RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADA (Homo sapiens)

Ensembl gene IDs: ENSG00000196839

Ensembl transcript IDs: ENST00000372874.9, ENST00000464097.5, ENST00000492931.5, ENST00000535573.1, ENST00000536076.1, ENST00000536532.5, ENST00000537820.1, ENST00000539235.5, ENST00000545776.5

Found 271 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCCACAGAGTTGGGGTGACTCCACAGGGTGAAGGCTTGGAGGAGTaGCGTCTTCAGAGGTTCTGCCCTGCAGAGGCTGAAGGTGGCATC +
Preference number: 1 (lower is better)
Translates to: PHRVGVTPQGEGLEE*RLQRFCPAEAEGGI
Trigger: GATGCCACCTTCAGCCTCTGCAGGGCAGAACCTCTGAAGACGCCACTCCTCCAAGCCTTCACCCTGTGGAGTCACCCCAACTCTGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536532.5
3UTR CCA 90 bp AGGGTTTCAGATTCAACCATGCCCATGTGCAAGGGCGCTGGTCCCTaGCCAGGGCACATAATCAGAGAAGTGACGCGGCCATGCCGAGGT +
Preference number: 1 (lower is better)
Translates to: RVSDSTMPMCKGAGP*PGHIIREVTRPCRG
Trigger: ACCTCGGCATGGCCGCGTCACTTCTCTGATTATGTGCCCTGGCCAGGGACCAGCGCCCTTGCACATGGGCATGGTTGAATCTGAAACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
3UTR CCA 90 bp CAGAAGGAGGGTTTCAGATTCAACCATGCCCATGTGCAAGGGCGCTaGTCCCTGGCCAGGGCACATAATCAGAGAAGTGACGCGGCCATG +
Preference number: 1 (lower is better)
Translates to: QKEGFRFNHAHVQGR*SLARAHNQRSDAAM
Trigger: CATGGCCGCGTCACTTCTCTGATTATGTGCCCTGGCCAGGGACCAGCGCCCTTGCACATGGGCATGGTTGAATCTGAAACCCTCCTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
3UTR GCA 90 bp GCTGGTCCCTGGCCAGGGCACATAATCAGAGAAGTGACGCGGCCATaGCGAGGTATACGTGTGTGCAGAAATGGACACATAGGGTTCAGG +
Preference number: 1 (lower is better)
Translates to: AGPWPGHIIREVTRP*RGIRVCRNGHIGFR
Trigger: CCTGAACCCTATGTGTCCATTTCTGCACACACGTATACCTCGGCATGGCCGCGTCACTTCTCTGATTATGTGCCCTGGCCAGGGACCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
3UTR GCA 90 bp ACAAGTTGCCACAGAAGGAGGGTTTCAGATTCAACCATGCCCATGTaGAAGGGCGCTGGTCCCTGGCCAGGGCACATAATCAGAGAAGTG +
Preference number: 1 (lower is better)
Translates to: TSCHRRRVSDSTMPM*KGAGPWPGHIIREV
Trigger: CACTTCTCTGATTATGTGCCCTGGCCAGGGACCAGCGCCCTTGCACATGGGCATGGTTGAATCTGAAACCCTCCTTCTGTGGCAACTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372874.9
3UTR GCA 90 bp CCAGCCATGGGCTTCTTTATTGAGCACCAGATTTTCAGTACAAGTTaGCACAGAAGGAGGGTTTCAGATTCAACCATGCCCATGTGCAAG +
Preference number: 1 (lower is better)
Translates to: PAMGFFIEHQIFSTS*HRRRVSDSTMPMCK
Trigger: CTTGCACATGGGCATGGTTGAATCTGAAACCCTCCTTCTGTGGCAACTTGTACTGAAAATCTGGTGCTCAATAAAGAAGCCCATGGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372874.9
3UTR CCA 90 bp ATAGGCTTTATAGAGCAGGTCGAGAAGCTCCCTCTTTTCATCTTCTaGGAGGAAACTAGATTTGGCCGCATTGATGTTCAGCCTTTTAAA +
Preference number: 1 (lower is better)
Translates to: IGFIEQVEKLPLFIF*EETRFGRIDVQPFK
Trigger: TTTAAAAGGCTGAACATCAATGCGGCCAAATCTAGTTTCCTCCCAGAAGATGAAAAGAGGGAGCTTCTCGACCTGCTCTATAAAGCCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536532.5
ENST00000539235.5
3UTR-3UTR GCA 90 bp GGGTTTCAGATTCAACCATGCCCATGTGCAAGGGCGCTGGTCCCTGGCCAGGGCGAAGTGACGCGGCCATaGCGAGGTATACGTGTGTGC +
Preference number: 2 (lower is better)
Translates to: GFQIQPCPCARALVPGQGEVTRP*RGIRVC
Trigger: GCACACACGTATACCTCGGCATGGCCGCGTCACTTC...GCCCTGGCCAGGGACCAGCGCCCTTGCACATGGGCATGGTTGAATCTGAAACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
3UTR-3UTR GCA 90 bp AACCATGCCCATGTGCAAGGGCGCTGGTCCCTGGCCAGGGCACATAATCAGAGATCAACCATGCCCATGTaGAAGGGCGCTGGTCCCTGG +
Preference number: 2 (lower is better)
Translates to: NHAHVQGRWSLARAHNQRSTMPM*KGAGPW
Trigger: CCAGGGACCAGCGCCCTTGCACATGGGCATGGTTGA...TCTCTGATTATGTGCCCTGGCCAGGGACCAGCGCCCTTGCACATGGGCATGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
3UTR-3UTR CCA 90 bp AGATTCAACCATGCCCATGTGCAAGGGCGCTGGTCCCTGGCCAGGGCACATAATAAGGGCGCTGGTCCCTaGCCAGGGCACATAATCAGA +
Preference number: 2 (lower is better)
Translates to: RFNHAHVQGRWSLARAHNKGAGP*PGHIIR
Trigger: TCTGATTATGTGCCCTGGCCAGGGACCAGCGCCCTT...ATTATGTGCCCTGGCCAGGGACCAGCGCCCTTGCACATGGGCATGGTTGAATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
3UTR-3UTR CCA 90 bp AACCATGCCCATGTGCAAGGGCGCTGGTCCCTGGCCAGGGCACATAATCAGAGACACAGGGTGAAGGCTTaGAGGAGTGGCGTCTTCAGA +
Preference number: 2 (lower is better)
Translates to: NHAHVQGRWSLARAHNQRHRVKA*RSGVFR
Trigger: TCTGAAGACGCCACTCCTCCAAGCCTTCACCCTGTG...TCTCTGATTATGTGCCCTGGCCAGGGACCAGCGCCCTTGCACATGGGCATGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536532.5
3UTR-3UTR GCA 90 bp TTGCCACAGAAGGAGGGTTTCAGATTCAACCATGCCCATGTGCAAGGGCGCTGGGAAGTGACGCGGCCATaGCGAGGTATACGTGTGTGC +
Preference number: 2 (lower is better)
Translates to: LPQKEGFRFNHAHVQGRWEVTRP*RGIRVC
Trigger: GCACACACGTATACCTCGGCATGGCCGCGTCACTTC...CCAGCGCCCTTGCACATGGGCATGGTTGAATCTGAAACCCTCCTTCTGTGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372874.9
3UTR-3UTR CCA 90 bp GGGTTTCAGATTCAACCATGCCCATGTGCAAGGGCGCTGGTCCCTGGCCAGGGCACGTGTGTGCAGAAATaGACACATAGGGTTCAGGAG +
Preference number: 2 (lower is better)
Translates to: GFQIQPCPCARALVPGQGTCVQK*THRVQE
Trigger: CTCCTGAACCCTATGTGTCCATTTCTGCACACACGT...GCCCTGGCCAGGGACCAGCGCCCTTGCACATGGGCATGGTTGAATCTGAAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
3UTR-3UTR CCA 90 bp AGTGACGCGGCCATGCCGAGGTATACGTGTGTGCAGAAATGGACACATAGGGTTAAGGGCGCTGGTCCCTaGCCAGGGCACATAATCAGA +
Preference number: 2 (lower is better)
Translates to: SDAAMPRYTCVQKWTHRVKGAGP*PGHIIR
Trigger: TCTGATTATGTGCCCTGGCCAGGGACCAGCGCCCTT...AACCCTATGTGTCCATTTCTGCACACACGTATACCTCGGCATGGCCGCGTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
3UTR-3UTR TCA 90 bp TTCAGTACAAGTTGCCACAGAAGGAGGGTTTCAGATTCAACCATGCCCATGTGCGGTGACTCCACAGGGTaGAGGCTTGGAGGAGTGGCG +
Preference number: 2 (lower is better)
Translates to: FSTSCHRRRVSDSTMPMCGDSTG*RLGGVA
Trigger: CGCCACTCCTCCAAGCCTTCACCCTGTGGAGTCACC...GCACATGGGCATGGTTGAATCTGAAACCCTCCTTCTGTGGCAACTTGTACTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372874.9
3UTR-3UTR TCA 90 bp CATCCCATAGGCTTTATAGAGCAGGTCGAGAAGCTCCCTCTTTTCATCTTCTGGCTGCCCTGCAGAGGCTaGAGGTGGCATCCCATAGGC +
Preference number: 2 (lower is better)
Translates to: HPIGFIEQVEKLPLFIFWLPCRG*RWHPIG
Trigger: GCCTATGGGATGCCACCTTCAGCCTCTGCAGGGCAG...CCAGAAGATGAAAAGAGGGAGCTTCTCGACCTGCTCTATAAAGCCTATGGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536532.5
ENST00000539235.5
3UTR-3UTR GCA 90 bp TTTCAGATTCAACCATGCCCATGTGCAAGGGCGCTGGTCCCTGGCCAGGGCACACGAGGTATACGTGTGTaGAGAAATGGACACATAGGG +
Preference number: 2 (lower is better)
Translates to: FQIQPCPCARALVPGQGTRGIRV*RNGHIG
Trigger: CCCTATGTGTCCATTTCTGCACACACGTATACCTCG...TGTGCCCTGGCCAGGGACCAGCGCCCTTGCACATGGGCATGGTTGAATCTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
3UTR-3UTR TCA 90 bp GGTTTCAGATTCAACCATGCCCATGTGCAAGGGCGCTGGTCCCTGGCCAGGGCATCAGTAACTGACTATTaGGATCATGGTCTTCTTGGA +
Preference number: 2 (lower is better)
Translates to: GFRFNHAHVQGRWSLARASVTDY*DHGLLG
Trigger: TCCAAGAAGACCATGATCTCAATAGTCAGTTACTGA...TGCCCTGGCCAGGGACCAGCGCCCTTGCACATGGGCATGGTTGAATCTGAAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
3UTR-3UTR TCA 90 bp AACCATGCCCATGTGCAAGGGCGCTGGTCCCTGGCCAGGGCACATAATCAGAGAAGGAGCATCAGTAACTaGCTATTGAGATCATGGTCT +
Preference number: 2 (lower is better)
Translates to: NHAHVQGRWSLARAHNQRRSISN*LLRSWS
Trigger: AGACCATGATCTCAATAGTCAGTTACTGATGCTCCT...TCTCTGATTATGTGCCCTGGCCAGGGACCAGCGCCCTTGCACATGGGCATGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
3UTR-3UTR TCA 90 bp AACCATGCCCATGTGCAAGGGCGCTGGTCCCTGGCCAGGGCACATAATCAGAGATCAGTAACTGACTATTaGGATCATGGTCTTCTTGGA +
Preference number: 2 (lower is better)
Translates to: NHAHVQGRWSLARAHNQRSVTDY*DHGLLG
Trigger: TCCAAGAAGACCATGATCTCAATAGTCAGTTACTGA...TCTCTGATTATGTGCCCTGGCCAGGGACCAGCGCCCTTGCACATGGGCATGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
3UTR-3UTR TCA 90 bp TCCCATAGGCTTTATAGAGCAGGTCGAGAAGCTCCCTCTTTTCATCTTCTGGGACCAGCCGCTCTGTCTTaGGTATGTCCACAGCCTCTT +
Preference number: 2 (lower is better)
Translates to: SHRLYRAGREAPSFHLLGPAALS*VCPQPL
Trigger: AAGAGGCTGTGGACATACTCAAGACAGAGCGGCTGG...TCCCAGAAGATGAAAAGAGGGAGCTTCTCGACCTGCTCTATAAAGCCTATGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539235.5
3UTR-3UTR CCA 90 bp TCCCATAGGCTTTATAGAGCAGGTCGAGAAGCTCCCTCTTTTCATCTTCTGGGAGAAGGCTTGGAGGAGTaGCGTCTTCAGAGGTTCTGC +
Preference number: 2 (lower is better)
Translates to: SHRLYRAGREAPSFHLLGEGLEE*RLQRFC
Trigger: GCAGAACCTCTGAAGACGCCACTCCTCCAAGCCTTC...TCCCAGAAGATGAAAAGAGGGAGCTTCTCGACCTGCTCTATAAAGCCTATGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536532.5
ENST00000539235.5
3UTR-3UTR GCA 90 bp GTTCAGCCTTTTAAACTCCTCTTCAGTAAAGCCCATGTCCCGTTTGGTCATCTGGGGCAGATCTCGAAGTaGATGTTTTCCTGCCGCAGC +
Preference number: 2 (lower is better)
Translates to: VQPFKLLFSKAHVPFGHLGQISK*MFSCRS
Trigger: GCTGCGGCAGGAAAACATGCACTTCGAGATCTGCCC...CAGATGACCAAACGGGACATGGGCTTTACTGAAGAGGAGTTTAAAAGGCTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539235.5
3UTR-3UTR GCA 90 bp TCCCATAGGCTTTATAGAGCAGGTCGAGAAGCTCCCTCTTTTCATCTTCTGGGATTTCAGATTCAACCATaGCCATGTGCAAGGGCGCTG +
Preference number: 2 (lower is better)
Translates to: SHRLYRAGREAPSFHLLGFQIQP*PCARAL
Trigger: CAGCGCCCTTGCACATGGGCATGGTTGAATCTGAAA...TCCCAGAAGATGAAAAGAGGGAGCTTCTCGACCTGCTCTATAAAGCCTATGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536532.5
3UTR-3UTR GCA 90 bp CGAGGTATACGTGTGTGCAGAAATGGACACATAGGGTTCAGGAGCATCAGTAACCGAGGTATACGTGTGTaGAGAAATGGACACATAGGG +
Preference number: 2 (lower is better)
Translates to: RGIRVCRNGHIGFRSISNRGIRV*RNGHIG
Trigger: CCCTATGTGTCCATTTCTGCACACACGTATACCTCG...GTTACTGATGCTCCTGAACCCTATGTGTCCATTTCTGCACACACGTATACCTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
3UTR-3UTR CCA 90 bp GTTCAGCCTTTTAAACTCCTCTTCAGTAAAGCCCATGTCCCGTTTGGTCATCTGAGCCCATGTCCCGTTTaGTCATCTGGTAATCAGTGT +
Preference number: 2 (lower is better)
Translates to: VQPFKLLFSKAHVPFGHLSPCPV*SSGNQC
Trigger: ACACTGATTACCAGATGACCAAACGGGACATGGGCT...CAGATGACCAAACGGGACATGGGCTTTACTGAAGAGGAGTTTAAAAGGCTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536532.5
ENST00000539235.5
3UTR-3UTR CCA 90 bp TCTTCTGGGAGGAAACTAGATTTGGCCGCATTGATGTTCAGCCTTTTAAACTCCAGCCCATGTCCCGTTTaGTCATCTGGTAATCAGTGT +
Preference number: 2 (lower is better)
Translates to: SSGRKLDLAALMFSLLNSSPCPV*SSGNQC
Trigger: ACACTGATTACCAGATGACCAAACGGGACATGGGCT...GGAGTTTAAAAGGCTGAACATCAATGCGGCCAAATCTAGTTTCCTCCCAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536532.5
ENST00000539235.5
3UTR CCA 72 bp GATTCAACCATGCCCATGTGCAAGGGCGCTGGTCCCTaGCCAGGGCACATAATCAGAGAAGTGACGCGGCCA +
Preference number: 3 (lower is better)
Translates to: DSTMPMCKGAGP*PGHIIREVTRP
Trigger: TGGCCGCGTCACTTCTCTGATTATGTGCCCTGGCCAGGGACCAGCGCCCTTGCACATGGGCATGGTTGAATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
3UTR CCA 72 bp GTTGGGGTGACTCCACAGGGTGAAGGCTTGGAGGAGTaGCGTCTTCAGAGGTTCTGCCCTGCAGAGGCTGAA +
Preference number: 3 (lower is better)
Translates to: VGVTPQGEGLEE*RLQRFCPAEAE
Trigger: TTCAGCCTCTGCAGGGCAGAACCTCTGAAGACGCCACTCCTCCAAGCCTTCACCCTGTGGAGTCACCCCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536532.5
3UTR GCA 72 bp CACAGAAGGAGGGTTTCAGATTCAACCATGCCCATGTaGAAGGGCGCTGGTCCCTGGCCAGGGCACATAATC +
Preference number: 3 (lower is better)
Translates to: HRRRVSDSTMPM*KGAGPWPGHII
Trigger: GATTATGTGCCCTGGCCAGGGACCAGCGCCCTTGCACATGGGCATGGTTGAATCTGAAACCCTCCTTCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
3UTR CCA 72 bp GGTTTCAGATTCAACCATGCCCATGTGCAAGGGCGCTaGTCCCTGGCCAGGGCACATAATCAGAGAAGTGAC +
Preference number: 3 (lower is better)
Translates to: GFRFNHAHVQGR*SLARAHNQRSD
Trigger: GTCACTTCTCTGATTATGTGCCCTGGCCAGGGACCAGCGCCCTTGCACATGGGCATGGTTGAATCTGAAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
3UTR-3UTR CAA 90 bp AGTGACGCGGCCATGCCGAGGTATACGTGTGTGCAGAAATGGACACATAGGGTTGTGTCCAGGGTGGACTaGAAGATGAGCGGGTCATCT +
Preference number: 3 (lower is better)
Translates to: SDAAMPRYTCVQKWTHRVVSRVD*KMSGSS
Trigger: AGATGACCCGCTCATCTTCAAGTCCACCCTGGACAC...AACCCTATGTGTCCATTTCTGCACACACGTATACCTCGGCATGGCCGCGTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536532.5
3UTR GCA 72 bp AGAGAAGTGACGCGGCCATGCCGAGGTATACGTGTGTaGAGAAATGGACACATAGGGTTCAGGAGCATCAGT +
Preference number: 3 (lower is better)
Translates to: REVTRPCRGIRV*RNGHIGFRSIS
Trigger: ACTGATGCTCCTGAACCCTATGTGTCCATTTCTGCACACACGTATACCTCGGCATGGCCGCGTCACTTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
3UTR GCA 72 bp TGGCCAGGGCACATAATCAGAGAAGTGACGCGGCCATaGCGAGGTATACGTGTGTGCAGAAATGGACACATA +
Preference number: 3 (lower is better)
Translates to: WPGHIIREVTRP*RGIRVCRNGHI
