RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ACVR1B (Homo sapiens)

Ensembl gene IDs: ENSG00000135503

Ensembl transcript IDs: ENST00000257963.9, ENST00000415850.6, ENST00000426655.6, ENST00000536420.5, ENST00000541224.5, ENST00000542485.1, ENST00000563121.1

Found 491 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGCTCTGTCCCTCTTGCGGGCCAGGGCTCCTGGCCACAGAGGGCTaGGCAGAAACGAGAGGTAGGCCTCCATCGTACGCTCAACGCGGC +
Preference number: 1 (lower is better)
Translates to: GLCPSCGPGLLATEG*AETRGRPPSYAQRG
Trigger: GCCGCGTTGAGCGTACGATGGAGGCCTACCTCTCGTTTCTGCCCAGCCCTCTGTGGCCAGGAGCCCTGGCCCGCAAGAGGGACAGAGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
3UTR CCA 90 bp ACCTCGGTTCCTCCGGCCCCTCCCAAGCGCCCCTGTCATGGCTCCTaGCCACGTGCCAGATGCACCGGGTTTCGCGGGACTTCCCACTAC +
Preference number: 1 (lower is better)
Translates to: TSVPPAPPKRPCHGS*PRARCTGFRGTSHY
Trigger: GTAGTGGGAAGTCCCGCGAAACCCGGTGCATCTGGCACGTGGCCAGGAGCCATGACAGGGGCGCTTGGGAGGGGCCGGAGGAACCGAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
3UTR CCA 90 bp TGGCAACACCTCGGTTCCTCCGGCCCCTCCCAAGCGCCCCTGTCATaGCTCCTGGCCACGTGCCAGATGCACCGGGTTTCGCGGGACTTC +
Preference number: 1 (lower is better)
Translates to: WQHLGSSGPSQAPLS*LLATCQMHRVSRDF
Trigger: GAAGTCCCGCGAAACCCGGTGCATCTGGCACGTGGCCAGGAGCCATGACAGGGGCGCTTGGGAGGGGCCGGAGGAACCGAGGTGTTGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
3UTR CCA 90 bp AGCGAGTCTCTCCCGGGCTCTGTCCCTCTTGCGGGCCAGGGCTCCTaGCCACAGAGGGCTGGGCAGAAACGAGAGGTAGGCCTCCATCGT +
Preference number: 1 (lower is better)
Translates to: SESLPGSVPLAGQGS*PQRAGQKREVGLHR
Trigger: ACGATGGAGGCCTACCTCTCGTTTCTGCCCAGCCCTCTGTGGCCAGGAGCCCTGGCCCGCAAGAGGGACAGAGCCCGGGAGAGACTCGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
3UTR GCA 90 bp ACCCAACATGGGAGTGAGCGAGTCTCTCCCGGGCTCTGTCCCTCTTaGGGGCCAGGGCTCCTGGCCACAGAGGGCTGGGCAGAAACGAGA +
Preference number: 1 (lower is better)
Translates to: TQHGSERVSPGLCPS*GPGLLATEGWAETR
Trigger: TCTCGTTTCTGCCCAGCCCTCTGTGGCCAGGAGCCCTGGCCCGCAAGAGGGACAGAGCCCGGGAGAGACTCGCTCACTCCCATGTTGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
3UTR GCA 90 bp GCCCCTCCCAAGCGCCCCTGTCATGGCTCCTGGCCACGTGCCAGATaGACCGGGTTTCGCGGGACTTCCCACTACAACCAGTTCGAGGTG +
Preference number: 1 (lower is better)
Translates to: APPKRPCHGSWPRAR*TGFRGTSHYNQFEV
Trigger: CACCTCGAACTGGTTGTAGTGGGAAGTCCCGCGAAACCCGGTGCATCTGGCACGTGGCCAGGAGCCATGACAGGGGCGCTTGGGAGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
3UTR GCA 90 bp TCCTCCGGCCCCTCCCAAGCGCCCCTGTCATGGCTCCTGGCCACGTaGCAGATGCACCGGGTTTCGCGGGACTTCCCACTACAACCAGTT +
Preference number: 1 (lower is better)
Translates to: SSGPSQAPLSWLLAT*QMHRVSRDFPLQPV
Trigger: AACTGGTTGTAGTGGGAAGTCCCGCGAAACCCGGTGCATCTGGCACGTGGCCAGGAGCCATGACAGGGGCGCTTGGGAGGGGCCGGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
3UTR GCA 90 bp AGGGAGGAGGGGAAAGCGCGGCTCAGAGCTGCCTGTGAGAGGGGCTaGACTTCTGGTTCTTCCGGGCCACCTTGGTGTGCTGTGGGCTGG +
Preference number: 1 (lower is better)
Translates to: REEGKARLRAACERG*TSGSSGPPWCAVGW
Trigger: CCAGCCCACAGCACACCAAGGTGGCCCGGAAGAACCAGAAGTGCAGCCCCTCTCACAGGCAGCTCTGAGCCGCGCTTTCCCCTCCTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
3UTR CCA 90 bp GCTGCCTGTGAGAGGGGCTGCACTTCTGGTTCTTCCGGGCCACCTTaGTGTGCTGTGGGCTGGTCCCCGAAGGAAACCCTCAGGGCAGCT +
Preference number: 1 (lower is better)
Translates to: AACERGCTSGSSGPP*CAVGWSPKETLRAA
Trigger: AGCTGCCCTGAGGGTTTCCTTCGGGGACCAGCCCACAGCACACCAAGGTGGCCCGGAAGAACCAGAAGTGCAGCCCCTCTCACAGGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
3UTR GCA 90 bp GGGCATGGCACGAACCAGGCACAACGGGGGACGCACCTCGGCACATaGACACACGGCTGGACAGACAAAGCGGCAGATTCCGTCTCCACT +
Preference number: 1 (lower is better)
Translates to: GHGTNQAQRGTHLGT*THGWTDKAADSVST
Trigger: AGTGGAGACGGAATCTGCCGCTTTGTCTGTCCAGCCGTGTGTGCATGTGCCGAGGTGCGTCCCCCGTTGTGCCTGGTTCGTGCCATGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
3UTR CCA 90 bp AGAGGGGCTGCACTTCTGGTTCTTCCGGGCCACCTTGGTGTGCTGTaGGCTGGTCCCCGAAGGAAACCCTCAGGGCAGCTTAGCACTGGC +
Preference number: 1 (lower is better)
Translates to: RGAALLVLPGHLGVL*AGPRRKPSGQLSTG
Trigger: GCCAGTGCTAAGCTGCCCTGAGGGTTTCCTTCGGGGACCAGCCCACAGCACACCAAGGTGGCCCGGAAGAACCAGAAGTGCAGCCCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
3UTR CCA 90 bp AACCAGGCACAACGGGGGACGCACCTCGGCACATGCACACACGGCTaGACAGACAAAGCGGCAGATTCCGTCTCCACTGGCAGTCTCCCG +
Preference number: 1 (lower is better)
Translates to: NQAQRGTHLGTCTHG*TDKAADSVSTGSLP
Trigger: CGGGAGACTGCCAGTGGAGACGGAATCTGCCGCTTTGTCTGTCCAGCCGTGTGTGCATGTGCCGAGGTGCGTCCCCCGTTGTGCCTGGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
3UTR CCA 90 bp AGTTGGACTGTGTGTGGGGTAAGGGCAGAAGGGCCAACTGGGGAGTaGGCTAGTGGCTTGGGAGTGGACGTGTGTTGGCAGATCCCAGAG +
Preference number: 1 (lower is better)
Translates to: SWTVCGVRAEGPTGE*ASGLGVDVCWQIPE
Trigger: CTCTGGGATCTGCCAACACACGTCCACTCCCAAGCCACTAGCCCACTCCCCAGTTGGCCCTTCTGCCCTTACCCCACACACAGTCCAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257963.9
3UTR TCA 90 bp GACCTCCAGGGAAGGGCACCAGGGAAACTAGATGCTGCTCACTACTaGAAAGAGGCACCAGCAAGCACGGACAGCATGACGACCACACCC +
Preference number: 1 (lower is better)
Translates to: DLQGRAPGKLDAAHY*KEAPASTDSMTTTP
Trigger: GGGTGTGGTCGTCATGCTGTCCGTGCTTGCTGGTGCCTCTTTTCAGTAGTGAGCAGCATCTAGTTTCCCTGGTGCCCTTCCCTGGAGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
3UTR GCA 90 bp GGGAGGGAGAGACCTCCAGGGAAGGGCACCAGGGAAACTAGATGCTaGTCACTACTGAAAAGAGGCACCAGCAAGCACGGACAGCATGAC +
Preference number: 1 (lower is better)
Translates to: GRERPPGKGTRETRC*SLLKRGTSKHGQHD
Trigger: GTCATGCTGTCCGTGCTTGCTGGTGCCTCTTTTCAGTAGTGAGCAGCATCTAGTTTCCCTGGTGCCCTTCCCTGGAGGTCTCTCCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
