RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADAM17 (Homo sapiens)

Ensembl gene IDs: ENSG00000151694

Ensembl transcript IDs: ENST00000310823.8, ENST00000478059.1, ENST00000618923.2, ENST00000647610.1, ENST00000647622.1, ENST00000647979.1, ENST00000648002.1, ENST00000648548.1, ENST00000648857.1, ENST00000649068.1, ENST00000649227.1, ENST00000649798.1, ENST00000649972.1, ENST00000650116.1, ENST00000650241.1

Found 837 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGCTGCTGGCGCCGAAGGGATCACAGGGGCAGGCTGCAGGCGGCCTaGAGTCTGGGGCGCAGGAAAGGGTTTGATAATGCGAACCGATGC +
Preference number: 1 (lower is better)
Translates to: SCWRRRDHRGRLQAA*SLGRRKGFDNANRC
Trigger: GCATCGGTTCGCATTATCAAACCCTTTCCTGCGCCCCAGACTCCAGGCCGCCTGCAGCCTGCCCCTGTGATCCCTTCGGCGCCAGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR GCA 90 bp GTCTTCCTGGATGGTGTCCATTCTCTGGTGGTCCAGTTTTGGAGCTaGTGGCGCCGAAGGGATCACAGGGGCAGGCTGCAGGCGGCCTGG +
Preference number: 1 (lower is better)
Translates to: VFLDGVHSLVVQFWS*WRRRDHRGRLQAAW
Trigger: CCAGGCCGCCTGCAGCCTGCCCCTGTGATCCCTTCGGCGCCAGCAGCTCCAAAACTGGACCACCAGAGAATGGACACCATCCAGGAAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR CCA 90 bp GGCGCCGAAGGGATCACAGGGGCAGGCTGCAGGCGGCCTGGAGTCTaGGGCGCAGGAAAGGGTTTGATAATGCGAACCGATGCAGAATCC +
Preference number: 1 (lower is better)
Translates to: GAEGITGAGCRRPGV*GAGKGLIMRTDAES
Trigger: GGATTCTGCATCGGTTCGCATTATCAAACCCTTTCCTGCGCCCCAGACTCCAGGCCGCCTGCAGCCTGCCCCTGTGATCCCTTCGGCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR CCA 90 bp TTCCTGGATGGTGTCCATTCTCTGGTGGTCCAGTTTTGGAGCTGCTaGCGCCGAAGGGATCACAGGGGCAGGCTGCAGGCGGCCTGGAGT +
Preference number: 1 (lower is better)
Translates to: FLDGVHSLVVQFWSC*RRRDHRGRLQAAWS
Trigger: ACTCCAGGCCGCCTGCAGCCTGCCCCTGTGATCCCTTCGGCGCCAGCAGCTCCAAAACTGGACCACCAGAGAATGGACACCATCCAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR GCA 90 bp CAGAGTTTCTGTGAGTCTCTCTGCCTGCCTGCCTGCCTGCCTGCCTaGAGAGAAGGCCCATTCTGGTCTCCTCTGCCACTGTGTGGTAAG +
Preference number: 1 (lower is better)
Translates to: QSFCESLCLPACLPA*REGPFWSPLPLCGK
Trigger: CTTACCACACAGTGGCAGAGGAGACCAGAATGGGCCTTCTCTGCAGGCAGGCAGGCAGGCAGGCAGGCAGAGAGACTCACAGAAACTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618923.2
3UTR CCA 90 bp ACCCATCCTCGTCCATATGTGAGTCTGTGCTGGGGTCTTCCTGGATaGTGTCCATTCTCTGGTGGTCCAGTTTTGGAGCTGCTGGCGCCG +
Preference number: 1 (lower is better)
Translates to: THPRPYVSLCWGLPG*CPFSGGPVLELLAP
Trigger: CGGCGCCAGCAGCTCCAAAACTGGACCACCAGAGAATGGACACCATCCAGGAAGACCCCAGCACAGACTCACATATGGACGAGGATGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR CCA 90 bp ATATGTGAGTCTGTGCTGGGGTCTTCCTGGATGGTGTCCATTCTCTaGTGGTCCAGTTTTGGAGCTGCTGGCGCCGAAGGGATCACAGGG +
Preference number: 1 (lower is better)
Translates to: ICESVLGSSWMVSIL*WSSFGAAGAEGITG
Trigger: CCCTGTGATCCCTTCGGCGCCAGCAGCTCCAAAACTGGACCACCAGAGAATGGACACCATCCAGGAAGACCCCAGCACAGACTCACATAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR GCA 90 bp GGAAGGGGTCCTTCTCAAACCCATCCTCGTCCATATGTGAGTCTGTaGTGGGGTCTTCCTGGATGGTGTCCATTCTCTGGTGGTCCAGTT +
Preference number: 1 (lower is better)
Translates to: GRGPSQTHPRPYVSL*WGLPGWCPFSGGPV
Trigger: AACTGGACCACCAGAGAATGGACACCATCCAGGAAGACCCCAGCACAGACTCACATATGGACGAGGATGGGTTTGAGAAGGACCCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR CCA 90 bp TCAAACCCATCCTCGTCCATATGTGAGTCTGTGCTGGGGTCTTCCTaGATGGTGTCCATTCTCTGGTGGTCCAGTTTTGGAGCTGCTGGC +
Preference number: 1 (lower is better)
Translates to: SNPSSSICESVLGSS*MVSILWWSSFGAAG
Trigger: GCCAGCAGCTCCAAAACTGGACCACCAGAGAATGGACACCATCCAGGAAGACCCCAGCACAGACTCACATATGGACGAGGATGGGTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR TCA 90 bp AAGTGTGAGATAAAGAAGGAAACCATGCTCAGCTCAGAGTTTCTGTaGGTCTCTCTGCCTGCCTGCCTGCCTGCCTGCCTGCAGAGAAGG +
Preference number: 1 (lower is better)
Translates to: KCEIKKETMLSSEFL*VSLPACLPACLQRR
Trigger: CCTTCTCTGCAGGCAGGCAGGCAGGCAGGCAGGCAGAGAGACTCACAGAAACTCTGAGCTGAGCATGGTTTCCTTCTTTATCTCACACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618923.2
3UTR TCA 90 bp GCTATTTGGGAAGGGGTCCTTCTCAAACCCATCCTCGTCCATATGTaGGTCTGTGCTGGGGTCTTCCTGGATGGTGTCCATTCTCTGGTG +
Preference number: 1 (lower is better)
Translates to: AIWEGVLLKPILVHM*VCAGVFLDGVHSLV
Trigger: CACCAGAGAATGGACACCATCCAGGAAGACCCCAGCACAGACTCACATATGGACGAGGATGGGTTTGAGAAGGACCCCTTCCCAAATAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR GCA 90 bp GCCTGGAGTCTGGGGCGCAGGAAAGGGTTTGATAATGCGAACCGATaGAGAATCCATGCTGCTCAGCATTTCGACGTTACTGGGGTGAAA +
Preference number: 1 (lower is better)
Translates to: AWSLGRRKGFDNANR*RIHAAQHFDVTGVK
Trigger: TTTCACCCCAGTAACGTCGAAATGCTGAGCAGCATGGATTCTGCATCGGTTCGCATTATCAAACCCTTTCCTGCGCCCCAGACTCCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR CCA 90 bp AGGGGTCCTTCTCAAACCCATCCTCGTCCATATGTGAGTCTGTGCTaGGGTCTTCCTGGATGGTGTCCATTCTCTGGTGGTCCAGTTTTG +
Preference number: 1 (lower is better)
Translates to: RGPSQTHPRPYVSLC*GLPGWCPFSGGPVL
Trigger: CAAAACTGGACCACCAGAGAATGGACACCATCCAGGAAGACCCCAGCACAGACTCACATATGGACGAGGATGGGTTTGAGAAGGACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR GCA 90 bp TTTGTTCAGCATCGACATAGGGCACACAGCGGCCAGAAAGGTCCCTaGAGCACACCTTGCAGGAGTTGTCAGTTTCATTACATGCACAGG +
Preference number: 1 (lower is better)
Translates to: FVQHRHRAHSGQKGP*STPCRSCQFHYMHR
Trigger: CCTGTGCATGTAATGAAACTGACAACTCCTGCAAGGTGTGCTGCAGGGACCTTTCTGGCCGCTGTGTGCCCTATGTCGATGCTGAACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR CCA 90 bp ACACTTGCCAAGATCCAAGCAAACAGTGTCATCTTCAGCATTTCCTaGAGGCGGGCACTCACTGCTATTACCTGTGCAGTAGGACACGCC +
Preference number: 1 (lower is better)
Translates to: TLAKIQANSVIFSIS*RRALTAITCAVGHA
Trigger: GGCGTGTCCTACTGCACAGGTAATAGCAGTGAGTGCCCGCCTCCAGGAAATGCTGAAGATGACACTGTTTGCTTGGATCTTGGCAAGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR TCA 90 bp AGCCTTTTCACTTCTGGTGACCGGATGGTCCGTGAGATCCTCAAATaGCTTGGCAGCTGTGCTGCTATTTGGGAAGGGGTCCTTCTCAAA +
Preference number: 1 (lower is better)
Translates to: SLFTSGDRMVREILK*LGSCAAIWEGVLLK
Trigger: TTTGAGAAGGACCCCTTCCCAAATAGCAGCACAGCTGCCAAGTCATTTGAGGATCTCACGGACCATCCGGTCACCAGAAGTGAAAAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR CCA 90 bp CGCTGCAGTTTAAAGGAGGCAGCCTTTTCACTTCTGGTGACCGGATaGTCCGTGAGATCCTCAAATGACTTGGCAGCTGTGCTGCTATTT +
Preference number: 1 (lower is better)
Translates to: RCSLKEAAFSLLVTG*SVRSSNDLAAVLLF
Trigger: AAATAGCAGCACAGCTGCCAAGTCATTTGAGGATCTCACGGACCATCCGGTCACCAGAAGTGAAAAGGCTGCCTCCTTTAAACTGCAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR GCA 90 bp TACATGCACAGGACTCCAGCTGCTGTTCCCTCTCGCAGAAAGGGATaGATTTCCCATCCTTACACTTGCCAAGATCCAAGCAAACAGTGT +
Preference number: 1 (lower is better)
Translates to: YMHRTPAAVPSRRKG*ISHPYTCQDPSKQC
Trigger: ACACTGTTTGCTTGGATCTTGGCAAGTGTAAGGATGGGAAATGCATCCCTTTCTGCGAGAGGGAACAGCAGCTGGAGTCCTGTGCATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR GCA 90 bp ACCTTGCAGGAGTTGTCAGTTTCATTACATGCACAGGACTCCAGCTaGTGTTCCCTCTCGCAGAAAGGGATGCATTTCCCATCCTTACAC +
Preference number: 1 (lower is better)
Translates to: TLQELSVSLHAQDSS*CSLSQKGMHFPSLH
Trigger: GTGTAAGGATGGGAAATGCATCCCTTTCTGCGAGAGGGAACAGCAGCTGGAGTCCTGTGCATGTAATGAAACTGACAACTCCTGCAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR GCA 90 bp ACCCTAGAGTCAGGCTCACCAACCACGTGTCCAGTGAAGAAGTCCTaGCATTTTACAGTGTACTCGCTTTCGTTTTTACCATCCACCACC +
Preference number: 1 (lower is better)
Translates to: TLESGSPTTCPVKKS*HFTVYSLSFLPSTT
Trigger: GGTGGTGGATGGTAAAAACGAAAGCGAGTACACTGTAAAATGGCAGGACTTCTTCACTGGACACGTGGTTGGTGAGCCTGACTCTAGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000649227.1
ENST00000650116.1
3UTR TCA 90 bp GTAGCATTAATCGCCTCCTGGCACTTCTTCTGGGCAGTCTCAAACTaGCAGTTTTTACAGCAAGGACTGTTCCTGTCACTGCACTGGACA +
Preference number: 1 (lower is better)
Translates to: VALIASWHFFWAVSN*QFLQQGLFLSLHWT
Trigger: TGTCCAGTGCAGTGACAGGAACAGTCCTTGCTGTAAAAACTGTCAGTTTGAGACTGCCCAGAAGAAGTGCCAGGAGGCGATTAATGCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR GCA 90 bp GCTGTTCCCTCTCGCAGAAAGGGATGCATTTCCCATCCTTACACTTaGCAAGATCCAAGCAAACAGTGTCATCTTCAGCATTTCCTGGAG +
Preference number: 1 (lower is better)
Translates to: AVPSRRKGCISHPYT*QDPSKQCHLQHFLE
Trigger: CTCCAGGAAATGCTGAAGATGACACTGTTTGCTTGGATCTTGGCAAGTGTAAGGATGGGAAATGCATCCCTTTCTGCGAGAGGGAACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR TCA 90 bp CTCTGCCACTGTGTGGTAAGTTTACTGGGGTGGACTCTGCAGTTTTaGTGGTGGCTGGTCAAGGTCAAATCTGGGATAGAACTACTTAGA +
Preference number: 1 (lower is better)
Translates to: LCHCVVSLLGWTLQF*WWLVKVKSGIELLR
Trigger: TCTAAGTAGTTCTATCCCAGATTTGACCTTGACCAGCCACCATCAAAACTGCAGAGTCCACCCCAGTAAACTTACCACACAGTGGCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618923.2
3UTR TCA 90 bp ACATCTTATTGTTCTCGTGATCGCCACTCACAGCTATGGGATACATaGCATATTTCCCTCCCTGGTCCTCATTCGGGGCACATTCTGCTA +
Preference number: 1 (lower is better)
Translates to: TSYCSRDRHSQLWDT*HISLPGPHSGHILL
Trigger: TAGCAGAATGTGCCCCGAATGAGGACCAGGGAGGGAAATATGTCATGTATCCCATAGCTGTGAGTGGCGATCACGAGAACAATAAGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR CCA 90 bp GCCCCATCTGTGTTGATTCTGATTATAACATCATCATCTCTTATGTaGGCTAGAACCCTAGAGTCAGGCTCACCAACCACGTGTCCAGTG +
Preference number: 1 (lower is better)
Translates to: APSVLILIITSSSLM*ARTLESGSPTTCPV
Trigger: CACTGGACACGTGGTTGGTGAGCCTGACTCTAGGGTTCTAGCCCACATAAGAGATGATGATGTTATAATCAGAATCAACACAGATGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649227.1
ENST00000650116.1
3UTR GCA 90 bp CACACTCTTCTCCTTCATCCACCCTCGAGTTCCCACAAACTTTATTaGTGCGTTCTTGAAAACACTCCTGGGCCTTACTTTCAATGGTCT +
Preference number: 1 (lower is better)
Translates to: HTLLLHPPSSSHKLY*CVLENTPGPYFQWS
Trigger: AGACCATTGAAAGTAAGGCCCAGGAGTGTTTTCAAGAACGCAGCAATAAAGTTTGTGGGAACTCGAGGGTGGATGAAGGAGAAGAGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR TCA 90 bp CTGGTCAAGGTCAAATCTGGGATAGAACTACTTAGAAGCCCACCATaGTACACATCTAAACCACACCCTCCAATCCATCCTTCATCAGAT +
Preference number: 1 (lower is better)
Translates to: LVKVKSGIELLRSPP*YTSKPHPPIHPSSD
Trigger: ATCTGATGAAGGATGGATTGGAGGGTGTGGTTTAGATGTGTATCATGGTGGGCTTCTAAGTAGTTCTATCCCAGATTTGACCTTGACCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618923.2
3UTR GCA 90 bp ACTCTTCTCCTTCATCCACCCTCGAGTTCCCACAAACTTTATTGCTaGGTTCTTGAAAACACTCCTGGGCCTTACTTTCAATGGTCTTAT +
Preference number: 1 (lower is better)
Translates to: TLLLHPPSSSHKLYC*VLENTPGPYFQWSY
Trigger: ATAAGACCATTGAAAGTAAGGCCCAGGAGTGTTTTCAAGAACGCAGCAATAAAGTTTGTGGGAACTCGAGGGTGGATGAAGGAGAAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR TCA 90 bp CACGTGTTCTTCATGGGATCTGGGTCAGCTCTTCTTTTCACTCGATaGACAAGCTCTAATATGAATTTGTATGCACTTCAGGTGGTTCTC +
Preference number: 1 (lower is better)
Translates to: HVFFMGSGSALLFTR*TSSNMNLYALQVVL
Trigger: GAGAACCACCTGAAGTGCATACAAATTCATATTAGAGCTTGTTCATCGAGTGAAAAGAAGAGCTGACCCAGATCCCATGAAGAACACGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647610.1
ENST00000650116.1
3UTR CCA 90 bp AGAAGCGATGATCTGCTACCACCAATAATTTACACGTGTTCTTCATaGGATCTGGGTCAGCTCTTCTTTTCACTCGATGAACAAGCTCTT +
Preference number: 1 (lower is better)
Translates to: RSDDLLPPIIYTCSS*DLGQLFFSLDEQAL
Trigger: AAGAGCTTGTTCATCGAGTGAAAAGAAGAGCTGACCCAGATCCCATGAAGAACACGTGTAAATTATTGGTGGTAGCAGATCATCGCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647979.1
ENST00000649227.1
3UTR CCA 90 bp GGCTATAATAAGCCTTTGGACAAACACCTCCATGGCTGTTTGCTCTaGGAGAGCCAACATAAGCTAATCCAAGAGTTCCCATATCAAAAT +
Preference number: 1 (lower is better)
Translates to: GYNKPLDKHLHGCLL*ESQHKLIQEFPYQN
Trigger: ATTTTGATATGGGAACTCTTGGATTAGCTTATGTTGGCTCTCCCAGAGCAAACAGCCATGGAGGTGTTTGTCCAAAGGCTTATTATAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR CCA 90 bp AGAAGCGATGATCTGCTACCACCAATAATTTACACGTGTTCTTCATaGGATCTGGGTCAGCTCTTCTTTTCACTCGATGAACAAGCTCTA +
Preference number: 1 (lower is better)
Translates to: RSDDLLPPIIYTCSS*DLGQLFFSLDEQAL
Trigger: TAGAGCTTGTTCATCGAGTGAAAAGAAGAGCTGACCCAGATCCCATGAAGAACACGTGTAAATTATTGGTGGTAGCAGATCATCGCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647610.1
ENST00000650116.1
3UTR TCA 90 bp AGACCATCCGGATCATGTTCTGCTCCAAAATTATGTCCCAATTCATaGGTTGTAACCAGGTCAGCTTCCTTTGTAAGGATGGTTTTACCA +
Preference number: 1 (lower is better)
Translates to: RPSGSCSAPKLCPNS*VVTRSASFVRMVLP
Trigger: TGGTAAAACCATCCTTACAAAGGAAGCTGACCTGGTTACAACTCATGAATTGGGACATAATTTTGGAGCAGAACATGATCCGGATGGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR GCA 90 bp TCTCCAACATACTGTGAAATGAAAAAGCAAGGTGTAAAAGTGTACTaGATAGCACCGTTGTGTCAAATACAGACATATACATACACTATA +
Preference number: 1 (lower is better)
Translates to: SPTYCEMKKQGVKVY*IAPLCQIQTYTYTI
Trigger: TATAGTGTATGTATATGTCTGTATTTGACACAACGGTGCTATGCAGTACACTTTTACACCTTGCTTTTTCATTTCACAGTATGTTGGAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618923.2
3UTR CAA 90 bp TGCTGGGGTCTTCCTGGATGGTGTCCATTCTCTGGTGGTCCAGTTTaGGAGCTGCTGGCGCCGAAGGGATCACAGGGGCAGGCTGCAGGC +
Preference number: 2 (lower is better)
Translates to: CWGLPGWCPFSGGPV*ELLAPKGSQGQAAG
Trigger: GCCTGCAGCCTGCCCCTGTGATCCCTTCGGCGCCAGCAGCTCCAAAACTGGACCACCAGAGAATGGACACCATCCAGGAAGACCCCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CCA 90 bp TCTCTGGTGGTCCAGTTTTGGAGCTGCTGGCGCCGAAGGGATCACAGGGGCAGGGTGCTGGGGTCTTCCTaGATGGTGTCCATTCTCTGG +
Preference number: 2 (lower is better)
Translates to: SLVVQFWSCWRRRDHRGRVLGSS*MVSILW
Trigger: CCAGAGAATGGACACCATCCAGGAAGACCCCAGCAC...CCTGCCCCTGTGATCCCTTCGGCGCCAGCAGCTCCAAAACTGGACCACCAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp CAGCATCGACATAGGGCACACAGCGGCCAGAAAGGTCCCTGCAGCACACCTTGCACGTGCAGTCGCTGTTaGAGCAGGTGTCGTTGTTCA +
Preference number: 2 (lower is better)
Translates to: QHRHRAHSGQKGPCSTPCTCSRC*SRCRCS
Trigger: TGAACAACGACACCTGCTGCAACAGCGACTGCACGT...GCAAGGTGTGCTGCAGGGACCTTTCTGGCCGCTGTGTGCCCTATGTCGATGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp TCTCTGGTGGTCCAGTTTTGGAGCTGCTGGCGCCGAAGGGATCACAGGGGCAGGCCCTGCAGCACACCTTaGAGGAGTTGTCAGTTTCAT +
Preference number: 2 (lower is better)
Translates to: SLVVQFWSCWRRRDHRGRPCSTP*RSCQFH
Trigger: ATGAAACTGACAACTCCTGCAAGGTGTGCTGCAGGG...CCTGCCCCTGTGATCCCTTCGGCGCCAGCAGCTCCAAAACTGGACCACCAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CCA 90 bp TCTCTGGTGGTCCAGTTTTGGAGCTGCTGGCGCCGAAGGGATCACAGGGGCAGGACATATTTCCCTCCCTaGTCCTCATTCGGGGCACAT +
Preference number: 2 (lower is better)
Translates to: SLVVQFWSCWRRRDHRGRTYFPP*SSFGAH
Trigger: ATGTGCCCCGAATGAGGACCAGGGAGGGAAATATGT...CCTGCCCCTGTGATCCCTTCGGCGCCAGCAGCTCCAAAACTGGACCACCAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CCA 90 bp CTTCTGGTGACCGGATGGTCCGTGAGATCCTCAAATGACTTGGCAGCTGTGCTGCAGTTTTGGAGCTGCTaGCGCCGAAGGGATCACAGG +
Preference number: 2 (lower is better)
Translates to: LLVTGWSVRSSNDLAAVLQFWSC*RRRDHR
Trigger: CCTGTGATCCCTTCGGCGCCAGCAGCTCCAAAACTG...CAGCACAGCTGCCAAGTCATTTGAGGATCTCACGGACCATCCGGTCACCAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR TCA 90 bp TCTCTGGTGGTCCAGTTTTGGAGCTGCTGGCGCCGAAGGGATCACAGGGGCAGGTTATTGCTGCGTTCTTaGAAACACTCCTGGGCCTTA +
Preference number: 2 (lower is better)
Translates to: SLVVQFWSCWRRRDHRGRLLLRS*KHSWAL
Trigger: TAAGGCCCAGGAGTGTTTTCAAGAACGCAGCAATAA...CCTGCCCCTGTGATCCCTTCGGCGCCAGCAGCTCCAAAACTGGACCACCAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp TCCGTGAGATCCTCAAATGACTTGGCAGCTGTGCTGCTATTTGGGAAGGGGTCCCACCTTCCTTCAACGTaGAGTCGCTGTTGCAGCAGG +
Preference number: 2 (lower is better)
Translates to: SVRSSNDLAAVLLFGKGSHLPST*SRCCSR
Trigger: CCTGCTGCAACAGCGACTGCACGTTGAAGGAAGGTG...GGACCCCTTCCCAAATAGCAGCACAGCTGCCAAGTCATTTGAGGATCTCACGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp AGGACTCCAGCTGCTGTTCCCTCTCGCAGAAAGGGATGCATTTCCCATCCTTACCACCTTCCTTCAACGTaGAGTCGCTGTTGCAGCAGG +
Preference number: 2 (lower is better)
Translates to: RTPAAVPSRRKGCISHPYHLPST*SRCCSR
Trigger: CCTGCTGCAACAGCGACTGCACGTTGAAGGAAGGTG...GTAAGGATGGGAAATGCATCCCTTTCTGCGAGAGGGAACAGCAGCTGGAGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp AGCATTTCCTGGAGGCGGGCACTCACTGCTATTACCTGTGCAGTAGGACACGCCGACTGTTCCTGTCACTaGACTGGACACCTTCCTTCA +
Preference number: 2 (lower is better)
Translates to: SISWRRALTAITCAVGHADCSCH*TGHLPS
Trigger: TGAAGGAAGGTGTCCAGTGCAGTGACAGGAACAGTC...GGCGTGTCCTACTGCACAGGTAATAGCAGTGAGTGCCCGCCTCCAGGAAATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp AGGACTGTTCCTGTCACTGCACTGGACACCTTCCTTCAACGTGCAGTCGCTGTTGAGGCGGGCACTCACTaGTATTACCTGTGCAGTAGG +
Preference number: 2 (lower is better)
Translates to: RTVPVTALDTFLQRAVAVEAGTH*YYLCSR
Trigger: CCTACTGCACAGGTAATAGCAGTGAGTGCCCGCCTC...AACAGCGACTGCACGTTGAAGGAAGGTGTCCAGTGCAGTGACAGGAACAGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp GCACAGGACTCCAGCTGCTGTTCCCTCTCGCAGAAAGGGATGCATTTCCCATCCCCCTGCAGCACACCTTaGAGGAGTTGTCAGTTTCAT +
Preference number: 2 (lower is better)
Translates to: AQDSSCCSLSQKGMHFPSPCSTP*RSCQFH
Trigger: ATGAAACTGACAACTCCTGCAAGGTGTGCTGCAGGG...GGATGGGAAATGCATCCCTTTCTGCGAGAGGGAACAGCAGCTGGAGTCCTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp CTTCTGGTGACCGGATGGTCCGTGAGATCCTCAAATGACTTGGCAGCTGTGCTGCCATATGTGAGTCTGTaGTGGGGTCTTCCTGGATGG +
Preference number: 2 (lower is better)
Translates to: LLVTGWSVRSSNDLAAVLPYVSL*WGLPGW
Trigger: CCATCCAGGAAGACCCCAGCACAGACTCACATATGG...CAGCACAGCTGCCAAGTCATTTGAGGATCTCACGGACCATCCGGTCACCAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR TCA 90 bp AGCATTTCCTGGAGGCGGGCACTCACTGCTATTACCTGTGCAGTAGGACACGCCCCTCTTGTGGAGACTTaGGAATGCGAATCTGCTCTA +
Preference number: 2 (lower is better)
Translates to: SISWRRALTAITCAVGHAPLVET*ECESAL
Trigger: TAGAGCAGATTCGCATTCTCAAGTCTCCACAAGAGG...GGCGTGTCCTACTGCACAGGTAATAGCAGTGAGTGCCCGCCTCCAGGAAATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR TCA 90 bp GGTCCTTCTCAAACCCATCCTCGTCCATATGTGAGTCTGTGCTGGGGTCTTCCTCGTGAGATCCTCAAATaGCTTGGCAGCTGTGCTGCT +
Preference number: 2 (lower is better)
Translates to: GPSQTHPRPYVSLCWGLPREILK*LGSCAA
Trigger: AGCAGCACAGCTGCCAAGTCATTTGAGGATCTCACG...AGGAAGACCCCAGCACAGACTCACATATGGACGAGGATGGGTTTGAGAAGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp CAGCATCGACATAGGGCACACAGCGGCCAGAAAGGTCCCTGCAGCACACCTTGCTCCAGCTGTATTTTCTaGTTTTGCACCACAGGTCAA +
Preference number: 2 (lower is better)
Translates to: QHRHRAHSGQKGPCSTPCSSCIF*FCTTGQ
Trigger: TTGACCTGTGGTGCAAAAGCAGAAAATACAGCTGGA...GCAAGGTGTGCTGCAGGGACCTTTCTGGCCGCTGTGTGCCCTATGTCGATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp CTTCTGGTGACCGGATGGTCCGTGAGATCCTCAAATGACTTGGCAGCTGTGCTGACCTCCATGGCTGTTTaGTCTGGGAGAGCCAACATA +
Preference number: 2 (lower is better)
Translates to: LLVTGWSVRSSNDLAAVLTSMAV*SGRANI
Trigger: TATGTTGGCTCTCCCAGAGCAAACAGCCATGGAGGT...CAGCACAGCTGCCAAGTCATTTGAGGATCTCACGGACCATCCGGTCACCAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp ACTCCAGCTGCTGTTCCCTCTCGCAGAAAGGGATGCATTTCCCATCCTTACACTGCACAGGACTCCAGCTaGTGTTCCCTCTCGCAGAAA +
Preference number: 2 (lower is better)
Translates to: TPAAVPSRRKGCISHPYTAQDSS*CSLSQK
Trigger: TTTCTGCGAGAGGGAACAGCAGCTGGAGTCCTGTGC...AGTGTAAGGATGGGAAATGCATCCCTTTCTGCGAGAGGGAACAGCAGCTGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CCA 90 bp GCACAGGACTCCAGCTGCTGTTCCCTCTCGCAGAAAGGGATGCATTTCCCATCCTACACGTGTTCTTCATaGGATCTGGGTCAGCTCTTC +
Preference number: 2 (lower is better)
Translates to: AQDSSCCSLSQKGMHFPSYTCSS*DLGQLF
Trigger: GAAGAGCTGACCCAGATCCCATGAAGAACACGTGTA...GGATGGGAAATGCATCCCTTTCTGCGAGAGGGAACAGCAGCTGGAGTCCTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CCA 90 bp TTCCTGGATGGTGTCCATTCTCTGGTGGTCCAGTTTTGGAGCTGCTGGCGCCGACATGGCTGTTTGCTCTaGGAGAGCCAACATAAGCTA +
Preference number: 2 (lower is better)
Translates to: FLDGVHSLVVQFWSCWRRHGCLL*ESQHKL
Trigger: TAGCTTATGTTGGCTCTCCCAGAGCAAACAGCCATG...TCGGCGCCAGCAGCTCCAAAACTGGACCACCAGAGAATGGACACCATCCAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CCA 90 bp TCTCAAACCCATCCTCGTCCATATGTGAGTCTGTGCTGGGGTCTTCCTGGATGGGGACAAACACCTCCATaGCTGTTTGCTCTGGGAGAG +
Preference number: 2 (lower is better)
Translates to: SQTHPRPYVSLCWGLPGWGQTPP*LFALGE
Trigger: CTCTCCCAGAGCAAACAGCCATGGAGGTGTTTGTCC...CCATCCAGGAAGACCCCAGCACAGACTCACATATGGACGAGGATGGGTTTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CCA 90 bp AGGACTGTTCCTGTCACTGCACTGGACACCTTCCTTCAACGTGCAGTCGCTGTTGCATTAATCGCCTCCTaGCACTTCTTCTGGGCAGTC +
Preference number: 2 (lower is better)
Translates to: RTVPVTALDTFLQRAVAVALIAS*HFFWAV
Trigger: GACTGCCCAGAAGAAGTGCCAGGAGGCGATTAATGC...AACAGCGACTGCACGTTGAAGGAAGGTGTCCAGTGCAGTGACAGGAACAGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CCA 90 bp GGAAAGGGTTTGATAATGCGAACCGATGCAGAATCCATGCTGCTCAGCATTTCGCTGGTGGTCCAGTTTTaGAGCTGCTGGCGCCGAAGG +
Preference number: 2 (lower is better)
Translates to: GKGLIMRTDAESMLLSISLVVQF*SCWRRR
Trigger: CCTTCGGCGCCAGCAGCTCCAAAACTGGACCACCAG...CGAAATGCTGAGCAGCATGGATTCTGCATCGGTTCGCATTATCAAACCCTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR CAA 90 bp TTCCTGTCACTGCACTGGACACCTTCCTTCAACGTGCAGTCGCTGTaGCAGCAGGTGTCGTTGTTCAGATACATGATGCCAGGATCACAC +
Preference number: 2 (lower is better)
Translates to: FLSLHWTPSFNVQSL*QQVSLFRYMMPGSH
Trigger: GTGTGATCCTGGCATCATGTATCTGAACAACGACACCTGCTGCAACAGCGACTGCACGTTGAAGGAAGGTGTCCAGTGCAGTGACAGGAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR TCA 90 bp CACAGGACTCCAGCTGCTGTTCCCTCTCGCAGAAAGGGATGCATTTCCCATCCTCCTCTTGTGGAGACTTaGGAATGCGAATCTGCTCTA +
Preference number: 2 (lower is better)
Translates to: HRTPAAVPSRRKGCISHPPLVET*ECESAL
Trigger: TAGAGCAGATTCGCATTCTCAAGTCTCCACAAGAGG...AGGATGGGAAATGCATCCCTTTCTGCGAGAGGGAACAGCAGCTGGAGTCCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR TCA 90 bp GTCACTGCACTGGACACCTTCCTTCAACGTGCAGTCGCTGTTGCAGCAGGTGTCATCTTATTGTTCTCGTaGTCGCCACTCACAGCTATG +
Preference number: 2 (lower is better)
Translates to: VTALDTFLQRAVAVAAGVILLFS*SPLTAM
Trigger: CATAGCTGTGAGTGGCGATCACGAGAACAATAAGAT...GACACCTGCTGCAACAGCGACTGCACGTTGAAGGAAGGTGTCCAGTGCAGTGAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR TCA 90 bp TCCATTCTCTGGTGGTCCAGTTTTGGAGCTGCTGGCGCCGAAGGGATCACAGGGCCACCACCACGACCTTaGAATTTTGTGAAAAACGTT +
Preference number: 2 (lower is better)
Translates to: SILWWSSFGAAGAEGITGPPPRP*NFVKNV
Trigger: AACGTTTTTCACAAAATTTCAAGGTCGTGGTGGTGG...CCCTGTGATCCCTTCGGCGCCAGCAGCTCCAAAACTGGACCACCAGAGAATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp ACAGGACTCCAGCTGCTGTTCCCTCTCGCAGAAAGGGATGCATTTCCCATCCTTACCTCCATGGCTGTTTaGTCTGGGAGAGCCAACATA +
Preference number: 2 (lower is better)
Translates to: TGLQLLFPLAERDAFPILTSMAV*SGRANI
Trigger: TATGTTGGCTCTCCCAGAGCAAACAGCCATGGAGGT...AAGGATGGGAAATGCATCCCTTTCTGCGAGAGGGAACAGCAGCTGGAGTCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp TTCAGCATTTCCTGGAGGCGGGCACTCACTGCTATTACCTGTGCAGTAGGACACGACTGTTCCTGTCACTaGACTGGACACCTTCCTTCA +
Preference number: 2 (lower is better)
Translates to: FSISWRRALTAITCAVGHDCSCH*TGHLPS
Trigger: TGAAGGAAGGTGTCCAGTGCAGTGACAGGAACAGTC...GTGTCCTACTGCACAGGTAATAGCAGTGAGTGCCCGCCTCCAGGAAATGCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CCA 90 bp TCTCAAACCCATCCTCGTCCATATGTGAGTCTGTGCTGGGGTCTTCCTGGATGGTTCCTGTCACTGCACTaGACACCTTCCTTCAACGTG +
Preference number: 2 (lower is better)
Translates to: SQTHPRPYVSLCWGLPGWFLSLH*TPSFNV
Trigger: CACGTTGAAGGAAGGTGTCCAGTGCAGTGACAGGAA...CCATCCAGGAAGACCCCAGCACAGACTCACATATGGACGAGGATGGGTTTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CCA 90 bp AACCCATCCTCGTCCATATGTGAGTCTGTGCTGGGGTCTTCCTGGATGGTGTCCGCATTTCGACGTTACTaGGGTGAAACAGAGACAGAG +
Preference number: 2 (lower is better)
Translates to: NPSSSICESVLGSSWMVSAFRRY*GETETE
Trigger: CTCTGTCTCTGTTTCACCCCAGTAACGTCGAAATGC...GGACACCATCCAGGAAGACCCCAGCACAGACTCACATATGGACGAGGATGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR CAA 90 bp TGGACACCTTCCTTCAACGTGCAGTCGCTGTTGCAGCAGGTGTCGTaGTTCAGATACATGATGCCAGGATCACACTCTTCTCCTTCATCC +
Preference number: 2 (lower is better)
Translates to: WTPSFNVQSLLQQVS*FRYMMPGSHSSPSS
Trigger: GGATGAAGGAGAAGAGTGTGATCCTGGCATCATGTATCTGAACAACGACACCTGCTGCAACAGCGACTGCACGTTGAAGGAAGGTGTCCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR TCA 90 bp TGTCACTGCACTGGACACCTTCCTTCAACGTGCAGTCGCTGTTGCAGCAGGTGTATCTTATTGTTCTCGTaGTCGCCACTCACAGCTATG +
Preference number: 2 (lower is better)
Translates to: CHCTGHLPSTCSRCCSRCILLFS*SPLTAM
Trigger: CATAGCTGTGAGTGGCGATCACGAGAACAATAAGAT...ACACCTGCTGCAACAGCGACTGCACGTTGAAGGAAGGTGTCCAGTGCAGTGACA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR TCA 90 bp AAGGGGTCCTTCTCAAACCCATCCTCGTCCATATGTGAGTCTGTGCTGGGGTCTTCGACGTTACTGGGGTaGAACAGAGACAGAGATTCA +
Preference number: 2 (lower is better)
Translates to: KGSFSNPSSSICESVLGSSTLLG*NRDRDS
Trigger: TGAATCTCTGTCTCTGTTTCACCCCAGTAACGTCGA...AGACCCCAGCACAGACTCACATATGGACGAGGATGGGTTTGAGAAGGACCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp CAGCATCGACATAGGGCACACAGCGGCCAGAAAGGTCCCTGCAGCACACCTTGCTCCCACAAACTTTATTaGTGCGTTCTTGAAAACACT +
Preference number: 2 (lower is better)
Translates to: QHRHRAHSGQKGPCSTPCSHKLY*CVLENT
Trigger: AGTGTTTTCAAGAACGCAGCAATAAAGTTTGTGGGA...GCAAGGTGTGCTGCAGGGACCTTTCTGGCCGCTGTGTGCCCTATGTCGATGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp GTTCCCTCTCGCAGAAAGGGATGCATTTCCCATCCTTACACTTGCCAAGATCCAACGTGCAGTCGCTGTTaGAGCAGGTGTCGTTGTTCA +
Preference number: 2 (lower is better)
Translates to: VPSRRKGCISHPYTCQDPTCSRC*SRCRCS
Trigger: TGAACAACGACACCTGCTGCAACAGCGACTGCACGT...TGGATCTTGGCAAGTGTAAGGATGGGAAATGCATCCCTTTCTGCGAGAGGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp GCTGTCAACACGATTCTGACGCTGCAGTTTAAAGGAGGCAGCCTTTTCACTTCTCACCTTCCTTCAACGTaGAGTCGCTGTTGCAGCAGG +
Preference number: 2 (lower is better)
Translates to: AVNTILTLQFKGGSLFTSHLPST*SRCCSR
Trigger: CCTGCTGCAACAGCGACTGCACGTTGAAGGAAGGTG...AGAAGTGAAAAGGCTGCCTCCTTTAAACTGCAGCGTCAGAATCGTGTTGACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp TTTGTTCAGCATCGACATAGGGCACACAGCGGCCAGAAAGGTCCCTGCAGCACACCAGTGAAGAAGTCCTaGCATTTTACAGTGTACTCG +
Preference number: 2 (lower is better)
Translates to: FVQHRHRAHSGQKGPCSTPVKKS*HFTVYS
Trigger: CGAGTACACTGTAAAATGGCAGGACTTCTTCACTGG...TGTGCTGCAGGGACCTTTCTGGCCGCTGTGTGCCCTATGTCGATGCTGAACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CCA 90 bp CTTCTGGTGACCGGATGGTCCGTGAGATCCTCAAATGACTTGGCAGCTGTGCTGGTTCTTCATGGGATCTaGGTCAGCTCTTCTTTTCAC +
Preference number: 2 (lower is better)
Translates to: LLVTGWSVRSSNDLAAVLVLHGI*VSSSFH
Trigger: GTGAAAAGAAGAGCTGACCCAGATCCCATGAAGAAC...CAGCACAGCTGCCAAGTCATTTGAGGATCTCACGGACCATCCGGTCACCAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CCA 90 bp TCTCAAACCCATCCTCGTCCATATGTGAGTCTGTGCTGGGGTCTTCCTGGATGGTACACGTGTTCTTCATaGGATCTGGGTCAGCTCTTC +
Preference number: 2 (lower is better)
Translates to: SQTHPRPYVSLCWGLPGWYTCSS*DLGQLF
Trigger: GAAGAGCTGACCCAGATCCCATGAAGAACACGTGTA...CCATCCAGGAAGACCCCAGCACAGACTCACATATGGACGAGGATGGGTTTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CCA 90 bp CTATTTGGGAAGGGGTCCTTCTCAAACCCATCCTCGTCCATATGTGAGTCTGTGATCTTCAGCATTTCCTaGAGGCGGGCACTCACTGCT +
Preference number: 2 (lower is better)
Translates to: LFGKGSFSNPSSSICESVIFSIS*RRALTA
Trigger: AGCAGTGAGTGCCCGCCTCCAGGAAATGCTGAAGAT...CACAGACTCACATATGGACGAGGATGGGTTTGAGAAGGACCCCTTCCCAAATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CCA 90 bp TCCGTGAGATCCTCAAATGACTTGGCAGCTGTGCTGCTATTTGGGAAGGGGTCCGCATTTCGACGTTACTaGGGTGAAACAGAGACAGAG +
Preference number: 2 (lower is better)
Translates to: SVRSSNDLAAVLLFGKGSAFRRY*GETETE
Trigger: CTCTGTCTCTGTTTCACCCCAGTAACGTCGAAATGC...GGACCCCTTCCCAAATAGCAGCACAGCTGCCAAGTCATTTGAGGATCTCACGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR TCA 90 bp CACAGGACTCCAGCTGCTGTTCCCTCTCGCAGAAAGGGATGCATTTCCCATCCTTTATGTCCCAATTCATaGGTTGTAACCAGGTCAGCT +
Preference number: 2 (lower is better)
Translates to: HRTPAAVPSRRKGCISHPLCPNS*VVTRSA
Trigger: AGCTGACCTGGTTACAACTCATGAATTGGGACATAA...AGGATGGGAAATGCATCCCTTTCTGCGAGAGGGAACAGCAGCTGGAGTCCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR TCA 90 bp AGGACTCCAGCTGCTGTTCCCTCTCGCAGAAAGGGATGCATTTCCCATCCTTACTTATTGCTGCGTTCTTaGAAACACTCCTGGGCCTTA +
Preference number: 2 (lower is better)
Translates to: RTPAAVPSRRKGCISHPYLLLRS*KHSWAL
Trigger: TAAGGCCCAGGAGTGTTTTCAAGAACGCAGCAATAA...GTAAGGATGGGAAATGCATCCCTTTCTGCGAGAGGGAACAGCAGCTGGAGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR TCA 90 bp AAGGGGTCCTTCTCAAACCCATCCTCGTCCATATGTGAGTCTGTGCTGGGGTCTCGTTGTTCAGATACATaGTGCCAGGATCACACTCTT +
Preference number: 2 (lower is better)
Translates to: KGSFSNPSSSICESVLGSRCSDT*CQDHTL
Trigger: AAGAGTGTGATCCTGGCATCATGTATCTGAACAACG...AGACCCCAGCACAGACTCACATATGGACGAGGATGGGTTTGAGAAGGACCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp AACCCATCCTCGTCCATATGTGAGTCTGTGCTGGGGTCTTCCTGGATGGTGTCCTCCAGCTGTATTTTCTaGTTTTGCACCACAGGTCAA +
Preference number: 2 (lower is better)
Translates to: NPSSSICESVLGSSWMVSSSCIF*FCTTGQ
Trigger: TTGACCTGTGGTGCAAAAGCAGAAAATACAGCTGGA...GGACACCATCCAGGAAGACCCCAGCACAGACTCACATATGGACGAGGATGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp CTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAAGTGGCCAGAAAGGTCCCTaGAGCACACCTTGCAGGAGT +
Preference number: 2 (lower is better)
Translates to: LFKRRRAKPHKNCLPAGSGQKGP*STPCRS
Trigger: ACTCCTGCAAGGTGTGCTGCAGGGACCTTTCTGGCC...ACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp CAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAACACATGACCAGCATCGGCCAGAAAGGTCCCTaGAGCACACCTTGCAGGAGT +
Preference number: 2 (lower is better)
Translates to: QTTQELFTCRKFKHMTSIGQKGP*STPCRS
Trigger: ACTCCTGCAAGGTGTGCTGCAGGGACCTTTCTGGCC...GATGCTGGTCATGTGTTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CCA 90 bp CTTCTGGTGACCGGATGGTCCGTGAGATCCTCAAATGACTTGGCAGCTGTGCTGGCTATAATAAGCCTTTaGACAAACACCTCCATGGCT +
Preference number: 2 (lower is better)
Translates to: LLVTGWSVRSSNDLAAVLAIISL*TNTSMA
Trigger: AGCCATGGAGGTGTTTGTCCAAAGGCTTATTATAGC...CAGCACAGCTGCCAAGTCATTTGAGGATCTCACGGACCATCCGGTCACCAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CCA 90 bp GTTCCTGTCACTGCACTGGACACCTTCCTTCAACGTGCAGTCGCTGTTGCAGCAGCTATAATAAGCCTTTaGACAAACACCTCCATGGCT +
Preference number: 2 (lower is better)
Translates to: VPVTALDTFLQRAVAVAAAIISL*TNTSMA
Trigger: AGCCATGGAGGTGTTTGTCCAAAGGCTTATTATAGC...TGCTGCAACAGCGACTGCACGTTGAAGGAAGGTGTCCAGTGCAGTGACAGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CCA 90 bp AACCGATGCAGAATCCATGCTGCTCAGCATTTCGACGTTACTGGGGTGAAACAGACATATTTCCCTCCCTaGTCCTCATTCGGGGCACAT +
Preference number: 2 (lower is better)
Translates to: NRCRIHAAQHFDVTGVKQTYFPP*SSFGAH
Trigger: ATGTGCCCCGAATGAGGACCAGGGAGGGAAATATGT...CTGTTTCACCCCAGTAACGTCGAAATGCTGAGCAGCATGGATTCTGCATCGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CCA 90 bp CTGAGAACTAAATTAGCACTCTGTTTCTTTGCTGTCAACACGATTCTGACGCTGCTGGTGGTCCAGTTTTaGAGCTGCTGGCGCCGAAGG +
Preference number: 2 (lower is better)
Translates to: LRTKLALCFFAVNTILTLLVVQF*SCWRRR
Trigger: CCTTCGGCGCCAGCAGCTCCAAAACTGGACCACCAG...CAGCGTCAGAATCGTGTTGACAGCAAAGAAACAGAGTGCTAATTTAGTTCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CCA 90 bp CTATTTGGGAAGGGGTCCTTCTCAAACCCATCCTCGTCCATATGTGAGTCTGTGCTTCTGGTGACCGGATaGTCCGTGAGATCCTCAAAT +
Preference number: 2 (lower is better)
Translates to: LFGKGSFSNPSSSICESVLLVTG*SVRSSN
Trigger: ATTTGAGGATCTCACGGACCATCCGGTCACCAGAAG...CACAGACTCACATATGGACGAGGATGGGTTTGAGAAGGACCCCTTCCCAAATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp TCCATTCTCTGGTGGTCCAGTTTTGGAGCTGCTGGCGCCGAAGGGATCACAGGGATTTGGGTAACTTTTTaGCATGTTGTAGTGCTTTTC +
Preference number: 2 (lower is better)
Translates to: SILWWSSFGAAGAEGITGIWVTF*HVVVLF
Trigger: GAAAAGCACTACAACATGGCAAAAAGTTACCCAAAT...CCCTGTGATCCCTTCGGCGCCAGCAGCTCCAAAACTGGACCACCAGAGAATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp CTGTTGCAGCAGGTGTCGTTGTTCAGATACATGATGCCAGGATCACACTCTTCTGACTGTTCCTGTCACTaGACTGGACACCTTCCTTCA +
Preference number: 2 (lower is better)
Translates to: LLQQVSLFRYMMPGSHSSDCSCH*TGHLPS
Trigger: TGAAGGAAGGTGTCCAGTGCAGTGACAGGAACAGTC...AGAAGAGTGTGATCCTGGCATCATGTATCTGAACAACGACACCTGCTGCAACAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CCA 90 bp CCTGGTCCTCATTCGGGGCACATTCTGCTAGACCATCCGGATCATGTTCTGCTCTTCCATAAATTCAACTaGCTACCATGTATAGCCCTC +
Preference number: 2 (lower is better)
Translates to: PGPHSGHILLDHPDHVLLFHKFN*LPCIAL
Trigger: GAGGGCTATACATGGTAGCCAGTTGAATTTATGGAA...GAGCAGAACATGATCCGGATGGTCTAGCAGAATGTGCCCCGAATGAGGACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649227.1
3UTR-3UTR CCA 90 bp AAGGTCCCTGCAGCACACCTTGCAGGAGTTGTCAGTTTCATTACATGCACAGGACATGGCTGTTTGCTCTaGGAGAGCCAACATAAGCTA +
Preference number: 2 (lower is better)
Translates to: KVPAAHLAGVVSFITCTGHGCLL*ESQHKL
Trigger: TAGCTTATGTTGGCTCTCCCAGAGCAAACAGCCATG...TCCTGTGCATGTAATGAAACTGACAACTCCTGCAAGGTGTGCTGCAGGGACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CCA 90 bp TATGGGATACATGACATATTTCCCTCCCTGGTCCTCATTCGGGGCACATTCTGCCATGGCTGTTTGCTCTaGGAGAGCCAACATAAGCTA +
Preference number: 2 (lower is better)
Translates to: YGIHDIFPSLVLIRGTFCHGCLL*ESQHKL
Trigger: TAGCTTATGTTGGCTCTCCCAGAGCAAACAGCCATG...GCAGAATGTGCCCCGAATGAGGACCAGGGAGGGAAATATGTCATGTATCCCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CCA 90 bp CATCCACCCTCGAGTTCCCACAAACTTTATTGCTGCGTTCTTGAAAACACTCCTGGACAAACACCTCCATaGCTGTTTGCTCTGGGAGAG +
Preference number: 2 (lower is better)
Translates to: HPPSSSHKLYCCVLENTPGQTPP*LFALGE
Trigger: CTCTCCCAGAGCAAACAGCCATGGAGGTGTTTGTCC...AGGAGTGTTTTCAAGAACGCAGCAATAAAGTTTGTGGGAACTCGAGGGTGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CCA 90 bp CATCCACCCTCGAGTTCCCACAAACTTTATTGCTGCGTTCTTGAAAACACTCCTGCATTAATCGCCTCCTaGCACTTCTTCTGGGCAGTC +
Preference number: 2 (lower is better)
Translates to: HPPSSSHKLYCCVLENTPALIAS*HFFWAV
Trigger: GACTGCCCAGAAGAAGTGCCAGGAGGCGATTAATGC...AGGAGTGTTTTCAAGAACGCAGCAATAAAGTTTGTGGGAACTCGAGGGTGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CCA 90 bp AAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAACACATGACCTGGGGTCTTCCTGGATaGTGTCCATTCTCTGGTGGT +
Preference number: 2 (lower is better)
Translates to: KGQTTQELFTCRKFKHMTWGLPG*CPFSGG
Trigger: ACCACCAGAGAATGGACACCATCCAGGAAGACCCCA...GGTCATGTGTTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR CAA 90 bp TGCTGTTCCCTCTCGCAGAAAGGGATGCATTTCCCATCCTTACACTaGCCAAGATCCAAGCAAACAGTGTCATCTTCAGCATTTCCTGGA +
Preference number: 2 (lower is better)
Translates to: CCSLSQKGMHFPSLH*PRSKQTVSSSAFPG
Trigger: TCCAGGAAATGCTGAAGATGACACTGTTTGCTTGGATCTTGGCAAGTGTAAGGATGGGAAATGCATCCCTTTCTGCGAGAGGGAACAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR TCA 90 bp CTATTTGGGAAGGGGTCCTTCTCAAACCCATCCTCGTCCATATGTGAGTCTGTGGGAAGTTCAAACACATaGCCAGCATCTGCTAAGTCA +
Preference number: 2 (lower is better)
Translates to: LFGKGSFSNPSSSICESVGSSNT*PASAKS
Trigger: TGACTTAGCAGATGCTGGTCATGTGTTTGAACTTCC...CACAGACTCACATATGGACGAGGATGGGTTTGAGAAGGACCCCTTCCCAAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR TCA 90 bp CAGAATCCATGCTGCTCAGCATTTCGACGTTACTGGGGTGAAACAGAGACAGAGATCTTATTGTTCTCGTaGTCGCCACTCACAGCTATG +
Preference number: 2 (lower is better)
Translates to: QNPCCSAFRRYWGETETEILLFS*SPLTAM
Trigger: CATAGCTGTGAGTGGCGATCACGAGAACAATAAGAT...CTCTGTCTCTGTTTCACCCCAGTAACGTCGAAATGCTGAGCAGCATGGATTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR TCA 90 bp TGCAGGAGTTGTCAGTTTCATTACATGCACAGGACTCCAGCTGCTGTTCCCTCTCGTTGTTCAGATACATaGTGCCAGGATCACACTCTT +
Preference number: 2 (lower is better)
Translates to: CRSCQFHYMHRTPAAVPSRCSDT*CQDHTL
Trigger: AAGAGTGTGATCCTGGCATCATGTATCTGAACAACG...AGAGGGAACAGCAGCTGGAGTCCTGTGCATGTAATGAAACTGACAACTCCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR TCA 90 bp CCAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAACACATGACCAGCATCGTGAGATCCTCAAATaGCTTGGCAGCTGTGCTGCT +
Preference number: 2 (lower is better)
Translates to: PNHTRTVYLQEVQTHDQHREILK*LGSCAA
Trigger: AGCAGCACAGCTGCCAAGTCATTTGAGGATCTCACG...ATGCTGGTCATGTGTTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR TCA 90 bp CTTCTGGTGACCGGATGGTCCGTGAGATCCTCAAATGACTTGGCAGCTGTGCTGGAACAAGCTCTAATATaGATTTGTATGCACTTCAGG +
Preference number: 2 (lower is better)
Translates to: LLVTGWSVRSSNDLAAVLEQALI*ICMHFR
Trigger: CCTGAAGTGCATACAAATTCATATTAGAGCTTGTTC...CAGCACAGCTGCCAAGTCATTTGAGGATCTCACGGACCATCCGGTCACCAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647610.1
ENST00000650116.1
