RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADAM10 (Homo sapiens)

Ensembl gene IDs: ENSG00000137845

Ensembl transcript IDs: ENST00000260408.8, ENST00000396136.6, ENST00000402627.5, ENST00000439637.5, ENST00000461408.2, ENST00000462061.1, ENST00000470269.5, ENST00000475898.1, ENST00000482945.5, ENST00000497846.5, ENST00000558004.1, ENST00000558733.5, ENST00000560608.5, ENST00000561149.1, ENST00000561288.1

Found 439 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTGCAAGGGGATCCAGGTTGCAGGGTGATGGTTCGACCACTGAAGTaGCTACTCCACTGCACAGACCCTGTACTGGCACAAGTTGATGGG +
Preference number: 1 (lower is better)
Translates to: LQGDPGCRVMVRPLK*LLHCTDPVLAQVDG
Trigger: CCCATCAACTTGTGCCAGTACAGGGTCTGTGCAGTGGAGTAGGCACTTCAGTGGTCGAACCATCACCCTGCAACCTGGATCCCCTTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396136.6
3UTR CCA 90 bp CCATTTGATAACTCTCTCGGGGCCGCTGACGCTGGGGTTGCTGAATaGGCTGTGGAGGTCTCCTCCTCTTTAAAGTGCCTGGAAGTGGTT +
Preference number: 1 (lower is better)
Translates to: PFDNSLGAADAGVAE*AVEVSSSLKCLEVV
Trigger: AACCACTTCCAGGCACTTTAAAGAGGAGGAGACCTCCACAGCCCATTCAGCAACCCCAGCGTCAGCGGCCCCGAGAGAGTTATCAAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396136.6
3UTR GCA 90 bp CCAGGTTGCAGGGTGATGGTTCGACCACTGAAGTGCCTACTCCACTaGACAGACCCTGTACTGGCACAAGTTGATGGGTCCATTTTCTTC +
Preference number: 1 (lower is better)
Translates to: PGCRVMVRPLKCLLH*TDPVLAQVDGSIFF
Trigger: GAAGAAAATGGACCCATCAACTTGTGCCAGTACAGGGTCTGTGCAGTGGAGTAGGCACTTCAGTGGTCGAACCATCACCCTGCAACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396136.6
3UTR TCA 90 bp ACTGTAACTGCTGGTTTCTTTCCTTCCGCTAGACCCTCAGCTCCCTaGAGGCACAGACTGCAGTCCTTTGGGGGCTGTGAAAAATTGCAG +
Preference number: 1 (lower is better)
Translates to: TVTAGFFPSARPSAP*RHRLQSFGGCEKLQ
Trigger: CTGCAATTTTTCACAGCCCCCAAAGGACTGCAGTCTGTGCCTTCAGGGAGCTGAGGGTCTAGCGGAAGGAAAGAAACCAGCAGTTACAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR GCA 90 bp GTTTCTTTCCTTCCGCTAGACCCTCAGCTCCCTGAAGGCACAGACTaGAGTCCTTTGGGGGCTGTGAAAAATTGCAGCAGGTTGATAAGT +
Preference number: 1 (lower is better)
Translates to: VSFLPLDPQLPEGTD*SPLGAVKNCSRLIS
Trigger: ACTTATCAACCTGCTGCAATTTTTCACAGCCCCCAAAGGACTGCAGTCTGTGCCTTCAGGGAGCTGAGGGTCTAGCGGAAGGAAAGAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR TCA 90 bp AGCTGTGACAACGTCCCACCCTCCTTTCTCAGTCCTATCTCTGCATaGTCAGCTCTTGGATCACCAAAAACCTCCTCCTCAGCATGTATC +
Preference number: 1 (lower is better)
Translates to: SCDNVPPSFLSPISA*SALGSPKTSSSACI
Trigger: GATACATGCTGAGGAGGAGGTTTTTGGTGATCCAAGAGCTGATCATGCAGAGATAGGACTGAGAAAGGAGGGTGGGACGTTGTCACAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR CCA 90 bp CGTCCCACCCTCCTTTCTCAGTCCTATCTCTGCATGATCAGCTCTTaGATCACCAAAAACCTCCTCCTCAGCATGTATCACAGCTGGAAT +
Preference number: 1 (lower is better)
Translates to: RPTLLSQSYLCMISS*ITKNLLLSMYHSWN
Trigger: ATTCCAGCTGTGATACATGCTGAGGAGGAGGTTTTTGGTGATCCAAGAGCTGATCATGCAGAGATAGGACTGAGAAAGGAGGGTGGGACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR CCA 90 bp TCTAAGAGACCCAATCCAGCCTACAAATCAAAGAACATCCCCAAATaGTTTACCCTTCTCCCGACCAAACCCTTTCCCCTGGGCGACAGA +
Preference number: 1 (lower is better)
Translates to: SKRPNPAYKSKNIPK*FTLLPTKPFPLGDR
Trigger: TCTGTCGCCCAGGGGAAAGGGTTTGGTCGGGAGAAGGGTAAACCATTTGGGGATGTTCTTTGATTTGTAGGCTGGATTGGGTCTCTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461408.2
3UTR TCA 90 bp CCCTTGCACAGTCTGAATCATCCCGACACTTCTCAGACTTTGACTTaGATGCACACTGTGCTGTACAACAAGGACCTTGACTTGGACTGC +
Preference number: 1 (lower is better)
Translates to: PLHSLNHPDTSQTLT*MHTVLYNKDLDLDC
Trigger: GCAGTCCAAGTCAAGGTCCTTGTTGTACAGCACAGTGTGCATTCAAGTCAAAGTCTGAGAAGTGTCGGGATGATTCAGACTGTGCAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396136.6
3UTR TCA 90 bp GCAAACTACACCATTCTGTTGTGTTCCCACTGCTGGTTTAGGATTTaGCTTCCCTGGGTCTGCCCAATCAATAGTACTCCTTCATCTGCT +
Preference number: 1 (lower is better)
Translates to: ANYTILLCSHCWFRI*LPWVCPINSTPSSA
Trigger: AGCAGATGAAGGAGTACTATTGATTGGGCAGACCCAGGGAAGTCAAATCCTAAACCAGCAGTGGGAACACAACAGAATGGTGTAGTTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR GCA 90 bp ACTATAGCCAAGCTCAAGGAAATGGAGATTAATAAAGCCCAGTCCTaGAGAGGAATCGAGGGAAAGGGCAATCCAGGGAATAGGAAAAGC +
Preference number: 1 (lower is better)
Translates to: TIAKLKEMEINKAQS*RGIEGKGNPGNRKS
Trigger: GCTTTTCCTATTCCCTGGATTGCCCTTTCCCTCGATTCCTCTGCAGGACTGGGCTTTATTAATCTCCATTTCCTTGAGCTTGGCTATAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR TCA 90 bp CAACCCAAGCCAGACCAAGTACGCCATCATCAAAATCTCGGTCTGTaGAGACATAGGCCAAACAGTAGTCATCATGATTCTGCTCAGAAT +
Preference number: 1 (lower is better)
Translates to: QPKPDQVRHHQNLGL*RHRPNSSHHDSAQN
Trigger: ATTCTGAGCAGAATCATGATGACTACTGTTTGGCCTATGTCTTCACAGACCGAGATTTTGATGATGGCGTACTTGGTCTGGCTTGGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396136.6
3UTR CCA 90 bp TGTATGCCTATTACAGTCTGTGAAGTTTGGTTTAGGGTCAGATGCTaGGCAGAGAGCTGTGAAGCCATTACATATTCCTTCCCTTGCACA +
Preference number: 1 (lower is better)
Translates to: CMPITVCEVWFRVRC*AESCEAITYSFPCT
Trigger: TGTGCAAGGGAAGGAATATGTAATGGCTTCACAGCTCTCTGCCCAGCATCTGACCCTAAACCAAACTTCACAGACTGTAATAGGCATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396136.6
3UTR CCA 90 bp CCCATTAATGCACACTTGTGTATGCCTATTACAGTCTGTGAAGTTTaGTTTAGGGTCAGATGCTGGGCAGAGAGCTGTGAAGCCATTACA +
Preference number: 1 (lower is better)
Translates to: PINAHLCMPITVCEV*FRVRCWAESCEAIT
Trigger: TGTAATGGCTTCACAGCTCTCTGCCCAGCATCTGACCCTAAACCAAACTTCACAGACTGTAATAGGCATACACAAGTGTGCATTAATGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396136.6
3UTR TCA 90 bp ACTCCCAGATTGTTGGGCCAATATCCTAAGGAGAATAACCAAGTATaGCACCTGCCAAAGTACAAGCCAGCTCTTCAGCAAATGAATGCA +
Preference number: 1 (lower is better)
Translates to: TPRLLGQYPKENNQV*HLPKYKPALQQMNA
Trigger: TGCATTCATTTGCTGAAGAGCTGGCTTGTACTTTGGCAGGTGTCATACTTGGTTATTCTCCTTAGGATATTGGCCCAACAATCTGGGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR TCA 90 bp CACTGTTTTGACAATCCACTAACTACACTGTACATCTACTCCACCTaGAAGTTTAACGAAACTCTTCAAGTTGGGTCACCCAGGGACCGA +
Preference number: 1 (lower is better)
Translates to: HCFDNPLTTLYIYST*KFNETLQVGSPRDR
Trigger: TCGGTCCCTGGGTGACCCAACTTGAAGAGTTTCGTTAAACTTTCAGGTGGAGTAGATGTACAGTGTAGTTAGTGGATTGTCAAAACAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461408.2
3UTR GCA 90 bp AACAAGGACCTTGACTTGGACTGCACTGTTTCCCAGGTTTCAGTTTaGATTTTCTTCCCTCTGGTTGATTTGCATCGAAGCAGCATTCAT +
Preference number: 1 (lower is better)
Translates to: NKDLDLDCTVSQVSV*IFFPLVDLHRSSIH
Trigger: ATGAATGCTGCTTCGATGCAAATCAACCAGAGGGAAGAAAATGCAAACTGAAACCTGGGAAACAGTGCAGTCCAAGTCAAGGTCCTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396136.6
3UTR GCA 90 bp TCACAGATAGAACCTGCACATTGCCCATTAATGCACACTTGTGTATaGCTATTACAGTCTGTGAAGTTTGGTTTAGGGTCAGATGCTGGG +
Preference number: 1 (lower is better)
Translates to: SQIEPAHCPLMHTCV*LLQSVKFGLGSDAG
Trigger: CCCAGCATCTGACCCTAAACCAAACTTCACAGACTGTAATAGGCATACACAAGTGTGCATTAATGGGCAATGTGCAGGTTCTATCTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396136.6
3UTR CCA 90 bp TGGACTGCACTGTTTCCCAGGTTTCAGTTTGCATTTTCTTCCCTCTaGTTGATTTGCATCGAAGCAGCATTCATCTTTACACTGGTCACT +
Preference number: 1 (lower is better)
Translates to: WTALFPRFQFAFSSL*LICIEAAFIFTLVT
Trigger: AGTGACCAGTGTAAAGATGAATGCTGCTTCGATGCAAATCAACCAGAGGGAAGAAAATGCAAACTGAAACCTGGGAAACAGTGCAGTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396136.6
3UTR GCA 90 bp CTGTTTCCCAGGTTTCAGTTTGCATTTTCTTCCCTCTGGTTGATTTaGATCGAAGCAGCATTCATCTTTACACTGGTCACTATAGCCACA +
Preference number: 1 (lower is better)
Translates to: LFPRFQFAFSSLWLI*IEAAFIFTLVTIAT
Trigger: TGTGGCTATAGTGACCAGTGTAAAGATGAATGCTGCTTCGATGCAAATCAACCAGAGGGAAGAAAATGCAAACTGAAACCTGGGAAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396136.6
3UTR TCA 90 bp CAGCCTTGGCCAGTGGTAACTTCTAAGGTGCCTCCTGAATCTTTCTaGTCTGGTACAAAACAATGTTTCCTAGGTTCTTCTTGTACATTT +
Preference number: 1 (lower is better)
Translates to: QPWPVVTSKVPPESF*SGTKQCFLGSSCTF
Trigger: AAATGTACAAGAAGAACCTAGGAAACATTGTTTTGTACCAGATCAGAAAGATTCAGGAGGCACCTTAGAAGTTACCACTGGCCAAGGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR GCA 90 bp AGATCAGGAGGCTTCATCATGATGAGATGTGACTTTTGGCAGAACTaGTTCATAGGTGGTATATGTACTTCCATTAGGAGGCACAAAATC +
Preference number: 1 (lower is better)
Translates to: RSGGFIMMRCDFWQN*FIGGICTSIRRHKI
Trigger: GATTTTGTGCCTCCTAATGGAAGTACATATACCACCTATGAAGCAGTTCTGCCAAAAGTCACATCTCATCATGATGAAGCCTCCTGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR TCA 90 bp GGAAGTGGTTTAGGAGGAGGCAACTTTGGATTACTACTTGGAGTATaGACACTGCATATCTTAATAAATCCAGCCATTAGCATGATCAGA +
Preference number: 1 (lower is better)
Translates to: GSGLGGGNFGLLLGV*TLHILINPAISMIR
Trigger: TCTGATCATGCTAATGGCTGGATTTATTAAGATATGCAGTGTTCATACTCCAAGTAGTAATCCAAAGTTGCCTCCTCCTAAACCACTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396136.6
3UTR TCA 90 bp CATTTCAAAACTGCCTGTGTAAAGCATTACAGAATCCTGGACCACTaGATACCACCATTCTCTGTTATCCTGAGTATGTCAATTAAACAG +
Preference number: 1 (lower is better)
Translates to: HFKTACVKHYRILDH*IPPFSVILSMSIKQ
Trigger: CTGTTTAATTGACATACTCAGGATAACAGAGAATGGTGGTATTCAGTGGTCCAGGATTCTGTAATGCTTTACACAGGCAGTTTTGAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260408.8
ENST00000402627.5
3UTR TCA 90 bp GAAATAATAATAATTAGGTCTTACTACAGGGACAAATACAAGGACTaGGGGTCGAGTAGTTTGCTCCGCTTGGACAAATCAGATTTCACT +
Preference number: 1 (lower is better)
Translates to: EIIIIRSYYRDKYKD*GSSSLLRLDKSDFT
Trigger: AGTGAAATCTGATTTGTCCAAGCGGAGCAAACTACTCGACCCTCAGTCCTTGTATTTGTCCCTGTAGTAAGACCTAATTATTATTATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR TCA 90 bp TCTCCTTTAACCCATCGTTGTCTTTTCTCTTTGCATTTCTGTTGTTaGAGCAGGACCATATGTCTTGTAGTTTTCCAGAGTCTGGATTTT +
Preference number: 1 (lower is better)
Translates to: SPLTHRCLFSLHFCC*SRTICLVVFQSLDF
Trigger: AAAATCCAGACTCTGGAAAACTACAAGACATATGGTCCTGCTTCAACAACAGAAATGCAAAGAGAAAAGACAACGATGGGTTAAAGGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR GCA 90 bp CCATTTTCTTCATACAGCATACATGGCATAATTCTTTATCATCTTTaGCATCAGAACTGGCACACGTACACTCCTCTAAGCCATATTTCT +
Preference number: 1 (lower is better)
Translates to: PFSSYSIHGIILYHL*HQNWHTYTPLSHIS
Trigger: AGAAATATGGCTTAGAGGAGTGTACGTGTGCCAGTTCTGATGGCAAAGATGATAAAGAATTATGCCATGTATGCTGTATGAAGAAAATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396136.6
3UTR TCA 90 bp AACATTTACTCCAACGTGGGACACACAGGCTTAATGTGGATAAGCTaGCCATACTCCTTGACATGTTTAACAGAGAACAAATATTTTACT +
Preference number: 1 (lower is better)
Translates to: NIYSNVGHTGLMWIS*PYSLTCLTENKYFT
Trigger: AGTAAAATATTTGTTCTCTGTTAAACATGTCAAGGAGTATGGTCAGCTTATCCACATTAAGCCTGTGTGTCCCACGTTGGAGTAAATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR-3UTR GCA 90 bp CAATCCAGCCTACAAATCAAAGAACATCCCCAAATGGTTTACCCTTCTCCCGACGCGGGTGATGACTGCTaGCACTCCACGGGCGGCCCC +
Preference number: 2 (lower is better)
Translates to: QSSLQIKEHPQMVYPSPDAGDDC*HSTGGP
Trigger: GGGGCCGCCCGTGGAGTGGCAGCAGTCATCACCCGC...GTCGGGAGAAGGGTAAACCATTTGGGGATGTTCTTTGATTTGTAGGCTGGATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461408.2
3UTR CAA 90 bp CTTCCGCTAGACCCTCAGCTCCCTGAAGGCACAGACTGCAGTCCTTaGGGGGCTGTGAAAAATTGCAGCAGGTTGATAAGTGAATGGGAG +
Preference number: 2 (lower is better)
Translates to: LPLDPQLPEGTDCSP*GAVKNCSRLISEWE
Trigger: CTCCCATTCACTTATCAACCTGCTGCAATTTTTCACAGCCCCCAAAGGACTGCAGTCTGTGCCTTCAGGGAGCTGAGGGTCTAGCGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR-3UTR TCA 90 bp GTTGCAAGGGGATCCAGGTTGCAGGGTGATGGTTCGACCACTGAAGTGCCTACTGCTTTCTTCCATGAGTaGAGCAGAAGAGCACAGGGT +
Preference number: 2 (lower is better)
Translates to: VARGSRLQGDGSTTEVPTAFFHE*SRRAQG
Trigger: ACCCTGTGCTCTTCTGCTTCACTCATGGAAGAAAGC...AGTAGGCACTTCAGTGGTCGAACCATCACCCTGCAACCTGGATCCCCTTGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396136.6
3UTR-3UTR TCA 90 bp GTTTACCCTTCTCCCGACCAAACCCTTTCCCCTGGGCGACAGAATGTTTTCAAGCAACACACCCTCCTGTaGTCTCTCTCCAAACACAGG +
Preference number: 2 (lower is better)
Translates to: VYPSPDQTLSPGRQNVFKQHTLL*SLSKHR
Trigger: CCTGTGTTTGGAGAGAGATCACAGGAGGGTGTGTTG...CTTGAAAACATTCTGTCGCCCAGGGGAAAGGGTTTGGTCGGGAGAAGGGTAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461408.2
3UTR-3UTR GCA 90 bp CCAGGTTGCAGGGTGATGGTTCGACCACTGAAGTGCCTACTCCACTGCACAGACTCCCTCTGGTTGATTTaGATCGAAGCAGCATTCATC +
Preference number: 2 (lower is better)
Translates to: PGCRVMVRPLKCLLHCTDSLWLI*IEAAFI
Trigger: GATGAATGCTGCTTCGATGCAAATCAACCAGAGGGA...GTCTGTGCAGTGGAGTAGGCACTTCAGTGGTCGAACCATCACCCTGCAACCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396136.6
3UTR-3UTR GCA 90 bp GTTGCAAGGGGATCCAGGTTGCAGGGTGATGGTTCGACCACTGAAGTGCCTACTGACCTTGACTTGGACTaGACTGTTTCCCAGGTTTCA +
Preference number: 2 (lower is better)
Translates to: VARGSRLQGDGSTTEVPTDLDLD*TVSQVS
Trigger: TGAAACCTGGGAAACAGTGCAGTCCAAGTCAAGGTC...AGTAGGCACTTCAGTGGTCGAACCATCACCCTGCAACCTGGATCCCCTTGCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396136.6
3UTR-3UTR CCA 90 bp GATCCAGGTTGCAGGGTGATGGTTCGACCACTGAAGTGCCTACTCCACTGCACAACAGTCTGTGAAGTTTaGTTTAGGGTCAGATGCTGG +
Preference number: 2 (lower is better)
Translates to: DPGCRVMVRPLKCLLHCTTVCEV*FRVRCW
Trigger: CCAGCATCTGACCCTAAACCAAACTTCACAGACTGT...TGTGCAGTGGAGTAGGCACTTCAGTGGTCGAACCATCACCCTGCAACCTGGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396136.6
3UTR CAA 90 bp ACGTCCCACCCTCCTTTCTCAGTCCTATCTCTGCATGATCAGCTCTaGGATCACCAAAAACCTCCTCCTCAGCATGTATCACAGCTGGAA +
Preference number: 2 (lower is better)
Translates to: TSHPPFSVLSLHDQL*DHQKPPPQHVSQLE
Trigger: TTCCAGCTGTGATACATGCTGAGGAGGAGGTTTTTGGTGATCCAAGAGCTGATCATGCAGAGATAGGACTGAGAAAGGAGGGTGGGACGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR-3UTR TCA 90 bp AAATCGTTGCAAGGGGATCCAGGTTGCAGGGTGATGGTTCGACCACTGAAGTGCTACAGCTTTCTTCCATaGGTGAAGCAGAAGAGCACA +
Preference number: 2 (lower is better)
Translates to: KSLQGDPGCRVMVRPLKCYSFLP*VKQKST
Trigger: TGTGCTCTTCTGCTTCACTCATGGAAGAAAGCTGTA...GCACTTCAGTGGTCGAACCATCACCCTGCAACCTGGATCCCCTTGCAACGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396136.6
3UTR-3UTR CCA 90 bp CCAGGTTGCAGGGTGATGGTTCGACCACTGAAGTGCCTACTCCACTGCACAGACTTCCGGAGAAGTCTGTaGTCTGGTAAATTGTATCAA +
Preference number: 2 (lower is better)
Translates to: PGCRVMVRPLKCLLHCTDFRRSL*SGKLYQ
Trigger: TTGATACAATTTACCAGACCACAGACTTCTCCGGAA...GTCTGTGCAGTGGAGTAGGCACTTCAGTGGTCGAACCATCACCCTGCAACCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396136.6
3UTR-3UTR TCA 90 bp AAATCGTTGCAAGGGGATCCAGGTTGCAGGGTGATGGTTCGACCACTGAAGTGCAAGTTTGCCTGCAAGTaGAGAAAATGCAGCAACGAA +
Preference number: 2 (lower is better)
Translates to: KSLQGDPGCRVMVRPLKCKFACK*RKCSNE
Trigger: TTCGTTGCTGCATTTTCTTCACTTGCAGGCAAACTT...GCACTTCAGTGGTCGAACCATCACCCTGCAACCTGGATCCCCTTGCAACGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396136.6
3UTR-3UTR TCA 90 bp ACTACAGGGACAAATACAAGGACTGAGGGTCGAGTAGTTTGCTCCGCTTGGACACTTCCCCAAACTGCATaGCATTGCTTGACACTACAG +
Preference number: 2 (lower is better)
Translates to: TTGTNTRTEGRVVCSAWTLPQTA*HCLTLQ
Trigger: CTGTAGTGTCAAGCAATGTCATGCAGTTTGGGGAAG...TGTCCAAGCGGAGCAAACTACTCGACCCTCAGTCCTTGTATTTGTCCCTGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR-3UTR GCA 90 bp ACTACAGGGACAAATACAAGGACTGAGGGTCGAGTAGTTTGCTCCGCTTGGACACCCACTTCCAACCTTTaGACAGTCCAAAAACAAAGG +
Preference number: 2 (lower is better)
Translates to: TTGTNTRTEGRVVCSAWTPTSNL*TVQKQR
Trigger: CCTTTGTTTTTGGACTGTGCAAAGGTTGGAAGTGGG...TGTCCAAGCGGAGCAAACTACTCGACCCTCAGTCCTTGTATTTGTCCCTGTAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR-3UTR TCA 90 bp ACTACAGGGACAAATACAAGGACTGAGGGTCGAGTAGTTTGCTCCGCTTGGACAAAGTTTGCCTGCAAGTaGAGAAAATGCAGCAACGAA +
Preference number: 2 (lower is better)
Translates to: TTGTNTRTEGRVVCSAWTKFACK*RKCSNE
Trigger: TTCGTTGCTGCATTTTCTTCACTTGCAGGCAAACTT...TGTCCAAGCGGAGCAAACTACTCGACCCTCAGTCCTTGTATTTGTCCCTGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR-3UTR TCA 90 bp ACTACAGGGACAAATACAAGGACTGAGGGTCGAGTAGTTTGCTCCGCTTGGACAGTGGTAAAAGTTTATTaGGAGCCAAGTTTGCCTGCA +
Preference number: 2 (lower is better)
Translates to: TTGTNTRTEGRVVCSAWTVVKVY*EPSLPA
Trigger: TGCAGGCAAACTTGGCTCTCAATAAACTTTTACCAC...TGTCCAAGCGGAGCAAACTACTCGACCCTCAGTCCTTGTATTTGTCCCTGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR-3UTR TCA 90 bp ACTACAGGGACAAATACAAGGACTGAGGGTCGAGTAGTTTGCTCCGCTTGGACAACTATCCTAAGACTGTaGCAAACACGAAGTACCCAA +
Preference number: 2 (lower is better)
Translates to: TTGTNTRTEGRVVCSAWTTILRL*QTRSTQ
Trigger: TTGGGTACTTCGTGTTTGTCACAGTCTTAGGATAGT...TGTCCAAGCGGAGCAAACTACTCGACCCTCAGTCCTTGTATTTGTCCCTGTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR-3UTR TCA 90 bp TGTGTATGCCTATTACAGTCTGTGAAGTTTGGTTTAGGGTCAGATGCTGGGCAGGTACAACAAGGACCTTaGCTTGGACTGCACTGTTTC +
Preference number: 2 (lower is better)
Translates to: CVCLLQSVKFGLGSDAGQVQQGP*LGLHCF
Trigger: GAAACAGTGCAGTCCAAGTCAAGGTCCTTGTTGTAC...CTGCCCAGCATCTGACCCTAAACCAAACTTCACAGACTGTAATAGGCATACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396136.6
3UTR-3UTR GCA 90 bp TTCTTATCATCTAGCCAAGGCCCTGGCACAATCAAGTGCCTAAGAAGTATCTGTGGCAGTGTGTGTACCTaGCAAAATCCTACCACAGGA +
Preference number: 2 (lower is better)
Translates to: FLSSSQGPGTIKCLRSICGSVCT*QNPTTG
Trigger: TCCTGTGGTAGGATTTTGGCAGGTACACACACTGCC...ACAGATACTTCTTAGGCACTTGATTGTGCCAGGGCCTTGGCTAGATGATAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR-3UTR GCA 90 bp AAGGTAACTGGTCAATGCATATCAGCAAATGCATACCATAAAAGCCAAAGAATTGCAATCGCGGCTCACTaGAGCCTCTGCCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: KVTGQCISANAYHKSQRIAIAAH*SLCLLG
Trigger: ACCCAGGAGGCAGAGGCTGCAGTGAGCCGCGATTGC...AATTCTTTGGCTTTTATGGTATGCATTTGCTGATATGCATTGACCAGTTACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR-3UTR TCA 90 bp TGTGTATGCCTATTACAGTCTGTGAAGTTTGGTTTAGGGTCAGATGCTGGGCAGTCAATCGCTTTAACATaGCTGGATATCTGGGCAATC +
Preference number: 2 (lower is better)
Translates to: CVCLLQSVKFGLGSDAGQSIALT*LDIWAI
Trigger: GATTGCCCAGATATCCAGTCATGTTAAAGCGATTGA...CTGCCCAGCATCTGACCCTAAACCAAACTTCACAGACTGTAATAGGCATACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396136.6
3UTR-3UTR TCA 90 bp ATGTCAGATGAAAAAGGCTCCTCTAACAGAGAGTCTCCCGCACATAATCCTTTTGAGGGGGCACTGTTTTaGCAATCCACTAACTACACT +
Preference number: 2 (lower is better)
Translates to: MSDEKGSSNRESPAHNPFEGALF*QSTNYT
Trigger: AGTGTAGTTAGTGGATTGTCAAAACAGTGCCCCCTC...AAAAGGATTATGTGCGGGAGACTCTCTGTTAGAGGAGCCTTTTTCATCTGACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000461408.2
3UTR CAA 90 bp ACTGTTTCCCAGGTTTCAGTTTGCATTTTCTTCCCTCTGGTTGATTaGCATCGAAGCAGCATTCATCTTTACACTGGTCACTATAGCCAC +
Preference number: 2 (lower is better)
Translates to: TVSQVSVCIFFPLVD*HRSSIHLYTGHYSH
Trigger: GTGGCTATAGTGACCAGTGTAAAGATGAATGCTGCTTCGATGCAAATCAACCAGAGGGAAGAAAATGCAAACTGAAACCTGGGAAACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396136.6
3UTR-3UTR TCA 90 bp TTCTTATCATCTAGCCAAGGCCCTGGCACAATCAAGTGCCTAAGAAGTATCTGTGCTAAGATTGCTGGATaGCTGATAGCTTCAAGAGTT +
Preference number: 2 (lower is better)
Translates to: FLSSSQGPGTIKCLRSICAKIAG*LIASRV
Trigger: AACTCTTGAAGCTATCAGTCATCCAGCAATCTTAGC...ACAGATACTTCTTAGGCACTTGATTGTGCCAGGGCCTTGGCTAGATGATAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR-3UTR TCA 90 bp GGGAAACGGAAAGGATTTGTAGGGTCCTTCTCATCAGCAGTTGTATTGATTCTTGCAGCATGTTCTTCTTaGGGTATCTGTGTTACTTCC +
Preference number: 2 (lower is better)
Translates to: GKRKGFVGSFSSAVVLILAACSS*GICVTS
Trigger: GGAAGTAACACAGATACCTCAAGAAGAACATGCTGC...AAGAATCAATACAACTGCTGATGAGAAGGACCCTACAAATCCTTTCCGTTTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396136.6
3UTR-3UTR GCA 90 bp TTCTTATCATCTAGCCAAGGCCCTGGCACAATCAAGTGCCTAAGAAGTATCTGTAGAAATGCCTTCTCATaGACAAGCCCCGAAATTTCA +
Preference number: 2 (lower is better)
Translates to: FLSSSQGPGTIKCLRSICRNAFS*TSPEIS
Trigger: TGAAATTTCGGGGCTTGTGCATGAGAAGGCATTTCT...ACAGATACTTCTTAGGCACTTGATTGTGCCAGGGCCTTGGCTAGATGATAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR-3UTR CCA 90 bp TTCTTATCATCTAGCCAAGGCCCTGGCACAATCAAGTGCCTAAGAAGTATCTGTCATCTTGATTCGCAGTaGAAAGAGTTCAGTGCATGT +