3UTR GCA 90 bp TGGGGGAGGGAGAGACCTCCAGGGAAGGGCACCAGGGAAACTAGATaGTGCTCACTACTGAAAAGAGGCACCAGCAAGCACGGACAGCAT +
Preference number: 1 (lower is better)
Translates to: WGRERPPGKGTRETR*CSLLKRGTSKHGQH
Trigger: ATGCTGTCCGTGCTTGCTGGTGCCTCTTTTCAGTAGTGAGCAGCATCTAGTTTCCCTGGTGCCCTTCCCTGGAGGTCTCTCCCTCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
3UTR CCA 90 bp TGGGTGTGGGAGCTTCCCAAAGACCTGCTCCATCTTCCCCAGAGGTaGAAGAGTTGGACTGTGTGTGGGGTAAGGGCAGAAGGGCCAACT +
Preference number: 1 (lower is better)
Translates to: WVWELPKDLLHLPQR*KSWTVCGVRAEGPT
Trigger: AGTTGGCCCTTCTGCCCTTACCCCACACACAGTCCAACTCTTCCACCTCTGGGGAAGATGGAGCAGGTCTTTGGGAAGCTCCCACACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257963.9
3UTR TCA 90 bp ACCGCGTTAGAATATACTGCTTCTGATGTGAAGGAGACCACTGCATaGATCCCGTGCTATGCGCACCGGGGCACTCCCCGCCACGGACTA +
Preference number: 1 (lower is better)
Translates to: TALEYTASDVKETTA*IPCYAHRGTPRHGL
Trigger: TAGTCCGTGGCGGGGAGTGCCCCGGTGCGCATAGCACGGGATTCATGCAGTGGTCTCCTTCACATCAGAAGCAGTATATTCTAACGCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415850.6
3UTR GCA 90 bp AGTGTTAAGAGTGGCAGAGGTGGGTGTGGGAGCTTCCCAAAGACCTaGTCCATCTTCCCCAGAGGTGGAAGAGTTGGACTGTGTGTGGGG +
Preference number: 1 (lower is better)
Translates to: SVKSGRGGCGSFPKT*SIFPRGGRVGLCVG
Trigger: CCCCACACACAGTCCAACTCTTCCACCTCTGGGGAAGATGGAGCAGGTCTTTGGGAAGCTCCCACACCCACCTCTGCCACTCTTAACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257963.9
3UTR CCA 90 bp CTCGATGCTGCTGAGGATGATGCCCTTGGGCTGGCTCATTTCCCATaGCTGACACTAACACCCAAGACTTCCACCAGGATTCCTTCCCTG +
Preference number: 1 (lower is better)
Translates to: LDAAEDDALGLAHFP*LTLTPKTSTRIPSL
Trigger: CAGGGAAGGAATCCTGGTGGAAGTCTTGGGTGTTAGTGTCAGCCATGGGAAATGAGCCAGCCCAAGGGCATCATCCTCAGCAGCATCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257963.9
3UTR CCA 90 bp CAGGGCTCTCCCTCCTCCACAAGCTTTGGCAGAGAACTGCTGGGTTaGAGGCAGAGATGCTCTAAGGCTACATACACAATACACCTCCCC +
Preference number: 1 (lower is better)
Translates to: QGSPSSTSFGRELLG*RQRCSKATYTIHLP
Trigger: GGGGAGGTGTATTGTGTATGTAGCCTTAGAGCATCTCTGCCTCCAACCCAGCAGTTCTCTGCCAAAGCTTGTGGAGGAGGGAGAGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257963.9
3UTR TCA 90 bp GGGTTTCGCGGGACTTCCCACTACAACCAGTTCGAGGTGTGGCACTaGGTTCTCCACACAATTCGCTCTCAGAGTCTCCATGCCATTAGG +
Preference number: 1 (lower is better)
Translates to: GFRGTSHYNQFEVWH*VLHTIRSQSLHAIR
Trigger: CCTAATGGCATGGAGACTCTGAGAGCGAATTGTGTGGAGAACTCAGTGCCACACCTCGAACTGGTTGTAGTGGGAAGTCCCGCGAAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
3UTR TCA 90 bp CGGGGGCCTTTATGGCGACGTAAGAACGGGCTTGGACTTGGTCTGTaGATCCAGAATCCAGAGGTGCAGGTAGCACTATGGATCAGGGTT +
Preference number: 1 (lower is better)
Translates to: RGPLWRRKNGLGLGL*IQNPEVQVALWIRV
Trigger: AACCCTGATCCATAGTGCTACCTGCACCTCTGGATTCTGGATTCACAGACCAAGTCCAAGCCCGTTCTTACGTCGCCATAAAGGCCCCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257963.9
3UTR GCA 90 bp AGGAGTCTAAGTTCCATCATTACCTATAAACCGCCAAGGTTCTGCTaGAGGGCGGATAGGTGGGAGGTCAGCAGGGGTAAAGACGGTCCC +
Preference number: 1 (lower is better)
Translates to: RSLSSIITYKPPRFC*RADRWEVSRGKDGP
Trigger: GGGACCGTCTTTACCCCTGCTGACCTCCCACCTATCCGCCCTGCAGCAGAACCTTGGCGGTTTATAGGTAATGATGGAACTTAGACTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257963.9
3UTR GCA 90 bp TCCTCCACAAGCTTTGGCAGAGAACTGCTGGGTTGGAGGCAGAGATaGTCTAAGGCTACATACACAATACACCTCCCCTGGGGACAGGAA +
Preference number: 1 (lower is better)
Translates to: SSTSFGRELLGWRQR*SKATYTIHLPWGQE
Trigger: TTCCTGTCCCCAGGGGAGGTGTATTGTGTATGTAGCCTTAGAGCATCTCTGCCTCCAACCCAGCAGTTCTCTGCCAAAGCTTGTGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257963.9
3UTR TCA 90 bp ATACGAGAGAGACTGAGCCTCAGGGCAAAGAGGAACTCTCACTGCTaGGTGGGAACAGGCTCAGGTGCAAGGACAAACATTTCCAGTGTG +
Preference number: 1 (lower is better)
Translates to: IRERLSLRAKRNSHC*VGTGSGARTNISSV
Trigger: CACACTGGAAATGTTTGTCCTTGCACCTGAGCCTGTTCCCACTCAGCAGTGAGAGTTCCTCTTTGCCCTGAGGCTCAGTCTCTCTCGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257963.9
3UTR TCA 90 bp CTATGCCACCACACCAGGCCCAAAGCCTTTTCTTCTTCTAGGCTGTaGACTCCAAATGGCACCCTACAGGGTCCAGGACAAGAGACTGTA +
Preference number: 1 (lower is better)
Translates to: LCHHTRPKAFSSSRL*TPNGTLQGPGQETV
Trigger: TACAGTCTCTTGTCCTGGACCCTGTAGGGTGCCATTTGGAGTTCACAGCCTAGAAGAAGAAAAGGCTTTGGGCCTGGTGTGGTGGCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426655.6
3UTR GCA 90 bp AAGAGGAGTCTAAGTTCCATCATTACCTATAAACCGCCAAGGTTCTaGTGCAGGGCGGATAGGTGGGAGGTCAGCAGGGGTAAAGACGGT +
Preference number: 1 (lower is better)
Translates to: KRSLSSIITYKPPRF*CRADRWEVSRGKDG
Trigger: ACCGTCTTTACCCCTGCTGACCTCCCACCTATCCGCCCTGCAGCAGAACCTTGGCGGTTTATAGGTAATGATGGAACTTAGACTCCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257963.9
3UTR GCA 90 bp GTCTCAAAACAGGCATCTACTTACTTGAATCAGCTCTTTTTACAGTaGTCCAGGAGTAGGACCCAAGCATGTCTTGTCCACAGATGTATT +
Preference number: 1 (lower is better)
Translates to: VSKQASTYLNQLFLQ*SRSRTQACLVHRCI
Trigger: AATACATCTGTGGACAAGACATGCTTGGGTCCTACTCCTGGAGCACTGTAAAAAGAGCTGATTCAAGTAAGTAGATGCCTGTTTTGAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257963.9
3UTR TCA 90 bp ACCAATTATGAAACCTTCTGGTCTCAAAACAGGCATCTACTTACTTaGATCAGCTCTTTTTACAGTGCTCCAGGAGTAGGACCCAAGCAT +
Preference number: 1 (lower is better)
Translates to: TNYETFWSQNRHLLT*ISSFYSAPGVGPKH
Trigger: ATGCTTGGGTCCTACTCCTGGAGCACTGTAAAAAGAGCTGATTCAAGTAAGTAGATGCCTGTTTTGAGACCAGAAGGTTTCATAATTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257963.9
3UTR-3UTR CCA 90 bp AGCACTGGCAACACCTCGGTTCCTCCGGCCCCTCCCAAGCGCCCCTGTCATGGCGCGGGCCAGGGCTCCTaGCCACAGAGGGCTGGGCAG +
Preference number: 2 (lower is better)
Translates to: STGNTSVPPAPPKRPCHGAGQGS*PQRAGQ
Trigger: CTGCCCAGCCCTCTGTGGCCAGGAGCCCTGGCCCGC...GCCATGACAGGGGCGCTTGGGAGGGGCCGGAGGAACCGAGGTGTTGCCAGTGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
