RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ACVR2B (Homo sapiens)

Ensembl gene IDs: ENSG00000114739

Ensembl transcript IDs: ENST00000352511.5, ENST00000461232.1, ENST00000465020.5

Found 562 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATAAAACTATCCCGTCCAGTGCACCTCTGTCTAGAAGCAGCAGCCTaGAGCCAGCGGGCAGGGTCTGGGGGACAGGTCTTCAGCTGGGCC +
Preference number: 1 (lower is better)
Translates to: IKLSRPVHLCLEAAA*SQRAGSGGQVFSWA
Trigger: GGCCCAGCTGAAGACCTGTCCCCCAGACCCTGCCCGCTGGCTTCAGGCTGCTGCTTCTAGACAGAGGTGCACTGGACGGGATAGTTTTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR GCA 90 bp CCCCAGCGAGGCAGGCCTTGGCAGACTCCACCCAGGAAATCCTCTTaGCCTATCTGTGCAGGACAATCCCCTGTGGGCATTTCCCTGAAC +
Preference number: 1 (lower is better)
Translates to: PQRGRPWQTPPRKSS*PICAGQSPVGISLN
Trigger: GTTCAGGGAAATGCCCACAGGGGATTGTCCTGCACAGATAGGGCAAGAGGATTTCCTGGGTGGAGTCTGCCAAGGCCTGCCTCGCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR GCA 90 bp GGACATGATGTATTCAGAGTCAGAATCAGCTGGCACGTGTGGGTATaGCCTCCCCAGGCAGGACTGGTCCCACAGGCTCCTCTCCAGAGC +
Preference number: 1 (lower is better)
Translates to: GHDVFRVRISWHVWV*PPQAGLVPQAPLQS
Trigger: GCTCTGGAGAGGAGCCTGTGGGACCAGTCCTGCCTGGGGAGGGCATACCCACACGTGCCAGCTGATTCTGACTCTGAATACATCATGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR GCA 90 bp CTTGGGACCCTCACTGGGAACACACTGACCTTGTGTCCCATGGTCTaGGGAACAGCAGGTCTACAGGACTGCAGGAGAGCCCAGGAAGGT +
Preference number: 1 (lower is better)
Translates to: LGTLTGNTLTLCPMV*GTAGLQDCRRAQEG
Trigger: ACCTTCCTGGGCTCTCCTGCAGTCCTGTAGACCTGCTGTTCCGCAGACCATGGGACACAAGGTCAGTGTGTTCCCAGTGAGGGTCCCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR CCA 90 bp AACACCCCCAAGTCCGGACATGATGTATTCAGAGTCAGAATCAGCTaGCACGTGTGGGTATGCCCTCCCCAGGCAGGACTGGTCCCACAG +
Preference number: 1 (lower is better)
Translates to: NTPKSGHDVFRVRIS*HVWVCPPQAGLVPQ
Trigger: CTGTGGGACCAGTCCTGCCTGGGGAGGGCATACCCACACGTGCCAGCTGATTCTGACTCTGAATACATCATGTCCGGACTTGGGGGTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR GCA 90 bp CAGGCCTTGGCAGACTCCACCCAGGAAATCCTCTTGCCCTATCTGTaGAGGACAATCCCCTGTGGGCATTTCCCTGAACTGCTCCAAGAG +
Preference number: 1 (lower is better)
Translates to: QALADSTQEILLPYL*RTIPCGHFPELLQE
Trigger: CTCTTGGAGCAGTTCAGGGAAATGCCCACAGGGGATTGTCCTGCACAGATAGGGCAAGAGGATTTCCTGGGTGGAGTCTGCCAAGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR GCA 90 bp CTCCTAAGCACAGCCCACTTGCAGCCCTTGCCCCTGAGCAACTCATaGAAAGAACTCCTGCTGAGGACCAATGGTCCCAGGAGAAAACCC +
Preference number: 1 (lower is better)
Translates to: LLSTAHLQPLPLSNS*KELLLRTNGPRRKP
Trigger: GGGTTTTCTCCTGGGACCATTGGTCCTCAGCAGGAGTTCTTTGCATGAGTTGCTCAGGGGCAAGGGCTGCAAGTGGGCTGTGCTTAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR TCA 90 bp GGCAAAACCCTTCACTCCCAGACACGCTGCACTAAAAGACTGGCCTaGGTCACGGTGTGCTTCACAGAGGCGCCACAGATCTCTTCCAAC +
Preference number: 1 (lower is better)
Translates to: GKTLHSQTRCTKRLA*VTVCFTEAPQISSN
Trigger: GTTGGAAGAGATCTGTGGCGCCTCTGTGAAGCACACCGTGACTCAGGCCAGTCTTTTAGTGCAGCGTGTCTGGGAGTGAAGGGTTTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR TCA 90 bp CAAAGAGAAAGCGGGAAAAACGAATCCCAAAGGACAGGAGGTGGCTaGGGCTCTTCAGCATGGCGCTGGTTCTGCATCCACAGCTCAGCA +
Preference number: 1 (lower is better)
Translates to: QRESGKNESQRTGGG*GSSAWRWFCIHSSA
Trigger: TGCTGAGCTGTGGATGCAGAACCAGCGCCATGCTGAAGAGCCTCAGCCACCTCCTGTCCTTTGGGATTCGTTTTTCCCGCTTTCTCTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR CCA 90 bp CTTGCCCCTGAGCAACTCATGCAAAGAACTCCTGCTGAGGACCAATaGTCCCAGGAGAAAACCCAGCTTATGCCAGGCCAGGATGTTCTG +
Preference number: 1 (lower is better)
Translates to: LAPEQLMQRTPAEDQ*SQEKTQLMPGQDVL
Trigger: CAGAACATCCTGGCCTGGCATAAGCTGGGTTTTCTCCTGGGACCATTGGTCCTCAGCAGGAGTTCTTTGCATGAGTTGCTCAGGGGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR TCA 90 bp AATGCTCGGCCTCCACAAGGTCCTTCCCCTCAATTCCTGGTTACCTaGGAAGTAGCCTCCATACTAAAGGATGCTGCTCCGAATGTGCCC +
Preference number: 1 (lower is better)
Translates to: NARPPQGPSPQFLVT*EVASILKDAAPNVP
Trigger: GGGCACATTCGGAGCAGCATCCTTTAGTATGGAGGCTACTTCTCAGGTAACCAGGAATTGAGGGGAAGGACCTTGTGGAGGCCGAGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR TCA 90 bp CAGAACCAGATATACCACCTGATGGGTGCACTTTACACCACAGCATaGGGGGAAGAGTGGCCTGAAGCCCAAAGAACTGGCATGGACCAC +
Preference number: 1 (lower is better)
Translates to: QNQIYHLMGALYTTA*GEEWPEAQRTGMDH
Trigger: GTGGTCCATGCCAGTTCTTTGGGCTTCAGGCCACTCTTCCCCTCATGCTGTGGTGTAAAGTGCACCCATCAGGTGGTATATCTGGTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR CCA 90 bp CAAACAAAGAGAAAGCGGGAAAAACGAATCCCAAAGGACAGGAGGTaGCTGAGGCTCTTCAGCATGGCGCTGGTTCTGCATCCACAGCTC +
Preference number: 1 (lower is better)
Translates to: QTKRKREKRIPKDRR*LRLFSMALVLHPQL
Trigger: GAGCTGTGGATGCAGAACCAGCGCCATGCTGAAGAGCCTCAGCCACCTCCTGTCCTTTGGGATTCGTTTTTCCCGCTTTCTCTTTGTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR TCA 90 bp CAGGACTGCAGGAGAGCCCAGGAAGGTAGCCCATGCTCGTATAGCTaGGTTACCACTTTTAATCTTGGTCTGCCATCTATGCCCCAGAGA +
Preference number: 1 (lower is better)
Translates to: QDCRRAQEGSPCSYS*VTTFNLGLPSMPQR
Trigger: TCTCTGGGGCATAGATGGCAGACCAAGATTAAAAGTGGTAACTCAGCTATACGAGCATGGGCTACCTTCCTGGGCTCTCCTGCAGTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR TCA 90 bp CAAACACTTAAGATGACTGACTTGGGACCCTCACTGGGAACACACTaGCCTTGTGTCCCATGGTCTGCGGAACAGCAGGTCTACAGGACT +
Preference number: 1 (lower is better)
Translates to: QTLKMTDLGPSLGTH*PCVPWSAEQQVYRT
Trigger: AGTCCTGTAGACCTGCTGTTCCGCAGACCATGGGACACAAGGTCAGTGTGTTCCCAGTGAGGGTCCCAAGTCAGTCATCTTAAGTGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR GCA 90 bp AGTGCCCACGCTCAGCAGGGTTCCTGCATGTGTACGTTAAAAGTCTaGAGTATCAAGAGGACCCAGATGGCGACACTGTTCAACATGAGG +
Preference number: 1 (lower is better)
Translates to: SAHAQQGSCMCTLKV*SIKRTQMATLFNMR
Trigger: CCTCATGTTGAACAGTGTCGCCATCTGGGTCCTCTTGATACTGCAGACTTTTAACGTACACATGCAGGAACCCTGCTGAGCGTGGGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR GCA 90 bp CCCTCAATTCCTGGTTACCTGAGAAGTAGCCTCCATACTAAAGGATaGTGCTCCGAATGTGCCCGAGTCCAGTGTAGCTCTGTTCCAAAC +
Preference number: 1 (lower is better)
Translates to: PSIPGYLRSSLHTKG*CSECARVQCSSVPN
Trigger: GTTTGGAACAGAGCTACACTGGACTCGGGCACATTCGGAGCAGCATCCTTTAGTATGGAGGCTACTTCTCAGGTAACCAGGAATTGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR GCA 90 bp CATGCTGGACAACAAAGGCTAATAATGCTCACCATCTTCCCTCACTaGCAGGTGTCACTTTCTCCTAAGCACAGCCCACTTGCAGCCCTT +
Preference number: 1 (lower is better)
Translates to: HAGQQRLIMLTIFPH*QVSLSPKHSPLAAL
Trigger: AAGGGCTGCAAGTGGGCTGTGCTTAGGAGAAAGTGACACCTGGCAGTGAGGGAAGATGGTGAGCATTATTAGCCTTTGTTGTCCAGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR GCA 90 bp AGCGAGCCAACCCAACCATTCTCACTGACCAGAGAGGACAAAATGTaGCTGGCAGCTCTCCATTTAATTGGATCACTGCATCCACATGCC +
Preference number: 1 (lower is better)
Translates to: SEPTQPFSLTREDKM*LAALHLIGSLHPHA
Trigger: GGCATGTGGATGCAGTGATCCAATTAAATGGAGAGCTGCCAGGCACATTTTGTCCTCTCTGGTCAGTGAGAATGGTTGGGTTGGCTCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR CCA 90 bp CCACAATGCCATGACGAGCTTGCCAGAAGCCCTTTCTTCAGTCCTTaGGAAGAGTTTTGCTTTAAAACAAGTGCCCACGCTCAGCAGGGT +
Preference number: 1 (lower is better)
Translates to: PQCHDELARSPFFSP*EEFCFKTSAHAQQG
Trigger: ACCCTGCTGAGCGTGGGCACTTGTTTTAAAGCAAAACTCTTCCCAAGGACTGAAGAAAGGGCTTCTGGCAAGCTCGTCATGGCATTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR TCA 90 bp GAAGTCAACAGTCCACTGAATGGGGCAGAGAACAAACACTTAAGATaGCTGACTTGGGACCCTCACTGGGAACACACTGACCTTGTGTCC +
Preference number: 1 (lower is better)
Translates to: EVNSPLNGAENKHLR*LTWDPHWEHTDLVS
Trigger: GGACACAAGGTCAGTGTGTTCCCAGTGAGGGTCCCAAGTCAGTCATCTTAAGTGTTTGTTCTCTGCCCCATTCAGTGGACTGTTGACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR GCA 90 bp TCAATTCCTGGTTACCTGAGAAGTAGCCTCCATACTAAAGGATGCTaGTCCGAATGTGCCCGAGTCCAGTGTAGCTCTGTTCCAAACCCT +
Preference number: 1 (lower is better)
Translates to: SIPGYLRSSLHTKGC*SECARVQCSSVPNP
Trigger: AGGGTTTGGAACAGAGCTACACTGGACTCGGGCACATTCGGAGCAGCATCCTTTAGTATGGAGGCTACTTCTCAGGTAACCAGGAATTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR TCA 90 bp AAATTCAAAGCAGGGCTCGAGATGGCTCACTCCTCAAAGAACACATaGCAGCAAACAGACAAGCATTTACCCGGGGCAAAAGGCCCATCT +
Preference number: 1 (lower is better)
Translates to: KFKAGLEMAHSSKNT*QQTDKHLPGAKGPS
Trigger: AGATGGGCCTTTTGCCCCGGGTAAATGCTTGTCTGTTTGCTGTCATGTGTTCTTTGAGGAGTGAGCCATCTCGAGCCCTGCTTTGAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR TCA 90 bp ACACATTGCAGGCCCTCTCTCCTCCCAATCCACAAGAAGCTGAGCTaGATATCACTGTCCTACACAACCACAAGTGGAGTTTTGGCCAAA +
Preference number: 1 (lower is better)
Translates to: THCRPSLLPIHKKLS*ISLSYTTTSGVLAK
Trigger: TTTGGCCAAAACTCCACTTGTGGTTGTGTAGGACAGTGATATTCAGCTCAGCTTCTTGTGGATTGGGAGGAGAGAGGGCCTGCAATGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR CCA 90 bp AAAATGTTTCATCCTATGCCCAAGGCCAAGTTAGTGAAAAGAAACTaGTCAGGGCCAGCAGGTAAGTCAGGGCTGCACCCAATCTCAGAC +
Preference number: 1 (lower is better)
Translates to: KMFHPMPKAKLVKRN*SGPAGKSGLHPISD
Trigger: GTCTGAGATTGGGTGCAGCCCTGACTTACCTGCTGGCCCTGACCAGTTTCTTTTCACTAACTTGGCCTTGGGCATAGGATGAAACATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR TCA 90 bp TGTCACATGAAGTCATTATGGAAAAGAGCACAGGCAGAGGCTCTATaGCCCAGTAAATTCAAAGCAGGGCTCGAGATGGCTCACTCCTCA +
Preference number: 1 (lower is better)
Translates to: CHMKSLWKRAQAEAL*PSKFKAGLEMAHSS
Trigger: TGAGGAGTGAGCCATCTCGAGCCCTGCTTTGAATTTACTGGGTCATAGAGCCTCTGCCTGTGCTCTTTTCCATAATGACTTCATGTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR TCA 90 bp AATTACCTAGGCCCTAGACAATCCAAAGACACTGCCCTAGAGAAATaGAGGCAGTGCAGGGCCCATCACCACACATTGGCATTTAGAGAA +
Preference number: 1 (lower is better)
Translates to: NYLGPRQSKDTALEK*RQCRAHHHTLAFRE
Trigger: TTCTCTAAATGCCAATGTGTGGTGATGGGCCCTGCACTGCCTTCATTTCTCTAGGGCAGTGTCTTTGGATTGTCTAGGGCCTAGGTAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR TCA 90 bp GTAAAACACATTGCAGGCCCTCTCTCCTCCCAATCCACAAGAAGCTaGGCTGAATATCACTGTCCTACACAACCACAAGTGGAGTTTTGG +
Preference number: 1 (lower is better)
Translates to: VKHIAGPLSSQSTRS*AEYHCPTQPQVEFW
Trigger: CCAAAACTCCACTTGTGGTTGTGTAGGACAGTGATATTCAGCTCAGCTTCTTGTGGATTGGGAGGAGAGAGGGCCTGCAATGTGTTTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR GCA 90 bp TTACGGAGAAATTATTTGGCTAAACACACACTTAACTCGTGGCAGTaGTCTGAGAAAACCCCACTCGGGCTAAAGCACTTGCAGGGACTG +
Preference number: 1 (lower is better)
Translates to: LRRNYLAKHTLNSWQ*SEKTPLGLKHLQGL
Trigger: CAGTCCCTGCAAGTGCTTTAGCCCGAGTGGGGTTTTCTCAGAGCACTGCCACGAGTTAAGTGTGTGTTTAGCCAAATAATTTCTCCGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR CCA 90 bp GATTCACGGAGCTTCTTAAAAAGGTATGGTCTGATGCCCCTGAAATaGGAATCAGGCGTGGCCATCTCTCCAAAGGTGTGCCATCAAAAA +
Preference number: 1 (lower is better)
Translates to: DSRSFLKRYGLMPLK*ESGVAISPKVCHQK
Trigger: TTTTTGATGGCACACCTTTGGAGAGATGGCCACGCCTGATTCCCATTTCAGGGGCATCAGACCATACCTTTTTAAGAAGCTCCGTGAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR TCA 90 bp CAGTATCAAGAGGACCCAGATGGCGACACTGTTCAACATGAGGTCTaGGGTAACTGGTTCTTAAAATACCTGGATCACAGAAGTGCATCC +
Preference number: 1 (lower is better)
Translates to: QYQEDPDGDTVQHEV*GNWFLKYLDHRSAS
Trigger: GGATGCACTTCTGTGATCCAGGTATTTTAAGAACCAGTTACCTCAGACCTCATGTTGAACAGTGTCGCCATCTGGGTCCTCTTGATACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR GCA 90 bp AACCAACAGAGAAGTTCCCAGGACTCAAGACAGAACTCATGCATTTaGAAGAAGACCCATCCTCACCTGCCTGAAAAACTTGTGGGTCAT +
Preference number: 1 (lower is better)
Translates to: NQQRSSQDSRQNSCI*KKTHPHLPEKLVGH
Trigger: ATGACCCACAAGTTTTTCAGGCAGGTGAGGATGGGTCTTCTTGCAAATGCATGAGTTCTGTCTTGAGTCCTGGGAACTTCTCTGTTGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR GCA 90 bp ACACTCAACCAACAGAGAAGTTCCCAGGACTCAAGACAGAACTCATaGATTTGCAAGAAGACCCATCCTCACCTGCCTGAAAAACTTGTG +
Preference number: 1 (lower is better)
Translates to: TLNQQRSSQDSRQNS*ICKKTHPHLPEKLV
Trigger: CACAAGTTTTTCAGGCAGGTGAGGATGGGTCTTCTTGCAAATGCATGAGTTCTGTCTTGAGTCCTGGGAACTTCTCTGTTGGTTGAGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR CCA 90 bp AGCGGGCAGGGTCTGGGGGACAGGTCTTCAGCTGGGCCTCAGGACTaGCCATTATGCATACCAGAAATTAACTTAATTATTCATTATATA +
Preference number: 1 (lower is better)
Translates to: SGQGLGDRSSAGPQD*PLCIPEINLIIHYI
Trigger: TATATAATGAATAATTAAGTTAATTTCTGGTATGCATAATGGCCAGTCCTGAGGCCCAGCTGAAGACCTGTCCCCCAGACCCTGCCCGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR CCA 90 bp TTTCCCTTACGGAGAAATTATTTGGCTAAACACACACTTAACTCGTaGCAGTGCTCTGAGAAAACCCCACTCGGGCTAAAGCACTTGCAG +
Preference number: 1 (lower is better)
Translates to: FPLRRNYLAKHTLNS*QCSEKTPLGLKHLQ
Trigger: CTGCAAGTGCTTTAGCCCGAGTGGGGTTTTCTCAGAGCACTGCCACGAGTTAAGTGTGTGTTTAGCCAAATAATTTCTCCGTAAGGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR GCA 90 bp GGTCTGGGGGACAGGTCTTCAGCTGGGCCTCAGGACTGGCCATTATaGATACCAGAAATTAACTTAATTATTCATTATATATCGCCACCA +
Preference number: 1 (lower is better)
Translates to: GLGDRSSAGPQDWPL*IPEINLIIHYISPP
Trigger: TGGTGGCGATATATAATGAATAATTAAGTTAATTTCTGGTATGCATAATGGCCAGTCCTGAGGCCCAGCTGAAGACCTGTCCCCCAGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR GCA 90 bp AATGTGCCTGGCAGCTCTCCATTTAATTGGATCACTGCATCCACATaGCACCCTCCCCACTTTTCTGAACAATTACTTAACTGGGTAATT +
Preference number: 1 (lower is better)
Translates to: NVPGSSPFNWITAST*HPPHFSEQLLNWVI
Trigger: AATTACCCAGTTAAGTAATTGTTCAGAAAAGTGGGGAGGGTGGCATGTGGATGCAGTGATCCAATTAAATGGAGAGCTGCCAGGCACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR CCA 90 bp TTCCATACACACAAAGAGTGGTGTGTACATTGCTTTAGTGCCCTGTaGTTGGTTTACAGTAGTTCTCAGAATTACCTAGGCCCTAGACAA +
Preference number: 1 (lower is better)
Translates to: FHTHKEWCVHCFSAL*LVYSSSQNYLGPRQ
Trigger: TTGTCTAGGGCCTAGGTAATTCTGAGAACTACTGTAAACCAACCACAGGGCACTAAAGCAATGTACACACCACTCTTTGTGTGTATGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR GCA 90 bp GGTTTATATAACCCCTTCCATACACACAAAGAGTGGTGTGTACATTaGTTTAGTGCCCTGTGGTTGGTTTACAGTAGTTCTCAGAATTAC +
Preference number: 1 (lower is better)
Translates to: GLYNPFHTHKEWCVH*FSALWLVYSSSQNY
Trigger: GTAATTCTGAGAACTACTGTAAACCAACCACAGGGCACTAAAGCAATGTACACACCACTCTTTGTGTGTATGGAAGGGGTTATATAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR GCA 90 bp AGCGACTGGAAATGTGTTACAAAGAGCTTATCTTTGGAACTAATTTaGGTGCAAGACCAGCCAATTAAATCGCTTTGCCTATTCAGACAC +
Preference number: 1 (lower is better)
Translates to: SDWKCVTKSLSLELI*VQDQPIKSLCLFRH
Trigger: GTGTCTGAATAGGCAAAGCGATTTAATTGGCTGGTCTTGCACGCAAATTAGTTCCAAAGATAAGCTCTTTGTAACACATTTCCAGTCGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR TCA 90 bp ACAACCTATTCTTTTATTTACAATGCTAACATTCTGACGCAAACATaGTTAGGAGAGTCAGGGAATGAGCCCACACTCAACCAACAGAGA +
Preference number: 1 (lower is better)
Translates to: TTYSFIYNANILTQT*LGESGNEPTLNQQR
Trigger: TCTCTGTTGGTTGAGTGTGGGCTCATTCCCTGACTCTCCTAATCATGTTTGCGTCAGAATGTTAGCATTGTAAATAAAAGAATAGGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR TCA 90 bp TGTACAGTTGAAAAATGGCATTGTTGTGGATTTGTGGTGTGGAACTaGAATCTAGAAATATATTTCTACTCTGCGGTAACCCTCTCCCTC +
Preference number: 1 (lower is better)
Translates to: CTVEKWHCCGFVVWN*NLEIYFYSAVTLSL
Trigger: GAGGGAGAGGGTTACCGCAGAGTAGAAATATATTTCTAGATTTCAGTTCCACACCACAAATCCACAACAATGCCATTTTTCAACTGTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR GCA 90 bp TCTTTGGAACTAATTTGCGTGCAAGACCAGCCAATTAAATCGCTTTaGCTATTCAGACACACAAGAATACTGAAAATGGCAGAATTCAAA +
Preference number: 1 (lower is better)
Translates to: SLELICVQDQPIKSL*LFRHTRILKMAEFK
Trigger: TTTGAATTCTGCCATTTTCAGTATTCTTGTGTGTCTGAATAGGCAAAGCGATTTAATTGGCTGGTCTTGCACGCAAATTAGTTCCAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR CCA 90 bp TGGGAACACACTGACCTTGTGTCCCATGGTCTGCGGAACAGCAGGTCTACAGGACCAGCGGGCAGGGTCTaGGGGACAGGTCTTCAGCTG +
Preference number: 2 (lower is better)
Translates to: WEHTDLVSHGLRNSRSTGPAGRV*GTGLQL
Trigger: CAGCTGAAGACCTGTCCCCCAGACCCTGCCCGCTGG...TCCTGTAGACCTGCTGTTCCGCAGACCATGGGACACAAGGTCAGTGTGTTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR CAA 90 bp TCCCCAGCGAGGCAGGCCTTGGCAGACTCCACCCAGGAAATCCTCTaGCCCTATCTGTGCAGGACAATCCCCTGTGGGCATTTCCCTGAA +
Preference number: 2 (lower is better)
Translates to: SPARQALADSTQEIL*PYLCRTIPCGHFPE
Trigger: TTCAGGGAAATGCCCACAGGGGATTGTCCTGCACAGATAGGGCAAGAGGATTTCCTGGGTGGAGTCTGCCAAGGCCTGCCTCGCTGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR CCA 90 bp CTGGGGGACAGGTCTTCAGCTGGGCCTCAGGACTGGCCATTATGCATACCAGAAATCAGCTGGCACGTGTaGGTATGCCCTCCCCAGGCA +
Preference number: 2 (lower is better)
Translates to: LGDRSSAGPQDWPLCIPEISWHV*VCPPQA
Trigger: TGCCTGGGGAGGGCATACCCACACGTGCCAGCTGAT...TTCTGGTATGCATAATGGCCAGTCCTGAGGCCCAGCTGAAGACCTGTCCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR GCA 90 bp CTGGGGGACAGGTCTTCAGCTGGGCCTCAGGACTGGCCATTATGCATACCAGAAAGATGCCCAGGCATGTaGAGTGCCCCTCACACTGTG +
Preference number: 2 (lower is better)
Translates to: LGDRSSAGPQDWPLCIPERCPGM*SAPHTV
Trigger: CACAGTGTGAGGGGCACTGCACATGCCTGGGCATCT...TTCTGGTATGCATAATGGCCAGTCCTGAGGCCCAGCTGAAGACCTGTCCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR CCA 90 bp TGGGAACACACTGACCTTGTGTCCCATGGTCTGCGGAACAGCAGGTCTACAGGACAGCGAGGCAGGCCTTaGCAGACTCCACCCAGGAAA +
Preference number: 2 (lower is better)
Translates to: WEHTDLVSHGLRNSRSTGQRGRP*QTPPRK
Trigger: TTTCCTGGGTGGAGTCTGCCAAGGCCTGCCTCGCTG...TCCTGTAGACCTGCTGTTCCGCAGACCATGGGACACAAGGTCAGTGTGTTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR CAA 90 bp CACCCAGAGAAAAGGCACGCAGGCCTGACCTGTCTGTACTGTGTCTaGACCGCAAAGTCCCACACCAGAACCATGGCTCAACCCTCCCTT +
Preference number: 2 (lower is better)
Translates to: HPEKRHAGLTCLYCV*TAKSHTRTMAQPSL
Trigger: AAGGGAGGGTTGAGCCATGGTTCTGGTGTGGGACTTTGCGGTCAAGACACAGTACAGACAGGTCAGGCCTGCGTGCCTTTTCTCTGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR GCA 90 bp CTGGGGGACAGGTCTTCAGCTGGGCCTCAGGACTGGCCATTATGCATACCAGAATCCCATAGCACCCTGTaGCCCAACACCCAGAGGAAA +
Preference number: 2 (lower is better)
Translates to: LGDRSSAGPQDWPLCIPESHSTL*PNTQRK
Trigger: TTTCCTCTGGGTGTTGGGGCACAGGGTGCTATGGGA...TTCTGGTATGCATAATGGCCAGTCCTGAGGCCCAGCTGAAGACCTGTCCCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR TCA 90 bp TGGGAACACACTGACCTTGTGTCCCATGGTCTGCGGAACAGCAGGTCTACAGGAAAAGGCACGCAGGCCTaGCCTGTCTGTACTGTGTCT +
Preference number: 2 (lower is better)
Translates to: WEHTDLVSHGLRNSRSTGKGTQA*PVCTVS
Trigger: AGACACAGTACAGACAGGTCAGGCCTGCGTGCCTTT...TCCTGTAGACCTGCTGTTCCGCAGACCATGGGACACAAGGTCAGTGTGTTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR CCA 90 bp CTGGGGGACAGGTCTTCAGCTGGGCCTCAGGACTGGCCATTATGCATACCAGAATCTTCAGCATGGCGCTaGTTCTGCATCCACAGCTCA +
Preference number: 2 (lower is better)
Translates to: LGDRSSAGPQDWPLCIPESSAWR*FCIHSS
Trigger: TGAGCTGTGGATGCAGAACCAGCGCCATGCTGAAGA...TTCTGGTATGCATAATGGCCAGTCCTGAGGCCCAGCTGAAGACCTGTCCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR CAA 90 bp AAGTCAGGGCTGCACCCAATCTCAGACTTTCTCCAAACCCCGCTCTaGCTGTTAATGCTCGGCCTCCACAAGGTCCTTCCCCTCAATTCC +
Preference number: 2 (lower is better)
Translates to: KSGLHPISDFLQTPL*LLMLGLHKVLPLNS
Trigger: GGAATTGAGGGGAAGGACCTTGTGGAGGCCGAGCATTAACAGCAAGAGCGGGGTTTGGAGAAAGTCTGAGATTGGGTGCAGCCCTGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR TCA 90 bp CTCCTAGACCCATGCCCTATAAGGAGATCCCCCACCTTCTTCTTGCCATCAGAAGGACACTATAGTGGCTaGGCGTACGGTGGGCCTAAC +
Preference number: 2 (lower is better)
Translates to: LLDPCPIRRSPTFFLPSEGHYSG*AYGGPN
Trigger: GTTAGGCCCACCGTACGCTCAGCCACTATAGTGTCC...TTCTGATGGCAAGAAGAAGGTGGGGGATCTCCTTATAGGGCATGGGTCTAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR TCA 90 bp CTGGGGGACAGGTCTTCAGCTGGGCCTCAGGACTGGCCATTATGCATACCAGAAAGGAGCCTGCTTGGATaGCAGCACACTAGAAAGGAA +
Preference number: 2 (lower is better)
Translates to: LGDRSSAGPQDWPLCIPERSLLG*QHTRKE
Trigger: TTCCTTTCTAGTGTGCTGTCATCCAAGCAGGCTCCT...TTCTGGTATGCATAATGGCCAGTCCTGAGGCCCAGCTGAAGACCTGTCCCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR GCA 90 bp CTCCTAGACCCATGCCCTATAAGGAGATCCCCCACCTTCTTCTTGCCATCAGAAGCATGGCGCTGGTTCTaGATCCACAGCTCAGCACCT +
Preference number: 2 (lower is better)
Translates to: LLDPCPIRRSPTFFLPSEAWRWF*IHSSAP
Trigger: AGGTGCTGAGCTGTGGATGCAGAACCAGCGCCATGC...TTCTGATGGCAAGAAGAAGGTGGGGGATCTCCTTATAGGGCATGGGTCTAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR TCA 90 bp GAAAAGGCACGCAGGCCTGACCTGTCTGTACTGTGTCTTGACCGCAAAGTCCCAACTAAAAGACTGGCCTaGGTCACGGTGTGCTTCACA +
Preference number: 2 (lower is better)
Translates to: EKARRPDLSVLCLDRKVPTKRLA*VTVCFT
Trigger: TGTGAAGCACACCGTGACTCAGGCCAGTCTTTTAGT...TGGGACTTTGCGGTCAAGACACAGTACAGACAGGTCAGGCCTGCGTGCCTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR GCA 90 bp TCTTGCCCTATCTGTGCAGGACAATCCCCTGTGGGCATTTCCCTGAACTGCTCCCATACTAAAGGATGCTaGTCCGAATGTGCCCGAGTC +
Preference number: 2 (lower is better)
Translates to: SCPICAGQSPVGISLNCSHTKGC*SECARV
Trigger: GACTCGGGCACATTCGGAGCAGCATCCTTTAGTATG...GGAGCAGTTCAGGGAAATGCCCACAGGGGATTGTCCTGCACAGATAGGGCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR GCA 90 bp CTGGGGGACAGGTCTTCAGCTGGGCCTCAGGACTGGCCATTATGCATACCAGAAGAGTGGTGTGTACATTaGTTTAGTGCCCTGTGGTTG +
Preference number: 2 (lower is better)
Translates to: LGDRSSAGPQDWPLCIPEEWCVH*FSALWL
Trigger: CAACCACAGGGCACTAAAGCAATGTACACACCACTC...TTCTGGTATGCATAATGGCCAGTCCTGAGGCCCAGCTGAAGACCTGTCCCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR CCA 90 bp CTCCTAGACCCATGCCCTATAAGGAGATCCCCCACCTTCTTCTTGCCATCAGAAAGTAATGTCACCACCTaGGGCGGAACCAGAGGTGCA +
Preference number: 2 (lower is better)
Translates to: LLDPCPIRRSPTFFLPSESNVTT*GGTRGA
Trigger: TGCACCTCTGGTTCCGCCCCAGGTGGTGACATTACT...TTCTGATGGCAAGAAGAAGGTGGGGGATCTCCTTATAGGGCATGGGTCTAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR CCA 90 bp GGCCTGACCTGTCTGTACTGTGTCTTGACCGCAAAGTCCCACACCAGAACCATGGTTCCTGTAACCACTTaGCCAGCCCACATTTTGACC +
Preference number: 2 (lower is better)
Translates to: GLTCLYCVLTAKSHTRTMVPVTT*PAHILT
Trigger: GGTCAAAATGTGGGCTGGCCAAGTGGTTACAGGAAC...CATGGTTCTGGTGTGGGACTTTGCGGTCAAGACACAGTACAGACAGGTCAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR TCA 90 bp TGGGAACACACTGACCTTGTGTCCCATGGTCTGCGGAACAGCAGGTCTACAGGACGTGTCCGCTGTTTGTaGTACAGTAGAGCAATATGC +
Preference number: 2 (lower is better)
Translates to: WEHTDLVSHGLRNSRSTGRVRCL*YSRAIC
Trigger: GCATATTGCTCTACTGTATCACAAACAGCGGACACG...TCCTGTAGACCTGCTGTTCCGCAGACCATGGGACACAAGGTCAGTGTGTTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR TCA 90 bp TGGGAACACACTGACCTTGTGTCCCATGGTCTGCGGAACAGCAGGTCTACAGGATTCATGTCACCCCAGTaGGAAGGAGAAAAAGACACC +
Preference number: 2 (lower is better)
Translates to: WEHTDLVSHGLRNSRSTGFMSPQ*EGEKDT
Trigger: GGTGTCTTTTTCTCCTTCTCACTGGGGTGACATGAA...TCCTGTAGACCTGCTGTTCCGCAGACCATGGGACACAAGGTCAGTGTGTTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR TCA 90 bp CTGGGGGACAGGTCTTCAGCTGGGCCTCAGGACTGGCCATTATGCATACCAGAACCAAACACTCTCACATaGCTATGTCCTATGGCAAAG +
Preference number: 2 (lower is better)
Translates to: LGDRSSAGPQDWPLCIPEPNTLT*LCPMAK
Trigger: CTTTGCCATAGGACATAGTCATGTGAGAGTGTTTGG...TTCTGGTATGCATAATGGCCAGTCCTGAGGCCCAGCTGAAGACCTGTCCCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR TCA 90 bp TGGGAACACACTGACCTTGTGTCCCATGGTCTGCGGAACAGCAGGTCTACAGGACCCAACCATTCTCACTaGCCAGAGAGGACAAAATGT +
Preference number: 2 (lower is better)
Translates to: WEHTDLVSHGLRNSRSTGPNHSH*PERTKC
Trigger: ACATTTTGTCCTCTCTGGTCAGTGAGAATGGTTGGG...TCCTGTAGACCTGCTGTTCCGCAGACCATGGGACACAAGGTCAGTGTGTTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR CCA 90 bp GGGATTCTCTTGATAAAACTATCCCGTCCAGTGCACCTCTGTCTAGAAGCAGCACGAGAGGGAAGCAAATaGGCCTCCCATAGCACCCTG +
Preference number: 2 (lower is better)
Translates to: GILLIKLSRPVHLCLEAAREGSK*ASHSTL
Trigger: CAGGGTGCTATGGGAGGCCCATTTGCTTCCCTCTCG...TGCTGCTTCTAGACAGAGGTGCACTGGACGGGATAGTTTTATCAAGAGAATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR CCA 90 bp CTGGGGGACAGGTCTTCAGCTGGGCCTCAGGACTGGCCATTATGCATACCAGAAGAGGAAACGAGAATGTaGCCAACTGAAGAGAAAGGT +
Preference number: 2 (lower is better)
Translates to: LGDRSSAGPQDWPLCIPEEETRM*PTEEKG
Trigger: ACCTTTCTCTTCAGTTGGCCACATTCTCGTTTCCTC...TTCTGGTATGCATAATGGCCAGTCCTGAGGCCCAGCTGAAGACCTGTCCCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR CCA 90 bp GGGATTCTCTTGATAAAACTATCCCGTCCAGTGCACCTCTGTCTAGAAGCAGCAGGACAGGTCTTCAGCTaGGCCTCAGGACTGGCCATT +
Preference number: 2 (lower is better)
Translates to: GILLIKLSRPVHLCLEAAGQVFS*ASGLAI