3UTR-3UTR TCA 90 bp AATAAGCCTTTGGACAAACACCTCCATGGCTGTTTGCTCTGGGAGAGCCAACATCAACCACGTGTCCAGTaGAGAAGTCCTGCCATTTTA +
Preference number: 2 (lower is better)
Translates to: NKPLDKHLHGCLLWESQHQPRVQ*RSPAIL
Trigger: TAAAATGGCAGGACTTCTTCACTGGACACGTGGTTG...ATGTTGGCTCTCCCAGAGCAAACAGCCATGGAGGTGTTTGTCCAAAGGCTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp TCTTTTGTTCAGCATCGACATAGGGCACACAGCGGCCAGAAAGGTCCCTGCAGCCAAATAAATGCCAAATaGCTCATATTCAGCGGTTCA +
Preference number: 2 (lower is better)
Translates to: SFVQHRHRAHSGQKGPCSQINAK*LIFSGS
Trigger: TGAACCGCTGAATATGAGGCATTTGGCATTTATTTG...GCTGCAGGGACCTTTCTGGCCGCTGTGTGCCCTATGTCGATGCTGAACAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647979.1
ENST00000649227.1
3UTR-3UTR GCA 90 bp GCACAGGACTCCAGCTGCTGTTCCCTCTCGCAGAAAGGGATGCATTTCCCATCCATTTGGGTAACTTTTTaGCATGTTGTAGTGCTTTTC +
Preference number: 2 (lower is better)
Translates to: AQDSSCCSLSQKGMHFPSIWVTF*HVVVLF
Trigger: GAAAAGCACTACAACATGGCAAAAAGTTACCCAAAT...GGATGGGAAATGCATCCCTTTCTGCGAGAGGGAACAGCAGCTGGAGTCCTGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp ACAGGACTCCAGCTGCTGTTCCCTCTCGCAGAAAGGGATGCATTTCCCATCCTTGTATGTGAAAAGGTGTaGCAAGCAAACTTTAGATGC +
Preference number: 2 (lower is better)
Translates to: TGLQLLFPLAERDAFPILVCEKV*QANFRC
Trigger: GCATCTAAAGTTTGCTTGGCACACCTTTTCACATAC...AAGGATGGGAAATGCATCCCTTTCTGCGAGAGGGAACAGCAGCTGGAGTCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp TCCGTGAGATCCTCAAATGACTTGGCAGCTGTGCTGCTATTTGGGAAGGGGTCCATCCGGATCATGTTCTaGTCCAAAATTATGTCCCAA +
Preference number: 2 (lower is better)
Translates to: SVRSSNDLAAVLLFGKGSIRIMF*SKIMSQ
Trigger: TTGGGACATAATTTTGGAGCAGAACATGATCCGGAT...GGACCCCTTCCCAAATAGCAGCACAGCTGCCAAGTCATTTGAGGATCTCACGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp TCTTTTGTTCAGCATCGACATAGGGCACACAGCGGCCAGAAAGGTCCCTGCAGCCACAAACTTTATTGCTaGGTTCTTGAAAACACTCCT +
Preference number: 2 (lower is better)
Translates to: SFVQHRHRAHSGQKGPCSHKLYC*VLENTP
Trigger: AGGAGTGTTTTCAAGAACGCAGCAATAAAGTTTGTG...GCTGCAGGGACCTTTCTGGCCGCTGTGTGCCCTATGTCGATGCTGAACAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp GACCCAACGATGTTGTCTGCTAAAAACTTTCCAAAAGTATTGATGCTCAGCTGGGAGGCGGGCACTCACTaGTATTACCTGTGCAGTAGG +
Preference number: 2 (lower is better)
Translates to: DPTMLSAKNFPKVLMLSWEAGTH*YYLCSR
Trigger: CCTACTGCACAGGTAATAGCAGTGAGTGCCCGCCTC...CCAGCTGAGCATCAATACTTTTGGAAAGTTTTTAGCAGACAACATCGTTGGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CCA 90 bp ATTACCTGTGCAGTAGGACACGCCTTTGCAAGTAGCATTAATCGCCTCCTGGCAGTTCTTCATGGGATCTaGGTCAGCTCTTCTTTTCAC +
Preference number: 2 (lower is better)
Translates to: ITCAVGHAFASSINRLLAVLHGI*VSSSFH
Trigger: GTGAAAAGAAGAGCTGACCCAGATCCCATGAAGAAC...TGCCAGGAGGCGATTAATGCTACTTGCAAAGGCGTGTCCTACTGCACAGGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CCA 90 bp GCTATTACCTGTGCAGTAGGACACGCCTTTGCAAGTAGCATTAATCGCCTCCTGGTTCTTCATGGGATCTaGGTCAGCTCTTCTTTTCAC +
Preference number: 2 (lower is better)
Translates to: AITCAVGHAFASSINRLLVLHGI*VSSSFH
Trigger: GTGAAAAGAAGAGCTGACCCAGATCCCATGAAGAAC...CAGGAGGCGATTAATGCTACTTGCAAAGGCGTGTCCTACTGCACAGGTAATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CCA 90 bp CACCTTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGGGACAAACACCTCCATaGCTGTTTGCTCTGGGAGAG +
Preference number: 2 (lower is better)
Translates to: HLTFSKGEGPNHTRTVYLGQTPP*LFALGE
Trigger: CTCTCCCAGAGCAAACAGCCATGGAGGTGTTTGTCC...CAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CCA 90 bp CCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAAGACATATTTCCCTCCCTaGTCCTCATTCGGGGCACAT +
Preference number: 2 (lower is better)
Translates to: PFQKEKGQTTQELFTCRKTYFPP*SSFGAH
Trigger: ATGTGCCCCGAATGAGGACCAGGGAGGGAAATATGT...CTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CCA 90 bp AAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAACACATGACCTTCCTGTCACTGCACTaGACACCTTCCTTCAACGTG +
Preference number: 2 (lower is better)
Translates to: KGQTTQELFTCRKFKHMTFLSLH*TPSFNV
Trigger: CACGTTGAAGGAAGGTGTCCAGTGCAGTGACAGGAA...GGTCATGTGTTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CCA 90 bp GAAGAGCTGAGAACTAAATTAGCACTCTGTTTCTTTGCTGTCAACACGATTCTGCAGTTTTGGAGCTGCTaGCGCCGAAGGGATCACAGG +
Preference number: 2 (lower is better)
Translates to: EELRTKLALCFFAVNTILQFWSC*RRRDHR
Trigger: CCTGTGATCCCTTCGGCGCCAGCAGCTCCAAAACTG...CAGAATCGTGTTGACAGCAAAGAAACAGAGTGCTAATTTAGTTCTCAGCTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR TCA 90 bp CCTGGCACTTCTTCTGGGCAGTCTCAAACTGACAGTTTTTACAGCAAGGACTGTCTTCTTTTCACTCGATaGACAAGCTCTTCAGGTGGT +
Preference number: 2 (lower is better)
Translates to: PGTSSGQSQTDSFYSKDCLLFTR*TSSSGG
Trigger: ACCACCTGAAGAGCTTGTTCATCGAGTGAAAAGAAG...ACAGTCCTTGCTGTAAAAACTGTCAGTTTGAGACTGCCCAGAAGAAGTGCCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000647979.1
ENST00000649227.1
3UTR-3UTR TCA 90 bp GAACCGATGCAGAATCCATGCTGCTCAGCATTTCGACGTTACTGGGGTGAAACATTATGTCCCAATTCATaGGTTGTAACCAGGTCAGCT +
Preference number: 2 (lower is better)
Translates to: EPMQNPCCSAFRRYWGETLCPNS*VVTRSA
Trigger: AGCTGACCTGGTTACAACTCATGAATTGGGACATAA...TGTTTCACCCCAGTAACGTCGAAATGCTGAGCAGCATGGATTCTGCATCGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR TCA 90 bp TTGCAGCAGGTGTCGTTGTTCAGATACATGATGCCAGGATCACACTCTTCTCCTCGTTGTTCAGATACATaGTGCCAGGATCACACTCTT +
Preference number: 2 (lower is better)
Translates to: LQQVSLFRYMMPGSHSSPRCSDT*CQDHTL
Trigger: AAGAGTGTGATCCTGGCATCATGTATCTGAACAACG...AGGAGAAGAGTGTGATCCTGGCATCATGTATCTGAACAACGACACCTGCTGCAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR TCA 90 bp CTGAGAACTAAATTAGCACTCTGTTTCTTTGCTGTCAACACGATTCTGACGCTGATCCTCGTCCATATGTaGGTCTGTGCTGGGGTCTTC +
Preference number: 2 (lower is better)
Translates to: LRTKLALCFFAVNTILTLILVHM*VCAGVF
Trigger: GAAGACCCCAGCACAGACTCACATATGGACGAGGAT...CAGCGTCAGAATCGTGTTGACAGCAAAGAAACAGAGTGCTAATTTAGTTCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp ATCTTCAGCATTTCCTGGAGGCGGGCACTCACTGCTATTACCTGTGCAGTAGGACACACTTTTGGAGACTaGAAACGTGAAACATTCTTG +
Preference number: 2 (lower is better)
Translates to: IFSISWRRALTAITCAVGHTFGD*KRETFL
Trigger: CAAGAATGTTTCACGTTTGCAGTCTCCAAAAGTGTG...TCCTACTGCACAGGTAATAGCAGTGAGTGCCCGCCTCCAGGAAATGCTGAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp CCAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAACACATGACCAGCATACCTCCATGGCTGTTTaGTCTGGGAGAGCCAACATA +
Preference number: 2 (lower is better)
Translates to: PNHTRTVYLQEVQTHDQHTSMAV*SGRANI
Trigger: TATGTTGGCTCTCCCAGAGCAAACAGCCATGGAGGT...ATGCTGGTCATGTGTTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp GGTCCTTCTCAAACCCATCCTCGTCCATATGTGAGTCTGTGCTGGGGTCTTCCTTCCCACAAACTTTATTaGTGCGTTCTTGAAAACACT +
Preference number: 2 (lower is better)
Translates to: GPSQTHPRPYVSLCWGLPSHKLY*CVLENT
Trigger: AGTGTTTTCAAGAACGCAGCAATAAAGTTTGTGGGA...AGGAAGACCCCAGCACAGACTCACATATGGACGAGGATGGGTTTGAGAAGGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp AAGGGGTCCTTCTCAAACCCATCCTCGTCCATATGTGAGTCTGTGCTGGGGTCTCTCGTTTCTCACATTTaGCATTCATGTCACAAAATC +
Preference number: 2 (lower is better)
Translates to: KGSFSNPSSSICESVLGSLVSHI*HSCHKI
Trigger: GATTTTGTGACATGAATGGCAAATGTGAGAAACGAG...AGACCCCAGCACAGACTCACATATGGACGAGGATGGGTTTGAGAAGGACCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp ACACTTAAGTCAGAAGAGCTGAGAACTAAATTAGCACTCTGTTTCTTTGCTGTCGTCCAGTTTTGGAGCTaGTGGCGCCGAAGGGATCAC +
Preference number: 2 (lower is better)
Translates to: TLKSEELRTKLALCFFAVVQFWS*WRRRDH
Trigger: GTGATCCCTTCGGCGCCAGCAGCTCCAAAACTGGAC...GACAGCAAAGAAACAGAGTGCTAATTTAGTTCTCAGCTCTTCTGACTTAAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp GCTGTCAACACGATTCTGACGCTGCAGTTTAAAGGAGGCAGCCTTTTCACTTCTCCAGTGAAGAAGTCCTaGCATTTTACAGTGTACTCG +
Preference number: 2 (lower is better)
Translates to: AVNTILTLQFKGGSLFTSPVKKS*HFTVYS
Trigger: CGAGTACACTGTAAAATGGCAGGACTTCTTCACTGG...AGAAGTGAAAAGGCTGCCTCCTTTAAACTGCAGCGTCAGAATCGTGTTGACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CCA 90 bp TGCTGCGTTCTTGAAAACACTCCTGGGCCTTACTTTCAATGGTCTTATAGATTGGGACAAACACCTCCATaGCTGTTTGCTCTGGGAGAG +
Preference number: 2 (lower is better)
Translates to: CCVLENTPGPYFQWSYRLGQTPP*LFALGE
Trigger: CTCTCCCAGAGCAAACAGCCATGGAGGTGTTTGTCC...CAATCTATAAGACCATTGAAAGTAAGGCCCAGGAGTGTTTTCAAGAACGCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CCA 90 bp GTTCCCTCTCGCAGAAAGGGATGCATTTCCCATCCTTACACTTGCCAAGATCCAGCTATAATAAGCCTTTaGACAAACACCTCCATGGCT +
Preference number: 2 (lower is better)
Translates to: VPSRRKGCISHPYTCQDPAIISL*TNTSMA
Trigger: AGCCATGGAGGTGTTTGTCCAAAGGCTTATTATAGC...TGGATCTTGGCAAGTGTAAGGATGGGAAATGCATCCCTTTCTGCGAGAGGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CCA 90 bp CCCTGGTCCTCATTCGGGGCACATTCTGCTAGACCATCCGGATCATGTTCTGCTGGGCCTTACTTTCAATaGTCTTATAGATTGATTGTT +
Preference number: 2 (lower is better)
Translates to: PWSSFGAHSARPSGSCSAGPYFQ*SYRLIV
Trigger: AACAATCAATCTATAAGACCATTGAAAGTAAGGCCC...AGCAGAACATGATCCGGATGGTCTAGCAGAATGTGCCCCGAATGAGGACCAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CCA 90 bp AACCCATCCTCGTCCATATGTGAGTCTGTGCTGGGGTCTTCCTGGATGGTGTCCGGGCCTTACTTTCAATaGTCTTATAGATTGATTGTT +
Preference number: 2 (lower is better)
Translates to: NPSSSICESVLGSSWMVSGPYFQ*SYRLIV
Trigger: AACAATCAATCTATAAGACCATTGAAAGTAAGGCCC...GGACACCATCCAGGAAGACCCCAGCACAGACTCACATATGGACGAGGATGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CCA 90 bp CAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAACACATGACCAGCATCTTCCTGTCACTGCACTaGACACCTTCCTTCAACGTG +
Preference number: 2 (lower is better)
Translates to: QTTQELFTCRKFKHMTSIFLSLH*TPSFNV
Trigger: CACGTTGAAGGAAGGTGTCCAGTGCAGTGACAGGAA...GATGCTGGTCATGTGTTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CCA 90 bp ACCTTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCTATGTGAGTCTGTGCTaGGGTCTTCCTGGATGGTGT +
Preference number: 2 (lower is better)
Translates to: TLPFQKEKGQTTQELFTCYVSLC*GLPGWC
Trigger: ACACCATCCAGGAAGACCCCAGCACAGACTCACATA...GCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CCA 90 bp GAACCGATGCAGAATCCATGCTGCTCAGCATTTCGACGTTACTGGGGTGAAACATCATCATCTCTTATGTaGGCTAGAACCCTAGAGTCA +
Preference number: 2 (lower is better)
Translates to: EPMQNPCCSAFRRYWGETSSSLM*ARTLES
Trigger: TGACTCTAGGGTTCTAGCCCACATAAGAGATGATGA...TGTTTCACCCCAGTAACGTCGAAATGCTGAGCAGCATGGATTCTGCATCGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649227.1
ENST00000650116.1
3UTR CAA 90 bp CAACTGGGCTATAATAAGCCTTTGGACAAACACCTCCATGGCTGTTaGCTCTGGGAGAGCCAACATAAGCTAATCCAAGAGTTCCCATAT +
Preference number: 2 (lower is better)
Translates to: QLGYNKPLDKHLHGC*LWESQHKLIQEFPY
Trigger: ATATGGGAACTCTTGGATTAGCTTATGTTGGCTCTCCCAGAGCAAACAGCCATGGAGGTGTTTGTCCAAAGGCTTATTATAGCCCAGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR TCA 90 bp AAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAACACATGACCGGAAGTTCAAACACATaGCCAGCATCTGCTAAGTCA +
Preference number: 2 (lower is better)
Translates to: KGQTTQELFTCRKFKHMTGSSNT*PASAKS
Trigger: TGACTTAGCAGATGCTGGTCATGTGTTTGAACTTCC...GGTCATGTGTTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR TCA 90 bp CAAGCAAACAGTGTCATCTTCAGCATTTCCTGGAGGCGGGCACTCACTGCTATTCAAAATCTTGGTATGTaGAAAGGTGTGCCAAGCAAA +
Preference number: 2 (lower is better)
Translates to: QANSVIFSISWRRALTAIQNLGM*KGVPSK
Trigger: TTTGCTTGGCACACCTTTTCACATACCAAGATTTTG...AATAGCAGTGAGTGCCCGCCTCCAGGAAATGCTGAAGATGACACTGTTTGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR TCA 90 bp ACTGTTTACCTGCAGGAAGTTCAAACACATGACCAGCATCTGCTAAGTCACTTCCTGTCAACACGATTCTaGCGCTGCAGTTTAAAGGAG +
Preference number: 2 (lower is better)
Translates to: TVYLQEVQTHDQHLLSHFLSTRF*RCSLKE
Trigger: CTCCTTTAAACTGCAGCGTCAGAATCGTGTTGACAG...GAAGTGACTTAGCAGATGCTGGTCATGTGTTTGAACTTCCTGCAGGTAAACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR TCA 90 bp TACCTCTTGTGGAGACTTGAGAATGCGAATCTGCTCTATCTGTATTCCATAGCCCAACCACGTGTCCAGTaGAGAAGTCCTGCCATTTTA +
Preference number: 2 (lower is better)
Translates to: YLLWRLENANLLYLYSIAQPRVQ*RSPAIL
Trigger: TAAAATGGCAGGACTTCTTCACTGGACACGTGGTTG...GGCTATGGAATACAGATAGAGCAGATTCGCATTCTCAAGTCTCCACAAGAGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp AGGACTGTTCCTGTCACTGCACTGGACACCTTCCTTCAACGTGCAGTCGCTGTTGTCATCACAAATAAATaGCAAATGCCTCATATTCAG +
Preference number: 2 (lower is better)
Translates to: RTVPVTALDTFLQRAVAVVITNK*QMPHIQ
Trigger: CTGAATATGAGGCATTTGGCATTTATTTGTGATGAC...AACAGCGACTGCACGTTGAAGGAAGGTGTCCAGTGCAGTGACAGGAACAGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647979.1
ENST00000649227.1
3UTR-3UTR GCA 90 bp CTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAAGTCCTTCACACAGTAAATaGAGCCCATCCAGAATCCTG +
Preference number: 2 (lower is better)
Translates to: LFKRRRAKPHKNCLPAGSPSHSK*SPSRIL
Trigger: CAGGATTCTGGATGGGCTGCATTTACTGTGTGAAGG...ACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310823.8
3UTR-3UTR GCA 90 bp GAACCGATGCAGAATCCATGCTGCTCAGCATTTCGACGTTACTGGGGTGAAACACACACTTTTGGAGACTaGAAACGTGAAACATTCTTG +
Preference number: 2 (lower is better)
Translates to: EPMQNPCCSAFRRYWGETHTFGD*KRETFL
Trigger: CAAGAATGTTTCACGTTTGCAGTCTCCAAAAGTGTG...TGTTTCACCCCAGTAACGTCGAAATGCTGAGCAGCATGGATTCTGCATCGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp ACTGGACACCTTCCTTCAACGTGCAGTCGCTGTTGCAGCAGGTGTCGTTGTTCAATTTGGGTAACTTTTTaGCATGTTGTAGTGCTTTTC +
Preference number: 2 (lower is better)
Translates to: TGHLPSTCSRCCSRCRCSIWVTF*HVVVLF
Trigger: GAAAAGCACTACAACATGGCAAAAAGTTACCCAAAT...TGAACAACGACACCTGCTGCAACAGCGACTGCACGTTGAAGGAAGGTGTCCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp TCTCAAACCCATCCTCGTCCATATGTGAGTCTGTGCTGGGGTCTTCCTGGATGGCAAGCAAACTTTAGATaGTTCCTCAGCTATATCAAA +
Preference number: 2 (lower is better)
Translates to: SQTHPRPYVSLCWGLPGWQANFR*FLSYIK
Trigger: TTTGATATAGCTGAGGAAGCATCTAAAGTTTGCTTG...CCATCCAGGAAGACCCCAGCACAGACTCACATATGGACGAGGATGGGTTTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp GAACCGATGCAGAATCCATGCTGCTCAGCATTTCGACGTTACTGGGGTGAAACAGTATGTGAAAAGGTGTaGCAAGCAAACTTTAGATGC +
Preference number: 2 (lower is better)
Translates to: EPMQNPCCSAFRRYWGETVCEKV*QANFRC
Trigger: GCATCTAAAGTTTGCTTGGCACACCTTTTCACATAC...TGTTTCACCCCAGTAACGTCGAAATGCTGAGCAGCATGGATTCTGCATCGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp AGGACTCCAGCTGCTGTTCCCTCTCGCAGAAAGGGATGCATTTCCCATCCTTACTACCATAATTCTTTGTaGTCGTCAAACCACTATTCA +
Preference number: 2 (lower is better)
Translates to: RTPAAVPSRRKGCISHPYYHNSL*SSNHYS
Trigger: TGAATAGTGGTTTGACGAGCACAAAGAATTATGGTA...GTAAGGATGGGAAATGCATCCCTTTCTGCGAGAGGGAACAGCAGCTGGAGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp GACCCAACGATGTTGTCTGCTAAAAACTTTCCAAAAGTATTGATGCTCAGCTGGGACTGTTCCTGTCACTaGACTGGACACCTTCCTTCA +
Preference number: 2 (lower is better)
Translates to: DPTMLSAKNFPKVLMLSWDCSCH*TGHLPS
Trigger: TGAAGGAAGGTGTCCAGTGCAGTGACAGGAACAGTC...CCAGCTGAGCATCAATACTTTTGGAAAGTTTTTAGCAGACAACATCGTTGGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp CACCTTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGGATAATGCGAACCGATaGAGAATCCATGCTGCTCAG +
Preference number: 2 (lower is better)
Translates to: HLTFSKGEGPNHTRTVYLDNANR*RIHAAQ
Trigger: CTGAGCAGCATGGATTCTGCATCGGTTCGCATTATC...CAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CCA 90 bp ACTTCTTCTGGGCAGTCTCAAACTGACAGTTTTTACAGCAAGGACTGTTCCTGTTACACGTGTTCTTCATaGGATCTGGGTCAGCTCTTC +
Preference number: 2 (lower is better)
Translates to: TSSGQSQTDSFYSKDCSCYTCSS*DLGQLF
Trigger: GAAGAGCTGACCCAGATCCCATGAAGAACACGTGTA...ACAGGAACAGTCCTTGCTGTAAAAACTGTCAGTTTGAGACTGCCCAGAAGAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CCA 90 bp ACCTTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCCATGGCTGTTTGCTCTaGGAGAGCCAACATAAGCTA +
Preference number: 2 (lower is better)
Translates to: TLPFQKEKGQTTQELFTCHGCLL*ESQHKL
Trigger: TAGCTTATGTTGGCTCTCCCAGAGCAAACAGCCATG...GCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CCA 90 bp GATCCAAGCAAACAGTGTCATCTTCAGCATTTCCTGGAGGCGGGCACTCACTGCGGGCCTTACTTTCAATaGTCTTATAGATTGATTGTT +
Preference number: 2 (lower is better)
Translates to: DPSKQCHLQHFLEAGTHCGPYFQ*SYRLIV
Trigger: AACAATCAATCTATAAGACCATTGAAAGTAAGGCCC...GCAGTGAGTGCCCGCCTCCAGGAAATGCTGAAGATGACACTGTTTGCTTGGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR TCA 90 bp CTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAAGTGGAAGTTCAAACACATaGCCAGCATCTGCTAAGTCA +
Preference number: 2 (lower is better)
Translates to: LFKRRRAKPHKNCLPAGSGSSNT*PASAKS
Trigger: TGACTTAGCAGATGCTGGTCATGTGTTTGAACTTCC...ACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR TCA 90 bp GCTGTCAACACGATTCTGACGCTGCAGTTTAAAGGAGGCAGCCTTTTCACTTCTTGGAGACTGCAAACGTaGAACATTCTTGATATCTTC +
Preference number: 2 (lower is better)
Translates to: AVNTILTLQFKGGSLFTSWRLQT*NILDIF
Trigger: GAAGATATCAAGAATGTTTCACGTTTGCAGTCTCCA...AGAAGTGAAAAGGCTGCCTCCTTTAAACTGCAGCGTCAGAATCGTGTTGACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR TCA 90 bp ACTTCTTCTGGGCAGTCTCAAACTGACAGTTTTTACAGCAAGGACTGTTCCTGTTTATTGCTGCGTTCTTaGAAACACTCCTGGGCCTTA +
Preference number: 2 (lower is better)
Translates to: TSSGQSQTDSFYSKDCSCLLLRS*KHSWAL
Trigger: TAAGGCCCAGGAGTGTTTTCAAGAACGCAGCAATAA...ACAGGAACAGTCCTTGCTGTAAAAACTGTCAGTTTGAGACTGCCCAGAAGAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR TCA 90 bp TCACCTTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTTCGACGTTACTGGGGTaGAACAGAGACAGAGATTCA +
Preference number: 2 (lower is better)
Translates to: SPYLFKRRRAKPHKNCLPSTLLG*NRDRDS
Trigger: TGAATCTCTGTCTCTGTTTCACCCCAGTAACGTCGA...AGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAAGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR TCA 90 bp GCTATTACCTGTGCAGTAGGACACGCCTTTGCAAGTAGCATTAATCGCCTCCTGGAACAAGCTCTAATATaGATTTGTATGCACTTCAGG +
Preference number: 2 (lower is better)
Translates to: AITCAVGHAFASSINRLLEQALI*ICMHFR
Trigger: CCTGAAGTGCATACAAATTCATATTAGAGCTTGTTC...CAGGAGGCGATTAATGCTACTTGCAAAGGCGTGTCCTACTGCACAGGTAATAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647610.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp ATTGTTCTCGTGATCGCCACTCACAGCTATGGGATACATGACATATTTCCCTCCTCCAGCTGTATTTTCTaGTTTTGCACCACAGGTCAA +
Preference number: 2 (lower is better)
Translates to: IVLVIATHSYGIHDIFPSSSCIF*FCTTGQ
Trigger: TTGACCTGTGGTGCAAAAGCAGAAAATACAGCTGGA...GGAGGGAAATATGTCATGTATCCCATAGCTGTGAGTGGCGATCACGAGAACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp GCTGCTGTTCCCTCTCGCAGAAAGGGATGCATTTCCCATCCTTACACTTGCCAAGTCATCACAAATAAATaGCAAATGCCTCATATTCAG +
Preference number: 2 (lower is better)
Translates to: AAVPSRRKGCISHPYTCQVITNK*QMPHIQ
Trigger: CTGAATATGAGGCATTTGGCATTTATTTGTGATGAC...TTGGCAAGTGTAAGGATGGGAAATGCATCCCTTTCTGCGAGAGGGAACAGCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647979.1
ENST00000649227.1
3UTR-3UTR GCA 90 bp ATTGCTGCGTTCTTGAAAACACTCCTGGGCCTTACTTTCAATGGTCTTATAGATACCTCCATGGCTGTTTaGTCTGGGAGAGCCAACATA +
Preference number: 2 (lower is better)
Translates to: IAAFLKTLLGLTFNGLIDTSMAV*SGRANI
Trigger: TATGTTGGCTCTCCCAGAGCAAACAGCCATGGAGGT...ATCTATAAGACCATTGAAAGTAAGGCCCAGGAGTGTTTTCAAGAACGCAGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp CAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAACACATGACCAGCATCTCTCGCAGAAAGGGATaGATTTCCCATCCTTACACT +
Preference number: 2 (lower is better)
Translates to: QTTQELFTCRKFKHMTSISRRKG*ISHPYT
Trigger: AGTGTAAGGATGGGAAATGCATCCCTTTCTGCGAGA...GATGCTGGTCATGTGTTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp GACCCAACGATGTTGTCTGCTAAAAACTTTCCAAAAGTATTGATGCTCAGCTGGGTCAGTTTCATTACATaGACAGGACTCCAGCTGCTG +
Preference number: 2 (lower is better)
Translates to: DPTMLSAKNFPKVLMLSWVSFIT*TGLQLL
Trigger: CAGCAGCTGGAGTCCTGTGCATGTAATGAAACTGAC...CCAGCTGAGCATCAATACTTTTGGAAAGTTTTTAGCAGACAACATCGTTGGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp ACACTTAAGTCAGAAGAGCTGAGAACTAAATTAGCACTCTGTTTCTTTGCTGTCCCATATGTGAGTCTGTaGTGGGGTCTTCCTGGATGG +
Preference number: 2 (lower is better)
Translates to: TLKSEELRTKLALCFFAVPYVSL*WGLPGW
Trigger: CCATCCAGGAAGACCCCAGCACAGACTCACATATGG...GACAGCAAAGAAACAGAGTGCTAATTTAGTTCTCAGCTCTTCTGACTTAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CCA 90 bp TGCCATGTTGTAGTGCTTTTCACCAGGTTTTACCTCTTGTGGAGACTTGAGAATTACACGTGTTCTTCATaGGATCTGGGTCAGCTCTTC +
Preference number: 2 (lower is better)
Translates to: CHVVVLFTRFYLLWRLENYTCSS*DLGQLF
Trigger: GAAGAGCTGACCCAGATCCCATGAAGAACACGTGTA...ATTCTCAAGTCTCCACAAGAGGTAAAACCTGGTGAAAAGCACTACAACATGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CCA 90 bp CATCCACCCTCGAGTTCCCACAAACTTTATTGCTGCGTTCTTGAAAACACTCCTTCATCATCTCTTATGTaGGCTAGAACCCTAGAGTCA +
Preference number: 2 (lower is better)
Translates to: HPPSSSHKLYCCVLENTPSSSLM*ARTLES
Trigger: TGACTCTAGGGTTCTAGCCCACATAAGAGATGATGA...AGGAGTGTTTTCAAGAACGCAGCAATAAAGTTTGTGGGAACTCGAGGGTGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR TCA 90 bp TGCTGCGTTCTTGAAAACACTCCTGGGCCTTACTTTCAATGGTCTTATAGATTGGGAAGTTCAAACACATaGCCAGCATCTGCTAAGTCA +
Preference number: 2 (lower is better)
Translates to: CCVLENTPGPYFQWSYRLGSSNT*PASAKS
Trigger: TGACTTAGCAGATGCTGGTCATGTGTTTGAACTTCC...CAATCTATAAGACCATTGAAAGTAAGGCCCAGGAGTGTTTTCAAGAACGCAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR TCA 90 bp TCACCTTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTTGGGCAGTCTCAAACTaGCAGTTTTTACAGCAAGGA +
Preference number: 2 (lower is better)
Translates to: SPYLFKRRRAKPHKNCLPWAVSN*QFLQQG
Trigger: TCCTTGCTGTAAAAACTGTCAGTTTGAGACTGCCCA...AGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAAGGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR TCA 90 bp CACCTTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGTGCTCAGCTGGTCAATaGAATCCCAAAATCGTTCAA +
Preference number: 2 (lower is better)
Translates to: HLTFSKGEGPNHTRTVYLCSAGQ*NPKIVQ
Trigger: TTGAACGATTTTGGGATTTCATTGACCAGCTGAGCA...CAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp CTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCCAGCTGTATTTTCTaGTTTTGCACCACAGGTCAA +
Preference number: 2 (lower is better)
Translates to: LFKRRRAKPHKNCLPAGSSSCIF*FCTTGQ
Trigger: TTGACCTGTGGTGCAAAAGCAGAAAATACAGCTGGA...ACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp TACCTCTTGTGGAGACTTGAGAATGCGAATCTGCTCTATCTGTATTCCATAGCCTCCAGCTGTATTTTCTaGTTTTGCACCACAGGTCAA +
Preference number: 2 (lower is better)
Translates to: YLLWRLENANLLYLYSIASSCIF*FCTTGQ
Trigger: TTGACCTGTGGTGCAAAAGCAGAAAATACAGCTGGA...GGCTATGGAATACAGATAGAGCAGATTCGCATTCTCAAGTCTCCACAAGAGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp ACTGTTTACCTGCAGGAAGTTCAAACACATGACCAGCATCTGCTAAGTCACTTCAAAATACAGAAAAACTaGCCAGCAAATCAGGGCCCT +
Preference number: 2 (lower is better)
Translates to: TVYLQEVQTHDQHLLSHFKIQKN*PANQGP
Trigger: AGGGCCCTGATTTGCTGGGCAGTTTTTCTGTATTTT...GAAGTGACTTAGCAGATGCTGGTCATGTGTTTGAACTTCCTGCAGGTAAACAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310823.8
ENST00000649227.1
3UTR-3UTR GCA 90 bp CAGAATCCATGCTGCTCAGCATTTCGACGTTACTGGGGTGAAACAGAGACAGAGCAAGCAAACTTTAGATaGTTCCTCAGCTATATCAAA +
Preference number: 2 (lower is better)
Translates to: QNPCCSAFRRYWGETETEQANFR*FLSYIK
Trigger: TTTGATATAGCTGAGGAAGCATCTAAAGTTTGCTTG...CTCTGTCTCTGTTTCACCCCAGTAACGTCGAAATGCTGAGCAGCATGGATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp GGAAAGGGTTTGATAATGCGAACCGATGCAGAATCCATGCTGCTCAGCATTTCGCACAAACTTTATTGCTaGGTTCTTGAAAACACTCCT +
Preference number: 2 (lower is better)
Translates to: GKGLIMRTDAESMLLSISHKLYC*VLENTP
Trigger: AGGAGTGTTTTCAAGAACGCAGCAATAAAGTTTGTG...CGAAATGCTGAGCAGCATGGATTCTGCATCGGTTCGCATTATCAAACCCTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp GGAAAGGGTTTGATAATGCGAACCGATGCAGAATCCATGCTGCTCAGCATTTCGTCCCACAAACTTTATTaGTGCGTTCTTGAAAACACT +
Preference number: 2 (lower is better)
Translates to: GKGLIMRTDAESMLLSISSHKLY*CVLENT
Trigger: AGTGTTTTCAAGAACGCAGCAATAAAGTTTGTGGGA...CGAAATGCTGAGCAGCATGGATTCTGCATCGGTTCGCATTATCAAACCCTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp GTCAATGAAATCCCAAAATCGTTCAATTACATCCTGTACTCGTTTCTCACATTTGAGGCGGGCACTCACTaGTATTACCTGTGCAGTAGG +
Preference number: 2 (lower is better)
Translates to: VNEIPKSFNYILYSFLTFEAGTH*YYLCSR
Trigger: CCTACTGCACAGGTAATAGCAGTGAGTGCCCGCCTC...AAATGTGAGAAACGAGTACAGGATGTAATTGAACGATTTTGGGATTTCATTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp TCACCTTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTTCCCATCCTTACACTTaGCAAGATCCAAGCAAACAG +
Preference number: 2 (lower is better)
Translates to: SPYLFKRRRAKPHKNCLPSHPYT*QDPSKQ
Trigger: CTGTTTGCTTGGATCTTGGCAAGTGTAAGGATGGGA...AGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAAGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CCA 90 bp ACTGTTTACCTGCAGGAAGTTCAAACACATGACCAGCATCTGCTAAGTCACTTCGCCCATCCAGAATCCTaGAGCAATAAAGTAAGAAGT +
Preference number: 2 (lower is better)
Translates to: TVYLQEVQTHDQHLLSHFAHPES*SNKVRS
Trigger: ACTTCTTACTTTATTGCTCCAGGATTCTGGATGGGC...GAAGTGACTTAGCAGATGCTGGTCATGTGTTTGAACTTCCTGCAGGTAAACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310823.8
3UTR-3UTR CCA 90 bp TGCACACTTAAGTCAGAAGAGCTGAGAACTAAATTAGCACTCTGTTTCTTTGCTACATATTTCCCTCCCTaGTCCTCATTCGGGGCACAT +
Preference number: 2 (lower is better)
Translates to: CTLKSEELRTKLALCFFATYFPP*SSFGAH
Trigger: ATGTGCCCCGAATGAGGACCAGGGAGGGAAATATGT...AGCAAAGAAACAGAGTGCTAATTTAGTTCTCAGCTCTTCTGACTTAAGTGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CCA 90 bp GAAGAGCTGAGAACTAAATTAGCACTCTGTTTCTTTGCTGTCAACACGATTCTGATGGTGTCCATTCTCTaGTGGTCCAGTTTTGGAGCT +
Preference number: 2 (lower is better)
Translates to: EELRTKLALCFFAVNTILMVSIL*WSSFGA
Trigger: AGCTCCAAAACTGGACCACCAGAGAATGGACACCAT...CAGAATCGTGTTGACAGCAAAGAAACAGAGTGCTAATTTAGTTCTCAGCTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CCA 90 bp TCACCTTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGATCCTCAAATGACTTaGCAGCTGTGCTGCTATTTG +
Preference number: 2 (lower is better)
Translates to: SPYLFKRRRAKPHKNCLPDPQMT*QLCCYL
Trigger: CAAATAGCAGCACAGCTGCCAAGTCATTTGAGGATC...AGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAAGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR TCA 90 bp ATTGCTGCGTTCTTGAAAACACTCCTGGGCCTTACTTTCAATGGTCTTATAGATCTTCTTTTCACTCGATaGACAAGCTCTTCAGGTGGT +
Preference number: 2 (lower is better)
Translates to: IAAFLKTLLGLTFNGLIDLLFTR*TSSSGG
Trigger: ACCACCTGAAGAGCTTGTTCATCGAGTGAAAAGAAG...ATCTATAAGACCATTGAAAGTAAGGCCCAGGAGTGTTTTCAAGAACGCAGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647979.1
ENST00000649227.1
3UTR-3UTR TCA 90 bp ATTGCTGCGTTCTTGAAAACACTCCTGGGCCTTACTTTCAATGGTCTTATAGATTGGGCAGTCTCAAACTaGCAGTTTTTACAGCAAGGA +
Preference number: 2 (lower is better)
Translates to: IAAFLKTLLGLTFNGLIDWAVSN*QFLQQG
Trigger: TCCTTGCTGTAAAAACTGTCAGTTTGAGACTGCCCA...ATCTATAAGACCATTGAAAGTAAGGCCCAGGAGTGTTTTCAAGAACGCAGCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR TCA 90 bp CACAAACTTTATTGCTGCGTTCTTGAAAACACTCCTGGGCCTTACTTTCAATGGCCACCACCACGACCTTaGAATTTTGTGAAAAACGTT +
Preference number: 2 (lower is better)
Translates to: HKLYCCVLENTPGPYFQWPPPRP*NFVKNV
Trigger: AACGTTTTTCACAAAATTTCAAGGTCGTGGTGGTGG...CCATTGAAAGTAAGGCCCAGGAGTGTTTTCAAGAACGCAGCAATAAAGTTTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp CCTGGCACTTCTTCTGGGCAGTCTCAAACTGACAGTTTTTACAGCAAGGACTGTATTTGGGTAACTTTTTaGCATGTTGTAGTGCTTTTC +
Preference number: 2 (lower is better)
Translates to: PGTSSGQSQTDSFYSKDCIWVTF*HVVVLF
Trigger: GAAAAGCACTACAACATGGCAAAAAGTTACCCAAAT...ACAGTCCTTGCTGTAAAAACTGTCAGTTTGAGACTGCCCAGAAGAAGTGCCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp CCTGGCACTTCTTCTGGGCAGTCTCAAACTGACAGTTTTTACAGCAAGGACTGTCAAGCAAACTTTAGATaGTTCCTCAGCTATATCAAA +
Preference number: 2 (lower is better)
Translates to: PGTSSGQSQTDSFYSKDCQANFR*FLSYIK
Trigger: TTTGATATAGCTGAGGAAGCATCTAAAGTTTGCTTG...ACAGTCCTTGCTGTAAAAACTGTCAGTTTGAGACTGCCCAGAAGAAGTGCCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR TCA 90 bp GCTCCCATTAGTAAGTGTGAGATAAAGAAGGAAACCATGCTCAGCTCAGAGTTTATGAAACTAGTGACATaGATGTCTTTGGGGAAAGGA +
Preference number: 2 (lower is better)
Translates to: APISKCEIKKETMLSSEFMKLVT*MSLGKG
Trigger: TCCTTTCCCCAAAGACATTCATGTCACTAGTTTCAT...AAACTCTGAGCTGAGCATGGTTTCCTTCTTTATCTCACACTTACTAATGGGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618923.2
3UTR-3UTR TCA 90 bp CACAAACTTTATTGCTGCGTTCTTGAAAACACTCCTGGGCCTTACTTTCAATGGTGGAGACTGCAAACGTaGAACATTCTTGATATCTTC +
Preference number: 2 (lower is better)
Translates to: HKLYCCVLENTPGPYFQWWRLQT*NILDIF
Trigger: GAAGATATCAAGAATGTTTCACGTTTGCAGTCTCCA...CCATTGAAAGTAAGGCCCAGGAGTGTTTTCAAGAACGCAGCAATAAAGTTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR TCA 90 bp CACAAACTTTATTGCTGCGTTCTTGAAAACACTCCTGGGCCTTACTTTCAATGGCAAAATCTTGGTATGTaGAAAGGTGTGCCAAGCAAA +
Preference number: 2 (lower is better)
Translates to: HKLYCCVLENTPGPYFQWQNLGM*KGVPSK
Trigger: TTTGCTTGGCACACCTTTTCACATACCAAGATTTTG...CCATTGAAAGTAAGGCCCAGGAGTGTTTTCAAGAACGCAGCAATAAAGTTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp CCAATAATTTACACGTGTTCTTCATGGGATCTGGGTCAGCTCTTCTTTTCACTCCACACTTTTGGAGACTaGAAACGTGAAACATTCTTG +
Preference number: 2 (lower is better)
Translates to: PIIYTCSSWDLGQLFFSLHTFGD*KRETFL
Trigger: CAAGAATGTTTCACGTTTGCAGTCTCCAAAAGTGTG...GAGTGAAAAGAAGAGCTGACCCAGATCCCATGAAGAACACGTGTAAATTATTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp AAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAACACATGACCCAAGCAAACTTTAGATaGTTCCTCAGCTATATCAAA +
Preference number: 2 (lower is better)
Translates to: KGQTTQELFTCRKFKHMTQANFR*FLSYIK
Trigger: TTTGATATAGCTGAGGAAGCATCTAAAGTTTGCTTG...GGTCATGTGTTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp CACAAACTTTATTGCTGCGTTCTTGAAAACACTCCTGGGCCTTACTTTCAATGGGTATGTGAAAAGGTGTaGCAAGCAAACTTTAGATGC +
Preference number: 2 (lower is better)
Translates to: HKLYCCVLENTPGPYFQWVCEKV*QANFRC
Trigger: GCATCTAAAGTTTGCTTGGCACACCTTTTCACATAC...CCATTGAAAGTAAGGCCCAGGAGTGTTTTCAAGAACGCAGCAATAAAGTTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp CTGAGAACTAAATTAGCACTCTGTTTCTTTGCTGTCAACACGATTCTGACGCTGATCCGGATCATGTTCTaGTCCAAAATTATGTCCCAA +
Preference number: 2 (lower is better)
Translates to: LRTKLALCFFAVNTILTLIRIMF*SKIMSQ
Trigger: TTGGGACATAATTTTGGAGCAGAACATGATCCGGAT...CAGCGTCAGAATCGTGTTGACAGCAAAGAAACAGAGTGCTAATTTAGTTCTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp CACCTTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCACAAACTTTATTGCTaGGTTCTTGAAAACACTCCT +
Preference number: 2 (lower is better)
Translates to: HLTFSKGEGPNHTRTVYLHKLYC*VLENTP
Trigger: AGGAGTGTTTTCAAGAACGCAGCAATAAAGTTTGTG...CAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAAGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp CCAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAACACATGACCAGCATCACAAACTTTATTGCTaGGTTCTTGAAAACACTCCT +
Preference number: 2 (lower is better)
Translates to: PNHTRTVYLQEVQTHDQHHKLYC*VLENTP
Trigger: AGGAGTGTTTTCAAGAACGCAGCAATAAAGTTTGTG...ATGCTGGTCATGTGTTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp ACCTTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCTCCCACAAACTTTATTaGTGCGTTCTTGAAAACACT +
Preference number: 2 (lower is better)
Translates to: TLPFQKEKGQTTQELFTCSHKLY*CVLENT
Trigger: AGTGTTTTCAAGAACGCAGCAATAAAGTTTGTGGGA...GCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp ACACTTAAGTCAGAAGAGCTGAGAACTAAATTAGCACTCTGTTTCTTTGCTGTCTCCCATCCTTACACTTaGCAAGATCCAAGCAAACAG +
Preference number: 2 (lower is better)
Translates to: TLKSEELRTKLALCFFAVSHPYT*QDPSKQ
Trigger: CTGTTTGCTTGGATCTTGGCAAGTGTAAGGATGGGA...GACAGCAAAGAAACAGAGTGCTAATTTAGTTCTCAGCTCTTCTGACTTAAGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CCA 90 bp GCAGGTAGTATTCTATCTCCTGGCTGGCTCATCACATTCAAAACAACCTGTTTTTTCCATAAATTCAACTaGCTACCATGTATAGCCCTC +
Preference number: 2 (lower is better)
Translates to: AGSILSPGWLITFKTTCFFHKFN*LPCIAL
Trigger: GAGGGCTATACATGGTAGCCAGTTGAATTTATGGAA...AAAACAGGTTGTTTTGAATGTGATGAGCCAGCCAGGAGATAGAATACTACCTGC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000310823.8
3UTR-3UTR CCA 90 bp CCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAAGTCAAATATCTGCTTGTaGGTCAATAAAAAGGGTTTC +
Preference number: 2 (lower is better)
Translates to: PFQKEKGQTTQELFTCRKSNICL*VNKKGF
Trigger: GAAACCCTTTTTATTGACCCACAAGCAGATATTTGA...CTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310823.8
3UTR-3UTR CCA 90 bp ACTGTTTACCTGCAGGAAGTTCAAACACATGACCAGCATCTGCTAAGTCACTTCGTATTGATGCTCAGCTaGTCAATGAAATCCCAAAAT +
Preference number: 2 (lower is better)
Translates to: TVYLQEVQTHDQHLLSHFVLMLS*SMKSQN
Trigger: ATTTTGGGATTTCATTGACCAGCTGAGCATCAATAC...GAAGTGACTTAGCAGATGCTGGTCATGTGTTTGAACTTCCTGCAGGTAAACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR TCA 90 bp GAAGAGCTGAGAACTAAATTAGCACTCTGTTTCTTTGCTGTCAACACGATTCTGTGGAGACTGCAAACGTaGAACATTCTTGATATCTTC +
Preference number: 2 (lower is better)
Translates to: EELRTKLALCFFAVNTILWRLQT*NILDIF
Trigger: GAAGATATCAAGAATGTTTCACGTTTGCAGTCTCCA...CAGAATCGTGTTGACAGCAAAGAAACAGAGTGCTAATTTAGTTCTCAGCTCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR TCA 90 bp TGCACACTTAAGTCAGAAGAGCTGAGAACTAAATTAGCACTCTGTTTCTTTGCTTTATGTCCCAATTCATaGGTTGTAACCAGGTCAGCT +
Preference number: 2 (lower is better)
Translates to: CTLKSEELRTKLALCFFALCPNS*VVTRSA
Trigger: AGCTGACCTGGTTACAACTCATGAATTGGGACATAA...AGCAAAGAAACAGAGTGCTAATTTAGTTCTCAGCTCTTCTGACTTAAGTGTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp GCAGGTAGTATTCTATCTCCTGGCTGGCTCATCACATTCAAAACAACCTGTTTTCAAATAAATGCCAAATaGCTCATATTCAGCGGTTCA +
Preference number: 2 (lower is better)
Translates to: AGSILSPGWLITFKTTCFQINAK*LIFSGS
Trigger: TGAACCGCTGAATATGAGGCATTTGGCATTTATTTG...AAAACAGGTTGTTTTGAATGTGATGAGCCAGCCAGGAGATAGAATACTACCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310823.8
3UTR-3UTR GCA 90 bp CAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAACACATGACCAGCATCGTCATCACAAATAAATaGCAAATGCCTCATATTCAG +
Preference number: 2 (lower is better)
Translates to: QTTQELFTCRKFKHMTSIVITNK*QMPHIQ
Trigger: CTGAATATGAGGCATTTGGCATTTATTTGTGATGAC...GATGCTGGTCATGTGTTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310823.8
ENST00000647979.1
ENST00000649227.1
3UTR-3UTR GCA 90 bp GAAGAGCTGAGAACTAAATTAGCACTCTGTTTCTTTGCTGTCAACACGATTCTGGTATGTGAAAAGGTGTaGCAAGCAAACTTTAGATGC +
Preference number: 2 (lower is better)
Translates to: EELRTKLALCFFAVNTILVCEKV*QANFRC
Trigger: GCATCTAAAGTTTGCTTGGCACACCTTTTCACATAC...CAGAATCGTGTTGACAGCAAAGAAACAGAGTGCTAATTTAGTTCTCAGCTCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp ACTTCTTCTGGGCAGTCTCAAACTGACAGTTTTTACAGCAAGGACTGTTCCTGTTACCATAATTCTTTGTaGTCGTCAAACCACTATTCA +
Preference number: 2 (lower is better)
Translates to: TSSGQSQTDSFYSKDCSCYHNSL*SSNHYS
Trigger: TGAATAGTGGTTTGACGAGCACAAAGAATTATGGTA...ACAGGAACAGTCCTTGCTGTAAAAACTGTCAGTTTGAGACTGCCCAGAAGAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp TGCACACTTAAGTCAGAAGAGCTGAGAACTAAATTAGCACTCTGTTTCTTTGCTAGCACTCTGTTTCTTTaGTGTCAACACGATTCTGAC +
Preference number: 2 (lower is better)
Translates to: CTLKSEELRTKLALCFFASTLFL*CQHDSD
Trigger: GTCAGAATCGTGTTGACAGCAAAGAAACAGAGTGCT...AGCAAAGAAACAGAGTGCTAATTTAGTTCTCAGCTCTTCTGACTTAAGTGTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp CCTGGGCCTTACTTTCAATGGTCTTATAGATTGATTGTTTACTGCAGTTTGAAAAAAATACAGAAAAACTaGCCAGCAAATCAGGGCCCT +
Preference number: 2 (lower is better)
Translates to: PGPYFQWSYRLIVYCSLKKIQKN*PANQGP
Trigger: AGGGCCCTGATTTGCTGGGCAGTTTTTCTGTATTTT...TTTCAAACTGCAGTAAACAATCAATCTATAAGACCATTGAAAGTAAGGCCCAGG
39% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649227.1
3UTR-3UTR CCA 90 bp GCTCCCATTAGTAAGTGTGAGATAAAGAAGGAAACCATGCTCAGCTCAGAGTTTAGACTTACTTTTCACTaGCTTTTGTACTGTGTACAT +
Preference number: 2 (lower is better)
Translates to: APISKCEIKKETMLSSEFRLTFH*LLYCVH
Trigger: ATGTACACAGTACAAAAGCCAGTGAAAAGTAAGTCT...AAACTCTGAGCTGAGCATGGTTTCCTTCTTTATCTCACACTTACTAATGGGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618923.2
3UTR CAA 90 bp TGTGAAATGAAAAAGCAAGGTGTAAAAGTGTACTGCATAGCACCGTaGTGTCAAATACAGACATATACATACACTATACCTGCATACGAC +
Preference number: 2 (lower is better)
Translates to: CEMKKQGVKVYCIAP*CQIQTYTYTIPAYD
