Pregenerated sensors for ACYP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000119640Ensembl transcript IDs: ENST00000238618.8, ENST00000357971.7, ENST00000553302.1, ENST00000555135.1, ENST00000555463.1, ENST00000555694.5
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TATGACGCACCTTGGAGATGGGACCTTGCAATTGTCCTTGCACTGTaGCCCGGTCAGTGTTCTGGACCCAGCCTACCAATCCCAGCTTTT | + |
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Preference number: 1 (lower is better) Translates to: YDAPWRWDLAIVLAL*PGQCSGPSLPIPAF Trigger: AAAAGCTGGGATTGGTAGGCTGGGTCCAGAACACTGACCGGGGCACAGTGCAAGGACAATTGCAAGGTCCCATCTCCAAGGTGCGTCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357971.7 |
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| 3UTR TCA 90 bp | ATGTGTGATTTAGGACTTCCTCTTGTTTCAAGCCATTCCTGCATATaGCGCACCTTGGAGATGGGACCTTGCAATTGTCCTTGCACTGTG | + |
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Preference number: 1 (lower is better) Translates to: MCDLGLPLVSSHSCI*RTLEMGPCNCPCTV Trigger: CACAGTGCAAGGACAATTGCAAGGTCCCATCTCCAAGGTGCGTCATATGCAGGAATGGCTTGAAACAAGAGGAAGTCCTAAATCACACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357971.7 |
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| 3UTR CAA 90 bp | TTCCTGCATATGACGCACCTTGGAGATGGGACCTTGCAATTGTCCTaGCACTGTGCCCCGGTCAGTGTTCTGGACCCAGCCTACCAATCC | + |
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Preference number: 2 (lower is better) Translates to: FLHMTHLGDGTLQLS*HCAPVSVLDPAYQS Trigger: GGATTGGTAGGCTGGGTCCAGAACACTGACCGGGGCACAGTGCAAGGACAATTGCAAGGTCCCATCTCCAAGGTGCGTCATATGCAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357971.7 |
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| 3UTR CAA 90 bp | AAGCCATTCCTGCATATGACGCACCTTGGAGATGGGACCTTGCAATaGTCCTTGCACTGTGCCCCGGTCAGTGTTCTGGACCCAGCCTAC | + |
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Preference number: 2 (lower is better) Translates to: KPFLHMTHLGDGTLQ*SLHCAPVSVLDPAY Trigger: GTAGGCTGGGTCCAGAACACTGACCGGGGCACAGTGCAAGGACAATTGCAAGGTCCCATCTCCAAGGTGCGTCATATGCAGGAATGGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357971.7 |
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| 3UTR CAA 90 bp | TGTTTCAAGCCATTCCTGCATATGACGCACCTTGGAGATGGGACCTaGCAATTGTCCTTGCACTGTGCCCCGGTCAGTGTTCTGGACCCA | + |
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Preference number: 2 (lower is better) Translates to: CFKPFLHMTHLGDGT*QLSLHCAPVSVLDP Trigger: TGGGTCCAGAACACTGACCGGGGCACAGTGCAAGGACAATTGCAAGGTCCCATCTCCAAGGTGCGTCATATGCAGGAATGGCTTGAAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357971.7 |
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| 3UTR-3UTR GCA 90 bp | CTTCCATTTACACCATGTTTTACCGATTGCACAGCATTTTCATACTCATTGCTCACTACCTCTTTGCCATaGAGCTACCAAATAGCCAGC | + |
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Preference number: 2 (lower is better) Translates to: LPFTPCFTDCTAFSYSLLTTSLP*SYQIAS Trigger: GCTGGCTATTTGGTAGCTGCATGGCAAAGAGGTAGT...GAGCAATGAGTATGAAAATGCTGTGCAATCGGTAAAACATGGTGTAAATGGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000553302.1 |
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| 3UTR-3UTR CCA 90 bp | AGGTCTGAAGAAAGTGCAGCAGCTGCAGAGGAAGCATTTATATATGTTATATACATAAGAAACCTGACTTaGTTTGATGATGCCACAACG | + |
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Preference number: 2 (lower is better) Translates to: RSEESAAAAEEAFIYVIYIRNLT*FDDATT Trigger: CGTTGTGGCATCATCAAACCAAGTCAGGTTTCTTAT...GTATATAACATATATAAATGCTTCCTCTGCAGCTGCTGCACTTTCTTCAGACCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553302.1 |
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| 3UTR GCA 72 bp | CCTTGGAGATGGGACCTTGCAATTGTCCTTGCACTGTaGCCCGGTCAGTGTTCTGGACCCAGCCTACCAATC | + |
|
Preference number: 3 (lower is better) Translates to: PWRWDLAIVLAL*PGQCSGPSLPI Trigger: GATTGGTAGGCTGGGTCCAGAACACTGACCGGGGCACAGTGCAAGGACAATTGCAAGGTCCCATCTCCAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357971.7 |
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| 3UTR-3UTR CAA 90 bp | ATGCCACAACGGCGAGCACTGGGGAAGCCCTCTATTTCCCTTGGAAGAGAGAAGGCTTCTAGTTCACATTaGTCAAGAACACGTCCCTTG | + |
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Preference number: 3 (lower is better) Translates to: MPQRRALGKPSISLGREKASSSH*SRTRPL Trigger: CAAGGGACGTGTTCTTGACAAATGTGAACTAGAAGC...CTTCTCTCTTCCAAGGGAAATAGAGGGCTTCCCCAGTGCTCGCCGTTGTGGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553302.1 |
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| 3UTR-3UTR CAA 90 bp | AAGTTTGCTTTGTCGATGTGTGATTTAGGACTTCCTCTTGTTTCAAGCCATTCCGATGGGACCTTGCAATaGTCCTTGCACTGTGCCCCG | + |
