RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ACVR2A (Homo sapiens)

Ensembl gene IDs: ENSG00000121989

Ensembl transcript IDs: ENST00000241416.12, ENST00000404590.1, ENST00000462659.1, ENST00000465329.1, ENST00000487959.5, ENST00000495775.1, ENST00000535787.5

Found 290 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGTTTCTCTTAGTCTCATGTCCTTCACATCTGTGCTGTCGGCAATaGAGTAAGTCTCCCAGAGCAACATTTTTCAACAAAGGGTCTTCT +
Preference number: 1 (lower is better)
Translates to: RFLLVSCPSHLCCRQ*SKSPRATFFNKGSS
Trigger: AGAAGACCCTTTGTTGAAAAATGTTGCTCTGGGAGACTTACTGCATTGCCGACAGCACAGATGTGAAGGACATGAGACTAAGAGAAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
3UTR GCA 90 bp ATAGAGTTTGCAAGGTTTCTCTTAGTCTCATGTCCTTCACATCTGTaGTGTCGGCAATGCAGTAAGTCTCCCAGAGCAACATTTTTCAAC +
Preference number: 1 (lower is better)
Translates to: IEFARFLLVSCPSHL*CRQCSKSPRATFFN
Trigger: GTTGAAAAATGTTGCTCTGGGAGACTTACTGCATTGCCGACAGCACAGATGTGAAGGACATGAGACTAAGAGAAACCTTGCAAACTCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
3UTR TCA 90 bp ATGGAAGCAAAACCAGATCAAGAAATTGAGAGACCAAGTACTTTGTaGAATAAAGAGGTGAACTCAACATTGAAAAGGGAATTGCTAGGA +
Preference number: 1 (lower is better)
Translates to: MEAKPDQEIERPSTL*NKEVNSTLKRELLG
Trigger: TCCTAGCAATTCCCTTTTCAATGTTGAGTTCACCTCTTTATTTCACAAAGTACTTGGTCTCTCAATTTCTTGATCTGGTTTTGCTTCCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
3UTR-3UTR GCA 90 bp CAAGTTGATCATAAAGCATTCCTTACGCGGAGATCTGGGCAAGGTAAAGAGTATCTGTGCTGTCGGCAATaGAGTAAGTCTCCCAGAGCA +
Preference number: 2 (lower is better)
Translates to: QVDHKAFLTRRSGQGKEYLCCRQ*SKSPRA
Trigger: TGCTCTGGGAGACTTACTGCATTGCCGACAGCACAG...ATACTCTTTACCTTGCCCAGATCTCCGCGTAAGGAATGCTTTATGATCAACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
3UTR-3UTR GCA 90 bp ACTGTACCCCACTTTGATGACTTTATGTACACAGAACAGCAGCACACTAAACATCTGTGCTGTCGGCAATaGAGTAAGTCTCCCAGAGCA +
Preference number: 2 (lower is better)
Translates to: TVPHFDDFMYTEQQHTKHLCCRQ*SKSPRA
Trigger: TGCTCTGGGAGACTTACTGCATTGCCGACAGCACAG...ATGTTTAGTGTGCTGCTGTTCTGTGTACATAAAGTCATCAAAGTGGGGTACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
3UTR-3UTR GCA 90 bp ATGGTCTGCAGCACACAGACGCTATTACTCTTCTTTTCCTCCCTGCTTAAAGTCGAGGAGGCTAGGCTATaGTACCTATATCAACATTGG +
Preference number: 2 (lower is better)
Translates to: MVCSTQTLLLFFSSLLKVEEARL*YLYQHW
Trigger: CCAATGTTGATATAGGTAGCATAGCCTAGCCTCCTC...GACTTTAAGCAGGGAGGAAAAGAAGAGTAATAGCGTCTGTGTGCTGCAGACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
3UTR-3UTR TCA 90 bp CAAGTTGATCATAAAGCATTCCTTACGCGGAGATCTGGGCAAGGTAAAGAGTATGGTAACGACACTTCCTaGGGTGATCCTAAAACAGTG +
Preference number: 2 (lower is better)
Translates to: QVDHKAFLTRRSGQGKEYGNDTS*GDPKTV
Trigger: CACTGTTTTAGGATCACCTCAGGAAGTGTCGTTACC...ATACTCTTTACCTTGCCCAGATCTCCGCGTAAGGAATGCTTTATGATCAACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
3UTR-3UTR CCA 90 bp ATGGTCTGCAGCACACAGACGCTATTACTCTTCTTTTCCTCCCTGCTTAAAGTCACACTGCTTTACGAATaGCCACTTATTGTTGGCACT +
Preference number: 2 (lower is better)
Translates to: MVCSTQTLLLFFSSLLKVTLLYE*PLIVGT
Trigger: AGTGCCAACAATAAGTGGCCATTCGTAAAGCAGTGT...GACTTTAAGCAGGGAGGAAAAGAAGAGTAATAGCGTCTGTGTGCTGCAGACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
3UTR-3UTR CCA 90 bp CAAGTTGATCATAAAGCATTCCTTACGCGGAGATCTGGGCAAGGTAAAGAGTATTCTCATAGCAGACAGTaGGGAATTCTGGGTAACGAC +
Preference number: 2 (lower is better)
Translates to: QVDHKAFLTRRSGQGKEYSHSRQ*GILGND
Trigger: GTCGTTACCCAGAATTCCCCACTGTCTGCTATGAGA...ATACTCTTTACCTTGCCCAGATCTCCGCGTAAGGAATGCTTTATGATCAACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
3UTR CAA 90 bp TCAAATAAAGCCGAACACTGGTTAATCCATCAGTCCTATGGCAAGTaGATCATAAAGCATTCCTTACGCGGAGATCTGGGCAAGGTAAAG +
Preference number: 2 (lower is better)
Translates to: SNKAEHWLIHQSYGK*IIKHSLRGDLGKVK
Trigger: CTTTACCTTGCCCAGATCTCCGCGTAAGGAATGCTTTATGATCAACTTGCCATAGGACTGATGGATTAACCAGTGTTCGGCTTTATTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
3UTR-3UTR GCA 90 bp CCCACTTTGATGACTTTATGTACACAGAACAGCAGCACACTAAACATTCACAAGTGTCCTTCACATCTGTaGTGTCGGCAATGCAGTAAG +
Preference number: 2 (lower is better)
Translates to: PTLMTLCTQNSSTLNIHKCPSHL*CRQCSK
Trigger: CTTACTGCATTGCCGACAGCACAGATGTGAAGGACA...CTTGTGAATGTTTAGTGTGCTGCTGTTCTGTGTACATAAAGTCATCAAAGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
3UTR-3UTR TCA 90 bp ATGGTCTGCAGCACACAGACGCTATTACTCTTCTTTTCCTCCCTGCTTAAAGTCCCACACACTGTTTGGTaGAAAGAAATACACTACAAT +
Preference number: 2 (lower is better)
Translates to: MVCSTQTLLLFFSSLLKVPHTVW*KEIHYN
Trigger: ATTGTAGTGTATTTCTTTTCACCAAACAGTGTGTGG...GACTTTAAGCAGGGAGGAAAAGAAGAGTAATAGCGTCTGTGTGCTGCAGACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
3UTR-3UTR GCA 90 bp ACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATTGTCCTTCACATCTGTaGTGTCGGCAATGCAGTAAG +
Preference number: 2 (lower is better)
Translates to: TEQQHTKHSQAVSYWHYNCPSHL*CRQCSK
Trigger: CTTACTGCATTGCCGACAGCACAGATGTGAAGGACA...ATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
3UTR-3UTR GCA 90 bp ATGACTTTATGTACACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCATTGTCCTTCACATCTGTaGTGTCGGCAATGCAGTAAG +
Preference number: 2 (lower is better)
Translates to: MTLCTQNSSTLNIHKLCHCPSHL*CRQCSK
Trigger: CTTACTGCATTGCCGACAGCACAGATGTGAAGGACA...ATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGTGTACATAAAGTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
3UTR CAA 90 bp TTTCAATTTTATAATTTAGCAACCGTGGAACTGAGGTATACCTTGTaGAGGGAGGTTAAAGTAATGCTTGGAAGCCTCTTTACTGTACCC +
Preference number: 2 (lower is better)
Translates to: FQFYNLATVELRYTL*REVKVMLGSLFTVP
Trigger: GGGTACAGTAAAGAGGCTTCCAAGCATTACTTTAACCTCCCTCAACAAGGTATACCTCAGTTCCACGGTTGCTAAATTATAAAATTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
3UTR-3UTR TCA 90 bp GATGACTTTATGTACACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCAGGAATTAGTGTCTTCTaGCAGACATTAAGAAATCTG +
Preference number: 2 (lower is better)
Translates to: DDFMYTEQQHTKHSQAVSGISVF*QTLRNL
Trigger: CAGATTTCTTAATGTCTGTCAGAAGACACTAATTCC...TGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGTGTACATAAAGTCATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
3UTR-3UTR CCA 90 bp AAGTTGATCATAAAGCATTCCTTACGCGGAGATCTGGGCAAGGTAAAGAGTATAAAAAGATCCTTGATTTaGAGAGGGCTACATTCTTCA +
Preference number: 2 (lower is better)
Translates to: KLIIKHSLRGDLGKVKSIKRSLI*RGLHSS
Trigger: TGAAGAATGTAGCCCTCTCCAAATCAAGGATCTTTT...TATACTCTTTACCTTGCCCAGATCTCCGCGTAAGGAATGCTTTATGATCAACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
3UTR-3UTR TCA 90 bp ACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATGGAATTAGTGTCTTCTaGCAGACATTAAGAAATCTG +
Preference number: 2 (lower is better)
Translates to: TEQQHTKHSQAVSYWHYNGISVF*QTLRNL
Trigger: CAGATTTCTTAATGTCTGTCAGAAGACACTAATTCC...ATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
3UTR-3UTR CCA 90 bp ATGACTTTATGTACACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCATAAAAGATCCTTGATTTaGAGAGGGCTACATTCTTCA +
Preference number: 2 (lower is better)
Translates to: MTLCTQNSSTLNIHKLCHKRSLI*RGLHSS
Trigger: TGAAGAATGTAGCCCTCTCCAAATCAAGGATCTTTT...ATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGTGTACATAAAGTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
3UTR-3UTR CCA 90 bp GAACAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATAGTAAAAGATCCTTGATTTaGAGAGGGCTACATTCTTCA +
Preference number: 2 (lower is better)
Translates to: EQQHTKHSQAVSYWHYNSKRSLI*RGLHSS
Trigger: TGAAGAATGTAGCCCTCTCCAAATCAAGGATCTTTT...ACTATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
3UTR CAA 90 bp TGTTTTCAATTTTATAATTTAGCAACCGTGGAACTGAGGTATACCTaGTTGAGGGAGGTTAAAGTAATGCTTGGAAGCCTCTTTACTGTA +
Preference number: 2 (lower is better)
Translates to: CFQFYNLATVELRYT*LREVKVMLGSLFTV
Trigger: TACAGTAAAGAGGCTTCCAAGCATTACTTTAACCTCCCTCAACAAGGTATACCTCAGTTCCACGGTTGCTAAATTATAAAATTGAAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
3UTR CCA 72 bp AAAGTTACAAGTCTCATAGCAGACAGTGGGGAATTCTaGGTAACGACACTTCCTGAGGTGATCCTAAAACAG +
Preference number: 3 (lower is better)
Translates to: KVTSLIADSGEF*VTTLPEVILKQ
Trigger: CTGTTTTAGGATCACCTCAGGAAGTGTCGTTACCCAGAATTCCCCACTGTCTGCTATGAGACTTGTAACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
3UTR GCA 72 bp TTAGTCTCATGTCCTTCACATCTGTGCTGTCGGCAATaGAGTAAGTCTCCCAGAGCAACATTTTTCAACAAA +
Preference number: 3 (lower is better)
Translates to: LVSCPSHLCCRQ*SKSPRATFFNK
Trigger: TTTGTTGAAAAATGTTGCTCTGGGAGACTTACTGCATTGCCGACAGCACAGATGTGAAGGACATGAGACTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
3UTR CCA 72 bp GCCAGCACAAGAAATGCTAAAACACTGCTTTACGAATaGCCACTTATTGTTGGCACTAAGCATAGCTTACCT +
Preference number: 3 (lower is better)
Translates to: ASTRNAKTLLYE*PLIVGTKHSLP
Trigger: AGGTAAGCTATGCTTAGTGCCAACAATAAGTGGCCATTCGTAAAGCAGTGTTTTAGCATTTCTTGTGCTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
3UTR-3UTR CAA 90 bp CAAGTTGATCATAAAGCATTCCTTACGCGGAGATCTGGGCAAGGTAAAGAGTATGAACTGAGGTATACCTaGTTGAGGGAGGTTAAAGTA +
Preference number: 3 (lower is better)
Translates to: QVDHKAFLTRRSGQGKEYELRYT*LREVKV
Trigger: TACTTTAACCTCCCTCAACAAGGTATACCTCAGTTC...ATACTCTTTACCTTGCCCAGATCTCCGCGTAAGGAATGCTTTATGATCAACTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
3UTR GCA 72 bp CTACATTACAAGCCAGCACAAGAAATGCTAAAACACTaGTTTACGAATGGCCACTTATTGTTGGCACTAAGC +
Preference number: 3 (lower is better)
Translates to: LHYKPAQEMLKH*FTNGHLLLALS
Trigger: GCTTAGTGCCAACAATAAGTGGCCATTCGTAAAGCAGTGTTTTAGCATTTCTTGTGCTGGCTTGTAATGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
3UTR-3UTR CAA 90 bp AAGTTGATCATAAAGCATTCCTTACGCGGAGATCTGGGCAAGGTAAAGAGTATACAAAAGATCCTTGATTaGGAGAGGGCTACATTCTTC +
Preference number: 3 (lower is better)
Translates to: KLIIKHSLRGDLGKVKSIQKILD*ERATFF
Trigger: GAAGAATGTAGCCCTCTCCAAATCAAGGATCTTTTG...TATACTCTTTACCTTGCCCAGATCTCCGCGTAAGGAATGCTTTATGATCAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
3UTR-3UTR CAA 90 bp GAACAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATAGTCAAAAGATCCTTGATTaGGAGAGGGCTACATTCTTC +
Preference number: 3 (lower is better)
Translates to: EQQHTKHSQAVSYWHYNSQKILD*ERATFF
Trigger: GAAGAATGTAGCCCTCTCCAAATCAAGGATCTTTTG...ACTATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
3UTR-3UTR CAA 90 bp AAGTTGATCATAAAGCATTCCTTACGCGGAGATCTGGGCAAGGTAAAGAGTATATTACTGTACCCCACTTaGATGACTTTATGTACACAG +
Preference number: 3 (lower is better)
Translates to: KLIIKHSLRGDLGKVKSILLYPT*MTLCTQ
Trigger: CTGTGTACATAAAGTCATCAAAGTGGGGTACAGTAA...TATACTCTTTACCTTGCCCAGATCTCCGCGTAAGGAATGCTTTATGATCAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
3UTR CCA 72 bp AACACTCCATTAGCCAGGTCCAAAAGATCCTTGATTTaGAGAGGGCTACATTCTTCATGTACACTTTTTCAA +
Preference number: 3 (lower is better)
Translates to: NTPLARSKRSLI*RGLHSSCTLFQ
Trigger: TTGAAAAAGTGTACATGAAGAATGTAGCCCTCTCCAAATCAAGGATCTTTTGGACCTGGCTAATGGAGTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
3UTR TCA 72 bp AAACCAGATCAAGAAATTGAGAGACCAAGTACTTTGTaGAATAAAGAGGTGAACTCAACATTGAAAAGGGAA +
Preference number: 3 (lower is better)
Translates to: KPDQEIERPSTL*NKEVNSTLKRE
Trigger: TTCCCTTTTCAATGTTGAGTTCACCTCTTTATTTCACAAAGTACTTGGTCTCTCAATTTCTTGATCTGGTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR CCA 90 bp CCTTCACATCTGTGCTGTCGGCAATGCAGTAAGTCTCCCAGAGCAACATTTTTCTGGAGAAGGTGGGGGTaGTCCTGGGTCTTGAGTTGG +
Preference number: 4 (lower is better)
Translates to: PSHLCCRQCSKSPRATFFWRRWG*SWVLSW
Trigger: CCAACTCAAGACCCAGGACCACCCCCACCTTCTCCA...GAAAAATGTTGCTCTGGGAGACTTACTGCATTGCCGACAGCACAGATGTGAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CCA 90 bp CTTAGCAGCTCCAGTTCAGAGTCCCATTTCTTAGTGTGCACAGATGGCGCAACCATCCAGCTGATAACCTaGCTTCTGCGTCGTGATCCC +
Preference number: 4 (lower is better)
Translates to: LSSSSSESHFLVCTDGATIQLIT*LLRRDP
Trigger: GGGATCACGACGCAGAAGCCAGGTTATCAGCTGGAT...GGTTGCGCCATCTGTGCACACTAAGAAATGGGACTCTGAACTGGAGCTGCTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CCA 90 bp CAAGTTGATCATAAAGCATTCCTTACGCGGAGATCTGGGCAAGGTAAAGAGTATGCGGCGGCCAAGTTCTaGTCCAGGCTCTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: QVDHKAFLTRRSGQGKEYAAAKF*SRLWLQ
Trigger: CTGGAGCCAGAGCCTGGACCAGAACTTGGCCGCCGC...ATACTCTTTACCTTGCCCAGATCTCCGCGTAAGGAATGCTTTATGATCAACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535787.5
CDS-3UTR CCA 90 bp TGTGCTGTCGGCAATGCAGTAAGTCTCCCAGAGCAACATTTTTCAACAAAGGGTTGGAGAAGGTGGGGGTaGTCCTGGGTCTTGAGTTGG +
Preference number: 4 (lower is better)
Translates to: CAVGNAVSLPEQHFSTKGWRRWG*SWVLSW
Trigger: CCAACTCAAGACCCAGGACCACCCCCACCTTCTCCA...ACCCTTTGTTGAAAAATGTTGCTCTGGGAGACTTACTGCATTGCCGACAGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR TCA 90 bp CTTAGCAGCTCCAGTTCAGAGTCCCATTTCTTAGTGTGCACAGATGGCGCAACCCTTTTGATGTCCCTGTaGGATATGGCAGGTTTGTGG +
Preference number: 4 (lower is better)