Trigger: TATGTGTCCATTTCTGCACACACGTATACCTCGGCATGGCCGCGTCACTTCTCTGATTATGTGCCCTGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
3UTR-3UTR CAA 90 bp TTCAGATTCAACCATGCCCATGTGCAAGGGCGCTGGTCCCTGGCCAGGGCACATATAAATGTAAAAATGTaGCTCAGCCCCACAGAGTTG +
Preference number: 3 (lower is better)
Translates to: FRFNHAHVQGRWSLARAHINVKM*LSPTEL
Trigger: CAACTCTGTGGGGCTGAGCAACATTTTTACATTTAT...ATGTGCCCTGGCCAGGGACCAGCGCCCTTGCACATGGGCATGGTTGAATCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
3UTR-3UTR CAA 90 bp AGATTCAACCATGCCCATGTGCAAGGGCGCTGGTCCCTGGCCAGGGCACATAATCCATGGGCTTCTTTATaGAGCACCAGATTTTCAGTA +
Preference number: 3 (lower is better)
Translates to: RFNHAHVQGRWSLARAHNPWASL*STRFSV
Trigger: TACTGAAAATCTGGTGCTCAATAAAGAAGCCCATGG...ATTATGTGCCCTGGCCAGGGACCAGCGCCCTTGCACATGGGCATGGTTGAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372874.9
3UTR-3UTR CAA 90 bp CATCCCATAGGCTTTATAGAGCAGGTCGAGAAGCTCCCTCTTTTCATCTTCTGGGTGTCCAGGGTGGACTaGAAGATGAGCGGGTCATCT +
Preference number: 3 (lower is better)
Translates to: HPIGFIEQVEKLPLFIFWVSRVD*KMSGSS
Trigger: AGATGACCCGCTCATCTTCAAGTCCACCCTGGACAC...CCAGAAGATGAAAAGAGGGAGCTTCTCGACCTGCTCTATAAAGCCTATGGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536532.5
ENST00000539235.5
3UTR-3UTR CAA 90 bp CACAGAAGGAGGGTTTCAGATTCAACCATGCCCATGTGCAAGGGCGCTGGTCCCATAAATGTAAAAATGTaGCTCAGCCCCACAGAGTTG +
Preference number: 3 (lower is better)
Translates to: HRRRVSDSTMPMCKGAGPINVKM*LSPTEL
Trigger: CAACTCTGTGGGGCTGAGCAACATTTTTACATTTAT...GGGACCAGCGCCCTTGCACATGGGCATGGTTGAATCTGAAACCCTCCTTCTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
3UTR-3UTR CAA 90 bp CTGGTAATCAGTGTCCAGGGTGGACTTGAAGATGAGCGGGTCATCTGTGTTGAGCTAGATTTGGCCGCATaGATGTTCAGCCTTTTAAAC +
Preference number: 3 (lower is better)
Translates to: LVISVQGGLEDERVICVELDLAA*MFSLLN
Trigger: GTTTAAAAGGCTGAACATCAATGCGGCCAAATCTAG...CTCAACACAGATGACCCGCTCATCTTCAAGTCCACCCTGGACACTGATTACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536532.5
ENST00000539235.5
3UTR-3UTR CAA 90 bp GCCGCATTGATGTTCAGCCTTTTAAACTCCTCTTCAGTAAAGCCCATGTCCCGTCTAGATTTGGCCGCATaGATGTTCAGCCTTTTAAAC +
Preference number: 3 (lower is better)
Translates to: AALMFSLLNSSSVKPMSRLDLAA*MFSLLN
Trigger: GTTTAAAAGGCTGAACATCAATGCGGCCAAATCTAG...ACGGGACATGGGCTTTACTGAAGAGGAGTTTAAAAGGCTGAACATCAATGCGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536532.5
ENST00000539235.5
CDS-3UTR GCA 90 bp GTGCAAGGGCGCTGGTCCCTGGCCAGGGCACATAATCAGAGAAGTGACGCGGCCGCCATGGTGCCCTCGTaGGCCCCGGCGCTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: VQGRWSLARAHNQRSDAAAMVPS*APALLP
Trigger: AGGGAGCAGCGCCGGGGCGCACGAGGGCACCATGGC...GGCCGCGTCACTTCTCTGATTATGTGCCCTGGCCAGGGACCAGCGCCCTTGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR GCA 90 bp GGGTTTCAGATTCAACCATGCCCATGTGCAAGGGCGCTGGTCCCTGGCCAGGGCCGCTCGGTGGGTCTCTaGCGGCTCGGTGGCCGCTCG +
Preference number: 4 (lower is better)
Translates to: GFQIQPCPCARALVPGQGRSVGL*RLGGRS
Trigger: CGAGCGGCCACCGAGCCGGCAGAGACCCACCGAGCG...GCCCTGGCCAGGGACCAGCGCCCTTGCACATGGGCATGGTTGAATCTGAAACCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR GCA 90 bp GGGCGCTGGTCCCTGGCCAGGGCACATAATCAGAGAAGTGACGCGGCCATGCCGGAGTTGGCCAGCAGGTaGGGACTGTACCGCACCTCC +
Preference number: 4 (lower is better)
Translates to: GRWSLARAHNQRSDAAMPELASR*GLYRTS
Trigger: GGAGGTGCGGTACAGTCCGCACCTGCTGGCCAACTC...CGGCATGGCCGCGTCACTTCTCTGATTATGTGCCCTGGCCAGGGACCAGCGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR GCA 90 bp GCTGGTCCCTGGCCAGGGCACATAATCAGAGAAGTGACGCGGCCATGCCGAGGTTCTCGCTCCCCCTCCTaGAGGCCCTGGCCCACTAGG +
Preference number: 4 (lower is better)
Translates to: AGPWPGHIIREVTRPCRGSRSPS*RPWPTR
Trigger: CCTAGTGGGCCAGGGCCTGCAGGAGGGGGAGCGAGA...ACCTCGGCATGGCCGCGTCACTTCTCTGATTATGTGCCCTGGCCAGGGACCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR CCA 90 bp TTCAGATTCAACCATGCCCATGTGCAAGGGCGCTGGTCCCTGGCCAGGGCACATTCCGCCGCCGCTCGGTaGGTCTCTGCCGGCTCGGTG +
Preference number: 4 (lower is better)
Translates to: FRFNHAHVQGRWSLARAHSAAAR*VSAGSV
Trigger: CACCGAGCCGGCAGAGACCCACCGAGCGGCGGCGGA...ATGTGCCCTGGCCAGGGACCAGCGCCCTTGCACATGGGCATGGTTGAATCTGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR TCA 90 bp GTTGCTCAGCCCCACAGAGTTGGGGTGACTCCACAGGGTGAAGGCTTGGAGGAGGGATGGACCGGGCCTTaGCCCCGAAGTCTCGCTCCC +
Preference number: 4 (lower is better)
Translates to: VAQPHRVGVTPQGEGLEEGWTGP*PRSLAP
Trigger: GGGAGCGAGACTTCGGGGTCAAGGCCCGGTCCATCC...CTCCTCCAAGCCTTCACCCTGTGGAGTCACCCCAACTCTGTGGGGCTGAGCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR CCA 90 bp GGGCGCTGGTCCCTGGCCAGGGCACATAATCAGAGAAGTGACGCGGCCATGCCGAGGTCCCCTTCAGCCTaGTTCCAGGGGATTGGCTCC +
Preference number: 4 (lower is better)
Translates to: GRWSLARAHNQRSDAAMPRSPSA*FQGIGS
Trigger: GGAGCCAATCCCCTGGAACCAGGCTGAAGGGGACCT...CGGCATGGCCGCGTCACTTCTCTGATTATGTGCCCTGGCCAGGGACCAGCGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR TCA 90 bp CATGTGCAAGGGCGCTGGTCCCTGGCCAGGGCACATAATCAGAGAAGTGACGCGCCACCTCGTCTGGGGTaGGGTCCCCTTCAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: HVQGRWSLARAHNQRSDAPPRLG*GPLQPG
Trigger: ACCAGGCTGAAGGGGACCTCACCCCAGACGAGGTGG...CGCGTCACTTCTCTGATTATGTGCCCTGGCCAGGGACCAGCGCCCTTGCACATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR TCA 90 bp TTCAGATTCAACCATGCCCATGTGCAAGGGCGCTGGTCCCTGGCCAGGGCACATGGATGGACCGGGCCTTaGCCCCGAAGTCTCGCTCCC +
Preference number: 4 (lower is better)
Translates to: FRFNHAHVQGRWSLARAHGWTGP*PRSLAP
Trigger: GGGAGCGAGACTTCGGGGTCAAGGCCCGGTCCATCC...ATGTGCCCTGGCCAGGGACCAGCGCCCTTGCACATGGGCATGGTTGAATCTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR TCA 90 bp GGGTTTCAGATTCAACCATGCCCATGTGCAAGGGCGCTGGTCCCTGGCCAGGGCGGTGACTCCACAGGGTaGAGGCTTGGAGGAGTGGCG +
Preference number: 4 (lower is better)
Translates to: GFQIQPCPCARALVPGQGGDSTG*RLGGVA
Trigger: CGCCACTCCTCCAAGCCTTCACCCTGTGGAGTCACC...GCCCTGGCCAGGGACCAGCGCCCTTGCACATGGGCATGGTTGAATCTGAAACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR GCA 90 bp TCATTTTTGAGCCGAATGACTGCATGCTCCGTGTCCGGCTTCCAGGCACCAGTGCGCTCGGTGGGTCTCTaGCGGCTCGGTGGCCGCTCG +
Preference number: 4 (lower is better)
Translates to: SFLSRMTACSVSGFQAPVRSVGL*RLGGRS
Trigger: CGAGCGGCCACCGAGCCGGCAGAGACCCACCGAGCG...CACTGGTGCCTGGAAGCCGGACACGGAGCATGCAGTCATTCGGCTCAAAAATGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539235.5
CDS-3UTR GCA 90 bp TCCCTGGCCAGGGCACATAATCAGAGAAGTGACGCGGCCATGCCGAGGTATACGTCTCGCTCCCCCTCCTaGAGGCCCTGGCCCACTAGG +
Preference number: 4 (lower is better)
Translates to: SLARAHNQRSDAAMPRYTSRSPS*RPWPTR
Trigger: CCTAGTGGGCCAGGGCCTGCAGGAGGGGGAGCGAGA...CGTATACCTCGGCATGGCCGCGTCACTTCTCTGATTATGTGCCCTGGCCAGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR CCA 90 bp TCCCTGGCCAGGGCACATAATCAGAGAAGTGACGCGGCCATGCCGAGGTATACGTCTCTGCCGGCTCGGTaGCCGCTCGGCTTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: SLARAHNQRSDAAMPRYTSLPAR*PLGFPW
Trigger: CCAGGGAAAGCCGAGCGGCCACCGAGCCGGCAGAGA...CGTATACCTCGGCATGGCCGCGTCACTTCTCTGATTATGTGCCCTGGCCAGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372874.9
CDS-3UTR CCA 90 bp CATGTGCAAGGGCGCTGGTCCCTGGCCAGGGCACATAATCAGAGAAGTGACGCGCCTTGGGGGACCAGTTaGGCTGGTGGCGCATGCAGC +
Preference number: 4 (lower is better)
Translates to: HVQGRWSLARAHNQRSDAPWGTS*AGGACS
Trigger: GCTGCATGCGCCACCAGCCCAACTGGTCCCCCAAGG...CGCGTCACTTCTCTGATTATGTGCCCTGGCCAGGGACCAGCGCCCTTGCACATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR TCA 90 bp TCCCTGGCCAGGGCACATAATCAGAGAAGTGACGCGGCCATGCCGAGGTATACGCCACCTCGTCTGGGGTaGGGTCCCCTTCAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: SLARAHNQRSDAAMPRYTPPRLG*GPLQPG
Trigger: ACCAGGCTGAAGGGGACCTCACCCCAGACGAGGTGG...CGTATACCTCGGCATGGCCGCGTCACTTCTCTGATTATGTGCCCTGGCCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR GCA 90 bp CCCTGGCCAGGGCACATAATCAGAGAAGTGACGCGGCCATGCCGAGGTATACGTTGGGCTGGTGGCGCATaGAGCACAGGATGGACCGGG +
Preference number: 4 (lower is better)
Translates to: PWPGHIIREVTRPCRGIRWAGGA*STGWTG
Trigger: CCCGGTCCATCCTGTGCTGCATGCGCCACCAGCCCA...ACGTATACCTCGGCATGGCCGCGTCACTTCTCTGATTATGTGCCCTGGCCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR CCA 90 bp GTTGCTCAGCCCCACAGAGTTGGGGTGACTCCACAGGGTGAAGGCTTGGAGGAGACAGCTCCACCACCTTaGGGGACCAGTTGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: VAQPHRVGVTPQGEGLEETAPPP*GTSWAG
Trigger: ACCAGCCCAACTGGTCCCCCAAGGTGGTGGAGCTGT...CTCCTCCAAGCCTTCACCCTGTGGAGTCACCCCAACTCTGTGGGGCTGAGCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR CCA 90 bp TTTCAGATTCAACCATGCCCATGTGCAAGGGCGCTGGTCCCTGGCCAGGGCACACATGTGCAAGGGCGCTaGTCCCTGGCCAGGGCACAT +
Preference number: 4 (lower is better)
Translates to: FQIQPCPCARALVPGQGTHVQGR*SLARAH
Trigger: ATGTGCCCTGGCCAGGGACCAGCGCCCTTGCACATG...TGTGCCCTGGCCAGGGACCAGCGCCCTTGCACATGGGCATGGTTGAATCTGAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR TCA 90 bp GGGCGCTGGTCCCTGGCCAGGGCACATAATCAGAGAAGTGACGCGGCCATGCCGAGATGGTTTCAGGCTTaGTGGATCCGTCTAGGTGGA +
Preference number: 4 (lower is better)
Translates to: GRWSLARAHNQRSDAAMPRWFQA*WIRLGG
Trigger: TCCACCTAGACGGATCCATCAAGCCTGAAACCATCT...CGGCATGGCCGCGTCACTTCTCTGATTATGTGCCCTGGCCAGGGACCAGCGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR TCA 90 bp TATGTCCACAGCCTCTTTTACTACTTCGGCCGAGCCCACCTCCCCGGCGTGGACGGAAGTCTGGAAGGGTaGGCGGCTTGTCCATGCCAA +
Preference number: 4 (lower is better)
Translates to: YVHSLFYYFGRAHLPGVDGSLEG*AACPCQ
Trigger: TTGGCATGGACAAGCCGCTCACCCTTCCAGACTTCC...GTCCACGCCGGGGAGGTGGGCTCGGCCGAAGTAGTAAAAGAGGCTGTGGACATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539235.5
CDS-3UTR GCA 90 bp AAGGGCGCTGGTCCCTGGCCAGGGCACATAATCAGAGAAGTGACGCGGCCATGCGTCCAGGCAAGAGGCTaGTTCCTGGGATGGTCTCAT +
Preference number: 4 (lower is better)
Translates to: KGAGPWPGHIIREVTRPCVQARG*FLGWSH
Trigger: ATGAGACCATCCCAGGAAGCAGCCTCTTGCCTGGAC...GCATGGCCGCGTCACTTCTCTGATTATGTGCCCTGGCCAGGGACCAGCGCCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR GCA 90 bp AGGGTTTCAGATTCAACCATGCCCATGTGCAAGGGCGCTGGTCCCTGGCCAGGGGAAGTGACGCGGCCATaGCGAGGTATACGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: RVSDSTMPMCKGAGPWPGEVTRP*RGIRVC
Trigger: GCACACACGTATACCTCGGCATGGCCGCGTCACTTC...CCCTGGCCAGGGACCAGCGCCCTTGCACATGGGCATGGTTGAATCTGAAACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR CCA 90 bp GGTTTCAGATTCAACCATGCCCATGTGCAAGGGCGCTGGTCCCTGGCCAGGGCACTTGGCCAGGAAGTCTaGAAGGGTGAGCGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: GFRFNHAHVQGRWSLARALGQEV*KGERLV
Trigger: GACAAGCCGCTCACCCTTCCAGACTTCCTGGCCAAG...TGCCCTGGCCAGGGACCAGCGCCCTTGCACATGGGCATGGTTGAATCTGAAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR CCA 90 bp GGGTTTCAGATTCAACCATGCCCATGTGCAAGGGCGCTGGTCCCTGGCCAGGGCCTGGTTCCAGGGGATTaGCTCCACTTTGGAGTTGGC +
Preference number: 4 (lower is better)
Translates to: GFQIQPCPCARALVPGQGLVPGD*LHFGVG
Trigger: GCCAACTCCAAAGTGGAGCCAATCCCCTGGAACCAG...GCCCTGGCCAGGGACCAGCGCCCTTGCACATGGGCATGGTTGAATCTGAAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR CCA 90 bp TGGTCCCTGGCCAGGGCACATAATCAGAGAAGTGACGCGGCCATGCCGAGGTATACAGCTCCACCACCTTaGGGGACCAGTTGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: WSLARAHNQRSDAAMPRYTAPPP*GTSWAG
Trigger: ACCAGCCCAACTGGTCCCCCAAGGTGGTGGAGCTGT...ATACCTCGGCATGGCCGCGTCACTTCTCTGATTATGTGCCCTGGCCAGGGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR TCA 90 bp GTTTCAGATTCAACCATGCCCATGTGCAAGGGCGCTGGTCCCTGGCCAGGGCACCCAGCCGCTCTGTCTTaGGTATGTCCACAGCCTCTT +
Preference number: 4 (lower is better)
Translates to: VSDSTMPMCKGAGPWPGHPAALS*VCPQPL
Trigger: AAGAGGCTGTGGACATACTCAAGACAGAGCGGCTGG...GTGCCCTGGCCAGGGACCAGCGCCCTTGCACATGGGCATGGTTGAATCTGAAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR GCA 90 bp TTCAGTACAAGTTGCCACAGAAGGAGGGTTTCAGATTCAACCATGCCCATGTGCGCCATGGTGCCCTCGTaGGCCCCGGCGCTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: FSTSCHRRRVSDSTMPMCAMVPS*APALLP
Trigger: AGGGAGCAGCGCCGGGGCGCACGAGGGCACCATGGC...GCACATGGGCATGGTTGAATCTGAAACCCTCCTTCTGTGGCAACTTGTACTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372874.9
CDS-3UTR GCA 90 bp AAGGGCGCTGGTCCCTGGCCAGGGCACATAATCAGAGAAGTGACGCGGCCATGCCCGTCTAGGTGGACATaGAGTTCCACTTTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: KGAGPWPGHIIREVTRPCPSRWT*SSTLGL
Trigger: CAAGCCCAAAGTGGAACTGCATGTCCACCTAGACGG...GCATGGCCGCGTCACTTCTCTGATTATGTGCCCTGGCCAGGGACCAGCGCCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR GCA 90 bp AGGGTTTCAGATTCAACCATGCCCATGTGCAAGGGCGCTGGTCCCTGGCCAGGGGGACAGTACGGTGAATaGCGCTCTTCACAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: RVSDSTMPMCKGAGPWPGGQYGE*RSSQPP