Trigger: GTCGTATGCAGGTATAGTGTATGTATATGTCTGTATTTGACACAACGGTGCTATGCAGTACACTTTTACACCTTGCTTTTTCATTTCACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618923.2
3UTR-3UTR GCA 90 bp TGCACACTTAAGTCAGAAGAGCTGAGAACTAAATTAGCACTCTGTTTCTTTGCTCAAATAAATGCCAAATaGCTCATATTCAGCGGTTCA +
Preference number: 2 (lower is better)
Translates to: CTLKSEELRTKLALCFFAQINAK*LIFSGS
Trigger: TGAACCGCTGAATATGAGGCATTTGGCATTTATTTG...AGCAAAGAAACAGAGTGCTAATTTAGTTCTCAGCTCTTCTGACTTAAGTGTGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647979.1
ENST00000649227.1
3UTR-3UTR CCA 90 bp GTCAATGAAATCCCAAAATCGTTCAATTACATCCTGTACTCGTTTCTCACATTTGCTATAATAAGCCTTTaGACAAACACCTCCATGGCT +
Preference number: 2 (lower is better)
Translates to: VNEIPKSFNYILYSFLTFAIISL*TNTSMA
Trigger: AGCCATGGAGGTGTTTGTCCAAAGGCTTATTATAGC...AAATGTGAGAAACGAGTACAGGATGTAATTGAACGATTTTGGGATTTCATTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CCA 90 bp GAAGAGCTGAGAACTAAATTAGCACTCTGTTTCTTTGCTGTCAACACGATTCTGGGGCCTTACTTTCAATaGTCTTATAGATTGATTGTT +
Preference number: 2 (lower is better)
Translates to: EELRTKLALCFFAVNTILGPYFQ*SYRLIV
Trigger: AACAATCAATCTATAAGACCATTGAAAGTAAGGCCC...CAGAATCGTGTTGACAGCAAAGAAACAGAGTGCTAATTTAGTTCTCAGCTCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR TCA 90 bp AGGAATAAAAGGCTAAGAATAGAGTCTTCTCCTTATACAGGCATTTCAGACAAACTCTCCAACATACTGTaGAATGAAAAAGCAAGGTGT +
Preference number: 2 (lower is better)
Translates to: RNKRLRIESSPYTGISDKLSNIL*NEKARC
Trigger: ACACCTTGCTTTTTCATTTCACAGTATGTTGGAGAG...TTTGTCTGAAATGCCTGTATAAGGAGAAGACTCTATTCTTAGCCTTTTATTCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618923.2
3UTR-3UTR TCA 90 bp GTCAATGAAATCCCAAAATCGTTCAATTACATCCTGTACTCGTTTCTCACATTTTGGAGACTGCAAACGTaGAACATTCTTGATATCTTC +
Preference number: 2 (lower is better)
Translates to: VNEIPKSFNYILYSFLTFWRLQT*NILDIF
Trigger: GAAGATATCAAGAATGTTTCACGTTTGCAGTCTCCA...AAATGTGAGAAACGAGTACAGGATGTAATTGAACGATTTTGGGATTTCATTGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR GCA 90 bp GTCAATGAAATCCCAAAATCGTTCAATTACATCCTGTACTCGTTTCTCACATTTCACACTTTTGGAGACTaGAAACGTGAAACATTCTTG +
Preference number: 2 (lower is better)
Translates to: VNEIPKSFNYILYSFLTFHTFGD*KRETFL
Trigger: CAAGAATGTTTCACGTTTGCAGTCTCCAAAAGTGTG...AAATGTGAGAAACGAGTACAGGATGTAATTGAACGATTTTGGGATTTCATTGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR CCA 72 bp GGTGTCCATTCTCTGGTGGTCCAGTTTTGGAGCTGCTaGCGCCGAAGGGATCACAGGGGCAGGCTGCAGGCG +
Preference number: 3 (lower is better)
Translates to: GVHSLVVQFWSC*RRRDHRGRLQA
Trigger: CGCCTGCAGCCTGCCCCTGTGATCCCTTCGGCGCCAGCAGCTCCAAAACTGGACCACCAGAGAATGGACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR GCA 72 bp GATGGTGTCCATTCTCTGGTGGTCCAGTTTTGGAGCTaGTGGCGCCGAAGGGATCACAGGGGCAGGCTGCAG +
Preference number: 3 (lower is better)
Translates to: DGVHSLVVQFWS*WRRRDHRGRLQ
Trigger: CTGCAGCCTGCCCCTGTGATCCCTTCGGCGCCAGCAGCTCCAAAACTGGACCACCAGAGAATGGACACCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp TCTCTGGTGGTCCAGTTTTGGAGCTGCTGGCGCCGAAGGGATCACAGGGGCAGGCACCTCCATGGCTGTTaGCTCTGGGAGAGCCAACAT +
Preference number: 3 (lower is better)
Translates to: SLVVQFWSCWRRRDHRGRHLHGC*LWESQH
Trigger: ATGTTGGCTCTCCCAGAGCAAACAGCCATGGAGGTG...CCTGCCCCTGTGATCCCTTCGGCGCCAGCAGCTCCAAAACTGGACCACCAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR CCA 72 bp TTCCTGGATGGTGTCCATTCTCTGGTGGTCCAGTTTTaGAGCTGCTGGCGCCGAAGGGATCACAGGGGCAGG +
Preference number: 3 (lower is better)
Translates to: FLDGVHSLVVQF*SCWRRRDHRGR
Trigger: CCTGCCCCTGTGATCCCTTCGGCGCCAGCAGCTCCAAAACTGGACCACCAGAGAATGGACACCATCCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR CCA 72 bp GTGCTGGGGTCTTCCTGGATGGTGTCCATTCTCTGGTaGTCCAGTTTTGGAGCTGCTGGCGCCGAAGGGATC +
Preference number: 3 (lower is better)
Translates to: VLGSSWMVSILW*SSFGAAGAEGI
Trigger: GATCCCTTCGGCGCCAGCAGCTCCAAAACTGGACCACCAGAGAATGGACACCATCCAGGAAGACCCCAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR CCA 72 bp TCTGTGCTGGGGTCTTCCTGGATGGTGTCCATTCTCTaGTGGTCCAGTTTTGGAGCTGCTGGCGCCGAAGGG +
Preference number: 3 (lower is better)
Translates to: SVLGSSWMVSIL*WSSFGAAGAEG
Trigger: CCCTTCGGCGCCAGCAGCTCCAAAACTGGACCACCAGAGAATGGACACCATCCAGGAAGACCCCAGCACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR GCA 72 bp TGCCTGCCTGCAGAGAAGGCCCATTCTGGTCTCCTCTaGCACTGTGTGGTAAGTTTACTGGGGTGGACTCTG +
Preference number: 3 (lower is better)
Translates to: CLPAEKAHSGLL*HCVVSLLGWTL
Trigger: CAGAGTCCACCCCAGTAAACTTACCACACAGTGGCAGAGGAGACCAGAATGGGCCTTCTCTGCAGGCAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618923.2
3UTR-3UTR CAA 90 bp AGCATTTCCTGGAGGCGGGCACTCACTGCTATTACCTGTGCAGTAGGACACGCCTCCCTGCAGCACACCTaGCAGGAGTTGTCAGTTTCA +
Preference number: 3 (lower is better)
Translates to: SISWRRALTAITCAVGHASLQHT*QELSVS
Trigger: TGAAACTGACAACTCCTGCAAGGTGTGCTGCAGGGA...GGCGTGTCCTACTGCACAGGTAATAGCAGTGAGTGCCCGCCTCCAGGAAATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp ACTGGACACCTTCCTTCAACGTGCAGTCGCTGTTGCAGCAGGTGTCGTTGTTCACACCTCCATGGCTGTTaGCTCTGGGAGAGCCAACAT +
Preference number: 3 (lower is better)
Translates to: TGHLPSTCSRCCSRCRCSHLHGC*LWESQH
Trigger: ATGTTGGCTCTCCCAGAGCAAACAGCCATGGAGGTG...TGAACAACGACACCTGCTGCAACAGCGACTGCACGTTGAAGGAAGGTGTCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp GAGGCAGCCTTTTCACTTCTGGTGACCGGATGGTCCGTGAGATCCTCAAATGACCACCTCCATGGCTGTTaGCTCTGGGAGAGCCAACAT +
Preference number: 3 (lower is better)
Translates to: EAAFSLLVTGWSVRSSNDHLHGC*LWESQH
Trigger: ATGTTGGCTCTCCCAGAGCAAACAGCCATGGAGGTG...GTCATTTGAGGATCTCACGGACCATCCGGTCACCAGAAGTGAAAAGGCTGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp CAGCATCGACATAGGGCACACAGCGGCCAGAAAGGTCCCTGCAGCACACCTTGCTTTATTGCTGCGTTCTaGAAAACACTCCTGGGCCTT +
Preference number: 3 (lower is better)
Translates to: QHRHRAHSGQKGPCSTPCFIAAF*KTLLGL
Trigger: AAGGCCCAGGAGTGTTTTCAAGAACGCAGCAATAAA...GCAAGGTGTGCTGCAGGGACCTTTCTGGCCGCTGTGTGCCCTATGTCGATGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp CAGCATCGACATAGGGCACACAGCGGCCAGAAAGGTCCCTGCAGCACACCTTGCCACACCTTGCAGGAGTaGTCAGTTTCATTACATGCA +
Preference number: 3 (lower is better)
Translates to: QHRHRAHSGQKGPCSTPCHTLQE*SVSLHA
Trigger: TGCATGTAATGAAACTGACAACTCCTGCAAGGTGTG...GCAAGGTGTGCTGCAGGGACCTTTCTGGCCGCTGTGTGCCCTATGTCGATGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp AACCCATCCTCGTCCATATGTGAGTCTGTGCTGGGGTCTTCCTGGATGGTGTCCGGCGCAGGAAAGGGTTaGATAATGCGAACCGATGCA +
Preference number: 3 (lower is better)
Translates to: NPSSSICESVLGSSWMVSGAGKG*IMRTDA
Trigger: TGCATCGGTTCGCATTATCAAACCCTTTCCTGCGCC...GGACACCATCCAGGAAGACCCCAGCACAGACTCACATATGGACGAGGATGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR TCA 72 bp ATAAAGAAGGAAACCATGCTCAGCTCAGAGTTTCTGTaGGTCTCTCTGCCTGCCTGCCTGCCTGCCTGCCTG +
Preference number: 3 (lower is better)
Translates to: IKKETMLSSEFL*VSLPACLPACL
Trigger: CAGGCAGGCAGGCAGGCAGGCAGGCAGAGAGACTCACAGAAACTCTGAGCTGAGCATGGTTTCCTTCTTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618923.2
3UTR TCA 72 bp GAAGGGGTCCTTCTCAAACCCATCCTCGTCCATATGTaGGTCTGTGCTGGGGTCTTCCTGGATGGTGTCCAT +
Preference number: 3 (lower is better)
Translates to: EGVLLKPILVHM*VCAGVFLDGVH
Trigger: ATGGACACCATCCAGGAAGACCCCAGCACAGACTCACATATGGACGAGGATGGGTTTGAGAAGGACCCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR TCA 72 bp ACTTCTGGTGACCGGATGGTCCGTGAGATCCTCAAATaGCTTGGCAGCTGTGCTGCTATTTGGGAAGGGGTC +
Preference number: 3 (lower is better)
Translates to: TSGDRMVREILK*LGSCAAIWEGV
Trigger: GACCCCTTCCCAAATAGCAGCACAGCTGCCAAGTCATTTGAGGATCTCACGGACCATCCGGTCACCAGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR GCA 72 bp GCACACAGCGGCCAGAAAGGTCCCTGCAGCACACCTTaGAGGAGTTGTCAGTTTCATTACATGCACAGGACT +
Preference number: 3 (lower is better)
Translates to: AHSGQKGPCSTP*RSCQFHYMHRT
Trigger: AGTCCTGTGCATGTAATGAAACTGACAACTCCTGCAAGGTGTGCTGCAGGGACCTTTCTGGCCGCTGTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR GCA 72 bp CATCGACATAGGGCACACAGCGGCCAGAAAGGTCCCTaGAGCACACCTTGCAGGAGTTGTCAGTTTCATTAC +
Preference number: 3 (lower is better)
Translates to: HRHRAHSGQKGP*STPCRSCQFHY
Trigger: GTAATGAAACTGACAACTCCTGCAAGGTGTGCTGCAGGGACCTTTCTGGCCGCTGTGTGCCCTATGTCGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR CCA 72 bp CGTCCATATGTGAGTCTGTGCTGGGGTCTTCCTGGATaGTGTCCATTCTCTGGTGGTCCAGTTTTGGAGCTG +
Preference number: 3 (lower is better)
Translates to: RPYVSLCWGLPG*CPFSGGPVLEL
Trigger: CAGCTCCAAAACTGGACCACCAGAGAATGGACACCATCCAGGAAGACCCCAGCACAGACTCACATATGGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp GAGGCAGCCTTTTCACTTCTGGTGACCGGATGGTCCGTGAGATCCTCAAATGACGGCGCAGGAAAGGGTTaGATAATGCGAACCGATGCA +
Preference number: 3 (lower is better)
Translates to: EAAFSLLVTGWSVRSSNDGAGKG*IMRTDA
Trigger: TGCATCGGTTCGCATTATCAAACCCTTTCCTGCGCC...GTCATTTGAGGATCTCACGGACCATCCGGTCACCAGAAGTGAAAAGGCTGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR TCA 72 bp TGTTCTCGTGATCGCCACTCACAGCTATGGGATACATaGCATATTTCCCTCCCTGGTCCTCATTCGGGGCAC +
Preference number: 3 (lower is better)
Translates to: CSRDRHSQLWDT*HISLPGPHSGH
Trigger: GTGCCCCGAATGAGGACCAGGGAGGGAAATATGTCATGTATCCCATAGCTGTGAGTGGCGATCACGAGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR GCA 72 bp TGTTCCTGTCACTGCACTGGACACCTTCCTTCAACGTaGAGTCGCTGTTGCAGCAGGTGTCGTTGTTCAGAT +
Preference number: 3 (lower is better)
Translates to: CSCHCTGHLPST*SRCCSRCRCSD
Trigger: ATCTGAACAACGACACCTGCTGCAACAGCGACTGCACGTTGAAGGAAGGTGTCCAGTGCAGTGACAGGAACA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR GCA 72 bp CCTTCTCAAACCCATCCTCGTCCATATGTGAGTCTGTaGTGGGGTCTTCCTGGATGGTGTCCATTCTCTGGT +
Preference number: 3 (lower is better)
Translates to: PSQTHPRPYVSL*WGLPGWCPFSG
Trigger: ACCAGAGAATGGACACCATCCAGGAAGACCCCAGCACAGACTCACATATGGACGAGGATGGGTTTGAGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR CCA 72 bp TCCTCGTCCATATGTGAGTCTGTGCTGGGGTCTTCCTaGATGGTGTCCATTCTCTGGTGGTCCAGTTTTGGA +
Preference number: 3 (lower is better)
Translates to: SSSICESVLGSS*MVSILWWSSFG
Trigger: TCCAAAACTGGACCACCAGAGAATGGACACCATCCAGGAAGACCCCAGCACAGACTCACATATGGACGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp CCCTGGTCCTCATTCGGGGCACATTCTGCTAGACCATCCGGATCATGTTCTGCTACCAGGTTTTACCTCTaGTGGAGACTTGAGAATGCG +
Preference number: 3 (lower is better)
Translates to: PWSSFGAHSARPSGSCSATRFYL*WRLENA
Trigger: CGCATTCTCAAGTCTCCACAAGAGGTAAAACCTGGT...AGCAGAACATGATCCGGATGGTCTAGCAGAATGTGCCCCGAATGAGGACCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp TGTCACTGCACTGGACACCTTCCTTCAACGTGCAGTCGCTGTTGCAGCAGGTGTGGCTATAATAAGCCTTaGGACAAACACCTCCATGGC +
Preference number: 3 (lower is better)
Translates to: CHCTGHLPSTCSRCCSRCGYNKP*DKHLHG
Trigger: GCCATGGAGGTGTTTGTCCAAAGGCTTATTATAGCC...ACACCTGCTGCAACAGCGACTGCACGTTGAAGGAAGGTGTCCAGTGCAGTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp GCTATTACCTGTGCAGTAGGACACGCCTTTGCAAGTAGCATTAATCGCCTCCTGAACGTGCAGTCGCTGTaGCAGCAGGTGTCGTTGTTC +
Preference number: 3 (lower is better)
Translates to: AITCAVGHAFASSINRLLNVQSL*QQVSLF
Trigger: GAACAACGACACCTGCTGCAACAGCGACTGCACGTT...CAGGAGGCGATTAATGCTACTTGCAAAGGCGTGTCCTACTGCACAGGTAATAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp CAAGCAAACAGTGTCATCTTCAGCATTTCCTGGAGGCGGGCACTCACTGCTATTAACGTGCAGTCGCTGTaGCAGCAGGTGTCGTTGTTC +
Preference number: 3 (lower is better)
Translates to: QANSVIFSISWRRALTAINVQSL*QQVSLF
Trigger: GAACAACGACACCTGCTGCAACAGCGACTGCACGTT...AATAGCAGTGAGTGCCCGCCTCCAGGAAATGCTGAAGATGACACTGTTTGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp AGGACTGTTCCTGTCACTGCACTGGACACCTTCCTTCAACGTGCAGTCGCTGTTGGCTATAATAAGCCTTaGGACAAACACCTCCATGGC +
Preference number: 3 (lower is better)
Translates to: RTVPVTALDTFLQRAVAVGYNKP*DKHLHG
Trigger: GCCATGGAGGTGTTTGTCCAAAGGCTTATTATAGCC...AACAGCGACTGCACGTTGAAGGAAGGTGTCCAGTGCAGTGACAGGAACAGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp CGTCCATATGTGAGTCTGTGCTGGGGTCTTCCTGGATGGTGTCCATTCTCTGGTTTGCAGCAGGTGTCGTaGTTCAGATACATGATGCCA +
Preference number: 3 (lower is better)
Translates to: RPYVSLCWGLPGWCPFSGLQQVS*FRYMMP
Trigger: TGGCATCATGTATCTGAACAACGACACCTGCTGCAA...ACCAGAGAATGGACACCATCCAGGAAGACCCCAGCACAGACTCACATATGGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp CAGAATCCATGCTGCTCAGCATTTCGACGTTACTGGGGTGAAACAGAGACAGAGTCCCTGCAGCACACCTaGCAGGAGTTGTCAGTTTCA +
Preference number: 3 (lower is better)
Translates to: QNPCCSAFRRYWGETETESLQHT*QELSVS
Trigger: TGAAACTGACAACTCCTGCAAGGTGTGCTGCAGGGA...CTCTGTCTCTGTTTCACCCCAGTAACGTCGAAATGCTGAGCAGCATGGATTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR GCA 72 bp CTGGGGCGCAGGAAAGGGTTTGATAATGCGAACCGATaGAGAATCCATGCTGCTCAGCATTTCGACGTTACT +
Preference number: 3 (lower is better)
Translates to: LGRRKGFDNANR*RIHAAQHFDVT
Trigger: AGTAACGTCGAAATGCTGAGCAGCATGGATTCTGCATCGGTTCGCATTATCAAACCCTTTCCTGCGCCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp GCACAGGACTCCAGCTGCTGTTCCCTCTCGCAGAAAGGGATGCATTTCCCATCCTCCCATATCAAAATCTaGGTATGTGAAAAGGTGTGC +
Preference number: 3 (lower is better)
Translates to: AQDSSCCSLSQKGMHFPSSHIKI*VCEKVC
Trigger: GCACACCTTTTCACATACCAAGATTTTGATATGGGA...GGATGGGAAATGCATCCCTTTCTGCGAGAGGGAACAGCAGCTGGAGTCCTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp TTCAGCATTTCCTGGAGGCGGGCACTCACTGCTATTACCTGTGCAGTAGGACACTTTATTGCTGCGTTCTaGAAAACACTCCTGGGCCTT +
Preference number: 3 (lower is better)
Translates to: FSISWRRALTAITCAVGHFIAAF*KTLLGL
Trigger: AAGGCCCAGGAGTGTTTTCAAGAACGCAGCAATAAA...GTGTCCTACTGCACAGGTAATAGCAGTGAGTGCCCGCCTCCAGGAAATGCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp GGTCCTTCTCAAACCCATCCTCGTCCATATGTGAGTCTGTGCTGGGGTCTTCCTTTTATTGCTGCGTTCTaGAAAACACTCCTGGGCCTT +
Preference number: 3 (lower is better)
Translates to: GPSQTHPRPYVSLCWGLPFIAAF*KTLLGL
Trigger: AAGGCCCAGGAGTGTTTTCAAGAACGCAGCAATAAA...AGGAAGACCCCAGCACAGACTCACATATGGACGAGGATGGGTTTGAGAAGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp AAGGGGTCCTTCTCAAACCCATCCTCGTCCATATGTGAGTCTGTGCTGGGGTCTTTCCCATCCTTACACTaGCCAAGATCCAAGCAAACA +
Preference number: 3 (lower is better)
Translates to: KGSFSNPSSSICESVLGSFPSLH*PRSKQT
Trigger: TGTTTGCTTGGATCTTGGCAAGTGTAAGGATGGGAA...AGACCCCAGCACAGACTCACATATGGACGAGGATGGGTTTGAGAAGGACCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp TCCCTCCCTGGTCCTCATTCGGGGCACATTCTGCTAGACCATCCGGATCATGTTTCGGCCCCATCTGTGTaGATTCTGATTATAACATCA +
Preference number: 3 (lower is better)
Translates to: SLPGPHSGHILLDHPDHVSAPSV*ILIITS
Trigger: TGATGTTATAATCAGAATCAACACAGATGGGGCCGA...AACATGATCCGGATGGTCTAGCAGAATGTGCCCCGAATGAGGACCAGGGAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649227.1
ENST00000650116.1
3UTR TCA 72 bp ATCGCCTCCTGGCACTTCTTCTGGGCAGTCTCAAACTaGCAGTTTTTACAGCAAGGACTGTTCCTGTCACTG +
Preference number: 3 (lower is better)
Translates to: IASWHFFWAVSN*QFLQQGLFLSL
Trigger: CAGTGACAGGAACAGTCCTTGCTGTAAAAACTGTCAGTTTGAGACTGCCCAGAAGAAGTGCCAGGAGGCGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR GCA 72 bp GAGTTGTCAGTTTCATTACATGCACAGGACTCCAGCTaGTGTTCCCTCTCGCAGAAAGGGATGCATTTCCCA +
Preference number: 3 (lower is better)
Translates to: ELSVSLHAQDSS*CSLSQKGMHFP
Trigger: TGGGAAATGCATCCCTTTCTGCGAGAGGGAACAGCAGCTGGAGTCCTGTGCATGTAATGAAACTGACAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp ACTGTTTACCTGCAGGAAGTTCAAACACATGACCAGCATCTGCTAAGTCACTTCCTGAAGTATCAAGTCTaGTGGGGACAGCCCCCAACC +
Preference number: 3 (lower is better)
Translates to: TVYLQEVQTHDQHLLSHFLKYQV*WGQPPT
Trigger: GGTTGGGGGCTGTCCCCACAAGACTTGATACTTCAG...GAAGTGACTTAGCAGATGCTGGTCATGTGTTTGAACTTCCTGCAGGTAAACAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310823.8
3UTR-3UTR CAA 90 bp TGCAGGAGTTGTCAGTTTCATTACATGCACAGGACTCCAGCTGCTGTTCCCTCTACCTCTTGTGGAGACTaGAGAATGCGAATCTGCTCT +
Preference number: 3 (lower is better)
Translates to: CRSCQFHYMHRTPAAVPSTSCGD*RMRICS
Trigger: AGAGCAGATTCGCATTCTCAAGTCTCCACAAGAGGT...AGAGGGAACAGCAGCTGGAGTCCTGTGCATGTAATGAAACTGACAACTCCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp CAAGCAAACAGTGTCATCTTCAGCATTTCCTGGAGGCGGGCACTCACTGCTATTTTGCAGCAGGTGTCGTaGTTCAGATACATGATGCCA +
Preference number: 3 (lower is better)
Translates to: QANSVIFSISWRRALTAILQQVS*FRYMMP
Trigger: TGGCATCATGTATCTGAACAACGACACCTGCTGCAA...AATAGCAGTGAGTGCCCGCCTCCAGGAAATGCTGAAGATGACACTGTTTGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR CCA 72 bp AAGCCTTTGGACAAACACCTCCATGGCTGTTTGCTCTaGGAGAGCCAACATAAGCTAATCCAAGAGTTCCCA +
Preference number: 3 (lower is better)
Translates to: KPLDKHLHGCLL*ESQHKLIQEFP
Trigger: TGGGAACTCTTGGATTAGCTTATGTTGGCTCTCCCAGAGCAAACAGCCATGGAGGTGTTTGTCCAAAGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp CAGCGGCCAGAAAGGTCCCTGCAGCACACCTTGCAGGAGTTGTCAGTTTCATTACTGTATTTTCTGCTTTaGCACCACAGGTCAAAAGAT +
Preference number: 3 (lower is better)
Translates to: QRPERSLQHTLQELSVSLLYFLL*HHRSKD
Trigger: ATCTTTTGACCTGTGGTGCAAAAGCAGAAAATACAG...TAATGAAACTGACAACTCCTGCAAGGTGTGCTGCAGGGACCTTTCTGGCCGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp CGTCCATATGTGAGTCTGTGCTGGGGTCTTCCTGGATGGTGTCCATTCTCTGGTCTGTATTTTCTGCTTTaGCACCACAGGTCAAAAGAT +
Preference number: 3 (lower is better)
Translates to: RPYVSLCWGLPGWCPFSGLYFLL*HHRSKD
Trigger: ATCTTTTGACCTGTGGTGCAAAAGCAGAAAATACAG...ACCAGAGAATGGACACCATCCAGGAAGACCCCAGCACAGACTCACATATGGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp CACAGGACTCCAGCTGCTGTTCCCTCTCGCAGAAAGGGATGCATTTCCCATCCTCATTTGGGTAACTTTTaGCCATGTTGTAGTGCTTTT +
Preference number: 3 (lower is better)
Translates to: HRTPAAVPSRRKGCISHPHLGNF*PCCSAF
Trigger: AAAAGCACTACAACATGGCAAAAAGTTACCCAAATG...AGGATGGGAAATGCATCCCTTTCTGCGAGAGGGAACAGCAGCTGGAGTCCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp CAGCGGCCAGAAAGGTCCCTGCAGCACACCTTGCAGGAGTTGTCAGTTTCATTATCCCATATCAAAATCTaGGTATGTGAAAAGGTGTGC +
Preference number: 3 (lower is better)
Translates to: QRPERSLQHTLQELSVSLSHIKI*VCEKVC
Trigger: GCACACCTTTTCACATACCAAGATTTTGATATGGGA...TAATGAAACTGACAACTCCTGCAAGGTGTGCTGCAGGGACCTTTCTGGCCGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp GGAAAGGGTTTGATAATGCGAACCGATGCAGAATCCATGCTGCTCAGCATTTCGGGCTATAATAAGCCTTaGGACAAACACCTCCATGGC +
Preference number: 3 (lower is better)
Translates to: GKGLIMRTDAESMLLSISGYNKP*DKHLHG
Trigger: GCCATGGAGGTGTTTGTCCAAAGGCTTATTATAGCC...CGAAATGCTGAGCAGCATGGATTCTGCATCGGTTCGCATTATCAAACCCTTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp CAGAATCCATGCTGCTCAGCATTTCGACGTTACTGGGGTGAAACAGAGACAGAGTTTATTGCTGCGTTCTaGAAAACACTCCTGGGCCTT +
Preference number: 3 (lower is better)
Translates to: QNPCCSAFRRYWGETETEFIAAF*KTLLGL
Trigger: AAGGCCCAGGAGTGTTTTCAAGAACGCAGCAATAAA...CTCTGTCTCTGTTTCACCCCAGTAACGTCGAAATGCTGAGCAGCATGGATTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp CAGAATCCATGCTGCTCAGCATTTCGACGTTACTGGGGTGAAACAGAGACAGAGTTCCCATCCTTACACTaGCCAAGATCCAAGCAAACA +
Preference number: 3 (lower is better)
Translates to: QNPCCSAFRRYWGETETEFPSLH*PRSKQT
Trigger: TGTTTGCTTGGATCTTGGCAAGTGTAAGGATGGGAA...CTCTGTCTCTGTTTCACCCCAGTAACGTCGAAATGCTGAGCAGCATGGATTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp GCTATTACCTGTGCAGTAGGACACGCCTTTGCAAGTAGCATTAATCGCCTCCTGTTCCCATCCTTACACTaGCCAAGATCCAAGCAAACA +
Preference number: 3 (lower is better)
Translates to: AITCAVGHAFASSINRLLFPSLH*PRSKQT
Trigger: TGTTTGCTTGGATCTTGGCAAGTGTAAGGATGGGAA...CAGGAGGCGATTAATGCTACTTGCAAAGGCGTGTCCTACTGCACAGGTAATAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp CACCTTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGTCCCTGCAGCACACCTaGCAGGAGTTGTCAGTTTCA +
Preference number: 3 (lower is better)
Translates to: HLTFSKGEGPNHTRTVYLSLQHT*QELSVS
Trigger: TGAAACTGACAACTCCTGCAAGGTGTGCTGCAGGGA...CAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp CACCTTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGCTGTGCTGCTATTaGGGAAGGGGTCCTTCTCAA +
Preference number: 3 (lower is better)
Translates to: HLTFSKGEGPNHTRTVYLQLCCY*GRGPSQ
Trigger: TTGAGAAGGACCCCTTCCCAAATAGCAGCACAGCTG...CAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp ACTGTTTACCTGCAGGAAGTTCAAACACATGACCAGCATCTGCTAAGTCACTTCCAGCTGTGCTGCTATTaGGGAAGGGGTCCTTCTCAA +
Preference number: 3 (lower is better)
Translates to: TVYLQEVQTHDQHLLSHFQLCCY*GRGPSQ
Trigger: TTGAGAAGGACCCCTTCCCAAATAGCAGCACAGCTG...GAAGTGACTTAGCAGATGCTGGTCATGTGTTTGAACTTCCTGCAGGTAAACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp TCCCTCCCTGGTCCTCATTCGGGGCACATTCTGCTAGACCATCCGGATCATGTTAGCTCTAATATGAATTaGTATGCACTTCAGGTGGTT +
Preference number: 3 (lower is better)
Translates to: SLPGPHSGHILLDHPDHVSSNMN*YALQVV
Trigger: AACCACCTGAAGTGCATACAAATTCATATTAGAGCT...AACATGATCCGGATGGTCTAGCAGAATGTGCCCCGAATGAGGACCAGGGAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647610.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp GGTCCTTCTCAAACCCATCCTCGTCCATATGTGAGTCTGTGCTGGGGTCTTCCTCATCCTTTTCTTCATTaGGGTAACTTTTTGCCATGT +
Preference number: 3 (lower is better)
Translates to: GPSQTHPRPYVSLCWGLPHPFLH*GNFLPC
Trigger: ACATGGCAAAAAGTTACCCAAATGAAGAAAAGGATG...AGGAAGACCCCAGCACAGACTCACATATGGACGAGGATGGGTTTGAGAAGGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp ATTGCTGCGTTCTTGAAAACACTCCTGGGCCTTACTTTCAATGGTCTTATAGATCACCTCCATGGCTGTTaGCTCTGGGAGAGCCAACAT +
Preference number: 3 (lower is better)
Translates to: IAAFLKTLLGLTFNGLIDHLHGC*LWESQH
Trigger: ATGTTGGCTCTCCCAGAGCAAACAGCCATGGAGGTG...ATCTATAAGACCATTGAAAGTAAGGCCCAGGAGTGTTTTCAAGAACGCAGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp GAAGAGCTGAGAACTAAATTAGCACTCTGTTTCTTTGCTGTCAACACGATTCTGAACGTGCAGTCGCTGTaGCAGCAGGTGTCGTTGTTC +
Preference number: 3 (lower is better)
Translates to: EELRTKLALCFFAVNTILNVQSL*QQVSLF
Trigger: GAACAACGACACCTGCTGCAACAGCGACTGCACGTT...CAGAATCGTGTTGACAGCAAAGAAACAGAGTGCTAATTTAGTTCTCAGCTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp TCTCAAACCCATCCTCGTCCATATGTGAGTCTGTGCTGGGGTCTTCCTGGATGGAGCTCTAATATGAATTaGTATGCACTTCAGGTGGTT +
Preference number: 3 (lower is better)
Translates to: SQTHPRPYVSLCWGLPGWSSNMN*YALQVV
Trigger: AACCACCTGAAGTGCATACAAATTCATATTAGAGCT...CCATCCAGGAAGACCCCAGCACAGACTCACATATGGACGAGGATGGGTTTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647610.1
ENST00000650116.1
3UTR GCA 72 bp CTCCTTCATCCACCCTCGAGTTCCCACAAACTTTATTaGTGCGTTCTTGAAAACACTCCTGGGCCTTACTTT +
Preference number: 3 (lower is better)
Translates to: LLHPPSSSHKLY*CVLENTPGPYF
Trigger: AAAGTAAGGCCCAGGAGTGTTTTCAAGAACGCAGCAATAAAGTTTGTGGGAACTCGAGGGTGGATGAAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR GCA 72 bp TCAGGCTCACCAACCACGTGTCCAGTGAAGAAGTCCTaGCATTTTACAGTGTACTCGCTTTCGTTTTTACCA +
Preference number: 3 (lower is better)
Translates to: SGSPTTCPVKKS*HFTVYSLSFLP
Trigger: TGGTAAAAACGAAAGCGAGTACACTGTAAAATGGCAGGACTTCTTCACTGGACACGTGGTTGGTGAGCCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp CAAGCAAACAGTGTCATCTTCAGCATTTCCTGGAGGCGGGCACTCACTGCTATTTGTCTACTAACCCTTTaGGGAGCAACTCTTCATTAT +
Preference number: 3 (lower is better)
Translates to: QANSVIFSISWRRALTAICLLTL*GATLHY
Trigger: ATAATGAAGAGTTGCTCCCAAAAGGGTTAGTAGACA...AATAGCAGTGAGTGCCCGCCTCCAGGAAATGCTGAAGATGACACTGTTTGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp TCCTTACACTTGCCAAGATCCAAGCAAACAGTGTCATCTTCAGCATTTCCTGGAACCTCTTGTGGAGACTaGAGAATGCGAATCTGCTCT +
Preference number: 3 (lower is better)
Translates to: SLHLPRSKQTVSSSAFPGTSCGD*RMRICS
Trigger: AGAGCAGATTCGCATTCTCAAGTCTCCACAAGAGGT...TCCAGGAAATGCTGAAGATGACACTGTTTGCTTGGATCTTGGCAAGTGTAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp ACTTCTTCTGGGCAGTCTCAAACTGACAGTTTTTACAGCAAGGACTGTTCCTGTACCTCTTGTGGAGACTaGAGAATGCGAATCTGCTCT +
Preference number: 3 (lower is better)
Translates to: TSSGQSQTDSFYSKDCSCTSCGD*RMRICS
Trigger: AGAGCAGATTCGCATTCTCAAGTCTCCACAAGAGGT...ACAGGAACAGTCCTTGCTGTAAAAACTGTCAGTTTGAGACTGCCCAGAAGAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp CACCTTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGACCAGGTTTTACCTCTaGTGGAGACTTGAGAATGCG +
Preference number: 3 (lower is better)
Translates to: HLTFSKGEGPNHTRTVYLTRFYL*WRLENA
Trigger: CGCATTCTCAAGTCTCCACAAGAGGTAAAACCTGGT...CAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp GCACATTCTGCTAGACCATCCGGATCATGTTCTGCTCCAAAATTATGTCCCAATACCAGGTTTTACCTCTaGTGGAGACTTGAGAATGCG +
Preference number: 3 (lower is better)
Translates to: AHSARPSGSCSAPKLCPNTRFYL*WRLENA
Trigger: CGCATTCTCAAGTCTCCACAAGAGGTAAAACCTGGT...ATTGGGACATAATTTTGGAGCAGAACATGATCCGGATGGTCTAGCAGAATGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR GCA 72 bp CTTCATCCACCCTCGAGTTCCCACAAACTTTATTGCTaGGTTCTTGAAAACACTCCTGGGCCTTACTTTCAA +
Preference number: 3 (lower is better)
Translates to: LHPPSSSHKLYC*VLENTPGPYFQ
Trigger: TTGAAAGTAAGGCCCAGGAGTGTTTTCAAGAACGCAGCAATAAAGTTTGTGGGAACTCGAGGGTGGATGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR GCA 72 bp TCTCGCAGAAAGGGATGCATTTCCCATCCTTACACTTaGCAAGATCCAAGCAAACAGTGTCATCTTCAGCAT +
Preference number: 3 (lower is better)
Translates to: SRRKGCISHPYT*QDPSKQCHLQH
Trigger: ATGCTGAAGATGACACTGTTTGCTTGGATCTTGGCAAGTGTAAGGATGGGAAATGCATCCCTTTCTGCGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp AATAAGCCTTTGGACAAACACCTCCATGGCTGTTTGCTCTGGGAGAGCCAACATTGTCTACTAACCCTTTaGGGAGCAACTCTTCATTAT +
Preference number: 3 (lower is better)
Translates to: NKPLDKHLHGCLLWESQHCLLTL*GATLHY
Trigger: ATAATGAAGAGTTGCTCCCAAAAGGGTTAGTAGACA...ATGTTGGCTCTCCCAGAGCAAACAGCCATGGAGGTGTTTGTCCAAAGGCTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp TGCAGGAGTTGTCAGTTTCATTACATGCACAGGACTCCAGCTGCTGTTCCCTCTCATTTGGGTAACTTTTaGCCATGTTGTAGTGCTTTT +
Preference number: 3 (lower is better)
Translates to: CRSCQFHYMHRTPAAVPSHLGNF*PCCSAF
Trigger: AAAAGCACTACAACATGGCAAAAAGTTACCCAAATG...AGAGGGAACAGCAGCTGGAGTCCTGTGCATGTAATGAAACTGACAACTCCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp AACCGATGCAGAATCCATGCTGCTCAGCATTTCGACGTTACTGGGGTGAAACAGCATTTGGGTAACTTTTaGCCATGTTGTAGTGCTTTT +
Preference number: 3 (lower is better)
Translates to: NRCRIHAAQHFDVTGVKQHLGNF*PCCSAF
Trigger: AAAAGCACTACAACATGGCAAAAAGTTACCCAAATG...CTGTTTCACCCCAGTAACGTCGAAATGCTGAGCAGCATGGATTCTGCATCGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR TCA 72 bp GTCAAATCTGGGATAGAACTACTTAGAAGCCCACCATaGTACACATCTAAACCACACCCTCCAATCCATCCT +
Preference number: 3 (lower is better)
Translates to: VKSGIELLRSPP*YTSKPHPPIHP
Trigger: AGGATGGATTGGAGGGTGTGGTTTAGATGTGTATCATGGTGGGCTTCTAAGTAGTTCTATCCCAGATTTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618923.2
3UTR TCA 72 bp ACCCTCGAGTTCCCACAAACTTTATTGCTGCGTTCTTaGAAACACTCCTGGGCCTTACTTTCAATGGTCTTA +
Preference number: 3 (lower is better)
Translates to: TLEFPQTLLLRS*KHSWALLSMVL
Trigger: TAAGACCATTGAAAGTAAGGCCCAGGAGTGTTTTCAAGAACGCAGCAATAAAGTTTGTGGGAACTCGAGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR CCA 72 bp GTGTTGATTCTGATTATAACATCATCATCTCTTATGTaGGCTAGAACCCTAGAGTCAGGCTCACCAACCACG +
Preference number: 3 (lower is better)
Translates to: VLILIITSSSLM*ARTLESGSPTT
Trigger: CGTGGTTGGTGAGCCTGACTCTAGGGTTCTAGCCCACATAAGAGATGATGATGTTATAATCAGAATCAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp AAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAACACATGACCCTGTATTTTCTGCTTTaGCACCACAGGTCAAAAGAT +
Preference number: 3 (lower is better)
Translates to: KGQTTQELFTCRKFKHMTLYFLL*HHRSKD
Trigger: ATCTTTTGACCTGTGGTGCAAAAGCAGAAAATACAG...GGTCATGTGTTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp CATCCACCCTCGAGTTCCCACAAACTTTATTGCTGCGTTCTTGAAAACACTCCTCTGTATTTTCTGCTTTaGCACCACAGGTCAAAAGAT +
Preference number: 3 (lower is better)
Translates to: HPPSSSHKLYCCVLENTPLYFLL*HHRSKD
Trigger: ATCTTTTGACCTGTGGTGCAAAAGCAGAAAATACAG...AGGAGTGTTTTCAAGAACGCAGCAATAAAGTTTGTGGGAACTCGAGGGTGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp CACCTTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGACACCCCACTCAACCTaGTATCAAATTCCAAAAGTG +
Preference number: 3 (lower is better)
Translates to: HLTFSKGEGPNHTRTVYLTPHST*YQIPKV
Trigger: CACTTTTGGAATTTGATACAAGGTTGAGTGGGGTGT...CAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000310823.8
3UTR-3UTR CAA 90 bp GAAGAGCTGAGAACTAAATTAGCACTCTGTTTCTTTGCTGTCAACACGATTCTGACCAGGTTTTACCTCTaGTGGAGACTTGAGAATGCG +
Preference number: 3 (lower is better)
Translates to: EELRTKLALCFFAVNTILTRFYL*WRLENA
Trigger: CGCATTCTCAAGTCTCCACAAGAGGTAAAACCTGGT...CAGAATCGTGTTGACAGCAAAGAAACAGAGTGCTAATTTAGTTCTCAGCTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp CCTGGCACTTCTTCTGGGCAGTCTCAAACTGACAGTTTTTACAGCAAGGACTGTCATCCTTTTCTTCATTaGGGTAACTTTTTGCCATGT +
Preference number: 3 (lower is better)
Translates to: PGTSSGQSQTDSFYSKDCHPFLH*GNFLPC
Trigger: ACATGGCAAAAAGTTACCCAAATGAAGAAAAGGATG...ACAGTCCTTGCTGTAAAAACTGTCAGTTTGAGACTGCCCAGAAGAAGTGCCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp TTGCAGCAGGTGTCGTTGTTCAGATACATGATGCCAGGATCACACTCTTCTCCTCATCCTTTTCTTCATTaGGGTAACTTTTTGCCATGT +
Preference number: 3 (lower is better)
Translates to: LQQVSLFRYMMPGSHSSPHPFLH*GNFLPC
Trigger: ACATGGCAAAAAGTTACCCAAATGAAGAAAAGGATG...AGGAGAAGAGTGTGATCCTGGCATCATGTATCTGAACAACGACACCTGCTGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp CCAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAACACATGACCAGCATACAGACCCAACGATGTaGTCTGCTAAAAACTTTCCA +
Preference number: 3 (lower is better)
Translates to: PNHTRTVYLQEVQTHDQHTDPTM*SAKNFP
Trigger: TGGAAAGTTTTTAGCAGACAACATCGTTGGGTCTGT...ATGCTGGTCATGTGTTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR TCA 72 bp AGTGCTTTTCACCAGGTTTTACCTCTTGTGGAGACTTaGGAATGCGAATCTGCTCTATCTGTATTCCATAGC +
Preference number: 3 (lower is better)
Translates to: SAFHQVLPLVET*ECESALSVFHS
Trigger: GCTATGGAATACAGATAGAGCAGATTCGCATTCTCAAGTCTCCACAAGAGGTAAAACCTGGTGAAAAGCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR CCA 72 bp GATCTGCTACCACCAATAATTTACACGTGTTCTTCATaGGATCTGGGTCAGCTCTTCTTTTCACTCGATGAA +
Preference number: 3 (lower is better)
Translates to: DLLPPIIYTCSS*DLGQLFFSLDE
Trigger: TTCATCGAGTGAAAAGAAGAGCTGACCCAGATCCCATGAAGAACACGTGTAAATTATTGGTGGTAGCAGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp GCAGGTAGTATTCTATCTCCTGGCTGGCTCATCACATTCAAAACAACCTGTTTTCAGGGCCCTAAACAGTaGGTAGATTCCATAAATTCA +
Preference number: 3 (lower is better)
Translates to: AGSILSPGWLITFKTTCFQGPKQ*VDSINS
Trigger: TGAATTTATGGAATCTACCAACTGTTTAGGGCCCTG...AAAACAGGTTGTTTTGAATGTGATGAGCCAGCCAGGAGATAGAATACTACCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310823.8
3UTR-3UTR CAA 90 bp GACATGAATGTCTTTGGGGAAAGGAACTGGTTTGACAATAAACAGGCTGCAGAGACTTTTCACTGGCTTTaGTACTGTGTACATGTTACC +
Preference number: 3 (lower is better)
Translates to: DMNVFGERNWFDNKQAAETFHWL*YCVHVT
Trigger: GGTAACATGTACACAGTACAAAAGCCAGTGAAAAGT...CTCTGCAGCCTGTTTATTGTCAAACCAGTTCCTTTCCCCAAAGACATTCATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618923.2
3UTR-3UTR CAA 90 bp CTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCCCATATCAAAATCTaGGTATGTGAAAAGGTGTGC +
Preference number: 3 (lower is better)
Translates to: LFKRRRAKPHKNCLPAGSSHIKI*VCEKVC
Trigger: GCACACCTTTTCACATACCAAGATTTTGATATGGGA...ACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp ACACTTAAGTCAGAAGAGCTGAGAACTAAATTAGCACTCTGTTTCTTTGCTGTCGGCTATAATAAGCCTTaGGACAAACACCTCCATGGC +
Preference number: 3 (lower is better)
Translates to: TLKSEELRTKLALCFFAVGYNKP*DKHLHG
Trigger: GCCATGGAGGTGTTTGTCCAAAGGCTTATTATAGCC...GACAGCAAAGAAACAGAGTGCTAATTTAGTTCTCAGCTCTTCTGACTTAAGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp CACCTTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGAACTTTCCAAAAGTATaGATGCTCAGCTGGTCAATG +
Preference number: 3 (lower is better)
Translates to: HLTFSKGEGPNHTRTVYLNFPKV*MLSWSM
Trigger: CATTGACCAGCTGAGCATCAATACTTTTGGAAAGTT...CAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp CTACCACCAATAATTTACACGTGTTCTTCATGGGATCTGGGTCAGCTCTTCTTTTGTCTACTAACCCTTTaGGGAGCAACTCTTCATTAT +
Preference number: 3 (lower is better)
Translates to: LPPIIYTCSSWDLGQLFFCLLTL*GATLHY
Trigger: ATAATGAAGAGTTGCTCCCAAAAGGGTTAGTAGACA...AAAGAAGAGCTGACCCAGATCCCATGAAGAACACGTGTAAATTATTGGTGGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp TACCTCTTGTGGAGACTTGAGAATGCGAATCTGCTCTATCTGTATTCCATAGCCCATTTGGGTAACTTTTaGCCATGTTGTAGTGCTTTT +
Preference number: 3 (lower is better)
Translates to: YLLWRLENANLLYLYSIAHLGNF*PCCSAF
Trigger: AAAAGCACTACAACATGGCAAAAAGTTACCCAAATG...GGCTATGGAATACAGATAGAGCAGATTCGCATTCTCAAGTCTCCACAAGAGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR-3UTR CAA 90 bp AGTTTGAAAACATCTTATTGTTCTCGTGATCGCCACTCACAGCTATGGGATACATGTCTACTAACCCTTTaGGGAGCAACTCTTCATTAT +
Preference number: 3 (lower is better)
Translates to: SLKTSYCSRDRHSQLWDTCLLTL*GATLHY
Trigger: ATAATGAAGAGTTGCTCCCAAAAGGGTTAGTAGACA...TGTATCCCATAGCTGTGAGTGGCGATCACGAGAACAATAAGATGTTTTCAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR TCA 72 bp CAGCTCTTCTTTTCACTCGATGAACAAGCTCTAATATaGATTTGTATGCACTTCAGGTGGTTCTCTGTCTAC +
Preference number: 3 (lower is better)
Translates to: QLFFSLDEQALI*ICMHFRWFSVY
Trigger: GTAGACAGAGAACCACCTGAAGTGCATACAAATTCATATTAGAGCTTGTTCATCGAGTGAAAAGAAGAGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647610.1
ENST00000650116.1
3UTR CCA 72 bp GAAACTAGTGACATGAATGTCTTTGGGGAAAGGAACTaGTTTGACAATAAACAGGCTGCAGAGACTTACTTT +
Preference number: 3 (lower is better)
Translates to: ETSDMNVFGERN*FDNKQAAETYF
Trigger: AAAGTAAGTCTCTGCAGCCTGTTTATTGTCAAACCAGTTCCTTTCCCCAAAGACATTCATGTCACTAGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618923.2
3UTR-3UTR CAA 90 bp AGTTTGAAAACATCTTATTGTTCTCGTGATCGCCACTCACAGCTATGGGATACACATCCTTTTCTTCATTaGGGTAACTTTTTGCCATGT +
Preference number: 3 (lower is better)
Translates to: SLKTSYCSRDRHSQLWDTHPFLH*GNFLPC
Trigger: ACATGGCAAAAAGTTACCCAAATGAAGAAAAGGATG...TGTATCCCATAGCTGTGAGTGGCGATCACGAGAACAATAAGATGTTTTCAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR TCA 72 bp TACATGCATGAACATGAAGTACTCTCCAACATACTGTaGAATGAAAAAGCAAGGTGTAAAAGTGTACTGCAT +
Preference number: 3 (lower is better)
Translates to: YMHEHEVLSNIL*NEKARCKSVLH
Trigger: ATGCAGTACACTTTTACACCTTGCTTTTTCATTTCACAGTATGTTGGAGAGTACTTCATGTTCATGCATGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618923.2
3UTR GCA 72 bp TACTGTGAAATGAAAAAGCAAGGTGTAAAAGTGTACTaGATAGCACCGTTGTGTCAAATACAGACATATACA +
Preference number: 3 (lower is better)
Translates to: YCEMKKQGVKVY*IAPLCQIQTYT
Trigger: TGTATATGTCTGTATTTGACACAACGGTGCTATGCAGTACACTTTTACACCTTGCTTTTTCATTTCACAGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618923.2
3UTR CCA 72 bp TTGACAATAAACAGGCTGCAGAGACTTACTTTTCACTaGCTTTTGTACTGTGTACATGTTACCTATTCAAAT +
Preference number: 3 (lower is better)
Translates to: LTINRLQRLTFH*LLYCVHVTYSN
Trigger: ATTTGAATAGGTAACATGTACACAGTACAAAAGCCAGTGAAAAGTAAGTCTCTGCAGCCTGTTTATTGTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618923.2
CDS-3UTR GCA 90 bp GCCTGCCTGCCTGCCTGCCTGCAGAGAAGGCCCATTCTGGTCTCCTCTGCCACTGCCTGCCTGCCTGCCTaGAGAGAAGGCCCATTCTGG +
Preference number: 4 (lower is better)
Translates to: ACLPACLQRRPILVSSATACLPA*REGPFW
Trigger: CCAGAATGGGCCTTCTCTGCAGGCAGGCAGGCAGGC...AGTGGCAGAGGAGACCAGAATGGGCCTTCTCTGCAGGCAGGCAGGCAGGCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618923.2
CDS-3UTR CCA 90 bp TCCCTCCCTGGTCCTCATTCGGGGCACATTCTGCTAGACCATCCGGATCATGTTAGCTTCTCGAGTCTCTaGTGGGGGCCGAAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: SLPGPHSGHILLDHPDHVSFSSL*WGPKPG
Trigger: CCCGGGCTTCGGCCCCCACCAGAGACTCGAGAAGCT...AACATGATCCGGATGGTCTAGCAGAATGTGCCCCGAATGAGGACCAGGGAGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650116.1
CDS-3UTR CCA 90 bp GGTCCTTCTCAAACCCATCCTCGTCCATATGTGAGTCTGTGCTGGGGTCTTCCTGTGGCGAGTCTCTGGTaGGGGCCGAAGCCCGGGTCA +
Preference number: 4 (lower is better)
Translates to: GPSQTHPRPYVSLCWGLPVASLW*GPKPGS
Trigger: TGACCCGGGCTTCGGCCCCCACCAGAGACTCGCCAC...AGGAAGACCCCAGCACAGACTCACATATGGACGAGGATGGGTTTGAGAAGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647610.1
ENST00000647979.1
CDS-3UTR CCA 90 bp CCCTGGTCCTCATTCGGGGCACATTCTGCTAGACCATCCGGATCATGTTCTGCTTCCCGCGCCGCCTACTaGGAAGATTCTACCGCCAGG +
Preference number: 4 (lower is better)
Translates to: PWSSFGAHSARPSGSCSASRAAY*EDSTAR
Trigger: CCTGGCGGTAGAATCTTCCCAGTAGGCGGCGCGGGA...AGCAGAACATGATCCGGATGGTCTAGCAGAATGTGCCCCGAATGAGGACCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649227.1