Preference number: 2 (lower is better)
Translates to: FLSSSQGPGTIKCLRSICHLDSQ*KEFSAC
Trigger: ACATGCACTGAACTCTTTCCACTGCGAATCAAGATG...ACAGATACTTCTTAGGCACTTGATTGTGCCAGGGCCTTGGCTAGATGATAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR-3UTR CCA 90 bp TTCTTATCATCTAGCCAAGGCCCTGGCACAATCAAGTGCCTAAGAAGTATCTGTCGTGGTAGTATAACTTaGTACATCTATCTGGGAGAC +
Preference number: 2 (lower is better)
Translates to: FLSSSQGPGTIKCLRSICRGSIT*YIYLGD
Trigger: GTCTCCCAGATAGATGTACCAAGTTATACTACCACG...ACAGATACTTCTTAGGCACTTGATTGTGCCAGGGCCTTGGCTAGATGATAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR-3UTR CCA 90 bp ACAACAAGGACCTTGACTTGGACTGCACTGTTTCCCAGGTTTCAGTTTGCATTTTTTCCTCAGAAGTTCTaGACCATTAGCAGCATGTTC +
Preference number: 2 (lower is better)
Translates to: TTRTLTWTALFPRFQFAFFPQKF*TISSMF
Trigger: GAACATGCTGCTAATGGTCCAGAACTTCTGAGGAAA...AAATGCAAACTGAAACCTGGGAAACAGTGCAGTCCAAGTCAAGGTCCTTGTTGT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000396136.6
3UTR-3UTR CCA 90 bp ACACTGCATATCTTAATAAATCCAGCCATTAGCATGATCAGAGCAATTCCCATATTTAGGGTCAGATGCTaGGCAGAGAGCTGTGAAGCC +
Preference number: 2 (lower is better)
Translates to: TLHILINPAISMIRAIPIFRVRC*AESCEA
Trigger: GGCTTCACAGCTCTCTGCCCAGCATCTGACCCTAAA...TATGGGAATTGCTCTGATCATGCTAATGGCTGGATTTATTAAGATATGCAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396136.6
3UTR CAA 90 bp CTTCATCTGCTTCCAGATTTCGTTCTTGTTCAATTCACCTTGTCCTaGTTGGATTACCCCACACCCTATCACTTTAGTGTAGATTTCAGG +
Preference number: 2 (lower is better)
Translates to: LHLLPDFVLVQFTLS*LDYPTPYHFSVDFR
Trigger: CCTGAAATCTACACTAAAGTGATAGGGTGTGGGGTAATCCAACAAGGACAAGGTGAATTGAACAAGAACGAAATCTGGAAGCAGATGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR CAA 90 bp GTACTCCTTCATCTGCTTCCAGATTTCGTTCTTGTTCAATTCACCTaGTCCTTGTTGGATTACCCCACACCCTATCACTTTAGTGTAGAT +
Preference number: 2 (lower is better)
Translates to: VLLHLLPDFVLVQFT*SLLDYPTPYHFSVD
Trigger: ATCTACACTAAAGTGATAGGGTGTGGGGTAATCCAACAAGGACAAGGTGAATTGAACAAGAACGAAATCTGGAAGCAGATGAAGGAGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR CAA 90 bp ACTGCACTGTTTCCCAGGTTTCAGTTTGCATTTTCTTCCCTCTGGTaGATTTGCATCGAAGCAGCATTCATCTTTACACTGGTCACTATA +
Preference number: 2 (lower is better)
Translates to: TALFPRFQFAFSSLW*ICIEAAFIFTLVTI
Trigger: TATAGTGACCAGTGTAAAGATGAATGCTGCTTCGATGCAAATCAACCAGAGGGAAGAAAATGCAAACTGAAACCTGGGAAACAGTGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396136.6
3UTR-3UTR TCA 90 bp AAAGCATTACAGAATCCTGGACCACTGAATACCACCATTCTCTGTTATCCTGAGAAGTTTGCCTGCAAGTaGAGAAAATGCAGCAACGAA +
Preference number: 2 (lower is better)
Translates to: KALQNPGPLNTTILCYPEKFACK*RKCSNE
Trigger: TTCGTTGCTGCATTTTCTTCACTTGCAGGCAAACTT...CTCAGGATAACAGAGAATGGTGGTATTCAGTGGTCCAGGATTCTGTAATGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260408.8
ENST00000402627.5
3UTR-3UTR TCA 90 bp TTCTTATCATCTAGCCAAGGCCCTGGCACAATCAAGTGCCTAAGAAGTATCTGTTTAATGTGGATAAGCTaGCCATACTCCTTGACATGT +
Preference number: 2 (lower is better)
Translates to: FLSSSQGPGTIKCLRSICLMWIS*PYSLTC
Trigger: ACATGTCAAGGAGTATGGTCAGCTTATCCACATTAA...ACAGATACTTCTTAGGCACTTGATTGTGCCAGGGCCTTGGCTAGATGATAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR-3UTR CCA 90 bp ATCTCGGTCTGTGAAGACATAGGCCAAACAGTAGTCATCATGATTCTGCTCAGACTCCACACCAATATTTaGGAAACGGAAAGGATTTGT +
Preference number: 2 (lower is better)
Translates to: ISVCEDIGQTVVIMILLRLHTNI*ETERIC
Trigger: ACAAATCCTTTCCGTTTCCCAAATATTGGTGTGGAG...TCTGAGCAGAATCATGATGACTACTGTTTGGCCTATGTCTTCACAGACCGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396136.6
3UTR CAA 90 bp CATCTGCTTCCAGATTTCGTTCTTGTTCAATTCACCTTGTCCTTGTaGGATTACCCCACACCCTATCACTTTAGTGTAGATTTCAGGAAA +
Preference number: 2 (lower is better)
Translates to: HLLPDFVLVQFTLSL*DYPTPYHFSVDFRK
Trigger: TTTCCTGAAATCTACACTAAAGTGATAGGGTGTGGGGTAATCCAACAAGGACAAGGTGAATTGAACAAGAACGAAATCTGGAAGCAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR CAA 90 bp CCCAGATGTTGCTCTTGCATACATGATGTAATTGCCATTTTCTTTTaGACCCAAATTCTTAGATTCTCCTGGTGTGCACTCTGTTCCAGA +
Preference number: 2 (lower is better)
Translates to: PRCCSCIHDVIAIFF*TQILRFSWCALCSR
Trigger: TCTGGAACAGAGTGCACACCAGGAGAATCTAAGAATTTGGGTCAAAAAGAAAATGGCAATTACATCATGTATGCAAGAGCAACATCTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396136.6
3UTR-3UTR GCA 90 bp TTCTTATCATCTAGCCAAGGCCCTGGCACAATCAAGTGCCTAAGAAGTATCTGTAAGGTAACTGGTCAATaGATATCAGCAAATGCATAC +
Preference number: 2 (lower is better)
Translates to: FLSSSQGPGTIKCLRSICKVTGQ*ISANAY
Trigger: GTATGCATTTGCTGATATGCATTGACCAGTTACCTT...ACAGATACTTCTTAGGCACTTGATTGTGCCAGGGCCTTGGCTAGATGATAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR-3UTR CCA 90 bp AAGGTAACTGGTCAATGCATATCAGCAAATGCATACCATAAAAGCCAAAGAATTATCTGGCTTGCACCCTaGTTTTGGGAAACCTTGACC +
Preference number: 2 (lower is better)
Translates to: KVTGQCISANAYHKSQRIIWLAP*FWETLT
Trigger: GGTCAAGGTTTCCCAAAACCAGGGTGCAAGCCAGAT...AATTCTTTGGCTTTTATGGTATGCATTTGCTGATATGCATTGACCAGTTACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR-3UTR CCA 90 bp ATCTCGGTCTGTGAAGACATAGGCCAAACAGTAGTCATCATGATTCTGCTCAGATCTACACCAGTCATCTaGTATTTCCTCATTCTTTCA +
Preference number: 2 (lower is better)
Translates to: ISVCEDIGQTVVIMILLRSTPVI*YFLILS
Trigger: TGAAAGAATGAGGAAATACCAGATGACTGGTGTAGA...TCTGAGCAGAATCATGATGACTACTGTTTGGCCTATGTCTTCACAGACCGAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396136.6
3UTR-3UTR CCA 90 bp TGCATTTTCTTCCCTCTGGTTGATTTGCATCGAAGCAGCATTCATCTTTACACTATTCTTAGATTCTCCTaGTGTGCACTCTGTTCCAGA +
Preference number: 2 (lower is better)
Translates to: CIFFPLVDLHRSSIHLYTILRFS*CALCSR
Trigger: TCTGGAACAGAGTGCACACCAGGAGAATCTAAGAAT...AGTGTAAAGATGAATGCTGCTTCGATGCAAATCAACCAGAGGGAAGAAAATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396136.6
3UTR-3UTR TCA 90 bp ACACTGCATATCTTAATAAATCCAGCCATTAGCATGATCAGAGCAATTCCCATATTTCTTCCCTCTGGTTaGTTTGCATCGAAGCAGCAT +
Preference number: 2 (lower is better)
Translates to: TLHILINPAISMIRAIPIFLPSG*FASKQH
Trigger: ATGCTGCTTCGATGCAAATCAACCAGAGGGAAGAAA...TATGGGAATTGCTCTGATCATGCTAATGGCTGGATTTATTAAGATATGCAGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396136.6
3UTR CAA 90 bp TATCCTAAGACTGTGACAAACACGAAGTACCCAAAGCATAAAGTGTaGAAGACACCTCACAAAACAAGACTGATCAGAGAAAGTTGTCAT +
Preference number: 2 (lower is better)
Translates to: YPKTVTNTKYPKHKV*KTPHKTRLIRESCH
Trigger: ATGACAACTTTCTCTGATCAGTCTTGTTTTGTGAGGTGTCTTCAACACTTTATGCTTTGGGTACTTCGTGTTTGTCACAGTCTTAGGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR CAA 90 bp TCCATTTTCTTCATACAGCATACATGGCATAATTCTTTATCATCTTaGCCATCAGAACTGGCACACGTACACTCCTCTAAGCCATATTTC +
Preference number: 2 (lower is better)
Translates to: SIFFIQHTWHNSLSS*PSELAHVHSSKPYF
Trigger: GAAATATGGCTTAGAGGAGTGTACGTGTGCCAGTTCTGATGGCAAAGATGATAAAGAATTATGCCATGTATGCTGTATGAAGAAAATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396136.6
3UTR-3UTR GCA 90 bp ACACTGCATATCTTAATAAATCCAGCCATTAGCATGATCAGAGCAATTCCCATACCCAGATGTTGCTCTTaGATACATGATGTAATTGCC +
Preference number: 2 (lower is better)
Translates to: TLHILINPAISMIRAIPIPRCCS*IHDVIA
Trigger: GGCAATTACATCATGTATGCAAGAGCAACATCTGGG...TATGGGAATTGCTCTGATCATGCTAATGGCTGGATTTATTAAGATATGCAGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396136.6
3UTR-3UTR CCA 90 bp AAGGTAACTGGTCAATGCATATCAGCAAATGCATACCATAAAAGCCAAAGAATTCATTTTTGGCCTTGCTaGCTTGCGTCACATTATGAG +
Preference number: 2 (lower is better)
Translates to: KVTGQCISANAYHKSQRIHFWPC*LASHYE
Trigger: CTCATAATGTGACGCAAGCCAGCAAGGCCAAAAATG...AATTCTTTGGCTTTTATGGTATGCATTTGCTGATATGCATTGACCAGTTACCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR CAA 90 bp TTGGATCACCAAAAACCTCCTCCTCAGCATGTATCACAGCTGGAATaGTACATTTATTCACATGATTATCTGATATCTATCTCACCTACA +
Preference number: 2 (lower is better)
Translates to: LDHQKPPPQHVSQLE*YIYSHDYLISISPT
Trigger: TGTAGGTGAGATAGATATCAGATAATCATGTGAATAAATGTACAATTCCAGCTGTGATACATGCTGAGGAGGAGGTTTTTGGTGATCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR-3UTR GCA 90 bp AAGGTAACTGGTCAATGCATATCAGCAAATGCATACCATAAAAGCCAAAGAATTCCGAAATTTCATAGTTaGCAAGGACACCAATCCCAT +
Preference number: 2 (lower is better)
Translates to: KVTGQCISANAYHKSQRIPKFHS*QGHQSH
Trigger: ATGGGATTGGTGTCCTTGGCAACTATGAAATTTCGG...AATTCTTTGGCTTTTATGGTATGCATTTGCTGATATGCATTGACCAGTTACCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR-3UTR CCA 90 bp AAGGTAACTGGTCAATGCATATCAGCAAATGCATACCATAAAAGCCAAAGAATTAGCATTACAGAATCCTaGACCACTGAATACCACCAT +
Preference number: 2 (lower is better)
Translates to: KVTGQCISANAYHKSQRISITES*TTEYHH
Trigger: ATGGTGGTATTCAGTGGTCCAGGATTCTGTAATGCT...AATTCTTTGGCTTTTATGGTATGCATTTGCTGATATGCATTGACCAGTTACCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR CAA 90 bp GTTAAATACAATACTATGAGTTTCAATCTCTTGCAGATATTATCCTaGCTGATGCTAAAGTTATCTCAGCCTTGGCCAGTGGTAACTTCT +
Preference number: 2 (lower is better)
Translates to: VKYNTMSFNLLQILS*LMLKLSQPWPVVTS
Trigger: AGAAGTTACCACTGGCCAAGGCTGAGATAACTTTAGCATCAGCAAGGATAATATCTGCAAGAGATTGAAACTCATAGTATTGTATTTAAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR-3UTR CCA 90 bp AAGGTAACTGGTCAATGCATATCAGCAAATGCATACCATAAAAGCCAAAGAATTTGCAGGGAATTATTCTaGGCTTACAATTCCTTTTCT +
Preference number: 2 (lower is better)
Translates to: KVTGQCISANAYHKSQRICRELF*AYNSFS
Trigger: AGAAAAGGAATTGTAAGCCCAGAATAATTCCCTGCA...AATTCTTTGGCTTTTATGGTATGCATTTGCTGATATGCATTGACCAGTTACCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR CCA 72 bp AACTCTCTCGGGGCCGCTGACGCTGGGGTTGCTGAATaGGCTGTGGAGGTCTCCTCCTCTTTAAAGTGCCTG +
Preference number: 3 (lower is better)
Translates to: NSLGAADAGVAE*AVEVSSSLKCL
Trigger: CAGGCACTTTAAAGAGGAGGAGACCTCCACAGCCCATTCAGCAACCCCAGCGTCAGCGGCCCCGAGAGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396136.6
3UTR TCA 72 bp GCTGGTTTCTTTCCTTCCGCTAGACCCTCAGCTCCCTaGAGGCACAGACTGCAGTCCTTTGGGGGCTGTGAA +
Preference number: 3 (lower is better)
Translates to: AGFFPSARPSAP*RHRLQSFGGCE
Trigger: TTCACAGCCCCCAAAGGACTGCAGTCTGTGCCTTCAGGGAGCTGAGGGTCTAGCGGAAGGAAAGAAACCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR GCA 72 bp CTTCCGCTAGACCCTCAGCTCCCTGAAGGCACAGACTaGAGTCCTTTGGGGGCTGTGAAAAATTGCAGCAGG +
Preference number: 3 (lower is better)
Translates to: LPLDPQLPEGTD*SPLGAVKNCSR
Trigger: CCTGCTGCAATTTTTCACAGCCCCCAAAGGACTGCAGTCTGTGCCTTCAGGGAGCTGAGGGTCTAGCGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR GCA 72 bp AGGGTGATGGTTCGACCACTGAAGTGCCTACTCCACTaGACAGACCCTGTACTGGCACAAGTTGATGGGTCC +
Preference number: 3 (lower is better)
Translates to: RVMVRPLKCLLH*TDPVLAQVDGS
Trigger: GGACCCATCAACTTGTGCCAGTACAGGGTCTGTGCAGTGGAGTAGGCACTTCAGTGGTCGAACCATCACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396136.6
3UTR GCA 72 bp GATCCAGGTTGCAGGGTGATGGTTCGACCACTGAAGTaGCTACTCCACTGCACAGACCCTGTACTGGCACAA +
Preference number: 3 (lower is better)
Translates to: DPGCRVMVRPLK*LLHCTDPVLAQ
Trigger: TTGTGCCAGTACAGGGTCTGTGCAGTGGAGTAGGCACTTCAGTGGTCGAACCATCACCCTGCAACCTGGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396136.6
3UTR GCA 72 bp CGCACCCAGCCCTGCCAGGTACCCAAATCTTACCAGTaGAAACTACACCATTCTGTTGTGTTCCCACTGCTG +
Preference number: 3 (lower is better)
Translates to: RTQPCQVPKSYQ*KLHHSVVFPLL
Trigger: CAGCAGTGGGAACACAACAGAATGGTGTAGTTTGCACTGGTAAGATTTGGGTACCTGGCAGGGCTGGGTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR GCA 72 bp TTGGCTCTTCCCACTACCTACCTACCATGCTCGATATaGACTTCCTCTGAGCTACCAGGGCATCCTGTGTTT +
Preference number: 3 (lower is better)
Translates to: LALPTTYLPCSI*TSSELPGHPVF
Trigger: AAACACAGGATGCCCTGGTAGCTCAGAGGAAGTGCATATCGAGCATGGTAGGTAGGTAGTGGGAAGAGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR GCA 72 bp GAAGTCATCTTGGCTCTTCCCACTACCTACCTACCATaGTCGATATGCACTTCCTCTGAGCTACCAGGGCAT +
Preference number: 3 (lower is better)
Translates to: EVILALPTTYLP*SICTSSELPGH
Trigger: ATGCCCTGGTAGCTCAGAGGAAGTGCATATCGAGCATGGTAGGTAGGTAGTGGGAAGAGCCAAGATGACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR TCA 72 bp AACGTCCCACCCTCCTTTCTCAGTCCTATCTCTGCATaGTCAGCTCTTGGATCACCAAAAACCTCCTCCTCA +
Preference number: 3 (lower is better)
Translates to: NVPPSFLSPISA*SALGSPKTSSS
Trigger: TGAGGAGGAGGTTTTTGGTGATCCAAGAGCTGATCATGCAGAGATAGGACTGAGAAAGGAGGGTGGGACGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR TCA 72 bp CACTACCTACCTACCATGCTCGATATGCACTTCCTCTaGGCTACCAGGGCATCCTGTGTTTGTAGAGTTTCC +
Preference number: 3 (lower is better)
Translates to: HYLPTMLDMHFL*ATRASCVCRVS
Trigger: GGAAACTCTACAAACACAGGATGCCCTGGTAGCTCAGAGGAAGTGCATATCGAGCATGGTAGGTAGGTAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR CCA 72 bp CCCAATCCAGCCTACAAATCAAAGAACATCCCCAAATaGTTTACCCTTCTCCCGACCAAACCCTTTCCCCTG +
Preference number: 3 (lower is better)
Translates to: PNPAYKSKNIPK*FTLLPTKPFPL
Trigger: CAGGGGAAAGGGTTTGGTCGGGAGAAGGGTAAACCATTTGGGGATGTTCTTTGATTTGTAGGCTGGATTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461408.2
3UTR-3UTR CAA 90 bp GTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCGAGCCTCCTAGCCTTGCCTCCCACCCCCAAATaGGAATTTTCAGGCTTTAAA +
Preference number: 3 (lower is better)
Translates to: VHWQVMSPMLRWSSLLALPPTPK*EFSGFK
Trigger: TTTAAAGCCTGAAAATTCCAATTTGGGGGTGGGAGG...CAAGGCTAGGAGGCTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260408.8
ENST00000402627.5
3UTR-3UTR CAA 90 bp GCGTTTCACCATGAAACTGATGTTACGGATTCCGGAGAAGTCTGTGGTCTGGTACCTCCCACCCCCAAATaGGAATTTTCAGGCTTTAAA +
Preference number: 3 (lower is better)
Translates to: AFHHETDVTDSGEVCGLVPPTPK*EFSGFK
Trigger: TTTAAAGCCTGAAAATTCCAATTTGGGGGTGGGAGG...TACCAGACCACAGACTTCTCCGGAATCCGTAACATCAGTTTCATGGTGAAACGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396136.6
3UTR-3UTR CAA 90 bp AAAGCATTACAGAATCCTGGACCACTGAATACCACCATTCTCTGTTATCCTGAGGTGATGTCTCCAATGTaGAGGTGGTCGAGCCTCCTA +
Preference number: 3 (lower is better)
Translates to: KALQNPGPLNTTILCYPEVMSPM*RWSSLL
Trigger: TAGGAGGCTCGACCACCTCAACATTGGAGACATCAC...CTCAGGATAACAGAGAATGGTGGTATTCAGTGGTCCAGGATTCTGTAATGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260408.8
ENST00000402627.5
3UTR TCA 72 bp ACCATTCTGTTGTGTTCCCACTGCTGGTTTAGGATTTaGCTTCCCTGGGTCTGCCCAATCAATAGTACTCCT +
Preference number: 3 (lower is better)
Translates to: TILLCSHCWFRI*LPWVCPINSTP
Trigger: AGGAGTACTATTGATTGGGCAGACCCAGGGAAGTCAAATCCTAAACCAGCAGTGGGAACACAACAGAATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR TCA 72 bp ACAGAATGTTTTCAAGAACACCAACACACCCTCCTGTaGTCTCTCTCCAAACACAGGACACAGGAAGAACCG +
Preference number: 3 (lower is better)
Translates to: TECFQEHQHTLL*SLSKHRTQEEP
Trigger: CGGTTCTTCCTGTGTCCTGTGTTTGGAGAGAGATCACAGGAGGGTGTGTTGGTGTTCTTGAAAACATTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461408.2
3UTR CCA 72 bp CTCCTTTCTCAGTCCTATCTCTGCATGATCAGCTCTTaGATCACCAAAAACCTCCTCCTCAGCATGTATCAC +
Preference number: 3 (lower is better)
Translates to: LLSQSYLCMISS*ITKNLLLSMYH
Trigger: GTGATACATGCTGAGGAGGAGGTTTTTGGTGATCCAAGAGCTGATCATGCAGAGATAGGACTGAGAAAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR CCA 72 bp GCACACTTGTGTATGCCTATTACAGTCTGTGAAGTTTaGTTTAGGGTCAGATGCTGGGCAGAGAGCTGTGAA +
Preference number: 3 (lower is better)
Translates to: AHLCMPITVCEV*FRVRCWAESCE
Trigger: TTCACAGCTCTCTGCCCAGCATCTGACCCTAAACCAAACTTCACAGACTGTAATAGGCATACACAAGTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396136.6
3UTR-3UTR CAA 90 bp TTCTTATCATCTAGCCAAGGCCCTGGCACAATCAAGTGCCTAAGAAGTATCTGTTTTGGCCTTGCTGGCTaGCGTCACATTATGAGAATG +
Preference number: 3 (lower is better)
Translates to: FLSSSQGPGTIKCLRSICFGLAG*RHIMRM
Trigger: CATTCTCATAATGTGACGCAAGCCAGCAAGGCCAAA...ACAGATACTTCTTAGGCACTTGATTGTGCCAGGGCCTTGGCTAGATGATAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR-3UTR CAA 90 bp TTCTTATCATCTAGCCAAGGCCCTGGCACAATCAAGTGCCTAAGAAGTATCTGTCCTCCCACCCCCAAATaGGAATTTTCAGGCTTTAAA +
Preference number: 3 (lower is better)
Translates to: FLSSSQGPGTIKCLRSICPPTPK*EFSGFK
Trigger: TTTAAAGCCTGAAAATTCCAATTTGGGGGTGGGAGG...ACAGATACTTCTTAGGCACTTGATTGTGCCAGGGCCTTGGCTAGATGATAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR-3UTR CAA 90 bp TTCTTATCATCTAGCCAAGGCCCTGGCACAATCAAGTGCCTAAGAAGTATCTGTACCCACTTCCAACCTTaGCACAGTCCAAAAACAAAG +
Preference number: 3 (lower is better)
Translates to: FLSSSQGPGTIKCLRSICTHFQP*HSPKTK
Trigger: CTTTGTTTTTGGACTGTGCAAAGGTTGGAAGTGGGT...ACAGATACTTCTTAGGCACTTGATTGTGCCAGGGCCTTGGCTAGATGATAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR TCA 72 bp GGTGGTATATGTACTTCCATTAGGAGGCACAAAATCTaGTTGCTCTCACTTTGTGAGGTTAGCAGTCACTGG +
Preference number: 3 (lower is better)
Translates to: GGICTSIRRHKI*LLSLCEVSSHW
Trigger: CCAGTGACTGCTAACCTCACAAAGTGAGAGCAATCAGATTTTGTGCCTCCTAATGGAAGTACATATACCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR TCA 72 bp TTGTTGGGCCAATATCCTAAGGAGAATAACCAAGTATaGCACCTGCCAAAGTACAAGCCAGCTCTTCAGCAA +
Preference number: 3 (lower is better)
Translates to: LLGQYPKENNQV*HLPKYKPALQQ
Trigger: TTGCTGAAGAGCTGGCTTGTACTTTGGCAGGTGTCATACTTGGTTATTCTCCTTAGGATATTGGCCCAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR CCA 72 bp ATTACAGTCTGTGAAGTTTGGTTTAGGGTCAGATGCTaGGCAGAGAGCTGTGAAGCCATTACATATTCCTTC +
Preference number: 3 (lower is better)
Translates to: ITVCEVWFRVRC*AESCEAITYSF
Trigger: GAAGGAATATGTAATGGCTTCACAGCTCTCTGCCCAGCATCTGACCCTAAACCAAACTTCACAGACTGTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396136.6
3UTR-3UTR CAA 90 bp TTCTTATCATCTAGCCAAGGCCCTGGCACAATCAAGTGCCTAAGAAGTATCTGTAGTAGTTTGCTCCGCTaGGACAAATCAGATTTCACT +
Preference number: 3 (lower is better)
Translates to: FLSSSQGPGTIKCLRSICSSLLR*DKSDFT
Trigger: AGTGAAATCTGATTTGTCCAAGCGGAGCAAACTACT...ACAGATACTTCTTAGGCACTTGATTGTGCCAGGGCCTTGGCTAGATGATAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR TCA 72 bp ACTGCCTGTGTAAAGCATTACAGAATCCTGGACCACTaGATACCACCATTCTCTGTTATCCTGAGTATGTCA +
Preference number: 3 (lower is better)
Translates to: TACVKHYRILDH*IPPFSVILSMS
Trigger: TGACATACTCAGGATAACAGAGAATGGTGGTATTCAGTGGTCCAGGATTCTGTAATGCTTTACACAGGCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260408.8
ENST00000402627.5
3UTR TCA 72 bp ATAATTAGGTCTTACTACAGGGACAAATACAAGGACTaGGGGTCGAGTAGTTTGCTCCGCTTGGACAAATCA +
Preference number: 3 (lower is better)
Translates to: IIRSYYRDKYKD*GSSSLLRLDKS
Trigger: TGATTTGTCCAAGCGGAGCAAACTACTCGACCCTCAGTCCTTGTATTTGTCCCTGTAGTAAGACCTAATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR TCA 72 bp TCCAACGTGGGACACACAGGCTTAATGTGGATAAGCTaGCCATACTCCTTGACATGTTTAACAGAGAACAAA +
Preference number: 3 (lower is better)
Translates to: SNVGHTGLMWIS*PYSLTCLTENK
Trigger: TTTGTTCTCTGTTAAACATGTCAAGGAGTATGGTCAGCTTATCCACATTAAGCCTGTGTGTCCCACGTTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR TCA 72 bp GACAATCCACTAACTACACTGTACATCTACTCCACCTaGAAGTTTAACGAAACTCTTCAAGTTGGGTCACCC +
Preference number: 3 (lower is better)
Translates to: DNPLTTLYIYST*KFNETLQVGSP
Trigger: GGGTGACCCAACTTGAAGAGTTTCGTTAAACTTTCAGGTGGAGTAGATGTACAGTGTAGTTAGTGGATTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461408.2
3UTR GCA 72 bp GTATATGTACTTCCATTAGGAGGCACAAAATCTGATTaGTCTCACTTTGTGAGGTTAGCAGTCACTGGCGAT +
Preference number: 3 (lower is better)
Translates to: VYVLPLGGTKSD*SHFVRLAVTGD
Trigger: ATCGCCAGTGACTGCTAACCTCACAAAGTGAGAGCAATCAGATTTTGTGCCTCCTAATGGAAGTACATATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR GCA 72 bp GGCTTCATCATGATGAGATGTGACTTTTGGCAGAACTaGTTCATAGGTGGTATATGTACTTCCATTAGGAGG +
Preference number: 3 (lower is better)
Translates to: GFIMMRCDFWQN*FIGGICTSIRR
Trigger: CCTCCTAATGGAAGTACATATACCACCTATGAAGCAGTTCTGCCAAAAGTCACATCTCATCATGATGAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR-3UTR CAA 90 bp AAAGCATTACAGAATCCTGGACCACTGAATACCACCATTCTCTGTTATCCTGAGTGTGGTAAAAGTTTATaGAGAGCCAAGTTTGCCTGC +
Preference number: 3 (lower is better)
Translates to: KALQNPGPLNTTILCYPECGKSL*RAKFAC