Translates to: LSSSSSESHFLVCTDGATLLMSL*DMAGLW
Trigger: CCACAAACCTGCCATATCTCACAGGGACATCAAAAG...GGTTGCGCCATCTGTGCACACTAAGAAATGGGACTCTGAACTGGAGCTGCTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CCA 90 bp ATGGTCTGCAGCACACAGACGCTATTACTCTTCTTTTCCTCCCTGCTTAAAGTCAGGTGGGGGTGGTCCTaGGTCTTGAGTTGGAACAAG +
Preference number: 4 (lower is better)
Translates to: MVCSTQTLLLFFSSLLKVRWGWS*VLSWNK
Trigger: CTTGTTCCAACTCAAGACCCAGGACCACCCCCACCT...GACTTTAAGCAGGGAGGAAAAGAAGAGTAATAGCGTCTGTGTGCTGCAGACCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR CCA 90 bp CTTAGCAGCTCCAGTTCAGAGTCCCATTTCTTAGTGTGCACAGATGGCGCAACCGATATGGCAGGTTTGTaGCCATCTTTTAGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: LSSSSSESHFLVCTDGATDMAGL*PSFRPG
Trigger: ACCTGGCCTAAAAGATGGCCACAAACCTGCCATATC...GGTTGCGCCATCTGTGCACACTAAGAAATGGGACTCTGAACTGGAGCTGCTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CCA 90 bp CTTAGCAGCTCCAGTTCAGAGTCCCATTTCTTAGTGTGCACAGATGGCGCAACCTGTCCCTGTGAGATATaGCAGGTTTGTGGCCATCTT +
Preference number: 4 (lower is better)
Translates to: LSSSSSESHFLVCTDGATCPCEI*QVCGHL
Trigger: AAGATGGCCACAAACCTGCCATATCTCACAGGGACA...GGTTGCGCCATCTGTGCACACTAAGAAATGGGACTCTGAACTGGAGCTGCTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR GCA 90 bp CTTAGCAGCTCCAGTTCAGAGTCCCATTTCTTAGTGTGCACAGATGGCGCAACCTATCGCCTGCAGACTTaGCAGCCTCAAATTTTAAGG +
Preference number: 4 (lower is better)
Translates to: LSSSSSESHFLVCTDGATYRLQT*QPQILR
Trigger: CCTTAAAATTTGAGGCTGGCAAGTCTGCAGGCGATA...GGTTGCGCCATCTGTGCACACTAAGAAATGGGACTCTGAACTGGAGCTGCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR GCA 90 bp TGTGCTGTCGGCAATGCAGTAAGTCTCCCAGAGCAACATTTTTCAACAAAGGGTCTGTGCTGTCGGCAATaGAGTAAGTCTCCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: CAVGNAVSLPEQHFSTKGLCCRQ*SKSPRA
Trigger: TGCTCTGGGAGACTTACTGCATTGCCGACAGCACAG...ACCCTTTGTTGAAAAATGTTGCTCTGGGAGACTTACTGCATTGCCGACAGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CCA 90 bp TGTGCTGTCGGCAATGCAGTAAGTCTCCCAGAGCAACATTTTTCAACAAAGGGTGTACCAACCTGTCCATaGGTATCGCCTGCAGACTTG +
Preference number: 4 (lower is better)
Translates to: CAVGNAVSLPEQHFSTKGVPTCP*VSPADL
Trigger: CAAGTCTGCAGGCGATACCCATGGACAGGTTGGTAC...ACCCTTTGTTGAAAAATGTTGCTCTGGGAGACTTACTGCATTGCCGACAGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
3UTR CAA 72 bp GCCGAACACTGGTTAATCCATCAGTCCTATGGCAAGTaGATCATAAAGCATTCCTTACGCGGAGATCTGGGC +
Preference number: 4 (lower is better)
Translates to: AEHWLIHQSYGK*IIKHSLRGDLG
Trigger: GCCCAGATCTCCGCGTAAGGAATGCTTTATGATCAACTTGCCATAGGACTGATGGATTAACCAGTGTTCGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR TCA 90 bp CCTTCACATCTGTGCTGTCGGCAATGCAGTAAGTCTCCCAGAGCAACATTTTTCTTGAAGTGGGCTGTGTaGCTTCCATCTCCGGAAAAT +
Preference number: 4 (lower is better)
Translates to: PSHLCCRQCSKSPRATFFLKWAV*LPSPEN
Trigger: ATTTTCCGGAGATGGAAGTCACACAGCCCACTTCAA...GAAAAATGTTGCTCTGGGAGACTTACTGCATTGCCGACAGCACAGATGTGAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR TCA 90 bp CCTTCACATCTGTGCTGTCGGCAATGCAGTAAGTCTCCCAGAGCAACATTTTTCCTTTTGATGTCCCTGTaGGATATGGCAGGTTTGTGG +
Preference number: 4 (lower is better)
Translates to: PSHLCCRQCSKSPRATFFLLMSL*DMAGLW
Trigger: CCACAAACCTGCCATATCTCACAGGGACATCAAAAG...GAAAAATGTTGCTCTGGGAGACTTACTGCATTGCCGACAGCACAGATGTGAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR TCA 90 bp TGTGCTGTCGGCAATGCAGTAAGTCTCCCAGAGCAACATTTTTCAACAAAGGGTGAGCAGCAGCAGTTCTaGTGGGTATCAGAAAGGCAA +
Preference number: 4 (lower is better)
Translates to: CAVGNAVSLPEQHFSTKGEQQQF*WVSERQ
Trigger: TTGCCTTTCTGATACCCATCAGAACTGCTGCTGCTC...ACCCTTTGTTGAAAAATGTTGCTCTGGGAGACTTACTGCATTGCCGACAGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR GCA 90 bp CCTTCACATCTGTGCTGTCGGCAATGCAGTAAGTCTCCCAGAGCAACATTTTTCTGTCCTTCACATCTGTaGTGTCGGCAATGCAGTAAG +
Preference number: 4 (lower is better)
Translates to: PSHLCCRQCSKSPRATFFCPSHL*CRQCSK
Trigger: CTTACTGCATTGCCGACAGCACAGATGTGAAGGACA...GAAAAATGTTGCTCTGGGAGACTTACTGCATTGCCGACAGCACAGATGTGAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CCA 90 bp CTGATGTCAGTTTTCAAACACTCCATTAGCCAGGTCCAAAAGATCCTTGATTTGTGGAGAAGGTGGGGGTaGTCCTGGGTCTTGAGTTGG +
Preference number: 4 (lower is better)
Translates to: LMSVFKHSISQVQKILDLWRRWG*SWVLSW
Trigger: CCAACTCAAGACCCAGGACCACCCCCACCTTCTCCA...CAAATCAAGGATCTTTTGGACCTGGCTAATGGAGTGTTTGAAAACTGACATCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CCA 90 bp CCTTCACATCTGTGCTGTCGGCAATGCAGTAAGTCTCCCAGAGCAACATTTTTCTCTCATAGCAGACAGTaGGGAATTCTGGGTAACGAC +
Preference number: 4 (lower is better)
Translates to: PSHLCCRQCSKSPRATFFSHSRQ*GILGND
Trigger: GTCGTTACCCAGAATTCCCCACTGTCTGCTATGAGA...GAAAAATGTTGCTCTGGGAGACTTACTGCATTGCCGACAGCACAGATGTGAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR TCA 90 bp ATGGTCTGCAGCACACAGACGCTATTACTCTTCTTTTCCTCCCTGCTTAAAGTCAGGTGTAACTGGATTTaGAGTGGGCTGTGTGACTTC +
Preference number: 4 (lower is better)
Translates to: MVCSTQTLLLFFSSLLKVRCNWI*SGLCDF
Trigger: GAAGTCACACAGCCCACTTCAAATCCAGTTACACCT...GACTTTAAGCAGGGAGGAAAAGAAGAGTAATAGCGTCTGTGTGCTGCAGACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR TCA 90 bp TGTGCTGTCGGCAATGCAGTAAGTCTCCCAGAGCAACATTTTTCAACAAAGGGTAGGTGTAACTGGATTTaGAGTGGGCTGTGTGACTTC +
Preference number: 4 (lower is better)
Translates to: CAVGNAVSLPEQHFSTKGRCNWI*SGLCDF
Trigger: GAAGTCACACAGCCCACTTCAAATCCAGTTACACCT...ACCCTTTGTTGAAAAATGTTGCTCTGGGAGACTTACTGCATTGCCGACAGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR TCA 90 bp GCCAGGTCCAAAAGATCCTTGATTTGGAGAGGGCTACATTCTTCATGTACACTTCTGGCTTCTGCGTCGTaGTCCCAACATTCTTCAATG +
Preference number: 4 (lower is better)
Translates to: ARSKRSLIWRGLHSSCTLLASAS*SQHSSM
Trigger: CATTGAAGAATGTTGGGATCACGACGCAGAAGCCAG...AAGTGTACATGAAGAATGTAGCCCTCTCCAAATCAAGGATCTTTTGGACCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR GCA 90 bp CACTCCATTAGCCAGGTCCAAAAGATCCTTGATTTGGAGAGGGCTACATTCTTCCCACATCAACACTGGTaGCTCGTTTTTCTGCACCAA +
Preference number: 4 (lower is better)
Translates to: HSISQVQKILDLERATFFPHQHW*LVFLHQ
Trigger: TTGGTGCAGAAAAACGAGGCACCAGTGTTGATGTGG...GAAGAATGTAGCCCTCTCCAAATCAAGGATCTTTTGGACCTGGCTAATGGAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR GCA 90 bp CAAGTTGATCATAAAGCATTCCTTACGCGGAGATCTGGGCAAGGTAAAGAGTATTCCATGGGTATCGCCTaGAGACTTGCCAGCCTCAAA +
Preference number: 4 (lower is better)
Translates to: QVDHKAFLTRRSGQGKEYSMGIA*RLASLK
Trigger: TTTGAGGCTGGCAAGTCTGCAGGCGATACCCATGGA...ATACTCTTTACCTTGCCCAGATCTCCGCGTAAGGAATGCTTTATGATCAACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR GCA 90 bp CACTCCATTAGCCAGGTCCAAAAGATCCTTGATTTGGAGAGGGCTACATTCTTCTCCCATTTCTTAGTGTaGACAGATGGCGCAACCATC +
Preference number: 4 (lower is better)
Translates to: HSISQVQKILDLERATFFSHFLV*TDGATI
Trigger: GATGGTTGCGCCATCTGTGCACACTAAGAAATGGGA...GAAGAATGTAGCCCTCTCCAAATCAAGGATCTTTTGGACCTGGCTAATGGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR GCA 90 bp ATGGTCTGCAGCACACAGACGCTATTACTCTTCTTTTCCTCCCTGCTTAAAGTCTGTCCTTCACATCTGTaGTGTCGGCAATGCAGTAAG +
Preference number: 4 (lower is better)
Translates to: MVCSTQTLLLFFSSLLKVCPSHL*CRQCSK
Trigger: CTTACTGCATTGCCGACAGCACAGATGTGAAGGACA...GACTTTAAGCAGGGAGGAAAAGAAGAGTAATAGCGTCTGTGTGCTGCAGACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR GCA 90 bp CTTAGCAGCTCCAGTTCAGAGTCCCATTTCTTAGTGTGCACAGATGGCGCAACCAAGCACTTTAGCACCTaGCTACCATCAATTCCATTT +
Preference number: 4 (lower is better)
Translates to: LSSSSSESHFLVCTDGATKHFST*LPSIPF
Trigger: AAATGGAATTGATGGTAGGCAGGTGCTAAAGTGCTT...GGTTGCGCCATCTGTGCACACTAAGAAATGGGACTCTGAACTGGAGCTGCTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR CCA 90 bp CCCACTTTGATGACTTTATGTACACAGAACAGCAGCACACTAAACATTCACAAGAGGTGGGGGTGGTCCTaGGTCTTGAGTTGGAACAAG +
Preference number: 4 (lower is better)
Translates to: PTLMTLCTQNSSTLNIHKRWGWS*VLSWNK
Trigger: CTTGTTCCAACTCAAGACCCAGGACCACCCCCACCT...CTTGTGAATGTTTAGTGTGCTGCTGTTCTGTGTACATAAAGTCATCAAAGTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CCA 90 bp TGTACACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTAGGTGGGGGTGGTCCTaGGTCTTGAGTTGGAACAAG +
Preference number: 4 (lower is better)
Translates to: CTQNSSTLNIHKLCHIGIRWGWS*VLSWNK
Trigger: CTTGTTCCAACTCAAGACCCAGGACCACCCCCACCT...AATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGTGTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CCA 90 bp TGTGCTGTCGGCAATGCAGTAAGTCTCCCAGAGCAACATTTTTCAACAAAGGGTGATCCACATCAACACTaGTGCCTCGTTTTTCTGCAC +
Preference number: 4 (lower is better)
Translates to: CAVGNAVSLPEQHFSTKGDPHQH*CLVFLH
Trigger: GTGCAGAAAAACGAGGCACCAGTGTTGATGTGGATC...ACCCTTTGTTGAAAAATGTTGCTCTGGGAGACTTACTGCATTGCCGACAGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CCA 90 bp CCTTCACATCTGTGCTGTCGGCAATGCAGTAAGTCTCCCAGAGCAACATTTTTCCATGTCTTCAAGAGATaGATGCTGGCCAATTTCCTC +
Preference number: 4 (lower is better)
Translates to: PSHLCCRQCSKSPRATFFHVFKR*MLANFL
Trigger: GAGGAAATTGGCCAGCATCCATCTCTTGAAGACATG...GAAAAATGTTGCTCTGGGAGACTTACTGCATTGCCGACAGCACAGATGTGAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR TCA 90 bp GCCAGGTCCAAAAGATCCTTGATTTGGAGAGGGCTACATTCTTCATGTACACTTTTGAAGTGGGCTGTGTaGCTTCCATCTCCGGAAAAT +
Preference number: 4 (lower is better)
Translates to: ARSKRSLIWRGLHSSCTLLKWAV*LPSPEN
Trigger: ATTTTCCGGAGATGGAAGTCACACAGCCCACTTCAA...AAGTGTACATGAAGAATGTAGCCCTCTCCAAATCAAGGATCTTTTGGACCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR TCA 90 bp CTTAGCAGCTCCAGTTCAGAGTCCCATTTCTTAGTGTGCACAGATGGCGCAACCGGAATTAGTGTCTTCTaGCAGACATTAAGAAATCTG +
Preference number: 4 (lower is better)
Translates to: LSSSSSESHFLVCTDGATGISVF*QTLRNL
Trigger: CAGATTTCTTAATGTCTGTCAGAAGACACTAATTCC...GGTTGCGCCATCTGTGCACACTAAGAAATGGGACTCTGAACTGGAGCTGCTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR TCA 90 bp CTTAGCAGCTCCAGTTCAGAGTCCCATTTCTTAGTGTGCACAGATGGCGCAACCAGACCAAGTACTTTGTaGAATAAAGAGGTGAACTCA +
Preference number: 4 (lower is better)
Translates to: LSSSSSESHFLVCTDGATRPSTL*NKEVNS
Trigger: TGAGTTCACCTCTTTATTTCACAAAGTACTTGGTCT...GGTTGCGCCATCTGTGCACACTAAGAAATGGGACTCTGAACTGGAGCTGCTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR TCA 90 bp GCCAGGTCCAAAAGATCCTTGATTTGGAGAGGGCTACATTCTTCATGTACACTTGGAGCACCATACACATaGGGAAAGAGTTATTTGGGG +
Preference number: 4 (lower is better)
Translates to: ARSKRSLIWRGLHSSCTLGAPYT*GKSYLG
Trigger: CCCCAAATAACTCTTTCCTCATGTGTATGGTGCTCC...AAGTGTACATGAAGAATGTAGCCCTCTCCAAATCAAGGATCTTTTGGACCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR TCA 90 bp CTTAGCAGCTCCAGTTCAGAGTCCCATTTCTTAGTGTGCACAGATGGCGCAACCAAACGTACTGCTGGTTaGATATCTGAGGTAAATGAT +
Preference number: 4 (lower is better)
Translates to: LSSSSSESHFLVCTDGATKRTAG*ISEVND
Trigger: ATCATTTACCTCAGATATTCAACCAGCAGTACGTTT...GGTTGCGCCATCTGTGCACACTAAGAAATGGGACTCTGAACTGGAGCTGCTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR GCA 90 bp GCCAGGTCCAAAAGATCCTTGATTTGGAGAGGGCTACATTCTTCATGTACACTTCCACATCAACACTGGTaGCTCGTTTTTCTGCACCAA +
Preference number: 4 (lower is better)
Translates to: ARSKRSLIWRGLHSSCTLPHQHW*LVFLHQ
Trigger: TTGGTGCAGAAAAACGAGGCACCAGTGTTGATGTGG...AAGTGTACATGAAGAATGTAGCCCTCTCCAAATCAAGGATCTTTTGGACCTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR GCA 90 bp CTTAGCAGCTCCAGTTCAGAGTCCCATTTCTTAGTGTGCACAGATGGCGCAACCTCTAGCCATGGTTTCTaGAATATGACACAGTTCATT +
Preference number: 4 (lower is better)
Translates to: LSSSSSESHFLVCTDGATSSHGF*NMTQFI
Trigger: AATGAACTGTGTCATATTGCAGAAACCATGGCTAGA...GGTTGCGCCATCTGTGCACACTAAGAAATGGGACTCTGAACTGGAGCTGCTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR GCA 90 bp CCTTCACATCTGTGCTGTCGGCAATGCAGTAAGTCTCCCAGAGCAACATTTTTCACCCAAAGTCAGCAATaGAAGCTGTCAGGTTGTTTT +
Preference number: 4 (lower is better)
Translates to: PSHLCCRQCSKSPRATFFTQSQQ*KLSGCF
Trigger: AAAACAACCTGACAGCTTGCATTGCTGACTTTGGGT...GAAAAATGTTGCTCTGGGAGACTTACTGCATTGCCGACAGCACAGATGTGAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR GCA 90 bp ATGGTCTGCAGCACACAGACGCTATTACTCTTCTTTTCCTCCCTGCTTAAAGTCTATCGCCTGCAGACTTaGCAGCCTCAAATTTTAAGG +
Preference number: 4 (lower is better)
Translates to: MVCSTQTLLLFFSSLLKVYRLQT*QPQILR
Trigger: CCTTAAAATTTGAGGCTGGCAAGTCTGCAGGCGATA...GACTTTAAGCAGGGAGGAAAAGAAGAGTAATAGCGTCTGTGTGCTGCAGACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR GCA 90 bp ACTGTACCCCACTTTGATGACTTTATGTACACAGAACAGCAGCACACTAAACATTCCATGGGTATCGCCTaGAGACTTGCCAGCCTCAAA +
Preference number: 4 (lower is better)
Translates to: TVPHFDDFMYTEQQHTKHSMGIA*RLASLK
Trigger: TTTGAGGCTGGCAAGTCTGCAGGCGATACCCATGGA...ATGTTTAGTGTGCTGCTGTTCTGTGTACATAAAGTCATCAAAGTGGGGTACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR GCA 90 bp CAAGTTGATCATAAAGCATTCCTTACGCGGAGATCTGGGCAAGGTAAAGAGTATATCTACAGGTCCATCTaGAGCAGTACAGCGAGAAGC +
Preference number: 4 (lower is better)
Translates to: QVDHKAFLTRRSGQGKEYIYRSI*SSTARS