CDS-3UTR GCA 90 bp TCCATTCTCTGGTGGTCCAGTTTTGGAGCTGCTGGCGCCGAAGGGATCACAGGGGAGGCGGGCACTCACTaGTATTACCTGTGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: SILWWSSFGAAGAEGITGEAGTH*YYLCSR
Trigger: CCTACTGCACAGGTAATAGCAGTGAGTGCCCGCCTC...CCCTGTGATCCCTTCGGCGCCAGCAGCTCCAAAACTGGACCACCAGAGAATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp GTCACTGCACTGGACACCTTCCTTCAACGTGCAGTCGCTGTTGCAGCAGGTGTCGGCCAGAAAGGTCCCTaGAGCACACCTTGCAGGAGT +
Preference number: 4 (lower is better)
Translates to: VTALDTFLQRAVAVAAGVGQKGP*STPCRS
Trigger: ACTCCTGCAAGGTGTGCTGCAGGGACCTTTCTGGCC...GACACCTGCTGCAACAGCGACTGCACGTTGAAGGAAGGTGTCCAGTGCAGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp CACAGGACTCCAGCTGCTGTTCCCTCTCGCAGAAAGGGATGCATTTCCCATCCTCTGGTGGTCCAGTTTTaGAGCTGCTGGCGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: HRTPAAVPSRRKGCISHPLVVQF*SCWRRR
Trigger: CCTTCGGCGCCAGCAGCTCCAAAACTGGACCACCAG...AGGATGGGAAATGCATCCCTTTCTGCGAGAGGGAACAGCAGCTGGAGTCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp GAGGCAGCCTTTTCACTTCTGGTGACCGGATGGTCCGTGAGATCCTCAAATGACAATGCGAGTCTCTGGTaGGGGCCGAAGCCCGGGTCA +
Preference number: 4 (lower is better)
Translates to: EAAFSLLVTGWSVRSSNDNASLW*GPKPGS
Trigger: TGACCCGGGCTTCGGCCCCCACCAGAGACTCGCATT...GTCATTTGAGGATCTCACGGACCATCCGGTCACCAGAAGTGAAAAGGCTGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649227.1
CDS-3UTR TCA 90 bp TCTCTGGTGGTCCAGTTTTGGAGCTGCTGGCGCCGAAGGGATCACAGGGGCAGGTCGACGTTACTGGGGTaGAACAGAGACAGAGATTCA +
Preference number: 4 (lower is better)
Translates to: SLVVQFWSCWRRRDHRGRSTLLG*NRDRDS
Trigger: TGAATCTCTGTCTCTGTTTCACCCCAGTAACGTCGA...CCTGCCCCTGTGATCCCTTCGGCGCCAGCAGCTCCAAAACTGGACCACCAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp TTCCTGGATGGTGTCCATTCTCTGGTGGTCCAGTTTTGGAGCTGCTGGCGCCGAGCACAGGACTCCAGCTaGTGTTCCCTCTCGCAGAAA +
Preference number: 4 (lower is better)
Translates to: FLDGVHSLVVQFWSCWRRAQDSS*CSLSQK
Trigger: TTTCTGCGAGAGGGAACAGCAGCTGGAGTCCTGTGC...TCGGCGCCAGCAGCTCCAAAACTGGACCACCAGAGAATGGACACCATCCAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp GTTCCTGTCACTGCACTGGACACCTTCCTTCAACGTGCAGTCGCTGTTGCAGCAGGCCAGAAAGGTCCCTaGAGCACACCTTGCAGGAGT +
Preference number: 4 (lower is better)
Translates to: VPVTALDTFLQRAVAVAAGQKGP*STPCRS
Trigger: ACTCCTGCAAGGTGTGCTGCAGGGACCTTTCTGGCC...TGCTGCAACAGCGACTGCACGTTGAAGGAAGGTGTCCAGTGCAGTGACAGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp CACAGGACTCCAGCTGCTGTTCCCTCTCGCAGAAAGGGATGCATTTCCCATCCTGTCCAGTTTTGGAGCTaGTGGCGCCGAAGGGATCAC +
Preference number: 4 (lower is better)
Translates to: HRTPAAVPSRRKGCISHPVQFWS*WRRRDH
Trigger: GTGATCCCTTCGGCGCCAGCAGCTCCAAAACTGGAC...AGGATGGGAAATGCATCCCTTTCTGCGAGAGGGAACAGCAGCTGGAGTCCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp CAGCGGCCAGAAAGGTCCCTGCAGCACACCTTGCAGGAGTTGTCAGTTTCATTACTGGTGGTCCAGTTTTaGAGCTGCTGGCGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: QRPERSLQHTLQELSVSLLVVQF*SCWRRR
Trigger: CCTTCGGCGCCAGCAGCTCCAAAACTGGACCACCAG...TAATGAAACTGACAACTCCTGCAAGGTGTGCTGCAGGGACCTTTCTGGCCGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp AGGACTCCAGCTGCTGTTCCCTCTCGCAGAAAGGGATGCATTTCCCATCCTTACCTGGTGGTCCAGTTTTaGAGCTGCTGGCGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: RTPAAVPSRRKGCISHPYLVVQF*SCWRRR
Trigger: CCTTCGGCGCCAGCAGCTCCAAAACTGGACCACCAG...GTAAGGATGGGAAATGCATCCCTTTCTGCGAGAGGGAACAGCAGCTGGAGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp CGTCCATATGTGAGTCTGTGCTGGGGTCTTCCTGGATGGTGTCCATTCTCTGGTCTGGTGGTCCAGTTTTaGAGCTGCTGGCGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: RPYVSLCWGLPGWCPFSGLVVQF*SCWRRR
Trigger: CCTTCGGCGCCAGCAGCTCCAAAACTGGACCACCAG...ACCAGAGAATGGACACCATCCAGGAAGACCCCAGCACAGACTCACATATGGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp CAGCATCGACATAGGGCACACAGCGGCCAGAAAGGTCCCTGCAGCACACCTTGCGTGTCCATTCTCTGGTaGTCCAGTTTTGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: QHRHRAHSGQKGPCSTPCVSILW*SSFGAA
Trigger: AGCAGCTCCAAAACTGGACCACCAGAGAATGGACAC...GCAAGGTGTGCTGCAGGGACCTTTCTGGCCGCTGTGTGCCCTATGTCGATGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp TTCAGCATTTCCTGGAGGCGGGCACTCACTGCTATTACCTGTGCAGTAGGACACGGCCAGAAAGGTCCCTaGAGCACACCTTGCAGGAGT +
Preference number: 4 (lower is better)
Translates to: FSISWRRALTAITCAVGHGQKGP*STPCRS
Trigger: ACTCCTGCAAGGTGTGCTGCAGGGACCTTTCTGGCC...GTGTCCTACTGCACAGGTAATAGCAGTGAGTGCCCGCCTCCAGGAAATGCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp AGCATTTCCTGGAGGCGGGCACTCACTGCTATTACCTGTGCAGTAGGACACGCCGGACAAACACCTCCATaGCTGTTTGCTCTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: SISWRRALTAITCAVGHAGQTPP*LFALGE
Trigger: CTCTCCCAGAGCAAACAGCCATGGAGGTGTTTGTCC...GGCGTGTCCTACTGCACAGGTAATAGCAGTGAGTGCCCGCCTCCAGGAAATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp TTCCTGGATGGTGTCCATTCTCTGGTGGTCCAGTTTTGGAGCTGCTGGCGCCGAATCTTCAGCATTTCCTaGAGGCGGGCACTCACTGCT +
Preference number: 4 (lower is better)
Translates to: FLDGVHSLVVQFWSCWRRIFSIS*RRALTA
Trigger: AGCAGTGAGTGCCCGCCTCCAGGAAATGCTGAAGAT...TCGGCGCCAGCAGCTCCAAAACTGGACCACCAGAGAATGGACACCATCCAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR CAA 72 bp GGCACACAGCGGCCAGAAAGGTCCCTGCAGCACACCTaGCAGGAGTTGTCAGTTTCATTACATGCACAGGAC +
Preference number: 4 (lower is better)
Translates to: GTQRPERSLQHT*QELSVSLHAQD
Trigger: GTCCTGTGCATGTAATGAAACTGACAACTCCTGCAAGGTGTGCTGCAGGGACCTTTCTGGCCGCTGTGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp CAAGCAAACAGTGTCATCTTCAGCATTTCCTGGAGGCGGGCACTCACTGCTATTTGGGCAGCCTTCGCCTaGCGGGGTTTCGGAAAACTG +
Preference number: 4 (lower is better)
Translates to: QANSVIFSISWRRALTAIWAAFA*RGFGKL
Trigger: CAGTTTTCCGAAACCCCGTCAGGCGAAGGCTGCCCA...AATAGCAGTGAGTGCCCGCCTCCAGGAAATGCTGAAGATGACACTGTTTGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
CDS-3UTR TCA 90 bp GCCTGCCTGCCTGCCTGCCTGCAGAGAAGGCCCATTCTGGTCTCCTCTGCCACTCTCTCCAACATACTGTaGAATGAAAAAGCAAGGTGT +
Preference number: 4 (lower is better)
Translates to: ACLPACLQRRPILVSSATLSNIL*NEKARC
Trigger: ACACCTTGCTTTTTCATTTCACAGTATGTTGGAGAG...AGTGGCAGAGGAGACCAGAATGGGCCTTCTCTGCAGGCAGGCAGGCAGGCAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618923.2
CDS-3UTR GCA 90 bp GTCCCTGCAGCACACCTTGCAGGAGTTGTCAGTTTCATTACATGCACAGGACTCAGGAATAGGAGAGACTaGCTCATGTTCCCGGCCCCG +
Preference number: 4 (lower is better)
Translates to: VPAAHLAGVVSFITCTGLRNRRD*LMFPAP
Trigger: CGGGGCCGGGAACATGAGGCAGTCTCTCCTATTCCT...GAGTCCTGTGCATGTAATGAAACTGACAACTCCTGCAAGGTGTGCTGCAGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp AACCCATCCTCGTCCATATGTGAGTCTGTGCTGGGGTCTTCCTGGATGGTGTCCACGTGCAGTCGCTGTTaGAGCAGGTGTCGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: NPSSSICESVLGSSWMVSTCSRC*SRCRCS
Trigger: TGAACAACGACACCTGCTGCAACAGCGACTGCACGT...GGACACCATCCAGGAAGACCCCAGCACAGACTCACATATGGACGAGGATGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp GCACAGGACTCCAGCTGCTGTTCCCTCTCGCAGAAAGGGATGCATTTCCCATCCGACTGTTCCTGTCACTaGACTGGACACCTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: AQDSSCCSLSQKGMHFPSDCSCH*TGHLPS
Trigger: TGAAGGAAGGTGTCCAGTGCAGTGACAGGAACAGTC...GGATGGGAAATGCATCCCTTTCTGCGAGAGGGAACAGCAGCTGGAGTCCTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp CACAGGACTCCAGCTGCTGTTCCCTCTCGCAGAAAGGGATGCATTTCCCATCCTGGACAAACACCTCCATaGCTGTTTGCTCTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: HRTPAAVPSRRKGCISHPGQTPP*LFALGE
Trigger: CTCTCCCAGAGCAAACAGCCATGGAGGTGTTTGTCC...AGGATGGGAAATGCATCCCTTTCTGCGAGAGGGAACAGCAGCTGGAGTCCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp GTCACTGCACTGGACACCTTCCTTCAACGTGCAGTCGCTGTTGCAGCAGGTGTCACATATTTCCCTCCCTaGTCCTCATTCGGGGCACAT +
Preference number: 4 (lower is better)
Translates to: VTALDTFLQRAVAVAAGVTYFPP*SSFGAH
Trigger: ATGTGCCCCGAATGAGGACCAGGGAGGGAAATATGT...GACACCTGCTGCAACAGCGACTGCACGTTGAAGGAAGGTGTCCAGTGCAGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp CTTCTGGTGACCGGATGGTCCGTGAGATCCTCAAATGACTTGGCAGCTGTGCTGGCATTAATCGCCTCCTaGCACTTCTTCTGGGCAGTC +
Preference number: 4 (lower is better)
Translates to: LLVTGWSVRSSNDLAAVLALIAS*HFFWAV
Trigger: GACTGCCCAGAAGAAGTGCCAGGAGGCGATTAATGC...CAGCACAGCTGCCAAGTCATTTGAGGATCTCACGGACCATCCGGTCACCAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp CTTCTGGTGACCGGATGGTCCGTGAGATCCTCAAATGACTTGGCAGCTGTGCTGATCTTCAGCATTTCCTaGAGGCGGGCACTCACTGCT +
Preference number: 4 (lower is better)
Translates to: LLVTGWSVRSSNDLAAVLIFSIS*RRALTA
Trigger: AGCAGTGAGTGCCCGCCTCCAGGAAATGCTGAAGAT...CAGCACAGCTGCCAAGTCATTTGAGGATCTCACGGACCATCCGGTCACCAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp TCCATTCTCTGGTGGTCCAGTTTTGGAGCTGCTGGCGCCGAAGGGATCACAGGGGCATTTCGACGTTACTaGGGTGAAACAGAGACAGAG +
Preference number: 4 (lower is better)
Translates to: SILWWSSFGAAGAEGITGAFRRY*GETETE
Trigger: CTCTGTCTCTGTTTCACCCCAGTAACGTCGAAATGC...CCCTGTGATCCCTTCGGCGCCAGCAGCTCCAAAACTGGACCACCAGAGAATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp CAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAAGTGGCGAGTCTCTGGTaGGGGCCGAAGCCCGGGTCA +
Preference number: 4 (lower is better)
Translates to: QKEKGQTTQELFTCRKFKVASLW*GPKPGS
Trigger: TGACCCGGGCTTCGGCCCCCACCAGAGACTCGCCAC...TTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647610.1
ENST00000647979.1
CDS-3UTR CCA 90 bp TTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGCCGAATGCGAGTCTCTaGTGGGGGCCGAAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: LPFQKEKGQTTQELFTCRPNASL*WGPKPG
Trigger: CCCGGGCTTCGGCCCCCACCAGAGACTCGCATTCGG...CCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649227.1
CDS-3UTR TCA 90 bp TTGCAGCAGGTGTCGTTGTTCAGATACATGATGCCAGGATCACACTCTTCTCCTTGGGCAGCCTTCGCCTaGCGGGGTTTCGGAAAACTG +
Preference number: 4 (lower is better)
Translates to: LQQVSLFRYMMPGSHSSPWAAFA*RGFGKL
Trigger: CAGTTTTCCGAAACCCCGTCAGGCGAAGGCTGCCCA...AGGAGAAGAGTGTGATCCTGGCATCATGTATCTGAACAACGACACCTGCTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
CDS-3UTR TCA 90 bp TTCAGCATTTCCTGGAGGCGGGCACTCACTGCTATTACCTGTGCAGTAGGACACATCCTCGTCCATATGTaGGTCTGTGCTGGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: FSISWRRALTAITCAVGHILVHM*VCAGVF
Trigger: GAAGACCCCAGCACAGACTCACATATGGACGAGGAT...GTGTCCTACTGCACAGGTAATAGCAGTGAGTGCCCGCCTCCAGGAAATGCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp ACTGCACTGGACACCTTCCTTCAACGTGCAGTCGCTGTTGCAGCAGGTGTCGTTACCTCCATGGCTGTTTaGTCTGGGAGAGCCAACATA +
Preference number: 4 (lower is better)
Translates to: TALDTFLQRAVAVAAGVVTSMAV*SGRANI
Trigger: TATGTTGGCTCTCCCAGAGCAAACAGCCATGGAGGT...AACGACACCTGCTGCAACAGCGACTGCACGTTGAAGGAAGGTGTCCAGTGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp CAGCGGCCAGAAAGGTCCCTGCAGCACACCTTGCAGGAGTTGTCAGTTTCATTAACGTGCAGTCGCTGTTaGAGCAGGTGTCGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: QRPERSLQHTLQELSVSLTCSRC*SRCRCS
Trigger: TGAACAACGACACCTGCTGCAACAGCGACTGCACGT...TAATGAAACTGACAACTCCTGCAAGGTGTGCTGCAGGGACCTTTCTGGCCGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp TTTGTTCAGCATCGACATAGGGCACACAGCGGCCAGAAAGGTCCCTGCAGCACACACTGCTATTACCTGTaGAGTAGGACACGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: FVQHRHRAHSGQKGPCSTHCYYL*SRTRLC
Trigger: GCAAAGGCGTGTCCTACTGCACAGGTAATAGCAGTG...TGTGCTGCAGGGACCTTTCTGGCCGCTGTGTGCCCTATGTCGATGCTGAACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp GTTCCTGTCACTGCACTGGACACCTTCCTTCAACGTGCAGTCGCTGTTGCAGCACCCTGCAGCACACCTTaGAGGAGTTGTCAGTTTCAT +
Preference number: 4 (lower is better)
Translates to: VPVTALDTFLQRAVAVAAPCSTP*RSCQFH
Trigger: ATGAAACTGACAACTCCTGCAAGGTGTGCTGCAGGG...TGCTGCAACAGCGACTGCACGTTGAAGGAAGGTGTCCAGTGCAGTGACAGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp GAACCGATGCAGAATCCATGCTGCTCAGCATTTCGACGTTACTGGGGTGAAACAGTCCAGTTTTGGAGCTaGTGGCGCCGAAGGGATCAC +
Preference number: 4 (lower is better)
Translates to: EPMQNPCCSAFRRYWGETVQFWS*WRRRDH
Trigger: GTGATCCCTTCGGCGCCAGCAGCTCCAAAACTGGAC...TGTTTCACCCCAGTAACGTCGAAATGCTGAGCAGCATGGATTCTGCATCGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp CCTGGTCCTCATTCGGGGCACATTCTGCTAGACCATCCGGATCATGTTCTGCTCATGACTTGGCAGCTGTaGTGCTATTTGGGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: PGPHSGHILLDHPDHVLLMTWQL*CYLGRG
Trigger: ACCCCTTCCCAAATAGCAGCACAGCTGCCAAGTCAT...GAGCAGAACATGATCCGGATGGTCTAGCAGAATGTGCCCCGAATGAGGACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp TTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAGCTTCTCGAGTCTCTaGTGGGGGCCGAAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: LPFQKEKGQTTQELFTCRSFSSL*WGPKPG
Trigger: CCCGGGCTTCGGCCCCCACCAGAGACTCGAGAAGCT...CCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310823.8
ENST00000650116.1
CDS-3UTR CCA 90 bp CCTGGTCCTCATTCGGGGCACATTCTGCTAGACCATCCGGATCATGTTCTGCTCTTCCTGTCACTGCACTaGACACCTTCCTTCAACGTG +
Preference number: 4 (lower is better)
Translates to: PGPHSGHILLDHPDHVLLFLSLH*TPSFNV
Trigger: CACGTTGAAGGAAGGTGTCCAGTGCAGTGACAGGAA...GAGCAGAACATGATCCGGATGGTCTAGCAGAATGTGCCCCGAATGAGGACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp TATGGGATACATGACATATTTCCCTCCCTGGTCCTCATTCGGGGCACATTCTGCCAGTTTTGGAGCTGCTaGCGCCGAAGGGATCACAGG +
Preference number: 4 (lower is better)
Translates to: YGIHDIFPSLVLIRGTFCQFWSC*RRRDHR
Trigger: CCTGTGATCCCTTCGGCGCCAGCAGCTCCAAAACTG...GCAGAATGTGCCCCGAATGAGGACCAGGGAGGGAAATATGTCATGTATCCCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp TCCCTCCCTGGTCCTCATTCGGGGCACATTCTGCTAGACCATCCGGATCATGTTGTGTCCATTCTCTGGTaGTCCAGTTTTGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SLPGPHSGHILLDHPDHVVSILW*SSFGAA
Trigger: AGCAGCTCCAAAACTGGACCACCAGAGAATGGACAC...AACATGATCCGGATGGTCTAGCAGAATGTGCCCCGAATGAGGACCAGGGAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp GAGGCAGCCTTTTCACTTCTGGTGACCGGATGGTCCGTGAGATCCTCAAATGACTGGGGTCTTCCTGGATaGTGTCCATTCTCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: EAAFSLLVTGWSVRSSNDWGLPG*CPFSGG
Trigger: ACCACCAGAGAATGGACACCATCCAGGAAGACCCCA...GTCATTTGAGGATCTCACGGACCATCCGGTCACCAGAAGTGAAAAGGCTGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp ATCTTCAGCATTTCCTGGAGGCGGGCACTCACTGCTATTACCTGTGCAGTAGGAGTGCTGGGGTCTTCCTaGATGGTGTCCATTCTCTGG +
Preference number: 4 (lower is better)
Translates to: IFSISWRRALTAITCAVGVLGSS*MVSILW
Trigger: CCAGAGAATGGACACCATCCAGGAAGACCCCAGCAC...TCCTACTGCACAGGTAATAGCAGTGAGTGCCCGCCTCCAGGAAATGCTGAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp CCTGGTCCTCATTCGGGGCACATTCTGCTAGACCATCCGGATCATGTTCTGCTCTATGTGAGTCTGTGCTaGGGTCTTCCTGGATGGTGT +
Preference number: 4 (lower is better)
Translates to: PGPHSGHILLDHPDHVLLYVSLC*GLPGWC
Trigger: ACACCATCCAGGAAGACCCCAGCACAGACTCACATA...GAGCAGAACATGATCCGGATGGTCTAGCAGAATGTGCCCCGAATGAGGACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp AACCCATCCTCGTCCATATGTGAGTCTGTGCTGGGGTCTTCCTGGATGGTGTCCCTTCTGGTGACCGGATaGTCCGTGAGATCCTCAAAT +
Preference number: 4 (lower is better)
Translates to: NPSSSICESVLGSSWMVSLLVTG*SVRSSN
Trigger: ATTTGAGGATCTCACGGACCATCCGGTCACCAGAAG...GGACACCATCCAGGAAGACCCCAGCACAGACTCACATATGGACGAGGATGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp TTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAAAGTGGCGAGTCTCTaGTGGGGGCCGAAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: LPFQKEKGQTTQELFTCRKVASL*WGPKPG
Trigger: CCCGGGCTTCGGCCCCCACCAGAGACTCGCCACTTT...CCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000647610.1
ENST00000647979.1
3UTR CAA 72 bp CTGCACTGGACACCTTCCTTCAACGTGCAGTCGCTGTaGCAGCAGGTGTCGTTGTTCAGATACATGATGCCA +
Preference number: 4 (lower is better)
Translates to: LHWTPSFNVQSL*QQVSLFRYMMP
Trigger: TGGCATCATGTATCTGAACAACGACACCTGCTGCAACAGCGACTGCACGTTGAAGGAAGGTGTCCAGTGCAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp ACTGCACTGGACACCTTCCTTCAACGTGCAGTCGCTGTTGCAGCAGGTGTCGTTCCTCTTGTGGAGACTTaGGAATGCGAATCTGCTCTA +
Preference number: 4 (lower is better)
Translates to: TALDTFLQRAVAVAAGVVPLVET*ECESAL
Trigger: TAGAGCAGATTCGCATTCTCAAGTCTCCACAAGAGG...AACGACACCTGCTGCAACAGCGACTGCACGTTGAAGGAAGGTGTCCAGTGCAGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp TTGTACTCTCTTCCCCTCTGCCCATGTATCTGTAGAAGCGATGATCTGCTACCAAGGAATAGGAGAGACTaGCTCATGTTCCCGGCCCCG +
Preference number: 4 (lower is better)
Translates to: LYSLPLCPCICRSDDLLPRNRRD*LMFPAP
Trigger: CGGGGCCGGGAACATGAGGCAGTCTCTCCTATTCCT...TGGTAGCAGATCATCGCTTCTACAGATACATGGGCAGAGGGGAAGAGAGTACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp ACTGGACACCTTCCTTCAACGTGCAGTCGCTGTTGCAGCAGGTGTCGTTGTTCAACCTCCATGGCTGTTTaGTCTGGGAGAGCCAACATA +
Preference number: 4 (lower is better)
Translates to: TGHLPSTCSRCCSRCRCSTSMAV*SGRANI
Trigger: TATGTTGGCTCTCCCAGAGCAAACAGCCATGGAGGT...TGAACAACGACACCTGCTGCAACAGCGACTGCACGTTGAAGGAAGGTGTCCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp CAGCGGCCAGAAAGGTCCCTGCAGCACACCTTGCAGGAGTTGTCAGTTTCATTAGACTGTTCCTGTCACTaGACTGGACACCTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: QRPERSLQHTLQELSVSLDCSCH*TGHLPS
Trigger: TGAAGGAAGGTGTCCAGTGCAGTGACAGGAACAGTC...TAATGAAACTGACAACTCCTGCAAGGTGTGCTGCAGGGACCTTTCTGGCCGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp CTTCTGGTGACCGGATGGTCCGTGAGATCCTCAAATGACTTGGCAGCTGTGCTGGTCAGTTTCATTACATaGACAGGACTCCAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LLVTGWSVRSSNDLAAVLVSFIT*TGLQLL
Trigger: CAGCAGCTGGAGTCCTGTGCATGTAATGAAACTGAC...CAGCACAGCTGCCAAGTCATTTGAGGATCTCACGGACCATCCGGTCACCAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp TCTCAAACCCATCCTCGTCCATATGTGAGTCTGTGCTGGGGTCTTCCTGGATGGCCCTGCAGCACACCTTaGAGGAGTTGTCAGTTTCAT +
Preference number: 4 (lower is better)
Translates to: SQTHPRPYVSLCWGLPGWPCSTP*RSCQFH
Trigger: ATGAAACTGACAACTCCTGCAAGGTGTGCTGCAGGG...CCATCCAGGAAGACCCCAGCACAGACTCACATATGGACGAGGATGGGTTTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp ATCTTCAGCATTTCCTGGAGGCGGGCACTCACTGCTATTACCTGTGCAGTAGGACCATATGTGAGTCTGTaGTGGGGTCTTCCTGGATGG +
Preference number: 4 (lower is better)
Translates to: IFSISWRRALTAITCAVGPYVSL*WGLPGW
Trigger: CCATCCAGGAAGACCCCAGCACAGACTCACATATGG...TCCTACTGCACAGGTAATAGCAGTGAGTGCCCGCCTCCAGGAAATGCTGAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp AGGACTCCAGCTGCTGTTCCCTCTCGCAGAAAGGGATGCATTTCCCATCCTTACATGACTTGGCAGCTGTaGTGCTATTTGGGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: RTPAAVPSRRKGCISHPYMTWQL*CYLGRG
Trigger: ACCCCTTCCCAAATAGCAGCACAGCTGCCAAGTCAT...GTAAGGATGGGAAATGCATCCCTTTCTGCGAGAGGGAACAGCAGCTGGAGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp ACTGGTTTGACAATAAACAGGCTGCAGAGACTTACTTTTCACTGGCTTTTGTACGCCTGCCTGCCTGCCTaGCTGCCTGCAGAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: TGLTINRLQRLTFHWLLYACLPA*LPAEKA
Trigger: GGCCTTCTCTGCAGGCAGGCAGGCAGGCAGGCAGGC...GTACAAAAGCCAGTGAAAAGTAAGTCTCTGCAGCCTGTTTATTGTCAAACCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618923.2
CDS-3UTR CCA 90 bp TTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGTCCCGCGCCGCCTACTaGGAAGATTCTACCGCCAGG +
Preference number: 4 (lower is better)
Translates to: LPFQKEKGQTTQELFTCRSRAAY*EDSTAR
Trigger: CCTGGCGGTAGAATCTTCCCAGTAGGCGGCGCGGGA...CCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310823.8
ENST00000649227.1
CDS-3UTR CCA 90 bp CCAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAACACATGACCAGCATTTCTCGAGTCTCTGGTaGGGGCCGAAGCCCGGGTCA +
Preference number: 4 (lower is better)
Translates to: PNHTRTVYLQEVQTHDQHFSSLW*GPKPGS
Trigger: TGACCCGGGCTTCGGCCCCCACCAGAGACTCGAGAA...ATGCTGGTCATGTGTTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310823.8
ENST00000650116.1
CDS-3UTR CCA 90 bp CAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAATTCTCGAGTCTCTGGTaGGGGCCGAAGCCCGGGTCA +
Preference number: 4 (lower is better)
Translates to: QKEKGQTTQELFTCRKFKFSSLW*GPKPGS
Trigger: TGACCCGGGCTTCGGCCCCCACCAGAGACTCGAGAA...TTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310823.8
ENST00000650116.1
CDS-3UTR CCA 90 bp CCTGGTCCTCATTCGGGGCACATTCTGCTAGACCATCCGGATCATGTTCTGCTCATGGTGTCCATTCTCTaGTGGTCCAGTTTTGGAGCT +
Preference number: 4 (lower is better)
Translates to: PGPHSGHILLDHPDHVLLMVSIL*WSSFGA
Trigger: AGCTCCAAAACTGGACCACCAGAGAATGGACACCAT...GAGCAGAACATGATCCGGATGGTCTAGCAGAATGTGCCCCGAATGAGGACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp AGGACTCCAGCTGCTGTTCCCTCTCGCAGAAAGGGATGCATTTCCCATCCTTACTATGTGAGTCTGTGCTaGGGTCTTCCTGGATGGTGT +
Preference number: 4 (lower is better)
Translates to: RTPAAVPSRRKGCISHPYYVSLC*GLPGWC
Trigger: ACACCATCCAGGAAGACCCCAGCACAGACTCACATA...GTAAGGATGGGAAATGCATCCCTTTCTGCGAGAGGGAACAGCAGCTGGAGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp AAGGGGTCCTTCTCAAACCCATCCTCGTCCATATGTGAGTCTGTGCTGGGGTCTCTTCTGGTGACCGGATaGTCCGTGAGATCCTCAAAT +
Preference number: 4 (lower is better)
Translates to: KGSFSNPSSSICESVLGSLLVTG*SVRSSN
Trigger: ATTTGAGGATCTCACGGACCATCCGGTCACCAGAAG...AGACCCCAGCACAGACTCACATATGGACGAGGATGGGTTTGAGAAGGACCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp TGTCACTGCACTGGACACCTTCCTTCAACGTGCAGTCGCTGTTGCAGCAGGTGTCTTCTTTTCACTCGATaGACAAGCTCTTCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: CHCTGHLPSTCSRCCSRCLLFTR*TSSSGG
Trigger: ACCACCTGAAGAGCTTGTTCATCGAGTGAAAAGAAG...ACACCTGCTGCAACAGCGACTGCACGTTGAAGGAAGGTGTCCAGTGCAGTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647979.1
ENST00000649227.1
CDS-3UTR TCA 90 bp ACTGCACTGGACACCTTCCTTCAACGTGCAGTCGCTGTTGCAGCAGGTGTCGTTTTATTGCTGCGTTCTTaGAAACACTCCTGGGCCTTA +
Preference number: 4 (lower is better)
Translates to: TALDTFLQRAVAVAAGVVLLLRS*KHSWAL
Trigger: TAAGGCCCAGGAGTGTTTTCAAGAACGCAGCAATAA...AACGACACCTGCTGCAACAGCGACTGCACGTTGAAGGAAGGTGTCCAGTGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp AACCCATCCTCGTCCATATGTGAGTCTGTGCTGGGGTCTTCCTGGATGGTGTCCCGTTGTTCAGATACATaGTGCCAGGATCACACTCTT +
Preference number: 4 (lower is better)
Translates to: NPSSSICESVLGSSWMVSRCSDT*CQDHTL
Trigger: AAGAGTGTGATCCTGGCATCATGTATCTGAACAACG...GGACACCATCCAGGAAGACCCCAGCACAGACTCACATATGGACGAGGATGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp CACAGGACTCCAGCTGCTGTTCCCTCTCGCAGAAAGGGATGCATTTCCCATCCTTGGGCAGTCTCAAACTaGCAGTTTTTACAGCAAGGA +
Preference number: 4 (lower is better)
Translates to: HRTPAAVPSRRKGCISHPWAVSN*QFLQQG
Trigger: TCCTTGCTGTAAAAACTGTCAGTTTGAGACTGCCCA...AGGATGGGAAATGCATCCCTTTCTGCGAGAGGGAACAGCAGCTGGAGTCCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp GAGGCAGCCTTTTCACTTCTGGTGACCGGATGGTCCGTGAGATCCTCAAATGACTCGACGTTACTGGGGTaGAACAGAGACAGAGATTCA +
Preference number: 4 (lower is better)
Translates to: EAAFSLLVTGWSVRSSNDSTLLG*NRDRDS
Trigger: TGAATCTCTGTCTCTGTTTCACCCCAGTAACGTCGA...GTCATTTGAGGATCTCACGGACCATCCGGTCACCAGAAGTGAAAAGGCTGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp GTTCCCTCTCGCAGAAAGGGATGCATTTCCCATCCTTACACTTGCCAAGATCCACGTGAGATCCTCAAATaGCTTGGCAGCTGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: VPSRRKGCISHPYTCQDPREILK*LGSCAA
Trigger: AGCAGCACAGCTGCCAAGTCATTTGAGGATCTCACG...TGGATCTTGGCAAGTGTAAGGATGGGAAATGCATCCCTTTCTGCGAGAGGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp CCCTGGTCCTCATTCGGGGCACATTCTGCTAGACCATCCGGATCATGTTCTGCTGGAAGTTCAAACACATaGCCAGCATCTGCTAAGTCA +
Preference number: 4 (lower is better)
Translates to: PWSSFGAHSARPSGSCSAGSSNT*PASAKS
Trigger: TGACTTAGCAGATGCTGGTCATGTGTTTGAACTTCC...AGCAGAACATGATCCGGATGGTCTAGCAGAATGTGCCCCGAATGAGGACCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp GTTCCTGTCACTGCACTGGACACCTTCCTTCAACGTGCAGTCGCTGTTGCAGCAGGAAGTTCAAACACATaGCCAGCATCTGCTAAGTCA +
Preference number: 4 (lower is better)
Translates to: VPVTALDTFLQRAVAVAAGSSNT*PASAKS
Trigger: TGACTTAGCAGATGCTGGTCATGTGTTTGAACTTCC...TGCTGCAACAGCGACTGCACGTTGAAGGAAGGTGTCCAGTGCAGTGACAGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp CAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAACGACGCCCCCAGAAGTaGAGGTGGCGTTACCAAAGG +
Preference number: 4 (lower is better)
Translates to: QKEKGQTTQELFTCRKFKRRPQK*RWRYQR
Trigger: CCTTTGGTAACGCCACCTGCACTTCTGGGGGCGTCG...TTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310823.8
CDS-3UTR GCA 90 bp TCCATTCTCTGGTGGTCCAGTTTTGGAGCTGCTGGCGCCGAAGGGATCACAGGGCACACTTTTGGAGACTaGAAACGTGAAACATTCTTG +
Preference number: 4 (lower is better)
Translates to: SILWWSSFGAAGAEGITGHTFGD*KRETFL
Trigger: CAAGAATGTTTCACGTTTGCAGTCTCCAAAAGTGTG...CCCTGTGATCCCTTCGGCGCCAGCAGCTCCAAAACTGGACCACCAGAGAATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp TTGCAGCAGGTGTCGTTGTTCAGATACATGATGCCAGGATCACACTCTTCTCCTGCACAGGACTCCAGCTaGTGTTCCCTCTCGCAGAAA +
Preference number: 4 (lower is better)
Translates to: LQQVSLFRYMMPGSHSSPAQDSS*CSLSQK
Trigger: TTTCTGCGAGAGGGAACAGCAGCTGGAGTCCTGTGC...AGGAGAAGAGTGTGATCCTGGCATCATGTATCTGAACAACGACACCTGCTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp GATCCAAGCAAACAGTGTCATCTTCAGCATTTCCTGGAGGCGGGCACTCACTGCGTCAGTTTCATTACATaGACAGGACTCCAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: DPSKQCHLQHFLEAGTHCVSFIT*TGLQLL
Trigger: CAGCAGCTGGAGTCCTGTGCATGTAATGAAACTGAC...GCAGTGAGTGCCCGCCTCCAGGAAATGCTGAAGATGACACTGTTTGCTTGGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp TTCAGCATTTCCTGGAGGCGGGCACTCACTGCTATTACCTGTGCAGTAGGACACGATAATGCGAACCGATaGAGAATCCATGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: FSISWRRALTAITCAVGHDNANR*RIHAAQ
Trigger: CTGAGCAGCATGGATTCTGCATCGGTTCGCATTATC...GTGTCCTACTGCACAGGTAATAGCAGTGAGTGCCCGCCTCCAGGAAATGCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp GAACCGATGCAGAATCCATGCTGCTCAGCATTTCGACGTTACTGGGGTGAAACACCATATGTGAGTCTGTaGTGGGGTCTTCCTGGATGG +
Preference number: 4 (lower is better)
Translates to: EPMQNPCCSAFRRYWGETPYVSL*WGLPGW
Trigger: CCATCCAGGAAGACCCCAGCACAGACTCACATATGG...TGTTTCACCCCAGTAACGTCGAAATGCTGAGCAGCATGGATTCTGCATCGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp AACCGATGCAGAATCCATGCTGCTCAGCATTTCGACGTTACTGGGGTGAAACAGCCATATGTGAGTCTGTaGTGGGGTCTTCCTGGATGG +
Preference number: 4 (lower is better)
Translates to: NRCRIHAAQHFDVTGVKQPYVSL*WGLPGW
Trigger: CCATCCAGGAAGACCCCAGCACAGACTCACATATGG...CTGTTTCACCCCAGTAACGTCGAAATGCTGAGCAGCATGGATTCTGCATCGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp ATCTTCAGCATTTCCTGGAGGCGGGCACTCACTGCTATTACCTGTGCAGTAGGAATGACTTGGCAGCTGTaGTGCTATTTGGGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: IFSISWRRALTAITCAVGMTWQL*CYLGRG
Trigger: ACCCCTTCCCAAATAGCAGCACAGCTGCCAAGTCAT...TCCTACTGCACAGGTAATAGCAGTGAGTGCCCGCCTCCAGGAAATGCTGAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp TTCCTGGATGGTGTCCATTCTCTGGTGGTCCAGTTTTGGAGCTGCTGGCGCCGAAGCACTCTGTTTCTTTaGTGTCAACACGATTCTGAC +
Preference number: 4 (lower is better)
Translates to: FLDGVHSLVVQFWSCWRRSTLFL*CQHDSD
Trigger: GTCAGAATCGTGTTGACAGCAAAGAAACAGAGTGCT...TCGGCGCCAGCAGCTCCAAAACTGGACCACCAGAGAATGGACACCATCCAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp GTCTTTGGGGAAAGGAACTGGTTTGACAATAAACAGGCTGCAGAGACTTACTTTGCCTGCCTGCCTGCCTaGCTGCAGAGAAGGCCCATT +
Preference number: 4 (lower is better)
Translates to: VFGERNWFDNKQAAETYFACLPA*LQRRPI
Trigger: AATGGGCCTTCTCTGCAGGCAGGCAGGCAGGCAGGC...AAAGTAAGTCTCTGCAGCCTGTTTATTGTCAAACCAGTTCCTTTCCCCAAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618923.2
CDS-3UTR CCA 90 bp CTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAAGTCCCCAGAAGTGCAGGTaGCGTTACCAAAGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: LFKRRRAKPHKNCLPAGSPQKCR*RYQRPA
Trigger: AGCCGGCCTTTGGTAACGCCACCTGCACTTCTGGGG...ACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310823.8
CDS-3UTR CCA 90 bp GCTCCCATTAGTAAGTGTGAGATAAAGAAGGAAACCATGCTCAGCTCAGAGTTTTCCCGCGCCGCCTACTaGGAAGATTCTACCGCCAGG +
Preference number: 4 (lower is better)
Translates to: APISKCEIKKETMLSSEFSRAAY*EDSTAR
Trigger: CCTGGCGGTAGAATCTTCCCAGTAGGCGGCGCGGGA...AAACTCTGAGCTGAGCATGGTTTCCTTCTTTATCTCACACTTACTAATGGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618923.2
CDS-3UTR CCA 90 bp GTTCCTGTCACTGCACTGGACACCTTCCTTCAACGTGCAGTCGCTGTTGCAGCAGTTCTTCATGGGATCTaGGTCAGCTCTTCTTTTCAC +
Preference number: 4 (lower is better)
Translates to: VPVTALDTFLQRAVAVAAVLHGI*VSSSFH
Trigger: GTGAAAAGAAGAGCTGACCCAGATCCCATGAAGAAC...TGCTGCAACAGCGACTGCACGTTGAAGGAAGGTGTCCAGTGCAGTGACAGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp ACTGGACACCTTCCTTCAACGTGCAGTCGCTGTTGCAGCAGGTGTCGTTGTTCACATGGCTGTTTGCTCTaGGAGAGCCAACATAAGCTA +
Preference number: 4 (lower is better)
Translates to: TGHLPSTCSRCCSRCRCSHGCLL*ESQHKL
Trigger: TAGCTTATGTTGGCTCTCCCAGAGCAAACAGCCATG...TGAACAACGACACCTGCTGCAACAGCGACTGCACGTTGAAGGAAGGTGTCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp GATCCAAGCAAACAGTGTCATCTTCAGCATTTCCTGGAGGCGGGCACTCACTGCCATGGCTGTTTGCTCTaGGAGAGCCAACATAAGCTA +
Preference number: 4 (lower is better)
Translates to: DPSKQCHLQHFLEAGTHCHGCLL*ESQHKL
Trigger: TAGCTTATGTTGGCTCTCCCAGAGCAAACAGCCATG...GCAGTGAGTGCCCGCCTCCAGGAAATGCTGAAGATGACACTGTTTGCTTGGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp GTCACTGCACTGGACACCTTCCTTCAACGTGCAGTCGCTGTTGCAGCAGGTGTCGCTATAATAAGCCTTTaGACAAACACCTCCATGGCT +
Preference number: 4 (lower is better)
Translates to: VTALDTFLQRAVAVAAGVAIISL*TNTSMA
Trigger: AGCCATGGAGGTGTTTGTCCAAAGGCTTATTATAGC...GACACCTGCTGCAACAGCGACTGCACGTTGAAGGAAGGTGTCCAGTGCAGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp GAACCGATGCAGAATCCATGCTGCTCAGCATTTCGACGTTACTGGGGTGAAACATGGGGTCTTCCTGGATaGTGTCCATTCTCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: EPMQNPCCSAFRRYWGETWGLPG*CPFSGG
Trigger: ACCACCAGAGAATGGACACCATCCAGGAAGACCCCA...TGTTTCACCCCAGTAACGTCGAAATGCTGAGCAGCATGGATTCTGCATCGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp GGAAAGGGTTTGATAATGCGAACCGATGCAGAATCCATGCTGCTCAGCATTTCGGTGCTGGGGTCTTCCTaGATGGTGTCCATTCTCTGG +
Preference number: 4 (lower is better)
Translates to: GKGLIMRTDAESMLLSISVLGSS*MVSILW
Trigger: CCAGAGAATGGACACCATCCAGGAAGACCCCAGCAC...CGAAATGCTGAGCAGCATGGATTCTGCATCGGTTCGCATTATCAAACCCTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp GAAGAGCTGAGAACTAAATTAGCACTCTGTTTCTTTGCTGTCAACACGATTCTGAAAGTGGCGAGTCTCTaGTGGGGGCCGAAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: EELRTKLALCFFAVNTILKVASL*WGPKPG
Trigger: CCCGGGCTTCGGCCCCCACCAGAGACTCGCCACTTT...CAGAATCGTGTTGACAGCAAAGAAACAGAGTGCTAATTTAGTTCTCAGCTCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000647610.1
ENST00000647979.1
CDS-3UTR TCA 90 bp TCACCTTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTTGGGCAGCCTTCGCCTaGCGGGGTTTCGGAAAACTG +
Preference number: 4 (lower is better)
Translates to: SPYLFKRRRAKPHKNCLPWAAFA*RGFGKL
Trigger: CAGTTTTCCGAAACCCCGTCAGGCGAAGGCTGCCCA...AGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAAGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
CDS-3UTR TCA 90 bp ACTGCACTGGACACCTTCCTTCAACGTGCAGTCGCTGTTGCAGCAGGTGTCGTTCCACCACCACGACCTTaGAATTTTGTGAAAAACGTT +
Preference number: 4 (lower is better)
Translates to: TALDTFLQRAVAVAAGVVPPPRP*NFVKNV
Trigger: AACGTTTTTCACAAAATTTCAAGGTCGTGGTGGTGG...AACGACACCTGCTGCAACAGCGACTGCACGTTGAAGGAAGGTGTCCAGTGCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp GTCCCTGCAGCACACCTTGCAGGAGTTGTCAGTTTCATTACATGCACAGGACTCCCTCTTGTGGAGACTTaGGAATGCGAATCTGCTCTA +
Preference number: 4 (lower is better)
Translates to: VPAAHLAGVVSFITCTGLPLVET*ECESAL
Trigger: TAGAGCAGATTCGCATTCTCAAGTCTCCACAAGAGG...GAGTCCTGTGCATGTAATGAAACTGACAACTCCTGCAAGGTGTGCTGCAGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp GATCCAAGCAAACAGTGTCATCTTCAGCATTTCCTGGAGGCGGGCACTCACTGCTTATTGCTGCGTTCTTaGAAACACTCCTGGGCCTTA +
Preference number: 4 (lower is better)
Translates to: DPSKQCHLQHFLEAGTHCLLLRS*KHSWAL
Trigger: TAAGGCCCAGGAGTGTTTTCAAGAACGCAGCAATAA...GCAGTGAGTGCCCGCCTCCAGGAAATGCTGAAGATGACACTGTTTGCTTGGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp CGTCCATATGTGAGTCTGTGCTGGGGTCTTCCTGGATGGTGTCCATTCTCTGGTTTATTGCTGCGTTCTTaGAAACACTCCTGGGCCTTA +
Preference number: 4 (lower is better)
Translates to: RPYVSLCWGLPGWCPFSGLLLRS*KHSWAL
Trigger: TAAGGCCCAGGAGTGTTTTCAAGAACGCAGCAATAA...ACCAGAGAATGGACACCATCCAGGAAGACCCCAGCACAGACTCACATATGGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp AGGACTGTTCCTGTCACTGCACTGGACACCTTCCTTCAACGTGCAGTCGCTGTTCGTTGTTCAGATACATaGTGCCAGGATCACACTCTT +
Preference number: 4 (lower is better)
Translates to: RTVPVTALDTFLQRAVAVRCSDT*CQDHTL
Trigger: AAGAGTGTGATCCTGGCATCATGTATCTGAACAACG...AACAGCGACTGCACGTTGAAGGAAGGTGTCCAGTGCAGTGACAGGAACAGTCCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp ACTGGACACCTTCCTTCAACGTGCAGTCGCTGTTGCAGCAGGTGTCGTTGTTCATGGGCAGTCTCAAACTaGCAGTTTTTACAGCAAGGA +
Preference number: 4 (lower is better)
Translates to: TGHLPSTCSRCCSRCRCSWAVSN*QFLQQG
Trigger: TCCTTGCTGTAAAAACTGTCAGTTTGAGACTGCCCA...TGAACAACGACACCTGCTGCAACAGCGACTGCACGTTGAAGGAAGGTGTCCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp CTTCTGGTGACCGGATGGTCCGTGAGATCCTCAAATGACTTGGCAGCTGTGCTGTGCTCAGCTGGTCAATaGAATCCCAAAATCGTTCAA +
Preference number: 4 (lower is better)
Translates to: LLVTGWSVRSSNDLAAVLCSAGQ*NPKIVQ
Trigger: TTGAACGATTTTGGGATTTCATTGACCAGCTGAGCA...CAGCACAGCTGCCAAGTCATTTGAGGATCTCACGGACCATCCGGTCACCAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp GTCCCTGCAGCACACCTTGCAGGAGTTGTCAGTTTCATTACATGCACAGGACTCCTGTCAACACGATTCTaGCGCTGCAGTTTAAAGGAG +
Preference number: 4 (lower is better)
Translates to: VPAAHLAGVVSFITCTGLLSTRF*RCSLKE
Trigger: CTCCTTTAAACTGCAGCGTCAGAATCGTGTTGACAG...GAGTCCTGTGCATGTAATGAAACTGACAACTCCTGCAAGGTGTGCTGCAGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp CTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAAGTAGGAATAGGAGAGACTaGCTCATGTTCCCGGCCCCG +
Preference number: 4 (lower is better)
Translates to: LFKRRRAKPHKNCLPAGSRNRRD*LMFPAP
Trigger: CGGGGCCGGGAACATGAGGCAGTCTCTCCTATTCCT...ACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp TTCCTGGATGGTGTCCATTCTCTGGTGGTCCAGTTTTGGAGCTGCTGGCGCCGAATCCGGATCATGTTCTaGTCCAAAATTATGTCCCAA +
Preference number: 4 (lower is better)
Translates to: FLDGVHSLVVQFWSCWRRIRIMF*SKIMSQ
Trigger: TTGGGACATAATTTTGGAGCAGAACATGATCCGGAT...TCGGCGCCAGCAGCTCCAAAACTGGACCACCAGAGAATGGACACCATCCAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp AAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAACACATGACCCACCTTCCTTCAACGTaGAGTCGCTGTTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: KGQTTQELFTCRKFKHMTHLPST*SRCCSR
Trigger: CCTGCTGCAACAGCGACTGCACGTTGAAGGAAGGTG...GGTCATGTGTTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp GAACCGATGCAGAATCCATGCTGCTCAGCATTTCGACGTTACTGGGGTGAAACAGACTGTTCCTGTCACTaGACTGGACACCTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: EPMQNPCCSAFRRYWGETDCSCH*TGHLPS
Trigger: TGAAGGAAGGTGTCCAGTGCAGTGACAGGAACAGTC...TGTTTCACCCCAGTAACGTCGAAATGCTGAGCAGCATGGATTCTGCATCGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp AAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAACACATGACCGAGGCGGGCACTCACTaGTATTACCTGTGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: KGQTTQELFTCRKFKHMTEAGTH*YYLCSR
Trigger: CCTACTGCACAGGTAATAGCAGTGAGTGCCCGCCTC...GGTCATGTGTTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp ACCTTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCGGCCAGAAAGGTCCCTaGAGCACACCTTGCAGGAGT +
Preference number: 4 (lower is better)
Translates to: TLPFQKEKGQTTQELFTCGQKGP*STPCRS
Trigger: ACTCCTGCAAGGTGTGCTGCAGGGACCTTTCTGGCC...GCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp GCTATTACCTGTGCAGTAGGACACGCCTTTGCAAGTAGCATTAATCGCCTCCTGCCGATGCAGAATCCATaGTGCTCAGCATTTCGACGT +
Preference number: 4 (lower is better)
Translates to: AITCAVGHAFASSINRLLPMQNP*CSAFRR
Trigger: ACGTCGAAATGCTGAGCAGCATGGATTCTGCATCGG...CAGGAGGCGATTAATGCTACTTGCAAAGGCGTGTCCTACTGCACAGGTAATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp CAAGCAAACAGTGTCATCTTCAGCATTTCCTGGAGGCGGGCACTCACTGCTATTCCGATGCAGAATCCATaGTGCTCAGCATTTCGACGT +
Preference number: 4 (lower is better)
Translates to: QANSVIFSISWRRALTAIPMQNP*CSAFRR
Trigger: ACGTCGAAATGCTGAGCAGCATGGATTCTGCATCGG...AATAGCAGTGAGTGCCCGCCTCCAGGAAATGCTGAAGATGACACTGTTTGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp GAACCGATGCAGAATCCATGCTGCTCAGCATTTCGACGTTACTGGGGTGAAACACCGATGCAGAATCCATaGTGCTCAGCATTTCGACGT +
Preference number: 4 (lower is better)
Translates to: EPMQNPCCSAFRRYWGETPMQNP*CSAFRR
