAACCAGGAATCAAGACCAAGTTGCTGGTTTTACTAGTTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR CCA 72 bp TTGCAATATTCCCTTTCCCCTTCTGCAATCGTGCTTTaGAATAAGGTCTCTCCTTCCCTAAGCCCAGATTTA +
Preference number: 3 (lower is better)
Translates to: LQYSLSPSAIVL*NKVSPSLSPDL
Trigger: TAAATCTGGGCTTAGGGAAGGAGAGACCTTATTCCAAAGCACGATTGCAGAAGGGGAAAGGGAATATTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR-3UTR CAA 90 bp GACCTTAAGATCTGCAAGTGTCTCAGAGCTGGGGCAGAAAAAGGCTTTACTTTTTCCAAGAAGCACCTATaGTGTGCAGAGAACTATAAG +
Preference number: 3 (lower is better)
Translates to: DLKICKCLRAGAEKGFTFSKKHL*CAENYK
Trigger: CTTATAGTTCTCTGCACACAATAGGTGCTTCTTGGA...AAAAGTAAAGCCTTTTTCTGCCCCAGCTCTGAGACACTTGCAGATCTTAAGGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR TCA 72 bp AAAGGCTTTACTTTTATAGGGAGAAGTCAGCAAGGCTaGAAGGAATCTATGGCTAGCAGGCAGTTACAAGAT +
Preference number: 3 (lower is better)
Translates to: KGFTFIGRSQQG*KESMASRQLQD
Trigger: ATCTTGTAACTGCCTGCTAGCCATAGATTCCTTTCAGCCTTGCTGACTTCTCCCTATAAAAGTAAAGCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR TCA 90 bp CACCTTCTCGAAGCAGAGGTCAGGGGCAGGTCGGGCTCCGGGTCCCCACAGCTGTGGCAGCAGGAGCCGTaGGCACACTCCGCCCCCGGC +
Preference number: 4 (lower is better)
Translates to: HLLEAEVRGRSGSGSPQLWQQEP*AHSAPG
Trigger: GCCGGGGGCGGAGTGTGCTCACGGCTCCTGCTGCCA...CAGCTGTGGGGACCCGGAGCCCGACCTGCCCCTGACCTCTGCTTCGAGAAGGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR GCA 90 bp AAGGGGTGCCCAGTGGCAGCTGCCATGATGCACCCACCATCAGCCGCACTGGCCGCCATACCTGCCCACTaGCCGGCGGTGGAGGCGCGT +
Preference number: 4 (lower is better)
Translates to: KGCPVAAAMMHPPSAALAAIPAH*PAVEAR
Trigger: ACGCGCCTCCACCGCCGGGCAGTGGGCAGGTATGGC...GGCCAGTGCGGCTGATGGTGGGTGCATCATGGCAGCTGCCACTGGGCACCCCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CCA 90 bp CACATTCACCTTCTCGAAGCAGAGGTCAGGGGCAGGTCGGGCTCCGGGTCCCCACGCCCCCTGGCATGGTaGCGGCGGCCCTTAGCGCTC +
Preference number: 4 (lower is better)
Translates to: HIHLLEAEVRGRSGSGSPRPLAW*RRPLAL
Trigger: GAGCGCTAAGGGCCGCCGCCACCATGCCAGGGGGCG...TGGGGACCCGGAGCCCGACCTGCCCCTGACCTCTGCTTCGAGAAGGTGAATGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR TCA 90 bp AGAAGTACGAGGAGGGGCCAAGTGTACACAGCCTCCCGCAGGCCAGGTGGCTTCTGGCAGCAGGAGCCGTaGGCACACTCCGCCCCCGGC +
Preference number: 4 (lower is better)
Translates to: RSTRRGQVYTASRRPGGFWQQEP*AHSAPG
Trigger: GCCGGGGGCGGAGTGTGCTCACGGCTCCTGCTGCCA...GAAGCCACCTGGCCTGCGGGAGGCTGTGTACACTTGGCCCCTCCTCGTACTTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR GCA 90 bp CACCTTCTCGAAGCAGAGGTCAGGGGCAGGTCGGGCTCCGGGTCCCCACAGCTGGTGAGCTGGCAGTGGTaGAGGTGGGGACCCACCACG +
Preference number: 4 (lower is better)
Translates to: HLLEAEVRGRSGSGSPQLVSWQW*RWGPTT
Trigger: CGTGGTGGGTCCCCACCTGCACCACTGCCAGCTCAC...CAGCTGTGGGGACCCGGAGCCCGACCTGCCCCTGACCTCTGCTTCGAGAAGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CCA 90 bp CACATTCACCTTCTCGAAGCAGAGGTCAGGGGCAGGTCGGGCTCCGGGTCCCCAGGAGGTCACACTGCCTaGCCTGCTCGCGGCACAGGG +
Preference number: 4 (lower is better)
Translates to: HIHLLEAEVRGRSGSGSPGGHTA*PARGTG
Trigger: CCCTGTGCCGCGAGCAGGCCAGGCAGTGTGACCTCC...TGGGGACCCGGAGCCCGACCTGCCCCTGACCTCTGCTTCGAGAAGGTGAATGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CCA 90 bp AAGGGGTGCCCAGTGGCAGCTGCCATGATGCACCCACCATCAGCCGCACTGGCCCCATCTCGTGGGCCATaGTGGCAGCCACGCCAATGG +
Preference number: 4 (lower is better)
Translates to: KGCPVAAAMMHPPSAALAPSRGP*WQPRQW
Trigger: CCATTGGCGTGGCTGCCACCATGGCCCACGAGATGG...GGCCAGTGCGGCTGATGGTGGGTGCATCATGGCAGCTGCCACTGGGCACCCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CCA 90 bp TGTCAGCCACACAGAAGAAGTACGAGGAGGGGCCAAGTGTACACAGCCTCCCGCGCCGGGAGTGCCTTCTaGGGCGGCCGAGGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: CQPHRRSTRRGQVYTASRAGSAF*GGRGLE
Trigger: CTCCAGGCCTCGGCCGCCCCAGAAGGCACTCCCGGC...GCGGGAGGCTGTGTACACTTGGCCCCTCCTCGTACTTCTTCTGTGTGGCTGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp CAGAAGAAGTACGAGGAGGGGCCAAGTGTACACAGCCTCCCGCAGGCCAGGTGGGAGGCTCCTGCGGCCTaGCACTGGGTTTGCCGGGAG +
Preference number: 4 (lower is better)
Translates to: QKKYEEGPSVHSLPQARWEAPAA*HWVCRE
Trigger: CTCCCGGCAAACCCAGTGCCAGGCCGCAGGAGCCTC...CCACCTGGCCTGCGGGAGGCTGTGTACACTTGGCCCCTCCTCGTACTTCTTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR GCA 90 bp TATCTAGCAAAGCACCACACGGCCCTCCTTCCCTGCTGCAGGGAAGACAGGAGCCGCGGCCGGAGGGGCTaGAGGGCAAACGCCAGCAAG +
Preference number: 4 (lower is better)
Translates to: YLAKHHTALLPCCREDRSRGRRG*RANASK
Trigger: CTTGCTGGCGTTTGCCCTGCAGCCCCTCCGGCCGCG...GCTCCTGTCTTCCCTGCAGCAGGGAAGGAGGGCCGTGTGGTGCTTTGCTAGATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp CCACATTCACCTTCTCGAAGCAGAGGTCAGGGGCAGGTCGGGCTCCGGGTCCCCTCGATACTGCCCCCGTaGCCCGGTGTGTTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: PHSPSRSRGQGQVGLRVPSILPP*PGVLQK
Trigger: CTTCTGCAACACACCGGGCCACGGGGGCAGTATCGA...GGGGACCCGGAGCCCGACCTGCCCCTGACCTCTGCTTCGAGAAGGTGAATGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR CAA 72 bp TGGAGGAGGCCTCCTGGACGACTCCGTCCTCTCTATTaGAGACCCGGGCCCTGGGGAGTTCCTAGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: WRRPPGRLRPLY*RPGPWGVPSSP
Trigger: AGGGCTGCTAGGAACTCCCCAGGGCCCGGGTCTCAAATAGAGAGGACGGAGTCGTCCAGGAGGCCTCCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR TCA 90 bp CGCACAGTGGACGGTGTGAGAGGACGCGTTGGGGGTGACTTTGGAAATGTGGGCGCACAGTGGACGGTGTaGGAGGACGCGTTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: RTVDGVRGRVGGDFGNVGAQWTV*EDALGV
Trigger: CACCCCCAACGCGTCCTCTCACACCGTCCACTGTGC...GCCCACATTTCCAAAGTCACCCCCAACGCGTCCTCTCACACCGTCCACTGTGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR GCA 90 bp CCGGCACTGGATCTGCCTCCCATTCATGATGATAGTGGTGTCAATGGGCACCGCCGTGGCCCGGTGTGTTaGAGAAGGGCGGGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: PALDLPPIHDDSGVNGHRRGPVC*RRAGPS
Trigger: GCTGGGCCCCGCCCTTCTGCAACACACCGGGCCACG...GCGGTGCCCATTGACACCACTATCATCATGAATGGGAGGCAGATCCAGTGCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR GCA 90 bp CACAGAAGAAGTACGAGGAGGGGCCAAGTGTACACAGCCTCCCGCAGGCCAGGTGTGAGCTGGCAGTGGTaGAGGTGGGGACCCACCACG +
Preference number: 4 (lower is better)
Translates to: HRRSTRRGQVYTASRRPGVSWQW*RWGPTT
Trigger: CGTGGTGGGTCCCCACCTGCACCACTGCCAGCTCAC...ACCTGGCCTGCGGGAGGCTGTGTACACTTGGCCCCTCCTCGTACTTCTTCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR GCA 90 bp GGAGGGGCCAAGTGTACACAGCCTCCCGCAGGCCAGGTGGCTTCTACTAATGCAGCCTGGCACTGGGTTTaGCGGGAGTGCCTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: GGAKCTQPPAGQVASTNAAWHWV*RECLLG
Trigger: CCCCAGAAGGCACTCCCGGCAAACCCAGTGCCAGGC...TGCATTAGTAGAAGCCACCTGGCCTGCGGGAGGCTGTGTACACTTGGCCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp AAACGCACAGTGGACGGTGTGAGAGGACGCGTTGGGGGTGACTTTGGAAATGTGCTGCGCCCCCTGGCATaGTGGCGGCGGCCCTTAGCG +
Preference number: 4 (lower is better)
Translates to: KRTVDGVRGRVGGDFGNVLRPLA*WRRPLA
Trigger: CGCTAAGGGCCGCCGCCACCATGCCAGGGGGCGCAG...CACATTTCCAAAGTCACCCCCAACGCGTCCTCTCACACCGTCCACTGTGCGTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp CCACATTCACCTTCTCGAAGCAGAGGTCAGGGGCAGGTCGGGCTCCGGGTCCCCTGGCAGCCACGCCAATaGCATTCTCGGAGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: PHSPSRSRGQGQVGLRVPWQPRQ*HSRSGP
Trigger: TGGACCACTCCGAGAATGCCATTGGCGTGGCTGCCA...GGGGACCCGGAGCCCGACCTGCCCCTGACCTCTGCTTCGAGAAGGTGAATGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CCA 90 bp GGGGACCTTTCCAGTTGGCGTTCCCATGGCTTTCTTGGGTGTCCAGCAGAGCTGGGAGGTCACACTGCCTaGCCTGCTCGCGGCACAGGG +
Preference number: 4 (lower is better)
Translates to: GDLSSWRSHGFLGCPAELGGHTA*PARGTG
Trigger: CCCTGTGCCGCGAGCAGGCCAGGCAGTGTGACCTCC...CAGCTCTGCTGGACACCCAAGAAAGCCATGGGAACGCCAACTGGAAAGGTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CCA 90 bp CATCAGCATGAGGACCGCCAGCACCAAGATGGCCACCAACACTCCAGCTACCACCAATGGGCACCGCGTTaGACTCCAGGGGCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: HQHEDRQHQDGHQHSSYHQWAPR*TPGAGP
Trigger: AGGCCCGGCCCCTGGAGTCCAACGCGGTGCCCATTG...GTGGTAGCTGGAGTGTTGGTGGCCATCTTGGTGCTGGCGGTCCTCATGCTGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CCA 90 bp AAACGCACAGTGGACGGTGTGAGAGGACGCGTTGGGGGTGACTTTGGAAATGTGGCCGGGAGTGCCTTCTaGGGCGGCCGAGGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: KRTVDGVRGRVGGDFGNVAGSAF*GGRGLE
Trigger: CTCCAGGCCTCGGCCGCCCCAGAAGGCACTCCCGGC...CACATTTCCAAAGTCACCCCCAACGCGTCCTCTCACACCGTCCACTGTGCGTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CCA 90 bp CGCACAGTGGACGGTGTGAGAGGACGCGTTGGGGGTGACTTTGGAAATGTGGGCCCTGCGGCCTGGCACTaGGTTTGCCGGGAGTGCCTT +
Preference number: 4 (lower is better)
Translates to: RTVDGVRGRVGGDFGNVGPAAWH*VCRECL
Trigger: AAGGCACTCCCGGCAAACCCAGTGCCAGGCCGCAGG...GCCCACATTTCCAAAGTCACCCCCAACGCGTCCTCTCACACCGTCCACTGTGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CCA 90 bp GGGGACCTTTCCAGTTGGCGTTCCCATGGCTTTCTTGGGTGTCCAGCAGAGCTGATGCACCTCCTGGCCTaGGGAGGCTCCTGCGGCCTG +
Preference number: 4 (lower is better)
Translates to: GDLSSWRSHGFLGCPAELMHLLA*GGSCGL
Trigger: CAGGCCGCAGGAGCCTCCCCAGGCCAGGAGGTGCAT...CAGCTCTGCTGGACACCCAAGAAAGCCATGGGAACGCCAACTGGAAAGGTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR TCA 90 bp TTTCAAGAGCAAACAATTGCTCATGGCAGGATGGGAGGAGGCCCCAGGAAAGCCTGGCAGCAGGAGCCGTaGGCACACTCCGCCCCCGGC +
Preference number: 4 (lower is better)
Translates to: FQEQTIAHGRMGGGPRKAWQQEP*AHSAPG
Trigger: GCCGGGGGCGGAGTGTGCTCACGGCTCCTGCTGCCA...GGCTTTCCTGGGGCCTCCTCCCATCCTGCCATGAGCAATTGTTTGCTCTTGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR TCA 90 bp CTTTGGAAATGTGGGCTTGGATTCTACAGAACCTCTCCTTCGCAGGCTCCCCTGTGGCAGCAGGAGCCGTaGGCACACTCCGCCCCCGGC +
Preference number: 4 (lower is better)
Translates to: LWKCGLGFYRTSPSQAPLWQQEP*AHSAPG
Trigger: GCCGGGGGCGGAGTGTGCTCACGGCTCCTGCTGCCA...CAGGGGAGCCTGCGAAGGAGAGGTTCTGTAGAATCCAAGCCCACATTTCCAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR TCA 90 bp CACATTCACCTTCTCGAAGCAGAGGTCAGGGGCAGGTCGGGCTCCGGGTCCCCAGGGGCGTCTGCAGCTTaGAAGTTGGGTTGGCATGAC +
Preference number: 4 (lower is better)
Translates to: HIHLLEAEVRGRSGSGSPGASAA*KLGWHD
Trigger: GTCATGCCAACCCAACTTTCAAGCTGCAGACGCCCC...TGGGGACCCGGAGCCCGACCTGCCCCTGACCTCTGCTTCGAGAAGGTGAATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR TCA 90 bp CGCACAGTGGACGGTGTGAGAGGACGCGTTGGGGGTGACTTTGGAAATGTGGGCTCCGTCCTCTCTATTTaGGACCCGGGCCCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: RTVDGVRGRVGGDFGNVGSVLSI*DPGPGE
Trigger: CTCCCCAGGGCCCGGGTCTCAAATAGAGAGGACGGA...GCCCACATTTCCAAAGTCACCCCCAACGCGTCCTCTCACACCGTCCACTGTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR TCA 90 bp TGTGGGCTTGGATTCTACAGAACCTCTCCTTCGCAGGCTCCCCTGGGGAAGGGGTCCGTCCTCTCTATTTaGGACCCGGGCCCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: CGLGFYRTSPSQAPLGKGSVLSI*DPGPGE
Trigger: CTCCCCAGGGCCCGGGTCTCAAATAGAGAGGACGGA...CCCCTTCCCCAGGGGAGCCTGCGAAGGAGAGGTTCTGTAGAATCCAAGCCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR GCA 90 bp CCACATTCACCTTCTCGAAGCAGAGGTCAGGGGCAGGTCGGGCTCCGGGTCCCCGGCCGAGCAGCAATCTaGAGAATCATGGGTCATGCC +
Preference number: 4 (lower is better)
Translates to: PHSPSRSRGQGQVGLRVPGRAAI*RIMGHA
Trigger: GGCATGACCCATGATTCTGCAGATTGCTGCTCGGCC...GGGGACCCGGAGCCCGACCTGCCCCTGACCTCTGCTTCGAGAAGGTGAATGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR GCA 90 bp GGGGACCTTTCCAGTTGGCGTTCCCATGGCTTTCTTGGGTGTCCAGCAGAGCTGTCACACTGCCTGGCCTaGTCGCGGCACAGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: GDLSSWRSHGFLGCPAELSHCLA*SRHRVP
Trigger: TGGGACCCTGTGCCGCGAGCAGGCCAGGCAGTGTGA...CAGCTCTGCTGGACACCCAAGAAAGCCATGGGAACGCCAACTGGAAAGGTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR GCA 90 bp CACATTGCCCTGGATCCCAGACACATACAAACGCACAGTGGACGGTGTGAGAGGCGTGGCCCGGTGTGTTaGAGAAGGGCGGGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: HIALDPRHIQTHSGRCERRGPVC*RRAGPS
Trigger: GCTGGGCCCCGCCCTTCTGCAACACACCGGGCCACG...CCTCTCACACCGTCCACTGTGCGTTTGTATGTGTCTGGGATCCAGGGCAATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR GCA 90 bp TGTGGGCTTGGATTCTACAGAACCTCTCCTTCGCAGGCTCCCCTGGGGAAGGGGCCTCTTTGGGGCAAGTaGTGCCAGAGGCCGGGACTG +
Preference number: 4 (lower is better)
Translates to: CGLGFYRTSPSQAPLGKGPLWGK*CQRPGL
Trigger: CAGTCCCGGCCTCTGGCAGCACTTGCCCCAAAGAGG...CCCCTTCCCCAGGGGAGCCTGCGAAGGAGAGGTTCTGTAGAATCCAAGCCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000517374.5
CDS-3UTR CCA 90 bp GAGGGGCCAAGTGTACACAGCCTCCCGCAGGCCAGGTGGCTTCTACTAATGCACCCCAGTCCCTGGTGGTaGGCTTGGAGTGCTCGAACC +
Preference number: 4 (lower is better)
Translates to: EGPSVHSLPQARWLLLMHPSPWW*AWSART
Trigger: GGTTCGAGCACTCCAAGCCCACCACCAGGGACTGGG...GTGCATTAGTAGAAGCCACCTGGCCTGCGGGAGGCTGTGTACACTTGGCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp CAGCATGAGGACCGCCAGCACCAAGATGGCCACCAACACTCCAGCTACCACAGGCCCAGTCCCTGGTGGTaGGCTTGGAGTGCTCGAACC +
Preference number: 4 (lower is better)
Translates to: QHEDRQHQDGHQHSSYHRPSPWW*AWSART
Trigger: GGTTCGAGCACTCCAAGCCCACCACCAGGGACTGGG...CCTGTGGTAGCTGGAGTGTTGGTGGCCATCTTGGTGCTGGCGGTCCTCATGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CCA 90 bp CTCGCGGCACAGGGTCCCAGGAGCCAACAGCTTACACTGGTGGCAGCAGGAGCCTCACACATGTTCCCGTaGGTCCACACTTCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: LAAQGPRSQQLTLVAAGASHMFP*VHTSKP
Trigger: GGGCTTGGAAGTGTGGACCCACGGGAACATGTGTGA...GGCTCCTGCTGCCACCAGTGTAAGCTGTTGGCTCCTGGGACCCTGTGCCGCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CCA 90 bp CGCACAGTGGACGGTGTGAGAGGACGCGTTGGGGGTGACTTTGGAAATGTGGGCCCATCTCGTGGGCCATaGTGGCAGCCACGCCAATGG +
Preference number: 4 (lower is better)
Translates to: RTVDGVRGRVGGDFGNVGPSRGP*WQPRQW
Trigger: CCATTGGCGTGGCTGCCACCATGGCCCACGAGATGG...GCCCACATTTCCAAAGTCACCCCCAACGCGTCCTCTCACACCGTCCACTGTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp TGCCGTTGTAGCAGTAGGCCTGGCCGCCCTCACAGGGGGTACCATCCATCTGGTCACCATCAGCCGCACTaGCCGAGCAGCAATCTGCAG +
Preference number: 4 (lower is better)
Translates to: CRCSSRPGRPHRGYHPSGHHQPH*PSSNLQ
Trigger: CTGCAGATTGCTGCTCGGCCAGTGCGGCTGATGGTG...ACCAGATGGATGGTACCCCCTGTGAGGGCGGCCAGGCCTACTGCTACAACGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CCA 90 bp TCCCAGAAATGGGTCTGTTCTCTGCTCAGAGGGCAACGGTCCAGCCCGAAGTCACAATGGGCACCGCGTTaGACTCCAGGGGCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: SQKWVCSLLRGQRSSPKSQWAPR*TPGAGP
Trigger: AGGCCCGGCCCCTGGAGTCCAACGCGGTGCCCATTG...TGACTTCGGGCTGGACCGTTGCCCTCTGAGCAGAGAACAGACCCATTTCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp AGAAGTACGAGGAGGGGCCAAGTGTACACAGCCTCCCGCAGGCCAGGTGGCTTCTCGATACTGCCCCCGTaGCCCGGTGTGTTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: RSTRRGQVYTASRRPGGFSILPP*PGVLQK
Trigger: CTTCTGCAACACACCGGGCCACGGGGGCAGTATCGA...GAAGCCACCTGGCCTGCGGGAGGCTGTGTACACTTGGCCCCTCCTCGTACTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp ACCCCAGGAGTGAATGGATGGCTTCTGCAAGCGAAGTGCTGGCCTGAGGGGCTTCAGGTGAGCTGGCAGTaGTGCAGGTGGGGACCCACC +
Preference number: 4 (lower is better)
Translates to: TPGVNGWLLQAKCWPEGLQVSWQ*CRWGPT
Trigger: GGTGGGTCCCCACCTGCACCACTGCCAGCTCACCTG...AAGCCCCTCAGGCCAGCACTTCGCTTGCAGAAGCCATCCATTCACTCCTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp TGTGGGCTTGGATTCTACAGAACCTCTCCTTCGCAGGCTCCCCTGGGGAAGGGGGGGAATTGGCCGGCTTaGAGGAGGCCTCCTGGACGA +
Preference number: 4 (lower is better)
Translates to: CGLGFYRTSPSQAPLGKGGNWPA*RRPPGR
Trigger: TCGTCCAGGAGGCCTCCTCCAAGCCGGCCAATTCCC...CCCCTTCCCCAGGGGAGCCTGCGAAGGAGAGGTTCTGTAGAATCCAAGCCCACA
62% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CCA 90 bp CGCACAGTGGACGGTGTGAGAGGACGCGTTGGGGGTGACTTTGGAAATGTGGGCGGGAATTGGCCGGCTTaGAGGAGGCCTCCTGGACGA +
Preference number: 4 (lower is better)
Translates to: RTVDGVRGRVGGDFGNVGGNWPA*RRPPGR
Trigger: TCGTCCAGGAGGCCTCCTCCAAGCCGGCCAATTCCC...GCCCACATTTCCAAAGTCACCCCCAACGCGTCCTCTCACACCGTCCACTGTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CCA 90 bp GGGGGTGACTTTGGAAATGTGGGCTTGGATTCTACAGAACCTCTCCTTCGCAGGGCCGGGAGTGCCTTCTaGGGCGGCCGAGGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: GGDFGNVGLDSTEPLLRRAGSAF*GGRGLE
Trigger: CTCCAGGCCTCGGCCGCCCCAGAAGGCACTCCCGGC...CCTGCGAAGGAGAGGTTCTGTAGAATCCAAGCCCACATTTCCAAAGTCACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CCA 90 bp CACCTTCTCGAAGCAGAGGTCAGGGGCAGGTCGGGCTCCGGGTCCCCACAGCTGACAGTTCCACTTGGCTaGGGAGCCCTCAGAATCATG +
Preference number: 4 (lower is better)
Translates to: HLLEAEVRGRSGSGSPQLTVPLG*GALRIM
Trigger: CATGATTCTGAGGGCTCCCCAGCCAAGTGGAACTGT...CAGCTGTGGGGACCCGGAGCCCGACCTGCCCCTGACCTCTGCTTCGAGAAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR CAA 72 bp TGCAAGCGAAGTGCTGGCCTGAGGGGCTTGCTGGCCTaGAGCATCTCCATCAGCACCTCGGGGCTAGGAGTC +
Preference number: 4 (lower is better)
Translates to: CKRSAGLRGLLA*SISISTSGLGV
Trigger: GACTCCTAGCCCCGAGGTGCTGATGGAGATGCTCAAGGCCAGCAAGCCCCTCAGGCCAGCACTTCGCTTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR CAA 72 bp GATGGCTTCTGCAAGCGAAGTGCTGGCCTGAGGGGCTaGCTGGCCTTGAGCATCTCCATCAGCACCTCGGGG +
Preference number: 4 (lower is better)
Translates to: DGFCKRSAGLRG*LALSISISTSG
Trigger: CCCCGAGGTGCTGATGGAGATGCTCAAGGCCAGCAAGCCCCTCAGGCCAGCACTTCGCTTGCAGAAGCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR TCA 90 bp TATCTAGCAAAGCACCACACGGCCCTCCTTCCCTGCTGCAGGGAAGACAGGAGCCAGTGGCAGCTGCCATaGTGCACCCACCATCAGCCG +
Preference number: 4 (lower is better)
Translates to: YLAKHHTALLPCCREDRSQWQLP*CTHHQP
Trigger: CGGCTGATGGTGGGTGCATCATGGCAGCTGCCACTG...GCTCCTGTCTTCCCTGCAGCAGGGAAGGAGGGCCGTGTGGTGCTTTGCTAGATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR TCA 90 bp CTCGCGGCACAGGGTCCCAGGAGCCAACAGCTTACACTGGTGGCAGCAGGAGCCGGAGAGCTGAGGGCTTaGGTTGGCCTAGTTTGTTGT +
Preference number: 4 (lower is better)
Translates to: LAAQGPRSQQLTLVAAGAGELRA*VGLVCC
Trigger: ACAACAAACTAGGCCAACTCAAGCCCTCAGCTCTCC...GGCTCCTGCTGCCACCAGTGTAAGCTGTTGGCTCCTGGGACCCTGTGCCGCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR TCA 90 bp TTCACATTGCCCTGGATCCCAGACACATACAAACGCACAGTGGACGGTGTGAGAAGAGGCCGGGACTGCTaGGGGCCAGCACCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: FTLPWIPDTYKRTVDGVRRGRDC*GPAPGG
Trigger: GCCCCCTGGTGCTGGCCCTCAGCAGTCCCGGCCTCT...TCTCACACCGTCCACTGTGCGTTTGTATGTGTCTGGGATCCAGGGCAATGTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR TCA 90 bp GCCAGGTGGCTTCTACTAATGCACTTCCTTGCTCTTCACAACAACCTGATGGGGAGAGGCCGGGACTGCTaGGGGCCAGCACCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: ARWLLLMHFLALHNNLMGRGRDC*GPAPGG
Trigger: GCCCCCTGGTGCTGGCCCTCAGCAGTCCCGGCCTCT...CCCCATCAGGTTGTTGTGAAGAGCAAGGAAGTGCATTAGTAGAAGCCACCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR TCA 90 bp GAGGGTGGACTGCAGGTTCAGATGGCTCATGCAGTCACTATGGCTGTGGCGCTGCCAGCCCGAAGTCAATaGCCAGCCTGCTCCCTCGTG +
Preference number: 4 (lower is better)
Translates to: EGGLQVQMAHAVTMAVALPARSQ*PACSLV
Trigger: CACGAGGGAGCAGGCTGGTCATTGACTTCGGGCTGG...CAGCGCCACAGCCATAGTGACTGCATGAGCCATCTGAACCTGCAGTCCACCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR TCA 90 bp GGGGACCTTTCCAGTTGGCGTTCCCATGGCTTTCTTGGGTGTCCAGCAGAGCTGCCTGGGCAGCCTCCCTaGACAGAGCCAGGAGTGAAG +
Preference number: 4 (lower is better)
Translates to: GDLSSWRSHGFLGCPAELPGQPP*TEPGVK
Trigger: CTTCACTCCTGGCTCTGTTCAGGGAGGCTGCCCAGG...CAGCTCTGCTGGACACCCAAGAAAGCCATGGGAACGCCAACTGGAAAGGTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR GCA 90 bp AGAAGTACGAGGAGGGGCCAAGTGTACACAGCCTCCCGCAGGCCAGGTGGCTTCGTGGTGGGCTTGGAGTaGTCGAACCCACAGTTTCCC +
Preference number: 4 (lower is better)
Translates to: RSTRRGQVYTASRRPGGFVVGLE*SNPQFP
Trigger: GGGAAACTGTGGGTTCGAGCACTCCAAGCCCACCAC...GAAGCCACCTGGCCTGCGGGAGGCTGTGTACACTTGGCCCCTCCTCGTACTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR GCA 90 bp AGCCACACAGAAGAAGTACGAGGAGGGGCCAAGTGTACACAGCCTCCCGCAGGCGTGCCCAGTGGCAGCTaGCATGATGCACCCACCATC +
Preference number: 4 (lower is better)
Translates to: SHTEEVRGGAKCTQPPAGVPSGS*HDAPTI
Trigger: GATGGTGGGTGCATCATGGCAGCTGCCACTGGGCAC...GCCTGCGGGAGGCTGTGTACACTTGGCCCCTCCTCGTACTTCTTCTGTGTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR GCA 90 bp CCGGCACTGGATCTGCCTCCCATTCATGATGATAGTGGTGTCAATGGGCACCGCTCACACTGCCTGGCCTaGTCGCGGCACAGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: PALDLPPIHDDSGVNGHRSHCLA*SRHRVP
Trigger: TGGGACCCTGTGCCGCGAGCAGGCCAGGCAGTGTGA...GCGGTGCCCATTGACACCACTATCATCATGAATGGGAGGCAGATCCAGTGCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR GCA 90 bp TGTACAAATGAGGAAACAGACTCAAGAGGGACTTGCTCAGGGTCCCTCCCCAGGCGTGGCCCGGTGTGTTaGAGAAGGGCGGGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: CTNEETDSRGTCSGSLPRRGPVC*RRAGPS
Trigger: GCTGGGCCCCGCCCTTCTGCAACACACCGGGCCACG...CCTGGGGAGGGACCCTGAGCAAGTCCCTCTTGAGTCTGTTTCCTCATTTGTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR GCA 90 bp CTTTGGAAATGTGGGCTTGGATTCTACAGAACCTCTCCTTCGCAGGCTCCCCTGGGGCCGCAGTGGGGATaGACCTCCTGGCCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: LWKCGLGFYRTSPSQAPLGPQWG*TSWPGE
Trigger: CTCCCCAGGCCAGGAGGTGCATCCCCACTGCGGCCC...CAGGGGAGCCTGCGAAGGAGAGGTTCTGTAGAATCCAAGCCCACATTTCCAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR GCA 90 bp CGTGGGAATACAGCATGGTCAGCCAGCTTCTTCACCTCATCCCTTTCTGACCTGGGGCCGCAGTGGGGATaGACCTCCTGGCCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: RGNTAWSASFFTSSLSDLGPQWG*TSWPGE
Trigger: CTCCCCAGGCCAGGAGGTGCATCCCCACTGCGGCCC...CAGGTCAGAAAGGGATGAGGTGAAGAAGCTGGCTGACCATGCTGTATTCCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR GCA 90 bp TGTCAGCCACACAGAAGAAGTACGAGGAGGGGCCAAGTGTACACAGCCTCCCGCCACCTTTGGGGCAAGTaGTGCCAGAGGCCGGGACTG +
Preference number: 4 (lower is better)
Translates to: CQPHRRSTRRGQVYTASRHLWGK*CQRPGL
Trigger: CAGTCCCGGCCTCTGGCAGCACTTGCCCCAAAGGTG...GCGGGAGGCTGTGTACACTTGGCCCCTCCTCGTACTTCTTCTGTGTGGCTGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp GGAGGGGCCAAGTGTACACAGCCTCCCGCAGGCCAGGTGGCTTCTACTAATGCACCCTGGTGGTGGGCTTaGAGTGCTCGAACCCACAGT +
Preference number: 4 (lower is better)
Translates to: GGAKCTQPPAGQVASTNAPWWWA*SARTHS
Trigger: ACTGTGGGTTCGAGCACTCCAAGCCCACCACCAGGG...TGCATTAGTAGAAGCCACCTGGCCTGCGGGAGGCTGTGTACACTTGGCCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp CATCAGCATGAGGACCGCCAGCACCAAGATGGCCACCAACACTCCAGCTACCACGAGCCCAGTCCCTGGTaGTGGGCTTGGAGTGCTCGA +
Preference number: 4 (lower is better)
Translates to: HQHEDRQHQDGHQHSSYHEPSPW*WAWSAR
Trigger: TCGAGCACTCCAAGCCCACCACCAGGGACTGGGCTC...GTGGTAGCTGGAGTGTTGGTGGCCATCTTGGTGCTGGCGGTCCTCATGCTGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CCA 90 bp GAGGGTGGACTGCAGGTTCAGATGGCTCATGCAGTCACTATGGCTGTGGCGCTGACCACGCAGATAATCTaGAGGGGGCCGGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: EGGLQVQMAHAVTMAVALTTQII*RGPGRR
Trigger: CCTCCTCCCCGGCCCCCTCCAGATTATCTGCGTGGT...CAGCGCCACAGCCATAGTGACTGCATGAGCCATCTGAACCTGCAGTCCACCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp TGTCAGCCACACAGAAGAAGTACGAGGAGGGGCCAAGTGTACACAGCCTCCCGCACCACGCAGATAATCTaGAGGGGGCCGGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: CQPHRRSTRRGQVYTASRTTQII*RGPGRR
Trigger: CCTCCTCCCCGGCCCCCTCCAGATTATCTGCGTGGT...GCGGGAGGCTGTGTACACTTGGCCCCTCCTCGTACTTCTTCTGTGTGGCTGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp AGCCACACAGAAGAAGTACGAGGAGGGGCCAAGTGTACACAGCCTCCCGCAGGCTGGCAGTGGTGCAGGTaGGGACCCACCACGCAGATA +
Preference number: 4 (lower is better)
Translates to: SHTEEVRGGAKCTQPPAGWQWCR*GPTTQI
Trigger: TATCTGCGTGGTGGGTCCCCACCTGCACCACTGCCA...GCCTGCGGGAGGCTGTGTACACTTGGCCCCTCCTCGTACTTCTTCTGTGTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp TGTCAGCCACACAGAAGAAGTACGAGGAGGGGCCAAGTGTACACAGCCTCCCGCGGGAATTGGCCGGCTTaGAGGAGGCCTCCTGGACGA +
Preference number: 4 (lower is better)
Translates to: CQPHRRSTRRGQVYTASRGNWPA*RRPPGR
Trigger: TCGTCCAGGAGGCCTCCTCCAAGCCGGCCAATTCCC...GCGGGAGGCTGTGTACACTTGGCCCCTCCTCGTACTTCTTCTGTGTGGCTGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp GGGACCTTTCCAGTTGGCGTTCCCATGGCTTTCTTGGGTGTCCAGCAGAGCTGTGGGGCGGCCGAGGCCTaGAGAAGTCCTGGGAAACGA +
Preference number: 4 (lower is better)
Translates to: GTFPVGVPMAFLGVQQSCGAAEA*RSPGKR
Trigger: TCGTTTCCCAGGACTTCTCCAGGCCTCGGCCGCCCC...ACAGCTCTGCTGGACACCCAAGAAAGCCATGGGAACGCCAACTGGAAAGGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CCA 90 bp AAACGCACAGTGGACGGTGTGAGAGGACGCGTTGGGGGTGACTTTGGAAATGTGATGCACCTCCTGGCCTaGGGAGGCTCCTGCGGCCTG +
Preference number: 4 (lower is better)
Translates to: KRTVDGVRGRVGGDFGNVMHLLA*GGSCGL
Trigger: CAGGCCGCAGGAGCCTCCCCAGGCCAGGAGGTGCAT...CACATTTCCAAAGTCACCCCCAACGCGTCCTCTCACACCGTCCACTGTGCGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CCA 90 bp CACAGAAGAAGTACGAGGAGGGGCCAAGTGTACACAGCCTCCCGCAGGCCAGGTCCGTGGACTCACCTTTaGGGCAAGTGCTGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: HRRSTRRGQVYTASRRPGPWTHL*GKCCQR
Trigger: CCTCTGGCAGCACTTGCCCCAAAGGTGAGTCCACGG...ACCTGGCCTGCGGGAGGCTGTGTACACTTGGCCCCTCCTCGTACTTCTTCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR TCA 90 bp TGCCGTTGTAGCAGTAGGCCTGGCCGCCCTCACAGGGGGTACCATCCATCTGGTCGGAGTGGTCCATGTTaGCTCCTCCAGACTGGTACA +
Preference number: 4 (lower is better)
Translates to: CRCSSRPGRPHRGYHPSGRSGPC*LLQTGT
Trigger: TGTACCAGTCTGGAGGAGTCAACATGGACCACTCCG...ACCAGATGGATGGTACCCCCTGTGAGGGCGGCCAGGCCTACTGCTACAACGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR TCA 90 bp TCGCTTGCCCTGGGGCGTCTGCAGCTTGAAAGTTGGGTTGGCATGACCAGTCCCACTGCTCCTGGTAGGTaGGGCACATGCCGTTGTAGC +
Preference number: 4 (lower is better)
Translates to: SLALGRLQLESWVGMTSPTAPGR*GTCRCS
Trigger: GCTACAACGGCATGTGCCTCACCTACCAGGAGCAGT...GGGACTGGTCATGCCAACCCAACTTTCAAGCTGCAGACGCCCCAGGGCAAGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR TCA 90 bp TCCCAGAAATGGGTCTGTTCTCTGCTCAGAGGGCAACGGTCCAGCCCGAAGTCAGGCTGCCTTCTCCAGTaGTCTCGGGCAGCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: SQKWVCSLLRGQRSSPKSGCLLQ*SRAAPR
Trigger: TCTGGGAGCTGCCCGAGATCACTGGAGAAGGCAGCC...TGACTTCGGGCTGGACCGTTGCCCTCTGAGCAGAGAACAGACCCATTTCTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR GCA 90 bp TGGTACTTCTGGGCAAGCAGCTTGCGCCTCCAACTGAGAAAGGACCAGAGGGTACCAGGCCGATGGTGGTaGCGTGGAAGGACATGCCCG +
Preference number: 4 (lower is better)
Translates to: WYFWASSLRLQLRKDQRVPGRWW*RGRTCP
Trigger: CGGGCATGTCCTTCCACGGCACCACCATCGGCCTGG...TACCCTCTGGTCCTTTCTCAGTTGGAGGCGCAAGCTGCTTGCCCAGAAGTACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR GCA 90 bp CACCTTCTCGAAGCAGAGGTCAGGGGCAGGTCGGGCTCCGGGTCCCCACAGCTGCAGAATCATGGGTCATaGCAAAGTTGTGGCCCATCT +
Preference number: 4 (lower is better)
Translates to: HLLEAEVRGRSGSGSPQLQNHGS*QSCGPS
Trigger: AGATGGGCCACAACTTTGGCATGACCCATGATTCTG...CAGCTGTGGGGACCCGGAGCCCGACCTGCCCCTGACCTCTGCTTCGAGAAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR GCA 90 bp TGGGAGGGCTTCCGCAGGATTTCCGGAGTGTTGATCACCTTTCGCTTGCCCTGGGTGCCCAGTGGCAGCTaGCATGATGCACCCACCATC +
Preference number: 4 (lower is better)
Translates to: WEGFRRISGVLITFRLPWVPSGS*HDAPTI
Trigger: GATGGTGGGTGCATCATGGCAGCTGCCACTGGGCAC...CCAGGGCAAGCGAAAGGTGATCAACACTCCGGAAATCCTGCGGAAGCCCTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR GCA 90 bp TGTGGGCTTGGATTCTACAGAACCTCTCCTTCGCAGGCTCCCCTGGGGAAGGGGACTTTGGGAAAGGGGTaGCCAGTGGCAGCTGCCATG +
Preference number: 4 (lower is better)
Translates to: CGLGFYRTSPSQAPLGKGTLGKG*PVAAAM