Trigger: GCTTCTCGCTGTACTGCTGCAGATGGACCTGTAGAT...ATACTCTTTACCTTGCCCAGATCTCCGCGTAAGGAATGCTTTATGATCAACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR GCA 90 bp CTGATGTCAGTTTTCAAACACTCCATTAGCCAGGTCCAAAAGATCCTTGATTTGCTGTGCTGTCGGCAATaGAGTAAGTCTCCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: LMSVFKHSISQVQKILDLLCCRQ*SKSPRA
Trigger: TGCTCTGGGAGACTTACTGCATTGCCGACAGCACAG...CAAATCAAGGATCTTTTGGACCTGGCTAATGGAGTGTTTGAAAACTGACATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CCA 90 bp TGTACACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTGTACCAACCTGTCCATaGGTATCGCCTGCAGACTTG +
Preference number: 4 (lower is better)
Translates to: CTQNSSTLNIHKLCHIGIVPTCP*VSPADL
Trigger: CAAGTCTGCAGGCGATACCCATGGACAGGTTGGTAC...AATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGTGTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CCA 90 bp CTTAGCAGCTCCAGTTCAGAGTCCCATTTCTTAGTGTGCACAGATGGCGCAACCAAAAATGCATCCCTTTaGAAGTTTATAGCACCCTCT +
Preference number: 4 (lower is better)
Translates to: LSSSSSESHFLVCTDGATKNASL*KFIAPS
Trigger: AGAGGGTGCTATAAACTTCCAAAGGGATGCATTTTT...GGTTGCGCCATCTGTGCACACTAAGAAATGGGACTCTGAACTGGAGCTGCTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CCA 90 bp CACTCCATTAGCCAGGTCCAAAAGATCCTTGATTTGGAGAGGGCTACATTCTTCCATGTCTTCAAGAGATaGATGCTGGCCAATTTCCTC +
Preference number: 4 (lower is better)
Translates to: HSISQVQKILDLERATFFHVFKR*MLANFL
Trigger: GAGGAAATTGGCCAGCATCCATCTCTTGAAGACATG...GAAGAATGTAGCCCTCTCCAAATCAAGGATCTTTTGGACCTGGCTAATGGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CCA 90 bp TGTACACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTATCCAGCTGATAACCTaGCTTCTGCGTCGTGATCCC +
Preference number: 4 (lower is better)
Translates to: CTQNSSTLNIHKLCHIGIIQLIT*LLRRDP
Trigger: GGGATCACGACGCAGAAGCCAGGTTATCAGCTGGAT...AATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGTGTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CCA 90 bp TGTGCTGTCGGCAATGCAGTAAGTCTCCCAGAGCAACATTTTTCAACAAAGGGTCTTAGTGTGCACAGATaGCGCAACCATCATAGACTA +
Preference number: 4 (lower is better)
Translates to: CAVGNAVSLPEQHFSTKGLSVHR*RNHHRL
Trigger: TAGTCTATGATGGTTGCGCCATCTGTGCACACTAAG...ACCCTTTGTTGAAAAATGTTGCTCTGGGAGACTTACTGCATTGCCGACAGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CCA 90 bp CAAGTTGATCATAAAGCATTCCTTACGCGGAGATCTGGGCAAGGTAAAGAGTATGACAGTGGGGAATTCTaGGTAACGACACTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: QVDHKAFLTRRSGQGKEYDSGEF*VTTLPE
Trigger: CTCAGGAAGTGTCGTTACCCAGAATTCCCCACTGTC...ATACTCTTTACCTTGCCCAGATCTCCGCGTAAGGAATGCTTTATGATCAACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR CCA 90 bp GATGACTTTATGTACACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCACGTGACAGTTCTGAATaGTCTGCAGCACACAGACGC +
Preference number: 4 (lower is better)
Translates to: DDFMYTEQQHTKHSQAVSRDSSE*SAAHRR
Trigger: GCGTCTGTGTGCTGCAGACCATTCAGAACTGTCACG...TGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGTGTACATAAAGTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR TCA 90 bp TGTGCTGTCGGCAATGCAGTAAGTCTCCCAGAGCAACATTTTTCAACAAAGGGTGGTTCAACACCAGTTTaGTTGGTTCTGTCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: CAVGNAVSLPEQHFSTKGGSTPV*LVLSFS
Trigger: GGAAAAAGACAGAACCAATCAAACTGGTGTTGAACC...ACCCTTTGTTGAAAAATGTTGCTCTGGGAGACTTACTGCATTGCCGACAGCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000404590.1
CDS-3UTR TCA 90 bp ACTGTACCCCACTTTGATGACTTTATGTACACAGAACAGCAGCACACTAAACATCTGGCTTCTGCGTCGTaGTCCCAACATTCTTCAATG +
Preference number: 4 (lower is better)
Translates to: TVPHFDDFMYTEQQHTKHLASAS*SQHSSM
Trigger: CATTGAAGAATGTTGGGATCACGACGCAGAAGCCAG...ATGTTTAGTGTGCTGCTGTTCTGTGTACATAAAGTCATCAAAGTGGGGTACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR TCA 90 bp GATGACTTTATGTACACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCAGAGCAGCAGCAGTTCTaGTGGGTATCAGAAAGGCAA +
Preference number: 4 (lower is better)
Translates to: DDFMYTEQQHTKHSQAVSEQQQF*WVSERQ
Trigger: TTGCCTTTCTGATACCCATCAGAACTGCTGCTGCTC...TGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGTGTACATAAAGTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR GCA 90 bp CAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATAGTCATGGCAAACGCCAACTTTaGAGCAGCTCCCATTTTCCC +
Preference number: 4 (lower is better)
Translates to: QQHTKHSQAVSYWHYNSHGKRQL*SSSHFP
Trigger: GGGAAAATGGGAGCTGCTGCAAAGTTGGCGTTTGCC...ATGACTATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000404590.1
CDS-3UTR GCA 90 bp ACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATTCCATGGGTATCGCCTaGAGACTTGCCAGCCTCAAA +
Preference number: 4 (lower is better)
Translates to: TEQQHTKHSQAVSYWHYNSMGIA*RLASLK
Trigger: TTTGAGGCTGGCAAGTCTGCAGGCGATACCCATGGA...ATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR GCA 90 bp TGTACACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTATCTACAGGTCCATCTaGAGCAGTACAGCGAGAAGC +
Preference number: 4 (lower is better)
Translates to: CTQNSSTLNIHKLCHIGIIYRSI*SSTARS
Trigger: GCTTCTCGCTGTACTGCTGCAGATGGACCTGTAGAT...AATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGTGTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR GCA 90 bp GCCAGGTCCAAAAGATCCTTGATTTGGAGAGGGCTACATTCTTCATGTACACTTGGTTTCACAGAGCATTaGCATTCCAGCATGTTTCTG +
Preference number: 4 (lower is better)
Translates to: ARSKRSLIWRGLHSSCTLGFTEH*HSSMFL
Trigger: CAGAAACATGCTGGAATGGCAATGCTCTGTGAAACC...AAGTGTACATGAAGAATGTAGCCCTCTCCAAATCAAGGATCTTTTGGACCTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CCA 90 bp CACTCCATTAGCCAGGTCCAAAAGATCCTTGATTTGGAGAGGGCTACATTCTTCACACTGCTTTACGAATaGCCACTTATTGTTGGCACT +
Preference number: 4 (lower is better)
Translates to: HSISQVQKILDLERATFFTLLYE*PLIVGT
Trigger: AGTGCCAACAATAAGTGGCCATTCGTAAAGCAGTGT...GAAGAATGTAGCCCTCTCCAAATCAAGGATCTTTTGGACCTGGCTAATGGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR CCA 90 bp GAACAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATAGTCGTGACAGTTCTGAATaGTCTGCAGCACACAGACGC +
Preference number: 4 (lower is better)
Translates to: EQQHTKHSQAVSYWHYNSRDSSE*SAAHRR
Trigger: GCGTCTGTGTGCTGCAGACCATTCAGAACTGTCACG...ACTATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR CCA 90 bp GATGACTTTATGTACACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCAGAGGAAAGAGTTATTTaGGGGGTCTCAGTTTGCCCC +
Preference number: 4 (lower is better)
Translates to: DDFMYTEQQHTKHSQAVSEERVI*GVSVCP
Trigger: GGGGCAAACTGAGACCCCCCAAATAACTCTTTCCTC...TGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGTGTACATAAAGTCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR TCA 90 bp CTGATGTCAGTTTTCAAACACTCCATTAGCCAGGTCCAAAAGATCCTTGATTTGTTGAAGTGGGCTGTGTaGCTTCCATCTCCGGAAAAT +
Preference number: 4 (lower is better)
Translates to: LMSVFKHSISQVQKILDLLKWAV*LPSPEN
Trigger: ATTTTCCGGAGATGGAAGTCACACAGCCCACTTCAA...CAAATCAAGGATCTTTTGGACCTGGCTAATGGAGTGTTTGAAAACTGACATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR TCA 90 bp TGTGCTGTCGGCAATGCAGTAAGTCTCCCAGAGCAACATTTTTCAACAAAGGGTTTTCATGAAATGCTGTaGTCAGCCAAAGATCCACAT +
Preference number: 4 (lower is better)
Translates to: CAVGNAVSLPEQHFSTKGFHEML*SAKDPH
Trigger: ATGTGGATCTTTGGCTGATCACAGCATTTCATGAAA...ACCCTTTGTTGAAAAATGTTGCTCTGGGAGACTTACTGCATTGCCGACAGCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR TCA 90 bp ATGGTCTGCAGCACACAGACGCTATTACTCTTCTTTTCCTCCCTGCTTAAAGTCATGGTTTCTGCAATATaGCACAGTTCATTCCAAGAG +
Preference number: 4 (lower is better)
Translates to: MVCSTQTLLLFFSSLLKVMVSAI*HSSFQE
Trigger: CTCTTGGAATGAACTGTGTCATATTGCAGAAACCAT...GACTTTAAGCAGGGAGGAAAAGAAGAGTAATAGCGTCTGTGTGCTGCAGACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR TCA 90 bp AAGTTGATCATAAAGCATTCCTTACGCGGAGATCTGGGCAAGGTAAAGAGTATACTTTTGATGTCCCTGTaGGATATGGCAGGTTTGTGG +
Preference number: 4 (lower is better)
Translates to: KLIIKHSLRGDLGKVKSILLMSL*DMAGLW
Trigger: CCACAAACCTGCCATATCTCACAGGGACATCAAAAG...TATACTCTTTACCTTGCCCAGATCTCCGCGTAAGGAATGCTTTATGATCAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR TCA 90 bp ATGGTCTGCAGCACACAGACGCTATTACTCTTCTTTTCCTCCCTGCTTAAAGTCGCACATTTTTACTTTTaGTGTCCCTGTGAGATATGG +
Preference number: 4 (lower is better)
Translates to: MVCSTQTLLLFFSSLLKVAHFYF*CPCEIW
Trigger: CCATATCTCACAGGGACATCAAAAGTAAAAATGTGC...GACTTTAAGCAGGGAGGAAAAGAAGAGTAATAGCGTCTGTGTGCTGCAGACCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR TCA 90 bp GAACAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATAGTCTGGCTTCTGCGTCGTaGTCCCAACATTCTTCAATG +
Preference number: 4 (lower is better)
Translates to: EQQHTKHSQAVSYWHYNSLASAS*SQHSSM
Trigger: CATTGAAGAATGTTGGGATCACGACGCAGAAGCCAG...ACTATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR TCA 90 bp GCCAGGTCCAAAAGATCCTTGATTTGGAGAGGGCTACATTCTTCATGTACACTTCATTTGTCACCATTGTaGCCACTGTTACAATGTCCT +
Preference number: 4 (lower is better)
Translates to: ARSKRSLIWRGLHSSCTLHLSPL*PLLQCP
Trigger: AGGACATTGTAACAGTGGTCACAATGGTGACAAATG...AAGTGTACATGAAGAATGTAGCCCTCTCCAAATCAAGGATCTTTTGGACCTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR TCA 90 bp AAGTTGATCATAAAGCATTCCTTACGCGGAGATCTGGGCAAGGTAAAGAGTATAGGAGCACCATACACATaGGGAAAGAGTTATTTGGGG +
Preference number: 4 (lower is better)
Translates to: KLIIKHSLRGDLGKVKSIGAPYT*GKSYLG
Trigger: CCCCAAATAACTCTTTCCTCATGTGTATGGTGCTCC...TATACTCTTTACCTTGCCCAGATCTCCGCGTAAGGAATGCTTTATGATCAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR GCA 90 bp CTGATGTCAGTTTTCAAACACTCCATTAGCCAGGTCCAAAAGATCCTTGATTTGCCACATCAACACTGGTaGCTCGTTTTTCTGCACCAA +
Preference number: 4 (lower is better)
Translates to: LMSVFKHSISQVQKILDLPHQHW*LVFLHQ
Trigger: TTGGTGCAGAAAAACGAGGCACCAGTGTTGATGTGG...CAAATCAAGGATCTTTTGGACCTGGCTAATGGAGTGTTTGAAAACTGACATCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR GCA 90 bp TGTACACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTTCCCATTTCTTAGTGTaGACAGATGGCGCAACCATC +
Preference number: 4 (lower is better)
Translates to: CTQNSSTLNIHKLCHIGISHFLV*TDGATI
Trigger: GATGGTTGCGCCATCTGTGCACACTAAGAAATGGGA...AATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGTGTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR GCA 90 bp ACTGTACCCCACTTTGATGACTTTATGTACACAGAACAGCAGCACACTAAACATTCCCATTTCTTAGTGTaGACAGATGGCGCAACCATC +
Preference number: 4 (lower is better)
Translates to: TVPHFDDFMYTEQQHTKHSHFLV*TDGATI
Trigger: GATGGTTGCGCCATCTGTGCACACTAAGAAATGGGA...ATGTTTAGTGTGCTGCTGTTCTGTGTACATAAAGTCATCAAAGTGGGGTACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR GCA 90 bp AGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATAGTCATTCTGTGCTGTCGGCAATaGAGTAAGTCTCCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: SSTLNIHKLCHIGITIVILCCRQ*SKSPRA
Trigger: TGCTCTGGGAGACTTACTGCATTGCCGACAGCACAG...AATGACTATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR GCA 90 bp CAAGTTGATCATAAAGCATTCCTTACGCGGAGATCTGGGCAAGGTAAAGAGTATGAGGAGGCTAGGCTATaGTACCTATATCAACATTGG +
Preference number: 4 (lower is better)
Translates to: QVDHKAFLTRRSGQGKEYEEARL*YLYQHW
Trigger: CCAATGTTGATATAGGTAGCATAGCCTAGCCTCCTC...ATACTCTTTACCTTGCCCAGATCTCCGCGTAAGGAATGCTTTATGATCAACTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR CCA 90 bp TGTACACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTAGATATCCAGTTCCCTaGGTCTTCCTCGGAGACAAA +
Preference number: 4 (lower is better)
Translates to: CTQNSSTLNIHKLCHIGIRYPVP*VFLGDK
Trigger: TTTGTCTCCGAGGAAGACCCAGGGAACTGGATATCT...AATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGTGTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000404590.1
CDS-3UTR CCA 90 bp GATGACTTTATGTACACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCAAGATATCCAGTTCCCTaGGTCTTCCTCGGAGACAAA +
Preference number: 4 (lower is better)
Translates to: DDFMYTEQQHTKHSQAVSRYPVP*VFLGDK
Trigger: TTTGTCTCCGAGGAAGACCCAGGGAACTGGATATCT...TGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGTGTACATAAAGTCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000404590.1
CDS-3UTR CCA 90 bp ATGGTCTGCAGCACACAGACGCTATTACTCTTCTTTTCCTCCCTGCTTAAAGTCGATGTTGTAATAGGGTaGCTTAGGTGTAACTGGATT +
Preference number: 4 (lower is better)
Translates to: MVCSTQTLLLFFSSLLKVDVVIG*LRCNWI
Trigger: AATCCAGTTACACCTAAGCCACCCTATTACAACATC...GACTTTAAGCAGGGAGGAAAAGAAGAGTAATAGCGTCTGTGTGCTGCAGACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR CCA 90 bp CTGATGTCAGTTTTCAAACACTCCATTAGCCAGGTCCAAAAGATCCTTGATTTGGATATGGCAGGTTTGTaGCCATCTTTTAGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: LMSVFKHSISQVQKILDLDMAGL*PSFRPG
Trigger: ACCTGGCCTAAAAGATGGCCACAAACCTGCCATATC...CAAATCAAGGATCTTTTGGACCTGGCTAATGGAGTGTTTGAAAACTGACATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CCA 90 bp CTGATGTCAGTTTTCAAACACTCCATTAGCCAGGTCCAAAAGATCCTTGATTTGTGTCCCTGTGAGATATaGCAGGTTTGTGGCCATCTT +