Trigger: ACGTCGAAATGCTGAGCAGCATGGATTCTGCATCGG...TGTTTCACCCCAGTAACGTCGAAATGCTGAGCAGCATGGATTCTGCATCGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp CACCTTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGGTCCAGTTTTGGAGCTaGTGGCGCCGAAGGGATCAC +
Preference number: 4 (lower is better)
Translates to: HLTFSKGEGPNHTRTVYLVQFWS*WRRRDH
Trigger: GTGATCCCTTCGGCGCCAGCAGCTCCAAAACTGGAC...CAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp TACCTCTTGTGGAGACTTGAGAATGCGAATCTGCTCTATCTGTATTCCATAGCCGTCCAGTTTTGGAGCTaGTGGCGCCGAAGGGATCAC +
Preference number: 4 (lower is better)
Translates to: YLLWRLENANLLYLYSIAVQFWS*WRRRDH
Trigger: GTGATCCCTTCGGCGCCAGCAGCTCCAAAACTGGAC...GGCTATGGAATACAGATAGAGCAGATTCGCATTCTCAAGTCTCCACAAGAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp TACTGTGAAATGAAAAAGCAAGGTGTAAAAGTGTACTGCATAGCACCGTTGTGTAGCTTCTCGAGTCTCTaGTGGGGGCCGAAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: YCEMKKQGVKVYCIAPLCSFSSL*WGPKPG
Trigger: CCCGGGCTTCGGCCCCCACCAGAGACTCGAGAAGCT...ACACAACGGTGCTATGCAGTACACTTTTACACCTTGCTTTTTCATTTCACAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000618923.2
CDS-3UTR CCA 90 bp ACTGTTTACCTGCAGGAAGTTCAAACACATGACCAGCATCTGCTAAGTCACTTCCAGTTTTGGAGCTGCTaGCGCCGAAGGGATCACAGG +
Preference number: 4 (lower is better)
Translates to: TVYLQEVQTHDQHLLSHFQFWSC*RRRDHR
Trigger: CCTGTGATCCCTTCGGCGCCAGCAGCTCCAAAACTG...GAAGTGACTTAGCAGATGCTGGTCATGTGTTTGAACTTCCTGCAGGTAAACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp GCAGGTAGTATTCTATCTCCTGGCTGGCTCATCACATTCAAAACAACCTGTTTTCTGGTGGTCCAGTTTTaGAGCTGCTGGCGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: AGSILSPGWLITFKTTCFLVVQF*SCWRRR
Trigger: CCTTCGGCGCCAGCAGCTCCAAAACTGGACCACCAG...AAAACAGGTTGTTTTGAATGTGATGAGCCAGCCAGGAGATAGAATACTACCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310823.8
CDS-3UTR CCA 90 bp CTGTTGCAGCAGGTGTCGTTGTTCAGATACATGATGCCAGGATCACACTCTTCTTGGGGTCTTCCTGGATaGTGTCCATTCTCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: LLQQVSLFRYMMPGSHSSWGLPG*CPFSGG
Trigger: ACCACCAGAGAATGGACACCATCCAGGAAGACCCCA...AGAAGAGTGTGATCCTGGCATCATGTATCTGAACAACGACACCTGCTGCAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp GAGGCAGCCTTTTCACTTCTGGTGACCGGATGGTCCGTGAGATCCTCAAATGACGATCCTCAAATGACTTaGCAGCTGTGCTGCTATTTG +
Preference number: 4 (lower is better)
Translates to: EAAFSLLVTGWSVRSSNDDPQMT*QLCCYL
Trigger: CAAATAGCAGCACAGCTGCCAAGTCATTTGAGGATC...GTCATTTGAGGATCTCACGGACCATCCGGTCACCAGAAGTGAAAAGGCTGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp GTTCCCTCTCGCAGAAAGGGATGCATTTCCCATCCTTACACTTGCCAAGATCCACTTCTGGTGACCGGATaGTCCGTGAGATCCTCAAAT +
Preference number: 4 (lower is better)
Translates to: VPSRRKGCISHPYTCQDPLLVTG*SVRSSN
Trigger: ATTTGAGGATCTCACGGACCATCCGGTCACCAGAAG...TGGATCTTGGCAAGTGTAAGGATGGGAAATGCATCCCTTTCTGCGAGAGGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR CAA 72 bp TCCTTCAACGTGCAGTCGCTGTTGCAGCAGGTGTCGTaGTTCAGATACATGATGCCAGGATCACACTCTTCT +
Preference number: 4 (lower is better)
Translates to: SFNVQSLLQQVS*FRYMMPGSHSS
Trigger: AGAAGAGTGTGATCCTGGCATCATGTATCTGAACAACGACACCTGCTGCAACAGCGACTGCACGTTGAAGGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp CAAGCAAACAGTGTCATCTTCAGCATTTCCTGGAGGCGGGCACTCACTGCTATTCAACCACGTGTCCAGTaGAGAAGTCCTGCCATTTTA +
Preference number: 4 (lower is better)
Translates to: QANSVIFSISWRRALTAIQPRVQ*RSPAIL
Trigger: TAAAATGGCAGGACTTCTTCACTGGACACGTGGTTG...AATAGCAGTGAGTGCCCGCCTCCAGGAAATGCTGAAGATGACACTGTTTGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp GAACCGATGCAGAATCCATGCTGCTCAGCATTTCGACGTTACTGGGGTGAAACACAACCACGTGTCCAGTaGAGAAGTCCTGCCATTTTA +
Preference number: 4 (lower is better)
Translates to: EPMQNPCCSAFRRYWGETQPRVQ*RSPAIL
Trigger: TAAAATGGCAGGACTTCTTCACTGGACACGTGGTTG...TGTTTCACCCCAGTAACGTCGAAATGCTGAGCAGCATGGATTCTGCATCGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp GTTCCTGTCACTGCACTGGACACCTTCCTTCAACGTGCAGTCGCTGTTGCAGCATGGAGACTGCAAACGTaGAACATTCTTGATATCTTC +
Preference number: 4 (lower is better)
Translates to: VPVTALDTFLQRAVAVAAWRLQT*NILDIF
Trigger: GAAGATATCAAGAATGTTTCACGTTTGCAGTCTCCA...TGCTGCAACAGCGACTGCACGTTGAAGGAAGGTGTCCAGTGCAGTGACAGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp CCCTGGTCCTCATTCGGGGCACATTCTGCTAGACCATCCGGATCATGTTCTGCTCAAAATCTTGGTATGTaGAAAGGTGTGCCAAGCAAA +
Preference number: 4 (lower is better)
Translates to: PWSSFGAHSARPSGSCSAQNLGM*KGVPSK
Trigger: TTTGCTTGGCACACCTTTTCACATACCAAGATTTTG...AGCAGAACATGATCCGGATGGTCTAGCAGAATGTGCCCCGAATGAGGACCAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp ACTCCAGCTGCTGTTCCCTCTCGCAGAAAGGGATGCATTTCCCATCCTTACACTCGTTGTTCAGATACATaGTGCCAGGATCACACTCTT +
Preference number: 4 (lower is better)
Translates to: TPAAVPSRRKGCISHPYTRCSDT*CQDHTL
Trigger: AAGAGTGTGATCCTGGCATCATGTATCTGAACAACG...AGTGTAAGGATGGGAAATGCATCCCTTTCTGCGAGAGGGAACAGCAGCTGGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp TTCAGCATTTCCTGGAGGCGGGCACTCACTGCTATTACCTGTGCAGTAGGACACTGCTCAGCTGGTCAATaGAATCCCAAAATCGTTCAA +
Preference number: 4 (lower is better)
Translates to: FSISWRRALTAITCAVGHCSAGQ*NPKIVQ
Trigger: TTGAACGATTTTGGGATTTCATTGACCAGCTGAGCA...GTGTCCTACTGCACAGGTAATAGCAGTGAGTGCCCGCCTCCAGGAAATGCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp CGTCCATATGTGAGTCTGTGCTGGGGTCTTCCTGGATGGTGTCCATTCTCTGGTTGCTCAGCTGGTCAATaGAATCCCAAAATCGTTCAA +
Preference number: 4 (lower is better)
Translates to: RPYVSLCWGLPGWCPFSGCSAGQ*NPKIVQ
Trigger: TTGAACGATTTTGGGATTTCATTGACCAGCTGAGCA...ACCAGAGAATGGACACCATCCAGGAAGACCCCAGCACAGACTCACATATGGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp GTTCCTGTCACTGCACTGGACACCTTCCTTCAACGTGCAGTCGCTGTTGCAGCAGTATGTGAAAAGGTGTaGCAAGCAAACTTTAGATGC +
Preference number: 4 (lower is better)
Translates to: VPVTALDTFLQRAVAVAAVCEKV*QANFRC
Trigger: GCATCTAAAGTTTGCTTGGCACACCTTTTCACATAC...TGCTGCAACAGCGACTGCACGTTGAAGGAAGGTGTCCAGTGCAGTGACAGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp AATAAGCCTTTGGACAAACACCTCCATGGCTGTTTGCTCTGGGAGAGCCAACATACCTCCATGGCTGTTTaGTCTGGGAGAGCCAACATA +
Preference number: 4 (lower is better)
Translates to: NKPLDKHLHGCLLWESQHTSMAV*SGRANI
Trigger: TATGTTGGCTCTCCCAGAGCAAACAGCCATGGAGGT...ATGTTGGCTCTCCCAGAGCAAACAGCCATGGAGGTGTTTGTCCAAAGGCTTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp GGAAAGGGTTTGATAATGCGAACCGATGCAGAATCCATGCTGCTCAGCATTTCGACCTCCATGGCTGTTTaGTCTGGGAGAGCCAACATA +
Preference number: 4 (lower is better)
Translates to: GKGLIMRTDAESMLLSISTSMAV*SGRANI
Trigger: TATGTTGGCTCTCCCAGAGCAAACAGCCATGGAGGT...CGAAATGCTGAGCAGCATGGATTCTGCATCGGTTCGCATTATCAAACCCTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp TGTCACTGCACTGGACACCTTCCTTCAACGTGCAGTCGCTGTTGCAGCAGGTGTATCCGGATCATGTTCTaGTCCAAAATTATGTCCCAA +
Preference number: 4 (lower is better)
Translates to: CHCTGHLPSTCSRCCSRCIRIMF*SKIMSQ
Trigger: TTGGGACATAATTTTGGAGCAGAACATGATCCGGAT...ACACCTGCTGCAACAGCGACTGCACGTTGAAGGAAGGTGTCCAGTGCAGTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp GGAAAGGGTTTGATAATGCGAACCGATGCAGAATCCATGCTGCTCAGCATTTCGGACTGTTCCTGTCACTaGACTGGACACCTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: GKGLIMRTDAESMLLSISDCSCH*TGHLPS
Trigger: TGAAGGAAGGTGTCCAGTGCAGTGACAGGAACAGTC...CGAAATGCTGAGCAGCATGGATTCTGCATCGGTTCGCATTATCAAACCCTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp GCACATTCTGCTAGACCATCCGGATCATGTTCTGCTCCAAAATTATGTCCCAATGAGGCGGGCACTCACTaGTATTACCTGTGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: AHSARPSGSCSAPKLCPNEAGTH*YYLCSR
Trigger: CCTACTGCACAGGTAATAGCAGTGAGTGCCCGCCTC...ATTGGGACATAATTTTGGAGCAGAACATGATCCGGATGGTCTAGCAGAATGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp ACCTTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCGAGGCGGGCACTCACTaGTATTACCTGTGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: TLPFQKEKGQTTQELFTCEAGTH*YYLCSR
Trigger: CCTACTGCACAGGTAATAGCAGTGAGTGCCCGCCTC...GCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp TTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGGCACAGGACTCCAGCTaGTGTTCCCTCTCGCAGAAA +
Preference number: 4 (lower is better)
Translates to: LPFQKEKGQTTQELFTCRAQDSS*CSLSQK
Trigger: TTTCTGCGAGAGGGAACAGCAGCTGGAGTCCTGTGC...CCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp TACCTCTTGTGGAGACTTGAGAATGCGAATCTGCTCTATCTGTATTCCATAGCCGCACAGGACTCCAGCTaGTGTTCCCTCTCGCAGAAA +
Preference number: 4 (lower is better)
Translates to: YLLWRLENANLLYLYSIAAQDSS*CSLSQK
Trigger: TTTCTGCGAGAGGGAACAGCAGCTGGAGTCCTGTGC...GGCTATGGAATACAGATAGAGCAGATTCGCATTCTCAAGTCTCCACAAGAGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp TGCAGGAGTTGTCAGTTTCATTACATGCACAGGACTCCAGCTGCTGTTCCCTCTGTCAGTTTCATTACATaGACAGGACTCCAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: CRSCQFHYMHRTPAAVPSVSFIT*TGLQLL
Trigger: CAGCAGCTGGAGTCCTGTGCATGTAATGAAACTGAC...AGAGGGAACAGCAGCTGGAGTCCTGTGCATGTAATGAAACTGACAACTCCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp AAGGTCCCTGCAGCACACCTTGCAGGAGTTGTCAGTTTCATTACATGCACAGGAGTCAGTTTCATTACATaGACAGGACTCCAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: KVPAAHLAGVVSFITCTGVSFIT*TGLQLL
Trigger: CAGCAGCTGGAGTCCTGTGCATGTAATGAAACTGAC...TCCTGTGCATGTAATGAAACTGACAACTCCTGCAAGGTGTGCTGCAGGGACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp CTGTTGCAGCAGGTGTCGTTGTTCAGATACATGATGCCAGGATCACACTCTTCTCCCTGCAGCACACCTTaGAGGAGTTGTCAGTTTCAT +
Preference number: 4 (lower is better)
Translates to: LLQQVSLFRYMMPGSHSSPCSTP*RSCQFH
Trigger: ATGAAACTGACAACTCCTGCAAGGTGTGCTGCAGGG...AGAAGAGTGTGATCCTGGCATCATGTATCTGAACAACGACACCTGCTGCAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp CCAATAATTTACACGTGTTCTTCATGGGATCTGGGTCAGCTCTTCTTTTCACTCGGCCAGAAAGGTCCCTaGAGCACACCTTGCAGGAGT +
Preference number: 4 (lower is better)
Translates to: PIIYTCSSWDLGQLFFSLGQKGP*STPCRS
Trigger: ACTCCTGCAAGGTGTGCTGCAGGGACCTTTCTGGCC...GAGTGAAAAGAAGAGCTGACCCAGATCCCATGAAGAACACGTGTAAATTATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp GCACAGGACTCCAGCTGCTGTTCCCTCTCGCAGAAAGGGATGCATTTCCCATCCCTCGTTTCTCACATTTaGCATTCATGTCACAAAATC +
Preference number: 4 (lower is better)
Translates to: AQDSSCCSLSQKGMHFPSLVSHI*HSCHKI
Trigger: GATTTTGTGACATGAATGGCAAATGTGAGAAACGAG...GGATGGGAAATGCATCCCTTTCTGCGAGAGGGAACAGCAGCTGGAGTCCTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp TGGGTCAGCTCTTCTTTTCACTCGATGAACAAGCTCTTCAGGTGGTTCTCTGTCCCGATGCAGAATCCATaGTGCTCAGCATTTCGACGT +
Preference number: 4 (lower is better)
Translates to: WVSSSFHSMNKLFRWFSVPMQNP*CSAFRR
Trigger: ACGTCGAAATGCTGAGCAGCATGGATTCTGCATCGG...GACAGAGAACCACCTGAAGAGCTTGTTCATCGAGTGAAAAGAAGAGCTGACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647979.1
ENST00000649227.1
CDS-3UTR GCA 90 bp CTACCACCAATAATTTACACGTGTTCTTCATGGGATCTGGGTCAGCTCTTCTTTGTCCAGTTTTGGAGCTaGTGGCGCCGAAGGGATCAC +
Preference number: 4 (lower is better)
Translates to: LPPIIYTCSSWDLGQLFFVQFWS*WRRRDH
Trigger: GTGATCCCTTCGGCGCCAGCAGCTCCAAAACTGGAC...AAAGAAGAGCTGACCCAGATCCCATGAAGAACACGTGTAAATTATTGGTGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp CATCCACCCTCGAGTTCCCACAAACTTTATTGCTGCGTTCTTGAAAACACTCCTCCATATGTGAGTCTGTaGTGGGGTCTTCCTGGATGG +
Preference number: 4 (lower is better)
Translates to: HPPSSSHKLYCCVLENTPPYVSL*WGLPGW
Trigger: CCATCCAGGAAGACCCCAGCACAGACTCACATATGG...AGGAGTGTTTTCAAGAACGCAGCAATAAAGTTTGTGGGAACTCGAGGGTGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp AGGACTCCAGCTGCTGTTCCCTCTCGCAGAAAGGGATGCATTTCCCATCCTTACAGCACTCTGTTTCTTTaGTGTCAACACGATTCTGAC +
Preference number: 4 (lower is better)
Translates to: RTPAAVPSRRKGCISHPYSTLFL*CQHDSD
Trigger: GTCAGAATCGTGTTGACAGCAAAGAAACAGAGTGCT...GTAAGGATGGGAAATGCATCCCTTTCTGCGAGAGGGAACAGCAGCTGGAGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp TTGACAATAAACAGGCTGCAGAGACTTACTTTTCACTGGCTTTTGTACTGTGTATTCTCGAGTCTCTGGTaGGGGCCGAAGCCCGGGTCA +
Preference number: 4 (lower is better)
Translates to: LTINRLQRLTFHWLLYCVFSSLW*GPKPGS
Trigger: TGACCCGGGCTTCGGCCCCCACCAGAGACTCGAGAA...TACACAGTACAAAAGCCAGTGAAAAGTAAGTCTCTGCAGCCTGTTTATTGTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000618923.2
CDS-3UTR CCA 90 bp ACAGGACTCCAGCTGCTGTTCCCTCTCGCAGAAAGGGATGCATTTCCCATCCTTTCATCATCTCTTATGTaGGCTAGAACCCTAGAGTCA +
Preference number: 4 (lower is better)
Translates to: TGLQLLFPLAERDAFPILSSSLM*ARTLES
Trigger: TGACTCTAGGGTTCTAGCCCACATAAGAGATGATGA...AAGGATGGGAAATGCATCCCTTTCTGCGAGAGGGAACAGCAGCTGGAGTCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp TATGGGATACATGACATATTTCCCTCCCTGGTCCTCATTCGGGGCACATTCTGCTACACGTGTTCTTCATaGGATCTGGGTCAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: YGIHDIFPSLVLIRGTFCYTCSS*DLGQLF
Trigger: GAAGAGCTGACCCAGATCCCATGAAGAACACGTGTA...GCAGAATGTGCCCCGAATGAGGACCAGGGAGGGAAATATGTCATGTATCCCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp GCTATTACCTGTGCAGTAGGACACGCCTTTGCAAGTAGCATTAATCGCCTCCTGTACACGTGTTCTTCATaGGATCTGGGTCAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: AITCAVGHAFASSINRLLYTCSS*DLGQLF
Trigger: GAAGAGCTGACCCAGATCCCATGAAGAACACGTGTA...CAGGAGGCGATTAATGCTACTTGCAAAGGCGTGTCCTACTGCACAGGTAATAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp TGCAGGAGTTGTCAGTTTCATTACATGCACAGGACTCCAGCTGCTGTTCCCTCTCATGGCTGTTTGCTCTaGGAGAGCCAACATAAGCTA +
Preference number: 4 (lower is better)
Translates to: CRSCQFHYMHRTPAAVPSHGCLL*ESQHKL
Trigger: TAGCTTATGTTGGCTCTCCCAGAGCAAACAGCCATG...AGAGGGAACAGCAGCTGGAGTCCTGTGCATGTAATGAAACTGACAACTCCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp CTGTTGCAGCAGGTGTCGTTGTTCAGATACATGATGCCAGGATCACACTCTTCTACATATTTCCCTCCCTaGTCCTCATTCGGGGCACAT +
Preference number: 4 (lower is better)
Translates to: LLQQVSLFRYMMPGSHSSTYFPP*SSFGAH
Trigger: ATGTGCCCCGAATGAGGACCAGGGAGGGAAATATGT...AGAAGAGTGTGATCCTGGCATCATGTATCTGAACAACGACACCTGCTGCAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp AATAAGCCTTTGGACAAACACCTCCATGGCTGTTTGCTCTGGGAGAGCCAACATTTCCTGTCACTGCACTaGACACCTTCCTTCAACGTG +
Preference number: 4 (lower is better)
Translates to: NKPLDKHLHGCLLWESQHFLSLH*TPSFNV
Trigger: CACGTTGAAGGAAGGTGTCCAGTGCAGTGACAGGAA...ATGTTGGCTCTCCCAGAGCAAACAGCCATGGAGGTGTTTGTCCAAAGGCTTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp TGCAGGAGTTGTCAGTTTCATTACATGCACAGGACTCCAGCTGCTGTTCCCTCTGCATTTCGACGTTACTaGGGTGAAACAGAGACAGAG +
Preference number: 4 (lower is better)
Translates to: CRSCQFHYMHRTPAAVPSAFRRY*GETETE
Trigger: CTCTGTCTCTGTTTCACCCCAGTAACGTCGAAATGC...AGAGGGAACAGCAGCTGGAGTCCTGTGCATGTAATGAAACTGACAACTCCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp CACAAACTTTATTGCTGCGTTCTTGAAAACACTCCTGGGCCTTACTTTCAATGGCAGTTTTGGAGCTGCTaGCGCCGAAGGGATCACAGG +
Preference number: 4 (lower is better)
Translates to: HKLYCCVLENTPGPYFQWQFWSC*RRRDHR
Trigger: CCTGTGATCCCTTCGGCGCCAGCAGCTCCAAAACTG...CCATTGAAAGTAAGGCCCAGGAGTGTTTTCAAGAACGCAGCAATAAAGTTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp CTACCACCAATAATTTACACGTGTTCTTCATGGGATCTGGGTCAGCTCTTCTTTCAGTTTTGGAGCTGCTaGCGCCGAAGGGATCACAGG +
Preference number: 4 (lower is better)
Translates to: LPPIIYTCSSWDLGQLFFQFWSC*RRRDHR
Trigger: CCTGTGATCCCTTCGGCGCCAGCAGCTCCAAAACTG...AAAGAAGAGCTGACCCAGATCCCATGAAGAACACGTGTAAATTATTGGTGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp AAGGTCCCTGCAGCACACCTTGCAGGAGTTGTCAGTTTCATTACATGCACAGGAATGGTGTCCATTCTCTaGTGGTCCAGTTTTGGAGCT +
Preference number: 4 (lower is better)
Translates to: KVPAAHLAGVVSFITCTGMVSIL*WSSFGA
Trigger: AGCTCCAAAACTGGACCACCAGAGAATGGACACCAT...TCCTGTGCATGTAATGAAACTGACAACTCCTGCAAGGTGTGCTGCAGGGACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp TGCAGGAGTTGTCAGTTTCATTACATGCACAGGACTCCAGCTGCTGTTCCCTCTATGGTGTCCATTCTCTaGTGGTCCAGTTTTGGAGCT +
Preference number: 4 (lower is better)
Translates to: CRSCQFHYMHRTPAAVPSMVSIL*WSSFGA
Trigger: AGCTCCAAAACTGGACCACCAGAGAATGGACACCAT...AGAGGGAACAGCAGCTGGAGTCCTGTGCATGTAATGAAACTGACAACTCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp CAGAATCCATGCTGCTCAGCATTTCGACGTTACTGGGGTGAAACAGAGACAGAGATGGTGTCCATTCTCTaGTGGTCCAGTTTTGGAGCT +
Preference number: 4 (lower is better)
Translates to: QNPCCSAFRRYWGETETEMVSIL*WSSFGA
Trigger: AGCTCCAAAACTGGACCACCAGAGAATGGACACCAT...CTCTGTCTCTGTTTCACCCCAGTAACGTCGAAATGCTGAGCAGCATGGATTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp ATTGTTCTCGTGATCGCCACTCACAGCTATGGGATACATGACATATTTCCCTCCTGGGGTCTTCCTGGATaGTGTCCATTCTCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: IVLVIATHSYGIHDIFPSWGLPG*CPFSGG
Trigger: ACCACCAGAGAATGGACACCATCCAGGAAGACCCCA...GGAGGGAAATATGTCATGTATCCCATAGCTGTGAGTGGCGATCACGAGAACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp ACCTTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCGTGCTGGGGTCTTCCTaGATGGTGTCCATTCTCTGG +
Preference number: 4 (lower is better)
Translates to: TLPFQKEKGQTTQELFTCVLGSS*MVSILW
Trigger: CCAGAGAATGGACACCATCCAGGAAGACCCCAGCAC...GCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp CACCTTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGGTGCTGGGGTCTTCCTaGATGGTGTCCATTCTCTGG +
Preference number: 4 (lower is better)
Translates to: HLTFSKGEGPNHTRTVYLVLGSS*MVSILW
Trigger: CCAGAGAATGGACACCATCCAGGAAGACCCCAGCAC...CAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp GTCCCTGCAGCACACCTTGCAGGAGTTGTCAGTTTCATTACATGCACAGGACTCGATCCTCAAATGACTTaGCAGCTGTGCTGCTATTTG +
Preference number: 4 (lower is better)
Translates to: VPAAHLAGVVSFITCTGLDPQMT*QLCCYL
Trigger: CAAATAGCAGCACAGCTGCCAAGTCATTTGAGGATC...GAGTCCTGTGCATGTAATGAAACTGACAACTCCTGCAAGGTGTGCTGCAGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp CCCTGGTCCTCATTCGGGGCACATTCTGCTAGACCATCCGGATCATGTTCTGCTTTCCATAAATTCAACTaGCTACCATGTATAGCCCTC +
Preference number: 4 (lower is better)
Translates to: PWSSFGAHSARPSGSCSAFHKFN*LPCIAL
Trigger: GAGGGCTATACATGGTAGCCAGTTGAATTTATGGAA...AGCAGAACATGATCCGGATGGTCTAGCAGAATGTGCCCCGAATGAGGACCAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649227.1
CDS-3UTR TCA 90 bp TACTGTGAAATGAAAAAGCAAGGTGTAAAAGTGTACTGCATAGCACCGTTGTGTTGGGCAGCCTTCGCCTaGCGGGGTTTCGGAAAACTG +
Preference number: 4 (lower is better)
Translates to: YCEMKKQGVKVYCIAPLCWAAFA*RGFGKL
Trigger: CAGTTTTCCGAAACCCCGTCAGGCGAAGGCTGCCCA...ACACAACGGTGCTATGCAGTACACTTTTACACCTTGCTTTTTCATTTCACAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000618923.2
CDS-3UTR TCA 90 bp AAGGGGTCCTTCTCAAACCCATCCTCGTCCATATGTGAGTCTGTGCTGGGGTCTCAAAATCTTGGTATGTaGAAAGGTGTGCCAAGCAAA +
Preference number: 4 (lower is better)
Translates to: KGSFSNPSSSICESVLGSQNLGM*KGVPSK
Trigger: TTTGCTTGGCACACCTTTTCACATACCAAGATTTTG...AGACCCCAGCACAGACTCACATATGGACGAGGATGGGTTTGAGAAGGACCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp GCTGTCAACACGATTCTGACGCTGCAGTTTAAAGGAGGCAGCCTTTTCACTTCTTCGACGTTACTGGGGTaGAACAGAGACAGAGATTCA +
Preference number: 4 (lower is better)
Translates to: AVNTILTLQFKGGSLFTSSTLLG*NRDRDS
Trigger: TGAATCTCTGTCTCTGTTTCACCCCAGTAACGTCGA...AGAAGTGAAAAGGCTGCCTCCTTTAAACTGCAGCGTCAGAATCGTGTTGACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp CAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAAATCCTCGTCCATATGTaGGTCTGTGCTGGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: QKEKGQTTQELFTCRKFKILVHM*VCAGVF
Trigger: GAAGACCCCAGCACAGACTCACATATGGACGAGGAT...TTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp CTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAAGTATCCTCGTCCATATGTaGGTCTGTGCTGGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: LFKRRRAKPHKNCLPAGSILVHM*VCAGVF
Trigger: GAAGACCCCAGCACAGACTCACATATGGACGAGGAT...ACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp TTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGCGTGAGATCCTCAAATaGCTTGGCAGCTGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LPFQKEKGQTTQELFTCRREILK*LGSCAA
Trigger: AGCAGCACAGCTGCCAAGTCATTTGAGGATCTCACG...CCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp CAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAACGTGAGATCCTCAAATaGCTTGGCAGCTGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: QKEKGQTTQELFTCRKFKREILK*LGSCAA
Trigger: AGCAGCACAGCTGCCAAGTCATTTGAGGATCTCACG...TTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp GGTTTGACAATAAACAGGCTGCAGAGACTTACTTTTCACTGGCTTTTGTACTGTAGGAATAGGAGAGACTaGCTCATGTTCCCGGCCCCG +
Preference number: 4 (lower is better)
Translates to: GLTINRLQRLTFHWLLYCRNRRD*LMFPAP
Trigger: CGGGGCCGGGAACATGAGGCAGTCTCTCCTATTCCT...ACAGTACAAAAGCCAGTGAAAAGTAAGTCTCTGCAGCCTGTTTATTGTCAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000618923.2
CDS-3UTR GCA 90 bp CCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAAGACCTCCATGGCTGTTTaGTCTGGGAGAGCCAACATA +
Preference number: 4 (lower is better)
Translates to: PFQKEKGQTTQELFTCRKTSMAV*SGRANI
Trigger: TATGTTGGCTCTCCCAGAGCAAACAGCCATGGAGGT...CTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp TGTCACTGCACTGGACACCTTCCTTCAACGTGCAGTCGCTGTTGCAGCAGGTGTCACAAACTTTATTGCTaGGTTCTTGAAAACACTCCT +
Preference number: 4 (lower is better)
Translates to: CHCTGHLPSTCSRCCSRCHKLYC*VLENTP
Trigger: AGGAGTGTTTTCAAGAACGCAGCAATAAAGTTTGTG...ACACCTGCTGCAACAGCGACTGCACGTTGAAGGAAGGTGTCCAGTGCAGTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp CACAGGACTCCAGCTGCTGTTCCCTCTCGCAGAAAGGGATGCATTTCCCATCCTTCCCACAAACTTTATTaGTGCGTTCTTGAAAACACT +
Preference number: 4 (lower is better)
Translates to: HRTPAAVPSRRKGCISHPSHKLY*CVLENT
Trigger: AGTGTTTTCAAGAACGCAGCAATAAAGTTTGTGGGA...AGGATGGGAAATGCATCCCTTTCTGCGAGAGGGAACAGCAGCTGGAGTCCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp CCAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAACACATGACCAGCATACGTGCAGTCGCTGTTaGAGCAGGTGTCGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: PNHTRTVYLQEVQTHDQHTCSRC*SRCRCS
Trigger: TGAACAACGACACCTGCTGCAACAGCGACTGCACGT...ATGCTGGTCATGTGTTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp ACCTTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCACGTGCAGTCGCTGTTaGAGCAGGTGTCGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: TLPFQKEKGQTTQELFTCTCSRC*SRCRCS
Trigger: TGAACAACGACACCTGCTGCAACAGCGACTGCACGT...GCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp TGCTGCGTTCTTGAAAACACTCCTGGGCCTTACTTTCAATGGTCTTATAGATTGCACCTTCCTTCAACGTaGAGTCGCTGTTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: CCVLENTPGPYFQWSYRLHLPST*SRCCSR
Trigger: CCTGCTGCAACAGCGACTGCACGTTGAAGGAAGGTG...CAATCTATAAGACCATTGAAAGTAAGGCCCAGGAGTGTTTTCAAGAACGCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp CTGAGAACTAAATTAGCACTCTGTTTCTTTGCTGTCAACACGATTCTGACGCTGCACCTTCCTTCAACGTaGAGTCGCTGTTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LRTKLALCFFAVNTILTLHLPST*SRCCSR
Trigger: CCTGCTGCAACAGCGACTGCACGTTGAAGGAAGGTG...CAGCGTCAGAATCGTGTTGACAGCAAAGAAACAGAGTGCTAATTTAGTTCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp CCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAAGCACTGCTATTACCTGTaGAGTAGGACACGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: PFQKEKGQTTQELFTCRKHCYYL*SRTRLC
Trigger: GCAAAGGCGTGTCCTACTGCACAGGTAATAGCAGTG...CTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp TGCCATGTTGTAGTGCTTTTCACCAGGTTTTACCTCTTGTGGAGACTTGAGAATGAGGCGGGCACTCACTaGTATTACCTGTGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: CHVVVLFTRFYLLWRLENEAGTH*YYLCSR
Trigger: CCTACTGCACAGGTAATAGCAGTGAGTGCCCGCCTC...ATTCTCAAGTCTCCACAAGAGGTAAAACCTGGTGAAAAGCACTACAACATGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp GTTCCCTCTCGCAGAAAGGGATGCATTTCCCATCCTTACACTTGCCAAGATCCATCTCGCAGAAAGGGATaGATTTCCCATCCTTACACT +
Preference number: 4 (lower is better)
Translates to: VPSRRKGCISHPYTCQDPSRRKG*ISHPYT
Trigger: AGTGTAAGGATGGGAAATGCATCCCTTTCTGCGAGA...TGGATCTTGGCAAGTGTAAGGATGGGAAATGCATCCCTTTCTGCGAGAGGGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp CATCCACCCTCGAGTTCCCACAAACTTTATTGCTGCGTTCTTGAAAACACTCCTCCCTGCAGCACACCTTaGAGGAGTTGTCAGTTTCAT +
Preference number: 4 (lower is better)
Translates to: HPPSSSHKLYCCVLENTPPCSTP*RSCQFH
Trigger: ATGAAACTGACAACTCCTGCAAGGTGTGCTGCAGGG...AGGAGTGTTTTCAAGAACGCAGCAATAAAGTTTGTGGGAACTCGAGGGTGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp TGGGTCAGCTCTTCTTTTCACTCGATGAACAAGCTCTTCAGGTGGTTCTCTGTCGATAATGCGAACCGATaGAGAATCCATGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: WVSSSFHSMNKLFRWFSVDNANR*RIHAAQ
Trigger: CTGAGCAGCATGGATTCTGCATCGGTTCGCATTATC...GACAGAGAACCACCTGAAGAGCTTGTTCATCGAGTGAAAAGAAGAGCTGACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647979.1
ENST00000649227.1
CDS-3UTR GCA 90 bp ATCTTCAGCATTTCCTGGAGGCGGGCACTCACTGCTATTACCTGTGCAGTAGGATCCAGCTGTATTTTCTaGTTTTGCACCACAGGTCAA +
Preference number: 4 (lower is better)
Translates to: IFSISWRRALTAITCAVGSSCIF*FCTTGQ
Trigger: TTGACCTGTGGTGCAAAAGCAGAAAATACAGCTGGA...TCCTACTGCACAGGTAATAGCAGTGAGTGCCCGCCTCCAGGAAATGCTGAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp ACTCCAGCTGCTGTTCCCTCTCGCAGAAAGGGATGCATTTCCCATCCTTACACTTCCAGCTGTATTTTCTaGTTTTGCACCACAGGTCAA +
Preference number: 4 (lower is better)
Translates to: TPAAVPSRRKGCISHPYTSSCIF*FCTTGQ
Trigger: TTGACCTGTGGTGCAAAAGCAGAAAATACAGCTGGA...AGTGTAAGGATGGGAAATGCATCCCTTTCTGCGAGAGGGAACAGCAGCTGGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp AAGGTCCCTGCAGCACACCTTGCAGGAGTTGTCAGTTTCATTACATGCACAGGAGTTCTTCATGGGATCTaGGTCAGCTCTTCTTTTCAC +
Preference number: 4 (lower is better)
Translates to: KVPAAHLAGVVSFITCTGVLHGI*VSSSFH
Trigger: GTGAAAAGAAGAGCTGACCCAGATCCCATGAAGAAC...TCCTGTGCATGTAATGAAACTGACAACTCCTGCAAGGTGTGCTGCAGGGACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp GTCCCTGCAGCACACCTTGCAGGAGTTGTCAGTTTCATTACATGCACAGGACTCGCTATAATAAGCCTTTaGACAAACACCTCCATGGCT +
Preference number: 4 (lower is better)
Translates to: VPAAHLAGVVSFITCTGLAIISL*TNTSMA
Trigger: AGCCATGGAGGTGTTTGTCCAAAGGCTTATTATAGC...GAGTCCTGTGCATGTAATGAAACTGACAACTCCTGCAAGGTGTGCTGCAGGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp ACTCCAGCTGCTGTTCCCTCTCGCAGAAAGGGATGCATTTCCCATCCTTACACTGCTATAATAAGCCTTTaGACAAACACCTCCATGGCT +
Preference number: 4 (lower is better)
Translates to: TPAAVPSRRKGCISHPYTAIISL*TNTSMA
Trigger: AGCCATGGAGGTGTTTGTCCAAAGGCTTATTATAGC...AGTGTAAGGATGGGAAATGCATCCCTTTCTGCGAGAGGGAACAGCAGCTGGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp CCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCCTGTCACTGCACTaGACACCTTCCTTCAACGTG +
Preference number: 4 (lower is better)
Translates to: PFQKEKGQTTQELFTCRKFLSLH*TPSFNV
Trigger: CACGTTGAAGGAAGGTGTCCAGTGCAGTGACAGGAA...CTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp TTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGGCATTAATCGCCTCCTaGCACTTCTTCTGGGCAGTC +
Preference number: 4 (lower is better)
Translates to: LPFQKEKGQTTQELFTCRALIAS*HFFWAV
Trigger: GACTGCCCAGAAGAAGTGCCAGGAGGCGATTAATGC...CCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp ACCTTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCGCATTAATCGCCTCCTaGCACTTCTTCTGGGCAGTC +
Preference number: 4 (lower is better)
Translates to: TLPFQKEKGQTTQELFTCALIAS*HFFWAV
Trigger: GACTGCCCAGAAGAAGTGCCAGGAGGCGATTAATGC...GCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp ACTGTTTACCTGCAGGAAGTTCAAACACATGACCAGCATCTGCTAAGTCACTTCGCATTAATCGCCTCCTaGCACTTCTTCTGGGCAGTC +
Preference number: 4 (lower is better)
Translates to: TVYLQEVQTHDQHLLSHFALIAS*HFFWAV
Trigger: GACTGCCCAGAAGAAGTGCCAGGAGGCGATTAATGC...GAAGTGACTTAGCAGATGCTGGTCATGTGTTTGAACTTCCTGCAGGTAAACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp TCCCTCCCTGGTCCTCATTCGGGGCACATTCTGCTAGACCATCCGGATCATGTTGTATTGATGCTCAGCTaGTCAATGAAATCCCAAAAT +
Preference number: 4 (lower is better)
Translates to: SLPGPHSGHILLDHPDHVVLMLS*SMKSQN
Trigger: ATTTTGGGATTTCATTGACCAGCTGAGCATCAATAC...AACATGATCCGGATGGTCTAGCAGAATGTGCCCCGAATGAGGACCAGGGAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp TGTCACTGCACTGGACACCTTCCTTCAACGTGCAGTCGCTGTTGCAGCAGGTGTGTATTGATGCTCAGCTaGTCAATGAAATCCCAAAAT +
Preference number: 4 (lower is better)
Translates to: CHCTGHLPSTCSRCCSRCVLMLS*SMKSQN
Trigger: ATTTTGGGATTTCATTGACCAGCTGAGCATCAATAC...ACACCTGCTGCAACAGCGACTGCACGTTGAAGGAAGGTGTCCAGTGCAGTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp CTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAAGTTGGGGTCTTCCTGGATaGTGTCCATTCTCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: LFKRRRAKPHKNCLPAGSWGLPG*CPFSGG
Trigger: ACCACCAGAGAATGGACACCATCCAGGAAGACCCCA...ACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp CCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAAGTATGTGAGTCTGTGCTaGGGTCTTCCTGGATGGTGT +
Preference number: 4 (lower is better)
Translates to: PFQKEKGQTTQELFTCRKYVSLC*GLPGWC
Trigger: ACACCATCCAGGAAGACCCCAGCACAGACTCACATA...CTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp GCTATTACCTGTGCAGTAGGACACGCCTTTGCAAGTAGCATTAATCGCCTCCTGGATCCTCAAATGACTTaGCAGCTGTGCTGCTATTTG +
Preference number: 4 (lower is better)
Translates to: AITCAVGHAFASSINRLLDPQMT*QLCCYL
Trigger: CAAATAGCAGCACAGCTGCCAAGTCATTTGAGGATC...CAGGAGGCGATTAATGCTACTTGCAAAGGCGTGTCCTACTGCACAGGTAATAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp AAGGTCCCTGCAGCACACCTTGCAGGAGTTGTCAGTTTCATTACATGCACAGGAGATCCTCAAATGACTTaGCAGCTGTGCTGCTATTTG +
Preference number: 4 (lower is better)
Translates to: KVPAAHLAGVVSFITCTGDPQMT*QLCCYL
Trigger: CAAATAGCAGCACAGCTGCCAAGTCATTTGAGGATC...TCCTGTGCATGTAATGAAACTGACAACTCCTGCAAGGTGTGCTGCAGGGACCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp TATGGGATACATGACATATTTCCCTCCCTGGTCCTCATTCGGGGCACATTCTGCTTATGTCCCAATTCATaGGTTGTAACCAGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: YGIHDIFPSLVLIRGTFCLCPNS*VVTRSA
Trigger: AGCTGACCTGGTTACAACTCATGAATTGGGACATAA...GCAGAATGTGCCCCGAATGAGGACCAGGGAGGGAAATATGTCATGTATCCCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp CTGTTGCAGCAGGTGTCGTTGTTCAGATACATGATGCCAGGATCACACTCTTCTATCTTATTGTTCTCGTaGTCGCCACTCACAGCTATG +
Preference number: 4 (lower is better)
Translates to: LLQQVSLFRYMMPGSHSSILLFS*SPLTAM
Trigger: CATAGCTGTGAGTGGCGATCACGAGAACAATAAGAT...AGAAGAGTGTGATCCTGGCATCATGTATCTGAACAACGACACCTGCTGCAACAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp GGAAAGGGTTTGATAATGCGAACCGATGCAGAATCCATGCTGCTCAGCATTTCGTTATTGCTGCGTTCTTaGAAACACTCCTGGGCCTTA +
Preference number: 4 (lower is better)
Translates to: GKGLIMRTDAESMLLSISLLLRS*KHSWAL
Trigger: TAAGGCCCAGGAGTGTTTTCAAGAACGCAGCAATAA...CGAAATGCTGAGCAGCATGGATTCTGCATCGGTTCGCATTATCAAACCCTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp AAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAACACATGACCCTGTCAACACGATTCTaGCGCTGCAGTTTAAAGGAG +
Preference number: 4 (lower is better)
Translates to: KGQTTQELFTCRKFKHMTLSTRF*RCSLKE
Trigger: CTCCTTTAAACTGCAGCGTCAGAATCGTGTTGACAG...GGTCATGTGTTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp CCTGGCACTTCTTCTGGGCAGTCTCAAACTGACAGTTTTTACAGCAAGGACTGTGGAAGTTCAAACACATaGCCAGCATCTGCTAAGTCA +
Preference number: 4 (lower is better)
Translates to: PGTSSGQSQTDSFYSKDCGSSNT*PASAKS
Trigger: TGACTTAGCAGATGCTGGTCATGTGTTTGAACTTCC...ACAGTCCTTGCTGTAAAAACTGTCAGTTTGAGACTGCCCAGAAGAAGTGCCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp AGGCTGCAGAGACTTACTTTTCACTGGCTTTTGTACTGTGTACATGTTACCTATAGCTCAGAGTTTCTGTaGGTCTCTCTGCCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: RLQRLTFHWLLYCVHVTYSSEFL*VSLPAC
Trigger: GCAGGCAGGCAGAGAGACTCACAGAAACTCTGAGCT...ATAGGTAACATGTACACAGTACAAAAGCCAGTGAAAAGTAAGTCTCTGCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618923.2
CDS-3UTR TCA 90 bp GTCCCTGCAGCACACCTTGCAGGAGTTGTCAGTTTCATTACATGCACAGGACTCCCTCTTGTGGAGACTTaGGAATGCGAATTAAGTAAT +
Preference number: 4 (lower is better)
Translates to: VPAAHLAGVVSFITCTGLPLVET*ECELSN
Trigger: ATTACTTAATTCGCATTCTCAAGTCTCCACAAGAGG...GAGTCCTGTGCATGTAATGAAACTGACAACTCCTGCAAGGTGTGCTGCAGGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647610.1
CDS-3UTR GCA 90 bp GGAAAGGGTTTGATAATGCGAACCGATGCAGAATCCATGCTGCTCAGCATTTCGCCAGTGAAGAAGTCCTaGCATTTTACAGTGTACTCG +
Preference number: 4 (lower is better)
Translates to: GKGLIMRTDAESMLLSISPVKKS*HFTVYS
Trigger: CGAGTACACTGTAAAATGGCAGGACTTCTTCACTGG...CGAAATGCTGAGCAGCATGGATTCTGCATCGGTTCGCATTATCAAACCCTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp ACTCCAGCTGCTGTTCCCTCTCGCAGAAAGGGATGCATTTCCCATCCTTACACTCACACTTTTGGAGACTaGAAACGTGAAACATTCTTG +
Preference number: 4 (lower is better)
Translates to: TPAAVPSRRKGCISHPYTHTFGD*KRETFL
Trigger: CAAGAATGTTTCACGTTTGCAGTCTCCAAAAGTGTG...AGTGTAAGGATGGGAAATGCATCCCTTTCTGCGAGAGGGAACAGCAGCTGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp ACTCCAGCTGCTGTTCCCTCTCGCAGAAAGGGATGCATTTCCCATCCTTACACTGTATGTGAAAAGGTGTaGCAAGCAAACTTTAGATGC +
Preference number: 4 (lower is better)
Translates to: TPAAVPSRRKGCISHPYTVCEKV*QANFRC
Trigger: GCATCTAAAGTTTGCTTGGCACACCTTTTCACATAC...AGTGTAAGGATGGGAAATGCATCCCTTTCTGCGAGAGGGAACAGCAGCTGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp TCCGTGAGATCCTCAAATGACTTGGCAGCTGTGCTGCTATTTGGGAAGGGGTCCCACAAACTTTATTGCTaGGTTCTTGAAAACACTCCT +
Preference number: 4 (lower is better)
Translates to: SVRSSNDLAAVLLFGKGSHKLYC*VLENTP
Trigger: AGGAGTGTTTTCAAGAACGCAGCAATAAAGTTTGTG...GGACCCCTTCCCAAATAGCAGCACAGCTGCCAAGTCATTTGAGGATCTCACGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp CAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAACACATGACCAGCATCCACTGCTATTACCTGTaGAGTAGGACACGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: QTTQELFTCRKFKHMTSIHCYYL*SRTRLC
Trigger: GCAAAGGCGTGTCCTACTGCACAGGTAATAGCAGTG...GATGCTGGTCATGTGTTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp TTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGCACTGCTATTACCTGTaGAGTAGGACACGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: LPFQKEKGQTTQELFTCRHCYYL*SRTRLC
Trigger: GCAAAGGCGTGTCCTACTGCACAGGTAATAGCAGTG...CCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp TTGCAGCAGGTGTCGTTGTTCAGATACATGATGCCAGGATCACACTCTTCTCCTTCTCGCAGAAAGGGATaGATTTCCCATCCTTACACT +
Preference number: 4 (lower is better)
Translates to: LQQVSLFRYMMPGSHSSPSRRKG*ISHPYT
Trigger: AGTGTAAGGATGGGAAATGCATCCCTTTCTGCGAGA...AGGAGAAGAGTGTGATCCTGGCATCATGTATCTGAACAACGACACCTGCTGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp CCAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAACACATGACCAGCATCCCTGCAGCACACCTTaGAGGAGTTGTCAGTTTCAT +
Preference number: 4 (lower is better)
Translates to: PNHTRTVYLQEVQTHDQHPCSTP*RSCQFH
Trigger: ATGAAACTGACAACTCCTGCAAGGTGTGCTGCAGGG...ATGCTGGTCATGTGTTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp AAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAACACATGACCGATAATGCGAACCGATaGAGAATCCATGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: KGQTTQELFTCRKFKHMTDNANR*RIHAAQ
Trigger: CTGAGCAGCATGGATTCTGCATCGGTTCGCATTATC...GGTCATGTGTTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp TCACCTTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTCCATATGTGAGTCTGTaGTGGGGTCTTCCTGGATGG +
Preference number: 4 (lower is better)
Translates to: SPYLFKRRRAKPHKNCLPPYVSL*WGLPGW
Trigger: CCATCCAGGAAGACCCCAGCACAGACTCACATATGG...AGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAAGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp CACCTTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGATGACTTGGCAGCTGTaGTGCTATTTGGGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: HLTFSKGEGPNHTRTVYLMTWQL*CYLGRG
Trigger: ACCCCTTCCCAAATAGCAGCACAGCTGCCAAGTCAT...CAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp ACTGCACTGGACACCTTCCTTCAACGTGCAGTCGCTGTTGCAGCAGGTGTCGTTGTCATCACAAATAAATaGCAAATGCCTCATATTCAG +
Preference number: 4 (lower is better)
Translates to: TALDTFLQRAVAVAAGVVVITNK*QMPHIQ
Trigger: CTGAATATGAGGCATTTGGCATTTATTTGTGATGAC...AACGACACCTGCTGCAACAGCGACTGCACGTTGAAGGAAGGTGTCCAGTGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647979.1
ENST00000649227.1
CDS-3UTR CCA 90 bp CAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAACGAAAGGAACCACGCTaGTCAGGAATAGGAGAGACT +
Preference number: 4 (lower is better)
Translates to: QKEKGQTTQELFTCRKFKRKEPR*SGIGET
Trigger: AGTCTCTCCTATTCCTGACCAGCGTGGTTCCTTTCG...TTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp CCTTACACTTGCCAAGATCCAAGCAAACAGTGTCATCTTCAGCATTTCCTGGAGCATGGCTGTTTGCTCTaGGAGAGCCAACATAAGCTA +
Preference number: 4 (lower is better)
Translates to: PYTCQDPSKQCHLQHFLEHGCLL*ESQHKL