3UTR-3UTR CCA 90 bp CTGCACTTCTGGTTCTTCCGGGCCACCTTGGTGTGCTGTGGGCTGGTCCCCGAAGCGGGCCAGGGCTCCTaGCCACAGAGGGCTGGGCAG +
Preference number: 2 (lower is better)
Translates to: LHFWFFRATLVCCGLVPEAGQGS*PQRAGQ
Trigger: CTGCCCAGCCCTCTGTGGCCAGGAGCCCTGGCCCGC...TTCGGGGACCAGCCCACAGCACACCAAGGTGGCCCGGAAGAACCAGAAGTGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
3UTR-3UTR GCA 90 bp AACCCTCAGGGCAGCTTAGCACTGGCAACACCTCGGTTCCTCCGGCCCCTCCCATGGCCACGTGCCAGATaGACCGGGTTTCGCGGGACT +
Preference number: 2 (lower is better)
Translates to: NPQGSLALATPRFLRPLPWPRAR*TGFRGT
Trigger: AGTCCCGCGAAACCCGGTGCATCTGGCACGTGGCCA...TGGGAGGGGCCGGAGGAACCGAGGTGTTGCCAGTGCTAAGCTGCCCTGAGGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
3UTR-3UTR CCA 90 bp GACAAAGCGGCAGATTCCGTCTCCACTGGCAGTCTCCCGGCAGCGTCCATCCCACAAGCGCCCCTGTCATaGCTCCTGGCCACGTGCCAG +
Preference number: 2 (lower is better)
Translates to: DKAADSVSTGSLPAASIPQAPLS*LLATCQ
Trigger: CTGGCACGTGGCCAGGAGCCATGACAGGGGCGCTTG...TGGGATGGACGCTGCCGGGAGACTGCCAGTGGAGACGGAATCTGCCGCTTTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
3UTR-3UTR TCA 90 bp GCACTTCTGGTTCTTCCGGGCCACCTTGGTGTGCTGTGGGCTGGTCCCCGAAGGAACCCAACATGGGAGTaGGCGAGTCTCTCCCGGGCT +
Preference number: 2 (lower is better)
Translates to: ALLVLPGHLGVLWAGPRRNPTWE*ASLSRA
Trigger: AGCCCGGGAGAGACTCGCTCACTCCCATGTTGGGTT...CCTTCGGGGACCAGCCCACAGCACACCAAGGTGGCCCGGAAGAACCAGAAGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
3UTR-3UTR GCA 90 bp GACAAAGCGGCAGATTCCGTCTCCACTGGCAGTCTCCCGGCAGCGTCCATCCCATGGCCACGTGCCAGATaGACCGGGTTTCGCGGGACT +
Preference number: 2 (lower is better)
Translates to: DKAADSVSTGSLPAASIPWPRAR*TGFRGT
Trigger: AGTCCCGCGAAACCCGGTGCATCTGGCACGTGGCCA...TGGGATGGACGCTGCCGGGAGACTGCCAGTGGAGACGGAATCTGCCGCTTTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
3UTR-3UTR CCA 90 bp AGGAGGGGAAAGCGCGGCTCAGAGCTGCCTGTGAGAGGGGCTGCACTTCTGGTTCCCTGTCATGGCTCCTaGCCACGTGCCAGATGCACC +
Preference number: 2 (lower is better)
Translates to: RRGKRGSELPVRGAALLVPCHGS*PRARCT
Trigger: GGTGCATCTGGCACGTGGCCAGGAGCCATGACAGGG...AACCAGAAGTGCAGCCCCTCTCACAGGCAGCTCTGAGCCGCGCTTTCCCCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
3UTR-3UTR GCA 90 bp GCCTGTGAGAGGGGCTGCACTTCTGGTTCTTCCGGGCCACCTTGGTGTGCTGTGGTGCGTAGTTCTCGCTaGCAGGAGCTCCGTGTGGAG +
Preference number: 2 (lower is better)
Translates to: ACERGCTSGSSGPPWCAVVRSSR*QELRVE
Trigger: CTCCACACGGAGCTCCTGGCAGCGAGAACTACGCAC...CACAGCACACCAAGGTGGCCCGGAAGAACCAGAAGTGCAGCCCCTCTCACAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
3UTR-3UTR CCA 90 bp GACAAAGCGGCAGATTCCGTCTCCACTGGCAGTCTCCCGGCAGCGTCCATCCCACTGGCCACAGAGGGCTaGGCAGAAACGAGAGGTAGG +
Preference number: 2 (lower is better)
Translates to: DKAADSVSTGSLPAASIPLATEG*AETRGR
Trigger: CCTACCTCTCGTTTCTGCCCAGCCCTCTGTGGCCAG...TGGGATGGACGCTGCCGGGAGACTGCCAGTGGAGACGGAATCTGCCGCTTTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
3UTR CAA 90 bp TGTGGGGTAAGGGCAGAAGGGCCAACTGGGGAGTGGGCTAGTGGCTaGGGAGTGGACGTGTGTTGGCAGATCCCAGAGGCTACTTGTGAC +
Preference number: 2 (lower is better)
Translates to: CGVRAEGPTGEWASG*GVDVCWQIPEATCD
Trigger: GTCACAAGTAGCCTCTGGGATCTGCCAACACACGTCCACTCCCAAGCCACTAGCCCACTCCCCAGTTGGCCCTTCTGCCCTTACCCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257963.9
3UTR-3UTR CCA 90 bp TGGGAGCTTCCCAAAGACCTGCTCCATCTTCCCCAGAGGTGGAAGAGTTGGACTTCTTCCGGGCCACCTTaGTGTGCTGTGGGCTGGTCC +
Preference number: 2 (lower is better)
Translates to: WELPKDLLHLPQRWKSWTSSGPP*CAVGWS
Trigger: GGACCAGCCCACAGCACACCAAGGTGGCCCGGAAGA...AGTCCAACTCTTCCACCTCTGGGGAAGATGGAGCAGGTCTTTGGGAAGCTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257963.9
3UTR-3UTR CCA 90 bp ACAGAAGTACCGAGAATGCCGTTCGGGGGCCTTTATGGCGACGTAAGAACGGGCCACAGAGTACCACTGTaGCATGAGGGGCTCTGGGGG +
Preference number: 2 (lower is better)
Translates to: TEVPRMPFGGLYGDVRTGHRVPL*HEGLWG
Trigger: CCCCCAGAGCCCCTCATGCCACAGTGGTACTCTGTG...GCCCGTTCTTACGTCGCCATAAAGGCCCCCGAACGGCATTCTCGGTACTTCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257963.9
3UTR-3UTR TCA 90 bp GAGGTGGGTGTGGGAGCTTCCCAAAGACCTGCTCCATCTTCCCCAGAGGTGGAATTTGGTTCCACAGTCTaGGATGGAGGAGGAGAGCTG +
Preference number: 2 (lower is better)
Translates to: EVGVGASQRPAPSSPEVEFGSTV*DGGGEL
Trigger: CAGCTCTCCTCCTCCATCTCAGACTGTGGAACCAAA...TTCCACCTCTGGGGAAGATGGAGCAGGTCTTTGGGAAGCTCCCACACCCACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257963.9
3UTR-3UTR GCA 90 bp CGGCTTCAGTTTCTCCCCAACTCTCACTTAGTGTTAAGAGTGGCAGAGGTGGGTTGGCTCCTGGCCACGTaGCAGATGCACCGGGTTTCG +
Preference number: 2 (lower is better)
Translates to: RLQFLPNSHLVLRVAEVGWLLAT*QMHRVS
Trigger: CGAAACCCGGTGCATCTGGCACGTGGCCAGGAGCCA...ACCCACCTCTGCCACTCTTAACACTAAGTGAGAGTTGGGGAGAAACTGAAGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257963.9
3UTR-3UTR GCA 90 bp AGGGTTTCCCATGAATGTGGCTTGGGAGCCACCGCGTTAGAATATACTGCTTCTATGAATCCCGTGCTATaGGCACCGGGGCACTCCCCG +
Preference number: 2 (lower is better)
Translates to: RVSHECGLGATALEYTASMNPVL*APGHSP
Trigger: CGGGGAGTGCCCCGGTGCGCATAGCACGGGATTCAT...AGAAGCAGTATATTCTAACGCGGTGGCTCCCAAGCCACATTCATGGGAAACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415850.6
3UTR-3UTR CCA 90 bp TTTGGCAGAGAACTGCTGGGTTGGAGGCAGAGATGCTCTAAGGCTACATACACATGGCATGAGGGGCTCTaGGGGAGGGAGAGACCTCCA +
Preference number: 2 (lower is better)
Translates to: FGRELLGWRQRCSKATYTWHEGL*GRERPP
Trigger: TGGAGGTCTCTCCCTCCCCCAGAGCCCCTCATGCCA...TGTGTATGTAGCCTTAGAGCATCTCTGCCTCCAACCCAGCAGTTCTCTGCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257963.9
3UTR CAA 90 bp GCCCATCCCACCCACCACCCTCACATTTTGGCCCAAAAGCCTCTTTaGTCATGGACAACTGGGCCAGCTTTGGTTCCACAGTCTGAGATG +
Preference number: 2 (lower is better)
Translates to: AHPTHHPHILAQKPL*SWTTGPALVPQSEM