Trigger: AATGGCCAGTCCTGAGGCCCAGCTGAAGACCTGTCC...TGCTGCTTCTAGACAGAGGTGCACTGGACGGGATAGTTTTATCAAGAGAATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR CAA 90 bp GCTTACCGAAACCCTGTTCCTGTAACCACTTGGCCAGCCCACATTTaGACCCATGAAGCAAAAACTGAGCTCCGAGAGGGAAGCAAATGG +
Preference number: 2 (lower is better)
Translates to: AYRNPVPVTTWPAHI*THEAKTELREGSKW
Trigger: CCATTTGCTTCCCTCTCGGAGCTCAGTTTTTGCTTCATGGGTCAAAATGTGGGCTGGCCAAGTGGTTACAGGAACAGGGTTTCGGTAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR TCA 90 bp GAAAAGGCACGCAGGCCTGACCTGTCTGTACTGTGTCTTGACCGCAAAGTCCCATTTCTTCAGATCCACTaGGTCTGGACAGACACTCAT +
Preference number: 2 (lower is better)
Translates to: EKARRPDLSVLCLDRKVPFLQIH*VWTDTH
Trigger: ATGAGTGTCTGTCCAGACTCAGTGGATCTGAAGAAA...TGGGACTTTGCGGTCAAGACACAGTACAGACAGGTCAGGCCTGCGTGCCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR TCA 90 bp TGGGAACACACTGACCTTGTGTCCCATGGTCTGCGGAACAGCAGGTCTACAGGATGCCTACCCTCACGATaGAGAGATGCACTGTTTTTA +
Preference number: 2 (lower is better)
Translates to: WEHTDLVSHGLRNSRSTGCLPSR*RDALFL
Trigger: TAAAAACAGTGCATCTCTTCATCGTGAGGGTAGGCA...TCCTGTAGACCTGCTGTTCCGCAGACCATGGGACACAAGGTCAGTGTGTTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR TCA 90 bp TGGGAACACACTGACCTTGTGTCCCATGGTCTGCGGAACAGCAGGTCTACAGGACAATCCACAAGAAGCTaGGCTGAATATCACTGTCCT +
Preference number: 2 (lower is better)
Translates to: WEHTDLVSHGLRNSRSTGQSTRS*AEYHCP
Trigger: AGGACAGTGATATTCAGCTCAGCTTCTTGTGGATTG...TCCTGTAGACCTGCTGTTCCGCAGACCATGGGACACAAGGTCAGTGTGTTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR GCA 90 bp CTCCTAGACCCATGCCCTATAAGGAGATCCCCCACCTTCTTCTTGCCATCAGAACTCCATACTAAAGGATaGTGCTCCGAATGTGCCCGA +
Preference number: 2 (lower is better)
Translates to: LLDPCPIRRSPTFFLPSELHTKG*CSECAR
Trigger: TCGGGCACATTCGGAGCAGCATCCTTTAGTATGGAG...TTCTGATGGCAAGAAGAAGGTGGGGGATCTCCTTATAGGGCATGGGTCTAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR GCA 90 bp CTCCTAGACCCATGCCCTATAAGGAGATCCCCCACCTTCTTCTTGCCATCAGAACCCAGGAAATCCTCTTaGCCTATCTGTGCAGGACAA +
Preference number: 2 (lower is better)
Translates to: LLDPCPIRRSPTFFLPSEPRKSS*PICAGQ
Trigger: TTGTCCTGCACAGATAGGGCAAGAGGATTTCCTGGG...TTCTGATGGCAAGAAGAAGGTGGGGGATCTCCTTATAGGGCATGGGTCTAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR GCA 90 bp TGGGAACACACTGACCTTGTGTCCCATGGTCTGCGGAACAGCAGGTCTACAGGAAGGACAAGAAGGCCATaGTGGACAACAAAGGCTAAT +
Preference number: 2 (lower is better)
Translates to: WEHTDLVSHGLRNSRSTGRTRRP*WTTKAN
Trigger: ATTAGCCTTTGTTGTCCAGCATGGCCTTCTTGTCCT...TCCTGTAGACCTGCTGTTCCGCAGACCATGGGACACAAGGTCAGTGTGTTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR CCA 90 bp CTCCTAGACCCATGCCCTATAAGGAGATCCCCCACCTTCTTCTTGCCATCAGAAATAAATGCCCAGACTTaGCCCAGACAGCCAACCTAC +
Preference number: 2 (lower is better)
Translates to: LLDPCPIRRSPTFFLPSEINAQT*PRQPTY
Trigger: GTAGGTTGGCTGTCTGGGCCAAGTCTGGGCATTTAT...TTCTGATGGCAAGAAGAAGGTGGGGGATCTCCTTATAGGGCATGGGTCTAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR TCA 90 bp GGCCTGACCTGTCTGTACTGTGTCTTGACCGCAAAGTCCCACACCAGAACCATGAGGAAACTCCTCTTCTaGGGAAGGTATGTTCTTATG +
Preference number: 2 (lower is better)
Translates to: GLTCLYCVLTAKSHTRTMRKLLF*GRYVLM
Trigger: CATAAGAACATACCTTCCTCAGAAGAGGAGTTTCCT...CATGGTTCTGGTGTGGGACTTTGCGGTCAAGACACAGTACAGACAGGTCAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR TCA 90 bp GGCCTGACCTGTCTGTACTGTGTCTTGACCGCAAAGTCCCACACCAGAACCATGCATGTGAATTACATGTaGAGCTCCAAACAACCCAAG +
Preference number: 2 (lower is better)
Translates to: GLTCLYCVLTAKSHTRTMHVNYM*SSKQPK
Trigger: CTTGGGTTGTTTGGAGCTTCACATGTAATTCACATG...CATGGTTCTGGTGTGGGACTTTGCGGTCAAGACACAGTACAGACAGGTCAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR TCA 90 bp TGGGAACACACTGACCTTGTGTCCCATGGTCTGCGGAACAGCAGGTCTACAGGAAAGAAACCAATTATCTaGGCCCACCAAAAGTGCATG +
Preference number: 2 (lower is better)
Translates to: WEHTDLVSHGLRNSRSTGKKPII*AHQKCM
Trigger: CATGCACTTTTGGTGGGCTCAGATAATTGGTTTCTT...TCCTGTAGACCTGCTGTTCCGCAGACCATGGGACACAAGGTCAGTGTGTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR GCA 90 bp GGCAAAATTCTAGTTTCAAGAGGGCCATCCAATACTCCCACTTTAATGGAACAGCCCAGGCATGTGCAGTaGCCCTCACACTGTGGACTC +
Preference number: 2 (lower is better)
Translates to: GKILVSRGPSNTPTLMEQPRHVQ*PSHCGL
Trigger: GAGTCCACAGTGTGAGGGGCACTGCACATGCCTGGG...CTGTTCCATTAAAGTGGGAGTATTGGATGGCCCTCTTGAAACTAGAATTTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR GCA 90 bp GAAAAGGCACGCAGGCCTGACCTGTCTGTACTGTGTCTTGACCGCAAAGTCCCAGTAAAGAAAAGCAACTaGTGTAAGGCCTGTTTTGCC +
Preference number: 2 (lower is better)
Translates to: EKARRPDLSVLCLDRKVPVKKSN*CKACFA
Trigger: GGCAAAACAGGCCTTACAGCAGTTGCTTTTCTTTAC...TGGGACTTTGCGGTCAAGACACAGTACAGACAGGTCAGGCCTGCGTGCCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR GCA 90 bp CTCCTAGACCCATGCCCTATAAGGAGATCCCCCACCTTCTTCTTGCCATCAGAAATACCACCTGATGGGTaGACTTTACACCACAGCATG +
Preference number: 2 (lower is better)
Translates to: LLDPCPIRRSPTFFLPSEIPPDG*TLHHSM
Trigger: CATGCTGTGGTGTAAAGTGCACCCATCAGGTGGTAT...TTCTGATGGCAAGAAGAAGGTGGGGGATCTCCTTATAGGGCATGGGTCTAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR CCA 90 bp AAACTAATTTTTGACCTCAGAACCCTTTGTTCAACAGAAATCTCAGGAGGAAGCAGAGGTGCAGGACTCTaGGGTCCCCAGCGAGGCAGG +
Preference number: 2 (lower is better)
Translates to: KLIFDLRTLCSTEISGGSRGAGL*GPQRGR
Trigger: CCTGCCTCGCTGGGGACCCCAGAGTCCTGCACCTCT...GCTTCCTCCTGAGATTTCTGTTGAACAAAGGGTTCTGAGGTCAAAAATTAGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR CCA 90 bp GGGATTCTCTTGATAAAACTATCCCGTCCAGTGCACCTCTGTCTAGAAGCAGCAAGAGTCAGAATCAGCTaGCACGTGTGGGTATGCCCT +
Preference number: 2 (lower is better)
Translates to: GILLIKLSRPVHLCLEAARVRIS*HVWVCP
Trigger: AGGGCATACCCACACGTGCCAGCTGATTCTGACTCT...TGCTGCTTCTAGACAGAGGTGCACTGGACGGGATAGTTTTATCAAGAGAATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR CAA 90 bp TCAGATGACACTCTAGACCCATCCCACCACAATGCCATGACGAGCTaGCCAGAAGCCCTTTCTTCAGTCCTTGGGAAGAGTTTTGCTTTA +
Preference number: 2 (lower is better)
Translates to: SDDTLDPSHHNAMTS*PEALSSVLGKSFAL
Trigger: TAAAGCAAAACTCTTCCCAAGGACTGAAGAAAGGGCTTCTGGCAAGCTCGTCATGGCATTGTGGTGGGATGGGTCTAGAGTGTCATCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR TCA 90 bp TGGGAACACACTGACCTTGTGTCCCATGGTCTGCGGAACAGCAGGTCTACAGGATTTGCTAAGAATATGTaGGCAAGAGTCTCTATCCTC +
Preference number: 2 (lower is better)
Translates to: WEHTDLVSHGLRNSRSTGFAKNM*ARVSIL
Trigger: GAGGATAGAGACTCTTGCTCACATATTCTTAGCAAA...TCCTGTAGACCTGCTGTTCCGCAGACCATGGGACACAAGGTCAGTGTGTTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR TCA 90 bp CTCCTAGACCCATGCCCTATAAGGAGATCCCCCACCTTCTTCTTGCCATCAGAAATTAGGAACATTCACTaGCTAGAGCAAGGTTATGGC +
Preference number: 2 (lower is better)
Translates to: LLDPCPIRRSPTFFLPSEIRNIH*LEQGYG
Trigger: GCCATAACCTTGCTCTAGTCAGTGAATGTTCCTAAT...TTCTGATGGCAAGAAGAAGGTGGGGGATCTCCTTATAGGGCATGGGTCTAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR TCA 90 bp GGGATTCTCTTGATAAAACTATCCCGTCCAGTGCACCTCTGTCTAGAAGCAGCAAGCCCAACTACAGGATaGAGTGCTTTGCTGTCTAAG +
Preference number: 2 (lower is better)
Translates to: GILLIKLSRPVHLCLEAASPTTG*SALLSK
Trigger: CTTAGACAGCAAAGCACTTCATCCTGTAGTTGGGCT...TGCTGCTTCTAGACAGAGGTGCACTGGACGGGATAGTTTTATCAAGAGAATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR TCA 90 bp AAAATGAAGACCACTTTCCGTATTGTGGCAGTGATGCTGAGCTTCCTCAGAAAAACTGCCCTAGAGAAATaGAGGCAGTGCAGGGCCCAT +
Preference number: 2 (lower is better)
Translates to: KMKTTFRIVAVMLSFLRKTALEK*RQCRAH
Trigger: ATGGGCCCTGCACTGCCTTCATTTCTCTAGGGCAGT...TTTTCTGAGGAAGCTCAGCATCACTGCCACAATACGGAAAGTGGTCTTCATTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR GCA 90 bp AGGGCTGCACCCAATCTCAGACTTTCTCCAAACCCCGCTCTTGCTGTTAATGCTCCTCTAGGTAGAGTTTaGAGCATTAGGTTTCCTAAG +
Preference number: 2 (lower is better)
Translates to: RAAPNLRLSPNPALAVNAPLGRV*SIRFPK
Trigger: CTTAGGAAACCTAATGCTGCAAACTCTACCTAGAGG...AGCATTAACAGCAAGAGCGGGGTTTGGAGAAAGTCTGAGATTGGGTGCAGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR GCA 90 bp AAAATGAAGACCACTTTCCGTATTGTGGCAGTGATGCTGAGCTTCCTCAGAAAAAGCACACTAGGTAGATaGCCAGGCATGTGCAGTGCC +
Preference number: 2 (lower is better)
Translates to: KMKTTFRIVAVMLSFLRKSTLGR*PGMCSA
Trigger: GGCACTGCACATGCCTGGGCATCTACCTAGTGTGCT...TTTTCTGAGGAAGCTCAGCATCACTGCCACAATACGGAAAGTGGTCTTCATTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR GCA 90 bp TGGGAACACACTGACCTTGTGTCCCATGGTCTGCGGAACAGCAGGTCTACAGGAAGACAAAAATTCAGATaGGGTGACTGCTGGTTAATT +
Preference number: 2 (lower is better)
Translates to: WEHTDLVSHGLRNSRSTGRQKFR*GDCWLI
Trigger: AATTAACCAGCAGTCACCGCATCTGAATTTTTGTCT...TCCTGTAGACCTGCTGTTCCGCAGACCATGGGACACAAGGTCAGTGTGTTCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR CCA 90 bp CAGGGGATACAGGAAGTACCACAATCAAAAAGTCATGTTTCATTCATACCTGGACCCAAAGAACTGGCATaGACCACACTCCTCCCCAGC +
Preference number: 2 (lower is better)
Translates to: QGIQEVPQSKSHVSFIPGPKELA*TTLLPS
Trigger: GCTGGGGAGGAGTGTGGTCCATGCCAGTTCTTTGGG...TCCAGGTATGAATGAAACATGACTTTTTGATTGTGGTACTTCCTGTATCCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR TCA 90 bp GGGATTCTCTTGATAAAACTATCCCGTCCAGTGCACCTCTGTCTAGAAGCAGCACAATTCCTGGTTACCTaGGAAGTAGCCTCCATACTA +
Preference number: 2 (lower is better)
Translates to: GILLIKLSRPVHLCLEAAQFLVT*EVASIL
Trigger: TAGTATGGAGGCTACTTCTCAGGTAACCAGGAATTG...TGCTGCTTCTAGACAGAGGTGCACTGGACGGGATAGTTTTATCAAGAGAATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR TCA 90 bp CTCCTAGACCCATGCCCTATAAGGAGATCCCCCACCTTCTTCTTGCCATCAGAATGTCATTCTGAACACTaGCCGATCAAGTTACATGTT +
Preference number: 2 (lower is better)
Translates to: LLDPCPIRRSPTFFLPSECHSEH*PIKLHV
Trigger: AACATGTAACTTGATCGGTCAGTGTTCAGAATGACA...TTCTGATGGCAAGAAGAAGGTGGGGGATCTCCTTATAGGGCATGGGTCTAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR TCA 90 bp TTTGTACAGTTGAAAAATGGCATTGTTGTGGATTTGTGGTGTGGAACTGAAATCCCCACCACAATGCCATaGCGAGCTTGCCAGAAGCCC +
Preference number: 2 (lower is better)
Translates to: FVQLKNGIVVDLWCGTEIPTTMP*RACQKP
Trigger: GGGCTTCTGGCAAGCTCGTCATGGCATTGTGGTGGG...GATTTCAGTTCCACACCACAAATCCACAACAATGCCATTTTTCAACTGTACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR GCA 90 bp CAGGGGATACAGGAAGTACCACAATCAAAAAGTCATGTTTCATTCATACCTGGAGTGCTCCTAGACCCATaGCCTATAAGGAGATCCCCC +
Preference number: 2 (lower is better)
Translates to: QGIQEVPQSKSHVSFIPGVLLDP*PIRRSP
Trigger: GGGGGATCTCCTTATAGGGCATGGGTCTAGGAGCAC...TCCAGGTATGAATGAAACATGACTTTTTGATTGTGGTACTTCCTGTATCCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR GCA 90 bp GGGATTCTCTTGATAAAACTATCCCGTCCAGTGCACCTCTGTCTAGAAGCAGCAGAGCTATCTGAAAGATaGTCTGCTGTTACTGGGGTT +
Preference number: 2 (lower is better)
Translates to: GILLIKLSRPVHLCLEAAELSER*SAVTGV
Trigger: AACCCCAGTAACAGCAGAGCATCTTTCAGATAGCTC...TGCTGCTTCTAGACAGAGGTGCACTGGACGGGATAGTTTTATCAAGAGAATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR CCA 90 bp GGGATTCTCTTGATAAAACTATCCCGTCCAGTGCACCTCTGTCTAGAAGCAGCAAGAAGCAAGGATCCTTaGCTACTCTCTGCTAACTTG +
Preference number: 2 (lower is better)
Translates to: GILLIKLSRPVHLCLEAARSKDP*LLSANL
Trigger: CAAGTTAGCAGAGAGTAGCCAAGGATCCTTGCTTCT...TGCTGCTTCTAGACAGAGGTGCACTGGACGGGATAGTTTTATCAAGAGAATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR GCA 90 bp CAGGGGATACAGGAAGTACCACAATCAAAAAGTCATGTTTCATTCATACCTGGACTACAGCCAGGAGCCTaGTTGGATGACAGCACACTA +
Preference number: 2 (lower is better)
Translates to: QGIQEVPQSKSHVSFIPGLQPGA*LDDSTL
Trigger: TAGTGTGCTGTCATCCAAGCAGGCTCCTGGCTGTAG...TCCAGGTATGAATGAAACATGACTTTTTGATTGTGGTACTTCCTGTATCCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR GCA 90 bp GGGATTCTCTTGATAAAACTATCCCGTCCAGTGCACCTCTGTCTAGAAGCAGCAATCTCTCCAAAGGTGTaGCATCAAAAACTCAACAGG +
Preference number: 2 (lower is better)
Translates to: GILLIKLSRPVHLCLEAAISPKV*HQKLNR
Trigger: CCTGTTGAGTTTTTGATGGCACACCTTTGGAGAGAT...TGCTGCTTCTAGACAGAGGTGCACTGGACGGGATAGTTTTATCAAGAGAATCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR CCA 90 bp GGGATTCTCTTGATAAAACTATCCCGTCCAGTGCACCTCTGTCTAGAAGCAGCACCTTCTGCTCATTACTaGATTTCTCCAACTAGGGAT +
Preference number: 2 (lower is better)
Translates to: GILLIKLSRPVHLCLEAAPSAHY*ISPTRD
Trigger: ATCCCTAGTTGGAGAAATCCAGTAATGAGCAGAAGG...TGCTGCTTCTAGACAGAGGTGCACTGGACGGGATAGTTTTATCAAGAGAATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR CCA 90 bp AAACTAATTTTTGACCTCAGAACCCTTTGTTCAACAGAAATCTCAGGAGGAAGCCTGATGCCCCTGAAATaGGAATCAGGCGTGGCCATC +
Preference number: 2 (lower is better)
Translates to: KLIFDLRTLCSTEISGGSLMPLK*ESGVAI
Trigger: GATGGCCACGCCTGATTCCCATTTCAGGGGCATCAG...GCTTCCTCCTGAGATTTCTGTTGAACAAAGGGTTCTGAGGTCAAAAATTAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR CAA 90 bp CATACACACAAAGAGTGGTGTGTACATTGCTTTAGTGCCCTGTGGTaGGTTTACAGTAGTTCTCAGAATTACCTAGGCCCTAGACAATCC +
Preference number: 2 (lower is better)
Translates to: HTHKEWCVHCFSALW*VYSSSQNYLGPRQS
Trigger: GGATTGTCTAGGGCCTAGGTAATTCTGAGAACTACTGTAAACCAACCACAGGGCACTAAAGCAATGTACACACCACTCTTTGTGTGTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR TCA 90 bp GGGATTCTCTTGATAAAACTATCCCGTCCAGTGCACCTCTGTCTAGAAGCAGCATTGTGTCACAGATTCTaGGACGACAAACAAAGAGAA +
Preference number: 2 (lower is better)
Translates to: GILLIKLSRPVHLCLEAALCHRF*DDKQRE
Trigger: TTCTCTTTGTTTGTCGTCTCAGAATCTGTGACACAA...TGCTGCTTCTAGACAGAGGTGCACTGGACGGGATAGTTTTATCAAGAGAATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR TCA 90 bp AAAATGAAGACCACTTTCCGTATTGTGGCAGTGATGCTGAGCTTCCTCAGAAAACACCCGTTAGATCCGTaGAAGACACATCTGCTGTTT +
Preference number: 2 (lower is better)
Translates to: KMKTTFRIVAVMLSFLRKHPLDP*KTHLLF
Trigger: AAACAGCAGATGTGTCTTTCACGGATCTAACGGGTG...TTTTCTGAGGAAGCTCAGCATCACTGCCACAATACGGAAAGTGGTCTTCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR TCA 90 bp AAACTAATTTTTGACCTCAGAACCCTTTGTTCAACAGAAATCTCAGGAGGAAGCCTGTGGGCATTTCCCTaGACTGCTCCAAGAGGAAAC +
Preference number: 2 (lower is better)
Translates to: KLIFDLRTLCSTEISGGSLWAFP*TAPRGN
Trigger: GTTTCCTCTTGGAGCAGTTCAGGGAAATGCCCACAG...GCTTCCTCCTGAGATTTCTGTTGAACAAAGGGTTCTGAGGTCAAAAATTAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR TCA 90 bp GGCAAAATTCTAGTTTCAAGAGGGCCATCCAATACTCCCACTTTAATGGAACAGCCCCAAGTCCGGACATaGTGTATTCAGAGTCAGAAT +
Preference number: 2 (lower is better)
Translates to: GKILVSRGPSNTPTLMEQPQVRT*CIQSQN
Trigger: ATTCTGACTCTGAATACATCATGTCCGGACTTGGGG...CTGTTCCATTAAAGTGGGAGTATTGGATGGCCCTCTTGAAACTAGAATTTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR GCA 90 bp GGGATTCTCTTGATAAAACTATCCCGTCCAGTGCACCTCTGTCTAGAAGCAGCACAGGATGAAGTGCTTTaGTGTCTAAGTTATGTCAAG +
Preference number: 2 (lower is better)
Translates to: GILLIKLSRPVHLCLEAAQDEVL*CLSYVK
Trigger: CTTGACATAACTTAGACAGCAAAGCACTTCATCCTG...TGCTGCTTCTAGACAGAGGTGCACTGGACGGGATAGTTTTATCAAGAGAATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR GCA 90 bp GGGATTCTCTTGATAAAACTATCCCGTCCAGTGCACCTCTGTCTAGAAGCAGCATCAAGACAGAACTCATaGATTTGCAAGAAGACCCAT +
Preference number: 2 (lower is better)
Translates to: GILLIKLSRPVHLCLEAASRQNS*ICKKTH
Trigger: ATGGGTCTTCTTGCAAATGCATGAGTTCTGTCTTGA...TGCTGCTTCTAGACAGAGGTGCACTGGACGGGATAGTTTTATCAAGAGAATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR CCA 90 bp TTTGTACAGTTGAAAAATGGCATTGTTGTGGATTTGTGGTGTGGAACTGAAATCCCAAAGGACAGGAGGTaGCTGAGGCTCTTCAGCATG +
Preference number: 2 (lower is better)
Translates to: FVQLKNGIVVDLWCGTEIPKDRR*LRLFSM
Trigger: CATGCTGAAGAGCCTCAGCCACCTCCTGTCCTTTGG...GATTTCAGTTCCACACCACAAATCCACAACAATGCCATTTTTCAACTGTACAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR CCA 90 bp CATGACCTAACTATTCCTGCAGTAAATTTGCTACATTTGTTAGTCGTTTGTTTCGTGCCCCTCACACTGTaGACTCCAAGACCAGCAAGG +
Preference number: 2 (lower is better)
Translates to: HDLTIPAVNLLHLLVVCFVPLTL*TPRPAR
Trigger: CCTTGCTGGTCTTGGAGTCCACAGTGTGAGGGGCAC...GAAACAAACGACTAACAAATGTAGCAAATTTACTGCAGGAATAGTTAGGTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR CAA 90 bp AGTCTGGTGGATTACTCAAACCACCAGATTCTCATTTCAAAGTTTTaGTACCTGAATCTTATTCGAGTCCCATCCCACCCCAATAGGCAC +
Preference number: 2 (lower is better)
Translates to: SLVDYSNHQILISKF*YLNLIRVPSHPNRH
Trigger: GTGCCTATTGGGGTGGGATGGGACTCGAATAAGATTCAGGTACAAAAACTTTGAAATGAGAATCTGGTGGTTTGAGTAATCCACCAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR TCA 90 bp TTTGTACAGTTGAAAAATGGCATTGTTGTGGATTTGTGGTGTGGAACTGAAATCGCTGATTCCACAGATTaGAGCAGCGAGCCAACCCAA +
Preference number: 2 (lower is better)
Translates to: FVQLKNGIVVDLWCGTEIADSTD*SSEPTQ
Trigger: TTGGGTTGGCTCGCTGCTTCAATCTGTGGAATCAGC...GATTTCAGTTCCACACCACAAATCCACAACAATGCCATTTTTCAACTGTACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR GCA 90 bp TTTGTACAGTTGAAAAATGGCATTGTTGTGGATTTGTGGTGTGGAACTGAAATCCCCCTGAGCAACTCATaGAAAGAACTCCTGCTGAGG +
Preference number: 2 (lower is better)
Translates to: FVQLKNGIVVDLWCGTEIPLSNS*KELLLR
Trigger: CCTCAGCAGGAGTTCTTTGCATGAGTTGCTCAGGGG...GATTTCAGTTCCACACCACAAATCCACAACAATGCCATTTTTCAACTGTACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR CCA 90 bp TTTGTACAGTTGAAAAATGGCATTGTTGTGGATTTGTGGTGTGGAACTGAAATCACTTGGGACCCTCACTaGGAACACACTGACCTTGTG +
Preference number: 2 (lower is better)
Translates to: FVQLKNGIVVDLWCGTEITWDPH*EHTDLV
Trigger: CACAAGGTCAGTGTGTTCCCAGTGAGGGTCCCAAGT...GATTTCAGTTCCACACCACAAATCCACAACAATGCCATTTTTCAACTGTACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR CAA 90 bp AAGACTGATAAATGCCCAGACTTGGCCCAGACAGCCAACCTACAGTaGATGACAATTATTTACAAGGGGGCGTTATCAAACAAAAATGGT +
Preference number: 2 (lower is better)
Translates to: KTDKCPDLAQTANLQ*MTIIYKGALSNKNG
Trigger: ACCATTTTTGTTTGATAACGCCCCCTTGTAAATAATTGTCATCAACTGTAGGTTGGCTGTCTGGGCCAAGTCTGGGCATTTATCAGTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR TCA 90 bp GGCAAAATTCTAGTTTCAAGAGGGCCATCCAATACTCCCACTTTAATGGAACAGGGTTACTTGTCATTCTaGACACTGACCGATCAAGTT +
Preference number: 2 (lower is better)
Translates to: GKILVSRGPSNTPTLMEQGYLSF*TLTDQV
Trigger: AACTTGATCGGTCAGTGTTCAGAATGACAAGTAACC...CTGTTCCATTAAAGTGGGAGTATTGGATGGCCCTCTTGAAACTAGAATTTTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR TCA 90 bp AAACTAATTTTTGACCTCAGAACCCTTTGTTCAACAGAAATCTCAGGAGGAAGCAGGATGAAGGGTAGATaGCTAGATTCACGGAGCTTC +
Preference number: 2 (lower is better)
Translates to: KLIFDLRTLCSTEISGGSRMKGR*LDSRSF
Trigger: GAAGCTCCGTGAATCTAGTCATCTACCCTTCATCCT...GCTTCCTCCTGAGATTTCTGTTGAACAAAGGGTTCTGAGGTCAAAAATTAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR CCA 90 bp CATGACCTAACTATTCCTGCAGTAAATTTGCTACATTTGTTAGTCGTTTGTTTCGCTGCACTAAAAGACTaGCCTGAGTCACGGTGTGCT +
Preference number: 2 (lower is better)
Translates to: HDLTIPAVNLLHLLVVCFAALKD*PESRCA
Trigger: AGCACACCGTGACTCAGGCCAGTCTTTTAGTGCAGC...GAAACAAACGACTAACAAATGTAGCAAATTTACTGCAGGAATAGTTAGGTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR CCA 90 bp AAACTAATTTTTGACCTCAGAACCCTTTGTTCAACAGAAATCTCAGGAGGAAGCCAAAGCATAGCAGGATaGAGGAAACGAGAATGTGGC +
Preference number: 2 (lower is better)
Translates to: KLIFDLRTLCSTEISGGSQSIAG*RKRECG
Trigger: GCCACATTCTCGTTTCCTCCATCCTGCTATGCTTTG...GCTTCCTCCTGAGATTTCTGTTGAACAAAGGGTTCTGAGGTCAAAAATTAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR CCA 90 bp AAACTAATTTTTGACCTCAGAACCCTTTGTTCAACAGAAATCTCAGGAGGAAGCTGGACTTTTCTTTGTTaGCAGGCCTTTTGGAGCCAC +
Preference number: 2 (lower is better)
Translates to: KLIFDLRTLCSTEISGGSWTFLC*QAFWSH
Trigger: GTGGCTCCAAAAGGCCTGCCAACAAAGAAAAGTCCA...GCTTCCTCCTGAGATTTCTGTTGAACAAAGGGTTCTGAGGTCAAAAATTAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR GCA 90 bp TTTGTACAGTTGAAAAATGGCATTGTTGTGGATTTGTGGTGTGGAACTGAAATCACAACCTCCTTTTTCTaGAGAAACACCCCCAAGTCC +
Preference number: 2 (lower is better)
Translates to: FVQLKNGIVVDLWCGTEITTSFF*RNTPKS
Trigger: GGACTTGGGGGTGTTTCTGCAGAAAAAGGAGGTTGT...GATTTCAGTTCCACACCACAAATCCACAACAATGCCATTTTTCAACTGTACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR CCA 90 bp AAAATGAAGACCACTTTCCGTATTGTGGCAGTGATGCTGAGCTTCCTCAGAAAACAAATAAAGTATCACTaGTTTTGGCACTACAGGGGA +
Preference number: 2 (lower is better)
Translates to: KMKTTFRIVAVMLSFLRKQIKYH*FWHYRG
Trigger: TCCCCTGTAGTGCCAAAACCAGTGATACTTTATTTG...TTTTCTGAGGAAGCTCAGCATCACTGCCACAATACGGAAAGTGGTCTTCATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR CAA 90 bp CATTTGAGCATTAGCGACTGGAAATGTGTTACAAAGAGCTTATCTTaGGAACTAATTTGCGTGCAAGACCAGCCAATTAAATCGCTTTGC +
Preference number: 2 (lower is better)
Translates to: HLSISDWKCVTKSLS*ELICVQDQPIKSLC
Trigger: GCAAAGCGATTTAATTGGCTGGTCTTGCACGCAAATTAGTTCCAAAGATAAGCTCTTTGTAACACATTTCCAGTCGCTAATGCTCAAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR TCA 90 bp TTTGTACAGTTGAAAAATGGCATTGTTGTGGATTTGTGGTGTGGAACTGAAATCAACTCTGGAGCTATCTaGAAGATGCTCTGCTGTTAC +
Preference number: 2 (lower is better)
Translates to: FVQLKNGIVVDLWCGTEINSGAI*KMLCCY
Trigger: GTAACAGCAGAGCATCTTTCAGATAGCTCCAGAGTT...GATTTCAGTTCCACACCACAAATCCACAACAATGCCATTTTTCAACTGTACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR GCA 90 bp CAGGGGATACAGGAAGTACCACAATCAAAAAGTCATGTTTCATTCATACCTGGACGTGAAAGACACATCTaGTGTTTCTTAAGCTCACTA +
Preference number: 2 (lower is better)
Translates to: QGIQEVPQSKSHVSFIPGRERHI*CFLSSL
Trigger: TAGTGAGCTTAAGAAACAGCAGATGTGTCTTTCACG...TCCAGGTATGAATGAAACATGACTTTTTGATTGTGGTACTTCCTGTATCCCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR CCA 90 bp CAGGGGATACAGGAAGTACCACAATCAAAAAGTCATGTTTCATTCATACCTGGAACAAGAAGGCCATGCTaGACAACAAAGGCTAATAAT +
Preference number: 2 (lower is better)
Translates to: QGIQEVPQSKSHVSFIPGTRRPC*TTKANN
Trigger: ATTATTAGCCTTTGTTGTCCAGCATGGCCTTCTTGT...TCCAGGTATGAATGAAACATGACTTTTTGATTGTGGTACTTCCTGTATCCCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR CCA 90 bp AAACTAATTTTTGACCTCAGAACCCTTTGTTCAACAGAAATCTCAGGAGGAAGCTGCTTTAGTGCCCTGTaGTTGGTTTACAGTAGTTCT +
Preference number: 2 (lower is better)
Translates to: KLIFDLRTLCSTEISGGSCFSAL*LVYSSS
Trigger: AGAACTACTGTAAACCAACCACAGGGCACTAAAGCA...GCTTCCTCCTGAGATTTCTGTTGAACAAAGGGTTCTGAGGTCAAAAATTAGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR TCA 90 bp TTTGTACAGTTGAAAAATGGCATTGTTGTGGATTTGTGGTGTGGAACTGAAATCGTTCAGGTAGTATCATaGCCTAACTATTCCTGCAGT +
Preference number: 2 (lower is better)
Translates to: FVQLKNGIVVDLWCGTEIVQVVS*PNYSCS
Trigger: ACTGCAGGAATAGTTAGGTCATGATACTACCTGAAC...GATTTCAGTTCCACACCACAAATCCACAACAATGCCATTTTTCAACTGTACAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR GCA 90 bp CATGACCTAACTATTCCTGCAGTAAATTTGCTACATTTGTTAGTCGTTTGTTTCAACAAGACTGATAAATaGCCAGACTTGGCCCAGACA +
Preference number: 2 (lower is better)
Translates to: HDLTIPAVNLLHLLVVCFNKTDK*PDLAQT
Trigger: TGTCTGGGCCAAGTCTGGGCATTTATCAGTCTTGTT...GAAACAAACGACTAACAAATGTAGCAAATTTACTGCAGGAATAGTTAGGTCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR CCA 90 bp CATGACCTAACTATTCCTGCAGTAAATTTGCTACATTTGTTAGTCGTTTGTTTCTTAGTGAAAAGAAACTaGTCAGGGCCAGCAGGTAAG +
Preference number: 2 (lower is better)
Translates to: HDLTIPAVNLLHLLVVCFLVKRN*SGPAGK
Trigger: CTTACCTGCTGGCCCTGACCAGTTTCTTTTCACTAA...GAAACAAACGACTAACAAATGTAGCAAATTTACTGCAGGAATAGTTAGGTCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR TCA 90 bp AAACTAATTTTTGACCTCAGAACCCTTTGTTCAACAGAAATCTCAGGAGGAAGCATACAGTTCATCAACTaGATTACTGGGCCTGTTTAT +
Preference number: 2 (lower is better)
Translates to: KLIFDLRTLCSTEISGGSIQFIN*ITGPVY
Trigger: ATAAACAGGCCCAGTAATTCAGTTGATGAACTGTAT...GCTTCCTCCTGAGATTTCTGTTGAACAAAGGGTTCTGAGGTCAAAAATTAGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR GCA 90 bp TTTGTACAGTTGAAAAATGGCATTGTTGTGGATTTGTGGTGTGGAACTGAAATCAAATTGACTCCAGTCTaGCAGTGTATCACAAGAATC +
Preference number: 2 (lower is better)
Translates to: FVQLKNGIVVDLWCGTEIKLTPV*QCITRI
Trigger: GATTCTTGTGATACACTGGCAGACTGGAGTCAATTT...GATTTCAGTTCCACACCACAAATCCACAACAATGCCATTTTTCAACTGTACAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR CCA 90 bp TTTGTACAGTTGAAAAATGGCATTGTTGTGGATTTGTGGTGTGGAACTGAAATCCTTCTTAAAAAGGTATaGTCTGATGCCCCTGAAATG +
Preference number: 2 (lower is better)
Translates to: FVQLKNGIVVDLWCGTEILLKKV*SDAPEM
Trigger: CATTTCAGGGGCATCAGACCATACCTTTTTAAGAAG...GATTTCAGTTCCACACCACAAATCCACAACAATGCCATTTTTCAACTGTACAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR TCA 90 bp TTTGTACAGTTGAAAAATGGCATTGTTGTGGATTTGTGGTGTGGAACTGAAATCAAAGTGCATGTCACATaGAGTCATTATGGAAAAGAG +
Preference number: 2 (lower is better)
Translates to: FVQLKNGIVVDLWCGTEIKVHVT*SHYGKE
Trigger: CTCTTTTCCATAATGACTTCATGTGACATGCACTTT...GATTTCAGTTCCACACCACAAATCCACAACAATGCCATTTTTCAACTGTACAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR CCA 90 bp TTTGTACAGTTGAAAAATGGCATTGTTGTGGATTTGTGGTGTGGAACTGAAATCTTAGATAATTCAGTCTaGTGGATTACTCAAACCACC +