Trigger: TAGCTTATGTTGGCTCTCCCAGAGCAAACAGCCATG...CTCCAGGAAATGCTGAAGATGACACTGTTTGCTTGGATCTTGGCAAGTGTAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp GCAGGTAGTATTCTATCTCCTGGCTGGCTCATCACATTCAAAACAACCTGTTTTGGACAAACACCTCCATaGCTGTTTGCTCTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: AGSILSPGWLITFKTTCFGQTPP*LFALGE
Trigger: CTCTCCCAGAGCAAACAGCCATGGAGGTGTTTGTCC...AAAACAGGTTGTTTTGAATGTGATGAGCCAGCCAGGAGATAGAATACTACCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310823.8
CDS-3UTR CCA 90 bp CTACCACCAATAATTTACACGTGTTCTTCATGGGATCTGGGTCAGCTCTTCTTTGGACAAACACCTCCATaGCTGTTTGCTCTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: LPPIIYTCSSWDLGQLFFGQTPP*LFALGE
Trigger: CTCTCCCAGAGCAAACAGCCATGGAGGTGTTTGTCC...AAAGAAGAGCTGACCCAGATCCCATGAAGAACACGTGTAAATTATTGGTGGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp CCAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAACACATGACCAGCATACATATTTCCCTCCCTaGTCCTCATTCGGGGCACAT +
Preference number: 4 (lower is better)
Translates to: PNHTRTVYLQEVQTHDQHTYFPP*SSFGAH
Trigger: ATGTGCCCCGAATGAGGACCAGGGAGGGAAATATGT...ATGCTGGTCATGTGTTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp CACGTGTCCAGTGAAGAAGTCCTGCCATTTTACAGTGTACTCGCTTTCGTTTTTACATATTTCCCTCCCTaGTCCTCATTCGGGGCACAT +
Preference number: 4 (lower is better)
Translates to: HVSSEEVLPFYSVLAFVFTYFPP*SSFGAH
Trigger: ATGTGCCCCGAATGAGGACCAGGGAGGGAAATATGT...AAAAACGAAAGCGAGTACACTGTAAAATGGCAGGACTTCTTCACTGGACACGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp GCAGGTAGTATTCTATCTCCTGGCTGGCTCATCACATTCAAAACAACCTGTTTTATCTTCAGCATTTCCTaGAGGCGGGCACTCACTGCT +
Preference number: 4 (lower is better)
Translates to: AGSILSPGWLITFKTTCFIFSIS*RRALTA
Trigger: AGCAGTGAGTGCCCGCCTCCAGGAAATGCTGAAGAT...AAAACAGGTTGTTTTGAATGTGATGAGCCAGCCAGGAGATAGAATACTACCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310823.8
CDS-3UTR CCA 90 bp CTACCACCAATAATTTACACGTGTTCTTCATGGGATCTGGGTCAGCTCTTCTTTATCTTCAGCATTTCCTaGAGGCGGGCACTCACTGCT +
Preference number: 4 (lower is better)
Translates to: LPPIIYTCSSWDLGQLFFIFSIS*RRALTA
Trigger: AGCAGTGAGTGCCCGCCTCCAGGAAATGCTGAAGAT...AAAGAAGAGCTGACCCAGATCCCATGAAGAACACGTGTAAATTATTGGTGGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp ACACTTAAGTCAGAAGAGCTGAGAACTAAATTAGCACTCTGTTTCTTTGCTGTCCAGTTTTGGAGCTGCTaGCGCCGAAGGGATCACAGG +
Preference number: 4 (lower is better)
Translates to: TLKSEELRTKLALCFFAVQFWSC*RRRDHR
Trigger: CCTGTGATCCCTTCGGCGCCAGCAGCTCCAAAACTG...GACAGCAAAGAAACAGAGTGCTAATTTAGTTCTCAGCTCTTCTGACTTAAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp CCAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAACACATGACCAGCATGTGTCCATTCTCTGGTaGTCCAGTTTTGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: PNHTRTVYLQEVQTHDQHVSILW*SSFGAA
Trigger: AGCAGCTCCAAAACTGGACCACCAGAGAATGGACAC...ATGCTGGTCATGTGTTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp ACTGTTTACCTGCAGGAAGTTCAAACACATGACCAGCATCTGCTAAGTCACTTCCTTCTGGTGACCGGATaGTCCGTGAGATCCTCAAAT +
Preference number: 4 (lower is better)
Translates to: TVYLQEVQTHDQHLLSHFLLVTG*SVRSSN
Trigger: ATTTGAGGATCTCACGGACCATCCGGTCACCAGAAG...GAAGTGACTTAGCAGATGCTGGTCATGTGTTTGAACTTCCTGCAGGTAAACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp ACCTTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAAGTATCAAGTCTTGTaGGGACAGCCCCCAACCCTA +
Preference number: 4 (lower is better)
Translates to: TLPFQKEKGQTTQELFTCKYQVL*GQPPTL
Trigger: TAGGGTTGGGGGCTGTCCCCACAAGACTTGATACTT...GCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310823.8
CDS-3UTR CCA 90 bp GTCTTTGGGGAAAGGAACTGGTTTGACAATAAACAGGCTGCAGAGACTTACTTTAGAGAAGGCCCATTCTaGTCTCCTCTGCCACTGTGT +
Preference number: 4 (lower is better)
Translates to: VFGERNWFDNKQAAETYFREGPF*SPLPLC
Trigger: ACACAGTGGCAGAGGAGACCAGAATGGGCCTTCTCT...AAAGTAAGTCTCTGCAGCCTGTTTATTGTCAAACCAGTTCCTTTCCCCAAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618923.2
3UTR CAA 72 bp CTCTCGCAGAAAGGGATGCATTTCCCATCCTTACACTaGCCAAGATCCAAGCAAACAGTGTCATCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: LSQKGMHFPSLH*PRSKQTVSSSA
Trigger: TGCTGAAGATGACACTGTTTGCTTGGATCTTGGCAAGTGTAAGGATGGGAAATGCATCCCTTTCTGCGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp GTCAATGAAATCCCAAAATCGTTCAATTACATCCTGTACTCGTTTCTCACATTTTGGGCAGCCTTCGCCTaGCGGGGTTTCGGAAAACTG +
Preference number: 4 (lower is better)
Translates to: VNEIPKSFNYILYSFLTFWAAFA*RGFGKL
Trigger: CAGTTTTCCGAAACCCCGTCAGGCGAAGGCTGCCCA...AAATGTGAGAAACGAGTACAGGATGTAATTGAACGATTTTGGGATTTCATTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
CDS-3UTR TCA 90 bp TATGGGATACATGACATATTTCCCTCCCTGGTCCTCATTCGGGGCACATTCTGCGAGAATATCGTAGTCTaGGAGCAAAGAATCAAGCTT +
Preference number: 4 (lower is better)
Translates to: YGIHDIFPSLVLIRGTFCENIVV*EQRIKL
Trigger: AAGCTTGATTCTTTGCTCTCAGACTACGATATTCTC...GCAGAATGTGCCCCGAATGAGGACCAGGGAGGGAAATATGTCATGTATCCCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650116.1
CDS-3UTR TCA 90 bp GCTATTACCTGTGCAGTAGGACACGCCTTTGCAAGTAGCATTAATCGCCTCCTGTGGAGACTGCAAACGTaGAACATTCTTGATATCTTC +
Preference number: 4 (lower is better)
Translates to: AITCAVGHAFASSINRLLWRLQT*NILDIF
Trigger: GAAGATATCAAGAATGTTTCACGTTTGCAGTCTCCA...CAGGAGGCGATTAATGCTACTTGCAAAGGCGTGTCCTACTGCACAGGTAATAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp GTTCCCTCTCGCAGAAAGGGATGCATTTCCCATCCTTACACTTGCCAAGATCCATGGAGACTGCAAACGTaGAACATTCTTGATATCTTC +
Preference number: 4 (lower is better)
Translates to: VPSRRKGCISHPYTCQDPWRLQT*NILDIF
Trigger: GAAGATATCAAGAATGTTTCACGTTTGCAGTCTCCA...TGGATCTTGGCAAGTGTAAGGATGGGAAATGCATCCCTTTCTGCGAGAGGGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp TTGCAGCAGGTGTCGTTGTTCAGATACATGATGCCAGGATCACACTCTTCTCCTTTATGTCCCAATTCATaGGTTGTAACCAGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: LQQVSLFRYMMPGSHSSPLCPNS*VVTRSA
Trigger: AGCTGACCTGGTTACAACTCATGAATTGGGACATAA...AGGAGAAGAGTGTGATCCTGGCATCATGTATCTGAACAACGACACCTGCTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp AAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAACACATGACCATCTTATTGTTCTCGTaGTCGCCACTCACAGCTATG +
Preference number: 4 (lower is better)
Translates to: KGQTTQELFTCRKFKHMTILLFS*SPLTAM
Trigger: CATAGCTGTGAGTGGCGATCACGAGAACAATAAGAT...GGTCATGTGTTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp CCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAAGTGGGCAGTCTCAAACTaGCAGTTTTTACAGCAAGGA +
Preference number: 4 (lower is better)
Translates to: PFQKEKGQTTQELFTCRKWAVSN*QFLQQG
Trigger: TCCTTGCTGTAAAAACTGTCAGTTTGAGACTGCCCA...CTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp ACCTTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCTCGACGTTACTGGGGTaGAACAGAGACAGAGATTCA +
Preference number: 4 (lower is better)
Translates to: TLPFQKEKGQTTQELFTCSTLLG*NRDRDS
Trigger: TGAATCTCTGTCTCTGTTTCACCCCAGTAACGTCGA...GCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp CTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAAGTCTGTCAACACGATTCTaGCGCTGCAGTTTAAAGGAG +
Preference number: 4 (lower is better)
Translates to: LFKRRRAKPHKNCLPAGSLSTRF*RCSLKE
Trigger: CTCCTTTAAACTGCAGCGTCAGAATCGTGTTGACAG...ACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp AAGGTCCCTGCAGCACACCTTGCAGGAGTTGTCAGTTTCATTACATGCACAGGAATCCGGATCATGTTCTaGTCCAAAATTATGTCCCAA +
Preference number: 4 (lower is better)
Translates to: KVPAAHLAGVVSFITCTGIRIMF*SKIMSQ
Trigger: TTGGGACATAATTTTGGAGCAGAACATGATCCGGAT...TCCTGTGCATGTAATGAAACTGACAACTCCTGCAAGGTGTGCTGCAGGGACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp GTCCCTGCAGCACACCTTGCAGGAGTTGTCAGTTTCATTACATGCACAGGACTCTCCCACAAACTTTATTaGTGCGTTCTTGAAAACACT +
Preference number: 4 (lower is better)
Translates to: VPAAHLAGVVSFITCTGLSHKLY*CVLENT
Trigger: AGTGTTTTCAAGAACGCAGCAATAAAGTTTGTGGGA...GAGTCCTGTGCATGTAATGAAACTGACAACTCCTGCAAGGTGTGCTGCAGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp ACACTTAAGTCAGAAGAGCTGAGAACTAAATTAGCACTCTGTTTCTTTGCTGTCCACCTTCCTTCAACGTaGAGTCGCTGTTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: TLKSEELRTKLALCFFAVHLPST*SRCCSR
Trigger: CCTGCTGCAACAGCGACTGCACGTTGAAGGAAGGTG...GACAGCAAAGAAACAGAGTGCTAATTTAGTTCTCAGCTCTTCTGACTTAAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp TCACCTTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGACTGTTCCTGTCACTaGACTGGACACCTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: SPYLFKRRRAKPHKNCLPDCSCH*TGHLPS
Trigger: TGAAGGAAGGTGTCCAGTGCAGTGACAGGAACAGTC...AGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAAGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp CTGAGAACTAAATTAGCACTCTGTTTCTTTGCTGTCAACACGATTCTGACGCTGCACTGCTATTACCTGTaGAGTAGGACACGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: LRTKLALCFFAVNTILTLHCYYL*SRTRLC
Trigger: GCAAAGGCGTGTCCTACTGCACAGGTAATAGCAGTG...CAGCGTCAGAATCGTGTTGACAGCAAAGAAACAGAGTGCTAATTTAGTTCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp CCTTACACTTGCCAAGATCCAAGCAAACAGTGTCATCTTCAGCATTTCCTGGAGTCCCATCCTTACACTTaGCAAGATCCAAGCAAACAG +
Preference number: 4 (lower is better)
Translates to: PYTCQDPSKQCHLQHFLESHPYT*QDPSKQ
Trigger: CTGTTTGCTTGGATCTTGGCAAGTGTAAGGATGGGA...CTCCAGGAAATGCTGAAGATGACACTGTTTGCTTGGATCTTGGCAAGTGTAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp TCACCTTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTCCGATGCAGAATCCATaGTGCTCAGCATTTCGACGT +
Preference number: 4 (lower is better)
Translates to: SPYLFKRRRAKPHKNCLPPMQNP*CSAFRR
Trigger: ACGTCGAAATGCTGAGCAGCATGGATTCTGCATCGG...AGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAAGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp TCCTTACACTTGCCAAGATCCAAGCAAACAGTGTCATCTTCAGCATTTCCTGGAGATAATGCGAACCGATaGAGAATCCATGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: SLHLPRSKQTVSSSAFPGDNANR*RIHAAQ
Trigger: CTGAGCAGCATGGATTCTGCATCGGTTCGCATTATC...TCCAGGAAATGCTGAAGATGACACTGTTTGCTTGGATCTTGGCAAGTGTAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp CAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAACACATGACCAGCATCGATAATGCGAACCGATaGAGAATCCATGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: QTTQELFTCRKFKHMTSIDNANR*RIHAAQ
Trigger: CTGAGCAGCATGGATTCTGCATCGGTTCGCATTATC...GATGCTGGTCATGTGTTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp GCTGTCAACACGATTCTGACGCTGCAGTTTAAAGGAGGCAGCCTTTTCACTTCTTCCAGCTGTATTTTCTaGTTTTGCACCACAGGTCAA +
Preference number: 4 (lower is better)
Translates to: AVNTILTLQFKGGSLFTSSSCIF*FCTTGQ
Trigger: TTGACCTGTGGTGCAAAAGCAGAAAATACAGCTGGA...AGAAGTGAAAAGGCTGCCTCCTTTAAACTGCAGCGTCAGAATCGTGTTGACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp CAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAACACATGACCAGCATCCCTTCACACAGTAAATaGAGCCCATCCAGAATCCTG +
Preference number: 4 (lower is better)
Translates to: QTTQELFTCRKFKHMTSIPSHSK*SPSRIL
Trigger: CAGGATTCTGGATGGGCTGCATTTACTGTGTGAAGG...GATGCTGGTCATGTGTTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310823.8
CDS-3UTR CCA 90 bp CCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAAGGTTCTTCATGGGATCTaGGTCAGCTCTTCTTTTCAC +
Preference number: 4 (lower is better)
Translates to: PFQKEKGQTTQELFTCRKVLHGI*VSSSFH
Trigger: GTGAAAAGAAGAGCTGACCCAGATCCCATGAAGAAC...CTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp CTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAAGTTACACGTGTTCTTCATaGGATCTGGGTCAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: LFKRRRAKPHKNCLPAGSYTCSS*DLGQLF
Trigger: GAAGAGCTGACCCAGATCCCATGAAGAACACGTGTA...ACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp CACCTTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGTACACGTGTTCTTCATaGGATCTGGGTCAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: HLTFSKGEGPNHTRTVYLYTCSS*DLGQLF
Trigger: GAAGAGCTGACCCAGATCCCATGAAGAACACGTGTA...CAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp ATTGCTGCGTTCTTGAAAACACTCCTGGGCCTTACTTTCAATGGTCTTATAGATGGACAAACACCTCCATaGCTGTTTGCTCTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: IAAFLKTLLGLTFNGLIDGQTPP*LFALGE
Trigger: CTCTCCCAGAGCAAACAGCCATGGAGGTGTTTGTCC...ATCTATAAGACCATTGAAAGTAAGGCCCAGGAGTGTTTTCAAGAACGCAGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp CTGTTGCAGCAGGTGTCGTTGTTCAGATACATGATGCCAGGATCACACTCTTCTGCTATAATAAGCCTTTaGACAAACACCTCCATGGCT +
Preference number: 4 (lower is better)
Translates to: LLQQVSLFRYMMPGSHSSAIISL*TNTSMA
Trigger: AGCCATGGAGGTGTTTGTCCAAAGGCTTATTATAGC...AGAAGAGTGTGATCCTGGCATCATGTATCTGAACAACGACACCTGCTGCAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp TCCGTGAGATCCTCAAATGACTTGGCAGCTGTGCTGCTATTTGGGAAGGGGTCCGGGCCTTACTTTCAATaGTCTTATAGATTGATTGTT +
Preference number: 4 (lower is better)
Translates to: SVRSSNDLAAVLLFGKGSGPYFQ*SYRLIV
Trigger: AACAATCAATCTATAAGACCATTGAAAGTAAGGCCC...GGACCCCTTCCCAAATAGCAGCACAGCTGCCAAGTCATTTGAGGATCTCACGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp TCACCTTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTTTCCTGTCACTGCACTaGACACCTTCCTTCAACGTG +
Preference number: 4 (lower is better)
Translates to: SPYLFKRRRAKPHKNCLPFLSLH*TPSFNV
Trigger: CACGTTGAAGGAAGGTGTCCAGTGCAGTGACAGGAA...AGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAAGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp ACTGTTTACCTGCAGGAAGTTCAAACACATGACCAGCATCTGCTAAGTCACTTCGCATTTCGACGTTACTaGGGTGAAACAGAGACAGAG +
Preference number: 4 (lower is better)
Translates to: TVYLQEVQTHDQHLLSHFAFRRY*GETETE
Trigger: CTCTGTCTCTGTTTCACCCCAGTAACGTCGAAATGC...GAAGTGACTTAGCAGATGCTGGTCATGTGTTTGAACTTCCTGCAGGTAAACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp AGCTCTTCAGGTGGTTCTCTGTCTACTAACCCTTTTGGGAGCAACTCTTCATTAGCATTTCGACGTTACTaGGGTGAAACAGAGACAGAG +
Preference number: 4 (lower is better)
Translates to: SSSGGSLSTNPFGSNSSLAFRRY*GETETE
Trigger: CTCTGTCTCTGTTTCACCCCAGTAACGTCGAAATGC...TAATGAAGAGTTGCTCCCAAAAGGGTTAGTAGACAGAGAACCACCTGAAGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647979.1
ENST00000649227.1
CDS-3UTR CCA 90 bp ACCTTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCGCATTTCGACGTTACTaGGGTGAAACAGAGACAGAG +
Preference number: 4 (lower is better)
Translates to: TLPFQKEKGQTTQELFTCAFRRY*GETETE
Trigger: CTCTGTCTCTGTTTCACCCCAGTAACGTCGAAATGC...GCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp TGCACACTTAAGTCAGAAGAGCTGAGAACTAAATTAGCACTCTGTTTCTTTGCTGTGCTGGGGTCTTCCTaGATGGTGTCCATTCTCTGG +
Preference number: 4 (lower is better)
Translates to: CTLKSEELRTKLALCFFAVLGSS*MVSILW
Trigger: CCAGAGAATGGACACCATCCAGGAAGACCCCAGCAC...AGCAAAGAAACAGAGTGCTAATTTAGTTCTCAGCTCTTCTGACTTAAGTGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp TCACCTTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTTATGTGAGTCTGTGCTaGGGTCTTCCTGGATGGTGT +
Preference number: 4 (lower is better)
Translates to: SPYLFKRRRAKPHKNCLPYVSLC*GLPGWC
Trigger: ACACCATCCAGGAAGACCCCAGCACAGACTCACATA...AGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAAGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp TCACCTTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTCTTCTGGTGACCGGATaGTCCGTGAGATCCTCAAAT +
Preference number: 4 (lower is better)
Translates to: SPYLFKRRRAKPHKNCLPLLVTG*SVRSSN
Trigger: ATTTGAGGATCTCACGGACCATCCGGTCACCAGAAG...AGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAAGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR CAA 72 bp CACCCTCGAGTTCCCACAAACTTTATTGCTGCGTTCTaGAAAACACTCCTGGGCCTTACTTTCAATGGTCTT +
Preference number: 4 (lower is better)
Translates to: HPRVPTNFIAAF*KTLLGLTFNGL
Trigger: AAGACCATTGAAAGTAAGGCCCAGGAGTGTTTTCAAGAACGCAGCAATAAAGTTTGTGGGAACTCGAGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp TCACCTTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTCAACCACGTGTCCAGTaGAGAAGTCCTGCCATTTTA +
Preference number: 4 (lower is better)
Translates to: SPYLFKRRRAKPHKNCLPQPRVQ*RSPAIL
Trigger: TAAAATGGCAGGACTTCTTCACTGGACACGTGGTTG...AGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAAGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310823.8
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp CACCTTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCTTCTTTTCACTCGATaGACAAGCTCTTCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: HLTFSKGEGPNHTRTVYLLLFTR*TSSSGG
Trigger: ACCACCTGAAGAGCTTGTTCATCGAGTGAAAAGAAG...CAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310823.8
ENST00000647979.1
ENST00000649227.1
CDS-3UTR TCA 90 bp AACTACTTAGAAGCCCACCATGATACACATCTAAACCACACCCTCCAATCCATCCTTCTTTTCACTCGATaGACAAGCTCTTCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: NYLEAHHDTHLNHTLQSILLFTR*TSSSGG
Trigger: ACCACCTGAAGAGCTTGTTCATCGAGTGAAAAGAAG...GATGGATTGGAGGGTGTGGTTTAGATGTGTATCATGGTGGGCTTCTAAGTAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618923.2
CDS-3UTR TCA 90 bp AGCTCTTCAGGTGGTTCTCTGTCTACTAACCCTTTTGGGAGCAACTCTTCATTACTTCTTTTCACTCGATaGACAAGCTCTTCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: SSSGGSLSTNPFGSNSSLLLFTR*TSSSGG
Trigger: ACCACCTGAAGAGCTTGTTCATCGAGTGAAAAGAAG...TAATGAAGAGTTGCTCCCAAAAGGGTTAGTAGACAGAGAACCACCTGAAGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647979.1
ENST00000649227.1
CDS-3UTR TCA 90 bp TCACCTTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTCCTCTTGTGGAGACTTaGGAATGCGAATCTGCTCTA +
Preference number: 4 (lower is better)
Translates to: SPYLFKRRRAKPHKNCLPPLVET*ECESAL
Trigger: TAGAGCAGATTCGCATTCTCAAGTCTCCACAAGAGG...AGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAAGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310823.8
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp ACCTTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCTTATTGCTGCGTTCTTaGAAACACTCCTGGGCCTTA +
Preference number: 4 (lower is better)
Translates to: TLPFQKEKGQTTQELFTCLLLRS*KHSWAL
Trigger: TAAGGCCCAGGAGTGTTTTCAAGAACGCAGCAATAA...GCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp CCAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAACACATGACCAGCATCGTTGTTCAGATACATaGTGCCAGGATCACACTCTT +
Preference number: 4 (lower is better)
Translates to: PNHTRTVYLQEVQTHDQHRCSDT*CQDHTL
Trigger: AAGAGTGTGATCCTGGCATCATGTATCTGAACAACG...ATGCTGGTCATGTGTTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp CAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAACACATGACCAGCATCCGTTGTTCAGATACATaGTGCCAGGATCACACTCTT +
Preference number: 4 (lower is better)
Translates to: QTTQELFTCRKFKHMTSIRCSDT*CQDHTL
Trigger: AAGAGTGTGATCCTGGCATCATGTATCTGAACAACG...GATGCTGGTCATGTGTTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp CACAAACTTTATTGCTGCGTTCTTGAAAACACTCCTGGGCCTTACTTTCAATGGTCGACGTTACTGGGGTaGAACAGAGACAGAGATTCA +
Preference number: 4 (lower is better)
Translates to: HKLYCCVLENTPGPYFQWSTLLG*NRDRDS
Trigger: TGAATCTCTGTCTCTGTTTCACCCCAGTAACGTCGA...CCATTGAAAGTAAGGCCCAGGAGTGTTTTCAAGAACGCAGCAATAAAGTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp TGCACACTTAAGTCAGAAGAGCTGAGAACTAAATTAGCACTCTGTTTCTTTGCTATCCTCGTCCATATGTaGGTCTGTGCTGGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: CTLKSEELRTKLALCFFAILVHM*VCAGVF
Trigger: GAAGACCCCAGCACAGACTCACATATGGACGAGGAT...AGCAAAGAAACAGAGTGCTAATTTAGTTCTCAGCTCTTCTGACTTAAGTGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp CCAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAACACATGACCAGCATGGAAGTTCAAACACATaGCCAGCATCTGCTAAGTCA +
Preference number: 4 (lower is better)
Translates to: PNHTRTVYLQEVQTHDQHGSSNT*PASAKS
Trigger: TGACTTAGCAGATGCTGGTCATGTGTTTGAACTTCC...ATGCTGGTCATGTGTTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp AACTGGTTTGACAATAAACAGGCTGCAGAGACTTACTTTTCACTGGCTTTTGTATGGACTCTGCAGTTTTaGTGGTGGCTGGTCAAGGTC +
Preference number: 4 (lower is better)
Translates to: NWFDNKQAAETYFSLAFVWTLQF*WWLVKV
Trigger: GACCTTGACCAGCCACCATCAAAACTGCAGAGTCCA...TACAAAAGCCAGTGAAAAGTAAGTCTCTGCAGCCTGTTTATTGTCAAACCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000618923.2
CDS-3UTR GCA 90 bp TTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGCCAGTGAAGAAGTCCTaGCATTTTACAGTGTACTCG +
Preference number: 4 (lower is better)
Translates to: LPFQKEKGQTTQELFTCRPVKKS*HFTVYS
Trigger: CGAGTACACTGTAAAATGGCAGGACTTCTTCACTGG...CCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310823.8
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp CTGTTGCAGCAGGTGTCGTTGTTCAGATACATGATGCCAGGATCACACTCTTCTGTATGTGAAAAGGTGTaGCAAGCAAACTTTAGATGC +
Preference number: 4 (lower is better)
Translates to: LLQQVSLFRYMMPGSHSSVCEKV*QANFRC
Trigger: GCATCTAAAGTTTGCTTGGCACACCTTTTCACATAC...AGAAGAGTGTGATCCTGGCATCATGTATCTGAACAACGACACCTGCTGCAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp GTCCCTGCAGCACACCTTGCAGGAGTTGTCAGTTTCATTACATGCACAGGACTCTACCATAATTCTTTGTaGTCGTCAAACCACTATTCA +
Preference number: 4 (lower is better)
Translates to: VPAAHLAGVVSFITCTGLYHNSL*SSNHYS
Trigger: TGAATAGTGGTTTGACGAGCACAAAGAATTATGGTA...GAGTCCTGTGCATGTAATGAAACTGACAACTCCTGCAAGGTGTGCTGCAGGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp AACCGATGCAGAATCCATGCTGCTCAGCATTTCGACGTTACTGGGGTGAAACAGTCCCACAAACTTTATTaGTGCGTTCTTGAAAACACT +
Preference number: 4 (lower is better)
Translates to: NRCRIHAAQHFDVTGVKQSHKLY*CVLENT
Trigger: AGTGTTTTCAAGAACGCAGCAATAAAGTTTGTGGGA...CTGTTTCACCCCAGTAACGTCGAAATGCTGAGCAGCATGGATTCTGCATCGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp CTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCCCATCCTTACACTTaGCAAGATCCAAGCAAACAG +
Preference number: 4 (lower is better)
Translates to: LFKRRRAKPHKNCLPAGSSHPYT*QDPSKQ
Trigger: CTGTTTGCTTGGATCTTGGCAAGTGTAAGGATGGGA...ACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp AGCTCTTCAGGTGGTTCTCTGTCTACTAACCCTTTTGGGAGCAACTCTTCATTATCCCATCCTTACACTTaGCAAGATCCAAGCAAACAG +
Preference number: 4 (lower is better)
Translates to: SSSGGSLSTNPFGSNSSLSHPYT*QDPSKQ
Trigger: CTGTTTGCTTGGATCTTGGCAAGTGTAAGGATGGGA...TAATGAAGAGTTGCTCCCAAAAGGGTTAGTAGACAGAGAACCACCTGAAGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647979.1
ENST00000649227.1
CDS-3UTR GCA 90 bp TTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGTCTCGCAGAAAGGGATaGATTTCCCATCCTTACACT +
Preference number: 4 (lower is better)
Translates to: LPFQKEKGQTTQELFTCRSRRKG*ISHPYT
Trigger: AGTGTAAGGATGGGAAATGCATCCCTTTCTGCGAGA...CCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp CCAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAACACATGACCAGCATTCTCGCAGAAAGGGATaGATTTCCCATCCTTACACT +
Preference number: 4 (lower is better)
Translates to: PNHTRTVYLQEVQTHDQHSRRKG*ISHPYT
Trigger: AGTGTAAGGATGGGAAATGCATCCCTTTCTGCGAGA...ATGCTGGTCATGTGTTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp GCAGGTAGTATTCTATCTCCTGGCTGGCTCATCACATTCAAAACAACCTGTTTTGTCAGTTTCATTACATaGACAGGACTCCAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: AGSILSPGWLITFKTTCFVSFIT*TGLQLL
Trigger: CAGCAGCTGGAGTCCTGTGCATGTAATGAAACTGAC...AAAACAGGTTGTTTTGAATGTGATGAGCCAGCCAGGAGATAGAATACTACCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310823.8
CDS-3UTR GCA 90 bp AACCGATGCAGAATCCATGCTGCTCAGCATTTCGACGTTACTGGGGTGAAACAGCAAATAAATGCCAAATaGCTCATATTCAGCGGTTCA +
Preference number: 4 (lower is better)
Translates to: NRCRIHAAQHFDVTGVKQQINAK*LIFSGS
Trigger: TGAACCGCTGAATATGAGGCATTTGGCATTTATTTG...CTGTTTCACCCCAGTAACGTCGAAATGCTGAGCAGCATGGATTCTGCATCGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647979.1
ENST00000649227.1
CDS-3UTR GCA 90 bp TTGACAATAAACAGGCTGCAGAGACTTACTTTTCACTGGCTTTTGTACTGTGTATACTGGGGTGGACTCTaGAGTTTTGATGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LTINRLQRLTFHWLLYCVYWGGL*SFDGGW
Trigger: CCAGCCACCATCAAAACTGCAGAGTCCACCCCAGTA...TACACAGTACAAAAGCCAGTGAAAAGTAAGTCTCTGCAGCCTGTTTATTGTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000618923.2
CDS-3UTR CCA 90 bp ACTTCTTCTGGGCAGTCTCAAACTGACAGTTTTTACAGCAAGGACTGTTCCTGTGTTCTTCATGGGATCTaGGTCAGCTCTTCTTTTCAC +
Preference number: 4 (lower is better)
Translates to: TSSGQSQTDSFYSKDCSCVLHGI*VSSSFH
Trigger: GTGAAAAGAAGAGCTGACCCAGATCCCATGAAGAAC...ACAGGAACAGTCCTTGCTGTAAAAACTGTCAGTTTGAGACTGCCCAGAAGAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp CACGTGTCCAGTGAAGAAGTCCTGCCATTTTACAGTGTACTCGCTTTCGTTTTTGTTCTTCATGGGATCTaGGTCAGCTCTTCTTTTCAC +
Preference number: 4 (lower is better)
Translates to: HVSSEEVLPFYSVLAFVFVLHGI*VSSSFH
Trigger: GTGAAAAGAAGAGCTGACCCAGATCCCATGAAGAAC...AAAAACGAAAGCGAGTACACTGTAAAATGGCAGGACTTCTTCACTGGACACGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp GACCCAACGATGTTGTCTGCTAAAAACTTTCCAAAAGTATTGATGCTCAGCTGGTACACGTGTTCTTCATaGGATCTGGGTCAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: DPTMLSAKNFPKVLMLSWYTCSS*DLGQLF
Trigger: GAAGAGCTGACCCAGATCCCATGAAGAACACGTGTA...CCAGCTGAGCATCAATACTTTTGGAAAGTTTTTAGCAGACAACATCGTTGGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp TCACCTTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTCATGGCTGTTTGCTCTaGGAGAGCCAACATAAGCTA +
Preference number: 4 (lower is better)
Translates to: SPYLFKRRRAKPHKNCLPHGCLL*ESQHKL
Trigger: TAGCTTATGTTGGCTCTCCCAGAGCAAACAGCCATG...AGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAAGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp ACTCCAGCTGCTGTTCCCTCTCGCAGAAAGGGATGCATTTCCCATCCTTACACTGGGCCTTACTTTCAATaGTCTTATAGATTGATTGTT +
Preference number: 4 (lower is better)
Translates to: TPAAVPSRRKGCISHPYTGPYFQ*SYRLIV
Trigger: AACAATCAATCTATAAGACCATTGAAAGTAAGGCCC...AGTGTAAGGATGGGAAATGCATCCCTTTCTGCGAGAGGGAACAGCAGCTGGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp CTATTTGGGAAGGGGTCCTTCTCAAACCCATCCTCGTCCATATGTGAGTCTGTGGTATTGATGCTCAGCTaGTCAATGAAATCCCAAAAT +
Preference number: 4 (lower is better)
Translates to: LFGKGSFSNPSSSICESVVLMLS*SMKSQN
Trigger: ATTTTGGGATTTCATTGACCAGCTGAGCATCAATAC...CACAGACTCACATATGGACGAGGATGGGTTTGAGAAGGACCCCTTCCCAAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp ATTGCTGCGTTCTTGAAAACACTCCTGGGCCTTACTTTCAATGGTCTTATAGATGTGTCCATTCTCTGGTaGTCCAGTTTTGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: IAAFLKTLLGLTFNGLIDVSILW*SSFGAA
Trigger: AGCAGCTCCAAAACTGGACCACCAGAGAATGGACAC...ATCTATAAGACCATTGAAAGTAAGGCCCAGGAGTGTTTTCAAGAACGCAGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp TCACCTTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTATGGTGTCCATTCTCTaGTGGTCCAGTTTTGGAGCT +
Preference number: 4 (lower is better)
Translates to: SPYLFKRRRAKPHKNCLPMVSIL*WSSFGA
Trigger: AGCTCCAAAACTGGACCACCAGAGAATGGACACCAT...AGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAAGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp TTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGGATCCTCAAATGACTTaGCAGCTGTGCTGCTATTTG +
Preference number: 4 (lower is better)
Translates to: LPFQKEKGQTTQELFTCRDPQMT*QLCCYL
Trigger: CAAATAGCAGCACAGCTGCCAAGTCATTTGAGGATC...CCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
3UTR CAA 72 bp TGCCATGTTGTAGTGCTTTTCACCAGGTTTTACCTCTaGTGGAGACTTGAGAATGCGAATCTGCTCTATCTG +
Preference number: 4 (lower is better)
Translates to: CHVVVLFTRFYL*WRLENANLLYL
Trigger: CAGATAGAGCAGATTCGCATTCTCAAGTCTCCACAAGAGGTAAAACCTGGTGAAAAGCACTACAACATGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp CCAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAACACATGACCAGCATCCACCACCACGACCTTaGAATTTTGTGAAAAACGTT +
Preference number: 4 (lower is better)
Translates to: PNHTRTVYLQEVQTHDQHPPPRP*NFVKNV
Trigger: AACGTTTTTCACAAAATTTCAAGGTCGTGGTGGTGG...ATGCTGGTCATGTGTTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310823.8
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp GAAGAGCTGAGAACTAAATTAGCACTCTGTTTCTTTGCTGTCAACACGATTCTGCCTCTTGTGGAGACTTaGGAATGCGAATCTGCTCTA +
Preference number: 4 (lower is better)
Translates to: EELRTKLALCFFAVNTILPLVET*ECESAL
Trigger: TAGAGCAGATTCGCATTCTCAAGTCTCCACAAGAGG...CAGAATCGTGTTGACAGCAAAGAAACAGAGTGCTAATTTAGTTCTCAGCTCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp CAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAACACATGACCAGCATCTTATGTCCCAATTCATaGGTTGTAACCAGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: QTTQELFTCRKFKHMTSILCPNS*VVTRSA
Trigger: AGCTGACCTGGTTACAACTCATGAATTGGGACATAA...GATGCTGGTCATGTGTTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp TCCTTACACTTGCCAAGATCCAAGCAAACAGTGTCATCTTCAGCATTTCCTGGATTATGTCCCAATTCATaGGTTGTAACCAGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: SLHLPRSKQTVSSSAFPGLCPNS*VVTRSA
Trigger: AGCTGACCTGGTTACAACTCATGAATTGGGACATAA...TCCAGGAAATGCTGAAGATGACACTGTTTGCTTGGATCTTGGCAAGTGTAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp CCAATAATTTACACGTGTTCTTCATGGGATCTGGGTCAGCTCTTCTTTTCACTCTGGGCAGTCTCAAACTaGCAGTTTTTACAGCAAGGA +
Preference number: 4 (lower is better)
Translates to: PIIYTCSSWDLGQLFFSLWAVSN*QFLQQG
Trigger: TCCTTGCTGTAAAAACTGTCAGTTTGAGACTGCCCA...GAGTGAAAAGAAGAGCTGACCCAGATCCCATGAAGAACACGTGTAAATTATTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp GCACATTCTGCTAGACCATCCGGATCATGTTCTGCTCCAAAATTATGTCCCAATTGCTCAGCTGGTCAATaGAATCCCAAAATCGTTCAA +
Preference number: 4 (lower is better)
Translates to: AHSARPSGSCSAPKLCPNCSAGQ*NPKIVQ
Trigger: TTGAACGATTTTGGGATTTCATTGACCAGCTGAGCA...ATTGGGACATAATTTTGGAGCAGAACATGATCCGGATGGTCTAGCAGAATGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp CCTGGGCCTTACTTTCAATGGTCTTATAGATTGATTGTTTACTGCAGTTTGAAAATCCTCGTCCATATGTaGGTCTGTGCTGGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: PGPYFQWSYRLIVYCSLKILVHM*VCAGVF
Trigger: GAAGACCCCAGCACAGACTCACATATGGACGAGGAT...TTTCAAACTGCAGTAAACAATCAATCTATAAGACCATTGAAAGTAAGGCCCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp TCACCTTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGGAAGTTCAAACACATaGCCAGCATCTGCTAAGTCA +
Preference number: 4 (lower is better)
Translates to: SPYLFKRRRAKPHKNCLPGSSNT*PASAKS
Trigger: TGACTTAGCAGATGCTGGTCATGTGTTTGAACTTCC...AGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAAGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp GTCTTTGGGGAAAGGAACTGGTTTGACAATAAACAGGCTGCAGAGACTTACTTTCCAGTGAAGAAGTCCTaGCATTTTACAGTGTACTCG +
Preference number: 4 (lower is better)
Translates to: VFGERNWFDNKQAAETYFPVKKS*HFTVYS
Trigger: CGAGTACACTGTAAAATGGCAGGACTTCTTCACTGG...AAAGTAAGTCTCTGCAGCCTGTTTATTGTCAAACCAGTTCCTTTCCCCAAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618923.2
CDS-3UTR GCA 90 bp GACCCAACGATGTTGTCTGCTAAAAACTTTCCAAAAGTATTGATGCTCAGCTGGCCAGTGAAGAAGTCCTaGCATTTTACAGTGTACTCG +
Preference number: 4 (lower is better)
Translates to: DPTMLSAKNFPKVLMLSWPVKKS*HFTVYS
Trigger: CGAGTACACTGTAAAATGGCAGGACTTCTTCACTGG...CCAGCTGAGCATCAATACTTTTGGAAAGTTTTTAGCAGACAACATCGTTGGGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp CTATTTGGGAAGGGGTCCTTCTCAAACCCATCCTCGTCCATATGTGAGTCTGTGATTTGGGTAACTTTTTaGCATGTTGTAGTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: LFGKGSFSNPSSSICESVIWVTF*HVVVLF
Trigger: GAAAAGCACTACAACATGGCAAAAAGTTACCCAAAT...CACAGACTCACATATGGACGAGGATGGGTTTGAGAAGGACCCCTTCCCAAATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp TTCCTTTGTAAGGATGGTTTTACCATAATTCTTTGTGCTCGTCAAACCACTATTCACCTTCCTTCAACGTaGAGTCGCTGTTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: FLCKDGFTIILCARQTTIHLPST*SRCCSR
Trigger: CCTGCTGCAACAGCGACTGCACGTTGAAGGAAGGTG...AATAGTGGTTTGACGAGCACAAAGAATTATGGTAAAACCATCCTTACAAAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp CTGTTGCAGCAGGTGTCGTTGTTCAGATACATGATGCCAGGATCACACTCTTCTCTCGTTTCTCACATTTaGCATTCATGTCACAAAATC +
Preference number: 4 (lower is better)
Translates to: LLQQVSLFRYMMPGSHSSLVSHI*HSCHKI
Trigger: GATTTTGTGACATGAATGGCAAATGTGAGAAACGAG...AGAAGAGTGTGATCCTGGCATCATGTATCTGAACAACGACACCTGCTGCAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp TTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAGCACTCTGTTTCTTTaGTGTCAACACGATTCTGAC +
Preference number: 4 (lower is better)
Translates to: LPFQKEKGQTTQELFTCRSTLFL*CQHDSD
Trigger: GTCAGAATCGTGTTGACAGCAAAGAAACAGAGTGCT...CCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp CAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAATCCAGCTGTATTTTCTaGTTTTGCACCACAGGTCAA +
Preference number: 4 (lower is better)
Translates to: QKEKGQTTQELFTCRKFKSSCIF*FCTTGQ
Trigger: TTGACCTGTGGTGCAAAAGCAGAAAATACAGCTGGA...TTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp CACCTTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGAAAATACAGAAAAACTaGCCAGCAAATCAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: HLTFSKGEGPNHTRTVYLKIQKN*PANQGP
Trigger: AGGGCCCTGATTTGCTGGGCAGTTTTTCTGTATTTT...CAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAAGGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000310823.8
ENST00000649227.1
CDS-3UTR CCA 90 bp CACCTTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGTCATCATCTCTTATGTaGGCTAGAACCCTAGAGTCA +
Preference number: 4 (lower is better)
Translates to: HLTFSKGEGPNHTRTVYLSSSLM*ARTLES
Trigger: TGACTCTAGGGTTCTAGCCCACATAAGAGATGATGA...CAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310823.8
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp AGGCTGCAGAGACTTACTTTTCACTGGCTTTTGTACTGTGTACATGTTACCTATTACACGTGTTCTTCATaGGATCTGGGTCAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: RLQRLTFHWLLYCVHVTYYTCSS*DLGQLF
Trigger: GAAGAGCTGACCCAGATCCCATGAAGAACACGTGTA...ATAGGTAACATGTACACAGTACAAAAGCCAGTGAAAAGTAAGTCTCTGCAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618923.2
CDS-3UTR CCA 90 bp CCAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAACACATGACCAGCATGCTATAATAAGCCTTTaGACAAACACCTCCATGGCT +
Preference number: 4 (lower is better)
Translates to: PNHTRTVYLQEVQTHDQHAIISL*TNTSMA
Trigger: AGCCATGGAGGTGTTTGTCCAAAGGCTTATTATAGC...ATGCTGGTCATGTGTTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp ATTACCTGTGCAGTAGGACACGCCTTTGCAAGTAGCATTAATCGCCTCCTGGCAGGGCCTTACTTTCAATaGTCTTATAGATTGATTGTT +
Preference number: 4 (lower is better)
Translates to: ITCAVGHAFASSINRLLAGPYFQ*SYRLIV
Trigger: AACAATCAATCTATAAGACCATTGAAAGTAAGGCCC...TGCCAGGAGGCGATTAATGCTACTTGCAAAGGCGTGTCCTACTGCACAGGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp ACACTTAAGTCAGAAGAGCTGAGAACTAAATTAGCACTCTGTTTCTTTGCTGTCTATGTGAGTCTGTGCTaGGGTCTTCCTGGATGGTGT +
Preference number: 4 (lower is better)
Translates to: TLKSEELRTKLALCFFAVYVSLC*GLPGWC
Trigger: ACACCATCCAGGAAGACCCCAGCACAGACTCACATA...GACAGCAAAGAAACAGAGTGCTAATTTAGTTCTCAGCTCTTCTGACTTAAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp CAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAACACATGACCAGCATCGCCCATCCAGAATCCTaGAGCAATAAAGTAAGAAGT +
Preference number: 4 (lower is better)
Translates to: QTTQELFTCRKFKHMTSIAHPES*SNKVRS
Trigger: ACTTCTTACTTTATTGCTCCAGGATTCTGGATGGGC...GATGCTGGTCATGTGTTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310823.8
3UTR CAA 72 bp CAGAAAAACTGCCCAGCAAATCAGGGCCCTAAACAGTaGGTAGATTCCATAAATTCAACTGGCTACCATGTA +
Preference number: 4 (lower is better)
Translates to: QKNCPANQGPKQ*VDSINSTGYHV
Trigger: TACATGGTAGCCAGTTGAATTTATGGAATCTACCAACTGTTTAGGGCCCTGATTTGCTGGGCAGTTTTTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310823.8
ENST00000649227.1
CDS-3UTR TCA 90 bp CAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAACACATGACCAGCATCGAGAATATCGTAGTCTaGGAGCAAAGAATCAAGCTT +
Preference number: 4 (lower is better)
Translates to: QTTQELFTCRKFKHMTSIENIVV*EQRIKL
Trigger: AAGCTTGATTCTTTGCTCTCAGACTACGATATTCTC...GATGCTGGTCATGTGTTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310823.8
ENST00000650116.1
CDS-3UTR TCA 90 bp CTGAGAACTAAATTAGCACTCTGTTTCTTTGCTGTCAACACGATTCTGACGCTGCCACCACCACGACCTTaGAATTTTGTGAAAAACGTT +
Preference number: 4 (lower is better)
Translates to: LRTKLALCFFAVNTILTLPPPRP*NFVKNV
Trigger: AACGTTTTTCACAAAATTTCAAGGTCGTGGTGGTGG...CAGCGTCAGAATCGTGTTGACAGCAAAGAAACAGAGTGCTAATTTAGTTCTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp CCAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAACACATGACCAGCATTGGAGACTGCAAACGTaGAACATTCTTGATATCTTC +
Preference number: 4 (lower is better)
Translates to: PNHTRTVYLQEVQTHDQHWRLQT*NILDIF
Trigger: GAAGATATCAAGAATGTTTCACGTTTGCAGTCTCCA...ATGCTGGTCATGTGTTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp ACTGTTTACCTGCAGGAAGTTCAAACACATGACCAGCATCTGCTAAGTCACTTCCAAAATCTTGGTATGTaGAAAGGTGTGCCAAGCAAA +