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Preference number: 3 (lower is better) Translates to: KFALSMCDLGLPLVSSHSDGTLQ*SLHCAP Trigger: CGGGGCACAGTGCAAGGACAATTGCAAGGTCCCATC...GGAATGGCTTGAAACAAGAGGAAGTCCTAAATCACACATCGACAAAGCAAACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357971.7 |
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| 3UTR-3UTR CAA 90 bp | ATACTCATTGCTCTACAAACTACCTCTTTGCCATGCAGCTACCAAATAGCCAGCTCAAGAACACGTCCCTaGTTCCTATGCCCACAACCT | + |
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Preference number: 3 (lower is better) Translates to: ILIALQTTSLPCSYQIASSRTRP*FLCPQP Trigger: AGGTTGTGGGCATAGGAACAAGGGACGTGTTCTTGA...GCTGGCTATTTGGTAGCTGCATGGCAAAGAGGTAGTTTGTAGAGCAATGAGTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553302.1 |
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| 3UTR TCA 72 bp | TTAGGACTTCCTCTTGTTTCAAGCCATTCCTGCATATaGCGCACCTTGGAGATGGGACCTTGCAATTGTCCT | + |
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Preference number: 3 (lower is better) Translates to: LGLPLVSSHSCI*RTLEMGPCNCP Trigger: AGGACAATTGCAAGGTCCCATCTCCAAGGTGCGTCATATGCAGGAATGGCTTGAAACAAGAGGAAGTCCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357971.7 |
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| 3UTR-3UTR CAA 90 bp | TTGTTGAAGTTTGCTTTGTCGATGTGTGATTTAGGACTTCCTCTTGTTTCAAGCCTTGGAGATGGGACCTaGCAATTGTCCTTGCACTGT | + |
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Preference number: 3 (lower is better) Translates to: LLKFALSMCDLGLPLVSSLGDGT*QLSLHC Trigger: ACAGTGCAAGGACAATTGCAAGGTCCCATCTCCAAG...GCTTGAAACAAGAGGAAGTCCTAAATCACACATCGACAAAGCAAACTTCAACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357971.7 |
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| 3UTR-3UTR CAA 90 bp | TTGGAAGAGAGAAGCTCATTAATATGTGTATCTAGATGCTCAGGCACCACTGACGCATTTTCATACTCATaGCTCTACAAACTACCTCTT | + |
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Preference number: 3 (lower is better) Translates to: LEERSSLICVSRCSGTTDAFSYS*LYKLPL Trigger: AAGAGGTAGTTTGTAGAGCAATGAGTATGAAAATGC...GTCAGTGGTGCCTGAGCATCTAGATACACATATTAATGAGCTTCTCTCTTCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553302.1 |
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| 3UTR CAA 72 bp | ATGACGCACCTTGGAGATGGGACCTTGCAATTGTCCTaGCACTGTGCCCCGGTCAGTGTTCTGGACCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: MTHLGDGTLQLS*HCAPVSVLDPA Trigger: GGCTGGGTCCAGAACACTGACCGGGGCACAGTGCAAGGACAATTGCAAGGTCCCATCTCCAAGGTGCGTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357971.7 |
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| CDS-3UTR GCA 90 bp | TTCAAGCCATTCCTGCATATGACGCACCTTGGAGATGGGACCTTGCAATTGTCCGTCTTCCCCACCGGCTaGCAGGATCACTCCGGGACC | + |
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Preference number: 4 (lower is better) Translates to: FKPFLHMTHLGDGTLQLSVFPTG*QDHSGT Trigger: GGTCCCGGAGTGATCCTGGCAGCCGGTGGGGAAGAC...GGACAATTGCAAGGTCCCATCTCCAAGGTGCGTCATATGCAGGAATGGCTTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357971.7 |
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| 3UTR CAA 72 bp | CTGCATATGACGCACCTTGGAGATGGGACCTTGCAATaGTCCTTGCACTGTGCCCCGGTCAGTGTTCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LHMTHLGDGTLQ*SLHCAPVSVLD Trigger: GTCCAGAACACTGACCGGGGCACAGTGCAAGGACAATTGCAAGGTCCCATCTCCAAGGTGCGTCATATGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357971.7 |
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| CDS-3UTR CCA 90 bp | TTCAAGCCATTCCTGCATATGACGCACCTTGGAGATGGGACCTTGCAATTGTCCCCCCGGTCAGTGTTCTaGACCCAGCCTACCAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: FKPFLHMTHLGDGTLQLSPRSVF*TQPTNP Trigger: GGGATTGGTAGGCTGGGTCCAGAACACTGACCGGGG...GGACAATTGCAAGGTCCCATCTCCAAGGTGCGTCATATGCAGGAATGGCTTGAA 54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000357971.7 |
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| 3UTR CAA 72 bp | CCATTCCTGCATATGACGCACCTTGGAGATGGGACCTaGCAATTGTCCTTGCACTGTGCCCCGGTCAGTGTT | + |
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Preference number: 4 (lower is better) Translates to: PFLHMTHLGDGT*QLSLHCAPVSV Trigger: AACACTGACCGGGGCACAGTGCAAGGACAATTGCAAGGTCCCATCTCCAAGGTGCGTCATATGCAGGAATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357971.7 |
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| CDS-3UTR TCA 90 bp | CCATTCCTGCATATGACGCACCTTGGAGATGGGACCTTGCAATTGTCCTTGCACAGCCATTCCTGCATATaGCGCACCTTGGAGATGGGA | + |
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Preference number: 4 (lower is better) Translates to: PFLHMTHLGDGTLQLSLHSHSCI*RTLEMG Trigger: TCCCATCTCCAAGGTGCGTCATATGCAGGAATGGCT...GTGCAAGGACAATTGCAAGGTCCCATCTCCAAGGTGCGTCATATGCAGGAATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357971.7 |