Trigger: AGGAGGCTGTGAAGAGCGGCATTCACCGTACTGTCC...CCCTGGCCAGGGACCAGCGCCCTTGCACATGGGCATGGTTGAATCTGAAACCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR GCA 90 bp CCCTGGCCAGGGCACATAATCAGAGAAGTGACGCGGCCATGCCGAGGTATACGTAGCCGAATGACTGCATaGTCCGTGTCCGGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: PWPGHIIREVTRPCRGIRSRMTA*SVSGFQ
Trigger: CTGGAAGCCGGACACGGAGCATGCAGTCATTCGGCT...ACGTATACCTCGGCATGGCCGCGTCACTTCTCTGATTATGTGCCCTGGCCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372874.9
CDS-3UTR CCA 90 bp CCCTGGCCAGGGCACATAATCAGAGAAGTGACGCGGCCATGCCGAGGTATACGTCTCTGCTGTGTTAGCTaGGAGGGCGATCCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: PWPGHIIREVTRPCRGIRLCCVS*EGDPSP
Trigger: AGGAGAGGGATCGCCCTCCCAGCTAACACAGCAGAG...ACGTATACCTCGGCATGGCCGCGTCACTTCTCTGATTATGTGCCCTGGCCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR CCA 90 bp CAGAGAAGTGACGCGGCCATGCCGAGGTATACGTGTGTGCAGAAATGGACACATGGGGACCAGTTGGGCTaGTGGCGCATGCAGCACAGG +
Preference number: 4 (lower is better)
Translates to: QRSDAAMPRYTCVQKWTHGDQLG*WRMQHR
Trigger: CCTGTGCTGCATGCGCCACCAGCCCAACTGGTCCCC...ATGTGTCCATTTCTGCACACACGTATACCTCGGCATGGCCGCGTCACTTCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR CCA 90 bp ATGCCCATGTGCAAGGGCGCTGGTCCCTGGCCAGGGCACATAATCAGAGAAGTGCTCCAGCCAGGTCAATaGCTACCACGGTCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: MPMCKGAGPWPGHIIREVLQPGQ*LPRSAA
Trigger: AGCAGCAGACCGTGGTAGCCATTGACCTGGCTGGAG...CACTTCTCTGATTATGTGCCCTGGCCAGGGACCAGCGCCCTTGCACATGGGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR GCA 90 bp ACAGAAGGAGGGTTTCAGATTCAACCATGCCCATGTGCAAGGGCGCTGGTCCCTGTTCAGCAGCCCCTCTaGTGTGTTAGCTGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: TEGGFQIQPCPCARALVPVQQPL*CVSWEG
Trigger: GCCCTCCCAGCTAACACAGCAGAGGGGCTGCTGAAC...AGGGACCAGCGCCCTTGCACATGGGCATGGTTGAATCTGAAACCCTCCTTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR GCA 90 bp AGGCTGAAGGTGGCATCCCATAGGCTTTATAGAGCAGGTCGAGAAGCTCCCTCTGAGTTGGCCAGCAGGTaGGGACTGTACCGCACCTCC +
Preference number: 4 (lower is better)
Translates to: RLKVASHRLYRAGREAPSELASR*GLYRTS
Trigger: GGAGGTGCGGTACAGTCCGCACCTGCTGGCCAACTC...AGAGGGAGCTTCTCGACCTGCTCTATAAAGCCTATGGGATGCCACCTTCAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536532.5
CDS-3UTR GCA 90 bp GACGCGGCCATGCCGAGGTATACGTGTGTGCAGAAATGGACACATAGGGTTCAGTCAACCATGCCCATGTaGAAGGGCGCTGGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: DAAMPRYTCVQKWTHRVQSTMPM*KGAGPW
Trigger: CCAGGGACCAGCGCCCTTGCACATGGGCATGGTTGA...CTGAACCCTATGTGTCCATTTCTGCACACACGTATACCTCGGCATGGCCGCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR CCA 90 bp GTTCAGCCTTTTAAACTCCTCTTCAGTAAAGCCCATGTCCCGTTTGGTCATCTGTCCGCCGCCGCTCGGTaGGTCTCTGCCGGCTCGGTG +
Preference number: 4 (lower is better)
Translates to: VQPFKLLFSKAHVPFGHLSAAAR*VSAGSV
Trigger: CACCGAGCCGGCAGAGACCCACCGAGCGGCGGCGGA...CAGATGACCAAACGGGACATGGGCTTTACTGAAGAGGAGTTTAAAAGGCTGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536532.5
ENST00000539235.5
CDS-3UTR CCA 90 bp TCCCTGGCCAGGGCACATAATCAGAGAAGTGACGCGGCCATGCCGAGGTATACGGAAGGCTTGGAGGAGTaGCGTCTTCAGAGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: SLARAHNQRSDAAMPRYTEGLEE*RLQRFC
Trigger: GCAGAACCTCTGAAGACGCCACTCCTCCAAGCCTTC...CGTATACCTCGGCATGGCCGCGTCACTTCTCTGATTATGTGCCCTGGCCAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR CCA 90 bp AGTTGCCACAGAAGGAGGGTTTCAGATTCAACCATGCCCATGTGCAAGGGCGCTCATGTGCAAGGGCGCTaGTCCCTGGCCAGGGCACAT +
Preference number: 4 (lower is better)
Translates to: SCHRRRVSDSTMPMCKGAHVQGR*SLARAH
Trigger: ATGTGCCCTGGCCAGGGACCAGCGCCCTTGCACATG...AGCGCCCTTGCACATGGGCATGGTTGAATCTGAAACCCTCCTTCTGTGGCAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372874.9
CDS-3UTR TCA 90 bp CATGTGCAAGGGCGCTGGTCCCTGGCCAGGGCACATAATCAGAGAAGTGACGCGAGATGGTTTCAGGCTTaGTGGATCCGTCTAGGTGGA +
Preference number: 4 (lower is better)
Translates to: HVQGRWSLARAHNQRSDARWFQA*WIRLGG
Trigger: TCCACCTAGACGGATCCATCAAGCCTGAAACCATCT...CGCGTCACTTCTCTGATTATGTGCCCTGGCCAGGGACCAGCGCCCTTGCACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR GCA 90 bp TGGTCCCTGGCCAGGGCACATAATCAGAGAAGTGACGCGGCCATGCCGAGGTATCCGTCTAGGTGGACATaGAGTTCCACTTTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: WSLARAHNQRSDAAMPRYPSRWT*SSTLGL
Trigger: CAAGCCCAAAGTGGAACTGCATGTCCACCTAGACGG...ATACCTCGGCATGGCCGCGTCACTTCTCTGATTATGTGCCCTGGCCAGGGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR GCA 90 bp AGTTGCCACAGAAGGAGGGTTTCAGATTCAACCATGCCCATGTGCAAGGGCGCTGTTCAGCAGCCCCTCTaGTGTGTTAGCTGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: SCHRRRVSDSTMPMCKGAVQQPL*CVSWEG
Trigger: GCCCTCCCAGCTAACACAGCAGAGGGGCTGCTGAAC...AGCGCCCTTGCACATGGGCATGGTTGAATCTGAAACCCTCCTTCTGTGGCAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372874.9
CDS-3UTR GCA 90 bp AGTGACGCGGCCATGCCGAGGTATACGTGTGTGCAGAAATGGACACATAGGGTTTCAACCATGCCCATGTaGAAGGGCGCTGGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: SDAAMPRYTCVQKWTHRVSTMPM*KGAGPW
Trigger: CCAGGGACCAGCGCCCTTGCACATGGGCATGGTTGA...AACCCTATGTGTCCATTTCTGCACACACGTATACCTCGGCATGGCCGCGTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR CCA 90 bp TTGATGTTCAGCCTTTTAAACTCCTCTTCAGTAAAGCCCATGTCCCGTTTGGTCTCCGCCGCCGCTCGGTaGGTCTCTGCCGGCTCGGTG +
Preference number: 4 (lower is better)
Translates to: LMFSLLNSSSVKPMSRLVSAAAR*VSAGSV
Trigger: CACCGAGCCGGCAGAGACCCACCGAGCGGCGGCGGA...GACCAAACGGGACATGGGCTTTACTGAAGAGGAGTTTAAAAGGCTGAACATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536532.5
ENST00000539235.5
CDS-3UTR CCA 90 bp CACCAGCCATGGGCTTCTTTATTGAGCACCAGATTTTCAGTACAAGTTGCCACACCCTCCTGCAGGCCCTaGCCCACTAGGGCCACCACC +
Preference number: 4 (lower is better)
Translates to: HQPWASLLSTRFSVQVATPSCRP*PTRATT
Trigger: GGTGGTGGCCCTAGTGGGCCAGGGCCTGCAGGAGGG...TGTGGCAACTTGTACTGAAAATCTGGTGCTCAATAAAGAAGCCCATGGCTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372874.9
CDS-3UTR CCA 90 bp ATAATCAGAGAAGTGACGCGGCCATGCCGAGGTATACGTGTGTGCAGAAATGGAGGGGACCAGTTGGGCTaGTGGCGCATGCAGCACAGG +
Preference number: 4 (lower is better)
Translates to: IIREVTRPCRGIRVCRNGGDQLG*WRMQHR
Trigger: CCTGTGCTGCATGCGCCACCAGCCCAACTGGTCCCC...TCCATTTCTGCACACACGTATACCTCGGCATGGCCGCGTCACTTCTCTGATTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR CCA 90 bp GCTGGTCCCTGGCCAGGGCACATAATCAGAGAAGTGACGCGGCCATGCCGAGGTACGTGTGTGCAGAAATaGACACATAGGGTTCAGGAG +
Preference number: 4 (lower is better)
Translates to: AGPWPGHIIREVTRPCRGTCVQK*THRVQE
Trigger: CTCCTGAACCCTATGTGTCCATTTCTGCACACACGT...ACCTCGGCATGGCCGCGTCACTTCTCTGATTATGTGCCCTGGCCAGGGACCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR TCA 90 bp TGGCATCCCATAGGCTTTATAGAGCAGGTCGAGAAGCTCCCTCTTTTCATCTTCGCTTCCAGGCACCAGTaGGGTAGCTGGACCAGGGGC +
Preference number: 4 (lower is better)
Translates to: WHPIGFIEQVEKLPLFIFASRHQ*GSWTRG
Trigger: GCCCCTGGTCCAGCTACCTCACTGGTGCCTGGAAGC...GAAGATGAAAAGAGGGAGCTTCTCGACCTGCTCTATAAAGCCTATGGGATGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539235.5
CDS-3UTR TCA 90 bp GTACAAGTTGCCACAGAAGGAGGGTTTCAGATTCAACCATGCCCATGTGCAAGGCTGCCCTGCAGAGGCTaGAGGTGGCATCCCATAGGC +
Preference number: 4 (lower is better)
Translates to: VQVATEGGFQIQPCPCARLPCRG*RWHPIG
Trigger: GCCTATGGGATGCCACCTTCAGCCTCTGCAGGGCAG...CCTTGCACATGGGCATGGTTGAATCTGAAACCCTCCTTCTGTGGCAACTTGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372874.9
CDS-3UTR GCA 90 bp GCTGGTCCCTGGCCAGGGCACATAATCAGAGAAGTGACGCGGCCATGCCGAGGTCGATCCCTCTCCTCCTaGCATAGTATAAGATGGTTT +
Preference number: 4 (lower is better)
Translates to: AGPWPGHIIREVTRPCRGRSLSS*HSIRWF
Trigger: AAACCATCTTATACTATGGCAGGAGGAGAGGGATCG...ACCTCGGCATGGCCGCGTCACTTCTCTGATTATGTGCCCTGGCCAGGGACCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR GCA 90 bp GACGCGGCCATGCCGAGGTATACGTGTGTGCAGAAATGGACACATAGGGTTCAGGTCCAGGCAAGAGGCTaGTTCCTGGGATGGTCTCAT +
Preference number: 4 (lower is better)
Translates to: DAAMPRYTCVQKWTHRVQVQARG*FLGWSH
Trigger: ATGAGACCATCCCAGGAAGCAGCCTCTTGCCTGGAC...CTGAACCCTATGTGTCCATTTCTGCACACACGTATACCTCGGCATGGCCGCGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR GCA 90 bp ACAGAAGGAGGGTTTCAGATTCAACCATGCCCATGTGCAAGGGCGCTGGTCCCTGGGCAGATCTCGAAGTaGATGTTTTCCTGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: TEGGFQIQPCPCARALVPGQISK*MFSCRS
Trigger: GCTGCGGCAGGAAAACATGCACTTCGAGATCTGCCC...AGGGACCAGCGCCCTTGCACATGGGCATGGTTGAATCTGAAACCCTCCTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372874.9
CDS-3UTR GCA 90 bp GTGGTAGCCGTGTCCCAGCCGCTCTGTCTTGAGTATGTCCACAGCCTCTTTTACGGGCAGATCTCGAAGTaGATGTTTTCCTGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: VVAVSQPLCLEYVHSLFYGQISK*MFSCRS
Trigger: GCTGCGGCAGGAAAACATGCACTTCGAGATCTGCCC...GTAAAAGAGGCTGTGGACATACTCAAGACAGAGCGGCTGGGACACGGCTACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539235.5
CDS-3UTR GCA 90 bp GTAGCCGTGTCCCAGCCGCTCTGTCTTGAGTATGTCCACAGCCTCTTTTACTACAGCCGAATGACTGCATaGTCCGTGTCCGGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: VAVSQPLCLEYVHSLFYYSRMTA*SVSGFQ
Trigger: CTGGAAGCCGGACACGGAGCATGCAGTCATTCGGCT...GTAGTAAAAGAGGCTGTGGACATACTCAAGACAGAGCGGCTGGGACACGGCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539235.5
CDS-3UTR GCA 90 bp CAGAGAAGTGACGCGGCCATGCCGAGGTATACGTGTGTGCAGAAATGGACACATGAAGTGACGCGGCCATaGCGAGGTATACGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: QRSDAAMPRYTCVQKWTHEVTRP*RGIRVC
Trigger: GCACACACGTATACCTCGGCATGGCCGCGTCACTTC...ATGTGTCCATTTCTGCACACACGTATACCTCGGCATGGCCGCGTCACTTCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR GCA 90 bp AGTGCATGTTTTCCTGCCGCAGCCTGTTATAAAGGGCCTGGTCTTCCAGGGTGTGGACAGTACGGTGAATaGCGCTCTTCACAGCCTCGC +
Preference number: 4 (lower is better)
Translates to: SACFPAAACYKGPGLPGCGQYGE*RSSQPR
Trigger: GCGAGGCTGTGAAGAGCGGCATTCACCGTACTGTCC...ACACCCTGGAAGACCAGGCCCTTTATAACAGGCTGCGGCAGGAAAACATGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539235.5
CDS-3UTR CCA 90 bp GCATGCCACCAGCCATGGGCTTCTTTATTGAGCACCAGATTTTCAGTACAAGTTTCGAAGGCGGGCGTCTaGGCCATGGTGCCCTCGTGC +
Preference number: 4 (lower is better)
Translates to: ACHQPWASLLSTRFSVQVSKAGV*AMVPSC
Trigger: GCACGAGGGCACCATGGCCCAGACGCCCGCCTTCGA...AACTTGTACTGAAAATCTGGTGCTCAATAAAGAAGCCCATGGCTGGTGGCATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372874.9
CDS-3UTR CCA 90 bp GGTTTCAGATTCAACCATGCCCATGTGCAAGGGCGCTGGTCCCTGGCCAGGGCAATGGATCCGTCTAGGTaGACATGCAGTTCCACTTTG +
Preference number: 4 (lower is better)
Translates to: GFRFNHAHVQGRWSLARAMDPSR*TCSSTL
Trigger: CAAAGTGGAACTGCATGTCCACCTAGACGGATCCAT...TGCCCTGGCCAGGGACCAGCGCCCTTGCACATGGGCATGGTTGAATCTGAAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR CCA 90 bp GTTGCTCAGCCCCACAGAGTTGGGGTGACTCCACAGGGTGAAGGCTTGGAGGAGATGGATCCGTCTAGGTaGACATGCAGTTCCACTTTG +
Preference number: 4 (lower is better)
Translates to: VAQPHRVGVTPQGEGLEEMDPSR*TCSSTL
Trigger: CAAAGTGGAACTGCATGTCCACCTAGACGGATCCAT...CTCCTCCAAGCCTTCACCCTGTGGAGTCACCCCAACTCTGTGGGGCTGAGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR CCA 90 bp GTATGTCCACAGCCTCTTTTACTACTTCGGCCGAGCCCACCTCCCCGGCGTGGAATGGATCCGTCTAGGTaGACATGCAGTTCCACTTTG +
Preference number: 4 (lower is better)
Translates to: VCPQPLLLLRPSPPPRRGMDPSR*TCSSTL
Trigger: CAAAGTGGAACTGCATGTCCACCTAGACGGATCCAT...TCCACGCCGGGGAGGTGGGCTCGGCCGAAGTAGTAAAAGAGGCTGTGGACATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539235.5
CDS-3UTR CCA 90 bp CAGAGAAGTGACGCGGCCATGCCGAGGTATACGTGTGTGCAGAAATGGACACATGCTCCACTTTGGAGTTaGCCAGCAGGTGCGGACTGT +
Preference number: 4 (lower is better)
Translates to: QRSDAAMPRYTCVQKWTHAPLWS*PAGADC
Trigger: ACAGTCCGCACCTGCTGGCCAACTCCAAAGTGGAGC...ATGTGTCCATTTCTGCACACACGTATACCTCGGCATGGCCGCGTCACTTCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR CCA 90 bp GGTTTCAGATTCAACCATGCCCATGTGCAAGGGCGCTGGTCCCTGGCCAGGGCAAGCCCATGTCCCGTTTaGTCATCTGGTAATCAGTGT +
Preference number: 4 (lower is better)
Translates to: GFRFNHAHVQGRWSLARASPCPV*SSGNQC
Trigger: ACACTGATTACCAGATGACCAAACGGGACATGGGCT...TGCCCTGGCCAGGGACCAGCGCCCTTGCACATGGGCATGGTTGAATCTGAAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR CCA 90 bp TGTTTTCCTGCCGCAGCCTGTTATAAAGGGCCTGGTCTTCCAGGGTGTGGTAGCGAAGGCTTGGAGGAGTaGCGTCTTCAGAGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: CFPAAACYKGPGLPGCGSEGLEE*RLQRFC
Trigger: GCAGAACCTCTGAAGACGCCACTCCTCCAAGCCTTC...GCTACCACACCCTGGAAGACCAGGCCCTTTATAACAGGCTGCGGCAGGAAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539235.5