Trigger: CATCTCAGACTGTGGAACCAAAGCTGGCCCAGTTGTCCATGACAAAAGAGGCTTTTGGGCCAAAATGTGAGGGTGGTGGGTGGGATGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257963.9
3UTR-3UTR TCA 90 bp GAGGTGGGTGTGGGAGCTTCCCAAAGACCTGCTCCATCTTCCCCAGAGGTGGAATGTAACATTCCAATCTaGGTCCCGAGATCTGGCTTC +
Preference number: 2 (lower is better)
Translates to: EVGVGASQRPAPSSPEVECNIPI*VPRSGF
Trigger: GAAGCCAGATCTCGGGACTCAGATTGGAATGTTACA...TTCCACCTCTGGGGAAGATGGAGCAGGTCTTTGGGAAGCTCCCACACCCACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257963.9
3UTR-3UTR TCA 90 bp TCTCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTGGCTCCTCTGGGGCCTaGCCCCATTGTCAAGAAACC +
Preference number: 2 (lower is better)
Translates to: SPHIAQVCLELLSSSYLPGSSGA*PHCQET
Trigger: GGTTTCTTGACAATGGGGTCAGGCCCCAGAGGAGCC...AGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000426655.6
3UTR-3UTR CCA 90 bp TCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTGCGCTGTGAACTCCAAATaGCACCCTACAGGGTCCAGG +
Preference number: 2 (lower is better)
Translates to: SPHCPGLSRTSELKLSSCAVNSK*HPTGSR
Trigger: CCTGGACCCTGTAGGGTGCCATTTGGAGTTCACAGC...GCAGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426655.6
3UTR-3UTR TCA 90 bp TCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTGCTCTTCTTCTAGGCTGTaGACTCCAAATGGCACCCTA +
Preference number: 2 (lower is better)
Translates to: SPHCPGLSRTSELKLSSCSSSRL*TPNGTL
Trigger: TAGGGTGCCATTTGGAGTTCACAGCCTAGAAGAAGA...GCAGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426655.6
3UTR-3UTR TCA 90 bp TCTCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTATAGTAAATAATAACTaGCACTCTCAGGGGGCTCCT +
Preference number: 2 (lower is better)
Translates to: SPHIAQVCLELLSSSYLPIVNNN*HSQGAP
Trigger: AGGAGCCCCCTGAGAGTGTCAGTTATTATTTACTAT...AGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426655.6
3UTR-3UTR CCA 90 bp TTACATTTGCATACTGAAGAGGTAAAGTGTCTAAGTGGCTATTTTACAGTCCTTCCCTGTCATGGCTCCTaGCCACGTGCCAGATGCACC +
Preference number: 2 (lower is better)
Translates to: LHLHTEEVKCLSGYFTVLPCHGS*PRARCT
Trigger: GGTGCATCTGGCACGTGGCCAGGAGCCATGACAGGG...AAGGACTGTAAAATAGCCACTTAGACACTTTACCTCTTCAGTATGCAAATGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257963.9
3UTR-3UTR CCA 90 bp TTTGTGGAGGGGGTTGTGGGGGTTCCTCTTTCTTCAGTGATCTTATATAAGAACTCAAGGAATTGGGGGTaGGGACAAAATACGAGAGAG +
Preference number: 2 (lower is better)
Translates to: FVEGVVGVPLSSVILYKNSRNWG*GQNTRE
Trigger: CTCTCTCGTATTTTGTCCCCACCCCCAATTCCTTGA...GTTCTTATATAAGATCACTGAAGAAAGAGGAACCCCCACAACCCCCTCCACAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000257963.9
3UTR-3UTR CCA 90 bp AAAGTTATTATATACCTAAGATATGCTGACCAAATCACCACCCACAGCCGTGCTCTGGCTCATTTCCCATaGCTGACACTAACACCCAAG +
Preference number: 2 (lower is better)
Translates to: KVIIYLRYADQITTHSRALAHFP*LTLTPK
Trigger: CTTGGGTGTTAGTGTCAGCCATGGGAAATGAGCCAG...AGCACGGCTGTGGGTGGTGATTTGGTCAGCATATCTTAGGTATATAATAACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257963.9
3UTR-3UTR CAA 90 bp TGGCAACACCTCGGTTCCTCCGGCCCCTCCCAAGCGCCCCTGTCATGGCTCCTGCGGGCTCTGTCCCTCTaGCGGGCCAGGGCTCCTGGC +
Preference number: 3 (lower is better)
Translates to: WQHLGSSGPSQAPLSWLLRALSL*RARAPG
Trigger: GCCAGGAGCCCTGGCCCGCAAGAGGGACAGAGCCCG...CAGGAGCCATGACAGGGGCGCTTGGGAGGGGCCGGAGGAACCGAGGTGTTGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
3UTR CCA 72 bp CCTCCGGCCCCTCCCAAGCGCCCCTGTCATGGCTCCTaGCCACGTGCCAGATGCACCGGGTTTCGCGGGACT +
Preference number: 3 (lower is better)
Translates to: PPAPPKRPCHGS*PRARCTGFRGT
Trigger: AGTCCCGCGAAACCCGGTGCATCTGGCACGTGGCCAGGAGCCATGACAGGGGCGCTTGGGAGGGGCCGGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
3UTR CCA 72 bp CTCCCGGGCTCTGTCCCTCTTGCGGGCCAGGGCTCCTaGCCACAGAGGGCTGGGCAGAAACGAGAGGTAGGC +
Preference number: 3 (lower is better)
Translates to: LPGSVPLAGQGS*PQRAGQKREVG
Trigger: GCCTACCTCTCGTTTCTGCCCAGCCCTCTGTGGCCAGGAGCCCTGGCCCGCAAGAGGGACAGAGCCCGGGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
3UTR-3UTR CAA 90 bp CACTCACACGCACGTGTAAGGGCATGGCACGAACCAGGCACAACGGGGGACGCACGGGCTCTGTCCCTCTaGCGGGCCAGGGCTCCTGGC +
Preference number: 3 (lower is better)
Translates to: HSHARVRAWHEPGTTGDARALSL*RARAPG
Trigger: GCCAGGAGCCCTGGCCCGCAAGAGGGACAGAGCCCG...TGCGTCCCCCGTTGTGCCTGGTTCGTGCCATGCCCTTACACGTGCGTGTGAGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
3UTR GCA 72 bp CCCTCCCAAGCGCCCCTGTCATGGCTCCTGGCCACGTaGCAGATGCACCGGGTTTCGCGGGACTTCCCACTA +
Preference number: 3 (lower is better)
Translates to: PSQAPLSWLLAT*QMHRVSRDFPL
Trigger: TAGTGGGAAGTCCCGCGAAACCCGGTGCATCTGGCACGTGGCCAGGAGCCATGACAGGGGCGCTTGGGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
3UTR CCA 72 bp CCCTCTTGCGGGCCAGGGCTCCTGGCCACAGAGGGCTaGGCAGAAACGAGAGGTAGGCCTCCATCGTACGCT +
Preference number: 3 (lower is better)
Translates to: PSCGPGLLATEG*AETRGRPPSYA
Trigger: AGCGTACGATGGAGGCCTACCTCTCGTTTCTGCCCAGCCCTCTGTGGCCAGGAGCCCTGGCCCGCAAGAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
3UTR CCA 72 bp GCCAGACACAGAGTACCACTGTGGCATGAGGGGCTCTaGGGGAGGGAGAGACCTCCAGGGAAGGGCACCAGG +
Preference number: 3 (lower is better)
Translates to: ARHRVPLWHEGL*GRERPPGKGTR
Trigger: CCTGGTGCCCTTCCCTGGAGGTCTCTCCCTCCCCCAGAGCCCCTCATGCCACAGTGGTACTCTGTGTCTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257963.9
3UTR GCA 72 bp AAGCGCCCCTGTCATGGCTCCTGGCCACGTGCCAGATaGACCGGGTTTCGCGGGACTTCCCACTACAACCAG +
Preference number: 3 (lower is better)
Translates to: KRPCHGSWPRAR*TGFRGTSHYNQ
Trigger: CTGGTTGTAGTGGGAAGTCCCGCGAAACCCGGTGCATCTGGCACGTGGCCAGGAGCCATGACAGGGGCGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
3UTR GCA 72 bp GGGAAAGCGCGGCTCAGAGCTGCCTGTGAGAGGGGCTaGACTTCTGGTTCTTCCGGGCCACCTTGGTGTGCT +
Preference number: 3 (lower is better)