Preference number: 4 (lower is better)
Translates to: LMSVFKHSISQVQKILDLCPCEI*QVCGHL
Trigger: AAGATGGCCACAAACCTGCCATATCTCACAGGGACA...CAAATCAAGGATCTTTTGGACCTGGCTAATGGAGTGTTTGAAAACTGACATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CCA 90 bp AAGTTGATCATAAAGCATTCCTTACGCGGAGATCTGGGCAAGGTAAAGAGTATATGTCCCTGTGAGATATaGCAGGTTTGTGGCCATCTT +
Preference number: 4 (lower is better)
Translates to: KLIIKHSLRGDLGKVKSICPCEI*QVCGHL
Trigger: AAGATGGCCACAAACCTGCCATATCTCACAGGGACA...TATACTCTTTACCTTGCCCAGATCTCCGCGTAAGGAATGCTTTATGATCAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR CCA 90 bp AGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATAGTCATTGTACCAACCTGTCCATaGGTATCGCCTGCAGACTTG +
Preference number: 4 (lower is better)
Translates to: SSTLNIHKLCHIGITIVIVPTCP*VSPADL
Trigger: CAAGTCTGCAGGCGATACCCATGGACAGGTTGGTAC...AATGACTATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CCA 90 bp GCCAGGTCCAAAAGATCCTTGATTTGGAGAGGGCTACATTCTTCATGTACACTTCCCAACATTCTTCAATaGTTTCACAGAGCATTGCCA +
Preference number: 4 (lower is better)
Translates to: ARSKRSLIWRGLHSSCTLPNILQ*FHRALP
Trigger: TGGCAATGCTCTGTGAAACCATTGAAGAATGTTGGG...AAGTGTACATGAAGAATGTAGCCCTCTCCAAATCAAGGATCTTTTGGACCTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CCA 90 bp AGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATAGTCATTATCCAGCTGATAACCTaGCTTCTGCGTCGTGATCCC +
Preference number: 4 (lower is better)
Translates to: SSTLNIHKLCHIGITIVIIQLIT*LLRRDP
Trigger: GGGATCACGACGCAGAAGCCAGGTTATCAGCTGGAT...AATGACTATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CCA 90 bp TGTGCTGTCGGCAATGCAGTAAGTCTCCCAGAGCAACATTTTTCAACAAAGGGTGTTAGTCTCTGCATCTaGGTAATTCTTTCACCTACA +
Preference number: 4 (lower is better)
Translates to: CAVGNAVSLPEQHFSTKGVSLCI*VILSPT
Trigger: TGTAGGTGAAAGAATTACCCAGATGCAGAGACTAAC...ACCCTTTGTTGAAAAATGTTGCTCTGGGAGACTTACTGCATTGCCGACAGCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CCA 90 bp GCCAGGTCCAAAAGATCCTTGATTTGGAGAGGGCTACATTCTTCATGTACACTTACACTGCTTTACGAATaGCCACTTATTGTTGGCACT +
Preference number: 4 (lower is better)
Translates to: ARSKRSLIWRGLHSSCTLTLLYE*PLIVGT
Trigger: AGTGCCAACAATAAGTGGCCATTCGTAAAGCAGTGT...AAGTGTACATGAAGAATGTAGCCCTCTCCAAATCAAGGATCTTTTGGACCTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR CCA 90 bp ATGACTTTATGTACACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCATGACAGTGGGGAATTCTaGGTAACGACACTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: MTLCTQNSSTLNIHKLCHDSGEF*VTTLPE
Trigger: CTCAGGAAGTGTCGTTACCCAGAATTCCCCACTGTC...ATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGTGTACATAAAGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR CCA 90 bp TGTACACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTTCTCATAGCAGACAGTaGGGAATTCTGGGTAACGAC +
Preference number: 4 (lower is better)
Translates to: CTQNSSTLNIHKLCHIGISHSRQ*GILGND
Trigger: GTCGTTACCCAGAATTCCCCACTGTCTGCTATGAGA...AATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGTGTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR CCA 90 bp ATGACTTTATGTACACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCATGAGGAAAGAGTTATTTaGGGGGTCTCAGTTTGCCCC +
Preference number: 4 (lower is better)
Translates to: MTLCTQNSSTLNIHKLCHEERVI*GVSVCP
Trigger: GGGGCAAACTGAGACCCCCCAAATAACTCTTTCCTC...ATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGTGTACATAAAGTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR CCA 90 bp CCTTCACATCTGTGCTGTCGGCAATGCAGTAAGTCTCCCAGAGCAACATTTTTCTATTTAACTTGGGGATaGAATGGGGATAGCATACAT +
Preference number: 4 (lower is better)
Translates to: PSHLCCRQCSKSPRATFFYLTWG*NGDSIH
Trigger: ATGTATGCTATCCCCATTCCATCCCCAAGTTAAATA...GAAAAATGTTGCTCTGGGAGACTTACTGCATTGCCGACAGCACAGATGTGAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR TCA 90 bp CAAGTTGATCATAAAGCATTCCTTACGCGGAGATCTGGGCAAGGTAAAGAGTATGGTTCAACACCAGTTTaGTTGGTTCTGTCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: QVDHKAFLTRRSGQGKEYGSTPV*LVLSFS
Trigger: GGAAAAAGACAGAACCAATCAAACTGGTGTTGAACC...ATACTCTTTACCTTGCCCAGATCTCCGCGTAAGGAATGCTTTATGATCAACTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000241416.12
CDS-3UTR TCA 90 bp CTGATGTCAGTTTTCAAACACTCCATTAGCCAGGTCCAAAAGATCCTTGATTTGTCCTGTCATAGCAGTTaGTATCATCCAGCCAACAAC +
Preference number: 4 (lower is better)
Translates to: LMSVFKHSISQVQKILDLSCHSS*YHPANN
Trigger: GTTGTTGGCTGGATGATATCAACTGCTATGACAGGA...CAAATCAAGGATCTTTTGGACCTGGCTAATGGAGTGTTTGAAAACTGACATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR TCA 90 bp ACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATAGGTGTAACTGGATTTaGAGTGGGCTGTGTGACTTC +
Preference number: 4 (lower is better)
Translates to: TEQQHTKHSQAVSYWHYNRCNWI*SGLCDF
Trigger: GAAGTCACACAGCCCACTTCAAATCCAGTTACACCT...ATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR TCA 90 bp ACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATGGTAACGACACTTCCTaGGGTGATCCTAAAACAGTG +
Preference number: 4 (lower is better)
Translates to: TEQQHTKHSQAVSYWHYNGNDTS*GDPKTV
Trigger: CACTGTTTTAGGATCACCTCAGGAAGTGTCGTTACC...ATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR TCA 90 bp CAAGTTGATCATAAAGCATTCCTTACGCGGAGATCTGGGCAAGGTAAAGAGTATCATCAAATATTACTCTaGCAAGATGGCACCAAGCAG +
Preference number: 4 (lower is better)
Translates to: QVDHKAFLTRRSGQGKEYHQILL*QDGTKQ
Trigger: CTGCTTGGTGCCATCTTGTCAGAGTAATATTTGATG...ATACTCTTTACCTTGCCCAGATCTCCGCGTAAGGAATGCTTTATGATCAACTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR TCA 90 bp CCCACTTTGATGACTTTATGTACACAGAACAGCAGCACACTAAACATTCACAAGTTGCTAGGAATACAATaGATGAGACCATGGGGACAC +
Preference number: 4 (lower is better)
Translates to: PTLMTLCTQNSSTLNIHKLLGIQ*MRPWGH
Trigger: GTGTCCCCATGGTCTCATTCATTGTATTCCTAGCAA...CTTGTGAATGTTTAGTGTGCTGCTGTTCTGTGTACATAAAGTCATCAAAGTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR TCA 90 bp AAGTTGATCATAAAGCATTCCTTACGCGGAGATCTGGGCAAGGTAAAGAGTATATTGCTAGGAATACAATaGATGAGACCATGGGGACAC +
Preference number: 4 (lower is better)
Translates to: KLIIKHSLRGDLGKVKSILLGIQ*MRPWGH
Trigger: GTGTCCCCATGGTCTCATTCATTGTATTCCTAGCAA...TATACTCTTTACCTTGCCCAGATCTCCGCGTAAGGAATGCTTTATGATCAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR TCA 90 bp CACTCCATTAGCCAGGTCCAAAAGATCCTTGATTTGGAGAGGGCTACATTCTTCTGCTTACCAATATTCTaGGAGGTAACAAATGGGATA +
Preference number: 4 (lower is better)
Translates to: HSISQVQKILDLERATFFCLPIF*EVTNGI
Trigger: TATCCCATTTGTTACCTCTCAGAATATTGGTAAGCA...GAAGAATGTAGCCCTCTCCAAATCAAGGATCTTTTGGACCTGGCTAATGGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR GCA 90 bp CAAGTTGATCATAAAGCATTCCTTACGCGGAGATCTGGGCAAGGTAAAGAGTATCAGGTAGCAAAACAATaGCGCCGTTTATCTTTGTCA +
Preference number: 4 (lower is better)
Translates to: QVDHKAFLTRRSGQGKEYQVAKQ*RRLSLS
Trigger: TGACAAAGATAAACGGCGGCATTGTTTTGCTACCTG...ATACTCTTTACCTTGCCCAGATCTCCGCGTAAGGAATGCTTTATGATCAACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR GCA 90 bp ATGACTTTATGTACACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCATCCTGTACACCCAAAATaGACAAATGACAATCCCCGC +
Preference number: 4 (lower is better)
Translates to: MTLCTQNSSTLNIHKLCHPVHPK*TNDNPR
Trigger: GCGGGGATTGTCATTTGTGCATTTTGGGTGTACAGG...ATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGTGTACATAAAGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR GCA 90 bp TGTGCTGTCGGCAATGCAGTAAGTCTCCCAGAGCAACATTTTTCAACAAAGGGTTGTAATATGTTCTCATaGTTCATTCCAGGCAAACTG +
Preference number: 4 (lower is better)
Translates to: CAVGNAVSLPEQHFSTKGCNMFS*FIPGKL
Trigger: CAGTTTGCCTGGAATGAAGCATGAGAACATATTACA...ACCCTTTGTTGAAAAATGTTGCTCTGGGAGACTTACTGCATTGCCGACAGCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR GCA 90 bp GCCAGGTCCAAAAGATCCTTGATTTGGAGAGGGCTACATTCTTCATGTACACTTACCCTTTTCATGAAATaGTGTGATCAGCCAAAGATC +
Preference number: 4 (lower is better)
Translates to: ARSKRSLIWRGLHSSCTLTLFMK*CDQPKI
Trigger: GATCTTTGGCTGATCACAGCATTTCATGAAAAGGGT...AAGTGTACATGAAGAATGTAGCCCTCTCCAAATCAAGGATCTTTTGGACCTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR GCA 90 bp TGTACACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTTATCGCCTGCAGACTTaGCAGCCTCAAATTTTAAGG +
Preference number: 4 (lower is better)
Translates to: CTQNSSTLNIHKLCHIGIYRLQT*QPQILR
Trigger: CCTTAAAATTTGAGGCTGGCAAGTCTGCAGGCGATA...AATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGTGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR GCA 90 bp AGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATAGTCATTATCTACAGGTCCATCTaGAGCAGTACAGCGAGAAGC +
Preference number: 4 (lower is better)
Translates to: SSTLNIHKLCHIGITIVIIYRSI*SSTARS
Trigger: GCTTCTCGCTGTACTGCTGCAGATGGACCTGTAGAT...AATGACTATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR GCA 90 bp CTGATGTCAGTTTTCAAACACTCCATTAGCCAGGTCCAAAAGATCCTTGATTTGGGTTTCACAGAGCATTaGCATTCCAGCATGTTTCTG +
Preference number: 4 (lower is better)
Translates to: LMSVFKHSISQVQKILDLGFTEH*HSSMFL
Trigger: CAGAAACATGCTGGAATGGCAATGCTCTGTGAAACC...CAAATCAAGGATCTTTTGGACCTGGCTAATGGAGTGTTTGAAAACTGACATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CCA 90 bp CCCACTTTGATGACTTTATGTACACAGAACAGCAGCACACTAAACATTCACAAGCGGAGACAAACCTCCTaGTGTAAAATCAACCGTCAT +
Preference number: 4 (lower is better)
Translates to: PTLMTLCTQNSSTLNIHKRRQTS*CKINRH
Trigger: ATGACGGTTGATTTTACACCAGGAGGTTTGTCTCCG...CTTGTGAATGTTTAGTGTGCTGCTGTTCTGTGTACATAAAGTCATCAAAGTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241416.12
CDS-3UTR CCA 90 bp ACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATGATCCACATCAACACTaGTGCCTCGTTTTTCTGCAC +
Preference number: 4 (lower is better)
Translates to: TEQQHTKHSQAVSYWHYNDPHQH*CLVFLH
Trigger: GTGCAGAAAAACGAGGCACCAGTGTTGATGTGGATC...ATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CCA 90 bp GAACAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATAGTGATCCACATCAACACTaGTGCCTCGTTTTTCTGCAC +
Preference number: 4 (lower is better)
Translates to: EQQHTKHSQAVSYWHYNSDPHQH*CLVFLH
Trigger: GTGCAGAAAAACGAGGCACCAGTGTTGATGTGGATC...ACTATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CCA 90 bp CAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATAGTCATGATATGGCAGGTTTGTaGCCATCTTTTAGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: QQHTKHSQAVSYWHYNSHDMAGL*PSFRPG
Trigger: ACCTGGCCTAAAAGATGGCCACAAACCTGCCATATC...ATGACTATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CCA 90 bp AAGTTGATCATAAAGCATTCCTTACGCGGAGATCTGGGCAAGGTAAAGAGTATACTTAGTGTGCACAGATaGCGCAACCATCATAGACTA +
Preference number: 4 (lower is better)
Translates to: KLIIKHSLRGDLGKVKSILSVHR*RNHHRL
Trigger: TAGTCTATGATGGTTGCGCCATCTGTGCACACTAAG...TATACTCTTTACCTTGCCCAGATCTCCGCGTAAGGAATGCTTTATGATCAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR CCA 90 bp GATGACTTTATGTACACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCACTTAGTGTGCACAGATaGCGCAACCATCATAGACTA +
Preference number: 4 (lower is better)
Translates to: DDFMYTEQQHTKHSQAVSLSVHR*RNHHRL
Trigger: TAGTCTATGATGGTTGCGCCATCTGTGCACACTAAG...TGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGTGTACATAAAGTCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CCA 90 bp CACTCCATTAGCCAGGTCCAAAAGATCCTTGATTTGGAGAGGGCTACATTCTTCAATAAAGCCGAACACTaGTTAATCCATCAGTCCTAT +
Preference number: 4 (lower is better)
Translates to: HSISQVQKILDLERATFFNKAEH*LIHQSY
Trigger: ATAGGACTGATGGATTAACCAGTGTTCGGCTTTATT...GAAGAATGTAGCCCTCTCCAAATCAAGGATCTTTTGGACCTGGCTAATGGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR CCA 90 bp CAAGTTGATCATAAAGCATTCCTTACGCGGAGATCTGGGCAAGGTAAAGAGTATCAACACCAGTTTGATTaGTTCTGTCTTCAACCCAGA +
Preference number: 4 (lower is better)
Translates to: QVDHKAFLTRRSGQGKEYQHQFD*FCLQPR
Trigger: TCTGGGTTGAAGACAGAACCAATCAAACTGGTGTTG...ATACTCTTTACCTTGCCCAGATCTCCGCGTAAGGAATGCTTTATGATCAACTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535787.5
CDS-3UTR TCA 90 bp GATGACTTTATGTACACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCACCCAAAATGCACAAATaGCAATCCCCGCAATTAACA +
Preference number: 4 (lower is better)
Translates to: DDFMYTEQQHTKHSQAVSPKMHK*QSPQLT
Trigger: TGTTAATTGCGGGGATTGTCATTTGTGCATTTTGGG...TGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGTGTACATAAAGTCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR TCA 90 bp CAAGTTGATCATAAAGCATTCCTTACGCGGAGATCTGGGCAAGGTAAAGAGTATTTTCATGAAATGCTGTaGTCAGCCAAAGATCCACAT +
Preference number: 4 (lower is better)
Translates to: QVDHKAFLTRRSGQGKEYFHEML*SAKDPH
Trigger: ATGTGGATCTTTGGCTGATCACAGCATTTCATGAAA...ATACTCTTTACCTTGCCCAGATCTCCGCGTAAGGAATGCTTTATGATCAACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR TCA 90 bp CCCACTTTGATGACTTTATGTACACAGAACAGCAGCACACTAAACATTCACAAGCATTTGTCACCATTGTaGCCACTGTTACAATGTCCT +
Preference number: 4 (lower is better)
Translates to: PTLMTLCTQNSSTLNIHKHLSPL*PLLQCP