Preference number: 2 (lower is better)
Translates to: FVQLKNGIVVDLWCGTEILDNSV*WITQTT
Trigger: GGTGGTTTGAGTAATCCACCAGACTGAATTATCTAA...GATTTCAGTTCCACACCACAAATCCACAACAATGCCATTTTTCAACTGTACAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR GCA 90 bp TTTGTACAGTTGAAAAATGGCATTGTTGTGGATTTGTGGTGTGGAACTGAAATCTTCAGATGCGGTGACTaGTGGTTAATTAAACTTTTT +
Preference number: 2 (lower is better)
Translates to: FVQLKNGIVVDLWCGTEIFRCGD*WLIKLF
Trigger: AAAAAGTTTAATTAACCAGCAGTCACCGCATCTGAA...GATTTCAGTTCCACACCACAAATCCACAACAATGCCATTTTTCAACTGTACAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR TCA 72 bp TCTGATGGCAAGGCCCCACAGGGACACTATAGTGGCTaGGCGTACGGTGGGCCTAACGGGGAGGCCACCCAG +
Preference number: 3 (lower is better)
Translates to: SDGKAPQGHYSG*AYGGPNGEATQ
Trigger: CTGGGTGGCCTCCCCGTTAGGCCCACCGTACGCTCAGCCACTATAGTGTCCCTGTGGGGCCTTGCCATCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR GCA 72 bp CGAGAGGGAAGCAAATGGGCCTCCCATAGCACCCTGTaGCCCAACACCCAGAGGAAAGGACCCCGGGGCAGT +
Preference number: 3 (lower is better)
Translates to: REGSKWASHSTL*PNTQRKGPRGS
Trigger: ACTGCCCCGGGGTCCTTTCCTCTGGGTGTTGGGGCACAGGGTGCTATGGGAGGCCCATTTGCTTCCCTCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR CCA 72 bp CACGAGCCACAGAACGGGGACAGTAATGTCACCACCTaGGGCGGAACCAGAGGTGCAGGACTCTGGGGTCCC +
Preference number: 3 (lower is better)
Translates to: HEPQNGDSNVTT*GGTRGAGLWGP
Trigger: GGGACCCCAGAGTCCTGCACCTCTGGTTCCGCCCCAGGTGGTGACATTACTGTCCCCGTTCTGTGGCTCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR CAA 90 bp GGCCTGACCTGTCTGTACTGTGTCTTGACCGCAAAGTCCCACACCAGAACCATGCCCACGGCCCCCGCCTaGCCTACCCTCACGATGAAG +
Preference number: 3 (lower is better)
Translates to: GLTCLYCVLTAKSHTRTMPTAPA*PTLTMK
Trigger: CTTCATCGTGAGGGTAGGCAAGGCGGGGGCCGTGGG...CATGGTTCTGGTGTGGGACTTTGCGGTCAAGACACAGTACAGACAGGTCAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR GCA 72 bp GTATTCAGAGTCAGAATCAGCTGGCACGTGTGGGTATaGCCTCCCCAGGCAGGACTGGTCCCACAGGCTCCT +
Preference number: 3 (lower is better)
Translates to: VFRVRISWHVWV*PPQAGLVPQAP
Trigger: AGGAGCCTGTGGGACCAGTCCTGCCTGGGGAGGGCATACCCACACGTGCCAGCTGATTCTGACTCTGAATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR GCA 72 bp GGCAGGCCTTGGCAGACTCCACCCAGGAAATCCTCTTaGCCTATCTGTGCAGGACAATCCCCTGTGGGCATT +
Preference number: 3 (lower is better)
Translates to: GRPWQTPPRKSS*PICAGQSPVGI
Trigger: AATGCCCACAGGGGATTGTCCTGCACAGATAGGGCAAGAGGATTTCCTGGGTGGAGTCTGCCAAGGCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR GCA 72 bp ACAGCCCACTTGCAGCCCTTGCCCCTGAGCAACTCATaGAAAGAACTCCTGCTGAGGACCAATGGTCCCAGG +
Preference number: 3 (lower is better)
Translates to: TAHLQPLPLSNS*KELLLRTNGPR
Trigger: CCTGGGACCATTGGTCCTCAGCAGGAGTTCTTTGCATGAGTTGCTCAGGGGCAAGGGCTGCAAGTGGGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR GCA 72 bp CTCACTGGGAACACACTGACCTTGTGTCCCATGGTCTaGGGAACAGCAGGTCTACAGGACTGCAGGAGAGCC +
Preference number: 3 (lower is better)
Translates to: LTGNTLTLCPMV*GTAGLQDCRRA
Trigger: GGCTCTCCTGCAGTCCTGTAGACCTGCTGTTCCGCAGACCATGGGACACAAGGTCAGTGTGTTCCCAGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR TCA 72 bp AGCGGGAAAAACGAATCCCAAAGGACAGGAGGTGGCTaGGGCTCTTCAGCATGGCGCTGGTTCTGCATCCAC +
Preference number: 3 (lower is better)
Translates to: SGKNESQRTGGG*GSSAWRWFCIH
Trigger: GTGGATGCAGAACCAGCGCCATGCTGAAGAGCCTCAGCCACCTCCTGTCCTTTGGGATTCGTTTTTCCCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR TCA 72 bp CTTCACTCCCAGACACGCTGCACTAAAAGACTGGCCTaGGTCACGGTGTGCTTCACAGAGGCGCCACAGATC +
Preference number: 3 (lower is better)
Translates to: LHSQTRCTKRLA*VTVCFTEAPQI
Trigger: GATCTGTGGCGCCTCTGTGAAGCACACCGTGACTCAGGCCAGTCTTTTAGTGCAGCGTGTCTGGGAGTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR CAA 90 bp TGGGAACACACTGACCTTGTGTCCCATGGTCTGCGGAACAGCAGGTCTACAGGACAGCCAGGAGCCTGCTaGGATGACAGCACACTAGAA +
Preference number: 3 (lower is better)
Translates to: WEHTDLVSHGLRNSRSTGQPGAC*DDSTLE
Trigger: TTCTAGTGTGCTGTCATCCAAGCAGGCTCCTGGCTG...TCCTGTAGACCTGCTGTTCCGCAGACCATGGGACACAAGGTCAGTGTGTTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR TCA 72 bp AAGATGACTGACTTGGGACCCTCACTGGGAACACACTaGCCTTGTGTCCCATGGTCTGCGGAACAGCAGGTC +
Preference number: 3 (lower is better)
Translates to: KMTDLGPSLGTH*PCVPWSAEQQV
Trigger: GACCTGCTGTTCCGCAGACCATGGGACACAAGGTCAGTGTGTTCCCAGTGAGGGTCCCAAGTCAGTCATCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR GCA 72 bp GCAGACTCCACCCAGGAAATCCTCTTGCCCTATCTGTaGAGGACAATCCCCTGTGGGCATTTCCCTGAACTG +
Preference number: 3 (lower is better)
Translates to: ADSTQEILLPYL*RTIPCGHFPEL
Trigger: CAGTTCAGGGAAATGCCCACAGGGGATTGTCCTGCACAGATAGGGCAAGAGGATTTCCTGGGTGGAGTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR GCA 72 bp ACTGAACATAGCACACTAGGTAGATGCCCAGGCATGTaGAGTGCCCCTCACACTGTGGACTCCAAGACCAGC +
Preference number: 3 (lower is better)
Translates to: TEHSTLGRCPGM*SAPHTVDSKTS
Trigger: GCTGGTCTTGGAGTCCACAGTGTGAGGGGCACTGCACATGCCTGGGCATCTACCTAGTGTGCTATGTTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR CCA 72 bp AAGTCCGGACATGATGTATTCAGAGTCAGAATCAGCTaGCACGTGTGGGTATGCCCTCCCCAGGCAGGACTG +
Preference number: 3 (lower is better)
Translates to: KSGHDVFRVRIS*HVWVCPPQAGL
Trigger: CAGTCCTGCCTGGGGAGGGCATACCCACACGTGCCAGCTGATTCTGACTCTGAATACATCATGTCCGGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR CAA 90 bp CTGGGGGACAGGTCTTCAGCTGGGCCTCAGGACTGGCCATTATGCATACCAGAATGTTCCTGTAACCACTaGGCCAGCCCACATTTTGAC +
Preference number: 3 (lower is better)
Translates to: LGDRSSAGPQDWPLCIPECSCNH*ASPHFD
Trigger: GTCAAAATGTGGGCTGGCCAAGTGGTTACAGGAACA...TTCTGGTATGCATAATGGCCAGTCCTGAGGCCCAGCTGAAGACCTGTCCCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR TCA 72 bp CCAAGGCCCATCCCTACAGCCAGGAGCCTGCTTGGATaGCAGCACACTAGAAAGGAAGAAGCAAGGATCCTT +
Preference number: 3 (lower is better)
Translates to: PRPIPTARSLLG*QHTRKEEARIL
Trigger: AAGGATCCTTGCTTCTTCCTTTCTAGTGTGCTGTCATCCAAGCAGGCTCCTGGCTGTAGGGATGGGCCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR TCA 72 bp GGCCCTAGACAATCCAAAGACACTGCCCTAGAGAAATaGAGGCAGTGCAGGGCCCATCACCACACATTGGCA +
Preference number: 3 (lower is better)
Translates to: GPRQSKDTALEK*RQCRAHHHTLA
Trigger: TGCCAATGTGTGGTGATGGGCCCTGCACTGCCTTCATTTCTCTAGGGCAGTGTCTTTGGATTGTCTAGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR TCA 72 bp CCTCCACAAGGTCCTTCCCCTCAATTCCTGGTTACCTaGGAAGTAGCCTCCATACTAAAGGATGCTGCTCCG +
Preference number: 3 (lower is better)
Translates to: PPQGPSPQFLVT*EVASILKDAAP
Trigger: CGGAGCAGCATCCTTTAGTATGGAGGCTACTTCTCAGGTAACCAGGAATTGAGGGGAAGGACCTTGTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR TCA 72 bp ATATACCACCTGATGGGTGCACTTTACACCACAGCATaGGGGGAAGAGTGGCCTGAAGCCCAAAGAACTGGC +
Preference number: 3 (lower is better)
Translates to: IYHLMGALYTTA*GEEWPEAQRTG
Trigger: GCCAGTTCTTTGGGCTTCAGGCCACTCTTCCCCTCATGCTGTGGTGTAAAGTGCACCCATCAGGTGGTATAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR GCA 72 bp CCTGGTTACCTGAGAAGTAGCCTCCATACTAAAGGATaGTGCTCCGAATGTGCCCGAGTCCAGTGTAGCTCT +
Preference number: 3 (lower is better)
Translates to: PGYLRSSLHTKG*CSECARVQCSS
Trigger: AGAGCTACACTGGACTCGGGCACATTCGGAGCAGCATCCTTTAGTATGGAGGCTACTTCTCAGGTAACCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR CAA 90 bp CTGGGGGACAGGTCTTCAGCTGGGCCTCAGGACTGGCCATTATGCATACCAGAATTGTTGGCAGGCCTTTaGGAGCCACCAATTGTTTTA +
Preference number: 3 (lower is better)
Translates to: LGDRSSAGPQDWPLCIPELLAGL*EPPIVL
Trigger: TAAAACAATTGGTGGCTCCAAAAGGCCTGCCAACAA...TTCTGGTATGCATAATGGCCAGTCCTGAGGCCCAGCTGAAGACCTGTCCCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR CAA 90 bp CTGGGGGACAGGTCTTCAGCTGGGCCTCAGGACTGGCCATTATGCATACCAGAATTTAGTGCCCTGTGGTaGGTTTACAGTAGTTCTCAG +
Preference number: 3 (lower is better)
Translates to: LGDRSSAGPQDWPLCIPEFSALW*VYSSSQ
Trigger: CTGAGAACTACTGTAAACCAACCACAGGGCACTAAA...TTCTGGTATGCATAATGGCCAGTCCTGAGGCCCAGCTGAAGACCTGTCCCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR GCA 72 bp GGTTACCTGAGAAGTAGCCTCCATACTAAAGGATGCTaGTCCGAATGTGCCCGAGTCCAGTGTAGCTCTGTT +
Preference number: 3 (lower is better)
Translates to: GYLRSSLHTKGC*SECARVQCSSV
Trigger: AACAGAGCTACACTGGACTCGGGCACATTCGGAGCAGCATCCTTTAGTATGGAGGCTACTTCTCAGGTAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR GCA 72 bp GCTCAGCAGGGTTCCTGCATGTGTACGTTAAAAGTCTaGAGTATCAAGAGGACCCAGATGGCGACACTGTTC +
Preference number: 3 (lower is better)
Translates to: AQQGSCMCTLKV*SIKRTQMATLF
Trigger: GAACAGTGTCGCCATCTGGGTCCTCTTGATACTGCAGACTTTTAACGTACACATGCAGGAACCCTGCTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR CAA 90 bp CAGGGGATACAGGAAGTACCACAATCAAAAAGTCATGTTTCATTCATACCTGGAGCCCACTTGCAGCCCTaGCCCCTGAGCAACTCATGC +
Preference number: 3 (lower is better)
Translates to: QGIQEVPQSKSHVSFIPGAHLQP*PLSNSC
Trigger: GCATGAGTTGCTCAGGGGCAAGGGCTGCAAGTGGGC...TCCAGGTATGAATGAAACATGACTTTTTGATTGTGGTACTTCCTGTATCCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR TCA 72 bp CTCCTTTTTCTGCAGAAACACCCCCAAGTCCGGACATaGTGTATTCAGAGTCAGAATCAGCTGGCACGTGTG +
Preference number: 3 (lower is better)
Translates to: LLFLQKHPQVRT*CIQSQNQLARV
Trigger: CACACGTGCCAGCTGATTCTGACTCTGAATACATCATGTCCGGACTTGGGGGTGTTTCTGCAGAAAAAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR TCA 72 bp AGGCCCTCTCTCCTCCCAATCCACAAGAAGCTGAGCTaGATATCACTGTCCTACACAACCACAAGTGGAGTT +
Preference number: 3 (lower is better)
Translates to: RPSLLPIHKKLS*ISLSYTTTSGV
Trigger: AACTCCACTTGTGGTTGTGTAGGACAGTGATATTCAGCTCAGCTTCTTGTGGATTGGGAGGAGAGAGGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR TCA 72 bp ATTGCAGGCCCTCTCTCCTCCCAATCCACAAGAAGCTaGGCTGAATATCACTGTCCTACACAACCACAAGTG +
Preference number: 3 (lower is better)
Translates to: IAGPLSSQSTRS*AEYHCPTQPQV
Trigger: CACTTGTGGTTGTGTAGGACAGTGATATTCAGCTCAGCTTCTTGTGGATTGGGAGGAGAGAGGGCCTGCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR TCA 72 bp AGTCCACTGAATGGGGCAGAGAACAAACACTTAAGATaGCTGACTTGGGACCCTCACTGGGAACACACTGAC +
Preference number: 3 (lower is better)
Translates to: SPLNGAENKHLR*LTWDPHWEHTD
Trigger: GTCAGTGTGTTCCCAGTGAGGGTCCCAAGTCAGTCATCTTAAGTGTTTGTTCTCTGCCCCATTCAGTGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR CCA 72 bp AGCTTCTTAAAAAGGTATGGTCTGATGCCCCTGAAATaGGAATCAGGCGTGGCCATCTCTCCAAAGGTGTGC +
Preference number: 3 (lower is better)
Translates to: SFLKRYGLMPLK*ESGVAISPKVC
Trigger: GCACACCTTTGGAGAGATGGCCACGCCTGATTCCCATTTCAGGGGCATCAGACCATACCTTTTTAAGAAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR CCA 72 bp AGAGGACAAAATGTGCCTGGCAGCTCTCCATTTAATTaGATCACTGCATCCACATGCCACCCTCCCCACTTT +
Preference number: 3 (lower is better)
Translates to: RGQNVPGSSPFN*ITASTCHPPHF
Trigger: AAAGTGGGGAGGGTGGCATGTGGATGCAGTGATCCAATTAAATGGAGAGCTGCCAGGCACATTTTGTCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR CAA 90 bp GGCAAAATTCTAGTTTCAAGAGGGCCATCCAATACTCCCACTTTAATGGAACAGCTCCAAACCCCGCTCTaGCTGTTAATGCTCGGCCTC +
Preference number: 3 (lower is better)
Translates to: GKILVSRGPSNTPTLMEQLQTPL*LLMLGL
Trigger: GAGGCCGAGCATTAACAGCAAGAGCGGGGTTTGGAG...CTGTTCCATTAAAGTGGGAGTATTGGATGGCCCTCTTGAAACTAGAATTTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR CAA 90 bp TTTGTACAGTTGAAAAATGGCATTGTTGTGGATTTGTGGTGTGGAACTGAAATCCCAGCGAGGCAGGCCTaGGCAGACTCCACCCAGGAA +
Preference number: 3 (lower is better)
Translates to: FVQLKNGIVVDLWCGTEIPARQA*ADSTQE
Trigger: TTCCTGGGTGGAGTCTGCCAAGGCCTGCCTCGCTGG...GATTTCAGTTCCACACCACAAATCCACAACAATGCCATTTTTCAACTGTACAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR TCA 72 bp CATTCTGACGCAAACATGATTAGGAGAGTCAGGGAATaGGCCCACACTCAACCAACAGAGAAGTTCCCAGGA +
Preference number: 3 (lower is better)
Translates to: HSDANMIRRVRE*AHTQPTEKFPG
Trigger: TCCTGGGAACTTCTCTGTTGGTTGAGTGTGGGCTCATTCCCTGACTCTCCTAATCATGTTTGCGTCAGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR TCA 72 bp AGGAGAGCCCAGGAAGGTAGCCCATGCTCGTATAGCTaGGTTACCACTTTTAATCTTGGTCTGCCATCTATG +
Preference number: 3 (lower is better)
Translates to: RRAQEGSPCSYS*VTTFNLGLPSM
Trigger: CATAGATGGCAGACCAAGATTAAAAGTGGTAACTCAGCTATACGAGCATGGGCTACCTTCCTGGGCTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR GCA 72 bp CAACAAAGGCTAATAATGCTCACCATCTTCCCTCACTaGCAGGTGTCACTTTCTCCTAAGCACAGCCCACTT +
Preference number: 3 (lower is better)
Translates to: QQRLIMLTIFPH*QVSLSPKHSPL
Trigger: AAGTGGGCTGTGCTTAGGAGAAAGTGACACCTGGCAGTGAGGGAAGATGGTGAGCATTATTAGCCTTTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR GCA 72 bp CAACAGAGAAGTTCCCAGGACTCAAGACAGAACTCATaGATTTGCAAGAAGACCCATCCTCACCTGCCTGAA +
Preference number: 3 (lower is better)
Translates to: QQRSSQDSRQNS*ICKKTHPHLPE
Trigger: TTCAGGCAGGTGAGGATGGGTCTTCTTGCAAATGCATGAGTTCTGTCTTGAGTCCTGGGAACTTCTCTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR GCA 72 bp AGAAATCTCAGGAGGAAGCACCAATGTAAAACACATTaGAGGCCCTCTCTCCTCCCAATCCACAAGAAGCTG +
Preference number: 3 (lower is better)
Translates to: RNLRRKHQCKTH*RPSLLPIHKKL
Trigger: CAGCTTCTTGTGGATTGGGAGGAGAGAGGGCCTGCAATGTGTTTTACATTGGTGCTTCCTCCTGAGATTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR TCA 72 bp AAGTCATTATGGAAAAGAGCACAGGCAGAGGCTCTATaGCCCAGTAAATTCAAAGCAGGGCTCGAGATGGCT +
Preference number: 3 (lower is better)
Translates to: KSLWKRAQAEAL*PSKFKAGLEMA
Trigger: AGCCATCTCGAGCCCTGCTTTGAATTTACTGGGTCATAGAGCCTCTGCCTGTGCTCTTTTCCATAATGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR TCA 72 bp GAGGACCCAGATGGCGACACTGTTCAACATGAGGTCTaGGGTAACTGGTTCTTAAAATACCTGGATCACAGA +
Preference number: 3 (lower is better)
Translates to: EDPDGDTVQHEV*GNWFLKYLDHR
Trigger: TCTGTGATCCAGGTATTTTAAGAACCAGTTACCTCAGACCTCATGTTGAACAGTGTCGCCATCTGGGTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR GCA 72 bp AAAGGTGACAGAGCCCAACTACAGGATGAAGTGCTTTaGTGTCTAAGTTATGTCAAGAGGGTTAGCCTAGCC +
Preference number: 3 (lower is better)
Translates to: KGDRAQLQDEVL*CLSYVKRVSLA
Trigger: GGCTAGGCTAACCCTCTTGACATAACTTAGACAGCAAAGCACTTCATCCTGTAGTTGGGCTCTGTCACCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR GCA 72 bp TGCTTTAAAACAAGTGCCCACGCTCAGCAGGGTTCCTaGATGTGTACGTTAAAAGTCTGCAGTATCAAGAGG +
Preference number: 3 (lower is better)
Translates to: CFKTSAHAQQGS*MCTLKVCSIKR
Trigger: CCTCTTGATACTGCAGACTTTTAACGTACACATGCAGGAACCCTGCTGAGCGTGGGCACTTGTTTTAAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR CCA 72 bp CGGAGAAATTATTTGGCTAAACACACACTTAACTCGTaGCAGTGCTCTGAGAAAACCCCACTCGGGCTAAAG +
Preference number: 3 (lower is better)
Translates to: RRNYLAKHTLNS*QCSEKTPLGLK
Trigger: CTTTAGCCCGAGTGGGGTTTTCTCAGAGCACTGCCACGAGTTAAGTGTGTGTTTAGCCAAATAATTTCTCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR TCA 72 bp ACCAATTATCTGAGCCCACCAAAAGTGCATGTCACATaGAGTCATTATGGAAAAGAGCACAGGCAGAGGCTC +
Preference number: 3 (lower is better)
Translates to: TNYLSPPKVHVT*SHYGKEHRQRL
Trigger: GAGCCTCTGCCTGTGCTCTTTTCCATAATGACTTCATGTGACATGCACTTTTGGTGGGCTCAGATAATTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR TCA 72 bp AGCAAGAGTCTCTATCCTCCTGAAGATGTTCAAGGCTaGAAAACAACCTCCTTTTTCTGCAGAAACACCCCC +
Preference number: 3 (lower is better)
Translates to: SKSLYPPEDVQG*KTTSFFCRNTP
Trigger: GGGGGTGTTTCTGCAGAAAAAGGAGGTTGTTTTTCAGCCTTGAACATCTTCAGGAGGATAGAGACTCTTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR GCA 72 bp GGCAGCTCTCCATTTAATTGGATCACTGCATCCACATaGCACCCTCCCCACTTTTCTGAACAATTACTTAAC +
Preference number: 3 (lower is better)
Translates to: GSSPFNWITAST*HPPHFSEQLLN
Trigger: GTTAAGTAATTGTTCAGAAAAGTGGGGAGGGTGGCATGTGGATGCAGTGATCCAATTAAATGGAGAGCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR GCA 72 bp GCTGAGTTACCACTTTTAATCTTGGTCTGCCATCTATaGCCCAGAGACAAAAATTCAGATGCGGTGACTGCT +
Preference number: 3 (lower is better)
Translates to: AELPLLILVCHL*PRDKNSDAVTA
Trigger: AGCAGTCACCGCATCTGAATTTTTGTCTCTGGGGCATAGATGGCAGACCAAGATTAAAAGTGGTAACTCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR GCA 72 bp AATTATTTGGCTAAACACACACTTAACTCGTGGCAGTaGTCTGAGAAAACCCCACTCGGGCTAAAGCACTTG +
Preference number: 3 (lower is better)
Translates to: NYLAKHTLNSWQ*SEKTPLGLKHL
Trigger: CAAGTGCTTTAGCCCGAGTGGGGTTTTCTCAGAGCACTGCCACGAGTTAAGTGTGTGTTTAGCCAAATAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR CCA 72 bp AACATAGCTTACCGAAACCCTGTTCCTGTAACCACTTaGCCAGCCCACATTTTGACCCATGAAGCAAAAACT +
Preference number: 3 (lower is better)
Translates to: NIAYRNPVPVTT*PAHILTHEAKT
Trigger: AGTTTTTGCTTCATGGGTCAAAATGTGGGCTGGCCAAGTGGTTACAGGAACAGGGTTTCGGTAAGCTATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR CAA 90 bp AAACTAATTTTTGACCTCAGAACCCTTTGTTCAACAGAAATCTCAGGAGGAAGCTGTCTGTACTGTGTCTaGACCGCAAAGTCCCACACC +
Preference number: 3 (lower is better)
Translates to: KLIFDLRTLCSTEISGGSCLYCV*TAKSHT
Trigger: GGTGTGGGACTTTGCGGTCAAGACACAGTACAGACA...GCTTCCTCCTGAGATTTCTGTTGAACAAAGGGTTCTGAGGTCAAAAATTAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR TCA 72 bp TCTCTTTTTGGCTGTTCGCCCAGGATGAAGGGTAGATaGCTAGATTCACGGAGCTTCTTAAAAAGGTATGGT +
Preference number: 3 (lower is better)
Translates to: SLFGCSPRMKGR*LDSRSFLKRYG
Trigger: ACCATACCTTTTTAAGAAGCTCCGTGAATCTAGTCATCTACCCTTCATCCTGGGCGAACAGCCAAAAAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR TCA 72 bp TCACTGGCAGTCTTAACATTTTCAGATGAGGTCTCCTaGAGAATCTCTAATAATCACTTGCTCCCAGTCGGC +
Preference number: 3 (lower is better)
Translates to: SLAVLTFSDEVS*RISNNHLLPVG
Trigger: GCCGACTGGGAGCAAGTGATTATTAGAGATTCTTCAGGAGACCTCATCTGAAAATGTTAAGACTGCCAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR GCA 72 bp AACCCCTTCCATACACACAAAGAGTGGTGTGTACATTaGTTTAGTGCCCTGTGGTTGGTTTACAGTAGTTCT +
Preference number: 3 (lower is better)
Translates to: NPFHTHKEWCVH*FSALWLVYSSS
Trigger: AGAACTACTGTAAACCAACCACAGGGCACTAAAGCAATGTACACACCACTCTTTGTGTGTATGGAAGGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR CAA 90 bp AAAATGAAGACCACTTTCCGTATTGTGGCAGTGATGCTGAGCTTCCTCAGAAAAGAGAGACCCTTCCCTTaGCTAAGAATATGTGAGCAA +
Preference number: 3 (lower is better)
Translates to: KMKTTFRIVAVMLSFLRKERPFP*LRICEQ
Trigger: TTGCTCACATATTCTTAGCAAAGGGAAGGGTCTCTC...TTTTCTGAGGAAGCTCAGCATCACTGCCACAATACGGAAAGTGGTCTTCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR CAA 90 bp AAAATGAAGACCACTTTCCGTATTGTGGCAGTGATGCTGAGCTTCCTCAGAAAAGCCCATCACCACACATaGGCATTTAGAGAATATGTG +
Preference number: 3 (lower is better)
Translates to: KMKTTFRIVAVMLSFLRKAHHHT*AFREYV
Trigger: CACATATTCTCTAAATGCCAATGTGTGGTGATGGGC...TTTTCTGAGGAAGCTCAGCATCACTGCCACAATACGGAAAGTGGTCTTCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR TCA 72 bp GTTCCACACCACTCATGCTCCAGTGTACGTTTCTCTTaGAAGGTAAAGCTCATTAGCTCTGATTACAAAATC +
Preference number: 3 (lower is better)
Translates to: VPHHSCSSVRFS*KVKLISSDYKI
Trigger: GATTTTGTAATCAGAGCTAATGAGCTTTACCTTTCAAGAGAAACGTACACTGGAGCATGAGTGGTGTGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR-3UTR CAA 90 bp AAAATGAAGACCACTTTCCGTATTGTGGCAGTGATGCTGAGCTTCCTCAGAAAAGTCCCACTAGATAATTaGGACTTTTCTTTGTTGGCA +
Preference number: 3 (lower is better)
Translates to: KMKTTFRIVAVMLSFLRKVPLDN*DFSLLA
Trigger: TGCCAACAAAGAAAAGTCCAAATTATCTAGTGGGAC...TTTTCTGAGGAAGCTCAGCATCACTGCCACAATACGGAAAGTGGTCTTCATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR TCA 72 bp TCTTTTATTTACAATGCTAACATTCTGACGCAAACATaGTTAGGAGAGTCAGGGAATGAGCCCACACTCAAC +
Preference number: 3 (lower is better)
Translates to: SFIYNANILTQT*LGESGNEPTLN
Trigger: GTTGAGTGTGGGCTCATTCCCTGACTCTCCTAATCATGTTTGCGTCAGAATGTTAGCATTGTAAATAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR TCA 72 bp ACAAAGAGGCTGGGGTTTAGTGTTCAGGTAGTATCATaGCCTAACTATTCCTGCAGTAAATTTGCTACATTT +
Preference number: 3 (lower is better)
Translates to: TKRLGFSVQVVS*PNYSCSKFATF
Trigger: AAATGTAGCAAATTTACTGCAGGAATAGTTAGGTCATGATACTACCTGAACACTAAACCCCAGCCTCTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR TCA 72 bp TCAATTACTGAGGAAAAATCACTTCGGTTACCTCTATaGGCTGCCATAGGAGCAAATAAAGTATCACTGGTT +
Preference number: 3 (lower is better)
Translates to: SITEEKSLRLPL*AAIGANKVSLV
Trigger: AACCAGTGATACTTTATTTGCTCCTATGGCAGCTCATAGAGGTAACCGAAGTGATTTTTCCTCAGTAATTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR GCA 72 bp AAATGTGTTACAAAGAGCTTATCTTTGGAACTAATTTaGGTGCAAGACCAGCCAATTAAATCGCTTTGCCTA +
Preference number: 3 (lower is better)
Translates to: KCVTKSLSLELI*VQDQPIKSLCL
Trigger: TAGGCAAAGCGATTTAATTGGCTGGTCTTGCACGCAAATTAGTTCCAAAGATAAGCTCTTTGTAACACATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR CCA 72 bp AACCTGGATAATGTGATCTTAGATAATTCAGTCTGGTaGATTACTCAAACCACCAGATTCTCATTTCAAAGT +
Preference number: 3 (lower is better)
Translates to: NLDNVILDNSVW*ITQTTRFSFQS
Trigger: ACTTTGAAATGAGAATCTGGTGGTTTGAGTAATCCACCAGACTGAATTATCTAAGATCACATTATCCAGGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp GAAAAGGCACGCAGGCCTGACCTGTCTGTACTGTGTCTTGACCGCAAAGTCCCAGTCCAAAATGGCTCCTaGGCGGCGGCCACGGAGCCG +
Preference number: 4 (lower is better)
Translates to: EKARRPDLSVLCLDRKVPVQNGS*AAATEP
Trigger: CGGCTCCGTGGCCGCCGCTCAGGAGCCATTTTGGAC...TGGGACTTTGCGGTCAAGACACAGTACAGACAGGTCAGGCCTGCGTGCCTTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp TGGGAACACACTGACCTTGTGTCCCATGGTCTGCGGAACAGCAGGTCTACAGGACGCTCCAGGCCGCTCTaGTTGGTGCGCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: WEHTDLVSHGLRNSRSTGRSRPL*LVRSSS
Trigger: GGAGCTGGAGCGCACCAACCAGAGCGGCCTGGAGCG...TCCTGTAGACCTGCTGTTCCGCAGACCATGGGACACAAGGTCAGTGTGTTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp TGGGAACACACTGACCTTGTGTCCCATGGTCTGCGGAACAGCAGGTCTACAGGAAGGCCAGCAGGACGATaGGGGAAAGGCCCCCGATGG +
Preference number: 4 (lower is better)
Translates to: WEHTDLVSHGLRNSRSTGRPAGR*GKGPRW
Trigger: CCATCGGGGGCCTTTCCCTCATCGTCCTGCTGGCCT...TCCTGTAGACCTGCTGTTCCGCAGACCATGGGACACAAGGTCAGTGTGTTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp TGGGAACACACTGACCTTGTGTCCCATGGTCTGCGGAACAGCAGGTCTACAGGAGGCCGCTCTGGTTGGTaGGCTCCAGCTCCCAGTTGG +
Preference number: 4 (lower is better)
Translates to: WEHTDLVSHGLRNSRSTGGRSGW*APAPSW
Trigger: CCAACTGGGAGCTGGAGCGCACCAACCAGAGCGGCC...TCCTGTAGACCTGCTGTTCCGCAGACCATGGGACACAAGGTCAGTGTGTTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp CTGGGGGACAGGTCTTCAGCTGGGCCTCAGGACTGGCCATTATGCATACCAGAATGGCACGTGTGGGTATaGCCTCCCCAGGCAGGACTG +
Preference number: 4 (lower is better)
Translates to: LGDRSSAGPQDWPLCIPEWHVWV*PPQAGL
Trigger: CAGTCCTGCCTGGGGAGGGCATACCCACACGTGCCA...TTCTGGTATGCATAATGGCCAGTCCTGAGGCCCAGCTGAAGACCTGTCCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp TCTTGCCCTATCTGTGCAGGACAATCCCCTGTGGGCATTTCCCTGAACTGCTCCCTCCCCAGGCAGGACTaGTCCCACAGGCTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: SCPICAGQSPVGISLNCSLPRQD*SHRLLS
Trigger: GGAGAGGAGCCTGTGGGACCAGTCCTGCCTGGGGAG...GGAGCAGTTCAGGGAAATGCCCACAGGGGATTGTCCTGCACAGATAGGGCAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp CTCCTAGACCCATGCCCTATAAGGAGATCCCCCACCTTCTTCTTGCCATCAGAATCCCTGCGCGCTTCCTaGGCCTTCGTCCCCGAGCAG +
Preference number: 4 (lower is better)
Translates to: LLDPCPIRRSPTFFLPSESLRAS*AFVPEQ
Trigger: CTGCTCGGGGACGAAGGCGCAGGAAGCGCGCAGGGA...TTCTGATGGCAAGAAGAAGGTGGGGGATCTCCTTATAGGGCATGGGTCTAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp GAAAAGGCACGCAGGCCTGACCTGTCTGTACTGTGTCTTGACCGCAAAGTCCCATTCGGTCTCGTTCCCTaGGCGCTTCCTGCGCCTTCG +
Preference number: 4 (lower is better)
Translates to: EKARRPDLSVLCLDRKVPFGLVP*ALPAPS
Trigger: CGAAGGCGCAGGAAGCGCGCAGGGAACGAGACCGAA...TGGGACTTTGCGGTCAAGACACAGTACAGACAGGTCAGGCCTGCGTGCCTTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp CTGGGGGACAGGTCTTCAGCTGGGCCTCAGGACTGGCCATTATGCATACCAGAATGGTGCCAGAGCTGTTaGGCCAGGAGGCGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: LGDRSSAGPQDWPLCIPEWCQSC*ARRRSS
Trigger: ACTGCTACGCCTCCTGGCGCAACAGCTCTGGCACCA...TTCTGGTATGCATAATGGCCAGTCCTGAGGCCCAGCTGAAGACCTGTCCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp CTGGGGGACAGGTCTTCAGCTGGGCCTCAGGACTGGCCATTATGCATACCAGAATGCACCACCACCTCCTaGAGCTCCTCCAACGAAGGG +
Preference number: 4 (lower is better)
Translates to: LGDRSSAGPQDWPLCIPECTTTS*SSSNEG
Trigger: CCCTTCGTTGGAGGAGCTGCAGGAGGTGGTGGTGCA...TTCTGGTATGCATAATGGCCAGTCCTGAGGCCCAGCTGAAGACCTGTCCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp AGGGCTGCACCCAATCTCAGACTTTCTCCAAACCCCGCTCTTGCTGTTAATGCTGGGGGCTGTCGGGGGTaGCTCGTACGTGACTTCCGG +