Translates to: GKARLRAACERG*TSGSSGPPWCA
Trigger: AGCACACCAAGGTGGCCCGGAAGAACCAGAAGTGCAGCCCCTCTCACAGGCAGCTCTGAGCCGCGCTTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
3UTR CCA 72 bp GAGAGGGGCTGCACTTCTGGTTCTTCCGGGCCACCTTaGTGTGCTGTGGGCTGGTCCCCGAAGGAAACCCTC +
Preference number: 3 (lower is better)
Translates to: ERGCTSGSSGPP*CAVGWSPKETL
Trigger: GAGGGTTTCCTTCGGGGACCAGCCCACAGCACACCAAGGTGGCCCGGAAGAACCAGAAGTGCAGCCCCTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
3UTR GCA 72 bp ACGAACCAGGCACAACGGGGGACGCACCTCGGCACATaGACACACGGCTGGACAGACAAAGCGGCAGATTCC +
Preference number: 3 (lower is better)
Translates to: TNQAQRGTHLGT*THGWTDKAADS
Trigger: GGAATCTGCCGCTTTGTCTGTCCAGCCGTGTGTGCATGTGCCGAGGTGCGTCCCCCGTTGTGCCTGGTTCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
3UTR CCA 72 bp GCACTTCTGGTTCTTCCGGGCCACCTTGGTGTGCTGTaGGCTGGTCCCCGAAGGAAACCCTCAGGGCAGCTT +
Preference number: 3 (lower is better)
Translates to: ALLVLPGHLGVL*AGPRRKPSGQL
Trigger: AAGCTGCCCTGAGGGTTTCCTTCGGGGACCAGCCCACAGCACACCAAGGTGGCCCGGAAGAACCAGAAGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
3UTR CCA 72 bp GGGCAGAAGGGCCAACTGGGGAGTGGGCTAGTGGCTTaGGAGTGGACGTGTGTTGGCAGATCCCAGAGGCTA +
Preference number: 3 (lower is better)
Translates to: GQKGQLGSGLVA*EWTCVGRSQRL
Trigger: TAGCCTCTGGGATCTGCCAACACACGTCCACTCCCAAGCCACTAGCCCACTCCCCAGTTGGCCCTTCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257963.9
3UTR-3UTR CAA 90 bp TCGGCACATGCACACACGGCTGGACAGACAAAGCGGCAGATTCCGTCTCCACTGTTCTTCCGGGCCACCTaGGTGTGCTGTGGGCTGGTC +
Preference number: 3 (lower is better)
Translates to: SAHAHTAGQTKRQIPSPLFFRAT*VCCGLV
Trigger: GACCAGCCCACAGCACACCAAGGTGGCCCGGAAGAA...CAGTGGAGACGGAATCTGCCGCTTTGTCTGTCCAGCCGTGTGTGCATGTGCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
3UTR CCA 72 bp AAGGGCCAACTGGGGAGTGGGCTAGTGGCTTGGGAGTaGACGTGTGTTGGCAGATCCCAGAGGCTACTTGTG +
Preference number: 3 (lower is better)
Translates to: KGQLGSGLVAWE*TCVGRSQRLLV
Trigger: CACAAGTAGCCTCTGGGATCTGCCAACACACGTCCACTCCCAAGCCACTAGCCCACTCCCCAGTTGGCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257963.9
3UTR TCA 72 bp GAATATACTGCTTCTGATGTGAAGGAGACCACTGCATaGATCCCGTGCTATGCGCACCGGGGCACTCCCCGC +
Preference number: 3 (lower is better)
Translates to: EYTASDVKETTA*IPCYAHRGTPR
Trigger: GCGGGGAGTGCCCCGGTGCGCATAGCACGGGATTCATGCAGTGGTCTCCTTCACATCAGAAGCAGTATATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415850.6
3UTR TCA 72 bp ATAGAAAAGGTGTCTGTCTCAAACCCAACATGGGAGTaGGCGAGTCTCTCCCGGGCTCTGTCCCTCTTGCGG +
Preference number: 3 (lower is better)
Translates to: IEKVSVSNPTWE*ASLSRALSLLR
Trigger: CCGCAAGAGGGACAGAGCCCGGGAGAGACTCGCTCACTCCCATGTTGGGTTTGAGACAGACACCTTTTCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
3UTR TCA 72 bp GGAAGGGCACCAGGGAAACTAGATGCTGCTCACTACTaGAAAGAGGCACCAGCAAGCACGGACAGCATGACG +
Preference number: 3 (lower is better)
Translates to: GRAPGKLDAAHY*KEAPASTDSMT
Trigger: CGTCATGCTGTCCGTGCTTGCTGGTGCCTCTTTTCAGTAGTGAGCAGCATCTAGTTTCCCTGGTGCCCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
3UTR GCA 72 bp AGACCTCCAGGGAAGGGCACCAGGGAAACTAGATGCTaGTCACTACTGAAAAGAGGCACCAGCAAGCACGGA +
Preference number: 3 (lower is better)
Translates to: RPPGKGTRETRC*SLLKRGTSKHG
Trigger: TCCGTGCTTGCTGGTGCCTCTTTTCAGTAGTGAGCAGCATCTAGTTTCCCTGGTGCCCTTCCCTGGAGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
3UTR GCA 72 bp CTAAGTTCCATCATTACCTATAAACCGCCAAGGTTCTaGTGCAGGGCGGATAGGTGGGAGGTCAGCAGGGGT +
Preference number: 3 (lower is better)
Translates to: LSSIITYKPPRF*CRADRWEVSRG
Trigger: ACCCCTGCTGACCTCCCACCTATCCGCCCTGCAGCAGAACCTTGGCGGTTTATAGGTAATGATGGAACTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257963.9
3UTR TCA 72 bp GGGACTTCCCACTACAACCAGTTCGAGGTGTGGCACTaGGTTCTCCACACAATTCGCTCTCAGAGTCTCCAT +
Preference number: 3 (lower is better)
Translates to: GTSHYNQFEVWH*VLHTIRSQSLH
Trigger: ATGGAGACTCTGAGAGCGAATTGTGTGGAGAACTCAGTGCCACACCTCGAACTGGTTGTAGTGGGAAGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
3UTR TCA 72 bp AGACTGAGCCTCAGGGCAAAGAGGAACTCTCACTGCTaGGTGGGAACAGGCTCAGGTGCAAGGACAAACATT +
Preference number: 3 (lower is better)
Translates to: RLSLRAKRNSHC*VGTGSGARTNI
Trigger: AATGTTTGTCCTTGCACCTGAGCCTGTTCCCACTCAGCAGTGAGAGTTCCTCTTTGCCCTGAGGCTCAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257963.9
3UTR GCA 72 bp AGTTCCATCATTACCTATAAACCGCCAAGGTTCTGCTaGAGGGCGGATAGGTGGGAGGTCAGCAGGGGTAAA +
Preference number: 3 (lower is better)
Translates to: SSIITYKPPRFC*RADRWEVSRGK
Trigger: TTTACCCCTGCTGACCTCCCACCTATCCGCCCTGCAGCAGAACCTTGGCGGTTTATAGGTAATGATGGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257963.9
3UTR TCA 72 bp TTATGGCGACGTAAGAACGGGCTTGGACTTGGTCTGTaGATCCAGAATCCAGAGGTGCAGGTAGCACTATGG +
Preference number: 3 (lower is better)
Translates to: LWRRKNGLGLGL*IQNPEVQVALW
Trigger: CCATAGTGCTACCTGCACCTCTGGATTCTGGATTCACAGACCAAGTCCAAGCCCGTTCTTACGTCGCCATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257963.9
3UTR TCA 72 bp TGGCTTGGGAGCCACCGCGTTAGAATATACTGCTTCTaGTGTGAAGGAGACCACTGCATGAATCCCGTGCTA +
Preference number: 3 (lower is better)
Translates to: WLGSHRVRIYCF*CEGDHCMNPVL
Trigger: TAGCACGGGATTCATGCAGTGGTCTCCTTCACATCAGAAGCAGTATATTCTAACGCGGTGGCTCCCAAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415850.6
3UTR GCA 72 bp ACCCAGCAGGCACTTCACCCACATTTGTTGAATAAATaGCTGGAGAGGGTACAACCAGCTGGACAGTGCAAG +
Preference number: 3 (lower is better)
Translates to: TQQALHPHLLNK*LERVQPAGQCK
Trigger: CTTGCACTGTCCAGCTGGTTGTACCCTCTCCAGGCATTTATTCAACAAATGTGGGTGAAGTGCCTGCTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257963.9
3UTR TCA 72 bp AGTGGACGTGTGTTGGCAGATCCCAGAGGCTACTTGTaGCTCTGGGAAGAGGAGTCTAAGTTCCATCATTAC +