Trigger: CATGGCAGCTGCCACTGGGCACCCCTTTCCCAAAGT...CCCCTTCCCCAGGGGAGCCTGCGAAGGAGAGGTTCTGTAGAATCCAAGCCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR GCA 90 bp CATCAGCATGAGGACCGCCAGCACCAAGATGGCCACCAACACTCCAGCTACCACGGCAGTGGGGAGACTTaGCCGTACAGAACTCCGGGA +
Preference number: 4 (lower is better)
Translates to: HQHEDRQHQDGHQHSSYHGSGET*PYRTPG
Trigger: TCCCGGAGTTCTGTACGGGCAAGTCTCCCCACTGCC...GTGGTAGCTGGAGTGTTGGTGGCCATCTTGGTGCTGGCGGTCCTCATGCTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR GCA 90 bp AAACGCACAGTGGACGGTGTGAGAGGACGCGTTGGGGGTGACTTTGGAAATGTGGCCCACTGTCGATACTaGCCCCGTGGCCCGGTGTGT +
Preference number: 4 (lower is better)
Translates to: KRTVDGVRGRVGGDFGNVAHCRY*PRGPVC
Trigger: ACACACCGGGCCACGGGGGCAGTATCGACAGTGGGC...CACATTTCCAAAGTCACCCCCAACGCGTCCTCTCACACCGTCCACTGTGCGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR GCA 90 bp AAACGCACAGTGGACGGTGTGAGAGGACGCGTTGGGGGTGACTTTGGAAATGTGGTGAGCTGGCAGTGGTaGAGGTGGGGACCCACCACG +
Preference number: 4 (lower is better)
Translates to: KRTVDGVRGRVGGDFGNVVSWQW*RWGPTT
Trigger: CGTGGTGGGTCCCCACCTGCACCACTGCCAGCTCAC...CACATTTCCAAAGTCACCCCCAACGCGTCCTCTCACACCGTCCACTGTGCGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR GCA 90 bp GAGGACGCGTTGGGGGTGACTTTGGAAATGTGGGCTTGGATTCTACAGAACCTCTGGGTTTGCCGGGAGTaGCTTCTGGGGCGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: EDALGVTLEMWAWILQNLWVCRE*LLGRPR
Trigger: CCTCGGCCGCCCCAGAAGGCACTCCCGGCAAACCCA...GAGGTTCTGTAGAATCCAAGCCCACATTTCCAAAGTCACCCCCAACGCGTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR GCA 90 bp CTTTGGAAATGTGGGCTTGGATTCTACAGAACCTCTCCTTCGCAGGCTCCCCTGTGGGTTTGCCGGGAGTaGCTTCTGGGGCGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: LWKCGLGFYRTSPSQAPLWVCRE*LLGRPR
Trigger: CCTCGGCCGCCCCAGAAGGCACTCCCGGCAAACCCA...CAGGGGAGCCTGCGAAGGAGAGGTTCTGTAGAATCCAAGCCCACATTTCCAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CCA 90 bp TCGCTTGCCCTGGGGCGTCTGCAGCTTGAAAGTTGGGTTGGCATGACCAGTCCCCCGATGGTGGTGCCGTaGAAGGACATGCCCGTGATT +
Preference number: 4 (lower is better)
Translates to: SLALGRLQLESWVGMTSPPMVVP*KDMPVI
Trigger: AATCACGGGCATGTCCTTCCACGGCACCACCATCGG...GGGACTGGTCATGCCAACCCAACTTTCAAGCTGCAGACGCCCCAGGGCAAGCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CCA 90 bp CACATTGCCCTGGATCCCAGACACATACAAACGCACAGTGGACGGTGTGAGAGGGGGCCAGGCCGATGGTaGTGCCGTGGAAGGACATGC +
Preference number: 4 (lower is better)
Translates to: HIALDPRHIQTHSGRCERGPGRW*CRGRTC
Trigger: GCATGTCCTTCCACGGCACCACCATCGGCCTGGCCC...CCTCTCACACCGTCCACTGTGCGTTTGTATGTGTCTGGGATCCAGGGCAATGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp TGGTACTTCTGGGCAAGCAGCTTGCGCCTCCAACTGAGAAAGGACCAGAGGGTAGGGCCAGGCCGATGGTaGTGCCGTGGAAGGACATGC +
Preference number: 4 (lower is better)
Translates to: WYFWASSLRLQLRKDQRVGPGRW*CRGRTC
Trigger: GCATGTCCTTCCACGGCACCACCATCGGCCTGGCCC...TACCCTCTGGTCCTTTCTCAGTTGGAGGCGCAAGCTGCTTGCCCAGAAGTACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CCA 90 bp CCACATTCACCTTCTCGAAGCAGAGGTCAGGGGCAGGTCGGGCTCCGGGTCCCCAGGCAGTGGCAGTTCTaGTTGTTGTTACAGACCCCA +
Preference number: 4 (lower is better)
Translates to: PHSPSRSRGQGQVGLRVPRQWQF*LLLQTP
Trigger: TGGGGTCTGTAACAACAACCAGAACTGCCACTGCCT...GGGGACCCGGAGCCCGACCTGCCCCTGACCTCTGCTTCGAGAAGGTGAATGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CCA 90 bp TGGGAGGGCTTCCGCAGGATTTCCGGAGTGTTGATCACCTTTCGCTTGCCCTGGTGGCAGTGGTGCAGGTaGGGACCCACCACGCAGATA +
Preference number: 4 (lower is better)
Translates to: WEGFRRISGVLITFRLPWWQWCR*GPTTQI
Trigger: TATCTGCGTGGTGGGTCCCCACCTGCACCACTGCCA...CCAGGGCAAGCGAAAGGTGATCAACACTCCGGAAATCCTGCGGAAGCCCTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CCA 90 bp TCTCCAGGTGCTTTGCAAAAACCGTCCTATCTAGCAAAGCACCACACGGCCCTCGAGGCTCCTGCGGCCTaGCACTGGGTTTGCCGGGAG +
Preference number: 4 (lower is better)
Translates to: SPGALQKPSYLAKHHTALEAPAA*HWVCRE
Trigger: CTCCCGGCAAACCCAGTGCCAGGCCGCAGGAGCCTC...GAGGGCCGTGTGGTGCTTTGCTAGATAGGACGGTTTTTGCAAAGCACCTGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR CAA 72 bp CAGGCCAGCTCCTGTCCGGAGAGCCACCCAGCACCTTaGTGGAGTGGGAGTCTATCTCCCAGCAAACATCTC +
Preference number: 4 (lower is better)
Translates to: QASSCPESHPAP*WSGSLSPSKHL
Trigger: GAGATGTTTGCTGGGAGATAGACTCCCACTCCACAAAGGTGCTGGGTGGCTCTCCGGACAGGAGCTGGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR TCA 90 bp CACATTCACCTTCTCGAAGCAGAGGTCAGGGGCAGGTCGGGCTCCGGGTCCCCAAGTTGGCGATCTCTATaGGCTTGTGTTTGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: HIHLLEAEVRGRSGSGSPSWRSL*ACVWWR
Trigger: ACGCCACCAAACACAAGCTCATAGAGATCGCCAACT...TGGGGACCCGGAGCCCGACCTGCCCCTGACCTCTGCTTCGAGAAGGTGAATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR TCA 90 bp CCCAGAAATGGGTCTGTTCTCTGCTCAGAGGGCAACGGTCCAGCCCGAAGTCAACGGGCCTCAGAGCTCTaGCACTGGATCTTCCCACAC +
Preference number: 4 (lower is better)
Translates to: PRNGSVLCSEGNGPARSQRASEL*HWIFPH
Trigger: GTGTGGGAAGATCCAGTGTCAGAGCTCTGAGGCCCG...TTGACTTCGGGCTGGACCGTTGCCCTCTGAGCAGAGAACAGACCCATTTCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR TCA 90 bp CAGCATGAGGACCGCCAGCACCAAGATGGCCACCAACACTCCAGCTACCACAGGCCAGTCCCGCTGTTCTaGGAAACCCTGAAGGGACAA +
Preference number: 4 (lower is better)
Translates to: QHEDRQHQDGHQHSSYHRPVPLF*ETLKGQ
Trigger: TTGTCCCTTCAGGGTTTCTCAGAACAGCGGGACTGG...CCTGTGGTAGCTGGAGTGTTGGTGGCCATCTTGGTGCTGGCGGTCCTCATGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR TCA 90 bp CTGGGCAAGCAGCTTGCGCCTCCAACTGAGAAAGGACCAGAGGGTAGAATATGGTCCGTCCTCTCTATTTaGGACCCGGGCCCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: LGKQLAPPTEKGPEGRIWSVLSI*DPGPGE
Trigger: CTCCCCAGGGCCCGGGTCTCAAATAGAGAGGACGGA...CCATATTCTACCCTCTGGTCCTTTCTCAGTTGGAGGCGCAAGCTGCTTGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR TCA 90 bp AAACGCACAGTGGACGGTGTGAGAGGACGCGTTGGGGGTGACTTTGGAAATGTGCCAGCCCGGGACCTCTaGGGAGAGCAGAAGCAATGG +
Preference number: 4 (lower is better)
Translates to: KRTVDGVRGRVGGDFGNVPARDL*GEQKQW
Trigger: CCATTGCTTCTGCTCTCCTCAGAGGTCCCGGGCTGG...CACATTTCCAAAGTCACCCCCAACGCGTCCTCTCACACCGTCCACTGTGCGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR GCA 90 bp TTCCAGTTGGCGTTCCCATGGCTTTCTTGGGTGTCCAGCAGAGCTGTTATACACGCCCTCAGCCATACCTaGCCACTGCCCGGCGGTGGA +
Preference number: 4 (lower is better)
Translates to: FQLAFPWLSWVSSRAVIHALSHT*PLPGGG
Trigger: TCCACCGCCGGGCAGTGGGCAGGTATGGCTGAGGGC...GTGTATAACAGCTCTGCTGGACACCCAAGAAAGCCATGGGAACGCCAACTGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR GCA 90 bp AGTCCCGCTGTTCTGAGAAACCCTGAAGGGACAACTGAACTGTTGCCTCAGCTTGCCCTCAGCCATACCTaGCCACTGCCCGGCGGTGGA +
Preference number: 4 (lower is better)
Translates to: SPAVLRNPEGTTELLPQLALSHT*PLPGGG
Trigger: TCCACCGCCGGGCAGTGGGCAGGTATGGCTGAGGGC...AAGCTGAGGCAACAGTTCAGTTGTCCCTTCAGGGTTTCTCAGAACAGCGGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR GCA 90 bp CACATTCACCTTCTCGAAGCAGAGGTCAGGGGCAGGTCGGGCTCCGGGTCCCCAGGTATGATAAGTTCATaGTGCAGCTTGGGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: HIHLLEAEVRGRSGSGSPGMISS*CSLGLP
Trigger: AGGCAGCCCCAAGCTGCAGCATGAACTTATCATACC...TGGGGACCCGGAGCCCGACCTGCCCCTGACCTCTGCTTCGAGAAGGTGAATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR GCA 90 bp GAGGGTGGACTGCAGGTTCAGATGGCTCATGCAGTCACTATGGCTGTGGCGCTGGTGGTGGGCTTGGAGTaGTCGAACCCACAGTTTCCC +
Preference number: 4 (lower is better)
Translates to: EGGLQVQMAHAVTMAVALVVGLE*SNPQFP
Trigger: GGGAAACTGTGGGTTCGAGCACTCCAAGCCCACCAC...CAGCGCCACAGCCATAGTGACTGCATGAGCCATCTGAACCTGCAGTCCACCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR GCA 90 bp ACGGTCCAGCCCGAAGTCAATGACCAGCCTGCTCCCTCGTGTGTACTTTGTAAACCAGGCCGATGGTGGTaGCGTGGAAGGACATGCCCG +
Preference number: 4 (lower is better)
Translates to: TVQPEVNDQPAPSCVLCKPGRWW*RGRTCP
Trigger: CGGGCATGTCCTTCCACGGCACCACCATCGGCCTGG...TTTACAAAGTACACACGAGGGAGCAGGCTGGTCATTGACTTCGGGCTGGACCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR GCA 90 bp AGCCACACAGAAGAAGTACGAGGAGGGGCCAAGTGTACACAGCCTCCCGCAGGCGGCCGAGCAGCAATCTaGAGAATCATGGGTCATGCC +
Preference number: 4 (lower is better)
Translates to: SHTEEVRGGAKCTQPPAGGRAAI*RIMGHA
Trigger: GGCATGACCCATGATTCTGCAGATTGCTGCTCGGCC...GCCTGCGGGAGGCTGTGTACACTTGGCCCCTCCTCGTACTTCTTCTGTGTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR GCA 90 bp GGGACCTTTCCAGTTGGCGTTCCCATGGCTTTCTTGGGTGTCCAGCAGAGCTGTGGCAGTGGGGAGACTTaGCCGTACAGAACTCCGGGA +
Preference number: 4 (lower is better)
Translates to: GTFPVGVPMAFLGVQQSCGSGET*PYRTPG
Trigger: TCCCGGAGTTCTGTACGGGCAAGTCTCCCCACTGCC...ACAGCTCTGCTGGACACCCAAGAAAGCCATGGGAACGCCAACTGGAAAGGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR GCA 90 bp CAGAAGAAGTACGAGGAGGGGCCAAGTGTACACAGCCTCCCGCAGGCCAGGTGGCCCCGGCACTGGATCTaGCTCCCATTCATGATGATA +
Preference number: 4 (lower is better)
Translates to: QKKYEEGPSVHSLPQARWPRHWI*LPFMMI
Trigger: TATCATCATGAATGGGAGGCAGATCCAGTGCCGGGG...CCACCTGGCCTGCGGGAGGCTGTGTACACTTGGCCCCTCCTCGTACTTCTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR GCA 90 bp TGGGCTTCCAAGGAAGCCGAGGAGGCACTGAGTCAACAGGGAGATTTTTGGAGACTCGGTAGACGTGGGTaGCCCGGCACTGGATCTGCC +
Preference number: 4 (lower is better)
Translates to: WASKEAEEALSQQGDFWRLGRRG*PGTGSA
Trigger: GGCAGATCCAGTGCCGGGGCACCCACGTCTACCGAG...TCTCCAAAAATCTCCCTGTTGACTCAGTGCCTCCTCGGCTTCCTTGGAAGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR GCA 90 bp TGTACAAATGAGGAAACAGACTCAAGAGGGACTTGCTCAGGGTCCCTCCCCAGGCTCGGTAGACGTGGGTaGCCCGGCACTGGATCTGCC +
Preference number: 4 (lower is better)
Translates to: CTNEETDSRGTCSGSLPRLGRRG*PGTGSA
Trigger: GGCAGATCCAGTGCCGGGGCACCCACGTCTACCGAG...CCTGGGGAGGGACCCTGAGCAAGTCCCTCTTGAGTCTGTTTCCTCATTTGTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR GCA 90 bp TTTCCAGTTGGCGTTCCCATGGCTTTCTTGGGTGTCCAGCAGAGCTGTTATACACGTGGCCCGGTGTGTTaGAGAAGGGCGGGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: FPVGVPMAFLGVQQSCYTRGPVC*RRAGPS
Trigger: GCTGGGCCCCGCCCTTCTGCAACACACCGGGCCACG...TGTATAACAGCTCTGCTGGACACCCAAGAAAGCCATGGGAACGCCAACTGGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR GCA 90 bp GAGGGGCCAAGTGTACACAGCCTCCCGCAGGCCAGGTGGCTTCTACTAATGCACTTGCCCTGGGGCGTCTaGAGCTTGAAAGTTGGGTTG +
Preference number: 4 (lower is better)
Translates to: EGPSVHSLPQARWLLLMHLPWGV*SLKVGL
Trigger: CAACCCAACTTTCAAGCTGCAGACGCCCCAGGGCAA...GTGCATTAGTAGAAGCCACCTGGCCTGCGGGAGGCTGTGTACACTTGGCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR GCA 90 bp GGCCAGGTGGCTTCTACTAATGCACTTCCTTGCTCTTCACAACAACCTGATGGGTGGGTTTGCCGGGAGTaGCTTCTGGGGCGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: GQVASTNALPCSSQQPDGWVCRE*LLGRPR
Trigger: CCTCGGCCGCCCCAGAAGGCACTCCCGGCAAACCCA...CCCATCAGGTTGTTGTGAAGAGCAAGGAAGTGCATTAGTAGAAGCCACCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR GCA 90 bp GAGGGTGGACTGCAGGTTCAGATGGCTCATGCAGTCACTATGGCTGTGGCGCTGAAACTTTGGGGCAAGTaGTGCCAGAGGCCGGGACTG +
Preference number: 4 (lower is better)
Translates to: EGGLQVQMAHAVTMAVALKLWGK*CQRPGL
Trigger: CAGTCCCGGCCTCTGGCAGCACTTGCCCCAAAGTTT...CAGCGCCACAGCCATAGTGACTGCATGAGCCATCTGAACCTGCAGTCCACCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR GCA 90 bp TGTACAAATGAGGAAACAGACTCAAGAGGGACTTGCTCAGGGTCCCTCCCCAGGCCTCCCCAGGTCAGGTaGAGGGGCAGGACTGAAGCC +
Preference number: 4 (lower is better)
Translates to: CTNEETDSRGTCSGSLPRPPQVR*RGRTEA
Trigger: GGCTTCAGTCCTGCCCCTGCACCTGACCTGGGGAGG...CCTGGGGAGGGACCCTGAGCAAGTCCCTCTTGAGTCTGTTTCCTCATTTGTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp GGAGGGGCCAAGTGTACACAGCCTCCCGCAGGCCAGGTGGCTTCTACTAATGCAAAGTTGGTAGGGCAGTaGGGAGACTTGCCCGTACAG +
Preference number: 4 (lower is better)
Translates to: GGAKCTQPPAGQVASTNAKLVGQ*GDLPVQ
Trigger: CTGTACGGGCAAGTCTCCCCACTGCCCTACCAACTT...TGCATTAGTAGAAGCCACCTGGCCTGCGGGAGGCTGTGTACACTTGGCCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp CCACATTCACCTTCTCGAAGCAGAGGTCAGGGGCAGGTCGGGCTCCGGGTCCCCTTGTTACAGACCCCATaGCCATTGCACTTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: PHSPSRSRGQGQVGLRVPLLQTP*PLHFFP
Trigger: TGGGAAGAAGTGCAATGGCCATGGGGTCTGTAACAA...GGGGACCCGGAGCCCGACCTGCCCCTGACCTCTGCTTCGAGAAGGTGAATGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CCA 90 bp CGCACAGTGGACGGTGTGAGAGGACGCGTTGGGGGTGACTTTGGAAATGTGGGCCAGCCCGGCAGGCAGTaGCAGTTCTGGTTGTTGTTA +
Preference number: 4 (lower is better)
Translates to: RTVDGVRGRVGGDFGNVGQPGRQ*QFWLLL
Trigger: TAACAACAACCAGAACTGCCACTGCCTGCCGGGCTG...GCCCACATTTCCAAAGTCACCCCCAACGCGTCCTCTCACACCGTCCACTGTGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CCA 90 bp CAGCATGAGGACCGCCAGCACCAAGATGGCCACCAACACTCCAGCTACCACAGGACCTTTCGCTTGCCCTaGGGCGTCTGCAGCTTGAAA +
Preference number: 4 (lower is better)
Translates to: QHEDRQHQDGHQHSSYHRTFRLP*GVCSLK
Trigger: TTTCAAGCTGCAGACGCCCCAGGGCAAGCGAAAGGT...CCTGTGGTAGCTGGAGTGTTGGTGGCCATCTTGGTGCTGGCGGTCCTCATGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CCA 90 bp GAGGACGCGTTGGGGGTGACTTTGGAAATGTGGGCTTGGATTCTACAGAACCTCGGGGCGGCCGAGGCCTaGAGAAGTCCTGGGAAACGA +
Preference number: 4 (lower is better)
Translates to: EDALGVTLEMWAWILQNLGAAEA*RSPGKR
Trigger: TCGTTTCCCAGGACTTCTCCAGGCCTCGGCCGCCCC...GAGGTTCTGTAGAATCCAAGCCCACATTTCCAAAGTCACCCCCAACGCGTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CCA 90 bp GGGGGTGACTTTGGAAATGTGGGCTTGGATTCTACAGAACCTCTCCTTCGCAGGCCTGCGGCCTGGCACTaGGTTTGCCGGGAGTGCCTT +
Preference number: 4 (lower is better)
Translates to: GGDFGNVGLDSTEPLLRRPAAWH*VCRECL
Trigger: AAGGCACTCCCGGCAAACCCAGTGCCAGGCCGCAGG...CCTGCGAAGGAGAGGTTCTGTAGAATCCAAGCCCACATTTCCAAAGTCACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CCA 90 bp GGCCAGGTGGCTTCTACTAATGCACTTCCTTGCTCTTCACAACAACCTGATGGGATGCACCTCCTGGCCTaGGGAGGCTCCTGCGGCCTG +
Preference number: 4 (lower is better)
Translates to: GQVASTNALPCSSQQPDGMHLLA*GGSCGL
Trigger: CAGGCCGCAGGAGCCTCCCCAGGCCAGGAGGTGCAT...CCCATCAGGTTGTTGTGAAGAGCAAGGAAGTGCATTAGTAGAAGCCACCTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp GTTGGGGGTGACTTTGGAAATGTGGGCTTGGATTCTACAGAACCTCTCCTTCGCTGGGGATGCACCTCCTaGCCTGGGGAGGCTCCTGCG +
Preference number: 4 (lower is better)
Translates to: VGGDFGNVGLDSTEPLLRWGCTS*PGEAPA
Trigger: CGCAGGAGCCTCCCCAGGCCAGGAGGTGCATCCCCA...GCGAAGGAGAGGTTCTGTAGAATCCAAGCCCACATTTCCAAAGTCACCCCCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CCA 90 bp CAATGCCTCGTGGGAATACAGCATGGTCAGCCAGCTTCTTCACCTCATCCCTTTTGGGGATGCACCTCCTaGCCTGGGGAGGCTCCTGCG +
Preference number: 4 (lower is better)
Translates to: QCLVGIQHGQPASSPHPFWGCTS*PGEAPA
Trigger: CGCAGGAGCCTCCCCAGGCCAGGAGGTGCATCCCCA...AAAGGGATGAGGTGAAGAAGCTGGCTGACCATGCTGTATTCCCACGAGGCATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp TGTGGGCTTGGATTCTACAGAACCTCTCCTTCGCAGGCTCCCCTGGGGAAGGGGGGTCTCTTTCTGGTGTaGTTCCAGGGAGGGTGGACT +
Preference number: 4 (lower is better)
Translates to: CGLGFYRTSPSQAPLGKGGLFLV*FQGGWT
Trigger: AGTCCACCCTCCCTGGAACCACACCAGAAAGAGACC...CCCCTTCCCCAGGGGAGCCTGCGAAGGAGAGGTTCTGTAGAATCCAAGCCCACA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp CGCACAGTGGACGGTGTGAGAGGACGCGTTGGGGGTGACTTTGGAAATGTGGGCCTTCCATACCCTCTTTaGGGCAAGTGCTGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: RTVDGVRGRVGGDFGNVGLPYPL*GKCCQR
Trigger: CCTCTGGCAGCACTTGCCCCAAAGAGGGTATGGAAG...GCCCACATTTCCAAAGTCACCCCCAACGCGTCCTCTCACACCGTCCACTGTGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517374.5
CDS-3UTR TCA 90 bp CAGAAGAAGTACGAGGAGGGGCCAAGTGTACACAGCCTCCCGCAGGCCAGGTGGTCTCACGGGGCTTTCTaGAGTCTTCCACTGAGGTAT +
Preference number: 4 (lower is better)
Translates to: QKKYEEGPSVHSLPQARWSHGAF*SLPLRY
Trigger: ATACCTCAGTGGAAGACTTCAGAAAGCCCCGTGAGA...CCACCTGGCCTGCGGGAGGCTGTGTACACTTGGCCCCTCCTCGTACTTCTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR TCA 90 bp AGCCACACAGAAGAAGTACGAGGAGGGGCCAAGTGTACACAGCCTCCCGCAGGCTTCCCGGGGGCGGCTTaGGATGTTCAGATCTGTAAA +
Preference number: 4 (lower is better)
Translates to: SHTEEVRGGAKCTQPPAGFPGAA*DVQICK
Trigger: TTTACAGATCTGAACATCTCAAGCCGCCCCCGGGAA...GCCTGCGGGAGGCTGTGTACACTTGGCCCCTCCTCGTACTTCTTCTGTGTGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR TCA 90 bp CGCACAGTGGACGGTGTGAGAGGACGCGTTGGGGGTGACTTTGGAAATGTGGGCGTCTGTTGTGTAAACTaGAGAGCCCAGTCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: RTVDGVRGRVGGDFGNVGVCCVN*RAQSLV
Trigger: CACCAGGGACTGGGCTCTTCAGTTTACACAACAGAC...GCCCACATTTCCAAAGTCACCCCCAACGCGTCCTCTCACACCGTCCACTGTGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR TCA 90 bp GAGGGGCCAAGTGTACACAGCCTCCCGCAGGCCAGGTGGCTTCTACTAATGCACGTCTGTTGTGTAAACTaGAGAGCCCAGTCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: EGPSVHSLPQARWLLLMHVCCVN*RAQSLV
Trigger: CACCAGGGACTGGGCTCTTCAGTTTACACAACAGAC...GTGCATTAGTAGAAGCCACCTGGCCTGCGGGAGGCTGTGTACACTTGGCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR TCA 90 bp TCGCTTGCCCTGGGGCGTCTGCAGCTTGAAAGTTGGGTTGGCATGACCAGTCCCGTCTGTTGTGTAAACTaGAGAGCCCAGTCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: SLALGRLQLESWVGMTSPVCCVN*RAQSLV
Trigger: CACCAGGGACTGGGCTCTTCAGTTTACACAACAGAC...GGGACTGGTCATGCCAACCCAACTTTCAAGCTGCAGACGCCCCAGGGCAAGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR TCA 90 bp CGCACAGTGGACGGTGTGAGAGGACGCGTTGGGGGTGACTTTGGAAATGTGGGCGGAGAGCTGAGGGCTTaGGTTGGCCTAGTTTGTTGT +
Preference number: 4 (lower is better)
Translates to: RTVDGVRGRVGGDFGNVGGELRA*VGLVCC
Trigger: ACAACAAACTAGGCCAACTCAAGCCCTCAGCTCTCC...GCCCACATTTCCAAAGTCACCCCCAACGCGTCCTCTCACACCGTCCACTGTGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR TCA 90 bp CACAGAAGAAGTACGAGGAGGGGCCAAGTGTACACAGCCTCCCGCAGGCCAGGTGGAGAGCTGAGGGCTTaGGTTGGCCTAGTTTGTTGT +
Preference number: 4 (lower is better)
Translates to: HRRSTRRGQVYTASRRPGGELRA*VGLVCC
Trigger: ACAACAAACTAGGCCAACTCAAGCCCTCAGCTCTCC...ACCTGGCCTGCGGGAGGCTGTGTACACTTGGCCCCTCCTCGTACTTCTTCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR TCA 90 bp GAGGAAACAGACTCAAGAGGGACTTGCTCAGGGTCCCTCCCCAGGTCAGGTGCACCAGTCCCGCTGTTCTaGGAAACCCTGAAGGGACAA +
Preference number: 4 (lower is better)
Translates to: EETDSRGTCSGSLPRSGAPVPLF*ETLKGQ
Trigger: TTGTCCCTTCAGGGTTTCTCAGAACAGCGGGACTGG...TGCACCTGACCTGGGGAGGGACCCTGAGCAAGTCCCTCTTGAGTCTGTTTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR TCA 90 bp GACACATACAAACGCACAGTGGACGGTGTGAGAGGACGCGTTGGGGGTGACTTTGGGGCTTGCTGGCCTTaGGCATCTCCATCAGCACCT +
Preference number: 4 (lower is better)
Translates to: DTYKRTVDGVRGRVGGDFGACWP*ASPSAP
Trigger: AGGTGCTGATGGAGATGCTCAAGGCCAGCAAGCCCC...AAAGTCACCCCCAACGCGTCCTCTCACACCGTCCACTGTGCGTTTGTATGTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR TCA 90 bp GTTGGGGGTGACTTTGGAAATGTGGGCTTGGATTCTACAGAACCTCTCCTTCGCGCACAGTGGACGGTGTaGGAGGACGCGTTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: VGGDFGNVGLDSTEPLLRAQWTV*EDALGV
Trigger: CACCCCCAACGCGTCCTCTCACACCGTCCACTGTGC...GCGAAGGAGAGGTTCTGTAGAATCCAAGCCCACATTTCCAAAGTCACCCCCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR TCA 90 bp AGCCACACAGAAGAAGTACGAGGAGGGGCCAAGTGTACACAGCCTCCCGCAGGCCATCCCTTTCTGACCTaGCTGCCAAGACTGGCAAAC +
Preference number: 4 (lower is better)
Translates to: SHTEEVRGGAKCTQPPAGHPFLT*LPRLAN
Trigger: GTTTGCCAGTCTTGGCAGTCAGGTCAGAAAGGGATG...GCCTGCGGGAGGCTGTGTACACTTGGCCCCTCCTCGTACTTCTTCTGTGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR GCA 90 bp TTCCCATGGCTTTCTTGGGTGTCCAGCAGAGCTGTTATACACGTGGTTAACACAGCCATACCTGCCCACTaGCCGGCGGTGGAGGCGCGT +
Preference number: 4 (lower is better)
Translates to: FPWLSWVSSRAVIHVVNTAIPAH*PAVEAR
Trigger: ACGCGCCTCCACCGCCGGGCAGTGGGCAGGTATGGC...TGTGTTAACCACGTGTATAACAGCTCTGCTGGACACCCAAGAAAGCCATGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR GCA 90 bp CCGGCACTGGATCTGCCTCCCATTCATGATGATAGTGGTGTCAATGGGCACCGCGCTGCAGCTTGGGGCTaGCTTCCTCACTTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: PALDLPPIHDDSGVNGHRAAAWG*LPHFLL
Trigger: CAAGAGGAAGTGAGGAAGGCAGCCCCAAGCTGCAGC...GCGGTGCCCATTGACACCACTATCATCATGAATGGGAGGCAGATCCAGTGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR GCA 90 bp ACACCTAGAGGCCATCAGATCATAGTCCCTCTGGGCTTCCAAGGAAGCCGAGGAGTGCCCAGTGGCAGCTaGCATGATGCACCCACCATC +
Preference number: 4 (lower is better)
Translates to: TPRGHQIIVPLGFQGSRGVPSGS*HDAPTI
Trigger: GATGGTGGGTGCATCATGGCAGCTGCCACTGGGCAC...TCCTCGGCTTCCTTGGAAGCCCAGAGGGACTATGATCTGATGGCCTCTAGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR GCA 90 bp CAGCATGAGGACCGCCAGCACCAAGATGGCCACCAACACTCCAGCTACCACAGGATTCCACCACCTGACTaGAGATACCTGTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: QHEDRQHQDGHQHSSYHRIPPPD*RYLSSS
Trigger: GGAGCTGGACAGGTATCTGCAGTCAGGTGGTGGAAT...CCTGTGGTAGCTGGAGTGTTGGTGGCCATCTTGGTGCTGGCGGTCCTCATGCTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR GCA 90 bp CCTTGCTCTTCACAACAACCTGATGGGGCTGGTACTACTGCTCATCATAGCCTCTCACACTGCCTGGCCTaGTCGCGGCACAGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: PCSSQQPDGAGTTAHHSLSHCLA*SRHRVP
Trigger: TGGGACCCTGTGCCGCGAGCAGGCCAGGCAGTGTGA...GAGGCTATGATGAGCAGTAGTACCAGCCCCATCAGGTTGTTGTGAAGAGCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR GCA 90 bp CACATTGCCCTGGATCCCAGACACATACAAACGCACAGTGGACGGTGTGAGAGGGGCAGTGGGGAGACTTaGCCGTACAGAACTCCGGGA +
Preference number: 4 (lower is better)
Translates to: HIALDPRHIQTHSGRCERGSGET*PYRTPG
Trigger: TCCCGGAGTTCTGTACGGGCAAGTCTCCCCACTGCC...CCTCTCACACCGTCCACTGTGCGTTTGTATGTGTCTGGGATCCAGGGCAATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR GCA 90 bp AAGTCAATGACCAGCCTGCTCCCTCGTGTGTACTTTGTAAATAGCTGGGCTCCCGCCCACTGTCGATACTaGCCCCGTGGCCCGGTGTGT +
Preference number: 4 (lower is better)
Translates to: KSMTSLLPRVYFVNSWAPAHCRY*PRGPVC
Trigger: ACACACCGGGCCACGGGGGCAGTATCGACAGTGGGC...GGGAGCCCAGCTATTTACAAAGTACACACGAGGGAGCAGGCTGGTCATTGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR GCA 90 bp GTTGGGGGTGACTTTGGAAATGTGGGCTTGGATTCTACAGAACCTCTCCTTCGCGTGAGCTGGCAGTGGTaGAGGTGGGGACCCACCACG +
Preference number: 4 (lower is better)
Translates to: VGGDFGNVGLDSTEPLLRVSWQW*RWGPTT
Trigger: CGTGGTGGGTCCCCACCTGCACCACTGCCAGCTCAC...GCGAAGGAGAGGTTCTGTAGAATCCAAGCCCACATTTCCAAAGTCACCCCCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR GCA 90 bp TGTGGGCTTGGATTCTACAGAACCTCTCCTTCGCAGGCTCCCCTGGGGAAGGGGACGTGGCTTGTCACATaGAGCCATACAGCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: CGLGFYRTSPSQAPLGKGTWLVT*SHTARS
Trigger: GCTTCTGGCTGTATGGCTGCATGTGACAAGCCACGT...CCCCTTCCCCAGGGGAGCCTGCGAAGGAGAGGTTCTGTAGAATCCAAGCCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR GCA 90 bp TCCCAGAAATGGGTCTGTTCTCTGCTCAGAGGGCAACGGTCCAGCCCGAAGTCACTGTTCCAGTGCAGCTaGTGCTGGCTGCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: SQKWVCSLLRGQRSSPKSLFQCS*CWLPSP
Trigger: TGGAGAAGGCAGCCAGCAGCAGCTGCACTGGAACAG...TGACTTCGGGCTGGACCGTTGCCCTCTGAGCAGAGAACAGACCCATTTCTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR GCA 90 bp ACCCCAGGAGTGAATGGATGGCTTCTGCAAGCGAAGTGCTGGCCTGAGGGGCTTATTGGAAAGGCGTATTaGAGGAGGTGGGGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: TPGVNGWLLQAKCWPEGLIGKAY*RRWGGA
Trigger: AGCCCCTCCCCACCTCCTGCAATACGCCTTTCCAAT...AAGCCCCTCAGGCCAGCACTTCGCTTGCAGAAGCCATCCATTCACTCCTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp ATCATAGCCTCTGTACAAATGAGGAAACAGACTCAAGAGGGACTTGCTCAGGGTCGCCCCCTGGCATGGTaGCGGCGGCCCTTAGCGCTC +
Preference number: 4 (lower is better)
Translates to: IIASVQMRKQTQEGLAQGRPLAW*RRPLAL
Trigger: GAGCGCTAAGGGCCGCCGCCACCATGCCAGGGGGCG...ACCCTGAGCAAGTCCCTCTTGAGTCTGTTTCCTCATTTGTACAGAGGCTATGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp CTTCTACTAATGCACTTCCTTGCTCTTCACAACAACCTGATGGGGCTGGTACTACTGCGCCCCCTGGCATaGTGGCGGCGGCCCTTAGCG +
Preference number: 4 (lower is better)
Translates to: LLLMHFLALHNNLMGLVLLRPLA*WRRPLA
Trigger: CGCTAAGGGCCGCCGCCACCATGCCAGGGGGCGCAG...TAGTACCAGCCCCATCAGGTTGTTGTGAAGAGCAAGGAAGTGCATTAGTAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp CATCAGCATGAGGACCGCCAGCACCAAGATGGCCACCAACACTCCAGCTACCACGTTCATGCTGCAGCTTaGGGCTGCCTTCCTCACTTC +
Preference number: 4 (lower is better)
Translates to: HQHEDRQHQDGHQHSSYHVHAAA*GCLPHF
Trigger: GAAGTGAGGAAGGCAGCCCCAAGCTGCAGCATGAAC...GTGGTAGCTGGAGTGTTGGTGGCCATCTTGGTGCTGGCGGTCCTCATGCTGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CCA 90 bp TCTCCAGGTGCTTTGCAAAAACCGTCCTATCTAGCAAAGCACCACACGGCCCTCGAGCCCAGTCCCTGGTaGTGGGCTTGGAGTGCTCGA +
Preference number: 4 (lower is better)
Translates to: SPGALQKPSYLAKHHTALEPSPW*WAWSAR
Trigger: TCGAGCACTCCAAGCCCACCACCAGGGACTGGGCTC...GAGGGCCGTGTGGTGCTTTGCTAGATAGGACGGTTTTTGCAAAGCACCTGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp CTCCCGCAGGCCAGGTGGCTTCTACTAATGCACTTCCTTGCTCTTCACAACAACGAGCCCAGTCCCTGGTaGTGGGCTTGGAGTGCTCGA +
Preference number: 4 (lower is better)
Translates to: LPQARWLLLMHFLALHNNEPSPW*WAWSAR
Trigger: TCGAGCACTCCAAGCCCACCACCAGGGACTGGGCTC...GTTGTTGTGAAGAGCAAGGAAGTGCATTAGTAGAAGCCACCTGGCCTGCGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp ACACCTAGAGGCCATCAGATCATAGTCCCTCTGGGCTTCCAAGGAAGCCGAGGAGAAGAGCCCAGTCCCTaGTGGTGGGCTTGGAGTGCT +
Preference number: 4 (lower is better)
Translates to: TPRGHQIIVPLGFQGSRGEEPSP*WWAWSA
Trigger: AGCACTCCAAGCCCACCACCAGGGACTGGGCTCTTC...TCCTCGGCTTCCTTGGAAGCCCAGAGGGACTATGATCTGATGGCCTCTAGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp CTCGCGGCACAGGGTCCCAGGAGCCAACAGCTTACACTGGTGGCAGCAGGAGCCATGCCCGTGATTAATTaGGCGTTGTCATGGTACTTC +
Preference number: 4 (lower is better)
Translates to: LAAQGPRSQQLTLVAAGAMPVIN*ALSWYF
Trigger: GAAGTACCATGACAACGCCCAATTAATCACGGGCAT...GGCTCCTGCTGCCACCAGTGTAAGCTGTTGGCTCCTGGGACCCTGTGCCGCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CCA 90 bp TGCAGGGGCAGGACTGAAGCCACCACAGCTCAGGATTCTAAGAATCACCTTTCAGGGCCAGGCCGATGGTaGTGCCGTGGAAGGACATGC +
Preference number: 4 (lower is better)
Translates to: CRGRTEATTAQDSKNHLSGPGRW*CRGRTC
Trigger: GCATGTCCTTCCACGGCACCACCATCGGCCTGGCCC...TGAAAGGTGATTCTTAGAATCCTGAGCTGTGGTGGCTTCAGTCCTGCCCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp GGGACCTTTCCAGTTGGCGTTCCCATGGCTTTCTTGGGTGTCCAGCAGAGCTGTTGGCAGCCACGCCAATaGCATTCTCGGAGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: GTFPVGVPMAFLGVQQSCWQPRQ*HSRSGP
Trigger: TGGACCACTCCGAGAATGCCATTGGCGTGGCTGCCA...ACAGCTCTGCTGGACACCCAAGAAAGCCATGGGAACGCCAACTGGAAAGGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp CCCTTCCCTGCTAAGGCAGCAGCACAGTCCATAGTTTTCTCAATGCCTCGTGGGCACCATCAGCCGCACTaGCCGAGCAGCAATCTGCAG +
Preference number: 4 (lower is better)
Translates to: PFPAKAAAQSIVFSMPRGHHQPH*PSSNLQ
Trigger: CTGCAGATTGCTGCTCGGCCAGTGCGGCTGATGGTG...CCCACGAGGCATTGAGAAAACTATGGACTGTGCTGCTGCCTTAGCAGGGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp GGGGACCTTTCCAGTTGGCGTTCCCATGGCTTTCTTGGGTGTCCAGCAGAGCTGAAGTTGGTAGGGCAGTaGGGAGACTTGCCCGTACAG +
Preference number: 4 (lower is better)
Translates to: GDLSSWRSHGFLGCPAELKLVGQ*GDLPVQ
Trigger: CTGTACGGGCAAGTCTCCCCACTGCCCTACCAACTT...CAGCTCTGCTGGACACCCAAGAAAGCCATGGGAACGCCAACTGGAAAGGTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CCA 90 bp AAACGCACAGTGGACGGTGTGAGAGGACGCGTTGGGGGTGACTTTGGAAATGTGTGGGTGCCCCGGCACTaGATCTGCCTCCCATTCATG +
Preference number: 4 (lower is better)
Translates to: KRTVDGVRGRVGGDFGNVWVPRH*ICLPFM