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| CDS-3UTR GCA 90 bp | GCCATTCCTGCATATGACGCACCTTGGAGATGGGACCTTGCAATTGTCCTTGCAATTGTCCTTGCACTGTaGCCCGGTCAGTGTTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: AIPAYDAPWRWDLAIVLAIVLAL*PGQCSG Trigger: TCCAGAACACTGACCGGGGCACAGTGCAAGGACAAT...TGCAAGGACAATTGCAAGGTCCCATCTCCAAGGTGCGTCATATGCAGGAATGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357971.7 |
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| CDS-3UTR GCA 90 bp | GACTTCCTCTTGTTTCAAGCCATTCCTGCATATGACGCACCTTGGAGATGGGACCCTTGCAATTGTCCTTaGACTGTGCCCCGGTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: DFLLFQAIPAYDAPWRWDPCNCP*TVPRSV Trigger: CACTGACCGGGGCACAGTGCAAGGACAATTGCAAGG...GTCCCATCTCCAAGGTGCGTCATATGCAGGAATGGCTTGAAACAAGAGGAAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357971.7 |
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| CDS-3UTR CCA 90 bp | CATTGCTCTACAAACTACCTCTTTGCCATGCAGCTACCAAATAGCCAGCGGCTTCACAACGGCGAGCACTaGGGAAGCCCTCTATTTCCC | + |
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Preference number: 4 (lower is better) Translates to: HCSTNYLFAMQLPNSQRLHNGEH*GSPLFP Trigger: GGGAAATAGAGGGCTTCCCCAGTGCTCGCCGTTGTG...AAGCCGCTGGCTATTTGGTAGCTGCATGGCAAAGAGGTAGTTTGTAGAGCAATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553302.1 |
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| CDS-3UTR GCA 90 bp | TTACCGATTGCACAGCATTTTCATACTCATTGCTCTACAAACTACCTCTTTGCCGTCTTCCCCACCGGCTaGCAGGATCACTCCGGGACC | + |
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Preference number: 4 (lower is better) Translates to: LPIAQHFHTHCSTNYLFAVFPTG*QDHSGT Trigger: GGTCCCGGAGTGATCCTGGCAGCCGGTGGGGAAGAC...GGCAAAGAGGTAGTTTGTAGAGCAATGAGTATGAAAATGCTGTGCAATCGGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000553302.1 |
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| CDS-3UTR GCA 90 bp | CAGAAGGTTCTAACGTTTTTATTGATTAGATTTGTGTACAGTGGTAATCCTTCCCGGACGCCGGCATCCTaGGGCGGAAGCACGCGGAGG | + |
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Preference number: 4 (lower is better) Translates to: QKVLTFLLIRFVYSGNPSRTPAS*GGSTRR Trigger: CCTCCGCGTGCTTCCGCCGCAGGATGCCGGCGTCCG...GGAAGGATTACCACTGTACACAAATCTAATCAATAAAAACGTTAGAACCTTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000555463.1 |
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| CDS-3UTR CCA 90 bp | TTCCTGCATATGACGCACCTTGGAGATGGGACCTTGCAATTGTCCTTGCACTGTGACGCACCTTGGAGATaGGACCTTGCAATTGTCCTT | + |
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Preference number: 4 (lower is better) Translates to: FLHMTHLGDGTLQLSLHCDAPWR*DLAIVL Trigger: AAGGACAATTGCAAGGTCCCATCTCCAAGGTGCGTC...ACAGTGCAAGGACAATTGCAAGGTCCCATCTCCAAGGTGCGTCATATGCAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357971.7 |
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| CDS-3UTR GCA 90 bp | CCATTCCTGCATATGACGCACCTTGGAGATGGGACCTTGCAATTGTCCTTGCACTGTTTCCTTCTGCCATaGTCAAACCCTCCTTGTCTT | + |
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Preference number: 4 (lower is better) Translates to: PFLHMTHLGDGTLQLSLHCFLLP*SNPPCL Trigger: AAGACAAGGAGGGTTTGAGCATGGCAGAAGGAAACA...GTGCAAGGACAATTGCAAGGTCCCATCTCCAAGGTGCGTCATATGCAGGAATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357971.7 |
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| CDS-3UTR GCA 90 bp | TTCCTGCATATGACGCACCTTGGAGATGGGACCTTGCAATTGTCCTTGCACTGTTTGGAGATGGGACCTTaGAATTGTCCTTGCACTGTG | + |
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Preference number: 4 (lower is better) Translates to: FLHMTHLGDGTLQLSLHCLEMGP*NCPCTV Trigger: CACAGTGCAAGGACAATTGCAAGGTCCCATCTCCAA...ACAGTGCAAGGACAATTGCAAGGTCCCATCTCCAAGGTGCGTCATATGCAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357971.7 |
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| CDS-3UTR GCA 90 bp | TGCTCTACAAACTACCTCTTTGCCATGCAGCTACCAAATAGCCAGCGGCTTCTACGTCCCTTGTTCCTATaGCCACAACCTAGGTTACCA | + |
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Preference number: 4 (lower is better) Translates to: CSTNYLFAMQLPNSQRLLRPLFL*PQPRLP Trigger: TGGTAACCTAGGTTGTGGGCATAGGAACAAGGGACG...TAGAAGCCGCTGGCTATTTGGTAGCTGCATGGCAAAGAGGTAGTTTGTAGAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553302.1 |
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| CDS-3UTR GCA 90 bp | ATGCCACAACGGCGAGCACTGGGGAAGCCCTCTATTTCCCTTGGAAGAGAGAAGAGAAAGTGCAGCAGCTaGAGAGGAAGCATTTATATA | + |
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Preference number: 4 (lower is better) Translates to: MPQRRALGKPSISLGREKRKCSS*RGSIYI Trigger: TATATAAATGCTTCCTCTGCAGCTGCTGCACTTTCT...CTTCTCTCTTCCAAGGGAAATAGAGGGCTTCCCCAGTGCTCGCCGTTGTGGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553302.1 |