Trigger: GCAGGCAAACTTGGCTCTCAATAAACTTTTACCACA...CTCAGGATAACAGAGAATGGTGGTATTCAGTGGTCCAGGATTCTGTAATGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260408.8
ENST00000402627.5
3UTR TCA 72 bp CCAGTGGTAACTTCTAAGGTGCCTCCTGAATCTTTCTaGTCTGGTACAAAACAATGTTTCCTAGGTTCTTCT +
Preference number: 3 (lower is better)
Translates to: PVVTSKVPPESF*SGTKQCFLGSS
Trigger: AGAAGAACCTAGGAAACATTGTTTTGTACCAGATCAGAAAGATTCAGGAGGCACCTTAGAAGTTACCACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR CCA 72 bp CTGTTTCCCAGGTTTCAGTTTGCATTTTCTTCCCTCTaGTTGATTTGCATCGAAGCAGCATTCATCTTTACA +
Preference number: 3 (lower is better)
Translates to: LFPRFQFAFSSL*LICIEAAFIFT
Trigger: TGTAAAGATGAATGCTGCTTCGATGCAAATCAACCAGAGGGAAGAAAATGCAAACTGAAACCTGGGAAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396136.6
3UTR-3UTR CAA 90 bp TTGCCCATTAATGCACACTTGTGTATGCCTATTACAGTCTGTGAAGTTTGGTTTTCTCCACACCAATATTaGGGAAACGGAAAGGATTTG +
Preference number: 3 (lower is better)
Translates to: LPINAHLCMPITVCEVWFSPHQY*GNGKDL
Trigger: CAAATCCTTTCCGTTTCCCAAATATTGGTGTGGAGA...AAACCAAACTTCACAGACTGTAATAGGCATACACAAGTGTGCATTAATGGGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396136.6
3UTR TCA 72 bp TTAGGAGGAGGCAACTTTGGATTACTACTTGGAGTATaGACACTGCATATCTTAATAAATCCAGCCATTAGC +
Preference number: 3 (lower is better)
Translates to: LGGGNFGLLLGV*TLHILINPAIS
Trigger: GCTAATGGCTGGATTTATTAAGATATGCAGTGTTCATACTCCAAGTAGTAATCCAAAGTTGCCTCCTCCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396136.6
3UTR GCA 72 bp ATACATTTCTTCTCCTATCAGGAGTTGTTACTTACATaGCCCAAAGCTAAGTTATGCCTTTCCCATTTTTGC +
Preference number: 3 (lower is better)
Translates to: IHFFSYQELLLT*PKAKLCLSHFC
Trigger: GCAAAAATGGGAAAGGCATAACTTAGCTTTGGGGCATGTAAGTAACAACTCCTGATAGGAGAAGAAATGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR CCA 72 bp AAGTGGTTTAGGAGGAGGCAACTTTGGATTACTACTTaGAGTATGAACACTGCATATCTTAATAAATCCAGC +
Preference number: 3 (lower is better)
Translates to: KWFRRRQLWITT*SMNTAYLNKSS
Trigger: GCTGGATTTATTAAGATATGCAGTGTTCATACTCCAAGTAGTAATCCAAAGTTGCCTCCTCCTAAACCACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396136.6
3UTR-3UTR CAA 90 bp TATGTCACAAGCTTCAATTTTTGTAATGCCCCTTCTATTTCCTGCATAGCAATAATTTGGAATGGGACATaGTGCTGTTTCACCTTCAAT +
Preference number: 3 (lower is better)
Translates to: YVTSFNFCNAPSISCIAIIWNGT*CCFTFN
Trigger: ATTGAAGGTGAAACAGCACAATGTCCCATTCCAAAT...TATTGCTATGCAGGAAATAGAAGGGGCATTACAAAAATTGAAGCTTGTGACATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR-3UTR CAA 90 bp AAGGTAACTGGTCAATGCATATCAGCAAATGCATACCATAAAAGCCAAAGAATTTTATATTACCACATCTaGATTCGCAGTGGAAAGAGT +
Preference number: 3 (lower is better)
Translates to: KVTGQCISANAYHKSQRILYYHI*IRSGKS
Trigger: ACTCTTTCCACTGCGAATCAAGATGTGGTAATATAA...AATTCTTTGGCTTTTATGGTATGCATTTGCTGATATGCATTGACCAGTTACCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR-3UTR CAA 90 bp AAGGTAACTGGTCAATGCATATCAGCAAATGCATACCATAAAAGCCAAAGAATTTCCTTTAACCCATCGTaGTCTTTTCTCTTTGCATTT +
Preference number: 3 (lower is better)
Translates to: KVTGQCISANAYHKSQRISFNPS*SFLFAF
Trigger: AAATGCAAAGAGAAAAGACAACGATGGGTTAAAGGA...AATTCTTTGGCTTTTATGGTATGCATTTGCTGATATGCATTGACCAGTTACCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR TCA 72 bp ATGGTACTTAAGAGACCACAATTAGGGCACTCAATTTaGCTTGCATTTGAATTATGTCTAAAGCTAATCAAC +
Preference number: 3 (lower is better)
Translates to: MVLKRPQLGHSI*LAFELCLKLIN
Trigger: GTTGATTAGCTTTAGACATAATTCAAATGCAAGTCAAATTGAGTGCCCTAATTGTGGTCTCTTAAGTACCAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR GCA 90 bp GTTTACCCTTCTCCCGACCAAACCCTTTCCCCTGGGCGACAGAATGTTTTCAAGAACACCATCTTCCGCTaGCGCTGCCGCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: VYPSPDQTLSPGRQNVFKNTIFR*RCRRRR
Trigger: GCGGCGGCGGCGGCAGCGGCAGCGGAAGATGGTGTT...CTTGAAAACATTCTGTCGCCCAGGGGAAAGGGTTTGGTCGGGAGAAGGGTAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461408.2
CDS-3UTR GCA 90 bp TCTCCCGACCAAACCCTTTCCCCTGGGCGACAGAATGTTTTCAAGAACACCAACGCGGGTGATGACTGCTaGCACTCCACGGGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: SPDQTLSPGRQNVFKNTNAGDDC*HSTGGP
Trigger: GGGGCCGCCCGTGGAGTGGCAGCAGTCATCACCCGC...GTTGGTGTTCTTGAAAACATTCTGTCGCCCAGGGGAAAGGGTTTGGTCGGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461408.2
CDS-3UTR TCA 90 bp AGGCCACTAGTCTCAGATAAGCGGGTGATGACTGCTGCCACTCCACGGGCGGCCCAACACACCCTCCTGTaGTCTCTCTCCAAACACAGG +
Preference number: 4 (lower is better)
Translates to: RPLVSDKRVMTAATPRAAQHTLL*SLSKHR
Trigger: CCTGTGTTTGGAGAGAGATCACAGGAGGGTGTGTTG...GGCCGCCCGTGGAGTGGCAGCAGTCATCACCCGCTTATCTGAGACTAGTGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461408.2
CDS-3UTR CCA 90 bp GTTTACCCTTCTCCCGACCAAACCCTTTCCCCTGGGCGACAGAATGTTTTCAAGGGCCCCTCTGCAGAATaGGGTCGGTCAGGACCGGCG +
Preference number: 4 (lower is better)
Translates to: VYPSPDQTLSPGRQNVFKGPSAE*GRSGPA
Trigger: CGCCGGTCCTGACCGACCCCATTCTGCAGAGGGGCC...CTTGAAAACATTCTGTCGCCCAGGGGAAAGGGTTTGGTCGGGAGAAGGGTAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000461408.2
CDS-3UTR GCA 90 bp AGGTATGTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCGAGCCTCCTAAACACCATCTTCCGCTaGCGCTGCCGCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: RYVHWQVMSPMLRWSSLLNTIFR*RCRRRR
Trigger: GCGGCGGCGGCGGCAGCGGCAGCGGAAGATGGTGTT...TAGGAGGCTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTACATACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260408.8
ENST00000402627.5
CDS-3UTR TCA 90 bp GTCACCCAGGGACCGAACTTCTACTCTAAGAGACCCAATCCAGCCTACAAATCATCCGGAGGGAGAAGCTaGAGGGGCTTGGTCCGGAGC +
Preference number: 4 (lower is better)
Translates to: VTQGPNFYSKRPNPAYKSSGGRS*RGLVRS
Trigger: GCTCCGGACCAAGCCCCTTCAGCTTCTCCCTCCGGA...TGATTTGTAGGCTGGATTGGGTCTCTTAGAGTAGAAGTTCGGTCCCTGGGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461408.2
CDS-3UTR CCA 90 bp AGGCCACTAGTCTCAGATAAGCGGGTGATGACTGCTGCCACTCCACGGGCGGCCAAGAACATCCCCAAATaGTTTACCCTTCTCCCGACC +
Preference number: 4 (lower is better)
Translates to: RPLVSDKRVMTAATPRAAKNIPK*FTLLPT
Trigger: GGTCGGGAGAAGGGTAAACCATTTGGGGATGTTCTT...GGCCGCCCGTGGAGTGGCAGCAGTCATCACCCGCTTATCTGAGACTAGTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461408.2
CDS-3UTR GCA 90 bp CCGAACTTCTACTCTAAGAGACCCAATCCAGCCTACAAATCAAAGAACATCCCCAACTTCCCACGAGTCTaGGCGGCGGGTCTCGGCGGC +
Preference number: 4 (lower is better)
Translates to: PNFYSKRPNPAYKSKNIPNFPRV*AAGLGG
Trigger: GCCGCCGAGACCCGCCGCGCAGACTCGTGGGAAGTT...GGGGATGTTCTTTGATTTGTAGGCTGGATTGGGTCTCTTAGAGTAGAAGTTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461408.2
CDS-3UTR CCA 90 bp ACTACAGGGACAAATACAAGGACTGAGGGTCGAGTAGTTTGCTCCGCTTGGACAGAAGCTGAAGGGGCTTaGTCCGGAGCCTCCACGGGA +
Preference number: 4 (lower is better)
Translates to: TTGTNTRTEGRVVCSAWTEAEGA*SGASTG
Trigger: TCCCGTGGAGGCTCCGGACCAAGCCCCTTCAGCTTC...TGTCCAAGCGGAGCAAACTACTCGACCCTCAGTCCTTGTATTTGTCCCTGTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CCA 90 bp GTTGCAAGGGGATCCAGGTTGCAGGGTGATGGTTCGACCACTGAAGTGCCTACTGCACAGACCCTGTACTaGCACAAGTTGATGGGTCCA +
Preference number: 4 (lower is better)
Translates to: VARGSRLQGDGSTTEVPTAQTLY*HKLMGP
Trigger: TGGACCCATCAACTTGTGCCAGTACAGGGTCTGTGC...AGTAGGCACTTCAGTGGTCGAACCATCACCCTGCAACCTGGATCCCCTTGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR CCA 90 bp ACTACAGGGACAAATACAAGGACTGAGGGTCGAGTAGTTTGCTCCGCTTGGACACAGGCTGGAGTGCAATaGCGCAATCGCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: TTGTNTRTEGRVVCSAWTQAGVQ*RNRGSL
Trigger: CAGTGAGCCGCGATTGCGCCATTGCACTCCAGCCTG...TGTCCAAGCGGAGCAAACTACTCGACCCTCAGTCCTTGTATTTGTCCCTGTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR TCA 90 bp GATCCAGGTTGCAGGGTGATGGTTCGACCACTGAAGTGCCTACTCCACTGCACATTCCCTTGCACAGTCTaGATCATCCCGACACTTCTC +
Preference number: 4 (lower is better)
Translates to: DPGCRVMVRPLKCLLHCTFPCTV*IIPTLL
Trigger: GAGAAGTGTCGGGATGATTCAGACTGTGCAAGGGAA...TGTGCAGTGGAGTAGGCACTTCAGTGGTCGAACCATCACCCTGCAACCTGGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR GCA 90 bp AATGCAGCAACGAAGAACAGGGAACACGGGGCACATAATAATATTCTAAGACTTAACACCATCTTCCGCTaGCGCTGCCGCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: NAATKNREHGAHNNILRLNTIFR*RCRRRR
Trigger: GCGGCGGCGGCGGCAGCGGCAGCGGAAGATGGTGTT...AAGTCTTAGAATATTATTATGTGCCCCGTGTTCCCTGTTCTTCGTTGCTGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260408.8
ENST00000402627.5
ENST00000561288.1
3UTR CAA 72 bp GACCCTCAGCTCCCTGAAGGCACAGACTGCAGTCCTTaGGGGGCTGTGAAAAATTGCAGCAGGTTGATAAGT +
Preference number: 4 (lower is better)
Translates to: DPQLPEGTDCSP*GAVKNCSRLIS
Trigger: ACTTATCAACCTGCTGCAATTTTTCACAGCCCCCAAAGGACTGCAGTCTGTGCCTTCAGGGAGCTGAGGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR TCA 90 bp CTGCATATAACAAGGTATGTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCCGGAGGGAGAAGCTaGAGGGGCTTGGTCCGGAGC +
Preference number: 4 (lower is better)
Translates to: LHITRYVHWQVMSPMLRWSGGRS*RGLVRS
Trigger: GCTCCGGACCAAGCCCCTTCAGCTTCTCCCTCCGGA...CCACCTCAACATTGGAGACATCACTTGCCAATGTACATACCTTGTTATATGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR TCA 90 bp GTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCGAGCCTCCTAGCCTTGTGCTGGTTTAGGATTTaGCTTCCCTGGGTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: VHWQVMSPMLRWSSLLALCWFRI*LPWVCP
Trigger: TGGGCAGACCCAGGGAAGTCAAATCCTAAACCAGCA...CAAGGCTAGGAGGCTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR TCA 90 bp ACTACAGGGACAAATACAAGGACTGAGGGTCGAGTAGTTTGCTCCGCTTGGACAACAGACGCCCAGGTCTaGAAAGCGAAGCGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: TTGTNTRTEGRVVCSAWTTDAQV*KAKRLS
Trigger: TGAAAGGCGCTTCGCTTTTCAGACCTGGGCGTCTGT...TGTCCAAGCGGAGCAAACTACTCGACCCTCAGTCCTTGTATTTGTCCCTGTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CCA 90 bp GTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCGAGCCTCCTAGCCTTGTTTAGGGTCAGATGCTaGGCAGAGAGCTGTGAAGCC +
Preference number: 4 (lower is better)
Translates to: VHWQVMSPMLRWSSLLALFRVRC*AESCEA
Trigger: GGCTTCACAGCTCTCTGCCCAGCATCTGACCCTAAA...CAAGGCTAGGAGGCTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR TCA 90 bp AATGCAGCAACGAAGAACAGGGAACACGGGGCACATAATAATATTCTAAGACTTTCCGGAGGGAGAAGCTaGAGGGGCTTGGTCCGGAGC +
Preference number: 4 (lower is better)
Translates to: NAATKNREHGAHNNILRLSGGRS*RGLVRS
Trigger: GCTCCGGACCAAGCCCCTTCAGCTTCTCCCTCCGGA...AAGTCTTAGAATATTATTATGTGCCCCGTGTTCCCTGTTCTTCGTTGCTGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260408.8
ENST00000561288.1
CDS-3UTR TCA 90 bp CCAGGTTGCAGGGTGATGGTTCGACCACTGAAGTGCCTACTCCACTGCACAGACTGTACTGGCACAAGTTaGTGGGTCCATTTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: PGCRVMVRPLKCLLHCTDCTGTS*WVHFLH
Trigger: ATGAAGAAAATGGACCCATCAACTTGTGCCAGTACA...GTCTGTGCAGTGGAGTAGGCACTTCAGTGGTCGAACCATCACCCTGCAACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR TCA 90 bp GATCCAGGTTGCAGGGTGATGGTTCGACCACTGAAGTGCCTACTCCACTGCACACTAATCTGCACCGCATaGAAACATCACAGTAACCTC +
Preference number: 4 (lower is better)
Translates to: DPGCRVMVRPLKCLLHCTLICTA*KHHSNL
Trigger: GAGGTTACTGTGATGTTTTCATGCGGTGCAGATTAG...TGTGCAGTGGAGTAGGCACTTCAGTGGTCGAACCATCACCCTGCAACCTGGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR TCA 90 bp ACTACAGGGACAAATACAAGGACTGAGGGTCGAGTAGTTTGCTCCGCTTGGACACTGCATTATCAGCTGTaGCAACGTCCCACCCTCCTT +
Preference number: 4 (lower is better)
Translates to: TTGTNTRTEGRVVCSAWTLHYQL*QRPTLL
Trigger: AAGGAGGGTGGGACGTTGTCACAGCTGATAATGCAG...TGTCCAAGCGGAGCAAACTACTCGACCCTCAGTCCTTGTATTTGTCCCTGTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR TCA 90 bp GTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCGAGCCTCCTAGCCTTGCAGCAGGTTGATAAGTaGATGGGAGCTGAAGTAGCC +
Preference number: 4 (lower is better)
Translates to: VHWQVMSPMLRWSSLLALQQVDK*MGAEVA
Trigger: GGCTACTTCAGCTCCCATTCACTTATCAACCTGCTG...CAAGGCTAGGAGGCTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR GCA 90 bp GTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCGAGCCTCCTAGCCTTGTGGTTTAGGGTCAGATaGTGGGCAGAGAGCTGTGAA +
Preference number: 4 (lower is better)
Translates to: VHWQVMSPMLRWSSLLALWFRVR*WAESCE
Trigger: TTCACAGCTCTCTGCCCAGCATCTGACCCTAAACCA...CAAGGCTAGGAGGCTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR GCA 90 bp ACTACAGGGACAAATACAAGGACTGAGGGTCGAGTAGTTTGCTCCGCTTGGACAGTTCGACCACTGAAGTaGCTACTCCACTGCACAGAC +
Preference number: 4 (lower is better)
Translates to: TTGTNTRTEGRVVCSAWTVRPLK*LLHCTD
Trigger: GTCTGTGCAGTGGAGTAGGCACTTCAGTGGTCGAAC...TGTCCAAGCGGAGCAAACTACTCGACCCTCAGTCCTTGTATTTGTCCCTGTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR GCA 90 bp AAAGCATTACAGAATCCTGGACCACTGAATACCACCATTCTCTGTTATCCTGAGGCAATCGCGGCTCACTaGAGCCTCTGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: KALQNPGPLNTTILCYPEAIAAH*SLCLLG
Trigger: ACCCAGGAGGCAGAGGCTGCAGTGAGCCGCGATTGC...CTCAGGATAACAGAGAATGGTGGTATTCAGTGGTCCAGGATTCTGTAATGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR GCA 90 bp AGCAAGAATAAAATGATGCAGCTGGTCCTAGAACACACCGGAAATAAAAATCGTCACGGGCGGCCCCTCTaGAGAATGGGGTCGGTCAGG +
Preference number: 4 (lower is better)
Translates to: SKNKMMQLVLEHTGNKNRHGRPL*RMGSVR
Trigger: CCTGACCGACCCCATTCTGCAGAGGGGCCGCCCGTG...ACGATTTTTATTTCCGGTGTGTTCTAGGACCAGCTGCATCATTTTATTCTTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000461408.2
CDS-3UTR CCA 90 bp AATGCAGCAACGAAGAACAGGGAACACGGGGCACATAATAATATTCTAAGACTTAGCCGGGACCTCCCCTaGCAGGAGAAACGGCGAAGC +
Preference number: 4 (lower is better)
Translates to: NAATKNREHGAHNNILRLSRDLP*QEKRRS
Trigger: GCTTCGCCGTTTCTCCTGCCAGGGGAGGTCCCGGCT...AAGTCTTAGAATATTATTATGTGCCCCGTGTTCCCTGTTCTTCGTTGCTGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260408.8
ENST00000561288.1
CDS-3UTR CCA 90 bp ATGTCAGATGAAAAAGGCTCCTCTAACAGAGAGTCTCCCGCACATAATCCTTTTGAAGCTGAAGGGGCTTaGTCCGGAGCCTCCACGGGA +
Preference number: 4 (lower is better)
Translates to: MSDEKGSSNRESPAHNPFEAEGA*SGASTG
Trigger: TCCCGTGGAGGCTCCGGACCAAGCCCCTTCAGCTTC...AAAAGGATTATGTGCGGGAGACTCTCTGTTAGAGGAGCCTTTTTCATCTGACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000461408.2
CDS-3UTR CCA 90 bp CCAGGTTGCAGGGTGATGGTTCGACCACTGAAGTGCCTACTCCACTGCACAGACAGGAGGAGGCAACTTTaGATTACTACTTGGAGTATG +
Preference number: 4 (lower is better)
Translates to: PGCRVMVRPLKCLLHCTDRRRQL*ITTWSM
Trigger: CATACTCCAAGTAGTAATCCAAAGTTGCCTCCTCCT...GTCTGTGCAGTGGAGTAGGCACTTCAGTGGTCGAACCATCACCCTGCAACCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR CCA 90 bp ATCTCGGTCTGTGAAGACATAGGCCAAACAGTAGTCATCATGATTCTGCTCAGAGCTGGGGTTGCTGAATaGGCTGTGGAGGTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: ISVCEDIGQTVVIMILLRAGVAE*AVEVSS
Trigger: GGAGGAGACCTCCACAGCCCATTCAGCAACCCCAGC...TCTGAGCAGAATCATGATGACTACTGTTTGGCCTATGTCTTCACAGACCGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR CCA 90 bp GTCACCCAGGGACCGAACTTCTACTCTAAGAGACCCAATCCAGCCTACAAATCACGAAACTCTTCAAGTTaGGTCACCCAGGGACCGAAC +
Preference number: 4 (lower is better)
Translates to: VTQGPNFYSKRPNPAYKSRNSSS*VTQGPN
Trigger: GTTCGGTCCCTGGGTGACCCAACTTGAAGAGTTTCG...TGATTTGTAGGCTGGATTGGGTCTCTTAGAGTAGAAGTTCGGTCCCTGGGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461408.2
CDS-3UTR TCA 90 bp AAATCGTTGCAAGGGGATCCAGGTTGCAGGGTGATGGTTCGACCACTGAAGTGCTTTCTTCCCTCTGGTTaGTTTGCATCGAAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: KSLQGDPGCRVMVRPLKCFLPSG*FASKQH
Trigger: ATGCTGCTTCGATGCAAATCAACCAGAGGGAAGAAA...GCACTTCAGTGGTCGAACCATCACCCTGCAACCTGGATCCCCTTGCAACGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR TCA 90 bp GTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCGAGCCTCCTAGCCTTGCTGGGCAGAGAGCTGTaGAGCCATTACATATTCCTT +
Preference number: 4 (lower is better)
Translates to: VHWQVMSPMLRWSSLLALLGREL*SHYIFL
Trigger: AAGGAATATGTAATGGCTTCACAGCTCTCTGCCCAG...CAAGGCTAGGAGGCTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR TCA 90 bp AGGTATGTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCGAGCCTCCTAGATATGCACTTCCTCTaGGCTACCAGGGCATCCTGT +
Preference number: 4 (lower is better)
Translates to: RYVHWQVMSPMLRWSSLLDMHFL*ATRASC
Trigger: ACAGGATGCCCTGGTAGCTCAGAGGAAGTGCATATC...TAGGAGGCTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTACATACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR TCA 90 bp GTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCGAGCCTCCTAGCCTTGATTTATCTCCAGGTATaGCGGAAGGAGGTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: VHWQVMSPMLRWSSLLALIYLQV*RKEVVL
Trigger: CAGCACAACCTCCTTCCGTCATACCTGGAGATAAAT...CAAGGCTAGGAGGCTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR GCA 90 bp AAGGTAACTGGTCAATGCATATCAGCAAATGCATACCATAAAAGCCAAAGAATTAACACCATCTTCCGCTaGCGCTGCCGCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: KVTGQCISANAYHKSQRINTIFR*RCRRRR
Trigger: GCGGCGGCGGCGGCAGCGGCAGCGGAAGATGGTGTT...AATTCTTTGGCTTTTATGGTATGCATTTGCTGATATGCATTGACCAGTTACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR GCA 90 bp GTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCGAGCCTCCTAGCCTTGGACCTTGACTTGGACTaGACTGTTTCCCAGGTTTCA +
Preference number: 4 (lower is better)
Translates to: VHWQVMSPMLRWSSLLALDLDLD*TVSQVS
Trigger: TGAAACCTGGGAAACAGTGCAGTCCAAGTCAAGGTC...CAAGGCTAGGAGGCTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR GCA 90 bp TCTCCTGGTGTGCACTCTGTTCCAGAATCATGTGGGGATCCAAAGTTATGTCCAAAGTGCCTACTCCACTaGACAGACCCTGTACTGGCA +
Preference number: 4 (lower is better)
Translates to: SPGVHSVPESCGDPKLCPKCLLH*TDPVLA
Trigger: TGCCAGTACAGGGTCTGTGCAGTGGAGTAGGCACTT...TGGACATAACTTTGGATCCCCACATGATTCTGGAACAGAGTGCACACCAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR GCA 90 bp TATAACAAGGTATGTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCGAGTCACCCAGGCTGGAGTaGAATGGCGCAATCGCGGCT +
Preference number: 4 (lower is better)
Translates to: YNKVCTLASDVSNVEVVESPRLE*NGAIAA
Trigger: AGCCGCGATTGCGCCATTGCACTCCAGCCTGGGTGA...CTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTACATACCTTGTTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR GCA 90 bp ACTACAGGGACAAATACAAGGACTGAGGGTCGAGTAGTTTGCTCCGCTTGGACAAGGGACCCAATGGCCTaGTTGCTAAGATTGCTGGAT +
Preference number: 4 (lower is better)
Translates to: TTGTNTRTEGRVVCSAWTRDPMA*LLRLLD
Trigger: ATCCAGCAATCTTAGCAAGCAGGCCATTGGGTCCCT...TGTCCAAGCGGAGCAAACTACTCGACCCTCAGTCCTTGTATTTGTCCCTGTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CCA 90 bp AGCAAGAATAAAATGATGCAGCTGGTCCTAGAACACACCGGAAATAAAAATCGTAGCCGGGACCTCCCCTaGCAGGAGAAACGGCGAAGC +
Preference number: 4 (lower is better)
Translates to: SKNKMMQLVLEHTGNKNRSRDLP*QEKRRS
Trigger: GCTTCGCCGTTTCTCCTGCCAGGGGAGGTCCCGGCT...ACGATTTTTATTTCCGGTGTGTTCTAGGACCAGCTGCATCATTTTATTCTTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000461408.2
CDS-3UTR CCA 90 bp AGGTATGTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCGAGCCTCCTATGCCTCCCGAGTAGCTaGGATTACAAGCATGTGCCA +
Preference number: 4 (lower is better)
Translates to: RYVHWQVMSPMLRWSSLLCLPSS*DYKHVP
Trigger: TGGCACATGCTTGTAATCCCAGCTACTCGGGAGGCA...TAGGAGGCTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTACATACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CCA 90 bp AGGTATGTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCGAGCCTCCTAGCACAGCAGGTCACATaGACACCTCATTCATCCTGG +
Preference number: 4 (lower is better)
Translates to: RYVHWQVMSPMLRWSSLLAQQVT*TPHSSW
Trigger: CCAGGATGAATGAGGTGTCCATGTGACCTGCTGTGC...TAGGAGGCTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTACATACCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR CAA 72 bp GCCTACTCCACTGCACAGACCCTGTACTGGCACAAGTaGATGGGTCCATTTTCTTCATACAGCATACATGGC +
Preference number: 4 (lower is better)
Translates to: AYSTAQTLYWHK*MGPFSSYSIHG
Trigger: GCCATGTATGCTGTATGAAGAAAATGGACCCATCAACTTGTGCCAGTACAGGGTCTGTGCAGTGGAGTAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396136.6