Trigger: AGGACATTGTAACAGTGGTCACAATGGTGACAAATG...CTTGTGAATGTTTAGTGTGCTGCTGTTCTGTGTACATAAAGTCATCAAAGTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR TCA 90 bp CAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATAGTCATGGTTCAACACCAGTTTaGTTGGTTCTGTCTTCAACC +
Preference number: 4 (lower is better)
Translates to: QQHTKHSQAVSYWHYNSHGSTPV*LVLSST
Trigger: GGTTGAAGACAGAACCAATCAAACTGGTGTTGAACC...ATGACTATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535787.5
CDS-3UTR GCA 90 bp CTGATGTCAGTTTTCAAACACTCCATTAGCCAGGTCCAAAAGATCCTTGATTTGCAGGTAGCAAAACAATaGCGCCGTTTATCTTTGTCA +
Preference number: 4 (lower is better)
Translates to: LMSVFKHSISQVQKILDLQVAKQ*RRLSLS
Trigger: TGACAAAGATAAACGGCGGCATTGTTTTGCTACCTG...CAAATCAAGGATCTTTTGGACCTGGCTAATGGAGTGTTTGAAAACTGACATCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR GCA 90 bp ACTGTACCCCACTTTGATGACTTTATGTACACAGAACAGCAGCACACTAAACATCAGGTAGCAAAACAATaGCGCCGTTTATCTTTGTCA +
Preference number: 4 (lower is better)
Translates to: TVPHFDDFMYTEQQHTKHQVAKQ*RRLSLS
Trigger: TGACAAAGATAAACGGCGGCATTGTTTTGCTACCTG...ATGTTTAGTGTGCTGCTGTTCTGTGTACATAAAGTCATCAAAGTGGGGTACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR GCA 90 bp GATGACTTTATGTACACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCAACCCAAAGTCAGCAATaGAAGCTGTCAGGTTGTTTT +
Preference number: 4 (lower is better)
Translates to: DDFMYTEQQHTKHSQAVSTQSQQ*KLSGCF
Trigger: AAAACAACCTGACAGCTTGCATTGCTGACTTTGGGT...TGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGTGTACATAAAGTCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR GCA 90 bp ACTGTACCCCACTTTGATGACTTTATGTACACAGAACAGCAGCACACTAAACATACCCAAAGTCAGCAATaGAAGCTGTCAGGTTGTTTT +
Preference number: 4 (lower is better)
Translates to: TVPHFDDFMYTEQQHTKHTQSQQ*KLSGCF
Trigger: AAAACAACCTGACAGCTTGCATTGCTGACTTTGGGT...ATGTTTAGTGTGCTGCTGTTCTGTGTACATAAAGTCATCAAAGTGGGGTACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR GCA 90 bp CCCACTTTGATGACTTTATGTACACAGAACAGCAGCACACTAAACATTCACAAGTGCACAACAACTTCCTaGATGTCTTCAAGAGATGGA +
Preference number: 4 (lower is better)
Translates to: PTLMTLCTQNSSTLNIHKCTTTS*MSSRDG
Trigger: TCCATCTCTTGAAGACATGCAGGAAGTTGTTGTGCA...CTTGTGAATGTTTAGTGTGCTGCTGTTCTGTGTACATAAAGTCATCAAAGTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR GCA 90 bp ACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATGAGGAGGCTAGGCTATaGTACCTATATCAACATTGG +
Preference number: 4 (lower is better)
Translates to: TEQQHTKHSQAVSYWHYNEEARL*YLYQHW
Trigger: CCAATGTTGATATAGGTAGCATAGCCTAGCCTCCTC...ATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR GCA 90 bp GATGACTTTATGTACACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCAAACTTTCTGTTAACTTaGCCACTCTGCACTGACTGT +
Preference number: 4 (lower is better)
Translates to: DDFMYTEQQHTKHSQAVSNFLLT*PLCTDC
Trigger: ACAGTCAGTGCAGAGTGGGCAAGTTAACAGAAAGTT...TGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGTGTACATAAAGTCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR GCA 90 bp CTGATGTCAGTTTTCAAACACTCCATTAGCCAGGTCCAAAAGATCCTTGATTTGAACTTTCTGTTAACTTaGCCACTCTGCACTGACTGT +
Preference number: 4 (lower is better)
Translates to: LMSVFKHSISQVQKILDLNFLLT*PLCTDC
Trigger: ACAGTCAGTGCAGAGTGGGCAAGTTAACAGAAAGTT...CAAATCAAGGATCTTTTGGACCTGGCTAATGGAGTGTTTGAAAACTGACATCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR CCA 90 bp CCCACTTTGATGACTTTATGTACACAGAACAGCAGCACACTAAACATTCACAAGCCCAACATTCTTCAATaGTTTCACAGAGCATTGCCA +
Preference number: 4 (lower is better)
Translates to: PTLMTLCTQNSSTLNIHKPNILQ*FHRALP
Trigger: TGGCAATGCTCTGTGAAACCATTGAAGAATGTTGGG...CTTGTGAATGTTTAGTGTGCTGCTGTTCTGTGTACATAAAGTCATCAAAGTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR TCA 90 bp ACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATCCCAAAATGCACAAATaGCAATCCCCGCAATTAACA +
Preference number: 4 (lower is better)
Translates to: TEQQHTKHSQAVSYWHYNPKMHK*QSPQLT
Trigger: TGTTAATTGCGGGGATTGTCATTTGTGCATTTTGGG...ATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR TCA 90 bp GAACAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATAGTAGTGAACCCTTTTCATaGAATGCTGTGATCAGCCAA +
Preference number: 4 (lower is better)
Translates to: EQQHTKHSQAVSYWHYNSSEPFS*NAVISQ
Trigger: TTGGCTGATCACAGCATTTCATGAAAAGGGTTCACT...ACTATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR TCA 90 bp GATGACTTTATGTACACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCAATGGTTTCTGCAATATaGCACAGTTCATTCCAAGAG +
Preference number: 4 (lower is better)
Translates to: DDFMYTEQQHTKHSQAVSMVSAI*HSSFQE
Trigger: CTCTTGGAATGAACTGTGTCATATTGCAGAAACCAT...TGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGTGTACATAAAGTCATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR TCA 90 bp CAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATAGTCATCATCAAATATTACTCTaGCAAGATGGCACCAAGCAG +
Preference number: 4 (lower is better)
Translates to: QQHTKHSQAVSYWHYNSHHQILL*QDGTKQ
Trigger: CTGCTTGGTGCCATCTTGTCAGAGTAATATTTGATG...ATGACTATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR TCA 90 bp TGTACACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACCAGATCAAGAAATTaGGAGACCAAGTACTTTGTG +
Preference number: 4 (lower is better)
Translates to: CTQNSSTLNIHKLCHIGITRSRN*ETKYFV
Trigger: CACAAAGTACTTGGTCTCTCAATTTCTTGATCTGGT...AATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGTGTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR GCA 90 bp GCCAGGTCCAAAAGATCCTTGATTTGGAGAGGGCTACATTCTTCATGTACACTTTTCACTTCTAATAACTaGAGTGGTTTCAAACCTAGT +
Preference number: 4 (lower is better)
Translates to: ARSKRSLIWRGLHSSCTLFTSNN*SGFKPS
Trigger: ACTAGGTTTGAAACCACTGCAGTTATTAGAAGTGAA...AAGTGTACATGAAGAATGTAGCCCTCTCCAAATCAAGGATCTTTTGGACCTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR GCA 90 bp ACTGTACCCCACTTTGATGACTTTATGTACACAGAACAGCAGCACACTAAACATACCCTTTTCATGAAATaGTGTGATCAGCCAAAGATC +
Preference number: 4 (lower is better)
Translates to: TVPHFDDFMYTEQQHTKHTLFMK*CDQPKI
Trigger: GATCTTTGGCTGATCACAGCATTTCATGAAAAGGGT...ATGTTTAGTGTGCTGCTGTTCTGTGTACATAAAGTCATCAAAGTGGGGTACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR GCA 90 bp GATGACTTTATGTACACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCAACCCTTTTCATGAAATaGTGTGATCAGCCAAAGATC +
Preference number: 4 (lower is better)
Translates to: DDFMYTEQQHTKHSQAVSTLFMK*CDQPKI
Trigger: GATCTTTGGCTGATCACAGCATTTCATGAAAAGGGT...TGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGTGTACATAAAGTCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR GCA 90 bp ACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATTGCACAACAACTTCCTaGATGTCTTCAAGAGATGGA +
Preference number: 4 (lower is better)
Translates to: TEQQHTKHSQAVSYWHYNCTTTS*MSSRDG
Trigger: TCCATCTCTTGAAGACATGCAGGAAGTTGTTGTGCA...ATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR GCA 90 bp CTGATGTCAGTTTTCAAACACTCCATTAGCCAGGTCCAAAAGATCCTTGATTTGAAGCACTTTAGCACCTaGCTACCATCAATTCCATTT +
Preference number: 4 (lower is better)
Translates to: LMSVFKHSISQVQKILDLKHFST*LPSIPF
Trigger: AAATGGAATTGATGGTAGGCAGGTGCTAAAGTGCTT...CAAATCAAGGATCTTTTGGACCTGGCTAATGGAGTGTTTGAAAACTGACATCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR CCA 90 bp AGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATAGTCATTCATGTCTTCAAGAGATaGATGCTGGCCAATTTCCTC +
Preference number: 4 (lower is better)
Translates to: SSTLNIHKLCHIGITIVIHVFKR*MLANFL
Trigger: GAGGAAATTGGCCAGCATCCATCTCTTGAAGACATG...AATGACTATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CCA 90 bp GAACAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATAGTCCCAACATTCTTCAATaGTTTCACAGAGCATTGCCA +
Preference number: 4 (lower is better)
Translates to: EQQHTKHSQAVSYWHYNSPNILQ*FHRALP
Trigger: TGGCAATGCTCTGTGAAACCATTGAAGAATGTTGGG...ACTATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CCA 90 bp CAAGTTGATCATAAAGCATTCCTTACGCGGAGATCTGGGCAAGGTAAAGAGTATAAAAGATCCTTGATTTaGAGAGGGCTACATTCTTCA +
Preference number: 4 (lower is better)
Translates to: QVDHKAFLTRRSGQGKEYKRSLI*RGLHSS
Trigger: TGAAGAATGTAGCCCTCTCCAAATCAAGGATCTTTT...ATACTCTTTACCTTGCCCAGATCTCCGCGTAAGGAATGCTTTATGATCAACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
3UTR CAA 72 bp AAACACTCCATTAGCCAGGTCCAAAAGATCCTTGATTaGGAGAGGGCTACATTCTTCATGTACACTTTTTCA +
Preference number: 4 (lower is better)
Translates to: KHSISQVQKILD*ERATFFMYTFS
Trigger: TGAAAAAGTGTACATGAAGAATGTAGCCCTCTCCAAATCAAGGATCTTTTGGACCTGGCTAATGGAGTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
3UTR CAA 72 bp TTTTATAATTTAGCAACCGTGGAACTGAGGTATACCTaGTTGAGGGAGGTTAAAGTAATGCTTGGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: FYNLATVELRYT*LREVKVMLGSL
Trigger: GAGGCTTCCAAGCATTACTTTAACCTCCCTCAACAAGGTATACCTCAGTTCCACGGTTGCTAAATTATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR TCA 90 bp GAACAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATAGTACCAAGTATAGCACCTaGAGAACAGGAGATAAGAAA +
Preference number: 4 (lower is better)
Translates to: EQQHTKHSQAVSYWHYNSTKYST*RTGDKK
Trigger: TTTCTTATCTCCTGTTCTTCAGGTGCTATACTTGGT...ACTATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000404590.1
CDS-3UTR TCA 90 bp ACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATACCAAGTATAGCACCTaGAGAACAGGAGATAAGAAA +
Preference number: 4 (lower is better)
Translates to: TEQQHTKHSQAVSYWHYNTKYST*RTGDKK
Trigger: TTTCTTATCTCCTGTTCTTCAGGTGCTATACTTGGT...ATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000404590.1
CDS-3UTR TCA 90 bp AGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATAGTCATTCCCAAAATGCACAAATaGCAATCCCCGCAATTAACA +
Preference number: 4 (lower is better)
Translates to: SSTLNIHKLCHIGITIVIPKMHK*QSPQLT
Trigger: TGTTAATTGCGGGGATTGTCATTTGTGCATTTTGGG...AATGACTATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR TCA 90 bp GAACAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATAGTGTATTCATTTTGCCATaGCTGTTTGTCCTGTATTGG +
Preference number: 4 (lower is better)
Translates to: EQQHTKHSQAVSYWHYNSVFILP*LFVLYW
Trigger: CCAATACAGGACAAACAGTCATGGCAAAATGAATAC...ACTATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR TCA 90 bp CAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATAGTCATGTATTCATTTTGCCATaGCTGTTTGTCCTGTATTGG +
Preference number: 4 (lower is better)
Translates to: QQHTKHSQAVSYWHYNSHVFILP*LFVLYW
Trigger: CCAATACAGGACAAACAGTCATGGCAAAATGAATAC...ATGACTATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR TCA 90 bp ATGACTTTATGTACACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCATGTATTCATTTTGCCATaGCTGTTTGTCCTGTATTGG +
Preference number: 4 (lower is better)
Translates to: MTLCTQNSSTLNIHKLCHVFILP*LFVLYW
Trigger: CCAATACAGGACAAACAGTCATGGCAAAATGAATAC...ATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGTGTACATAAAGTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR TCA 90 bp CAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATAGTCATTTTCATGAAATGCTGTaGTCAGCCAAAGATCCACAT +
Preference number: 4 (lower is better)
Translates to: QQHTKHSQAVSYWHYNSHFHEML*SAKDPH
Trigger: ATGTGGATCTTTGGCTGATCACAGCATTTCATGAAA...ATGACTATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR TCA 90 bp AGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATAGTCATTAGTGAACCCTTTTCATaGAATGCTGTGATCAGCCAA +
Preference number: 4 (lower is better)
Translates to: SSTLNIHKLCHIGITIVISEPFS*NAVISQ
Trigger: TTGGCTGATCACAGCATTTCATGAAAAGGGTTCACT...AATGACTATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR TCA 90 bp CAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATAGTCATATGGTTTCTGCAATATaGCACAGTTCATTCCAAGAG +
Preference number: 4 (lower is better)
Translates to: QQHTKHSQAVSYWHYNSHMVSAI*HSSFQE
Trigger: CTCTTGGAATGAACTGTGTCATATTGCAGAAACCAT...ATGACTATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR TCA 90 bp ACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATGCACATTTTTACTTTTaGTGTCCCTGTGAGATATGG +
Preference number: 4 (lower is better)
Translates to: TEQQHTKHSQAVSYWHYNAHFYF*CPCEIW
Trigger: CCATATCTCACAGGGACATCAAAAGTAAAAATGTGC...ATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR TCA 90 bp ATGACTTTATGTACACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCATGCACATTTTTACTTTTaGTGTCCCTGTGAGATATGG +
Preference number: 4 (lower is better)
Translates to: MTLCTQNSSTLNIHKLCHAHFYF*CPCEIW
Trigger: CCATATCTCACAGGGACATCAAAAGTAAAAATGTGC...ATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGTGTACATAAAGTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR TCA 90 bp AGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATAGTCATTCATTTGTCACCATTGTaGCCACTGTTACAATGTCCT +
Preference number: 4 (lower is better)
Translates to: SSTLNIHKLCHIGITIVIHLSPL*PLLQCP