Preference number: 3 (lower is better)
Translates to: SGRVLADPRGYL*LWEEESKFHHY
Trigger: GTAATGATGGAACTTAGACTCCTCTTCCCAGAGTCACAAGTAGCCTCTGGGATCTGCCAACACACGTCCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257963.9
3UTR TCA 72 bp ATCTGGGAGATGAAAGACAGATGTAACATTCCAATCTaGGTCCCGAGATCTGGCTTCACATTCCTCGGCCCT +
Preference number: 3 (lower is better)
Translates to: IWEMKDRCNIPI*VPRSGFTFLGP
Trigger: AGGGCCGAGGAATGTGAAGCCAGATCTCGGGACTCAGATTGGAATGTTACATCTGTCTTTCATCTCCCAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257963.9
3UTR GCA 72 bp CAGGCATCTACTTACTTGAATCAGCTCTTTTTACAGTaGTCCAGGAGTAGGACCCAAGCATGTCTTGTCCAC +
Preference number: 3 (lower is better)
Translates to: QASTYLNQLFLQ*SRSRTQACLVH
Trigger: GTGGACAAGACATGCTTGGGTCCTACTCCTGGAGCACTGTAAAAAGAGCTGATTCAAGTAAGTAGATGCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257963.9
3UTR-3UTR CAA 90 bp TTTGTGGAGGGGGTTGTGGGGGTTCCTCTTTCTTCAGTGATCTTATATAAGAACCTTCACCCACATTTGTaGAATAAATGCCTGGAGAGG +
Preference number: 3 (lower is better)
Translates to: FVEGVVGVPLSSVILYKNLHPHL*NKCLER
Trigger: CCTCTCCAGGCATTTATTCAACAAATGTGGGTGAAG...GTTCTTATATAAGATCACTGAAGAAAGAGGAACCCCCACAACCCCCTCCACAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000257963.9
3UTR-3UTR CAA 90 bp TTACATTTGCATACTGAAGAGGTAAAGTGTCTAAGTGGCTATTTTACAGTCCTTCCAGAGGTGGAAGAGTaGGACTGTGTGTGGGGTAAG +
Preference number: 3 (lower is better)
Translates to: LHLHTEEVKCLSGYFTVLPEVEE*DCVWGK
Trigger: CTTACCCCACACACAGTCCAACTCTTCCACCTCTGG...AAGGACTGTAAAATAGCCACTTAGACACTTTACCTCTTCAGTATGCAAATGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR TCA 90 bp GGAGACCACTGCATGAATCCCGTGCTATGCGCACCGGGGCACTCCCCGCCACGGACACCGGGCCGGCGATaGTGCCTACCAGCTCCACCG +
Preference number: 4 (lower is better)
Translates to: GDHCMNPVLCAPGHSPPRTPGRR*CLPAPP
Trigger: CGGTGGAGCTGGTAGGCATCATCGCCGGCCCGGTGT...CCGTGGCGGGGAGTGCCCCGGTGCGCATAGCACGGGATTCATGCAGTGGTCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS-3UTR GCA 90 bp GAAGGAGACCACTGCATGAATCCCGTGCTATGCGCACCGGGGCACTCCCCGCCAGCCCGGACCCGCCGCTaGCGGCGAGCAGGAGGACAA +
Preference number: 4 (lower is better)
Translates to: EGDHCMNPVLCAPGHSPPARTRR*RRAGGQ
Trigger: TTGTCCTCCTGCTCGCCGGCAGCGGCGGGTCCGGGC...TGGCGGGGAGTGCCCCGGTGCGCATAGCACGGGATTCATGCAGTGGTCTCCTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS-3UTR CCA 90 bp AACCCTCAGGGCAGCTTAGCACTGGCAACACCTCGGTTCCTCCGGCCCCTCCCAGCGGGCCAGGGCTCCTaGCCACAGAGGGCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: NPQGSLALATPRFLRPLPAGQGS*PQRAGQ
Trigger: CTGCCCAGCCCTCTGTGGCCAGGAGCCCTGGCCCGC...TGGGAGGGGCCGGAGGAACCGAGGTGTTGCCAGTGCTAAGCTGCCCTGAGGGTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR CCA 90 bp CTCACACGCACGTGTAAGGGCATGGCACGAACCAGGCACAACGGGGGACGCACCGCGGGCCAGGGCTCCTaGCCACAGAGGGCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: LTRTCKGMARTRHNGGRTAGQGS*PQRAGQ
Trigger: CTGCCCAGCCCTCTGTGGCCAGGAGCCCTGGCCCGC...GGTGCGTCCCCCGTTGTGCCTGGTTCGTGCCATGCCCTTACACGTGCGTGTGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR GCA 90 bp CTCCATCGTACGCTCAACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCGCCCGGACCCGCCGCTaGCGGCGAGCAGGAGGACAA +
Preference number: 4 (lower is better)
Translates to: LHRTLNAAAVRSSRCQELARTRR*RRAGGQ
Trigger: TTGTCCTCCTGCTCGCCGGCAGCGGCGGGTCCGGGC...GAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTTGAGCGTACGATGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000541224.5
CDS-3UTR CCA 90 bp CCTGTCATGGCTCCTGGCCACGTGCCAGATGCACCGGGTTTCGCGGGACTTCCCCCACCGGGCCCCACATaGACGGGTGCTCAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: PVMAPGHVPDAPGFAGLPPPGPT*TGAQAP
Trigger: AGGAGCCTGAGCACCCGTCCATGTGGGGCCCGGTGG...GGGAAGTCCCGCGAAACCCGGTGCATCTGGCACGTGGCCAGGAGCCATGACAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR TCA 90 bp GGCCTCCATCGTACGCTCAACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGACACCGGGCCGGCGATaGTGCCTACCAGCTCCACCG +
Preference number: 4 (lower is better)
Translates to: GLHRTLNAAAVRSSRCQETPGRR*CLPAPP
Trigger: CGGTGGAGCTGGTAGGCATCATCGCCGGCCCGGTGT...CTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTTGAGCGTACGATGGAGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR TCA 90 bp ACACGCACGTGTAAGGGCATGGCACGAACCAGGCACAACGGGGGACGCACCTCGACACCGGGCCGGCGATaGTGCCTACCAGCTCCACCG +
Preference number: 4 (lower is better)
Translates to: TRTCKGMARTRHNGGRTSTPGRR*CLPAPP
Trigger: CGGTGGAGCTGGTAGGCATCATCGCCGGCCCGGTGT...CGAGGTGCGTCCCCCGTTGTGCCTGGTTCGTGCCATGCCCTTACACGTGCGTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR TCA 90 bp GCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCCGTGTGGAGAGAGGGAGCGGGAGAGGGTCTTCTTaGTGCGCAGGGCCGTCAGGC +
Preference number: 4 (lower is better)
Translates to: AAAVRSSRCQELRVERGSGRGSS*CAGPSG
Trigger: GCCTGACGGCCCTGCGCATCAAGAAGACCCTCTCCC...GCTCCCTCTCTCCACACGGAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR GCA 90 bp GTTCCTCCGGCCCCTCCCAAGCGCCCCTGTCATGGCTCCTGGCCACGTGCCAGAAGCAGCAGTGGGTGTTaGGCAGGTCCTCCGAGCTCA +
Preference number: 4 (lower is better)
Translates to: VPPAPPKRPCHGSWPRARSSSGC*AGPPSS
Trigger: TGAGCTCGGAGGACCTGCGCAACACCCACTGCTGCT...TCTGGCACGTGGCCAGGAGCCATGACAGGGGCGCTTGGGAGGGGCCGGAGGAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR GCA 90 bp AGCACTGGCAACACCTCGGTTCCTCCGGCCCCTCCCAAGCGCCCCTGTCATGGCCCGCCAAGGTTCTGCTaGAGGGCGGATAGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: STGNTSVPPAPPKRPCHGPPRFC*RADRWE
Trigger: CTCCCACCTATCCGCCCTGCAGCAGAACCTTGGCGG...GCCATGACAGGGGCGCTTGGGAGGGGCCGGAGGAACCGAGGTGTTGCCAGTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR GCA 90 bp GGAGACCACTGCATGAATCCCGTGCTATGCGCACCGGGGCACTCCCCGCCACGGATGAATCCCGTGCTATaGGCACCGGGGCACTCCCCG +
Preference number: 4 (lower is better)