3UTR CAA 72 bp ACAGTAACCTCTAAAATCGTTGCAAGGGGATCCAGGTaGCAGGGTGATGGTTCGACCACTGAAGTGCCTACT +
Preference number: 4 (lower is better)
Translates to: TVTSKIVARGSR*QGDGSTTEVPT
Trigger: AGTAGGCACTTCAGTGGTCGAACCATCACCCTGCAACCTGGATCCCCTTGCAACGATTTTAGAGGTTACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR TCA 90 bp AAATCGTTGCAAGGGGATCCAGGTTGCAGGGTGATGGTTCGACCACTGAAGTGCTCAATCGCTTTAACATaGCTGGATATCTGGGCAATC +
Preference number: 4 (lower is better)
Translates to: KSLQGDPGCRVMVRPLKCSIALT*LDIWAI
Trigger: GATTGCCCAGATATCCAGTCATGTTAAAGCGATTGA...GCACTTCAGTGGTCGAACCATCACCCTGCAACCTGGATCCCCTTGCAACGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR TCA 90 bp GTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCGAGCCTCCTAGCCTTGAGAATCCTGGACCACTaGATACCACCATTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: VHWQVMSPMLRWSSLLALRILDH*IPPFSV
Trigger: AACAGAGAATGGTGGTATTCAGTGGTCCAGGATTCT...CAAGGCTAGGAGGCTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260408.8
ENST00000402627.5
CDS-3UTR TCA 90 bp GTCACCCAGGGACCGAACTTCTACTCTAAGAGACCCAATCCAGCCTACAAATCAGAGGGGGCACTGTTTTaGCAATCCACTAACTACACT +
Preference number: 4 (lower is better)
Translates to: VTQGPNFYSKRPNPAYKSEGALF*QSTNYT
Trigger: AGTGTAGTTAGTGGATTGTCAAAACAGTGCCCCCTC...TGATTTGTAGGCTGGATTGGGTCTCTTAGAGTAGAAGTTCGGTCCCTGGGTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461408.2
CDS-3UTR GCA 90 bp GTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCGAGCCTCCTAGCCTTGCCCACTTCCAACCTTTaGACAGTCCAAAAACAAAGG +
Preference number: 4 (lower is better)
Translates to: VHWQVMSPMLRWSSLLALPTSNL*TVQKQR
Trigger: CCTTTGTTTTTGGACTGTGCAAAGGTTGGAAGTGGG...CAAGGCTAGGAGGCTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR GCA 90 bp ACTACAGGGACAAATACAAGGACTGAGGGTCGAGTAGTTTGCTCCGCTTGGACAACCAAGTATGACACCTaGCAAAGTACAAGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: TTGTNTRTEGRVVCSAWTTKYDT*QSTSQL
Trigger: GAGCTGGCTTGTACTTTGGCAGGTGTCATACTTGGT...TGTCCAAGCGGAGCAAACTACTCGACCCTCAGTCCTTGTATTTGTCCCTGTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CCA 90 bp GTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCGAGCCTCCTAGCCTTGGTGCCACCACGAGTCTaGATGAATCCTTCAAATCTT +
Preference number: 4 (lower is better)
Translates to: VHWQVMSPMLRWSSLLALVPPRV*MNPSNL
Trigger: AAGATTTGAAGGATTCATCCAGACTCGTGGTGGCAC...CAAGGCTAGGAGGCTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CCA 90 bp AAATCGTTGCAAGGGGATCCAGGTTGCAGGGTGATGGTTCGACCACTGAAGTGCTGTTCCAGAATCATGTaGGGATCCAAAGTTATGTCC +
Preference number: 4 (lower is better)
Translates to: KSLQGDPGCRVMVRPLKCCSRIM*GSKVMS
Trigger: GGACATAACTTTGGATCCCCACATGATTCTGGAACA...GCACTTCAGTGGTCGAACCATCACCCTGCAACCTGGATCCCCTTGCAACGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396136.6
3UTR CAA 72 bp ACAAGGTATGTACATTGGCAAGTGATGTCTCCAATGTaGAGGTGGTCGAGCCTCCTAGCCTTGATTGGCAGT +
Preference number: 4 (lower is better)
Translates to: TRYVHWQVMSPM*RWSSLLALIGS
Trigger: ACTGCCAATCAAGGCTAGGAGGCTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTACATACCTTGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260408.8
ENST00000402627.5
CDS-3UTR TCA 90 bp ACTACAGGGACAAATACAAGGACTGAGGGTCGAGTAGTTTGCTCCGCTTGGACAGCAGCATGTTCTTCTTaGGGTATCTGTGTTACTTCC +
Preference number: 4 (lower is better)
Translates to: TTGTNTRTEGRVVCSAWTAACSS*GICVTS
Trigger: GGAAGTAACACAGATACCTCAAGAAGAACATGCTGC...TGTCCAAGCGGAGCAAACTACTCGACCCTCAGTCCTTGTATTTGTCCCTGTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR TCA 90 bp ACTACAGGGACAAATACAAGGACTGAGGGTCGAGTAGTTTGCTCCGCTTGGACACAAAATCTCGGTCTGTaGAGACATAGGCCAAACAGT +
Preference number: 4 (lower is better)
Translates to: TTGTNTRTEGRVVCSAWTQNLGL*RHRPNS
Trigger: ACTGTTTGGCCTATGTCTTCACAGACCGAGATTTTG...TGTCCAAGCGGAGCAAACTACTCGACCCTCAGTCCTTGTATTTGTCCCTGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR TCA 90 bp GTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCGAGCCTCCTAGCCTTGTGTACTGGCACAAGTTaGTGGGTCCATTTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: VHWQVMSPMLRWSSLLALCTGTS*WVHFLH
Trigger: ATGAAGAAAATGGACCCATCAACTTGTGCCAGTACA...CAAGGCTAGGAGGCTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR TCA 90 bp GTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCGAGCCTCCTAGCCTTGAAGTTTGCCTGCAAGTaGAGAAAATGCAGCAACGAA +
Preference number: 4 (lower is better)
Translates to: VHWQVMSPMLRWSSLLALKFACK*RKCSNE
Trigger: TTCGTTGCTGCATTTTCTTCACTTGCAGGCAAACTT...CAAGGCTAGGAGGCTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260408.8
ENST00000402627.5
CDS-3UTR GCA 90 bp TTCTTCCCTCTGGTTGATTTGCATCGAAGCAGCATTCATCTTTACACTGGTCACGTTCGACCACTGAAGTaGCTACTCCACTGCACAGAC +
Preference number: 4 (lower is better)
Translates to: FFPLVDLHRSSIHLYTGHVRPLK*LLHCTD
Trigger: GTCTGTGCAGTGGAGTAGGCACTTCAGTGGTCGAAC...GTGACCAGTGTAAAGATGAATGCTGCTTCGATGCAAATCAACCAGAGGGAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR GCA 90 bp GTCTGTGGTCTGGTAAATTGTATCAATCGCTTTAACATGACTGGATATCTGGGCCAAGGGGATCCAGGTTaGAGGGTGATGGTTCGACCA +
Preference number: 4 (lower is better)
Translates to: VCGLVNCINRFNMTGYLGQGDPG*RVMVRP
Trigger: TGGTCGAACCATCACCCTGCAACCTGGATCCCCTTG...GCCCAGATATCCAGTCATGTTAAAGCGATTGATACAATTTACCAGACCACAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR GCA 90 bp GTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCGAGCCTCCTAGCCTTGAATGCTTCCCCAAACTaGATGACATTGCTTGACACT +
Preference number: 4 (lower is better)
Translates to: VHWQVMSPMLRWSSLLALNASPN*MTLLDT
Trigger: AGTGTCAAGCAATGTCATGCAGTTTGGGGAAGCATT...CAAGGCTAGGAGGCTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR GCA 90 bp AGGTATGTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCGAGCCTCCTAACTGTCCCTGGCAGCTaGTTTAAAACTACATCTGGC +
Preference number: 4 (lower is better)
Translates to: RYVHWQVMSPMLRWSSLLTVPGS*FKTTSG
Trigger: GCCAGATGTAGTTTTAAAGCAGCTGCCAGGGACAGT...TAGGAGGCTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTACATACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR GCA 90 bp TCTACTCCACCTGAAAGTTTAACGAAACTCTTCAAGTTGGGTCACCCAGGGACCACTATAACAGAAGTCTaGCTACGCAGTACCACCCTC +
Preference number: 4 (lower is better)
Translates to: STPPESLTKLFKLGHPGTTITEV*LRSTTL
Trigger: GAGGGTGGTACTGCGTAGGCAGACTTCTGTTATAGT...GGTCCCTGGGTGACCCAACTTGAAGAGTTTCGTTAAACTTTCAGGTGGAGTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461408.2
CDS-3UTR CCA 90 bp TATGTCACAAGCTTCAATTTTTGTAATGCCCCTTCTATTTCCTGCATAGCAATAAGCCGGGACCTCCCCTaGCAGGAGAAACGGCGAAGC +
Preference number: 4 (lower is better)
Translates to: YVTSFNFCNAPSISCIAISRDLP*QEKRRS
Trigger: GCTTCGCCGTTTCTCCTGCCAGGGGAGGTCCCGGCT...TATTGCTATGCAGGAAATAGAAGGGGCATTACAAAAATTGAAGCTTGTGACATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CCA 90 bp GTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCGAGCCTCCTAGCCTTGAGCATTACAGAATCCTaGACCACTGAATACCACCAT +
Preference number: 4 (lower is better)
Translates to: VHWQVMSPMLRWSSLLALSITES*TTEYHH
Trigger: ATGGTGGTATTCAGTGGTCCAGGATTCTGTAATGCT...CAAGGCTAGGAGGCTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260408.8
ENST00000402627.5
CDS-3UTR CCA 90 bp ACTACAGGGACAAATACAAGGACTGAGGGTCGAGTAGTTTGCTCCGCTTGGACATGCATGATCAGCTCTTaGATCACCAAAAACCTCCTC +
Preference number: 4 (lower is better)
Translates to: TTGTNTRTEGRVVCSAWTCMISS*ITKNLL
Trigger: GAGGAGGTTTTTGGTGATCCAAGAGCTGATCATGCA...TGTCCAAGCGGAGCAAACTACTCGACCCTCAGTCCTTGTATTTGTCCCTGTAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR TCA 90 bp AGGTATGTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCGAGCCTCCTACTAATCTGCACCGCATaGAAACATCACAGTAACCTC +
Preference number: 4 (lower is better)
Translates to: RYVHWQVMSPMLRWSSLLLICTA*KHHSNL
Trigger: GAGGTTACTGTGATGTTTTCATGCGGTGCAGATTAG...TAGGAGGCTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTACATACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR TCA 90 bp AGGTATGTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCGAGCCTCCTAAGAATCCTGGACCACTaGATACCACCATTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: RYVHWQVMSPMLRWSSLLRILDH*IPPFSV
Trigger: AACAGAGAATGGTGGTATTCAGTGGTCCAGGATTCT...TAGGAGGCTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTACATACCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260408.8
ENST00000402627.5
CDS-3UTR TCA 90 bp AGGTATGTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCGAGCCTCCTAGCCACTGAGTGTAAATaGTTCTCTCGAAAGTTTGGC +
Preference number: 4 (lower is better)
Translates to: RYVHWQVMSPMLRWSSLLATECK*FSRKFG
Trigger: GCCAAACTTTCGAGAGAATCATTTACACTCAGTGGC...TAGGAGGCTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTACATACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR GCA 90 bp CCTATTACAGTCTGTGAAGTTTGGTTTAGGGTCAGATGCTGGGCAGAGAGCTGTTCCCTCTGGTTGATTTaGATCGAAGCAGCATTCATC +
Preference number: 4 (lower is better)
Translates to: PITVCEVWFRVRCWAESCSLWLI*IEAAFI
Trigger: GATGAATGCTGCTTCGATGCAAATCAACCAGAGGGA...ACAGCTCTCTGCCCAGCATCTGACCCTAAACCAAACTTCACAGACTGTAATAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR GCA 90 bp CCTATTACAGTCTGTGAAGTTTGGTTTAGGGTCAGATGCTGGGCAGAGAGCTGTCTTGAATGCACACTGTaGTGTACAACAAGGACCTTG +
Preference number: 4 (lower is better)
Translates to: PITVCEVWFRVRCWAESCLECTL*CTTRTL
Trigger: CAAGGTCCTTGTTGTACAGCACAGTGTGCATTCAAG...ACAGCTCTCTGCCCAGCATCTGACCCTAAACCAAACTTCACAGACTGTAATAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR GCA 90 bp ACTCTGTTCCAGAATCATGTGGGGATCCAAAGTTATGTCCAACTTCGTGAGCAATGGTTTAGGGTCAGATaGTGGGCAGAGAGCTGTGAA +
Preference number: 4 (lower is better)
Translates to: TLFQNHVGIQSYVQLREQWFRVR*WAESCE
Trigger: TTCACAGCTCTCTGCCCAGCATCTGACCCTAAACCA...TTGCTCACGAAGTTGGACATAACTTTGGATCCCCACATGATTCTGGAACAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR GCA 90 bp GCTCCAACCCAAGCCAGACCAAGTACGCCATCATCAAAATCTCGGTCTGTGAAGATAGAACCTGCACATTaGCCATTAATGCACACTTGT +
Preference number: 4 (lower is better)
Translates to: APTQARPSTPSSKSRSVKIEPAH*PLMHTC
Trigger: ACAAGTGTGCATTAATGGGCAATGTGCAGGTTCTAT...CTTCACAGACCGAGATTTTGATGATGGCGTACTTGGTCTGGCTTGGGTTGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR GCA 90 bp GTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCGAGCCTCCTAGCCTTGCAGTATTTTGCTCAATaGTCCGTTTTACCTAGCATC +
Preference number: 4 (lower is better)
Translates to: VHWQVMSPMLRWSSLLALQYFAQ*SVLPSI
Trigger: GATGCTAGGTAAAACGGAGCATTGAGCAAAATACTG...CAAGGCTAGGAGGCTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR GCA 90 bp ACTACAGGGACAAATACAAGGACTGAGGGTCGAGTAGTTTGCTCCGCTTGGACATCTCAGTCCTATCTCTaGATTATCAGCTGTGACAAC +
Preference number: 4 (lower is better)
Translates to: TTGTNTRTEGRVVCSAWTSQSYL*IISCDN
Trigger: GTTGTCACAGCTGATAATGCAGAGATAGGACTGAGA...TGTCCAAGCGGAGCAAACTACTCGACCCTCAGTCCTTGTATTTGTCCCTGTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR GCA 90 bp CAATCCAGCCTACAAATCAAAGAACATCCCCAAATGGTTTACCCTTCTCCCGACATACACGAGCCCAGCTaGAAACAACACAACTTCCCA +
Preference number: 4 (lower is better)
Translates to: QSSLQIKEHPQMVYPSPDIHEPS*KQHNFP
Trigger: TGGGAAGTTGTGTTGTTTGCAGCTGGGCTCGTGTAT...GTCGGGAGAAGGGTAAACCATTTGGGGATGTTCTTTGATTTGTAGGCTGGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461408.2
CDS-3UTR CCA 90 bp ACTACAGGGACAAATACAAGGACTGAGGGTCGAGTAGTTTGCTCCGCTTGGACATGTTCCAGAATCATGTaGGGATCCAAAGTTATGTCC +
Preference number: 4 (lower is better)
Translates to: TTGTNTRTEGRVVCSAWTCSRIM*GSKVMS
Trigger: GGACATAACTTTGGATCCCCACATGATTCTGGAACA...TGTCCAAGCGGAGCAAACTACTCGACCCTCAGTCCTTGTATTTGTCCCTGTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CCA 90 bp ACTACAGGGACAAATACAAGGACTGAGGGTCGAGTAGTTTGCTCCGCTTGGACAAGGAGGAGGCAACTTTaGATTACTACTTGGAGTATG +
Preference number: 4 (lower is better)
Translates to: TTGTNTRTEGRVVCSAWTRRRQL*ITTWSM
Trigger: CATACTCCAAGTAGTAATCCAAAGTTGCCTCCTCCT...TGTCCAAGCGGAGCAAACTACTCGACCCTCAGTCCTTGTATTTGTCCCTGTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CCA 90 bp AAAGCATTACAGAATCCTGGACCACTGAATACCACCATTCTCTGTTATCCTGAGTCTCCAATGTTGAGGTaGTCGAGCCTCCTAGCCTTG +
Preference number: 4 (lower is better)
Translates to: KALQNPGPLNTTILCYPESPMLR*SSLLAL
Trigger: CAAGGCTAGGAGGCTCGACCACCTCAACATTGGAGA...CTCAGGATAACAGAGAATGGTGGTATTCAGTGGTCCAGGATTCTGTAATGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260408.8
ENST00000402627.5
CDS-3UTR CCA 90 bp TTCTTATCATCTAGCCAAGGCCCTGGCACAATCAAGTGCCTAAGAAGTATCTGTTCTGGGAAGTCATCTTaGCTCTTCCCACTACCTACC +
Preference number: 4 (lower is better)
Translates to: FLSSSQGPGTIKCLRSICSGKSS*LFPLPT
Trigger: GGTAGGTAGTGGGAAGAGCCAAGATGACTTCCCAGA...ACAGATACTTCTTAGGCACTTGATTGTGCCAGGGCCTTGGCTAGATGATAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CCA 90 bp ATGTTTTCAAGAACACCAACACACCCTCCTGTGATCTCTCTCCAAACACAGGACCCAAACCCTTTCCCCTaGGCGACAGAATGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: MFSRTPTHPPVISLQTQDPNPFP*ATECFQ
Trigger: TTGAAAACATTCTGTCGCCCAGGGGAAAGGGTTTGG...GTCCTGTGTTTGGAGAGAGATCACAGGAGGGTGTGTTGGTGTTCTTGAAAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000461408.2
CDS-3UTR TCA 90 bp AAGGTAACTGGTCAATGCATATCAGCAAATGCATACCATAAAAGCCAAAGAATTAAAGGATTCCCATACTaGCCTCCCATCCCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: KVTGQCISANAYHKSQRIKGFPY*PPIPAA
Trigger: GGCGGCGGGGATGGGAGGTCAGTATGGGAATCCTTT...AATTCTTTGGCTTTTATGGTATGCATTTGCTGATATGCATTGACCAGTTACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR TCA 90 bp TGTGTATGCCTATTACAGTCTGTGAAGTTTGGTTTAGGGTCAGATGCTGGGCAGCAAAATCTCGGTCTGTaGAGACATAGGCCAAACAGT +
Preference number: 4 (lower is better)
Translates to: CVCLLQSVKFGLGSDAGQQNLGL*RHRPNS
Trigger: ACTGTTTGGCCTATGTCTTCACAGACCGAGATTTTG...CTGCCCAGCATCTGACCCTAAACCAAACTTCACAGACTGTAATAGGCATACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR TCA 90 bp TCTCCTGGTGTGCACTCTGTTCCAGAATCATGTGGGGATCCAAAGTTATGTCCAAAGTTTGCCTGCAAGTaGAGAAAATGCAGCAACGAA +
Preference number: 4 (lower is better)
Translates to: SPGVHSVPESCGDPKLCPKFACK*RKCSNE
Trigger: TTCGTTGCTGCATTTTCTTCACTTGCAGGCAAACTT...TGGACATAACTTTGGATCCCCACATGATTCTGGAACAGAGTGCACACCAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR TCA 90 bp ACTACAGGGACAAATACAAGGACTGAGGGTCGAGTAGTTTGCTCCGCTTGGACAATTTCTAAAAGCTTGTaGCAGCAGCTTGGACTAGTT +
Preference number: 4 (lower is better)
Translates to: TTGTNTRTEGRVVCSAWTISKSL*QQLGLV
Trigger: AACTAGTCCAAGCTGCTGTCACAAGCTTTTAGAAAT...TGTCCAAGCGGAGCAAACTACTCGACCCTCAGTCCTTGTATTTGTCCCTGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR TCA 90 bp GTTACGGATTCCGGAGAAGTCTGTGGTCTGGTAAATTGTATCAATCGCTTTAACGCTTTCTTCCATGAGTaGAGCAGAAGAGCACAGGGT +
Preference number: 4 (lower is better)
Translates to: VTDSGEVCGLVNCINRFNAFFHE*SRRAQG
Trigger: ACCCTGTGCTCTTCTGCTTCACTCATGGAAGAAAGC...GTTAAAGCGATTGATACAATTTACCAGACCACAGACTTCTCCGGAATCCGTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR GCA 90 bp AGGTATGTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCGAGCCTCCTATGGAATGGGACATTGTaGTGTTTCACCTTCAATGCT +
Preference number: 4 (lower is better)
Translates to: RYVHWQVMSPMLRWSSLLWNGTL*CFTFNA
Trigger: AGCATTGAAGGTGAAACAGCACAATGTCCCATTCCA...TAGGAGGCTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTACATACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR GCA 90 bp AAAGCATTACAGAATCCTGGACCACTGAATACCACCATTCTCTGTTATCCTGAGGGCAGTGTGTGTACCTaGCAAAATCCTACCACAGGA +
Preference number: 4 (lower is better)
Translates to: KALQNPGPLNTTILCYPEGSVCT*QNPTTG
Trigger: TCCTGTGGTAGGATTTTGGCAGGTACACACACTGCC...CTCAGGATAACAGAGAATGGTGGTATTCAGTGGTCCAGGATTCTGTAATGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR GCA 90 bp TTCTTATCATCTAGCCAAGGCCCTGGCACAATCAAGTGCCTAAGAAGTATCTGTGGAGTCTCACTATTTTaGCCAGGCTGGTCTCTAACT +
Preference number: 4 (lower is better)
Translates to: FLSSSQGPGTIKCLRSICGVSLF*PGWSLT
Trigger: AGTTAGAGACCAGCCTGGGCAAAATAGTGAGACTCC...ACAGATACTTCTTAGGCACTTGATTGTGCCAGGGCCTTGGCTAGATGATAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR GCA 90 bp GTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCGAGCCTCCTAGCCTTGAAGGTAACTGGTCAATaGATATCAGCAAATGCATAC +
Preference number: 4 (lower is better)
Translates to: VHWQVMSPMLRWSSLLALKVTGQ*ISANAY
Trigger: GTATGCATTTGCTGATATGCATTGACCAGTTACCTT...CAAGGCTAGGAGGCTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CCA 90 bp ACTACAGGGACAAATACAAGGACTGAGGGTCGAGTAGTTTGCTCCGCTTGGACATTGAAATGTCTTCCATaGGCATGGAAATCTAGACGT +
Preference number: 4 (lower is better)
Translates to: TTGTNTRTEGRVVCSAWTLKCLP*AWKSRR
Trigger: ACGTCTAGATTTCCATGCCCATGGAAGACATTTCAA...TGTCCAAGCGGAGCAAACTACTCGACCCTCAGTCCTTGTATTTGTCCCTGTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CCA 90 bp TGTGTATGCCTATTACAGTCTGTGAAGTTTGGTTTAGGGTCAGATGCTGGGCAGGTGCCACCACGAGTCTaGATGAATCCTTCAAATCTT +
Preference number: 4 (lower is better)
Translates to: CVCLLQSVKFGLGSDAGQVPPRV*MNPSNL
Trigger: AAGATTTGAAGGATTCATCCAGACTCGTGGTGGCAC...CTGCCCAGCATCTGACCCTAAACCAAACTTCACAGACTGTAATAGGCATACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR CCA 90 bp CCTATTACAGTCTGTGAAGTTTGGTTTAGGGTCAGATGCTGGGCAGAGAGCTGTGCATTTTCTTCCCTCTaGTTGATTTGCATCGAAGCA +
Preference number: 4 (lower is better)
Translates to: PITVCEVWFRVRCWAESCAFSSL*LICIEA
Trigger: TGCTTCGATGCAAATCAACCAGAGGGAAGAAAATGC...ACAGCTCTCTGCCCAGCATCTGACCCTAAACCAAACTTCACAGACTGTAATAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR CCA 90 bp ACATTGCCCATTAATGCACACTTGTGTATGCCTATTACAGTCTGTGAAGTTTGGTTTAGGGTCAGATGCTaGGCAGAGAGCTGTGAAGCC +
Preference number: 4 (lower is better)
Translates to: TLPINAHLCMPITVCEVWFRVRC*AESCEA
Trigger: GGCTTCACAGCTCTCTGCCCAGCATCTGACCCTAAA...CCAAACTTCACAGACTGTAATAGGCATACACAAGTGTGCATTAATGGGCAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR CCA 90 bp AATGCAGCAACGAAGAACAGGGAACACGGGGCACATAATAATATTCTAAGACTTGCACAGACCCTGTACTaGCACAAGTTGATGGGTCCA +
Preference number: 4 (lower is better)
Translates to: NAATKNREHGAHNNILRLAQTLY*HKLMGP
Trigger: TGGACCCATCAACTTGTGCCAGTACAGGGTCTGTGC...AAGTCTTAGAATATTATTATGTGCCCCGTGTTCCCTGTTCTTCGTTGCTGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260408.8
ENST00000396136.6
CDS-3UTR CCA 90 bp AAGGTAACTGGTCAATGCATATCAGCAAATGCATACCATAAAAGCCAAAGAATTGCTGGGGTTGCTGAATaGGCTGTGGAGGTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: KVTGQCISANAYHKSQRIAGVAE*AVEVSS
Trigger: GGAGGAGACCTCCACAGCCCATTCAGCAACCCCAGC...AATTCTTTGGCTTTTATGGTATGCATTTGCTGATATGCATTGACCAGTTACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CCA 90 bp AGGTATGTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCGAGCCTCCTAGTGGCTGCATATATGTaGATTTCTAAGGATGGGACT +
Preference number: 4 (lower is better)
Translates to: RYVHWQVMSPMLRWSSLLVAAYM*ISKDGT
Trigger: AGTCCCATCCTTAGAAATCCACATATATGCAGCCAC...TAGGAGGCTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTACATACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR CAA 72 bp GGTCTGAAAAGCGAAGCGCCTTTCACAACTCCCAGATaGTTGGGCCAATATCCTAAGGAGAATAACCAAGTA +
Preference number: 4 (lower is better)
Translates to: GLKSEAPFTTPR*LGQYPKENNQV
Trigger: TACTTGGTTATTCTCCTTAGGATATTGGCCCAACAATCTGGGAGTTGTGAAAGGCGCTTCGCTTTTCAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR TCA 90 bp GTTACGGATTCCGGAGAAGTCTGTGGTCTGGTAAATTGTATCAATCGCTTTAACGTACAACAAGGACCTTaGCTTGGACTGCACTGTTTC +
Preference number: 4 (lower is better)
Translates to: VTDSGEVCGLVNCINRFNVQQGP*LGLHCF
Trigger: GAAACAGTGCAGTCCAAGTCAAGGTCCTTGTTGTAC...GTTAAAGCGATTGATACAATTTACCAGACCACAGACTTCTCCGGAATCCGTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR TCA 90 bp ACAACAAGGACCTTGACTTGGACTGCACTGTTTCCCAGGTTTCAGTTTGCATTTACACTTCTCAGACTTTaGCTTGAATGCACACTGTGC +
Preference number: 4 (lower is better)
Translates to: TTRTLTWTALFPRFQFAFTLLRL*LECTLC
Trigger: GCACAGTGTGCATTCAAGTCAAAGTCTGAGAAGTGT...AAATGCAAACTGAAACCTGGGAAACAGTGCAGTCCAAGTCAAGGTCCTTGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR TCA 90 bp TTCTCCACACCAATATTTGGGAAACGGAAAGGATTTGTAGGGTCCTTCTCATCACTGGGCAGAGAGCTGTaGAGCCATTACATATTCCTT +