CDS-3UTR TCA 90 bp CTCCTCTTCAGTAAAGCCCATGTCCCGTTTGGTCATCTGGTAATCAGTGTCCAGGCGTGGACAGTACGGTaGATGCCGCTCTTCACAGCC +
Preference number: 4 (lower is better)
Translates to: LLFSKAHVPFGHLVISVQAWTVR*MPLFTA
Trigger: GGCTGTGAAGAGCGGCATTCACCGTACTGTCCACGC...CTGGACACTGATTACCAGATGACCAAACGGGACATGGGCTTTACTGAAGAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536532.5
ENST00000539235.5
CDS-3UTR TCA 90 bp CACCAGCCATGGGCTTCTTTATTGAGCACCAGATTTTCAGTACAAGTTGCCACAGCTTCCAGGCACCAGTaGGGTAGCTGGACCAGGGGC +
Preference number: 4 (lower is better)
Translates to: HQPWASLLSTRFSVQVATASRHQ*GSWTRG
Trigger: GCCCCTGGTCCAGCTACCTCACTGGTGCCTGGAAGC...TGTGGCAACTTGTACTGAAAATCTGGTGCTCAATAAAGAAGCCCATGGCTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372874.9
CDS-3UTR TCA 90 bp CGAGGTATACGTGTGTGCAGAAATGGACACATAGGGTTCAGGAGCATCAGTAACCTGCCCTGCAGAGGCTaGAGGTGGCATCCCATAGGC +
Preference number: 4 (lower is better)
Translates to: RGIRVCRNGHIGFRSISNLPCRG*RWHPIG
Trigger: GCCTATGGGATGCCACCTTCAGCCTCTGCAGGGCAG...GTTACTGATGCTCCTGAACCCTATGTGTCCATTTCTGCACACACGTATACCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR GCA 90 bp GCATGCCACCAGCCATGGGCTTCTTTATTGAGCACCAGATTTTCAGTACAAGTTTGGGCTGGTGGCGCATaGAGCACAGGATGGACCGGG +
Preference number: 4 (lower is better)
Translates to: ACHQPWASLLSTRFSVQVWAGGA*STGWTG
Trigger: CCCGGTCCATCCTGTGCTGCATGCGCCACCAGCCCA...AACTTGTACTGAAAATCTGGTGCTCAATAAAGAAGCCCATGGCTGGTGGCATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372874.9
CDS-3UTR GCA 90 bp TTGCCACAGAAGGAGGGTTTCAGATTCAACCATGCCCATGTGCAAGGGCGCTGGGCTACCACGGTCTGCTaGTGGTACTTCTTACACAGC +
Preference number: 4 (lower is better)
Translates to: LPQKEGFRFNHAHVQGRWATTVC*WYFLHS
Trigger: GCTGTGTAAGAAGTACCAGCAGCAGACCGTGGTAGC...CCAGCGCCCTTGCACATGGGCATGGTTGAATCTGAAACCCTCCTTCTGTGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372874.9
CDS-3UTR CCA 90 bp CTCTTCAGTAAAGCCCATGTCCCGTTTGGTCATCTGGTAATCAGTGTCCAGGGTAGGTCCCCTTCAGCCTaGTTCCAGGGGATTGGCTCC +
Preference number: 4 (lower is better)
Translates to: LFSKAHVPFGHLVISVQGRSPSA*FQGIGS
Trigger: GGAGCCAATCCCCTGGAACCAGGCTGAAGGGGACCT...ACCCTGGACACTGATTACCAGATGACCAAACGGGACATGGGCTTTACTGAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536532.5
CDS-3UTR CCA 90 bp TCATCTTCTGGGAGGAAACTAGATTTGGCCGCATTGATGTTCAGCCTTTTAAACCCCTCCTGCAGGCCCTaGCCCACTAGGGCCACCACC +
Preference number: 4 (lower is better)
Translates to: SSSGRKLDLAALMFSLLNPSCRP*PTRATT
Trigger: GGTGGTGGCCCTAGTGGGCCAGGGCCTGCAGGAGGG...GTTTAAAAGGCTGAACATCAATGCGGCCAAATCTAGTTTCCTCCCAGAAGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536532.5
CDS-3UTR CCA 90 bp ATGCCCATGTGCAAGGGCGCTGGTCCCTGGCCAGGGCACATAATCAGAGAAGTGACGTGTGTGCAGAAATaGACACATAGGGTTCAGGAG +
Preference number: 4 (lower is better)
Translates to: MPMCKGAGPWPGHIIREVTCVQK*THRVQE
Trigger: CTCCTGAACCCTATGTGTCCATTTCTGCACACACGT...CACTTCTCTGATTATGTGCCCTGGCCAGGGACCAGCGCCCTTGCACATGGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR TCA 90 bp CAGTACAAGTTGCCACAGAAGGAGGGTTTCAGATTCAACCATGCCCATGTGCAAGCGTGGACAGTACGGTaGATGCCGCTCTTCACAGCC +
Preference number: 4 (lower is better)
Translates to: QYKLPQKEGFRFNHAHVQAWTVR*MPLFTA
Trigger: GGCTGTGAAGAGCGGCATTCACCGTACTGTCCACGC...TTGCACATGGGCATGGTTGAATCTGAAACCCTCCTTCTGTGGCAACTTGTACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372874.9
CDS-3UTR TCA 90 bp CACCAGCCATGGGCTTCTTTATTGAGCACCAGATTTTCAGTACAAGTTGCCACAGGTGACTCCACAGGGTaGAGGCTTGGAGGAGTGGCG +
Preference number: 4 (lower is better)
Translates to: HQPWASLLSTRFSVQVATGDSTG*RLGGVA
Trigger: CGCCACTCCTCCAAGCCTTCACCCTGTGGAGTCACC...TGTGGCAACTTGTACTGAAAATCTGGTGCTCAATAAAGAAGCCCATGGCTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372874.9
CDS-3UTR GCA 90 bp AGGCTGAAGGTGGCATCCCATAGGCTTTATAGAGCAGGTCGAGAAGCTCCCTCTCCGTCTAGGTGGACATaGAGTTCCACTTTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: RLKVASHRLYRAGREAPSPSRWT*SSTLGL
Trigger: CAAGCCCAAAGTGGAACTGCATGTCCACCTAGACGG...AGAGGGAGCTTCTCGACCTGCTCTATAAAGCCTATGGGATGCCACCTTCAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536532.5
ENST00000539235.5
CDS-3UTR CCA 90 bp AGATTCAACCATGCCCATGTGCAAGGGCGCTGGTCCCTGGCCAGGGCACATAATTGTAGTAGTCAAACTTaGCCAGGAAGTCTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: RFNHAHVQGRWSLARAHNCSSQT*PGSLEG
Trigger: CCCTTCCAGACTTCCTGGCCAAGTTTGACTACTACA...ATTATGTGCCCTGGCCAGGGACCAGCGCCCTTGCACATGGGCATGGTTGAATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR CCA 90 bp GTACAAGTTGCCACAGAAGGAGGGTTTCAGATTCAACCATGCCCATGTGCAAGGGCTCCACTTTGGAGTTaGCCAGCAGGTGCGGACTGT +
Preference number: 4 (lower is better)
Translates to: VQVATEGGFQIQPCPCARAPLWS*PAGADC
Trigger: ACAGTCCGCACCTGCTGGCCAACTCCAAAGTGGAGC...CCTTGCACATGGGCATGGTTGAATCTGAAACCCTCCTTCTGTGGCAACTTGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372874.9
CDS-3UTR TCA 90 bp CAGTACAAGTTGCCACAGAAGGAGGGTTTCAGATTCAACCATGCCCATGTGCAAGCTTGTCCATGCCAATaGCGTTCAGCAGCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: QYKLPQKEGFRFNHAHVQACPCQ*RSAAPL
Trigger: CAGAGGGGCTGCTGAACGTCATTGGCATGGACAAGC...TTGCACATGGGCATGGTTGAATCTGAAACCCTCCTTCTGTGGCAACTTGTACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372874.9
CDS-3UTR TCA 90 bp TCTGGGAGGAAACTAGATTTGGCCGCATTGATGTTCAGCCTTTTAAACTCCTCTCTGCCCTGCAGAGGCTaGAGGTGGCATCCCATAGGC +
Preference number: 4 (lower is better)
Translates to: SGRKLDLAALMFSLLNSSLPCRG*RWHPIG
Trigger: GCCTATGGGATGCCACCTTCAGCCTCTGCAGGGCAG...AGAGGAGTTTAAAAGGCTGAACATCAATGCGGCCAAATCTAGTTTCCTCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536532.5
ENST00000539235.5
CDS-3UTR GCA 90 bp ACAGAAGGAGGGTTTCAGATTCAACCATGCCCATGTGCAAGGGCGCTGGTCCCTCGAGGTATACGTGTGTaGAGAAATGGACACATAGGG +
Preference number: 4 (lower is better)
Translates to: TEGGFQIQPCPCARALVPRGIRV*RNGHIG
Trigger: CCCTATGTGTCCATTTCTGCACACACGTATACCTCG...AGGGACCAGCGCCCTTGCACATGGGCATGGTTGAATCTGAAACCCTCCTTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR GCA 90 bp CAGGGTGGACTTGAAGATGAGCGGGTCATCTGTGTTGAGCGAGTAGTTAGCCTGTTTCAGATTCAACCATaGCCATGTGCAAGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: QGGLEDERVICVERVVSLFQIQP*PCARAL
Trigger: CAGCGCCCTTGCACATGGGCATGGTTGAATCTGAAA...CAGGCTAACTACTCGCTCAACACAGATGACCCGCTCATCTTCAAGTCCACCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536532.5
CDS-3UTR CCA 90 bp TCCCATAGGCTTTATAGAGCAGGTCGAGAAGCTCCCTCTTTTCATCTTCTGGGACTCTGCTGTGTTAGCTaGGAGGGCGATCCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: SHRLYRAGREAPSFHLLGLCCVS*EGDPSP
Trigger: AGGAGAGGGATCGCCCTCCCAGCTAACACAGCAGAG...TCCCAGAAGATGAAAAGAGGGAGCTTCTCGACCTGCTCTATAAAGCCTATGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536532.5
ENST00000539235.5
CDS-3UTR CCA 90 bp GCATCCCATAGGCTTTATAGAGCAGGTCGAGAAGCTCCCTCTTTTCATCTTCTGCTTGGCCAGGAAGTCTaGAAGGGTGAGCGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: ASHRLYRAGREAPSFHLLLGQEV*KGERLV
Trigger: GACAAGCCGCTCACCCTTCCAGACTTCCTGGCCAAG...CAGAAGATGAAAAGAGGGAGCTTCTCGACCTGCTCTATAAAGCCTATGGGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536532.5
ENST00000539235.5
CDS-3UTR CCA 90 bp ACAGAAGGAGGGTTTCAGATTCAACCATGCCCATGTGCAAGGGCGCTGGTCCCTACACCACGCCCTCTTTaGCCTTCATCTCTACAAACT +
Preference number: 4 (lower is better)
Translates to: TEGGFQIQPCPCARALVPTPRPL*PSSLQT
Trigger: AGTTTGTAGAGATGAAGGCCAAAGAGGGCGTGGTGT...AGGGACCAGCGCCCTTGCACATGGGCATGGTTGAATCTGAAACCCTCCTTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR CCA 90 bp TTTAAACTCCTCTTCAGTAAAGCCCATGTCCCGTTTGGTCATCTGGTAATCAGTCCTTGGGGGACCAGTTaGGCTGGTGGCGCATGCAGC +
Preference number: 4 (lower is better)
Translates to: FKLLFSKAHVPFGHLVISPWGTS*AGGACS
Trigger: GCTGCATGCGCCACCAGCCCAACTGGTCCCCCAAGG...ACTGATTACCAGATGACCAAACGGGACATGGGCTTTACTGAAGAGGAGTTTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536532.5
CDS-3UTR CCA 90 bp TGGTCCCTGGCCAGGGCACATAATCAGAGAAGTGACGCGGCCATGCCGAGGTATCCTCTTTTCATCTTCTaGGAGGAAACTAGATTTGGC +
Preference number: 4 (lower is better)
Translates to: WSLARAHNQRSDAAMPRYPLFIF*EETRFG
Trigger: GCCAAATCTAGTTTCCTCCCAGAAGATGAAAAGAGG...ATACCTCGGCATGGCCGCGTCACTTCTCTGATTATGTGCCCTGGCCAGGGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR TCA 90 bp TTTCAGTACAAGTTGCCACAGAAGGAGGGTTTCAGATTCAACCATGCCCATGTGGGAAGTCTGGAAGGGTaGGCGGCTTGTCCATGCCAA +
Preference number: 4 (lower is better)
Translates to: FQYKLPQKEGFRFNHAHVGSLEG*AACPCQ
Trigger: TTGGCATGGACAAGCCGCTCACCCTTCCAGACTTCC...CACATGGGCATGGTTGAATCTGAAACCCTCCTTCTGTGGCAACTTGTACTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372874.9
CDS-3UTR TCA 90 bp GCCGCATTGATGTTCAGCCTTTTAAACTCCTCTTCAGTAAAGCCCATGTCCCGTCCAGCCGCTCTGTCTTaGGTATGTCCACAGCCTCTT +
Preference number: 4 (lower is better)
Translates to: AALMFSLLNSSSVKPMSRPAALS*VCPQPL
Trigger: AAGAGGCTGTGGACATACTCAAGACAGAGCGGCTGG...ACGGGACATGGGCTTTACTGAAGAGGAGTTTAAAAGGCTGAACATCAATGCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536532.5
ENST00000539235.5
CDS-3UTR GCA 90 bp ACTATTGAGATCATGGTCTTCTTGGAAGGAATAAATGTAAAAATGTTGCTCAGCCGCTCGGTGGGTCTCTaGCGGCTCGGTGGCCGCTCG +
Preference number: 4 (lower is better)
Translates to: TIEIMVFLEGINVKMLLSRSVGL*RLGGRS
Trigger: CGAGCGGCCACCGAGCCGGCAGAGACCCACCGAGCG...GCTGAGCAACATTTTTACATTTATTCCTTCCAAGAAGACCATGATCTCAATAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR GCA 90 bp TCTTCTGGGAGGAAACTAGATTTGGCCGCATTGATGTTCAGCCTTTTAAACTCCGTTCAGCAGCCCCTCTaGTGTGTTAGCTGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: SSGRKLDLAALMFSLLNSVQQPL*CVSWEG
Trigger: GCCCTCCCAGCTAACACAGCAGAGGGGCTGCTGAAC...GGAGTTTAAAAGGCTGAACATCAATGCGGCCAAATCTAGTTTCCTCCCAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536532.5
ENST00000539235.5
CDS-3UTR GCA 90 bp GTAATCAGTGTCCAGGGTGGACTTGAAGATGAGCGGGTCATCTGTGTTGAGCGAATGGCTACCACGGTCTaGTGCTGGTACTTCTTACAC +
Preference number: 4 (lower is better)
Translates to: VISVQGGLEDERVICVERMATTV*CWYFLH
Trigger: GTGTAAGAAGTACCAGCAGCAGACCGTGGTAGCCAT...TCGCTCAACACAGATGACCCGCTCATCTTCAAGTCCACCCTGGACACTGATTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536532.5
CDS-3UTR CCA 90 bp CAGAGAAGTGACGCGGCCATGCCGAGGTATACGTGTGTGCAGAAATGGACACATTGTAGTAGTCAAACTTaGCCAGGAAGTCTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: QRSDAAMPRYTCVQKWTHCSSQT*PGSLEG
Trigger: CCCTTCCAGACTTCCTGGCCAAGTTTGACTACTACA...ATGTGTCCATTTCTGCACACACGTATACCTCGGCATGGCCGCGTCACTTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR CCA 90 bp GCATGCCACCAGCCATGGGCTTCTTTATTGAGCACCAGATTTTCAGTACAAGTTGGATTGGCTCCACTTTaGAGTTGGCCAGCAGGTGCG +
Preference number: 4 (lower is better)
Translates to: ACHQPWASLLSTRFSVQVGLAPL*SWPAGA
Trigger: CGCACCTGCTGGCCAACTCCAAAGTGGAGCCAATCC...AACTTGTACTGAAAATCTGGTGCTCAATAAAGAAGCCCATGGCTGGTGGCATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372874.9
CDS-3UTR CCA 90 bp TGTCCCAGCCGCTCTGTCTTGAGTATGTCCACAGCCTCTTTTACTACTTCGGCCAGCCCATGTCCCGTTTaGTCATCTGGTAATCAGTGT +
Preference number: 4 (lower is better)
Translates to: CPSRSVLSMSTASFTTSASPCPV*SSGNQC
Trigger: ACACTGATTACCAGATGACCAAACGGGACATGGGCT...GGCCGAAGTAGTAAAAGAGGCTGTGGACATACTCAAGACAGAGCGGCTGGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539235.5
CDS-3UTR CCA 90 bp CGAGGTATACGTGTGTGCAGAAATGGACACATAGGGTTCAGGAGCATCAGTAACCACAGGGTGAAGGCTTaGAGGAGTGGCGTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: RGIRVCRNGHIGFRSISNHRVKA*RSGVFR
Trigger: TCTGAAGACGCCACTCCTCCAAGCCTTCACCCTGTG...GTTACTGATGCTCCTGAACCCTATGTGTCCATTTCTGCACACACGTATACCTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR CCA 90 bp CACCAGCCATGGGCTTCTTTATTGAGCACCAGATTTTCAGTACAAGTTGCCACAAAGGGCGCTGGTCCCTaGCCAGGGCACATAATCAGA +
Preference number: 4 (lower is better)
Translates to: HQPWASLLSTRFSVQVATKGAGP*PGHIIR
Trigger: TCTGATTATGTGCCCTGGCCAGGGACCAGCGCCCTT...TGTGGCAACTTGTACTGAAAATCTGGTGCTCAATAAAGAAGCCCATGGCTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372874.9
CDS-3UTR TCA 90 bp TCTGGGAGGAAACTAGATTTGGCCGCATTGATGTTCAGCCTTTTAAACTCCTCTGCTTGTCCATGCCAATaGCGTTCAGCAGCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: SGRKLDLAALMFSLLNSSACPCQ*RSAAPL
Trigger: CAGAGGGGCTGCTGAACGTCATTGGCATGGACAAGC...AGAGGAGTTTAAAAGGCTGAACATCAATGCGGCCAAATCTAGTTTCCTCCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536532.5
ENST00000539235.5
CDS-3UTR TCA 90 bp TCTTCTGGGAGGAAACTAGATTTGGCCGCATTGATGTTCAGCCTTTTAAACTCCGGAAGTCTGGAAGGGTaGGCGGCTTGTCCATGCCAA +
Preference number: 4 (lower is better)
Translates to: SSGRKLDLAALMFSLLNSGSLEG*AACPCQ
Trigger: TTGGCATGGACAAGCCGCTCACCCTTCCAGACTTCC...GGAGTTTAAAAGGCTGAACATCAATGCGGCCAAATCTAGTTTCCTCCCAGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536532.5