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| CDS-3UTR CCA 90 bp | GACTTCCTCTTGTTTCAAGCCATTCCTGCATATGACGCACCTTGGAGATGGGACGGTAGCAAAGCTAACTaGAACACAGCTCTTGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: DFLLFQAIPAYDAPWRWDGSKAN*NTALAV Trigger: CACAGCAAGAGCTGTGTTCCAGTTAGCTTTGCTACC...GTCCCATCTCCAAGGTGCGTCATATGCAGGAATGGCTTGAAACAAGAGGAAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357971.7 |
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| CDS-3UTR CCA 90 bp | CAGAAGGTTCTAACGTTTTTATTGATTAGATTTGTGTACAGTGGTAATCCTTCCTGCCATGCTCAAACCTaGGGCCCGCCCAGCGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: QKVLTFLLIRFVYSGNPSCHAQT*GPPSAA Trigger: GGCTGCGCTGGGCGGGCCCCAGGTTTGAGCATGGCA...GGAAGGATTACCACTGTACACAAATCTAATCAATAAAAACGTTAGAACCTTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000555463.1 |
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| CDS-3UTR TCA 90 bp | ATTGCTCTACAAACTACCTCTTTGCCATGCAGCTACCAAATAGCCAGCGGCTTCATGCTCAGGCACCACTaGCTAATAATAACAGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: IALQTTSLPCSYQIASGFMLRHH*LIITAG Trigger: CCCTGCTGTTATTATTAGTCAGTGGTGCCTGAGCAT...GAAGCCGCTGGCTATTTGGTAGCTGCATGGCAAAGAGGTAGTTTGTAGAGCAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553302.1 |
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| CDS-3UTR GCA 90 bp | CAGAAGGTTCTAACGTTTTTATTGATTAGATTTGTGTACAGTGGTAATCCTTCCAGGGCCTCCGCCCTTTaGCAGACAAGGGCACACCCC | + |
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Preference number: 4 (lower is better) Translates to: QKVLTFLLIRFVYSGNPSRASAL*QTRAHP Trigger: GGGGTGTGCCCTTGTCTGGCAAAGGGCGGAGGCCCT...GGAAGGATTACCACTGTACACAAATCTAATCAATAAAAACGTTAGAACCTTCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000555463.1 |
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| CDS-3UTR CCA 90 bp | CAGAAGGTTCTAACGTTTTTATTGATTAGATTTGTGTACAGTGGTAATCCTTCCCCCCAAGGGCAGGGCTaGACCGAGCTGCAGAGTTGG | + |
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Preference number: 4 (lower is better) Translates to: QKVLTFLLIRFVYSGNPSPQGQG*TELQSW Trigger: CCAACTCTGCAGCTCGGTCCAGCCCTGCCCTTGGGG...GGAAGGATTACCACTGTACACAAATCTAATCAATAAAAACGTTAGAACCTTCTG 48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000555463.1 |
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| CDS-3UTR TCA 90 bp | TTCAAGCCATTCCTGCATATGACGCACCTTGGAGATGGGACCTTGCAATTGTCCTGCTTTGTCGATGTGTaGTTTAGGACTTCCTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: FKPFLHMTHLGDGTLQLSCFVDV*FRTSSC Trigger: ACAAGAGGAAGTCCTAAATCACACATCGACAAAGCA...GGACAATTGCAAGGTCCCATCTCCAAGGTGCGTCATATGCAGGAATGGCTTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357971.7 |
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| CDS-3UTR TCA 90 bp | GTTAGCCTTTCTATAAGAAACCTGACTTGGTTTGATGATGCCACAACGGCGAGCTGCAGGCCACATACCTaGGTATGCTTACGGAAAAAC | + |
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Preference number: 4 (lower is better) Translates to: VSLSIRNLTWFDDATTASCRPHT*VCLRKN Trigger: GTTTTTCCGTAAGCATACTCAGGTATGTGGCCTGCA...GCTCGCCGTTGTGGCATCATCAAACCAAGTCAGGTTTCTTATAGAAAGGCTAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000553302.1 |
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| CDS-3UTR GCA 90 bp | CATTGCTCTACAAACTACCTCTTTGCCATGCAGCTACCAAATAGCCAGCGGCTTTGTTTCCTTCTGCCATaGTCAAACCCTCCTTGTCTT | + |
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Preference number: 4 (lower is better) Translates to: HCSTNYLFAMQLPNSQRLCFLLP*SNPPCL Trigger: AAGACAAGGAGGGTTTGAGCATGGCAGAAGGAAACA...AAGCCGCTGGCTATTTGGTAGCTGCATGGCAAAGAGGTAGTTTGTAGAGCAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553302.1 |
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| CDS-3UTR GCA 90 bp | GTGTATCTAGATGCTCAGGCACCACTGACTAATAATAACAGCAGGGTGATCTTCACTACCTCTTTGCCATaGAGCTACCAAATAGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: VYLDAQAPLTNNNSRVIFTTSLP*SYQIAS Trigger: GCTGGCTATTTGGTAGCTGCATGGCAAAGAGGTAGT...GAAGATCACCCTGCTGTTATTATTAGTCAGTGGTGCCTGAGCATCTAGATACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553302.1 |
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| CDS-3UTR CCA 90 bp | CAGAAGGTTCTAACGTTTTTATTGATTAGATTTGTGTACAGTGGTAATCCTTCCCCCCGGTCAGTGTTCTaGACCCAGCCTACCAATCCC | + |
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Preference number: 4 (lower is better) Translates to: QKVLTFLLIRFVYSGNPSPRSVF*TQPTNP Trigger: GGGATTGGTAGGCTGGGTCCAGAACACTGACCGGGG...GGAAGGATTACCACTGTACACAAATCTAATCAATAAAAACGTTAGAACCTTCTG 46% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000555463.1 |
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| CDS-3UTR TCA 90 bp | GACTTCCTCTTGTTTCAAGCCATTCCTGCATATGACGCACCTTGGAGATGGGACAATTTCATAATCCACTaGTATCAGGGTGTTTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: DFLLFQAIPAYDAPWRWDNFIIH*YQGVSF Trigger: GAAGGAAACACCCTGATATCAGTGGATTATGAAATT...GTCCCATCTCCAAGGTGCGTCATATGCAGGAATGGCTTGAAACAAGAGGAAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357971.7 |