Trigger: CATGAATGGGAGGCAGATCCAGTGCCGGGGCACCCA...CACATTTCCAAAGTCACCCCCAACGCGTCCTCTCACACCGTCCACTGTGCGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CCA 90 bp AAACGCACAGTGGACGGTGTGAGAGGACGCGTTGGGGGTGACTTTGGAAATGTGTCGATACTGCCCCCGTaGCCCGGTGTGTTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: KRTVDGVRGRVGGDFGNVSILPP*PGVLQK
Trigger: CTTCTGCAACACACCGGGCCACGGGGGCAGTATCGA...CACATTTCCAAAGTCACCCCCAACGCGTCCTCTCACACCGTCCACTGTGCGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CCA 90 bp CTTTGGAAATGTGGGCTTGGATTCTACAGAACCTCTCCTTCGCAGGCTCCCCTGACCACGCAGATAATCTaGAGGGGGCCGGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: LWKCGLGFYRTSPSQAPLTTQII*RGPGRR
Trigger: CCTCCTCCCCGGCCCCCTCCAGATTATCTGCGTGGT...CAGGGGAGCCTGCGAAGGAGAGGTTCTGTAGAATCCAAGCCCACATTTCCAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CCA 90 bp GACACATACAAACGCACAGTGGACGGTGTGAGAGGACGCGTTGGGGGTGACTTTTGGCAGTGGTGCAGGTaGGGACCCACCACGCAGATA +
Preference number: 4 (lower is better)
Translates to: DTYKRTVDGVRGRVGGDFWQWCR*GPTTQI
Trigger: TATCTGCGTGGTGGGTCCCCACCTGCACCACTGCCA...AAAGTCACCCCCAACGCGTCCTCTCACACCGTCCACTGTGCGTTTGTATGTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CCA 90 bp ACTGCCAAGACTGGCAAACTGAGACTGTCAGCCACACAGAAGAAGTACGAGGAGGGGGCGGCCGAGGCCTaGAGAAGTCCTGGGAAACGA +
Preference number: 4 (lower is better)
Translates to: TAKTGKLRLSATQKKYEEGAAEA*RSPGKR
Trigger: TCGTTTCCCAGGACTTCTCCAGGCCTCGGCCGCCCC...CTCCTCGTACTTCTTCTGTGTGGCTGACAGTCTCAGTTTGCCAGTCTTGGCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp GCCAGGTGGCTTCTACTAATGCACTTCCTTGCTCTTCACAACAACCTGATGGGGCCTGCGGCCTGGCACTaGGTTTGCCGGGAGTGCCTT +
Preference number: 4 (lower is better)
Translates to: ARWLLLMHFLALHNNLMGPAAWH*VCRECL
Trigger: AAGGCACTCCCGGCAAACCCAGTGCCAGGCCGCAGG...CCCCATCAGGTTGTTGTGAAGAGCAAGGAAGTGCATTAGTAGAAGCCACCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp GAAAATTCACATTGCCCTGGATCCCAGACACATACAAACGCACAGTGGACGGTGTGGGGATGCACCTCCTaGCCTGGGGAGGCTCCTGCG +
Preference number: 4 (lower is better)
Translates to: ENSHCPGSQTHTNAQWTVWGCTS*PGEAPA
Trigger: CGCAGGAGCCTCCCCAGGCCAGGAGGTGCATCCCCA...CACCGTCCACTGTGCGTTTGTATGTGTCTGGGATCCAGGGCAATGTGAATTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CCA 90 bp GGGGGTGACTTTGGAAATGTGGGCTTGGATTCTACAGAACCTCTCCTTCGCAGGCTGCAAGCGAAGTGCTaGCCTGAGGGGCTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: GGDFGNVGLDSTEPLLRRLQAKC*PEGLAG
Trigger: GCCAGCAAGCCCCTCAGGCCAGCACTTCGCTTGCAG...CCTGCGAAGGAGAGGTTCTGTAGAATCCAAGCCCACATTTCCAAAGTCACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR TCA 90 bp GGGGACCTTTCCAGTTGGCGTTCCCATGGCTTTCTTGGGTGTCCAGCAGAGCTGTTCCCGGGGGCGGCTTaGGATGTTCAGATCTGTAAA +
Preference number: 4 (lower is better)
Translates to: GDLSSWRSHGFLGCPAELFPGAA*DVQICK
Trigger: TTTACAGATCTGAACATCTCAAGCCGCCCCCGGGAA...CAGCTCTGCTGGACACCCAAGAAAGCCATGGGAACGCCAACTGGAAAGGTCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR TCA 90 bp AAACGCACAGTGGACGGTGTGAGAGGACGCGTTGGGGGTGACTTTGGAAATGTGACTGCTCCTGGTAGGTaGGGCACATGCCGTTGTAGC +
Preference number: 4 (lower is better)
Translates to: KRTVDGVRGRVGGDFGNVTAPGR*GTCRCS
Trigger: GCTACAACGGCATGTGCCTCACCTACCAGGAGCAGT...CACATTTCCAAAGTCACCCCCAACGCGTCCTCTCACACCGTCCACTGTGCGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR TCA 90 bp CTTTGGAAATGTGGGCTTGGATTCTACAGAACCTCTCCTTCGCAGGCTCCCCTGCGGGCCTCAGAGCTCTaGCACTGGATCTTCCCACAC +
Preference number: 4 (lower is better)
Translates to: LWKCGLGFYRTSPSQAPLRASEL*HWIFPH
Trigger: GTGTGGGAAGATCCAGTGTCAGAGCTCTGAGGCCCG...CAGGGGAGCCTGCGAAGGAGAGGTTCTGTAGAATCCAAGCCCACATTTCCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR TCA 90 bp TCATCCCTTTCTGACCTGACTGCCAAGACTGGCAAACTGAGACTGTCAGCCACATCCGTCCTCTCTATTTaGGACCCGGGCCCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: SSLSDLTAKTGKLRLSATSVLSI*DPGPGE
Trigger: CTCCCCAGGGCCCGGGTCTCAAATAGAGAGGACGGA...TGTGGCTGACAGTCTCAGTTTGCCAGTCTTGGCAGTCAGGTCAGAAAGGGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR TCA 90 bp TATCTAGCAAAGCACCACACGGCCCTCCTTCCCTGCTGCAGGGAAGACAGGAGCTTTCTGCCTGGGCTTTaGGACGCTTGCAGATCTTGC +
Preference number: 4 (lower is better)
Translates to: YLAKHHTALLPCCREDRSFLPGL*DACRSC
Trigger: GCAAGATCTGCAAGCGTCTCAAAGCCCAGGCAGAAA...GCTCCTGTCTTCCCTGCAGCAGGGAAGGAGGGCCGTGTGGTGCTTTGCTAGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR TCA 90 bp TTTCCAGTTGGCGTTCCCATGGCTTTCTTGGGTGTCCAGCAGAGCTGTTATACAGGGCCATCCTCAGCCTaGGCCAGCAAACAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: FPVGVPMAFLGVQQSCYTGPSSA*ASKQPL
Trigger: GAGGGGCTGTTTGCTGGCTCAGGCTGAGGATGGCCC...TGTATAACAGCTCTGCTGGACACCCAAGAAAGCCATGGGAACGCCAACTGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR GCA 90 bp TCAGCCACACAGAAGAAGTACGAGGAGGGGCCAAGTGTACACAGCCTCCCGCAGCTGTCTCCCTCACCGTaGCGTGGTAAAAGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: SATQKKYEEGPSVHSLPQLSPSP*RGKSSD
Trigger: ATCACTGCTTTTACCACGGCACGGTGAGGGAGACAG...CTGCGGGAGGCTGTGTACACTTGGCCCCTCCTCGTACTTCTTCTGTGTGGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR GCA 90 bp CTGGGCAAGCAGCTTGCGCCTCCAACTGAGAAAGGACCAGAGGGTAGAATATGGGTGGTGGGCTTGGAGTaGTCGAACCCACAGTTTCCC +
Preference number: 4 (lower is better)
Translates to: LGKQLAPPTEKGPEGRIWVVGLE*SNPQFP
Trigger: GGGAAACTGTGGGTTCGAGCACTCCAAGCCCACCAC...CCATATTCTACCCTCTGGTCCTTTCTCAGTTGGAGGCGCAAGCTGCTTGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR GCA 90 bp GAGGGGCCAAGTGTACACAGCCTCCCGCAGGCCAGGTGGCTTCTACTAATGCACCTTCCCTTTTCATCCTaGGAGGTCGCTTCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: EGPSVHSLPQARWLLLMHLPFSS*EVASWS
Trigger: AGACCAAGAAGCGACCTCGCAGGATGAAAAGGGAAG...GTGCATTAGTAGAAGCCACCTGGCCTGCGGGAGGCTGTGTACACTTGGCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR GCA 90 bp CAGCATGAGGACCGCCAGCACCAAGATGGCCACCAACACTCCAGCTACCACAGGCTTCCCTTTTCATCCTaGGAGGTCGCTTCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: QHEDRQHQDGHQHSSYHRLPFSS*EVASWS
Trigger: AGACCAAGAAGCGACCTCGCAGGATGAAAAGGGAAG...CCTGTGGTAGCTGGAGTGTTGGTGGCCATCTTGGTGCTGGCGGTCCTCATGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR GCA 90 bp CCTGCTAAGGCAGCAGCACAGTCCATAGTTTTCTCAATGCCTCGTGGGAATACACCAGGCCGATGGTGGTaGCGTGGAAGGACATGCCCG +
Preference number: 4 (lower is better)
Translates to: PAKAAAQSIVFSMPRGNTPGRWW*RGRTCP
Trigger: CGGGCATGTCCTTCCACGGCACCACCATCGGCCTGG...TGTATTCCCACGAGGCATTGAGAAAACTATGGACTGTGCTGCTGCCTTAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR GCA 90 bp CAAGACTGGCAAACTGAGACTGTCAGCCACACAGAAGAAGTACGAGGAGGGGCCACTTTGGGAAAGGGGTaGCCAGTGGCAGCTGCCATG +
Preference number: 4 (lower is better)
Translates to: QDWQTETVSHTEEVRGGATLGKG*PVAAAM
Trigger: CATGGCAGCTGCCACTGGGCACCCCTTTCCCAAAGT...GGCCCCTCCTCGTACTTCTTCTGTGTGGCTGACAGTCTCAGTTTGCCAGTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR GCA 90 bp TGGTACTTCTGGGCAAGCAGCTTGCGCCTCCAACTGAGAAAGGACCAGAGGGTAACTTTGGGAAAGGGGTaGCCAGTGGCAGCTGCCATG +
Preference number: 4 (lower is better)
Translates to: WYFWASSLRLQLRKDQRVTLGKG*PVAAAM
Trigger: CATGGCAGCTGCCACTGGGCACCCCTTTCCCAAAGT...TACCCTCTGGTCCTTTCTCAGTTGGAGGCGCAAGCTGCTTGCCCAGAAGTACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR GCA 90 bp TGTGGGCTTGGATTCTACAGAACCTCTCCTTCGCAGGCTCCCCTGGGGAAGGGGGAGGTGTTCCTGCACTaGCCCTCAAAGCAAATATGG +
Preference number: 4 (lower is better)
Translates to: CGLGFYRTSPSQAPLGKGEVFLH*PSKQIW
Trigger: CCATATTTGCTTTGAGGGGCAGTGCAGGAACACCTC...CCCCTTCCCCAGGGGAGCCTGCGAAGGAGAGGTTCTGTAGAATCCAAGCCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR GCA 90 bp GAGGAAACAGACTCAAGAGGGACTTGCTCAGGGTCCCTCCCCAGGTCAGGTGCAAGACCCCATGGCCATTaGACTTCTTCCCACAGCCTT +
Preference number: 4 (lower is better)
Translates to: EETDSRGTCSGSLPRSGARPHGH*TSSHSL
Trigger: AAGGCTGTGGGAAGAAGTGCAATGGCCATGGGGTCT...TGCACCTGACCTGGGGAGGGACCCTGAGCAAGTCCCTCTTGAGTCTGTTTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR GCA 90 bp CCTGCTAAGGCAGCAGCACAGTCCATAGTTTTCTCAATGCCTCGTGGGAATACAGCCCACTGTCGATACTaGCCCCGTGGCCCGGTGTGT +
Preference number: 4 (lower is better)
Translates to: PAKAAAQSIVFSMPRGNTAHCRY*PRGPVC
Trigger: ACACACCGGGCCACGGGGGCAGTATCGACAGTGGGC...TGTATTCCCACGAGGCATTGAGAAAACTATGGACTGTGCTGCTGCCTTAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR GCA 90 bp TTTCCAGTTGGCGTTCCCATGGCTTTCTTGGGTGTCCAGCAGAGCTGTTATACAGCCTGGCACTGGGTTTaGCGGGAGTGCCTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: FPVGVPMAFLGVQQSCYTAWHWV*RECLLG
Trigger: CCCCAGAAGGCACTCCCGGCAAACCCAGTGCCAGGC...TGTATAACAGCTCTGCTGGACACCCAAGAAAGCCATGGGAACGCCAACTGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR GCA 90 bp CCCAGAAATGGGTCTGTTCTCTGCTCAGAGGGCAACGGTCCAGCCCGAAGTCAAAGAGGCGGCCAGACATaGTTCTTCAGGGTTCCATGG +
Preference number: 4 (lower is better)
Translates to: PRNGSVLCSEGNGPARSQRGGQT*FFRVPW
Trigger: CCATGGAACCCTGAAGAAGCATGTCTGGCCGCCTCT...TTGACTTCGGGCTGGACCGTTGCCCTCTGAGCAGAGAACAGACCCATTTCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR GCA 90 bp CACATTGCCCTGGATCCCAGACACATACAAACGCACAGTGGACGGTGTGAGAGGCTTCTGCAAGCGAAGTaGTGGCCTGAGGGGCTTGCT +
Preference number: 4 (lower is better)
Translates to: HIALDPRHIQTHSGRCERLLQAK*WPEGLA
Trigger: AGCAAGCCCCTCAGGCCAGCACTTCGCTTGCAGAAG...CCTCTCACACCGTCCACTGTGCGTTTGTATGTGTCTGGGATCCAGGGCAATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR GCA 90 bp TGTACAAATGAGGAAACAGACTCAAGAGGGACTTGCTCAGGGTCCCTCCCCAGGTCTCAACTCTACACCTaGCCCCCTGGAGCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: CTNEETDSRGTCSGSLPRSQLYT*PPGALW
Trigger: CCAGAGGGCTCCAGGGGGGCAGGTGTAGAGTTGAGA...CCTGGGGAGGGACCCTGAGCAAGTCCCTCTTGAGTCTGTTTCCTCATTTGTACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp TGTGGGCTTGGATTCTACAGAACCTCTCCTTCGCAGGCTCCCCTGGGGAAGGGGGAGCTCAGCTTTGAGTaGATGCTTTTCTCTCACGGG +
Preference number: 4 (lower is better)
Translates to: CGLGFYRTSPSQAPLGKGELSFE*MLFSHG
Trigger: CCCGTGAGAGAAAAGCATCCACTCAAAGCTGAGCTC...CCCCTTCCCCAGGGGAGCCTGCGAAGGAGAGGTTCTGTAGAATCCAAGCCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp CACAGAAGAAGTACGAGGAGGGGCCAAGTGTACACAGCCTCCCGCAGGCCAGGTGAGCTCAGCTTTGAGTaGATGCTTTTCTCTCACGGG +
Preference number: 4 (lower is better)
Translates to: HRRSTRRGQVYTASRRPGELSFE*MLFSHG
Trigger: CCCGTGAGAGAAAAGCATCCACTCAAAGCTGAGCTC...ACCTGGCCTGCGGGAGGCTGTGTACACTTGGCCCCTCCTCGTACTTCTTCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp TCGCTTGCCCTGGGGCGTCTGCAGCTTGAAAGTTGGGTTGGCATGACCAGTCCCGAGCTCAGCTTTGAGTaGATGCTTTTCTCTCACGGG +
Preference number: 4 (lower is better)
Translates to: SLALGRLQLESWVGMTSPELSFE*MLFSHG
Trigger: CCCGTGAGAGAAAAGCATCCACTCAAAGCTGAGCTC...GGGACTGGTCATGCCAACCCAACTTTCAAGCTGCAGACGCCCCAGGGCAAGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CCA 90 bp ACCATCCATCTGGTAGAAGTTGGTAGGGCAGTGGGGAGACTTGCCCGTACAGAAGAAGAGCCCAGTCCCTaGTGGTGGGCTTGGAGTGCT +
Preference number: 4 (lower is better)
Translates to: TIHLVEVGRAVGRLARTEEEPSP*WWAWSA
Trigger: AGCACTCCAAGCCCACCACCAGGGACTGGGCTCTTC...TTCTGTACGGGCAAGTCTCCCCACTGCCCTACCAACTTCTACCAGATGGATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CCA 90 bp GGAGGGGCCAAGTGTACACAGCCTCCCGCAGGCCAGGTGGCTTCTACTAATGCAAATTGGGCGTTGTCATaGTACTTCTGGGCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: GGAKCTQPPAGQVASTNANWALS*YFWASS
Trigger: GCTGCTTGCCCAGAAGTACCATGACAACGCCCAATT...TGCATTAGTAGAAGCCACCTGGCCTGCGGGAGGCTGTGTACACTTGGCCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp ACACCTAGAGGCCATCAGATCATAGTCCCTCTGGGCTTCCAAGGAAGCCGAGGACCGATGGTGGTGCCGTaGAAGGACATGCCCGTGATT +
Preference number: 4 (lower is better)
Translates to: TPRGHQIIVPLGFQGSRGPMVVP*KDMPVI
Trigger: AATCACGGGCATGTCCTTCCACGGCACCACCATCGG...TCCTCGGCTTCCTTGGAAGCCCAGAGGGACTATGATCTGATGGCCTCTAGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp GGTGTGAGAGGACGCGTTGGGGGTGACTTTGGAAATGTGGGCTTGGATTCTACACACCATCAGCCGCACTaGCCGAGCAGCAATCTGCAG +
Preference number: 4 (lower is better)
Translates to: GVRGRVGGDFGNVGLDSTHHQPH*PSSNLQ
Trigger: CTGCAGATTGCTGCTCGGCCAGTGCGGCTGATGGTG...TGTAGAATCCAAGCCCACATTTCCAAAGTCACCCCCAACGCGTCCTCTCACACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp CCCCGGCACTGGATCTGCCTCCCATTCATGATGATAGTGGTGTCAATGGGCACCAAGTTGGTAGGGCAGTaGGGAGACTTGCCCGTACAG +
Preference number: 4 (lower is better)
Translates to: PRHWICLPFMMIVVSMGTKLVGQ*GDLPVQ
Trigger: CTGTACGGGCAAGTCTCCCCACTGCCCTACCAACTT...GGTGCCCATTGACACCACTATCATCATGAATGGGAGGCAGATCCAGTGCCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CCA 90 bp GGGGGTGACTTTGGAAATGTGGGCTTGGATTCTACAGAACCTCTCCTTCGCAGGTGGGTGCCCCGGCACTaGATCTGCCTCCCATTCATG +
Preference number: 4 (lower is better)
Translates to: GGDFGNVGLDSTEPLLRRWVPRH*ICLPFM
Trigger: CATGAATGGGAGGCAGATCCAGTGCCGGGGCACCCA...CCTGCGAAGGAGAGGTTCTGTAGAATCCAAGCCCACATTTCCAAAGTCACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CCA 90 bp CTGGGCAAGCAGCTTGCGCCTCCAACTGAGAAAGGACCAGAGGGTAGAATATGGAGTCATCACCAGCCCTaGGTCCAGCATGTCACCCTC +
Preference number: 4 (lower is better)
Translates to: LGKQLAPPTEKGPEGRIWSHHQP*VQHVTL
Trigger: GAGGGTGACATGCTGGACCCAGGGCTGGTGATGACT...CCATATTCTACCCTCTGGTCCTTTCTCAGTTGGAGGCGCAAGCTGCTTGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CCA 90 bp TGTGGGCTTGGATTCTACAGAACCTCTCCTTCGCAGGCTCCCCTGGGGAAGGGGAGGCAGTGGCAGTTCTaGTTGTTGTTACAGACCCCA +
Preference number: 4 (lower is better)
Translates to: CGLGFYRTSPSQAPLGKGRQWQF*LLLQTP
Trigger: TGGGGTCTGTAACAACAACCAGAACTGCCACTGCCT...CCCCTTCCCCAGGGGAGCCTGCGAAGGAGAGGTTCTGTAGAATCCAAGCCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CCA 90 bp ATAGCCTCTGTACAAATGAGGAAACAGACTCAAGAGGGACTTGCTCAGGGTCCCCAGGTGAGCTGGCAGTaGTGCAGGTGGGGACCCACC +
Preference number: 4 (lower is better)
Translates to: IASVQMRKQTQEGLAQGPQVSWQ*CRWGPT
Trigger: GGTGGGTCCCCACCTGCACCACTGCCAGCTCACCTG...GGGACCCTGAGCAAGTCCCTCTTGAGTCTGTTTCCTCATTTGTACAGAGGCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp TATCTAGCAAAGCACCACACGGCCCTCCTTCCCTGCTGCAGGGAAGACAGGAGCCCAGGAGTGAATGGATaGCTTCTGCAAGCGAAGTGC +
Preference number: 4 (lower is better)
Translates to: YLAKHHTALLPCCREDRSPGVNG*LLQAKC
Trigger: GCACTTCGCTTGCAGAAGCCATCCATTCACTCCTGG...GCTCCTGTCTTCCCTGCAGCAGGGAAGGAGGGCCGTGTGGTGCTTTGCTAGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp TGTGGGCTTGGATTCTACAGAACCTCTCCTTCGCAGGCTCCCCTGGGGAAGGGGAGGAAAGGTGGGGAATaGATCTCCACAGCAAGGATG +
Preference number: 4 (lower is better)
Translates to: CGLGFYRTSPSQAPLGKGRKGGE*ISTARM
Trigger: CATCCTTGCTGTGGAGATCCATTCCCCACCTTTCCT...CCCCTTCCCCAGGGGAGCCTGCGAAGGAGAGGTTCTGTAGAATCCAAGCCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp GGGACCTTTCCAGTTGGCGTTCCCATGGCTTTCTTGGGTGTCCAGCAGAGCTGTCAGTTGGCGTTCCCATaGCTTTCTTGGGTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: GTFPVGVPMAFLGVQQSCQLAFP*LSWVSS
Trigger: GCTGGACACCCAAGAAAGCCATGGGAACGCCAACTG...ACAGCTCTGCTGGACACCCAAGAAAGCCATGGGAACGCCAACTGGAAAGGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CCA 90 bp CAGAAGAAGTACGAGGAGGGGCCAAGTGTACACAGCCTCCCGCAGGCCAGGTGGCCTTGGCTTTTGTTCTaGAAGTTCAGTCCAGACCAC +
Preference number: 4 (lower is better)
Translates to: QKKYEEGPSVHSLPQARWPWLLF*KFSPDH
Trigger: GTGGTCTGGACTGAACTTCCAGAACAAAAGCCAAGG...CCACCTGGCCTGCGGGAGGCTGTGTACACTTGGCCCCTCCTCGTACTTCTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517905.1
3UTR CAA 72 bp GTGCCGTGGAAGGACATGCCCGTGATTAATTGGGCGTaGTCATGGTACTTCTGGGCAAGCAGCTTGCGCCTC +
Preference number: 4 (lower is better)
Translates to: VPWKDMPVINWA*SWYFWASSLRL
Trigger: GAGGCGCAAGCTGCTTGCCCAGAAGTACCATGACAACGCCCAATTAATCACGGGCATGTCCTTCCACGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR TCA 90 bp AGCCACACAGAAGAAGTACGAGGAGGGGCCAAGTGTACACAGCCTCCCGCAGGCTCCTGTTGCATCCATTaGACACTTTGGGAAAGGGGT +
Preference number: 4 (lower is better)
Translates to: SHTEEVRGGAKCTQPPAGSCCIH*TLWERG
Trigger: ACCCCTTTCCCAAAGTGTTCAATGGATGCAACAGGA...GCCTGCGGGAGGCTGTGTACACTTGGCCCCTCCTCGTACTTCTTCTGTGTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR TCA 90 bp GGTGTGAGAGGACGCGTTGGGGGTGACTTTGGAAATGTGGGCTTGGATTCTACAACTGCTCCTGGTAGGTaGGGCACATGCCGTTGTAGC +
Preference number: 4 (lower is better)
Translates to: GVRGRVGGDFGNVGLDSTTAPGR*GTCRCS
Trigger: GCTACAACGGCATGTGCCTCACCTACCAGGAGCAGT...TGTAGAATCCAAGCCCACATTTCCAAAGTCACCCCCAACGCGTCCTCTCACACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR TCA 90 bp CCTTGCTCTTCACAACAACCTGATGGGGCTGGTACTACTGCTCATCATAGCCTCCGGGCCTCAGAGCTCTaGCACTGGATCTTCCCACAC +
Preference number: 4 (lower is better)
Translates to: PCSSQQPDGAGTTAHHSLRASEL*HWIFPH
Trigger: GTGTGGGAAGATCCAGTGTCAGAGCTCTGAGGCCCG...GAGGCTATGATGAGCAGTAGTACCAGCCCCATCAGGTTGTTGTGAAGAGCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR TCA 90 bp GGTGTGAGAGGACGCGTTGGGGGTGACTTTGGAAATGTGGGCTTGGATTCTACAGGGGCGTCTGCAGCTTaGAAGTTGGGTTGGCATGAC +
Preference number: 4 (lower is better)
Translates to: GVRGRVGGDFGNVGLDSTGASAA*KLGWHD
Trigger: GTCATGCCAACCCAACTTTCAAGCTGCAGACGCCCC...TGTAGAATCCAAGCCCACATTTCCAAAGTCACCCCCAACGCGTCCTCTCACACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR TCA 90 bp CCCTTCCCTGCTAAGGCAGCAGCACAGTCCATAGTTTTCTCAATGCCTCGTGGGTACCAGCTTTCACCTTaGGGGCTTCCCGTGGACTCA +
Preference number: 4 (lower is better)
Translates to: PFPAKAAAQSIVFSMPRGYQLSP*GLPVDS
Trigger: TGAGTCCACGGGAAGCCCTCAAGGTGAAAGCTGGTA...CCCACGAGGCATTGAGAAAACTATGGACTGTGCTGCTGCCTTAGCAGGGAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR TCA 90 bp ATAGCCTCTGTACAAATGAGGAAACAGACTCAAGAGGGACTTGCTCAGGGTCCCGTGCAGGGGCAGGACTaGAGCCACCACAGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: IASVQMRKQTQEGLAQGPVQGQD*SHHSSG
Trigger: TCCTGAGCTGTGGTGGCTTCAGTCCTGCCCCTGCAC...GGGACCCTGAGCAAGTCCCTCTTGAGTCTGTTTCCTCATTTGTACAGAGGCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR GCA 90 bp GAGGACGCGTTGGGGGTGACTTTGGAAATGTGGGCTTGGATTCTACAGAACCTCGCTGCAGCTTGGGGCTaGCTTCCTCACTTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: EDALGVTLEMWAWILQNLAAAWG*LPHFLL
Trigger: CAAGAGGAAGTGAGGAAGGCAGCCCCAAGCTGCAGC...GAGGTTCTGTAGAATCCAAGCCCACATTTCCAAAGTCACCCCCAACGCGTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR GCA 90 bp CATCAGCATGAGGACCGCCAGCACCAAGATGGCCACCAACACTCCAGCTACCACATGATAAGTTCATGCTaGAGCTTGGGGCTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: HQHEDRQHQDGHQHSSYHMISSC*SLGLPS
Trigger: GGAAGGCAGCCCCAAGCTGCAGCATGAACTTATCAT...GTGGTAGCTGGAGTGTTGGTGGCCATCTTGGTGCTGGCGGTCCTCATGCTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR GCA 90 bp TGTCAGCCACACAGAAGAAGTACGAGGAGGGGCCAAGTGTACACAGCCTCCCGCGGTATGATAAGTTCATaGTGCAGCTTGGGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: CQPHRRSTRRGQVYTASRGMISS*CSLGLP
Trigger: AGGCAGCCCCAAGCTGCAGCATGAACTTATCATACC...GCGGGAGGCTGTGTACACTTGGCCCCTCCTCGTACTTCTTCTGTGTGGCTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR GCA 90 bp CCCCGGCACTGGATCTGCCTCCCATTCATGATGATAGTGGTGTCAATGGGCACCCTGTCTCCCTCACCGTaGCGTGGTAAAAGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: PRHWICLPFMMIVVSMGTLSPSP*RGKSSD
Trigger: ATCACTGCTTTTACCACGGCACGGTGAGGGAGACAG...GGTGCCCATTGACACCACTATCATCATGAATGGGAGGCAGATCCAGTGCCGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR GCA 90 bp TTCCCATGGCTTTCTTGGGTGTCCAGCAGAGCTGTTATACACGTGGTTAACACATCACACTGCCTGGCCTaGTCGCGGCACAGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: FPWLSWVSSRAVIHVVNTSHCLA*SRHRVP
Trigger: TGGGACCCTGTGCCGCGAGCAGGCCAGGCAGTGTGA...TGTGTTAACCACGTGTATAACAGCTCTGCTGGACACCCAAGAAAGCCATGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR GCA 90 bp CCTTGCTCTTCACAACAACCTGATGGGGCTGGTACTACTGCTCATCATAGCCTCGGCAGTGGGGAGACTTaGCCGTACAGAACTCCGGGA +
Preference number: 4 (lower is better)
Translates to: PCSSQQPDGAGTTAHHSLGSGET*PYRTPG
Trigger: TCCCGGAGTTCTGTACGGGCAAGTCTCCCCACTGCC...GAGGCTATGATGAGCAGTAGTACCAGCCCCATCAGGTTGTTGTGAAGAGCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR GCA 90 bp CCTTCAGTTTCAAAGAAGGAGGTGTTCCTGCACTGCCCCTCAAAGCAAATATGGCTCGGTAGACGTGGGTaGCCCGGCACTGGATCTGCC +
Preference number: 4 (lower is better)
Translates to: PSVSKKEVFLHCPSKQIWLGRRG*PGTGSA
Trigger: GGCAGATCCAGTGCCGGGGCACCCACGTCTACCGAG...CCATATTTGCTTTGAGGGGCAGTGCAGGAACACCTCCTTCTTTGAAACTGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR GCA 90 bp AAACGCACAGTGGACGGTGTGAGAGGACGCGTTGGGGGTGACTTTGGAAATGTGTTGCCCTGGGGCGTCTaGAGCTTGAAAGTTGGGTTG +
Preference number: 4 (lower is better)
Translates to: KRTVDGVRGRVGGDFGNVLPWGV*SLKVGL
Trigger: CAACCCAACTTTCAAGCTGCAGACGCCCCAGGGCAA...CACATTTCCAAAGTCACCCCCAACGCGTCCTCTCACACCGTCCACTGTGCGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR GCA 90 bp AAGTCAATGACCAGCCTGCTCCCTCGTGTGTACTTTGTAAATAGCTGGGCTCCCGAAGCCCAAGCCCGGTaGTCCTCCTGCTGTCTACAC +
Preference number: 4 (lower is better)
Translates to: KSMTSLLPRVYFVNSWAPEAQAR*SSCCLH
Trigger: GTGTAGACAGCAGGAGGAGCACCGGGCTTGGGCTTC...GGGAGCCCAGCTATTTACAAAGTACACACGAGGGAGCAGGCTGGTCATTGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp AAACGCACAGTGGACGGTGTGAGAGGACGCGTTGGGGGTGACTTTGGAAATGTGGTTCATGCTGCAGCTTaGGGCTGCCTTCCTCACTTC +
Preference number: 4 (lower is better)
Translates to: KRTVDGVRGRVGGDFGNVVHAAA*GCLPHF
Trigger: GAAGTGAGGAAGGCAGCCCCAAGCTGCAGCATGAAC...CACATTTCCAAAGTCACCCCCAACGCGTCCTCTCACACCGTCCACTGTGCGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp AAGTCAATGACCAGCCTGCTCCCTCGTGTGTACTTTGTAAATAGCTGGGCTCCCCCCTGGTGGTGGGCTTaGAGTGCTCGAACCCACAGT +
Preference number: 4 (lower is better)
Translates to: KSMTSLLPRVYFVNSWAPPWWWA*SARTHS
Trigger: ACTGTGGGTTCGAGCACTCCAAGCCCACCACCAGGG...GGGAGCCCAGCTATTTACAAAGTACACACGAGGGAGCAGGCTGGTCATTGACTT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp GGCCAGGTGGCTTCTACTAATGCACTTCCTTGCTCTTCACAACAACCTGATGGGGAAGAGCCCAGTCCCTaGTGGTGGGCTTGGAGTGCT +
Preference number: 4 (lower is better)
Translates to: GQVASTNALPCSSQQPDGEEPSP*WWAWSA
Trigger: AGCACTCCAAGCCCACCACCAGGGACTGGGCTCTTC...CCCATCAGGTTGTTGTGAAGAGCAAGGAAGTGCATTAGTAGAAGCCACCTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp CCGGCACTGGATCTGCCTCCCATTCATGATGATAGTGGTGTCAATGGGCACCGCTTGACTCCTCCAGACTaGTACACAGAGCACATGGCC +
Preference number: 4 (lower is better)
Translates to: PALDLPPIHDDSGVNGHRLTPPD*YTEHMA
Trigger: GGCCATGTGCTCTGTGTACCAGTCTGGAGGAGTCAA...GCGGTGCCCATTGACACCACTATCATCATGAATGGGAGGCAGATCCAGTGCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CCA 90 bp AGCCACACAGAAGAAGTACGAGGAGGGGCCAAGTGTACACAGCCTCCCGCAGGCCTCCATACAACATCCTaGTGTCTGGCATGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: SHTEEVRGGAKCTQPPAGLHTTS*CLACWR
Trigger: TCTCCAACATGCCAGACACCAGGATGTTGTATGGAG...GCCTGCGGGAGGCTGTGTACACTTGGCCCCTCCTCGTACTTCTTCTGTGTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp TCTACTAATGCACTTCCTTGCTCTTCACAACAACCTGATGGGGCTGGTACTACTCAATGGGCACCGCGTTaGACTCCAGGGGCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: STNALPCSSQQPDGAGTTQWAPR*TPGAGP
Trigger: AGGCCCGGCCCCTGGAGTCCAACGCGGTGCCCATTG...AGTAGTACCAGCCCCATCAGGTTGTTGTGAAGAGCAAGGAAGTGCATTAGTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp TTCCCACAGCCTTCAGTTTCAAAGAAGGAGGTGTTCCTGCACTGCCCCTCAAAGTGGGTGCCCCGGCACTaGATCTGCCTCCCATTCATG +
Preference number: 4 (lower is better)
Translates to: FPQPSVSKKEVFLHCPSKWVPRH*ICLPFM
Trigger: CATGAATGGGAGGCAGATCCAGTGCCGGGGCACCCA...CTTTGAGGGGCAGTGCAGGAACACCTCCTTCTTTGAAACTGAAGGCTGTGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CCA 90 bp GGGGTGACTTTGGAAATGTGGGCTTGGATTCTACAGAACCTCTCCTTCGCAGGCAGTCATCACCAGCCCTaGGTCCAGCATGTCACCCTC +
Preference number: 4 (lower is better)
Translates to: GVTLEMWAWILQNLSFAGSHHQP*VQHVTL
Trigger: GAGGGTGACATGCTGGACCCAGGGCTGGTGATGACT...GCCTGCGAAGGAGAGGTTCTGTAGAATCCAAGCCCACATTTCCAAAGTCACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CCA 90 bp CGTGGGAATACAGCATGGTCAGCCAGCTTCTTCACCTCATCCCTTTCTGACCTGAGTCATCACCAGCCCTaGGTCCAGCATGTCACCCTC +
Preference number: 4 (lower is better)
Translates to: RGNTAWSASFFTSSLSDLSHHQP*VQHVTL
Trigger: GAGGGTGACATGCTGGACCCAGGGCTGGTGATGACT...CAGGTCAGAAAGGGATGAGGTGAAGAAGCTGGCTGACCATGCTGTATTCCCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp CACAGAAGAAGTACGAGGAGGGGCCAAGTGTACACAGCCTCCCGCAGGCCAGGTTTGTTACAGACCCCATaGCCATTGCACTTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: HRRSTRRGQVYTASRRPGLLQTP*PLHFFP
Trigger: TGGGAAGAAGTGCAATGGCCATGGGGTCTGTAACAA...ACCTGGCCTGCGGGAGGCTGTGTACACTTGGCCCCTCCTCGTACTTCTTCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp TTCCAGTTGGCGTTCCCATGGCTTTCTTGGGTGTCCAGCAGAGCTGTTATACACTCGATACTGCCCCCGTaGCCCGGTGTGTTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: FQLAFPWLSWVSSRAVIHSILPP*PGVLQK
Trigger: CTTCTGCAACACACCGGGCCACGGGGGCAGTATCGA...GTGTATAACAGCTCTGCTGGACACCCAAGAAAGCCATGGGAACGCCAACTGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CCA 90 bp GGGGGTGACTTTGGAAATGTGGGCTTGGATTCTACAGAACCTCTCCTTCGCAGGCCGCCAGCACCAAGATaGCCACCAACACTCCAGCTA +
Preference number: 4 (lower is better)
Translates to: GGDFGNVGLDSTEPLLRRPPAPR*PPTLQL
Trigger: TAGCTGGAGTGTTGGTGGCCATCTTGGTGCTGGCGG...CCTGCGAAGGAGAGGTTCTGTAGAATCCAAGCCCACATTTCCAAAGTCACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CCA 90 bp GACACATACAAACGCACAGTGGACGGTGTGAGAGGACGCGTTGGGGGTGACTTTACTGTTGCCTCAGCTTaGAAGGGAGAGCTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: DTYKRTVDGVRGRVGGDFTVASA*KGELRA
Trigger: AGCCCTCAGCTCTCCCTTCCAAGCTGAGGCAACAGT...AAAGTCACCCCCAACGCGTCCTCTCACACCGTCCACTGTGCGTTTGTATGTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CCA 90 bp AAACGCACAGTGGACGGTGTGAGAGGACGCGTTGGGGGTGACTTTGGAAATGTGACCTTTCGCTTGCCCTaGGGCGTCTGCAGCTTGAAA +
Preference number: 4 (lower is better)
Translates to: KRTVDGVRGRVGGDFGNVTFRLP*GVCSLK
Trigger: TTTCAAGCTGCAGACGCCCCAGGGCAAGCGAAAGGT...CACATTTCCAAAGTCACCCCCAACGCGTCCTCTCACACCGTCCACTGTGCGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CCA 90 bp CCCACACTTCGCATCTCTCATGTTGCACTTCCTGTGTTCACCATTCATGTCCTTCAGGTGAGCTGGCAGTaGTGCAGGTGGGGACCCACC +
Preference number: 4 (lower is better)
Translates to: PTLRISHVALPVFTIHVLQVSWQ*CRWGPT
Trigger: GGTGGGTCCCCACCTGCACCACTGCCAGCTCACCTG...AAGGACATGAATGGTGAACACAGGAAGTGCAACATGAGAGATGCGAAGTGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CCA 90 bp GGTGTGAGAGGACGCGTTGGGGGTGACTTTGGAAATGTGGGCTTGGATTCTACACCCACGGCAAGGACATaGGGAACCTGTATCACAGCC +
Preference number: 4 (lower is better)
Translates to: GVRGRVGGDFGNVGLDSTPTART*GTCITA
Trigger: GGCTGTGATACAGGTTCCCCATGTCCTTGCCGTGGG...TGTAGAATCCAAGCCCACATTTCCAAAGTCACCCCCAACGCGTCCTCTCACACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp ACCCCAGGAGTGAATGGATGGCTTCTGCAAGCGAAGTGCTGGCCTGAGGGGCTTCAGTCACTATGGCTGTaGCGCTGTCATTTCAGAGCT +
Preference number: 4 (lower is better)
Translates to: TPGVNGWLLQAKCWPEGLQSLWL*RCHFRA
Trigger: AGCTCTGAAATGACAGCGCCACAGCCATAGTGACTG...AAGCCCCTCAGGCCAGCACTTCGCTTGCAGAAGCCATCCATTCACTCCTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp GGGGACCTTTCCAGTTGGCGTTCCCATGGCTTTCTTGGGTGTCCAGCAGAGCTGTTCCCATGGCTTTCTTaGGTGTCCAGCAGAGCTGTT +
Preference number: 4 (lower is better)
Translates to: GDLSSWRSHGFLGCPAELFPWLS*VSSRAV
Trigger: AACAGCTCTGCTGGACACCCAAGAAAGCCATGGGAA...CAGCTCTGCTGGACACCCAAGAAAGCCATGGGAACGCCAACTGGAAAGGTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CCA 90 bp GAAAATTCACATTGCCCTGGATCCCAGACACATACAAACGCACAGTGGACGGTGCTTCGCAGGCTCCCCTaGGGAAGGGGACCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: ENSHCPGSQTHTNAQWTVLRRLP*GRGPFQ