Preference number: 4 (lower is better)
Translates to: RAAPNLRLSPNPALAVNAGGCRG*LVRDFR
Trigger: CCGGAAGTCACGTACGAGCCACCCCCGACAGCCCCC...AGCATTAACAGCAAGAGCGGGGTTTGGAGAAAGTCTGAGATTGGGTGCAGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp TGGGAACACACTGACCTTGTGTCCCATGGTCTGCGGAACAGCAGGTCTACAGGAGGGAAAGGCCCCCGATaGGCAGCAGTGAGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: WEHTDLVSHGLRNSRSTGGKGPR*AAVSRP
Trigger: TGGCCTACTCACTGCTGCCCATCGGGGGCCTTTCCC...TCCTGTAGACCTGCTGTTCCGCAGACCATGGGACACAAGGTCAGTGTGTTCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp CTCCTAGACCCATGCCCTATAAGGAGATCCCCCACCTTCTTCTTGCCATCAGAAAGCGCCCCCGAGCCTTaGTCTCCAGCAGCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: LLDPCPIRRSPTFFLPSESAPEP*SPAAAV
Trigger: CACTGCAGCTGCTGGAGATCAAGGCTCGGGGGCGCT...TTCTGATGGCAAGAAGAAGGTGGGGGATCTCCTTATAGGGCATGGGTCTAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp CTGGGGGACAGGTCTTCAGCTGGGCCTCAGGACTGGCCATTATGCATACCAGAACAGCCAGCACGGCTGTaGGGTCGCTCTTCAGCAATA +
Preference number: 4 (lower is better)
Translates to: LGDRSSAGPQDWPLCIPEQPARL*GRSSAI
Trigger: TATTGCTGAAGAGCGACCTCACAGCCGTGCTGGCTG...TTCTGGTATGCATAATGGCCAGTCCTGAGGCCCAGCTGAAGACCTGTCCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp TCTTGCCCTATCTGTGCAGGACAATCCCCTGTGGGCATTTCCCTGAACTGCTCCCCCACCACAATGCCATaGCGAGCTTGCCAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: SCPICAGQSPVGISLNCSPTTMP*RACQKP
Trigger: GGGCTTCTGGCAAGCTCGTCATGGCATTGTGGTGGG...GGAGCAGTTCAGGGAAATGCCCACAGGGGATTGTCCTGCACAGATAGGGCAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp TGGGAACACACTGACCTTGTGTCCCATGGTCTGCGGAACAGCAGGTCTACAGGACTCGTGGCAGTGCTCTaGGAAAACCCCACTCGGGCT +
Preference number: 4 (lower is better)
Translates to: WEHTDLVSHGLRNSRSTGLVAVL*ENPTRA
Trigger: AGCCCGAGTGGGGTTTTCTCAGAGCACTGCCACGAG...TCCTGTAGACCTGCTGTTCCGCAGACCATGGGACACAAGGTCAGTGTGTTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp AGGGCTGCACCCAATCTCAGACTTTCTCCAAACCCCGCTCTTGCTGTTAATGCTTGCAGCCGCTTGTCCTaGTCGCCTTCGCAGCGCTCC +
Preference number: 4 (lower is better)
Translates to: RAAPNLRLSPNPALAVNACSRLS*SPSQRS
Trigger: GGAGCGCTGCGAAGGCGAGCAGGACAAGCGGCTGCA...AGCATTAACAGCAAGAGCGGGGTTTGGAGAAAGTCTGAGATTGGGTGCAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp GGCCTGACCTGTCTGTACTGTGTCTTGACCGCAAAGTCCCACACCAGAACCATGTCACGAGCTCGATGGTaGCAGAGCTGTTGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: GLTCLYCVLTAKSHTRTMSRARW*QSCCAR
Trigger: CCTGGCGCAACAGCTCTGGCACCATCGAGCTCGTGA...CATGGTTCTGGTGTGGGACTTTGCGGTCAAGACACAGTACAGACAGGTCAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp TCTTGCCCTATCTGTGCAGGACAATCCCCTGTGGGCATTTCCCTGAACTGCTCCCCCAGGCATGTGCAGTaGCCCTCACACTGTGGACTC +
Preference number: 4 (lower is better)
Translates to: SCPICAGQSPVGISLNCSPRHVQ*PSHCGL
Trigger: GAGTCCACAGTGTGAGGGGCACTGCACATGCCTGGG...GGAGCAGTTCAGGGAAATGCCCACAGGGGATTGTCCTGCACAGATAGGGCAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp CTGGGGGACAGGTCTTCAGCTGGGCCTCAGGACTGGCCATTATGCATACCAGAAGGGGGTTCTCCTCAGTaGCCACACACTCCTGCCTAT +
Preference number: 4 (lower is better)
Translates to: LGDRSSAGPQDWPLCIPEGGSPQ*PHTPAY
Trigger: ATAGGCAGGAGTGTGTGGCCACTGAGGAGAACCCCC...TTCTGGTATGCATAATGGCCAGTCCTGAGGCCCAGCTGAAGACCTGTCCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp AGGGCTGCACCCAATCTCAGACTTTCTCCAAACCCCGCTCTTGCTGTTAATGCTCCAGCGGGCAGGGTCTaGGGGACAGGTCTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: RAAPNLRLSPNPALAVNAPAGRV*GTGLQL
Trigger: CAGCTGAAGACCTGTCCCCCAGACCCTGCCCGCTGG...AGCATTAACAGCAAGAGCGGGGTTTGGAGAAAGTCTGAGATTGGGTGCAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp TGGGAACACACTGACCTTGTGTCCCATGGTCTGCGGAACAGCAGGTCTACAGGACCATGTACCGTCTCGTaGCTACCTGTCCGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: WEHTDLVSHGLRNSRSTGPCTVS*LPVRGC
Trigger: ACACCCACGGACAGGTAGGCACGAGACGGTACATGG...TCCTGTAGACCTGCTGTTCCGCAGACCATGGGACACAAGGTCAGTGTGTTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp CTGGGGGACAGGTCTTCAGCTGGGCCTCAGGACTGGCCATTATGCATACCAGAACTCTTGCCCTATCTGTaGAGGACAATCCCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: LGDRSSAGPQDWPLCIPELLPYL*RTIPCG
Trigger: CCCACAGGGGATTGTCCTGCACAGATAGGGCAAGAG...TTCTGGTATGCATAATGGCCAGTCCTGAGGCCCAGCTGAAGACCTGTCCCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp CTGGGGGACAGGTCTTCAGCTGGGCCTCAGGACTGGCCATTATGCATACCAGAAAGCACACTAGGTAGATaGCCAGGCATGTGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: LGDRSSAGPQDWPLCIPESTLGR*PGMCSA
Trigger: GGCACTGCACATGCCTGGGCATCTACCTAGTGTGCT...TTCTGGTATGCATAATGGCCAGTCCTGAGGCCCAGCTGAAGACCTGTCCCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp TGGGAACACACTGACCTTGTGTCCCATGGTCTGCGGAACAGCAGGTCTACAGGATCTTCACGAGCTCGATaGTGCCAGAGCTGTTGCGCC +
Preference number: 4 (lower is better)
Translates to: WEHTDLVSHGLRNSRSTGSSRAR*CQSCCA
Trigger: GGCGCAACAGCTCTGGCACCATCGAGCTCGTGAAGA...TCCTGTAGACCTGCTGTTCCGCAGACCATGGGACACAAGGTCAGTGTGTTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp TGGGAACACACTGACCTTGTGTCCCATGGTCTGCGGAACAGCAGGTCTACAGGAGCTCTACTTCGAGGTTaGAGCCTCGCTTCTCGGCAG +
Preference number: 4 (lower is better)
Translates to: WEHTDLVSHGLRNSRSTGALLRG*SLASRQ
Trigger: CTGCCGAGAAGCGAGGCTCCAACCTCGAAGTAGAGC...TCCTGTAGACCTGCTGTTCCGCAGACCATGGGACACAAGGTCAGTGTGTTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp GGCCTGACCTGTCTGTACTGTGTCTTGACCGCAAAGTCCCACACCAGAACCATGCCCAGCACTCCTCGATaGTCACACAAAGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: GLTCLYCVLTAKSHTRTMPSTPR*SHKAGP
Trigger: TGGCCCAGCTTTGTGTGACCATCGAGGAGTGCTGGG...CATGGTTCTGGTGTGGGACTTTGCGGTCAAGACACAGTACAGACAGGTCAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp GGCCTGACCTGTCTGTACTGTGTCTTGACCGCAAAGTCCCACACCAGAACCATGGTGCCCCTCACACTGTaGACTCCAAGACCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: GLTCLYCVLTAKSHTRTMVPLTL*TPRPAR
Trigger: CCTTGCTGGTCTTGGAGTCCACAGTGTGAGGGGCAC...CATGGTTCTGGTGTGGGACTTTGCGGTCAAGACACAGTACAGACAGGTCAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp TGGGAACACACTGACCTTGTGTCCCATGGTCTGCGGAACAGCAGGTCTACAGGACCCAAAGAACTGGCATaGACCACACTCCTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: WEHTDLVSHGLRNSRSTGPKELA*TTLLPS
Trigger: GCTGGGGAGGAGTGTGGTCCATGCCAGTTCTTTGGG...TCCTGTAGACCTGCTGTTCCGCAGACCATGGGACACAAGGTCAGTGTGTTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp GGCCTGACCTGTCTGTACTGTGTCTTGACCGCAAAGTCCCACACCAGAACCATGCCAGCCTCTGGCAAATaGGTGAAGCGTTCGTTGCAG +
Preference number: 4 (lower is better)
Translates to: GLTCLYCVLTAKSHTRTMPASGK*VKRSLQ
Trigger: CTGCAACGAACGCTTCACTCATTTGCCAGAGGCTGG...CATGGTTCTGGTGTGGGACTTTGCGGTCAAGACACAGTACAGACAGGTCAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp TGGGAACACACTGACCTTGTGTCCCATGGTCTGCGGAACAGCAGGTCTACAGGAGCAAAGAACTCCTGCTaGGGACCAATGGTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: WEHTDLVSHGLRNSRSTGAKNSC*GPMVPG
Trigger: TCCTGGGACCATTGGTCCTCAGCAGGAGTTCTTTGC...TCCTGTAGACCTGCTGTTCCGCAGACCATGGGACACAAGGTCAGTGTGTTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp AAAATGAAGACCACTTTCCGTATTGTGGCAGTGATGCTGAGCTTCCTCAGAAAAGGGCCAGGCGGCGGCTaGGCTCTCCTTCCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: KMKTTFRIVAVMLSFLRKGPGGG*ALLPAP
Trigger: AGGAGCGGGAAGGAGAGCGCAGCCGCCGCCTGGCCC...TTTTCTGAGGAAGCTCAGCATCACTGCCACAATACGGAAAGTGGTCTTCATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp CTGGGGGACAGGTCTTCAGCTGGGCCTCAGGACTGGCCATTATGCATACCAGAATGGCGTTGTAGTAGATaGACTCCCGTGTCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: LGDRSSAGPQDWPLCIPEWRCSR*TPVSQP
Trigger: AGGCTGAGACACGGGAGTGCATCTACTACAACGCCA...TTCTGGTATGCATAATGGCCAGTCCTGAGGCCCAGCTGAAGACCTGTCCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp AGGGCTGCACCCAATCTCAGACTTTCTCCAAACCCCGCTCTTGCTGTTAATGCTGTCCGTCTGCAGCCTTaGAGCGAGACACAAGCTCCC +
Preference number: 4 (lower is better)
Translates to: RAAPNLRLSPNPALAVNAVRLQP*SETQAP
Trigger: GGGAGCTTGTGTCTCGCTGCAAGGCTGCAGACGGAC...AGCATTAACAGCAAGAGCGGGGTTTGGAGAAAGTCTGAGATTGGGTGCAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp CTCCTAGACCCATGCCCTATAAGGAGATCCCCCACCTTCTTCTTGCCATCAGAAATCCACGGGTCCGTCTaGAGCCTTGCAGCGAGACAC +
Preference number: 4 (lower is better)
Translates to: LLDPCPIRRSPTFFLPSEIHGSV*SLAARH
Trigger: GTGTCTCGCTGCAAGGCTGCAGACGGACCCGTGGAT...TTCTGATGGCAAGAAGAAGGTGGGGGATCTCCTTATAGGGCATGGGTCTAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp GGGATTCTCTTGATAAAACTATCCCGTCCAGTGCACCTCTGTCTAGAAGCAGCAGGGCGGAACCAGAGGTaGAGGACTCTGGGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: GILLIKLSRPVHLCLEAAGRNQR*RTLGSP
Trigger: TGGGGACCCCAGAGTCCTGCACCTCTGGTTCCGCCC...TGCTGCTTCTAGACAGAGGTGCACTGGACGGGATAGTTTTATCAAGAGAATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp AGGGCTGCACCCAATCTCAGACTTTCTCCAAACCCCGCTCTTGCTGTTAATGCTCGGGCCCCCAGCCTCTaGCAAATGAGTGAAGCGTTC +
Preference number: 4 (lower is better)
Translates to: RAAPNLRLSPNPALAVNARAPSL*QMSEAF
Trigger: GAACGCTTCACTCATTTGCCAGAGGCTGGGGGCCCG...AGCATTAACAGCAAGAGCGGGGTTTGGAGAAAGTCTGAGATTGGGTGCAGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR CAA 72 bp CTGCACCCAATCTCAGACTTTCTCCAAACCCCGCTCTaGCTGTTAATGCTCGGCCTCCACAAGGTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: LHPISDFLQTPL*LLMLGLHKVLP
Trigger: GGGAAGGACCTTGTGGAGGCCGAGCATTAACAGCAAGAGCGGGGTTTGGAGAAAGTCTGAGATTGGGTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR CAA 72 bp CTTCCCCAAGGCCCATCCCTACAGCCAGGAGCCTGCTaGGATGACAGCACACTAGAAAGGAAGAAGCAAGGA +
Preference number: 4 (lower is better)
Translates to: LPQGPSLQPGAC*DDSTLERKKQG
Trigger: TCCTTGCTTCTTCCTTTCTAGTGTGCTGTCATCCAAGCAGGCTCCTGGCTGTAGGGATGGGCCTTGGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp GAAAAGGCACGCAGGCCTGACCTGTCTGTACTGTGTCTTGACCGCAAAGTCCCAGCCTATCGTAGCAGTTaGAGTCATCTAGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: EKARRPDLSVLCLDRKVPAYRSS*SHLASS
Trigger: GCTGCTGGCTAGATGACTTCAACTGCTACGATAGGC...TGGGACTTTGCGGTCAAGACACAGTACAGACAGGTCAGGCCTGCGTGCCTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp TGGGAACACACTGACCTTGTGTCCCATGGTCTGCGGAACAGCAGGTCTACAGGATCATGCCAGGTGTGCTaGAGATCTCCCGTTCACTCT +
Preference number: 4 (lower is better)
Translates to: WEHTDLVSHGLRNSRSTGSCQVC*RSPVHS
Trigger: AGAGTGAACGGGAGATCTTCAGCACACCTGGCATGA...TCCTGTAGACCTGCTGTTCCGCAGACCATGGGACACAAGGTCAGTGTGTTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp CTGGGGGACAGGTCTTCAGCTGGGCCTCAGGACTGGCCATTATGCATACCAGAAGGGTGTTTCAACCAGTaGTCTTTAATGGTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: LGDRSSAGPQDWPLCIPEGCFNQ*SLMVGL
Trigger: GAGGCCCACCATTAAAGATCACTGGTTGAAACACCC...TTCTGGTATGCATAATGGCCAGTCCTGAGGCCCAGCTGAAGACCTGTCCCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp TCTTGCCCTATCTGTGCAGGACAATCCCCTGTGGGCATTTCCCTGAACTGCTCCCTGTGGGCATTTCCCTaGACTGCTCCAAGAGGAAAC +
Preference number: 4 (lower is better)
Translates to: SCPICAGQSPVGISLNCSLWAFP*TAPRGN
Trigger: GTTTCCTCTTGGAGCAGTTCAGGGAAATGCCCACAG...GGAGCAGTTCAGGGAAATGCCCACAGGGGATTGTCCTGCACAGATAGGGCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp GAAAAGGCACGCAGGCCTGACCTGTCTGTACTGTGTCTTGACCGCAAAGTCCCAGCTGATTCCACAGATTaGAGCAGCGAGCCAACCCAA +
Preference number: 4 (lower is better)
Translates to: EKARRPDLSVLCLDRKVPADSTD*SSEPTQ
Trigger: TTGGGTTGGCTCGCTGCTTCAATCTGTGGAATCAGC...TGGGACTTTGCGGTCAAGACACAGTACAGACAGGTCAGGCCTGCGTGCCTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp TCTTGCCCTATCTGTGCAGGACAATCCCCTGTGGGCATTTCCCTGAACTGCTCCTCCTCCAACGAAGGGTaGTGGCCAATCTCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: SCPICAGQSPVGISLNCSSSNEG*WPISSS
Trigger: TGAGGAAGAGATTGGCCAGCACCCTTCGTTGGAGGA...GGAGCAGTTCAGGGAAATGCCCACAGGGGATTGTCCTGCACAGATAGGGCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp TGGGAACACACTGACCTTGTGTCCCATGGTCTGCGGAACAGCAGGTCTACAGGACTACAGCCAGGAGCCTaGTTGGATGACAGCACACTA +
Preference number: 4 (lower is better)
Translates to: WEHTDLVSHGLRNSRSTGLQPGA*LDDSTL
Trigger: TAGTGTGCTGTCATCCAAGCAGGCTCCTGGCTGTAG...TCCTGTAGACCTGCTGTTCCGCAGACCATGGGACACAAGGTCAGTGTGTTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp GAAAAGGCACGCAGGCCTGACCTGTCTGTACTGTGTCTTGACCGCAAAGTCCCACCCCTGAGCAACTCATaGAAAGAACTCCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: EKARRPDLSVLCLDRKVPPLSNS*KELLLR
Trigger: CCTCAGCAGGAGTTCTTTGCATGAGTTGCTCAGGGG...TGGGACTTTGCGGTCAAGACACAGTACAGACAGGTCAGGCCTGCGTGCCTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp TGGGAACACACTGACCTTGTGTCCCATGGTCTGCGGAACAGCAGGTCTACAGGATTGTGTCCCATGGTCTaGGGAACAGCAGGTCTACAG +
Preference number: 4 (lower is better)
Translates to: WEHTDLVSHGLRNSRSTGLCPMV*GTAGLQ
Trigger: CTGTAGACCTGCTGTTCCGCAGACCATGGGACACAA...TCCTGTAGACCTGCTGTTCCGCAGACCATGGGACACAAGGTCAGTGTGTTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp GGGATTCTCTTGATAAAACTATCCCGTCCAGTGCACCTCTGTCTAGAAGCAGCACAGAGGGGATGGTGGTaGAGGCCCAGGGTCCTCATG +
Preference number: 4 (lower is better)
Translates to: GILLIKLSRPVHLCLEAAQRGWW*RPRVLM
Trigger: CATGAGGACCCTGGGCCTCCACCACCATCCCCTCTG...TGCTGCTTCTAGACAGAGGTGCACTGGACGGGATAGTTTTATCAAGAGAATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp GAAAAGGCACGCAGGCCTGACCTGTCTGTACTGTGTCTTGACCGCAAAGTCCCAAGGAAGGCATCTCTCTaGAAGTTGATGGCTCCCTCG +
Preference number: 4 (lower is better)
Translates to: EKARRPDLSVLCLDRKVPRKASL*KLMAPS
Trigger: CGAGGGAGCCATCAACTTCCAGAGAGATGCCTTCCT...TGGGACTTTGCGGTCAAGACACAGTACAGACAGGTCAGGCCTGCGTGCCTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp CTCCTAGACCCATGCCCTATAAGGAGATCCCCCACCTTCTTCTTGCCATCAGAAGGACAGGTCTTCAGCTaGGCCTCAGGACTGGCCATT +
Preference number: 4 (lower is better)
Translates to: LLDPCPIRRSPTFFLPSEGQVFS*ASGLAI
Trigger: AATGGCCAGTCCTGAGGCCCAGCTGAAGACCTGTCC...TTCTGATGGCAAGAAGAAGGTGGGGGATCTCCTTATAGGGCATGGGTCTAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp TGGGAACACACTGACCTTGTGTCCCATGGTCTGCGGAACAGCAGGTCTACAGGAACTTGGGACCCTCACTaGGAACACACTGACCTTGTG +
Preference number: 4 (lower is better)
Translates to: WEHTDLVSHGLRNSRSTGTWDPH*EHTDLV
Trigger: CACAAGGTCAGTGTGTTCCCAGTGAGGGTCCCAAGT...TCCTGTAGACCTGCTGTTCCGCAGACCATGGGACACAAGGTCAGTGTGTTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR CAA 72 bp AAAAGGCACGCAGGCCTGACCTGTCTGTACTGTGTCTaGACCGCAAAGTCCCACACCAGAACCATGGCTCAA +
Preference number: 4 (lower is better)
Translates to: KRHAGLTCLYCV*TAKSHTRTMAQ
Trigger: TTGAGCCATGGTTCTGGTGTGGGACTTTGCGGTCAAGACACAGTACAGACAGGTCAGGCCTGCGTGCCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp CTCCTAGACCCATGCCCTATAAGGAGATCCCCCACCTTCTTCTTGCCATCAGAACATCTCTCTGGAAGTTaGTGGCTCCCTCGAGCACCT +
Preference number: 4 (lower is better)
Translates to: LLDPCPIRRSPTFFLPSEHLSGS*WLPRAP
Trigger: AGGTGCTCGAGGGAGCCATCAACTTCCAGAGAGATG...TTCTGATGGCAAGAAGAAGGTGGGGGATCTCCTTATAGGGCATGGGTCTAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp AGGGCTGCACCCAATCTCAGACTTTCTCCAAACCCCGCTCTTGCTGTTAATGCTCTGGGCTTAGATGCTTaGCTCTTTAGGGGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: RAAPNLRLSPNPALAVNALGLDA*LFRGQV
Trigger: GACCTGCCCCCTAAAGAGTCAAGCATCTAAGCCCAG...AGCATTAACAGCAAGAGCGGGGTTTGGAGAAAGTCTGAGATTGGGTGCAGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp CTGGGGGACAGGTCTTCAGCTGGGCCTCAGGACTGGCCATTATGCATACCAGAACGTGTCCGCTGTTTGTaGTACAGTAGAGCAATATGC +
Preference number: 4 (lower is better)
Translates to: LGDRSSAGPQDWPLCIPERVRCL*YSRAIC
Trigger: GCATATTGCTCTACTGTATCACAAACAGCGGACACG...TTCTGGTATGCATAATGGCCAGTCCTGAGGCCCAGCTGAAGACCTGTCCCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp CTGGGGGACAGGTCTTCAGCTGGGCCTCAGGACTGGCCATTATGCATACCAGAACTTCGGTTACCTCTATaGGCTGCCATAGGAGCAAAT +
Preference number: 4 (lower is better)
Translates to: LGDRSSAGPQDWPLCIPELRLPL*AAIGAN
Trigger: ATTTGCTCCTATGGCAGCTCATAGAGGTAACCGAAG...TTCTGGTATGCATAATGGCCAGTCCTGAGGCCCAGCTGAAGACCTGTCCCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp TCTTGCCCTATCTGTGCAGGACAATCCCCTGTGGGCATTTCCCTGAACTGCTCCACCATCTTCCCTCACTaGCAGGTGTCACTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: SCPICAGQSPVGISLNCSTIFPH*QVSLSP
Trigger: AGGAGAAAGTGACACCTGGCAGTGAGGGAAGATGGT...GGAGCAGTTCAGGGAAATGCCCACAGGGGATTGTCCTGCACAGATAGGGCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp GGCAAAATTCTAGTTTCAAGAGGGCCATCCAATACTCCCACTTTAATGGAACAGGCCCACCAGAGGGGATaGTGGTGGAGGCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: GKILVSRGPSNTPTLMEQAHQRG*WWRPRV
Trigger: GACCCTGGGCCTCCACCACCATCCCCTCTGGTGGGC...CTGTTCCATTAAAGTGGGAGTATTGGATGGCCCTCTTGAAACTAGAATTTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp GAAAAGGCACGCAGGCCTGACCTGTCTGTACTGTGTCTTGACCGCAAAGTCCCACACGACTGCTTGTCCTaGAGTGGGAAGATCTTGACA +
Preference number: 4 (lower is better)
Translates to: EKARRPDLSVLCLDRKVPHDCLS*SGKILT
Trigger: TGTCAAGATCTTCCCACTCCAGGACAAGCAGTCGTG...TGGGACTTTGCGGTCAAGACACAGTACAGACAGGTCAGGCCTGCGTGCCTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp TGGGAACACACTGACCTTGTGTCCCATGGTCTGCGGAACAGCAGGTCTACAGGAACAGCACCAACCCCATaGCATACATGTCAATGCGCA +
Preference number: 4 (lower is better)
Translates to: WEHTDLVSHGLRNSRSTGTAPTP*HTCQCA
Trigger: TGCGCATTGACATGTATGCCATGGGGTTGGTGCTGT...TCCTGTAGACCTGCTGTTCCGCAGACCATGGGACACAAGGTCAGTGTGTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp TGGGAACACACTGACCTTGTGTCCCATGGTCTGCGGAACAGCAGGTCTACAGGATCCAACGAAGGGTGCTaGCCAATCTCTTCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: WEHTDLVSHGLRNSRSTGSNEGC*PISSSK
Trigger: CTTTGAGGAAGAGATTGGCCAGCACCCTTCGTTGGA...TCCTGTAGACCTGCTGTTCCGCAGACCATGGGACACAAGGTCAGTGTGTTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp GGCCTGACCTGTCTGTACTGTGTCTTGACCGCAAAGTCCCACACCAGAACCATGTCCTCACTGGGCTCCTaGCTGATTCCACAGATTGAA +
Preference number: 4 (lower is better)
Translates to: GLTCLYCVLTAKSHTRTMSSLGS*LIPQIE
Trigger: TTCAATCTGTGGAATCAGCCAGGAGCCCAGTGAGGA...CATGGTTCTGGTGTGGGACTTTGCGGTCAAGACACAGTACAGACAGGTCAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR CAA 72 bp ACTCTAGACCCATCCCACCACAATGCCATGACGAGCTaGCCAGAAGCCCTTTCTTCAGTCCTTGGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: TLDPSHHNAMTS*PEALSSVLGKS
Trigger: ACTCTTCCCAAGGACTGAAGAAAGGGCTTCTGGCAAGCTCGTCATGGCATTGTGGTGGGATGGGTCTAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp GAAAAGGCACGCAGGCCTGACCTGTCTGTACTGTGTCTTGACCGCAAAGTCCCACAGGCAGAGGCTCTATaGCCCAGTAAATTCAAAGCA +
Preference number: 4 (lower is better)
Translates to: EKARRPDLSVLCLDRKVPQAEAL*PSKFKA
Trigger: TGCTTTGAATTTACTGGGTCATAGAGCCTCTGCCTG...TGGGACTTTGCGGTCAAGACACAGTACAGACAGGTCAGGCCTGCGTGCCTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp TCTTGCCCTATCTGTGCAGGACAATCCCCTGTGGGCATTTCCCTGAACTGCTCCTTCATGTCACCCCAGTaGGAAGGAGAAAAAGACACC +
Preference number: 4 (lower is better)
Translates to: SCPICAGQSPVGISLNCSFMSPQ*EGEKDT
Trigger: GGTGTCTTTTTCTCCTTCTCACTGGGGTGACATGAA...GGAGCAGTTCAGGGAAATGCCCACAGGGGATTGTCCTGCACAGATAGGGCAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp CTCCTAGACCCATGCCCTATAAGGAGATCCCCCACCTTCTTCTTGCCATCAGAAAGGAGAGTCAGGGAATaGGCCCACACTCAACCAACA +
Preference number: 4 (lower is better)
Translates to: LLDPCPIRRSPTFFLPSERRVRE*AHTQPT
Trigger: TGTTGGTTGAGTGTGGGCTCATTCCCTGACTCTCCT...TTCTGATGGCAAGAAGAAGGTGGGGGATCTCCTTATAGGGCATGGGTCTAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp TCTTGCCCTATCTGTGCAGGACAATCCCCTGTGGGCATTTCCCTGAACTGCTCCTCACATCGGTTTATTTaGGGACCCAGTGCAGAGTTC +
Preference number: 4 (lower is better)
Translates to: SCPICAGQSPVGISLNCSSHRFI*GPSAEF
Trigger: GAACTCTGCACTGGGTCCTCAAATAAACCGATGTGA...GGAGCAGTTCAGGGAAATGCCCACAGGGGATTGTCCTGCACAGATAGGGCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp GAAAAGGCACGCAGGCCTGACCTGTCTGTACTGTGTCTTGACCGCAAAGTCCCATGGCATACATGTCAATaGGCAGGAAGGCATCTCTCT +
Preference number: 4 (lower is better)
Translates to: EKARRPDLSVLCLDRKVPWHTCQ*AGRHLS
Trigger: AGAGAGATGCCTTCCTGCGCATTGACATGTATGCCA...TGGGACTTTGCGGTCAAGACACAGTACAGACAGGTCAGGCCTGCGTGCCTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp TCTTGCCCTATCTGTGCAGGACAATCCCCTGTGGGCATTTCCCTGAACTGCTCCATACCACCTGATGGGTaGACTTTACACCACAGCATG +
Preference number: 4 (lower is better)
Translates to: SCPICAGQSPVGISLNCSIPPDG*TLHHSM
Trigger: CATGCTGTGGTGTAAAGTGCACCCATCAGGTGGTAT...GGAGCAGTTCAGGGAAATGCCCACAGGGGATTGTCCTGCACAGATAGGGCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp TGGGAACACACTGACCTTGTGTCCCATGGTCTGCGGAACAGCAGGTCTACAGGAGTTCCACACCACTCATaGTCCAGTGTACGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: WEHTDLVSHGLRNSRSTGVPHHS*SSVRFS
Trigger: AGAGAAACGTACACTGGAGCATGAGTGGTGTGGAAC...TCCTGTAGACCTGCTGTTCCGCAGACCATGGGACACAAGGTCAGTGTGTTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp CTGGGGGACAGGTCTTCAGCTGGGCCTCAGGACTGGCCATTATGCATACCAGAACTTTTAATCTTGGTCTaGCATCTATGCCCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: LGDRSSAGPQDWPLCIPELLILV*HLCPRD
Trigger: GTCTCTGGGGCATAGATGGCAGACCAAGATTAAAAG...TTCTGGTATGCATAATGGCCAGTCCTGAGGCCCAGCTGAAGACCTGTCCCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp GGGATTCTCTTGATAAAACTATCCCGTCCAGTGCACCTCTGTCTAGAAGCAGCACAGCAGAAGTACACCTaGGGGTTCTCCTCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: GILLIKLSRPVHLCLEAAQQKYT*GFSSVA
Trigger: GGCCACTGAGGAGAACCCCCAGGTGTACTTCTGCTG...TGCTGCTTCTAGACAGAGGTGCACTGGACGGGATAGTTTTATCAAGAGAATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp AGGGCTGCACCCAATCTCAGACTTTCTCCAAACCCCGCTCTTGCTGTTAATGCTCCCTGGAGGTTTCCCTaGCTCAAATCGAACAGCCAA +
Preference number: 4 (lower is better)
Translates to: RAAPNLRLSPNPALAVNAPWRFP*LKSNSQ
Trigger: TTGGCTGTTCGATTTGAGCCAGGGAAACCTCCAGGG...AGCATTAACAGCAAGAGCGGGGTTTGGAGAAAGTCTGAGATTGGGTGCAGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp AGGGCTGCACCCAATCTCAGACTTTCTCCAAACCCCGCTCTTGCTGTTAATGCTTCTTCAGCATGGCGCTaGTTCTGCATCCACAGCTCA +
Preference number: 4 (lower is better)
Translates to: RAAPNLRLSPNPALAVNASSAWR*FCIHSS
Trigger: TGAGCTGTGGATGCAGAACCAGCGCCATGCTGAAGA...AGCATTAACAGCAAGAGCGGGGTTTGGAGAAAGTCTGAGATTGGGTGCAGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp AGGGCTGCACCCAATCTCAGACTTTCTCCAAACCCCGCTCTTGCTGTTAATGCTGCTGCACTAAAAGACTaGCCTGAGTCACGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: RAAPNLRLSPNPALAVNAAALKD*PESRCA
Trigger: AGCACACCGTGACTCAGGCCAGTCTTTTAGTGCAGC...AGCATTAACAGCAAGAGCGGGGTTTGGAGAAAGTCTGAGATTGGGTGCAGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp GGCCTGACCTGTCTGTACTGTGTCTTGACCGCAAAGTCCCACACCAGAACCATGAGCCTCTTAGGGCAATaGAAGAACTATCTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: GLTCLYCVLTAKSHTRTMSLLGQ*KNYLCG
Trigger: GCCACAGAGATAGTTCTTCCATTGCCCTAAGAGGCT...CATGGTTCTGGTGTGGGACTTTGCGGTCAAGACACAGTACAGACAGGTCAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp GAAAAGGCACGCAGGCCTGACCTGTCTGTACTGTGTCTTGACCGCAAAGTCCCAGATGGGGTTGGTTTCTaGAGTGCTACTAGATCTGCT +
Preference number: 4 (lower is better)
Translates to: EKARRPDLSVLCLDRKVPDGVGF*SATRSA
Trigger: AGCAGATCTAGTAGCACTCCAGAAACCAACCCCATC...TGGGACTTTGCGGTCAAGACACAGTACAGACAGGTCAGGCCTGCGTGCCTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp GGCCTGACCTGTCTGTACTGTGTCTTGACCGCAAAGTCCCACACCAGAACCATGCACACACTTAACTCGTaGCAGTGCTCTGAGAAAACC +
Preference number: 4 (lower is better)
Translates to: GLTCLYCVLTAKSHTRTMHTLNS*QCSEKT
Trigger: GGTTTTCTCAGAGCACTGCCACGAGTTAAGTGTGTG...CATGGTTCTGGTGTGGGACTTTGCGGTCAAGACACAGTACAGACAGGTCAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp TGGGAACACACTGACCTTGTGTCCCATGGTCTGCGGAACAGCAGGTCTACAGGATTTCTTCAGATCCACTaGGTCTGGACAGACACTCAT +
Preference number: 4 (lower is better)
Translates to: WEHTDLVSHGLRNSRSTGFLQIH*VWTDTH
Trigger: ATGAGTGTCTGTCCAGACTCAGTGGATCTGAAGAAA...TCCTGTAGACCTGCTGTTCCGCAGACCATGGGACACAAGGTCAGTGTGTTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp TGGGAACACACTGACCTTGTGTCCCATGGTCTGCGGAACAGCAGGTCTACAGGACAATTCCTGGTTACCTaGGAAGTAGCCTCCATACTA +
Preference number: 4 (lower is better)
Translates to: WEHTDLVSHGLRNSRSTGQFLVT*EVASIL
Trigger: TAGTATGGAGGCTACTTCTCAGGTAACCAGGAATTG...TCCTGTAGACCTGCTGTTCCGCAGACCATGGGACACAAGGTCAGTGTGTTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp CTGGGGGACAGGTCTTCAGCTGGGCCTCAGGACTGGCCATTATGCATACCAGAAATTTCTGGTTTGAGGTaGTCTGTGGTCGTGAAGTTT +
Preference number: 4 (lower is better)
Translates to: LGDRSSAGPQDWPLCIPEISGLR*SVVVKF