Trigger: AGGACATTGTAACAGTGGTCACAATGGTGACAAATG...AATGACTATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR TCA 90 bp ATGACTTTATGTACACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCATACCAGATCAAGAAATTaGGAGACCAAGTACTTTGTG +
Preference number: 4 (lower is better)
Translates to: MTLCTQNSSTLNIHKLCHTRSRN*ETKYFV
Trigger: CACAAAGTACTTGGTCTCTCAATTTCTTGATCTGGT...ATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGTGTACATAAAGTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR GCA 90 bp AAGTTGATCATAAAGCATTCCTTACGCGGAGATCTGGGCAAGGTAAAGAGTATATGTAATATGTTCTCATaGTTCATTCCAGGCAAACTG +
Preference number: 4 (lower is better)
Translates to: KLIIKHSLRGDLGKVKSICNMFS*FIPGKL
Trigger: CAGTTTGCCTGGAATGAAGCATGAGAACATATTACA...TATACTCTTTACCTTGCCCAGATCTCCGCGTAAGGAATGCTTTATGATCAACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR GCA 90 bp CCCACTTTGATGACTTTATGTACACAGAACAGCAGCACACTAAACATTCACAAGTCTAGCCATGGTTTCTaGAATATGACACAGTTCATT +
Preference number: 4 (lower is better)
Translates to: PTLMTLCTQNSSTLNIHKSSHGF*NMTQFI
Trigger: AATGAACTGTGTCATATTGCAGAAACCATGGCTAGA...CTTGTGAATGTTTAGTGTGCTGCTGTTCTGTGTACATAAAGTCATCAAAGTGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR GCA 90 bp CTGATGTCAGTTTTCAAACACTCCATTAGCCAGGTCCAAAAGATCCTTGATTTGTCTAGCCATGGTTTCTaGAATATGACACAGTTCATT +
Preference number: 4 (lower is better)
Translates to: LMSVFKHSISQVQKILDLSSHGF*NMTQFI
Trigger: AATGAACTGTGTCATATTGCAGAAACCATGGCTAGA...CAAATCAAGGATCTTTTGGACCTGGCTAATGGAGTGTTTGAAAACTGACATCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR GCA 90 bp AGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATAGTCATTTGCACAACAACTTCCTaGATGTCTTCAAGAGATGGA +
Preference number: 4 (lower is better)
Translates to: SSTLNIHKLCHIGITIVICTTTS*MSSRDG
Trigger: TCCATCTCTTGAAGACATGCAGGAAGTTGTTGTGCA...AATGACTATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR GCA 90 bp ACTGTACCCCACTTTGATGACTTTATGTACACAGAACAGCAGCACACTAAACATGAAATGCTAAAACACTaGTTTACGAATGGCCACTTA +
Preference number: 4 (lower is better)
Translates to: TVPHFDDFMYTEQQHTKHEMLKH*FTNGHL
Trigger: TAAGTGGCCATTCGTAAAGCAGTGTTTTAGCATTTC...ATGTTTAGTGTGCTGCTGTTCTGTGTACATAAAGTCATCAAAGTGGGGTACAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR CCA 90 bp GAACAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATAGTGATGTTGTAATAGGGTaGCTTAGGTGTAACTGGATT +
Preference number: 4 (lower is better)
Translates to: EQQHTKHSQAVSYWHYNSDVVIG*LRCNWI
Trigger: AATCCAGTTACACCTAAGCCACCCTATTACAACATC...ACTATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CCA 90 bp CTGATGTCAGTTTTCAAACACTCCATTAGCCAGGTCCAAAAGATCCTTGATTTGCTGTTTGTCCTGTATTaGAAATATTTTGACAGCCAC +
Preference number: 4 (lower is better)
Translates to: LMSVFKHSISQVQKILDLLFVLY*KYFDSH
Trigger: GTGGCTGTCAAAATATTTCCAATACAGGACAAACAG...CAAATCAAGGATCTTTTGGACCTGGCTAATGGAGTGTTTGAAAACTGACATCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CCA 90 bp CCCACTTTGATGACTTTATGTACACAGAACAGCAGCACACTAAACATTCACAAGCTGTTTGTCCTGTATTaGAAATATTTTGACAGCCAC +
Preference number: 4 (lower is better)
Translates to: PTLMTLCTQNSSTLNIHKLFVLY*KYFDSH
Trigger: GTGGCTGTCAAAATATTTCCAATACAGGACAAACAG...CTTGTGAATGTTTAGTGTGCTGCTGTTCTGTGTACATAAAGTCATCAAAGTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CCA 90 bp TGTACACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTAAAAATGCATCCCTTTaGAAGTTTATAGCACCCTCT +
Preference number: 4 (lower is better)
Translates to: CTQNSSTLNIHKLCHIGIKNASL*KFIAPS
Trigger: AGAGGGTGCTATAAACTTCCAAAGGGATGCATTTTT...AATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGTGTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CCA 90 bp CTGATGTCAGTTTTCAAACACTCCATTAGCCAGGTCCAAAAGATCCTTGATTTGAAAAATGCATCCCTTTaGAAGTTTATAGCACCCTCT +
Preference number: 4 (lower is better)
Translates to: LMSVFKHSISQVQKILDLKNASL*KFIAPS
Trigger: AGAGGGTGCTATAAACTTCCAAAGGGATGCATTTTT...CAAATCAAGGATCTTTTGGACCTGGCTAATGGAGTGTTTGAAAACTGACATCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CCA 90 bp GAACAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATAGTGTTAGTCTCTGCATCTaGGTAATTCTTTCACCTACA +
Preference number: 4 (lower is better)
Translates to: EQQHTKHSQAVSYWHYNSVSLCI*VILSPT
Trigger: TGTAGGTGAAAGAATTACCCAGATGCAGAGACTAAC...ACTATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CCA 90 bp CCCACTTTGATGACTTTATGTACACAGAACAGCAGCACACTAAACATTCACAAGAAAAGATCCTTGATTTaGAGAGGGCTACATTCTTCA +
Preference number: 4 (lower is better)
Translates to: PTLMTLCTQNSSTLNIHKKRSLI*RGLHSS
Trigger: TGAAGAATGTAGCCCTCTCCAAATCAAGGATCTTTT...CTTGTGAATGTTTAGTGTGCTGCTGTTCTGTGTACATAAAGTCATCAAAGTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR TCA 90 bp ATGACTTTATGTACACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCATGGAATTAGTGTCTTCTaGCAGACATTAAGAAATCTG +
Preference number: 4 (lower is better)
Translates to: MTLCTQNSSTLNIHKLCHGISVF*QTLRNL
Trigger: CAGATTTCTTAATGTCTGTCAGAAGACACTAATTCC...ATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGTGTACATAAAGTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR TCA 90 bp ATGACTTTATGTACACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCATCCACACACTGTTTGGTaGAAAGAAATACACTACAAT +
Preference number: 4 (lower is better)
Translates to: MTLCTQNSSTLNIHKLCHPHTVW*KEIHYN
Trigger: ATTGTAGTGTATTTCTTTTCACCAAACAGTGTGTGG...ATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGTGTACATAAAGTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR TCA 90 bp CAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATAGTCATAGACCAAGTACTTTGTaGAATAAAGAGGTGAACTCA +
Preference number: 4 (lower is better)
Translates to: QQHTKHSQAVSYWHYNSHRPSTL*NKEVNS
Trigger: TGAGTTCACCTCTTTATTTCACAAAGTACTTGGTCT...ATGACTATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR TCA 90 bp GAACAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATAGTAAACGTACTGCTGGTTaGATATCTGAGGTAAATGAT +
Preference number: 4 (lower is better)
Translates to: EQQHTKHSQAVSYWHYNSKRTAG*ISEVND
Trigger: ATCATTTACCTCAGATATTCAACCAGCAGTACGTTT...ACTATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR TCA 90 bp CAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATAGTCATTGCTTACCAATATTCTaGGAGGTAACAAATGGGATA +
Preference number: 4 (lower is better)
Translates to: QQHTKHSQAVSYWHYNSHCLPIF*EVTNGI
Trigger: TATCCCATTTGTTACCTCTCAGAATATTGGTAAGCA...ATGACTATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR GCA 90 bp CAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATAGTCATTGTAATATGTTCTCATaGTTCATTCCAGGCAAACTG +
Preference number: 4 (lower is better)
Translates to: QQHTKHSQAVSYWHYNSHCNMFS*FIPGKL
Trigger: CAGTTTGCCTGGAATGAAGCATGAGAACATATTACA...ATGACTATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR GCA 90 bp CAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATAGTCATGAAATGCTAAAACACTaGTTTACGAATGGCCACTTA +
Preference number: 4 (lower is better)
Translates to: QQHTKHSQAVSYWHYNSHEMLKH*FTNGHL
Trigger: TAAGTGGCCATTCGTAAAGCAGTGTTTTAGCATTTC...ATGACTATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR GCA 90 bp GATGACTTTATGTACACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCAGATGTTCAATCAAGATaGTACTTGTATCATTTTGCC +
Preference number: 4 (lower is better)
Translates to: DDFMYTEQQHTKHSQAVSDVQSR*YLYHFA
Trigger: GGCAAAATGATACAAGTAGCATCTTGATTGAACATC...TGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGTGTACATAAAGTCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR CCA 90 bp ACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATCAACACCAGTTTGATTaGTTCTGTCTTTTTCCCAAT +
Preference number: 4 (lower is better)
Translates to: TEQQHTKHSQAVSYWHYNQHQFD*FCLFPN
Trigger: ATTGGGAAAAAGACAGAACCAATCAAACTGGTGTTG...ATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000404590.1
CDS-3UTR CCA 90 bp CAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATAGTCATCTGTTTGTCCTGTATTaGAAATATTTTGACAGCCAC +
Preference number: 4 (lower is better)
Translates to: QQHTKHSQAVSYWHYNSHLFVLY*KYFDSH
Trigger: GTGGCTGTCAAAATATTTCCAATACAGGACAAACAG...ATGACTATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CCA 90 bp CAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATAGTCATAATCCATCAGTCCTATaGCAAGTTGATCATAAAGCA +
Preference number: 4 (lower is better)
Translates to: QQHTKHSQAVSYWHYNSHNPSVL*QVDHKA
Trigger: TGCTTTATGATCAACTTGCCATAGGACTGATGGATT...ATGACTATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR CCA 90 bp ATGACTTTATGTACACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCATAATAAAGCCGAACACTaGTTAATCCATCAGTCCTAT +
Preference number: 4 (lower is better)
Translates to: MTLCTQNSSTLNIHKLCHNKAEH*LIHQSY
Trigger: ATAGGACTGATGGATTAACCAGTGTTCGGCTTTATT...ATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGTGTACATAAAGTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR GCA 90 bp CAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATAGTCATTTCACTTCTAATAACTaGAGTGGTTTCAAACCTAGT +
Preference number: 4 (lower is better)
Translates to: QQHTKHSQAVSYWHYNSHFTSNN*SGFKPS
Trigger: ACTAGGTTTGAAACCACTGCAGTTATTAGAAGTGAA...ATGACTATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR GCA 90 bp ATGACTTTATGTACACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCATTTCACTTCTAATAACTaGAGTGGTTTCAAACCTAGT +
Preference number: 4 (lower is better)
Translates to: MTLCTQNSSTLNIHKLCHFTSNN*SGFKPS
Trigger: ACTAGGTTTGAAACCACTGCAGTTATTAGAAGTGAA...ATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGTGTACATAAAGTCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR GCA 90 bp ACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATGATGTTCAATCAAGATaGTACTTGTATCATTTTGCC +
Preference number: 4 (lower is better)
Translates to: TEQQHTKHSQAVSYWHYNDVQSR*YLYHFA
Trigger: GGCAAAATGATACAAGTAGCATCTTGATTGAACATC...ATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR CCA 90 bp AGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATAGTCATTCAACACCAGTTTGATTaGTTCTGTCTTTTTCCCAAT +
Preference number: 4 (lower is better)
Translates to: SSTLNIHKLCHIGITIVIQHQFD*FCLFPN
Trigger: ATTGGGAAAAAGACAGAACCAATCAAACTGGTGTTG...AATGACTATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000404590.1
CDS CCA 90 bp AGACACCTAAAGTCCGAGGACCACTGGCGGCCGAGCTCGCGGCGGTaGCGGCGAGGCGGCTGCGGCGCGGGGAAGGGGCGGCGGGCGGCA +
Preference number: 5 (lower is better)
Translates to: RHLKSEDHWRPSSRR*RRGGCGAGKGRRAA
Trigger: TGCCGCCCGCCGCCCCTTCCCCGCGCCGCAGCCGCCTCGCCGCCACCGCCGCGAGCTCGGCCGCCAGTGGTCCTCGGACTTTAGGTGTCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462659.1
ENST00000487959.5
ENST00000535787.5
CDS CCA 90 bp GAGACAAACCTCCTTCAACCCAGACACCTAAAGTCCGAGGACCACTaGCGGCCGAGCTCGCGGCGGTGGCGGCGAGGCGGCTGCGGCGCG +
Preference number: 5 (lower is better)
Translates to: ETNLLQPRHLKSEDH*RPSSRRWRRGGCGA
Trigger: CGCGCCGCAGCCGCCTCGCCGCCACCGCCGCGAGCTCGGCCGCCAGTGGTCCTCGGACTTTAGGTGTCTGGGTTGAAGGAGGTTTGTCTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404590.1
CDS CCA 90 bp GATTGGTTCTGTCTTCAACCCAGACACCTAAAGTCCGAGGACCACTaGCGGCCGAGCTCGCGGCGGTGGCGGCGAGGCGGCTGCGGCGCG +
Preference number: 5 (lower is better)
Translates to: DWFCLQPRHLKSEDH*RPSSRRWRRGGCGA
Trigger: CGCGCCGCAGCCGCCTCGCCGCCACCGCCGCGAGCTCGGCCGCCAGTGGTCCTCGGACTTTAGGTGTCTGGGTTGAAGACAGAACCAATC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487959.5
ENST00000535787.5
CDS CCA 90 bp GCGCCGGGGAATCCGGAGGAAGTTCTCGCTAGATATCCAGTTCCCTaGGTCTTCCTCGGAGACAAACCTCCTGGTGTAAAATCAACCGTC +
Preference number: 5 (lower is better)
Translates to: APGNPEEVLARYPVP*VFLGDKPPGVKSTV
Trigger: GACGGTTGATTTTACACCAGGAGGTTTGTCTCCGAGGAAGACCCAGGGAACTGGATATCTAGCGAGAACTTCCTCCGGATTCCCCGGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000465329.1
CDS CCA 90 bp GCGCCGGGGAATCCGGAGGAAGTTCTCGCTAGATATCCAGTTCCCTaGGTCTTCCTCGGAGACAAACCTCCTTCAACCCAGACACCTAAA +
Preference number: 5 (lower is better)
Translates to: APGNPEEVLARYPVP*VFLGDKPPSTQTPK
Trigger: TTTAGGTGTCTGGGTTGAAGGAGGTTTGTCTCCGAGGAAGACCCAGGGAACTGGATATCTAGCGAGAACTTCCTCCGGATTCCCCGGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404590.1
CDS-3UTR CAA 90 bp CTTAGCAGCTCCAGTTCAGAGTCCCATTTCTTAGTGTGCACAGATGGCGCAACCGGGTGGTCCTGGGTCTaGAGTTGGAACAAGTACAGG +
Preference number: 5 (lower is better)
Translates to: LSSSSSESHFLVCTDGATGWSWV*SWNKYR
Trigger: CCTGTACTTGTTCCAACTCAAGACCCAGGACCACCC...GGTTGCGCCATCTGTGCACACTAAGAAATGGGACTCTGAACTGGAGCTGCTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CAA 90 bp CACTCCATTAGCCAGGTCCAAAAGATCCTTGATTTGGAGAGGGCTACATTCTTCGTCCTGGGTCTTGAGTaGGAACAAGTACAGGAGGGT +
Preference number: 5 (lower is better)
Translates to: HSISQVQKILDLERATFFVLGLE*EQVQEG
Trigger: ACCCTCCTGTACTTGTTCCAACTCAAGACCCAGGAC...GAAGAATGTAGCCCTCTCCAAATCAAGGATCTTTTGGACCTGGCTAATGGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CAA 90 bp GCCAGGTCCAAAAGATCCTTGATTTGGAGAGGGCTACATTCTTCATGTACACTTGGGTGGTCCTGGGTCTaGAGTTGGAACAAGTACAGG +