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| CDS-3UTR GCA 90 bp | CAGAAGGTTCTAACGTTTTTATTGATTAGATTTGTGTACAGTGGTAATCCTTCCTGTTTCCTTCTGCCATaGTCAAACCTGGGGCCCGCC | + |
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Preference number: 4 (lower is better) Translates to: QKVLTFLLIRFVYSGNPSCFLLP*SNLGPA Trigger: GGCGGGCCCCAGGTTTGAGCATGGCAGAAGGAAACA...GGAAGGATTACCACTGTACACAAATCTAATCAATAAAAACGTTAGAACCTTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000555463.1 |
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| CDS-3UTR CCA 90 bp | ATTGCTCTACAAACTACCTCTTTGCCATGCAGCTACCAAATAGCCAGCGGCTTCATAAGAAACCTGACTTaGTTTGATGATGCCACAACG | + |
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Preference number: 4 (lower is better) Translates to: IALQTTSLPCSYQIASGFIRNLT*FDDATT Trigger: CGTTGTGGCATCATCAAACCAAGTCAGGTTTCTTAT...GAAGCCGCTGGCTATTTGGTAGCTGCATGGCAAAGAGGTAGTTTGTAGAGCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553302.1 |
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| CDS-3UTR GCA 90 bp | TTGAAGTTTGCTTTGTCGATGTGTGATTTAGGACTTCCTCTTGTTTCAAGCCATCAGGGTGTTTCCTTCTaGCATGCTCAAACCCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: LKFALSMCDLGLPLVSSHQGVSF*HAQTLL Trigger: AAGGAGGGTTTGAGCATGGCAGAAGGAAACACCCTG...ATGGCTTGAAACAAGAGGAAGTCCTAAATCACACATCGACAAAGCAAACTTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357971.7 |
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| CDS-3UTR GCA 90 bp | CAGAAGGTTCTAACGTTTTTATTGATTAGATTTGTGTACAGTGGTAATCCTTCCCCTTGCAATTGTCCTTaGACTGTGCCCCGGTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: QKVLTFLLIRFVYSGNPSPCNCP*TVPRSV Trigger: CACTGACCGGGGCACAGTGCAAGGACAATTGCAAGG...GGAAGGATTACCACTGTACACAAATCTAATCAATAAAAACGTTAGAACCTTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000555463.1 |
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| CDS-3UTR GCA 90 bp | CAGAAGGTTCTAACGTTTTTATTGATTAGATTTGTGTACAGTGGTAATCCTTCCCAGGGTGTTTCCTTCTaGCATGCTCAAACCTGGGGC | + |
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Preference number: 4 (lower is better) Translates to: QKVLTFLLIRFVYSGNPSQGVSF*HAQTWG Trigger: GCCCCAGGTTTGAGCATGGCAGAAGGAAACACCCTG...GGAAGGATTACCACTGTACACAAATCTAATCAATAAAAACGTTAGAACCTTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000555463.1 |
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| CDS-3UTR CCA 90 bp | CAGAAGGTTCTAACGTTTTTATTGATTAGATTTGTGTACAGTGGTAATCCTTCCGCACACCCCAAGGTCTaGGAGCGTCGTTCTCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: QKVLTFLLIRFVYSGNPSAHPKV*ERRSQK Trigger: TTTCTGAGAACGACGCTCCCAGACCTTGGGGTGTGC...GGAAGGATTACCACTGTACACAAATCTAATCAATAAAAACGTTAGAACCTTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000555463.1 |
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| CDS-3UTR GCA 90 bp | CAGAAGGTTCTAACGTTTTTATTGATTAGATTTGTGTACAGTGGTAATCCTTCCATTGTCCTTGCACTGTaGCCCGGTCAGTGTTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QKVLTFLLIRFVYSGNPSIVLAL*PGQCSG Trigger: TCCAGAACACTGACCGGGGCACAGTGCAAGGACAAT...GGAAGGATTACCACTGTACACAAATCTAATCAATAAAAACGTTAGAACCTTCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000555463.1 |
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| CDS-3UTR GCA 90 bp | AAGTTTGCTTTGTCGATGTGTGATTTAGGACTTCCTCTTGTTTCAAGCCATTCCCTGGAACACAGCTCTTaGTGTGAGTTTCAGCAATTC | + |
|
Preference number: 4 (lower is better) Translates to: KFALSMCDLGLPLVSSHSLEHSS*CEFQQF Trigger: GAATTGCTGAAACTCACAGCAAGAGCTGTGTTCCAG...GGAATGGCTTGAAACAAGAGGAAGTCCTAAATCACACATCGACAAAGCAAACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357971.7 |
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| CDS-3UTR CCA 90 bp | TTGTTGAAGTTTGCTTTGTCGATGTGTGATTTAGGACTTCCTCTTGTTTCAAGCGCATATGACGCACCTTaGAGATGGGACCTTGCAATT | + |
|
Preference number: 4 (lower is better) Translates to: LLKFALSMCDLGLPLVSSAYDAP*RWDLAI Trigger: AATTGCAAGGTCCCATCTCCAAGGTGCGTCATATGC...GCTTGAAACAAGAGGAAGTCCTAAATCACACATCGACAAAGCAAACTTCAACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357971.7 |
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| CDS-3UTR CCA 90 bp | CAGAAGGTTCTAACGTTTTTATTGATTAGATTTGTGTACAGTGGTAATCCTTCCGACGCACCTTGGAGATaGGACCTTGCAATTGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QKVLTFLLIRFVYSGNPSDAPWR*DLAIVL Trigger: AAGGACAATTGCAAGGTCCCATCTCCAAGGTGCGTC...GGAAGGATTACCACTGTACACAAATCTAATCAATAAAAACGTTAGAACCTTCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000555463.1 |
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| CDS-3UTR TCA 90 bp | TTACCGATTGCACAGCATTTTCATACTCATTGCTCTACAAACTACCTCTTTGCCATAATAACAGCAGGGTaGTCTTCCATTTACACCATG | + |
|