Translates to: GDHCMNPVLCAPGHSPPRMNPVL*APGHSP
Trigger: CGGGGAGTGCCCCGGTGCGCATAGCACGGGATTCAT...CCGTGGCGGGGAGTGCCCCGGTGCGCATAGCACGGGATTCATGCAGTGGTCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS-3UTR CCA 90 bp GGAGACCACTGCATGAATCCCGTGCTATGCGCACCGGGGCACTCCCCGCCACGGTGGCCTGGAGGCAGCTaGTGCACGCACACAGCAGAG +
Preference number: 4 (lower is better)
Translates to: GDHCMNPVLCAPGHSPPRWPGGS*CTHTAE
Trigger: CTCTGCTGTGTGCGTGCACCAGCTGCCTCCAGGCCA...CCGTGGCGGGGAGTGCCCCGGTGCGCATAGCACGGGATTCATGCAGTGGTCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS-3UTR TCA 90 bp AGGGCTGGGCAGAAACGAGAGGTAGGCCTCCATCGTACGCTCAACGCGGCAGCTACACCGGGCCGGCGATaGTGCCTACCAGCTCCACCG +
Preference number: 4 (lower is better)
Translates to: RAGQKREVGLHRTLNAAATPGRR*CLPAPP
Trigger: CGGTGGAGCTGGTAGGCATCATCGCCGGCCCGGTGT...AGCTGCCGCGTTGAGCGTACGATGGAGGCCTACCTCTCGTTTCTGCCCAGCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR TCA 90 bp AGCGCCCCTGTCATGGCTCCTGGCCACGTGCCAGATGCACCGGGTTTCGCGGGATCAGTGACTGCATCATaGCGGACAGCCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SAPVMAPGHVPDAPGFAGSVTAS*RTARPR
Trigger: CCTGGGCCTGGCTGTCCGTCATGATGCAGTCACTGA...TCCCGCGAAACCCGGTGCATCTGGCACGTGGCCAGGAGCCATGACAGGGGCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR TCA 90 bp AACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCCGTGTGGAGAGAGGGGGGAGAGGGTCTTCTTaGTGCGCAGGGCCGTCAGGC +
Preference number: 4 (lower is better)
Translates to: NAAAVRSSRCQELRVERGGRGSS*CAGPSG
Trigger: GCCTGACGGCCCTGCGCATCAAGAAGACCCTCTCCC...CCCTCTCTCCACACGGAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR CCA 90 bp GCCCCTGTCATGGCTCCTGGCCACGTGCCAGATGCACCGGGTTTCGCGGGACTTTGGCCTGGAGGCAGCTaGTGCACGCACACAGCAGAG +
Preference number: 4 (lower is better)
Translates to: APVMAPGHVPDAPGFAGLWPGGS*CTHTAE
Trigger: CTCTGCTGTGTGCGTGCACCAGCTGCCTCCAGGCCA...AAGTCCCGCGAAACCCGGTGCATCTGGCACGTGGCCAGGAGCCATGACAGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR CCA 90 bp CTCAACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCCGTGTGGAGAGACCACCGGGCCCCACATaGACGGGTGCTCAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: LNAAAVRSSRCQELRVERPPGPT*TGAQAP
Trigger: AGGAGCCTGAGCACCCGTCCATGTGGGGCCCGGTGG...TCTCTCCACACGGAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR CCA 90 bp GGAGACCACTGCATGAATCCCGTGCTATGCGCACCGGGGCACTCCCCGCCACGGCGGGCCACTGTGCGCTaGACAAAGAGGGGTAACCCT +
Preference number: 4 (lower is better)
Translates to: GDHCMNPVLCAPGHSPPRRATVR*TKRGNP
Trigger: AGGGTTACCCCTCTTTGTCCAGCGCACAGTGGCCCG...CCGTGGCGGGGAGTGCCCCGGTGCGCATAGCACGGGATTCATGCAGTGGTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS-3UTR CCA 90 bp CGTACGCTCAACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCCGTGTGCAAGCGCCCCTGTCATaGCTCCTGGCCACGTGCCAG +
Preference number: 4 (lower is better)
Translates to: RTLNAAAVRSSRCQELRVQAPLS*LLATCQ
Trigger: CTGGCACGTGGCCAGGAGCCATGACAGGGGCGCTTG...CACACGGAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTTGAGCGTACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR CCA 90 bp AGCACTGGCAACACCTCGGTTCCTCCGGCCCCTCCCAAGCGCCCCTGTCATGGCTGGTGTGCTGTGGGCTaGTCCCCGAAGGAAACCCTC +
Preference number: 4 (lower is better)
Translates to: STGNTSVPPAPPKRPCHGWCAVG*SPKETL
Trigger: GAGGGTTTCCTTCGGGGACCAGCCCACAGCACACCA...GCCATGACAGGGGCGCTTGGGAGGGGCCGGAGGAACCGAGGTGTTGCCAGTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR CCA 90 bp TGGCAACACCTCGGTTCCTCCGGCCCCTCCCAAGCGCCCCTGTCATGGCTCCTGCACAGAGTACCACTGTaGCATGAGGGGCTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: WQHLGSSGPSQAPLSWLLHRVPL*HEGLWG
Trigger: CCCCCAGAGCCCCTCATGCCACAGTGGTACTCTGTG...CAGGAGCCATGACAGGGGCGCTTGGGAGGGGCCGGAGGAACCGAGGTGTTGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR TCA 90 bp CCACAGAGGGCTGGGCAGAAACGAGAGGTAGGCCTCCATCGTACGCTCAACGCGGGTGCTCAGGCTCCTTaGGGTGACCACTGGGCACCC +
Preference number: 4 (lower is better)
Translates to: PQRAGQKREVGLHRTLNAGAQAP*GDHWAP
Trigger: GGGTGCCCAGTGGTCACCTCAAGGAGCCTGAGCACC...CGCGTTGAGCGTACGATGGAGGCCTACCTCTCGTTTCTGCCCAGCCCTCTGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR TCA 90 bp CATCGTACGCTCAACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCCGTGGTGCTCAGGCTCCTTaGGGTGACCACTGGGCACCC +
Preference number: 4 (lower is better)
Translates to: HRTLNAAAVRSSRCQELRGAQAP*GDHWAP
Trigger: GGGTGCCCAGTGGTCACCTCAAGGAGCCTGAGCACC...ACGGAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTTGAGCGTACGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR TCA 90 bp GCTGGACAGACAAAGCGGCAGATTCCGTCTCCACTGGCAGTCTCCCGGCAGCGTGGGAGAGGGTCTTCTTaGTGCGCAGGGCCGTCAGGC +
Preference number: 4 (lower is better)
Translates to: AGQTKRQIPSPLAVSRQRGRGSS*CAGPSG
Trigger: GCCTGACGGCCCTGCGCATCAAGAAGACCCTCTCCC...ACGCTGCCGGGAGACTGCCAGTGGAGACGGAATCTGCCGCTTTGTCTGTCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR TCA 90 bp GCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCCGTGTGGAGAGAGGGAGCAACCCAACATGGGAGTaGGCGAGTCTCTCCCGGGCT +
Preference number: 4 (lower is better)
Translates to: AAAVRSSRCQELRVERGSNPTWE*ASLSRA
Trigger: AGCCCGGGAGAGACTCGCTCACTCCCATGTTGGGTT...GCTCCCTCTCTCCACACGGAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR GCA 90 bp GGAGACCACTGCATGAATCCCGTGCTATGCGCACCGGGGCACTCCCCGCCACGGCTCCATGTGCAGGTGTaGCAGCCCACTAGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: GDHCMNPVLCAPGHSPPRLHVQV*QPTSSR
Trigger: TCTGCTGCTAGTGGGCTGGCACACCTGCACATGGAG...CCGTGGCGGGGAGTGCCCCGGTGCGCATAGCACGGGATTCATGCAGTGGTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS-3UTR GCA 90 bp ACACGCACGTGTAAGGGCATGGCACGAACCAGGCACAACGGGGGACGCACCTCGTGGCCACGTGCCAGATaGACCGGGTTTCGCGGGACT +
Preference number: 4 (lower is better)
Translates to: TRTCKGMARTRHNGGRTSWPRAR*TGFRGT