Trigger: AAACTTCACGACCACAGATCACCTCAAACCAGAAAT...TTCTGGTATGCATAATGGCCAGTCCTGAGGCCCAGCTGAAGACCTGTCCCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp GGCCTGACCTGTCTGTACTGTGTCTTGACCGCAAAGTCCCACACCAGAACCATGTGCCTACCCTCACGATaGAGAGATGCACTGTTTTTA +
Preference number: 4 (lower is better)
Translates to: GLTCLYCVLTAKSHTRTMCLPSR*RDALFL
Trigger: TAAAAACAGTGCATCTCTTCATCGTGAGGGTAGGCA...CATGGTTCTGGTGTGGGACTTTGCGGTCAAGACACAGTACAGACAGGTCAGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp AGGGCTGCACCCAATCTCAGACTTTCTCCAAACCCCGCTCTTGCTGTTAATGCTACTAAAAGACTGGCCTaGGTCACGGTGTGCTTCACA +
Preference number: 4 (lower is better)
Translates to: RAAPNLRLSPNPALAVNATKRLA*VTVCFT
Trigger: TGTGAAGCACACCGTGACTCAGGCCAGTCTTTTAGT...AGCATTAACAGCAAGAGCGGGGTTTGGAGAAAGTCTGAGATTGGGTGCAGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp GGGATTCTCTTGATAAAACTATCCCGTCCAGTGCACCTCTGTCTAGAAGCAGCAAAAGGCACGCAGGCCTaGCCTGTCTGTACTGTGTCT +
Preference number: 4 (lower is better)
Translates to: GILLIKLSRPVHLCLEAAKGTQA*PVCTVS
Trigger: AGACACAGTACAGACAGGTCAGGCCTGCGTGCCTTT...TGCTGCTTCTAGACAGAGGTGCACTGGACGGGATAGTTTTATCAAGAGAATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp CTCCTAGACCCATGCCCTATAAGGAGATCCCCCACCTTCTTCTTGCCATCAGAAAGGAGCCTGCTTGGATaGCAGCACACTAGAAAGGAA +
Preference number: 4 (lower is better)
Translates to: LLDPCPIRRSPTFFLPSERSLLG*QHTRKE
Trigger: TTCCTTTCTAGTGTGCTGTCATCCAAGCAGGCTCCT...TTCTGATGGCAAGAAGAAGGTGGGGGATCTCCTTATAGGGCATGGGTCTAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp AAAATGAAGACCACTTTCCGTATTGTGGCAGTGATGCTGAGCTTCCTCAGAAAACTAGAAGCAGCAGCCTaGAGCCAGCGGGCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: KMKTTFRIVAVMLSFLRKLEAAA*SQRAGS
Trigger: AGACCCTGCCCGCTGGCTTCAGGCTGCTGCTTCTAG...TTTTCTGAGGAAGCTCAGCATCACTGCCACAATACGGAAAGTGGTCTTCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp CTCCTAGACCCATGCCCTATAAGGAGATCCCCCACCTTCTTCTTGCCATCAGAAGAAGCACCATTCAGATaGCACTCTAGACCCATCCCA +
Preference number: 4 (lower is better)
Translates to: LLDPCPIRRSPTFFLPSEEAPFR*HSRPIP
Trigger: TGGGATGGGTCTAGAGTGTCATCTGAATGGTGCTTC...TTCTGATGGCAAGAAGAAGGTGGGGGATCTCCTTATAGGGCATGGGTCTAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp AGGGCTGCACCCAATCTCAGACTTTCTCCAAACCCCGCTCTTGCTGTTAATGCTAGACCCATCCTCACCTaGCTGAAAAACTTGTGGGTC +
Preference number: 4 (lower is better)
Translates to: RAAPNLRLSPNPALAVNARPILT*LKNLWV
Trigger: GACCCACAAGTTTTTCAGGCAGGTGAGGATGGGTCT...AGCATTAACAGCAAGAGCGGGGTTTGGAGAAAGTCTGAGATTGGGTGCAGCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp GAAAAGGCACGCAGGCCTGACCTGTCTGTACTGTGTCTTGACCGCAAAGTCCCAGAGCTATCTGAAAGATaGTCTGCTGTTACTGGGGTT +
Preference number: 4 (lower is better)
Translates to: EKARRPDLSVLCLDRKVPELSER*SAVTGV
Trigger: AACCCCAGTAACAGCAGAGCATCTTTCAGATAGCTC...TGGGACTTTGCGGTCAAGACACAGTACAGACAGGTCAGGCCTGCGTGCCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp TGGGAACACACTGACCTTGTGTCCCATGGTCTGCGGAACAGCAGGTCTACAGGAAAAGCTTACAGCAGTTaGTTTTGGGGCGAAGAGAGT +
Preference number: 4 (lower is better)
Translates to: WEHTDLVSHGLRNSRSTGKAYSS*FWGEES
Trigger: ACTCTCTTCGCCCCAAAAGCAACTGCTGTAAGCTTT...TCCTGTAGACCTGCTGTTCCGCAGACCATGGGACACAAGGTCAGTGTGTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp TGGGAACACACTGACCTTGTGTCCCATGGTCTGCGGAACAGCAGGTCTACAGGATTAGTGAAAAGAAACTaGTCAGGGCCAGCAGGTAAG +
Preference number: 4 (lower is better)
Translates to: WEHTDLVSHGLRNSRSTGLVKRN*SGPAGK
Trigger: CTTACCTGCTGGCCCTGACCAGTTTCTTTTCACTAA...TCCTGTAGACCTGCTGTTCCGCAGACCATGGGACACAAGGTCAGTGTGTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp CAGGGGATACAGGAAGTACCACAATCAAAAAGTCATGTTTCATTCATACCTGGAAGAGGTGCAGGACTCTaGGGTCCCCAGCGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: QGIQEVPQSKSHVSFIPGRGAGL*GPQRGR
Trigger: CCTGCCTCGCTGGGGACCCCAGAGTCCTGCACCTCT...TCCAGGTATGAATGAAACATGACTTTTTGATTGTGGTACTTCCTGTATCCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp CTCCTAGACCCATGCCCTATAAGGAGATCCCCCACCTTCTTCTTGCCATCAGAAGTTCCTGTAACCACTTaGCCAGCCCACATTTTGACC +
Preference number: 4 (lower is better)
Translates to: LLDPCPIRRSPTFFLPSEVPVTT*PAHILT
Trigger: GGTCAAAATGTGGGCTGGCCAAGTGGTTACAGGAAC...TTCTGATGGCAAGAAGAAGGTGGGGGATCTCCTTATAGGGCATGGGTCTAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR CAA 72 bp AACCCTGTTCCTGTAACCACTTGGCCAGCCCACATTTaGACCCATGAAGCAAAAACTGAGCTCCGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: NPVPVTTWPAHI*THEAKTELREG
Trigger: TCCCTCTCGGAGCTCAGTTTTTGCTTCATGGGTCAAAATGTGGGCTGGCCAAGTGGTTACAGGAACAGGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp GGGATTCTCTTGATAAAACTATCCCGTCCAGTGCACCTCTGTCTAGAAGCAGCAGCTTCTCGGCAGCAATaGACTGTAGCAGGTTCTCGT +
Preference number: 4 (lower is better)
Translates to: GILLIKLSRPVHLCLEAAASRQQ*TVAGSR
Trigger: ACGAGAACCTGCTACAGTTCATTGCTGCCGAGAAGC...TGCTGCTTCTAGACAGAGGTGCACTGGACGGGATAGTTTTATCAAGAGAATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp CTCCTAGACCCATGCCCTATAAGGAGATCCCCCACCTTCTTCTTGCCATCAGAACACCCGTTAGATCCGTaGAAGACACATCTGCTGTTT +
Preference number: 4 (lower is better)
Translates to: LLDPCPIRRSPTFFLPSEHPLDP*KTHLLF
Trigger: AAACAGCAGATGTGTCTTTCACGGATCTAACGGGTG...TTCTGATGGCAAGAAGAAGGTGGGGGATCTCCTTATAGGGCATGGGTCTAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp TGGGAACACACTGACCTTGTGTCCCATGGTCTGCGGAACAGCAGGTCTACAGGAATTAGGAACATTCACTaGCTAGAGCAAGGTTATGGC +
Preference number: 4 (lower is better)
Translates to: WEHTDLVSHGLRNSRSTGIRNIH*LEQGYG
Trigger: GCCATAACCTTGCTCTAGTCAGTGAATGTTCCTAAT...TCCTGTAGACCTGCTGTTCCGCAGACCATGGGACACAAGGTCAGTGTGTTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp GGCCTGACCTGTCTGTACTGTGTCTTGACCGCAAAGTCCCACACCAGAACCATGGTTCAGGTAGTATCATaGCCTAACTATTCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: GLTCLYCVLTAKSHTRTMVQVVS*PNYSCS
Trigger: ACTGCAGGAATAGTTAGGTCATGATACTACCTGAAC...CATGGTTCTGGTGTGGGACTTTGCGGTCAAGACACAGTACAGACAGGTCAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp GGCCTGACCTGTCTGTACTGTGTCTTGACCGCAAAGTCCCACACCAGAACCATGTCCTCAAAGAACACATaGCAGCAAACAGACAAGCAT +
Preference number: 4 (lower is better)
Translates to: GLTCLYCVLTAKSHTRTMSSKNT*QQTDKH
Trigger: ATGCTTGTCTGTTTGCTGTCATGTGTTCTTTGAGGA...CATGGTTCTGGTGTGGGACTTTGCGGTCAAGACACAGTACAGACAGGTCAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp CTCCTAGACCCATGCCCTATAAGGAGATCCCCCACCTTCTTCTTGCCATCAGAACCATCCTCACCTGCCTaGAAAACTTGTGGGTCATAT +
Preference number: 4 (lower is better)
Translates to: LLDPCPIRRSPTFFLPSEPSSPA*KTCGSY
Trigger: ATATGACCCACAAGTTTTTCAGGCAGGTGAGGATGG...TTCTGATGGCAAGAAGAAGGTGGGGGATCTCCTTATAGGGCATGGGTCTAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp CTCCTAGACCCATGCCCTATAAGGAGATCCCCCACCTTCTTCTTGCCATCAGAAGTTCGTTGCAGAAGTTaGCTTCACAGCAGCAGAAGT +
Preference number: 4 (lower is better)
Translates to: LLDPCPIRRSPTFFLPSEVRCRS*LHSSRS
Trigger: ACTTCTGCTGCTGTGAAGGCAACTTCTGCAACGAAC...TTCTGATGGCAAGAAGAAGGTGGGGGATCTCCTTATAGGGCATGGGTCTAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp GGCCTGACCTGTCTGTACTGTGTCTTGACCGCAAAGTCCCACACCAGAACCATGTTGGTCTGCCATCTATaGCCCAGAGACAAAAATTCA +
Preference number: 4 (lower is better)
Translates to: GLTCLYCVLTAKSHTRTMLVCHL*PRDKNS
Trigger: TGAATTTTTGTCTCTGGGGCATAGATGGCAGACCAA...CATGGTTCTGGTGTGGGACTTTGCGGTCAAGACACAGTACAGACAGGTCAGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp AGGGCTGCACCCAATCTCAGACTTTCTCCAAACCCCGCTCTTGCTGTTAATGCTTTGTTGGGGTGTAACTaGTTCTTCACACAGGGGGAA +
Preference number: 4 (lower is better)
Translates to: RAAPNLRLSPNPALAVNALLGCN*FFTQGE
Trigger: TTCCCCCTGTGTGAAGAAGCAGTTACACCCCAACAA...AGCATTAACAGCAAGAGCGGGGTTTGGAGAAAGTCTGAGATTGGGTGCAGCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp AGGGCTGCACCCAATCTCAGACTTTCTCCAAACCCCGCTCTTGCTGTTAATGCTCTTTTAAAGTCCCTGTaGGCAATAGACGGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: RAAPNLRLSPNPALAVNALLKSL*AIDGLW
Trigger: CCACAAGCCGTCTATTGCCCACAGGGACTTTAAAAG...AGCATTAACAGCAAGAGCGGGGTTTGGAGAAAGTCTGAGATTGGGTGCAGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp AAAATGAAGACCACTTTCCGTATTGTGGCAGTGATGCTGAGCTTCCTCAGAAAAGTGCCTACCTGTCCGTaGGTGTCCCCTGGAGGTTTC +
Preference number: 4 (lower is better)
Translates to: KMKTTFRIVAVMLSFLRKVPTCP*VSPGGF
Trigger: GAAACCTCCAGGGGACACCCACGGACAGGTAGGCAC...TTTTCTGAGGAAGCTCAGCATCACTGCCACAATACGGAAAGTGGTCTTCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp GGGATTCTCTTGATAAAACTATCCCGTCCAGTGCACCTCTGTCTAGAAGCAGCAGGCTCAACCCTCCCTTaGCCAGGTCAAAACTTCTCA +
Preference number: 4 (lower is better)
Translates to: GILLIKLSRPVHLCLEAAGSTLP*PGQNFS
Trigger: TGAGAAGTTTTGACCTGGCCAAGGGAGGGTTGAGCC...TGCTGCTTCTAGACAGAGGTGCACTGGACGGGATAGTTTTATCAAGAGAATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp AAAATGAAGACCACTTTCCGTATTGTGGCAGTGATGCTGAGCTTCCTCAGAAAACCCACACCAGAACCATaGCTCAACCCTCCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: KMKTTFRIVAVMLSFLRKPTPEP*LNPPLA
Trigger: GGCCAAGGGAGGGTTGAGCCATGGTTCTGGTGTGGG...TTTTCTGAGGAAGCTCAGCATCACTGCCACAATACGGAAAGTGGTCTTCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp GAAAAGGCACGCAGGCCTGACCTGTCTGTACTGTGTCTTGACCGCAAAGTCCCACCTTCTGCTCATTACTaGATTTCTCCAACTAGGGAT +
Preference number: 4 (lower is better)
Translates to: EKARRPDLSVLCLDRKVPPSAHY*ISPTRD
Trigger: ATCCCTAGTTGGAGAAATCCAGTAATGAGCAGAAGG...TGGGACTTTGCGGTCAAGACACAGTACAGACAGGTCAGGCCTGCGTGCCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp GGCAAAATTCTAGTTTCAAGAGGGCCATCCAATACTCCCACTTTAATGGAACAGATCAGCTGGCACGTGTaGGTATGCCCTCCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: GKILVSRGPSNTPTLMEQISWHV*VCPPQA
Trigger: TGCCTGGGGAGGGCATACCCACACGTGCCAGCTGAT...CTGTTCCATTAAAGTGGGAGTATTGGATGGCCCTCTTGAAACTAGAATTTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp CTGGGGGACAGGTCTTCAGCTGGGCCTCAGGACTGGCCATTATGCATACCAGAACTTCTTAAAAAGGTATaGTCTGATGCCCCTGAAATG +
Preference number: 4 (lower is better)
Translates to: LGDRSSAGPQDWPLCIPELLKKV*SDAPEM
Trigger: CATTTCAGGGGCATCAGACCATACCTTTTTAAGAAG...TTCTGGTATGCATAATGGCCAGTCCTGAGGCCCAGCTGAAGACCTGTCCCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp GGGATTCTCTTGATAAAACTATCCCGTCCAGTGCACCTCTGTCTAGAAGCAGCAGCTGGGCCTCAGGACTaGCCATTATGCATACCAGAA +
Preference number: 4 (lower is better)
Translates to: GILLIKLSRPVHLCLEAAAGPQD*PLCIPE
Trigger: TTCTGGTATGCATAATGGCCAGTCCTGAGGCCCAGC...TGCTGCTTCTAGACAGAGGTGCACTGGACGGGATAGTTTTATCAAGAGAATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp CTCCTAGACCCATGCCCTATAAGGAGATCCCCCACCTTCTTCTTGCCATCAGAATCCAAGACACGTGGCTaGAGAGCAGAGAAAATGTTC +
Preference number: 4 (lower is better)
Translates to: LLDPCPIRRSPTFFLPSESKTRG*RAEKMF
Trigger: GAACATTTTCTCTGCTCTCCAGCCACGTGTCTTGGA...TTCTGATGGCAAGAAGAAGGTGGGGGATCTCCTTATAGGGCATGGGTCTAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp GAAAAGGCACGCAGGCCTGACCTGTCTGTACTGTGTCTTGACCGCAAAGTCCCATTGTGTCACAGATTCTaGGACGACAAACAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: EKARRPDLSVLCLDRKVPLCHRF*DDKQRE
Trigger: TTCTCTTTGTTTGTCGTCTCAGAATCTGTGACACAA...TGGGACTTTGCGGTCAAGACACAGTACAGACAGGTCAGGCCTGCGTGCCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp CTGGGGGACAGGTCTTCAGCTGGGCCTCAGGACTGGCCATTATGCATACCAGAAGGTGATCTGTGGTCGTaGAGTTTTAATTCTTTTACT +
Preference number: 4 (lower is better)
Translates to: LGDRSSAGPQDWPLCIPEGDLWS*SFNSFT
Trigger: AGTAAAAGAATTAAAACTTCACGACCACAGATCACC...TTCTGGTATGCATAATGGCCAGTCCTGAGGCCCAGCTGAAGACCTGTCCCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp AGGGCTGCACCCAATCTCAGACTTTCTCCAAACCCCGCTCTTGCTGTTAATGCTCCAAACACTCTCACATaGCTATGTCCTATGGCAAAG +
Preference number: 4 (lower is better)
Translates to: RAAPNLRLSPNPALAVNAPNTLT*LCPMAK
Trigger: CTTTGCCATAGGACATAGTCATGTGAGAGTGTTTGG...AGCATTAACAGCAAGAGCGGGGTTTGGAGAAAGTCTGAGATTGGGTGCAGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp TGGGAACACACTGACCTTGTGTCCCATGGTCTGCGGAACAGCAGGTCTACAGGATCAGATGAGGTCTCCTaGAGAATCTCTAATAATCAC +
Preference number: 4 (lower is better)
Translates to: WEHTDLVSHGLRNSRSTGSDEVS*RISNNH
Trigger: GTGATTATTAGAGATTCTTCAGGAGACCTCATCTGA...TCCTGTAGACCTGCTGTTCCGCAGACCATGGGACACAAGGTCAGTGTGTTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp CTCCTAGACCCATGCCCTATAAGGAGATCCCCCACCTTCTTCTTGCCATCAGAACCTCTCCCTCAATTCTaGAGTACCACTCAACTTTCT +
Preference number: 4 (lower is better)
Translates to: LLDPCPIRRSPTFFLPSEPLPQF*STTQLS
Trigger: AGAAAGTTGAGTGGTACTTCAGAATTGAGGGAGAGG...TTCTGATGGCAAGAAGAAGGTGGGGGATCTCCTTATAGGGCATGGGTCTAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp AAAATGAAGACCACTTTCCGTATTGTGGCAGTGATGCTGAGCTTCCTCAGAAAAGCATGGCGCTGGTTCTaGATCCACAGCTCAGCACCT +
Preference number: 4 (lower is better)
Translates to: KMKTTFRIVAVMLSFLRKAWRWF*IHSSAP
Trigger: AGGTGCTGAGCTGTGGATGCAGAACCAGCGCCATGC...TTTTCTGAGGAAGCTCAGCATCACTGCCACAATACGGAAAGTGGTCTTCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp AGGGCTGCACCCAATCTCAGACTTTCTCCAAACCCCGCTCTTGCTGTTAATGCTAACAAGACTGATAAATaGCCAGACTTGGCCCAGACA +
Preference number: 4 (lower is better)
Translates to: RAAPNLRLSPNPALAVNANKTDK*PDLAQT
Trigger: TGTCTGGGCCAAGTCTGGGCATTTATCAGTCTTGTT...AGCATTAACAGCAAGAGCGGGGTTTGGAGAAAGTCTGAGATTGGGTGCAGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp TCTTGCCCTATCTGTGCAGGACAATCCCCTGTGGGCATTTCCCTGAACTGCTCCCAGGATGAAGTGCTTTaGTGTCTAAGTTATGTCAAG +
Preference number: 4 (lower is better)
Translates to: SCPICAGQSPVGISLNCSQDEVL*CLSYVK
Trigger: CTTGACATAACTTAGACAGCAAAGCACTTCATCCTG...GGAGCAGTTCAGGGAAATGCCCACAGGGGATTGTCCTGCACAGATAGGGCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp AGGGCTGCACCCAATCTCAGACTTTCTCCAAACCCCGCTCTTGCTGTTAATGCTCAGAACTCATGCATTTaGAAGAAGACCCATCCTCAC +
Preference number: 4 (lower is better)
Translates to: RAAPNLRLSPNPALAVNAQNSCI*KKTHPH
Trigger: GTGAGGATGGGTCTTCTTGCAAATGCATGAGTTCTG...AGCATTAACAGCAAGAGCGGGGTTTGGAGAAAGTCTGAGATTGGGTGCAGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp GAAAAGGCACGCAGGCCTGACCTGTCTGTACTGTGTCTTGACCGCAAAGTCCCAAAATTGACTCCAGTCTaGCAGTGTATCACAAGAATC +
Preference number: 4 (lower is better)
Translates to: EKARRPDLSVLCLDRKVPKLTPV*QCITRI
Trigger: GATTCTTGTGATACACTGGCAGACTGGAGTCAATTT...TGGGACTTTGCGGTCAAGACACAGTACAGACAGGTCAGGCCTGCGTGCCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp GGCAAAATTCTAGTTTCAAGAGGGCCATCCAATACTCCCACTTTAATGGAACAGCGAGAGGGAAGCAAATaGGCCTCCCATAGCACCCTG +
Preference number: 4 (lower is better)
Translates to: GKILVSRGPSNTPTLMEQREGSK*ASHSTL
Trigger: CAGGGTGCTATGGGAGGCCCATTTGCTTCCCTCTCG...CTGTTCCATTAAAGTGGGAGTATTGGATGGCCCTCTTGAAACTAGAATTTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp CTCCTAGACCCATGCCCTATAAGGAGATCCCCCACCTTCTTCTTGCCATCAGAAAGAAGCAAGGATCCTTaGCTACTCTCTGCTAACTTG +
Preference number: 4 (lower is better)
Translates to: LLDPCPIRRSPTFFLPSERSKDP*LLSANL
Trigger: CAAGTTAGCAGAGAGTAGCCAAGGATCCTTGCTTCT...TTCTGATGGCAAGAAGAAGGTGGGGGATCTCCTTATAGGGCATGGGTCTAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp TCTTGCCCTATCTGTGCAGGACAATCCCCTGTGGGCATTTCCCTGAACTGCTCCACAAGAAGGCCATGCTaGACAACAAAGGCTAATAAT +
Preference number: 4 (lower is better)
Translates to: SCPICAGQSPVGISLNCSTRRPC*TTKANN
Trigger: ATTATTAGCCTTTGTTGTCCAGCATGGCCTTCTTGT...GGAGCAGTTCAGGGAAATGCCCACAGGGGATTGTCCTGCACAGATAGGGCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp AGGGCTGCACCCAATCTCAGACTTTCTCCAAACCCCGCTCTTGCTGTTAATGCTAAGTATCACTGGTTTTaGCACTACAGGGGATACAGG +
Preference number: 4 (lower is better)
Translates to: RAAPNLRLSPNPALAVNAKYHWF*HYRGYR
Trigger: CCTGTATCCCCTGTAGTGCCAAAACCAGTGATACTT...AGCATTAACAGCAAGAGCGGGGTTTGGAGAAAGTCTGAGATTGGGTGCAGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp GGCCTGACCTGTCTGTACTGTGTCTTGACCGCAAAGTCCCACACCAGAACCATGCAAATAAAGTATCACTaGTTTTGGCACTACAGGGGA +
Preference number: 4 (lower is better)
Translates to: GLTCLYCVLTAKSHTRTMQIKYH*FWHYRG
Trigger: TCCCCTGTAGTGCCAAAACCAGTGATACTTTATTTG...CATGGTTCTGGTGTGGGACTTTGCGGTCAAGACACAGTACAGACAGGTCAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp CAGGGGATACAGGAAGTACCACAATCAAAAAGTCATGTTTCATTCATACCTGGAGGACACTATAGTGGCTaGGCGTACGGTGGGCCTAAC +
Preference number: 4 (lower is better)
Translates to: QGIQEVPQSKSHVSFIPGGHYSG*AYGGPN
Trigger: GTTAGGCCCACCGTACGCTCAGCCACTATAGTGTCC...TCCAGGTATGAATGAAACATGACTTTTTGATTGTGGTACTTCCTGTATCCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp GGGATTCTCTTGATAAAACTATCCCGTCCAGTGCACCTCTGTCTAGAAGCAGCAACCAGATATACCACCTaGTGGGTGCACTTTACACCA +
Preference number: 4 (lower is better)
Translates to: GILLIKLSRPVHLCLEAATRYTT*WVHFTP
Trigger: TGGTGTAAAGTGCACCCATCAGGTGGTATATCTGGT...TGCTGCTTCTAGACAGAGGTGCACTGGACGGGATAGTTTTATCAAGAGAATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp TCTTGCCCTATCTGTGCAGGACAATCCCCTGTGGGCATTTCCCTGAACTGCTCCAAAGTGCATGTCACATaGAGTCATTATGGAAAAGAG +
Preference number: 4 (lower is better)
Translates to: SCPICAGQSPVGISLNCSKVHVT*SHYGKE
Trigger: CTCTTTTCCATAATGACTTCATGTGACATGCACTTT...GGAGCAGTTCAGGGAAATGCCCACAGGGGATTGTCCTGCACAGATAGGGCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp GGGATTCTCTTGATAAAACTATCCCGTCCAGTGCACCTCTGTCTAGAAGCAGCACCCCAAGTCCGGACATaGTGTATTCAGAGTCAGAAT +
Preference number: 4 (lower is better)
Translates to: GILLIKLSRPVHLCLEAAPQVRT*CIQSQN
Trigger: ATTCTGACTCTGAATACATCATGTCCGGACTTGGGG...TGCTGCTTCTAGACAGAGGTGCACTGGACGGGATAGTTTTATCAAGAGAATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp AAAATGAAGACCACTTTCCGTATTGTGGCAGTGATGCTGAGCTTCCTCAGAAAACACTGGGCTCCTGGCTaGTTCCACAGATTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: KMKTTFRIVAVMLSFLRKHWAPG*FHRLKQ
Trigger: CTGCTTCAATCTGTGGAATCAGCCAGGAGCCCAGTG...TTTTCTGAGGAAGCTCAGCATCACTGCCACAATACGGAAAGTGGTCTTCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp GGCAAAATTCTAGTTTCAAGAGGGCCATCCAATACTCCCACTTTAATGGAACAGTCACTCTGCCACGACTaGTTGTCCTGGAGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: GKILVSRGPSNTPTLMEQSLCHD*LSWSGK
Trigger: CTTCCCACTCCAGGACAAGCAGTCGTGGCAGAGTGA...CTGTTCCATTAAAGTGGGAGTATTGGATGGCCCTCTTGAAACTAGAATTTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp CAGGGGATACAGGAAGTACCACAATCAAAAAGTCATGTTTCATTCATACCTGGAGGCCTCATCTTCTTGTaGACCACCACCTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: QGIQEVPQSKSHVSFIPGGLIFL*TTTSCS
Trigger: GCTGCAGGAGGTGGTGGTGCACAAGAAGATGAGGCC...TCCAGGTATGAATGAAACATGACTTTTTGATTGTGGTACTTCCTGTATCCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp GGGATTCTCTTGATAAAACTATCCCGTCCAGTGCACCTCTGTCTAGAAGCAGCAGCTCAGCAGGGTTCCTaGATGTGTACGTTAAAAGTC +
Preference number: 4 (lower is better)
Translates to: GILLIKLSRPVHLCLEAAAQQGS*MCTLKV
Trigger: GACTTTTAACGTACACATGCAGGAACCCTGCTGAGC...TGCTGCTTCTAGACAGAGGTGCACTGGACGGGATAGTTTTATCAAGAGAATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp TTTGTACAGTTGAAAAATGGCATTGTTGTGGATTTGTGGTGTGGAACTGAAATCGCAATAGACGGCTTGTaGCCCTCGCCACGGCACCAG +
Preference number: 4 (lower is better)
Translates to: FVQLKNGIVVDLWCGTEIAIDGL*PSPRHQ
Trigger: CTGGTGCCGTGGCGAGGGCCACAAGCCGTCTATTGC...GATTTCAGTTCCACACCACAAATCCACAACAATGCCATTTTTCAACTGTACAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp CAGGGGATACAGGAAGTACCACAATCAAAAAGTCATGTTTCATTCATACCTGGAATGGTCACACAAAGCTaGGCCAGGCCCGGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: QGIQEVPQSKSHVSFIPGMVTQS*ARPGCF
Trigger: GAAACACCCGGGCCTGGCCCAGCTTTGTGTGACCAT...TCCAGGTATGAATGAAACATGACTTTTTGATTGTGGTACTTCCTGTATCCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp AAACTAATTTTTGACCTCAGAACCCTTTGTTCAACAGAAATCTCAGGAGGAAGCCAGCGAGGCAGGCCTTaGCAGACTCCACCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: KLIFDLRTLCSTEISGGSQRGRP*QTPPRK
Trigger: TTTCCTGGGTGGAGTCTGCCAAGGCCTGCCTCGCTG...GCTTCCTCCTGAGATTTCTGTTGAACAAAGGGTTCTGAGGTCAAAAATTAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp AAAATGAAGACCACTTTCCGTATTGTGGCAGTGATGCTGAGCTTCCTCAGAAAACCTGCTGAGGACCAATaGTCCCAGGAGAAAACCCAG +
Preference number: 4 (lower is better)
Translates to: KMKTTFRIVAVMLSFLRKPAEDQ*SQEKTQ
Trigger: CTGGGTTTTCTCCTGGGACCATTGGTCCTCAGCAGG...TTTTCTGAGGAAGCTCAGCATCACTGCCACAATACGGAAAGTGGTCTTCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp GGCAAAATTCTAGTTTCAAGAGGGCCATCCAATACTCCCACTTTAATGGAACAGCTGATGCCCCTGAAATaGGAATCAGGCGTGGCCATC +
Preference number: 4 (lower is better)
Translates to: GKILVSRGPSNTPTLMEQLMPLK*ESGVAI
Trigger: GATGGCCACGCCTGATTCCCATTTCAGGGGCATCAG...CTGTTCCATTAAAGTGGGAGTATTGGATGGCCCTCTTGAAACTAGAATTTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp CTCCTAGACCCATGCCCTATAAGGAGATCCCCCACCTTCTTCTTGCCATCAGAATACAGCAGTTGCTTTTaGGGCGAAGAGAGTGATAAA +
Preference number: 4 (lower is better)
Translates to: LLDPCPIRRSPTFFLPSEYSSCF*GEESDK
Trigger: TTTATCACTCTCTTCGCCCCAAAAGCAACTGCTGTA...TTCTGATGGCAAGAAGAAGGTGGGGGATCTCCTTATAGGGCATGGGTCTAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp GGCAAAATTCTAGTTTCAAGAGGGCCATCCAATACTCCCACTTTAATGGAACAGCTTTACACCACAGCATaGGGGGAAGAGTGGCCTGAA +
Preference number: 4 (lower is better)
Translates to: GKILVSRGPSNTPTLMEQLYTTA*GEEWPE
Trigger: TTCAGGCCACTCTTCCCCTCATGCTGTGGTGTAAAG...CTGTTCCATTAAAGTGGGAGTATTGGATGGCCCTCTTGAAACTAGAATTTTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp GGGATTCTCTTGATAAAACTATCCCGTCCAGTGCACCTCTGTCTAGAAGCAGCACAATCCACAAGAAGCTaGGCTGAATATCACTGTCCT +
Preference number: 4 (lower is better)
Translates to: GILLIKLSRPVHLCLEAAQSTRS*AEYHCP
Trigger: AGGACAGTGATATTCAGCTCAGCTTCTTGTGGATTG...TGCTGCTTCTAGACAGAGGTGCACTGGACGGGATAGTTTTATCAAGAGAATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp AAAATGAAGACCACTTTCCGTATTGTGGCAGTGATGCTGAGCTTCCTCAGAAAATCACTGGGAACACACTaGCCTTGTGTCCCATGGTCT +
Preference number: 4 (lower is better)
Translates to: KMKTTFRIVAVMLSFLRKSLGTH*PCVPWS
Trigger: AGACCATGGGACACAAGGTCAGTGTGTTCCCAGTGA...TTTTCTGAGGAAGCTCAGCATCACTGCCACAATACGGAAAGTGGTCTTCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp AAACTAATTTTTGACCTCAGAACCCTTTGTTCAACAGAAATCTCAGGAGGAAGCAGATGCCCAGGCATGTaGAGTGCCCCTCACACTGTG +
Preference number: 4 (lower is better)
Translates to: KLIFDLRTLCSTEISGGSRCPGM*SAPHTV
Trigger: CACAGTGTGAGGGGCACTGCACATGCCTGGGCATCT...GCTTCCTCCTGAGATTTCTGTTGAACAAAGGGTTCTGAGGTCAAAAATTAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp TCTTGCCCTATCTGTGCAGGACAATCCCCTGTGGGCATTTCCCTGAACTGCTCCTGTGTTACCAATAGATaGTGGAAACTTTATACTGCA +
Preference number: 4 (lower is better)
Translates to: SCPICAGQSPVGISLNCSCVTNR*WKLYTA
Trigger: TGCAGTATAAAGTTTCCAGCATCTATTGGTAACACA...GGAGCAGTTCAGGGAAATGCCCACAGGGGATTGTCCTGCACAGATAGGGCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp CTCCTAGACCCATGCCCTATAAGGAGATCCCCCACCTTCTTCTTGCCATCAGAATCTTTGGAACTAATTTaGGTGCAAGACCAGCCAATT +
Preference number: 4 (lower is better)
Translates to: LLDPCPIRRSPTFFLPSESLELI*VQDQPI
Trigger: AATTGGCTGGTCTTGCACGCAAATTAGTTCCAAAGA...TTCTGATGGCAAGAAGAAGGTGGGGGATCTCCTTATAGGGCATGGGTCTAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp GAAAAGGCACGCAGGCCTGACCTGTCTGTACTGTGTCTTGACCGCAAAGTCCCATTCAGATGCGGTGACTaGTGGTTAATTAAACTTTTT +
Preference number: 4 (lower is better)
Translates to: EKARRPDLSVLCLDRKVPFRCGD*WLIKLF
Trigger: AAAAAGTTTAATTAACCAGCAGTCACCGCATCTGAA...TGGGACTTTGCGGTCAAGACACAGTACAGACAGGTCAGGCCTGCGTGCCTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp TTTGTACAGTTGAAAAATGGCATTGTTGTGGATTTGTGGTGTGGAACTGAAATCGAACCGAGTCCAAAATaGCTCCTGAGCGGCGGCCAC +
Preference number: 4 (lower is better)
Translates to: FVQLKNGIVVDLWCGTEIEPSPK*LLSGGH
Trigger: GTGGCCGCCGCTCAGGAGCCATTTTGGACTCGGTTC...GATTTCAGTTCCACACCACAAATCCACAACAATGCCATTTTTCAACTGTACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp AAACTAATTTTTGACCTCAGAACCCTTTGTTCAACAGAAATCTCAGGAGGAAGCTCCGTGGGTGTCCCCTaGAGGTTTCCCTGGCTCAAA +
Preference number: 4 (lower is better)
Translates to: KLIFDLRTLCSTEISGGSSVGVP*RFPWLK
Trigger: TTTGAGCCAGGGAAACCTCCAGGGGACACCCACGGA...GCTTCCTCCTGAGATTTCTGTTGAACAAAGGGTTCTGAGGTCAAAAATTAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp GGGATTCTCTTGATAAAACTATCCCGTCCAGTGCACCTCTGTCTAGAAGCAGCAGAGGAAACGAGAATGTaGCCAACTGAAGAGAAAGGT +
Preference number: 4 (lower is better)
Translates to: GILLIKLSRPVHLCLEAAEETRM*PTEEKG
Trigger: ACCTTTCTCTTCAGTTGGCCACATTCTCGTTTCCTC...TGCTGCTTCTAGACAGAGGTGCACTGGACGGGATAGTTTTATCAAGAGAATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp GGCCTGACCTGTCTGTACTGTGTCTTGACCGCAAAGTCCCACACCAGAACCATGCATCAACTGAATTACTaGGCCTGTTTATCTAAAACA +
Preference number: 4 (lower is better)
Translates to: GLTCLYCVLTAKSHTRTMHQLNY*ACLSKT