Trigger: CTGGAAAGGTCCCCTTCCCCAGGGGAGCCTGCGAAG...CACCGTCCACTGTGCGTTTGTATGTGTCTGGGATCCAGGGCAATGTGAATTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR TCA 90 bp TCTCCAGGTGCTTTGCAAAAACCGTCCTATCTAGCAAAGCACCACACGGCCCTCCGGAGTGGTCCATGTTaGCTCCTCCAGACTGGTACA +
Preference number: 4 (lower is better)
Translates to: SPGALQKPSYLAKHHTALRSGPC*LLQTGT
Trigger: TGTACCAGTCTGGAGGAGTCAACATGGACCACTCCG...GAGGGCCGTGTGGTGCTTTGCTAGATAGGACGGTTTTTGCAAAGCACCTGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR TCA 90 bp CAATGCCTCGTGGGAATACAGCATGGTCAGCCAGCTTCTTCACCTCATCCCTTTACTGCTCCTGGTAGGTaGGGCACATGCCGTTGTAGC +
Preference number: 4 (lower is better)
Translates to: QCLVGIQHGQPASSPHPFTAPGR*GTCRCS
Trigger: GCTACAACGGCATGTGCCTCACCTACCAGGAGCAGT...AAAGGGATGAGGTGAAGAAGCTGGCTGACCATGCTGTATTCCCACGAGGCATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR TCA 90 bp GGGGTGACTTTGGAAATGTGGGCTTGGATTCTACAGAACCTCTCCTTCGCAGGCCCAGTCCCGCTGTTCTaGGAAACCCTGAAGGGACAA +
Preference number: 4 (lower is better)
Translates to: GVTLEMWAWILQNLSFAGPVPLF*ETLKGQ
Trigger: TTGTCCCTTCAGGGTTTCTCAGAACAGCGGGACTGG...GCCTGCGAAGGAGAGGTTCTGTAGAATCCAAGCCCACATTTCCAAAGTCACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR TCA 90 bp AAACGCACAGTGGACGGTGTGAGAGGACGCGTTGGGGGTGACTTTGGAAATGTGGGATTTCCGGAGTGTTaGTCACCTTTCGCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: KRTVDGVRGRVGGDFGNVGFPEC*SPFACP
Trigger: AGGGCAAGCGAAAGGTGATCAACACTCCGGAAATCC...CACATTTCCAAAGTCACCCCCAACGCGTCCTCTCACACCGTCCACTGTGCGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR TCA 90 bp CAAGACTGGCAAACTGAGACTGTCAGCCACACAGAAGAAGTACGAGGAGGGGCCGGATTTCCGGAGTGTTaGTCACCTTTCGCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: QDWQTETVSHTEEVRGGAGFPEC*SPFACP
Trigger: AGGGCAAGCGAAAGGTGATCAACACTCCGGAAATCC...GGCCCCTCCTCGTACTTCTTCTGTGTGGCTGACAGTCTCAGTTTGCCAGTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR TCA 90 bp ACTTATTTCCAAACCCAAGAACATCCAAGAAGCACCTATTGTGTGCAGAGAACTAGAGGCCGGGACTGCTaGGGGCCAGCACCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: TYFQTQEHPRSTYCVQRTRGRDC*GPAPGG
Trigger: GCCCCCTGGTGCTGGCCCTCAGCAGTCCCGGCCTCT...AGTTCTCTGCACACAATAGGTGCTTCTTGGATGTTCTTGGGTTTGGAAATAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR TCA 90 bp GGGACCTTTCCAGTTGGCGTTCCCATGGCTTTCTTGGGTGTCCAGCAGAGCTGTAAGCCGAGGAGGCACTaGGTCAACAGGGAGATTTTT +
Preference number: 4 (lower is better)
Translates to: GTFPVGVPMAFLGVQQSCKPRRH*VNREIF
Trigger: AAAAATCTCCCTGTTGACTCAGTGCCTCCTCGGCTT...ACAGCTCTGCTGGACACCCAAGAAAGCCATGGGAACGCCAACTGGAAAGGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR TCA 90 bp TTTCAAGAGCAAACAATTGCTCATGGCAGGATGGGAGGAGGCCCCAGGAAAGCCGAAGGTCAGGACTGCTaGGGGTTTGCTCACCAAAGC +
Preference number: 4 (lower is better)
Translates to: FQEQTIAHGRMGGGPRKAEGQDC*GFAHQS
Trigger: GCTTTGGTGAGCAAACCCTCAGCAGTCCTGACCTTC...GGCTTTCCTGGGGCCTCCTCCCATCCTGCCATGAGCAATTGTTTGCTCTTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR TCA 90 bp CTTTGGAAATGTGGGCTTGGATTCTACAGAACCTCTCCTTCGCAGGCTCCCCTGGACAAAAAGCTGGGTTaGGGAAGAGGCTCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: LWKCGLGFYRTSPSQAPLDKKLG*GRGSLL
Trigger: GAGCAGGGAGCCTCTTCCTCAACCCAGCTTTTTGTC...CAGGGGAGCCTGCGAAGGAGAGGTTCTGTAGAATCCAAGCCCACATTTCCAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR GCA 90 bp TGCAGGGGCAGGACTGAAGCCACCACAGCTCAGGATTCTAAGAATCACCTTTCAGCTGCAGCTTGGGGCTaGCTTCCTCACTTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: CRGRTEATTAQDSKNHLSAAAWG*LPHFLL
Trigger: CAAGAGGAAGTGAGGAAGGCAGCCCCAAGCTGCAGC...TGAAAGGTGATTCTTAGAATCCTGAGCTGTGGTGGCTTCAGTCCTGCCCCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR GCA 90 bp GAGGGGCCAAGTGTACACAGCCTCCCGCAGGCCAGGTGGCTTCTACTAATGCACGAAGGAGCAAAAAGTTaGTCATTCTTCTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: EGPSVHSLPQARWLLLMHEGAKS*SFFSRS
Trigger: GGACCTGGAGAAGAATGAGCAACTTTTTGCTCCTTC...GTGCATTAGTAGAAGCCACCTGGCCTGCGGGAGGCTGTGTACACTTGGCCCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR GCA 90 bp GACACATACAAACGCACAGTGGACGGTGTGAGAGGACGCGTTGGGGGTGACTTTCCCCGGCACTGGATCTaGCTCCCATTCATGATGATA +
Preference number: 4 (lower is better)
Translates to: DTYKRTVDGVRGRVGGDFPRHWI*LPFMMI
Trigger: TATCATCATGAATGGGAGGCAGATCCAGTGCCGGGG...AAAGTCACCCCCAACGCGTCCTCTCACACCGTCCACTGTGCGTTTGTATGTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR GCA 90 bp TGGTACTTCTGGGCAAGCAGCTTGCGCCTCCAACTGAGAAAGGACCAGAGGGTAAGACCCCATGGCCATTaGACTTCTTCCCACAGCCTT +
Preference number: 4 (lower is better)
Translates to: WYFWASSLRLQLRKDQRVRPHGH*TSSHSL
Trigger: AAGGCTGTGGGAAGAAGTGCAATGGCCATGGGGTCT...TACCCTCTGGTCCTTTCTCAGTTGGAGGCGCAAGCTGCTTGCCCAGAAGTACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR GCA 90 bp GACTGCAGGTTCAGATGGCTCATGCAGTCACTATGGCTGTGGCGCTGTCATTTCTGGCCATGGGTCCTCTaGAGTGTCCAGAGAGCTCAA +
Preference number: 4 (lower is better)
Translates to: DCRFRWLMQSLWLWRCHFWPWVL*SVQRAQ
Trigger: TTGAGCTCTCTGGACACTGCAGAGGACCCATGGCCA...GAAATGACAGCGCCACAGCCATAGTGACTGCATGAGCCATCTGAACCTGCAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR GCA 90 bp GGGGACCTTTCCAGTTGGCGTTCCCATGGCTTTCTTGGGTGTCCAGCAGAGCTGTCCTGCTGTCTACACTaGCTACGAATAGTACCTGTC +
Preference number: 4 (lower is better)
Translates to: GDLSSWRSHGFLGCPAELSCCLH*LRIVPV
Trigger: GACAGGTACTATTCGTAGGCAGTGTAGACAGCAGGA...CAGCTCTGCTGGACACCCAAGAAAGCCATGGGAACGCCAACTGGAAAGGTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR GCA 90 bp AAACGCACAGTGGACGGTGTGAGAGGACGCGTTGGGGGTGACTTTGGAAATGTGGGACTGCTGAGGGTTTaGTCACCAAAGCACCACACA +
Preference number: 4 (lower is better)
Translates to: KRTVDGVRGRVGGDFGNVGLLRV*SPKHHT
Trigger: TGTGTGGTGCTTTGGTGAGCAAACCCTCAGCAGTCC...CACATTTCCAAAGTCACCCCCAACGCGTCCTCTCACACCGTCCACTGTGCGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR GCA 90 bp TTCCCATGGCTTTCTTGGGTGTCCAGCAGAGCTGTTATACACGTGGTTAACACAACGGCCCTCCTTCCCTaGTGCAGGGAAGACAGGAGC +
Preference number: 4 (lower is better)
Translates to: FPWLSWVSSRAVIHVVNTTALLP*CREDRS
Trigger: GCTCCTGTCTTCCCTGCAGCAGGGAAGGAGGGCCGT...TGTGTTAACCACGTGTATAACAGCTCTGCTGGACACCCAAGAAAGCCATGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR GCA 90 bp CGCACAGTGGACGGTGTGAGAGGACGCGTTGGGGGTGACTTTGGAAATGTGGGCAGAAAAGTCCTTTTCTaGCTGGGCTTTGAGACGCTT +
Preference number: 4 (lower is better)
Translates to: RTVDGVRGRVGGDFGNVGRKVLF*LGFETL
Trigger: AAGCGTCTCAAAGCCCAGGCAGAAAAGGACTTTTCT...GCCCACATTTCCAAAGTCACCCCCAACGCGTCCTCTCACACCGTCCACTGTGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp TGTACAAATGAGGAAACAGACTCAAGAGGGACTTGCTCAGGGTCCCTCCCCAGGGTTCATGCTGCAGCTTaGGGCTGCCTTCCTCACTTC +
Preference number: 4 (lower is better)
Translates to: CTNEETDSRGTCSGSLPRVHAAA*GCLPHF
Trigger: GAAGTGAGGAAGGCAGCCCCAAGCTGCAGCATGAAC...CCTGGGGAGGGACCCTGAGCAAGTCCCTCTTGAGTCTGTTTCCTCATTTGTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp TATCTAGCAAAGCACCACACGGCCCTCCTTCCCTGCTGCAGGGAAGACAGGAGCCCAATTTCCGTGTGGTaGTTTGAGGGTTACCACTTG +
Preference number: 4 (lower is better)
Translates to: YLAKHHTALLPCCREDRSPISVW*FEGYHL
Trigger: CAAGTGGTAACCCTCAAACCACCACACGGAAATTGG...GCTCCTGTCTTCCCTGCAGCAGGGAAGGAGGGCCGTGTGGTGCTTTGCTAGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp CTGTCAGCCACACAGAAGAAGTACGAGGAGGGGCCAAGTGTACACAGCCTCCCGCCAATTTCCGTGTGGTaGTTTGAGGGTTACCACTTG +
Preference number: 4 (lower is better)
Translates to: LSATQKKYEEGPSVHSLPPISVW*FEGYHL
Trigger: CAAGTGGTAACCCTCAAACCACCACACGGAAATTGG...CGGGAGGCTGTGTACACTTGGCCCCTCCTCGTACTTCTTCTGTGTGGCTGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp ACGGTCCAGCCCGAAGTCAATGACCAGCCTGCTCCCTCGTGTGTACTTTGTAAATCACACATGTTCCCGTaGGTCCACACTTCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: TVQPEVNDQPAPSCVLCKSHMFP*VHTSKP
Trigger: GGGCTTGGAAGTGTGGACCCACGGGAACATGTGTGA...TTTACAAAGTACACACGAGGGAGCAGGCTGGTCATTGACTTCGGGCTGGACCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp CAATGCCTCGTGGGAATACAGCATGGTCAGCCAGCTTCTTCACCTCATCCCTTTCCGATGGTGGTGCCGTaGAAGGACATGCCCGTGATT +
Preference number: 4 (lower is better)
Translates to: QCLVGIQHGQPASSPHPFPMVVP*KDMPVI
Trigger: AATCACGGGCATGTCCTTCCACGGCACCACCATCGG...AAAGGGATGAGGTGAAGAAGCTGGCTGACCATGCTGTATTCCCACGAGGCATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp TCATCCCTTTCTGACCTGACTGCCAAGACTGGCAAACTGAGACTGTCAGCCACATGGCAGCCACGCCAATaGCATTCTCGGAGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: SSLSDLTAKTGKLRLSATWQPRQ*HSRSGP
Trigger: TGGACCACTCCGAGAATGCCATTGGCGTGGCTGCCA...TGTGGCTGACAGTCTCAGTTTGCCAGTCTTGGCAGTCAGGTCAGAAAGGGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp CCTGCTAAGGCAGCAGCACAGTCCATAGTTTTCTCAATGCCTCGTGGGAATACATCTCGTGGGCCATGGTaGCAGCCACGCCAATGGCAT +
Preference number: 4 (lower is better)
Translates to: PAKAAAQSIVFSMPRGNTSRGPW*QPRQWH
Trigger: ATGCCATTGGCGTGGCTGCCACCATGGCCCACGAGA...TGTATTCCCACGAGGCATTGAGAAAACTATGGACTGTGCTGCTGCCTTAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp GAGGGTGGACTGCAGGTTCAGATGGCTCATGCAGTCACTATGGCTGTGGCGCTGCTCCATACAACATCCTaGTGTCTGGCATGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: EGGLQVQMAHAVTMAVALLHTTS*CLACWR
Trigger: TCTCCAACATGCCAGACACCAGGATGTTGTATGGAG...CAGCGCCACAGCCATAGTGACTGCATGAGCCATCTGAACCTGCAGTCCACCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp CTGGTACTACTGCTCATCATAGCCTCTGTACAAATGAGGAAACAGACTCAAGAGGGAGGTCACACTGCCTaGCCTGCTCGCGGCACAGGG +
Preference number: 4 (lower is better)
Translates to: LVLLLIIASVQMRKQTQEGGHTA*PARGTG
Trigger: CCCTGTGCCGCGAGCAGGCCAGGCAGTGTGACCTCC...CTCTTGAGTCTGTTTCCTCATTTGTACAGAGGCTATGATGAGCAGTAGTACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp GAGGACGCGTTGGGGGTGACTTTGGAAATGTGGGCTTGGATTCTACAGAACCTCAAGTTGGTAGGGCAGTaGGGAGACTTGCCCGTACAG +
Preference number: 4 (lower is better)
Translates to: EDALGVTLEMWAWILQNLKLVGQ*GDLPVQ
Trigger: CTGTACGGGCAAGTCTCCCCACTGCCCTACCAACTT...GAGGTTCTGTAGAATCCAAGCCCACATTTCCAAAGTCACCCCCAACGCGTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CCA 90 bp TTGGGCGTTGTCATGGTACTTCTGGGCAAGCAGCTTGCGCCTCCAACTGAGAAACAGCCCGGCAGGCAGTaGCAGTTCTGGTTGTTGTTA +
Preference number: 4 (lower is better)
Translates to: LGVVMVLLGKQLAPPTEKQPGRQ*QFWLLL
Trigger: TAACAACAACCAGAACTGCCACTGCCTGCCGGGCTG...TTTCTCAGTTGGAGGCGCAAGCTGCTTGCCCAGAAGTACCATGACAACGCCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CCA 90 bp CCTTCAGTTTCAAAGAAGGAGGTGTTCCTGCACTGCCCCTCAAAGCAAATATGGACCACGCAGATAATCTaGAGGGGGCCGGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: PSVSKKEVFLHCPSKQIWTTQII*RGPGRR
Trigger: CCTCCTCCCCGGCCCCCTCCAGATTATCTGCGTGGT...CCATATTTGCTTTGAGGGGCAGTGCAGGAACACCTCCTTCTTTGAAACTGAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CCA 90 bp GACACATACAAACGCACAGTGGACGGTGTGAGAGGACGCGTTGGGGGTGACTTTCACCCCAGGAGTGAATaGATGGCTTCTGCAAGCGAA +
Preference number: 4 (lower is better)
Translates to: DTYKRTVDGVRGRVGGDFHPRSE*MASASE
Trigger: TTCGCTTGCAGAAGCCATCCATTCACTCCTGGGGTG...AAAGTCACCCCCAACGCGTCCTCTCACACCGTCCACTGTGCGTTTGTATGTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp TCTCCAGGTGCTTTGCAAAAACCGTCCTATCTAGCAAAGCACCACACGGCCCTCGAAGAGAGAAAAGCGTaGGGCACCAGGAAAGTGCGG +
Preference number: 4 (lower is better)
Translates to: SPGALQKPSYLAKHHTALEERKA*GTRKVR
Trigger: CCGCACTTTCCTGGTGCCCCACGCTTTTCTCTCTTC...GAGGGCCGTGTGGTGCTTTGCTAGATAGGACGGTTTTTGCAAAGCACCTGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp GGTGTGAGAGGACGCGTTGGGGGTGACTTTGGAAATGTGGGCTTGGATTCTACACACCCAGCACCTTTGTaGAGTGGGAGTCTATCTCCC +
Preference number: 4 (lower is better)
Translates to: GVRGRVGGDFGNVGLDSTHPAPL*SGSLSP
Trigger: GGGAGATAGACTCCCACTCCACAAAGGTGCTGGGTG...TGTAGAATCCAAGCCCACATTTCCAAAGTCACCCCCAACGCGTCCTCTCACACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp TTTCAAGAGCAAACAATTGCTCATGGCAGGATGGGAGGAGGCCCCAGGAAAGCCGCAAACAATTGCTCATaGCAGGATGGGAGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: FQEQTIAHGRMGGGPRKAANNCS*QDGRRP
Trigger: GGGCCTCCTCCCATCCTGCCATGAGCAATTGTTTGC...GGCTTTCCTGGGGCCTCCTCCCATCCTGCCATGAGCAATTGTTTGCTCTTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp ACCCCAGGAGTGAATGGATGGCTTCTGCAAGCGAAGTGCTGGCCTGAGGGGCTTTGTGAGGCATGGGGTTaGGTTTTGAGGATGTTGCTT +
Preference number: 4 (lower is better)
Translates to: TPGVNGWLLQAKCWPEGLCEAWG*VLRMLL
Trigger: AAGCAACATCCTCAAAACCCAACCCCATGCCTCACA...AAGCCCCTCAGGCCAGCACTTCGCTTGCAGAAGCCATCCATTCACTCCTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp ACCCCAGGAGTGAATGGATGGCTTCTGCAAGCGAAGTGCTGGCCTGAGGGGCTTCAGCATACTGGGCACTaGAAAGAAAAGGGGATGCAT +
Preference number: 4 (lower is better)
Translates to: TPGVNGWLLQAKCWPEGLQHTGH*KEKGMH
Trigger: ATGCATCCCCTTTTCTTTCCAGTGCCCAGTATGCTG...AAGCCCCTCAGGCCAGCACTTCGCTTGCAGAAGCCATCCATTCACTCCTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp GAAAATTCACATTGCCCTGGATCCCAGACACATACAAACGCACAGTGGACGGTGCTCCCCACCAGACCCTaGACTTTGGGCCATCCTCAG +
Preference number: 4 (lower is better)
Translates to: ENSHCPGSQTHTNAQWTVLPTRP*TLGHPQ
Trigger: CTGAGGATGGCCCAAAGTCCAGGGTCTGGTGGGGAG...CACCGTCCACTGTGCGTTTGTATGTGTCTGGGATCCAGGGCAATGTGAATTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp CTGGGCAAGCAGCTTGCGCCTCCAACTGAGAAAGGACCAGAGGGTAGAATATGGGAGCCCTCAGAATCATaGCAGGAGGCAAAAGGCACT +
Preference number: 4 (lower is better)
Translates to: LGKQLAPPTEKGPEGRIWEPSES*QEAKGT
Trigger: AGTGCCTTTTGCCTCCTGCCATGATTCTGAGGGCTC...CCATATTCTACCCTCTGGTCCTTTCTCAGTTGGAGGCGCAAGCTGCTTGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR CAA 72 bp CCTCAGCCTTGCAGTGAGGTTTTCAAGAGCAAACAATaGCTCATGGCAGGATGGGAGGAGGCCCCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: PQPCSEVFKSKQ*LMAGWEEAPGK
Trigger: CTTTCCTGGGGCCTCCTCCCATCCTGCCATGAGCAATTGTTTGCTCTTGAAAACCTCACTGCAAGGCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR CAA 72 bp CAGGGAGAGACTTCCAATAAAGATTGGAAAGGCGTATaGCAGGAGGTGGGGAGGGGCTATTGCTTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: QGETSNKDWKGV*QEVGRGYCFRG
Trigger: CCCCCTGAAGCAATAGCCCCTCCCCACCTCCTGCAATACGCCTTTCCAATCTTTATTGGAAGTCTCTCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR CAA 72 bp GAAACCCTGAAGGGACAACTGAACTGTTGCCTCAGCTaGGAAGGGAGAGCTGAGGGCTTGAGTTGGCCTAGT +
Preference number: 4 (lower is better)
Translates to: ETLKGQLNCCLS*EGRAEGLSWPS
Trigger: ACTAGGCCAACTCAAGCCCTCAGCTCTCCCTTCCAAGCTGAGGCAACAGTTCAGTTGTCCCTTCAGGGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR TCA 90 bp CCTTCAGTTTCAAAGAAGGAGGTGTTCCTGCACTGCCCCTCAAAGCAAATATGGCGGGCCTCAGAGCTCTaGCACTGGATCTTCCCACAC +
Preference number: 4 (lower is better)
Translates to: PSVSKKEVFLHCPSKQIWRASEL*HWIFPH
Trigger: GTGTGGGAAGATCCAGTGTCAGAGCTCTGAGGCCCG...CCATATTTGCTTTGAGGGGCAGTGCAGGAACACCTCCTTCTTTGAAACTGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR TCA 90 bp ACCATCCATCTGGTAGAAGTTGGTAGGGCAGTGGGGAGACTTGCCCGTACAGAAAGTAGTACATCAGCATaGGGACCGCCAGCACCAAGA +
Preference number: 4 (lower is better)
Translates to: TIHLVEVGRAVGRLARTESSTSA*GPPAPR
Trigger: TCTTGGTGCTGGCGGTCCTCATGCTGATGTACTACT...TTCTGTACGGGCAAGTCTCCCCACTGCCCTACCAACTTCTACCAGATGGATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR TCA 90 bp TTTCCAGTTGGCGTTCCCATGGCTTTCTTGGGTGTCCAGCAGAGCTGTTATACAGGGGCGTCTGCAGCTTaGAAGTTGGGTTGGCATGAC +
Preference number: 4 (lower is better)
Translates to: FPVGVPMAFLGVQQSCYTGASAA*KLGWHD
Trigger: GTCATGCCAACCCAACTTTCAAGCTGCAGACGCCCC...TGTATAACAGCTCTGCTGGACACCCAAGAAAGCCATGGGAACGCCAACTGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR GCA 90 bp GACACATACAAACGCACAGTGGACGGTGTGAGAGGACGCGTTGGGGGTGACTTTCTTCCCTTTTCATCCTaGGAGGTCGCTTCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: DTYKRTVDGVRGRVGGDFLPFSS*EVASWS
Trigger: AGACCAAGAAGCGACCTCGCAGGATGAAAAGGGAAG...AAAGTCACCCCCAACGCGTCCTCTCACACCGTCCACTGTGCGTTTGTATGTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR GCA 90 bp CCCAGAAATGGGTCTGTTCTCTGCTCAGAGGGCAACGGTCCAGCCCGAAGTCAACAGAATCATGGGTCATaGCAAAGTTGTGGCCCATCT +
Preference number: 4 (lower is better)
Translates to: PRNGSVLCSEGNGPARSQQNHGS*QSCGPS
Trigger: AGATGGGCCACAACTTTGGCATGACCCATGATTCTG...TTGACTTCGGGCTGGACCGTTGCCCTCTGAGCAGAGAACAGACCCATTTCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR GCA 90 bp AAAAGAAAATTCACATTGCCCTGGATCCCAGACACATACAAACGCACAGTGGACCTCGGTAGACGTGGGTaGCCCGGCACTGGATCTGCC +
Preference number: 4 (lower is better)
Translates to: KRKFTLPWIPDTYKRTVDLGRRG*PGTGSA
Trigger: GGCAGATCCAGTGCCGGGGCACCCACGTCTACCGAG...GTCCACTGTGCGTTTGTATGTGTCTGGGATCCAGGGCAATGTGAATTTTCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR GCA 90 bp TTTCAAGAGCAAACAATTGCTCATGGCAGGATGGGAGGAGGCCCCAGGAAAGCCAGACCCCATGGCCATTaGACTTCTTCCCACAGCCTT +
Preference number: 4 (lower is better)
Translates to: FQEQTIAHGRMGGGPRKARPHGH*TSSHSL
Trigger: AAGGCTGTGGGAAGAAGTGCAATGGCCATGGGGTCT...GGCTTTCCTGGGGCCTCCTCCCATCCTGCCATGAGCAATTGTTTGCTCTTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR GCA 90 bp GGGGTGACTTTGGAAATGTGGGCTTGGATTCTACAGAACCTCTCCTTCGCAGGCAGACCCCATGGCCATTaGACTTCTTCCCACAGCCTT +
Preference number: 4 (lower is better)
Translates to: GVTLEMWAWILQNLSFAGRPHGH*TSSHSL
Trigger: AAGGCTGTGGGAAGAAGTGCAATGGCCATGGGGTCT...GCCTGCGAAGGAGAGGTTCTGTAGAATCCAAGCCCACATTTCCAAAGTCACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR GCA 90 bp AAACGCACAGTGGACGGTGTGAGAGGACGCGTTGGGGGTGACTTTGGAAATGTGGGACAACTGAACTGTTaGCTCAGCTTGGAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: KRTVDGVRGRVGGDFGNVGQLNC*LSLEGR
Trigger: TCTCCCTTCCAAGCTGAGGCAACAGTTCAGTTGTCC...CACATTTCCAAAGTCACCCCCAACGCGTCCTCTCACACCGTCCACTGTGCGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR GCA 90 bp GACACATACAAACGCACAGTGGACGGTGTGAGAGGACGCGTTGGGGGTGACTTTGGACAACTGAACTGTTaGCTCAGCTTGGAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: DTYKRTVDGVRGRVGGDFGQLNC*LSLEGR
Trigger: TCTCCCTTCCAAGCTGAGGCAACAGTTCAGTTGTCC...AAAGTCACCCCCAACGCGTCCTCTCACACCGTCCACTGTGCGTTTGTATGTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR GCA 90 bp CAAGACTGGCAAACTGAGACTGTCAGCCACACAGAAGAAGTACGAGGAGGGGCCGGACAACTGAACTGTTaGCTCAGCTTGGAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: QDWQTETVSHTEEVRGGAGQLNC*LSLEGR
Trigger: TCTCCCTTCCAAGCTGAGGCAACAGTTCAGTTGTCC...GGCCCCTCCTCGTACTTCTTCTGTGTGGCTGACAGTCTCAGTTTGCCAGTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR GCA 90 bp TTCCCACAGCCTTCAGTTTCAAAGAAGGAGGTGTTCCTGCACTGCCCCTCAAAGTTGCCCTGGGGCGTCTaGAGCTTGAAAGTTGGGTTG +
Preference number: 4 (lower is better)
Translates to: FPQPSVSKKEVFLHCPSKLPWGV*SLKVGL
Trigger: CAACCCAACTTTCAAGCTGCAGACGCCCCAGGGCAA...CTTTGAGGGGCAGTGCAGGAACACCTCCTTCTTTGAAACTGAAGGCTGTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR GCA 90 bp ACTTATTTCCAAACCCAAGAACATCCAAGAAGCACCTATTGTGTGCAGAGAACTGGGCCGCAGTGGGGATaGACCTCCTGGCCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: TYFQTQEHPRSTYCVQRTGPQWG*TSWPGE
Trigger: CTCCCCAGGCCAGGAGGTGCATCCCCACTGCGGCCC...AGTTCTCTGCACACAATAGGTGCTTCTTGGATGTTCTTGGGTTTGGAAATAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR GCA 90 bp TTTCCAGTTGGCGTTCCCATGGCTTTCTTGGGTGTCCAGCAGAGCTGTTATACAAATGGGAAGCTCTCTTaGGTGCCCTGCACCCCAGGA +
Preference number: 4 (lower is better)
Translates to: FPVGVPMAFLGVQQSCYTNGKLS*VPCTPG
Trigger: TCCTGGGGTGCAGGGCACGCAAGAGAGCTTCCCATT...TGTATAACAGCTCTGCTGGACACCCAAGAAAGCCATGGGAACGCCAACTGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp CCTTCAGTTTCAAAGAAGGAGGTGTTCCTGCACTGCCCCTCAAAGCAAATATGGCCCTGGTGGTGGGCTTaGAGTGCTCGAACCCACAGT +
Preference number: 4 (lower is better)
Translates to: PSVSKKEVFLHCPSKQIWPWWWA*SARTHS
Trigger: ACTGTGGGTTCGAGCACTCCAAGCCCACCACCAGGG...CCATATTTGCTTTGAGGGGCAGTGCAGGAACACCTCCTTCTTTGAAACTGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CCA 90 bp TCATCCCTTTCTGACCTGACTGCCAAGACTGGCAAACTGAGACTGTCAGCCACATCACACATGTTCCCGTaGGTCCACACTTCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: SSLSDLTAKTGKLRLSATSHMFP*VHTSKP
Trigger: GGGCTTGGAAGTGTGGACCCACGGGAACATGTGTGA...TGTGGCTGACAGTCTCAGTTTGCCAGTCTTGGCAGTCAGGTCAGAAAGGGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp TTTCAAGAGCAAACAATTGCTCATGGCAGGATGGGAGGAGGCCCCAGGAAAGCCTTGTCATGGTACTTCTaGGCAAGCAGCTTGCGCCTC +
Preference number: 4 (lower is better)
Translates to: FQEQTIAHGRMGGGPRKALSWYF*ASSLRL
Trigger: GAGGCGCAAGCTGCTTGCCCAGAAGTACCATGACAA...GGCTTTCCTGGGGCCTCCTCCCATCCTGCCATGAGCAATTGTTTGCTCTTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp CTTCTACTAATGCACTTCCTTGCTCTTCACAACAACCTGATGGGGCTGGTACTACCATCTCGTGGGCCATaGTGGCAGCCACGCCAATGG +
Preference number: 4 (lower is better)
Translates to: LLLMHFLALHNNLMGLVLPSRGP*WQPRQW
Trigger: CCATTGGCGTGGCTGCCACCATGGCCCACGAGATGG...TAGTACCAGCCCCATCAGGTTGTTGTGAAGAGCAAGGAAGTGCATTAGTAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp TTCACATTGCCCTGGATCCCAGACACATACAAACGCACAGTGGACGGTGTGAGACAGCCCGGCAGGCAGTaGCAGTTCTGGTTGTTGTTA +
Preference number: 4 (lower is better)
Translates to: FTLPWIPDTYKRTVDGVRQPGRQ*QFWLLL
Trigger: TAACAACAACCAGAACTGCCACTGCCTGCCGGGCTG...TCTCACACCGTCCACTGTGCGTTTGTATGTGTCTGGGATCCAGGGCAATGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CCA 90 bp GGCCAGGTGGCTTCTACTAATGCACTTCCTTGCTCTTCACAACAACCTGATGGGCAGCCCGGCAGGCAGTaGCAGTTCTGGTTGTTGTTA +
Preference number: 4 (lower is better)
Translates to: GQVASTNALPCSSQQPDGQPGRQ*QFWLLL
Trigger: TAACAACAACCAGAACTGCCACTGCCTGCCGGGCTG...CCCATCAGGTTGTTGTGAAGAGCAAGGAAGTGCATTAGTAGAAGCCACCTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp TCCCAGAAATGGGTCTGTTCTCTGCTCAGAGGGCAACGGTCCAGCCCGAAGTCAGCTGAGGGCTTGAGTTaGCCTAGTTTGTTGTTCTGT +
Preference number: 4 (lower is better)
Translates to: SQKWVCSLLRGQRSSPKSAEGLS*PSLLFC
Trigger: ACAGAACAACAAACTAGGCCAACTCAAGCCCTCAGC...TGACTTCGGGCTGGACCGTTGCCCTCTGAGCAGAGAACAGACCCATTTCTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp GGGACCTTTCCAGTTGGCGTTCCCATGGCTTTCTTGGGTGTCCAGCAGAGCTGTGCTGAGGGCTTGAGTTaGCCTAGTTTGTTGTTCTGT +
Preference number: 4 (lower is better)
Translates to: GTFPVGVPMAFLGVQQSCAEGLS*PSLLFC
Trigger: ACAGAACAACAAACTAGGCCAACTCAAGCCCTCAGC...ACAGCTCTGCTGGACACCCAAGAAAGCCATGGGAACGCCAACTGGAAAGGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CCA 90 bp CCCCGGCACTGGATCTGCCTCCCATTCATGATGATAGTGGTGTCAATGGGCACCGCTGAGGGCTTGAGTTaGCCTAGTTTGTTGTTCTGT +
Preference number: 4 (lower is better)
Translates to: PRHWICLPFMMIVVSMGTAEGLS*PSLLFC
Trigger: ACAGAACAACAAACTAGGCCAACTCAAGCCCTCAGC...GGTGCCCATTGACACCACTATCATCATGAATGGGAGGCAGATCCAGTGCCGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CCA 90 bp TTCACATTGCCCTGGATCCCAGACACATACAAACGCACAGTGGACGGTGTGAGAACCTTTCGCTTGCCCTaGGGCGTCTGCAGCTTGAAA +
Preference number: 4 (lower is better)
Translates to: FTLPWIPDTYKRTVDGVRTFRLP*GVCSLK
Trigger: TTTCAAGCTGCAGACGCCCCAGGGCAAGCGAAAGGT...TCTCACACCGTCCACTGTGCGTTTGTATGTGTCTGGGATCCAGGGCAATGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CCA 90 bp TCATCCCTTTCTGACCTGACTGCCAAGACTGGCAAACTGAGACTGTCAGCCACAACCTTTCGCTTGCCCTaGGGCGTCTGCAGCTTGAAA +
Preference number: 4 (lower is better)
Translates to: SSLSDLTAKTGKLRLSATTFRLP*GVCSLK
Trigger: TTTCAAGCTGCAGACGCCCCAGGGCAAGCGAAAGGT...TGTGGCTGACAGTCTCAGTTTGCCAGTCTTGGCAGTCAGGTCAGAAAGGGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp AAAAAGAAAATTCACATTGCCCTGGATCCCAGACACATACAAACGCACAGTGGAGAGGCTCCTGCGGCCTaGCACTGGGTTTGCCGGGAG +
Preference number: 4 (lower is better)
Translates to: KKKIHIALDPRHIQTHSGEAPAA*HWVCRE
Trigger: CTCCCGGCAAACCCAGTGCCAGGCCGCAGGAGCCTC...TCCACTGTGCGTTTGTATGTGTCTGGGATCCAGGGCAATGTGAATTTTCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CCA 90 bp ACACCTAGAGGCCATCAGATCATAGTCCCTCTGGGCTTCCAAGGAAGCCGAGGAGTATTCTGGAAACTTTaGGGCAAGTGCTGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: TPRGHQIIVPLGFQGSRGVFWKL*GKCCQR
Trigger: CCTCTGGCAGCACTTGCCCCAAAGTTTCCAGAATAC...TCCTCGGCTTCCTTGGAAGCCCAGAGGGACTATGATCTGATGGCCTCTAGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp ACACCTAGAGGCCATCAGATCATAGTCCCTCTGGGCTTCCAAGGAAGCCGAGGAGACTGCAGGTTCAGATaGCTCATGCAGTCACTATGG +
Preference number: 4 (lower is better)
Translates to: TPRGHQIIVPLGFQGSRGDCRFR*LMQSLW
Trigger: CCATAGTGACTGCATGAGCCATCTGAACCTGCAGTC...TCCTCGGCTTCCTTGGAAGCCCAGAGGGACTATGATCTGATGGCCTCTAGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp ACTGCCAAGACTGGCAAACTGAGACTGTCAGCCACACAGAAGAAGTACGAGGAGCTCCCGCAGGCCAGGTaGCTTCTACTAATGCACTTC +
Preference number: 4 (lower is better)
Translates to: TAKTGKLRLSATQKKYEELPQAR*LLLMHF
Trigger: GAAGTGCATTAGTAGAAGCCACCTGGCCTGCGGGAG...CTCCTCGTACTTCTTCTGTGTGGCTGACAGTCTCAGTTTGCCAGTCTTGGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp AAGACTGGCAAACTGAGACTGTCAGCCACACAGAAGAAGTACGAGGAGGGGCCACGTGGGAATACAGCATaGTCAGCCAGCTTCTTCACC +
Preference number: 4 (lower is better)
Translates to: KTGKLRLSATQKKYEEGPRGNTA*SASFFT
Trigger: GGTGAAGAAGCTGGCTGACCATGCTGTATTCCCACG...TGGCCCCTCCTCGTACTTCTTCTGTGTGGCTGACAGTCTCAGTTTGCCAGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
3UTR CAA 72 bp TCCTTTTCTGCCTGGGCTTTGAGACGCTTGCAGATCTaGCCATCGGTCGGTCTGAGCCTTTTCACTATTCCC +
Preference number: 4 (lower is better)
Translates to: SFSAWALRRLQI*PSVGLSLFTIP
Trigger: GGGAATAGTGAAAAGGCTCAGACCGACCGATGGCAAGATCTGCAAGCGTCTCAAAGCCCAGGCAGAAAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR CAA 72 bp AATTGGGCGTTGTCATGGTACTTCTGGGCAAGCAGCTaGCGCCTCCAACTGAGAAAGGACCAGAGGGTAGAA +
Preference number: 4 (lower is better)
Translates to: NWALSWYFWASS*RLQLRKDQRVE
Trigger: TTCTACCCTCTGGTCCTTTCTCAGTTGGAGGCGCAAGCTGCTTGCCCAGAAGTACCATGACAACGCCCAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
3UTR CAA 72 bp AACTGTTGCCTCAGCTTGGAAGGGAGAGCTGAGGGCTaGAGTTGGCCTAGTTTGTTGTTCTGTCTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: NCCLSLEGRAEG*SWPSLLFCLQQ
Trigger: CTGCTGCAGACAGAACAACAAACTAGGCCAACTCAAGCCCTCAGCTCTCCCTTCCAAGCTGAGGCAACAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR TCA 90 bp GACTGCAGGTTCAGATGGCTCATGCAGTCACTATGGCTGTGGCGCTGTCATTTCTCTCACGGGGCTTTCTaGAGTCTTCCACTGAGGTAT +
Preference number: 4 (lower is better)
Translates to: DCRFRWLMQSLWLWRCHFSHGAF*SLPLRY
Trigger: ATACCTCAGTGGAAGACTTCAGAAAGCCCCGTGAGA...GAAATGACAGCGCCACAGCCATAGTGACTGCATGAGCCATCTGAACCTGCAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR TCA 90 bp TGTGGGCTTGGATTCTACAGAACCTCTCCTTCGCAGGCTCCCCTGGGGAAGGGGTTGAGGGTTACCACTTaGAGTATAATGGGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: CGLGFYRTSPSQAPLGKGLRVTT*SIMGFC
Trigger: ACAGAAACCCATTATACTTCAAGTGGTAACCCTCAA...CCCCTTCCCCAGGGGAGCCTGCGAAGGAGAGGTTCTGTAGAATCCAAGCCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR TCA 90 bp CCCTTCCCTGCTAAGGCAGCAGCACAGTCCATAGTTTTCTCAATGCCTCGTGGGTTCCGTGTGGTGGTTTaGGGGTTACCACTTGAAGTA +
Preference number: 4 (lower is better)
Translates to: PFPAKAAAQSIVFSMPRGFRVVV*GLPLEV
Trigger: TACTTCAAGTGGTAACCCTCAAACCACCACACGGAA...CCCACGAGGCATTGAGAAAACTATGGACTGTGCTGCTGCCTTAGCAGGGAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR TCA 90 bp TGGTACTTCTGGGCAAGCAGCTTGCGCCTCCAACTGAGAAAGGACCAGAGGGTATTCCGTGTGGTGGTTTaGGGGTTACCACTTGAAGTA +
Preference number: 4 (lower is better)
Translates to: WYFWASSLRLQLRKDQRVFRVVV*GLPLEV
Trigger: TACTTCAAGTGGTAACCCTCAAACCACCACACGGAA...TACCCTCTGGTCCTTTCTCAGTTGGAGGCGCAAGCTGCTTGCCCAGAAGTACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR TCA 90 bp TTCCCACAGCCTTCAGTTTCAAAGAAGGAGGTGTTCCTGCACTGCCCCTCAAAGTTCCCGGGGGCGGCTTaGGATGTTCAGATCTGTAAA +