Preference number: 4 (lower is better)
Translates to: TVYLQEVQTHDQHLLSHFQNLGM*KGVPSK
Trigger: TTTGCTTGGCACACCTTTTCACATACCAAGATTTTG...GAAGTGACTTAGCAGATGCTGGTCATGTGTTTGAACTTCCTGCAGGTAAACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp CCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAAGGAACAAGCTCTAATATaGATTTGTATGCACTTCAGG +
Preference number: 4 (lower is better)
Translates to: PFQKEKGQTTQELFTCRKEQALI*ICMHFR
Trigger: CCTGAAGTGCATACAAATTCATATTAGAGCTTGTTC...CTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647610.1
ENST00000650116.1
CDS-3UTR GCA 90 bp CAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAACACATGACCAGCATCCACACTTTTGGAGACTaGAAACGTGAAACATTCTTG +
Preference number: 4 (lower is better)
Translates to: QTTQELFTCRKFKHMTSIHTFGD*KRETFL
Trigger: CAAGAATGTTTCACGTTTGCAGTCTCCAAAAGTGTG...GATGCTGGTCATGTGTTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp TGCACTTCAGGTGGTTCTCTGTCTACTAACCCTTTTGGGAGCAACTCTTCATTACACACTTTTGGAGACTaGAAACGTGAAACATTCTTG +
Preference number: 4 (lower is better)
Translates to: CTSGGSLSTNPFGSNSSLHTFGD*KRETFL
Trigger: CAAGAATGTTTCACGTTTGCAGTCTCCAAAAGTGTG...TAATGAAGAGTTGCTCCCAAAAGGGTTAGTAGACAGAGAACCACCTGAAGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647610.1
ENST00000650116.1
CDS-3UTR GCA 90 bp TTGCAGCAGGTGTCGTTGTTCAGATACATGATGCCAGGATCACACTCTTCTCCTATTTGGGTAACTTTTTaGCATGTTGTAGTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: LQQVSLFRYMMPGSHSSPIWVTF*HVVVLF
Trigger: GAAAAGCACTACAACATGGCAAAAAGTTACCCAAAT...AGGAGAAGAGTGTGATCCTGGCATCATGTATCTGAACAACGACACCTGCTGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp GCTGTCAACACGATTCTGACGCTGCAGTTTAAAGGAGGCAGCCTTTTCACTTCTCAAGCAAACTTTAGATaGTTCCTCAGCTATATCAAA +
Preference number: 4 (lower is better)
Translates to: AVNTILTLQFKGGSLFTSQANFR*FLSYIK
Trigger: TTTGATATAGCTGAGGAAGCATCTAAAGTTTGCTTG...AGAAGTGAAAAGGCTGCCTCCTTTAAACTGCAGCGTCAGAATCGTGTTGACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp TGGGTCAGCTCTTCTTTTCACTCGATGAACAAGCTCTTCAGGTGGTTCTCTGTCCAAGCAAACTTTAGATaGTTCCTCAGCTATATCAAA +
Preference number: 4 (lower is better)
Translates to: WVSSSFHSMNKLFRWFSVQANFR*FLSYIK
Trigger: TTTGATATAGCTGAGGAAGCATCTAAAGTTTGCTTG...GACAGAGAACCACCTGAAGAGCTTGTTCATCGAGTGAAAAGAAGAGCTGACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647979.1
ENST00000649227.1
CDS-3UTR GCA 90 bp AGCTCTTCAGGTGGTTCTCTGTCTACTAACCCTTTTGGGAGCAACTCTTCATTAGTATGTGAAAAGGTGTaGCAAGCAAACTTTAGATGC +
Preference number: 4 (lower is better)
Translates to: SSSGGSLSTNPFGSNSSLVCEKV*QANFRC
Trigger: GCATCTAAAGTTTGCTTGGCACACCTTTTCACATAC...TAATGAAGAGTTGCTCCCAAAAGGGTTAGTAGACAGAGAACCACCTGAAGAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647979.1
ENST00000649227.1
CDS-3UTR GCA 90 bp TTGCAGCAGGTGTCGTTGTTCAGATACATGATGCCAGGATCACACTCTTCTCCTTACCATAATTCTTTGTaGTCGTCAAACCACTATTCA +
Preference number: 4 (lower is better)
Translates to: LQQVSLFRYMMPGSHSSPYHNSL*SSNHYS
Trigger: TGAATAGTGGTTTGACGAGCACAAAGAATTATGGTA...AGGAGAAGAGTGTGATCCTGGCATCATGTATCTGAACAACGACACCTGCTGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp CTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAAGTATCCGGATCATGTTCTaGTCCAAAATTATGTCCCAA +
Preference number: 4 (lower is better)
Translates to: LFKRRRAKPHKNCLPAGSIRIMF*SKIMSQ
Trigger: TTGGGACATAATTTTGGAGCAGAACATGATCCGGAT...ACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp AAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAACACATGACCCACAAACTTTATTGCTaGGTTCTTGAAAACACTCCT +
Preference number: 4 (lower is better)
Translates to: KGQTTQELFTCRKFKHMTHKLYC*VLENTP
Trigger: AGGAGTGTTTTCAAGAACGCAGCAATAAAGTTTGTG...GGTCATGTGTTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp ATTGTTCTCGTGATCGCCACTCACAGCTATGGGATACATGACATATTTCCCTCCCACAAACTTTATTGCTaGGTTCTTGAAAACACTCCT +
Preference number: 4 (lower is better)
Translates to: IVLVIATHSYGIHDIFPSHKLYC*VLENTP
Trigger: AGGAGTGTTTTCAAGAACGCAGCAATAAAGTTTGTG...GGAGGGAAATATGTCATGTATCCCATAGCTGTGAGTGGCGATCACGAGAACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp CTGAGAACTAAATTAGCACTCTGTTTCTTTGCTGTCAACACGATTCTGACGCTGAGCACTCTGTTTCTTTaGTGTCAACACGATTCTGAC +
Preference number: 4 (lower is better)
Translates to: LRTKLALCFFAVNTILTLSTLFL*CQHDSD
Trigger: GTCAGAATCGTGTTGACAGCAAAGAAACAGAGTGCT...CAGCGTCAGAATCGTGTTGACAGCAAAGAAACAGAGTGCTAATTTAGTTCTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp CACAAACTTTATTGCTGCGTTCTTGAAAACACTCCTGGGCCTTACTTTCAATGGAAAATACAGAAAAACTaGCCAGCAAATCAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: HKLYCCVLENTPGPYFQWKIQKN*PANQGP
Trigger: AGGGCCCTGATTTGCTGGGCAGTTTTTCTGTATTTT...CCATTGAAAGTAAGGCCCAGGAGTGTTTTCAAGAACGCAGCAATAAAGTTTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649227.1
CDS-3UTR CCA 90 bp GTCAATGAAATCCCAAAATCGTTCAATTACATCCTGTACTCGTTTCTCACATTTGCATTAATCGCCTCCTaGCACTTCTTCTGGGCAGTC +
Preference number: 4 (lower is better)
Translates to: VNEIPKSFNYILYSFLTFALIAS*HFFWAV
Trigger: GACTGCCCAGAAGAAGTGCCAGGAGGCGATTAATGC...AAATGTGAGAAACGAGTACAGGATGTAATTGAACGATTTTGGGATTTCATTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp CAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAACACATGACCAGCATCTTCCATAAATTCAACTaGCTACCATGTATAGCCCTC +
Preference number: 4 (lower is better)
Translates to: QTTQELFTCRKFKHMTSIFHKFN*LPCIAL
Trigger: GAGGGCTATACATGGTAGCCAGTTGAATTTATGGAA...GATGCTGGTCATGTGTTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310823.8
ENST00000649227.1
CDS-3UTR TCA 90 bp TGCTGCGTTCTTGAAAACACTCCTGGGCCTTACTTTCAATGGTCTTATAGATTGTGGAGACTGCAAACGTaGAACATTCTTGATATCTTC +
Preference number: 4 (lower is better)
Translates to: CCVLENTPGPYFQWSYRLWRLQT*NILDIF
Trigger: GAAGATATCAAGAATGTTTCACGTTTGCAGTCTCCA...CAATCTATAAGACCATTGAAAGTAAGGCCCAGGAGTGTTTTCAAGAACGCAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp ACACTTAAGTCAGAAGAGCTGAGAACTAAATTAGCACTCTGTTTCTTTGCTGTCTGGGCAGTCTCAAACTaGCAGTTTTTACAGCAAGGA +
Preference number: 4 (lower is better)
Translates to: TLKSEELRTKLALCFFAVWAVSN*QFLQQG
Trigger: TCCTTGCTGTAAAAACTGTCAGTTTGAGACTGCCCA...GACAGCAAAGAAACAGAGTGCTAATTTAGTTCTCAGCTCTTCTGACTTAAGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp GTCTTTGGGGAAAGGAACTGGTTTGACAATAAACAGGCTGCAGAGACTTACTTTATGAAACTAGTGACATaGATGTCTTTGGGGAAAGGA +
Preference number: 4 (lower is better)
Translates to: VFGERNWFDNKQAAETYFMKLVT*MSLGKG
Trigger: TCCTTTCCCCAAAGACATTCATGTCACTAGTTTCAT...AAAGTAAGTCTCTGCAGCCTGTTTATTGTCAAACCAGTTCCTTTCCCCAAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618923.2
CDS-3UTR TCA 90 bp CAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAACACATGACCAGCATCGAACAAGCTCTAATATaGATTTGTATGCACTTCAGG +
Preference number: 4 (lower is better)
Translates to: QTTQELFTCRKFKHMTSIEQALI*ICMHFR
Trigger: CCTGAAGTGCATACAAATTCATATTAGAGCTTGTTC...GATGCTGGTCATGTGTTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647610.1
ENST00000650116.1
CDS-3UTR GCA 90 bp CTACCACCAATAATTTACACGTGTTCTTCATGGGATCTGGGTCAGCTCTTCTTTCACACTTTTGGAGACTaGAAACGTGAAACATTCTTG +
Preference number: 4 (lower is better)
Translates to: LPPIIYTCSSWDLGQLFFHTFGD*KRETFL
Trigger: CAAGAATGTTTCACGTTTGCAGTCTCCAAAAGTGTG...AAAGAAGAGCTGACCCAGATCCCATGAAGAACACGTGTAAATTATTGGTGGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp GCAGGTAGTATTCTATCTCCTGGCTGGCTCATCACATTCAAAACAACCTGTTTTGTATGTGAAAAGGTGTaGCAAGCAAACTTTAGATGC +
Preference number: 4 (lower is better)
Translates to: AGSILSPGWLITFKTTCFVCEKV*QANFRC
Trigger: GCATCTAAAGTTTGCTTGGCACACCTTTTCACATAC...AAAACAGGTTGTTTTGAATGTGATGAGCCAGCCAGGAGATAGAATACTACCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310823.8
CDS-3UTR GCA 90 bp CCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAAGTACCATAATTCTTTGTaGTCGTCAAACCACTATTCA +
Preference number: 4 (lower is better)
Translates to: PFQKEKGQTTQELFTCRKYHNSL*SSNHYS
Trigger: TGAATAGTGGTTTGACGAGCACAAAGAATTATGGTA...CTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp CACAAACTTTATTGCTGCGTTCTTGAAAACACTCCTGGGCCTTACTTTCAATGGATCCGGATCATGTTCTaGTCCAAAATTATGTCCCAA +
Preference number: 4 (lower is better)
Translates to: HKLYCCVLENTPGPYFQWIRIMF*SKIMSQ
Trigger: TTGGGACATAATTTTGGAGCAGAACATGATCCGGAT...CCATTGAAAGTAAGGCCCAGGAGTGTTTTCAAGAACGCAGCAATAAAGTTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp CACCTTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGTCCCACAAACTTTATTaGTGCGTTCTTGAAAACACT +
Preference number: 4 (lower is better)
Translates to: HLTFSKGEGPNHTRTVYLSHKLY*CVLENT
Trigger: AGTGTTTTCAAGAACGCAGCAATAAAGTTTGTGGGA...CAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAAGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp ACTGTTTACCTGCAGGAAGTTCAAACACATGACCAGCATCTGCTAAGTCACTTCCTCGTTTCTCACATTTaGCATTCATGTCACAAAATC +
Preference number: 4 (lower is better)
Translates to: TVYLQEVQTHDQHLLSHFLVSHI*HSCHKI
Trigger: GATTTTGTGACATGAATGGCAAATGTGAGAAACGAG...GAAGTGACTTAGCAGATGCTGGTCATGTGTTTGAACTTCCTGCAGGTAAACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp ACCTTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCCAAATAAATGCCAAATaGCTCATATTCAGCGGTTCA +
Preference number: 4 (lower is better)
Translates to: TLPFQKEKGQTTQELFTCQINAK*LIFSGS
Trigger: TGAACCGCTGAATATGAGGCATTTGGCATTTATTTG...GCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310823.8
ENST00000647979.1
ENST00000649227.1
CDS-3UTR CCA 90 bp GACATGAATGTCTTTGGGGAAAGGAACTGGTTTGACAATAAACAGGCTGCAGAGCTTACCGAATGCTGCTaGATATTAGATAAAGAGAGA +
Preference number: 4 (lower is better)
Translates to: DMNVFGERNWFDNKQAAELTECC*ILDKER
Trigger: TCTCTCTTTATCTAATATCCAGCAGCATTCGGTAAG...CTCTGCAGCCTGTTTATTGTCAAACCAGTTCCTTTCCCCAAAGACATTCATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618923.2
CDS-3UTR CCA 90 bp AACTGGTTTGACAATAAACAGGCTGCAGAGACTTACTTTTCACTGGCTTTTGTAGTTCTTCATGGGATCTaGGTCAGCTCTTCTTTTCAC +
Preference number: 4 (lower is better)
Translates to: NWFDNKQAAETYFSLAFVVLHGI*VSSSFH
Trigger: GTGAAAAGAAGAGCTGACCCAGATCCCATGAAGAAC...TACAAAAGCCAGTGAAAAGTAAGTCTCTGCAGCCTGTTTATTGTCAAACCAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000618923.2
CDS-3UTR CCA 90 bp CACCTTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGGTATTGATGCTCAGCTaGTCAATGAAATCCCAAAAT +
Preference number: 4 (lower is better)
Translates to: HLTFSKGEGPNHTRTVYLVLMLS*SMKSQN
Trigger: ATTTTGGGATTTCATTGACCAGCTGAGCATCAATAC...CAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAAGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp GCAGGTAGTATTCTATCTCCTGGCTGGCTCATCACATTCAAAACAACCTGTTTTATTCTATCTCCTGGCTaGCTCATCACATTCAAAACA +
Preference number: 4 (lower is better)
Translates to: AGSILSPGWLITFKTTCFILSPG*LITFKT
Trigger: TGTTTTGAATGTGATGAGCCAGCCAGGAGATAGAAT...AAAACAGGTTGTTTTGAATGTGATGAGCCAGCCAGGAGATAGAATACTACCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310823.8
CDS-3UTR CCA 90 bp AGGCTGCAGAGACTTACTTTTCACTGGCTTTTGTACTGTGTACATGTTACCTATTCCTGTTTCTTCGACTaGTTCCAAATGCCTAAAGCA +
Preference number: 4 (lower is better)
Translates to: RLQRLTFHWLLYCVHVTYSCFFD*FQMPKA
Trigger: TGCTTTAGGCATTTGGAACCAGTCGAAGAAACAGGA...ATAGGTAACATGTACACAGTACAAAAGCCAGTGAAAAGTAAGTCTCTGCAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618923.2
CDS-3UTR TCA 90 bp AACTGGTTTGACAATAAACAGGCTGCAGAGACTTACTTTTCACTGGCTTTTGTACCACCACCACGACCTTaGAATTTTGTGAAAAACGTT +
Preference number: 4 (lower is better)
Translates to: NWFDNKQAAETYFSLAFVPPPRP*NFVKNV
Trigger: AACGTTTTTCACAAAATTTCAAGGTCGTGGTGGTGG...TACAAAAGCCAGTGAAAAGTAAGTCTCTGCAGCCTGTTTATTGTCAAACCAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000618923.2
CDS-3UTR TCA 90 bp CAGGAGCCTAAAATATTTATTACGACTACAGTCGACAACTCAGGAAAGAATAATCAACCACGTGTCCAGTaGAGAAGTCCTGCCATTTTA +
Preference number: 4 (lower is better)
Translates to: QEPKIFITTTVDNSGKNNQPRVQ*RSPAIL
Trigger: TAAAATGGCAGGACTTCTTCACTGGACACGTGGTTG...ATTATTCTTTCCTGAGTTGTCGACTGTAGTCGTAATAAATATTTTAGGCTCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618923.2
CDS-3UTR GCA 90 bp ACTGTTTACCTGCAGGAAGTTCAAACACATGACCAGCATCTGCTAAGTCACTTCTTTCTTACCGAATGCTaGTGGATATTAGATAAAGAG +
Preference number: 4 (lower is better)
Translates to: TVYLQEVQTHDQHLLSHFFLTEC*WILDKE
Trigger: CTCTTTATCTAATATCCAGCAGCATTCGGTAAGAAA...GAAGTGACTTAGCAGATGCTGGTCATGTGTTTGAACTTCCTGCAGGTAAACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310823.8
CDS-3UTR GCA 90 bp AGGCTGCAGAGACTTACTTTTCACTGGCTTTTGTACTGTGTACATGTTACCTATCACACTTTTGGAGACTaGAAACGTGAAACATTCTTG +
Preference number: 4 (lower is better)
Translates to: RLQRLTFHWLLYCVHVTYHTFGD*KRETFL
Trigger: CAAGAATGTTTCACGTTTGCAGTCTCCAAAAGTGTG...ATAGGTAACATGTACACAGTACAAAAGCCAGTGAAAAGTAAGTCTCTGCAGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000618923.2
CDS-3UTR GCA 90 bp TTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGATTTGGGTAACTTTTTaGCATGTTGTAGTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: LPFQKEKGQTTQELFTCRIWVTF*HVVVLF
Trigger: GAAAAGCACTACAACATGGCAAAAAGTTACCCAAAT...CCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp CACCTTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGATTTGGGTAACTTTTTaGCATGTTGTAGTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: HLTFSKGEGPNHTRTVYLIWVTF*HVVVLF
Trigger: GAAAAGCACTACAACATGGCAAAAAGTTACCCAAAT...CAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAAGGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp CAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAACAAGCAAACTTTAGATaGTTCCTCAGCTATATCAAA +
Preference number: 4 (lower is better)
Translates to: QKEKGQTTQELFTCRKFKQANFR*FLSYIK
Trigger: TTTGATATAGCTGAGGAAGCATCTAAAGTTTGCTTG...TTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp CCAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAACACATGACCAGCATCAAGCAAACTTTAGATaGTTCCTCAGCTATATCAAA +
Preference number: 4 (lower is better)
Translates to: PNHTRTVYLQEVQTHDQHQANFR*FLSYIK
Trigger: TTTGATATAGCTGAGGAAGCATCTAAAGTTTGCTTG...ATGCTGGTCATGTGTTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp CCAATAATTTACACGTGTTCTTCATGGGATCTGGGTCAGCTCTTCTTTTCACTCTCCCACAAACTTTATTaGTGCGTTCTTGAAAACACT +
Preference number: 4 (lower is better)
Translates to: PIIYTCSSWDLGQLFFSLSHKLY*CVLENT
Trigger: AGTGTTTTCAAGAACGCAGCAATAAAGTTTGTGGGA...GAGTGAAAAGAAGAGCTGACCCAGATCCCATGAAGAACACGTGTAAATTATTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp GACCCAACGATGTTGTCTGCTAAAAACTTTCCAAAAGTATTGATGCTCAGCTGGCTCGTTTCTCACATTTaGCATTCATGTCACAAAATC +
Preference number: 4 (lower is better)
Translates to: DPTMLSAKNFPKVLMLSWLVSHI*HSCHKI
Trigger: GATTTTGTGACATGAATGGCAAATGTGAGAAACGAG...CCAGCTGAGCATCAATACTTTTGGAAAGTTTTTAGCAGACAACATCGTTGGGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp ACACTTAAGTCAGAAGAGCTGAGAACTAAATTAGCACTCTGTTTCTTTGCTGTCTCCAGCTGTATTTTCTaGTTTTGCACCACAGGTCAA +
Preference number: 4 (lower is better)
Translates to: TLKSEELRTKLALCFFAVSSCIF*FCTTGQ
Trigger: TTGACCTGTGGTGCAAAAGCAGAAAATACAGCTGGA...GACAGCAAAGAAACAGAGTGCTAATTTAGTTCTCAGCTCTTCTGACTTAAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp GCAGGTAGTATTCTATCTCCTGGCTGGCTCATCACATTCAAAACAACCTGTTTTCTTACCGAATGCTGCTaGATATTAGATAAAGAGAGA +
Preference number: 4 (lower is better)
Translates to: AGSILSPGWLITFKTTCFLTECC*ILDKER
Trigger: TCTCTCTTTATCTAATATCCAGCAGCATTCGGTAAG...AAAACAGGTTGTTTTGAATGTGATGAGCCAGCCAGGAGATAGAATACTACCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310823.8
CDS-3UTR CCA 90 bp TTGACAATAAACAGGCTGCAGAGACTTACTTTTCACTGGCTTTTGTACTGTGTATCATCATCTCTTATGTaGGCTAGAACCCTAGAGTCA +
Preference number: 4 (lower is better)
Translates to: LTINRLQRLTFHWLLYCVSSSLM*ARTLES
Trigger: TGACTCTAGGGTTCTAGCCCACATAAGAGATGATGA...TACACAGTACAAAAGCCAGTGAAAAGTAAGTCTCTGCAGCCTGTTTATTGTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618923.2
CDS-3UTR CCA 90 bp TGCACACTTAAGTCAGAAGAGCTGAGAACTAAATTAGCACTCTGTTTCTTTGCTTCATCATCTCTTATGTaGGCTAGAACCCTAGAGTCA +
Preference number: 4 (lower is better)
Translates to: CTLKSEELRTKLALCFFASSSLM*ARTLES
Trigger: TGACTCTAGGGTTCTAGCCCACATAAGAGATGATGA...AGCAAAGAAACAGAGTGCTAATTTAGTTCTCAGCTCTTCTGACTTAAGTGTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp CAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAAGGGCCTTACTTTCAATaGTCTTATAGATTGATTGTT +
Preference number: 4 (lower is better)
Translates to: QKEKGQTTQELFTCRKFKGPYFQ*SYRLIV
Trigger: AACAATCAATCTATAAGACCATTGAAAGTAAGGCCC...TTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp CAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAACACATGACCAGCATCGGGCCTTACTTTCAATaGTCTTATAGATTGATTGTT +
Preference number: 4 (lower is better)
Translates to: QTTQELFTCRKFKHMTSIGPYFQ*SYRLIV
Trigger: AACAATCAATCTATAAGACCATTGAAAGTAAGGCCC...GATGCTGGTCATGTGTTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp TGCTGCGTTCTTGAAAACACTCCTGGGCCTTACTTTCAATGGTCTTATAGATTGGTATTGATGCTCAGCTaGTCAATGAAATCCCAAAAT +
Preference number: 4 (lower is better)
Translates to: CCVLENTPGPYFQWSYRLVLMLS*SMKSQN
Trigger: ATTTTGGGATTTCATTGACCAGCTGAGCATCAATAC...CAATCTATAAGACCATTGAAAGTAAGGCCCAGGAGTGTTTTCAAGAACGCAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CCA 90 bp CACAAACTTTATTGCTGCGTTCTTGAAAACACTCCTGGGCCTTACTTTCAATGGAATGCCGAATGCTGCTaGATATTAGATAAAGAGAGA +
Preference number: 4 (lower is better)
Translates to: HKLYCCVLENTPGPYFQWNAECC*ILDKER
Trigger: TCTCTCTTTATCTAATATCCAGCAGCATTCGGCATT...CCATTGAAAGTAAGGCCCAGGAGTGTTTTCAAGAACGCAGCAATAAAGTTTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650116.1
CDS-3UTR TCA 90 bp AACTGGTTTGACAATAAACAGGCTGCAGAGACTTACTTTTCACTGGCTTTTGTATGGAGACTGCAAACGTaGAACATTCTTGATATCTTC +
Preference number: 4 (lower is better)
Translates to: NWFDNKQAAETYFSLAFVWRLQT*NILDIF
Trigger: GAAGATATCAAGAATGTTTCACGTTTGCAGTCTCCA...TACAAAAGCCAGTGAAAAGTAAGTCTCTGCAGCCTGTTTATTGTCAAACCAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618923.2
CDS-3UTR TCA 90 bp TCTTTGGTATCATTAACAAATCTCCAAAGTGGCTCTATGTTATATTCGGCCCCACAAAATCTTGGTATGTaGAAAGGTGTGCCAAGCAAA +
Preference number: 4 (lower is better)
Translates to: SLVSLTNLQSGSMLYSAPQNLGM*KGVPSK
Trigger: TTTGCTTGGCACACCTTTTCACATACCAAGATTTTG...TGGGGCCGAATATAACATAGAGCCACTTTGGAGATTTGTTAATGATACCAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649227.1
ENST00000650116.1
CDS-3UTR TCA 90 bp GTCAATGAAATCCCAAAATCGTTCAATTACATCCTGTACTCGTTTCTCACATTTATCTTATTGTTCTCGTaGTCGCCACTCACAGCTATG +
Preference number: 4 (lower is better)
Translates to: VNEIPKSFNYILYSFLTFILLFS*SPLTAM
Trigger: CATAGCTGTGAGTGGCGATCACGAGAACAATAAGAT...AAATGTGAGAAACGAGTACAGGATGTAATTGAACGATTTTGGGATTTCATTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp CCAATAATTTACACGTGTTCTTCATGGGATCTGGGTCAGCTCTTCTTTTCACTCATTTGGGTAACTTTTTaGCATGTTGTAGTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: PIIYTCSSWDLGQLFFSLIWVTF*HVVVLF
Trigger: GAAAAGCACTACAACATGGCAAAAAGTTACCCAAAT...GAGTGAAAAGAAGAGCTGACCCAGATCCCATGAAGAACACGTGTAAATTATTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp CTACCACCAATAATTTACACGTGTTCTTCATGGGATCTGGGTCAGCTCTTCTTTTACCATAATTCTTTGTaGTCGTCAAACCACTATTCA +
Preference number: 4 (lower is better)
Translates to: LPPIIYTCSSWDLGQLFFYHNSL*SSNHYS
Trigger: TGAATAGTGGTTTGACGAGCACAAAGAATTATGGTA...AAAGAAGAGCTGACCCAGATCCCATGAAGAACACGTGTAAATTATTGGTGGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR GCA 90 bp GAAGAGCTGAGAACTAAATTAGCACTCTGTTTCTTTGCTGTCAACACGATTCTGCAAATAAATGCCAAATaGCTCATATTCAGCGGTTCA +
Preference number: 4 (lower is better)
Translates to: EELRTKLALCFFAVNTILQINAK*LIFSGS
Trigger: TGAACCGCTGAATATGAGGCATTTGGCATTTATTTG...CAGAATCGTGTTGACAGCAAAGAAACAGAGTGCTAATTTAGTTCTCAGCTCTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647979.1
ENST00000649227.1
CDS-3UTR GCA 90 bp GCAGGTAGTATTCTATCTCCTGGCTGGCTCATCACATTCAAAACAACCTGTTTTGTCATCACAAATAAATaGCAAATGCCTCATATTCAG +
Preference number: 4 (lower is better)
Translates to: AGSILSPGWLITFKTTCFVITNK*QMPHIQ
Trigger: CTGAATATGAGGCATTTGGCATTTATTTGTGATGAC...AAAACAGGTTGTTTTGAATGTGATGAGCCAGCCAGGAGATAGAATACTACCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310823.8
CDS-3UTR CCA 90 bp TCACCTTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTTCAAATATCTGCTTGTaGGTCAATAAAAAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: SPYLFKRRRAKPHKNCLPSNICL*VNKKGF
Trigger: GAAACCCTTTTTATTGACCCACAAGCAGATATTTGA...AGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAAGGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310823.8
CDS-3UTR TCA 90 bp TGTTTCTTCGACTGGTTCCAAATGCCTAAAGCAAAAAGAAAATTTACAGGTTCCGAGAATATCGTAGTCTaGGAGCAAAGAATCAAGCTT +
Preference number: 4 (lower is better)
Translates to: CFFDWFQMPKAKRKFTGSENIVV*EQRIKL
Trigger: AAGCTTGATTCTTTGCTCTCAGACTACGATATTCTC...GGAACCTGTAAATTTTCTTTTTGCTTTAGGCATTTGGAACCAGTCGAAGAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618923.2
CDS-3UTR GCA 90 bp ATTGCTGCGTTCTTGAAAACACTCCTGGGCCTTACTTTCAATGGTCTTATAGATGTCATCACAAATAAATaGCAAATGCCTCATATTCAG +
Preference number: 4 (lower is better)
Translates to: IAAFLKTLLGLTFNGLIDVITNK*QMPHIQ
Trigger: CTGAATATGAGGCATTTGGCATTTATTTGTGATGAC...ATCTATAAGACCATTGAAAGTAAGGCCCAGGAGTGTTTTCAAGAACGCAGCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647979.1
ENST00000649227.1
CDS-3UTR CCA 90 bp GGTTTGACAATAAACAGGCTGCAGAGACTTACTTTTCACTGGCTTTTGTACTGTAGACTTACTTTTCACTaGCTTTTGTACTGTGTACAT +
Preference number: 4 (lower is better)
Translates to: GLTINRLQRLTFHWLLYCRLTFH*LLYCVH
Trigger: ATGTACACAGTACAAAAGCCAGTGAAAAGTAAGTCT...ACAGTACAAAAGCCAGTGAAAAGTAAGTCTCTGCAGCCTGTTTATTGTCAAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000618923.2
CDS-3UTR GCA 90 bp AGGAATAAAAGGCTAAGAATAGAGTCTTCTCCTTATACAGGCATTTCAGACAAATTTCTTACCGAATGCTaGTGGATATTAGATAAAGAG +
Preference number: 4 (lower is better)
Translates to: RNKRLRIESSPYTGISDKFLTEC*WILDKE
Trigger: CTCTTTATCTAATATCCAGCAGCATTCGGTAAGAAA...TTTGTCTGAAATGCCTGTATAAGGAGAAGACTCTATTCTTAGCCTTTTATTCCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618923.2
CDS-3UTR GCA 90 bp GTCAATGAAATCCCAAAATCGTTCAATTACATCCTGTACTCGTTTCTCACATTTCAAGCAAACTTTAGATaGTTCCTCAGCTATATCAAA +
Preference number: 4 (lower is better)
Translates to: VNEIPKSFNYILYSFLTFQANFR*FLSYIK
Trigger: TTTGATATAGCTGAGGAAGCATCTAAAGTTTGCTTG...AAATGTGAGAAACGAGTACAGGATGTAATTGAACGATTTTGGGATTTCATTGAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS GCA 90 bp CGCCTACTGGGAAGATTCTACCGCCAGGCTCGACGCCCCCAGAAGTaGAGGTGGCGTTACCAAAGGCCGGCTCAGCCAGCTTCCGGCCGC +
Preference number: 5 (lower is better)
Translates to: RLLGRFYRQARRPQK*RWRYQRPAQPASGR
Trigger: GCGGCCGGAAGCTGGCTGAGCCGGCCTTTGGTAACGCCACCTGCACTTCTGGGGGCGTCGAGCCTGGCGGTAGAATCTTCCCAGTAGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310823.8
CDS CCA 90 bp CCGGGTCATCCGGAGGTCGCGGCGCCAGCACGAAAGGAACCACGCTaGTCAGGAATAGGAGAGACTGCCTCATGTTCCCGGCCCCGCTAC +
Preference number: 5 (lower is better)
Translates to: PGHPEVAAPARKEPR*SGIGETASCSRPRY
Trigger: GTAGCGGGGCCGGGAACATGAGGCAGTCTCTCCTATTCCTGACCAGCGTGGTTCCTTTCGTGCTGGCGCCGCGACCTCCGGATGACCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000310823.8
ENST00000478059.1
ENST00000618923.2
ENST00000647610.1
ENST00000647622.1
ENST00000647979.1
ENST00000649227.1
ENST00000649972.1
ENST00000650116.1
CDS-3UTR CAA 90 bp TTCCTGGATGGTGTCCATTCTCTGGTGGTCCAGTTTTGGAGCTGCTGGCGCCGACACCTCCATGGCTGTTaGCTCTGGGAGAGCCAACAT +
Preference number: 5 (lower is better)
Translates to: FLDGVHSLVVQFWSCWRRHLHGC*LWESQH
Trigger: ATGTTGGCTCTCCCAGAGCAAACAGCCATGGAGGTG...TCGGCGCCAGCAGCTCCAAAACTGGACCACCAGAGAATGGACACCATCCAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp TCTCTGGTGGTCCAGTTTTGGAGCTGCTGGCGCCGAAGGGATCACAGGGGCAGGTTGCAGCAGGTGTCGTaGTTCAGATACATGATGCCA +
Preference number: 5 (lower is better)
Translates to: SLVVQFWSCWRRRDHRGRLQQVS*FRYMMP
Trigger: TGGCATCATGTATCTGAACAACGACACCTGCTGCAA...CCTGCCCCTGTGATCCCTTCGGCGCCAGCAGCTCCAAAACTGGACCACCAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp GTCACTGCACTGGACACCTTCCTTCAACGTGCAGTCGCTGTTGCAGCAGGTGTCAACGTGCAGTCGCTGTaGCAGCAGGTGTCGTTGTTC +
Preference number: 5 (lower is better)
Translates to: VTALDTFLQRAVAVAAGVNVQSL*QQVSLF
Trigger: GAACAACGACACCTGCTGCAACAGCGACTGCACGTT...GACACCTGCTGCAACAGCGACTGCACGTTGAAGGAAGGTGTCCAGTGCAGTGAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp TCCATTCTCTGGTGGTCCAGTTTTGGAGCTGCTGGCGCCGAAGGGATCACAGGGCAGCTGTGCTGCTATTaGGGAAGGGGTCCTTCTCAA +
Preference number: 5 (lower is better)
Translates to: SILWWSSFGAAGAEGITGQLCCY*GRGPSQ
Trigger: TTGAGAAGGACCCCTTCCCAAATAGCAGCACAGCTG...CCCTGTGATCCCTTCGGCGCCAGCAGCTCCAAAACTGGACCACCAGAGAATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp TCCCTCCCTGGTCCTCATTCGGGGCACATTCTGCTAGACCATCCGGATCATGTTAACGTGCAGTCGCTGTaGCAGCAGGTGTCGTTGTTC +
Preference number: 5 (lower is better)
Translates to: SLPGPHSGHILLDHPDHVNVQSL*QQVSLF
Trigger: GAACAACGACACCTGCTGCAACAGCGACTGCACGTT...AACATGATCCGGATGGTCTAGCAGAATGTGCCCCGAATGAGGACCAGGGAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp CACAGGACTCCAGCTGCTGTTCCCTCTCGCAGAAAGGGATGCATTTCCCATCCTGGCGCAGGAAAGGGTTaGATAATGCGAACCGATGCA +
Preference number: 5 (lower is better)
Translates to: HRTPAAVPSRRKGCISHPGAGKG*IMRTDA
Trigger: TGCATCGGTTCGCATTATCAAACCCTTTCCTGCGCC...AGGATGGGAAATGCATCCCTTTCTGCGAGAGGGAACAGCAGCTGGAGTCCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp GTCACTGCACTGGACACCTTCCTTCAACGTGCAGTCGCTGTTGCAGCAGGTGTCACCTCTTGTGGAGACTaGAGAATGCGAATCTGCTCT +
Preference number: 5 (lower is better)
Translates to: VTALDTFLQRAVAVAAGVTSCGD*RMRICS
Trigger: AGAGCAGATTCGCATTCTCAAGTCTCCACAAGAGGT...GACACCTGCTGCAACAGCGACTGCACGTTGAAGGAAGGTGTCCAGTGCAGTGAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp AGCATTTCCTGGAGGCGGGCACTCACTGCTATTACCTGTGCAGTAGGACACGCCACCTCTTGTGGAGACTaGAGAATGCGAATCTGCTCT +
Preference number: 5 (lower is better)
Translates to: SISWRRALTAITCAVGHATSCGD*RMRICS
Trigger: AGAGCAGATTCGCATTCTCAAGTCTCCACAAGAGGT...GGCGTGTCCTACTGCACAGGTAATAGCAGTGAGTGCCCGCCTCCAGGAAATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp GTCACTGCACTGGACACCTTCCTTCAACGTGCAGTCGCTGTTGCAGCAGGTGTCGGCTATAATAAGCCTTaGGACAAACACCTCCATGGC +
Preference number: 5 (lower is better)
Translates to: VTALDTFLQRAVAVAAGVGYNKP*DKHLHG
Trigger: GCCATGGAGGTGTTTGTCCAAAGGCTTATTATAGCC...GACACCTGCTGCAACAGCGACTGCACGTTGAAGGAAGGTGTCCAGTGCAGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp GCACAGGACTCCAGCTGCTGTTCCCTCTCGCAGAAAGGGATGCATTTCCCATCCTTGCAGCAGGTGTCGTaGTTCAGATACATGATGCCA +
Preference number: 5 (lower is better)
Translates to: AQDSSCCSLSQKGMHFPSLQQVS*FRYMMP
Trigger: TGGCATCATGTATCTGAACAACGACACCTGCTGCAA...GGATGGGAAATGCATCCCTTTCTGCGAGAGGGAACAGCAGCTGGAGTCCTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp AAGGGGTCCTTCTCAAACCCATCCTCGTCCATATGTGAGTCTGTGCTGGGGTCTGGCGCAGGAAAGGGTTaGATAATGCGAACCGATGCA +
Preference number: 5 (lower is better)
Translates to: KGSFSNPSSSICESVLGSGAGKG*IMRTDA
Trigger: TGCATCGGTTCGCATTATCAAACCCTTTCCTGCGCC...AGACCCCAGCACAGACTCACATATGGACGAGGATGGGTTTGAGAAGGACCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp TTGTACTCTCTTCCCCTCTGCCCATGTATCTGTAGAAGCGATGATCTGCTACCATCTGGTGGTCCAGTTTaGGAGCTGCTGGCGCCGAAG +
Preference number: 5 (lower is better)
Translates to: LYSLPLCPCICRSDDLLPSGGPV*ELLAPK
Trigger: CTTCGGCGCCAGCAGCTCCAAAACTGGACCACCAGA...TGGTAGCAGATCATCGCTTCTACAGATACATGGGCAGAGGGGAAGAGAGTACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS GCA 90 bp AGACACAGGCAACCTAGCAGTGGTGCTCTAGAGACCAGCACATCCTaGCTCTGTGACTACACAATGACACTCCTCAGTACCCAGAGAAAC +
Preference number: 5 (lower is better)
Translates to: RHRQPSSGALETSTS*LCDYTMTLLSTQRN
Trigger: GTTTCTCTGGGTACTGAGGAGTGTCATTGTGTAGTCACAGAGGCAGGATGTGCTGGTCTCTAGAGCACCACTGCTAGGTTGCCTGTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647622.1
ENST00000649972.1
ENST00000650241.1
CDS CCA 90 bp GAGGAAGGGAGCCTGGCAGACAAAGGCCATGTTTTCTCCTGCTGCTaGACTGGGAATAAAACTGCTCACCATTACATGCACAGGACTCCA +
Preference number: 5 (lower is better)
Translates to: EEGSLADKGHVFSCC*TGNKTAHHYMHRTP
Trigger: TGGAGTCCTGTGCATGTAATGGTGAGCAGTTTTATTCCCAGTCCAGCAGCAGGAGAAAACATGGCCTTTGTCTGCCAGGCTCCCTTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649068.1
CDS-3UTR CAA 90 bp CACAGGACTCCAGCTGCTGTTCCCTCTCGCAGAAAGGGATGCATTTCCCATCCTACCTCTTGTGGAGACTaGAGAATGCGAATCTGCTCT +
Preference number: 5 (lower is better)
Translates to: HRTPAAVPSRRKGCISHPTSCGD*RMRICS
Trigger: AGAGCAGATTCGCATTCTCAAGTCTCCACAAGAGGT...AGGATGGGAAATGCATCCCTTTCTGCGAGAGGGAACAGCAGCTGGAGTCCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp GCTATTACCTGTGCAGTAGGACACGCCTTTGCAAGTAGCATTAATCGCCTCCTGCACCTCCATGGCTGTTaGCTCTGGGAGAGCCAACAT +
Preference number: 5 (lower is better)
Translates to: AITCAVGHAFASSINRLLHLHGC*LWESQH
Trigger: ATGTTGGCTCTCCCAGAGCAAACAGCCATGGAGGTG...CAGGAGGCGATTAATGCTACTTGCAAAGGCGTGTCCTACTGCACAGGTAATAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp TTCCTGGATGGTGTCCATTCTCTGGTGGTCCAGTTTTGGAGCTGCTGGCGCCGATTCCCATCCTTACACTaGCCAAGATCCAAGCAAACA +
Preference number: 5 (lower is better)
Translates to: FLDGVHSLVVQFWSCWRRFPSLH*PRSKQT
Trigger: TGTTTGCTTGGATCTTGGCAAGTGTAAGGATGGGAA...TCGGCGCCAGCAGCTCCAAAACTGGACCACCAGAGAATGGACACCATCCAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp CCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAAGTCTGGTGGTCCAGTTTaGGAGCTGCTGGCGCCGAAG +
Preference number: 5 (lower is better)
Translates to: PFQKEKGQTTQELFTCRKSGGPV*ELLAPK
Trigger: CTTCGGCGCCAGCAGCTCCAAAACTGGACCACCAGA...CTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp CAGCATCGACATAGGGCACACAGCGGCCAGAAAGGTCCCTGCAGCACACCTTGCCTGTATTTTCTGCTTTaGCACCACAGGTCAAAAGAT +
Preference number: 5 (lower is better)
Translates to: QHRHRAHSGQKGPCSTPCLYFLL*HHRSKD
Trigger: ATCTTTTGACCTGTGGTGCAAAAGCAGAAAATACAG...GCAAGGTGTGCTGCAGGGACCTTTCTGGCCGCTGTGTGCCCTATGTCGATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS GCA 90 bp ATGGAGGAAGGGAGCCTGGCAGACAAAGGCCATGTTTTCTCCTGCTaGTGGACTGGGAATAAAACTGCTCACCATTACATGCACAGGACT +
Preference number: 5 (lower is better)
Translates to: MEEGSLADKGHVFSC*WTGNKTAHHYMHRT
Trigger: AGTCCTGTGCATGTAATGGTGAGCAGTTTTATTCCCAGTCCAGCAGCAGGAGAAAACATGGCCTTTGTCTGCCAGGCTCCCTTCCTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649068.1
CDS-3UTR CAA 90 bp TTCAGCATTTCCTGGAGGCGGGCACTCACTGCTATTACCTGTGCAGTAGGACACACCAGGTTTTACCTCTaGTGGAGACTTGAGAATGCG +
Preference number: 5 (lower is better)
Translates to: FSISWRRALTAITCAVGHTRFYL*WRLENA
Trigger: CGCATTCTCAAGTCTCCACAAGAGGTAAAACCTGGT...GTGTCCTACTGCACAGGTAATAGCAGTGAGTGCCCGCCTCCAGGAAATGCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp ATTACCTGTGCAGTAGGACACGCCTTTGCAAGTAGCATTAATCGCCTCCTGGCATCCCTGCAGCACACCTaGCAGGAGTTGTCAGTTTCA +
Preference number: 5 (lower is better)
Translates to: ITCAVGHAFASSINRLLASLQHT*QELSVS
Trigger: TGAAACTGACAACTCCTGCAAGGTGTGCTGCAGGGA...TGCCAGGAGGCGATTAATGCTACTTGCAAAGGCGTGTCCTACTGCACAGGTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp TTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGTCTGGTGGTCCAGTTTaGGAGCTGCTGGCGCCGAAG +
Preference number: 5 (lower is better)
Translates to: LPFQKEKGQTTQELFTCRSGGPV*ELLAPK
Trigger: CTTCGGCGCCAGCAGCTCCAAAACTGGACCACCAGA...CCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp TTCCTGGATGGTGTCCATTCTCTGGTGGTCCAGTTTTGGAGCTGCTGGCGCCGATGTCTACTAACCCTTTaGGGAGCAACTCTTCATTAT +
Preference number: 5 (lower is better)
Translates to: FLDGVHSLVVQFWSCWRRCLLTL*GATLHY
Trigger: ATAATGAAGAGTTGCTCCCAAAAGGGTTAGTAGACA...TCGGCGCCAGCAGCTCCAAAACTGGACCACCAGAGAATGGACACCATCCAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp CATCCACCCTCGAGTTCCCACAAACTTTATTGCTGCGTTCTTGAAAACACTCCTCACCTCCATGGCTGTTaGCTCTGGGAGAGCCAACAT +
Preference number: 5 (lower is better)
Translates to: HPPSSSHKLYCCVLENTPHLHGC*LWESQH
Trigger: ATGTTGGCTCTCCCAGAGCAAACAGCCATGGAGGTG...AGGAGTGTTTTCAAGAACGCAGCAATAAAGTTTGTGGGAACTCGAGGGTGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp ATCTTCAGCATTTCCTGGAGGCGGGCACTCACTGCTATTACCTGTGCAGTAGGATTGCAGCAGGTGTCGTaGTTCAGATACATGATGCCA +
Preference number: 5 (lower is better)
Translates to: IFSISWRRALTAITCAVGLQQVS*FRYMMP
Trigger: TGGCATCATGTATCTGAACAACGACACCTGCTGCAA...TCCTACTGCACAGGTAATAGCAGTGAGTGCCCGCCTCCAGGAAATGCTGAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp AGGACTGTTCCTGTCACTGCACTGGACACCTTCCTTCAACGTGCAGTCGCTGTTCACACCTTGCAGGAGTaGTCAGTTTCATTACATGCA +
Preference number: 5 (lower is better)
Translates to: RTVPVTALDTFLQRAVAVHTLQE*SVSLHA
Trigger: TGCATGTAATGAAACTGACAACTCCTGCAAGGTGTG...AACAGCGACTGCACGTTGAAGGAAGGTGTCCAGTGCAGTGACAGGAACAGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp ACTGGACACCTTCCTTCAACGTGCAGTCGCTGTTGCAGCAGGTGTCGTTGTTCACACACCTTGCAGGAGTaGTCAGTTTCATTACATGCA +
Preference number: 5 (lower is better)
Translates to: TGHLPSTCSRCCSRCRCSHTLQE*SVSLHA
Trigger: TGCATGTAATGAAACTGACAACTCCTGCAAGGTGTG...TGAACAACGACACCTGCTGCAACAGCGACTGCACGTTGAAGGAAGGTGTCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp GTCACTGCACTGGACACCTTCCTTCAACGTGCAGTCGCTGTTGCAGCAGGTGTCAACTTTCCAAAAGTATaGATGCTCAGCTGGTCAATG +
Preference number: 5 (lower is better)
Translates to: VTALDTFLQRAVAVAAGVNFPKV*MLSWSM
Trigger: CATTGACCAGCTGAGCATCAATACTTTTGGAAAGTT...GACACCTGCTGCAACAGCGACTGCACGTTGAAGGAAGGTGTCCAGTGCAGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS TCA 90 bp GTCACTTATTGTTCTCGTGATCGCCACTCACAGCTATGGGATACATaGCATATTTCCCTCCCTGGTCCTCATTCGGGGCACATTCTGCTA +
Preference number: 5 (lower is better)
Translates to: VTYCSRDRHSQLWDT*HISLPGPHSGHILL
Trigger: TAGCAGAATGTGCCCCGAATGAGGACCAGGGAGGGAAATATGTCATGTATCCCATAGCTGTGAGTGGCGATCACGAGAACAATAAGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647622.1
CDS-3UTR CAA 90 bp ACCTTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCCACCTCCATGGCTGTTaGCTCTGGGAGAGCCAACAT +
Preference number: 5 (lower is better)
Translates to: TLPFQKEKGQTTQELFTCHLHGC*LWESQH
Trigger: ATGTTGGCTCTCCCAGAGCAAACAGCCATGGAGGTG...GCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp TTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGCACCTCCATGGCTGTTaGCTCTGGGAGAGCCAACAT +
Preference number: 5 (lower is better)
Translates to: LPFQKEKGQTTQELFTCRHLHGC*LWESQH
Trigger: ATGTTGGCTCTCCCAGAGCAAACAGCCATGGAGGTG...CCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp TGCAGGAGTTGTCAGTTTCATTACATGCACAGGACTCCAGCTGCTGTTCCCTCTGGCTATAATAAGCCTTaGGACAAACACCTCCATGGC +
Preference number: 5 (lower is better)
Translates to: CRSCQFHYMHRTPAAVPSGYNKP*DKHLHG
Trigger: GCCATGGAGGTGTTTGTCCAAAGGCTTATTATAGCC...AGAGGGAACAGCAGCTGGAGTCCTGTGCATGTAATGAAACTGACAACTCCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp ATTGTTCTCGTGATCGCCACTCACAGCTATGGGATACATGACATATTTCCCTCCTCCCTGCAGCACACCTaGCAGGAGTTGTCAGTTTCA +
Preference number: 5 (lower is better)
Translates to: IVLVIATHSYGIHDIFPSSLQHT*QELSVS
Trigger: TGAAACTGACAACTCCTGCAAGGTGTGCTGCAGGGA...GGAGGGAAATATGTCATGTATCCCATAGCTGTGAGTGGCGATCACGAGAACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp CTTCTGGTGACCGGATGGTCCGTGAGATCCTCAAATGACTTGGCAGCTGTGCTGAACTTTCCAAAAGTATaGATGCTCAGCTGGTCAATG +
Preference number: 5 (lower is better)
Translates to: LLVTGWSVRSSNDLAAVLNFPKV*MLSWSM
Trigger: CATTGACCAGCTGAGCATCAATACTTTTGGAAAGTT...CAGCACAGCTGCCAAGTCATTTGAGGATCTCACGGACCATCCGGTCACCAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp CGTCCATATGTGAGTCTGTGCTGGGGTCTTCCTGGATGGTGTCCATTCTCTGGTACAGACCCAACGATGTaGTCTGCTAAAAACTTTCCA +
Preference number: 5 (lower is better)
Translates to: RPYVSLCWGLPGWCPFSGTDPTM*SAKNFP
Trigger: TGGAAAGTTTTTAGCAGACAACATCGTTGGGTCTGT...ACCAGAGAATGGACACCATCCAGGAAGACCCCAGCACAGACTCACATATGGACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp AAGGGGTCCTTCTCAAACCCATCCTCGTCCATATGTGAGTCTGTGCTGGGGTCTACAGACCCAACGATGTaGTCTGCTAAAAACTTTCCA +
Preference number: 5 (lower is better)
Translates to: KGSFSNPSSSICESVLGSTDPTM*SAKNFP
Trigger: TGGAAAGTTTTTAGCAGACAACATCGTTGGGTCTGT...AGACCCCAGCACAGACTCACATATGGACGAGGATGGGTTTGAGAAGGACCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp CCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAAGGGCGCAGGAAAGGGTTaGATAATGCGAACCGATGCA +
Preference number: 5 (lower is better)
Translates to: PFQKEKGQTTQELFTCRKGAGKG*IMRTDA