Trigger: TGTTTTAGATAAACAGGCCCAGTAATTCAGTTGATG...CATGGTTCTGGTGTGGGACTTTGCGGTCAAGACACAGTACAGACAGGTCAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR CAA 72 bp AGAATATGTACCACTTTAAGGGGTCTGGAGAAAGTCTaGTCCACGAGCCACAGAACGGGGACAGTAATGTCA +
Preference number: 4 (lower is better)
Translates to: RICTTLRGLEKV*STSHRTGTVMS
Trigger: TGACATTACTGTCCCCGTTCTGTGGCTCGTGGACAAGACTTTCTCCAGACCCCTTAAAGTGGTACATATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp GGCAAAATTCTAGTTTCAAGAGGGCCATCCAATACTCCCACTTTAATGGAACAGCCTCTGGCAAATGAGTaGAGCGTTCGTTGCAGAAGT +
Preference number: 4 (lower is better)
Translates to: GKILVSRGPSNTPTLMEQPLANE*SVRCRS
Trigger: ACTTCTGCAACGAACGCTTCACTCATTTGCCAGAGG...CTGTTCCATTAAAGTGGGAGTATTGGATGGCCCTCTTGAAACTAGAATTTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp AAACTAATTTTTGACCTCAGAACCCTTTGTTCAACAGAAATCTCAGGAGGAAGCACTGCCCTAGAGAAATaGAGGCAGTGCAGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: KLIFDLRTLCSTEISGGSTALEK*RQCRAH
Trigger: ATGGGCCCTGCACTGCCTTCATTTCTCTAGGGCAGT...GCTTCCTCCTGAGATTTCTGTTGAACAAAGGGTTCTGAGGTCAAAAATTAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp AAACTAATTTTTGACCTCAGAACCCTTTGTTCAACAGAAATCTCAGGAGGAAGCATCTCCCGTTCACTCTaGCACGACTGCTTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: KLIFDLRTLCSTEISGGSISRSL*HDCLSW
Trigger: CCAGGACAAGCAGTCGTGGCAGAGTGAACGGGAGAT...GCTTCCTCCTGAGATTTCTGTTGAACAAAGGGTTCTGAGGTCAAAAATTAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp CAGGGGATACAGGAAGTACCACAATCAAAAAGTCATGTTTCATTCATACCTGGATGTAGCAGGTTCTCGTaGTTCATGCCAGGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: QGIQEVPQSKSHVSFIPGCSRFS*FMPGVL
Trigger: CAGCACACCTGGCATGAAGCACGAGAACCTGCTACA...TCCAGGTATGAATGAAACATGACTTTTTGATTGTGGTACTTCCTGTATCCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp AAAATGAAGACCACTTTCCGTATTGTGGCAGTGATGCTGAGCTTCCTCAGAAAACTCCATACTAAAGGATaGTGCTCCGAATGTGCCCGA +
Preference number: 4 (lower is better)
Translates to: KMKTTFRIVAVMLSFLRKLHTKG*CSECAR
Trigger: TCGGGCACATTCGGAGCAGCATCCTTTAGTATGGAG...TTTTCTGAGGAAGCTCAGCATCACTGCCACAATACGGAAAGTGGTCTTCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp AAACTAATTTTTGACCTCAGAACCCTTTGTTCAACAGAAATCTCAGGAGGAAGCTCCCATAGCACCCTGTaGCCCAACACCCAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: KLIFDLRTLCSTEISGGSSHSTL*PNTQRK
Trigger: TTTCCTCTGGGTGTTGGGGCACAGGGTGCTATGGGA...GCTTCCTCCTGAGATTTCTGTTGAACAAAGGGTTCTGAGGTCAAAAATTAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp AAACTAATTTTTGACCTCAGAACCCTTTGTTCAACAGAAATCTCAGGAGGAAGCGTGCTCCTAGACCCATaGCCTATAAGGAGATCCCCC +
Preference number: 4 (lower is better)
Translates to: KLIFDLRTLCSTEISGGSVLLDP*PIRRSP
Trigger: GGGGGATCTCCTTATAGGGCATGGGTCTAGGAGCAC...GCTTCCTCCTGAGATTTCTGTTGAACAAAGGGTTCTGAGGTCAAAAATTAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp AGGGCTGCACCCAATCTCAGACTTTCTCCAAACCCCGCTCTTGCTGTTAATGCTCAGGACTGGCCATTATaGATACCAGAAATTAACTTA +
Preference number: 4 (lower is better)
Translates to: RAAPNLRLSPNPALAVNAQDWPL*IPEINL
Trigger: TAAGTTAATTTCTGGTATGCATAATGGCCAGTCCTG...AGCATTAACAGCAAGAGCGGGGTTTGGAGAAAGTCTGAGATTGGGTGCAGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp CTCCTAGACCCATGCCCTATAAGGAGATCCCCCACCTTCTTCTTGCCATCAGAACCAATTAAATCGCTTTaGCTATTCAGACACACAAGA +
Preference number: 4 (lower is better)
Translates to: LLDPCPIRRSPTFFLPSEPIKSL*LFRHTR
Trigger: TCTTGTGTGTCTGAATAGGCAAAGCGATTTAATTGG...TTCTGATGGCAAGAAGAAGGTGGGGGATCTCCTTATAGGGCATGGGTCTAGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp AGGGCTGCACCCAATCTCAGACTTTCTCCAAACCCCGCTCTTGCTGTTAATGCTAGACAAAAATTCAGATaGGGTGACTGCTGGTTAATT +
Preference number: 4 (lower is better)
Translates to: RAAPNLRLSPNPALAVNARQKFR*GDCWLI
Trigger: AATTAACCAGCAGTCACCGCATCTGAATTTTTGTCT...AGCATTAACAGCAAGAGCGGGGTTTGGAGAAAGTCTGAGATTGGGTGCAGCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp GGGATTCTCTTGATAAAACTATCCCGTCCAGTGCACCTCTGTCTAGAAGCAGCATCTCTAATAATCACTTaGTCCCAGTCGGCCTTTCAT +
Preference number: 4 (lower is better)
Translates to: GILLIKLSRPVHLCLEAASLIIT*SQSAFH
Trigger: ATGAAAGGCCGACTGGGAGCAAGTGATTATTAGAGA...TGCTGCTTCTAGACAGAGGTGCACTGGACGGGATAGTTTTATCAAGAGAATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp AAACTAATTTTTGACCTCAGAACCCTTTGTTCAACAGAAATCTCAGGAGGAAGCAGTAATGTCACCACCTaGGGCGGAACCAGAGGTGCA +
Preference number: 4 (lower is better)
Translates to: KLIFDLRTLCSTEISGGSSNVTT*GGTRGA
Trigger: TGCACCTCTGGTTCCGCCCCAGGTGGTGACATTACT...GCTTCCTCCTGAGATTTCTGTTGAACAAAGGGTTCTGAGGTCAAAAATTAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp GGCAAAATTCTAGTTTCAAGAGGGCCATCCAATACTCCCACTTTAATGGAACAGAATGGGAATCAGGCGTaGCCATCTCTCCAAAGGTGT +
Preference number: 4 (lower is better)
Translates to: GKILVSRGPSNTPTLMEQNGNQA*PSLQRC
Trigger: ACACCTTTGGAGAGATGGCCACGCCTGATTCCCATT...CTGTTCCATTAAAGTGGGAGTATTGGATGGCCCTCTTGAAACTAGAATTTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp GGGATTCTCTTGATAAAACTATCCCGTCCAGTGCACCTCTGTCTAGAAGCAGCATGCTTTAGTGCCCTGTaGTTGGTTTACAGTAGTTCT +
Preference number: 4 (lower is better)
Translates to: GILLIKLSRPVHLCLEAACFSAL*LVYSSS
Trigger: AGAACTACTGTAAACCAACCACAGGGCACTAAAGCA...TGCTGCTTCTAGACAGAGGTGCACTGGACGGGATAGTTTTATCAAGAGAATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp AGGGCTGCACCCAATCTCAGACTTTCTCCAAACCCCGCTCTTGCTGTTAATGCTCCTTTCTTCAGTCCTTaGGAAGAGTTTTGCTTTAAA +
Preference number: 4 (lower is better)
Translates to: RAAPNLRLSPNPALAVNAPFFSP*EEFCFK
Trigger: TTTAAAGCAAAACTCTTCCCAAGGACTGAAGAAAGG...AGCATTAACAGCAAGAGCGGGGTTTGGAGAAAGTCTGAGATTGGGTGCAGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp GGGATTCTCTTGATAAAACTATCCCGTCCAGTGCACCTCTGTCTAGAAGCAGCAGGTGACATTTTCTGTTaGTTCCAAAACTGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: GILLIKLSRPVHLCLEAAGDIFC*FQNCSC
Trigger: GCAGGAACAGTTTTGGAACCAACAGAAAATGTCACC...TGCTGCTTCTAGACAGAGGTGCACTGGACGGGATAGTTTTATCAAGAGAATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp GGGATTCTCTTGATAAAACTATCCCGTCCAGTGCACCTCTGTCTAGAAGCAGCATGTCATTCTGAACACTaGCCGATCAAGTTACATGTT +
Preference number: 4 (lower is better)
Translates to: GILLIKLSRPVHLCLEAACHSEH*PIKLHV
Trigger: AACATGTAACTTGATCGGTCAGTGTTCAGAATGACA...TGCTGCTTCTAGACAGAGGTGCACTGGACGGGATAGTTTTATCAAGAGAATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp AAAATGAAGACCACTTTCCGTATTGTGGCAGTGATGCTGAGCTTCCTCAGAAAAAGCCCAACTACAGGATaGAGTGCTTTGCTGTCTAAG +
Preference number: 4 (lower is better)
Translates to: KMKTTFRIVAVMLSFLRKSPTTG*SALLSK
Trigger: CTTAGACAGCAAAGCACTTCATCCTGTAGTTGGGCT...TTTTCTGAGGAAGCTCAGCATCACTGCCACAATACGGAAAGTGGTCTTCATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp GGCAAAATTCTAGTTTCAAGAGGGCCATCCAATACTCCCACTTTAATGGAACAGCCCAACCATTCTCACTaGCCAGAGAGGACAAAATGT +
Preference number: 4 (lower is better)
Translates to: GKILVSRGPSNTPTLMEQPNHSH*PERTKC
Trigger: ACATTTTGTCCTCTCTGGTCAGTGAGAATGGTTGGG...CTGTTCCATTAAAGTGGGAGTATTGGATGGCCCTCTTGAAACTAGAATTTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp CATGACCTAACTATTCCTGCAGTAAATTTGCTACATTTGTTAGTCGTTTGTTTCTTGATCTCCAGCAGCTaGAGTGGCTTCAGGCCCACC +
Preference number: 4 (lower is better)
Translates to: HDLTIPAVNLLHLLVVCFLISSS*SGFRPT
Trigger: GGTGGGCCTGAAGCCACTGCAGCTGCTGGAGATCAA...GAAACAAACGACTAACAAATGTAGCAAATTTACTGCAGGAATAGTTAGGTCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp AAAATGAAGACCACTTTCCGTATTGTGGCAGTGATGCTGAGCTTCCTCAGAAAAACAACCTCCTTTTTCTaGAGAAACACCCCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: KMKTTFRIVAVMLSFLRKTTSFF*RNTPKS
Trigger: GGACTTGGGGGTGTTTCTGCAGAAAAAGGAGGTTGT...TTTTCTGAGGAAGCTCAGCATCACTGCCACAATACGGAAAGTGGTCTTCATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp AAAATGAAGACCACTTTCCGTATTGTGGCAGTGATGCTGAGCTTCCTCAGAAAACAATGTAAAACACATTaGAGGCCCTCTCTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: KMKTTFRIVAVMLSFLRKQCKTH*RPSLLP
Trigger: TGGGAGGAGAGAGGGCCTGCAATGTGTTTTACATTG...TTTTCTGAGGAAGCTCAGCATCACTGCCACAATACGGAAAGTGGTCTTCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp TTTGTACAGTTGAAAAATGGCATTGTTGTGGATTTGTGGTGTGGAACTGAAATCCCCATCCCACCACAATaGCATGACGAGCTTGCCAGA +
Preference number: 4 (lower is better)
Translates to: FVQLKNGIVVDLWCGTEIPIPPQ*HDELAR
Trigger: TCTGGCAAGCTCGTCATGGCATTGTGGTGGGATGGG...GATTTCAGTTCCACACCACAAATCCACAACAATGCCATTTTTCAACTGTACAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp CAGGGGATACAGGAAGTACCACAATCAAAAAGTCATGTTTCATTCATACCTGGACTTAACTCGTGGCAGTaGTCTGAGAAAACCCCACTC +
Preference number: 4 (lower is better)
Translates to: QGIQEVPQSKSHVSFIPGLNSWQ*SEKTPL
Trigger: GAGTGGGGTTTTCTCAGAGCACTGCCACGAGTTAAG...TCCAGGTATGAATGAAACATGACTTTTTGATTGTGGTACTTCCTGTATCCCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp CATGACCTAACTATTCCTGCAGTAAATTTGCTACATTTGTTAGTCGTTTGTTTCAGGGAGCCCTTGTCATaGAAGGCCGTGATGAGCCAC +
Preference number: 4 (lower is better)
Translates to: HDLTIPAVNLLHLLVVCFREPLS*KAVMSH
Trigger: GTGGCTCATCACGGCCTTCCATGACAAGGGCTCCCT...GAAACAAACGACTAACAAATGTAGCAAATTTACTGCAGGAATAGTTAGGTCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR CAA 72 bp AAAGAGTGGTGTGTACATTGCTTTAGTGCCCTGTGGTaGGTTTACAGTAGTTCTCAGAATTACCTAGGCCCT +
Preference number: 4 (lower is better)
Translates to: KEWCVHCFSALW*VYSSSQNYLGP
Trigger: AGGGCCTAGGTAATTCTGAGAACTACTGTAAACCAACCACAGGGCACTAAAGCAATGTACACACCACTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp CATGACCTAACTATTCCTGCAGTAAATTTGCTACATTTGTTAGTCGTTTGTTTCGCAGGTCCACATTGGTaGCAGAGGTCACCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: HDLTIPAVNLLHLLVVCFAGPHW*QRSPGK
Trigger: TTTCCCTGGTGACCTCTGTCACCAATGTGGACCTGC...GAAACAAACGACTAACAAATGTAGCAAATTTACTGCAGGAATAGTTAGGTCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp CATGACCTAACTATTCCTGCAGTAAATTTGCTACATTTGTTAGTCGTTTGTTTCTCTGTGGCCTGGAGATaGGAGACCCTTCCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: HDLTIPAVNLLHLLVVCFSVAWR*ETLPFA
Trigger: AGCAAAGGGAAGGGTCTCTCATCTCCAGGCCACAGA...GAAACAAACGACTAACAAATGTAGCAAATTTACTGCAGGAATAGTTAGGTCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp AAAATGAAGACCACTTTCCGTATTGTGGCAGTGATGCTGAGCTTCCTCAGAAAAAACTCTGGAGCTATCTaGAAGATGCTCTGCTGTTAC +
Preference number: 4 (lower is better)
Translates to: KMKTTFRIVAVMLSFLRKNSGAI*KMLCCY
Trigger: GTAACAGCAGAGCATCTTTCAGATAGCTCCAGAGTT...TTTTCTGAGGAAGCTCAGCATCACTGCCACAATACGGAAAGTGGTCTTCATTTT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp GGCAAAATTCTAGTTTCAAGAGGGCCATCCAATACTCCCACTTTAATGGAACAGGGCATTTCCCTGAACTaGTCCAAGAGGAAACAAAAG +
Preference number: 4 (lower is better)
Translates to: GKILVSRGPSNTPTLMEQGISLN*SKRKQK
Trigger: CTTTTGTTTCCTCTTGGAGCAGTTCAGGGAAATGCC...CTGTTCCATTAAAGTGGGAGTATTGGATGGCCCTCTTGAAACTAGAATTTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp AAACTAATTTTTGACCTCAGAACCCTTTGTTCAACAGAAATCTCAGGAGGAAGCCCCAGGAAATCCTCTTaGCCTATCTGTGCAGGACAA +
Preference number: 4 (lower is better)
Translates to: KLIFDLRTLCSTEISGGSPRKSS*PICAGQ
Trigger: TTGTCCTGCACAGATAGGGCAAGAGGATTTCCTGGG...GCTTCCTCCTGAGATTTCTGTTGAACAAAGGGTTCTGAGGTCAAAAATTAGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp AAAATGAAGACCACTTTCCGTATTGTGGCAGTGATGCTGAGCTTCCTCAGAAAAAGGACAAGAAGGCCATaGTGGACAACAAAGGCTAAT +
Preference number: 4 (lower is better)
Translates to: KMKTTFRIVAVMLSFLRKRTRRP*WTTKAN
Trigger: ATTAGCCTTTGTTGTCCAGCATGGCCTTCTTGTCCT...TTTTCTGAGGAAGCTCAGCATCACTGCCACAATACGGAAAGTGGTCTTCATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp CAGGGGATACAGGAAGTACCACAATCAAAAAGTCATGTTTCATTCATACCTGGAGAGTGGTGTGTACATTaGTTTAGTGCCCTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: QGIQEVPQSKSHVSFIPGEWCVH*FSALWL
Trigger: CAACCACAGGGCACTAAAGCAATGTACACACCACTC...TCCAGGTATGAATGAAACATGACTTTTTGATTGTGGTACTTCCTGTATCCCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp GGCAAAATTCTAGTTTCAAGAGGGCCATCCAATACTCCCACTTTAATGGAACAGAGAGAGGACAAAATGTaGCTGGCAGCTCTCCATTTA +
Preference number: 4 (lower is better)
Translates to: GKILVSRGPSNTPTLMEQREDKM*LAALHL
Trigger: TAAATGGAGAGCTGCCAGGCACATTTTGTCCTCTCT...CTGTTCCATTAAAGTGGGAGTATTGGATGGCCCTCTTGAAACTAGAATTTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp AAACTAATTTTTGACCTCAGAACCCTTTGTTCAACAGAAATCTCAGGAGGAAGCCTGCTTGTCCTGGAGTaGGAAGATCTTGACAGCTAC +
Preference number: 4 (lower is better)
Translates to: KLIFDLRTLCSTEISGGSLLVLE*EDLDSY
Trigger: GTAGCTGTCAAGATCTTCCCACTCCAGGACAAGCAG...GCTTCCTCCTGAGATTTCTGTTGAACAAAGGGTTCTGAGGTCAAAAATTAGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp TTTGTACAGTTGAAAAATGGCATTGTTGTGGATTTGTGGTGTGGAACTGAAATCAGAGTCAGAATCAGCTaGCACGTGTGGGTATGCCCT +
Preference number: 4 (lower is better)
Translates to: FVQLKNGIVVDLWCGTEIRVRIS*HVWVCP
Trigger: AGGGCATACCCACACGTGCCAGCTGATTCTGACTCT...GATTTCAGTTCCACACCACAAATCCACAACAATGCCATTTTTCAACTGTACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp GGGATTCTCTTGATAAAACTATCCCGTCCAGTGCACCTCTGTCTAGAAGCAGCATTAGATAATTCAGTCTaGTGGATTACTCAAACCACC +
Preference number: 4 (lower is better)
Translates to: GILLIKLSRPVHLCLEAALDNSV*WITQTT
Trigger: GGTGGTTTGAGTAATCCACCAGACTGAATTATCTAA...TGCTGCTTCTAGACAGAGGTGCACTGGACGGGATAGTTTTATCAAGAGAATCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp AAAATGAAGACCACTTTCCGTATTGTGGCAGTGATGCTGAGCTTCCTCAGAAAAAAGAAACCAATTATCTaGGCCCACCAAAAGTGCATG +
Preference number: 4 (lower is better)
Translates to: KMKTTFRIVAVMLSFLRKKKPII*AHQKCM
Trigger: CATGCACTTTTGGTGGGCTCAGATAATTGGTTTCTT...TTTTCTGAGGAAGCTCAGCATCACTGCCACAATACGGAAAGTGGTCTTCATTTT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp AAAATGAAGACCACTTTCCGTATTGTGGCAGTGATGCTGAGCTTCCTCAGAAAAATTCTGACGCAAACATaGTTAGGAGAGTCAGGGAAT +
Preference number: 4 (lower is better)
Translates to: KMKTTFRIVAVMLSFLRKILTQT*LGESGN
Trigger: ATTCCCTGACTCTCCTAATCATGTTTGCGTCAGAAT...TTTTCTGAGGAAGCTCAGCATCACTGCCACAATACGGAAAGTGGTCTTCATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp AAAATGAAGACCACTTTCCGTATTGTGGCAGTGATGCTGAGCTTCCTCAGAAAACCTCTAGGTAGAGTTTaGAGCATTAGGTTTCCTAAG +
Preference number: 4 (lower is better)
Translates to: KMKTTFRIVAVMLSFLRKPLGRV*SIRFPK
Trigger: CTTAGGAAACCTAATGCTGCAAACTCTACCTAGAGG...TTTTCTGAGGAAGCTCAGCATCACTGCCACAATACGGAAAGTGGTCTTCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp GGCAAAATTCTAGTTTCAAGAGGGCCATCCAATACTCCCACTTTAATGGAACAGGTAAAGAAAAGCAACTaGTGTAAGGCCTGTTTTGCC +
Preference number: 4 (lower is better)
Translates to: GKILVSRGPSNTPTLMEQVKKSN*CKACFA
Trigger: GGCAAAACAGGCCTTACAGCAGTTGCTTTTCTTTAC...CTGTTCCATTAAAGTGGGAGTATTGGATGGCCCTCTTGAAACTAGAATTTTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp CATGACCTAACTATTCCTGCAGTAAATTTGCTACATTTGTTAGTCGTTTGTTTCGCTCCAGCTCCCAGTTaGCGTTGTAGTAGATGCACT +
Preference number: 4 (lower is better)
Translates to: HDLTIPAVNLLHLLVVCFAPAPS*RCSRCT
Trigger: AGTGCATCTACTACAACGCCAACTGGGAGCTGGAGC...GAAACAAACGACTAACAAATGTAGCAAATTTACTGCAGGAATAGTTAGGTCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp TTTGTACAGTTGAAAAATGGCATTGTTGTGGATTTGTGGTGTGGAACTGAAATCAAGCAGGGCTCGAGATaGCTCACTCCTCAAAGAACA +
Preference number: 4 (lower is better)
Translates to: FVQLKNGIVVDLWCGTEIKQGSR*LTPQRT
Trigger: TGTTCTTTGAGGAGTGAGCCATCTCGAGCCCTGCTT...GATTTCAGTTCCACACCACAAATCCACAACAATGCCATTTTTCAACTGTACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp AAACTAATTTTTGACCTCAGAACCCTTTGTTCAACAGAAATCTCAGGAGGAAGCTTTATGGGGAACAGATaGGGTTGGTTTCTGGAGTGC +
Preference number: 4 (lower is better)
Translates to: KLIFDLRTLCSTEISGGSFMGNR*GWFLEC
Trigger: GCACTCCAGAAACCAACCCCATCTGTTCCCCATAAA...GCTTCCTCCTGAGATTTCTGTTGAACAAAGGGTTCTGAGGTCAAAAATTAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR CAA 72 bp ATAATCACTTGCTCCCAGTCGGCCTTTCATGATGACTaGGACACTTTTCAAGTTAAAACTCAGATGTTGCCT +
Preference number: 4 (lower is better)
Translates to: IITCSQSAFHDD*DTFQVKTQMLP
Trigger: AGGCAACATCTGAGTTTTAACTTGAAAAGTGTCCAAGTCATCATGAAAGGCCGACTGGGAGCAAGTGATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp TTTGTACAGTTGAAAAATGGCATTGTTGTGGATTTGTGGTGTGGAACTGAAATCATCGTCTCTGCTACATaGCACAGTTCGTTCCATGTG +
Preference number: 4 (lower is better)
Translates to: FVQLKNGIVVDLWCGTEIIVSAT*HSSFHV
Trigger: CACATGGAACGAACTGTGTCATGTAGCAGAGACGAT...GATTTCAGTTCCACACCACAAATCCACAACAATGCCATTTTTCAACTGTACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp GGCAAAATTCTAGTTTCAAGAGGGCCATCCAATACTCCCACTTTAATGGAACAGGGAATGTTCTACATTTaGGCATTAGCGACTGGAAAT +
Preference number: 4 (lower is better)
Translates to: GKILVSRGPSNTPTLMEQGMFYI*ALATGN
Trigger: ATTTCCAGTCGCTAATGCTCAAATGTAGAACATTCC...CTGTTCCATTAAAGTGGGAGTATTGGATGGCCCTCTTGAAACTAGAATTTTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp GGCAAAATTCTAGTTTCAAGAGGGCCATCCAATACTCCCACTTTAATGGAACAGCGTGAAAGACACATCTaGTGTTTCTTAAGCTCACTA +
Preference number: 4 (lower is better)
Translates to: GKILVSRGPSNTPTLMEQRERHI*CFLSSL
Trigger: TAGTGAGCTTAAGAAACAGCAGATGTGTCTTTCACG...CTGTTCCATTAAAGTGGGAGTATTGGATGGCCCTCTTGAAACTAGAATTTTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp GGCAAAATTCTAGTTTCAAGAGGGCCATCCAATACTCCCACTTTAATGGAACAGTCAAGACAGAACTCATaGATTTGCAAGAAGACCCAT +
Preference number: 4 (lower is better)
Translates to: GKILVSRGPSNTPTLMEQSRQNS*ICKKTH
Trigger: ATGGGTCTTCTTGCAAATGCATGAGTTCTGTCTTGA...CTGTTCCATTAAAGTGGGAGTATTGGATGGCCCTCTTGAAACTAGAATTTTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp TTTGTACAGTTGAAAAATGGCATTGTTGTGGATTTGTGGTGTGGAACTGAAATCCAAAGCATAGCAGGATaGAGGAAACGAGAATGTGGC +
Preference number: 4 (lower is better)
Translates to: FVQLKNGIVVDLWCGTEIQSIAG*RKRECG
Trigger: GCCACATTCTCGTTTCCTCCATCCTGCTATGCTTTG...GATTTCAGTTCCACACCACAAATCCACAACAATGCCATTTTTCAACTGTACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp TTTGTACAGTTGAAAAATGGCATTGTTGTGGATTTGTGGTGTGGAACTGAAATCTGGACTTTTCTTTGTTaGCAGGCCTTTTGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: FVQLKNGIVVDLWCGTEIWTFLC*QAFWSH
Trigger: GTGGCTCCAAAAGGCCTGCCAACAAAGAAAAGTCCA...GATTTCAGTTCCACACCACAAATCCACAACAATGCCATTTTTCAACTGTACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp GGCAAAATTCTAGTTTCAAGAGGGCCATCCAATACTCCCACTTTAATGGAACAGGATAATTCAGTCTGGTaGATTACTCAAACCACCAGA +
Preference number: 4 (lower is better)
Translates to: GKILVSRGPSNTPTLMEQDNSVW*ITQTTR
Trigger: TCTGGTGGTTTGAGTAATCCACCAGACTGAATTATC...CTGTTCCATTAAAGTGGGAGTATTGGATGGCCCTCTTGAAACTAGAATTTTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp CAGGGGATACAGGAAGTACCACAATCAAAAAGTCATGTTTCATTCATACCTGGAAGCTCTCCATTTAATTaGATCACTGCATCCACATGC +
Preference number: 4 (lower is better)
Translates to: QGIQEVPQSKSHVSFIPGSSPFN*ITASTC
Trigger: GCATGTGGATGCAGTGATCCAATTAAATGGAGAGCT...TCCAGGTATGAATGAAACATGACTTTTTGATTGTGGTACTTCCTGTATCCCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp GGCAAAATTCTAGTTTCAAGAGGGCCATCCAATACTCCCACTTTAATGGAACAGTTTTCCTCCTATTGTTaGGGTGTAACTGCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: GKILVSRGPSNTPTLMEQFSSYC*GVTASS
Trigger: TGAAGAAGCAGTTACACCCCAACAATAGGAGGAAAA...CTGTTCCATTAAAGTGGGAGTATTGGATGGCCCTCTTGAAACTAGAATTTTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp TTTGTACAGTTGAAAAATGGCATTGTTGTGGATTTGTGGTGTGGAACTGAAATCGGAGTGGGAAGATCTTaGCAGCTACAAAGTCATTCA +
Preference number: 4 (lower is better)
Translates to: FVQLKNGIVVDLWCGTEIGVGRS*QLQSHS
Trigger: TGAATGACTTTGTAGCTGTCAAGATCTTCCCACTCC...GATTTCAGTTCCACACCACAAATCCACAACAATGCCATTTTTCAACTGTACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp CATGACCTAACTATTCCTGCAGTAAATTTGCTACATTTGTTAGTCGTTTGTTTCAGGATGAAGGGTAGATaGCTAGATTCACGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: HDLTIPAVNLLHLLVVCFRMKGR*LDSRSF
Trigger: GAAGCTCCGTGAATCTAGTCATCTACCCTTCATCCT...GAAACAAACGACTAACAAATGTAGCAAATTTACTGCAGGAATAGTTAGGTCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp AAACTAATTTTTGACCTCAGAACCCTTTGTTCAACAGAAATCTCAGGAGGAAGCTACGCTCAACCAGAATaGATAAAAAGCACAGCTGGT +
Preference number: 4 (lower is better)
Translates to: KLIFDLRTLCSTEISGGSYAQPE*IKSTAG
Trigger: ACCAGCTGTGCTTTTTATTCATTCTGGTTGAGCGTA...GCTTCCTCCTGAGATTTCTGTTGAACAAAGGGTTCTGAGGTCAAAAATTAGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp TTTGTACAGTTGAAAAATGGCATTGTTGTGGATTTGTGGTGTGGAACTGAAATCAACAAACACTTAAGATaGCTGACTTGGGACCCTCAC +
Preference number: 4 (lower is better)
Translates to: FVQLKNGIVVDLWCGTEINKHLR*LTWDPH
Trigger: GTGAGGGTCCCAAGTCAGTCATCTTAAGTGTTTGTT...GATTTCAGTTCCACACCACAAATCCACAACAATGCCATTTTTCAACTGTACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp CATGACCTAACTATTCCTGCAGTAAATTTGCTACATTTGTTAGTCGTTTGTTTCCCCCCACCTTCTTCTTaGCATCAGAACCAGATATAC +
Preference number: 4 (lower is better)
Translates to: HDLTIPAVNLLHLLVVCFPPPSS*HQNQIY
Trigger: GTATATCTGGTTCTGATGGCAAGAAGAAGGTGGGGG...GAAACAAACGACTAACAAATGTAGCAAATTTACTGCAGGAATAGTTAGGTCATG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp CAGGGGATACAGGAAGTACCACAATCAAAAAGTCATGTTTCATTCATACCTGGAAATATATTTCTACTCTaGGGTAACCCTCTCCCTCAA +
Preference number: 4 (lower is better)
Translates to: QGIQEVPQSKSHVSFIPGNIFLL*GNPLPQ
Trigger: TTGAGGGAGAGGGTTACCGCAGAGTAGAAATATATT...TCCAGGTATGAATGAAACATGACTTTTTGATTGTGGTACTTCCTGTATCCCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp GGCAAAATTCTAGTTTCAAGAGGGCCATCCAATACTCCCACTTTAATGGAACAGTTGAAAGAGCTTCCTTaGTTCTACAGCCTTAAATCA +
Preference number: 4 (lower is better)
Translates to: GKILVSRGPSNTPTLMEQLKELP*FYSLKS
Trigger: TGATTTAAGGCTGTAGAAGCAAGGAAGCTCTTTCAA...CTGTTCCATTAAAGTGGGAGTATTGGATGGCCCTCTTGAAACTAGAATTTTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp AAACTAATTTTTGACCTCAGAACCCTTTGTTCAACAGAAATCTCAGGAGGAAGCTATTTGAGGACCCAGTaGAGAGTTCAAGCAGCAAAA +
Preference number: 4 (lower is better)
Translates to: KLIFDLRTLCSTEISGGSYLRTQ*RVQAAK
Trigger: TTTTGCTGCTTGAACTCTGCACTGGGTCCTCAAATA...GCTTCCTCCTGAGATTTCTGTTGAACAAAGGGTTCTGAGGTCAAAAATTAGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp AAACTAATTTTTGACCTCAGAACCCTTTGTTCAACAGAAATCTCAGGAGGAAGCTTAGTGCCCTGTGGTTaGTTTACAGTAGTTCTCAGA +
Preference number: 4 (lower is better)
Translates to: KLIFDLRTLCSTEISGGSLVPCG*FTVVLR
Trigger: TCTGAGAACTACTGTAAACCAACCACAGGGCACTAA...GCTTCCTCCTGAGATTTCTGTTGAACAAAGGGTTCTGAGGTCAAAAATTAGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp TTTGTACAGTTGAAAAATGGCATTGTTGTGGATTTGTGGTGTGGAACTGAAATCCATGTGAATTACATGTaGAGCTCCAAACAACCCAAG +
Preference number: 4 (lower is better)
Translates to: FVQLKNGIVVDLWCGTEIHVNYM*SSKQPK
Trigger: CTTGGGTTGTTTGGAGCTTCACATGTAATTCACATG...GATTTCAGTTCCACACCACAAATCCACAACAATGCCATTTTTCAACTGTACAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp CAGGGGATACAGGAAGTACCACAATCAAAAAGTCATGTTTCATTCATACCTGGAGTTACATGTTACATGTaGATTACATGTGAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: QGIQEVPQSKSHVSFIPGVTCYM*ITCEAP
Trigger: TGGAGCTTCACATGTAATTCACATGTAACATGTAAC...TCCAGGTATGAATGAAACATGACTTTTTGATTGTGGTACTTCCTGTATCCCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp TTTGTACAGTTGAAAAATGGCATTGTTGTGGATTTGTGGTGTGGAACTGAAATCGGTTACTTGTCATTCTaGACACTGACCGATCAAGTT +
Preference number: 4 (lower is better)
Translates to: FVQLKNGIVVDLWCGTEIGYLSF*TLTDQV
Trigger: AACTTGATCGGTCAGTGTTCAGAATGACAAGTAACC...GATTTCAGTTCCACACCACAAATCCACAACAATGCCATTTTTCAACTGTACAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp CATGACCTAACTATTCCTGCAGTAAATTTGCTACATTTGTTAGTCGTTTGTTTCGCCACACACAACACATaGAGGACATTCAATACACAG +
Preference number: 4 (lower is better)
Translates to: HDLTIPAVNLLHLLVVCFATHNT*RTFNTQ
Trigger: CTGTGTATTGAATGTCCTTCATGTGTTGTGTGTGGC...GAAACAAACGACTAACAAATGTAGCAAATTTACTGCAGGAATAGTTAGGTCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp CAGGGGATACAGGAAGTACCACAATCAAAAAGTCATGTTTCATTCATACCTGGAATACAGTTCATCAACTaGATTACTGGGCCTGTTTAT +
Preference number: 4 (lower is better)
Translates to: QGIQEVPQSKSHVSFIPGIQFIN*ITGPVY
Trigger: ATAAACAGGCCCAGTAATTCAGTTGATGAACTGTAT...TCCAGGTATGAATGAAACATGACTTTTTGATTGTGGTACTTCCTGTATCCCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp CATGACCTAACTATTCCTGCAGTAAATTTGCTACATTTGTTAGTCGTTTGTTTCCACAAGAAGCTGAGCTaGATATCACTGTCCTACACA +
Preference number: 4 (lower is better)
Translates to: HDLTIPAVNLLHLLVVCFHKKLS*ISLSYT
Trigger: TGTGTAGGACAGTGATATTCAGCTCAGCTTCTTGTG...GAAACAAACGACTAACAAATGTAGCAAATTTACTGCAGGAATAGTTAGGTCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp AAACTAATTTTTGACCTCAGAACCCTTTGTTCAACAGAAATCTCAGGAGGAAGCAAAATGGCATTGTTGTaGATTTGTGGTGTGGAACTG +
Preference number: 4 (lower is better)