Preference number: 4 (lower is better)
Translates to: FSTPIFGKRKGFVGSFSSLGREL*SHYIFL
Trigger: AAGGAATATGTAATGGCTTCACAGCTCTCTGCCCAG...TGATGAGAAGGACCCTACAAATCCTTTCCGTTTCCCAAATATTGGTGTGGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR TCA 90 bp TTCTTATCATCTAGCCAAGGCCCTGGCACAATCAAGTGCCTAAGAAGTATCTGTAGGAGGCACAAAATCTaGTTGCTCTCACTTTGTGAG +
Preference number: 4 (lower is better)
Translates to: FLSSSQGPGTIKCLRSICRRHKI*LLSLCE
Trigger: CTCACAAAGTGAGAGCAATCAGATTTTGTGCCTCCT...ACAGATACTTCTTAGGCACTTGATTGTGCCAGGGCCTTGGCTAGATGATAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR TCA 90 bp AAAGCATTACAGAATCCTGGACCACTGAATACCACCATTCTCTGTTATCCTGAGAGTCCTATCTCTGCATaGTCAGCTCTTGGATCACCA +
Preference number: 4 (lower is better)
Translates to: KALQNPGPLNTTILCYPESPISA*SALGSP
Trigger: TGGTGATCCAAGAGCTGATCATGCAGAGATAGGACT...CTCAGGATAACAGAGAATGGTGGTATTCAGTGGTCCAGGATTCTGTAATGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR GCA 90 bp TGTGTATGCCTATTACAGTCTGTGAAGTTTGGTTTAGGGTCAGATGCTGGGCAGCTCACAGATAGAACCTaGACATTGCCCATTAATGCA +
Preference number: 4 (lower is better)
Translates to: CVCLLQSVKFGLGSDAGQLTDRT*TLPINA
Trigger: TGCATTAATGGGCAATGTGCAGGTTCTATCTGTGAG...CTGCCCAGCATCTGACCCTAAACCAAACTTCACAGACTGTAATAGGCATACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR GCA 90 bp AATGCAGCAACGAAGAACAGGGAACACGGGGCACATAATAATATTCTAAGACTTGAGGGTCGAGTAGTTTaGTCCGCTTGGACAAATCAG +
Preference number: 4 (lower is better)
Translates to: NAATKNREHGAHNNILRLEGRVV*SAWTNQ
Trigger: CTGATTTGTCCAAGCGGAGCAAACTACTCGACCCTC...AAGTCTTAGAATATTATTATGTGCCCCGTGTTCCCTGTTCTTCGTTGCTGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR GCA 90 bp AGGTATGTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCGAGCCTCCTACCCAAATCTTACCAGTaGAAACTACACCATTCTGTT +
Preference number: 4 (lower is better)
Translates to: RYVHWQVMSPMLRWSSLLPKSYQ*KLHHSV
Trigger: AACAGAATGGTGTAGTTTGCACTGGTAAGATTTGGG...TAGGAGGCTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTACATACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR GCA 90 bp TATGTCACAAGCTTCAATTTTTGTAATGCCCCTTCTATTTCCTGCATAGCAATACCTGAAGGCACAGACTaGAGTCCTTTGGGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: YVTSFNFCNAPSISCIAIPEGTD*SPLGAV
Trigger: CACAGCCCCCAAAGGACTGCAGTCTGTGCCTTCAGG...TATTGCTATGCAGGAAATAGAAGGGGCATTACAAAAATTGAAGCTTGTGACATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR GCA 90 bp CTGCATATAACAAGGTATGTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGAATAAAGCCCAGTCCTaGAGAGGAATCGAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: LHITRYVHWQVMSPMLRWNKAQS*RGIEGK
Trigger: CTTTCCCTCGATTCCTCTGCAGGACTGGGCTTTATT...CCACCTCAACATTGGAGACATCACTTGCCAATGTACATACCTTGTTATATGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR GCA 90 bp GTCACCCAGGGACCGAACTTCTACTCTAAGAGACCCAATCCAGCCTACAAATCATACTACTCAGTAAAGTaGCTCATGTGTTTGTCTTAC +
Preference number: 4 (lower is better)
Translates to: VTQGPNFYSKRPNPAYKSYYSVK*LMCLSY
Trigger: GTAAGACAAACACATGAGGCACTTTACTGAGTAGTA...TGATTTGTAGGCTGGATTGGGTCTCTTAGAGTAGAAGTTCGGTCCCTGGGTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461408.2
CDS-3UTR CCA 90 bp ACTACAGGGACAAATACAAGGACTGAGGGTCGAGTAGTTTGCTCCGCTTGGACATCAATAACAGACCCATaGCTAAAACTTCCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: TTGTNTRTEGRVVCSAWTSITDP*LKLPSS
Trigger: TGAAGAAGGAAGTTTTAGCCATGGGTCTGTTATTGA...TGTCCAAGCGGAGCAAACTACTCGACCCTCAGTCCTTGTATTTGTCCCTGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CCA 90 bp AATGCAGCAACGAAGAACAGGGAACACGGGGCACATAATAATATTCTAAGACTTACAAGGACCTTGACTTaGACTGCACTGTTTCCCAGG +
Preference number: 4 (lower is better)
Translates to: NAATKNREHGAHNNILRLTRTLT*TALFPR
Trigger: CCTGGGAAACAGTGCAGTCCAAGTCAAGGTCCTTGT...AAGTCTTAGAATATTATTATGTGCCCCGTGTTCCCTGTTCTTCGTTGCTGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260408.8
ENST00000396136.6
CDS-3UTR CCA 90 bp ACTCTGTTCCAGAATCATGTGGGGATCCAAAGTTATGTCCAACTTCGTGAGCAAACAGTCTGTGAAGTTTaGTTTAGGGTCAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: TLFQNHVGIQSYVQLREQTVCEV*FRVRCW
Trigger: CCAGCATCTGACCCTAAACCAAACTTCACAGACTGT...TTGCTCACGAAGTTGGACATAACTTTGGATCCCCACATGATTCTGGAACAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR CCA 90 bp AATGCAGCAACGAAGAACAGGGAACACGGGGCACATAATAATATTCTAAGACTTATCTGGCTTGCACCCTaGTTTTGGGAAACCTTGACC +
Preference number: 4 (lower is better)
Translates to: NAATKNREHGAHNNILRLIWLAP*FWETLT
Trigger: GGTCAAGGTTTCCCAAAACCAGGGTGCAAGCCAGAT...AAGTCTTAGAATATTATTATGTGCCCCGTGTTCCCTGTTCTTCGTTGCTGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CCA 90 bp CTGCATATAACAAGGTATGTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGCCAGCTTTTCTCCTCTaGGAAGTCATCTTGGCTCTT +
Preference number: 4 (lower is better)
Translates to: LHITRYVHWQVMSPMLRWPAFLL*EVILAL
Trigger: AAGAGCCAAGATGACTTCCCAGAGGAGAAAAGCTGG...CCACCTCAACATTGGAGACATCACTTGCCAATGTACATACCTTGTTATATGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CCA 90 bp AGGTATGTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCGAGCCTCCTACCAAGCTCAAGGAAATaGAGATTAATAAAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: RYVHWQVMSPMLRWSSLLPSSRK*RLIKPS
Trigger: ACTGGGCTTTATTAATCTCCATTTCCTTGAGCTTGG...TAGGAGGCTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTACATACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR TCA 90 bp ATGTGGGGATCCAAAGTTATGTCCAACTTCGTGAGCAAAAGTAATGTGAGAGACGCAGCATGTTCTTCTTaGGGTATCTGTGTTACTTCC +
Preference number: 4 (lower is better)
Translates to: MWGSKVMSNFVSKSNVRDAACSS*GICVTS
Trigger: GGAAGTAACACAGATACCTCAAGAAGAACATGCTGC...GTCTCTCACATTACTTTTGCTCACGAAGTTGGACATAACTTTGGATCCCCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR TCA 90 bp CTGCATATAACAAGGTATGTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCTCAGACTTTGACTTaGATGCACACTGTGCTGTAC +
Preference number: 4 (lower is better)
Translates to: LHITRYVHWQVMSPMLRWSQTLT*MHTVLY
Trigger: GTACAGCACAGTGTGCATTCAAGTCAAAGTCTGAGA...CCACCTCAACATTGGAGACATCACTTGCCAATGTACATACCTTGTTATATGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR TCA 90 bp AATGCAGCAACGAAGAACAGGGAACACGGGGCACATAATAATATTCTAAGACTTGACAAATACAAGGACTaGGGGTCGAGTAGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: NAATKNREHGAHNNILRLDKYKD*GSSSLL
Trigger: GAGCAAACTACTCGACCCTCAGTCCTTGTATTTGTC...AAGTCTTAGAATATTATTATGTGCCCCGTGTTCCCTGTTCTTCGTTGCTGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR TCA 90 bp AAAGCATTACAGAATCCTGGACCACTGAATACCACCATTCTCTGTTATCCTGAGTTGTACTCCTCCAGGTaGACTGTCCAGGTTTGTAAT +
Preference number: 4 (lower is better)
Translates to: KALQNPGPLNTTILCYPELYSSR*TVQVCN
Trigger: ATTACAAACCTGGACAGTTCACCTGGAGGAGTACAA...CTCAGGATAACAGAGAATGGTGGTATTCAGTGGTCCAGGATTCTGTAATGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR GCA 90 bp CTGCATATAACAAGGTATGTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCCCTCTGGTTGATTTaGATCGAAGCAGCATTCATC +
Preference number: 4 (lower is better)
Translates to: LHITRYVHWQVMSPMLRWSLWLI*IEAAFI
Trigger: GATGAATGCTGCTTCGATGCAAATCAACCAGAGGGA...CCACCTCAACATTGGAGACATCACTTGCCAATGTACATACCTTGTTATATGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR GCA 90 bp TTTGTAGGGTCCTTCTCATCAGCAGTTGTATTGATTCTTATGCGTTTCACCATGGACCTTGACTTGGACTaGACTGTTTCCCAGGTTTCA +
Preference number: 4 (lower is better)
Translates to: FVGSFSSAVVLILMRFTMDLDLD*TVSQVS
Trigger: TGAAACCTGGGAAACAGTGCAGTCCAAGTCAAGGTC...CATGGTGAAACGCATAAGAATCAATACAACTGCTGATGAGAAGGACCCTACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR GCA 90 bp TATGTCACAAGCTTCAATTTTTGTAATGCCCCTTCTATTTCCTGCATAGCAATACAAGGGGATCCAGGTTaGAGGGTGATGGTTCGACCA +
Preference number: 4 (lower is better)
Translates to: YVTSFNFCNAPSISCIAIQGDPG*RVMVRP
Trigger: TGGTCGAACCATCACCCTGCAACCTGGATCCCCTTG...TATTGCTATGCAGGAAATAGAAGGGGCATTACAAAAATTGAAGCTTGTGACATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR GCA 90 bp ATTCGCAGTGGAAAGAGTTCAGTGCATGTATCTCTTTTCAGAAAACATTTAACTCAAATCTCCTGCCTCTaGCTCCCGAGTAGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: IRSGKSSVHVSLFRKHLTQISCL*LPSSWD
Trigger: ATCCCAGCTACTCGGGAGGCAGAGGCAGGAGATTTG...AGTTAAATGTTTTCTGAAAAGAGATACATGCACTGAACTCTTTCCACTGCGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR GCA 90 bp CCGAACTTCTACTCTAAGAGACCCAATCCAGCCTACAAATCAAAGAACATCCCCAAATACACTTGGTCCTaGAGTCATAAGTCAAAGTGG +
Preference number: 4 (lower is better)
Translates to: PNFYSKRPNPAYKSKNIPKYTWS*SHKSKW
Trigger: CCACTTTGACTTATGACTGCAGGACCAAGTGTATTT...GGGGATGTTCTTTGATTTGTAGGCTGGATTGGGTCTCTTAGAGTAGAAGTTCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461408.2
CDS-3UTR CCA 90 bp TCTCCTGGTGTGCACTCTGTTCCAGAATCATGTGGGGATCCAAAGTTATGTCCATTTCCACAAATAGGTTaGCCAGATTCAACAAAACAG +
Preference number: 4 (lower is better)
Translates to: SPGVHSVPESCGDPKLCPFPQIG*PDSTKQ
Trigger: CTGTTTTGTTGAATCTGGCCAACCTATTTGTGGAAA...TGGACATAACTTTGGATCCCCACATGATTCTGGAACAGAGTGCACACCAGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR CCA 90 bp CTGCATATAACAAGGTATGTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGACAGTCTGTGAAGTTTaGTTTAGGGTCAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: LHITRYVHWQVMSPMLRWTVCEV*FRVRCW
Trigger: CCAGCATCTGACCCTAAACCAAACTTCACAGACTGT...CCACCTCAACATTGGAGACATCACTTGCCAATGTACATACCTTGTTATATGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CCA 90 bp TGCATTTTCTTCCCTCTGGTTGATTTGCATCGAAGCAGCATTCATCTTTACACTCTTTGCCATCAGAACTaGCACACGTACACTCCTCTA +
Preference number: 4 (lower is better)
Translates to: CIFFPLVDLHRSSIHLYTLCHQN*HTYTPL
Trigger: TAGAGGAGTGTACGTGTGCCAGTTCTGATGGCAAAG...AGTGTAAAGATGAATGCTGCTTCGATGCAAATCAACCAGAGGGAAGAAAATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR CCA 90 bp ACTACAGGGACAAATACAAGGACTGAGGGTCGAGTAGTTTGCTCCGCTTGGACACTTTGGATTACTACTTaGAGTATGAACACTGCATAT +
Preference number: 4 (lower is better)
Translates to: TTGTNTRTEGRVVCSAWTLWITT*SMNTAY
Trigger: ATATGCAGTGTTCATACTCCAAGTAGTAATCCAAAG...TGTCCAAGCGGAGCAAACTACTCGACCCTCAGTCCTTGTATTTGTCCCTGTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CCA 90 bp CTGCATATAACAAGGTATGTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGCATTTTTGGCCTTGCTaGCTTGCGTCACATTATGAG +
Preference number: 4 (lower is better)
Translates to: LHITRYVHWQVMSPMLRWHFWPC*LASHYE
Trigger: CTCATAATGTGACGCAAGCCAGCAAGGCCAAAAATG...CCACCTCAACATTGGAGACATCACTTGCCAATGTACATACCTTGTTATATGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CCA 90 bp AAAGCATTACAGAATCCTGGACCACTGAATACCACCATTCTCTGTTATCCTGAGCAACTCCCAGATTGTTaGGCCAATATCCTAAGGAGA +
Preference number: 4 (lower is better)
Translates to: KALQNPGPLNTTILCYPEQLPDC*ANILRR
Trigger: TCTCCTTAGGATATTGGCCCAACAATCTGGGAGTTG...CTCAGGATAACAGAGAATGGTGGTATTCAGTGGTCCAGGATTCTGTAATGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR CAA 72 bp CATCTGCTTCCAGATTTCGTTCTTGTTCAATTCACCTaGTCCTTGTTGGATTACCCCACACCCTATCACTTT +
Preference number: 4 (lower is better)
Translates to: HLLPDFVLVQFT*SLLDYPTPYHF
Trigger: AAAGTGATAGGGTGTGGGGTAATCCAACAAGGACAAGGTGAATTGAACAAGAACGAAATCTGGAAGCAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR TCA 90 bp AAAGCATTACAGAATCCTGGACCACTGAATACCACCATTCTCTGTTATCCTGAGTCTTCATTCGTAGGTTaGAATGTCTTCCATGGGCAT +
Preference number: 4 (lower is better)
Translates to: KALQNPGPLNTTILCYPESSFVG*NVFHGH
Trigger: ATGCCCATGGAAGACATTTCAACCTACGAATGAAGA...CTCAGGATAACAGAGAATGGTGGTATTCAGTGGTCCAGGATTCTGTAATGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR TCA 90 bp AAAGTTATGTCCAACTTCGTGAGCAAAAGTAATGTGAGAGACTTTGGGAGGTACCACCACGAGTCTGGATaGATCCTTCAAATCTTCCAT +
Preference number: 4 (lower is better)
Translates to: KVMSNFVSKSNVRDFGRYHHESG*ILQIFH
Trigger: ATGGAAGATTTGAAGGATTCATCCAGACTCGTGGTG...GTACCTCCCAAAGTCTCTCACATTACTTTTGCTCACGAAGTTGGACATAACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR TCA 90 bp AAAGCATTACAGAATCCTGGACCACTGAATACCACCATTCTCTGTTATCCTGAGGTGGTAAAAGTTTATTaGGAGCCAAGTTTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: KALQNPGPLNTTILCYPEVVKVY*EPSLPA
Trigger: TGCAGGCAAACTTGGCTCTCAATAAACTTTTACCAC...CTCAGGATAACAGAGAATGGTGGTATTCAGTGGTCCAGGATTCTGTAATGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260408.8
ENST00000402627.5
CDS-3UTR TCA 90 bp AAAGCATTACAGAATCCTGGACCACTGAATACCACCATTCTCTGTTATCCTGAGACTATCCTAAGACTGTaGCAAACACGAAGTACCCAA +
Preference number: 4 (lower is better)
Translates to: KALQNPGPLNTTILCYPETILRL*QTRSTQ
Trigger: TTGGGTACTTCGTGTTTGTCACAGTCTTAGGATAGT...CTCAGGATAACAGAGAATGGTGGTATTCAGTGGTCCAGGATTCTGTAATGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR TCA 90 bp AAAGCATTACAGAATCCTGGACCACTGAATACCACCATTCTCTGTTATCCTGAGGCTAAGATTGCTGGATaGCTGATAGCTTCAAGAGTT +
Preference number: 4 (lower is better)
Translates to: KALQNPGPLNTTILCYPEAKIAG*LIASRV
Trigger: AACTCTTGAAGCTATCAGTCATCCAGCAATCTTAGC...CTCAGGATAACAGAGAATGGTGGTATTCAGTGGTCCAGGATTCTGTAATGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR TCA 90 bp TTTGTAGGGTCCTTCTCATCAGCAGTTGTATTGATTCTTATGCGTTTCACCATGTACAGCTTTCTTCCATaGGTGAAGCAGAAGAGCACA +
Preference number: 4 (lower is better)
Translates to: FVGSFSSAVVLILMRFTMYSFLP*VKQKST
Trigger: TGTGCTCTTCTGCTTCACTCATGGAAGAAAGCTGTA...CATGGTGAAACGCATAAGAATCAATACAACTGCTGATGAGAAGGACCCTACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR TCA 90 bp ATGTTTTCAAGAACACCAACACACCCTCCTGTGATCTCTCTCCAAACACAGGACTACATCTACTCCACCTaGAAGTTTAACGAAACTCTT +
Preference number: 4 (lower is better)
Translates to: MFSRTPTHPPVISLQTQDYIYST*KFNETL
Trigger: AAGAGTTTCGTTAAACTTTCAGGTGGAGTAGATGTA...GTCCTGTGTTTGGAGAGAGATCACAGGAGGGTGTGTTGGTGTTCTTGAAAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461408.2
CDS-3UTR GCA 90 bp TATAACAAGGTATGTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCGAGCCCAGATGTTGCTCTTaGATACATGATGTAATTGCC +
Preference number: 4 (lower is better)
Translates to: YNKVCTLASDVSNVEVVEPRCCS*IHDVIA
Trigger: GGCAATTACATCATGTATGCAAGAGCAACATCTGGG...CTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTACATACCTTGTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR GCA 90 bp AAAGCATTACAGAATCCTGGACCACTGAATACCACCATTCTCTGTTATCCTGAGCTCACAGATAGAACCTaGACATTGCCCATTAATGCA +
Preference number: 4 (lower is better)
Translates to: KALQNPGPLNTTILCYPELTDRT*TLPINA
Trigger: TGCATTAATGGGCAATGTGCAGGTTCTATCTGTGAG...CTCAGGATAACAGAGAATGGTGGTATTCAGTGGTCCAGGATTCTGTAATGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR GCA 90 bp ATTCGCAGTGGAAAGAGTTCAGTGCATGTATCTCTTTTCAGAAAACATTTAACTAAGTGCCTACTCCACTaGACAGACCCTGTACTGGCA +
Preference number: 4 (lower is better)
Translates to: IRSGKSSVHVSLFRKHLTKCLLH*TDPVLA
Trigger: TGCCAGTACAGGGTCTGTGCAGTGGAGTAGGCACTT...AGTTAAATGTTTTCTGAAAAGAGATACATGCACTGAACTCTTTCCACTGCGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR GCA 90 bp CTGCATATAACAAGGTATGTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGACTGTAAGAAAACACTaGCTTGTGGGAAGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: LHITRYVHWQVMSPMLRWTVRKH*LVGSFL
Trigger: CAAGAAGCTTCCCACAAGGCAGTGTTTTCTTACAGT...CCACCTCAACATTGGAGACATCACTTGCCAATGTACATACCTTGTTATATGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR GCA 90 bp CTGCATATAACAAGGTATGTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGAAGCAGATTACCTCATaGAGGGAATTATTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: LHITRYVHWQVMSPMLRWKQITS*RELFWA
Trigger: AGCCCAGAATAATTCCCTGCATGAGGTAATCTGCTT...CCACCTCAACATTGGAGACATCACTTGCCAATGTACATACCTTGTTATATGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR GCA 90 bp CTGCATATAACAAGGTATGTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGCCGAAATTTCATAGTTaGCAAGGACACCAATCCCAT +
Preference number: 4 (lower is better)
Translates to: LHITRYVHWQVMSPMLRWPKFHS*QGHQSH
Trigger: ATGGGATTGGTGTCCTTGGCAACTATGAAATTTCGG...CCACCTCAACATTGGAGACATCACTTGCCAATGTACATACCTTGTTATATGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR GCA 90 bp TATAACAAGGTATGTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCGAGAGAAATGCCTTCTCATaGACAAGCCCCGAAATTTCA +
Preference number: 4 (lower is better)
Translates to: YNKVCTLASDVSNVEVVERNAFS*TSPEIS
Trigger: TGAAATTTCGGGGCTTGTGCATGAGAAGGCATTTCT...CTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTACATACCTTGTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR GCA 90 bp ATTCGCAGTGGAAAGAGTTCAGTGCATGTATCTCTTTTCAGAAAACATTTAACTTTCAAGCAAATCTCCTaGCTCTGCCTCCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: IRSGKSSVHVSLFRKHLTFKQIS*LCLPSS
Trigger: GCTACTCGGGAGGCAGAGGCAGGAGATTTGCTTGAA...AGTTAAATGTTTTCTGAAAAGAGATACATGCACTGAACTCTTTCCACTGCGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR GCA 90 bp ATTCGCAGTGGAAAGAGTTCAGTGCATGTATCTCTTTTCAGAAAACATTTAACTTTCAAGCAAATCTCCTaGCTCTGCCTCCCGGGTTCA +
Preference number: 4 (lower is better)
Translates to: IRSGKSSVHVSLFRKHLTFKQIS*LCLPGS
Trigger: TGAACCCGGGAGGCAGAGGCAGGAGATTTGCTTGAA...AGTTAAATGTTTTCTGAAAAGAGATACATGCACTGAACTCTTTCCACTGCGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CCA 90 bp TGTGTATGCCTATTACAGTCTGTGAAGTTTGGTTTAGGGTCAGATGCTGGGCAGTCTACACCAGTCATCTaGTATTTCCTCATTCTTTCA +
Preference number: 4 (lower is better)
Translates to: CVCLLQSVKFGLGSDAGQSTPVI*YFLILS
Trigger: TGAAAGAATGAGGAAATACCAGATGACTGGTGTAGA...CTGCCCAGCATCTGACCCTAAACCAAACTTCACAGACTGTAATAGGCATACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR CCA 90 bp TTCTCCACACCAATATTTGGGAAACGGAAAGGATTTGTAGGGTCCTTCTCATCATTTCCTCAGAAGTTCTaGACCATTAGCAGCATGTTC +
Preference number: 4 (lower is better)
Translates to: FSTPIFGKRKGFVGSFSSFPQKF*TISSMF
Trigger: GAACATGCTGCTAATGGTCCAGAACTTCTGAGGAAA...TGATGAGAAGGACCCTACAAATCCTTTCCGTTTCCCAAATATTGGTGTGGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR CCA 90 bp TATAACAAGGTATGTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCGAGATTCTTAGATTCTCCTaGTGTGCACTCTGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: YNKVCTLASDVSNVEVVEILRFS*CALCSR
Trigger: TCTGGAACAGAGTGCACACCAGGAGAATCTAAGAAT...CTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTACATACCTTGTTATA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CCA 90 bp CTGCATATAACAAGGTATGTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGGCATTTTCTTCCCTCTaGTTGATTTGCATCGAAGCA +
Preference number: 4 (lower is better)
Translates to: LHITRYVHWQVMSPMLRWAFSSL*LICIEA
Trigger: TGCTTCGATGCAAATCAACCAGAGGGAAGAAAATGC...CCACCTCAACATTGGAGACATCACTTGCCAATGTACATACCTTGTTATATGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CCA 90 bp ACACTGCATATCTTAATAAATCCAGCCATTAGCATGATCAGAGCAATTCCCATAACAAGGACCTTGACTTaGACTGCACTGTTTCCCAGG +
Preference number: 4 (lower is better)
Translates to: TLHILINPAISMIRAIPITRTLT*TALFPR
Trigger: CCTGGGAAACAGTGCAGTCCAAGTCAAGGTCCTTGT...TATGGGAATTGCTCTGATCATGCTAATGGCTGGATTTATTAAGATATGCAGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR CCA 90 bp ATTCGCAGTGGAAAGAGTTCAGTGCATGTATCTCTTTTCAGAAAACATTTAACTTCTCCAATGTTGAGGTaGTCGAGCCTCCTAGCCTTG +
Preference number: 4 (lower is better)
Translates to: IRSGKSSVHVSLFRKHLTSPMLR*SSLLAL
Trigger: CAAGGCTAGGAGGCTCGACCACCTCAACATTGGAGA...AGTTAAATGTTTTCTGAAAAGAGATACATGCACTGAACTCTTTCCACTGCGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CCA 90 bp TATAACAAGGTATGTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCGAGAGCATTACAGAATCCTaGACCACTGAATACCACCAT +
Preference number: 4 (lower is better)
Translates to: YNKVCTLASDVSNVEVVESITES*TTEYHH
Trigger: ATGGTGGTATTCAGTGGTCCAGGATTCTGTAATGCT...CTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTACATACCTTGTTATA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260408.8
ENST00000402627.5
3UTR CAA 72 bp CCAGATTTCGTTCTTGTTCAATTCACCTTGTCCTTGTaGGATTACCCCACACCCTATCACTTTAGTGTAGAT +
Preference number: 4 (lower is better)
Translates to: PDFVLVQFTLSL*DYPTPYHFSVD