Preference number: 4 (lower is better)
Translates to: FPQPSVSKKEVFLHCPSKFPGAA*DVQICK
Trigger: TTTACAGATCTGAACATCTCAAGCCGCCCCCGGGAA...CTTTGAGGGGCAGTGCAGGAACACCTCCTTCTTTGAAACTGAAGGCTGTGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR TCA 90 bp TGTACAAATGAGGAAACAGACTCAAGAGGGACTTGCTCAGGGTCCCTCCCCAGGAGTTGGCGATCTCTATaGGCTTGTGTTTGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: CTNEETDSRGTCSGSLPRSWRSL*ACVWWR
Trigger: ACGCCACCAAACACAAGCTCATAGAGATCGCCAACT...CCTGGGGAGGGACCCTGAGCAAGTCCCTCTTGAGTCTGTTTCCTCATTTGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR TCA 90 bp CTGGTACTACTGCTCATCATAGCCTCTGTACAAATGAGGAAACAGACTCAAGAGCAGTGGCAGCTGCCATaGTGCACCCACCATCAGCCG +
Preference number: 4 (lower is better)
Translates to: LVLLLIIASVQMRKQTQEQWQLP*CTHHQP
Trigger: CGGCTGATGGTGGGTGCATCATGGCAGCTGCCACTG...CTCTTGAGTCTGTTTCCTCATTTGTACAGAGGCTATGATGAGCAGTAGTACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR TCA 90 bp GTTGGGGGTGACTTTGGAAATGTGGGCTTGGATTCTACAGAACCTCTCCTTCGCAGTAGTACATCAGCATaGGGACCGCCAGCACCAAGA +
Preference number: 4 (lower is better)
Translates to: VGGDFGNVGLDSTEPLLRSSTSA*GPPAPR
Trigger: TCTTGGTGCTGGCGGTCCTCATGCTGATGTACTACT...GCGAAGGAGAGGTTCTGTAGAATCCAAGCCCACATTTCCAAAGTCACCCCCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR TCA 90 bp TGCAGGGGCAGGACTGAAGCCACCACAGCTCAGGATTCTAAGAATCACCTTTCAAGTAGTACATCAGCATaGGGACCGCCAGCACCAAGA +
Preference number: 4 (lower is better)
Translates to: CRGRTEATTAQDSKNHLSSSTSA*GPPAPR
Trigger: TCTTGGTGCTGGCGGTCCTCATGCTGATGTACTACT...TGAAAGGTGATTCTTAGAATCCTGAGCTGTGGTGGCTTCAGTCCTGCCCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR TCA 90 bp GTTGGGGGTGACTTTGGAAATGTGGGCTTGGATTCTACAGAACCTCTCCTTCGCGGAGAGCTGAGGGCTTaGGTTGGCCTAGTTTGTTGT +
Preference number: 4 (lower is better)
Translates to: VGGDFGNVGLDSTEPLLRGELRA*VGLVCC
Trigger: ACAACAAACTAGGCCAACTCAAGCCCTCAGCTCTCC...GCGAAGGAGAGGTTCTGTAGAATCCAAGCCCACATTTCCAAAGTCACCCCCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR TCA 90 bp GTTGGGGGTGACTTTGGAAATGTGGGCTTGGATTCTACAGAACCTCTCCTTCGCGGATTTCCGGAGTGTTaGTCACCTTTCGCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: VGGDFGNVGLDSTEPLLRGFPEC*SPFACP
Trigger: AGGGCAAGCGAAAGGTGATCAACACTCCGGAAATCC...GCGAAGGAGAGGTTCTGTAGAATCCAAGCCCACATTTCCAAAGTCACCCCCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR TCA 90 bp TTCACATTGCCCTGGATCCCAGACACATACAAACGCACAGTGGACGGTGTGAGACGAATAGTACCTGTCTaGGTCAGAGTGACCCGTGTG +
Preference number: 4 (lower is better)
Translates to: FTLPWIPDTYKRTVDGVRRIVPV*VRVTRV
Trigger: CACACGGGTCACTCTGACTCAGACAGGTACTATTCG...TCTCACACCGTCCACTGTGCGTTTGTATGTGTCTGGGATCCAGGGCAATGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR TCA 90 bp TGGGCTTCCAAGGAAGCCGAGGAGGCACTGAGTCAACAGGGAGATTTTTGGAGATGTGAGAGAGGACTCTaGCTTGTAGGTCACAAGCAC +
Preference number: 4 (lower is better)
Translates to: WASKEAEEALSQQGDFWRCERGL*LVGHKH
Trigger: GTGCTTGTGACCTACAAGTCAGAGTCCTCTCTCACA...TCTCCAAAAATCTCCCTGTTGACTCAGTGCCTCCTCGGCTTCCTTGGAAGCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR TCA 90 bp TCATCCCTTTCTGACCTGACTGCCAAGACTGGCAAACTGAGACTGTCAGCCACACCAAGACTGGCAAACTaGGACTGTCAGCCACACAGA +
Preference number: 4 (lower is better)
Translates to: SSLSDLTAKTGKLRLSATPRLAN*DCQPHR
Trigger: TCTGTGTGGCTGACAGTCTCAGTTTGCCAGTCTTGG...TGTGGCTGACAGTCTCAGTTTGCCAGTCTTGGCAGTCAGGTCAGAAAGGGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR GCA 90 bp GGGACCTTTCCAGTTGGCGTTCCCATGGCTTTCTTGGGTGTCCAGCAGAGCTGTGAAGGAGCAAAAAGTTaGTCATTCTTCTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: GTFPVGVPMAFLGVQQSCEGAKS*SFFSRS
Trigger: GGACCTGGAGAAGAATGAGCAACTTTTTGCTCCTTC...ACAGCTCTGCTGGACACCCAAGAAAGCCATGGGAACGCCAACTGGAAAGGTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR GCA 90 bp GGCCAGGTGGCTTCTACTAATGCACTTCCTTGCTCTTCACAACAACCTGATGGGATTCCACCACCTGACTaGAGATACCTGTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GQVASTNALPCSSQQPDGIPPPD*RYLSSS
Trigger: GGAGCTGGACAGGTATCTGCAGTCAGGTGGTGGAAT...CCCATCAGGTTGTTGTGAAGAGCAAGGAAGTGCATTAGTAGAAGCCACCTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR GCA 90 bp TTGGGCGTTGTCATGGTACTTCTGGGCAAGCAGCTTGCGCCTCCAACTGAGAAAGAGGTGTTCCTGCACTaGCCCTCAAAGCAAATATGG +
Preference number: 4 (lower is better)
Translates to: LGVVMVLLGKQLAPPTEKEVFLH*PSKQIW
Trigger: CCATATTTGCTTTGAGGGGCAGTGCAGGAACACCTC...TTTCTCAGTTGGAGGCGCAAGCTGCTTGCCCAGAAGTACCATGACAACGCCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR GCA 90 bp TTTCCAGTTGGCGTTCCCATGGCTTTCTTGGGTGTCCAGCAGAGCTGTTATACATTGCCCTGGGGCGTCTaGAGCTTGAAAGTTGGGTTG +
Preference number: 4 (lower is better)
Translates to: FPVGVPMAFLGVQQSCYTLPWGV*SLKVGL
Trigger: CAACCCAACTTTCAAGCTGCAGACGCCCCAGGGCAA...TGTATAACAGCTCTGCTGGACACCCAAGAAAGCCATGGGAACGCCAACTGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR GCA 90 bp AAAAAGAAAATTCACATTGCCCTGGATCCCAGACACATACAAACGCACAGTGGAGCCTGGCACTGGGTTTaGCGGGAGTGCCTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: KKKIHIALDPRHIQTHSGAWHWV*RECLLG
Trigger: CCCCAGAAGGCACTCCCGGCAAACCCAGTGCCAGGC...TCCACTGTGCGTTTGTATGTGTCTGGGATCCAGGGCAATGTGAATTTTCTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR GCA 90 bp TTCCCATGGCTTTCTTGGGTGTCCAGCAGAGCTGTTATACACGTGGTTAACACACTCTCTTGCGTGCCCTaGACCCCAGGAGTGAATGGA +
Preference number: 4 (lower is better)
Translates to: FPWLSWVSSRAVIHVVNTLSCVP*TPGVNG
Trigger: TCCATTCACTCCTGGGGTGCAGGGCACGCAAGAGAG...TGTGTTAACCACGTGTATAACAGCTCTGCTGGACACCCAAGAAAGCCATGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR GCA 90 bp TTCACATTGCCCTGGATCCCAGACACATACAAACGCACAGTGGACGGTGTGAGAGGTTCAGATGGCTCATaGAGTCACTATGGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: FTLPWIPDTYKRTVDGVRGSDGS*SHYGCG
Trigger: GCCACAGCCATAGTGACTGCATGAGCCATCTGAACC...TCTCACACCGTCCACTGTGCGTTTGTATGTGTCTGGGATCCAGGGCAATGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp TGCAGGGGCAGGACTGAAGCCACCACAGCTCAGGATTCTAAGAATCACCTTTCATTGACTCCTCCAGACTaGTACACAGAGCACATGGCC +
Preference number: 4 (lower is better)
Translates to: CRGRTEATTAQDSKNHLSLTPPD*YTEHMA
Trigger: GGCCATGTGCTCTGTGTACCAGTCTGGAGGAGTCAA...TGAAAGGTGATTCTTAGAATCCTGAGCTGTGGTGGCTTCAGTCCTGCCCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp TCTTCCCACACTTCGCATCTCTCATGTTGCACTTCCTGTGTTCACCATTCATGTTCTCGTGGGCCATGGTaGCAGCCACGCCAATGGCAT +
Preference number: 4 (lower is better)
Translates to: SSHTSHLSCCTSCVHHSCSRGPW*QPRQWH
Trigger: ATGCCATTGGCGTGGCTGCCACCATGGCCCACGAGA...ACATGAATGGTGAACACAGGAAGTGCAACATGAGAGATGCGAAGTGTGGGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CCA 90 bp CTGGGCAAGCAGCTTGCGCCTCCAACTGAGAAAGGACCAGAGGGTAGAATATGGCAACATCCTGGTGTCTaGCATGTTGGAGAGACACAT +
Preference number: 4 (lower is better)
Translates to: LGKQLAPPTEKGPEGRIWQHPGV*HVGETH
Trigger: ATGTGTCTCTCCAACATGCCAGACACCAGGATGTTG...CCATATTCTACCCTCTGGTCCTTTCTCAGTTGGAGGCGCAAGCTGCTTGCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CCA 90 bp CTTCTACTAATGCACTTCCTTGCTCTTCACAACAACCTGATGGGGCTGGTACTATGGGTGCCCCGGCACTaGATCTGCCTCCCATTCATG +
Preference number: 4 (lower is better)
Translates to: LLLMHFLALHNNLMGLVLWVPRH*ICLPFM
Trigger: CATGAATGGGAGGCAGATCCAGTGCCGGGGCACCCA...TAGTACCAGCCCCATCAGGTTGTTGTGAAGAGCAAGGAAGTGCATTAGTAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp GGGGGTGACTTTGGAAATGTGGGCTTGGATTCTACAGAACCTCTCCTTCGCAGGAGGCAGTGGCAGTTCTaGTTGTTGTTACAGACCCCA +
Preference number: 4 (lower is better)
Translates to: GGDFGNVGLDSTEPLLRRRQWQF*LLLQTP
Trigger: TGGGGTCTGTAACAACAACCAGAACTGCCACTGCCT...CCTGCGAAGGAGAGGTTCTGTAGAATCCAAGCCCACATTTCCAAAGTCACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CCA 90 bp CCCACACTTCGCATCTCTCATGTTGCACTTCCTGTGTTCACCATTCATGTCCTTCCGCCAGCACCAAGATaGCCACCAACACTCCAGCTA +
Preference number: 4 (lower is better)
Translates to: PTLRISHVALPVFTIHVLPPAPR*PPTLQL
Trigger: TAGCTGGAGTGTTGGTGGCCATCTTGGTGCTGGCGG...AAGGACATGAATGGTGAACACAGGAAGTGCAACATGAGAGATGCGAAGTGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CCA 90 bp CCTTGCTCTTCACAACAACCTGATGGGGCTGGTACTACTGCTCATCATAGCCTCCTGCAGCTTGAAAGTTaGGTTGGCATGACCAGTCCC +
Preference number: 4 (lower is better)
Translates to: PCSSQQPDGAGTTAHHSLLQLES*VGMTSP
Trigger: GGGACTGGTCATGCCAACCCAACTTTCAAGCTGCAG...GAGGCTATGATGAGCAGTAGTACCAGCCCCATCAGGTTGTTGTGAAGAGCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp AGTCCCGCTGTTCTGAGAAACCCTGAAGGGACAACTGAACTGTTGCCTCAGCTTCTGCAGCTTGAAAGTTaGGTTGGCATGACCAGTCCC +
Preference number: 4 (lower is better)
Translates to: SPAVLRNPEGTTELLPQLLQLES*VGMTSP
Trigger: GGGACTGGTCATGCCAACCCAACTTTCAAGCTGCAG...AAGCTGAGGCAACAGTTCAGTTGTCCCTTCAGGGTTTCTCAGAACAGCGGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CCA 90 bp TTTCAAGAGCAAACAATTGCTCATGGCAGGATGGGAGGAGGCCCCAGGAAAGCCTCTCCCCTCCCTACCTaGGGCTGTATATTGCACAAA +
Preference number: 4 (lower is better)
Translates to: FQEQTIAHGRMGGGPRKASPLPT*GCILHK
Trigger: TTTGTGCAATATACAGCCCCAGGTAGGGAGGGGAGA...GGCTTTCCTGGGGCCTCCTCCCATCCTGCCATGAGCAATTGTTTGCTCTTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp GGGGTGACTTTGGAAATGTGGGCTTGGATTCTACAGAACCTCTCCTTCGCAGGCAGCACCTTTGTGGAGTaGGAGTCTATCTCCCAGCAA +
Preference number: 4 (lower is better)
Translates to: GVTLEMWAWILQNLSFAGSTFVE*ESISQQ
Trigger: TTGCTGGGAGATAGACTCCCACTCCACAAAGGTGCT...GCCTGCGAAGGAGAGGTTCTGTAGAATCCAAGCCCACATTTCCAAAGTCACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp GGTGTGAGAGGACGCGTTGGGGGTGACTTTGGAAATGTGGGCTTGGATTCTACAAAGCTCTGTGAGGCATaGGGTTGGGTTTTGAGGATG +
Preference number: 4 (lower is better)
Translates to: GVRGRVGGDFGNVGLDSTKLCEA*GWVLRM
Trigger: CATCCTCAAAACCCAACCCCATGCCTCACAGAGCTT...TGTAGAATCCAAGCCCACATTTCCAAAGTCACCCCCAACGCGTCCTCTCACACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp TTTCCAGTTGGCGTTCCCATGGCTTTCTTGGGTGTCCAGCAGAGCTGTTATACAACCCAGGTCTCTTTCTaGTGTGGTTCCAGGGAGGGT +
Preference number: 4 (lower is better)
Translates to: FPVGVPMAFLGVQQSCYTTQVSF*CGSREG
Trigger: ACCCTCCCTGGAACCACACCAGAAAGAGACCTGGGT...TGTATAACAGCTCTGCTGGACACCCAAGAAAGCCATGGGAACGCCAACTGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp TTTCAAGAGCAAACAATTGCTCATGGCAGGATGGGAGGAGGCCCCAGGAAAGCCTTCCCATGGCTTTCTTaGGTGTCCAGCAGAGCTGTT +
Preference number: 4 (lower is better)
Translates to: FQEQTIAHGRMGGGPRKAFPWLS*VSSRAV
Trigger: AACAGCTCTGCTGGACACCCAAGAAAGCCATGGGAA...GGCTTTCCTGGGGCCTCCTCCCATCCTGCCATGAGCAATTGTTTGCTCTTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR TCA 90 bp TGGGCTTCCAAGGAAGCCGAGGAGGCACTGAGTCAACAGGGAGATTTTTGGAGATTCCGTGTGGTGGTTTaGGGGTTACCACTTGAAGTA +
Preference number: 4 (lower is better)
Translates to: WASKEAEEALSQQGDFWRFRVVV*GLPLEV
Trigger: TACTTCAAGTGGTAACCCTCAAACCACCACACGGAA...TCTCCAAAAATCTCCCTGTTGACTCAGTGCCTCCTCGGCTTCCTTGGAAGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR TCA 90 bp GGTGTGAGAGGACGCGTTGGGGGTGACTTTGGAAATGTGGGCTTGGATTCTACATCCTGTTGCATCCATTaGACACTTTGGGAAAGGGGT +
Preference number: 4 (lower is better)
Translates to: GVRGRVGGDFGNVGLDSTSCCIH*TLWERG
Trigger: ACCCCTTTCCCAAAGTGTTCAATGGATGCAACAGGA...TGTAGAATCCAAGCCCACATTTCCAAAGTCACCCCCAACGCGTCCTCTCACACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR TCA 90 bp CTTCTACTAATGCACTTCCTTGCTCTTCACAACAACCTGATGGGGCTGGTACTAGGGGCGTCTGCAGCTTaGAAGTTGGGTTGGCATGAC +
Preference number: 4 (lower is better)
Translates to: LLLMHFLALHNNLMGLVLGASAA*KLGWHD
Trigger: GTCATGCCAACCCAACTTTCAAGCTGCAGACGCCCC...TAGTACCAGCCCCATCAGGTTGTTGTGAAGAGCAAGGAAGTGCATTAGTAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR TCA 90 bp GACAGGGCACTAAATCCCTTGAGGTTTGTTTTAGAGATGGCTCCAAGGCCCTTATCCAGTGGCCGACTGTaGGAGAGGACTCTGACTTGT +
Preference number: 4 (lower is better)
Translates to: DRALNPLRFVLEMAPRPLSSGRL*ERTLTC
Trigger: ACAAGTCAGAGTCCTCTCTCACAGTCGGCCACTGGA...TAAGGGCCTTGGAGCCATCTCTAAAACAAACCTCAAGGGATTTAGTGCCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR TCA 90 bp TTCCAGTTGGCGTTCCCATGGCTTTCTTGGGTGTCCAGCAGAGCTGTTATACACGCCTCAGCCTTGCAGTaGGGTTTTCAAGAGCAAACA +
Preference number: 4 (lower is better)
Translates to: FQLAFPWLSWVSSRAVIHASALQ*GFQEQT
Trigger: TGTTTGCTCTTGAAAACCTCACTGCAAGGCTGAGGC...GTGTATAACAGCTCTGCTGGACACCCAAGAAAGCCATGGGAACGCCAACTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR TCA 90 bp CAGCATGAGGACCGCCAGCACCAAGATGGCCACCAACACTCCAGCTACCACAGGTATTCTAATCCTCATTaGCCTGTAGAAGGCCATATT +
Preference number: 4 (lower is better)
Translates to: QHEDRQHQDGHQHSSYHRYSNPH*PVEGHI
Trigger: AATATGGCCTTCTACAGGTCAATGAGGATTAGAATA...CCTGTGGTAGCTGGAGTGTTGGTGGCCATCTTGGTGCTGGCGGTCCTCATGCTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR TCA 90 bp CTCCCGCAGGCCAGGTGGCTTCTACTAATGCACTTCCTTGCTCTTCACAACAACGGGCACCAAGAAACATaGATGTTTTGCCCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: LPQARWLLLMHFLALHNNGHQET*MFCPWL
Trigger: AAGCCAAGGGCAAAACATTCATGTTTCTTGGTGCCC...GTTGTTGTGAAGAGCAAGGAAGTGCATTAGTAGAAGCCACCTGGCCTGCGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR TCA 90 bp CCCTTCCCTGCTAAGGCAGCAGCACAGTCCATAGTTTTCTCAATGCCTCGTGGGGAATCACCTTTCACATaGAGCCAAAACTCCACAGTC +
Preference number: 4 (lower is better)
Translates to: PFPAKAAAQSIVFSMPRGESPFT*SQNSTV
Trigger: GACTGTGGAGTTTTGGCTTCATGTGAAAGGTGATTC...CCCACGAGGCATTGAGAAAACTATGGACTGTGCTGCTGCCTTAGCAGGGAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR GCA 90 bp ACTGCCAAGACTGGCAAACTGAGACTGTCAGCCACACAGAAGAAGTACGAGGAGATGATAAGTTCATGCTaGAGCTTGGGGCTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: TAKTGKLRLSATQKKYEEMISSC*SLGLPS
Trigger: GGAAGGCAGCCCCAAGCTGCAGCATGAACTTATCAT...CTCCTCGTACTTCTTCTGTGTGGCTGACAGTCTCAGTTTGCCAGTCTTGGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR GCA 90 bp CAATGCCTCGTGGGAATACAGCATGGTCAGCCAGCTTCTTCACCTCATCCCTTTGAGGTGTTCCTGCACTaGCCCTCAAAGCAAATATGG +
Preference number: 4 (lower is better)
Translates to: QCLVGIQHGQPASSPHPFEVFLH*PSKQIW
Trigger: CCATATTTGCTTTGAGGGGCAGTGCAGGAACACCTC...AAAGGGATGAGGTGAAGAAGCTGGCTGACCATGCTGTATTCCCACGAGGCATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR GCA 90 bp GACAGGGCACTAAATCCCTTGAGGTTTGTTTTAGAGATGGCTCCAAGGCCCTTAGTCTGGAGGAGAAGCTaGCAGTCACCCTCCTCATAC +
Preference number: 4 (lower is better)
Translates to: DRALNPLRFVLEMAPRPLVWRRS*QSPSSY
Trigger: GTATGAGGAGGGTGACTGGCAGCTTCTCCTCCAGAC...TAAGGGCCTTGGAGCCATCTCTAAAACAAACCTCAAGGGATTTAGTGCCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR GCA 90 bp GGTGTGAGAGGACGCGTTGGGGGTGACTTTGGAAATGTGGGCTTGGATTCTACATCAAGAGCAAACAATTaGTCATGGCAGGATGGGAGG +
Preference number: 4 (lower is better)
Translates to: GVRGRVGGDFGNVGLDSTSRANN*SWQDGR
Trigger: CCTCCCATCCTGCCATGAGCAATTGTTTGCTCTTGA...TGTAGAATCCAAGCCCACATTTCCAAAGTCACCCCCAACGCGTCCTCTCACACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp AAAGTCTATCAAATTCCAAAACATTCCACCATCTTCCAGTTCACAGTACAACTTCGCCCCCTGGCATGGTaGCGGCGGCCCTTAGCGCTC +
Preference number: 4 (lower is better)
Translates to: KVYQIPKHSTIFQFTVQLRPLAW*RRPLAL
Trigger: GAGCGCTAAGGGCCGCCGCCACCATGCCAGGGGGCG...AAGTTGTACTGTGAACTGGAAGATGGTGGAATGTTTTGGAATTTGATAGACTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp CAATGCCTCGTGGGAATACAGCATGGTCAGCCAGCTTCTTCACCTCATCCCTTTCCTCCAATTTCCGTGTaGTGGTTTGAGGGTTACCAC +
Preference number: 4 (lower is better)
Translates to: QCLVGIQHGQPASSPHPFPPISV*WFEGYH
Trigger: GTGGTAACCCTCAAACCACCACACGGAAATTGGAGG...AAAGGGATGAGGTGAAGAAGCTGGCTGACCATGCTGTATTCCCACGAGGCATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp AAAAAGAAAATTCACATTGCCCTGGATCCCAGACACATACAAACGCACAGTGGACCCAGTCCCTGGTGGTaGGCTTGGAGTGCTCGAACC +
Preference number: 4 (lower is better)
Translates to: KKKIHIALDPRHIQTHSGPSPWW*AWSART
Trigger: GGTTCGAGCACTCCAAGCCCACCACCAGGGACTGGG...TCCACTGTGCGTTTGTATGTGTCTGGGATCCAGGGCAATGTGAATTTTCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp CCTGCTAAGGCAGCAGCACAGTCCATAGTTTTCTCAATGCCTCGTGGGAATACATTGTCATGGTACTTCTaGGCAAGCAGCTTGCGCCTC +
Preference number: 4 (lower is better)
Translates to: PAKAAAQSIVFSMPRGNTLSWYF*ASSLRL
Trigger: GAGGCGCAAGCTGCTTGCCCAGAAGTACCATGACAA...TGTATTCCCACGAGGCATTGAGAAAACTATGGACTGTGCTGCTGCCTTAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp GACCTTAAGATCTGCAAGTGTCTCAGAGCTGGGGCAGAAAAAGGCTTTACTTTTTCTCGTGGGCCATGGTaGCAGCCACGCCAATGGCAT +
Preference number: 4 (lower is better)
Translates to: DLKICKCLRAGAEKGFTFSRGPW*QPRQWH
Trigger: ATGCCATTGGCGTGGCTGCCACCATGGCCCACGAGA...AAAAGTAAAGCCTTTTTCTGCCCCAGCTCTGAGACACTTGCAGATCTTAAGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp TGGGCTTCCAAGGAAGCCGAGGAGGCACTGAGTCAACAGGGAGATTTTTGGAGACAACATCCTGGTGTCTaGCATGTTGGAGAGACACAT +
Preference number: 4 (lower is better)
Translates to: WASKEAEEALSQQGDFWRQHPGV*HVGETH
Trigger: ATGTGTCTCTCCAACATGCCAGACACCAGGATGTTG...TCTCCAAAAATCTCCCTGTTGACTCAGTGCCTCCTCGGCTTCCTTGGAAGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp CTCCCGCAGGCCAGGTGGCTTCTACTAATGCACTTCCTTGCTCTTCACAACAACCAACATCCTGGTGTCTaGCATGTTGGAGAGACACAT +
Preference number: 4 (lower is better)
Translates to: LPQARWLLLMHFLALHNNQHPGV*HVGETH
Trigger: ATGTGTCTCTCCAACATGCCAGACACCAGGATGTTG...GTTGTTGTGAAGAGCAAGGAAGTGCATTAGTAGAAGCCACCTGGCCTGCGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp TTGGGCGTTGTCATGGTACTTCTGGGCAAGCAGCTTGCGCCTCCAACTGAGAAACTCCATACAACATCCTaGTGTCTGGCATGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: LGVVMVLLGKQLAPPTEKLHTTS*CLACWR
Trigger: TCTCCAACATGCCAGACACCAGGATGTTGTATGGAG...TTTCTCAGTTGGAGGCGCAAGCTGCTTGCCCAGAAGTACCATGACAACGCCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CCA 90 bp TTAATAGGTGGACAAGAGAGAAGAAGATCTGTTTTCCGTGAACAATCTCCCAAACAATGGGCACCGCGTTaGACTCCAGGGGCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: LIGGQERRRSVFREQSPKQWAPR*TPGAGP
Trigger: AGGCCCGGCCCCTGGAGTCCAACGCGGTGCCCATTG...TTTGGGAGATTGTTCACGGAAAACAGATCTTCTTCTCTCTTGTCCACCTATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CCA 90 bp GAAAATTCACATTGCCCTGGATCCCAGACACATACAAACGCACAGTGGACGGTGCTGCAGCTTGAAAGTTaGGTTGGCATGACCAGTCCC +
Preference number: 4 (lower is better)
Translates to: ENSHCPGSQTHTNAQWTVLQLES*VGMTSP
Trigger: GGGACTGGTCATGCCAACCCAACTTTCAAGCTGCAG...CACCGTCCACTGTGCGTTTGTATGTGTCTGGGATCCAGGGCAATGTGAATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CCA 90 bp TTCACATTGCCCTGGATCCCAGACACATACAAACGCACAGTGGACGGTGTGAGAGGCCTGGAGAAGTCCTaGGAAACGATGCAATTTGGT +
Preference number: 4 (lower is better)
Translates to: FTLPWIPDTYKRTVDGVRGLEKS*ETMQFG
Trigger: ACCAAATTGCATCGTTTCCCAGGACTTCTCCAGGCC...TCTCACACCGTCCACTGTGCGTTTGTATGTGTCTGGGATCCAGGGCAATGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CCA 90 bp TTTCCAGTTGGCGTTCCCATGGCTTTCTTGGGTGTCCAGCAGAGCTGTTATACAAGGAGTCGCAACCTTTaGCATCACGGCTCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: FPVGVPMAFLGVQQSCYTRSRNL*HHGSEE
Trigger: TTCCTCTGAGCCGTGATGCCAAAGGTTGCGACTCCT...TGTATAACAGCTCTGCTGGACACCCAAGAAAGCCATGGGAACGCCAACTGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp GACAGGGCACTAAATCCCTTGAGGTTTGTTTTAGAGATGGCTCCAAGGCCCTTAGTGAGGGAAATCCAGTaGCCGACTGTGAGAGAGGAC +
Preference number: 4 (lower is better)
Translates to: DRALNPLRFVLEMAPRPLVREIQ*PTVRED
Trigger: GTCCTCTCTCACAGTCGGCCACTGGATTTCCCTCAC...TAAGGGCCTTGGAGCCATCTCTAAAACAAACCTCAAGGGATTTAGTGCCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp GACAGGGCACTAAATCCCTTGAGGTTTGTTTTAGAGATGGCTCCAAGGCCCTTAGCGTATTGCAGGAGGTaGGGAGGGGCTATTGCTTCA +
Preference number: 4 (lower is better)
Translates to: DRALNPLRFVLEMAPRPLAYCRR*GGAIAS
Trigger: TGAAGCAATAGCCCCTCCCCACCTCCTGCAATACGC...TAAGGGCCTTGGAGCCATCTCTAAAACAAACCTCAAGGGATTTAGTGCCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR TCA 90 bp GAAAATTCACATTGCCCTGGATCCCAGACACATACAAACGCACAGTGGACGGTGAGTTGGCGATCTCTATaGGCTTGTGTTTGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: ENSHCPGSQTHTNAQWTVSWRSL*ACVWWR
Trigger: ACGCCACCAAACACAAGCTCATAGAGATCGCCAACT...CACCGTCCACTGTGCGTTTGTATGTGTCTGGGATCCAGGGCAATGTGAATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR TCA 90 bp CCTTCAGTTTCAAAGAAGGAGGTGTTCCTGCACTGCCCCTCAAAGCAAATATGGGGATTTCCGGAGTGTTaGTCACCTTTCGCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: PSVSKKEVFLHCPSKQIWGFPEC*SPFACP
Trigger: AGGGCAAGCGAAAGGTGATCAACACTCCGGAAATCC...CCATATTTGCTTTGAGGGGCAGTGCAGGAACACCTCCTTCTTTGAAACTGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR TCA 90 bp GACCTTAAGATCTGCAAGTGTCTCAGAGCTGGGGCAGAAAAAGGCTTTACTTTTCCTGCACCCCAGGAGTaGATGGATGGCTTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: DLKICKCLRAGAEKGFTFPAPQE*MDGFCK
Trigger: CTTGCAGAAGCCATCCATTCACTCCTGGGGTGCAGG...AAAAGTAAAGCCTTTTTCTGCCCCAGCTCTGAGACACTTGCAGATCTTAAGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR TCA 90 bp GACCTTAAGATCTGCAAGTGTCTCAGAGCTGGGGCAGAAAAAGGCTTTACTTTTACTCCTGAGAGCCAGTaGGGGAAATCCAGTGGCCGA +
Preference number: 4 (lower is better)
Translates to: DLKICKCLRAGAEKGFTFTPESQ*GKSSGR
Trigger: TCGGCCACTGGATTTCCCTCACTGGCTCTCAGGAGT...AAAAGTAAAGCCTTTTTCTGCCCCAGCTCTGAGACACTTGCAGATCTTAAGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR TCA 90 bp TTCCCATGGCTTTCTTGGGTGTCCAGCAGAGCTGTTATACACGTGGTTAACACAAGAGCTCTCTTTCTGTaGGGGTCAGGTAAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: FPWLSWVSSRAVIHVVNTRALFL*GSGKGS
Trigger: ACTGCCCTTACCTGACCCTCACAGAAAGAGAGCTCT...TGTGTTAACCACGTGTATAACAGCTCTGCTGGACACCCAAGAAAGCCATGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR TCA 90 bp AAGTCAATGACCAGCCTGCTCCCTCGTGTGTACTTTGTAAATAGCTGGGCTCCCTCACTAACCCAAACTTaGGTTAAGCTTCCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: KSMTSLLPRVYFVNSWAPSLTQT*VKLPSS
Trigger: GGAGGAGGGAAGCTTAACTCAAGTTTGGGTTAGTGA...GGGAGCCCAGCTATTTACAAAGTACACACGAGGGAGCAGGCTGGTCATTGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR TCA 90 bp TTCCAGTTGGCGTTCCCATGGCTTTCTTGGGTGTCCAGCAGAGCTGTTATACACAGAAGTCAGCAAGGCTaGAAGGAATCTATGGCTAGC +
Preference number: 4 (lower is better)
Translates to: FQLAFPWLSWVSSRAVIHRSQQG*KESMAS
Trigger: GCTAGCCATAGATTCCTTTCAGCCTTGCTGACTTCT...GTGTATAACAGCTCTGCTGGACACCCAAGAAAGCCATGGGAACGCCAACTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR GCA 90 bp CAGACCTTAAGATCTGCAAGTGTCTCAGAGCTGGGGCAGAAAAAGGCTTTACTTGGCCGAGCAGCAATCTaGAGAATCATGGGTCATGCC +
Preference number: 4 (lower is better)
Translates to: QTLRSASVSELGQKKALLGRAAI*RIMGHA
Trigger: GGCATGACCCATGATTCTGCAGATTGCTGCTCGGCC...AAGTAAAGCCTTTTTCTGCCCCAGCTCTGAGACACTTGCAGATCTTAAGGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR GCA 90 bp CAAACTAGTAAAACCAGCAACTTGGTCTTGATTCCTGGTTCTATTCTAATCCTCGCCCACTGTCGATACTaGCCCCGTGGCCCGGTGTGT +
Preference number: 4 (lower is better)
Translates to: QTSKTSNLVLIPGSILILAHCRY*PRGPVC
Trigger: ACACACCGGGCCACGGGGGCAGTATCGACAGTGGGC...GAGGATTAGAATAGAACCAGGAATCAAGACCAAGTTGCTGGTTTTACTAGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CCA 90 bp AGAAGGAGGTGTTCCTGCACTGCCCCTCAAAGCAAATATGGTTGTAGCCACACTCCTCCAATTTCCGTGTaGTGGTTTGAGGGTTACCAC +
Preference number: 4 (lower is better)
Translates to: RRRCSCTAPQSKYGCSHTPPISV*WFEGYH
Trigger: GTGGTAACCCTCAAACCACCACACGGAAATTGGAGG...AGTGTGGCTACAACCATATTTGCTTTGAGGGGCAGTGCAGGAACACCTCCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CCA 90 bp AGAAGGAGGTGTTCCTGCACTGCCCCTCAAAGCAAATATGGTTGTAGCCACACTAATTGGGCGTTGTCATaGTACTTCTGGGCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: RRRCSCTAPQSKYGCSHTNWALS*YFWASS
Trigger: GCTGCTTGCCCAGAAGTACCATGACAACGCCCAATT...AGTGTGGCTACAACCATATTTGCTTTGAGGGGCAGTGCAGGAACACCTCCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CCA 90 bp TCTCCAGGTGCTTTGCAAAAACCGTCCTATCTAGCAAAGCACCACACGGCCCTCCAATCTGCAGAATCATaGGTCATGCCAAAGTTGTGG +
Preference number: 4 (lower is better)
Translates to: SPGALQKPSYLAKHHTALQSAES*VMPKLW
Trigger: CCACAACTTTGGCATGACCCATGATTCTGCAGATTG...GAGGGCCGTGTGGTGCTTTGCTAGATAGGACGGTTTTTGCAAAGCACCTGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp GTTGGGGGTGACTTTGGAAATGTGGGCTTGGATTCTACAGAACCTCTCCTTCGCTTGTTACAGACCCCATaGCCATTGCACTTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: VGGDFGNVGLDSTEPLLRLLQTP*PLHFFP
Trigger: TGGGAAGAAGTGCAATGGCCATGGGGTCTGTAACAA...GCGAAGGAGAGGTTCTGTAGAATCCAAGCCCACATTTCCAAAGTCACCCCCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CCA 90 bp TTCACATTGCCCTGGATCCCAGACACATACAAACGCACAGTGGACGGTGTGAGATTGTTACAGACCCCATaGCCATTGCACTTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: FTLPWIPDTYKRTVDGVRLLQTP*PLHFFP
Trigger: TGGGAAGAAGTGCAATGGCCATGGGGTCTGTAACAA...TCTCACACCGTCCACTGTGCGTTTGTATGTGTCTGGGATCCAGGGCAATGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CCA 90 bp GACCTTAAGATCTGCAAGTGTCTCAGAGCTGGGGCAGAAAAAGGCTTTACTTTTCCGCCAGCACCAAGATaGCCACCAACACTCCAGCTA +
Preference number: 4 (lower is better)
Translates to: DLKICKCLRAGAEKGFTFPPAPR*PPTLQL
Trigger: TAGCTGGAGTGTTGGTGGCCATCTTGGTGCTGGCGG...AAAAGTAAAGCCTTTTTCTGCCCCAGCTCTGAGACACTTGCAGATCTTAAGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp CTGGTACTACTGCTCATCATAGCCTCTGTACAAATGAGGAAACAGACTCAAGAGCCGCCAGCACCAAGATaGCCACCAACACTCCAGCTA +
Preference number: 4 (lower is better)
Translates to: LVLLLIIASVQMRKQTQEPPAPR*PPTLQL
Trigger: TAGCTGGAGTGTTGGTGGCCATCTTGGTGCTGGCGG...CTCTTGAGTCTGTTTCCTCATTTGTACAGAGGCTATGATGAGCAGTAGTACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp CAGACCTTAAGATCTGCAAGTGTCTCAGAGCTGGGGCAGAAAAAGGCTTTACTTACTGTTGCCTCAGCTTaGAAGGGAGAGCTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: QTLRSASVSELGQKKALLTVASA*KGELRA
Trigger: AGCCCTCAGCTCTCCCTTCCAAGCTGAGGCAACAGT...AAGTAAAGCCTTTTTCTGCCCCAGCTCTGAGACACTTGCAGATCTTAAGGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp ATCATAGCCTCTGTACAAATGAGGAAACAGACTCAAGAGGGACTTGCTCAGGGTACTGTTGCCTCAGCTTaGAAGGGAGAGCTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: IIASVQMRKQTQEGLAQGTVASA*KGELRA
Trigger: AGCCCTCAGCTCTCCCTTCCAAGCTGAGGCAACAGT...ACCCTGAGCAAGTCCCTCTTGAGTCTGTTTCCTCATTTGTACAGAGGCTATGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp TCTTCCCACACTTCGCATCTCTCATGTTGCACTTCCTGTGTTCACCATTCATGTACTGTTGCCTCAGCTTaGAAGGGAGAGCTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: SSHTSHLSCCTSCVHHSCTVASA*KGELRA
Trigger: AGCCCTCAGCTCTCCCTTCCAAGCTGAGGCAACAGT...ACATGAATGGTGAACACAGGAAGTGCAACATGAGAGATGCGAAGTGTGGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CCA 90 bp AAAAAGAAAATTCACATTGCCCTGGATCCCAGACACATACAAACGCACAGTGGATGGCAGTGGTGCAGGTaGGGACCCACCACGCAGATA +
Preference number: 4 (lower is better)
Translates to: KKKIHIALDPRHIQTHSGWQWCR*GPTTQI
Trigger: TATCTGCGTGGTGGGTCCCCACCTGCACCACTGCCA...TCCACTGTGCGTTTGTATGTGTCTGGGATCCAGGGCAATGTGAATTTTCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CCA 90 bp TTAATAGGTGGACAAGAGAGAAGAAGATCTGTTTTCCGTGAACAATCTCCCAAACAGGTGAGCTGGCAGTaGTGCAGGTGGGGACCCACC +
Preference number: 4 (lower is better)
Translates to: LIGGQERRRSVFREQSPKQVSWQ*CRWGPT
Trigger: GGTGGGTCCCCACCTGCACCACTGCCAGCTCACCTG...TTTGGGAGATTGTTCACGGAAAACAGATCTTCTTCTCTCTTGTCCACCTATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CCA 90 bp GTTGGGGGTGACTTTGGAAATGTGGGCTTGGATTCTACAGAACCTCTCCTTCGCCAACAGGGAGATTTTTaGAGATGTGGAGGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: VGGDFGNVGLDSTEPLLRQQGDF*RCGGSW