Translates to: KLIFDLRTLCSTEISGGSKMALL*ICGVEL
Trigger: CAGTTCCACACCACAAATCCACAACAATGCCATTTT...GCTTCCTCCTGAGATTTCTGTTGAACAAAGGGTTCTGAGGTCAAAAATTAGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp TTTGTACAGTTGAAAAATGGCATTGTTGTGGATTTGTGGTGTGGAACTGAAATCTTGGTAAAATTTGGGTaGCTGCATTTTTCCCTTACG +
Preference number: 4 (lower is better)
Translates to: FVQLKNGIVVDLWCGTEILVKFG*LHFSLT
Trigger: CGTAAGGGAAAAATGCAGTCACCCAAATTTTACCAA...GATTTCAGTTCCACACCACAAATCCACAACAATGCCATTTTTCAACTGTACAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp CATGACCTAACTATTCCTGCAGTAAATTTGCTACATTTGTTAGTCGTTTGTTTCATCTCTCCAAAGGTGTaGCATCAAAAACTCAACAGG +
Preference number: 4 (lower is better)
Translates to: HDLTIPAVNLLHLLVVCFISPKV*HQKLNR
Trigger: CCTGTTGAGTTTTTGATGGCACACCTTTGGAGAGAT...GAAACAAACGACTAACAAATGTAGCAAATTTACTGCAGGAATAGTTAGGTCATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp CATGACCTAACTATTCCTGCAGTAAATTTGCTACATTTGTTAGTCGTTTGTTTCTGTACGTTAAAAGTCTaGAGTATCAAGAGGACCCAG +
Preference number: 4 (lower is better)
Translates to: HDLTIPAVNLLHLLVVCFCTLKV*SIKRTQ
Trigger: CTGGGTCCTCTTGATACTGCAGACTTTTAACGTACA...GAAACAAACGACTAACAAATGTAGCAAATTTACTGCAGGAATAGTTAGGTCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp TTTGTACAGTTGAAAAATGGCATTGTTGTGGATTTGTGGTGTGGAACTGAAATCATTCTGAGGTATTTCTaGTTTGAGGTGATCTGTGGT +
Preference number: 4 (lower is better)
Translates to: FVQLKNGIVVDLWCGTEIILRYF*FEVICG
Trigger: ACCACAGATCACCTCAAACCAGAAATACCTCAGAAT...GATTTCAGTTCCACACCACAAATCCACAACAATGCCATTTTTCAACTGTACAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
3UTR CAA 72 bp ATTAGCGACTGGAAATGTGTTACAAAGAGCTTATCTTaGGAACTAATTTGCGTGCAAGACCAGCCAATTAAA +
Preference number: 4 (lower is better)
Translates to: ISDWKCVTKSLS*ELICVQDQPIK
Trigger: TTTAATTGGCTGGTCTTGCACGCAAATTAGTTCCAAAGATAAGCTCTTTGTAACACATTTCCAGTCGCTAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp CATGACCTAACTATTCCTGCAGTAAATTTGCTACATTTGTTAGTCGTTTGTTTCAGTGTACGTTTCTCTTaGAAGGTAAAGCTCATTAGC +
Preference number: 4 (lower is better)
Translates to: HDLTIPAVNLLHLLVVCFSVRFS*KVKLIS
Trigger: GCTAATGAGCTTTACCTTTCAAGAGAAACGTACACT...GAAACAAACGACTAACAAATGTAGCAAATTTACTGCAGGAATAGTTAGGTCATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp CATGACCTAACTATTCCTGCAGTAAATTTGCTACATTTGTTAGTCGTTTGTTTCGTTCAACATGAGGTCTaGGGTAACTGGTTCTTAAAA +
Preference number: 4 (lower is better)
Translates to: HDLTIPAVNLLHLLVVCFVQHEV*GNWFLK
Trigger: TTTTAAGAACCAGTTACCTCAGACCTCATGTTGAAC...GAAACAAACGACTAACAAATGTAGCAAATTTACTGCAGGAATAGTTAGGTCATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp CATGACCTAACTATTCCTGCAGTAAATTTGCTACATTTGTTAGTCGTTTGTTTCCCATGCTCGTATAGCTaGGTTACCACTTTTAATCTT +
Preference number: 4 (lower is better)
Translates to: HDLTIPAVNLLHLLVVCFPCSYS*VTTFNL
Trigger: AAGATTAAAAGTGGTAACTCAGCTATACGAGCATGG...GAAACAAACGACTAACAAATGTAGCAAATTTACTGCAGGAATAGTTAGGTCATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR GCA 90 bp TTTGTACAGTTGAAAAATGGCATTGTTGTGGATTTGTGGTGTGGAACTGAAATCTTTCACAGCAACATATaGTACAGACATCTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: FVQLKNGIVVDLWCGTEIFHSNI*YRHLPK
Trigger: TTTGGGAAGATGTCTGTAGCATATGTTGCTGTGAAA...GATTTCAGTTCCACACCACAAATCCACAACAATGCCATTTTTCAACTGTACAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp CATGACCTAACTATTCCTGCAGTAAATTTGCTACATTTGTTAGTCGTTTGTTTCTTGAGCATTAGCGACTaGAAATGTGTTACAAAGAGC +
Preference number: 4 (lower is better)
Translates to: HDLTIPAVNLLHLLVVCFLSISD*KCVTKS
Trigger: GCTCTTTGTAACACATTTCCAGTCGCTAATGCTCAA...GAAACAAACGACTAACAAATGTAGCAAATTTACTGCAGGAATAGTTAGGTCATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR TCA 90 bp CATGACCTAACTATTCCTGCAGTAAATTTGCTACATTTGTTAGTCGTTTGTTTCCAAAGTTTTTGTACCTaGATCTTATTCGAGTCCCAT +
Preference number: 4 (lower is better)
Translates to: HDLTIPAVNLLHLLVVCFQSFCT*ILFESH
Trigger: ATGGGACTCGAATAAGATTCAGGTACAAAAACTTTG...GAAACAAACGACTAACAAATGTAGCAAATTTACTGCAGGAATAGTTAGGTCATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp CATGACCTAACTATTCCTGCAGTAAATTTGCTACATTTGTTAGTCGTTTGTTTCTCAAAATTTAAACCTTaGAAGCCACATAGCGAAGCA +
Preference number: 4 (lower is better)
Translates to: HDLTIPAVNLLHLLVVCFSKFKP*KPHSEA
Trigger: TGCTTCGCTATGTGGCTTCCAAGGTTTAAATTTTGA...GAAACAAACGACTAACAAATGTAGCAAATTTACTGCAGGAATAGTTAGGTCATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CCA 90 bp CATGACCTAACTATTCCTGCAGTAAATTTGCTACATTTGTTAGTCGTTTGTTTCAGATGCGGTGACTGCTaGTTAATTAAACTTTTTGAA +
Preference number: 4 (lower is better)
Translates to: HDLTIPAVNLLHLLVVCFRCGDC*LIKLFE
Trigger: TTCAAAAAGTTTAATTAACCAGCAGTCACCGCATCT...GAAACAAACGACTAACAAATGTAGCAAATTTACTGCAGGAATAGTTAGGTCATG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS GCA 90 bp GGCGGCTGCGCTCTCCTTCCCGCTCCTTCCTTCGGTCTCGTTCCCTaGGCGCTTCCTGCGCCTTCGTCCCCGAGCAGCGTTCGGGCTCCA +
Preference number: 5 (lower is better)
Translates to: GGCALLPAPSFGLVP*ALPAPSSPSSVRAP
Trigger: TGGAGCCCGAACGCTGCTCGGGGACGAAGGCGCAGGAAGCGCGCAGGGAACGAGACCGAAGGAAGGAGCGGGAAGGAGAGCGCAGCCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS GCA 90 bp TCTCCTTCCCGCTCCTTCCTTCGGTCTCGTTCCCTGCGCGCTTCCTaGGCCTTCGTCCCCGAGCAGCGTTCGGGCTCCAAGGGCCGGTCG +
Preference number: 5 (lower is better)
Translates to: SPSRSFLRSRSLRAS*AFVPEQRSGSKGRS
Trigger: CGACCGGCCCTTGGAGCCCGAACGCTGCTCGGGGACGAAGGCGCAGGAAGCGCGCAGGGAACGAGACCGAAGGAAGGAGCGGGAAGGAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS CCA 90 bp CGCAGCGCTCCAGGCCGCTCTGGTTGGTGCGCTCCAGCTCCCAGTTaGCGTTGTAGTAGATGCACTCCCGTGTCTCAGCCTCCCCACGCC +
Preference number: 5 (lower is better)
Translates to: RSAPGRSGWCAPAPS*RCSRCTPVSQPPHA
Trigger: GGCGTGGGGAGGCTGAGACACGGGAGTGCATCTACTACAACGCCAACTGGGAGCTGGAGCGCACCAACCAGAGCGGCCTGGAGCGCTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352511.5
ENST00000461232.1
ENST00000465020.5
CDS GCA 90 bp CGCTCTGGTTGGTGCGCTCCAGCTCCCAGTTGGCGTTGTAGTAGATaGACTCCCGTGTCTCAGCCTCCCCACGCCCAGAGCCGGCGCACA +
Preference number: 5 (lower is better)
Translates to: RSGWCAPAPSWRCSR*TPVSQPPHAQSRRT
Trigger: TGTGCGCCGGCTCTGGGCGTGGGGAGGCTGAGACACGGGAGTGCATCTACTACAACGCCAACTGGGAGCTGGAGCGCACCAACCAGAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352511.5
ENST00000465020.5
CDS GCA 90 bp CGCTCTGGTTGGTGCGCTCCAGCTCCCAGTTGGCGTTGTAGTAGATaGACTCCCGTGTCTCAGCCTCCCCACGCCCAGAGCCTGTGCCCC +
Preference number: 5 (lower is better)
Translates to: RSGWCAPAPSWRCSR*TPVSQPPHAQSLCP
Trigger: GGGGCACAGGCTCTGGGCGTGGGGAGGCTGAGACACGGGAGTGCATCTACTACAACGCCAACTGGGAGCTGGAGCGCACCAACCAGAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461232.1
CDS CCA 90 bp GCCGCTTGTCCTGCTCGCCTTCGCAGCGCTCCAGGCCGCTCTGGTTaGTGCGCTCCAGCTCCCAGTTGGCGTTGTAGTAGATGCACTCCC +
Preference number: 5 (lower is better)
Translates to: AACPARLRSAPGRSG*CAPAPSWRCSRCTP
Trigger: GGGAGTGCATCTACTACAACGCCAACTGGGAGCTGGAGCGCACCAACCAGAGCGGCCTGGAGCGCTGCGAAGGCGAGCAGGACAAGCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352511.5
ENST00000461232.1
ENST00000465020.5
CDS GCA 90 bp GCTTGTCCTGCTCGCCTTCGCAGCGCTCCAGGCCGCTCTGGTTGGTaGGCTCCAGCTCCCAGTTGGCGTTGTAGTAGATGCACTCCCGTG +
Preference number: 5 (lower is better)
Translates to: ACPARLRSAPGRSGW*APAPSWRCSRCTPV
Trigger: CACGGGAGTGCATCTACTACAACGCCAACTGGGAGCTGGAGCGCACCAACCAGAGCGGCCTGGAGCGCTGCGAAGGCGAGCAGGACAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352511.5
ENST00000461232.1
ENST00000465020.5
CDS GCA 90 bp TTCCAGACACAGCCAAAGCGCCCCCGAGCCTTGATCTCCAGCAGCTaGAGTGGCTTCAGGCCCACCAGAGGGGATGGTGGTGGAGGCCCA +
Preference number: 5 (lower is better)
Translates to: FQTQPKRPRALISSS*SGFRPTRGDGGGGP
Trigger: TGGGCCTCCACCACCATCCCCTCTGGTGGGCCTGAAGCCACTGCAGCTGCTGGAGATCAAGGCTCGGGGGCGCTTTGGCTGTGTCTGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352511.5
ENST00000461232.1
ENST00000465020.5
CDS GCA 90 bp CAGGGACACCCGCTCCTCCACACAGCCCGCGGACAAGCGAGCCTCTaGATCATGGTCCCAGCACTCCTCGATGGTCACACAAAGCTGGGC +
Preference number: 5 (lower is better)
Translates to: QGHPLLHTARGQASL*IMVPALLDGHTKLG
Trigger: GCCCAGCTTTGTGTGACCATCGAGGAGTGCTGGGACCATGATGCAGAGGCTCGCTTGTCCGCGGGCTGTGTGGAGGAGCGGGTGTCCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352511.5
ENST00000461232.1
ENST00000465020.5
CDS GCA 90 bp CTAGCCAGCAGCCCTTCTTCACGAGCTCGATGGTGCCAGAGCTGTTaGGCCAGGAGGCGTAGCAGTGCAGCCGCTTGTCCTGCTCGCCTT +
Preference number: 5 (lower is better)
Translates to: LASSPSSRARWCQSC*ARRRSSAAACPARL
Trigger: AAGGCGAGCAGGACAAGCGGCTGCACTGCTACGCCTCCTGGCGCAACAGCTCTGGCACCATCGAGCTCGTGAAGAAGGGCTGCTGGCTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352511.5
ENST00000461232.1
ENST00000465020.5
CDS TCA 90 bp GGGGGTAGTAGACCAAAGGCTGAACAAGCACACCGGGGCCAGGACTaGGGCTTGCACCTACATTGTCCCTGTCTGCCTGCAGCAGCACCC +
Preference number: 5 (lower is better)
Translates to: GGSRPKAEQAHRGQD*GLHLHCPCLPAAAP
Trigger: GGGTGCTGCTGCAGGCAGACAGGGACAATGTAGGTGCAAGCCTCAGTCCTGGCCCCGGTGTGCTTGTTCAGCCTTTGGTCTACTACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461232.1
CDS-3UTR CAA 90 bp CTGGGGGACAGGTCTTCAGCTGGGCCTCAGGACTGGCCATTATGCATACCAGAACCAGCGAGGCAGGCCTaGGCAGACTCCACCCAGGAA +
Preference number: 5 (lower is better)
Translates to: LGDRSSAGPQDWPLCIPEPARQA*ADSTQE
Trigger: TTCCTGGGTGGAGTCTGCCAAGGCCTGCCTCGCTGG...TTCTGGTATGCATAATGGCCAGTCCTGAGGCCCAGCTGAAGACCTGTCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CAA 90 bp TGGGAACACACTGACCTTGTGTCCCATGGTCTGCGGAACAGCAGGTCTACAGGACCCACGGCCCCCGCCTaGCCTACCCTCACGATGAAG +
Preference number: 5 (lower is better)
Translates to: WEHTDLVSHGLRNSRSTGPTAPA*PTLTMK
Trigger: CTTCATCGTGAGGGTAGGCAAGGCGGGGGCCGTGGG...TCCTGTAGACCTGCTGTTCCGCAGACCATGGGACACAAGGTCAGTGTGTTCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS TCA 90 bp GGGGGTGGCTCGTACGTGACTTCCGGGCCCCCAGCCTCTGGCAAATaGGTGAAGCGTTCGTTGCAGAAGTTGCCTTCACAGCAGCAGAAG +
Preference number: 5 (lower is better)
Translates to: GGGSYVTSGPPASGK*VKRSLQKLPSQQQK
Trigger: CTTCTGCTGCTGTGAAGGCAACTTCTGCAACGAACGCTTCACTCATTTGCCAGAGGCTGGGGGCCCGGAAGTCACGTACGAGCCACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000352511.5
ENST00000461232.1
ENST00000465020.5
CDS TCA 90 bp CAGCAACCACACCTGGTGCTCGGCAGGGCTGGAGAACTTAAGGAATaGGGCCTGCGTGTACAGGGTAAGCCTCCCAGAGTCACCAAGGGG +
Preference number: 5 (lower is better)
Translates to: QQPHLVLGRAGELKE*GLRVQGKPPRVTKG
Trigger: CCCCTTGGTGACTCTGGGAGGCTTACCCTGTACACGCAGGCCTCATTCCTTAAGTTCTCCAGCCCTGCCGAGCACCAGGTGTGGTTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461232.1
CDS-3UTR CAA 90 bp CTGGGGGACAGGTCTTCAGCTGGGCCTCAGGACTGGCCATTATGCATACCAGAAAAGCGCCCCCGAGCCTaGATCTCCAGCAGCTGCAGT +
Preference number: 5 (lower is better)
Translates to: LGDRSSAGPQDWPLCIPEKRPRA*ISSSCS
Trigger: ACTGCAGCTGCTGGAGATCAAGGCTCGGGGGCGCTT...TTCTGGTATGCATAATGGCCAGTCCTGAGGCCCAGCTGAAGACCTGTCCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CAA 90 bp GAAAAGGCACGCAGGCCTGACCTGTCTGTACTGTGTCTTGACCGCAAAGTCCCATGGGCAATAGACGGCTaGTGGCCCTCGCCACGGCAC +
Preference number: 5 (lower is better)
Translates to: EKARRPDLSVLCLDRKVPWAIDG*WPSPRH
Trigger: GTGCCGTGGCGAGGGCCACAAGCCGTCTATTGCCCA...TGGGACTTTGCGGTCAAGACACAGTACAGACAGGTCAGGCCTGCGTGCCTTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS TCA 90 bp ACAGCCAGCCCACCAGCAGCCAAGAGCCCTACTTCGCCATCAGCCTaGAAGGCTGACTGGAGTAGGAAAGAACACGAACCCTGCCCTGAC +
Preference number: 5 (lower is better)
Translates to: TASPPAAKSPTSPSA*KADWSRKEHEPCPD
Trigger: GTCAGGGCAGGGTTCGTGTTCTTTCCTACTCCAGTCAGCCTTTCAGGCTGATGGCGAAGTAGGGCTCTTGGCTGCTGGTGGGCTGGCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461232.1
CDS GCA 90 bp CACACCGGGGCCAGGACTGAGGCTTGCACCTACATTGTCCCTGTCTaGCTGCAGCAGCACCCAATTACTGGGTTATTCGAAGCACCCTGC +
Preference number: 5 (lower is better)
Translates to: HTGARTEACTYIVPV*LQQHPITGLFEAPC
Trigger: GCAGGGTGCTTCGAATAACCCAGTAATTGGGTGCTGCTGCAGGCAGACAGGGACAATGTAGGTGCAAGCCTCAGTCCTGGCCCCGGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461232.1
CDS CCA 90 bp TTGCACCTACATTGTCCCTGTCTGCCTGCAGCAGCACCCAATTACTaGGTTATTCGAAGCACCCTGCCCAGAGGCCACAGGGCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: LHLHCPCLPAAAPNY*VIRSTLPRGHRASS
Trigger: AGAGGAGGCCCTGTGGCCTCTGGGCAGGGTGCTTCGAATAACCCAGTAATTGGGTGCTGCTGCAGGCAGACAGGGACAATGTAGGTGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461232.1
CDS CCA 90 bp CCACACTTTTTGGGCCCACATAGGCCAGTGACCTGGCACCACTCCTaGCTGGTCTTCTCCTACCACTATTCCCATCCCAGGAAGGAGGGA +
Preference number: 5 (lower is better)
Translates to: PHFLGPHRPVTWHHS*LVFSYHYSHPRKEG
Trigger: TCCCTCCTTCCTGGGATGGGAATAGTGGTAGGAGAAGACCAGCCAGGAGTGGTGCCAGGTCACTGGCCTATGTGGGCCCAAAAAGTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461232.1
CDS-3UTR CAA 90 bp CTGGGGGACAGGTCTTCAGCTGGGCCTCAGGACTGGCCATTATGCATACCAGAACTCCAAACCCCGCTCTaGCTGTTAATGCTCGGCCTC +
Preference number: 5 (lower is better)
Translates to: LGDRSSAGPQDWPLCIPELQTPL*LLMLGL
Trigger: GAGGCCGAGCATTAACAGCAAGAGCGGGGTTTGGAG...TTCTGGTATGCATAATGGCCAGTCCTGAGGCCCAGCTGAAGACCTGTCCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CAA 90 bp TGGGAACACACTGACCTTGTGTCCCATGGTCTGCGGAACAGCAGGTCTACAGGACCCAATGCCCCATCATaGAGGGCCCTCTGCGTGACA +
Preference number: 5 (lower is better)
Translates to: WEHTDLVSHGLRNSRSTGPNAPS*RALCVT
Trigger: TGTCACGCAGAGGGCCCTCAATGATGGGGCATTGGG...TCCTGTAGACCTGCTGTTCCGCAGACCATGGGACACAAGGTCAGTGTGTTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS GCA 90 bp GTAGACCAAAGGCTGAACAAGCACACCGGGGCCAGGACTGAGGCTTaGACCTACATTGTCCCTGTCTGCCTGCAGCAGCACCCAATTACT +
Preference number: 5 (lower is better)
Translates to: VDQRLNKHTGARTEA*TYIVPVCLQQHPIT
Trigger: AGTAATTGGGTGCTGCTGCAGGCAGACAGGGACAATGTAGGTGCAAGCCTCAGTCCTGGCCCCGGTGTGCTTGTTCAGCCTTTGGTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461232.1
CDS CCA 90 bp TTCTTGTGCACCACCACCTCCTGCAGCTCCTCCAACGAAGGGTGCTaGCCAATCTCTTCCTCAAAGGGCAGCATGTACTCATCCACGGGT +
Preference number: 5 (lower is better)
Translates to: FLCTTTSCSSSNEGC*PISSSKGSMYSSTG
Trigger: ACCCGTGGATGAGTACATGCTGCCCTTTGAGGAAGAGATTGGCCAGCACCCTTCGTTGGAGGAGCTGCAGGAGGTGGTGGTGCACAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352511.5
ENST00000461232.1
ENST00000465020.5
CDS GCA 90 bp ATCTTCTTGTGCACCACCACCTCCTGCAGCTCCTCCAACGAAGGGTaGTGGCCAATCTCTTCCTCAAAGGGCAGCATGTACTCATCCACG +
Preference number: 5 (lower is better)
Translates to: IFLCTTTSCSSSNEG*WPISSSKGSMYSST
Trigger: CGTGGATGAGTACATGCTGCCCTTTGAGGAAGAGATTGGCCAGCACCCTTCGTTGGAGGAGCTGCAGGAGGTGGTGGTGCACAAGAAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352511.5
ENST00000461232.1
ENST00000465020.5
CDS CCA 90 bp GAGACCATGCCAGTGGGTCCTCCACAACTCCCTGCCCATACGGAATaGAAAGGACCCTGTAAGTGTCCTTTCTACACCCAGCAACCACAC +
Preference number: 5 (lower is better)
Translates to: ETMPVGPPQLPAHTE*KGPCKCPFYTQQPH
Trigger: GTGTGGTTGCTGGGTGTAGAAAGGACACTTACAGGGTCCTTTCCATTCCGTATGGGCAGGGAGTTGTGGAGGACCCACTGGCATGGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461232.1
CDS-3UTR CAA 90 bp CTCCTAGACCCATGCCCTATAAGGAGATCCCCCACCTTCTTCTTGCCATCAGAATCCGTGAGGGAGCCCTaGTCATGGAAGGCCGTGATG +
Preference number: 5 (lower is better)
Translates to: LLDPCPIRRSPTFFLPSESVREP*SWKAVM
Trigger: CATCACGGCCTTCCATGACAAGGGCTCCCTCACGGA...TTCTGATGGCAAGAAGAAGGTGGGGGATCTCCTTATAGGGCATGGGTCTAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS TCA 90 bp AAGTCAGGGACCACCCACTTGCCACTACCATGGGCAGTACCCAAGTaGAGAGGCTGGGAGTTCCAAATCTCAGAGGACCCAAGGGTTCAA +
Preference number: 5 (lower is better)
Translates to: KSGTTHLPLPWAVPK*RGWEFQISEDPRVQ
Trigger: TTGAACCCTTGGGTCCTCTGAGATTTGGAACTCCCAGCCTCTTCACTTGGGTACTGCCCATGGTAGTGGCAAGTGGGTGGTCCCTGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461232.1
CDS GCA 90 bp ACAACCTCACTGCCAGAACCCCACACAGACACCCGAGAGGATAGTTaGACCAAGCATCCAGCCATCCTATCCACACTTTTTGGGCCCACA +
Preference number: 5 (lower is better)
Translates to: TTSLPEPHTDTREDS*TKHPAILSTLFGPT
Trigger: TGTGGGCCCAAAAAGTGTGGATAGGATGGCTGGATGCTTGGTGCAACTATCCTCTCGGGTGTCTGTGTGGGGTTCTGGCAGTGAGGTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461232.1
CDS CCA 90 bp GTATCATGGCTAGAGCAACATGTCGAAAGGAGGGGACAACAAGGATaGCCTCAGCCTGCAGCCCAAGCCCTAGGTCCTCAAAGAGTTTCC +
Preference number: 5 (lower is better)
Translates to: VSWLEQHVERRGQQG*PQPAAQALGPQRVS
Trigger: GGAAACTCTTTGAGGACCTAGGGCTTGGGCTGCAGGCTGAGGCCATCCTTGTTGTCCCCTCCTTTCGACATGTTGCTCTAGCCATGATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461232.1
CDS-3UTR CAA 90 bp GGCCTGACCTGTCTGTACTGTGTCTTGACCGCAAAGTCCCACACCAGAACCATGTGTCTGTACTGTGTCTaGACCGCAAAGTCCCACACC +
Preference number: 5 (lower is better)
Translates to: GLTCLYCVLTAKSHTRTMCLYCV*TAKSHT
Trigger: GGTGTGGGACTTTGCGGTCAAGACACAGTACAGACA...CATGGTTCTGGTGTGGGACTTTGCGGTCAAGACACAGTACAGACAGGTCAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CAA 90 bp GGGATTCTCTTGATAAAACTATCCCGTCCAGTGCACCTCTGTCTAGAAGCAGCAGCCCACTTGCAGCCCTaGCCCCTGAGCAACTCATGC +
Preference number: 5 (lower is better)
Translates to: GILLIKLSRPVHLCLEAAAHLQP*PLSNSC
Trigger: GCATGAGTTGCTCAGGGGCAAGGGCTGCAAGTGGGC...TGCTGCTTCTAGACAGAGGTGCACTGGACGGGATAGTTTTATCAAGAGAATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CAA 90 bp GGCCTGACCTGTCTGTACTGTGTCTTGACCGCAAAGTCCCACACCAGAACCATGCTCGGGCTAAAGCACTaGCAGGGACTGAAGTCAACA +
Preference number: 5 (lower is better)
Translates to: GLTCLYCVLTAKSHTRTMLGLKH*QGLKST
Trigger: TGTTGACTTCAGTCCCTGCAAGTGCTTTAGCCCGAG...CATGGTTCTGGTGTGGGACTTTGCGGTCAAGACACAGTACAGACAGGTCAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS TCA 90 bp GCCATTCTCCTGTCAAACCCAACCCCTTTCTGCAACTCCCTGAAGTaGCAGGATGCTTCTTCCAGGGGCAGGAGCAAGCAACGAATCTCA +
Preference number: 5 (lower is better)
Translates to: AILLSNPTPFCNSLK*QDASSRGRSKQRIS
Trigger: TGAGATTCGTTGCTTGCTCCTGCCCCTGGAAGAAGCATCCTGTCACTTCAGGGAGTTGCAGAAAGGGGTTGGGTTTGACAGGAGAATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461232.1
CDS GCA 90 bp AGAGCAACATGTCGAAAGGAGGGGACAACAAGGATGGCCTCAGCCTaGAGCCCAAGCCCTAGGTCCTCAAAGAGTTTCCATCTCCATTCA +
Preference number: 5 (lower is better)
Translates to: RATCRKEGTTRMASA*SPSPRSSKSFHLHS
Trigger: TGAATGGAGATGGAAACTCTTTGAGGACCTAGGGCTTGGGCTGCAGGCTGAGGCCATCCTTGTTGTCCCCTCCTTTCGACATGTTGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461232.1
CDS-3UTR CAA 90 bp AGGGCTGCACCCAATCTCAGACTTTCTCCAAACCCCGCTCTTGCTGTTAATGCTCAGCCAGGAGCCTGCTaGGATGACAGCACACTAGAA +
Preference number: 5 (lower is better)
Translates to: RAAPNLRLSPNPALAVNAQPGAC*DDSTLE
Trigger: TTCTAGTGTGCTGTCATCCAAGCAGGCTCCTGGCTG...AGCATTAACAGCAAGAGCGGGGTTTGGAGAAAGTCTGAGATTGGGTGCAGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CAA 90 bp GGCCTGACCTGTCTGTACTGTGTCTTGACCGCAAAGTCCCACACCAGAACCATGAATGCCATGACGAGCTaGCCAGAAGCCCTTTCTTCA +
Preference number: 5 (lower is better)
Translates to: GLTCLYCVLTAKSHTRTMNAMTS*PEALSS
Trigger: TGAAGAAAGGGCTTCTGGCAAGCTCGTCATGGCATT...CATGGTTCTGGTGTGGGACTTTGCGGTCAAGACACAGTACAGACAGGTCAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CAA 90 bp GAAAAGGCACGCAGGCCTGACCTGTCTGTACTGTGTCTTGACCGCAAAGTCCCACTTAAGATGACTGACTaGGGACCCTCACTGGGAACA +
Preference number: 5 (lower is better)
Translates to: EKARRPDLSVLCLDRKVPLKMTD*GPSLGT
Trigger: TGTTCCCAGTGAGGGTCCCAAGTCAGTCATCTTAAG...TGGGACTTTGCGGTCAAGACACAGTACAGACAGGTCAGGCCTGCGTGCCTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS TCA 90 bp ACGCTCATCTCCACCCCTACTGTTGGCCTTCATGAGGAAAGAGCTTaGTTTCCCAGGGTATACCCCAGAGAGAAGGATACTGACTGGCTG +
Preference number: 5 (lower is better)
Translates to: TLISTPTVGLHEERA*FPRVYPREKDTDWL
Trigger: CAGCCAGTCAGTATCCTTCTCTCTGGGGTATACCCTGGGAAATCAAGCTCTTTCCTCATGAAGGCCAACAGTAGGGGTGGAGATGAGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461232.1
CDS-3UTR CAA 90 bp GGGATTCTCTTGATAAAACTATCCCGTCCAGTGCACCTCTGTCTAGAAGCAGCACTCTGCCACGACTGCTaGTCCTGGAGTGGGAAGATC +
Preference number: 5 (lower is better)
Translates to: GILLIKLSRPVHLCLEAALCHDC*SWSGKI
Trigger: GATCTTCCCACTCCAGGACAAGCAGTCGTGGCAGAG...TGCTGCTTCTAGACAGAGGTGCACTGGACGGGATAGTTTTATCAAGAGAATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CAA 90 bp TGGGAACACACTGACCTTGTGTCCCATGGTCTGCGGAACAGCAGGTCTACAGGATTGGACTTTTCTTTGTaGGCAGGCCTTTTGGAGCCA +
Preference number: 5 (lower is better)
Translates to: WEHTDLVSHGLRNSRSTGLDFSL*AGLLEP
Trigger: TGGCTCCAAAAGGCCTGCCAACAAAGAAAAGTCCAA...TCCTGTAGACCTGCTGTTCCGCAGACCATGGGACACAAGGTCAGTGTGTTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS GCA 90 bp CAGGCTTTCCCCACAAGACTGGAAAGCCGACAAAGGCAGGACCCTTaGCGTCCTAAGTGGCAGAATCATTCCAAACACATCATAGATGGA +
Preference number: 5 (lower is better)
Translates to: QAFPTRLESRQRQDP*RPKWQNHSKHIIDG
Trigger: TCCATCTATGATGTGTTTGGAATGATTCTGCCACTTAGGACGGCAAGGGTCCTGCCTTTGTCGGCTTTCCAGTCTTGTGGGGAAAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461232.1
CDS CCA 90 bp CCCTGTCTGTCTCAGGTGATTGTGATAAAGATCTCAAGGACCACCTaGGAAAACTACAAAGGGGAGTGGCTTCCTGCTGCTCCTGTCTCT +
Preference number: 5 (lower is better)
Translates to: PCLSQVIVIKISRTT*ENYKGEWLPAAPVS
Trigger: AGAGACAGGAGCAGCAGGAAGCCACTCCCCTTTGTAGTTTTCCCAGGTGGTCCTTGAGATCTTTATCACAATCACCTGAGACAGACAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461232.1
CDS CCA 90 bp CCTAAGCAAAAGGGAGGAGGCAGGAAACCTAATGCCACAGAAGGATaGATAAACAGCCAGACAGACAGAGTCCAGATGCACAGAAAGGGC +
Preference number: 5 (lower is better)
Translates to: PKQKGGGRKPNATEG*INSQTDRVQMHRKG
Trigger: GCCCTTTCTGTGCATCTGGACTCTGTCTGTCTGGCTGTTTATCCATCCTTCTGTGGCATTAGGTTTCCTGCCTCCTCCCTTTTGCTTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461232.1
CDS-3UTR CAA 90 bp AAACTAATTTTTGACCTCAGAACCCTTTGTTCAACAGAAATCTCAGGAGGAAGCTCCAGGCCGCTCTGGTaGGTGCGCTCCAGCTCCCAG +
Preference number: 5 (lower is better)
Translates to: KLIFDLRTLCSTEISGGSSRPLW*VRSSSQ
Trigger: CTGGGAGCTGGAGCGCACCAACCAGAGCGGCCTGGA...GCTTCCTCCTGAGATTTCTGTTGAACAAAGGGTTCTGAGGTCAAAAATTAGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CAA 90 bp GAAAAGGCACGCAGGCCTGACCTGTCTGTACTGTGTCTTGACCGCAAAGTCCCATTGTTGGCAGGCCTTTaGGAGCCACCAATTGTTTTA +
Preference number: 5 (lower is better)
Translates to: EKARRPDLSVLCLDRKVPLLAGL*EPPIVL
Trigger: TAAAACAATTGGTGGCTCCAAAAGGCCTGCCAACAA...TGGGACTTTGCGGTCAAGACACAGTACAGACAGGTCAGGCCTGCGTGCCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CAA 90 bp GGCCTGACCTGTCTGTACTGTGTCTTGACCGCAAAGTCCCACACCAGAACCATGGGCATTGTTGTGGATTaGTGGTGTGGAACTGAAATC +
Preference number: 5 (lower is better)
Translates to: GLTCLYCVLTAKSHTRTMGIVVD*WCGTEI
Trigger: GATTTCAGTTCCACACCACAAATCCACAACAATGCC...CATGGTTCTGGTGTGGGACTTTGCGGTCAAGACACAGTACAGACAGGTCAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS TCA 90 bp TGGCACATTGGCTATATTACAGCCACAACCATCCCCTACTGCCTATaGCAATCCCTCATAACACAAGTCCCCTGTATGACTCCCAGCCCA +
Preference number: 5 (lower is better)
Translates to: WHIGYITATTIPYCL*QSLITQVPCMTPSP
Trigger: TGGGCTGGGAGTCATACAGGGGACTTGTGTTATGAGGGATTGTCATAGGCAGTAGGGGATGGTTGTGGCTGTAATATAGCCAATGTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461232.1
CDS TCA 90 bp CTACCTTCCTCCCCTCACTGCAGCCACACCATAATGTCACACCCTTaGATGTGTTTGGCTTCTAGGCTTAGCGTAAGTCGGAAGTTACCA +
Preference number: 5 (lower is better)
Translates to: LPSSPHCSHTIMSHP*MCLASRLSVSRKLP
Trigger: TGGTAACTTCCGACTTACGCTAAGCCTAGAAGCCAAACACATTCAAGGGTGTGACATTATGGTGTGGCTGCAGTGAGGGGAGGAAGGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461232.1
CDS-3UTR CAA 90 bp CTGGGGGACAGGTCTTCAGCTGGGCCTCAGGACTGGCCATTATGCATACCAGAAAGGAATGTTCTACATTaGAGCATTAGCGACTGGAAA +
Preference number: 5 (lower is better)
Translates to: LGDRSSAGPQDWPLCIPERNVLH*SISDWK
Trigger: TTTCCAGTCGCTAATGCTCAAATGTAGAACATTCCT...TTCTGGTATGCATAATGGCCAGTCCTGAGGCCCAGCTGAAGACCTGTCCCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CAA 90 bp TGGGAACACACTGACCTTGTGTCCCATGGTCTGCGGAACAGCAGGTCTACAGGATTTTTCCTCCTATTGTaGGGGTGTAACTGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: WEHTDLVSHGLRNSRSTGFFLLL*GCNCFF
Trigger: GAAGAAGCAGTTACACCCCAACAATAGGAGGAAAAA...TCCTGTAGACCTGCTGTTCCGCAGACCATGGGACACAAGGTCAGTGTGTTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CAA 90 bp CTCCTAGACCCATGCCCTATAAGGAGATCCCCCACCTTCTTCTTGCCATCAGAATGGAGTGGGAAGATCTaGACAGCTACAAAGTCATTC +
Preference number: 5 (lower is better)
Translates to: LLDPCPIRRSPTFFLPSEWSGKI*TATKSF
Trigger: GAATGACTTTGTAGCTGTCAAGATCTTCCCACTCCA...TTCTGATGGCAAGAAGAAGGTGGGGGATCTCCTTATAGGGCATGGGTCTAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CAA 90 bp CTCCTAGACCCATGCCCTATAAGGAGATCCCCCACCTTCTTCTTGCCATCAGAAACAGAACTCATGCATTaGCAAGAAGACCCATCCTCA +