Trigger: ATCTACACTAAAGTGATAGGGTGTGGGGTAATCCAACAAGGACAAGGTGAATTGAACAAGAACGAAATCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR CAA 72 bp CTTCCAGATTTCGTTCTTGTTCAATTCACCTTGTCCTaGTTGGATTACCCCACACCCTATCACTTTAGTGTA +
Preference number: 4 (lower is better)
Translates to: LPDFVLVQFTLS*LDYPTPYHFSV
Trigger: TACACTAAAGTGATAGGGTGTGGGGTAATCCAACAAGGACAAGGTGAATTGAACAAGAACGAAATCTGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR TCA 90 bp TTGCCCATTAATGCACACTTGTGTATGCCTATTACAGTCTGTGAAGTTTGGTTTTCTCAGACTTTGACTTaGATGCACACTGTGCTGTAC +
Preference number: 4 (lower is better)
Translates to: LPINAHLCMPITVCEVWFSQTLT*MHTVLY
Trigger: GTACAGCACAGTGTGCATTCAAGTCAAAGTCTGAGA...AAACCAAACTTCACAGACTGTAATAGGCATACACAAGTGTGCATTAATGGGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR TCA 90 bp TATGTCACAAGCTTCAATTTTTGTAATGCCCCTTCTATTTCCTGCATAGCAATATTCCCTTGCACAGTCTaGATCATCCCGACACTTCTC +
Preference number: 4 (lower is better)
Translates to: YVTSFNFCNAPSISCIAIFPCTV*IIPTLL
Trigger: GAGAAGTGTCGGGATGATTCAGACTGTGCAAGGGAA...TATTGCTATGCAGGAAATAGAAGGGGCATTACAAAAATTGAAGCTTGTGACATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR TCA 90 bp AATGCAGCAACGAAGAACAGGGAACACGGGGCACATAATAATATTCTAAGACTTAAGTTTGCCTGCAAGTaGAGAAAATGCAGCAACGAA +
Preference number: 4 (lower is better)
Translates to: NAATKNREHGAHNNILRLKFACK*RKCSNE
Trigger: TTCGTTGCTGCATTTTCTTCACTTGCAGGCAAACTT...AAGTCTTAGAATATTATTATGTGCCCCGTGTTCCCTGTTCTTCGTTGCTGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260408.8
ENST00000396136.6
ENST00000402627.5
ENST00000561288.1
CDS-3UTR TCA 90 bp AATGCAGCAACGAAGAACAGGGAACACGGGGCACATAATAATATTCTAAGACTTGTGGTAAAAGTTTATTaGGAGCCAAGTTTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: NAATKNREHGAHNNILRLVVKVY*EPSLPA
Trigger: TGCAGGCAAACTTGGCTCTCAATAAACTTTTACCAC...AAGTCTTAGAATATTATTATGTGCCCCGTGTTCCCTGTTCTTCGTTGCTGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260408.8
ENST00000402627.5
ENST00000561288.1
CDS-3UTR TCA 90 bp AAAGCATTACAGAATCCTGGACCACTGAATACCACCATTCTCTGTTATCCTGAGAATTTGCCTCCTATGTaGAGTCAGGAAAATCATAGC +
Preference number: 4 (lower is better)
Translates to: KALQNPGPLNTTILCYPENLPPM*SQENHS
Trigger: GCTATGATTTTCCTGACTTCACATAGGAGGCAAATT...CTCAGGATAACAGAGAATGGTGGTATTCAGTGGTCCAGGATTCTGTAATGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR TCA 90 bp AAAGCATTACAGAATCCTGGACCACTGAATACCACCATTCTCTGTTATCCTGAGCCTCCTGAATCTTTCTaGTCTGGTACAAAACAATGT +
Preference number: 4 (lower is better)
Translates to: KALQNPGPLNTTILCYPEPPESF*SGTKQC
Trigger: ACATTGTTTTGTACCAGATCAGAAAGATTCAGGAGG...CTCAGGATAACAGAGAATGGTGGTATTCAGTGGTCCAGGATTCTGTAATGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR TCA 90 bp GTTACGGATTCCGGAGAAGTCTGTGGTCTGGTAAATTGTATCAATCGCTTTAACAGGTCCACAATCAAGTaGCATAAGTTTTCTAAGCCT +
Preference number: 4 (lower is better)
Translates to: VTDSGEVCGLVNCINRFNRSTIK*HKFSKP
Trigger: AGGCTTAGAAAACTTATGTCACTTGATTGTGGACCT...GTTAAAGCGATTGATACAATTTACCAGACCACAGACTTCTCCGGAATCCGTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR GCA 90 bp AAAGCATTACAGAATCCTGGACCACTGAATACCACCATTCTCTGTTATCCTGAGTTTGTCCCCAGATGTTaGTCTTGCATACATGATGTA +
Preference number: 4 (lower is better)
Translates to: KALQNPGPLNTTILCYPEFVPRC*SCIHDV
Trigger: TACATCATGTATGCAAGAGCAACATCTGGGGACAAA...CTCAGGATAACAGAGAATGGTGGTATTCAGTGGTCCAGGATTCTGTAATGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR GCA 90 bp ATGTGGGGATCCAAAGTTATGTCCAACTTCGTGAGCAAAAGTAATGTGAGAGACTTTGTCCCCAGATGTTaGTCTTGCATACATGATGTA +
Preference number: 4 (lower is better)
Translates to: MWGSKVMSNFVSKSNVRDFVPRC*SCIHDV
Trigger: TACATCATGTATGCAAGAGCAACATCTGGGGACAAA...GTCTCTCACATTACTTTTGCTCACGAAGTTGGACATAACTTTGGATCCCCACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR GCA 90 bp TATAACAAGGTATGTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCGAGATAGAACCTGCACATTaGCCATTAATGCACACTTGT +
Preference number: 4 (lower is better)
Translates to: YNKVCTLASDVSNVEVVEIEPAH*PLMHTC
Trigger: ACAAGTGTGCATTAATGGGCAATGTGCAGGTTCTAT...CTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTACATACCTTGTTATA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR GCA 90 bp TATAACAAGGTATGTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCGAGCTGCTATGTCCAGTTTaGACAACACTTAACTGTGTT +
Preference number: 4 (lower is better)
Translates to: YNKVCTLASDVSNVEVVELLCPV*TTLNCV
Trigger: AACACAGTTAAGTGTTGTGCAAACTGGACATAGCAG...CTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTACATACCTTGTTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR GCA 90 bp AAAGCATTACAGAATCCTGGACCACTGAATACCACCATTCTCTGTTATCCTGAGGACTTTTGGCAGAACTaGTTCATAGGTGGTATATGT +
Preference number: 4 (lower is better)
Translates to: KALQNPGPLNTTILCYPEDFWQN*FIGGIC
Trigger: ACATATACCACCTATGAAGCAGTTCTGCCAAAAGTC...CTCAGGATAACAGAGAATGGTGGTATTCAGTGGTCCAGGATTCTGTAATGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR GCA 90 bp AATGCAGCAACGAAGAACAGGGAACACGGGGCACATAATAATATTCTAAGACTTGGGGCTGTGAAAAATTaGAGCAGGTTGATAAGTGAA +
Preference number: 4 (lower is better)
Translates to: NAATKNREHGAHNNILRLGAVKN*SRLISE
Trigger: TTCACTTATCAACCTGCTGCAATTTTTCACAGCCCC...AAGTCTTAGAATATTATTATGTGCCCCGTGTTCCCTGTTCTTCGTTGCTGCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CCA 90 bp AATGCAGCAACGAAGAACAGGGAACACGGGGCACATAATAATATTCTAAGACTTGCACGCTGGTGTTTTTaGTGTAATGAATCCACATTG +
Preference number: 4 (lower is better)
Translates to: NAATKNREHGAHNNILRLARWCF*CNESTL
Trigger: CAATGTGGATTCATTACACCAAAAACACCAGCGTGC...AAGTCTTAGAATATTATTATGTGCCCCGTGTTCCCTGTTCTTCGTTGCTGCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CCA 90 bp AATGCAGCAACGAAGAACAGGGAACACGGGGCACATAATAATATTCTAAGACTTGCTCTTTTGGCACGCTaGTGTTTTTGGTGTAATGAA +
Preference number: 4 (lower is better)
Translates to: NAATKNREHGAHNNILRLALLAR*CFWCNE
Trigger: TTCATTACACCAAAAACACCAGCGTGCCAAAAGAGC...AAGTCTTAGAATATTATTATGTGCCCCGTGTTCCCTGTTCTTCGTTGCTGCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CCA 90 bp TTCTTATCATCTAGCCAAGGCCCTGGCACAATCAAGTGCCTAAGAAGTATCTGTTGTCTTCCATGGGCATaGAAATCTAGACGTAAAAAT +
Preference number: 4 (lower is better)
Translates to: FLSSSQGPGTIKCLRSICCLPWA*KSRRKN
Trigger: ATTTTTACGTCTAGATTTCCATGCCCATGGAAGACA...ACAGATACTTCTTAGGCACTTGATTGTGCCAGGGCCTTGGCTAGATGATAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CCA 90 bp AAAGCATTACAGAATCCTGGACCACTGAATACCACCATTCTCTGTTATCCTGAGTTCCGGAGAAGTCTGTaGTCTGGTAAATTGTATCAA +
Preference number: 4 (lower is better)
Translates to: KALQNPGPLNTTILCYPEFRRSL*SGKLYQ
Trigger: TTGATACAATTTACCAGACCACAGACTTCTCCGGAA...CTCAGGATAACAGAGAATGGTGGTATTCAGTGGTCCAGGATTCTGTAATGCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CCA 90 bp GTTACGGATTCCGGAGAAGTCTGTGGTCTGGTAAATTGTATCAATCGCTTTAACTTCCGGAGAAGTCTGTaGTCTGGTAAATTGTATCAA +
Preference number: 4 (lower is better)
Translates to: VTDSGEVCGLVNCINRFNFRRSL*SGKLYQ
Trigger: TTGATACAATTTACCAGACCACAGACTTCTCCGGAA...GTTAAAGCGATTGATACAATTTACCAGACCACAGACTTCTCCGGAATCCGTAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR CCA 90 bp CTGCATATAACAAGGTATGTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGCTCCACACCAATATTTaGGAAACGGAAAGGATTTGT +
Preference number: 4 (lower is better)
Translates to: LHITRYVHWQVMSPMLRWLHTNI*ETERIC
Trigger: ACAAATCCTTTCCGTTTCCCAAATATTGGTGTGGAG...CCACCTCAACATTGGAGACATCACTTGCCAATGTACATACCTTGTTATATGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CCA 90 bp GTTACGGATTCCGGAGAAGTCTGTGGTCTGGTAAATTGTATCAATCGCTTTAACCTCCACACCAATATTTaGGAAACGGAAAGGATTTGT +
Preference number: 4 (lower is better)
Translates to: VTDSGEVCGLVNCINRFNLHTNI*ETERIC
Trigger: ACAAATCCTTTCCGTTTCCCAAATATTGGTGTGGAG...GTTAAAGCGATTGATACAATTTACCAGACCACAGACTTCTCCGGAATCCGTAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR CCA 90 bp AATGCAGCAACGAAGAACAGGGAACACGGGGCACATAATAATATTCTAAGACTTATTCTTAGATTCTCCTaGTGTGCACTCTGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: NAATKNREHGAHNNILRLILRFS*CALCSR
Trigger: TCTGGAACAGAGTGCACACCAGGAGAATCTAAGAAT...AAGTCTTAGAATATTATTATGTGCCCCGTGTTCCCTGTTCTTCGTTGCTGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260408.8
ENST00000396136.6
CDS-3UTR CCA 90 bp AATGCAGCAACGAAGAACAGGGAACACGGGGCACATAATAATATTCTAAGACTTGAAAACACTGCCTTGTaGGAAGCTTCTTGTGATAGT +
Preference number: 4 (lower is better)
Translates to: NAATKNREHGAHNNILRLENTAL*EASCDS
Trigger: ACTATCACAAGAAGCTTCCCACAAGGCAGTGTTTTC...AAGTCTTAGAATATTATTATGTGCCCCGTGTTCCCTGTTCTTCGTTGCTGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CCA 90 bp AAAGCATTACAGAATCCTGGACCACTGAATACCACCATTCTCTGTTATCCTGAGGGAGAAAGAGGAAAATaGTTAACAGGTCACTTCACT +
Preference number: 4 (lower is better)
Translates to: KALQNPGPLNTTILCYPEGERGK*LTGHFT
Trigger: AGTGAAGTGACCTGTTAACCATTTTCCTCTTTCTCC...CTCAGGATAACAGAGAATGGTGGTATTCAGTGGTCCAGGATTCTGTAATGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR TCA 90 bp AAGGTAACTGGTCAATGCATATCAGCAAATGCATACCATAAAAGCCAAAGAATTGTACAACAAGGACCTTaGCTTGGACTGCACTGTTTC +
Preference number: 4 (lower is better)
Translates to: KVTGQCISANAYHKSQRIVQQGP*LGLHCF
Trigger: GAAACAGTGCAGTCCAAGTCAAGGTCCTTGTTGTAC...AATTCTTTGGCTTTTATGGTATGCATTTGCTGATATGCATTGACCAGTTACCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR TCA 90 bp AATGCAGCAACGAAGAACAGGGAACACGGGGCACATAATAATATTCTAAGACTTCTACATCATGAACTCTaGAGTAGTATGTGCTGCTAT +
Preference number: 4 (lower is better)
Translates to: NAATKNREHGAHNNILRLLHHEL*SSMCCY
Trigger: ATAGCAGCACATACTACTTCAGAGTTCATGATGTAG...AAGTCTTAGAATATTATTATGTGCCCCGTGTTCCCTGTTCTTCGTTGCTGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR TCA 90 bp CTGCATATAACAAGGTATGTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTATATTACCACATCTTaGTTCGCAGTGGAAAGAGTT +
Preference number: 4 (lower is better)
Translates to: LHITRYVHWQVMSPMLRWYITTS*FAVERV
Trigger: AACTCTTTCCACTGCGAATCAAGATGTGGTAATATA...CCACCTCAACATTGGAGACATCACTTGCCAATGTACATACCTTGTTATATGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR TCA 90 bp ATTCGCAGTGGAAAGAGTTCAGTGCATGTATCTCTTTTCAGAAAACATTTAACTCTTCCCCAAACTGCATaGCATTGCTTGACACTACAG +
Preference number: 4 (lower is better)
Translates to: IRSGKSSVHVSLFRKHLTLPQTA*HCLTLQ
Trigger: CTGTAGTGTCAAGCAATGTCATGCAGTTTGGGGAAG...AGTTAAATGTTTTCTGAAAAGAGATACATGCACTGAACTCTTTCCACTGCGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR TCA 90 bp AATGCAGCAACGAAGAACAGGGAACACGGGGCACATAATAATATTCTAAGACTTTTAATGTGGATAAGCTaGCCATACTCCTTGACATGT +
Preference number: 4 (lower is better)
Translates to: NAATKNREHGAHNNILRLLMWIS*PYSLTC
Trigger: ACATGTCAAGGAGTATGGTCAGCTTATCCACATTAA...AAGTCTTAGAATATTATTATGTGCCCCGTGTTCCCTGTTCTTCGTTGCTGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR GCA 90 bp AAAGCATTACAGAATCCTGGACCACTGAATACCACCATTCTCTGTTATCCTGAGAAAATCAGCTATCAGTaGCCAGTATATAACCAATCG +
Preference number: 4 (lower is better)
Translates to: KALQNPGPLNTTILCYPEKISYQ*PVYNQS
Trigger: CGATTGGTTATATACTGGGCACTGATAGCTGATTTT...CTCAGGATAACAGAGAATGGTGGTATTCAGTGGTCCAGGATTCTGTAATGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR GCA 90 bp ATTCGCAGTGGAAAGAGTTCAGTGCATGTATCTCTTTTCAGAAAACATTTAACTCCTCTGTACTGTAACTaGTGGTTTCTTTCCTTCCGC +
Preference number: 4 (lower is better)
Translates to: IRSGKSSVHVSLFRKHLTPLYCN*WFLSFR
Trigger: GCGGAAGGAAAGAAACCAGCAGTTACAGTACAGAGG...AGTTAAATGTTTTCTGAAAAGAGATACATGCACTGAACTCTTTCCACTGCGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR GCA 90 bp AATGCAGCAACGAAGAACAGGGAACACGGGGCACATAATAATATTCTAAGACTTGAGTTGTTACTTACATaGCCCAAAGCTAAGTTATGC +
Preference number: 4 (lower is better)
Translates to: NAATKNREHGAHNNILRLELLLT*PKAKLC
Trigger: GCATAACTTAGCTTTGGGGCATGTAAGTAACAACTC...AAGTCTTAGAATATTATTATGTGCCCCGTGTTCCCTGTTCTTCGTTGCTGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CCA 90 bp ATTCGCAGTGGAAAGAGTTCAGTGCATGTATCTCTTTTCAGAAAACATTTAACTGTGAGACTGCTCTTTTaGCACGCTGGTGTTTTTGGT +
Preference number: 4 (lower is better)
Translates to: IRSGKSSVHVSLFRKHLTVRLLF*HAGVFG
Trigger: ACCAAAAACACCAGCGTGCCAAAAGAGCAGTCTCAC...AGTTAAATGTTTTCTGAAAAGAGATACATGCACTGAACTCTTTCCACTGCGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CCA 90 bp AAAGCATTACAGAATCCTGGACCACTGAATACCACCATTCTCTGTTATCCTGAGAATATATCTCTCTGCTaGCTCAACATAAAATGTGCC +
Preference number: 4 (lower is better)
Translates to: KALQNPGPLNTTILCYPENISLC*LNIKCA
Trigger: GGCACATTTTATGTTGAGCCAGCAGAGAGATATATT...CTCAGGATAACAGAGAATGGTGGTATTCAGTGGTCCAGGATTCTGTAATGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CCA 90 bp TTCCAGAAACTTCTCCACACCAATATTTGGGAAACGGAAAGGATTTGTAGGGTCAATATATCTCTCTGCTaGCTCAACATAAAATGTGCC +
Preference number: 4 (lower is better)
Translates to: FQKLLHTNIWETERICRVNISLC*LNIKCA
Trigger: GGCACATTTTATGTTGAGCCAGCAGAGAGATATATT...GACCCTACAAATCCTTTCCGTTTCCCAAATATTGGTGTGGAGAAGTTTCTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR CCA 90 bp TTCTCCACACCAATATTTGGGAAACGGAAAGGATTTGTAGGGTCCTTCTCATCAAATGACAGAGTGAAATaGCAGAGTTCGGTCTTTAAT +
Preference number: 4 (lower is better)
Translates to: FSTPIFGKRKGFVGSFSSNDRVK*QSSVFN
Trigger: ATTAAAGACCGAACTCTGCCATTTCACTCTGTCATT...TGATGAGAAGGACCCTACAAATCCTTTCCGTTTCCCAAATATTGGTGTGGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR CCA 90 bp ATTCGCAGTGGAAAGAGTTCAGTGCATGTATCTCTTTTCAGAAAACATTTAACTCTTTGCCATCAGAACTaGCACACGTACACTCCTCTA +
Preference number: 4 (lower is better)
Translates to: IRSGKSSVHVSLFRKHLTLCHQN*HTYTPL
Trigger: TAGAGGAGTGTACGTGTGCCAGTTCTGATGGCAAAG...AGTTAAATGTTTTCTGAAAAGAGATACATGCACTGAACTCTTTCCACTGCGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CCA 90 bp TATAACAAGGTATGTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCGAGTGCAGGGAATTATTCTaGGCTTACAATTCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: YNKVCTLASDVSNVEVVECRELF*AYNSFS
Trigger: AGAAAAGGAATTGTAAGCCCAGAATAATTCCCTGCA...CTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTACATACCTTGTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CCA 90 bp TATGTCACAAGCTTCAATTTTTGTAATGCCCCTTCTATTTCCTGCATAGCAATATCACCTTGTCCTTGTTaGATTACCCCACACCCTATC +
Preference number: 4 (lower is better)
Translates to: YVTSFNFCNAPSISCIAISPCPC*ITPHPI
Trigger: GATAGGGTGTGGGGTAATCCAACAAGGACAAGGTGA...TATTGCTATGCAGGAAATAGAAGGGGCATTACAAAAATTGAAGCTTGTGACATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CCA 90 bp TTCTTATCATCTAGCCAAGGCCCTGGCACAATCAAGTGCCTAAGAAGTATCTGTAGCATGTATCACAGCTaGAATTGTACATTTATTCAC +
Preference number: 4 (lower is better)
Translates to: FLSSSQGPGTIKCLRSICSMYHS*NCTFIH
Trigger: GTGAATAAATGTACAATTCCAGCTGTGATACATGCT...ACAGATACTTCTTAGGCACTTGATTGTGCCAGGGCCTTGGCTAGATGATAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR CAA 72 bp ACTGTGACAAACACGAAGTACCCAAAGCATAAAGTGTaGAAGACACCTCACAAAACAAGACTGATCAGAGAA +
Preference number: 4 (lower is better)
Translates to: TVTNTKYPKHKV*KTPHKTRLIRE
Trigger: TTCTCTGATCAGTCTTGTTTTGTGAGGTGTCTTCAACACTTTATGCTTTGGGTACTTCGTGTTTGTCACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR CAA 72 bp GCTGCTTTAAAACTACATCTGGCTTGCACCCTGGTTTaGGGAAACCTTGACCCTTTAAATATGGATAATGAA +
Preference number: 4 (lower is better)
Translates to: AALKLHLACTLV*GNLDPLNMDNE
Trigger: TTCATTATCCATATTTAAAGGGTCAAGGTTTCCCAAAACCAGGGTGCAAGCCAGATGTAGTTTTAAAGCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR CAA 72 bp ACAGATAGAACCTGCACATTGCCCATTAATGCACACTaGTGTATGCCTATTACAGTCTGTGAAGTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: TDRTCTLPINAH*CMPITVCEVWF
Trigger: AAACCAAACTTCACAGACTGTAATAGGCATACACAAGTGTGCATTAATGGGCAATGTGCAGGTTCTATCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR TCA 90 bp TATGTCACAAGCTTCAATTTTTGTAATGCCCCTTCTATTTCCTGCATAGCAATACACCACGAGTCTGGATaGATCCTTCAAATCTTCCAT +
Preference number: 4 (lower is better)
Translates to: YVTSFNFCNAPSISCIAIHHESG*ILQIFH
Trigger: ATGGAAGATTTGAAGGATTCATCCAGACTCGTGGTG...TATTGCTATGCAGGAAATAGAAGGGGCATTACAAAAATTGAAGCTTGTGACATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR TCA 90 bp AAGGTAACTGGTCAATGCATATCAGCAAATGCATACCATAAAAGCCAAAGAATTTTTCTTCCCTCTGGTTaGTTTGCATCGAAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: KVTGQCISANAYHKSQRIFLPSG*FASKQH
Trigger: ATGCTGCTTCGATGCAAATCAACCAGAGGGAAGAAA...AATTCTTTGGCTTTTATGGTATGCATTTGCTGATATGCATTGACCAGTTACCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR TCA 90 bp TATGTCACAAGCTTCAATTTTTGTAATGCCCCTTCTATTTCCTGCATAGCAATAACACTTCTCAGACTTTaGCTTGAATGCACACTGTGC +
Preference number: 4 (lower is better)
Translates to: YVTSFNFCNAPSISCIAITLLRL*LECTLC
Trigger: GCACAGTGTGCATTCAAGTCAAAGTCTGAGAAGTGT...TATTGCTATGCAGGAAATAGAAGGGGCATTACAAAAATTGAAGCTTGTGACATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR TCA 90 bp AGCAAGAATAAAATGATGCAGCTGGTCCTAGAACACACCGGAAATAAAAATCGTAGGAAAACGATTTGTTaGAAGCCACGTTTAGAACAG +
Preference number: 4 (lower is better)
Translates to: SKNKMMQLVLEHTGNKNRRKTIC*KPRLEQ
Trigger: CTGTTCTAAACGTGGCTTTCAACAAATCGTTTTCCT...ACGATTTTTATTTCCGGTGTGTTCTAGGACCAGCTGCATCATTTTATTCTTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000461408.2
CDS-3UTR GCA 90 bp ATTCGCAGTGGAAAGAGTTCAGTGCATGTATCTCTTTTCAGAAAACATTTAACTCTTGAATGCACACTGTaGTGTACAACAAGGACCTTG +
Preference number: 4 (lower is better)
Translates to: IRSGKSSVHVSLFRKHLTLECTL*CTTRTL
Trigger: CAAGGTCCTTGTTGTACAGCACAGTGTGCATTCAAG...AGTTAAATGTTTTCTGAAAAGAGATACATGCACTGAACTCTTTCCACTGCGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR GCA 90 bp AAAGCATTACAGAATCCTGGACCACTGAATACCACCATTCTCTGTTATCCTGAGATTTCCTTAAATAAATaGTTCCCCAAACTGCATGAC +
Preference number: 4 (lower is better)
Translates to: KALQNPGPLNTTILCYPEISLNK*FPKLHD
Trigger: GTCATGCAGTTTGGGGAAGCATTTATTTAAGGAAAT...CTCAGGATAACAGAGAATGGTGGTATTCAGTGGTCCAGGATTCTGTAATGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR GCA 90 bp CTGCATATAACAAGGTATGTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTTAAGTGTTTCAATTTaGATCTCTAAAAGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: LHITRYVHWQVMSPMLRWLSVSI*ISKRGP
Trigger: AGGACCCCTTTTAGAGATGCAAATTGAAACACTTAA...CCACCTCAACATTGGAGACATCACTTGCCAATGTACATACCTTGTTATATGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR GCA 90 bp AAGGTAACTGGTCAATGCATATCAGCAAATGCATACCATAAAAGCCAAAGAATTACTACCTACCTACCATaGTCGATATGCACTTCCTCT +
Preference number: 4 (lower is better)
Translates to: KVTGQCISANAYHKSQRITTYLP*SICTSS
Trigger: AGAGGAAGTGCATATCGAGCATGGTAGGTAGGTAGT...AATTCTTTGGCTTTTATGGTATGCATTTGCTGATATGCATTGACCAGTTACCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CCA 90 bp AATGCAGCAACGAAGAACAGGGAACACGGGGCACATAATAATATTCTAAGACTTTCAATAACAGACCCATaGCTAAAACTTCCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: NAATKNREHGAHNNILRLSITDP*LKLPSS
Trigger: TGAAGAAGGAAGTTTTAGCCATGGGTCTGTTATTGA...AAGTCTTAGAATATTATTATGTGCCCCGTGTTCCCTGTTCTTCGTTGCTGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260408.8
ENST00000396136.6
CDS-3UTR CCA 90 bp TTCCAGAAACTTCTCCACACCAATATTTGGGAAACGGAAAGGATTTGTAGGGTCCTTTGGATTACTACTTaGAGTATGAACACTGCATAT +
Preference number: 4 (lower is better)
Translates to: FQKLLHTNIWETERICRVLWITT*SMNTAY
Trigger: ATATGCAGTGTTCATACTCCAAGTAGTAATCCAAAG...GACCCTACAAATCCTTTCCGTTTCCCAAATATTGGTGTGGAGAAGTTTCTGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR CCA 90 bp TATAACAAGGTATGTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCGAGTCCCTTGAAGAAAAATaGTACTTAAGAGACCACAAT +
Preference number: 4 (lower is better)
Translates to: YNKVCTLASDVSNVEVVESLEEK*YLRDHN
Trigger: ATTGTGGTCTCTTAAGTACCATTTTTCTTCAAGGGA...CTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTACATACCTTGTTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260408.8
3UTR CAA 72 bp AATACTATGAGTTTCAATCTCTTGCAGATATTATCCTaGCTGATGCTAAAGTTATCTCAGCCTTGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: NTMSFNLLQILS*LMLKLSQPWPV