Trigger: CCAGGAACCTCCACATCTCCAAAAATCTCCCTGTTG...GCGAAGGAGAGGTTCTGTAGAATCCAAGCCCACATTTCCAAAGTCACCCCCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp AAAAGAAAATTCACATTGCCCTGGATCCCAGACACATACAAACGCACAGTGGACCAGTGCAGCTGCTGCTaGCTGCCTTCTCCAGTGATC +
Preference number: 4 (lower is better)
Translates to: KRKFTLPWIPDTYKRTVDQCSCC*LPSPVI
Trigger: GATCACTGGAGAAGGCAGCCAGCAGCAGCTGCACTG...GTCCACTGTGCGTTTGTATGTGTCTGGGATCCAGGGCAATGTGAATTTTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp GAGGACGCGTTGGGGGTGACTTTGGAAATGTGGGCTTGGATTCTACAGAACCTCTTGGAAATGTGGGCTTaGATTCTACAGAACCTCTCC +
Preference number: 4 (lower is better)
Translates to: EDALGVTLEMWAWILQNLLEMWA*ILQNLS
Trigger: GGAGAGGTTCTGTAGAATCCAAGCCCACATTTCCAA...GAGGTTCTGTAGAATCCAAGCCCACATTTCCAAAGTCACCCCCAACGCGTCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CCA 90 bp AGAAGGAGGTGTTCCTGCACTGCCCCTCAAAGCAAATATGGTTGTAGCCACACTAACAACAGTTCCACTTaGCTGGGGAGCCCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: RRRCSCTAPQSKYGCSHTNNSST*LGSPQN
Trigger: ATTCTGAGGGCTCCCCAGCCAAGTGGAACTGTTGTT...AGTGTGGCTACAACCATATTTGCTTTGAGGGGCAGTGCAGGAACACCTCCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CCA 90 bp CAATGCCTCGTGGGAATACAGCATGGTCAGCCAGCTTCTTCACCTCATCCCTTTTTTCTCAATGCCTCGTaGGAATACAGCATGGTCAGC +
Preference number: 4 (lower is better)
Translates to: QCLVGIQHGQPASSPHPFFLNAS*EYSMVS
Trigger: GCTGACCATGCTGTATTCCCACGAGGCATTGAGAAA...AAAGGGATGAGGTGAAGAAGCTGGCTGACCATGCTGTATTCCCACGAGGCATTG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000517905.1
3UTR CAA 72 bp TGGGAGTCTATCTCCCAGCAAACATCTCCAGGTGCTTaGCAAAAACCGTCCTATCTAGCAAAGCACCACACG +
Preference number: 4 (lower is better)
Translates to: WESISQQTSPGA*QKPSYLAKHHT
Trigger: CGTGTGGTGCTTTGCTAGATAGGACGGTTTTTGCAAAGCACCTGGAGATGTTTGCTGGGAGATAGACTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR TCA 90 bp CCTTCAGTTTCAAAGAAGGAGGTGTTCCTGCACTGCCCCTCAAAGCAAATATGGTCTCACGGGGCTTTCTaGAGTCTTCCACTGAGGTAT +
Preference number: 4 (lower is better)
Translates to: PSVSKKEVFLHCPSKQIWSHGAF*SLPLRY
Trigger: ATACCTCAGTGGAAGACTTCAGAAAGCCCCGTGAGA...CCATATTTGCTTTGAGGGGCAGTGCAGGAACACCTCCTTCTTTGAAACTGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR TCA 90 bp CTGGTACTACTGCTCATCATAGCCTCTGTACAAATGAGGAAACAGACTCAAGAGCGGAGTGGTCCATGTTaGCTCCTCCAGACTGGTACA +
Preference number: 4 (lower is better)
Translates to: LVLLLIIASVQMRKQTQERSGPC*LLQTGT
Trigger: TGTACCAGTCTGGAGGAGTCAACATGGACCACTCCG...CTCTTGAGTCTGTTTCCTCATTTGTACAGAGGCTATGATGAGCAGTAGTACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR TCA 90 bp CAGACCTTAAGATCTGCAAGTGTCTCAGAGCTGGGGCAGAAAAAGGCTTTACTTGAGCTATCTACCTCCTaGTGTGAGGGAGAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: QTLRSASVSELGQKKALLELSTS*CEGERL
Trigger: CAGCCTTTCTCCCTCACATCAGGAGGTAGATAGCTC...AAGTAAAGCCTTTTTCTGCCCCAGCTCTGAGACACTTGCAGATCTTAAGGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR GCA 90 bp GACAGGGCACTAAATCCCTTGAGGTTTGTTTTAGAGATGGCTCCAAGGCCCTTAGGTATGATAAGTTCATaGTGCAGCTTGGGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: DRALNPLRFVLEMAPRPLGMISS*CSLGLP
Trigger: AGGCAGCCCCAAGCTGCAGCATGAACTTATCATACC...TAAGGGCCTTGGAGCCATCTCTAAAACAAACCTCAAGGGATTTAGTGCCCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR GCA 90 bp GGGGACCTTTCCAGTTGGCGTTCCCATGGCTTTCTTGGGTGTCCAGCAGAGCTGATTAGTAGAACTGGTTaGCGAAAGTCTATCAAATTC +
Preference number: 4 (lower is better)
Translates to: GDLSSWRSHGFLGCPAELISRTG*RKSIKF
Trigger: GAATTTGATAGACTTTCGGCAACCAGTTCTACTAAT...CAGCTCTGCTGGACACCCAAGAAAGCCATGGGAACGCCAACTGGAAAGGTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR GCA 90 bp GGGGTGACTTTGGAAATGTGGGCTTGGATTCTACAGAACCTCTCCTTCGCAGGCCCCCAGTTTTCAAATTaGAAGTCTTCCATACCCTCT +
Preference number: 4 (lower is better)
Translates to: GVTLEMWAWILQNLSFAGPQFSN*KSSIPS
Trigger: AGAGGGTATGGAAGACTTGCAATTTGAAAACTGGGG...GCCTGCGAAGGAGAGGTTCTGTAGAATCCAAGCCCACATTTCCAAAGTCACCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR GCA 90 bp CAAGACTGGCAAACTGAGACTGTCAGCCACACAGAAGAAGTACGAGGAGGGGCCACTAATGCACTTCCTTaGTCTTCACAACAACCTGAT +
Preference number: 4 (lower is better)
Translates to: QDWQTETVSHTEEVRGGATNALP*SSQQPD
Trigger: ATCAGGTTGTTGTGAAGAGCAAGGAAGTGCATTAGT...GGCCCCTCCTCGTACTTCTTCTGTGTGGCTGACAGTCTCAGTTTGCCAGTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp TTCCCATGGCTTTCTTGGGTGTCCAGCAGAGCTGTTATACACGTGGTTAACACAAATTGGGCGTTGTCATaGTACTTCTGGGCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: FPWLSWVSSRAVIHVVNTNWALS*YFWASS
Trigger: GCTGCTTGCCCAGAAGTACCATGACAACGCCCAATT...TGTGTTAACCACGTGTATAACAGCTCTGCTGGACACCCAAGAAAGCCATGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp TTCCAGTTGGCGTTCCCATGGCTTTCTTGGGTGTCCAGCAGAGCTGTTATACACATGCCCGTGATTAATTaGGCGTTGTCATGGTACTTC +
Preference number: 4 (lower is better)
Translates to: FQLAFPWLSWVSSRAVIHMPVIN*ALSWYF
Trigger: GAAGTACCATGACAACGCCCAATTAATCACGGGCAT...GTGTATAACAGCTCTGCTGGACACCCAAGAAAGCCATGGGAACGCCAACTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp TCATCCCTTTCTGACCTGACTGCCAAGACTGGCAAACTGAGACTGTCAGCCACAATGCCCGTGATTAATTaGGCGTTGTCATGGTACTTC +
Preference number: 4 (lower is better)
Translates to: SSLSDLTAKTGKLRLSATMPVIN*ALSWYF
Trigger: GAAGTACCATGACAACGCCCAATTAATCACGGGCAT...TGTGGCTGACAGTCTCAGTTTGCCAGTCTTGGCAGTCAGGTCAGAAAGGGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp AAAGTCTATCAAATTCCAAAACATTCCACCATCTTCCAGTTCACAGTACAACTTGGAGGTCACACTGCCTaGCCTGCTCGCGGCACAGGG +
Preference number: 4 (lower is better)
Translates to: KVYQIPKHSTIFQFTVQLGGHTA*PARGTG
Trigger: CCCTGTGCCGCGAGCAGGCCAGGCAGTGTGACCTCC...AAGTTGTACTGTGAACTGGAAGATGGTGGAATGTTTTGGAATTTGATAGACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp AAGATTTACCTACATCCCCATCTGCACAAAGAGCTTGCTAACTCACTAACCCAAAGTCATCACCAGCCCTaGGTCCAGCATGTCACCCTC +
Preference number: 4 (lower is better)
Translates to: KIYLHPHLHKELANSLTQSHHQP*VQHVTL
Trigger: GAGGGTGACATGCTGGACCCAGGGCTGGTGATGACT...TTGGGTTAGTGAGTTAGCAAGCTCTTTGTGCAGATGGGGATGTAGGTAAATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp CCTGCTAAGGCAGCAGCACAGTCCATAGTTTTCTCAATGCCTCGTGGGAATACAGCTGAGGGCTTGAGTTaGCCTAGTTTGTTGTTCTGT +
Preference number: 4 (lower is better)
Translates to: PAKAAAQSIVFSMPRGNTAEGLS*PSLLFC
Trigger: ACAGAACAACAAACTAGGCCAACTCAAGCCCTCAGC...TGTATTCCCACGAGGCATTGAGAAAACTATGGACTGTGCTGCTGCCTTAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp CAAACTAGTAAAACCAGCAACTTGGTCTTGATTCCTGGTTCTATTCTAATCCTCGGGAATTGGCCGGCTTaGAGGAGGCCTCCTGGACGA +
Preference number: 4 (lower is better)
Translates to: QTSKTSNLVLIPGSILILGNWPA*RRPPGR
Trigger: TCGTCCAGGAGGCCTCCTCCAAGCCGGCCAATTCCC...GAGGATTAGAATAGAACCAGGAATCAAGACCAAGTTGCTGGTTTTACTAGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CCA 90 bp GACAGGGCACTAAATCCCTTGAGGTTTGTTTTAGAGATGGCTCCAAGGCCCTTAGGCCTGGAGAAGTCCTaGGAAACGATGCAATTTGGT +
Preference number: 4 (lower is better)
Translates to: DRALNPLRFVLEMAPRPLGLEKS*ETMQFG
Trigger: ACCAAATTGCATCGTTTCCCAGGACTTCTCCAGGCC...TAAGGGCCTTGGAGCCATCTCTAAAACAAACCTCAAGGGATTTAGTGCCCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp TTAATAGGTGGACAAGAGAGAAGAAGATCTGTTTTCCGTGAACAATCTCCCAAAGGGTTTGGGGAGAGGTaGGAGGGGACGTGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: LIGGQERRRSVFREQSPKGFGER*EGTWLV
Trigger: GACAAGCCACGTCCCCTCCCACCTCTCCCCAAACCC...TTTGGGAGATTGTTCACGGAAAACAGATCTTCTTCTCTCTTGTCCACCTATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp AAGATTTACCTACATCCCCATCTGCACAAAGAGCTTGCTAACTCACTAACCCAATGGTTCCAGGGAGGGTaGACTGCAGGTTCAGATGGC +
Preference number: 4 (lower is better)
Translates to: KIYLHPHLHKELANSLTQWFQGG*TAGSDG
Trigger: GCCATCTGAACCTGCAGTCCACCCTCCCTGGAACCA...TTGGGTTAGTGAGTTAGCAAGCTCTTTGTGCAGATGGGGATGTAGGTAAATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp AAAAGAAAATTCACATTGCCCTGGATCCCAGACACATACAAACGCACAGTGGACCAGTTGGCGTTCCCATaGCTTTCTTGGGTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: KRKFTLPWIPDTYKRTVDQLAFP*LSWVSS
Trigger: GCTGGACACCCAAGAAAGCCATGGGAACGCCAACTG...GTCCACTGTGCGTTTGTATGTGTCTGGGATCCAGGGCAATGTGAATTTTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CCA 90 bp TTCCAGTTGGCGTTCCCATGGCTTTCTTGGGTGTCCAGCAGAGCTGTTATACACTTGGAAATGTGGGCTTaGATTCTACAGAACCTCTCC +
Preference number: 4 (lower is better)
Translates to: FQLAFPWLSWVSSRAVIHLEMWA*ILQNLS
Trigger: GGAGAGGTTCTGTAGAATCCAAGCCCACATTTCCAA...GTGTATAACAGCTCTGCTGGACACCCAAGAAAGCCATGGGAACGCCAACTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CCA 90 bp ATCATAGCCTCTGTACAAATGAGGAAACAGACTCAAGAGGGACTTGCTCAGGGTCCTGACTGCCAAGACTaGCAAACTGAGACTGTCAGC +
Preference number: 4 (lower is better)
Translates to: IIASVQMRKQTQEGLAQGPDCQD*QTETVS
Trigger: GCTGACAGTCTCAGTTTGCCAGTCTTGGCAGTCAGG...ACCCTGAGCAAGTCCCTCTTGAGTCTGTTTCCTCATTTGTACAGAGGCTATGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR TCA 90 bp TTCCAAACTAGTAAAACCAGCAACTTGGTCTTGATTCCTGGTTCTATTCTAATCCAGTGGCAGCTGCCATaGTGCACCCACCATCAGCCG +
Preference number: 4 (lower is better)
Translates to: FQTSKTSNLVLIPGSILIQWQLP*CTHHQP
Trigger: CGGCTGATGGTGGGTGCATCATGGCAGCTGCCACTG...GATTAGAATAGAACCAGGAATCAAGACCAAGTTGCTGGTTTTACTAGTTTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR TCA 90 bp AAAAGAAAATTCACATTGCCCTGGATCCCAGACACATACAAACGCACAGTGGACAGTAGTACATCAGCATaGGGACCGCCAGCACCAAGA +
Preference number: 4 (lower is better)
Translates to: KRKFTLPWIPDTYKRTVDSSTSA*GPPAPR
Trigger: TCTTGGTGCTGGCGGTCCTCATGCTGATGTACTACT...GTCCACTGTGCGTTTGTATGTGTCTGGGATCCAGGGCAATGTGAATTTTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR TCA 90 bp AAGATTTACCTACATCCCCATCTGCACAAAGAGCTTGCTAACTCACTAACCCAACTCTGGTCACACTCCTaGGAGCCAGTGAGGGAAATC +
Preference number: 4 (lower is better)
Translates to: KIYLHPHLHKELANSLTQLWSHS*EPVREI
Trigger: GATTTCCCTCACTGGCTCTCAGGAGTGTGACCAGAG...TTGGGTTAGTGAGTTAGCAAGCTCTTTGTGCAGATGGGGATGTAGGTAAATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR GCA 90 bp AAAAAGAAAATTCACATTGCCCTGGATCCCAGACACATACAAACGCACAGTGGAGAGGAAGAGGCTCCCTaGTCTGACTGTTCCAGTGCA +
Preference number: 4 (lower is better)
Translates to: KKKIHIALDPRHIQTHSGEEEAP*SDCSSA
Trigger: TGCACTGGAACAGTCAGAGCAGGGAGCCTCTTCCTC...TCCACTGTGCGTTTGTATGTGTCTGGGATCCAGGGCAATGTGAATTTTCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR GCA 90 bp GTTGGGGGTGACTTTGGAAATGTGGGCTTGGATTCTACAGAACCTCTCCTTCGCCCCCAGTTTTCAAATTaGAAGTCTTCCATACCCTCT +
Preference number: 4 (lower is better)
Translates to: VGGDFGNVGLDSTEPLLRPQFSN*KSSIPS
Trigger: AGAGGGTATGGAAGACTTGCAATTTGAAAACTGGGG...GCGAAGGAGAGGTTCTGTAGAATCCAAGCCCACATTTCCAAAGTCACCCCCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CCA 90 bp CCTTCAGTTTCAAAGAAGGAGGTGTTCCTGCACTGCCCCTCAAAGCAAATATGGCCAATTTCCGTGTGGTaGTTTGAGGGTTACCACTTG +
Preference number: 4 (lower is better)
Translates to: PSVSKKEVFLHCPSKQIWPISVW*FEGYHL
Trigger: CAAGTGGTAACCCTCAAACCACCACACGGAAATTGG...CCATATTTGCTTTGAGGGGCAGTGCAGGAACACCTCCTTCTTTGAAACTGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CCA 90 bp CCTGCTAAGGCAGCAGCACAGTCCATAGTTTTCTCAATGCCTCGTGGGAATACACAATCTGCAGAATCATaGGTCATGCCAAAGTTGTGG +
Preference number: 4 (lower is better)
Translates to: PAKAAAQSIVFSMPRGNTQSAES*VMPKLW
Trigger: CCACAACTTTGGCATGACCCATGATTCTGCAGATTG...TGTATTCCCACGAGGCATTGAGAAAACTATGGACTGTGCTGCTGCCTTAGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp GACCTTAAGATCTGCAAGTGTCTCAGAGCTGGGGCAGAAAAAGGCTTTACTTTTCTGCAGCTTGAAAGTTaGGTTGGCATGACCAGTCCC +
Preference number: 4 (lower is better)
Translates to: DLKICKCLRAGAEKGFTFLQLES*VGMTSP
Trigger: GGGACTGGTCATGCCAACCCAACTTTCAAGCTGCAG...AAAAGTAAAGCCTTTTTCTGCCCCAGCTCTGAGACACTTGCAGATCTTAAGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp CTTCTACTAATGCACTTCCTTGCTCTTCACAACAACCTGATGGGGCTGGTACTAGGCCTGGAGAAGTCCTaGGAAACGATGCAATTTGGT +
Preference number: 4 (lower is better)
Translates to: LLLMHFLALHNNLMGLVLGLEKS*ETMQFG
Trigger: ACCAAATTGCATCGTTTCCCAGGACTTCTCCAGGCC...TAGTACCAGCCCCATCAGGTTGTTGTGAAGAGCAAGGAAGTGCATTAGTAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp TTCCCATGGCTTTCTTGGGTGTCCAGCAGAGCTGTTATACACGTGGTTAACACAAAGGGAGAAGCCCCTTaGACAGGTCTAGATTTTCGA +
Preference number: 4 (lower is better)
Translates to: FPWLSWVSSRAVIHVVNTKGEAP*TGLDFR
Trigger: TCGAAAATCTAGACCTGTCCAAGGGGCTTCTCCCTT...TGTGTTAACCACGTGTATAACAGCTCTGCTGGACACCCAAGAAAGCCATGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp ACTTATTTCCAAACCCAAGAACATCCAAGAAGCACCTATTGTGTGCAGAGAACTAGGGTTCCATGGCCATaGGTCCTCTGCAGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: TYFQTQEHPRSTYCVQRTRVPWP*VLCSVQ
Trigger: CTGGACACTGCAGAGGACCCATGGCCATGGAACCCT...AGTTCTCTGCACACAATAGGTGCTTCTTGGATGTTCTTGGGTTTGGAAATAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp ACTTATTTCCAAACCCAAGAACATCCAAGAAGCACCTATTGTGTGCAGAGAACTAGGTGGGAGGGGACGTaGCTTGTCACATGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: TYFQTQEHPRSTYCVQRTRWEGT*LVTCSH
Trigger: ATGGCTGCATGTGACAAGCCACGTCCCCTCCCACCT...AGTTCTCTGCACACAATAGGTGCTTCTTGGATGTTCTTGGGTTTGGAAATAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp GAGGACGCGTTGGGGGTGACTTTGGAAATGTGGGCTTGGATTCTACAGAACCTCAAATTCACATTGCCCTaGATCCCAGACACATACAAA +
Preference number: 4 (lower is better)
Translates to: EDALGVTLEMWAWILQNLKFTLP*IPDTYK
Trigger: TTTGTATGTGTCTGGGATCCAGGGCAATGTGAATTT...GAGGTTCTGTAGAATCCAAGCCCACATTTCCAAAGTCACCCCCAACGCGTCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR TCA 90 bp CAATGCCTCGTGGGAATACAGCATGGTCAGCCAGCTTCTTCACCTCATCCCTTTTTGAGGGTTACCACTTaGAGTATAATGGGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: QCLVGIQHGQPASSPHPFLRVTT*SIMGFC
Trigger: ACAGAAACCCATTATACTTCAAGTGGTAACCCTCAA...AAAGGGATGAGGTGAAGAAGCTGGCTGACCATGCTGTATTCCCACGAGGCATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR TCA 90 bp ACTTATTTCCAAACCCAAGAACATCCAAGAAGCACCTATTGTGTGCAGAGAACTCCAGTCCCGCTGTTCTaGGAAACCCTGAAGGGACAA +
Preference number: 4 (lower is better)
Translates to: TYFQTQEHPRSTYCVQRTPVPLF*ETLKGQ
Trigger: TTGTCCCTTCAGGGTTTCTCAGAACAGCGGGACTGG...AGTTCTCTGCACACAATAGGTGCTTCTTGGATGTTCTTGGGTTTGGAAATAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR GCA 90 bp CTTCTACTAATGCACTTCCTTGCTCTTCACAACAACCTGATGGGGCTGGTACTACAGAATCATGGGTCATaGCAAAGTTGTGGCCCATCT +
Preference number: 4 (lower is better)
Translates to: LLLMHFLALHNNLMGLVLQNHGS*QSCGPS
Trigger: AGATGGGCCACAACTTTGGCATGACCCATGATTCTG...TAGTACCAGCCCCATCAGGTTGTTGTGAAGAGCAAGGAAGTGCATTAGTAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR GCA 90 bp AAGATTTACCTACATCCCCATCTGCACAAAGAGCTTGCTAACTCACTAACCCAAATTCCACCACCTGACTaGAGATACCTGTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: KIYLHPHLHKELANSLTQIPPPD*RYLSSS
Trigger: GGAGCTGGACAGGTATCTGCAGTCAGGTGGTGGAAT...TTGGGTTAGTGAGTTAGCAAGCTCTTTGTGCAGATGGGGATGTAGGTAAATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR GCA 90 bp TTAATAGGTGGACAAGAGAGAAGAAGATCTGTTTTCCGTGAACAATCTCCCAAATTCCAGTGCAGCTGCTaGTGGCTGCCTTCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: LIGGQERRRSVFREQSPKFQCSC*WLPSPV
Trigger: CACTGGAGAAGGCAGCCAGCAGCAGCTGCACTGGAA...TTTGGGAGATTGTTCACGGAAAACAGATCTTCTTCTCTCTTGTCCACCTATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR GCA 90 bp ACTTATTTCCAAACCCAAGAACATCCAAGAAGCACCTATTGTGTGCAGAGAACTGCAGACCCCCTCACCTaGTCAGAGCTCTCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: TYFQTQEHPRSTYCVQRTADPLT*SELSFC
Trigger: ACAGAAAGAGAGCTCTGAGCAGGTGAGGGGGTCTGC...AGTTCTCTGCACACAATAGGTGCTTCTTGGATGTTCTTGGGTTTGGAAATAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR GCA 90 bp TTCCCATGGCTTTCTTGGGTGTCCAGCAGAGCTGTTATACACGTGGTTAACACAGCAAACATCTCCAGGTaGTTTGCAAAAACCGTCCTA +
Preference number: 4 (lower is better)
Translates to: FPWLSWVSSRAVIHVVNTANISR*FAKTVL
Trigger: TAGGACGGTTTTTGCAAAGCACCTGGAGATGTTTGC...TGTGTTAACCACGTGTATAACAGCTCTGCTGGACACCCAAGAAAGCCATGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp AAAAGAAAATTCACATTGCCCTGGATCCCAGACACATACAAACGCACAGTGGACCCTCCAATTTCCGTGTaGTGGTTTGAGGGTTACCAC +
Preference number: 4 (lower is better)
Translates to: KRKFTLPWIPDTYKRTVDPPISV*WFEGYH
Trigger: GTGGTAACCCTCAAACCACCACACGGAAATTGGAGG...GTCCACTGTGCGTTTGTATGTGTCTGGGATCCAGGGCAATGTGAATTTTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp GAGGACGCGTTGGGGGTGACTTTGGAAATGTGGGCTTGGATTCTACAGAACCTCGCTCCACATACTTCATaGAGTTTAAATCTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: EDALGVTLEMWAWILQNLAPHTS*SLNLPF
Trigger: AAAGGGAAGATTTAAACTCCATGAAGTATGTGGAGC...GAGGTTCTGTAGAATCCAAGCCCACATTTCCAAAGTCACCCCCAACGCGTCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp CTGGTACTACTGCTCATCATAGCCTCTGTACAAATGAGGAAACAGACTCAAGAGAGGCAGTGGCAGTTCTaGTTGTTGTTACAGACCCCA +
Preference number: 4 (lower is better)
Translates to: LVLLLIIASVQMRKQTQERQWQF*LLLQTP
Trigger: TGGGGTCTGTAACAACAACCAGAACTGCCACTGCCT...CTCTTGAGTCTGTTTCCTCATTTGTACAGAGGCTATGATGAGCAGTAGTACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp AAAGTCTATCAAATTCCAAAACATTCCACCATCTTCCAGTTCACAGTACAACTTCTTCGCAGGCTCCCCTaGGGAAGGGGACCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: KVYQIPKHSTIFQFTVQLLRRLP*GRGPFQ
Trigger: CTGGAAAGGTCCCCTTCCCCAGGGGAGCCTGCGAAG...AAGTTGTACTGTGAACTGGAAGATGGTGGAATGTTTTGGAATTTGATAGACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp TTCACATTGCCCTGGATCCCAGACACATACAAACGCACAGTGGACGGTGTGAGAAAATTCACATTGCCCTaGATCCCAGACACATACAAA +
Preference number: 4 (lower is better)
Translates to: FTLPWIPDTYKRTVDGVRKFTLP*IPDTYK
Trigger: TTTGTATGTGTCTGGGATCCAGGGCAATGTGAATTT...TCTCACACCGTCCACTGTGCGTTTGTATGTGTCTGGGATCCAGGGCAATGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR TCA 90 bp AAAGTCTATCAAATTCCAAAACATTCCACCATCTTCCAGTTCACAGTACAACTTAGAGGCTCCCTGCTCTaGCTGTTCCAGTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: KVYQIPKHSTIFQFTVQLRGSLL*LFQCSC
Trigger: GCAGCTGCACTGGAACAGTCAGAGCAGGGAGCCTCT...AAGTTGTACTGTGAACTGGAAGATGGTGGAATGTTTTGGAATTTGATAGACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR TCA 90 bp CAATGCCTCGTGGGAATACAGCATGGTCAGCCAGCTTCTTCACCTCATCCCTTTAGACCACAAGAAGCATaGATTGCTTTGTTTTCTCAA +
Preference number: 4 (lower is better)
Translates to: QCLVGIQHGQPASSPHPFRPQEA*IALFSQ
Trigger: TTGAGAAAACAAAGCAATTCATGCTTCTTGTGGTCT...AAAGGGATGAGGTGAAGAAGCTGGCTGACCATGCTGTATTCCCACGAGGCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR GCA 90 bp AAGATTTACCTACATCCCCATCTGCACAAAGAGCTTGCTAACTCACTAACCCAAATGATAAGTTCATGCTaGAGCTTGGGGCTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: KIYLHPHLHKELANSLTQMISSC*SLGLPS
Trigger: GGAAGGCAGCCCCAAGCTGCAGCATGAACTTATCAT...TTGGGTTAGTGAGTTAGCAAGCTCTTTGTGCAGATGGGGATGTAGGTAAATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp ACTTATTTCCAAACCCAAGAACATCCAAGAAGCACCTATTGTGTGCAGAGAACTTTGACTCCTCCAGACTaGTACACAGAGCACATGGCC +
Preference number: 4 (lower is better)
Translates to: TYFQTQEHPRSTYCVQRTLTPPD*YTEHMA
Trigger: GGCCATGTGCTCTGTGTACCAGTCTGGAGGAGTCAA...AGTTCTCTGCACACAATAGGTGCTTCTTGGATGTTCTTGGGTTTGGAAATAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp AAGATTTACCTACATCCCCATCTGCACAAAGAGCTTGCTAACTCACTAACCCAACTCATGCAGTCACTATaGCTGTGGCGCTGTCATTTC +
Preference number: 4 (lower is better)
Translates to: KIYLHPHLHKELANSLTQLMQSL*LWRCHF
Trigger: GAAATGACAGCGCCACAGCCATAGTGACTGCATGAG...TTGGGTTAGTGAGTTAGCAAGCTCTTTGTGCAGATGGGGATGTAGGTAAATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp AGTCCCGCTGTTCTGAGAAACCCTGAAGGGACAACTGAACTGTTGCCTCAGCTTCTTGGTCTTGATTCCTaGTTCTATTCTAATCCTCAT +
Preference number: 4 (lower is better)
Translates to: SPAVLRNPEGTTELLPQLLGLDS*FYSNPH
Trigger: ATGAGGATTAGAATAGAACCAGGAATCAAGACCAAG...AAGCTGAGGCAACAGTTCAGTTGTCCCTTCAGGGTTTCTCAGAACAGCGGGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR TCA 90 bp AAAAAGAAAATTCACATTGCCCTGGATCCCAGACACATACAAACGCACAGTGGAGAACAGAGCCAGGAGTaGAGCATTAGTAGAACTGGT +
Preference number: 4 (lower is better)
Translates to: KKKIHIALDPRHIQTHSGEQSQE*SISRTG
Trigger: ACCAGTTCTACTAATGCTTCACTCCTGGCTCTGTTC...TCCACTGTGCGTTTGTATGTGTCTGGGATCCAGGGCAATGTGAATTTTCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR GCA 90 bp ACTTATTTCCAAACCCAAGAACATCCAAGAAGCACCTATTGTGTGCAGAGAACTGAGGTGTTCCTGCACTaGCCCTCAAAGCAAATATGG +
Preference number: 4 (lower is better)
Translates to: TYFQTQEHPRSTYCVQRTEVFLH*PSKQIW
Trigger: CCATATTTGCTTTGAGGGGCAGTGCAGGAACACCTC...AGTTCTCTGCACACAATAGGTGCTTCTTGGATGTTCTTGGGTTTGGAAATAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR GCA 90 bp TTAATAGGTGGACAAGAGAGAAGAAGATCTGTTTTCCGTGAACAATCTCCCAAAAATGGGTCTGTTCTCTaGTCAGAGGGCAACGGTCCA +
Preference number: 4 (lower is better)
Translates to: LIGGQERRRSVFREQSPKNGSVL*SEGNGP
Trigger: TGGACCGTTGCCCTCTGAGCAGAGAACAGACCCATT...TTTGGGAGATTGTTCACGGAAAACAGATCTTCTTCTCTCTTGTCCACCTATTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR GCA 90 bp AAAAGAAAATTCACATTGCCCTGGATCCCAGACACATACAAACGCACAGTGGACCCTTCCTCTCCCTTTTaGAATATTCCCTTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: KRKFTLPWIPDTYKRTVDPSSPF*NIPFPL
Trigger: AAGGGGAAAGGGAATATTGCAAAAGGGAGAGGAAGG...GTCCACTGTGCGTTTGTATGTGTCTGGGATCCAGGGCAATGTGAATTTTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp AGAAGGAGGTGTTCCTGCACTGCCCCTCAAAGCAAATATGGTTGTAGCCACACTGCTCCACATACTTCATaGAGTTTAAATCTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: RRRCSCTAPQSKYGCSHTAPHTS*SLNLPF
Trigger: AAAGGGAAGATTTAAACTCCATGAAGTATGTGGAGC...AGTGTGGCTACAACCATATTTGCTTTGAGGGGCAGTGCAGGAACACCTCCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CCA 90 bp CAAACTAGTAAAACCAGCAACTTGGTCTTGATTCCTGGTTCTATTCTAATCCTCTTGTCATGGTACTTCTaGGCAAGCAGCTTGCGCCTC +
Preference number: 4 (lower is better)
Translates to: QTSKTSNLVLIPGSILILLSWYF*ASSLRL
Trigger: GAGGCGCAAGCTGCTTGCCCAGAAGTACCATGACAA...GAGGATTAGAATAGAACCAGGAATCAAGACCAAGTTGCTGGTTTTACTAGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR GCA 90 bp CAAACTAGTAAAACCAGCAACTTGGTCTTGATTCCTGGTTCTATTCTAATCCTCGGACAACTGAACTGTTaGCTCAGCTTGGAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: QTSKTSNLVLIPGSILILGQLNC*LSLEGR
Trigger: TCTCCCTTCCAAGCTGAGGCAACAGTTCAGTTGTCC...GAGGATTAGAATAGAACCAGGAATCAAGACCAAGTTGCTGGTTTTACTAGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CCA 90 bp AAAGTCTATCAAATTCCAAAACATTCCACCATCTTCCAGTTCACAGTACAACTTGGCCACAGCAGTGGCTaGCTTGACCCTTCCTTAATC +
Preference number: 4 (lower is better)
Translates to: KVYQIPKHSTIFQFTVQLGHSSG*LDPSLI
Trigger: GATTAAGGAAGGGTCAAGCCAGCCACTGCTGTGGCC...AAGTTGTACTGTGAACTGGAAGATGGTGGAATGTTTTGGAATTTGATAGACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp GACAGGGCACTAAATCCCTTGAGGTTTGTTTTAGAGATGGCTCCAAGGCCCTTACACAGTACAACTTTATaGGATGGAGGTGATATGAAA +
Preference number: 4 (lower is better)
Translates to: DRALNPLRFVLEMAPRPLHSTTL*DGGDMK
Trigger: TTTCATATCACCTCCATCCCATAAAGTTGTACTGTG...TAAGGGCCTTGGAGCCATCTCTAAAACAAACCTCAAGGGATTTAGTGCCCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR GCA 90 bp AAAGTCTATCAAATTCCAAAACATTCCACCATCTTCCAGTTCACAGTACAACTTCTGTCTCCCTCACCGTaGCGTGGTAAAAGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: KVYQIPKHSTIFQFTVQLLSPSP*RGKSSD
Trigger: ATCACTGCTTTTACCACGGCACGGTGAGGGAGACAG...AAGTTGTACTGTGAACTGGAAGATGGTGGAATGTTTTGGAATTTGATAGACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR GCA 90 bp AAAGTCTATCAAATTCCAAAACATTCCACCATCTTCCAGTTCACAGTACAACTTCCCCGGCACTGGATCTaGCTCCCATTCATGATGATA +
Preference number: 4 (lower is better)
Translates to: KVYQIPKHSTIFQFTVQLPRHWI*LPFMMI
Trigger: TATCATCATGAATGGGAGGCAGATCCAGTGCCGGGG...AAGTTGTACTGTGAACTGGAAGATGGTGGAATGTTTTGGAATTTGATAGACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR GCA 90 bp CAAACTAGTAAAACCAGCAACTTGGTCTTGATTCCTGGTTCTATTCTAATCCTCGAAGGAGCAAAAAGTTaGTCATTCTTCTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: QTSKTSNLVLIPGSILILEGAKS*SFFSRS
Trigger: GGACCTGGAGAAGAATGAGCAACTTTTTGCTCCTTC...GAGGATTAGAATAGAACCAGGAATCAAGACCAAGTTGCTGGTTTTACTAGTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR GCA 90 bp TTAATAGGTGGACAAGAGAGAAGAAGATCTGTTTTCCGTGAACAATCTCCCAAAACCTACATCCCCATCTaGACAAAGAGCTTGCTAACT +
Preference number: 4 (lower is better)
Translates to: LIGGQERRRSVFREQSPKTYIPI*TKSLLT
Trigger: AGTTAGCAAGCTCTTTGTGCAGATGGGGATGTAGGT...TTTGGGAGATTGTTCACGGAAAACAGATCTTCTTCTCTCTTGTCCACCTATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CCA 90 bp CTGGTACTACTGCTCATCATAGCCTCTGTACAAATGAGGAAACAGACTCAAGAGGCTCCACATACTTCATaGAGTTTAAATCTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: LVLLLIIASVQMRKQTQEAPHTS*SLNLPF
Trigger: AAAGGGAAGATTTAAACTCCATGAAGTATGTGGAGC...CTCTTGAGTCTGTTTCCTCATTTGTACAGAGGCTATGATGAGCAGTAGTACCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CCA 90 bp ACTTATTTCCAAACCCAAGAACATCCAAGAAGCACCTATTGTGTGCAGAGAACTACTTCCAATAAAGATTaGAAAGGCGTATTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: TYFQTQEHPRSTYCVQRTTSNKD*KGVLQE
Trigger: CTCCTGCAATACGCCTTTCCAATCTTTATTGGAAGT...AGTTCTCTGCACACAATAGGTGCTTCTTGGATGTTCTTGGGTTTGGAAATAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
3UTR CAA 72 bp GAGCTGTTATACACGTGGTTAACACAATTACTGACTTaGGAACTGGTCCCCAGTTTTCAAATTGCAAGTCTT +
Preference number: 4 (lower is better)
Translates to: ELLYTWLTQLLT*ELVPSFQIASL
Trigger: AAGACTTGCAATTTGAAAACTGGGGACCAGTTCCAAAGTCAGTAATTGTGTTAACCACGTGTATAACAGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS CCA 90 bp CAAACGCCAGCAAGCAGAGCCGGGCGGCGCCTGCGCCCCCTGGCATaGTGGCGGCGGCCCTTAGCGCTCGGCGCTCACACGCCCTCAGCC +
Preference number: 5 (lower is better)
Translates to: QTPASRAGRRLRPLA*WRRPLALGAHTPSA
Trigger: GGCTGAGGGCGTGTGAGCGCCGAGCGCTAAGGGCCGCCGCCACCATGCCAGGGGGCGCAGGCGCCGCCCGGCTCTGCTTGCTGGCGTTTG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257527.9
ENST00000517905.1
ENST00000517951.5
ENST00000519752.1
CDS CCA 90 bp ACGCCAGCAAGCAGAGCCGGGCGGCGCCTGCGCCCCCTGGCATGGTaGCGGCGGCCCTTAGCGCTCGGCGCTCACACGCCCTCAGCCATA +
Preference number: 5 (lower is better)
Translates to: TPASRAGRRLRPLAW*RRPLALGAHTPSAI
Trigger: TATGGCTGAGGGCGTGTGAGCGCCGAGCGCTAAGGGCCGCCGCCACCATGCCAGGGGGCGCAGGCGCCGCCCGGCTCTGCTTGCTGGCGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257527.9
ENST00000517951.5
ENST00000519752.1
CDS GCA 90 bp AGCTTTCACCTTGAGGGCTTCCCGTGGACTCACCTTTGGGGCAAGTaGTGCCAGAGGCCGGGACTGCTGAGGGCCAGCACCAGGGGGCCG +
Preference number: 5 (lower is better)
Translates to: SFHLEGFPWTHLWGK*CQRPGLLRASTRGP
Trigger: CGGCCCCCTGGTGCTGGCCCTCAGCAGTCCCGGCCTCTGGCAGCACTTGCCCCAAAGGTGAGTCCACGGGAAGCCCTCAAGGTGAAAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CAA 90 bp TGTGGGCTTGGATTCTACAGAACCTCTCCTTCGCAGGCTCCCCTGGGGAAGGGGCCGTGGCCCGGTGTGTaGCAGAAGGGCGGGGCCCAG +
Preference number: 5 (lower is better)
Translates to: CGLGFYRTSPSQAPLGKGPWPGV*QKGGAQ
Trigger: CTGGGCCCCGCCCTTCTGCAACACACCGGGCCACGG...CCCCTTCCCCAGGGGAGCCTGCGAAGGAGAGGTTCTGTAGAATCCAAGCCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS CCA 90 bp GGGAGGCTCCTGCGGCCTGGCACTGGGTTTGCCGGGAGTGCCTTCTaGGGCGGCCGAGGCCTGGAGAAGTCCTGGGAAACGATGCAATTT +
Preference number: 5 (lower is better)
Translates to: GRLLRPGTGFAGSAF*GGRGLEKSWETMQF
Trigger: AAATTGCATCGTTTCCCAGGACTTCTCCAGGCCTCGGCCGCCCCAGAAGGCACTCCCGGCAAACCCAGTGCCAGGCCGCAGGAGCCTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257527.9
ENST00000517374.5
ENST00000517905.1