ENST00000539235.5
CDS-3UTR TCA 90 bp GTTCAGCCTTTTAAACTCCTCTTCAGTAAAGCCCATGTCCCGTTTGGTCATCTGCCAGCCGCTCTGTCTTaGGTATGTCCACAGCCTCTT +
Preference number: 4 (lower is better)
Translates to: VQPFKLLFSKAHVPFGHLPAALS*VCPQPL
Trigger: AAGAGGCTGTGGACATACTCAAGACAGAGCGGCTGG...CAGATGACCAAACGGGACATGGGCTTTACTGAAGAGGAGTTTAAAAGGCTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536532.5
ENST00000539235.5
CDS-3UTR TCA 90 bp ACAGAAGGAGGGTTTCAGATTCAACCATGCCCATGTGCAAGGGCGCTGGTCCCTAGGAGCATCAGTAACTaGCTATTGAGATCATGGTCT +
Preference number: 4 (lower is better)
Translates to: TEGGFQIQPCPCARALVPRSISN*LLRSWS
Trigger: AGACCATGATCTCAATAGTCAGTTACTGATGCTCCT...AGGGACCAGCGCCCTTGCACATGGGCATGGTTGAATCTGAAACCCTCCTTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR GCA 90 bp GCATGCCACCAGCCATGGGCTTCTTTATTGAGCACCAGATTTTCAGTACAAGTTGGACAGTACGGTGAATaGCGCTCTTCACAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: ACHQPWASLLSTRFSVQVGQYGE*RSSQPP
Trigger: AGGAGGCTGTGAAGAGCGGCATTCACCGTACTGTCC...AACTTGTACTGAAAATCTGGTGCTCAATAAAGAAGCCCATGGCTGGTGGCATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372874.9
CDS-3UTR GCA 90 bp GTACAAGTTGCCACAGAAGGAGGGTTTCAGATTCAACCATGCCCATGTGCAAGGTTTCAGATTCAACCATaGCCATGTGCAAGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: VQVATEGGFQIQPCPCARFQIQP*PCARAL
Trigger: CAGCGCCCTTGCACATGGGCATGGTTGAATCTGAAA...CCTTGCACATGGGCATGGTTGAATCTGAAACCCTCCTTCTGTGGCAACTTGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372874.9
CDS-3UTR CCA 90 bp CTAGATTTGGCCGCATTGATGTTCAGCCTTTTAAACTCCTCTTCAGTAAAGCCCCTCTGCTGTGTTAGCTaGGAGGGCGATCCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: LDLAALMFSLLNSSSVKPLCCVS*EGDPSP
Trigger: AGGAGAGGGATCGCCCTCCCAGCTAACACAGCAGAG...GGGCTTTACTGAAGAGGAGTTTAAAAGGCTGAACATCAATGCGGCCAAATCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536532.5
ENST00000539235.5
CDS-3UTR CCA 90 bp TCTTCTGGGAGGAAACTAGATTTGGCCGCATTGATGTTCAGCCTTTTAAACTCCGGATTGGCTCCACTTTaGAGTTGGCCAGCAGGTGCG +
Preference number: 4 (lower is better)
Translates to: SSGRKLDLAALMFSLLNSGLAPL*SWPAGA
Trigger: CGCACCTGCTGGCCAACTCCAAAGTGGAGCCAATCC...GGAGTTTAAAAGGCTGAACATCAATGCGGCCAAATCTAGTTTCCTCCCAGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536532.5
CDS-3UTR CCA 90 bp GTAATCAGTGTCCAGGGTGGACTTGAAGATGAGCGGGTCATCTGTGTTGAGCGAAGCCCATGTCCCGTTTaGTCATCTGGTAATCAGTGT +
Preference number: 4 (lower is better)
Translates to: VISVQGGLEDERVICVERSPCPV*SSGNQC
Trigger: ACACTGATTACCAGATGACCAAACGGGACATGGGCT...TCGCTCAACACAGATGACCCGCTCATCTTCAAGTCCACCCTGGACACTGATTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536532.5
ENST00000539235.5
CDS-3UTR TCA 90 bp TTCATCTTCTGGGAGGAAACTAGATTTGGCCGCATTGATGTTCAGCCTTTTAAAGCGTGGACAGTACGGTaGATGCCGCTCTTCACAGCC +
Preference number: 4 (lower is better)
Translates to: FIFWEETRFGRIDVQPFKAWTVR*MPLFTA
Trigger: GGCTGTGAAGAGCGGCATTCACCGTACTGTCCACGC...TTTAAAAGGCTGAACATCAATGCGGCCAAATCTAGTTTCCTCCCAGAAGATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536532.5
ENST00000539235.5
CDS-3UTR TCA 90 bp AGTGACGCGGCCATGCCGAGGTATACGTGTGTGCAGAAATGGACACATAGGGTTCATGGGCTTCTTTATTaGGCACCAGATTTTCAGTAC +
Preference number: 4 (lower is better)
Translates to: SDAAMPRYTCVQKWTHRVHGLLY*APDFQY
Trigger: GTACTGAAAATCTGGTGCTCAATAAAGAAGCCCATG...AACCCTATGTGTCCATTTCTGCACACACGTATACCTCGGCATGGCCGCGTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372874.9
CDS-3UTR GCA 90 bp GTTCAGCCTTTTAAACTCCTCTTCAGTAAAGCCCATGTCCCGTTTGGTCATCTGGCTACCACGGTCTGCTaGTGGTACTTCTTACACAGC +
Preference number: 4 (lower is better)
Translates to: VQPFKLLFSKAHVPFGHLATTVC*WYFLHS
Trigger: GCTGTGTAAGAAGTACCAGCAGCAGACCGTGGTAGC...CAGATGACCAAACGGGACATGGGCTTTACTGAAGAGGAGTTTAAAAGGCTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536532.5
CDS-3UTR GCA 90 bp CGAGGTATACGTGTGTGCAGAAATGGACACATAGGGTTCAGGAGCATCAGTAACATGGCTACCACGGTCTaGTGCTGGTACTTCTTACAC +
Preference number: 4 (lower is better)
Translates to: RGIRVCRNGHIGFRSISNMATTV*CWYFLH
Trigger: GTGTAAGAAGTACCAGCAGCAGACCGTGGTAGCCAT...GTTACTGATGCTCCTGAACCCTATGTGTCCATTTCTGCACACACGTATACCTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR GCA 90 bp CTCCTCTTCAGTAAAGCCCATGTCCCGTTTGGTCATCTGGTAATCAGTGTCCAGCGAGGTATACGTGTGTaGAGAAATGGACACATAGGG +
Preference number: 4 (lower is better)
Translates to: LLFSKAHVPFGHLVISVQRGIRV*RNGHIG
Trigger: CCCTATGTGTCCATTTCTGCACACACGTATACCTCG...CTGGACACTGATTACCAGATGACCAAACGGGACATGGGCTTTACTGAAGAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536532.5
CDS-3UTR CCA 90 bp TTTAAACTCCTCTTCAGTAAAGCCCATGTCCCGTTTGGTCATCTGGTAATCAGTCTTGGCCAGGAAGTCTaGAAGGGTGAGCGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: FKLLFSKAHVPFGHLVISLGQEV*KGERLV
Trigger: GACAAGCCGCTCACCCTTCCAGACTTCCTGGCCAAG...ACTGATTACCAGATGACCAAACGGGACATGGGCTTTACTGAAGAGGAGTTTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536532.5
ENST00000539235.5
CDS-3UTR CCA 90 bp ATCTTCTGGGAGGAAACTAGATTTGGCCGCATTGATGTTCAGCCTTTTAAACTCCTCCAGCCAGGTCAATaGCTACCACGGTCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: IFWEETRFGRIDVQPFKLLQPGQ*LPRSAA
Trigger: AGCAGCAGACCGTGGTAGCCATTGACCTGGCTGGAG...GAGTTTAAAAGGCTGAACATCAATGCGGCCAAATCTAGTTTCCTCCCAGAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536532.5
CDS-3UTR CCA 90 bp TCTTCTGGGAGGAAACTAGATTTGGCCGCATTGATGTTCAGCCTTTTAAACTCCGAAGGCTTGGAGGAGTaGCGTCTTCAGAGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: SSGRKLDLAALMFSLLNSEGLEE*RLQRFC
Trigger: GCAGAACCTCTGAAGACGCCACTCCTCCAAGCCTTC...GGAGTTTAAAAGGCTGAACATCAATGCGGCCAAATCTAGTTTCCTCCCAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536532.5
ENST00000539235.5
CDS-3UTR CCA 90 bp TTTAAACTCCTCTTCAGTAAAGCCCATGTCCCGTTTGGTCATCTGGTAATCAGTAAGGGCGCTGGTCCCTaGCCAGGGCACATAATCAGA +
Preference number: 4 (lower is better)
Translates to: FKLLFSKAHVPFGHLVISKGAGP*PGHIIR
Trigger: TCTGATTATGTGCCCTGGCCAGGGACCAGCGCCCTT...ACTGATTACCAGATGACCAAACGGGACATGGGCTTTACTGAAGAGGAGTTTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536532.5
CDS-3UTR CCA 90 bp CAGTACAAGTTGCCACAGAAGGAGGGTTTCAGATTCAACCATGCCCATGTGCAAACACCACGCCCTCTTTaGCCTTCATCTCTACAAACT +
Preference number: 4 (lower is better)
Translates to: QYKLPQKEGFRFNHAHVQTPRPL*PSSLQT
Trigger: AGTTTGTAGAGATGAAGGCCAAAGAGGGCGTGGTGT...TTGCACATGGGCATGGTTGAATCTGAAACCCTCCTTCTGTGGCAACTTGTACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372874.9
CDS-3UTR TCA 90 bp TTGATGTTCAGCCTTTTAAACTCCTCTTCAGTAAAGCCCATGTCCCGTTTGGTCAGATGGTTTCAGGCTTaGTGGATCCGTCTAGGTGGA +
Preference number: 4 (lower is better)
Translates to: LMFSLLNSSSVKPMSRLVRWFQA*WIRLGG
Trigger: TCCACCTAGACGGATCCATCAAGCCTGAAACCATCT...GACCAAACGGGACATGGGCTTTACTGAAGAGGAGTTTAAAAGGCTGAACATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536532.5
ENST00000539235.5
CDS-3UTR TCA 90 bp GTACAAGTTGCCACAGAAGGAGGGTTTCAGATTCAACCATGCCCATGTGCAAGGAGGAGCATCAGTAACTaGCTATTGAGATCATGGTCT +
Preference number: 4 (lower is better)
Translates to: VQVATEGGFQIQPCPCARRSISN*LLRSWS
Trigger: AGACCATGATCTCAATAGTCAGTTACTGATGCTCCT...CCTTGCACATGGGCATGGTTGAATCTGAAACCCTCCTTCTGTGGCAACTTGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372874.9
CDS-3UTR GCA 90 bp TGGCATCCCATAGGCTTTATAGAGCAGGTCGAGAAGCTCCCTCTTTTCATCTTCCGATCCCTCTCCTCCTaGCATAGTATAAGATGGTTT +
Preference number: 4 (lower is better)
Translates to: WHPIGFIEQVEKLPLFIFRSLSS*HSIRWF
Trigger: AAACCATCTTATACTATGGCAGGAGGAGAGGGATCG...GAAGATGAAAAGAGGGAGCTTCTCGACCTGCTCTATAAAGCCTATGGGATGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536532.5
ENST00000539235.5
CDS-3UTR CCA 90 bp TTCATCTTCTGGGAGGAAACTAGATTTGGCCGCATTGATGTTCAGCCTTTTAAACACAGGGTGAAGGCTTaGAGGAGTGGCGTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: FIFWEETRFGRIDVQPFKHRVKA*RSGVFR
Trigger: TCTGAAGACGCCACTCCTCCAAGCCTTCACCCTGTG...TTTAAAAGGCTGAACATCAATGCGGCCAAATCTAGTTTCCTCCCAGAAGATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536532.5
CDS-3UTR GCA 90 bp TTCATCTTCTGGGAGGAAACTAGATTTGGCCGCATTGATGTTCAGCCTTTTAAATTTGAGCCGAATGACTaGATGCTCCGTGTCCGGCTT +
Preference number: 4 (lower is better)
Translates to: FIFWEETRFGRIDVQPFKFEPND*MLRVRL
Trigger: AAGCCGGACACGGAGCATGCAGTCATTCGGCTCAAA...TTTAAAAGGCTGAACATCAATGCGGCCAAATCTAGTTTCCTCCCAGAAGATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539235.5
CDS-3UTR CCA 90 bp CGAGGTATACGTGTGTGCAGAAATGGACACATAGGGTTCAGGAGCATCAGTAACCCTCTTTTCATCTTCTaGGAGGAAACTAGATTTGGC +
Preference number: 4 (lower is better)
Translates to: RGIRVCRNGHIGFRSISNPLFIF*EETRFG
Trigger: GCCAAATCTAGTTTCCTCCCAGAAGATGAAAAGAGG...GTTACTGATGCTCCTGAACCCTATGTGTCCATTTCTGCACACACGTATACCTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR CCA 90 bp TCCCATAGGCTTTATAGAGCAGGTCGAGAAGCTCCCTCTTTTCATCTTCTGGGACCTCTTTTCATCTTCTaGGAGGAAACTAGATTTGGC +
Preference number: 4 (lower is better)
Translates to: SHRLYRAGREAPSFHLLGPLFIF*EETRFG
Trigger: GCCAAATCTAGTTTCCTCCCAGAAGATGAAAAGAGG...TCCCAGAAGATGAAAAGAGGGAGCTTCTCGACCTGCTCTATAAAGCCTATGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536532.5
ENST00000539235.5
CDS-3UTR TCA 90 bp TTTCAGTACAAGTTGCCACAGAAGGAGGGTTTCAGATTCAACCATGCCCATGTGTCAGTAACTGACTATTaGGATCATGGTCTTCTTGGA +
Preference number: 4 (lower is better)
Translates to: FQYKLPQKEGFRFNHAHVSVTDY*DHGLLG
Trigger: TCCAAGAAGACCATGATCTCAATAGTCAGTTACTGA...CACATGGGCATGGTTGAATCTGAAACCCTCCTTCTGTGGCAACTTGTACTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372874.9
CDS-3UTR GCA 90 bp TCATCTTCTGGGAGGAAACTAGATTTGGCCGCATTGATGTTCAGCCTTTTAAACCGATCCCTCTCCTCCTaGCATAGTATAAGATGGTTT +
Preference number: 4 (lower is better)
Translates to: SSSGRKLDLAALMFSLLNRSLSS*HSIRWF
Trigger: AAACCATCTTATACTATGGCAGGAGGAGAGGGATCG...GTTTAAAAGGCTGAACATCAATGCGGCCAAATCTAGTTTCCTCCCAGAAGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536532.5
ENST00000539235.5
CDS-3UTR CCA 90 bp TTCATCTTCTGGGAGGAAACTAGATTTGGCCGCATTGATGTTCAGCCTTTTAAATGTAGTAGTCAAACTTaGCCAGGAAGTCTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: FIFWEETRFGRIDVQPFKCSSQT*PGSLEG
Trigger: CCCTTCCAGACTTCCTGGCCAAGTTTGACTACTACA...TTTAAAAGGCTGAACATCAATGCGGCCAAATCTAGTTTCCTCCCAGAAGATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536532.5
ENST00000539235.5
CDS-3UTR CCA 90 bp ACTATTGAGATCATGGTCTTCTTGGAAGGAATAAATGTAAAAATGTTGCTCAGCCTGGTTCCAGGGGATTaGCTCCACTTTGGAGTTGGC +
Preference number: 4 (lower is better)
Translates to: TIEIMVFLEGINVKMLLSLVPGD*LHFGVG
Trigger: GCCAACTCCAAAGTGGAGCCAATCCCCTGGAACCAG...GCTGAGCAACATTTTTACATTTATTCCTTCCAAGAAGACCATGATCTCAATAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR GCA 90 bp ACTATTGAGATCATGGTCTTCTTGGAAGGAATAAATGTAAAAATGTTGCTCAGCTTTGAGCCGAATGACTaGATGCTCCGTGTCCGGCTT +
Preference number: 4 (lower is better)
Translates to: TIEIMVFLEGINVKMLLSFEPND*MLRVRL
Trigger: AAGCCGGACACGGAGCATGCAGTCATTCGGCTCAAA...GCTGAGCAACATTTTTACATTTATTCCTTCCAAGAAGACCATGATCTCAATAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372874.9
CDS-3UTR TCA 90 bp ATCTTCTGGGAGGAAACTAGATTTGGCCGCATTGATGTTCAGCCTTTTAAACTCTCAGTAACTGACTATTaGGATCATGGTCTTCTTGGA +
Preference number: 4 (lower is better)
Translates to: IFWEETRFGRIDVQPFKLSVTDY*DHGLLG
Trigger: TCCAAGAAGACCATGATCTCAATAGTCAGTTACTGA...GAGTTTAAAAGGCTGAACATCAATGCGGCCAAATCTAGTTTCCTCCCAGAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536532.5
CDS CCA 90 bp AGGTGGACATGCAGTTCCACTTTGGGCTTGTCGAAGGCGGGCGTCTaGGCCATGGTGCCCTCGTGCGCCCCGGCGCTGCTCCCTCCGCCG +
Preference number: 5 (lower is better)
Translates to: RWTCSSTLGLSKAGV*AMVPSCAPALLPPP
Trigger: CGGCGGAGGGAGCAGCGCCGGGGCGCACGAGGGCACCATGGCCCAGACGCCCGCCTTCGACAAGCCCAAAGTGGAACTGCATGTCCACCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000372874.9
ENST00000492931.5
ENST00000536532.5
ENST00000537820.1
ENST00000539235.5
ENST00000545776.5
CDS TCA 90 bp ACCAGTTGGGCTGGTGGCGCATGCAGCACAGGATGGACCGGGCCTTaGCCCCGAAGTCTCGCTCCCCCTCCTGCAGGCCCTGGCCCACTA +
Preference number: 5 (lower is better)
Translates to: TSWAGGACSTGWTGP*PRSLAPPPAGPGPL
Trigger: TAGTGGGCCAGGGCCTGCAGGAGGGGGAGCGAGACTTCGGGGTCAAGGCCCGGTCCATCCTGTGCTGCATGCGCCACCAGCCCAACTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000372874.9
ENST00000464097.5
ENST00000492931.5
ENST00000536532.5
ENST00000537820.1
CDS-3UTR CAA 90 bp GGGCGCTGGTCCCTGGCCAGGGCACATAATCAGAGAAGTGACGCGGCCATGCCGAGTTCCACTTTGGGCTaGTCGAAGGCGGGCGTCTGG +
Preference number: 5 (lower is better)
Translates to: GRWSLARAHNQRSDAAMPSSTLG*SKAGVW
Trigger: CCAGACGCCCGCCTTCGACAAGCCCAAAGTGGAACT...CGGCATGGCCGCGTCACTTCTCTGATTATGTGCCCTGGCCAGGGACCAGCGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR CAA 90 bp AGGGTTTCAGATTCAACCATGCCCATGTGCAAGGGCGCTGGTCCCTGGCCAGGGACCTTGGGGGACCAGTaGGGCTGGTGGCGCATGCAG +