Trigger: CACTGGCCAAGGCTGAGATAACTTTAGCATCAGCAAGGATAATATCTGCAAGAGATTGAAACTCATAGTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR TCA 90 bp AAGGTAACTGGTCAATGCATATCAGCAAATGCATACCATAAAAGCCAAAGAATTTCAATCGCTTTAACATaGCTGGATATCTGGGCAATC +
Preference number: 4 (lower is better)
Translates to: KVTGQCISANAYHKSQRISIALT*LDIWAI
Trigger: GATTGCCCAGATATCCAGTCATGTTAAAGCGATTGA...AATTCTTTGGCTTTTATGGTATGCATTTGCTGATATGCATTGACCAGTTACCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR TCA 90 bp AAGGTAACTGGTCAATGCATATCAGCAAATGCATACCATAAAAGCCAAAGAATTCATCATGATGAGATGTaGCTTTTGGCAGAACTGCTT +
Preference number: 4 (lower is better)
Translates to: KVTGQCISANAYHKSQRIHHDEM*LLAELL
Trigger: AAGCAGTTCTGCCAAAAGTCACATCTCATCATGATG...AATTCTTTGGCTTTTATGGTATGCATTTGCTGATATGCATTGACCAGTTACCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR TCA 90 bp ATTCGCAGTGGAAAGAGTTCAGTGCATGTATCTCTTTTCAGAAAACATTTAACTGAGAATAACCAAGTATaGCACCTGCCAAAGTACAAG +
Preference number: 4 (lower is better)
Translates to: IRSGKSSVHVSLFRKHLTENNQV*HLPKYK
Trigger: CTTGTACTTTGGCAGGTGTCATACTTGGTTATTCTC...AGTTAAATGTTTTCTGAAAAGAGATACATGCACTGAACTCTTTCCACTGCGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR GCA 90 bp AAGGTAACTGGTCAATGCATATCAGCAAATGCATACCATAAAAGCCAAAGAATTATGACGACAGTCAACTaGCCCATGGTTACATCATTT +
Preference number: 4 (lower is better)
Translates to: KVTGQCISANAYHKSQRIMTTVN*PMVTSF
Trigger: AAATGATGTAACCATGGGGCAGTTGACTGTCGTCAT...AATTCTTTGGCTTTTATGGTATGCATTTGCTGATATGCATTGACCAGTTACCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CCA 90 bp AAGGTAACTGGTCAATGCATATCAGCAAATGCATACCATAAAAGCCAAAGAATTTTTCCTCAGAAGTTCTaGACCATTAGCAGCATGTTC +
Preference number: 4 (lower is better)
Translates to: KVTGQCISANAYHKSQRIFPQKF*TISSMF
Trigger: GAACATGCTGCTAATGGTCCAGAACTTCTGAGGAAA...AATTCTTTGGCTTTTATGGTATGCATTTGCTGATATGCATTGACCAGTTACCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CCA 90 bp AAGGTAACTGGTCAATGCATATCAGCAAATGCATACCATAAAAGCCAAAGAATTCATCTTGATTCGCAGTaGAAAGAGTTCAGTGCATGT +
Preference number: 4 (lower is better)
Translates to: KVTGQCISANAYHKSQRIHLDSQ*KEFSAC
Trigger: ACATGCACTGAACTCTTTCCACTGCGAATCAAGATG...AATTCTTTGGCTTTTATGGTATGCATTTGCTGATATGCATTGACCAGTTACCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CCA 90 bp AATGCAGCAACGAAGAACAGGGAACACGGGGCACATAATAATATTCTAAGACTTCGCAGAGTATCTAACTaGAAATTTTCTACATGGATT +
Preference number: 4 (lower is better)
Translates to: NAATKNREHGAHNNILRLRRVSN*KFSTWI
Trigger: AATCCATGTAGAAAATTTCCAGTTAGATACTCTGCG...AAGTCTTAGAATATTATTATGTGCCCCGTGTTCCCTGTTCTTCGTTGCTGCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CCA 90 bp ATTCGCAGTGGAAAGAGTTCAGTGCATGTATCTCTTTTCAGAAAACATTTAACTCGTGGTAGTATAACTTaGTACATCTATCTGGGAGAC +
Preference number: 4 (lower is better)
Translates to: IRSGKSSVHVSLFRKHLTRGSIT*YIYLGD
Trigger: GTCTCCCAGATAGATGTACCAAGTTATACTACCACG...AGTTAAATGTTTTCTGAAAAGAGATACATGCACTGAACTCTTTCCACTGCGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR TCA 90 bp ATTCGCAGTGGAAAGAGTTCAGTGCATGTATCTCTTTTCAGAAAACATTTAACTCAGGTTTGTAATGCTTaGCACTCTGATACCTTCAAT +
Preference number: 4 (lower is better)
Translates to: IRSGKSSVHVSLFRKHLTQVCNA*HSDTFN
Trigger: ATTGAAGGTATCAGAGTGTCAAGCATTACAAACCTG...AGTTAAATGTTTTCTGAAAAGAGATACATGCACTGAACTCTTTCCACTGCGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR TCA 90 bp ATTCGCAGTGGAAAGAGTTCAGTGCATGTATCTCTTTTCAGAAAACATTTAACTTTTGTGCCTATCTTGTaGAATCAGCTTCATTGCCTA +
Preference number: 4 (lower is better)
Translates to: IRSGKSSVHVSLFRKHLTFVPIL*NQLHCL
Trigger: TAGGCAATGAAGCTGATTTCACAAGATAGGCACAAA...AGTTAAATGTTTTCTGAAAAGAGATACATGCACTGAACTCTTTCCACTGCGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CCA 90 bp AAGGTAACTGGTCAATGCATATCAGCAAATGCATACCATAAAAGCCAAAGAATTGTAGTTTGCTCCGCTTaGACAAATCAGATTTCACTA +
Preference number: 4 (lower is better)
Translates to: KVTGQCISANAYHKSQRIVVCSA*TNQISL
Trigger: TAGTGAAATCTGATTTGTCCAAGCGGAGCAAACTAC...AATTCTTTGGCTTTTATGGTATGCATTTGCTGATATGCATTGACCAGTTACCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CCA 90 bp TATGTCACAAGCTTCAATTTTTGTAATGCCCCTTCTATTTCCTGCATAGCAATAATGAGATGTGACTTTTaGCAGAACTGCTTCATAGGT +
Preference number: 4 (lower is better)
Translates to: YVTSFNFCNAPSISCIAIMRCDF*QNCFIG
Trigger: ACCTATGAAGCAGTTCTGCCAAAAGTCACATCTCAT...TATTGCTATGCAGGAAATAGAAGGGGCATTACAAAAATTGAAGCTTGTGACATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CCA 90 bp AAGGTAACTGGTCAATGCATATCAGCAAATGCATACCATAAAAGCCAAAGAATTTCTAGACGTAAAAATTaGTCTTCATGTGAGACTGCT +
Preference number: 4 (lower is better)
Translates to: KVTGQCISANAYHKSQRISRRKN*SSCETA
Trigger: AGCAGTCTCACATGAAGACCAATTTTTACGTCTAGA...AATTCTTTGGCTTTTATGGTATGCATTTGCTGATATGCATTGACCAGTTACCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CCA 90 bp ATTCGCAGTGGAAAGAGTTCAGTGCATGTATCTCTTTTCAGAAAACATTTAACTAATGACAGAGTGAAATaGCAGAGTTCGGTCTTTAAT +
Preference number: 4 (lower is better)
Translates to: IRSGKSSVHVSLFRKHLTNDRVK*QSSVFN
Trigger: ATTAAAGACCGAACTCTGCCATTTCACTCTGTCATT...AGTTAAATGTTTTCTGAAAAGAGATACATGCACTGAACTCTTTCCACTGCGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CCA 90 bp AAGGTAACTGGTCAATGCATATCAGCAAATGCATACCATAAAAGCCAAAGAATTTCTACACCAGTCATCTaGTATTTCCTCATTCTTTCA +
Preference number: 4 (lower is better)
Translates to: KVTGQCISANAYHKSQRISTPVI*YFLILS
Trigger: TGAAAGAATGAGGAAATACCAGATGACTGGTGTAGA...AATTCTTTGGCTTTTATGGTATGCATTTGCTGATATGCATTGACCAGTTACCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CCA 90 bp ATTCGCAGTGGAAAGAGTTCAGTGCATGTATCTCTTTTCAGAAAACATTTAACTTTTCCACAAATAGGTTaGCCAGATTCAACAAAACAG +
Preference number: 4 (lower is better)
Translates to: IRSGKSSVHVSLFRKHLTFPQIG*PDSTKQ
Trigger: CTGTTTTGTTGAATCTGGCCAACCTATTTGTGGAAA...AGTTAAATGTTTTCTGAAAAGAGATACATGCACTGAACTCTTTCCACTGCGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR GCA 90 bp ATTCGCAGTGGAAAGAGTTCAGTGCATGTATCTCTTTTCAGAAAACATTTAACTGTTGTCTTTTCTCTTTaGATTTCTGTTGTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: IRSGKSSVHVSLFRKHLTVVFSL*ISVVEA
Trigger: TGCTTCAACAACAGAAATGCAAAGAGAAAAGACAAC...AGTTAAATGTTTTCTGAAAAGAGATACATGCACTGAACTCTTTCCACTGCGAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS CCA 90 bp GAAGGGGCTTGGTCCGGAGCCTCCACGGGAAGCCGGGACCTCCCCTaGCAGGAGAAACGGCGAAGCACCTCCCTCTCGCTCCACTTCAGG +
Preference number: 5 (lower is better)
Translates to: EGAWSGASTGSRDLP*QEKRRSTSLSLHFR
Trigger: CCTGAAGTGGAGCGAGAGGGAGGTGCTTCGCCGTTTCTCCTGCCAGGGGAGGTCCCGGCTTCCCGTGGAGGCTCCGGACCAAGCCCCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000260408.8
ENST00000439637.5
ENST00000461408.2
ENST00000558004.1
ENST00000558733.5
ENST00000560608.5
ENST00000561149.1
ENST00000561288.1
CDS TCA 90 bp CCTCCTCACGGGTTAACAGCAGCACATCGATCCGGAGGGAGAAGCTaGAGGGGCTTGGTCCGGAGCCTCCACGGGAAGCCGGGACCTCCC +
Preference number: 5 (lower is better)
Translates to: PPHGLTAAHRSGGRS*RGLVRSLHGKPGPP
Trigger: GGGAGGTCCCGGCTTCCCGTGGAGGCTCCGGACCAAGCCCCTTCAGCTTCTCCCTCCGGATCGATGTGCTGCTGTTAACCCGTGAGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260408.8
ENST00000439637.5
ENST00000461408.2
ENST00000558004.1
ENST00000558733.5
ENST00000560608.5
ENST00000561149.1
ENST00000561288.1
CDS CCA 90 bp GCGGGTGATGACTGCTGCCACTCCACGGGCGGCCCCTCTGCAGAATaGGGTCGGTCAGGACCGGCGCGCCGGGTAAAGAACAATACACGA +
Preference number: 5 (lower is better)
Translates to: AGDDCCHSTGGPSAE*GRSGPARRVKNNTR
Trigger: TCGTGTATTGTTCTTTACCCGGCGCGCCGGTCCTGACCGACCCCATTCTGCAGAGGGGCCGCCCGTGGAGTGGCAGCAGTCATCACCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461408.2
ENST00000497846.5
CDS GCA 90 bp ACAATACACGAGCCCAGCTGCAAACAACACAACTTCCCACGAGTCTaGGCGGCGGGTCTCGGCGGCGGAGAGGACTTCGGAATCCGCCAC +
Preference number: 5 (lower is better)
Translates to: TIHEPSCKQHNFPRV*AAGLGGGEDFGIRH
Trigger: GTGGCGGATTCCGAAGTCCTCTCCGCCGCCGAGACCCGCCGCGCAGACTCGTGGGAAGTTGTGTTGTTTGCAGCTGGGCTCGTGTATTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461408.2
CDS-3UTR CAA 90 bp GCTCCAACCCAAGCCAGACCAAGTACGCCATCATCAAAATCTCGGTCTGTGAAGCCGCTGACGCTGGGGTaGCTGAATGGGCTGTGGAGG +
Preference number: 5 (lower is better)
Translates to: APTQARPSTPSSKSRSVKPLTLG*LNGLWR
Trigger: CCTCCACAGCCCATTCAGCAACCCCAGCGTCAGCGG...CTTCACAGACCGAGATTTTGATGATGGCGTACTTGGTCTGGCTTGGGTTGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS GCA 90 bp CCAGGTTGCAGGGTGATGGTTCGACCACTGAAGTGCCTACTCCACTaGACAGACCCTGTACTGGCACAAGTTGATGGGTCCACTGGAAAA +
Preference number: 5 (lower is better)
Translates to: PGCRVMVRPLKCLLH*TDPVLAQVDGSTGK
Trigger: TTTTCCAGTGGACCCATCAACTTGTGCCAGTACAGGGTCTGTGCAGTGGAGTAGGCACTTCAGTGGTCGAACCATCACCCTGCAACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482945.5
CDS-3UTR CAA 90 bp GTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCGAGCCTCCTAGCCTTGGTGATGTCTCCAATGTaGAGGTGGTCGAGCCTCCTA +
Preference number: 5 (lower is better)
Translates to: VHWQVMSPMLRWSSLLALVMSPM*RWSSLL
Trigger: TAGGAGGCTCGACCACCTCAACATTGGAGACATCAC...CAAGGCTAGGAGGCTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260408.8
ENST00000402627.5
CDS-3UTR CAA 90 bp ATCTCGGTCTGTGAAGACATAGGCCAAACAGTAGTCATCATGATTCTGCTCAGAGCAAGGGGATCCAGGTaGCAGGGTGATGGTTCGACC +
Preference number: 5 (lower is better)
Translates to: ISVCEDIGQTVVIMILLRARGSR*QGDGST
Trigger: GGTCGAACCATCACCCTGCAACCTGGATCCCCTTGC...TCTGAGCAGAATCATGATGACTACTGTTTGGCCTATGTCTTCACAGACCGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR CAA 90 bp GATCCAGGTTGCAGGGTGATGGTTCGACCACTGAAGTGCCTACTCCACTGCACACCTCCCACCCCCAAATaGGAATTTTCAGGCTTTAAA +
Preference number: 5 (lower is better)
Translates to: DPGCRVMVRPLKCLLHCTPPTPK*EFSGFK
Trigger: TTTAAAGCCTGAAAATTCCAATTTGGGGGTGGGAGG...TGTGCAGTGGAGTAGGCACTTCAGTGGTCGAACCATCACCCTGCAACCTGGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR CAA 90 bp AAAGCATTACAGAATCCTGGACCACTGAATACCACCATTCTCTGTTATCCTGAGGCAAGGGGATCCAGGTaGCAGGGTGATGGTTCGACC +
Preference number: 5 (lower is better)
Translates to: KALQNPGPLNTTILCYPEARGSR*QGDGST
Trigger: GGTCGAACCATCACCCTGCAACCTGGATCCCCTTGC...CTCAGGATAACAGAGAATGGTGGTATTCAGTGGTCCAGGATTCTGTAATGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CAA 90 bp AGGTATGTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCGAGCCTCCTAAACAAGGACCTTGACTaGGACTGCACTGTTTCCCAG +
Preference number: 5 (lower is better)
Translates to: RYVHWQVMSPMLRWSSLLNKDLD*DCTVSQ
Trigger: CTGGGAAACAGTGCAGTCCAAGTCAAGGTCCTTGTT...TAGGAGGCTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTACATACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CAA 90 bp GTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCGAGCCTCCTAGCCTTGTACATATTCCTTCCCTaGCACAGTCTGAATCATCCC +
Preference number: 5 (lower is better)
Translates to: VHWQVMSPMLRWSSLLALYIFLP*HSLNHP
Trigger: GGGATGATTCAGACTGTGCAAGGGAAGGAATATGTA...CAAGGCTAGGAGGCTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CAA 90 bp CAGCCTACAAATCAAAGAACATCCCCAAATGGTTTACCCTTCTCCCGACCAAACACGAAACTCTTCAAGTaGGGTCACCCAGGGACCGAA +
Preference number: 5 (lower is better)
Translates to: QPTNQRTSPNGLPFSRPNTKLFK*GHPGTE
Trigger: TTCGGTCCCTGGGTGACCCAACTTGAAGAGTTTCGT...GTTTGGTCGGGAGAAGGGTAAACCATTTGGGGATGTTCTTTGATTTGTAGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461408.2
CDS-3UTR CAA 90 bp ATTCGCAGTGGAAAGAGTTCAGTGCATGTATCTCTTTTCAGAAAACATTTAACTCCGCTGACGCTGGGGTaGCTGAATGGGCTGTGGAGG +
Preference number: 5 (lower is better)
Translates to: IRSGKSSVHVSLFRKHLTPLTLG*LNGLWR
Trigger: CCTCCACAGCCCATTCAGCAACCCCAGCGTCAGCGG...AGTTAAATGTTTTCTGAAAAGAGATACATGCACTGAACTCTTTCCACTGCGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CAA 90 bp GTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCGAGCCTCCTAGCCTTGTGTGGTAAAAGTTTATaGAGAGCCAAGTTTGCCTGC +
Preference number: 5 (lower is better)
Translates to: VHWQVMSPMLRWSSLLALCGKSL*RAKFAC
Trigger: GCAGGCAAACTTGGCTCTCAATAAACTTTTACCACA...CAAGGCTAGGAGGCTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260408.8
ENST00000402627.5
CDS-3UTR CAA 90 bp GTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCGAGCCTCCTAGCCTTGCTCTTTGCATTTCTGTaGTTGAAGCAGGACCATATG +
Preference number: 5 (lower is better)
Translates to: VHWQVMSPMLRWSSLLALLFAFL*LKQDHM
Trigger: CATATGGTCCTGCTTCAACAACAGAAATGCAAAGAG...CAAGGCTAGGAGGCTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CAA 90 bp GTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCGAGCCTCCTAGCCTTGTTCTCCTATCAGGAGTaGTTACTTACATGCCCCAAA +
Preference number: 5 (lower is better)
Translates to: VHWQVMSPMLRWSSLLALFSYQE*LLTCPK
Trigger: TTTGGGGCATGTAAGTAACAACTCCTGATAGGAGAA...CAAGGCTAGGAGGCTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CAA 90 bp ACTCTGTTCCAGAATCATGTGGGGATCCAAAGTTATGTCCAACTTCGTGAGCAAAACAAGGACCTTGACTaGGACTGCACTGTTTCCCAG +
Preference number: 5 (lower is better)
Translates to: TLFQNHVGIQSYVQLREQNKDLD*DCTVSQ
Trigger: CTGGGAAACAGTGCAGTCCAAGTCAAGGTCCTTGTT...TTGCTCACGAAGTTGGACATAACTTTGGATCCCCACATGATTCTGGAACAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR CAA 90 bp AGGTATGTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCGAGCCTCCTACCAAACTGCATGACATaGCTTGACACTACAGGGAAT +
Preference number: 5 (lower is better)
Translates to: RYVHWQVMSPMLRWSSLLPNCMT*LDTTGN
Trigger: ATTCCCTGTAGTGTCAAGCAATGTCATGCAGTTTGG...TAGGAGGCTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTACATACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CAA 90 bp TTCTTATCATCTAGCCAAGGCCCTGGCACAATCAAGTGCCTAAGAAGTATCTGTGCTTGCACCCTGGTTTaGGGAAACCTTGACCCTTTA +
Preference number: 5 (lower is better)
Translates to: FLSSSQGPGTIKCLRSICACTLV*GNLDPL
Trigger: TAAAGGGTCAAGGTTTCCCAAAACCAGGGTGCAAGC...ACAGATACTTCTTAGGCACTTGATTGTGCCAGGGCCTTGGCTAGATGATAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CAA 90 bp ACTACAGGGACAAATACAAGGACTGAGGGTCGAGTAGTTTGCTCCGCTTGGACATCCCTTGTATATTATTaGTCCCTCTGTCCCCTGTAT +
Preference number: 5 (lower is better)
Translates to: TTGTNTRTEGRVVCSAWTSLVYY*SLCPLY
Trigger: ATACAGGGGACAGAGGGACAAATAATATACAAGGGA...TGTCCAAGCGGAGCAAACTACTCGACCCTCAGTCCTTGTATTTGTCCCTGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CAA 90 bp GTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCGAGCCTCCTAGCCTTGGTGAAATCAGCTTCATaGCCTATTTACAAAGCACAC +
Preference number: 5 (lower is better)
Translates to: VHWQVMSPMLRWSSLLALVKSAS*PIYKAH
Trigger: GTGTGCTTTGTAAATAGGCAATGAAGCTGATTTCAC...CAAGGCTAGGAGGCTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CAA 90 bp GTTTACCCTTCTCCCGACCAAACCCTTTCCCCTGGGCGACAGAATGTTTTCAAGGCTTTTAGGCACACCTaGAGGTTTTTAAGTTTACTC +
Preference number: 5 (lower is better)
Translates to: VYPSPDQTLSPGRQNVFKAFRHT*RFLSLL
Trigger: GAGTAAACTTAAAAACCTCAAGGTGTGCCTAAAAGC...CTTGAAAACATTCTGTCGCCCAGGGGAAAGGGTTTGGTCGGGAGAAGGGTAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000461408.2
CDS-3UTR CAA 90 bp TCTCCTGGTGTGCACTCTGTTCCAGAATCATGTGGGGATCCAAAGTTATGTCCACCCATTAATGCACACTaGTGTATGCCTATTACAGTC +
Preference number: 5 (lower is better)
Translates to: SPGVHSVPESCGDPKLCPPINAH*CMPITV
Trigger: GACTGTAATAGGCATACACAAGTGTGCATTAATGGG...TGGACATAACTTTGGATCCCCACATGATTCTGGAACAGAGTGCACACCAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR CAA 90 bp AATGCAGCAACGAAGAACAGGGAACACGGGGCACATAATAATATTCTAAGACTTGTGATGTCTCCAATGTaGAGGTGGTCGAGCCTCCTA +
Preference number: 5 (lower is better)
Translates to: NAATKNREHGAHNNILRLVMSPM*RWSSLL
Trigger: TAGGAGGCTCGACCACCTCAACATTGGAGACATCAC...AAGTCTTAGAATATTATTATGTGCCCCGTGTTCCCTGTTCTTCGTTGCTGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260408.8
ENST00000402627.5
CDS-3UTR CAA 90 bp ACTACAGGGACAAATACAAGGACTGAGGGTCGAGTAGTTTGCTCCGCTTGGACAATTTGGAATGGGACATaGTGCTGTTTCACCTTCAAT +
Preference number: 5 (lower is better)
Translates to: TTGTNTRTEGRVVCSAWTIWNGT*CCFTFN
Trigger: ATTGAAGGTGAAACAGCACAATGTCCCATTCCAAAT...TGTCCAAGCGGAGCAAACTACTCGACCCTCAGTCCTTGTATTTGTCCCTGTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CAA 90 bp AGGTATGTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCGAGCCTCCTAAGTAGTTTGCTCCGCTaGGACAAATCAGATTTCACT +
Preference number: 5 (lower is better)
Translates to: RYVHWQVMSPMLRWSSLLSSLLR*DKSDFT
Trigger: AGTGAAATCTGATTTGTCCAAGCGGAGCAAACTACT...TAGGAGGCTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTACATACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CAA 90 bp TTCTTATCATCTAGCCAAGGCCCTGGCACAATCAAGTGCCTAAGAAGTATCTGTTTCCCTCTGGTTGATTaGCATCGAAGCAGCATTCAT +
Preference number: 5 (lower is better)
Translates to: FLSSSQGPGTIKCLRSICFPLVD*HRSSIH
Trigger: ATGAATGCTGCTTCGATGCAAATCAACCAGAGGGAA...ACAGATACTTCTTAGGCACTTGATTGTGCCAGGGCCTTGGCTAGATGATAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CAA 90 bp TTCTTCCCTCTGGTTGATTTGCATCGAAGCAGCATTCATCTTTACACTGGTCACTTCCCAGGTTTCAGTTaGCATTTTCTTCCCTCTGGT +
Preference number: 5 (lower is better)
Translates to: FFPLVDLHRSSIHLYTGHFPGFS*HFLPSG
Trigger: ACCAGAGGGAAGAAAATGCAAACTGAAACCTGGGAA...GTGACCAGTGTAAAGATGAATGCTGCTTCGATGCAAATCAACCAGAGGGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR CAA 90 bp TTCTTATCATCTAGCCAAGGCCCTGGCACAATCAAGTGCCTAAGAAGTATCTGTTGTACAACAAGGACCTaGACTTGGACTGCACTGTTT +
Preference number: 5 (lower is better)
Translates to: FLSSSQGPGTIKCLRSICCTTRT*TWTALF
Trigger: AAACAGTGCAGTCCAAGTCAAGGTCCTTGTTGTACA...ACAGATACTTCTTAGGCACTTGATTGTGCCAGGGCCTTGGCTAGATGATAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CAA 90 bp TTGCCCATTAATGCACACTTGTGTATGCCTATTACAGTCTGTGAAGTTTGGTTTTCTCATGTGTCCCATTaGATAACTCTCTCGGGGCCG +
Preference number: 5 (lower is better)
Translates to: LPINAHLCMPITVCEVWFSHVSH*ITLSGP
Trigger: CGGCCCCGAGAGAGTTATCAAATGGGACACATGAGA...AAACCAAACTTCACAGACTGTAATAGGCATACACAAGTGTGCATTAATGGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR CAA 90 bp AGGTATGTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCGAGCCTCCTAAACAAGGTATGTACATaGGCAAGTGATGTCTCCAAT +
Preference number: 5 (lower is better)
Translates to: RYVHWQVMSPMLRWSSLLNKVCT*ASDVSN
Trigger: ATTGGAGACATCACTTGCCAATGTACATACCTTGTT...TAGGAGGCTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTACATACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260408.8
ENST00000402627.5
CDS-3UTR CAA 90 bp AAAGCATTACAGAATCCTGGACCACTGAATACCACCATTCTCTGTTATCCTGAGTTTGGCCTTGCTGGCTaGCGTCACATTATGAGAATG +
Preference number: 5 (lower is better)
Translates to: KALQNPGPLNTTILCYPEFGLAG*RHIMRM
Trigger: CATTCTCATAATGTGACGCAAGCCAGCAAGGCCAAA...CTCAGGATAACAGAGAATGGTGGTATTCAGTGGTCCAGGATTCTGTAATGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CAA 90 bp AAAGCATTACAGAATCCTGGACCACTGAATACCACCATTCTCTGTTATCCTGAGCTAGCATTTTTGGCCTaGCTGGCTTGCGTCACATTA +
Preference number: 5 (lower is better)
Translates to: KALQNPGPLNTTILCYPELAFLA*LACVTL
Trigger: TAATGTGACGCAAGCCAGCAAGGCCAAAAATGCTAG...CTCAGGATAACAGAGAATGGTGGTATTCAGTGGTCCAGGATTCTGTAATGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CAA 90 bp TTCTTATCATCTAGCCAAGGCCCTGGCACAATCAAGTGCCTAAGAAGTATCTGTTTCACAACTCCCAGATaGTTGGGCCAATATCCTAAG +
Preference number: 5 (lower is better)
Translates to: FLSSSQGPGTIKCLRSICFTTPR*LGQYPK
Trigger: CTTAGGATATTGGCCCAACAATCTGGGAGTTGTGAA...ACAGATACTTCTTAGGCACTTGATTGTGCCAGGGCCTTGGCTAGATGATAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CAA 90 bp TATAACAAGGTATGTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCGAGCTCTTCATTCGTAGGTaGAAATGTCTTCCATGGGCA +
Preference number: 5 (lower is better)
Translates to: YNKVCTLASDVSNVEVVELFIRR*KCLPWA
Trigger: TGCCCATGGAAGACATTTCAACCTACGAATGAAGAG...CTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTACATACCTTGTTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CAA 90 bp ATGTGGGGATCCAAAGTTATGTCCAACTTCGTGAGCAAAAGTAATGTGAGAGACTTCCCTCTGGTTGATTaGCATCGAAGCAGCATTCAT +
Preference number: 5 (lower is better)
Translates to: MWGSKVMSNFVSKSNVRDFPLVD*HRSSIH
Trigger: ATGAATGCTGCTTCGATGCAAATCAACCAGAGGGAA...GTCTCTCACATTACTTTTGCTCACGAAGTTGGACATAACTTTGGATCCCCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR CAA 90 bp AGGTATGTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCGAGCCTCCTATCCTTTAACCCATCGTaGTCTTTTCTCTTTGCATTT +