Preference number: 5 (lower is better)
Translates to: LLDPCPIRRSPTFFLPSETELMH*QEDPSS
Trigger: TGAGGATGGGTCTTCTTGCAAATGCATGAGTTCTGT...TTCTGATGGCAAGAAGAAGGTGGGGGATCTCCTTATAGGGCATGGGTCTAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CAA 90 bp GGGATTCTCTTGATAAAACTATCCCGTCCAGTGCACCTCTGTCTAGAAGCAGCATGGCCAGCCCACATTTaGACCCATGAAGCAAAAACT +
Preference number: 5 (lower is better)
Translates to: GILLIKLSRPVHLCLEAAWPAHI*THEAKT
Trigger: AGTTTTTGCTTCATGGGTCAAAATGTGGGCTGGCCA...TGCTGCTTCTAGACAGAGGTGCACTGGACGGGATAGTTTTATCAAGAGAATCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CAA 90 bp AGGGCTGCACCCAATCTCAGACTTTCTCCAAACCCCGCTCTTGCTGTTAATGCTATCTTTGGAACTAATTaGCGTGCAAGACCAGCCAAT +
Preference number: 5 (lower is better)
Translates to: RAAPNLRLSPNPALAVNAIFGTN*RARPAN
Trigger: ATTGGCTGGTCTTGCACGCAAATTAGTTCCAAAGAT...AGCATTAACAGCAAGAGCGGGGTTTGGAGAAAGTCTGAGATTGGGTGCAGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CAA 90 bp GAAAAGGCACGCAGGCCTGACCTGTCTGTACTGTGTCTTGACCGCAAAGTCCCAACAAAGAGCTTATCTTaGGAACTAATTTGCGTGCAA +
Preference number: 5 (lower is better)
Translates to: EKARRPDLSVLCLDRKVPTKSLS*ELICVQ
Trigger: TTGCACGCAAATTAGTTCCAAAGATAAGCTCTTTGT...TGGGACTTTGCGGTCAAGACACAGTACAGACAGGTCAGGCCTGCGTGCCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CAA 90 bp GGGATTCTCTTGATAAAACTATCCCGTCCAGTGCACCTCTGTCTAGAAGCAGCAGCCCATCACCACACATaGGCATTTAGAGAATATGTG +
Preference number: 5 (lower is better)
Translates to: GILLIKLSRPVHLCLEAAAHHHT*AFREYV
Trigger: CACATATTCTCTAAATGCCAATGTGTGGTGATGGGC...TGCTGCTTCTAGACAGAGGTGCACTGGACGGGATAGTTTTATCAAGAGAATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CAA 90 bp CAGGGGATACAGGAAGTACCACAATCAAAAAGTCATGTTTCATTCATACCTGGACGTTCGTTGCAGAAGTaGCCTTCACAGCAGCAGAAG +
Preference number: 5 (lower is better)
Translates to: QGIQEVPQSKSHVSFIPGRSLQK*PSQQQK
Trigger: CTTCTGCTGCTGTGAAGGCAACTTCTGCAACGAACG...TCCAGGTATGAATGAAACATGACTTTTTGATTGTGGTACTTCCTGTATCCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CAA 90 bp CATGACCTAACTATTCCTGCAGTAAATTTGCTACATTTGTTAGTCGTTTGTTTCTCCGAGGTAGTGCCGTaGACCGACCTCCGAATCAGG +
Preference number: 5 (lower is better)
Translates to: HDLTIPAVNLLHLLVVCFSEVVP*TDLRIR
Trigger: CCTGATTCGGAGGTCGGTCAACGGCACTACCTCGGA...GAAACAAACGACTAACAAATGTAGCAAATTTACTGCAGGAATAGTTAGGTCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CAA 90 bp AAACTAATTTTTGACCTCAGAACCCTTTGTTCAACAGAAATCTCAGGAGGAAGCTGGCTCAACCCTCCCTaGGCCAGGTCAAAACTTCTC +
Preference number: 5 (lower is better)
Translates to: KLIFDLRTLCSTEISGGSWLNPP*ARSKLL
Trigger: GAGAAGTTTTGACCTGGCCAAGGGAGGGTTGAGCCA...GCTTCCTCCTGAGATTTCTGTTGAACAAAGGGTTCTGAGGTCAAAAATTAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CAA 90 bp CAGGGGATACAGGAAGTACCACAATCAAAAAGTCATGTTTCATTCATACCTGGAGGGGAACAGATGGGGTaGGTTTCTGGAGTGCTACTA +
Preference number: 5 (lower is better)
Translates to: QGIQEVPQSKSHVSFIPGGEQMG*VSGVLL
Trigger: TAGTAGCACTCCAGAAACCAACCCCATCTGTTCCCC...TCCAGGTATGAATGAAACATGACTTTTTGATTGTGGTACTTCCTGTATCCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CAA 90 bp CATGACCTAACTATTCCTGCAGTAAATTTGCTACATTTGTTAGTCGTTTGTTTCAGCTCTACTTCGAGGTaGGAGCCTCGCTTCTCGGCA +
Preference number: 5 (lower is better)
Translates to: HDLTIPAVNLLHLLVVCFSSTSR*EPRFSA
Trigger: TGCCGAGAAGCGAGGCTCCAACCTCGAAGTAGAGCT...GAAACAAACGACTAACAAATGTAGCAAATTTACTGCAGGAATAGTTAGGTCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CAA 90 bp TTTGTACAGTTGAAAAATGGCATTGTTGTGGATTTGTGGTGTGGAACTGAAATCTGTTCCTGTAACCACTaGGCCAGCCCACATTTTGAC +
Preference number: 5 (lower is better)
Translates to: FVQLKNGIVVDLWCGTEICSCNH*ASPHFD
Trigger: GTCAAAATGTGGGCTGGCCAAGTGGTTACAGGAACA...GATTTCAGTTCCACACCACAAATCCACAACAATGCCATTTTTCAACTGTACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CAA 90 bp CAGGGGATACAGGAAGTACCACAATCAAAAAGTCATGTTTCATTCATACCTGGATTCACATCGGTTTATTaGAGGACCCAGTGCAGAGTT +
Preference number: 5 (lower is better)
Translates to: QGIQEVPQSKSHVSFIPGFTSVY*RTQCRV
Trigger: AACTCTGCACTGGGTCCTCAAATAAACCGATGTGAA...TCCAGGTATGAATGAAACATGACTTTTTGATTGTGGTACTTCCTGTATCCCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CAA 90 bp GGCAAAATTCTAGTTTCAAGAGGGCCATCCAATACTCCCACTTTAATGGAACAGACAGCCAACCTACAGTaGATGACAATTATTTACAAG +
Preference number: 5 (lower is better)
Translates to: GKILVSRGPSNTPTLMEQTANLQ*MTIIYK
Trigger: CTTGTAAATAATTGTCATCAACTGTAGGTTGGCTGT...CTGTTCCATTAAAGTGGGAGTATTGGATGGCCCTCTTGAAACTAGAATTTTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CAA 90 bp CAGGGGATACAGGAAGTACCACAATCAAAAAGTCATGTTTCATTCATACCTGGAGTCCCACTAGATAATTaGGACTTTTCTTTGTTGGCA +
Preference number: 5 (lower is better)
Translates to: QGIQEVPQSKSHVSFIPGVPLDN*DFSLLA
Trigger: TGCCAACAAAGAAAAGTCCAAATTATCTAGTGGGAC...TCCAGGTATGAATGAAACATGACTTTTTGATTGTGGTACTTCCTGTATCCCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CAA 90 bp CATGACCTAACTATTCCTGCAGTAAATTTGCTACATTTGTTAGTCGTTTGTTTCAAAAAGACCCGCAAATaGACTCCAGTCTGCCAGTGT +
Preference number: 5 (lower is better)
Translates to: HDLTIPAVNLLHLLVVCFKKTRK*TPVCQC
Trigger: ACACTGGCAGACTGGAGTCAATTTGCGGGTCTTTTT...GAAACAAACGACTAACAAATGTAGCAAATTTACTGCAGGAATAGTTAGGTCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CAA 90 bp CATGACCTAACTATTCCTGCAGTAAATTTGCTACATTTGTTAGTCGTTTGTTTCTTTAGTGCCCTGTGGTaGGTTTACAGTAGTTCTCAG +
Preference number: 5 (lower is better)
Translates to: HDLTIPAVNLLHLLVVCFFSALW*VYSSSQ
Trigger: CTGAGAACTACTGTAAACCAACCACAGGGCACTAAA...GAAACAAACGACTAACAAATGTAGCAAATTTACTGCAGGAATAGTTAGGTCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CAA 90 bp CATGACCTAACTATTCCTGCAGTAAATTTGCTACATTTGTTAGTCGTTTGTTTCTTACCACTTTTAATCTaGGTCTGCCATCTATGCCCC +
Preference number: 5 (lower is better)
Translates to: HDLTIPAVNLLHLLVVCFLPLLI*VCHLCP
Trigger: GGGGCATAGATGGCAGACCAAGATTAAAAGTGGTAA...GAAACAAACGACTAACAAATGTAGCAAATTTACTGCAGGAATAGTTAGGTCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CAA 90 bp CATGACCTAACTATTCCTGCAGTAAATTTGCTACATTTGTTAGTCGTTTGTTTCATCTCTAATAATCACTaGCTCCCAGTCGGCCTTTCA +
Preference number: 5 (lower is better)
Translates to: HDLTIPAVNLLHLLVVCFISNNH*LPVGLS
Trigger: TGAAAGGCCGACTGGGAGCAAGTGATTATTAGAGAT...GAAACAAACGACTAACAAATGTAGCAAATTTACTGCAGGAATAGTTAGGTCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CAA 90 bp AAACTAATTTTTGACCTCAGAACCCTTTGTTCAACAGAAATCTCAGGAGGAAGCACCTGCCTGAAAAACTaGTGGGTCATATTTTTCATA +
Preference number: 5 (lower is better)
Translates to: KLIFDLRTLCSTEISGGSTCLKN*WVIFFI
Trigger: TATGAAAAATATGACCCACAAGTTTTTCAGGCAGGT...GCTTCCTCCTGAGATTTCTGTTGAACAAAGGGTTCTGAGGTCAAAAATTAGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS-3UTR CAA 90 bp TTTGTACAGTTGAAAAATGGCATTGTTGTGGATTTGTGGTGTGGAACTGAAATCCTCATCATTACTAGATaGAACATGTTAGCTGCTAAG +
Preference number: 5 (lower is better)
Translates to: FVQLKNGIVVDLWCGTEILIITR*NMLAAK
Trigger: CTTAGCAGCTAACATGTTCAATCTAGTAATGATGAG...GATTTCAGTTCCACACCACAAATCCACAACAATGCCATTTTTCAACTGTACAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS GCA 72 bp CGCTCCTTCCTTCGGTCTCGTTCCCTGCGCGCTTCCTaGGCCTTCGTCCCCGAGCAGCGTTCGGGCTCCAAG +
Preference number: 6 (lower is better)
Translates to: RSFLRSRSLRAS*AFVPEQRSGSK
Trigger: CTTGGAGCCCGAACGCTGCTCGGGGACGAAGGCGCAGGAAGCGCGCAGGGAACGAGACCGAAGGAAGGAGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS GCA 72 bp GCTCTCCTTCCCGCTCCTTCCTTCGGTCTCGTTCCCTaGGCGCTTCCTGCGCCTTCGTCCCCGAGCAGCGTT +
Preference number: 6 (lower is better)
Translates to: ALLPAPSFGLVP*ALPAPSSPSSV
Trigger: AACGCTGCTCGGGGACGAAGGCGCAGGAAGCGCGCAGGGAACGAGACCGAAGGAAGGAGCGGGAAGGAGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352511.5
CDS GCA 72 bp GCTCGCCTTCGCAGCGCTCCAGGCCGCTCTGGTTGGTaGGCTCCAGCTCCCAGTTGGCGTTGTAGTAGATGC +
Preference number: 6 (lower is better)
Translates to: ARLRSAPGRSGW*APAPSWRCSRC
Trigger: GCATCTACTACAACGCCAACTGGGAGCTGGAGCGCACCAACCAGAGCGGCCTGGAGCGCTGCGAAGGCGAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352511.5
ENST00000461232.1
ENST00000465020.5
CDS GCA 72 bp CAGCCAAAGCGCCCCCGAGCCTTGATCTCCAGCAGCTaGAGTGGCTTCAGGCCCACCAGAGGGGATGGTGGT +
Preference number: 6 (lower is better)
Translates to: QPKRPRALISSS*SGFRPTRGDGG
Trigger: ACCACCATCCCCTCTGGTGGGCCTGAAGCCACTGCAGCTGCTGGAGATCAAGGCTCGGGGGCGCTTTGGCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352511.5
ENST00000461232.1
ENST00000465020.5
CDS CCA 72 bp CCTGCTCGCCTTCGCAGCGCTCCAGGCCGCTCTGGTTaGTGCGCTCCAGCTCCCAGTTGGCGTTGTAGTAGA +
Preference number: 6 (lower is better)
Translates to: PARLRSAPGRSG*CAPAPSWRCSR
Trigger: TCTACTACAACGCCAACTGGGAGCTGGAGCGCACCAACCAGAGCGGCCTGGAGCGCTGCGAAGGCGAGCAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352511.5
ENST00000461232.1
ENST00000465020.5
CDS CCA 72 bp CAGCAGCTGCAGTGGCTTCAGGCCCACCAGAGGGGATaGTGGTGGAGGCCCAGGGTCCTCATGGATGTCCAC +
Preference number: 6 (lower is better)
Translates to: QQLQWLQAHQRG*WWRPRVLMDVH
Trigger: GTGGACATCCATGAGGACCCTGGGCCTCCACCACCATCCCCTCTGGTGGGCCTGAAGCCACTGCAGCTGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352511.5
ENST00000461232.1
CDS GCA 72 bp TGGTGCGCTCCAGCTCCCAGTTGGCGTTGTAGTAGATaGACTCCCGTGTCTCAGCCTCCCCACGCCCAGAGC +
Preference number: 6 (lower is better)
Translates to: WCAPAPSWRCSR*TPVSQPPHAQS
Trigger: GCTCTGGGCGTGGGGAGGCTGAGACACGGGAGTGCATCTACTACAACGCCAACTGGGAGCTGGAGCGCACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352511.5
ENST00000461232.1
ENST00000465020.5
CDS GCA 72 bp CCGCTCCTCCACACAGCCCGCGGACAAGCGAGCCTCTaGATCATGGTCCCAGCACTCCTCGATGGTCACACA +
Preference number: 6 (lower is better)
Translates to: PLLHTARGQASL*IMVPALLDGHT
Trigger: TGTGTGACCATCGAGGAGTGCTGGGACCATGATGCAGAGGCTCGCTTGTCCGCGGGCTGTGTGGAGGAGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352511.5
ENST00000461232.1
ENST00000465020.5
CDS CAA 90 bp GTGACAGAGGTCACCAGGGAAACGAGACAGTCCGAGGTAGTGCCGTaGACCGACCTCCGAATCAGGGACACCCGCTCCTCCACACAGCCC +
Preference number: 6 (lower is better)
Translates to: VTEVTRETRQSEVVP*TDLRIRDTRSSTQP
Trigger: GGGCTGTGTGGAGGAGCGGGTGTCCCTGATTCGGAGGTCGGTCAACGGCACTACCTCGGACTGTCTCGTTTCCCTGGTGACCTCTGTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352511.5
ENST00000461232.1
ENST00000465020.5
CDS GCA 72 bp AGCCCTTCTTCACGAGCTCGATGGTGCCAGAGCTGTTaGGCCAGGAGGCGTAGCAGTGCAGCCGCTTGTCCT +
Preference number: 6 (lower is better)
Translates to: SPSSRARWCQSC*ARRRSSAAACP
Trigger: AGGACAAGCGGCTGCACTGCTACGCCTCCTGGCGCAACAGCTCTGGCACCATCGAGCTCGTGAAGAAGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352511.5
ENST00000461232.1
ENST00000465020.5
CDS CCA 72 bp CCAGGCCGCTCTGGTTGGTGCGCTCCAGCTCCCAGTTaGCGTTGTAGTAGATGCACTCCCGTGTCTCAGCCT +
Preference number: 6 (lower is better)
Translates to: PGRSGWCAPAPS*RCSRCTPVSQP
Trigger: AGGCTGAGACACGGGAGTGCATCTACTACAACGCCAACTGGGAGCTGGAGCGCACCAACCAGAGCGGCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352511.5
ENST00000461232.1
ENST00000465020.5
CDS CAA 72 bp GTCACCAGGGAAACGAGACAGTCCGAGGTAGTGCCGTaGACCGACCTCCGAATCAGGGACACCCGCTCCTCC +
Preference number: 6 (lower is better)
Translates to: VTRETRQSEVVP*TDLRIRDTRSS
Trigger: GGAGGAGCGGGTGTCCCTGATTCGGAGGTCGGTCAACGGCACTACCTCGGACTGTCTCGTTTCCCTGGTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352511.5
ENST00000461232.1
ENST00000465020.5
CDS GCA 72 bp CATCTAGCCAGCAGCCCTTCTTCACGAGCTCGATGGTaGCAGAGCTGTTGCGCCAGGAGGCGTAGCAGTGCA +
Preference number: 6 (lower is better)
Translates to: HLASSPSSRARW*QSCCARRRSSA
Trigger: TGCACTGCTACGCCTCCTGGCGCAACAGCTCTGGCACCATCGAGCTCGTGAAGAAGGGCTGCTGGCTAGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352511.5
ENST00000461232.1
ENST00000465020.5
CDS GCA 72 bp AGGCTGAACAAGCACACCGGGGCCAGGACTGAGGCTTaGACCTACATTGTCCCTGTCTGCCTGCAGCAGCAC +
Preference number: 6 (lower is better)
Translates to: RLNKHTGARTEA*TYIVPVCLQQH
Trigger: GTGCTGCTGCAGGCAGACAGGGACAATGTAGGTGCAAGCCTCAGTCCTGGCCCCGGTGTGCTTGTTCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461232.1
CDS GCA 72 bp TACGTGTGCCAGCTGGCACCAGCCCCCACCTCATTCTaGAGCCCATCACAGCTGCCCCTAGGCCTAAGCAAA +
Preference number: 6 (lower is better)
Translates to: YVCQLAPAPTSF*SPSQLPLGLSK
Trigger: TTTGCTTAGGCCTAGGGGCAGCTGTGATGGGCTGCAGAATGAGGTGGGGGCTGGTGCCAGCTGGCACACGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461232.1
CDS CCA 72 bp GGGTGGCTCGTACGTGACTTCCGGGCCCCCAGCCTCTaGCAAATGAGTGAAGCGTTCGTTGCAGAAGTTGCC +
Preference number: 6 (lower is better)
Translates to: GWLVRDFRAPSL*QMSEAFVAEVA
Trigger: GGCAACTTCTGCAACGAACGCTTCACTCATTTGCCAGAGGCTGGGGGCCCGGAAGTCACGTACGAGCCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352511.5
ENST00000461232.1
ENST00000465020.5
CDS CCA 72 bp GTACCGTCTCGTGCCTACCTGTCCGTGGGTGTCCCCTaGAGGTTTCCCTGGCTCAAATCGAACAGCCAAGCC +
Preference number: 6 (lower is better)
Translates to: VPSRAYLSVGVP*RFPWLKSNSQA
Trigger: GGCTTGGCTGTTCGATTTGAGCCAGGGAAACCTCCAGGGGACACCCACGGACAGGTAGGCACGAGACGGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352511.5
ENST00000461232.1
ENST00000465020.5
CDS CCA 72 bp CACTGCATCCACGGCAGCAGTTCTAGTGGGGGTCCGTaGAGACCTGAGACTTGTGGGGCCAGCCATGAAGCT +
Preference number: 6 (lower is better)
Translates to: HCIHGSSSSGGP*RPETCGASHEA
Trigger: AGCTTCATGGCTGGCCCCACAAGTCTCAGGTCTCCACGGACCCCCACTAGAACTGCTGCCGTGGATGCAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461232.1
CDS TCA 72 bp CACCTGGTGCTCGGCAGGGCTGGAGAACTTAAGGAATaGGGCCTGCGTGTACAGGGTAAGCCTCCCAGAGTC +
Preference number: 6 (lower is better)
Translates to: HLVLGRAGELKE*GLRVQGKPPRV
Trigger: GACTCTGGGAGGCTTACCCTGTACACGCAGGCCTCATTCCTTAAGTTCTCCAGCCCTGCCGAGCACCAGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461232.1
CDS CCA 72 bp AGTCATCTAGCCAGCAGCCCTTCTTCACGAGCTCGATaGTGCCAGAGCTGTTGCGCCAGGAGGCGTAGCAGT +
Preference number: 6 (lower is better)
Translates to: SHLASSPSSRAR*CQSCCARRRSS
Trigger: ACTGCTACGCCTCCTGGCGCAACAGCTCTGGCACCATCGAGCTCGTGAAGAAGGGCTGCTGGCTAGATGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352511.5
ENST00000461232.1
ENST00000465020.5
CDS CCA 72 bp TTGGGCCCACATAGGCCAGTGACCTGGCACCACTCCTaGCTGGTCTTCTCCTACCACTATTCCCATCCCAGG +
Preference number: 6 (lower is better)
Translates to: LGPHRPVTWHHS*LVFSYHYSHPR
Trigger: CCTGGGATGGGAATAGTGGTAGGAGAAGACCAGCCAGGAGTGGTGCCAGGTCACTGGCCTATGTGGGCCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461232.1
CDS CAA 72 bp AGCACACCGGGGCCAGGACTGAGGCTTGCACCTACATaGTCCCTGTCTGCCTGCAGCAGCACCCAATTACTG +
Preference number: 6 (lower is better)
Translates to: STPGPGLRLAPT*SLSACSSTQLL
Trigger: CAGTAATTGGGTGCTGCTGCAGGCAGACAGGGACAATGTAGGTGCAAGCCTCAGTCCTGGCCCCGGTGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461232.1
CDS TCA 72 bp AGACCAAAGGCTGAACAAGCACACCGGGGCCAGGACTaGGGCTTGCACCTACATTGTCCCTGTCTGCCTGCA +
Preference number: 6 (lower is better)
Translates to: RPKAEQAHRGQD*GLHLHCPCLPA
Trigger: TGCAGGCAGACAGGGACAATGTAGGTGCAAGCCTCAGTCCTGGCCCCGGTGTGCTTGTTCAGCCTTTGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461232.1
CDS GCA 72 bp AGGGCACTCCCCATCACTTCTGAACCCCCTTCCACCTaGTGCAGGAAGTGCCATCCAGGTGGACAACGACTT +
Preference number: 6 (lower is better)
Translates to: RALPITSEPPST*CRKCHPGGQRL
Trigger: AAGTCGTTGTCCACCTGGATGGCACTTCCTGCAGCAGGTGGAAGGGGGTTCAGAAGTGATGGGGAGTGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461232.1
CDS CCA 72 bp CATTGTCCCTGTCTGCCTGCAGCAGCACCCAATTACTaGGTTATTCGAAGCACCCTGCCCAGAGGCCACAGG +
Preference number: 6 (lower is better)
Translates to: HCPCLPAAAPNY*VIRSTLPRGHR
Trigger: CCTGTGGCCTCTGGGCAGGGTGCTTCGAATAACCCAGTAATTGGGTGCTGCTGCAGGCAGACAGGGACAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461232.1
CDS CCA 72 bp GAGCTCTGCCAGCACCCCATTATAGGCCGCCCACAATaGAGGCAGGTGGTGGCATTTACAACCTCACTGCCA +
Preference number: 6 (lower is better)
Translates to: ELCQHPIIGRPQ*RQVVAFTTSLP
Trigger: TGGCAGTGAGGTTGTAAATGCCACCACCTGCCTCCATTGTGGGCGGCCTATAATGGGGTGCTGGCAGAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461232.1
CDS TCA 72 bp TCGTACGTGACTTCCGGGCCCCCAGCCTCTGGCAAATaGGTGAAGCGTTCGTTGCAGAAGTTGCCTTCACAG +
Preference number: 6 (lower is better)
Translates to: SYVTSGPPASGK*VKRSLQKLPSQ
Trigger: CTGTGAAGGCAACTTCTGCAACGAACGCTTCACTCATTTGCCAGAGGCTGGGGGCCCGGAAGTCACGTACGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352511.5
ENST00000461232.1
ENST00000465020.5
CDS GCA 72 bp CTAAGGGTCCGAAATGTCACCCAATCAGAATGGCAGTaGCCAGCCACAGCTCTGGTCATCCTGCACCAGGTG +
Preference number: 6 (lower is better)
Translates to: LRVRNVTQSEWQ*PATALVILHQV
Trigger: CACCTGGTGCAGGATGACCAGAGCTGTGGCTGGGCACTGCCATTCTGATTGGGTGACATTTCGGACCCTTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461232.1
CDS GCA 72 bp ATCACTTCTGAACCCCCTTCCACCTGCTGCAGGAAGTaGCATCCAGGTGGACAACGACTTCAACCCCCACCT +
Preference number: 6 (lower is better)
Translates to: ITSEPPSTCCRK*HPGGQRLQPPP
Trigger: AGGTGGGGGTTGAAGTCGTTGTCCACCTGGATGGCACTTCCTGCAGCAGGTGGAAGGGGGTTCAGAAGTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000461232.1
CDS CCA 72 bp TTACTTTTAAAGTCCCTGTGGGCAATAGACGGCTTGTaGCCCTCGCCACGGCACCAGGGCACATCCTCATGC +
Preference number: 6 (lower is better)
Translates to: LLLKSLWAIDGL*PSPRHQGTSSC
Trigger: GCATGAGGATGTGCCCTGGTGCCGTGGCGAGGGCCACAAGCCGTCTATTGCCCACAGGGACTTTAAAAGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352511.5
ENST00000461232.1
ENST00000465020.5
CDS CCA 72 bp ACCACCACCTCCTGCAGCTCCTCCAACGAAGGGTGCTaGCCAATCTCTTCCTCAAAGGGCAGCATGTACTCA +
Preference number: 6 (lower is better)
Translates to: TTTSCSSSNEGC*PISSSKGSMYS
Trigger: TGAGTACATGCTGCCCTTTGAGGAAGAGATTGGCCAGCACCCTTCGTTGGAGGAGCTGCAGGAGGTGGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352511.5
ENST00000461232.1
ENST00000465020.5
CDS CAA 72 bp GTTGCACCAAGCATCCAGCCATCCTATCCACACTTTTaGGGCCCACATAGGCCAGTGACCTGGCACCACTCC +
Preference number: 6 (lower is better)
Translates to: VAPSIQPSYPHF*GPHRPVTWHHS
Trigger: GGAGTGGTGCCAGGTCACTGGCCTATGTGGGCCCAAAAAGTGTGGATAGGATGGCTGGATGCTTGGTGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461232.1
CDS TCA 72 bp CTACTTCGAGGTTGGAGCCTCGCTTCTCGGCAGCAATaGACTGTAGCAGGTTCTCGTGCTTCATGCCAGGTG +
Preference number: 6 (lower is better)
Translates to: LLRGWSLASRQQ*TVAGSRASCQV
Trigger: CACCTGGCATGAAGCACGAGAACCTGCTACAGTTCATTGCTGCCGAGAAGCGAGGCTCCAACCTCGAAGTAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352511.5
ENST00000461232.1
ENST00000465020.5
CDS TCA 72 bp AGAGTATGGAGATGCCAAAGGAGGTTCGGTTCTGTCTaGGAGCTCTGCCAGCACCCCATTATAGGCCGCCCA +
Preference number: 6 (lower is better)
Translates to: RVWRCQRRFGSV*ELCQHPIIGRP
Trigger: TGGGCGGCCTATAATGGGGTGCTGGCAGAGCTCTCAGACAGAACCGAACCTCCTTTGGCATCTCCATACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461232.1
CDS CCA 72 bp CCAGTGGGTCCTCCACAACTCCCTGCCCATACGGAATaGAAAGGACCCTGTAAGTGTCCTTTCTACACCCAG +
Preference number: 6 (lower is better)
Translates to: PVGPPQLPAHTE*KGPCKCPFYTQ
Trigger: CTGGGTGTAGAAAGGACACTTACAGGGTCCTTTCCATTCCGTATGGGCAGGGAGTTGTGGAGGACCCACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461232.1
CDS CAA 72 bp TTCTTACTTTTAAAGTCCCTGTGGGCAATAGACGGCTaGTGGCCCTCGCCACGGCACCAGGGCACATCCTCA +
Preference number: 6 (lower is better)
Translates to: FLLLKSLWAIDG*WPSPRHQGTSS
Trigger: TGAGGATGTGCCCTGGTGCCGTGGCGAGGGCCACAAGCCGTCTATTGCCCACAGGGACTTTAAAAGTAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352511.5
ENST00000461232.1
ENST00000465020.5
CDS TCA 72 bp ACTGTAGCAGGTTCTCGTGCTTCATGCCAGGTGTGCTaGAGATCTCCCGTTCACTCTGCCACGACTGCTTGT +
Preference number: 6 (lower is better)
Translates to: TVAGSRASCQVC*RSPVHSATTAC
Trigger: ACAAGCAGTCGTGGCAGAGTGAACGGGAGATCTTCAGCACACCTGGCATGAAGCACGAGAACCTGCTACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352511.5
ENST00000461232.1
ENST00000465020.5
CDS TCA 72 bp ACACAAAGCTGGGCCAGGCCCGGGTGTTTCAACCAGTaGTCTTTAATGGTGGGCCTCATCTTCTTGTGCACC +
Preference number: 6 (lower is better)
Translates to: TQSWARPGCFNQ*SLMVGLIFLCT
Trigger: GGTGCACAAGAAGATGAGGCCCACCATTAAAGATCACTGGTTGAAACACCCGGGCCTGGCCCAGCTTTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352511.5
ENST00000461232.1
ENST00000465020.5
CDS TCA 72 bp TCCTCCTACAGGCAACCCAGCGAAAAATGGCAGCCGTaGGCGGGCCAGACTTCAAGTCCTACTCCAATACTT +
Preference number: 6 (lower is better)
Translates to: SSYRQPSEKWQP*AGQTSSPTPIL
Trigger: AAGTATTGGAGTAGGACTTGAAGTCTGGCCCGCTCACGGCTGCCATTTTTCGCTGGGTTGCCTGTAGGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461232.1
CDS TCA 72 bp CTGTCAAACCCAACCCCTTTCTGCAACTCCCTGAAGTaGCAGGATGCTTCTTCCAGGGGCAGGAGCAAGCAA +
Preference number: 6 (lower is better)
Translates to: LSNPTPFCNSLK*QDASSRGRSKQ
Trigger: TTGCTTGCTCCTGCCCCTGGAAGAAGCATCCTGTCACTTCAGGGAGTTGCAGAAAGGGGTTGGGTTTGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461232.1
CDS TCA 72 bp CCTCACGCTCATCTCCACCCCTACTGTTGGCCTTCATaGGGAAAGAGCTTGATTTCCCAGGGTATACCCCAG +
Preference number: 6 (lower is better)
Translates to: PHAHLHPYCWPS*GKSLISQGIPQ
Trigger: CTGGGGTATACCCTGGGAAATCAAGCTCTTTCCTCATGAAGGCCAACAGTAGGGGTGGAGATGAGCGTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461232.1
CDS GCA 72 bp TTCATGCCAGGTGTGCTGAAGATCTCCCGTTCACTCTaGCACGACTGCTTGTCCTGGAGTGGGAAGATCTTG +
Preference number: 6 (lower is better)
Translates to: FMPGVLKISRSL*HDCLSWSGKIL
Trigger: CAAGATCTTCCCACTCCAGGACAAGCAGTCGTGGCAGAGTGAACGGGAGATCTTCAGCACACCTGGCATGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352511.5
ENST00000461232.1
ENST00000465020.5
CDS GCA 72 bp GCCAGGACTGAGGCTTGCACCTACATTGTCCCTGTCTaGCTGCAGCAGCACCCAATTACTGGGTTATTCGAA +
Preference number: 6 (lower is better)
Translates to: ARTEACTYIVPV*LQQHPITGLFE
Trigger: TTCGAATAACCCAGTAATTGGGTGCTGCTGCAGGCAGACAGGGACAATGTAGGTGCAAGCCTCAGTCCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461232.1
CDS TCA 72 bp GTCTGGACAGACACTCATGTCCTGGGCTTAGATGCTTaGCTCTTTAGGGGGCAGGTCCACATTGGTGACAGA +
Preference number: 6 (lower is better)
Translates to: VWTDTHVLGLDA*LFRGQVHIGDR
Trigger: TCTGTCACCAATGTGGACCTGCCCCCTAAAGAGTCAAGCATCTAAGCCCAGGACATGAGTGTCTGTCCAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352511.5
ENST00000461232.1
ENST00000465020.5
CDS GCA 72 bp CTGCCAGAACCCCACACAGACACCCGAGAGGATAGTTaGACCAAGCATCCAGCCATCCTATCCACACTTTTT +
Preference number: 6 (lower is better)
Translates to: LPEPHTDTREDS*TKHPAILSTLF
Trigger: AAAAAGTGTGGATAGGATGGCTGGATGCTTGGTGCAACTATCCTCTCGGGTGTCTGTGTGGGGTTCTGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461232.1
CDS CAA 72 bp CTAAGGACATCCTCACGCTCATCTCCACCCCTACTGTaGGCCTTCATGAGGAAAGAGCTTGATTTCCCAGGG +
Preference number: 6 (lower is better)
Translates to: LRTSSRSSPPLL*AFMRKELDFPG
Trigger: CCCTGGGAAATCAAGCTCTTTCCTCATGAAGGCCAACAGTAGGGGTGGAGATGAGCGTGAGGATGTCCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461232.1
CDS TCA 72 bp TCCCCTCACTGCAGCCACACCATAATGTCACACCCTTaGATGTGTTTGGCTTCTAGGCTTAGCGTAAGTCGG +
Preference number: 6 (lower is better)
Translates to: SPHCSHTIMSHP*MCLASRLSVSR
Trigger: CCGACTTACGCTAAGCCTAGAAGCCAAACACATTCAAGGGTGTGACATTATGGTGTGGCTGCAGTGAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461232.1
CDS TCA 72 bp TCCACCCCTACTGTTGGCCTTCATGAGGAAAGAGCTTaGTTTCCCAGGGTATACCCCAGAGAGAAGGATACT +
Preference number: 6 (lower is better)
Translates to: STPTVGLHEERA*FPRVYPREKDT
Trigger: AGTATCCTTCTCTCTGGGGTATACCCTGGGAAATCAAGCTCTTTCCTCATGAAGGCCAACAGTAGGGGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461232.1
CDS CCA 72 bp TCTCAGGTGATTGTGATAAAGATCTCAAGGACCACCTaGGAAAACTACAAAGGGGAGTGGCTTCCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: SQVIVIKISRTT*ENYKGEWLPAA
Trigger: AGCAGCAGGAAGCCACTCCCCTTTGTAGTTTTCCCAGGTGGTCCTTGAGATCTTTATCACAATCACCTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461232.1
CDS TCA 72 bp GGCTATATTACAGCCACAACCATCCCCTACTGCCTATaGCAATCCCTCATAACACAAGTCCCCTGTATGACT +
Preference number: 6 (lower is better)
Translates to: GYITATTIPYCL*QSLITQVPCMT
Trigger: AGTCATACAGGGGACTTGTGTTATGAGGGATTGTCATAGGCAGTAGGGGATGGTTGTGGCTGTAATATAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461232.1
CDS CCA 72 bp CCCAGTGCACATCGGAATCACTGTATGTTGCAGGTGTaGGAAAGGGGAGCAGTGTTCATTCAAATACGTATT +
Preference number: 6 (lower is better)
Translates to: PSAHRNHCMLQV*ERGAVFIQIRI
Trigger: AATACGTATTTGAATGAACACTGCTCCCCTTTCCCACACCTGCAACATACAGTGATTCCGATGTGCACTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461232.1