Preference number: 5 (lower is better)
Translates to: RVSDSTMPMCKGAGPWPGTLGDQ*GWWRMQ
Trigger: CTGCATGCGCCACCAGCCCAACTGGTCCCCCAAGGT...CCCTGGCCAGGGACCAGCGCCCTTGCACATGGGCATGGTTGAATCTGAAACCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS CCA 90 bp GGTCCCCTTCAGCCTGGTTCCAGGGGATTGGCTCCACTTTGGAGTTaGCCAGCAGGTGCGGACTGTACCGCACCTCCACATACACCACGC +
Preference number: 5 (lower is better)
Translates to: GPLQPGSRGLAPLWS*PAGADCTAPPHTPR
Trigger: GCGTGGTGTATGTGGAGGTGCGGTACAGTCCGCACCTGCTGGCCAACTCCAAAGTGGAGCCAATCCCCTGGAACCAGGCTGAAGGGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372874.9
ENST00000492931.5
ENST00000536532.5
ENST00000537820.1
CDS-3UTR CAA 90 bp GTTTCAGATTCAACCATGCCCATGTGCAAGGGCGCTGGTCCCTGGCCAGGGCACGGCTCCACTTTGGAGTaGGCCAGCAGGTGCGGACTG +
Preference number: 5 (lower is better)
Translates to: VSDSTMPMCKGAGPWPGHGSTLE*ASRCGL
Trigger: CAGTCCGCACCTGCTGGCCAACTCCAAAGTGGAGCC...GTGCCCTGGCCAGGGACCAGCGCCCTTGCACATGGGCATGGTTGAATCTGAAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR CAA 90 bp TATGTCCACAGCCTCTTTTACTACTTCGGCCGAGCCCACCTCCCCGGCGTGGACAGTTCCACTTTGGGCTaGTCGAAGGCGGGCGTCTGG +
Preference number: 5 (lower is better)
Translates to: YVHSLFYYFGRAHLPGVDSSTLG*SKAGVW
Trigger: CCAGACGCCCGCCTTCGACAAGCCCAAAGTGGAACT...GTCCACGCCGGGGAGGTGGGCTCGGCCGAAGTAGTAAAAGAGGCTGTGGACATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539235.5
CDS-3UTR CAA 90 bp GGGTTTCAGATTCAACCATGCCCATGTGCAAGGGCGCTGGTCCCTGGCCAGGGCCCTGGTTCCAGGGGATaGGCTCCACTTTGGAGTTGG +
Preference number: 5 (lower is better)
Translates to: GFQIQPCPCARALVPGQGPGSRG*APLWSW
Trigger: CCAACTCCAAAGTGGAGCCAATCCCCTGGAACCAGG...GCCCTGGCCAGGGACCAGCGCCCTTGCACATGGGCATGGTTGAATCTGAAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR CAA 90 bp AAGGGCGCTGGTCCCTGGCCAGGGCACATAATCAGAGAAGTGACGCGGCCATGCCCTGGTTCCAGGGGATaGGCTCCACTTTGGAGTTGG +
Preference number: 5 (lower is better)
Translates to: KGAGPWPGHIIREVTRPCPGSRG*APLWSW
Trigger: CCAACTCCAAAGTGGAGCCAATCCCCTGGAACCAGG...GCATGGCCGCGTCACTTCTCTGATTATGTGCCCTGGCCAGGGACCAGCGCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR CAA 90 bp GCTGGTCCCTGGCCAGGGCACATAATCAGAGAAGTGACGCGGCCATGCCGAGGTCCCAGCCGCTCTGTCTaGAGTATGTCCACAGCCTCT +
Preference number: 5 (lower is better)
Translates to: AGPWPGHIIREVTRPCRGPSRSV*SMSTAS
Trigger: AGAGGCTGTGGACATACTCAAGACAGAGCGGCTGGG...ACCTCGGCATGGCCGCGTCACTTCTCTGATTATGTGCCCTGGCCAGGGACCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS CCA 90 bp AGCCTCCTGGTAGGCCTGGACATGTCCAGGCAAGAGGCTGCTTCCTaGGATGGTCTCATCTCCAGCCAGGTCAATGGCTACCACGGTCTG +
Preference number: 5 (lower is better)
Translates to: SLLVGLDMSRQEAAS*DGLISSQVNGYHGL
Trigger: CAGACCGTGGTAGCCATTGACCTGGCTGGAGATGAGACCATCCCAGGAAGCAGCCTCTTGCCTGGACATGTCCAGGCCTACCAGGAGGCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372874.9
ENST00000464097.5
ENST00000492931.5
ENST00000536532.5
CDS CCA 90 bp TCACTCACTCAGCCTGGTTCCAGGGGATTGGCTCCACTTTGGAGTTaGCCAGCAGGTGCGGACTGTACCGCACCTCCACATACACCACGC +
Preference number: 5 (lower is better)
Translates to: SLTQPGSRGLAPLWS*PAGADCTAPPHTPR
Trigger: GCGTGGTGTATGTGGAGGTGCGGTACAGTCCGCACCTGCTGGCCAACTCCAAAGTGGAGCCAATCCCCTGGAACCAGGCTGAGTGAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545776.5
CDS CCA 90 bp GGCCCATCACTCACTCAGCCTGGTTCCAGGGGATTGGCTCCACTTTaGAGTTGGCCAGCAGGTGCGGACTGTACCGCACCTCCACATACA +
Preference number: 5 (lower is better)
Translates to: GPSLTQPGSRGLAPL*SWPAGADCTAPPHT
Trigger: TGTATGTGGAGGTGCGGTACAGTCCGCACCTGCTGGCCAACTCCAAAGTGGAGCCAATCCCCTGGAACCAGGCTGAGTGAGTGATGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545776.5
CDS-3UTR CAA 90 bp AGGGTTTCAGATTCAACCATGCCCATGTGCAAGGGCGCTGGTCCCTGGCCAGGGACATGCAGTTCCACTTaGGGCTTGTCGAAGGCGGGC +
Preference number: 5 (lower is better)
Translates to: RVSDSTMPMCKGAGPWPGTCSST*GLSKAG
Trigger: GCCCGCCTTCGACAAGCCCAAAGTGGAACTGCATGT...CCCTGGCCAGGGACCAGCGCCCTTGCACATGGGCATGGTTGAATCTGAAACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR CAA 90 bp GTATGTCCACAGCCTCTTTTACTACTTCGGCCGAGCCCACCTCCCCGGCGTGGAGGAAGGGTGAGCGGCTaGTCCATGCCAATGACGTTC +
Preference number: 5 (lower is better)
Translates to: VCPQPLLLLRPSPPPRRGGRVSG*SMPMTF
Trigger: GAACGTCATTGGCATGGACAAGCCGCTCACCCTTCC...TCCACGCCGGGGAGGTGGGCTCGGCCGAAGTAGTAAAAGAGGCTGTGGACATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539235.5
CDS-3UTR CAA 90 bp GTTGCTCAGCCCCACAGAGTTGGGGTGACTCCACAGGGTGAAGGCTTGGAGGAGCCCAGCCGCTCTGTCTaGAGTATGTCCACAGCCTCT +
Preference number: 5 (lower is better)
Translates to: VAQPHRVGVTPQGEGLEEPSRSV*SMSTAS
Trigger: AGAGGCTGTGGACATACTCAAGACAGAGCGGCTGGG...CTCCTCCAAGCCTTCACCCTGTGGAGTCACCCCAACTCTGTGGGGCTGAGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS GCA 90 bp AAGGGTGAGCGGCTTGTCCATGCCAATGACGTTCAGCAGCCCCTCTaGTGTGTTAGCTGGGAGGGCGATCCCTCTCCTCCTGCCATAGTA +
Preference number: 5 (lower is better)
Translates to: KGERLVHANDVQQPL*CVSWEGDPSPPAIV
Trigger: TACTATGGCAGGAGGAGAGGGATCGCCCTCCCAGCTAACACAGCAGAGGGGCTGCTGAACGTCATTGGCATGGACAAGCCGCTCACCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000372874.9
ENST00000492931.5
ENST00000536076.1
ENST00000536532.5
ENST00000537820.1
ENST00000539235.5
ENST00000545776.5
CDS GCA 90 bp CCTGGGATGGTCTCATCTCCAGCCAGGTCAATGGCTACCACGGTCTaGTGCTGGTACTTCTTACACAGCTCCACCACCTTGGGGGACCAG +
Preference number: 5 (lower is better)
Translates to: PGMVSSPARSMATTV*CWYFLHSSTTLGDQ
Trigger: CTGGTCCCCCAAGGTGGTGGAGCTGTGTAAGAAGTACCAGCAGCAGACCGTGGTAGCCATTGACCTGGCTGGAGATGAGACCATCCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000372874.9
ENST00000464097.5
ENST00000492931.5
ENST00000536532.5
ENST00000537820.1
CDS-3UTR CAA 90 bp TGGTCCCTGGCCAGGGCACATAATCAGAGAAGTGACGCGGCCATGCCGAGGTATACATGCAGTTCCACTTaGGGCTTGTCGAAGGCGGGC +
Preference number: 5 (lower is better)
Translates to: WSLARAHNQRSDAAMPRYTCSST*GLSKAG
Trigger: GCCCGCCTTCGACAAGCCCAAAGTGGAACTGCATGT...ATACCTCGGCATGGCCGCGTCACTTCTCTGATTATGTGCCCTGGCCAGGGACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR CAA 90 bp CCCTGGCCAGGGCACATAATCAGAGAAGTGACGCGGCCATGCCGAGGTATACGTGGAAGGGTGAGCGGCTaGTCCATGCCAATGACGTTC +
Preference number: 5 (lower is better)
Translates to: PWPGHIIREVTRPCRGIRGRVSG*SMPMTF
Trigger: GAACGTCATTGGCATGGACAAGCCGCTCACCCTTCC...ACGTATACCTCGGCATGGCCGCGTCACTTCTCTGATTATGTGCCCTGGCCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR CAA 90 bp AGATTCAACCATGCCCATGTGCAAGGGCGCTGGTCCCTGGCCAGGGCACATAATGGGATTGGCTCCACTTaGGAGTTGGCCAGCAGGTGC +
Preference number: 5 (lower is better)
Translates to: RFNHAHVQGRWSLARAHNGIGST*ELASRC
Trigger: GCACCTGCTGGCCAACTCCAAAGTGGAGCCAATCCC...ATTATGTGCCCTGGCCAGGGACCAGCGCCCTTGCACATGGGCATGGTTGAATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR CAA 90 bp GTTTCAGATTCAACCATGCCCATGTGCAAGGGCGCTGGTCCCTGGCCAGGGCACGTGTCCAGGGTGGACTaGAAGATGAGCGGGTCATCT +
Preference number: 5 (lower is better)
Translates to: VSDSTMPMCKGAGPWPGHVSRVD*KMSGSS
Trigger: AGATGACCCGCTCATCTTCAAGTCCACCCTGGACAC...GTGCCCTGGCCAGGGACCAGCGCCCTTGCACATGGGCATGGTTGAATCTGAAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR CAA 90 bp CACAGAAGGAGGGTTTCAGATTCAACCATGCCCATGTGCAAGGGCGCTGGTCCCCCACAGGGTGAAGGCTaGGAGGAGTGGCGTCTTCAG +
Preference number: 5 (lower is better)
Translates to: HRRRVSDSTMPMCKGAGPPQGEG*EEWRLQ
Trigger: CTGAAGACGCCACTCCTCCAAGCCTTCACCCTGTGG...GGGACCAGCGCCCTTGCACATGGGCATGGTTGAATCTGAAACCCTCCTTCTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS GCA 90 bp GGGATGGTCTCATCTCCAGCCAGGTCAATGGCTACCACGGTCTGCTaGTGGTACTTCTTACACAGCTCCACCACCTTGGGGGACCAGTTG +
Preference number: 5 (lower is better)
Translates to: GMVSSPARSMATTVC*WYFLHSSTTLGDQL
Trigger: CAACTGGTCCCCCAAGGTGGTGGAGCTGTGTAAGAAGTACCAGCAGCAGACCGTGGTAGCCATTGACCTGGCTGGAGATGAGACCATCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000372874.9
ENST00000464097.5
ENST00000492931.5
ENST00000536532.5
ENST00000537820.1
CDS GCA 90 bp TCTTCACAGCCTCCTGGTAGGCCTGGACATGTCCAGGCAAGAGGCTaGTTCCTGGGATGGTCTCATCTCCAGCCAGGTCAATGGCTACCA +
Preference number: 5 (lower is better)
Translates to: SSQPPGRPGHVQARG*FLGWSHLQPGQWLP
Trigger: TGGTAGCCATTGACCTGGCTGGAGATGAGACCATCCCAGGAAGCAGCCTCTTGCCTGGACATGTCCAGGCCTACCAGGAGGCTGTGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372874.9
ENST00000464097.5
ENST00000492931.5
ENST00000536532.5
CDS CCA 90 bp GCCCGCGATAGCAGGCATGTAGTAGTCAAACTTGGCCAGGAAGTCTaGAAGGGTGAGCGGCTTGTCCATGCCAATGACGTTCAGCAGCCC +
Preference number: 5 (lower is better)
Translates to: ARDSRHVVVKLGQEV*KGERLVHANDVQQP
Trigger: GGGCTGCTGAACGTCATTGGCATGGACAAGCCGCTCACCCTTCCAGACTTCCTGGCCAAGTTTGACTACTACATGCCTGCTATCGCGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000372874.9
ENST00000492931.5
ENST00000536076.1
ENST00000536532.5
ENST00000537820.1
ENST00000545776.5
CDS-3UTR CAA 90 bp ACAGAAGGAGGGTTTCAGATTCAACCATGCCCATGTGCAAGGGCGCTGGTCCCTAGTTCCACTTTGGGCTaGTCGAAGGCGGGCGTCTGG +
Preference number: 5 (lower is better)
Translates to: TEGGFQIQPCPCARALVPSSTLG*SKAGVW
Trigger: CCAGACGCCCGCCTTCGACAAGCCCAAAGTGGAACT...AGGGACCAGCGCCCTTGCACATGGGCATGGTTGAATCTGAAACCCTCCTTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR CAA 90 bp AGATTCAACCATGCCCATGTGCAAGGGCGCTGGTCCCTGGCCAGGGCACATAATGGAAGGGTGAGCGGCTaGTCCATGCCAATGACGTTC +
Preference number: 5 (lower is better)
Translates to: RFNHAHVQGRWSLARAHNGRVSG*SMPMTF
Trigger: GAACGTCATTGGCATGGACAAGCCGCTCACCCTTCC...ATTATGTGCCCTGGCCAGGGACCAGCGCCCTTGCACATGGGCATGGTTGAATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR CAA 90 bp GGGTTTCAGATTCAACCATGCCCATGTGCAAGGGCGCTGGTCCCTGGCCAGGGCGGGAGGAAACTAGATTaGGCCGCATTGATGTTCAGC +
Preference number: 5 (lower is better)
Translates to: GFQIQPCPCARALVPGQGGRKLD*AALMFS
Trigger: GCTGAACATCAATGCGGCCAAATCTAGTTTCCTCCC...GCCCTGGCCAGGGACCAGCGCCCTTGCACATGGGCATGGTTGAATCTGAAACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS CCA 90 bp GCAAGAGGCTGCTTCCTGGGATGGTCTCATCTCCAGCCAGGTCAATaGCTACCACGGTCTGCTGCTGGTACTTCTTACACAGCTCCACCA +
Preference number: 5 (lower is better)
Translates to: ARGCFLGWSHLQPGQ*LPRSAAGTSYTAPP
Trigger: TGGTGGAGCTGTGTAAGAAGTACCAGCAGCAGACCGTGGTAGCCATTGACCTGGCTGGAGATGAGACCATCCCAGGAAGCAGCCTCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372874.9
ENST00000464097.5
ENST00000492931.5
ENST00000536532.5
ENST00000537820.1
CDS CCA 90 bp CCTCGCGATAGCAGGCATGTAGTAGTCAAACTTGGCCAGGAAGTCTaGAAGGGTGAGCGGCTTGTCCATGCCAATGACGTTCAGCAGCCC +
Preference number: 5 (lower is better)
Translates to: PRDSRHVVVKLGQEV*KGERLVHANDVQQP
Trigger: GGGCTGCTGAACGTCATTGGCATGGACAAGCCGCTCACCCTTCCAGACTTCCTGGCCAAGTTTGACTACTACATGCCTGCTATCGCGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539235.5
CDS-3UTR CAA 90 bp CATGTGCAAGGGCGCTGGTCCCTGGCCAGGGCACATAATCAGAGAAGTGACGCGGGGAGGAAACTAGATTaGGCCGCATTGATGTTCAGC +
Preference number: 5 (lower is better)
Translates to: HVQGRWSLARAHNQRSDAGRKLD*AALMFS
Trigger: GCTGAACATCAATGCGGCCAAATCTAGTTTCCTCCC...CGCGTCACTTCTCTGATTATGTGCCCTGGCCAGGGACCAGCGCCCTTGCACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR CAA 90 bp TGGTCCCTGGCCAGGGCACATAATCAGAGAAGTGACGCGGCCATGCCGAGGTATAAGATGGTTTCAGGCTaGATGGATCCGTCTAGGTGG +
Preference number: 5 (lower is better)
Translates to: WSLARAHNQRSDAAMPRYKMVSG*MDPSRW
Trigger: CCACCTAGACGGATCCATCAAGCCTGAAACCATCTT...ATACCTCGGCATGGCCGCGTCACTTCTCTGATTATGTGCCCTGGCCAGGGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR CAA 90 bp GCCGCATTGATGTTCAGCCTTTTAAACTCCTCTTCAGTAAAGCCCATGTCCCGTCACAGCTCCACCACCTaGGGGGACCAGTTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: AALMFSLLNSSSVKPMSRHSSTT*GDQLGW
Trigger: CCAGCCCAACTGGTCCCCCAAGGTGGTGGAGCTGTG...ACGGGACATGGGCTTTACTGAAGAGGAGTTTAAAAGGCTGAACATCAATGCGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536532.5
CDS-3UTR CAA 90 bp GTAGCCGTGTCCCAGCCGCTCTGTCTTGAGTATGTCCACAGCCTCTTTTACTACCCCAGCCGCTCTGTCTaGAGTATGTCCACAGCCTCT +
Preference number: 5 (lower is better)
Translates to: VAVSQPLCLEYVHSLFYYPSRSV*SMSTAS
Trigger: AGAGGCTGTGGACATACTCAAGACAGAGCGGCTGGG...GTAGTAAAAGAGGCTGTGGACATACTCAAGACAGAGCGGCTGGGACACGGCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539235.5
CDS-3UTR CAA 90 bp CTCTTCAGTAAAGCCCATGTCCCGTTTGGTCATCTGGTAATCAGTGTCCAGGGTGGGATTGGCTCCACTTaGGAGTTGGCCAGCAGGTGC +
Preference number: 5 (lower is better)
Translates to: LFSKAHVPFGHLVISVQGGIGST*ELASRC
Trigger: GCACCTGCTGGCCAACTCCAAAGTGGAGCCAATCCC...ACCCTGGACACTGATTACCAGATGACCAAACGGGACATGGGCTTTACTGAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536532.5