Trigger: TGCATCGGTTCGCATTATCAAACCCTTTCCTGCGCC...CTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp CCTTACACTTGCCAAGATCCAAGCAAACAGTGTCATCTTCAGCATTTCCTGGAGCAGCTGTGCTGCTATTaGGGAAGGGGTCCTTCTCAA +
Preference number: 5 (lower is better)
Translates to: PYTCQDPSKQCHLQHFLEQLCCY*GRGPSQ
Trigger: TTGAGAAGGACCCCTTCCCAAATAGCAGCACAGCTG...CTCCAGGAAATGCTGAAGATGACACTGTTTGCTTGGATCTTGGCAAGTGTAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp CCCTGGTCCTCATTCGGGGCACATTCTGCTAGACCATCCGGATCATGTTCTGCTCTGTATTTTCTGCTTTaGCACCACAGGTCAAAAGAT +
Preference number: 5 (lower is better)
Translates to: PWSSFGAHSARPSGSCSALYFLL*HHRSKD
Trigger: ATCTTTTGACCTGTGGTGCAAAAGCAGAAAATACAG...AGCAGAACATGATCCGGATGGTCTAGCAGAATGTGCCCCGAATGAGGACCAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp CTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAAGTCTGAAGTATCAAGTCTaGTGGGGACAGCCCCCAACC +
Preference number: 5 (lower is better)
Translates to: LFKRRRAKPHKNCLPAGSLKYQV*WGQPPT
Trigger: GGTTGGGGGCTGTCCCCACAAGACTTGATACTTCAG...ACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000310823.8
CDS-3UTR CAA 90 bp TTTGTTCAGCATCGACATAGGGCACACAGCGGCCAGAAAGGTCCCTGCAGCACACATCCTTTTCTTCATTaGGGTAACTTTTTGCCATGT +
Preference number: 5 (lower is better)
Translates to: FVQHRHRAHSGQKGPCSTHPFLH*GNFLPC
Trigger: ACATGGCAAAAAGTTACCCAAATGAAGAAAAGGATG...TGTGCTGCAGGGACCTTTCTGGCCGCTGTGTGCCCTATGTCGATGCTGAACAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp CACAGGACTCCAGCTGCTGTTCCCTCTCGCAGAAAGGGATGCATTTCCCATCCTCATCCTTTTCTTCATTaGGGTAACTTTTTGCCATGT +
Preference number: 5 (lower is better)
Translates to: HRTPAAVPSRRKGCISHPHPFLH*GNFLPC
Trigger: ACATGGCAAAAAGTTACCCAAATGAAGAAAAGGATG...AGGATGGGAAATGCATCCCTTTCTGCGAGAGGGAACAGCAGCTGGAGTCCTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp GATCCAAGCAAACAGTGTCATCTTCAGCATTTCCTGGAGGCGGGCACTCACTGCTCCCATATCAAAATCTaGGTATGTGAAAAGGTGTGC +
Preference number: 5 (lower is better)
Translates to: DPSKQCHLQHFLEAGTHCSHIKI*VCEKVC
Trigger: GCACACCTTTTCACATACCAAGATTTTGATATGGGA...GCAGTGAGTGCCCGCCTCCAGGAAATGCTGAAGATGACACTGTTTGCTTGGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp ACAGGACTCCAGCTGCTGTTCCCTCTCGCAGAAAGGGATGCATTTCCCATCCTTTCCCATATCAAAATCTaGGTATGTGAAAAGGTGTGC +
Preference number: 5 (lower is better)
Translates to: TGLQLLFPLAERDAFPILSHIKI*VCEKVC
Trigger: GCACACCTTTTCACATACCAAGATTTTGATATGGGA...AAGGATGGGAAATGCATCCCTTTCTGCGAGAGGGAACAGCAGCTGGAGTCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp CCTGGCACTTCTTCTGGGCAGTCTCAAACTGACAGTTTTTACAGCAAGGACTGTGGCTATAATAAGCCTTaGGACAAACACCTCCATGGC +
Preference number: 5 (lower is better)
Translates to: PGTSSGQSQTDSFYSKDCGYNKP*DKHLHG
Trigger: GCCATGGAGGTGTTTGTCCAAAGGCTTATTATAGCC...ACAGTCCTTGCTGTAAAAACTGTCAGTTTGAGACTGCCCAGAAGAAGTGCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp GCAGGTAGTATTCTATCTCCTGGCTGGCTCATCACATTCAAAACAACCTGTTTTAACGTGCAGTCGCTGTaGCAGCAGGTGTCGTTGTTC +
Preference number: 5 (lower is better)
Translates to: AGSILSPGWLITFKTTCFNVQSL*QQVSLF
Trigger: GAACAACGACACCTGCTGCAACAGCGACTGCACGTT...AAAACAGGTTGTTTTGAATGTGATGAGCCAGCCAGGAGATAGAATACTACCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310823.8
CDS-3UTR CAA 90 bp GCTATTACCTGTGCAGTAGGACACGCCTTTGCAAGTAGCATTAATCGCCTCCTGCACACCTTGCAGGAGTaGTCAGTTTCATTACATGCA +
Preference number: 5 (lower is better)
Translates to: AITCAVGHAFASSINRLLHTLQE*SVSLHA
Trigger: TGCATGTAATGAAACTGACAACTCCTGCAAGGTGTG...CAGGAGGCGATTAATGCTACTTGCAAAGGCGTGTCCTACTGCACAGGTAATAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp CCAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAACACATGACCAGCATTCCCTGCAGCACACCTaGCAGGAGTTGTCAGTTTCA +
Preference number: 5 (lower is better)
Translates to: PNHTRTVYLQEVQTHDQHSLQHT*QELSVS
Trigger: TGAAACTGACAACTCCTGCAAGGTGTGCTGCAGGGA...ATGCTGGTCATGTGTTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp TGCACTTCAGGTGGTTCTCTGTCTACTAACCCTTTTGGGAGCAACTCTTCATTATCCCTGCAGCACACCTaGCAGGAGTTGTCAGTTTCA +
Preference number: 5 (lower is better)
Translates to: CTSGGSLSTNPFGSNSSLSLQHT*QELSVS
Trigger: TGAAACTGACAACTCCTGCAAGGTGTGCTGCAGGGA...TAATGAAGAGTTGCTCCCAAAAGGGTTAGTAGACAGAGAACCACCTGAAGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647610.1
ENST00000650116.1
CDS-3UTR CAA 90 bp TTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGGGCGCAGGAAAGGGTTaGATAATGCGAACCGATGCA +
Preference number: 5 (lower is better)
Translates to: LPFQKEKGQTTQELFTCRGAGKG*IMRTDA
Trigger: TGCATCGGTTCGCATTATCAAACCCTTTCCTGCGCC...CCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp TGCACACTTAAGTCAGAAGAGCTGAGAACTAAATTAGCACTCTGTTTCTTTGCTTCTGGTGGTCCAGTTTaGGAGCTGCTGGCGCCGAAG +
Preference number: 5 (lower is better)
Translates to: CTLKSEELRTKLALCFFASGGPV*ELLAPK
Trigger: CTTCGGCGCCAGCAGCTCCAAAACTGGACCACCAGA...AGCAAAGAAACAGAGTGCTAATTTAGTTCTCAGCTCTTCTGACTTAAGTGTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp CAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAACAGCTGTGCTGCTATTaGGGAAGGGGTCCTTCTCAA +
Preference number: 5 (lower is better)
Translates to: QKEKGQTTQELFTCRKFKQLCCY*GRGPSQ
Trigger: TTGAGAAGGACCCCTTCCCAAATAGCAGCACAGCTG...TTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp GCACATTCTGCTAGACCATCCGGATCATGTTCTGCTCCAAAATTATGTCCCAATCAGCTGTGCTGCTATTaGGGAAGGGGTCCTTCTCAA +
Preference number: 5 (lower is better)
Translates to: AHSARPSGSCSAPKLCPNQLCCY*GRGPSQ
Trigger: TTGAGAAGGACCCCTTCCCAAATAGCAGCACAGCTG...ATTGGGACATAATTTTGGAGCAGAACATGATCCGGATGGTCTAGCAGAATGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS GCA 90 bp AGTGAAATGCTCTTAGGATATTACCATTGTGTCAAATGCCAGAGCTaGTGGCTAGACATACTACCGAGAGCAGAATGTCTGTGCTGCCTG +
Preference number: 5 (lower is better)
Translates to: SEMLLGYYHCVKCQS*WLDILPRAECLCCL
Trigger: CAGGCAGCACAGACATTCTGCTCTCGGTAGTATGTCTAGCCAGCAGCTCTGGCATTTGACACAATGGTAATATCCTAAGAGCATTTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649798.1
CDS CCA 90 bp TTTATACTCATCATGCTAATAGGACAGCAGGGTAATTCCAAGCGTTaGCCAGAACGTCAGGATAAGGAGTCCTCAGACACAGGCAACCTA +
Preference number: 5 (lower is better)
Translates to: FILIMLIGQQGNSKR*PERQDKESSDTGNL
Trigger: TAGGTTGCCTGTGTCTGAGGACTCCTTATCCTGACGTTCTGGCCAACGCTTGGAATTACCCTGCTGTCCTATTAGCATGATGAGTATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647622.1
ENST00000649972.1
ENST00000650241.1
CDS-3UTR CAA 90 bp TCTCAAACCCATCCTCGTCCATATGTGAGTCTGTGCTGGGGTCTTCCTGGATGGCATTTGGGTAACTTTTaGCCATGTTGTAGTGCTTTT +
Preference number: 5 (lower is better)
Translates to: SQTHPRPYVSLCWGLPGWHLGNF*PCCSAF
Trigger: AAAAGCACTACAACATGGCAAAAAGTTACCCAAATG...CCATCCAGGAAGACCCCAGCACAGACTCACATATGGACGAGGATGGGTTTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp AATAAGCCTTTGGACAAACACCTCCATGGCTGTTTGCTCTGGGAGAGCCAACATTTTATTGCTGCGTTCTaGAAAACACTCCTGGGCCTT +
Preference number: 5 (lower is better)
Translates to: NKPLDKHLHGCLLWESQHFIAAF*KTLLGL
Trigger: AAGGCCCAGGAGTGTTTTCAAGAACGCAGCAATAAA...ATGTTGGCTCTCCCAGAGCAAACAGCCATGGAGGTGTTTGTCCAAAGGCTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp AAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAACACATGACCTTGCAGCAGGTGTCGTaGTTCAGATACATGATGCCA +
Preference number: 5 (lower is better)
Translates to: KGQTTQELFTCRKFKHMTLQQVS*FRYMMP
Trigger: TGGCATCATGTATCTGAACAACGACACCTGCTGCAA...GGTCATGTGTTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp CCTTACACTTGCCAAGATCCAAGCAAACAGTGTCATCTTCAGCATTTCCTGGAGTTGCAGCAGGTGTCGTaGTTCAGATACATGATGCCA +
Preference number: 5 (lower is better)
Translates to: PYTCQDPSKQCHLQHFLELQQVS*FRYMMP
Trigger: TGGCATCATGTATCTGAACAACGACACCTGCTGCAA...CTCCAGGAAATGCTGAAGATGACACTGTTTGCTTGGATCTTGGCAAGTGTAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp AGTTTGAAAACATCTTATTGTTCTCGTGATCGCCACTCACAGCTATGGGATACAAACGTGCAGTCGCTGTaGCAGCAGGTGTCGTTGTTC +
Preference number: 5 (lower is better)
Translates to: SLKTSYCSRDRHSQLWDTNVQSL*QQVSLF
Trigger: GAACAACGACACCTGCTGCAACAGCGACTGCACGTT...TGTATCCCATAGCTGTGAGTGGCGATCACGAGAACAATAAGATGTTTTCAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp GACCCAACGATGTTGTCTGCTAAAAACTTTCCAAAAGTATTGATGCTCAGCTGGGGCGCAGGAAAGGGTTaGATAATGCGAACCGATGCA +
Preference number: 5 (lower is better)
Translates to: DPTMLSAKNFPKVLMLSWGAGKG*IMRTDA
Trigger: TGCATCGGTTCGCATTATCAAACCCTTTCCTGCGCC...CCAGCTGAGCATCAATACTTTTGGAAAGTTTTTAGCAGACAACATCGTTGGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS TCA 90 bp GTAGCATTAATCGCCTCCTGGCACTTCTTCTGGGCAGTCTCAAACTaGCAGTTTTTACAGCAAGGACTGTTCCTGTCACTTATTGTTCTC +
Preference number: 5 (lower is better)
Translates to: VALIASWHFFWAVSN*QFLQQGLFLSLIVL
Trigger: GAGAACAATAAGTGACAGGAACAGTCCTTGCTGTAAAAACTGTCAGTTTGAGACTGCCCAGAAGAAGTGCCAGGAGGCGATTAATGCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647622.1
CDS CCA 90 bp GAAATGCTCTTAGGATATTACCATTGTGTCAAATGCCAGAGCTGCTaGCTAGACATACTACCGAGAGCAGAATGTCTGTGCTGCCTGTAT +
Preference number: 5 (lower is better)
Translates to: EMLLGYYHCVKCQSC*LDILPRAECLCCLY
Trigger: ATACAGGCAGCACAGACATTCTGCTCTCGGTAGTATGTCTAGCCAGCAGCTCTGGCATTTGACACAATGGTAATATCCTAAGAGCATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649798.1
CDS-3UTR CAA 90 bp GTTCCCTCTCGCAGAAAGGGATGCATTTCCCATCCTTACACTTGCCAAGATCCATGTCTACTAACCCTTTaGGGAGCAACTCTTCATTAT +
Preference number: 5 (lower is better)
Translates to: VPSRRKGCISHPYTCQDPCLLTL*GATLHY
Trigger: ATAATGAAGAGTTGCTCCCAAAAGGGTTAGTAGACA...TGGATCTTGGCAAGTGTAAGGATGGGAAATGCATCCCTTTCTGCGAGAGGGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp ACTGTTTACCTGCAGGAAGTTCAAACACATGACCAGCATCTGCTAAGTCACTTCACCTCTTGTGGAGACTaGAGAATGCGAATCTGCTCT +
Preference number: 5 (lower is better)
Translates to: TVYLQEVQTHDQHLLSHFTSCGD*RMRICS
Trigger: AGAGCAGATTCGCATTCTCAAGTCTCCACAAGAGGT...GAAGTGACTTAGCAGATGCTGGTCATGTGTTTGAACTTCCTGCAGGTAAACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310823.8
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp CAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAAACCAGGTTTTACCTCTaGTGGAGACTTGAGAATGCG +
Preference number: 5 (lower is better)
Translates to: QKEKGQTTQELFTCRKFKTRFYL*WRLENA
Trigger: CGCATTCTCAAGTCTCCACAAGAGGTAAAACCTGGT...TTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp CAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAACACATGACCAGCATCACCAGGTTTTACCTCTaGTGGAGACTTGAGAATGCG +
Preference number: 5 (lower is better)
Translates to: QTTQELFTCRKFKHMTSITRFYL*WRLENA
Trigger: CGCATTCTCAAGTCTCCACAAGAGGTAAAACCTGGT...GATGCTGGTCATGTGTTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp ATTACCTGTGCAGTAGGACACGCCTTTGCAAGTAGCATTAATCGCCTCCTGGCATCCCATATCAAAATCTaGGTATGTGAAAAGGTGTGC +
Preference number: 5 (lower is better)
Translates to: ITCAVGHAFASSINRLLASHIKI*VCEKVC
Trigger: GCACACCTTTTCACATACCAAGATTTTGATATGGGA...TGCCAGGAGGCGATTAATGCTACTTGCAAAGGCGTGTCCTACTGCACAGGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp ATTGTTCTCGTGATCGCCACTCACAGCTATGGGATACATGACATATTTCCCTCCTTTATTGCTGCGTTCTaGAAAACACTCCTGGGCCTT +
Preference number: 5 (lower is better)
Translates to: IVLVIATHSYGIHDIFPSFIAAF*KTLLGL
Trigger: AAGGCCCAGGAGTGTTTTCAAGAACGCAGCAATAAA...GGAGGGAAATATGTCATGTATCCCATAGCTGTGAGTGGCGATCACGAGAACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp ATTGTTCTCGTGATCGCCACTCACAGCTATGGGATACATGACATATTTCCCTCCTTCCCATCCTTACACTaGCCAAGATCCAAGCAAACA +
Preference number: 5 (lower is better)
Translates to: IVLVIATHSYGIHDIFPSFPSLH*PRSKQT
Trigger: TGTTTGCTTGGATCTTGGCAAGTGTAAGGATGGGAA...GGAGGGAAATATGTCATGTATCCCATAGCTGTGAGTGGCGATCACGAGAACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp CCTTACACTTGCCAAGATCCAAGCAAACAGTGTCATCTTCAGCATTTCCTGGAGTTCCCATCCTTACACTaGCCAAGATCCAAGCAAACA +
Preference number: 5 (lower is better)
Translates to: PYTCQDPSKQCHLQHFLEFPSLH*PRSKQT
Trigger: TGTTTGCTTGGATCTTGGCAAGTGTAAGGATGGGAA...CTCCAGGAAATGCTGAAGATGACACTGTTTGCTTGGATCTTGGCAAGTGTAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp AGTTTGAAAACATCTTATTGTTCTCGTGATCGCCACTCACAGCTATGGGATACATCCCTGCAGCACACCTaGCAGGAGTTGTCAGTTTCA +
Preference number: 5 (lower is better)
Translates to: SLKTSYCSRDRHSQLWDTSLQHT*QELSVS
Trigger: TGAAACTGACAACTCCTGCAAGGTGTGCTGCAGGGA...TGTATCCCATAGCTGTGAGTGGCGATCACGAGAACAATAAGATGTTTTCAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp TATGGGATACATGACATATTTCCCTCCCTGGTCCTCATTCGGGGCACATTCTGCAACTTTCCAAAAGTATaGATGCTCAGCTGGTCAATG +
Preference number: 5 (lower is better)
Translates to: YGIHDIFPSLVLIRGTFCNFPKV*MLSWSM
Trigger: CATTGACCAGCTGAGCATCAATACTTTTGGAAAGTT...GCAGAATGTGCCCCGAATGAGGACCAGGGAGGGAAATATGTCATGTATCCCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp GTCAATGAAATCCCAAAATCGTTCAATTACATCCTGTACTCGTTTCTCACATTTTCTGGTGGTCCAGTTTaGGAGCTGCTGGCGCCGAAG +
Preference number: 5 (lower is better)
Translates to: VNEIPKSFNYILYSFLTFSGGPV*ELLAPK
Trigger: CTTCGGCGCCAGCAGCTCCAAAACTGGACCACCAGA...AAATGTGAGAAACGAGTACAGGATGTAATTGAACGATTTTGGGATTTCATTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp GCAGGTAGTATTCTATCTCCTGGCTGGCTCATCACATTCAAAACAACCTGTTTTGGCTATAATAAGCCTTaGGACAAACACCTCCATGGC +
Preference number: 5 (lower is better)
Translates to: AGSILSPGWLITFKTTCFGYNKP*DKHLHG
Trigger: GCCATGGAGGTGTTTGTCCAAAGGCTTATTATAGCC...AAAACAGGTTGTTTTGAATGTGATGAGCCAGCCAGGAGATAGAATACTACCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310823.8
CDS-3UTR CAA 90 bp TCACCTTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGGCTATAATAAGCCTTaGGACAAACACCTCCATGGC +
Preference number: 5 (lower is better)
Translates to: SPYLFKRRRAKPHKNCLPGYNKP*DKHLHG
Trigger: GCCATGGAGGTGTTTGTCCAAAGGCTTATTATAGCC...AGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAAGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp CAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAATTTATTGCTGCGTTCTaGAAAACACTCCTGGGCCTT +
Preference number: 5 (lower is better)
Translates to: QKEKGQTTQELFTCRKFKFIAAF*KTLLGL
Trigger: AAGGCCCAGGAGTGTTTTCAAGAACGCAGCAATAAA...TTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp TTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGTTTATTGCTGCGTTCTaGAAAACACTCCTGGGCCTT +
Preference number: 5 (lower is better)
Translates to: LPFQKEKGQTTQELFTCRFIAAF*KTLLGL
Trigger: AAGGCCCAGGAGTGTTTTCAAGAACGCAGCAATAAA...CCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp TTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGTTCCCATCCTTACACTaGCCAAGATCCAAGCAAACA +
Preference number: 5 (lower is better)
Translates to: LPFQKEKGQTTQELFTCRFPSLH*PRSKQT
Trigger: TGTTTGCTTGGATCTTGGCAAGTGTAAGGATGGGAA...CCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp GCTGTCAACACGATTCTGACGCTGCAGTTTAAAGGAGGCAGCCTTTTCACTTCTCTGTATTTTCTGCTTTaGCACCACAGGTCAAAAGAT +
Preference number: 5 (lower is better)
Translates to: AVNTILTLQFKGGSLFTSLYFLL*HHRSKD
Trigger: ATCTTTTGACCTGTGGTGCAAAAGCAGAAAATACAG...AGAAGTGAAAAGGCTGCCTCCTTTAAACTGCAGCGTCAGAATCGTGTTGACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp TTGACAATAAACAGGCTGCAGAGACTTACTTTTCACTGGCTTTTGTACTGTGTAGTGGACTCTGCAGTTTaGATGGTGGCTGGTCAAGGT +
Preference number: 5 (lower is better)
Translates to: LTINRLQRLTFHWLLYCVVDSAV*MVAGQG
Trigger: ACCTTGACCAGCCACCATCAAAACTGCAGAGTCCAC...TACACAGTACAAAAGCCAGTGAAAAGTAAGTCTCTGCAGCCTGTTTATTGTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618923.2
CDS-3UTR CAA 90 bp GCTATTACCTGTGCAGTAGGACACGCCTTTGCAAGTAGCATTAATCGCCTCCTGAGCTCTAATATGAATTaGTATGCACTTCAGGTGGTT +
Preference number: 5 (lower is better)
Translates to: AITCAVGHAFASSINRLLSSNMN*YALQVV
Trigger: AACCACCTGAAGTGCATACAAATTCATATTAGAGCT...CAGGAGGCGATTAATGCTACTTGCAAAGGCGTGTCCTACTGCACAGGTAATAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647610.1
ENST00000650116.1
CDS-3UTR CAA 90 bp CACCTTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGTCGGCCCCATCTGTGTaGATTCTGATTATAACATCA +
Preference number: 5 (lower is better)
Translates to: HLTFSKGEGPNHTRTVYLSAPSV*ILIITS
Trigger: TGATGTTATAATCAGAATCAACACAGATGGGGCCGA...CAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310823.8
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp AACTACTTAGAAGCCCACCATGATACACATCTAAACCACACCCTCCAATCCATCTCGGCCCCATCTGTGTaGATTCTGATTATAACATCA +
Preference number: 5 (lower is better)
Translates to: NYLEAHHDTHLNHTLQSISAPSV*ILIITS
Trigger: TGATGTTATAATCAGAATCAACACAGATGGGGCCGA...GATGGATTGGAGGGTGTGGTTTAGATGTGTATCATGGTGGGCTTCTAAGTAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618923.2
CDS-3UTR CAA 90 bp CCTTACACTTGCCAAGATCCAAGCAAACAGTGTCATCTTCAGCATTTCCTGGAGTGTCTACTAACCCTTTaGGGAGCAACTCTTCATTAT +
Preference number: 5 (lower is better)
Translates to: PYTCQDPSKQCHLQHFLECLLTL*GATLHY
Trigger: ATAATGAAGAGTTGCTCCCAAAAGGGTTAGTAGACA...CTCCAGGAAATGCTGAAGATGACACTGTTTGCTTGGATCTTGGCAAGTGTAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp GCTGTCAACACGATTCTGACGCTGCAGTTTAAAGGAGGCAGCCTTTTCACTTCTCATTTGGGTAACTTTTaGCCATGTTGTAGTGCTTTT +
Preference number: 5 (lower is better)
Translates to: AVNTILTLQFKGGSLFTSHLGNF*PCCSAF
Trigger: AAAAGCACTACAACATGGCAAAAAGTTACCCAAATG...AGAAGTGAAAAGGCTGCCTCCTTTAAACTGCAGCGTCAGAATCGTGTTGACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp TGGGTCAGCTCTTCTTTTCACTCGATGAACAAGCTCTTCAGGTGGTTCTCTGTCCATCCTTTTCTTCATTaGGGTAACTTTTTGCCATGT +
Preference number: 5 (lower is better)
Translates to: WVSSSFHSMNKLFRWFSVHPFLH*GNFLPC
Trigger: ACATGGCAAAAAGTTACCCAAATGAAGAAAAGGATG...GACAGAGAACCACCTGAAGAGCTTGTTCATCGAGTGAAAAGAAGAGCTGACCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000647979.1
ENST00000649227.1
CDS-3UTR CAA 90 bp TCACCTTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTCACACCTTGCAGGAGTaGTCAGTTTCATTACATGCA +
Preference number: 5 (lower is better)
Translates to: SPYLFKRRRAKPHKNCLPHTLQE*SVSLHA
Trigger: TGCATGTAATGAAACTGACAACTCCTGCAAGGTGTG...AGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAAGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp CCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAAGCTGTATTTTCTGCTTTaGCACCACAGGTCAAAAGAT +
Preference number: 5 (lower is better)
Translates to: PFQKEKGQTTQELFTCRKLYFLL*HHRSKD
Trigger: ATCTTTTGACCTGTGGTGCAAAAGCAGAAAATACAG...CTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp ACTGTTTACCTGCAGGAAGTTCAAACACATGACCAGCATCTGCTAAGTCACTTCCAGGGCCCTAAACAGTaGGTAGATTCCATAAATTCA +
Preference number: 5 (lower is better)
Translates to: TVYLQEVQTHDQHLLSHFQGPKQ*VDSINS
Trigger: TGAATTTATGGAATCTACCAACTGTTTAGGGCCCTG...GAAGTGACTTAGCAGATGCTGGTCATGTGTTTGAACTTCCTGCAGGTAAACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310823.8
ENST00000649227.1
CDS-3UTR CAA 90 bp CTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAAGTACACCCCACTCAACCTaGTATCAAATTCCAAAAGTG +
Preference number: 5 (lower is better)
Translates to: LFKRRRAKPHKNCLPAGSTPHST*YQIPKV
Trigger: CACTTTTGGAATTTGATACAAGGTTGAGTGGGGTGT...ACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000310823.8
CDS-3UTR CAA 90 bp TTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGTGTCTACTAACCCTTTaGGGAGCAACTCTTCATTAT +
Preference number: 5 (lower is better)
Translates to: LPFQKEKGQTTQELFTCRCLLTL*GATLHY
Trigger: ATAATGAAGAGTTGCTCCCAAAAGGGTTAGTAGACA...CCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp GCACATTCTGCTAGACCATCCGGATCATGTTCTGCTCCAAAATTATGTCCCAATTGTCTACTAACCCTTTaGGGAGCAACTCTTCATTAT +
Preference number: 5 (lower is better)
Translates to: AHSARPSGSCSAPKLCPNCLLTL*GATLHY
Trigger: ATAATGAAGAGTTGCTCCCAAAAGGGTTAGTAGACA...ATTGGGACATAATTTTGGAGCAGAACATGATCCGGATGGTCTAGCAGAATGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp ACACTTAAGTCAGAAGAGCTGAGAACTAAATTAGCACTCTGTTTCTTTGCTGTCACCAGGTTTTACCTCTaGTGGAGACTTGAGAATGCG +
Preference number: 5 (lower is better)
Translates to: TLKSEELRTKLALCFFAVTRFYL*WRLENA
Trigger: CGCATTCTCAAGTCTCCACAAGAGGTAAAACCTGGT...GACAGCAAAGAAACAGAGTGCTAATTTAGTTCTCAGCTCTTCTGACTTAAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp ACTGTTTACCTGCAGGAAGTTCAAACACATGACCAGCATCTGCTAAGTCACTTCTCCCATATCAAAATCTaGGTATGTGAAAAGGTGTGC +
Preference number: 5 (lower is better)
Translates to: TVYLQEVQTHDQHLLSHFSHIKI*VCEKVC
Trigger: GCACACCTTTTCACATACCAAGATTTTGATATGGGA...GAAGTGACTTAGCAGATGCTGGTCATGTGTTTGAACTTCCTGCAGGTAAACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp GAAGAGCTGAGAACTAAATTAGCACTCTGTTTCTTTGCTGTCAACACGATTCTGTTTATTGCTGCGTTCTaGAAAACACTCCTGGGCCTT +
Preference number: 5 (lower is better)
Translates to: EELRTKLALCFFAVNTILFIAAF*KTLLGL
Trigger: AAGGCCCAGGAGTGTTTTCAAGAACGCAGCAATAAA...CAGAATCGTGTTGACAGCAAAGAAACAGAGTGCTAATTTAGTTCTCAGCTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp CAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAACACATGACCAGCATCAACTTTCCAAAAGTATaGATGCTCAGCTGGTCAATG +
Preference number: 5 (lower is better)
Translates to: QTTQELFTCRKFKHMTSINFPKV*MLSWSM
Trigger: CATTGACCAGCTGAGCATCAATACTTTTGGAAAGTT...GATGCTGGTCATGTGTTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp GCAGGTAGTATTCTATCTCCTGGCTGGCTCATCACATTCAAAACAACCTGTTTTACAGACCCAACGATGTaGTCTGCTAAAAACTTTCCA +
Preference number: 5 (lower is better)
Translates to: AGSILSPGWLITFKTTCFTDPTM*SAKNFP
Trigger: TGGAAAGTTTTTAGCAGACAACATCGTTGGGTCTGT...AAAACAGGTTGTTTTGAATGTGATGAGCCAGCCAGGAGATAGAATACTACCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310823.8
CDS-3UTR CAA 90 bp ACCTTACCTTTTCAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCCATTTGGGTAACTTTTaGCCATGTTGTAGTGCTTTT +
Preference number: 5 (lower is better)
Translates to: TLPFQKEKGQTTQELFTCHLGNF*PCCSAF
Trigger: AAAAGCACTACAACATGGCAAAAAGTTACCCAAATG...GCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTGAAAAGGTAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp CAAAAGGAGAAGGGCCAAACCACACAAGAACTGTTTACCTGCAGGAAGTTCAAACATCCTTTTCTTCATTaGGGTAACTTTTTGCCATGT +
Preference number: 5 (lower is better)
Translates to: QKEKGQTTQELFTCRKFKHPFLH*GNFLPC
Trigger: ACATGGCAAAAAGTTACCCAAATGAAGAAAAGGATG...TTTGAACTTCCTGCAGGTAAACAGTTCTTGTGTGGTTTGGCCCTTCTCCTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000310823.8
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp CCAATAATTTACACGTGTTCTTCATGGGATCTGGGTCAGCTCTTCTTTTCACTCTCCCATATCAAAATCTaGGTATGTGAAAAGGTGTGC +
Preference number: 5 (lower is better)
Translates to: PIIYTCSSWDLGQLFFSLSHIKI*VCEKVC
Trigger: GCACACCTTTTCACATACCAAGATTTTGATATGGGA...GAGTGAAAAGAAGAGCTGACCCAGATCCCATGAAGAACACGTGTAAATTATTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp GTCTTTGGGGAAAGGAACTGGTTTGACAATAAACAGGCTGCAGAGACTTACTTTACTTTTCACTGGCTTTaGTACTGTGTACATGTTACC +
Preference number: 5 (lower is better)
Translates to: VFGERNWFDNKQAAETYFTFHWL*YCVHVT
Trigger: GGTAACATGTACACAGTACAAAAGCCAGTGAAAAGT...AAAGTAAGTCTCTGCAGCCTGTTTATTGTCAAACCAGTTCCTTTCCCCAAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618923.2
CDS-3UTR CAA 90 bp GCAGGTAGTATTCTATCTCCTGGCTGGCTCATCACATTCAAAACAACCTGTTTTGTGTTTCTACATGTGTaGAAGTCTGTAGATCTCTTT +
Preference number: 5 (lower is better)
Translates to: AGSILSPGWLITFKTTCFVFLHV*KSVDLF
Trigger: AAAGAGATCTACAGACTTCAACACATGTAGAAACAC...AAAACAGGTTGTTTTGAATGTGATGAGCCAGCCAGGAGATAGAATACTACCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310823.8
CDS-3UTR CAA 90 bp GCTCCCATTAGTAAGTGTGAGATAAAGAAGGAAACCATGCTCAGCTCAGAGTTTGTGTTTCTACATGTGTaGAAGTCTGTAGATCTCTTT +
Preference number: 5 (lower is better)
Translates to: APISKCEIKKETMLSSEFVFLHV*KSVDLF
Trigger: AAAGAGATCTACAGACTTCAACACATGTAGAAACAC...AAACTCTGAGCTGAGCATGGTTTCCTTCTTTATCTCACACTTACTAATGGGAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618923.2
CDS-3UTR CAA 90 bp TGCTGCGTTCTTGAAAACACTCCTGGGCCTTACTTTCAATGGTCTTATAGATTGGTGTTTCTACATGTGTaGAAGTCTGTAGATCTCTTT +
Preference number: 5 (lower is better)
Translates to: CCVLENTPGPYFQWSYRLVFLHV*KSVDLF
Trigger: AAAGAGATCTACAGACTTCAACACATGTAGAAACAC...CAATCTATAAGACCATTGAAAGTAAGGCCCAGGAGTGTTTTCAAGAACGCAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649227.1
CDS-3UTR CAA 90 bp AAACAGGCTGCAGAGACTTACTTTTCACTGGCTTTTGTACTGTGTACATGTTACTGTCTACTAACCCTTTaGGGAGCAACTCTTCATTAT +
Preference number: 5 (lower is better)
Translates to: KQAAETYFSLAFVLCTCYCLLTL*GATLHY
Trigger: ATAATGAAGAGTTGCTCCCAAAAGGGTTAGTAGACA...GTAACATGTACACAGTACAAAAGCCAGTGAAAAGTAAGTCTCTGCAGCCTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618923.2
CDS-3UTR CAA 90 bp GTCAATGAAATCCCAAAATCGTTCAATTACATCCTGTACTCGTTTCTCACATTTACCAGGTTTTACCTCTaGTGGAGACTTGAGAATGCG +
Preference number: 5 (lower is better)
Translates to: VNEIPKSFNYILYSFLTFTRFYL*WRLENA
Trigger: CGCATTCTCAAGTCTCCACAAGAGGTAAAACCTGGT...AAATGTGAGAAACGAGTACAGGATGTAATTGAACGATTTTGGGATTTCATTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp CTGAGAACTAAATTAGCACTCTGTTTCTTTGCTGTCAACACGATTCTGACGCTGCATTTGGGTAACTTTTaGCCATGTTGTAGTGCTTTT +
Preference number: 5 (lower is better)
Translates to: LRTKLALCFFAVNTILTLHLGNF*PCCSAF
Trigger: AAAAGCACTACAACATGGCAAAAAGTTACCCAAATG...CAGCGTCAGAATCGTGTTGACAGCAAAGAAACAGAGTGCTAATTTAGTTCTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp TGCACACTTAAGTCAGAAGAGCTGAGAACTAAATTAGCACTCTGTTTCTTTGCTACAGACCCAACGATGTaGTCTGCTAAAAACTTTCCA +
Preference number: 5 (lower is better)
Translates to: CTLKSEELRTKLALCFFATDPTM*SAKNFP
Trigger: TGGAAAGTTTTTAGCAGACAACATCGTTGGGTCTGT...AGCAAAGAAACAGAGTGCTAATTTAGTTCTCAGCTCTTCTGACTTAAGTGTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp TCTTTGGTATCATTAACAAATCTCCAAAGTGGCTCTATGTTATATTCGGCCCCAACAGACCCAACGATGTaGTCTGCTAAAAACTTTCCA +
Preference number: 5 (lower is better)
Translates to: SLVSLTNLQSGSMLYSAPTDPTM*SAKNFP
Trigger: TGGAAAGTTTTTAGCAGACAACATCGTTGGGTCTGT...TGGGGCCGAATATAACATAGAGCCACTTTGGAGATTTGTTAATGATACCAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp TGCCATGTTGTAGTGCTTTTCACCAGGTTTTACCTCTTGTGGAGACTTGAGAATAGCTCTAATATGAATTaGTATGCACTTCAGGTGGTT +
Preference number: 5 (lower is better)
Translates to: CHVVVLFTRFYLLWRLENSSNMN*YALQVV
Trigger: AACCACCTGAAGTGCATACAAATTCATATTAGAGCT...ATTCTCAAGTCTCCACAAGAGGTAAAACCTGGTGAAAAGCACTACAACATGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647610.1
ENST00000650116.1
CDS-3UTR CAA 90 bp GTCAATGAAATCCCAAAATCGTTCAATTACATCCTGTACTCGTTTCTCACATTTCACACCTTGCAGGAGTaGTCAGTTTCATTACATGCA +
Preference number: 5 (lower is better)
Translates to: VNEIPKSFNYILYSFLTFHTLQE*SVSLHA
Trigger: TGCATGTAATGAAACTGACAACTCCTGCAAGGTGTG...AAATGTGAGAAACGAGTACAGGATGTAATTGAACGATTTTGGGATTTCATTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp CCTGGGCCTTACTTTCAATGGTCTTATAGATTGATTGTTTACTGCAGTTTGAAACAGGGCCCTAAACAGTaGGTAGATTCCATAAATTCA +
Preference number: 5 (lower is better)
Translates to: PGPYFQWSYRLIVYCSLKQGPKQ*VDSINS
Trigger: TGAATTTATGGAATCTACCAACTGTTTAGGGCCCTG...TTTCAAACTGCAGTAAACAATCAATCTATAAGACCATTGAAAGTAAGGCCCAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649227.1
CDS TCA 90 bp CCATGTTGTAGTGCTTTTCACCAGGTTTTACCTCTTGTGGAGACTTaGGAATGCGAATCTATACTTAAAGAGATCATATACTTAGAACAC +
Preference number: 5 (lower is better)
Translates to: PCCSAFHQVLPLVET*ECESILKEIIYLEH
Trigger: GTGTTCTAAGTATATGATCTCTTTAAGTATAGATTCGCATTCTCAAGTCTCCACAAGAGGTAAAACCTGGTGAAAAGCACTACAACATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647622.1
ENST00000649972.1
CDS-3UTR CAA 90 bp TGCACACTTAAGTCAGAAGAGCTGAGAACTAAATTAGCACTCTGTTTCTTTGCTCATTTGGGTAACTTTTaGCCATGTTGTAGTGCTTTT +
Preference number: 5 (lower is better)
Translates to: CTLKSEELRTKLALCFFAHLGNF*PCCSAF
Trigger: AAAAGCACTACAACATGGCAAAAAGTTACCCAAATG...AGCAAAGAAACAGAGTGCTAATTTAGTTCTCAGCTCTTCTGACTTAAGTGTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS-3UTR CAA 90 bp CCTGGGCCTTACTTTCAATGGTCTTATAGATTGATTGTTTACTGCAGTTTGAAAAACTTTCCAAAAGTATaGATGCTCAGCTGGTCAATG +
Preference number: 5 (lower is better)
Translates to: PGPYFQWSYRLIVYCSLKNFPKV*MLSWSM
Trigger: CATTGACCAGCTGAGCATCAATACTTTTGGAAAGTT...TTTCAAACTGCAGTAAACAATCAATCTATAAGACCATTGAAAGTAAGGCCCAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS TCA 90 bp TTCCAAACAGTTAATGTCTTGACCAAGTACTTCACAAATCTAAAGTaGAATGCTCTTAGGATATTACCATTGTGTCAAATGCCAGAGCTG +
Preference number: 5 (lower is better)
Translates to: FQTVNVLTKYFTNLK*NALRILPLCQMPEL
Trigger: CAGCTCTGGCATTTGACACAATGGTAATATCCTAAGAGCATTTCACTTTAGATTTGTGAAGTACTTGGTCAAGACATTAACTGTTTGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649798.1
CDS-3UTR CAA 90 bp TTCCTTTGTAAGGATGGTTTTACCATAATTCTTTGTGCTCGTCAAACCACTATTCTGTATTTTCTGCTTTaGCACCACAGGTCAAAAGAT +
Preference number: 5 (lower is better)
Translates to: FLCKDGFTIILCARQTTILYFLL*HHRSKD
Trigger: ATCTTTTGACCTGTGGTGCAAAAGCAGAAAATACAG...AATAGTGGTTTGACGAGCACAAAGAATTATGGTAAAACCATCCTTACAAAGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000647610.1
ENST00000647979.1
ENST00000649227.1
ENST00000650116.1
CDS CCA 72 bp ACAGCAGAATGGTGGTTACCAGAGGCGAGTCTCTGGTaGGGGCCGAAGCCCGGGTCATCCGGAGGTCGCGGC +
Preference number: 6 (lower is better)
Translates to: TAEWWLPEASLW*GPKPGSSGGRG
Trigger: GCCGCGACCTCCGGATGACCCGGGCTTCGGCCCCCACCAGAGACTCGCCTCTGGTAACCACCATTCTGCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649972.1
CDS GCA 72 bp GGAAGATTCTACCGCCAGGCTCGACGCCCCCAGAAGTaGAGGTGGCGTTACCAAAGGCCGGCTCAGCCAGCT +
Preference number: 6 (lower is better)
Translates to: GRFYRQARRPQK*RWRYQRPAQPA
Trigger: AGCTGGCTGAGCCGGCCTTTGGTAACGCCACCTGCACTTCTGGGGGCGTCGAGCCTGGCGGTAGAATCTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310823.8
CDS CCA 72 bp CCGGAGGTCGCGGCGCCAGCACGAAAGGAACCACGCTaGTCAGGAATAGGAGAGACTGCCTCATGTTCCCGG +
Preference number: 6 (lower is better)
Translates to: PEVAAPARKEPR*SGIGETASCSR
Trigger: CCGGGAACATGAGGCAGTCTCTCCTATTCCTGACCAGCGTGGTTCCTTTCGTGCTGGCGCCGCGACCTCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000310823.8
ENST00000478059.1
ENST00000618923.2
ENST00000647610.1
ENST00000647622.1
ENST00000647979.1
ENST00000649227.1
ENST00000649972.1
ENST00000650116.1
CDS GCA 72 bp GCTGCTGGACTGGGAATAAAACTGCTCACCATTACATaGACAGGACTCCAGCTGCTGTTCCCTCTCGCAGAA +
Preference number: 6 (lower is better)
Translates to: AAGLGIKLLTIT*TGLQLLFPLAE
Trigger: TTCTGCGAGAGGGAACAGCAGCTGGAGTCCTGTGCATGTAATGGTGAGCAGTTTTATTCCCAGTCCAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649068.1
CDS CCA 72 bp GATCTCACCACTGCTGTCATTCGCACAACCTCCAAATaGAGGAAGGGAGCCTGGCAGACAAAGGCCATGTTT +
Preference number: 6 (lower is better)
Translates to: DLTTAVIRTTSK*RKGAWQTKAMF
Trigger: AAACATGGCCTTTGTCTGCCAGGCTCCCTTCCTCCATTTGGAGGTTGTGCGAATGACAGCAGTGGTGAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649068.1
CDS TCA 72 bp GACACTCCTCAGTACCCAGAGAAACACACAGGTTCCTaGAGGGACGTAGGAGGATGTGATCTGTGTCCTATC +
Preference number: 6 (lower is better)
Translates to: DTPQYPEKHTGS*RDVGGCDLCPI
Trigger: GATAGGACACAGATCACATCCTCCTACGTCCCTTCAGGAACCTGTGTGTTTCTCTGGGTACTGAGGAGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647622.1
ENST00000649972.1
ENST00000650241.1
CDS GCA 72 bp GGGAGCCTGGCAGACAAAGGCCATGTTTTCTCCTGCTaGTGGACTGGGAATAAAACTGCTCACCATTACATG +
Preference number: 6 (lower is better)
Translates to: GSLADKGHVFSC*WTGNKTAHHYM
Trigger: CATGTAATGGTGAGCAGTTTTATTCCCAGTCCAGCAGCAGGAGAAAACATGGCCTTTGTCTGCCAGGCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649068.1
CDS CCA 72 bp ATAGGGTGGTTAGTGGTTGCTCTGAGTTGTGGGGAATaGGGGGATTGGAGGATCATAGCTAAAGGATACAGG +
Preference number: 6 (lower is better)
Translates to: IGWLVVALSCGE*GDWRIIAKGYR
Trigger: CCTGTATCCTTTAGCTATGATCCTCCAATCCCCCCATTCCCCACAACTCAGAGCAACCACTAACCACCCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000647622.1
ENST00000649972.1
ENST00000650241.1
CDS CCA 72 bp AGCCTGGCAGACAAAGGCCATGTTTTCTCCTGCTGCTaGACTGGGAATAAAACTGCTCACCATTACATGCAC +
Preference number: 6 (lower is better)
Translates to: SLADKGHVFSCC*TGNKTAHHYMH
Trigger: GTGCATGTAATGGTGAGCAGTTTTATTCCCAGTCCAGCAGCAGGAGAAAACATGGCCTTTGTCTGCCAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649068.1
CDS TCA 72 bp ATCGCCTCCTGGCACTTCTTCTGGGCAGTCTCAAACTaGCAGTTTTTACAGCAAGGACTGTTCCTGTCACTT +
Preference number: 6 (lower is better)
Translates to: IASWHFFWAVSN*QFLQQGLFLSL
Trigger: AAGTGACAGGAACAGTCCTTGCTGTAAAAACTGTCAGTTTGAGACTGCCCAGAAGAAGTGCCAGGAGGCGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647622.1
CDS CCA 72 bp ATCATGCTAATAGGACAGCAGGGTAATTCCAAGCGTTaGCCAGAACGTCAGGATAAGGAGTCCTCAGACACA +
Preference number: 6 (lower is better)
Translates to: IMLIGQQGNSKR*PERQDKESSDT
Trigger: TGTGTCTGAGGACTCCTTATCCTGACGTTCTGGCCAACGCTTGGAATTACCCTGCTGTCCTATTAGCATGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647622.1
ENST00000649972.1
ENST00000650241.1
CDS GCA 72 bp CTCTTAGGATATTACCATTGTGTCAAATGCCAGAGCTaGTGGCTAGACATACTACCGAGAGCAGAATGTCTG +
Preference number: 6 (lower is better)
Translates to: LLGYYHCVKCQS*WLDILPRAECL
Trigger: CAGACATTCTGCTCTCGGTAGTATGTCTAGCCAGCAGCTCTGGCATTTGACACAATGGTAATATCCTAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649798.1
CDS CCA 72 bp TTAGGATATTACCATTGTGTCAAATGCCAGAGCTGCTaGCTAGACATACTACCGAGAGCAGAATGTCTGTGC +
Preference number: 6 (lower is better)
Translates to: LGYYHCVKCQSC*LDILPRAECLC
Trigger: GCACAGACATTCTGCTCTCGGTAGTATGTCTAGCCAGCAGCTCTGGCATTTGACACAATGGTAATATCCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649798.1
CDS TCA 72 bp AGCCAAAATAGGACACAACTTCATTCACTAGGTCCCTaGAGACCTCCAGCTTTCTGTTTGCATCCTTATCAC +
Preference number: 6 (lower is better)
Translates to: SQNRTQLHSLGP*RPPAFCLHPYH
Trigger: GTGATAAGGATGCAAACAGAAAGCTGGAGGTCTTCAGGGACCTAGTGAATGAAGTTGTGTCCTATTTTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647622.1
ENST00000649972.1
ENST00000650241.1
CDS GCA 72 bp AGTGAAATGCTCTTAGGATATTACCATTGTGTCAAATaGCAGAGCTGCTGGCTAGACATACTACCGAGAGCA +
Preference number: 6 (lower is better)
Translates to: SEMLLGYYHCVK*QSCWLDILPRA
Trigger: TGCTCTCGGTAGTATGTCTAGCCAGCAGCTCTGGCATTTGACACAATGGTAATATCCTAAGAGCATTTCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649798.1
CDS CAA 72 bp TGCCATGTTGTAGTGCTTTTCACCAGGTTTTACCTCTaGTGGAGACTTGAGAATGCGAATCTATACTGCTCT +
Preference number: 6 (lower is better)
Translates to: CHVVVLFTRFYL*WRLENANLYCS
Trigger: AGAGCAGTATAGATTCGCATTCTCAAGTCTCCACAAGAGGTAAAACCTGGTGAAAAGCACTACAACATGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648857.1
ENST00000650241.1
CDS TCA 72 bp GAATGGCAACAGATAGGAGACGTATGCCCAAATGGATaGTTACATAAGAACTCCTCCAAATTCACAGTAGTG +
Preference number: 6 (lower is better)
Translates to: EWQQIGDVCPNG*LHKNSSKFTVV
Trigger: CACTACTGTGAATTTGGAGGAGTTCTTATGTAATCATCCATTTGGGCATACGTCTCCTATCTGTTGCCATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647622.1
ENST00000649972.1
ENST00000650241.1
CDS TCA 72 bp AGTGCTTTTCACCAGGTTTTACCTCTTGTGGAGACTTaGGAATGCGAATCTATACTGCTCTATCTGTATTCC +
Preference number: 6 (lower is better)
Translates to: SAFHQVLPLVET*ECESILLYLYS
Trigger: GGAATACAGATAGAGCAGTATAGATTCGCATTCTCAAGTCTCCACAAGAGGTAAAACCTGGTGAAAAGCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648857.1
ENST00000650241.1
CDS CAA 72 bp TGCCATGTTGTAGTGCTTTTCACCAGGTTTTACCTCTaGTGGAGACTTGAGAATGCGAATCTATACTTAAAG +
Preference number: 6 (lower is better)
Translates to: CHVVVLFTRFYL*WRLENANLYLK
Trigger: CTTTAAGTATAGATTCGCATTCTCAAGTCTCCACAAGAGGTAAAACCTGGTGAAAAGCACTACAACATGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647622.1
ENST00000649972.1
CDS TCA 72 bp AGTGCTTTTCACCAGGTTTTACCTCTTGTGGAGACTTaGGAATGCGAATCTATACTTAAAGAGATCATATAC +
Preference number: 6 (lower is better)
Translates to: SAFHQVLPLVET*ECESILKEIIY
Trigger: GTATATGATCTCTTTAAGTATAGATTCGCATTCTCAAGTCTCCACAAGAGGTAAAACCTGGTGAAAAGCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647622.1
ENST00000649972.1
CDS CAA 72 bp TCAAAGCTGAAAAAGTTAGTAGTGTTTCTACATGTGTaGAAGTCTGTAGATCTCTTTTTCTTACCGAATGCG +
Preference number: 6 (lower is better)
Translates to: SKLKKLVVFLHV*KSVDLFFLPNA
Trigger: CGCATTCGGTAAGAAAAAGAGATCTACAGACTTCAACACATGTAGAAACACTACTAACTTTTTCAGCTTTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000649227.1
CDS CAA 72 bp TCAAAGCTGAAAAAGTTAGTAGTGTTTCTACATGTGTaGAAGTCTGTAGATCTCTTTTTCTTACCGAATGCT +
Preference number: 6 (lower is better)
Translates to: SKLKKLVVFLHV*KSVDLFFLPNA
Trigger: AGCATTCGGTAAGAAAAAGAGATCTACAGACTTCAACACATGTAGAAACACTACTAACTTTTTCAGCTTTGA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000310823.8
ENST00000478059.1
ENST00000618923.2
ENST00000647622.1
ENST00000648002.1
ENST00000648548.1
ENST00000648857.1
ENST00000649972.1
ENST00000650241.1