Preference number: 5 (lower is better)
Translates to: RYVHWQVMSPMLRWSSLLSFNPS*SFLFAF
Trigger: AAATGCAAAGAGAAAAGACAACGATGGGTTAAAGGA...TAGGAGGCTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTACATACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CAA 90 bp AGGTATGTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCGAGCCTCCTAATAAAAACCGGCCTGTaGTATTTAGAAACACAAAGG +
Preference number: 5 (lower is better)
Translates to: RYVHWQVMSPMLRWSSLLIKTGL*YLETQR
Trigger: CCTTTGTGTTTCTAAATACAACAGGCCGGTTTTTAT...TAGGAGGCTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTACATACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CAA 90 bp TTCTTATCATCTAGCCAAGGCCCTGGCACAATCAAGTGCCTAAGAAGTATCTGTATGCCTTTCCCATTTTaGCAAAACATGGTCGGTATG +
Preference number: 5 (lower is better)
Translates to: FLSSSQGPGTIKCLRSICMPFPF*QNMVGM
Trigger: CATACCGACCATGTTTTGCAAAAATGGGAAAGGCAT...ACAGATACTTCTTAGGCACTTGATTGTGCCAGGGCCTTGGCTAGATGATAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CAA 90 bp ACATTGCCCATTAATGCACACTTGTGTATGCCTATTACAGTCTGTGAAGTTTGGTGTACAACAAGGACCTaGACTTGGACTGCACTGTTT +
Preference number: 5 (lower is better)
Translates to: TLPINAHLCMPITVCEVWCTTRT*TWTALF
Trigger: AAACAGTGCAGTCCAAGTCAAGGTCCTTGTTGTACA...CCAAACTTCACAGACTGTAATAGGCATACACAAGTGTGCATTAATGGGCAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR CAA 90 bp TTCTCCACACCAATATTTGGGAAACGGAAAGGATTTGTAGGGTCCTTCTCATCATTCTCAGACTTTGACTaGAATGCACACTGTGCTGTA +
Preference number: 5 (lower is better)
Translates to: FSTPIFGKRKGFVGSFSSFSDFD*NAHCAV
Trigger: TACAGCACAGTGTGCATTCAAGTCAAAGTCTGAGAA...TGATGAGAAGGACCCTACAAATCCTTTCCGTTTCCCAAATATTGGTGTGGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR CAA 90 bp AAAGCATTACAGAATCCTGGACCACTGAATACCACCATTCTCTGTTATCCTGAGCCCATTAATGCACACTaGTGTATGCCTATTACAGTC +
Preference number: 5 (lower is better)
Translates to: KALQNPGPLNTTILCYPEPINAH*CMPITV
Trigger: GACTGTAATAGGCATACACAAGTGTGCATTAATGGG...CTCAGGATAACAGAGAATGGTGGTATTCAGTGGTCCAGGATTCTGTAATGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CAA 90 bp AATGCAGCAACGAAGAACAGGGAACACGGGGCACATAATAATATTCTAAGACTTGATAGAACCTGCACATaGCCCATTAATGCACACTTG +
Preference number: 5 (lower is better)
Translates to: NAATKNREHGAHNNILRLDRTCT*PINAHL
Trigger: CAAGTGTGCATTAATGGGCAATGTGCAGGTTCTATC...AAGTCTTAGAATATTATTATGTGCCCCGTGTTCCCTGTTCTTCGTTGCTGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260408.8
ENST00000396136.6
CDS-3UTR CAA 90 bp ATTCGCAGTGGAAAGAGTTCAGTGCATGTATCTCTTTTCAGAAAACATTTAACTTCTCATGTGTCCCATTaGATAACTCTCTCGGGGCCG +
Preference number: 5 (lower is better)
Translates to: IRSGKSSVHVSLFRKHLTSHVSH*ITLSGP
Trigger: CGGCCCCGAGAGAGTTATCAAATGGGACACATGAGA...AGTTAAATGTTTTCTGAAAAGAGATACATGCACTGAACTCTTTCCACTGCGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CAA 90 bp AATGCAGCAACGAAGAACAGGGAACACGGGGCACATAATAATATTCTAAGACTTCCTCCCACCCCCAAATaGGAATTTTCAGGCTTTAAA +
Preference number: 5 (lower is better)
Translates to: NAATKNREHGAHNNILRLPPTPK*EFSGFK
Trigger: TTTAAAGCCTGAAAATTCCAATTTGGGGGTGGGAGG...AAGTCTTAGAATATTATTATGTGCCCCGTGTTCCCTGTTCTTCGTTGCTGCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000260408.8
ENST00000396136.6
ENST00000402627.5
ENST00000561288.1
CDS-3UTR CAA 90 bp AATGCAGCAACGAAGAACAGGGAACACGGGGCACATAATAATATTCTAAGACTTACCCACTTCCAACCTTaGCACAGTCCAAAAACAAAG +
Preference number: 5 (lower is better)
Translates to: NAATKNREHGAHNNILRLTHFQP*HSPKTK
Trigger: CTTTGTTTTTGGACTGTGCAAAGGTTGGAAGTGGGT...AAGTCTTAGAATATTATTATGTGCCCCGTGTTCCCTGTTCTTCGTTGCTGCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CAA 90 bp ATTCGCAGTGGAAAGAGTTCAGTGCATGTATCTCTTTTCAGAAAACATTTAACTTGTGAGACTGCTCTTTaGGCACGCTGGTGTTTTTGG +
Preference number: 5 (lower is better)
Translates to: IRSGKSSVHVSLFRKHLTCETAL*ARWCFW
Trigger: CCAAAAACACCAGCGTGCCAAAAGAGCAGTCTCACA...AGTTAAATGTTTTCTGAAAAGAGATACATGCACTGAACTCTTTCCACTGCGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CAA 90 bp GAAAGGATTTGTAGGGTCCTTCTCATCAGCAGTTGTATTGATTCTTATGCGTTTTACATATTCCTTCCCTaGCACAGTCTGAATCATCCC +
Preference number: 5 (lower is better)
Translates to: ERICRVLLISSCIDSYAFYIFLP*HSLNHP
Trigger: GGGATGATTCAGACTGTGCAAGGGAAGGAATATGTA...AAACGCATAAGAATCAATACAACTGCTGATGAGAAGGACCCTACAAATCCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR CAA 90 bp AATGCAGCAACGAAGAACAGGGAACACGGGGCACATAATAATATTCTAAGACTTTGTGGTAAAAGTTTATaGAGAGCCAAGTTTGCCTGC +
Preference number: 5 (lower is better)
Translates to: NAATKNREHGAHNNILRLCGKSL*RAKFAC
Trigger: GCAGGCAAACTTGGCTCTCAATAAACTTTTACCACA...AAGTCTTAGAATATTATTATGTGCCCCGTGTTCCCTGTTCTTCGTTGCTGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260408.8
ENST00000402627.5
ENST00000561288.1
CDS-3UTR CAA 90 bp AAGGTAACTGGTCAATGCATATCAGCAAATGCATACCATAAAAGCCAAAGAATTATGCTGAAACTGAAGTaGTCCTCTGTGGGGCAAACC +
Preference number: 5 (lower is better)
Translates to: KVTGQCISANAYHKSQRIMLKLK*SSVGQT
Trigger: GGTTTGCCCCACAGAGGACAACTTCAGTTTCAGCAT...AATTCTTTGGCTTTTATGGTATGCATTTGCTGATATGCATTGACCAGTTACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CAA 90 bp TTCTTATCATCTAGCCAAGGCCCTGGCACAATCAAGTGCCTAAGAAGTATCTGTTTACCTAGCATCCTGTaGCTTTTTATAGAAGAGATG +
Preference number: 5 (lower is better)
Translates to: FLSSSQGPGTIKCLRSICLPSIL*LFIEEM
Trigger: CATCTCTTCTATAAAAAGCAACAGGATGCTAGGTAA...ACAGATACTTCTTAGGCACTTGATTGTGCCAGGGCCTTGGCTAGATGATAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CAA 90 bp AAAGCATTACAGAATCCTGGACCACTGAATACCACCATTCTCTGTTATCCTGAGTTTGCATTTCTGTTGTaGAAGCAGGACCATATGTCT +
Preference number: 5 (lower is better)
Translates to: KALQNPGPLNTTILCYPEFAFLL*KQDHMS
Trigger: AGACATATGGTCCTGCTTCAACAACAGAAATGCAAA...CTCAGGATAACAGAGAATGGTGGTATTCAGTGGTCCAGGATTCTGTAATGCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CAA 90 bp TATAACAAGGTATGTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCGAGAACTCACAGCCAATCTaGTTTCAACTATATCCACAC +
Preference number: 5 (lower is better)
Translates to: YNKVCTLASDVSNVEVVENSQPI*FQLYPH
Trigger: GTGTGGATATAGTTGAAACAAGATTGGCTGTGAGTT...CTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTACATACCTTGTTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CAA 90 bp ACACTGCATATCTTAATAAATCCAGCCATTAGCATGATCAGAGCAATTCCCATAGATAGAACCTGCACATaGCCCATTAATGCACACTTG +
Preference number: 5 (lower is better)
Translates to: TLHILINPAISMIRAIPIDRTCT*PINAHL
Trigger: CAAGTGTGCATTAATGGGCAATGTGCAGGTTCTATC...TATGGGAATTGCTCTGATCATGCTAATGGCTGGATTTATTAAGATATGCAGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR CAA 90 bp ATTCGCAGTGGAAAGAGTTCAGTGCATGTATCTCTTTTCAGAAAACATTTAACTTTTTCTCTAGCATTTTaGGCCTTGCTGGCTTGCGTC +
Preference number: 5 (lower is better)
Translates to: IRSGKSSVHVSLFRKHLTFSLAF*ALLACV
Trigger: GACGCAAGCCAGCAAGGCCAAAAATGCTAGAGAAAA...AGTTAAATGTTTTCTGAAAAGAGATACATGCACTGAACTCTTTCCACTGCGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CAA 90 bp TATAACAAGGTATGTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGTCGAGTTATATTACCACATCTaGATTCGCAGTGGAAAGAGT +
Preference number: 5 (lower is better)
Translates to: YNKVCTLASDVSNVEVVELYYHI*IRSGKS
Trigger: ACTCTTTCCACTGCGAATCAAGATGTGGTAATATAA...CTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTACATACCTTGTTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CAA 90 bp CTGCATATAACAAGGTATGTACATTGGCAAGTGATGTCTCCAATGTTGAGGTGGATGAGTTTCAATCTCTaGCAGATATTATCCTTGCTG +
Preference number: 5 (lower is better)
Translates to: LHITRYVHWQVMSPMLRWMSFNL*QILSLL
Trigger: CAGCAAGGATAATATCTGCAAGAGATTGAAACTCAT...CCACCTCAACATTGGAGACATCACTTGCCAATGTACATACCTTGTTATATGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CAA 90 bp ATTCGCAGTGGAAAGAGTTCAGTGCATGTATCTCTTTTCAGAAAACATTTAACTCTGCATGATCAGCTCTaGGATCACCAAAAACCTCCT +
Preference number: 5 (lower is better)
Translates to: IRSGKSSVHVSLFRKHLTLHDQL*DHQKPP
Trigger: AGGAGGTTTTTGGTGATCCAAGAGCTGATCATGCAG...AGTTAAATGTTTTCTGAAAAGAGATACATGCACTGAACTCTTTCCACTGCGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CAA 90 bp TATGTCACAAGCTTCAATTTTTGTAATGCCCCTTCTATTTCCTGCATAGCAATAACAACTCCCAGATTGTaGGGCCAATATCCTAAGGAG +
Preference number: 5 (lower is better)
Translates to: YVTSFNFCNAPSISCIAITTPRL*GQYPKE
Trigger: CTCCTTAGGATATTGGCCCAACAATCTGGGAGTTGT...TATTGCTATGCAGGAAATAGAAGGGGCATTACAAAAATTGAAGCTTGTGACATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CAA 90 bp AATGCAGCAACGAAGAACAGGGAACACGGGGCACATAATAATATTCTAAGACTTATTTCCACAAATAGGTaGGCCAGATTCAACAAAACA +
Preference number: 5 (lower is better)
Translates to: NAATKNREHGAHNNILRLISTNR*ARFNKT
Trigger: TGTTTTGTTGAATCTGGCCAACCTATTTGTGGAAAT...AAGTCTTAGAATATTATTATGTGCCCCGTGTTCCCTGTTCTTCGTTGCTGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260408.8
ENST00000396136.6
CDS-3UTR CAA 90 bp AAGGTAACTGGTCAATGCATATCAGCAAATGCATACCATAAAAGCCAAAGAATTTTCCCAGGTTTCAGTTaGCATTTTCTTCCCTCTGGT +
Preference number: 5 (lower is better)
Translates to: KVTGQCISANAYHKSQRIFPGFS*HFLPSG
Trigger: ACCAGAGGGAAGAAAATGCAAACTGAAACCTGGGAA...AATTCTTTGGCTTTTATGGTATGCATTTGCTGATATGCATTGACCAGTTACCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CAA 90 bp TATGTCACAAGCTTCAATTTTTGTAATGCCCCTTCTATTTCCTGCATAGCAATAAAAACTACATCTGGCTaGCACCCTGGTTTTGGGAAA +
Preference number: 5 (lower is better)
Translates to: YVTSFNFCNAPSISCIAIKTTSG*HPGFGK
Trigger: TTTCCCAAAACCAGGGTGCAAGCCAGATGTAGTTTT...TATTGCTATGCAGGAAATAGAAGGGGCATTACAAAAATTGAAGCTTGTGACATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS GCA 90 bp TACTTTTCTTCATACAGCATACATGGCATAATTCTTTATCATCTTTaGCATCAGAACTGGCACACGTACACTCCTCTAAGCCATATTTCT +
Preference number: 5 (lower is better)
Translates to: YFSSYSIHGIILYHL*HQNWHTYTPLSHIS
Trigger: AGAAATATGGCTTAGAGGAGTGTACGTGTGCCAGTTCTGATGGCAAAGATGATAAAGAATTATGCCATGTATGCTGTATGAAGAAAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462061.1
ENST00000482945.5
CDS-3UTR CAA 90 bp TATGTCACAAGCTTCAATTTTTGTAATGCCCCTTCTATTTCCTGCATAGCAATATCTCCACACCAATATTaGGGAAACGGAAAGGATTTG +
Preference number: 5 (lower is better)
Translates to: YVTSFNFCNAPSISCIAISPHQY*GNGKDL
Trigger: CAAATCCTTTCCGTTTCCCAAATATTGGTGTGGAGA...TATTGCTATGCAGGAAATAGAAGGGGCATTACAAAAATTGAAGCTTGTGACATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CAA 90 bp ATTCGCAGTGGAAAGAGTTCAGTGCATGTATCTCTTTTCAGAAAACATTTAACTTTCTCAGACTTTGACTaGAATGCACACTGTGCTGTA +
Preference number: 5 (lower is better)
Translates to: IRSGKSSVHVSLFRKHLTFSDFD*NAHCAV
Trigger: TACAGCACAGTGTGCATTCAAGTCAAAGTCTGAGAA...AGTTAAATGTTTTCTGAAAAGAGATACATGCACTGAACTCTTTCCACTGCGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CAA 90 bp GAAAGGATTTGTAGGGTCCTTCTCATCAGCAGTTGTATTGATTCTTATGCGTTTACTTTGGATTACTACTaGGAGTATGAACACTGCATA +
Preference number: 5 (lower is better)
Translates to: ERICRVLLISSCIDSYAFTLDYY*EYEHCI
Trigger: TATGCAGTGTTCATACTCCAAGTAGTAATCCAAAGT...AAACGCATAAGAATCAATACAACTGCTGATGAGAAGGACCCTACAAATCCTTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396136.6
CDS-3UTR CAA 90 bp TATGTCACAAGCTTCAATTTTTGTAATGCCCCTTCTATTTCCTGCATAGCAATATGTGGTAAAAGTTTATaGAGAGCCAAGTTTGCCTGC +
Preference number: 5 (lower is better)
Translates to: YVTSFNFCNAPSISCIAICGKSL*RAKFAC
Trigger: GCAGGCAAACTTGGCTCTCAATAAACTTTTACCACA...TATTGCTATGCAGGAAATAGAAGGGGCATTACAAAAATTGAAGCTTGTGACATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CAA 90 bp ATTCGCAGTGGAAAGAGTTCAGTGCATGTATCTCTTTTCAGAAAACATTTAACTAAAAATTGCAGCAGGTaGATAAGTGAATGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: IRSGKSSVHVSLFRKHLTKNCSR*ISEWEL
Trigger: CAGCTCCCATTCACTTATCAACCTGCTGCAATTTTT...AGTTAAATGTTTTCTGAAAAGAGATACATGCACTGAACTCTTTCCACTGCGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS TCA 90 bp AGCACGGTAAAACAGAATGACTCCCATCACCTACTAAGCAATCTATaGATGATACACATGATTCTGATCACTTCAGAAGGAAATAATAAC +
Preference number: 5 (lower is better)
Translates to: STVKQNDSHHLLSNL*MIHMILITSEGNNN
Trigger: GTTATTATTTCCTTCTGAAGTGATCAGAATCATGTGTATCATTCATAGATTGCTTAGTAGGTGATGGGAGTCATTCTGTTTTACCGTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470269.5
CDS TCA 90 bp TTTGGTGTAATGAATCCACATTGTAAGATAATCCTTCATAATGTCTaGTATATTTATTTAAAGGATTCCCATACTGACCTCCCATCCCCG +
Preference number: 5 (lower is better)
Translates to: FGVMNPHCKIILHNV*YIYLKDSHTDLPSP
Trigger: CGGGGATGGGAGGTCAGTATGGGAATCCTTTAAATAAATATATCAGACATTATGAAGGATTATCTTACAATGTGGATTCATTACACCAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260408.8
ENST00000439637.5
ENST00000558004.1
ENST00000558733.5
ENST00000560608.5
ENST00000561149.1
CDS-3UTR CAA 90 bp AAGGTAACTGGTCAATGCATATCAGCAAATGCATACCATAAAAGCCAAAGAATTTTATTGTTGTTAAGTTaGTCCCCAGATGTTGCTCTT +
Preference number: 5 (lower is better)
Translates to: KVTGQCISANAYHKSQRILLLLS*SPDVAL
Trigger: AAGAGCAACATCTGGGGACAAACTTAACAACAATAA...AATTCTTTGGCTTTTATGGTATGCATTTGCTGATATGCATTGACCAGTTACCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CAA 90 bp ATTCGCAGTGGAAAGAGTTCAGTGCATGTATCTCTTTTCAGAAAACATTTAACTATTTCCACAAATAGGTaGGCCAGATTCAACAAAACA +
Preference number: 5 (lower is better)
Translates to: IRSGKSSVHVSLFRKHLTISTNR*ARFNKT
Trigger: TGTTTTGTTGAATCTGGCCAACCTATTTGTGGAAAT...AGTTAAATGTTTTCTGAAAAGAGATACATGCACTGAACTCTTTCCACTGCGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS-3UTR CAA 90 bp TATGTCACAAGCTTCAATTTTTGTAATGCCCCTTCTATTTCCTGCATAGCAATAACTTTGGATTACTACTaGGAGTATGAACACTGCATA +
Preference number: 5 (lower is better)
Translates to: YVTSFNFCNAPSISCIAITLDYY*EYEHCI
Trigger: TATGCAGTGTTCATACTCCAAGTAGTAATCCAAAGT...TATTGCTATGCAGGAAATAGAAGGGGCATTACAAAAATTGAAGCTTGTGACATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260408.8
CDS CCA 72 bp TGGTCCGGAGCCTCCACGGGAAGCCGGGACCTCCCCTaGCAGGAGAAACGGCGAAGCACCTCCCTCTCGCTC +
Preference number: 6 (lower is better)
Translates to: WSGASTGSRDLP*QEKRRSTSLSL
Trigger: GAGCGAGAGGGAGGTGCTTCGCCGTTTCTCCTGCCAGGGGAGGTCCCGGCTTCCCGTGGAGGCTCCGGACCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260408.8
ENST00000439637.5
ENST00000461408.2
ENST00000558004.1
ENST00000558733.5
ENST00000560608.5
ENST00000561149.1
ENST00000561288.1
CDS CCA 72 bp CAGCACATCGATCCGGAGGGAGAAGCTGAAGGGGCTTaGTCCGGAGCCTCCACGGGAAGCCGGGACCTCCCC +
Preference number: 6 (lower is better)
Translates to: QHIDPEGEAEGA*SGASTGSRDLP
Trigger: GGGGAGGTCCCGGCTTCCCGTGGAGGCTCCGGACCAAGCCCCTTCAGCTTCTCCCTCCGGATCGATGTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260408.8
ENST00000439637.5
ENST00000461408.2
ENST00000558004.1
ENST00000558733.5
ENST00000560608.5
ENST00000561149.1
ENST00000561288.1
CDS TCA 72 bp GGGTTAACAGCAGCACATCGATCCGGAGGGAGAAGCTaGAGGGGCTTGGTCCGGAGCCTCCACGGGAAGCCG +
Preference number: 6 (lower is better)
Translates to: GLTAAHRSGGRS*RGLVRSLHGKP
Trigger: CGGCTTCCCGTGGAGGCTCCGGACCAAGCCCCTTCAGCTTCTCCCTCCGGATCGATGTGCTGCTGTTAACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260408.8
ENST00000439637.5
ENST00000461408.2
ENST00000558004.1
ENST00000558733.5
ENST00000560608.5
ENST00000561149.1
ENST00000561288.1
CDS CCA 72 bp GCAGGCTTTACAGGAAGCATGGTGCTGGCATCCGCTTaGCTTCTAGAGAGGTCTCAGGAAGCTTATAAGCAT +
Preference number: 6 (lower is better)
Translates to: AGFTGSMVLASA*LLERSQEAYKH
Trigger: ATGCTTATAAGCTTCCTGAGACCTCTCTAGAAGCCAAGCGGATGCCAGCACCATGCTTCCTGTAAAGCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558733.5
CDS CCA 72 bp TCCAGCTTGGTCAGCAGAGCGAGACTCCATCTTCCATaGGCATGGAAATCTAGACGTAAAAATTGGTCTTCA +
Preference number: 6 (lower is better)
Translates to: SSLVSRARLHLP*AWKSRRKNWSS
Trigger: TGAAGACCAATTTTTACGTCTAGATTTCCATGCCCATGGAAGATGGAGTCTCGCTCTGCTGACCAAGCTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561149.1
CDS CCA 72 bp CACCTTCCATGGGCATGGAAATCTAGACGTAAAAATTaGTCTTCATGTGAGACTGCTCTTTTGGCACGCTGG +
Preference number: 6 (lower is better)
Translates to: HLPWAWKSRRKN*SSCETALLARW
Trigger: CCAGCGTGCCAAAAGAGCAGTCTCACATGAAGACCAATTTTTACGTCTAGATTTCCATGCCCATGGAAGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560608.5
CDS CCA 72 bp TGTCTTCCATGGGCATGGAAATCTAGACGTAAAAATTaGTCTTCATGTGAGACTGCTCTTTTGGCACGCTGG +
Preference number: 6 (lower is better)
Translates to: CLPWAWKSRRKN*SSCETALLARW
Trigger: CCAGCGTGCCAAAAGAGCAGTCTCACATGAAGACCAATTTTTACGTCTAGATTTCCATGCCCATGGAAGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260408.8
ENST00000439637.5
ENST00000497846.5
ENST00000558733.5
CDS CCA 72 bp TCTCTTCCATGGGCATGGAAATCTAGACGTAAAAATTaGTCTTCATGTGAGACTGCTCTTTTGGCACGCTGG +
Preference number: 6 (lower is better)
Translates to: SLPWAWKSRRKN*SSCETALLARW
Trigger: CCAGCGTGCCAAAAGAGCAGTCTCACATGAAGACCAATTTTTACGTCTAGATTTCCATGCCCATGGAAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558004.1
CDS CCA 72 bp TTGGTCAGCAGAGCGAGACTCCATCTTCCATGGGCATaGAAATCTAGACGTAAAAATTGGTCTTCATGTGAG +
Preference number: 6 (lower is better)
Translates to: LVSRARLHLPWA*KSRRKNWSSCE
Trigger: CTCACATGAAGACCAATTTTTACGTCTAGATTTCCATGCCCATGGAAGATGGAGTCTCGCTCTGCTGACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561149.1
CDS GCA 72 bp TTTATCAAGAAAAGAGTTTTAATTGGCTCATCGTTCTaGAGGCTTTACAGGAAGCATGGTGCTGGCATCCGC +
Preference number: 6 (lower is better)
Translates to: FIKKRVLIGSSF*RLYRKHGAGIR
Trigger: GCGGATGCCAGCACCATGCTTCCTGTAAAGCCTGCAGAACGATGAGCCAATTAAAACTCTTTTCTTGATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558733.5
CDS CCA 72 bp ATGAATCCTTCAAATCTTCCATCAATAACAGACCCATaGCTAAAACTTCCTTCTTCACCTTCCATGGGCATG +
Preference number: 6 (lower is better)
Translates to: MNPSNLPSITDP*LKLPSSPSMGM
Trigger: CATGCCCATGGAAGGTGAAGAAGGAAGTTTTAGCCATGGGTCTGTTATTGATGGAAGATTTGAAGGATTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560608.5
CDS CAA 72 bp AGACGTAAAAATTGGTCTTCATGTGAGACTGCTCTTTaGGCACGCTGGTGTTTTTGGTGTAATGAATCCACA +
Preference number: 6 (lower is better)
Translates to: RRKNWSSCETAL*ARWCFWCNEST
Trigger: TGTGGATTCATTACACCAAAAACACCAGCGTGCCAAAAGAGCAGTCTCACATGAAGACCAATTTTTACGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000260408.8
ENST00000439637.5
ENST00000497846.5
ENST00000558004.1
ENST00000558733.5
ENST00000560608.5
ENST00000561149.1
CDS CCA 72 bp GCCATTTTCTTTTTGACCCAAATTCTTAGATTCTCCTaGTGTGCACTCTGTTCCAGAATCATGCTTCTATTT +
Preference number: 6 (lower is better)
Translates to: AIFFLTQILRFS*CALCSRIMLLF
Trigger: AAATAGAAGCATGATTCTGGAACAGAGTGCACACCAGGAGAATCTAAGAATTTGGGTCAAAAAGAAAATGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475898.1
CDS CAA 90 bp TTACTTTTCTTCATACAGCATACATGGCATAATTCTTTATCATCTTaGCCATCAGAACTGGCACACGTACACTCCTCTAAGCCATATTTC +
Preference number: 6 (lower is better)
Translates to: LLFFIQHTWHNSLSS*PSELAHVHSSKPYF
Trigger: GAAATATGGCTTAGAGGAGTGTACGTGTGCCAGTTCTGATGGCAAAGATGATAAAGAATTATGCCATGTATGCTGTATGAAGAAAAGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462061.1
ENST00000482945.5
CDS TCA 72 bp AAACAGAATGACTCCCATCACCTACTAAGCAATCTATaGATGATACACATGATTCTGATCACTTCAGAAGGA +
Preference number: 6 (lower is better)
Translates to: KQNDSHHLLSNL*MIHMILITSEG
Trigger: TCCTTCTGAAGTGATCAGAATCATGTGTATCATTCATAGATTGCTTAGTAGGTGATGGGAGTCATTCTGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470269.5
CDS CAA 90 bp AACACACACATACATACATACACACACACACACATACACACTAATTaGAGAAAGGGGAATGTGAGTTATAAGTCAATTTCCAAAGCAAAC +
Preference number: 6 (lower is better)
Translates to: NTHIHTYTHTHIHTN*RKGNVSYKSISKAN
Trigger: GTTTGCTTTGGAAATTGACTTATAACTCACATTCCCCTTTCTCAAATTAGTGTGTATGTGTGTGTGTGTGTATGTATGTATGTGTGTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470269.5
CDS CAA 72 bp TTAAGAAAACATCAGGTAATTCTGTGTTTGTACAACTaGGAGATATGTGGGCTTAAAAATAAGCGTTCAGTG +
Preference number: 6 (lower is better)
Translates to: LRKHQVILCLYN*EICGLKNKRSV
Trigger: CACTGAACGCTTATTTTTAAGCCCACATATCTCCAAGTTGTACAAACACAGAATTACCTGATGTTTTCTTAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470269.5