CDS-3UTR CAA 90 bp GCATGCCACCAGCCATGGGCTTCTTTATTGAGCACCAGATTTTCAGTACAAGTTAGGATGGACCGGGCCTaGACCCCGAAGTCTCGCTCC +
Preference number: 5 (lower is better)
Translates to: ACHQPWASLLSTRFSVQVRMDRA*TPKSRS
Trigger: GGAGCGAGACTTCGGGGTCAAGGCCCGGTCCATCCT...AACTTGTACTGAAAATCTGGTGCTCAATAAAGAAGCCCATGGCTGGTGGCATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372874.9
CDS-3UTR CAA 90 bp GTTCAGCCTTTTAAACTCCTCTTCAGTAAAGCCCATGTCCCGTTTGGTCATCTGAGGATGGACCGGGCCTaGACCCCGAAGTCTCGCTCC +
Preference number: 5 (lower is better)
Translates to: VQPFKLLFSKAHVPFGHLRMDRA*TPKSRS
Trigger: GGAGCGAGACTTCGGGGTCAAGGCCCGGTCCATCCT...CAGATGACCAAACGGGACATGGGCTTTACTGAAGAGGAGTTTAAAAGGCTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536532.5
CDS-3UTR CAA 90 bp TTTCAGTACAAGTTGCCACAGAAGGAGGGTTTCAGATTCAACCATGCCCATGTGACCTTGGGGGACCAGTaGGGCTGGTGGCGCATGCAG +
Preference number: 5 (lower is better)
Translates to: FQYKLPQKEGFRFNHAHVTLGDQ*GWWRMQ
Trigger: CTGCATGCGCCACCAGCCCAACTGGTCCCCCAAGGT...CACATGGGCATGGTTGAATCTGAAACCCTCCTTCTGTGGCAACTTGTACTGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372874.9
CDS-3UTR CAA 90 bp TTTCAGTACAAGTTGCCACAGAAGGAGGGTTTCAGATTCAACCATGCCCATGTGCACAGCTCCACCACCTaGGGGGACCAGTTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: FQYKLPQKEGFRFNHAHVHSSTT*GDQLGW
Trigger: CCAGCCCAACTGGTCCCCCAAGGTGGTGGAGCTGTG...CACATGGGCATGGTTGAATCTGAAACCCTCCTTCTGTGGCAACTTGTACTGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372874.9
CDS-3UTR CAA 90 bp GTTTCAGATTCAACCATGCCCATGTGCAAGGGCGCTGGTCCCTGGCCAGGGCACGATTTTCAGTACAAGTaGCCACAGAAGGAGGGTTTC +
Preference number: 5 (lower is better)
Translates to: VSDSTMPMCKGAGPWPGHDFQYK*PQKEGF
Trigger: GAAACCCTCCTTCTGTGGCAACTTGTACTGAAAATC...GTGCCCTGGCCAGGGACCAGCGCCCTTGCACATGGGCATGGTTGAATCTGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372874.9
CDS-3UTR CAA 90 bp GTTTCAGATTCAACCATGCCCATGTGCAAGGGCGCTGGTCCCTGGCCAGGGCACTTAGCCTGGTCATTTTaGAGCCTCGAAGTGCATGTT +
Preference number: 5 (lower is better)
Translates to: VSDSTMPMCKGAGPWPGHLAWSF*SLEVHV
Trigger: AACATGCACTTCGAGGCTCAAAAATGACCAGGCTAA...GTGCCCTGGCCAGGGACCAGCGCCCTTGCACATGGGCATGGTTGAATCTGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536532.5
CDS-3UTR CAA 90 bp TTGCCACAGAAGGAGGGTTTCAGATTCAACCATGCCCATGTGCAAGGGCGCTGGTACACCACGCCCTCTTaGGCCTTCATCTCTACAAAC +
Preference number: 5 (lower is better)
Translates to: LPQKEGFRFNHAHVQGRWYTTPS*AFISTN
Trigger: GTTTGTAGAGATGAAGGCCAAAGAGGGCGTGGTGTA...CCAGCGCCCTTGCACATGGGCATGGTTGAATCTGAAACCCTCCTTCTGTGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372874.9
CDS-3UTR CAA 90 bp ACAGAAGGAGGGTTTCAGATTCAACCATGCCCATGTGCAAGGGCGCTGGTCCCTTACACCACGCCCTCTTaGGCCTTCATCTCTACAAAC +
Preference number: 5 (lower is better)
Translates to: TEGGFQIQPCPCARALVPYTTPS*AFISTN
Trigger: GTTTGTAGAGATGAAGGCCAAAGAGGGCGTGGTGTA...AGGGACCAGCGCCCTTGCACATGGGCATGGTTGAATCTGAAACCCTCCTTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS-3UTR CAA 90 bp GCATGCCACCAGCCATGGGCTTCTTTATTGAGCACCAGATTTTCAGTACAAGTTGGCTCCACTTTGGAGTaGGCCAGCAGGTGCGGACTG +
Preference number: 5 (lower is better)
Translates to: ACHQPWASLLSTRFSVQVGSTLE*ASRCGL
Trigger: CAGTCCGCACCTGCTGGCCAACTCCAAAGTGGAGCC...AACTTGTACTGAAAATCTGGTGCTCAATAAAGAAGCCCATGGCTGGTGGCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372874.9
CDS-3UTR CAA 90 bp GTCATTTTTGAGCCGAATGACTGCATGCTCCGTGTCCGGCTTCCAGGCACCAGTTTAGCCTGGTCATTTTaGAGCCGAATGACTGCATGC +
Preference number: 5 (lower is better)
Translates to: VIFEPNDCMLRVRLPGTSLAWSF*SRMTAC
Trigger: GCATGCAGTCATTCGGCTCAAAAATGACCAGGCTAA...ACTGGTGCCTGGAAGCCGGACACGGAGCATGCAGTCATTCGGCTCAAAAATGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539235.5
CDS-3UTR CAA 90 bp GCATGCCACCAGCCATGGGCTTCTTTATTGAGCACCAGATTTTCAGTACAAGTTCCACAGGGTGAAGGCTaGGAGGAGTGGCGTCTTCAG +
Preference number: 5 (lower is better)
Translates to: ACHQPWASLLSTRFSVQVPQGEG*EEWRLQ
Trigger: CTGAAGACGCCACTCCTCCAAGCCTTCACCCTGTGG...AACTTGTACTGAAAATCTGGTGCTCAATAAAGAAGCCCATGGCTGGTGGCATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372874.9
CDS-3UTR CAA 90 bp GGTTTCAGATTCAACCATGCCCATGTGCAAGGGCGCTGGTCCCTGGCCAGGGCAATAAATGTAAAAATGTaGCTCAGCCCCACAGAGTTG +
Preference number: 5 (lower is better)
Translates to: GFRFNHAHVQGRWSLARAINVKM*LSPTEL
Trigger: CAACTCTGTGGGGCTGAGCAACATTTTTACATTTAT...TGCCCTGGCCAGGGACCAGCGCCCTTGCACATGGGCATGGTTGAATCTGAAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS TCA 90 bp CTTCTGTATGGACTTACCTGCCATAGTATAAGATGGTTTCAGGCTTaGTGGATCCGTCTAGGTGGACATGCAGTTCCACCTGTGGGCGCG +
Preference number: 5 (lower is better)
Translates to: LLYGLTCHSIRWFQA*WIRLGGHAVPPVGA
Trigger: CGCGCCCACAGGTGGAACTGCATGTCCACCTAGACGGATCCATCAAGCCTGAAACCATCTTATACTATGGCAGGTAAGTCCATACAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535573.1
CDS-3UTR CAA 90 bp CTGGTAATCAGTGTCCAGGGTGGACTTGAAGATGAGCGGGTCATCTGTGTTGAGGGGAGGAAACTAGATTaGGCCGCATTGATGTTCAGC +
Preference number: 5 (lower is better)
Translates to: LVISVQGGLEDERVICVEGRKLD*AALMFS
Trigger: GCTGAACATCAATGCGGCCAAATCTAGTTTCCTCCC...CTCAACACAGATGACCCGCTCATCTTCAAGTCCACCCTGGACACTGATTACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536532.5
ENST00000539235.5
CDS-3UTR CAA 90 bp AGATTCAACCATGCCCATGTGCAAGGGCGCTGGTCCCTGGCCAGGGCACATAATATAAATGTAAAAATGTaGCTCAGCCCCACAGAGTTG +
Preference number: 5 (lower is better)
Translates to: RFNHAHVQGRWSLARAHNINVKM*LSPTEL
Trigger: CAACTCTGTGGGGCTGAGCAACATTTTTACATTTAT...ATTATGTGCCCTGGCCAGGGACCAGCGCCCTTGCACATGGGCATGGTTGAATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS CCA 90 bp TGGACCTGTAGATACCATACTCCCAAACCCGAGTCAAGGCCAGTATaGCTCACACCCACTCACCAGCCTTTTAAACTCCTCTTCAGTAAA +
Preference number: 5 (lower is better)
Translates to: WTCRYHTPKPESRPV*LTPTHQPFKLLFSK
Trigger: TTTACTGAAGAGGAGTTTAAAAGGCTGGTGAGTGGGTGTGAGCCATACTGGCCTTGACTCGGGTTTGGGAGTATGGTATCTACAGGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464097.5
CDS-3UTR CAA 90 bp GCCGCATTGATGTTCAGCCTTTTAAACTCCTCTTCAGTAAAGCCCATGTCCCGTAAGATGGTTTCAGGCTaGATGGATCCGTCTAGGTGG +
Preference number: 5 (lower is better)
Translates to: AALMFSLLNSSSVKPMSRKMVSG*MDPSRW
Trigger: CCACCTAGACGGATCCATCAAGCCTGAAACCATCTT...ACGGGACATGGGCTTTACTGAAGAGGAGTTTAAAAGGCTGAACATCAATGCGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536532.5
ENST00000539235.5
CDS CCA 90 bp GAGGAAACTAGATTTGGCCGCATTGATGTTCTGGAAAGGCCAGAATaGCAGACAACATGGAACCAGAGAACAAAGAAGGCAGCTCTTAGC +
Preference number: 5 (lower is better)
Translates to: EETRFGRIDVLERPE*QTTWNQRTKKAALS
Trigger: GCTAAGAGCTGCCTTCTTTGTTCTCTGGTTCCATGTTGTCTGCCATTCTGGCCTTTCCAGAACATCAATGCGGCCAAATCTAGTTTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464097.5
CDS-3UTR CAA 90 bp TTCAGTACAAGTTGCCACAGAAGGAGGGTTTCAGATTCAACCATGCCCATGTGCTTAGCCTGGTCATTTTaGAGCCGAATGACTGCATGC +
Preference number: 5 (lower is better)
Translates to: FSTSCHRRRVSDSTMPMCLAWSF*SRMTAC
Trigger: GCATGCAGTCATTCGGCTCAAAAATGACCAGGCTAA...GCACATGGGCATGGTTGAATCTGAAACCCTCCTTCTGTGGCAACTTGTACTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372874.9
CDS CCA 90 bp ATAGGCTTTATAGAGCAGGTCGAGAAGCTCCCTCTTTTCATCTTCTaGGAGGAAACTAGATTTGGCCGCATTGATGTTCTGGAAAGGCCA +
Preference number: 5 (lower is better)
Translates to: IGFIEQVEKLPLFIF*EETRFGRIDVLERP
Trigger: TGGCCTTTCCAGAACATCAATGCGGCCAAATCTAGTTTCCTCCCAGAAGATGAAAAGAGGGAGCTTCTCGACCTGCTCTATAAAGCCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464097.5
CDS-3UTR CAA 90 bp CTCTTCAGTAAAGCCCATGTCCCGTTTGGTCATCTGGTAATCAGTGTCCAGGGTCTAGATTTGGCCGCATaGATGTTCAGCCTTTTAAAC +
Preference number: 5 (lower is better)
Translates to: LFSKAHVPFGHLVISVQGLDLAA*MFSLLN
Trigger: GTTTAAAAGGCTGAACATCAATGCGGCCAAATCTAG...ACCCTGGACACTGATTACCAGATGACCAAACGGGACATGGGCTTTACTGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536532.5
ENST00000539235.5
CDS-3UTR CAA 90 bp GTACAAGTTGCCACAGAAGGAGGGTTTCAGATTCAACCATGCCCATGTGCAAGGCCATGGGCTTCTTTATaGAGCACCAGATTTTCAGTA +
Preference number: 5 (lower is better)
Translates to: VQVATEGGFQIQPCPCARPWASL*STRFSV
Trigger: TACTGAAAATCTGGTGCTCAATAAAGAAGCCCATGG...CCTTGCACATGGGCATGGTTGAATCTGAAACCCTCCTTCTGTGGCAACTTGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372874.9
CDS-3UTR CAA 90 bp CGAGGTATACGTGTGTGCAGAAATGGACACATAGGGTTCAGGAGCATCAGTAACCTAGATTTGGCCGCATaGATGTTCAGCCTTTTAAAC +
Preference number: 5 (lower is better)
Translates to: RGIRVCRNGHIGFRSISNLDLAA*MFSLLN
Trigger: GTTTAAAAGGCTGAACATCAATGCGGCCAAATCTAG...GTTACTGATGCTCCTGAACCCTATGTGTCCATTTCTGCACACACGTATACCTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372874.9
ENST00000536532.5
CDS GCA 72 bp CTTTGGGCTTGTCGAAGGCGGGCGTCTGGGCCATGGTaGCCTCGTGCGCCCCGGCGCTGCTCCCTCCGCCGC +
Preference number: 6 (lower is better)
Translates to: LWACRRRASGPW*PRAPRRCSLRR
Trigger: GCGGCGGAGGGAGCAGCGCCGGGGCGCACGAGGGCACCATGGCCCAGACGCCCGCCTTCGACAAGCCCAAAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000372874.9
ENST00000492931.5
ENST00000536532.5
ENST00000537820.1
ENST00000539235.5
ENST00000545776.5
CDS CCA 72 bp CCACTTTGGGCTTGTCGAAGGCGGGCGTCTGGGCCATaGTGCCCTCGTGCGCCCCGGCGCTGCTCCCTCCGC +
Preference number: 6 (lower is better)
Translates to: PLWACRRRASGP*CPRAPRRCSLR
Trigger: GCGGAGGGAGCAGCGCCGGGGCGCACGAGGGCACCATGGCCCAGACGCCCGCCTTCGACAAGCCCAAAGTGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000372874.9
ENST00000492931.5
ENST00000536532.5
ENST00000537820.1
ENST00000539235.5
ENST00000545776.5
CDS GCA 72 bp GACCGGGCCTTGACCCCGAAGTCTCGCTCCCCCTCCTaGAGGCCCTGGCCCACTAGGGCCACCACCTCGTCT +
Preference number: 6 (lower is better)
Translates to: DRALTPKSRSPS*RPWPTRATTSS
Trigger: AGACGAGGTGGTGGCCCTAGTGGGCCAGGGCCTGCAGGAGGGGGAGCGAGACTTCGGGGTCAAGGCCCGGTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000372874.9
ENST00000464097.5
ENST00000492931.5
ENST00000536532.5
ENST00000537820.1
CDS CAA 72 bp GGCTGGTGGCGCATGCAGCACAGGATGGACCGGGCCTaGACCCCGAAGTCTCGCTCCCCCTCCTGCAGGCCC +
Preference number: 6 (lower is better)
Translates to: GWWRMQHRMDRA*TPKSRSPSCRP
Trigger: GGGCCTGCAGGAGGGGGAGCGAGACTTCGGGGTCAAGGCCCGGTCCATCCTGTGCTGCATGCGCCACCAGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000372874.9
ENST00000464097.5
ENST00000492931.5
ENST00000536532.5
ENST00000537820.1
CDS CAA 90 bp GACCAGTTGGGCTGGTGGCGCATGCAGCACAGGATGGACCGGGCCTaGACCCCGAAGTCTCGCTCCCCCTCCTGCAGGCCCTGGCCCACT +
Preference number: 6 (lower is better)
Translates to: DQLGWWRMQHRMDRA*TPKSRSPSCRPWPT
Trigger: AGTGGGCCAGGGCCTGCAGGAGGGGGAGCGAGACTTCGGGGTCAAGGCCCGGTCCATCCTGTGCTGCATGCGCCACCAGCCCAACTGGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000372874.9
ENST00000464097.5
ENST00000492931.5
ENST00000536532.5
ENST00000537820.1
CDS TCA 72 bp GCTGGTGGCGCATGCAGCACAGGATGGACCGGGCCTTaGCCCCGAAGTCTCGCTCCCCCTCCTGCAGGCCCT +
Preference number: 6 (lower is better)
Translates to: AGGACSTGWTGP*PRSLAPPPAGP
Trigger: AGGGCCTGCAGGAGGGGGAGCGAGACTTCGGGGTCAAGGCCCGGTCCATCCTGTGCTGCATGCGCCACCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000372874.9
ENST00000464097.5
ENST00000492931.5
ENST00000536532.5
ENST00000537820.1
CDS GCA 72 bp CGGGGACCCCGGGAGCATCGCAAGCCTCGAGCGGCGTaGCTTCCACCGGATAGACGGACGCTCGTCGCAGAA +
Preference number: 6 (lower is better)
Translates to: RGPREHRKPRAA*LPPDRRTLVAE
Trigger: TTCTGCGACGAGCGTCCGTCTATCCGGTGGAAGGCACGCCGCTCGAGGCTTGCGATGCTCCCGGGGTCCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535573.1
ENST00000536076.1
CDS CCA 72 bp TGCAGTTCCACTTTGGGCTTGTCGAAGGCGGGCGTCTaGGCCATGGTGCCCTCGTGCGCCCCGGCGCTGCTC +
Preference number: 6 (lower is better)
Translates to: CSSTLGLSKAGV*AMVPSCAPALL
Trigger: GAGCAGCGCCGGGGCGCACGAGGGCACCATGGCCCAGACGCCCGCCTTCGACAAGCCCAAAGTGGAACTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000372874.9
ENST00000492931.5
ENST00000536532.5
ENST00000537820.1
ENST00000539235.5
ENST00000545776.5
CDS GCA 72 bp CCGAGCCCACCTCCCCGGCGTGGACAGTACGGTGAATaGCGCTCTTCACAGCCTCCTGGTAGGCCTGGACAT +
Preference number: 6 (lower is better)
Translates to: PSPPPRRGQYGE*RSSQPPGRPGH
Trigger: ATGTCCAGGCCTACCAGGAGGCTGTGAAGAGCGGCATTCACCGTACTGTCCACGCCGGGGAGGTGGGCTCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372874.9
ENST00000464097.5
ENST00000492931.5
ENST00000536532.5
CDS CCA 72 bp GCTCCTCCAGCAACTTTCAAGCGTCCCCCTGCAGTCTaGGCGCTGCTGTGCGCCAGGCCCAAGCTAGAAGCG +
Preference number: 6 (lower is better)
Translates to: APPATFKRPPAV*ALLCARPKLEA
Trigger: CGCTTCTAGCTTGGGCCTGGCGCACAGCAGCGCCCAGACTGCAGGGGGACGCTTGAAAGTTGCTGGAGGAGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535573.1