Preference number: 4 (lower is better) Translates to: LPIAQHFHTHCSTNYLFAIITAG*SSIYTM Trigger: CATGGTGTAAATGGAAGATCACCCTGCTGTTATTAT...GGCAAAGAGGTAGTTTGTAGAGCAATGAGTATGAAAATGCTGTGCAATCGGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553302.1 |
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| CDS-3UTR GCA 90 bp | CAGAAGGTTCTAACGTTTTTATTGATTAGATTTGTGTACAGTGGTAATCCTTCCTTGGAGATGGGACCTTaGAATTGTCCTTGCACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: QKVLTFLLIRFVYSGNPSLEMGP*NCPCTV Trigger: CACAGTGCAAGGACAATTGCAAGGTCCCATCTCCAA...GGAAGGATTACCACTGTACACAAATCTAATCAATAAAAACGTTAGAACCTTCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000555463.1 |
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| CDS-3UTR TCA 90 bp | TTACCGATTGCACAGCATTTTCATACTCATTGCTCTACAAACTACCTCTTTGCCAATTTCATAATCCACTaGTATCAGGGTGTTTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LPIAQHFHTHCSTNYLFANFIIH*YQGVSF Trigger: GAAGGAAACACCCTGATATCAGTGGATTATGAAATT...GGCAAAGAGGTAGTTTGTAGAGCAATGAGTATGAAAATGCTGTGCAATCGGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553302.1 |
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| CDS-3UTR TCA 90 bp | TTGAAGTTTGCTTTGTCGATGTGTGATTTAGGACTTCCTCTTGTTTCAAGCCATTCAACAGTCATTTCCTaGGTATGCTTACGGAAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LKFALSMCDLGLPLVSSHSTVIS*VCLRKN Trigger: GTTTTTCCGTAAGCATACTCAGGAAATGACTGTTGA...ATGGCTTGAAACAAGAGGAAGTCCTAAATCACACATCGACAAAGCAAACTTCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000357971.7 |
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| CDS-3UTR TCA 90 bp | CAGAAGGTTCTAACGTTTTTATTGATTAGATTTGTGTACAGTGGTAATCCTTCCGTACAAGTTCTTCTTTaGAGGAGCTCCAGAAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QKVLTFLLIRFVYSGNPSVQVLL*RSSRKA Trigger: GGCTTTTCTGGAGCTCCTTCAAAGAAGAACTTGTAC...GGAAGGATTACCACTGTACACAAATCTAATCAATAAAAACGTTAGAACCTTCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000555463.1 |
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| CDS-3UTR TCA 90 bp | CAGAAGGTTCTAACGTTTTTATTGATTAGATTTGTGTACAGTGGTAATCCTTCCTTTTTACCCTCAGCCTaGGTATGCTTACGGAAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: QKVLTFLLIRFVYSGNPSFLPSA*VCLRKN Trigger: GTTTTTCCGTAAGCATACTCAGGCTGAGGGTAAAAA...GGAAGGATTACCACTGTACACAAATCTAATCAATAAAAACGTTAGAACCTTCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000555463.1 |
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| CDS-3UTR TCA 90 bp | CAGAAGGTTCTAACGTTTTTATTGATTAGATTTGTGTACAGTGGTAATCCTTCCTGCTTTGTCGATGTGTaGTTTAGGACTTCCTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QKVLTFLLIRFVYSGNPSCFVDV*FRTSSC Trigger: ACAAGAGGAAGTCCTAAATCACACATCGACAAAGCA...GGAAGGATTACCACTGTACACAAATCTAATCAATAAAAACGTTAGAACCTTCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000555463.1 |
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| CDS-3UTR GCA 90 bp | CCATGTTTTACCGATTGCACAGCATTTTCATACTCATTGCTCTACAAACTACCTATCAGGTCATCTAAATaGCAGCTCTTCAATCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: PCFTDCTAFSYSLLYKLPIRSSK*QLFNQC Trigger: ACATTGATTGAAGAGCTGGCATTTAGATGACCTGAT...AGGTAGTTTGTAGAGCAATGAGTATGAAAATGCTGTGCAATCGGTAAAACATGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000553302.1 |
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| CDS-3UTR TCA 90 bp | CAGAAGGTTCTAACGTTTTTATTGATTAGATTTGTGTACAGTGGTAATCCTTCCAATTTCATAATCCACTaGTATCAGGGTGTTTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QKVLTFLLIRFVYSGNPSNFIIH*YQGVSF Trigger: GAAGGAAACACCCTGATATCAGTGGATTATGAAATT...GGAAGGATTACCACTGTACACAAATCTAATCAATAAAAACGTTAGAACCTTCTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000555463.1 |
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| CDS GCA 90 bp | CCAGCAGCAGCCCCGCTCCCGCCAGGCGGGCGGACGCCGGCATCCTaGGGCGGAAGCACGCGGAGGCACAGCCAGGGCCTCCGCCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: PAAAPLPPGGRTPAS*GGSTRRHSQGLRPL Trigger: CAAAGGGCGGAGGCCCTGGCTGTGCCTCCGCGTGCTTCCGCCGCAGGATGCCGGCGTCCGCCCGCCTGGCGGGAGCGGGGCTGCTGCTGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555463.1 |
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| CDS GCA 90 bp | CCTGCGGCGGAAGCACGCGGAGGCACAGCCAGGGCCTCCGCCCTTTaGCAGACAAGGGCACACCCCAAGGTCTGGGAGCGTCGTTCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PAAEARGGTARASAL*QTRAHPKVWERRSQ Trigger: CTGAGAACGACGCTCCCAGACCTTGGGGTGTGCCCTTGTCTGGCAAAGGGCGGAGGCCCTGGCTGTGCCTCCGCGTGCTTCCGCCGCAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555463.1 |
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| CDS-3UTR CAA 90 bp | CAATTGTCCTTGCACTGTGCCCCGGTCAGTGTTCTGGACCCAGCCTACCAATCCGATGGGACCTTGCAATaGTCCTTGCACTGTGCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: QLSLHCAPVSVLDPAYQSDGTLQ*SLHCAP Trigger: CGGGGCACAGTGCAAGGACAATTGCAAGGTCCCATC...GGATTGGTAGGCTGGGTCCAGAACACTGACCGGGGCACAGTGCAAGGACAATTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000357971.7 |