Preference number: 5 (lower is better)
Translates to: ARSKRSLIWRGLHSSCTLGWSWV*SWNKYR
Trigger: CCTGTACTTGTTCCAACTCAAGACCCAGGACCACCC...AAGTGTACATGAAGAATGTAGCCCTCTCCAAATCAAGGATCTTTTGGACCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CAA 90 bp ACTGTACCCCACTTTGATGACTTTATGTACACAGAACAGCAGCACACTAAACATCGGCAAACGCCAACTTaGCAGCAGCTCCCATTTTCC +
Preference number: 5 (lower is better)
Translates to: TVPHFDDFMYTEQQHTKHRQTPT*QQLPFS
Trigger: GGAAAATGGGAGCTGCTGCAAAGTTGGCGTTTGCCG...ATGTTTAGTGTGCTGCTGTTCTGTGTACATAAAGTCATCAAAGTGGGGTACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000404590.1
CDS-3UTR CAA 90 bp CACTCCATTAGCCAGGTCCAAAAGATCCTTGATTTGGAGAGGGCTACATTCTTCGTATCGCCTGCAGACTaGCCAGCCTCAAATTTTAAG +
Preference number: 5 (lower is better)
Translates to: HSISQVQKILDLERATFFVSPAD*PASNFK
Trigger: CTTAAAATTTGAGGCTGGCAAGTCTGCAGGCGATAC...GAAGAATGTAGCCCTCTCCAAATCAAGGATCTTTTGGACCTGGCTAATGGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS TCA 90 bp ATTCTTTCACCTACACATCCAGCTGATAACCTGGCTTCTGCGTCGTaGTCCCAACATTCTTCAATGGTTTCACAGAGCATTGCCATTCCA +
Preference number: 5 (lower is better)
Translates to: ILSPTHPADNLASAS*SQHSSMVSQSIAIP
Trigger: TGGAATGGCAATGCTCTGTGAAACCATTGAAGAATGTTGGGATCACGACGCAGAAGCCAGGTTATCAGCTGGATGTGTAGGTGAAAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000495775.1
ENST00000535787.5
CDS GCA 90 bp TTCCAGACACAACCAAATCTTCCCCTTGCTTTCACTTCTAATAACTaGAGTGGTTTCAAACCTAGTAATGGAGAAGGTGGGGGTGGTCCT +
Preference number: 5 (lower is better)
Translates to: FQTQPNLPLAFTSNN*SGFKPSNGEGGGGP
Trigger: AGGACCACCCCCACCTTCTCCATTACTAGGTTTGAAACCACTGCAGTTATTAGAAGTGAAAGCAAGGGGAAGATTTGGTTGTGTCTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS CCA 90 bp CAGCTGATAACCTGGCTTCTGCGTCGTGATCCCAACATTCTTCAATaGTTTCACAGAGCATTGCCATTCCAGCATGTTTCTGCCAATAAT +
Preference number: 5 (lower is better)
Translates to: QLITWLLRRDPNILQ*FHRALPFQHVSANN
Trigger: ATTATTGGCAGAAACATGCTGGAATGGCAATGCTCTGTGAAACCATTGAAGAATGTTGGGATCACGACGCAGAAGCCAGGTTATCAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000495775.1
ENST00000535787.5
CDS-3UTR CAA 90 bp GAACAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATAGTCGGCAAACGCCAACTTaGCAGCAGCTCCCATTTTCC +
Preference number: 5 (lower is better)
Translates to: EQQHTKHSQAVSYWHYNSRQTPT*QQLPFS
Trigger: GGAAAATGGGAGCTGCTGCAAAGTTGGCGTTTGCCG...ACTATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000404590.1
CDS-3UTR CAA 90 bp TGTACACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTGTCCTGGGTCTTGAGTaGGAACAAGTACAGGAGGGT +
Preference number: 5 (lower is better)
Translates to: CTQNSSTLNIHKLCHIGIVLGLE*EQVQEG
Trigger: ACCCTCCTGTACTTGTTCCAACTCAAGACCCAGGAC...AATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGTGTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CAA 90 bp CCTTCACATCTGTGCTGTCGGCAATGCAGTAAGTCTCCCAGAGCAACATTTTTCCAAAAATGCATCCCTTaGGAAGTTTATAGCACCCTC +
Preference number: 5 (lower is better)
Translates to: PSHLCCRQCSKSPRATFFQKCIP*EVYSTL
Trigger: GAGGGTGCTATAAACTTCCAAAGGGATGCATTTTTG...GAAAAATGTTGCTCTGGGAGACTTACTGCATTGCCGACAGCACAGATGTGAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CAA 90 bp CCTTCACATCTGTGCTGTCGGCAATGCAGTAAGTCTCCCAGAGCAACATTTTTCCTGAGGTATACCTTGTaGAGGGAGGTTAAAGTAATG +
Preference number: 5 (lower is better)
Translates to: PSHLCCRQCSKSPRATFFLRYTL*REVKVM
Trigger: CATTACTTTAACCTCCCTCAACAAGGTATACCTCAG...GAAAAATGTTGCTCTGGGAGACTTACTGCATTGCCGACAGCACAGATGTGAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CAA 90 bp TGTGCTGTCGGCAATGCAGTAAGTCTCCCAGAGCAACATTTTTCAACAAAGGGTACGAATGGCCACTTATaGTTGGCACTAAGCATAGCT +
Preference number: 5 (lower is better)
Translates to: CAVGNAVSLPEQHFSTKGTNGHL*LALSIA
Trigger: AGCTATGCTTAGTGCCAACAATAAGTGGCCATTCGT...ACCCTTTGTTGAAAAATGTTGCTCTGGGAGACTTACTGCATTGCCGACAGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR CAA 90 bp CTTAGCAGCTCCAGTTCAGAGTCCCATTTCTTAGTGTGCACAGATGGCGCAACCAACCAGATCAAGAAATaGAGAGACCAAGTACTTTGT +
Preference number: 5 (lower is better)
Translates to: LSSSSSESHFLVCTDGATNQIKK*RDQVLC
Trigger: ACAAAGTACTTGGTCTCTCAATTTCTTGATCTGGTT...GGTTGCGCCATCTGTGCACACTAAGAAATGGGACTCTGAACTGGAGCTGCTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS CCA 90 bp CTGCAGCAGTACAGCGAGAAGCCAGTTCCCATAGGACTAATCCCATaGCATACATATCTATCCTCAAAAATGCATCCCTTTGGAAGTTTA +
Preference number: 5 (lower is better)
Translates to: LQQYSEKPVPIGLIP*HTYLSSKMHPFGSL
Trigger: TAAACTTCCAAAGGGATGCATTTTTGAGGATAGATATGTATGCCATGGGATTAGTCCTATGGGAACTGGCTTCTCGCTGTACTGCTGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CAA 90 bp CCTTCACATCTGTGCTGTCGGCAATGCAGTAAGTCTCCCAGAGCAACATTTTTCATCCAGCCAACAACCTaGTTTCACTATTTCAATGGA +
Preference number: 5 (lower is better)
Translates to: PSHLCCRQCSKSPRATFFIQPTT*FHYFNG
Trigger: TCCATTGAAATAGTGAAACAAGGTTGTTGGCTGGAT...GAAAAATGTTGCTCTGGGAGACTTACTGCATTGCCGACAGCACAGATGTGAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CAA 90 bp ACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATGTCCTGGGTCTTGAGTaGGAACAAGTACAGGAGGGT +
Preference number: 5 (lower is better)
Translates to: TEQQHTKHSQAVSYWHYNVLGLE*EQVQEG
Trigger: ACCCTCCTGTACTTGTTCCAACTCAAGACCCAGGAC...ATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CAA 90 bp GCCAGGTCCAAAAGATCCTTGATTTGGAGAGGGCTACATTCTTCATGTACACTTTGGTTTCACAGAGCATaGCCATTCCAGCATGTTTCT +
Preference number: 5 (lower is better)
Translates to: ARSKRSLIWRGLHSSCTLWFHRA*PFQHVS
Trigger: AGAAACATGCTGGAATGGCAATGCTCTGTGAAACCA...AAGTGTACATGAAGAATGTAGCCCTCTCCAAATCAAGGATCTTTTGGACCTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CAA 90 bp CACTCCATTAGCCAGGTCCAAAAGATCCTTGATTTGGAGAGGGCTACATTCTTCCAAAAGATCCTTGATTaGGAGAGGGCTACATTCTTC +
Preference number: 5 (lower is better)
Translates to: HSISQVQKILDLERATFFQKILD*ERATFF
Trigger: GAAGAATGTAGCCCTCTCCAAATCAAGGATCTTTTG...GAAGAATGTAGCCCTCTCCAAATCAAGGATCTTTTGGACCTGGCTAATGGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CAA 90 bp TGTGCTGTCGGCAATGCAGTAAGTCTCCCAGAGCAACATTTTTCAACAAAGGGTCTGAGGTATACCTTGTaGAGGGAGGTTAAAGTAATG +
Preference number: 5 (lower is better)
Translates to: CAVGNAVSLPEQHFSTKGLRYTL*REVKVM
Trigger: CATTACTTTAACCTCCCTCAACAAGGTATACCTCAG...ACCCTTTGTTGAAAAATGTTGCTCTGGGAGACTTACTGCATTGCCGACAGCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CAA 90 bp TGTGCTGTCGGCAATGCAGTAAGTCTCCCAGAGCAACATTTTTCAACAAAGGGTGAGGTGAACTCAACATaGAAAAGGGAATTGCTAGGA +
Preference number: 5 (lower is better)
Translates to: CAVGNAVSLPEQHFSTKGEVNST*KRELLG
Trigger: TCCTAGCAATTCCCTTTTCAATGTTGAGTTCACCTC...ACCCTTTGTTGAAAAATGTTGCTCTGGGAGACTTACTGCATTGCCGACAGCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS TCA 90 bp GCCAAAGATCCACATCAACACTGGTGCCTCGTTTTTCTGCACCAATaGACTGTAATATGTTCTCATGCTTCATTCCAGGCAAACTGTAGA +
Preference number: 5 (lower is better)
Translates to: AKDPHQHWCLVFLHQ*TVICSHASFQANCR
Trigger: TCTACAGTTTGCCTGGAATGAAGCATGAGAACATATTACAGTTCATTGGTGCAGAAAAACGAGGCACCAGTGTTGATGTGGATCTTTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CAA 90 bp ACTGTACCCCACTTTGATGACTTTATGTACACAGAACAGCAGCACACTAAACATGTATCGCCTGCAGACTaGCCAGCCTCAAATTTTAAG +
Preference number: 5 (lower is better)
Translates to: TVPHFDDFMYTEQQHTKHVSPAD*PASNFK
Trigger: CTTAAAATTTGAGGCTGGCAAGTCTGCAGGCGATAC...ATGTTTAGTGTGCTGCTGTTCTGTGTACATAAAGTCATCAAAGTGGGGTACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CAA 90 bp CACTCCATTAGCCAGGTCCAAAAGATCCTTGATTTGGAGAGGGCTACATTCTTCTTACTGTACCCCACTTaGATGACTTTATGTACACAG +
Preference number: 5 (lower is better)
Translates to: HSISQVQKILDLERATFFLLYPT*MTLCTQ
Trigger: CTGTGTACATAAAGTCATCAAAGTGGGGTACAGTAA...GAAGAATGTAGCCCTCTCCAAATCAAGGATCTTTTGGACCTGGCTAATGGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CAA 90 bp ATGACTTTATGTACACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCATGTATCGCCTGCAGACTaGCCAGCCTCAAATTTTAAG +
Preference number: 5 (lower is better)
Translates to: MTLCTQNSSTLNIHKLCHVSPAD*PASNFK
Trigger: CTTAAAATTTGAGGCTGGCAAGTCTGCAGGCGATAC...ATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGTGTACATAAAGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CAA 90 bp CAAGTTGATCATAAAGCATTCCTTACGCGGAGATCTGGGCAAGGTAAAGAGTATCAAAAATGCATCCCTTaGGAAGTTTATAGCACCCTC +
Preference number: 5 (lower is better)
Translates to: QVDHKAFLTRRSGQGKEYQKCIP*EVYSTL
Trigger: GAGGGTGCTATAAACTTCCAAAGGGATGCATTTTTG...ATACTCTTTACCTTGCCCAGATCTCCGCGTAAGGAATGCTTTATGATCAACTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR CAA 90 bp ACTGTACCCCACTTTGATGACTTTATGTACACAGAACAGCAGCACACTAAACATTGGTTTCACAGAGCATaGCCATTCCAGCATGTTTCT +
Preference number: 5 (lower is better)
Translates to: TVPHFDDFMYTEQQHTKHWFHRA*PFQHVS
Trigger: AGAAACATGCTGGAATGGCAATGCTCTGTGAAACCA...ATGTTTAGTGTGCTGCTGTTCTGTGTACATAAAGTCATCAAAGTGGGGTACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CAA 90 bp TGTACACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACGAATGGCCACTTATaGTTGGCACTAAGCATAGCT +
Preference number: 5 (lower is better)
Translates to: CTQNSSTLNIHKLCHIGITNGHL*LALSIA
Trigger: AGCTATGCTTAGTGCCAACAATAAGTGGCCATTCGT...AATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGTGTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR CAA 90 bp TGTGCTGTCGGCAATGCAGTAAGTCTCCCAGAGCAACATTTTTCAACAAAGGGTAACCAGATCAAGAAATaGAGAGACCAAGTACTTTGT +
Preference number: 5 (lower is better)
Translates to: CAVGNAVSLPEQHFSTKGNQIKK*RDQVLC
Trigger: ACAAAGTACTTGGTCTCTCAATTTCTTGATCTGGTT...ACCCTTTGTTGAAAAATGTTGCTCTGGGAGACTTACTGCATTGCCGACAGCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR CAA 90 bp CTGATGTCAGTTTTCAAACACTCCATTAGCCAGGTCCAAAAGATCCTTGATTTGCGGTTCAACACCAGTTaGATTGGTTCTGTCTTCAAC +
Preference number: 5 (lower is better)
Translates to: LMSVFKHSISQVQKILDLRFNTS*IGSVFN
Trigger: GTTGAAGACAGAACCAATCAAACTGGTGTTGAACCG...CAAATCAAGGATCTTTTGGACCTGGCTAATGGAGTGTTTGAAAACTGACATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535787.5
CDS-3UTR CAA 90 bp AAGTTGATCATAAAGCATTCCTTACGCGGAGATCTGGGCAAGGTAAAGAGTATACAAAAATGCATCCCTTaGGAAGTTTATAGCACCCTC +
Preference number: 5 (lower is better)
Translates to: KLIIKHSLRGDLGKVKSIQKCIP*EVYSTL
Trigger: GAGGGTGCTATAAACTTCCAAAGGGATGCATTTTTG...TATACTCTTTACCTTGCCCAGATCTCCGCGTAAGGAATGCTTTATGATCAACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR CAA 90 bp CAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATAGTCATTGGTTTCACAGAGCATaGCCATTCCAGCATGTTTCT +
Preference number: 5 (lower is better)
Translates to: QQHTKHSQAVSYWHYNSHWFHRA*PFQHVS
Trigger: AGAAACATGCTGGAATGGCAATGCTCTGTGAAACCA...ATGACTATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CAA 90 bp GCCAGGTCCAAAAGATCCTTGATTTGGAGAGGGCTACATTCTTCATGTACACTTCATAGACTAGATTCTTaGGGAGGAAAGTCAACATTT +
Preference number: 5 (lower is better)
Translates to: ARSKRSLIWRGLHSSCTLHRLDS*GGKSTF
Trigger: AAATGTTGACTTTCCTCCCAAAGAATCTAGTCTATG...AAGTGTACATGAAGAATGTAGCCCTCTCCAAATCAAGGATCTTTTGGACCTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CAA 90 bp CCCACTTTGATGACTTTATGTACACAGAACAGCAGCACACTAAACATTCACAAGCAAAAGATCCTTGATTaGGAGAGGGCTACATTCTTC +
Preference number: 5 (lower is better)
Translates to: PTLMTLCTQNSSTLNIHKQKILD*ERATFF
Trigger: GAAGAATGTAGCCCTCTCCAAATCAAGGATCTTTTG...CTTGTGAATGTTTAGTGTGCTGCTGTTCTGTGTACATAAAGTCATCAAAGTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CAA 90 bp TGTACACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTCTGAGGTATACCTTGTaGAGGGAGGTTAAAGTAATG +
Preference number: 5 (lower is better)
Translates to: CTQNSSTLNIHKLCHIGILRYTL*REVKVM
Trigger: CATTACTTTAACCTCCCTCAACAAGGTATACCTCAG...AATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGTGTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CAA 90 bp AAGTTGATCATAAAGCATTCCTTACGCGGAGATCTGGGCAAGGTAAAGAGTATAGAACTGAGGTATACCTaGTTGAGGGAGGTTAAAGTA +
Preference number: 5 (lower is better)
Translates to: KLIIKHSLRGDLGKVKSIELRYT*LREVKV
Trigger: TACTTTAACCTCCCTCAACAAGGTATACCTCAGTTC...TATACTCTTTACCTTGCCCAGATCTCCGCGTAAGGAATGCTTTATGATCAACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR CAA 90 bp TGTACACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTGAACTGAGGTATACCTaGTTGAGGGAGGTTAAAGTA +
Preference number: 5 (lower is better)
Translates to: CTQNSSTLNIHKLCHIGIELRYT*LREVKV
Trigger: TACTTTAACCTCCCTCAACAAGGTATACCTCAGTTC...AATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGTGTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS TCA 90 bp TCCTCATGTAAATATGCCAATCCTCTAGCCATGGTTTCTGCAATATaGCACAGTTCATTCCAAGAGACCACATTAGCCTTAAGAAAGTCT +
Preference number: 5 (lower is better)
Translates to: SSCKYANPLAMVSAI*HSSFQETTLALRKS
Trigger: AGACTTTCTTAAGGCTAATGTGGTCTCTTGGAATGAACTGTGTCATATTGCAGAAACCATGGCTAGAGGATTGGCATATTTACATGAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS TCA 90 bp TTGGTTCTGTCTTTTTCCCAATTAGCATTAAAGAAAAGACACTCCTaGGTTTCTGATCTACCAAGTATAGCACCTTCAACCCAGACACCT +