ENST00000536076.1
CDS GCA 72 bp CCGAGCCCACCTCCCCGGCGTGGACAGTACGGTGAATaGCGCTCTTCACAGCCTCGCGATAGCAGGCATGTA +
Preference number: 6 (lower is better)
Translates to: PSPPPRRGQYGE*RSSQPRDSRHV
Trigger: TACATGCCTGCTATCGCGAGGCTGTGAAGAGCGGCATTCACCGTACTGTCCACGCCGGGGAGGTGGGCTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539235.5
CDS CAA 90 bp TGGCCCCTTCCAGGCCCATCACTCACTCAGCCTGGTTCCAGGGGATaGGCTCCACTTTGGAGTTGGCCAGCAGGTGCGGACTGTACCGCA +
Preference number: 6 (lower is better)
Translates to: WPLPGPSLTQPGSRG*APLWSWPAGADCTA
Trigger: TGCGGTACAGTCCGCACCTGCTGGCCAACTCCAAAGTGGAGCCAATCCCCTGGAACCAGGCTGAGTGAGTGATGGGCCTGGAAGGGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545776.5
CDS CCA 72 bp CCCCTTCAGCCTGGTTCCAGGGGATTGGCTCCACTTTaGAGTTGGCCAGCAGGTGCGGACTGTACCGCACCT +
Preference number: 6 (lower is better)
Translates to: PLQPGSRGLAPL*SWPAGADCTAP
Trigger: AGGTGCGGTACAGTCCGCACCTGCTGGCCAACTCCAAAGTGGAGCCAATCCCCTGGAACCAGGCTGAAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372874.9
ENST00000492931.5
ENST00000536532.5
ENST00000537820.1
CDS CAA 72 bp TCCCCTTCAGCCTGGTTCCAGGGGATTGGCTCCACTTaGGAGTTGGCCAGCAGGTGCGGACTGTACCGCACC +
Preference number: 6 (lower is better)
Translates to: SPSAWFQGIGST*ELASRCGLYRT
Trigger: GGTGCGGTACAGTCCGCACCTGCTGGCCAACTCCAAAGTGGAGCCAATCCCCTGGAACCAGGCTGAAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372874.9
ENST00000492931.5
ENST00000536532.5
ENST00000537820.1
CDS CAA 90 bp AGGTCCCCTTCAGCCTGGTTCCAGGGGATTGGCTCCACTTTGGAGTaGGCCAGCAGGTGCGGACTGTACCGCACCTCCACATACACCACG +
Preference number: 6 (lower is better)
Translates to: RSPSAWFQGIGSTLE*ASRCGLYRTSTYTT
Trigger: CGTGGTGTATGTGGAGGTGCGGTACAGTCCGCACCTGCTGGCCAACTCCAAAGTGGAGCCAATCCCCTGGAACCAGGCTGAAGGGGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372874.9
ENST00000492931.5
ENST00000536532.5
ENST00000537820.1
CDS TCA 72 bp CCAGGGTGTGGTAGCCGTGTCCCAGCCGCTCTGTCTTaGGTATGTCCACAGCCTGGTAGGCCTGGACATGTC +
Preference number: 6 (lower is better)
Translates to: PGCGSRVPAALS*VCPQPGRPGHV
Trigger: GACATGTCCAGGCCTACCAGGCTGTGGACATACTCAAGACAGAGCGGCTGGGACACGGCTACCACACCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537820.1
CDS GCA 72 bp CGGCTTGTCCATGCCAATGACGTTCAGCAGCCCCTCTaGTGTGTTAGCTGGGAGGGCGATCCCTCTCCTCCT +
Preference number: 6 (lower is better)
Translates to: RLVHANDVQQPL*CVSWEGDPSPP
Trigger: AGGAGGAGAGGGATCGCCCTCCCAGCTAACACAGCAGAGGGGCTGCTGAACGTCATTGGCATGGACAAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000372874.9
ENST00000492931.5
ENST00000536076.1
ENST00000536532.5
ENST00000537820.1
ENST00000539235.5
ENST00000545776.5
CDS CCA 72 bp CTCACTCAGCCTGGTTCCAGGGGATTGGCTCCACTTTaGAGTTGGCCAGCAGGTGCGGACTGTACCGCACCT +
Preference number: 6 (lower is better)
Translates to: LTQPGSRGLAPL*SWPAGADCTAP
Trigger: AGGTGCGGTACAGTCCGCACCTGCTGGCCAACTCCAAAGTGGAGCCAATCCCCTGGAACCAGGCTGAGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545776.5
CDS CAA 72 bp ACTCACTCAGCCTGGTTCCAGGGGATTGGCTCCACTTaGGAGTTGGCCAGCAGGTGCGGACTGTACCGCACC +
Preference number: 6 (lower is better)
Translates to: THSAWFQGIGST*ELASRCGLYRT
Trigger: GGTGCGGTACAGTCCGCACCTGCTGGCCAACTCCAAAGTGGAGCCAATCCCCTGGAACCAGGCTGAGTGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545776.5
CDS CAA 90 bp AGGCCCATCACTCACTCAGCCTGGTTCCAGGGGATTGGCTCCACTTaGGAGTTGGCCAGCAGGTGCGGACTGTACCGCACCTCCACATAC +
Preference number: 6 (lower is better)
Translates to: RPITHSAWFQGIGST*ELASRCGLYRTSTY
Trigger: GTATGTGGAGGTGCGGTACAGTCCGCACCTGCTGGCCAACTCCAAAGTGGAGCCAATCCCCTGGAACCAGGCTGAGTGAGTGATGGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545776.5
CDS GCA 72 bp CCTCCTGGTAGGCCTGGACATGTCCAGGCAAGAGGCTaGTTCCTGGGATGGTCTCATCTCCAGCCAGGTCAA +
Preference number: 6 (lower is better)
Translates to: PPGRPGHVQARG*FLGWSHLQPGQ
Trigger: TTGACCTGGCTGGAGATGAGACCATCCCAGGAAGCAGCCTCTTGCCTGGACATGTCCAGGCCTACCAGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372874.9
ENST00000464097.5
ENST00000492931.5
ENST00000536532.5
CDS CAA 90 bp ATCACTCACTCAGCCTGGTTCCAGGGGATTGGCTCCACTTTGGAGTaGGCCAGCAGGTGCGGACTGTACCGCACCTCCACATACACCACG +
Preference number: 6 (lower is better)
Translates to: ITHSAWFQGIGSTLE*ASRCGLYRTSTYTT
Trigger: CGTGGTGTATGTGGAGGTGCGGTACAGTCCGCACCTGCTGGCCAACTCCAAAGTGGAGCCAATCCCCTGGAACCAGGCTGAGTGAGTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545776.5
CDS GCA 72 bp TCATCTCCAGCCAGGTCAATGGCTACCACGGTCTGCTaGTGGTACTTCTTACACAGCTCCACCACCTTGGGG +
Preference number: 6 (lower is better)
Translates to: SSPARSMATTVC*WYFLHSSTTLG
Trigger: CCCCAAGGTGGTGGAGCTGTGTAAGAAGTACCAGCAGCAGACCGTGGTAGCCATTGACCTGGCTGGAGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372874.9
ENST00000464097.5
ENST00000492931.5
ENST00000536532.5
ENST00000537820.1
CDS CAA 72 bp TCAAACTTGGCCAGGAAGTCTGGAAGGGTGAGCGGCTaGTCCATGCCAATGACGTTCAGCAGCCCCTCTGCT +
Preference number: 6 (lower is better)
Translates to: SNLARKSGRVSG*SMPMTFSSPSA
Trigger: AGCAGAGGGGCTGCTGAACGTCATTGGCATGGACAAGCCGCTCACCCTTCCAGACTTCCTGGCCAAGTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000372874.9
ENST00000492931.5
ENST00000536076.1
ENST00000536532.5
ENST00000537820.1
ENST00000539235.5
ENST00000545776.5
CDS TCA 72 bp CCAGGGTGTGGTAGCCGTGTCCCAGCCGCTCTGTCTTaGGTATGTCCACAGCCTGTAGAGAAGCAGAATAGA +
Preference number: 6 (lower is better)
Translates to: PGCGSRVPAALS*VCPQPVEKQNR
Trigger: TCTATTCTGCTTCTCTACAGGCTGTGGACATACTCAAGACAGAGCGGCTGGGACACGGCTACCACACCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464097.5
ENST00000492931.5
CDS GCA 72 bp GTCTCATCTCCAGCCAGGTCAATGGCTACCACGGTCTaGTGCTGGTACTTCTTACACAGCTCCACCACCTTG +
Preference number: 6 (lower is better)
Translates to: VSSPARSMATTV*CWYFLHSSTTL
Trigger: CAAGGTGGTGGAGCTGTGTAAGAAGTACCAGCAGCAGACCGTGGTAGCCATTGACCTGGCTGGAGATGAGAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372874.9
ENST00000464097.5
ENST00000492931.5
ENST00000536532.5
ENST00000537820.1
CDS CCA 72 bp CTCACTCCCTCTCTCCAAAGATTCCAGGCCCCGGACTaGACCTGTAGATACCATACTCCCAAACCCGAGTCA +
Preference number: 6 (lower is better)
Translates to: LTPSLQRFQAPD*TCRYHTPKPES
Trigger: TGACTCGGGTTTGGGAGTATGGTATCTACAGGTCCAGTCCGGGGCCTGGAATCTTTGGAGAGAGGGAGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464097.5
CDS CCA 72 bp TATAAGATGGTTTCAGGCTTGATGGATCCGTCTAGGTaGACATGCAGTTCCACCTGTGGGCGCGCGCTCCAG +
Preference number: 6 (lower is better)
Translates to: YKMVSGLMDPSR*TCSSTCGRALQ
Trigger: CTGGAGCGCGCGCCCACAGGTGGAACTGCATGTCCACCTAGACGGATCCATCAAGCCTGAAACCATCTTATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535573.1
ENST00000536076.1
CDS CCA 72 bp TGCTTCCTGGGATGGTCTCATCTCCAGCCAGGTCAATaGCTACCACGGTCTGCTGCTGGTACTTCTTACACA +
Preference number: 6 (lower is better)
Translates to: CFLGWSHLQPGQ*LPRSAAGTSYT
Trigger: TGTGTAAGAAGTACCAGCAGCAGACCGTGGTAGCCATTGACCTGGCTGGAGATGAGACCATCCCAGGAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372874.9
ENST00000464097.5
ENST00000492931.5
ENST00000536532.5
ENST00000537820.1
CDS CAA 90 bp TGTCTTCTCTGTGGAAAGTGTCTAGGTTGGGCTTGTCTTGGACTGTaGAGGCAGACTCACTCCCTCTCTCCAAAGATTCCAGGCCCCGGA +
Preference number: 6 (lower is better)
Translates to: CLLCGKCLGWACLGL*RQTHSLSPKIPGPG
Trigger: TCCGGGGCCTGGAATCTTTGGAGAGAGGGAGTGAGTCTGCCTCAACAGTCCAAGACAAGCCCAACCTAGACACTTTCCACAGAGAAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464097.5
CDS CCA 72 bp AGCAGGCATGTAGTAGTCAAACTTGGCCAGGAAGTCTaGAAGGGTGAGCGGCTTGTCCATGCCAATGACGTT +
Preference number: 6 (lower is better)
Translates to: SRHVVVKLGQEV*KGERLVHANDV
Trigger: AACGTCATTGGCATGGACAAGCCGCTCACCCTTCCAGACTTCCTGGCCAAGTTTGACTACTACATGCCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000372874.9
ENST00000492931.5
ENST00000536076.1
ENST00000536532.5
ENST00000537820.1
ENST00000539235.5
ENST00000545776.5
CDS GCA 72 bp GGGGGAAGGATTTGTCCACTGTCACACGGCAGCAAGTaGCAGAGTAGAGACCATGAGGTCGTGTTCTTAATT +
Preference number: 6 (lower is better)
Translates to: GGRICPLSHGSK*QSRDHEVVFLI
Trigger: AATTAAGAACACGACCTCATGGTCTCTACTCTGGCACTTGCTGCCGTGTGACAGTGGACAAATCCTTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464097.5
CDS CCA 72 bp AGATACCATACTCCCAAACCCGAGTCAAGGCCAGTATaGCTCACACCCACTCACCAGCCTTTTAAACTCCTC +
Preference number: 6 (lower is better)
Translates to: RYHTPKPESRPV*LTPTHQPFKLL
Trigger: GAGGAGTTTAAAAGGCTGGTGAGTGGGTGTGAGCCATACTGGCCTTGACTCGGGTTTGGGAGTATGGTATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464097.5
CDS CCA 72 bp TATAAGATGGTTTCAGGCTTGATGGATCCGTCTAGGTaGACATGCAGTTCCACTTTGGGCTTGTCGAAGGCG +
Preference number: 6 (lower is better)
Translates to: YKMVSGLMDPSR*TCSSTLGLSKA
Trigger: CGCCTTCGACAAGCCCAAAGTGGAACTGCATGTCCACCTAGACGGATCCATCAAGCCTGAAACCATCTTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000372874.9
ENST00000492931.5
ENST00000536532.5
ENST00000537820.1
ENST00000539235.5
ENST00000545776.5
CDS CAA 72 bp AAGATGTCTTCTCTGTGGAAAGTGTCTAGGTTGGGCTaGTCTTGGACTGTTGAGGCAGACTCACTCCCTCTC +
Preference number: 6 (lower is better)
Translates to: KMSSLWKVSRLG*SWTVEADSLPL
Trigger: GAGAGGGAGTGAGTCTGCCTCAACAGTCCAAGACAAGCCCAACCTAGACACTTTCCACAGAGAAGACATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464097.5
CDS TCA 72 bp GGACTTACCTGCCATAGTATAAGATGGTTTCAGGCTTaGTGGATCCGTCTAGGTGGACATGCAGTTCCACCT +
Preference number: 6 (lower is better)
Translates to: GLTCHSIRWFQA*WIRLGGHAVPP
Trigger: AGGTGGAACTGCATGTCCACCTAGACGGATCCATCAAGCCTGAAACCATCTTATACTATGGCAGGTAAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535573.1
CDS CCA 72 bp ACACAAAGATGTCTTCTCTGTGGAAAGTGTCTAGGTTaGGCTTGTCTTGGACTGTTGAGGCAGACTCACTCC +
Preference number: 6 (lower is better)
Translates to: TQRCLLCGKCLG*ACLGLLRQTHS
Trigger: GGAGTGAGTCTGCCTCAACAGTCCAAGACAAGCCCAACCTAGACACTTTCCACAGAGAAGACATCTTTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464097.5
CDS CCA 72 bp TCTGGGAGGAAACTAGATTTGGCCGCATTGATGTTCTaGAAAGGCCAGAATGGCAGACAACATGGAACCAGA +
Preference number: 6 (lower is better)
Translates to: SGRKLDLAALMF*KGQNGRQHGTR
Trigger: TCTGGTTCCATGTTGTCTGCCATTCTGGCCTTTCCAGAACATCAATGCGGCCAAATCTAGTTTCCTCCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464097.5
CDS CAA 90 bp AGCTCCCTCTTTTCATCTTCTGGGAGGAAACTAGATTTGGCCGCATaGATGTTCTGGAAAGGCCAGAATGGCAGACAACATGGAACCAGA +
Preference number: 6 (lower is better)
Translates to: SSLFSSSGRKLDLAA*MFWKGQNGRQHGTR
Trigger: TCTGGTTCCATGTTGTCTGCCATTCTGGCCTTTCCAGAACATCAATGCGGCCAAATCTAGTTTCCTCCCAGAAGATGAAAAGAGGGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464097.5
CDS CAA 90 bp AGGTCGAGAAGCTCCCTCTTTTCATCTTCTGGGAGGAAACTAGATTaGGCCGCATTGATGTTCTGGAAAGGCCAGAATGGCAGACAACAT +
Preference number: 6 (lower is better)
Translates to: RSRSSLFSSSGRKLD*AALMFWKGQNGRQH
Trigger: ATGTTGTCTGCCATTCTGGCCTTTCCAGAACATCAATGCGGCCAAATCTAGTTTCCTCCCAGAAGATGAAAAGAGGGAGCTTCTCGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464097.5
CDS CCA 72 bp CTAGGTCAGGACGTCAACACAAAGATGTCTTCTCTGTaGAAAGTGTCTAGGTTGGGCTTGTCTTGGACTGTT +
Preference number: 6 (lower is better)
Translates to: LGQDVNTKMSSL*KVSRLGLSWTV
Trigger: AACAGTCCAAGACAAGCCCAACCTAGACACTTTCCACAGAGAAGACATCTTTGTGTTGACGTCCTGACCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464097.5
CDS CCA 72 bp AGATTTGGCCGCATTGATGTTCTGGAAAGGCCAGAATaGCAGACAACATGGAACCAGAGAACAAAGAAGGCA +
Preference number: 6 (lower is better)
Translates to: RFGRIDVLERPE*QTTWNQRTKKA
Trigger: TGCCTTCTTTGTTCTCTGGTTCCATGTTGTCTGCCATTCTGGCCTTTCCAGAACATCAATGCGGCCAAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464097.5
CDS CAA 72 bp AACACAAAGATGTCTTCTCTGTGGAAAGTGTCTAGGTaGGGCTTGTCTTGGACTGTTGAGGCAGACTCACTC +
Preference number: 6 (lower is better)
Translates to: NTKMSSLWKVSR*GLSWTVEADSL
Trigger: GAGTGAGTCTGCCTCAACAGTCCAAGACAAGCCCAACCTAGACACTTTCCACAGAGAAGACATCTTTGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464097.5
CDS CAA 72 bp TTCATAGCTGCTGCACACACCTTTCTGGGGAGAGGGTaGACAGCTTTCACTGGATTCTTTAAAGGCACTCAA +
Preference number: 6 (lower is better)
Translates to: FIAAAHTFLGRG*TAFTGFFKGTQ
Trigger: TTGAGTGCCTTTAAAGAATCCAGTGAAAGCTGTCAACCCTCTCCCCAGAAAGGTGTGTGCAGCAGCTATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464097.5
CDS TCA 72 bp GAATGGACTTATTCAGCCTGGGATTTAAGAACAACCTaGAGAGAGTGTGCAAGACTTCATAGCTGCTGCACA +
Preference number: 6 (lower is better)
Translates to: EWTYSAWDLRTT*RECARLHSCCT
Trigger: TGTGCAGCAGCTATGAAGTCTTGCACACTCTCTTCAGGTTGTTCTTAAATCCCAGGCTGAATAAGTCCATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464097.5