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| CDS CCA 90 bp | GCCAGGGCCTCCGCCCTTTGCCAGACAAGGGCACACCCCAAGGTCTaGGAGCGTCGTTCTCAGAAAAGTACAAGTTCTTCTTTGAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ARASALCQTRAHPKV*ERRSQKSTSSSLKE Trigger: CTCCTTCAAAGAAGAACTTGTACTTTTCTGAGAACGACGCTCCCAGACCTTGGGGTGTGCCCTTGTCTGGCAAAGGGCGGAGGCCCTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555463.1 |
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| CDS-3UTR CAA 90 bp | TTCCTGCATATGACGCACCTTGGAGATGGGACCTTGCAATTGTCCTTGCACTGTATGCTCAAACCCTCCTaGTCTTCCCCACCGGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: FLHMTHLGDGTLQLSLHCMLKPS*SSPPAA Trigger: GGCAGCCGGTGGGGAAGACAAGGAGGGTTTGAGCAT...ACAGTGCAAGGACAATTGCAAGGTCCCATCTCCAAGGTGCGTCATATGCAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357971.7 |
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| CDS GCA 90 bp | GCGGCTTCTAGTTCACATTTGTCAAGAACACGTCCCTTGTTCCTATaGCCACAACCTAGGTTACCACCCCAAAGCCTGCAGGCCACATAC | + |
|
Preference number: 5 (lower is better) Translates to: AASSSHLSRTRPLFL*PQPRLPPQSLQATY Trigger: GTATGTGGCCTGCAGGCTTTGGGGTGGTAACCTAGGTTGTGGGCATAGGAACAAGGGACGTGTTCTTGACAAATGTGAACTAGAAGCCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553302.1 |
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| CDS-3UTR CAA 90 bp | GCACAGCATTTTCATACTCATTGCTCTACAAACTACCTCTTTGCCATGCAGCTAATGCTCAAACCCTCCTaGTCTTCCCCACCGGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: AQHFHTHCSTNYLFAMQLMLKPS*SSPPAA Trigger: GGCAGCCGGTGGGGAAGACAAGGAGGGTTTGAGCAT...TAGCTGCATGGCAAAGAGGTAGTTTGTAGAGCAATGAGTATGAAAATGCTGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000553302.1 |
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| CDS-3UTR CAA 90 bp | ATTCCTGCATATGACGCACCTTGGAGATGGGACCTTGCAATTGTCCTTGCACTGCTTGGAGATGGGACCTaGCAATTGTCCTTGCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: IPAYDAPWRWDLAIVLALLGDGT*QLSLHC Trigger: ACAGTGCAAGGACAATTGCAAGGTCCCATCTCCAAG...CAGTGCAAGGACAATTGCAAGGTCCCATCTCCAAGGTGCGTCATATGCAGGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357971.7 |
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| CDS-3UTR CAA 90 bp | CAGAAGGTTCTAACGTTTTTATTGATTAGATTTGTGTACAGTGGTAATCCTTCCCAGGGCCTCCGCCCTTaGCCAGACAAGGGCACACCC | + |
|
Preference number: 5 (lower is better) Translates to: QKVLTFLLIRFVYSGNPSQGLRP*PDKGTP Trigger: GGGTGTGCCCTTGTCTGGCAAAGGGCGGAGGCCCTG...GGAAGGATTACCACTGTACACAAATCTAATCAATAAAAACGTTAGAACCTTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000555463.1 |
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| CDS-3UTR CAA 90 bp | CATTGCTCTACAAACTACCTCTTTGCCATGCAGCTACCAAATAGCCAGCGGCTTAGCCCTCTATTTCCCTaGGAAGAGAGAAGCTCATTA | + |
|
Preference number: 5 (lower is better) Translates to: HCSTNYLFAMQLPNSQRLSPLFP*EERSSL Trigger: TAATGAGCTTCTCTCTTCCAAGGGAAATAGAGGGCT...AAGCCGCTGGCTATTTGGTAGCTGCATGGCAAAGAGGTAGTTTGTAGAGCAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553302.1 |
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| CDS CCA 90 bp | CCCAGCTTTTTACCCTCAGCCTGCATAACTGGTAGCAAAGCTAACTaGAACACAGCTCTTGCTGTGAGTTTCAGCAATTCTGTTTTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: PSFLPSACITGSKAN*NTALAVSFSNSVFN Trigger: GTTGAAAACAGAATTGCTGAAACTCACAGCAAGAGCTGTGTTCCAGTTAGCTTTGCTACCAGTTATGCAGGCTGAGGGTAAAAAGCTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000357971.7 |
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| CDS-3UTR CAA 90 bp | CAGAAGGTTCTAACGTTTTTATTGATTAGATTTGTGTACAGTGGTAATCCTTCCGATGGGACCTTGCAATaGTCCTTGCACTGTGCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: QKVLTFLLIRFVYSGNPSDGTLQ*SLHCAP Trigger: CGGGGCACAGTGCAAGGACAATTGCAAGGTCCCATC...GGAAGGATTACCACTGTACACAAATCTAATCAATAAAAACGTTAGAACCTTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000555463.1 |
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| CDS-3UTR CAA 90 bp | AGAAAGAGGTCTGAAGAAAGTGCAGCAGCTGCAGAGGAAGCATTTATATATGTTTCAAGAACACGTCCCTaGTTCCTATGCCCACAACCT | + |
|
Preference number: 5 (lower is better) Translates to: RKRSEESAAAAEEAFIYVSRTRP*FLCPQP Trigger: AGGTTGTGGGCATAGGAACAAGGGACGTGTTCTTGA...AACATATATAAATGCTTCCTCTGCAGCTGCTGCACTTTCTTCAGACCTCTTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553302.1 |
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| CDS-3UTR CAA 90 bp | ATTGCTCTACAAACTACCTCTTTGCCATGCAGCTACCAAATAGCCAGCGGCTTCGCATTTTCATACTCATaGCTCTACAAACTACCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: IALQTTSLPCSYQIASGFAFSYS*LYKLPL Trigger: AAGAGGTAGTTTGTAGAGCAATGAGTATGAAAATGC...GAAGCCGCTGGCTATTTGGTAGCTGCATGGCAAAGAGGTAGTTTGTAGAGCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553302.1 |
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| CDS-3UTR CAA 90 bp | CCATGTTTTACCGATTGCACAGCATTTTCATACTCATTGCTCTACAAACTACCTACCATGTTTTACCGATaGCACAGCATTTTCATACTC | + |