Preference number: 5 (lower is better)
Translates to: LVLSFSQLALKKRHS*VSDLPSIAPSTQTP
Trigger: AGGTGTCTGGGTTGAAGGTGCTATACTTGGTAGATCAGAAACTCAGGAGTGTCTTTTCTTTAATGCTAATTGGGAAAAAGACAGAACCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462659.1
CDS GCA 90 bp ACCACTGTTACAATGTCCTCTGTGGTAATAATATTTGTTAGTCTCTaGATCTGGGTAATTCTTTCACCTACACATCCAGCTGATAACCTG +
Preference number: 5 (lower is better)
Translates to: TTVTMSSVVIIFVSL*IWVILSPTHPADNL
Trigger: CAGGTTATCAGCTGGATGTGTAGGTGAAAGAATTACCCAGATGCAGAGACTAACAAATATTATTACCACAGAGGACATTGTAACAGTGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000495775.1
ENST00000535787.5
CDS-3UTR CAA 90 bp CTGATGTCAGTTTTCAAACACTCCATTAGCCAGGTCCAAAAGATCCTTGATTTGATCCAGCCAACAACCTaGTTTCACTATTTCAATGGA +
Preference number: 5 (lower is better)
Translates to: LMSVFKHSISQVQKILDLIQPTT*FHYFNG
Trigger: TCCATTGAAATAGTGAAACAAGGTTGTTGGCTGGAT...CAAATCAAGGATCTTTTGGACCTGGCTAATGGAGTGTTTGAAAACTGACATCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CAA 90 bp ACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATCAAAAGATCCTTGATTaGGAGAGGGCTACATTCTTC +
Preference number: 5 (lower is better)
Translates to: TEQQHTKHSQAVSYWHYNQKILD*ERATFF
Trigger: GAAGAATGTAGCCCTCTCCAAATCAAGGATCTTTTG...ATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CAA 90 bp TGTACACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTTTACTGTACCCCACTTaGATGACTTTATGTACACAG +
Preference number: 5 (lower is better)
Translates to: CTQNSSTLNIHKLCHIGILLYPT*MTLCTQ
Trigger: CTGTGTACATAAAGTCATCAAAGTGGGGTACAGTAA...AATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGTGTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CAA 90 bp CAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATAGTCATGAACTGAGGTATACCTaGTTGAGGGAGGTTAAAGTA +
Preference number: 5 (lower is better)
Translates to: QQHTKHSQAVSYWHYNSHELRYT*LREVKV
Trigger: TACTTTAACCTCCCTCAACAAGGTATACCTCAGTTC...ATGACTATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CAA 90 bp CAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATAGTCATGAGGTGAACTCAACATaGAAAAGGGAATTGCTAGGA +
Preference number: 5 (lower is better)
Translates to: QQHTKHSQAVSYWHYNSHEVNST*KRELLG
Trigger: TCCTAGCAATTCCCTTTTCAATGTTGAGTTCACCTC...ATGACTATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR CAA 90 bp CTGATGTCAGTTTTCAAACACTCCATTAGCCAGGTCCAAAAGATCCTTGATTTGCAGTCCTATGGCAAGTaGATCATAAAGCATTCCTTA +
Preference number: 5 (lower is better)
Translates to: LMSVFKHSISQVQKILDLQSYGK*IIKHSL
Trigger: TAAGGAATGCTTTATGATCAACTTGCCATAGGACTG...CAAATCAAGGATCTTTTGGACCTGGCTAATGGAGTGTTTGAAAACTGACATCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR CAA 90 bp TGTACACAGAACAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTCAGTCCTATGGCAAGTaGATCATAAAGCATTCCTTA +
Preference number: 5 (lower is better)
Translates to: CTQNSSTLNIHKLCHIGIQSYGK*IIKHSL
Trigger: TAAGGAATGCTTTATGATCAACTTGCCATAGGACTG...AATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTCTGTGTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000535787.5
CDS-3UTR CAA 90 bp GAACAGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATAGTATCCAGCCAACAACCTaGTTTCACTATTTCAATGGA +
Preference number: 5 (lower is better)
Translates to: EQQHTKHSQAVSYWHYNSIQPTT*FHYFNG
Trigger: TCCATTGAAATAGTGAAACAAGGTTGTTGGCTGGAT...ACTATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCTGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS-3UTR CAA 90 bp CCCACTTTGATGACTTTATGTACACAGAACAGCAGCACACTAAACATTCACAAGCATAGACTAGATTCTTaGGGAGGAAAGTCAACATTT +
Preference number: 5 (lower is better)
Translates to: PTLMTLCTQNSSTLNIHKHRLDS*GGKSTF
Trigger: AAATGTTGACTTTCCTCCCAAAGAATCTAGTCTATG...CTTGTGAATGTTTAGTGTGCTGCTGTTCTGTGTACATAAAGTCATCAAAGTGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS TCA 90 bp TTGGTTCTGTCTTTTTCCCAATTAGCATTAAAGAAAAGACACTCCTaGGTTTCTGATCTACCAAGTATAGCACCTGAAGAACAGGAGATA +
Preference number: 5 (lower is better)
Translates to: LVLSFSQLALKKRHS*VSDLPSIAPEEQEI
Trigger: TATCTCCTGTTCTTCAGGTGCTATACTTGGTAGATCAGAAACTCAGGAGTGTCTTTTCTTTAATGCTAATTGGGAAAAAGACAGAACCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000465329.1
CDS-3UTR CAA 90 bp AGCAGCACACTAAACATTCACAAGCTGTGTCATATTGGCATTACAATAGTCATTCATAGACTAGATTCTTaGGGAGGAAAGTCAACATTT +
Preference number: 5 (lower is better)
Translates to: SSTLNIHKLCHIGITIVIHRLDS*GGKSTF
Trigger: AAATGTTGACTTTCCTCCCAAAGAATCTAGTCTATG...AATGACTATTGTAATGCCAATATGACACAGCTTGTGAATGTTTAGTGTGCTGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS GCA 90 bp AAACTTTCTAAAATATACTCTGTCACCTATTCCCAACTGTTTACATaGTATGAGGACAGAAGAGAAACAGACTCTCAACTGTACTTATAC +
Preference number: 5 (lower is better)
Translates to: KLSKIYSVTYSQLFT*YEDRRETDSQLYLY
Trigger: GTATAAGTACAGTTGAGAGTCTGTTTCTCTTCTGTCCTCATAGCATGTAAACAGTTGGGAATAGGTGACAGAGTATATTTTAGAAAGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495775.1
CDS CCA 72 bp CTCCTTCAACCCAGACACCTAAAGTCCGAGGACCACTaGCGGCCGAGCTCGCGGCGGTGGCGGCGAGGCGGC +
Preference number: 6 (lower is better)
Translates to: LLQPRHLKSEDH*RPSSRRWRRGG
Trigger: GCCGCCTCGCCGCCACCGCCGCGAGCTCGGCCGCCAGTGGTCCTCGGACTTTAGGTGTCTGGGTTGAAGGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404590.1
CDS CCA 72 bp CACCTTCAACCCAGACACCTAAAGTCCGAGGACCACTaGCGGCCGAGCTCGCGGCGGTGGCGGCGAGGCGGC +
Preference number: 6 (lower is better)
Translates to: HLQPRHLKSEDH*RPSSRRWRRGG
Trigger: GCCGCCTCGCCGCCACCGCCGCGAGCTCGGCCGCCAGTGGTCCTCGGACTTTAGGTGTCTGGGTTGAAGGTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462659.1
CDS CCA 72 bp TGTCTTCAACCCAGACACCTAAAGTCCGAGGACCACTaGCGGCCGAGCTCGCGGCGGTGGCGGCGAGGCGGC +
Preference number: 6 (lower is better)
Translates to: CLQPRHLKSEDH*RPSSRRWRRGG
Trigger: GCCGCCTCGCCGCCACCGCCGCGAGCTCGGCCGCCAGTGGTCCTCGGACTTTAGGTGTCTGGGTTGAAGACA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487959.5
ENST00000535787.5
CDS CCA 72 bp AATCCGGAGGAAGTTCTCGCTAGATATCCAGTTCCCTaGGTCTTCCTCGGAGACAAACCTCCTTCAACCCAG +
Preference number: 6 (lower is better)
Translates to: NPEEVLARYPVP*VFLGDKPPSTQ
Trigger: CTGGGTTGAAGGAGGTTTGTCTCCGAGGAAGACCCAGGGAACTGGATATCTAGCGAGAACTTCCTCCGGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404590.1
CDS CAA 72 bp CGGGTACCAACCTGTCCATGGGTATCGCCTGCAGACTaGCCAGCCTCAAATTTTAAGGCCAACCCAAAGTCA +
Preference number: 6 (lower is better)
Translates to: RVPTCPWVSPAD*PASNFKANPKS
Trigger: TGACTTTGGGTTGGCCTTAAAATTTGAGGCTGGCAAGTCTGCAGGCGATACCCATGGACAGGTTGGTACCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS CCA 72 bp AATCCGGAGGAAGTTCTCGCTAGATATCCAGTTCCCTaGGTCTTCCTCGGAGACAAACCTCCTGGTGTAAAA +
Preference number: 6 (lower is better)
Translates to: NPEEVLARYPVP*VFLGDKPPGVK
Trigger: TTTTACACCAGGAGGTTTGTCTCCGAGGAAGACCCAGGGAACTGGATATCTAGCGAGAACTTCCTCCGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000465329.1
CDS TCA 72 bp CCTACACATCCAGCTGATAACCTGGCTTCTGCGTCGTaGTCCCAACATTCTTCAATGGTTTCACAGAGCATT +
Preference number: 6 (lower is better)
Translates to: PTHPADNLASAS*SQHSSMVSQSI
Trigger: AATGCTCTGTGAAACCATTGAAGAATGTTGGGATCACGACGCAGAAGCCAGGTTATCAGCTGGATGTGTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000495775.1
ENST00000535787.5
CDS CCA 72 bp ACCTGGCTTCTGCGTCGTGATCCCAACATTCTTCAATaGTTTCACAGAGCATTGCCATTCCAGCATGTTTCT +
Preference number: 6 (lower is better)
Translates to: TWLLRRDPNILQ*FHRALPFQHVS
Trigger: AGAAACATGCTGGAATGGCAATGCTCTGTGAAACCATTGAAGAATGTTGGGATCACGACGCAGAAGCCAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000495775.1
ENST00000535787.5
CDS CCA 72 bp CTCCAGTTCAGAGTCCCATTTCTTAGTGTGCACAGATaGCGCAACCATCATAGACTAGATTCTTTGGGAGGA +
Preference number: 6 (lower is better)
Translates to: LQFRVPFLSVHR*RNHHRLDSLGG
Trigger: TCCTCCCAAAGAATCTAGTCTATGATGGTTGCGCCATCTGTGCACACTAAGAAATGGGACTCTGAACTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000495775.1
ENST00000535787.5
CDS CCA 72 bp TCCAGTTCCCTGGGTCTTCCTCGGAGACAAACCTCCTaGTGTAAAATCAACCGTCATAAAACATATTCGGAA +
Preference number: 6 (lower is better)
Translates to: SSSLGLPRRQTS*CKINRHKTYSE
Trigger: TTCCGAATATGTTTTATGACGGTTGATTTTACACCAGGAGGTTTGTCTCCGAGGAAGACCCAGGGAACTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241416.12
ENST00000465329.1
CDS TCA 72 bp CCACATCAACACTGGTGCCTCGTTTTTCTGCACCAATaGACTGTAATATGTTCTCATGCTTCATTCCAGGCA +
Preference number: 6 (lower is better)
Translates to: PHQHWCLVFLHQ*TVICSHASFQA
Trigger: TGCCTGGAATGAAGCATGAGAACATATTACAGTTCATTGGTGCAGAAAAACGAGGCACCAGTGTTGATGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS TCA 72 bp GAAAGTCTGATAGTGAACCCTTTTCATGAAATGCTGTaGTCAGCCAAAGATCCACATCAACACTGGTGCCTC +
Preference number: 6 (lower is better)
Translates to: ESLIVNPFHEML*SAKDPHQHWCL
Trigger: GAGGCACCAGTGTTGATGTGGATCTTTGGCTGATCACAGCATTTCATGAAAAGGGTTCACTATCAGACTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS CAA 90 bp TTTCTTAGTGTGCACAGATGGCGCAACCATCATAGACTAGATTCTTaGGGAGGAAAGTCAACATTTGTCACCATTGTGACCACTGTTACA +
Preference number: 6 (lower is better)
Translates to: FLSVHRWRNHHRLDS*GGKSTFVTIVTTVT
Trigger: TGTAACAGTGGTCACAATGGTGACAAATGTTGACTTTCCTCCCAAAGAATCTAGTCTATGATGGTTGCGCCATCTGTGCACACTAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000495775.1
ENST00000535787.5
CDS TCA 72 bp CCAATTAGCATTAAAGAAAAGACACTCCTGAGTTTCTaGTCTACCAAGTATAGCACCTTCAACCCAGACACC +
Preference number: 6 (lower is better)
Translates to: PISIKEKTLLSF*STKYSTFNPDT
Trigger: GGTGTCTGGGTTGAAGGTGCTATACTTGGTAGATCAGAAACTCAGGAGTGTCTTTTCTTTAATGCTAATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462659.1
CDS GCA 72 bp CAGCCTCAAATTTTAAGGCCAACCCAAAGTCAGCAATaGAAGCTGTCAGGTTGTTTTTCAACAGCACATTTT +
Preference number: 6 (lower is better)
Translates to: QPQILRPTQSQQ*KLSGCFSTAHF
Trigger: AAAATGTGCTGTTGAAAAACAACCTGACAGCTTGCATTGCTGACTTTGGGTTGGCCTTAAAATTTGAGGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS CAA 90 bp ACAATCAGTCCTGTCATAGCAGTTGATATCATCCAGCCAACAACCTaGTTTCACTATTTCAATGGAACCAGAAATATTCTTCCAGGTAGC +
Preference number: 6 (lower is better)
Translates to: TISPVIAVDIIQPTT*FHYFNGTRNILPGS
Trigger: GCTACCTGGAAGAATATTTCTGGTTCCATTGAAATAGTGAAACAAGGTTGTTGGCTGGATGATATCAACTGCTATGACAGGACTGATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS CAA 90 bp GTGTTCTTACCTGTCATAGCAGTTGATATCATCCAGCCAACAACCTaGTTTCACTATTTCAATGGAACCAGAAATATTCTTCCAGGTAGC +
Preference number: 6 (lower is better)
Translates to: VFLPVIAVDIIQPTT*FHYFNGTRNILPGS
Trigger: GCTACCTGGAAGAATATTTCTGGTTCCATTGAAATAGTGAAACAAGGTTGTTGGCTGGATGATATCAACTGCTATGACAGGTAAGAACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465329.1
CDS TCA 72 bp AAATATGCCAATCCTCTAGCCATGGTTTCTGCAATATaGCACAGTTCATTCCAAGAGACCACATTAGCCTTA +
Preference number: 6 (lower is better)
Translates to: KYANPLAMVSAI*HSSFQETTLAL
Trigger: TAAGGCTAATGTGGTCTCTTGGAATGAACTGTGTCATATTGCAGAAACCATGGCTAGAGGATTGGCATATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS CAA 90 bp ATGCCGCCGTTTATCTTTGTCACCATAACACGGTTCAACACCAGTTaGATTGGTTCTGTCTTTTTCCCAATTAGCATTAAAGAAAAGACA +
Preference number: 6 (lower is better)
Translates to: MPPFIFVTITRFNTS*IGSVFFPISIKEKT
Trigger: TGTCTTTTCTTTAATGCTAATTGGGAAAAAGACAGAACCAATCAAACTGGTGTTGAACCGTGTTATGGTGACAAAGATAAACGGCGGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000462659.1
ENST00000465329.1
CDS CAA 90 bp TCTTACTATCCTGTCATAGCAGTTGATATCATCCAGCCAACAACCTaGTTTCACTATTTCAATGGAACCAGAAATATTCTTCCAGGTAGC +
Preference number: 6 (lower is better)
Translates to: SYYPVIAVDIIQPTT*FHYFNGTRNILPGS
Trigger: GCTACCTGGAAGAATATTTCTGGTTCCATTGAAATAGTGAAACAAGGTTGTTGGCTGGATGATATCAACTGCTATGACAGGATAGTAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462659.1
CDS CAA 72 bp TTTTGCCATGACTGTTTGTCCTGTATTGGAAATATTTaGACAGCCACATATTCGTTAAGCAACTGGGCTTTC +
Preference number: 6 (lower is better)
Translates to: FCHDCLSCIGNI*TATYSLSNWAF
Trigger: GAAAGCCCAGTTGCTTAACGAATATGTGGCTGTCAAAATATTTCCAATACAGGACAAACAGTCATGGCAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000535787.5
CDS CAA 72 bp CCTGTCATAGCAGTTGATATCATCCAGCCAACAACCTaGTTTCACTATTTCAATGGAACCAGAAATATTCTT +
Preference number: 6 (lower is better)
Translates to: PVIAVDIIQPTT*FHYFNGTRNIL
Trigger: AAGAATATTTCTGGTTCCATTGAAATAGTGAAACAAGGTTGTTGGCTGGATGATATCAACTGCTATGACAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000462659.1
ENST00000465329.1
ENST00000535787.5
CDS CAA 72 bp TTTATCTTTGTCACCATAACACGGTTCAACACCAGTTaGATTGGTTCTGTCTTTTTCCCAATTAGCATTAAA +
Preference number: 6 (lower is better)
Translates to: FIFVTITRFNTS*IGSVFFPISIK
Trigger: TTTAATGCTAATTGGGAAAAAGACAGAACCAATCAAACTGGTGTTGAACCGTGTTATGGTGACAAAGATAAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000241416.12
ENST00000404590.1
ENST00000462659.1
ENST00000465329.1