CDS CCA 90 bp CCCCTGGAGCCCTCTGGTACCAGCTTTCACCTTGAGGGCTTCCCGTaGACTCACCTTTGGGGCAAGTGCTGCCAGAGGCCGGGACTGCTG +
Preference number: 5 (lower is better)
Translates to: PLEPSGTSFHLEGFP*THLWGKCCQRPGLL
Trigger: CAGCAGTCCCGGCCTCTGGCAGCACTTGCCCCAAAGGTGAGTCCACGGGAAGCCCTCAAGGTGAAAGCTGGTACCAGAGGGCTCCAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CAA 90 bp GGGACCTTTCCAGTTGGCGTTCCCATGGCTTTCTTGGGTGTCCAGCAGAGCTGTCCGTGGCCCGGTGTGTaGCAGAAGGGCGGGGCCCAG +
Preference number: 5 (lower is better)
Translates to: GTFPVGVPMAFLGVQQSCPWPGV*QKGGAQ
Trigger: CTGGGCCCCGCCCTTCTGCAACACACCGGGCCACGG...ACAGCTCTGCTGGACACCCAAGAAAGCCATGGGAACGCCAACTGGAAAGGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CAA 90 bp CACATTCACCTTCTCGAAGCAGAGGTCAGGGGCAGGTCGGGCTCCGGGTCCCCACTCCGTCCTCTCTATTaGAGACCCGGGCCCTGGGGA +
Preference number: 5 (lower is better)
Translates to: HIHLLEAEVRGRSGSGSPLRPLY*RPGPWG
Trigger: TCCCCAGGGCCCGGGTCTCAAATAGAGAGGACGGAG...TGGGGACCCGGAGCCCGACCTGCCCCTGACCTCTGCTTCGAGAAGGTGAATGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CAA 90 bp TGTGGGCTTGGATTCTACAGAACCTCTCCTTCGCAGGCTCCCCTGGGGAAGGGGGGGGAATTGGCCGGCTaGGAGGAGGCCTCCTGGACG +
Preference number: 5 (lower is better)
Translates to: CGLGFYRTSPSQAPLGKGGELAG*EEASWT
Trigger: CGTCCAGGAGGCCTCCTCCAAGCCGGCCAATTCCCC...CCCCTTCCCCAGGGGAGCCTGCGAAGGAGAGGTTCTGTAGAATCCAAGCCCACA
64% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CAA 90 bp CACAGAAGAAGTACGAGGAGGGGCCAAGTGTACACAGCCTCCCGCAGGCCAGGTGGGGAATTGGCCGGCTaGGAGGAGGCCTCCTGGACG +
Preference number: 5 (lower is better)
Translates to: HRRSTRRGQVYTASRRPGGELAG*EEASWT
Trigger: CGTCCAGGAGGCCTCCTCCAAGCCGGCCAATTCCCC...ACCTGGCCTGCGGGAGGCTGTGTACACTTGGCCCCTCCTCGTACTTCTTCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CAA 90 bp CACAGAAGAAGTACGAGGAGGGGCCAAGTGTACACAGCCTCCCGCAGGCCAGGTGGCCTGGCACTGGGTTaGCCGGGAGTGCCTTCTGGG +
Preference number: 5 (lower is better)
Translates to: HRRSTRRGQVYTASRRPGGLALG*PGVPSG
Trigger: CCCAGAAGGCACTCCCGGCAAACCCAGTGCCAGGCC...ACCTGGCCTGCGGGAGGCTGTGTACACTTGGCCCCTCCTCGTACTTCTTCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS CCA 90 bp TCTGGTACCAGCTTTCACCTTGAGGGCTTCCCGTGGACTCACCTTTaGGGCAAGTGCTGCCAGAGGCCGGGACTGCTGAGGGCCAGCACC +
Preference number: 5 (lower is better)
Translates to: SGTSFHLEGFPWTHL*GKCCQRPGLLRAST
Trigger: GGTGCTGGCCCTCAGCAGTCCCGGCCTCTGGCAGCACTTGCCCCAAAGGTGAGTCCACGGGAAGCCCTCAAGGTGAAAGCTGGTACCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CAA 90 bp TGTGGGCTTGGATTCTACAGAACCTCTCCTTCGCAGGCTCCCCTGGGGAAGGGGGGGCAGTGGGGAGACTaGCCCGTACAGAACTCCGGG +
Preference number: 5 (lower is better)
Translates to: CGLGFYRTSPSQAPLGKGGQWGD*PVQNSG
Trigger: CCCGGAGTTCTGTACGGGCAAGTCTCCCCACTGCCC...CCCCTTCCCCAGGGGAGCCTGCGAAGGAGAGGTTCTGTAGAATCCAAGCCCACA
63% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CAA 90 bp TCGCTTGCCCTGGGGCGTCTGCAGCTTGAAAGTTGGGTTGGCATGACCAGTCCCGGGCAGTGGGGAGACTaGCCCGTACAGAACTCCGGG +
Preference number: 5 (lower is better)
Translates to: SLALGRLQLESWVGMTSPGQWGD*PVQNSG
Trigger: CCCGGAGTTCTGTACGGGCAAGTCTCCCCACTGCCC...GGGACTGGTCATGCCAACCCAACTTTCAAGCTGCAGACGCCCCAGGGCAAGCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CAA 90 bp AAGGGGTGCCCAGTGGCAGCTGCCATGATGCACCCACCATCAGCCGCACTGGCCCAGACCCCATGGCCATaGCACTTCTTCCCACAGCCT +
Preference number: 5 (lower is better)
Translates to: KGCPVAAAMMHPPSAALAQTPWP*HFFPQP
Trigger: AGGCTGTGGGAAGAAGTGCAATGGCCATGGGGTCTG...GGCCAGTGCGGCTGATGGTGGGTGCATCATGGCAGCTGCCACTGGGCACCCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CAA 90 bp CTCGCGGCACAGGGTCCCAGGAGCCAACAGCTTACACTGGTGGCAGCAGGAGCCGCGATCTCTATGAGCTaGTGTTTGGTGGCGTCCTGG +
Preference number: 5 (lower is better)
Translates to: LAAQGPRSQQLTLVAAGAAISMS*CLVASW
Trigger: CCAGGACGCCACCAAACACAAGCTCATAGAGATCGC...GGCTCCTGCTGCCACCAGTGTAAGCTGTTGGCTCCTGGGACCCTGTGCCGCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CAA 90 bp CACATTGCCCTGGATCCCAGACACATACAAACGCACAGTGGACGGTGTGAGAGGTCAATGGGCACCGCGTaGGACTCCAGGGGCCGGGCC +
Preference number: 5 (lower is better)
Translates to: HIALDPRHIQTHSGRCERSMGTA*DSRGRA
Trigger: GGCCCGGCCCCTGGAGTCCAACGCGGTGCCCATTGA...CCTCTCACACCGTCCACTGTGCGTTTGTATGTGTCTGGGATCCAGGGCAATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CAA 90 bp CGTGGGAATACAGCATGGTCAGCCAGCTTCTTCACCTCATCCCTTTCTGACCTGCCGTGGCCCGGTGTGTaGCAGAAGGGCGGGGCCCAG +
Preference number: 5 (lower is better)
Translates to: RGNTAWSASFFTSSLSDLPWPGV*QKGGAQ
Trigger: CTGGGCCCCGCCCTTCTGCAACACACCGGGCCACGG...CAGGTCAGAAAGGGATGAGGTGAAGAAGCTGGCTGACCATGCTGTATTCCCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CAA 90 bp GGGACCTTTCCAGTTGGCGTTCCCATGGCTTTCTTGGGTGTCCAGCAGAGCTGTGGCCTGGCACTGGGTTaGCCGGGAGTGCCTTCTGGG +
Preference number: 5 (lower is better)
Translates to: GTFPVGVPMAFLGVQQSCGLALG*PGVPSG
Trigger: CCCAGAAGGCACTCCCGGCAAACCCAGTGCCAGGCC...ACAGCTCTGCTGGACACCCAAGAAAGCCATGGGAACGCCAACTGGAAAGGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CAA 90 bp CCCAGAAATGGGTCTGTTCTCTGCTCAGAGGGCAACGGTCCAGCCCGAAGTCAAGGGCAGTGGGGAGACTaGCCCGTACAGAACTCCGGG +
Preference number: 5 (lower is better)
Translates to: PRNGSVLCSEGNGPARSQGQWGD*PVQNSG
Trigger: CCCGGAGTTCTGTACGGGCAAGTCTCCCCACTGCCC...TTGACTTCGGGCTGGACCGTTGCCCTCTGAGCAGAGAACAGACCCATTTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CAA 90 bp AAGACTGGCAAACTGAGACTGTCAGCCACACAGAAGAAGTACGAGGAGGGGCCATCAATGGGCACCGCGTaGGACTCCAGGGGCCGGGCC +
Preference number: 5 (lower is better)
Translates to: KTGKLRLSATQKKYEEGPSMGTA*DSRGRA
Trigger: GGCCCGGCCCCTGGAGTCCAACGCGGTGCCCATTGA...TGGCCCCTCCTCGTACTTCTTCTGTGTGGCTGACAGTCTCAGTTTGCCAGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CAA 90 bp AGAAGTACGAGGAGGGGCCAAGTGTACACAGCCTCCCGCAGGCCAGGTGGCTTCCAGACCCCATGGCCATaGCACTTCTTCCCACAGCCT +
Preference number: 5 (lower is better)
Translates to: RSTRRGQVYTASRRPGGFQTPWP*HFFPQP
Trigger: AGGCTGTGGGAAGAAGTGCAATGGCCATGGGGTCTG...GAAGCCACCTGGCCTGCGGGAGGCTGTGTACACTTGGCCCCTCCTCGTACTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CAA 90 bp CTCGCGGCACAGGGTCCCAGGAGCCAACAGCTTACACTGGTGGCAGCAGGAGCCTGGCAGTTCTGGTTGTaGTTACAGACCCCATGGCCA +
Preference number: 5 (lower is better)
Translates to: LAAQGPRSQQLTLVAAGAWQFWL*LQTPWP
Trigger: TGGCCATGGGGTCTGTAACAACAACCAGAACTGCCA...GGCTCCTGCTGCCACCAGTGTAAGCTGTTGGCTCCTGGGACCCTGTGCCGCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CAA 90 bp TGCCGTTGTAGCAGTAGGCCTGGCCGCCCTCACAGGGGGTACCATCCATCTGGTTCGGAGTGGTCCATGTaGACTCCTCCAGACTGGTAC +
Preference number: 5 (lower is better)
Translates to: CRCSSRPGRPHRGYHPSGSEWSM*TPPDWY
Trigger: GTACCAGTCTGGAGGAGTCAACATGGACCACTCCGA...ACCAGATGGATGGTACCCCCTGTGAGGGCGGCCAGGCCTACTGCTACAACGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CAA 90 bp TTCCCACAGCCTTCAGTTTCAAAGAAGGAGGTGTTCCTGCACTGCCCCTCAAAGTCAATGGGCACCGCGTaGGACTCCAGGGGCCGGGCC +
Preference number: 5 (lower is better)
Translates to: FPQPSVSKKEVFLHCPSKSMGTA*DSRGRA
Trigger: GGCCCGGCCCCTGGAGTCCAACGCGGTGCCCATTGA...CTTTGAGGGGCAGTGCAGGAACACCTCCTTCTTTGAAACTGAAGGCTGTGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CAA 90 bp TGTGGGCTTGGATTCTACAGAACCTCTCCTTCGCAGGCTCCCCTGGGGAAGGGGCAGACCCCATGGCCATaGCACTTCTTCCCACAGCCT +
Preference number: 5 (lower is better)
Translates to: CGLGFYRTSPSQAPLGKGQTPWP*HFFPQP
Trigger: AGGCTGTGGGAAGAAGTGCAATGGCCATGGGGTCTG...CCCCTTCCCCAGGGGAGCCTGCGAAGGAGAGGTTCTGTAGAATCCAAGCCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CAA 90 bp GGGGGTGACTTTGGAAATGTGGGCTTGGATTCTACAGAACCTCTCCTTCGCAGGGGGGAATTGGCCGGCTaGGAGGAGGCCTCCTGGACG +
Preference number: 5 (lower is better)
Translates to: GGDFGNVGLDSTEPLLRRGELAG*EEASWT
Trigger: CGTCCAGGAGGCCTCCTCCAAGCCGGCCAATTCCCC...CCTGCGAAGGAGAGGTTCTGTAGAATCCAAGCCCACATTTCCAAAGTCACCCCC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CAA 90 bp GGGGTGACTTTGGAAATGTGGGCTTGGATTCTACAGAACCTCTCCTTCGCAGGCGGCCTGGCACTGGGTTaGCCGGGAGTGCCTTCTGGG +
Preference number: 5 (lower is better)
Translates to: GVTLEMWAWILQNLSFAGGLALG*PGVPSG
Trigger: CCCAGAAGGCACTCCCGGCAAACCCAGTGCCAGGCC...GCCTGCGAAGGAGAGGTTCTGTAGAATCCAAGCCCACATTTCCAAAGTCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CAA 90 bp ACCCCAGGAGTGAATGGATGGCTTCTGCAAGCGAAGTGCTGGCCTGAGGGGCTTAGGGGCTTGCTGGCCTaGAGCATCTCCATCAGCACC +
Preference number: 5 (lower is better)
Translates to: TPGVNGWLLQAKCWPEGLRGLLA*SISIST
Trigger: GGTGCTGATGGAGATGCTCAAGGCCAGCAAGCCCCT...AAGCCCCTCAGGCCAGCACTTCGCTTGCAGAAGCCATCCATTCACTCCTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CAA 90 bp TCCCAGAAATGGGTCTGTTCTCTGCTCAGAGGGCAACGGTCCAGCCCGAAGTCACAATGGGAAGCTCTCTaGCGTGCCCTGCACCCCAGG +
Preference number: 5 (lower is better)
Translates to: SQKWVCSLLRGQRSSPKSQWEAL*RALHPR
Trigger: CCTGGGGTGCAGGGCACGCAAGAGAGCTTCCCATTG...TGACTTCGGGCTGGACCGTTGCCCTCTGAGCAGAGAACAGACCCATTTCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CAA 90 bp GGGACCTTTCCAGTTGGCGTTCCCATGGCTTTCTTGGGTGTCCAGCAGAGCTGTCTTCCTCACTTCCTCTaGTCCATCCAGGCTCCCGCG +
Preference number: 5 (lower is better)
Translates to: GTFPVGVPMAFLGVQQSCLPHFL*SIQAPA
Trigger: CGCGGGAGCCTGGATGGACAAGAGGAAGTGAGGAAG...ACAGCTCTGCTGGACACCCAAGAAAGCCATGGGAACGCCAACTGGAAAGGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CAA 90 bp CCGGCACTGGATCTGCCTCCCATTCATGATGATAGTGGTGTCAATGGGCACCGCCTTCCTCACTTCCTCTaGTCCATCCAGGCTCCCGCG +
Preference number: 5 (lower is better)
Translates to: PALDLPPIHDDSGVNGHRLPHFL*SIQAPA
Trigger: CGCGGGAGCCTGGATGGACAAGAGGAAGTGAGGAAG...GCGGTGCCCATTGACACCACTATCATCATGAATGGGAGGCAGATCCAGTGCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CAA 90 bp GAGGGGCCAAGTGTACACAGCCTCCCGCAGGCCAGGTGGCTTCTACTAATGCACTTCTGGGCAAGCAGCTaGCGCCTCCAACTGAGAAAG +
Preference number: 5 (lower is better)
Translates to: EGPSVHSLPQARWLLLMHFWASS*RLQLRK
Trigger: CTTTCTCAGTTGGAGGCGCAAGCTGCTTGCCCAGAA...GTGCATTAGTAGAAGCCACCTGGCCTGCGGGAGGCTGTGTACACTTGGCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CAA 90 bp CTCGCGGCACAGGGTCCCAGGAGCCAACAGCTTACACTGGTGGCAGCAGGAGCCTTCGCATCTCTCATGTaGCACTTCCTGTGTTCACCA +
Preference number: 5 (lower is better)
Translates to: LAAQGPRSQQLTLVAAGAFASLM*HFLCSP
Trigger: TGGTGAACACAGGAAGTGCAACATGAGAGATGCGAA...GGCTCCTGCTGCCACCAGTGTAAGCTGTTGGCTCCTGGGACCCTGTGCCGCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CAA 90 bp CTCGCGGCACAGGGTCCCAGGAGCCAACAGCTTACACTGGTGGCAGCAGGAGCCTTGAGTTGGCCTAGTTaGTTGTTCTGTCTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: LAAQGPRSQQLTLVAAGALSWPS*LFCLQQ
Trigger: CTGCTGCAGACAGAACAACAAACTAGGCCAACTCAA...GGCTCCTGCTGCCACCAGTGTAAGCTGTTGGCTCCTGGGACCCTGTGCCGCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CAA 90 bp TGTGGGCTTGGATTCTACAGAACCTCTCCTTCGCAGGCTCCCCTGGGGAAGGGGGGGACAACTGAACTGTaGCCTCAGCTTGGAAGGGAG +
Preference number: 5 (lower is better)
Translates to: CGLGFYRTSPSQAPLGKGGTTEL*PQLGRE
Trigger: CTCCCTTCCAAGCTGAGGCAACAGTTCAGTTGTCCC...CCCCTTCCCCAGGGGAGCCTGCGAAGGAGAGGTTCTGTAGAATCCAAGCCCACA
59% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CAA 90 bp AGCCACACAGAAGAAGTACGAGGAGGGGCCAAGTGTACACAGCCTCCCGCAGGCGGGACAACTGAACTGTaGCCTCAGCTTGGAAGGGAG +
Preference number: 5 (lower is better)
Translates to: SHTEEVRGGAKCTQPPAGGTTEL*PQLGRE
Trigger: CTCCCTTCCAAGCTGAGGCAACAGTTCAGTTGTCCC...GCCTGCGGGAGGCTGTGTACACTTGGCCCCTCCTCGTACTTCTTCTGTGTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CAA 90 bp TTCCCACAGCCTTCAGTTTCAAAGAAGGAGGTGTTCCTGCACTGCCCCTCAAAGGGGGAATTGGCCGGCTaGGAGGAGGCCTCCTGGACG +
Preference number: 5 (lower is better)
Translates to: FPQPSVSKKEVFLHCPSKGELAG*EEASWT
Trigger: CGTCCAGGAGGCCTCCTCCAAGCCGGCCAATTCCCC...CTTTGAGGGGCAGTGCAGGAACACCTCCTTCTTTGAAACTGAAGGCTGTGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CAA 90 bp TGTACAAATGAGGAAACAGACTCAAGAGGGACTTGCTCAGGGTCCCTCCCCAGGTCCCTGGTGGTGGGCTaGGAGTGCTCGAACCCACAG +
Preference number: 5 (lower is better)
Translates to: CTNEETDSRGTCSGSLPRSLVVG*ECSNPQ
Trigger: CTGTGGGTTCGAGCACTCCAAGCCCACCACCAGGGA...CCTGGGGAGGGACCCTGAGCAAGTCCCTCTTGAGTCTGTTTCCTCATTTGTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CAA 90 bp GAGGGTGGACTGCAGGTTCAGATGGCTCATGCAGTCACTATGGCTGTGGCGCTGTTCTGGGCAAGCAGCTaGCGCCTCCAACTGAGAAAG +
Preference number: 5 (lower is better)
Translates to: EGGLQVQMAHAVTMAVALFWASS*RLQLRK
Trigger: CTTTCTCAGTTGGAGGCGCAAGCTGCTTGCCCAGAA...CAGCGCCACAGCCATAGTGACTGCATGAGCCATCTGAACCTGCAGTCCACCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CAA 90 bp CAGCATGAGGACCGCCAGCACCAAGATGGCCACCAACACTCCAGCTACCACAGGCATCCATTGAACACTTaGGGAAAGGGGTGCCCAGTG +
Preference number: 5 (lower is better)
Translates to: QHEDRQHQDGHQHSSYHRHPLNT*GKGCPV
Trigger: CACTGGGCACCCCTTTCCCAAAGTGTTCAATGGATG...CCTGTGGTAGCTGGAGTGTTGGTGGCCATCTTGGTGCTGGCGGTCCTCATGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CAA 90 bp TCTTCCCACACTTCGCATCTCTCATGTTGCACTTCCTGTGTTCACCATTCATGTCCGTGGCCCGGTGTGTaGCAGAAGGGCGGGGCCCAG +
Preference number: 5 (lower is better)
Translates to: SSHTSHLSCCTSCVHHSCPWPGV*QKGGAQ
Trigger: CTGGGCCCCGCCCTTCTGCAACACACCGGGCCACGG...ACATGAATGGTGAACACAGGAAGTGCAACATGAGAGATGCGAAGTGTGGGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CAA 90 bp CACAGAAGAAGTACGAGGAGGGGCCAAGTGTACACAGCCTCCCGCAGGCCAGGTAGGATTTCCGGAGTGTaGATCACCTTTCGCTTGCCC +
Preference number: 5 (lower is better)
Translates to: HRRSTRRGQVYTASRRPGRISGV*ITFRLP
Trigger: GGGCAAGCGAAAGGTGATCAACACTCCGGAAATCCT...ACCTGGCCTGCGGGAGGCTGTGTACACTTGGCCCCTCCTCGTACTTCTTCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CAA 90 bp GGGGACCTTTCCAGTTGGCGTTCCCATGGCTTTCTTGGGTGTCCAGCAGAGCTGTCTATGAGCTTGTGTTaGGTGGCGTCCTGGTCTCGT +
Preference number: 5 (lower is better)
Translates to: GDLSSWRSHGFLGCPAELSMSLC*VASWSR
Trigger: ACGAGACCAGGACGCCACCAAACACAAGCTCATAGA...CAGCTCTGCTGGACACCCAAGAAAGCCATGGGAACGCCAACTGGAAAGGTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CAA 90 bp GAGGAAACAGACTCAAGAGGGACTTGCTCAGGGTCCCTCCCCAGGTCAGGTGCATCTATGAGCTTGTGTTaGGTGGCGTCCTGGTCTCGT +
Preference number: 5 (lower is better)
Translates to: EETDSRGTCSGSLPRSGASMSLC*VASWSR
Trigger: ACGAGACCAGGACGCCACCAAACACAAGCTCATAGA...TGCACCTGACCTGGGGAGGGACCCTGAGCAAGTCCCTCTTGAGTCTGTTTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CAA 90 bp AGCCACACAGAAGAAGTACGAGGAGGGGCCAAGTGTACACAGCCTCCCGCAGGCTCCAGCTCCCTCCTGTaGCATCCATTGAACACTTTG +
Preference number: 5 (lower is better)
Translates to: SHTEEVRGGAKCTQPPAGSSSLL*HPLNTL
Trigger: CAAAGTGTTCAATGGATGCAACAGGAGGGAGCTGGA...GCCTGCGGGAGGCTGTGTACACTTGGCCCCTCCTCGTACTTCTTCTGTGTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CAA 90 bp CCTGCTAAGGCAGCAGCACAGTCCATAGTTTTCTCAATGCCTCGTGGGAATACAGGGCAGTGGGGAGACTaGCCCGTACAGAACTCCGGG +
Preference number: 5 (lower is better)
Translates to: PAKAAAQSIVFSMPRGNTGQWGD*PVQNSG
Trigger: CCCGGAGTTCTGTACGGGCAAGTCTCCCCACTGCCC...TGTATTCCCACGAGGCATTGAGAAAACTATGGACTGTGCTGCTGCCTTAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CAA 90 bp AAACGCACAGTGGACGGTGTGAGAGGACGCGTTGGGGGTGACTTTGGAAATGTGCAGACCCCATGGCCATaGCACTTCTTCCCACAGCCT +
Preference number: 5 (lower is better)
Translates to: KRTVDGVRGRVGGDFGNVQTPWP*HFFPQP
Trigger: AGGCTGTGGGAAGAAGTGCAATGGCCATGGGGTCTG...CACATTTCCAAAGTCACCCCCAACGCGTCCTCTCACACCGTCCACTGTGCGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CAA 90 bp CCTTGCTCTTCACAACAACCTGATGGGGCTGGTACTACTGCTCATCATAGCCTCCTCCGTCCTCTCTATTaGAGACCCGGGCCCTGGGGA +
Preference number: 5 (lower is better)
Translates to: PCSSQQPDGAGTTAHHSLLRPLY*RPGPWG
Trigger: TCCCCAGGGCCCGGGTCTCAAATAGAGAGGACGGAG...GAGGCTATGATGAGCAGTAGTACCAGCCCCATCAGGTTGTTGTGAAGAGCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CAA 90 bp GGGGACCTTTCCAGTTGGCGTTCCCATGGCTTTCTTGGGTGTCCAGCAGAGCTGGCGTTGGGGGTGACTTaGGAAATGTGGGCTTGGATT +
Preference number: 5 (lower is better)
Translates to: GDLSSWRSHGFLGCPAELALGVT*EMWAWI
Trigger: AATCCAAGCCCACATTTCCAAAGTCACCCCCAACGC...CAGCTCTGCTGGACACCCAAGAAAGCCATGGGAACGCCAACTGGAAAGGTCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CAA 90 bp TGCAGGGGCAGGACTGAAGCCACCACAGCTCAGGATTCTAAGAATCACCTTTCACCCGTGGACTCACCTTaGGGGCAAGTGCTGCCAGAG +
Preference number: 5 (lower is better)
Translates to: CRGRTEATTAQDSKNHLSPVDSP*GQVLPE
Trigger: CTCTGGCAGCACTTGCCCCAAAGGTGAGTCCACGGG...TGAAAGGTGATTCTTAGAATCCTGAGCTGTGGTGGCTTCAGTCCTGCCCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS TCA 90 bp TCCCTTTTCATCCTGCGAGGTCGCTTCTTGGTCTGTTGTGTAAACTaGAGAGCCCAGTCCCTGGTGGTGGGCTTGGAGTGCTCGAACCCA +
Preference number: 5 (lower is better)
Translates to: SLFILRGRFLVCCVN*RAQSLVVGLECSNP
Trigger: TGGGTTCGAGCACTCCAAGCCCACCACCAGGGACTGGGCTCTTCAGTTTACACAACAGACCAAGAAGCGACCTCGCAGGATGAAAAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257527.9
ENST00000517905.1
ENST00000517951.5
CDS-3UTR CAA 90 bp TCGCTTGCCCTGGGGCGTCTGCAGCTTGAAAGTTGGGTTGGCATGACCAGTCCCTCGCTTCTTGGTCTGTaGTGTAAACTGAAGAGCCCA +
Preference number: 5 (lower is better)
Translates to: SLALGRLQLESWVGMTSPSLLGL*CKLKSP
Trigger: TGGGCTCTTCAGTTTACACAACAGACCAAGAAGCGA...GGGACTGGTCATGCCAACCCAACTTTCAAGCTGCAGACGCCCCAGGGCAAGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CAA 90 bp GAGGAAACAGACTCAAGAGGGACTTGCTCAGGGTCCCTCCCCAGGTCAGGTGCACTCCTGTTGCATCCATaGAACACTTTGGGAAAGGGG +
Preference number: 5 (lower is better)
Translates to: EETDSRGTCSGSLPRSGALLLHP*NTLGKG
Trigger: CCCCTTTCCCAAAGTGTTCAATGGATGCAACAGGAG...TGCACCTGACCTGGGGAGGGACCCTGAGCAAGTCCCTCTTGAGTCTGTTTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CAA 90 bp GACCTTAAGATCTGCAAGTGTCTCAGAGCTGGGGCAGAAAAAGGCTTTACTTTTTCAATGGGCACCGCGTaGGACTCCAGGGGCCGGGCC +
Preference number: 5 (lower is better)
Translates to: DLKICKCLRAGAEKGFTFSMGTA*DSRGRA
Trigger: GGCCCGGCCCCTGGAGTCCAACGCGGTGCCCATTGA...AAAAGTAAAGCCTTTTTCTGCCCCAGCTCTGAGACACTTGCAGATCTTAAGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CAA 90 bp CCCAGAAATGGGTCTGTTCTCTGCTCAGAGGGCAACGGTCCAGCCCGAAGTCAATGGCAGTTCTGGTTGTaGTTACAGACCCCATGGCCA +
Preference number: 5 (lower is better)
Translates to: PRNGSVLCSEGNGPARSQWQFWL*LQTPWP
Trigger: TGGCCATGGGGTCTGTAACAACAACCAGAACTGCCA...TTGACTTCGGGCTGGACCGTTGCCCTCTGAGCAGAGAACAGACCCATTTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CAA 90 bp GACTGCAGGTTCAGATGGCTCATGCAGTCACTATGGCTGTGGCGCTGTCATTTCAACTGTTGCCTCAGCTaGGAAGGGAGAGCTGAGGGC +
Preference number: 5 (lower is better)
Translates to: DCRFRWLMQSLWLWRCHFNCCLS*EGRAEG
Trigger: GCCCTCAGCTCTCCCTTCCAAGCTGAGGCAACAGTT...GAAATGACAGCGCCACAGCCATAGTGACTGCATGAGCCATCTGAACCTGCAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CAA 90 bp GCAGGGGCAGGACTGAAGCCACCACAGCTCAGGATTCTAAGAATCACCTTTCACAACTGTTGCCTCAGCTaGGAAGGGAGAGCTGAGGGC +
Preference number: 5 (lower is better)
Translates to: AGAGLKPPQLRILRITFHNCCLS*EGRAEG
Trigger: GCCCTCAGCTCTCCCTTCCAAGCTGAGGCAACAGTT...GTGAAAGGTGATTCTTAGAATCCTGAGCTGTGGTGGCTTCAGTCCTGCCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CAA 90 bp ACGGTCCAGCCCGAAGTCAATGACCAGCCTGCTCCCTCGTGTGTACTTTGTAAACAGGAGTCGCAACCTTaGGCATCACGGCTCAGAGGA +
Preference number: 5 (lower is better)
Translates to: TVQPEVNDQPAPSCVLCKQESQP*ASRLRG
Trigger: TCCTCTGAGCCGTGATGCCAAAGGTTGCGACTCCTG...TTTACAAAGTACACACGAGGGAGCAGGCTGGTCATTGACTTCGGGCTGGACCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CAA 90 bp GACACATACAAACGCACAGTGGACGGTGTGAGAGGACGCGTTGGGGGTGACTTTTCCAGGAACCAAGCCTaGAGGCAGAGGGTAGCACAT +
Preference number: 5 (lower is better)
Translates to: DTYKRTVDGVRGRVGGDFSRNQA*RQRVAH
Trigger: ATGTGCTACCCTCTGCCTCAAGGCTTGGTTCCTGGA...AAAGTCACCCCCAACGCGTCCTCTCACACCGTCCACTGTGCGTTTGTATGTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS CCA 90 bp GTCCTCTGCAGTGTCCAGAGAGCTCAAGGAAAGGGAGAAGCCCCTTaGACAGGTCTAGATTTTCGAGCTAATCATCCCTCCAGCCCTCTG +
Preference number: 5 (lower is better)
Translates to: VLCSVQRAQGKGEAP*TGLDFRANHPSSPL
Trigger: CAGAGGGCTGGAGGGATGATTAGCTCGAAAATCTAGACCTGTCCAAGGGGCTTCTCCCTTTCCTTGAGCTCTCTGGACACTGCAGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CAA 90 bp ATAGCCTCTGTACAAATGAGGAAACAGACTCAAGAGGGACTTGCTCAGGGTCCCCTTCCTCACTTCCTCTaGTCCATCCAGGCTCCCGCG +
Preference number: 5 (lower is better)
Translates to: IASVQMRKQTQEGLAQGPLPHFL*SIQAPA
Trigger: CGCGGGAGCCTGGATGGACAAGAGGAAGTGAGGAAG...GGGACCCTGAGCAAGTCCCTCTTGAGTCTGTTTCCTCATTTGTACAGAGGCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CAA 90 bp GGGGACCTTTCCAGTTGGCGTTCCCATGGCTTTCTTGGGTGTCCAGCAGAGCTGGGAAGGAGCAAAAAGTaGCTCATTCTTCTCCAGGTC +
Preference number: 5 (lower is better)
Translates to: GDLSSWRSHGFLGCPAELGRSKK*LILLQV
Trigger: GACCTGGAGAAGAATGAGCAACTTTTTGCTCCTTCC...CAGCTCTGCTGGACACCCAAGAAAGCCATGGGAACGCCAACTGGAAAGGTCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CAA 90 bp CCGGCACTGGATCTGCCTCCCATTCATGATGATAGTGGTGTCAATGGGCACCGCTCTGTAAATAAGGTGTaGGCCCTTGCTGTCAGGGAG +
Preference number: 5 (lower is better)
Translates to: PALDLPPIHDDSGVNGHRSVNKV*ALAVRE
Trigger: CTCCCTGACAGCAAGGGCCAACACCTTATTTACAGA...GCGGTGCCCATTGACACCACTATCATCATGAATGGGAGGCAGATCCAGTGCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CAA 90 bp ACCATCCATCTGGTAGAAGTTGGTAGGGCAGTGGGGAGACTTGCCCGTACAGAATTCTGGGCAAGCAGCTaGCGCCTCCAACTGAGAAAG +
Preference number: 5 (lower is better)
Translates to: TIHLVEVGRAVGRLARTEFWASS*RLQLRK
Trigger: CTTTCTCAGTTGGAGGCGCAAGCTGCTTGCCCAGAA...TTCTGTACGGGCAAGTCTCCCCACTGCCCTACCAACTTCTACCAGATGGATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CAA 90 bp TGTACAAATGAGGAAACAGACTCAAGAGGGACTTGCTCAGGGTCCCTCCCCAGGTCGGAGTGGTCCATGTaGACTCCTCCAGACTGGTAC +
Preference number: 5 (lower is better)
Translates to: CTNEETDSRGTCSGSLPRSEWSM*TPPDWY
Trigger: GTACCAGTCTGGAGGAGTCAACATGGACCACTCCGA...CCTGGGGAGGGACCCTGAGCAAGTCCCTCTTGAGTCTGTTTCCTCATTTGTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CAA 90 bp CCCTTCCCTGCTAAGGCAGCAGCACAGTCCATAGTTTTCTCAATGCCTCGTGGGCATCCATTGAACACTTaGGGAAAGGGGTGCCCAGTG +
Preference number: 5 (lower is better)
Translates to: PFPAKAAAQSIVFSMPRGHPLNT*GKGCPV
Trigger: CACTGGGCACCCCTTTCCCAAAGTGTTCAATGGATG...CCCACGAGGCATTGAGAAAACTATGGACTGTGCTGCTGCCTTAGCAGGGAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CAA 90 bp TGTCAGCCACACAGAAGAAGTACGAGGAGGGGCCAAGTGTACACAGCCTCCCGCTTGAGTTGGCCTAGTTaGTTGTTCTGTCTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: CQPHRRSTRRGQVYTASRLSWPS*LFCLQQ
Trigger: CTGCTGCAGACAGAACAACAAACTAGGCCAACTCAA...GCGGGAGGCTGTGTACACTTGGCCCCTCCTCGTACTTCTTCTGTGTGGCTGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CAA 90 bp TTCACATTGCCCTGGATCCCAGACACATACAAACGCACAGTGGACGGTGTGAGAAACTGTTGCCTCAGCTaGGAAGGGAGAGCTGAGGGC +
Preference number: 5 (lower is better)
Translates to: FTLPWIPDTYKRTVDGVRNCCLS*EGRAEG
Trigger: GCCCTCAGCTCTCCCTTCCAAGCTGAGGCAACAGTT...TCTCACACCGTCCACTGTGCGTTTGTATGTGTCTGGGATCCAGGGCAATGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CAA 90 bp AGTCCCGCTGTTCTGAGAAACCCTGAAGGGACAACTGAACTGTTGCCTCAGCTTAACTGTTGCCTCAGCTaGGAAGGGAGAGCTGAGGGC +
Preference number: 5 (lower is better)
Translates to: SPAVLRNPEGTTELLPQLNCCLS*EGRAEG
Trigger: GCCCTCAGCTCTCCCTTCCAAGCTGAGGCAACAGTT...AAGCTGAGGCAACAGTTCAGTTGTCCCTTCAGGGTTTCTCAGAACAGCGGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CAA 90 bp TTCCCATGGCTTTCTTGGGTGTCCAGCAGAGCTGTTATACACGTGGTTAACACACTCCGTCCTCTCTATTaGAGACCCGGGCCCTGGGGA +
Preference number: 5 (lower is better)
Translates to: FPWLSWVSSRAVIHVVNTLRPLY*RPGPWG
Trigger: TCCCCAGGGCCCGGGTCTCAAATAGAGAGGACGGAG...TGTGTTAACCACGTGTATAACAGCTCTGCTGGACACCCAAGAAAGCCATGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CAA 90 bp GAGGGTGGACTGCAGGTTCAGATGGCTCATGCAGTCACTATGGCTGTGGCGCTGTCAACAGGGAGATTTTaGGAGATGTGGAGGTTCCTG +
Preference number: 5 (lower is better)
Translates to: EGGLQVQMAHAVTMAVALSTGRF*EMWRFL
Trigger: CAGGAACCTCCACATCTCCAAAAATCTCCCTGTTGA...CAGCGCCACAGCCATAGTGACTGCATGAGCCATCTGAACCTGCAGTCCACCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CAA 90 bp AAACGCACAGTGGACGGTGTGAGAGGACGCGTTGGGGGTGACTTTGGAAATGTGTCTGTAAATAAGGTGTaGGCCCTTGCTGTCAGGGAG +
Preference number: 5 (lower is better)
Translates to: KRTVDGVRGRVGGDFGNVSVNKV*ALAVRE
Trigger: CTCCCTGACAGCAAGGGCCAACACCTTATTTACAGA...CACATTTCCAAAGTCACCCCCAACGCGTCCTCTCACACCGTCCACTGTGCGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CAA 90 bp CTGGGCAAGCAGCTTGCGCCTCCAACTGAGAAAGGACCAGAGGGTAGAATATGGTCCAGCTCCCTCCTGTaGCATCCATTGAACACTTTG +
Preference number: 5 (lower is better)
Translates to: LGKQLAPPTEKGPEGRIWSSSLL*HPLNTL
Trigger: CAAAGTGTTCAATGGATGCAACAGGAGGGAGCTGGA...CCATATTCTACCCTCTGGTCCTTTCTCAGTTGGAGGCGCAAGCTGCTTGCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CAA 90 bp CTTTGGAAATGTGGGCTTGGATTCTACAGAACCTCTCCTTCGCAGGCTCCCCTGTGGCAGTTCTGGTTGTaGTTACAGACCCCATGGCCA +
Preference number: 5 (lower is better)
Translates to: LWKCGLGFYRTSPSQAPLWQFWL*LQTPWP
Trigger: TGGCCATGGGGTCTGTAACAACAACCAGAACTGCCA...CAGGGGAGCCTGCGAAGGAGAGGTTCTGTAGAATCCAAGCCCACATTTCCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CAA 90 bp CTCCCGCAGGCCAGGTGGCTTCTACTAATGCACTTCCTTGCTCTTCACAACAACTGGCAGTTCTGGTTGTaGTTACAGACCCCATGGCCA +
Preference number: 5 (lower is better)
Translates to: LPQARWLLLMHFLALHNNWQFWL*LQTPWP
Trigger: TGGCCATGGGGTCTGTAACAACAACCAGAACTGCCA...GTTGTTGTGAAGAGCAAGGAAGTGCATTAGTAGAAGCCACCTGGCCTGCGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CAA 90 bp GGGACCTTTCCAGTTGGCGTTCCCATGGCTTTCTTGGGTGTCCAGCAGAGCTGTTTGAGTTGGCCTAGTTaGTTGTTCTGTCTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: GTFPVGVPMAFLGVQQSCLSWPS*LFCLQQ
Trigger: CTGCTGCAGACAGAACAACAAACTAGGCCAACTCAA...ACAGCTCTGCTGGACACCCAAGAAAGCCATGGGAACGCCAACTGGAAAGGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CAA 90 bp GTTGGGGGTGACTTTGGAAATGTGGGCTTGGATTCTACAGAACCTCTCCTTCGCGGGACAACTGAACTGTaGCCTCAGCTTGGAAGGGAG +
Preference number: 5 (lower is better)
Translates to: VGGDFGNVGLDSTEPLLRGTTEL*PQLGRE
Trigger: CTCCCTTCCAAGCTGAGGCAACAGTTCAGTTGTCCC...GCGAAGGAGAGGTTCTGTAGAATCCAAGCCCACATTTCCAAAGTCACCCCCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CAA 90 bp GACTGCAGGTTCAGATGGCTCATGCAGTCACTATGGCTGTGGCGCTGTCATTTCAGGATTTCCGGAGTGTaGATCACCTTTCGCTTGCCC +
Preference number: 5 (lower is better)
Translates to: DCRFRWLMQSLWLWRCHFRISGV*ITFRLP
Trigger: GGGCAAGCGAAAGGTGATCAACACTCCGGAAATCCT...GAAATGACAGCGCCACAGCCATAGTGACTGCATGAGCCATCTGAACCTGCAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CAA 90 bp TTCCAGTTGGCGTTCCCATGGCTTTCTTGGGTGTCCAGCAGAGCTGTTATACACAGCCACCCAGCACCTTaGTGGAGTGGGAGTCTATCT +
Preference number: 5 (lower is better)
Translates to: FQLAFPWLSWVSSRAVIHSHPAP*WSGSLS
Trigger: AGATAGACTCCCACTCCACAAAGGTGCTGGGTGGCT...GTGTATAACAGCTCTGCTGGACACCCAAGAAAGCCATGGGAACGCCAACTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CAA 90 bp GACTGCAGGTTCAGATGGCTCATGCAGTCACTATGGCTGTGGCGCTGTCATTTCGCGTTGGGGGTGACTTaGGAAATGTGGGCTTGGATT +
Preference number: 5 (lower is better)
Translates to: DCRFRWLMQSLWLWRCHFALGVT*EMWAWI
Trigger: AATCCAAGCCCACATTTCCAAAGTCACCCCCAACGC...GAAATGACAGCGCCACAGCCATAGTGACTGCATGAGCCATCTGAACCTGCAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS TCA 90 bp GCGCCTCCAACTGAGAAAGGACCAGAGGGTAGAATATGGATTCTCTaGAACTTCACACATGTTCCCGTGGGTCCACACTTCCAAGCCCAC +
Preference number: 5 (lower is better)
Translates to: APPTEKGPEGRIWIL*NFTHVPVGPHFQAH