|
Preference number: 5 (lower is better) Translates to: PCFTDCTAFSYSLLYKLPTMFYR*HSIFIL Trigger: GAGTATGAAAATGCTGTGCAATCGGTAAAACATGGT...AGGTAGTTTGTAGAGCAATGAGTATGAAAATGCTGTGCAATCGGTAAAACATGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000553302.1 |
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| CDS CCA 90 bp | CCTTTTAAATTCATTAATACCTGCATAACTGGTAGCAAAGCTAACTaGAACACAGCTCTTGCTGTGAGTTTCAGCAATTCTGTTTTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: PFKFINTCITGSKAN*NTALAVSFSNSVFN Trigger: GTTGAAAACAGAATTGCTGAAACTCACAGCAAGAGCTGTGTTCCAGTTAGCTTTGCTACCAGTTATGCAGGTATTAATGAATTTAAAAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555135.1 |
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| CDS-3UTR CAA 90 bp | TTGTTGAAGTTTGCTTTGTCGATGTGTGATTTAGGACTTCCTCTTGTTTCAAGCTTGTTGAAGTTTGCTTaGTCGATGTGTGATTTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LLKFALSMCDLGLPLVSSLLKFA*SMCDLG Trigger: TCCTAAATCACACATCGACAAAGCAAACTTCAACAA...GCTTGAAACAAGAGGAAGTCCTAAATCACACATCGACAAAGCAAACTTCAACAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357971.7 |
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| CDS-3UTR CAA 90 bp | CAGAAGGTTCTAACGTTTTTATTGATTAGATTTGTGTACAGTGGTAATCCTTCCAGTACAAGTTCTTCTTaGAAGGAGCTCCAGAAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: QKVLTFLLIRFVYSGNPSSTSSS*KELQKS Trigger: GCTTTTCTGGAGCTCCTTCAAAGAAGAACTTGTACT...GGAAGGATTACCACTGTACACAAATCTAATCAATAAAAACGTTAGAACCTTCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000555463.1 |
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| CDS-3UTR CAA 90 bp | CAGAAGGTTCTAACGTTTTTATTGATTAGATTTGTGTACAGTGGTAATCCTTCCTTGTTGAAGTTTGCTTaGTCGATGTGTGATTTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: QKVLTFLLIRFVYSGNPSLLKFA*SMCDLG Trigger: TCCTAAATCACACATCGACAAAGCAAACTTCAACAA...GGAAGGATTACCACTGTACACAAATCTAATCAATAAAAACGTTAGAACCTTCTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000555463.1 |
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| CDS CAA 90 bp | TCCTGCGGCGGAAGCACGCGGAGGCACAGCCAGGGCCTCCGCCCTTaGCCAGACAAGGGCACACCCCAAGGTCTGGGAGCGTCGTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SCGGSTRRHSQGLRP*PDKGTPQGLGASFS Trigger: TGAGAACGACGCTCCCAGACCTTGGGGTGTGCCCTTGTCTGGCAAAGGGCGGAGGCCCTGGCTGTGCCTCCGCGTGCTTCCGCCGCAGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555463.1 |
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| CDS CCA 72 bp | TGCAATTGTCCTTGCACTGTGCCCCGGTCAGTGTTCTaGACCCAGCCTACCAATCCCAGCTTTTTACCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: CNCPCTVPRSVF*TQPTNPSFLPS Trigger: TGAGGGTAAAAAGCTGGGATTGGTAGGCTGGGTCCAGAACACTGACCGGGGCACAGTGCAAGGACAATTGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000238618.8 ENST00000357971.7 ENST00000555463.1 ENST00000555694.5 |
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| CDS CCA 72 bp | TCCGCCCTTTGCCAGACAAGGGCACACCCCAAGGTCTaGGAGCGTCGTTCTCAGAAAAGTACAAGTTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SALCQTRAHPKV*ERRSQKSTSSS Trigger: AGAAGAACTTGTACTTTTCTGAGAACGACGCTCCCAGACCTTGGGGTGTGCCCTTGTCTGGCAAAGGGCGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555463.1 |
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| CDS GCA 72 bp | AGTTCACATTTGTCAAGAACACGTCCCTTGTTCCTATaGCCACAACCTAGGTTACCACCCCAAAGCCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SSHLSRTRPLFL*PQPRLPPQSLQ Trigger: CTGCAGGCTTTGGGGTGGTAACCTAGGTTGTGGGCATAGGAACAAGGGACGTGTTCTTGACAAATGTGAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553302.1 |
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| CDS CAA 72 bp | GCGGCTTCTAGTTCACATTTGTCAAGAACACGTCCCTaGTTCCTATGCCCACAACCTAGGTTACCACCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: AASSSHLSRTRP*FLCPQPRLPPQ Trigger: TTGGGGTGGTAACCTAGGTTGTGGGCATAGGAACAAGGGACGTGTTCTTGACAAATGTGAACTAGAAGCCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553302.1 |
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| CDS CCA 72 bp | TTACCCTCAGCCTGCATAACTGGTAGCAAAGCTAACTaGAACACAGCTCTTGCTGTGAGTTTCAGCAATTCT | + |
|
Preference number: 6 (lower is better) Translates to: LPSACITGSKAN*NTALAVSFSNS Trigger: AGAATTGCTGAAACTCACAGCAAGAGCTGTGTTCCAGTTAGCTTTGCTACCAGTTATGCAGGCTGAGGGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357971.7 |
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| CDS CCA 72 bp | TTCATTAATACCTGCATAACTGGTAGCAAAGCTAACTaGAACACAGCTCTTGCTGTGAGTTTCAGCAATTCT | + |
|
Preference number: 6 (lower is better) Translates to: FINTCITGSKAN*NTALAVSFSNS Trigger: AGAATTGCTGAAACTCACAGCAAGAGCTGTGTTCCAGTTAGCTTTGCTACCAGTTATGCAGGTATTAATGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555135.1 |
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