Trigger: GTGGGCTTGGAAGTGTGGACCCACGGGAACATGTGTGAAGTTTCAGAGAATCCATATTCTACCCTCTGGTCCTTTCTCAGTTGGAGGCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257527.9
ENST00000517905.1
ENST00000517951.5
CDS-3UTR CAA 90 bp AGCCACACAGAAGAAGTACGAGGAGGGGCCAAGTGTACACAGCCTCCCGCAGGCTTTGAGGGTTACCACTaGAAGTATAATGGGTTTCTG +
Preference number: 5 (lower is better)
Translates to: SHTEEVRGGAKCTQPPAGFEGYH*KYNGFL
Trigger: CAGAAACCCATTATACTTCAAGTGGTAACCCTCAAA...GCCTGCGGGAGGCTGTGTACACTTGGCCCCTCCTCGTACTTCTTCTGTGTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CAA 90 bp CAGCATGAGGACCGCCAGCACCAAGATGGCCACCAACACTCCAGCTACCACAGGTTTGAGGGTTACCACTaGAAGTATAATGGGTTTCTG +
Preference number: 5 (lower is better)
Translates to: QHEDRQHQDGHQHSSYHRFEGYH*KYNGFL
Trigger: CAGAAACCCATTATACTTCAAGTGGTAACCCTCAAA...CCTGTGGTAGCTGGAGTGTTGGTGGCCATCTTGGTGCTGGCGGTCCTCATGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CAA 90 bp TGTACAAATGAGGAAACAGACTCAAGAGGGACTTGCTCAGGGTCCCTCCCCAGGTCTGTAAATAAGGTGTaGGCCCTTGCTGTCAGGGAG +
Preference number: 5 (lower is better)
Translates to: CTNEETDSRGTCSGSLPRSVNKV*ALAVRE
Trigger: CTCCCTGACAGCAAGGGCCAACACCTTATTTACAGA...CCTGGGGAGGGACCCTGAGCAAGTCCCTCTTGAGTCTGTTTCCTCATTTGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CAA 90 bp GACCTTAAGATCTGCAAGTGTCTCAGAGCTGGGGCAGAAAAAGGCTTTACTTTTTCCCTGGTGGTGGGCTaGGAGTGCTCGAACCCACAG +
Preference number: 5 (lower is better)
Translates to: DLKICKCLRAGAEKGFTFSLVVG*ECSNPQ
Trigger: CTGTGGGTTCGAGCACTCCAAGCCCACCACCAGGGA...AAAAGTAAAGCCTTTTTCTGCCCCAGCTCTGAGACACTTGCAGATCTTAAGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CAA 90 bp ATAGCCTCTGTACAAATGAGGAAACAGACTCAAGAGGGACTTGCTCAGGGTCCCGCGATCTCTATGAGCTaGTGTTTGGTGGCGTCCTGG +
Preference number: 5 (lower is better)
Translates to: IASVQMRKQTQEGLAQGPAISMS*CLVASW
Trigger: CCAGGACGCCACCAAACACAAGCTCATAGAGATCGC...GGGACCCTGAGCAAGTCCCTCTTGAGTCTGTTTCCTCATTTGTACAGAGGCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CAA 90 bp TTTCAAGAGCAAACAATTGCTCATGGCAGGATGGGAGGAGGCCCCAGGAAAGCCCTCCTGTTGCATCCATaGAACACTTTGGGAAAGGGG +
Preference number: 5 (lower is better)
Translates to: FQEQTIAHGRMGGGPRKALLLHP*NTLGKG
Trigger: CCCCTTTCCCAAAGTGTTCAATGGATGCAACAGGAG...GGCTTTCCTGGGGCCTCCTCCCATCCTGCCATGAGCAATTGTTTGCTCTTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CAA 90 bp CACATTGCCCTGGATCCCAGACACATACAAACGCACAGTGGACGGTGTGAGAGGGCATGGGGTTGGGTTTaGAGGATGTTGCTTGTTTGT +
Preference number: 5 (lower is better)
Translates to: HIALDPRHIQTHSGRCERAWGWV*RMLLVC
Trigger: ACAAACAAGCAACATCCTCAAAACCCAACCCCATGC...CCTCTCACACCGTCCACTGTGCGTTTGTATGTGTCTGGGATCCAGGGCAATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CAA 90 bp GAAAATTCACATTGCCCTGGATCCCAGACACATACAAACGCACAGTGGACGGTGGTTCCCATGGCTTTCTaGGGTGTCCAGCAGAGCTGT +
Preference number: 5 (lower is better)
Translates to: ENSHCPGSQTHTNAQWTVVPMAF*GVQQSC
Trigger: ACAGCTCTGCTGGACACCCAAGAAAGCCATGGGAAC...CACCGTCCACTGTGCGTTTGTATGTGTCTGGGATCCAGGGCAATGTGAATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CAA 90 bp TTTCCAGTTGGCGTTCCCATGGCTTTCTTGGGTGTCCAGCAGAGCTGTTATACAGTTCCCATGGCTTTCTaGGGTGTCCAGCAGAGCTGT +
Preference number: 5 (lower is better)
Translates to: FPVGVPMAFLGVQQSCYTVPMAF*GVQQSC
Trigger: ACAGCTCTGCTGGACACCCAAGAAAGCCATGGGAAC...TGTATAACAGCTCTGCTGGACACCCAAGAAAGCCATGGGAACGCCAACTGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CAA 90 bp TTTCCAGTTGGCGTTCCCATGGCTTTCTTGGGTGTCCAGCAGAGCTGTTATACAAGGGGACCTTTCCAGTaGGCGTTCCCATGGCTTTCT +
Preference number: 5 (lower is better)
Translates to: FPVGVPMAFLGVQQSCYTRGPFQ*AFPWLS
Trigger: AGAAAGCCATGGGAACGCCAACTGGAAAGGTCCCCT...TGTATAACAGCTCTGCTGGACACCCAAGAAAGCCATGGGAACGCCAACTGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CAA 90 bp CAGAAGAAGTACGAGGAGGGGCCAAGTGTACACAGCCTCCCGCAGGCCAGGTGGCACAAGAAGCATGAATaGCTTTGTTTTCTCAACTCT +
Preference number: 5 (lower is better)
Translates to: QKKYEEGPSVHSLPQARWHKKHE*LCFLNS
Trigger: AGAGTTGAGAAAACAAAGCAATTCATGCTTCTTGTG...CCACCTGGCCTGCGGGAGGCTGTGTACACTTGGCCCCTCCTCGTACTTCTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CAA 90 bp CGTGGGAATACAGCATGGTCAGCCAGCTTCTTCACCTCATCCCTTTCTGACCTGTCGCTTCTTGGTCTGTaGTGTAAACTGAAGAGCCCA +
Preference number: 5 (lower is better)
Translates to: RGNTAWSASFFTSSLSDLSLLGL*CKLKSP
Trigger: TGGGCTCTTCAGTTTACACAACAGACCAAGAAGCGA...CAGGTCAGAAAGGGATGAGGTGAAGAAGCTGGCTGACCATGCTGTATTCCCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CAA 90 bp AAGACTGGCAAACTGAGACTGTCAGCCACACAGAAGAAGTACGAGGAGGGGCCAGTGATTAATTGGGCGTaGTCATGGTACTTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: KTGKLRLSATQKKYEEGPVINWA*SWYFWA
Trigger: TGCCCAGAAGTACCATGACAACGCCCAATTAATCAC...TGGCCCCTCCTCGTACTTCTTCTGTGTGGCTGACAGTCTCAGTTTGCCAGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CAA 90 bp TTCACATTGCCCTGGATCCCAGACACATACAAACGCACAGTGGACGGTGTGAGATCCAGCTCCCTCCTGTaGCATCCATTGAACACTTTG +
Preference number: 5 (lower is better)
Translates to: FTLPWIPDTYKRTVDGVRSSSLL*HPLNTL
Trigger: CAAAGTGTTCAATGGATGCAACAGGAGGGAGCTGGA...TCTCACACCGTCCACTGTGCGTTTGTATGTGTCTGGGATCCAGGGCAATGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CAA 90 bp GGGGGTGACTTTGGAAATGTGGGCTTGGATTCTACAGAACCTCTCCTTCGCAGGTTCGCATCTCTCATGTaGCACTTCCTGTGTTCACCA +
Preference number: 5 (lower is better)
Translates to: GGDFGNVGLDSTEPLLRRFASLM*HFLCSP
Trigger: TGGTGAACACAGGAAGTGCAACATGAGAGATGCGAA...CCTGCGAAGGAGAGGTTCTGTAGAATCCAAGCCCACATTTCCAAAGTCACCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CAA 90 bp CCCACACTTCGCATCTCTCATGTTGCACTTCCTGTGTTCACCATTCATGTCCTTGGGACAACTGAACTGTaGCCTCAGCTTGGAAGGGAG +
Preference number: 5 (lower is better)
Translates to: PTLRISHVALPVFTIHVLGTTEL*PQLGRE
Trigger: CTCCCTTCCAAGCTGAGGCAACAGTTCAGTTGTCCC...AAGGACATGAATGGTGAACACAGGAAGTGCAACATGAGAGATGCGAAGTGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CAA 90 bp TTTCCAGTTGGCGTTCCCATGGCTTTCTTGGGTGTCCAGCAGAGCTGTTATACAAGGATTTCCGGAGTGTaGATCACCTTTCGCTTGCCC +
Preference number: 5 (lower is better)
Translates to: FPVGVPMAFLGVQQSCYTRISGV*ITFRLP
Trigger: GGGCAAGCGAAAGGTGATCAACACTCCGGAAATCCT...TGTATAACAGCTCTGCTGGACACCCAAGAAAGCCATGGGAACGCCAACTGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CAA 90 bp TTCCCATGGCTTTCTTGGGTGTCCAGCAGAGCTGTTATACACGTGGTTAACACAAGGGGACCTTTCCAGTaGGCGTTCCCATGGCTTTCT +
Preference number: 5 (lower is better)
Translates to: FPWLSWVSSRAVIHVVNTRGPFQ*AFPWLS
Trigger: AGAAAGCCATGGGAACGCCAACTGGAAAGGTCCCCT...TGTGTTAACCACGTGTATAACAGCTCTGCTGGACACCCAAGAAAGCCATGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CAA 90 bp TCAGCCACACAGAAGAAGTACGAGGAGGGGCCAAGTGTACACAGCCTCCCGCAGAGAAACATGAATGTTTaGCCCTTGGCTTTTGTTCTG +
Preference number: 5 (lower is better)
Translates to: SATQKKYEEGPSVHSLPQRNMNV*PLAFVL
Trigger: CAGAACAAAAGCCAAGGGCAAAACATTCATGTTTCT...CTGCGGGAGGCTGTGTACACTTGGCCCCTCCTCGTACTTCTTCTGTGTGGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS CCA 90 bp CAGAGGGTAGAATATGGATTCTCTGAAACTTCACACATGTTCCCGTaGGTCCACACTTCCAAGCCCACGAGAGCAATCCGGATGTTCAAG +
Preference number: 5 (lower is better)
Translates to: QRVEYGFSETSHMFP*VHTSKPTRAIRMFK
Trigger: CTTGAACATCCGGATTGCTCTCGTGGGCTTGGAAGTGTGGACCCACGGGAACATGTGTGAAGTTTCAGAGAATCCATATTCTACCCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257527.9
ENST00000517905.1
ENST00000517951.5
CDS-3UTR CAA 90 bp CAATGCCTCGTGGGAATACAGCATGGTCAGCCAGCTTCTTCACCTCATCCCTTTGGAAGGAGCAAAAAGTaGCTCATTCTTCTCCAGGTC +
Preference number: 5 (lower is better)
Translates to: QCLVGIQHGQPASSPHPFGRSKK*LILLQV
Trigger: GACCTGGAGAAGAATGAGCAACTTTTTGCTCCTTCC...AAAGGGATGAGGTGAAGAAGCTGGCTGACCATGCTGTATTCCCACGAGGCATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CAA 90 bp TTCACATTGCCCTGGATCCCAGACACATACAAACGCACAGTGGACGGTGTGAGATCGCTTCTTGGTCTGTaGTGTAAACTGAAGAGCCCA +
Preference number: 5 (lower is better)
Translates to: FTLPWIPDTYKRTVDGVRSLLGL*CKLKSP
Trigger: TGGGCTCTTCAGTTTACACAACAGACCAAGAAGCGA...TCTCACACCGTCCACTGTGCGTTTGTATGTGTCTGGGATCCAGGGCAATGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CAA 90 bp CCTTCAGTTTCAAAGAAGGAGGTGTTCCTGCACTGCCCCTCAAAGCAAATATGGTCTATGAGCTTGTGTTaGGTGGCGTCCTGGTCTCGT +
Preference number: 5 (lower is better)
Translates to: PSVSKKEVFLHCPSKQIWSMSLC*VASWSR
Trigger: ACGAGACCAGGACGCCACCAAACACAAGCTCATAGA...CCATATTTGCTTTGAGGGGCAGTGCAGGAACACCTCCTTCTTTGAAACTGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CAA 90 bp CAGACCTTAAGATCTGCAAGTGTCTCAGAGCTGGGGCAGAAAAAGGCTTTACTTGCGATCTCTATGAGCTaGTGTTTGGTGGCGTCCTGG +
Preference number: 5 (lower is better)
Translates to: QTLRSASVSELGQKKALLAISMS*CLVASW
Trigger: CCAGGACGCCACCAAACACAAGCTCATAGAGATCGC...AAGTAAAGCCTTTTTCTGCCCCAGCTCTGAGACACTTGCAGATCTTAAGGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CAA 90 bp GACAGGGCACTAAATCCCTTGAGGTTTGTTTTAGAGATGGCTCCAAGGCCCTTACATCCATTGAACACTTaGGGAAAGGGGTGCCCAGTG +
Preference number: 5 (lower is better)
Translates to: DRALNPLRFVLEMAPRPLHPLNT*GKGCPV
Trigger: CACTGGGCACCCCTTTCCCAAAGTGTTCAATGGATG...TAAGGGCCTTGGAGCCATCTCTAAAACAAACCTCAAGGGATTTAGTGCCCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CAA 90 bp GACTGCAGGTTCAGATGGCTCATGCAGTCACTATGGCTGTGGCGCTGTCATTTCGTACAATTAGAGGCATaGCAGCAGGGGTTGTTACAT +
Preference number: 5 (lower is better)
Translates to: DCRFRWLMQSLWLWRCHFVQLEA*QQGLLH
Trigger: ATGTAACAACCCCTGCTGCAATGCCTCTAATTGTAC...GAAATGACAGCGCCACAGCCATAGTGACTGCATGAGCCATCTGAACCTGCAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CAA 90 bp TGTACAAATGAGGAAACAGACTCAAGAGGGACTTGCTCAGGGTCCCTCCCCAGGGTACAATTAGAGGCATaGCAGCAGGGGTTGTTACAT +
Preference number: 5 (lower is better)
Translates to: CTNEETDSRGTCSGSLPRVQLEA*QQGLLH
Trigger: ATGTAACAACCCCTGCTGCAATGCCTCTAATTGTAC...CCTGGGGAGGGACCCTGAGCAAGTCCCTCTTGAGTCTGTTTCCTCATTTGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CAA 90 bp TTCACATTGCCCTGGATCCCAGACACATACAAACGCACAGTGGACGGTGTGAGATTGAGTTGGCCTAGTTaGTTGTTCTGTCTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: FTLPWIPDTYKRTVDGVRLSWPS*LFCLQQ
Trigger: CTGCTGCAGACAGAACAACAAACTAGGCCAACTCAA...TCTCACACCGTCCACTGTGCGTTTGTATGTGTCTGGGATCCAGGGCAATGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CAA 90 bp CCCACACTTCGCATCTCTCATGTTGCACTTCCTGTGTTCACCATTCATGTCCTTAGGATTTCCGGAGTGTaGATCACCTTTCGCTTGCCC +
Preference number: 5 (lower is better)
Translates to: PTLRISHVALPVFTIHVLRISGV*ITFRLP
Trigger: GGGCAAGCGAAAGGTGATCAACACTCCGGAAATCCT...AAGGACATGAATGGTGAACACAGGAAGTGCAACATGAGAGATGCGAAGTGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CAA 90 bp TTTCCAGTTGGCGTTCCCATGGCTTTCTTGGGTGTCCAGCAGAGCTGTTATACATGTATTCTGGAAACTTaGGGGCAAGTGCTGCCAGAG +
Preference number: 5 (lower is better)
Translates to: FPVGVPMAFLGVQQSCYTCILET*GQVLPE
Trigger: CTCTGGCAGCACTTGCCCCAAAGTTTCCAGAATACA...TGTATAACAGCTCTGCTGGACACCCAAGAAAGCCATGGGAACGCCAACTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CAA 90 bp ACGGTCCAGCCCGAAGTCAATGACCAGCCTGCTCCCTCGTGTGTACTTTGTAAAACCTGGGGCTGTATATaGCACAAAACAACACCTAGA +
Preference number: 5 (lower is better)
Translates to: TVQPEVNDQPAPSCVLCKTWGCI*HKTTPR
Trigger: TCTAGGTGTTGTTTTGTGCAATATACAGCCCCAGGT...TTTACAAAGTACACACGAGGGAGCAGGCTGGTCATTGACTTCGGGCTGGACCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CAA 90 bp GACACATACAAACGCACAGTGGACGGTGTGAGAGGACGCGTTGGGGGTGACTTTAGGGCACTAAATCCCTaGAGGTTTGTTTTAGAGATG +
Preference number: 5 (lower is better)
Translates to: DTYKRTVDGVRGRVGGDFRALNP*RFVLEM
Trigger: CATCTCTAAAACAAACCTCAAGGGATTTAGTGCCCT...AAAGTCACCCCCAACGCGTCCTCTCACACCGTCCACTGTGCGTTTGTATGTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CAA 90 bp AAGATTTACCTACATCCCCATCTGCACAAAGAGCTTGCTAACTCACTAACCCAAGATTGGAAAGGCGTATaGCAGGAGGTGGGGAGGGGC +
Preference number: 5 (lower is better)
Translates to: KIYLHPHLHKELANSLTQDWKGV*QEVGRG
Trigger: GCCCCTCCCCACCTCCTGCAATACGCCTTTCCAATC...TTGGGTTAGTGAGTTAGCAAGCTCTTTGTGCAGATGGGGATGTAGGTAAATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CAA 90 bp ACACCTAGAGGCCATCAGATCATAGTCCCTCTGGGCTTCCAAGGAAGCCGAGGAACACAATTACTGACTTaGGAACTGGTCCCCAGTTTT +
Preference number: 5 (lower is better)
Translates to: TPRGHQIIVPLGFQGSRGTQLLT*ELVPSF
Trigger: AAAACTGGGGACCAGTTCCAAAGTCAGTAATTGTGT...TCCTCGGCTTCCTTGGAAGCCCAGAGGGACTATGATCTGATGGCCTCTAGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CAA 90 bp ACGGTCCAGCCCGAAGTCAATGACCAGCCTGCTCCCTCGTGTGTACTTTGTAAATTTGGAAATGTGGGCTaGGATTCTACAGAACCTCTC +
Preference number: 5 (lower is better)
Translates to: TVQPEVNDQPAPSCVLCKFGNVG*DSTEPL
Trigger: GAGAGGTTCTGTAGAATCCAAGCCCACATTTCCAAA...TTTACAAAGTACACACGAGGGAGCAGGCTGGTCATTGACTTCGGGCTGGACCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CAA 90 bp CTGGGCAAGCAGCTTGCGCCTCCAACTGAGAAAGGACCAGAGGGTAGAATATGGAGTAAAACCAGCAACTaGGTCTTGATTCCTGGTTCT +
Preference number: 5 (lower is better)
Translates to: LGKQLAPPTEKGPEGRIWSKTSN*VLIPGS
Trigger: AGAACCAGGAATCAAGACCAAGTTGCTGGTTTTACT...CCATATTCTACCCTCTGGTCCTTTCTCAGTTGGAGGCGCAAGCTGCTTGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CAA 90 bp AGAAGGAGGTGTTCCTGCACTGCCCCTCAAAGCAAATATGGTTGTAGCCACACTGTGATTAATTGGGCGTaGTCATGGTACTTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: RRRCSCTAPQSKYGCSHTVINWA*SWYFWA
Trigger: TGCCCAGAAGTACCATGACAACGCCCAATTAATCAC...AGTGTGGCTACAACCATATTTGCTTTGAGGGGCAGTGCAGGAACACCTCCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CAA 90 bp AGTCCCGCTGTTCTGAGAAACCCTGAAGGGACAACTGAACTGTTGCCTCAGCTTGTACAATTAGAGGCATaGCAGCAGGGGTTGTTACAT +
Preference number: 5 (lower is better)
Translates to: SPAVLRNPEGTTELLPQLVQLEA*QQGLLH
Trigger: ATGTAACAACCCCTGCTGCAATGCCTCTAATTGTAC...AAGCTGAGGCAACAGTTCAGTTGTCCCTTCAGGGTTTCTCAGAACAGCGGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CAA 90 bp ATAGCCTCTGTACAAATGAGGAAACAGACTCAAGAGGGACTTGCTCAGGGTCCCTTCGCATCTCTCATGTaGCACTTCCTGTGTTCACCA +
Preference number: 5 (lower is better)
Translates to: IASVQMRKQTQEGLAQGPFASLM*HFLCSP
Trigger: TGGTGAACACAGGAAGTGCAACATGAGAGATGCGAA...GGGACCCTGAGCAAGTCCCTCTTGAGTCTGTTTCCTCATTTGTACAGAGGCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS-3UTR CAA 90 bp TTAATAGGTGGACAAGAGAGAAGAAGATCTGTTTTCCGTGAACAATCTCCCAAACTCCGTCCTCTCTATTaGAGACCCGGGCCCTGGGGA +
Preference number: 5 (lower is better)
Translates to: LIGGQERRRSVFREQSPKLRPLY*RPGPWG
Trigger: TCCCCAGGGCCCGGGTCTCAAATAGAGAGGACGGAG...TTTGGGAGATTGTTCACGGAAAACAGATCTTCTTCTCTCTTGTCCACCTATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CAA 90 bp GGGGGTGACTTTGGAAATGTGGGCTTGGATTCTACAGAACCTCTCCTTCGCAGGTGGGTTTTGAGGATGTaGCTTGTTTGTTTTGCAGAG +
Preference number: 5 (lower is better)
Translates to: GGDFGNVGLDSTEPLLRRWVLRM*LVCFAE
Trigger: CTCTGCAAAACAAACAAGCAACATCCTCAAAACCCA...CCTGCGAAGGAGAGGTTCTGTAGAATCCAAGCCCACATTTCCAAAGTCACCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CAA 90 bp AAGTCAATGACCAGCCTGCTCCCTCGTGTGTACTTTGTAAATAGCTGGGCTCCCTCCCCAGTTTTCAAATaGCAAGTCTTCCATACCCTC +
Preference number: 5 (lower is better)
Translates to: KSMTSLLPRVYFVNSWAPSPVFK*QVFHTL
Trigger: GAGGGTATGGAAGACTTGCAATTTGAAAACTGGGGA...GGGAGCCCAGCTATTTACAAAGTACACACGAGGGAGCAGGCTGGTCATTGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CAA 90 bp AAAAGAAAATTCACATTGCCCTGGATCCCAGACACATACAAACGCACAGTGGACTCTTCCATACCCTCTTaGGGGCAAGTGCTGCCAGAG +
Preference number: 5 (lower is better)
Translates to: KRKFTLPWIPDTYKRTVDSSIPS*GQVLPE
Trigger: CTCTGGCAGCACTTGCCCCAAAGAGGGTATGGAAGA...GTCCACTGTGCGTTTGTATGTGTCTGGGATCCAGGGCAATGTGAATTTTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000517374.5
CDS-3UTR CAA 90 bp TTCCAAACTAGTAAAACCAGCAACTTGGTCTTGATTCCTGGTTCTATTCTAATCTCCCTGGTGGTGGGCTaGGAGTGCTCGAACCCACAG +
Preference number: 5 (lower is better)
Translates to: FQTSKTSNLVLIPGSILISLVVG*ECSNPQ
Trigger: CTGTGGGTTCGAGCACTCCAAGCCCACCACCAGGGA...GATTAGAATAGAACCAGGAATCAAGACCAAGTTGCTGGTTTTACTAGTTTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CAA 90 bp AAGATTTACCTACATCCCCATCTGCACAAAGAGCTTGCTAACTCACTAACCCAAAGGACTGCTGAGGGTTaGCTCACCAAAGCACCACAC +
Preference number: 5 (lower is better)
Translates to: KIYLHPHLHKELANSLTQRTAEG*LTKAPH
Trigger: GTGTGGTGCTTTGGTGAGCAAACCCTCAGCAGTCCT...TTGGGTTAGTGAGTTAGCAAGCTCTTTGTGCAGATGGGGATGTAGGTAAATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CAA 90 bp TTTCCAGTTGGCGTTCCCATGGCTTTCTTGGGTGTCCAGCAGAGCTGTTATACATCCCCAGTTTTCAAATaGCAAGTCTTCCATACCCTC +
Preference number: 5 (lower is better)
Translates to: FPVGVPMAFLGVQQSCYTSPVFK*QVFHTL
Trigger: GAGGGTATGGAAGACTTGCAATTTGAAAACTGGGGA...TGTATAACAGCTCTGCTGGACACCCAAGAAAGCCATGGGAACGCCAACTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CAA 90 bp GTTGGGGGTGACTTTGGAAATGTGGGCTTGGATTCTACAGAACCTCTCCTTCGCACACAATTACTGACTTaGGAACTGGTCCCCAGTTTT +
Preference number: 5 (lower is better)
Translates to: VGGDFGNVGLDSTEPLLRTQLLT*ELVPSF
Trigger: AAAACTGGGGACCAGTTCCAAAGTCAGTAATTGTGT...GCGAAGGAGAGGTTCTGTAGAATCCAAGCCCACATTTCCAAAGTCACCCCCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS TCA 90 bp TCGGTAAAACTGGTCTCACCTTATCAACATAGTTGGCGATCTCTATaGGCTTGTGTTTGGTGGCGTCCTGGTCTCGTCGATTCTTCTGAA +
Preference number: 5 (lower is better)
Translates to: SVKLVSPYQHSWRSL*ACVWWRPGLVDSSE
Trigger: TTCAGAAGAATCGACGAGACCAGGACGCCACCAAACACAAGCTCATAGAGATCGCCAACTATGTTGATAAGGTGAGACCAGTTTTACCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS-3UTR CAA 90 bp GAAAATTCACATTGCCCTGGATCCCAGACACATACAAACGCACAGTGGACGGTGTTTGAGGGTTACCACTaGAAGTATAATGGGTTTCTG +
Preference number: 5 (lower is better)
Translates to: ENSHCPGSQTHTNAQWTVFEGYH*KYNGFL
Trigger: CAGAAACCCATTATACTTCAAGTGGTAACCCTCAAA...CACCGTCCACTGTGCGTTTGTATGTGTCTGGGATCCAGGGCAATGTGAATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CAA 90 bp TTAATAGGTGGACAAGAGAGAAGAAGATCTGTTTTCCGTGAACAATCTCCCAAATCGGAGTGGTCCATGTaGACTCCTCCAGACTGGTAC +
Preference number: 5 (lower is better)
Translates to: LIGGQERRRSVFREQSPKSEWSM*TPPDWY
Trigger: GTACCAGTCTGGAGGAGTCAACATGGACCACTCCGA...TTTGGGAGATTGTTCACGGAAAACAGATCTTCTTCTCTCTTGTCCACCTATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CAA 90 bp AAGATTTACCTACATCCCCATCTGCACAAAGAGCTTGCTAACTCACTAACCCAAAAAGGGAGAAGCCCCTaGGACAGGTCTAGATTTTCG +
Preference number: 5 (lower is better)
Translates to: KIYLHPHLHKELANSLTQKGRSP*DRSRFS
Trigger: CGAAAATCTAGACCTGTCCAAGGGGCTTCTCCCTTT...TTGGGTTAGTGAGTTAGCAAGCTCTTTGTGCAGATGGGGATGTAGGTAAATCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS TCA 90 bp TGTTCAAGGATCGGTAAAACTTATCAACATAGTTGGCGATCTCTATaGGCTTGTGTTTGGTGGCGTCCTGGTCTCGTCGATTCTTCTGAA +
Preference number: 5 (lower is better)
Translates to: CSRIGKTYQHSWRSL*ACVWWRPGLVDSSE
Trigger: TTCAGAAGAATCGACGAGACCAGGACGCCACCAAACACAAGCTCATAGAGATCGCCAACTATGTTGATAAGTTTTACCGATCCTTGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517905.1
CDS-3UTR CAA 90 bp AAAAGAAAATTCACATTGCCCTGGATCCCAGACACATACAAACGCACAGTGGACTTTGGAAATGTGGGCTaGGATTCTACAGAACCTCTC +
Preference number: 5 (lower is better)
Translates to: KRKFTLPWIPDTYKRTVDFGNVG*DSTEPL
Trigger: GAGAGGTTCTGTAGAATCCAAGCCCACATTTCCAAA...GTCCACTGTGCGTTTGTATGTGTCTGGGATCCAGGGCAATGTGAATTTTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS CCA 90 bp GAAACTCTAAATAATCAGCCACGAGGTAAAGCTCCACATACTTCATaGAGTTTAAATCTTCCCTTTTCATCCTGCGAGGTCGCTTCTTGG +
Preference number: 5 (lower is better)
Translates to: ETLNNQPRGKAPHTS*SLNLPFSSCEVASW
Trigger: CCAAGAAGCGACCTCGCAGGATGAAAAGGGAAGATTTAAACTCCATGAAGTATGTGGAGCTTTACCTCGTGGCTGATTATTTAGAGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257527.9
ENST00000517905.1
ENST00000517951.5
CDS-3UTR CAA 90 bp AAAAAGAAAATTCACATTGCCCTGGATCCCAGACACATACAAACGCACAGTGGAGTACAATTAGAGGCATaGCAGCAGGGGTTGTTACAT +
Preference number: 5 (lower is better)
Translates to: KKKIHIALDPRHIQTHSGVQLEA*QQGLLH
Trigger: ATGTAACAACCCCTGCTGCAATGCCTCTAATTGTAC...TCCACTGTGCGTTTGTATGTGTCTGGGATCCAGGGCAATGTGAATTTTCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517374.5
CDS-3UTR CAA 90 bp ACTTATTTCCAAACCCAAGAACATCCAAGAAGCACCTATTGTGTGCAGAGAACTTTCAAGAGCAAACAATaGCTCATGGCAGGATGGGAG +
Preference number: 5 (lower is better)
Translates to: TYFQTQEHPRSTYCVQRTFKSKQ*LMAGWE
Trigger: CTCCCATCCTGCCATGAGCAATTGTTTGCTCTTGAA...AGTTCTCTGCACACAATAGGTGCTTCTTGGATGTTCTTGGGTTTGGAAATAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CAA 90 bp TTAATAGGTGGACAAGAGAGAAGAAGATCTGTTTTCCGTGAACAATCTCCCAAAGTGATTAATTGGGCGTaGTCATGGTACTTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: LIGGQERRRSVFREQSPKVINWA*SWYFWA
Trigger: TGCCCAGAAGTACCATGACAACGCCCAATTAATCAC...TTTGGGAGATTGTTCACGGAAAACAGATCTTCTTCTCTCTTGTCCACCTATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS-3UTR CAA 90 bp AAAGTCTATCAAATTCCAAAACATTCCACCATCTTCCAGTTCACAGTACAACTTACATCTCCAGGTGCTTaGCAAAAACCGTCCTATCTA +
Preference number: 5 (lower is better)
Translates to: KVYQIPKHSTIFQFTVQLTSPGA*QKPSYL
Trigger: TAGATAGGACGGTTTTTGCAAAGCACCTGGAGATGT...AAGTTGTACTGTGAACTGGAAGATGGTGGAATGTTTTGGAATTTGATAGACTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS CCA 72 bp GGATGCACCTCCTGGCCTGGGGAGGCTCCTGCGGCCTaGCACTGGGTTTGCCGGGAGTGCCTTCTGGGGCGG +
Preference number: 6 (lower is better)
Translates to: GCTSWPGEAPAA*HWVCRECLLGR
Trigger: CCGCCCCAGAAGGCACTCCCGGCAAACCCAGTGCCAGGCCGCAGGAGCCTCCCCAGGCCAGGAGGTGCATCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257527.9
ENST00000517374.5
ENST00000517905.1
CDS GCA 72 bp GAGGCTCCTGCGGCCTGGCACTGGGTTTGCCGGGAGTaGCTTCTGGGGCGGCCGAGGCCTGGAGAAGTCCTG +
Preference number: 6 (lower is better)
Translates to: EAPAAWHWVCRE*LLGRPRPGEVL
Trigger: CAGGACTTCTCCAGGCCTCGGCCGCCCCAGAAGGCACTCCCGGCAAACCCAGTGCCAGGCCGCAGGAGCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257527.9
ENST00000517374.5
ENST00000517905.1
CDS CCA 72 bp CTGCGGCCTGGCACTGGGTTTGCCGGGAGTGCCTTCTaGGGCGGCCGAGGCCTGGAGAAGTCCTGGGAAACG +
Preference number: 6 (lower is better)
Translates to: LRPGTGFAGSAF*GGRGLEKSWET
Trigger: CGTTTCCCAGGACTTCTCCAGGCCTCGGCCGCCCCAGAAGGCACTCCCGGCAAACCCAGTGCCAGGCCGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257527.9
ENST00000517374.5
ENST00000517905.1
CDS GCA 72 bp CTTGAGGGCTTCCCGTGGACTCACCTTTGGGGCAAGTaGTGCCAGAGGCCGGGACTGCTGAGGGCCAGCACC +
Preference number: 6 (lower is better)
Translates to: LEGFPWTHLWGK*CQRPGLLRAST
Trigger: GGTGCTGGCCCTCAGCAGTCCCGGCCTCTGGCAGCACTTGCCCCAAAGGTGAGTCCACGGGAAGCCCTCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS CCA 72 bp AGCTTTCACCTTGAGGGCTTCCCGTGGACTCACCTTTaGGGCAAGTGCTGCCAGAGGCCGGGACTGCTGAGG +
Preference number: 6 (lower is better)
Translates to: SFHLEGFPWTHL*GKCCQRPGLLR
Trigger: CCTCAGCAGTCCCGGCCTCTGGCAGCACTTGCCCCAAAGGTGAGTCCACGGGAAGCCCTCAAGGTGAAAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS CCA 72 bp CCCTCTGGTACCAGCTTTCACCTTGAGGGCTTCCCGTaGACTCACCTTTGGGGCAAGTGCTGCCAGAGGCCG +
Preference number: 6 (lower is better)
Translates to: PSGTSFHLEGFP*THLWGKCCQRP
Trigger: CGGCCTCTGGCAGCACTTGCCCCAAAGGTGAGTCCACGGGAAGCCCTCAAGGTGAAAGCTGGTACCAGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517905.1
CDS TCA 72 bp ATCCTGCGAGGTCGCTTCTTGGTCTGTTGTGTAAACTaGAGAGCCCAGTCCCTGGTGGTGGGCTTGGAGTGC +
Preference number: 6 (lower is better)
Translates to: ILRGRFLVCCVN*RAQSLVVGLEC
Trigger: GCACTCCAAGCCCACCACCAGGGACTGGGCTCTTCAGTTTACACAACAGACCAAGAAGCGACCTCGCAGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257527.9
ENST00000517905.1
ENST00000517951.5
CDS CAA 90 bp GTTTCCCGGGGGCGGCTTGAGATGTTCAGATCTGTAAATAAGGTGTaGGCCCTTGCTGTCAGGGAGGGGCTCGATGACGTAGCTGAGGTT +
Preference number: 6 (lower is better)
Translates to: VSRGRLEMFRSVNKV*ALAVREGLDDVAEV
Trigger: AACCTCAGCTACGTCATCGAGCCCCTCCCTGACAGCAAGGGCCAACACCTTATTTACAGATCTGAACATCTCAAGCCGCCCCCGGGAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000257527.9
ENST00000517905.1
ENST00000517951.5
CDS CAA 72 bp GGGCGGCTTGAGATGTTCAGATCTGTAAATAAGGTGTaGGCCCTTGCTGTCAGGGAGGGGCTCGATGACGTA +
Preference number: 6 (lower is better)
Translates to: GRLEMFRSVNKV*ALAVREGLDDV
Trigger: TACGTCATCGAGCCCCTCCCTGACAGCAAGGGCCAACACCTTATTTACAGATCTGAACATCTCAAGCCGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257527.9
ENST00000517905.1
ENST00000517951.5
CDS CCA 72 bp GAATATGGATTCTCTGAAACTTCACACATGTTCCCGTaGGTCCACACTTCCAAGCCCACGAGAGCAATCCGG +
Preference number: 6 (lower is better)
Translates to: EYGFSETSHMFP*VHTSKPTRAIR
Trigger: CCGGATTGCTCTCGTGGGCTTGGAAGTGTGGACCCACGGGAACATGTGTGAAGTTTCAGAGAATCCATATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257527.9
ENST00000517905.1
ENST00000517951.5
CDS CCA 72 bp AGTGTCCAGAGAGCTCAAGGAAAGGGAGAAGCCCCTTaGACAGGTCTAGATTTTCGAGCTAATCATCCCTCC +
Preference number: 6 (lower is better)
Translates to: SVQRAQGKGEAP*TGLDFRANHPS
Trigger: GGAGGGATGATTAGCTCGAAAATCTAGACCTGTCCAAGGGGCTTCTCCCTTTCCTTGAGCTCTCTGGACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257527.9
CDS TCA 72 bp CTGGTCTCACCTTATCAACATAGTTGGCGATCTCTATaGGCTTGTGTTTGGTGGCGTCCTGGTCTCGTCGAT +
Preference number: 6 (lower is better)
Translates to: LVSPYQHSWRSL*ACVWWRPGLVD
Trigger: ATCGACGAGACCAGGACGCCACCAAACACAAGCTCATAGAGATCGCCAACTATGTTGATAAGGTGAGACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517951.5
CDS TCA 72 bp GCCCAAACCTCAGTTGTCAACTCCTGCCAGTGTAAATaGGGTCTTTTGAGTCTTACCTTTTCTCTCACGGGG +
Preference number: 6 (lower is better)
Translates to: AQTSVVNSCQCK*GLLSLTFSLTG
Trigger: CCCCGTGAGAGAAAAGGTAAGACTCAAAAGACCTCATTTACACTGGCAGGAGTTGACAACTGAGGTTTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519752.1
CDS TCA 72 bp ACTGAGAAAGGACCAGAGGGTAGAATATGGATTCTCTaGAACTTCACACATGTTCCCGTGGGTCCACACTTC +
Preference number: 6 (lower is better)
Translates to: TEKGPEGRIWIL*NFTHVPVGPHF
Trigger: GAAGTGTGGACCCACGGGAACATGTGTGAAGTTTCAGAGAATCCATATTCTACCCTCTGGTCCTTTCTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257527.9
ENST00000517905.1
ENST00000517951.5
CDS TCA 72 bp AGCTTTGAGTGGATGCTTTTCTCTCACGGGGCTTTCTaGAGTCTTCCACTGAGGTATGATAAGTTCATGCTG +
Preference number: 6 (lower is better)
Translates to: SFEWMLFSHGAF*SLPLRYDKFML
Trigger: CAGCATGAACTTATCATACCTCAGTGGAAGACTTCAGAAAGCCCCGTGAGAGAAAAGCATCCACTCAAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257527.9
ENST00000517905.1
ENST00000517951.5
CDS TCA 72 bp ATCGGTAAAACTTATCAACATAGTTGGCGATCTCTATaGGCTTGTGTTTGGTGGCGTCCTGGTCTCGTCGAT +
Preference number: 6 (lower is better)
Translates to: IGKTYQHSWRSL*ACVWWRPGLVD
Trigger: ATCGACGAGACCAGGACGCCACCAAACACAAGCTCATAGAGATCGCCAACTATGTTGATAAGTTTTACCGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257527.9
ENST00000517905.1
CDS CCA 72 bp CGTGGTAAAAGCAGTGATCCTCCAATTTCCGTGTGGTaGTTTGAGGGTTACCACTTGAAGTATAATGGGTTT +
Preference number: 6 (lower is better)
Translates to: RGKSSDPPISVW*FEGYHLKYNGF
Trigger: AAACCCATTATACTTCAAGTGGTAACCCTCAAACCACCACACGGAAATTGGAGGATCACTGCTTTTACCACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257527.9
ENST00000517905.1
ENST00000517951.5
CDS CCA 72 bp AATAATCAGCCACGAGGTAAAGCTCCACATACTTCATaGAGTTTAAATCTTCCCTTTTCATCCTGCGAGGTC +
Preference number: 6 (lower is better)
Translates to: NNQPRGKAPHTS*SLNLPFSSCEV
Trigger: GACCTCGCAGGATGAAAAGGGAAGATTTAAACTCCATGAAGTATGTGGAGCTTTACCTCGTGGCTGATTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257527.9
ENST00000517905.1
ENST00000517951.5