Trigger: AGTCCCGCGAAACCCGGTGCATCTGGCACGTGGCCA...CGAGGTGCGTCCCCCGTTGTGCCTGGTTCGTGCCATGCCCTTACACGTGCGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR CCA 90 bp AACCCTCAGGGCAGCTTAGCACTGGCAACACCTCGGTTCCTCCGGCCCCTCCCATGGCCTGGAGGCAGCTaGTGCACGCACACAGCAGAG +
Preference number: 4 (lower is better)
Translates to: NPQGSLALATPRFLRPLPWPGGS*CTHTAE
Trigger: CTCTGCTGTGTGCGTGCACCAGCTGCCTCCAGGCCA...TGGGAGGGGCCGGAGGAACCGAGGTGTTGCCAGTGCTAAGCTGCCCTGAGGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR CCA 90 bp TGGCAACACCTCGGTTCCTCCGGCCCCTCCCAAGCGCCCCTGTCATGGCTCCTGGGACCAGCTCCACTTTaGGGATGCAGGTGCGCACAT +
Preference number: 4 (lower is better)
Translates to: WQHLGSSGPSQAPLSWLLGPAPL*GCRCAH
Trigger: ATGTGCGCACCTGCATCCCCAAAGTGGAGCTGGTCC...CAGGAGCCATGACAGGGGCGCTTGGGAGGGGCCGGAGGAACCGAGGTGTTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR CCA 90 bp ACGTGTAAGGGCATGGCACGAACCAGGCACAACGGGGGACGCACCTCGGCACATCAAGCGCCCCTGTCATaGCTCCTGGCCACGTGCCAG +
Preference number: 4 (lower is better)
Translates to: TCKGMARTRHNGGRTSAHQAPLS*LLATCQ
Trigger: CTGGCACGTGGCCAGGAGCCATGACAGGGGCGCTTG...ATGTGCCGAGGTGCGTCCCCCGTTGTGCCTGGTTCGTGCCATGCCCTTACACGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR CCA 90 bp GCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCCGTGTGGAGAGAGGGAGCTGGTGTGCTGTGGGCTaGTCCCCGAAGGAAACCCTC +
Preference number: 4 (lower is better)
Translates to: AAAVRSSRCQELRVERGSWCAVG*SPKETL
Trigger: GAGGGTTTCCTTCGGGGACCAGCCCACAGCACACCA...GCTCCCTCTCTCCACACGGAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR CCA 90 bp ACACGCACGTGTAAGGGCATGGCACGAACCAGGCACAACGGGGGACGCACCTCGTCTTCCGGGCCACCTTaGTGTGCTGTGGGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: TRTCKGMARTRHNGGRTSSSGPP*CAVGWS
Trigger: GGACCAGCCCACAGCACACCAAGGTGGCCCGGAAGA...CGAGGTGCGTCCCCCGTTGTGCCTGGTTCGTGCCATGCCCTTACACGTGCGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR CCA 90 bp CTGGTTCTTCCGGGCCACCTTGGTGTGCTGTGGGCTGGTCCCCGAAGGAAACCCTGGCATGAGGGGCTCTaGGGGAGGGAGAGACCTCCA +
Preference number: 4 (lower is better)
Translates to: LVLPGHLGVLWAGPRRKPWHEGL*GRERPP
Trigger: TGGAGGTCTCTCCCTCCCCCAGAGCCCCTCATGCCA...GGGTTTCCTTCGGGGACCAGCCCACAGCACACCAAGGTGGCCCGGAAGAACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR TCA 90 bp CTGTCATGGCTCCTGGCCACGTGCCAGATGCACCGGGTTTCGCGGGACTTCCCATCAGTGACTGCATCATaGCGGACAGCCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LSWLLATCQMHRVSRDFPSVTAS*RTARPR
Trigger: CCTGGGCCTGGCTGTCCGTCATGATGCAGTCACTGA...TGGGAAGTCCCGCGAAACCCGGTGCATCTGGCACGTGGCCAGGAGCCATGACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR TCA 90 bp CTGGTTCTTCCGGGCCACCTTGGTGTGCTGTGGGCTGGTCCCCGAAGGAAACCCCGTCTTCCTGCACGCTaGGCTGGGAGAGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: LVLPGHLGVLWAGPRRKPRLPAR*AGRGSS
Trigger: AGAAGACCCTCTCCCAGCTCAGCGTGCAGGAAGACG...GGGTTTCCTTCGGGGACCAGCCCACAGCACACCAAGGTGGCCCGGAAGAACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR TCA 90 bp ACAGAGGGCTGGGCAGAAACGAGAGGTAGGCCTCCATCGTACGCTCAACGCGGCCAAGCACGGACAGCATaGCGACCACACCCCCGACCT +
Preference number: 4 (lower is better)
Translates to: TEGWAETRGRPPSYAQRGQARTA*RPHPRP
Trigger: AGGTCGGGGGTGTGGTCGTCATGCTGTCCGTGCTTG...GCCGCGTTGAGCGTACGATGGAGGCCTACCTCTCGTTTCTGCCCAGCCCTCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR GCA 90 bp GGAGCTTCCCAAAGACCTGCTCCATCTTCCCCAGAGGTGGAAGAGTTGGACTGTGCCCGGACCCGCCGCTaGCGGCGAGCAGGAGGACAA +
Preference number: 4 (lower is better)
Translates to: GASQRPAPSSPEVEELDCARTRR*RRAGGQ
Trigger: TTGTCCTCCTGCTCGCCGGCAGCGGCGGGTCCGGGC...ACAGTCCAACTCTTCCACCTCTGGGGAAGATGGAGCAGGTCTTTGGGAAGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR GCA 90 bp GCCCCTGTCATGGCTCCTGGCCACGTGCCAGATGCACCGGGTTTCGCGGGACTTGCTCCACTTTGGGGATaGAGGTGCGCACATGGTGCT +
Preference number: 4 (lower is better)
Translates to: APVMAPGHVPDAPGFAGLAPLWG*RCAHGA
Trigger: AGCACCATGTGCGCACCTGCATCCCCAAAGTGGAGC...AAGTCCCGCGAAACCCGGTGCATCTGGCACGTGGCCAGGAGCCATGACAGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR GCA 90 bp CGTACGCTCAACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCCGTGTGAGCAGCAGTGGGTGTTaGGCAGGTCCTCCGAGCTCA +
Preference number: 4 (lower is better)
Translates to: RTLNAAAVRSSRCQELRVSSSGC*AGPPSS
Trigger: TGAGCTCGGAGGACCTGCGCAACACCCACTGCTGCT...CACACGGAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTTGAGCGTACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR GCA 90 bp GCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCCGTGTGGAGAGAGGGAGCCTCCATGTGCAGGTGTaGCAGCCCACTAGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: AAAVRSSRCQELRVERGSLHVQV*QPTSSR
Trigger: TCTGCTGCTAGTGGGCTGGCACACCTGCACATGGAG...GCTCCCTCTCTCCACACGGAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR GCA 90 bp GGCTGCACTTCTGGTTCTTCCGGGCCACCTTGGTGTGCTGTGGGCTGGTCCCCGCTCCATGTGCAGGTGTaGCAGCCCACTAGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: GCTSGSSGPPWCAVGWSPLHVQV*QPTSSR
Trigger: TCTGCTGCTAGTGGGCTGGCACACCTGCACATGGAG...CGGGGACCAGCCCACAGCACACCAAGGTGGCCCGGAAGAACCAGAAGTGCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR GCA 90 bp TGGCAACACCTCGGTTCCTCCGGCCCCTCCCAAGCGCCCCTGTCATGGCTCCTGATCTTCACGTCTTCCTaGACGCTGAGCTGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: WQHLGSSGPSQAPLSWLLIFTSS*TLSWER
Trigger: CCTCTCCCAGCTCAGCGTGCAGGAAGACGTGAAGAT...CAGGAGCCATGACAGGGGCGCTTGGGAGGGGCCGGAGGAACCGAGGTGTTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR GCA 90 bp AACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCCGTGTGGAGAGAGGGGTGCGTAGTTCTCGCTaGCAGGAGCTCCGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: NAAAVRSSRCQELRVERGVRSSR*QELRVE
Trigger: CTCCACACGGAGCTCCTGGCAGCGAGAACTACGCAC...CCCTCTCTCCACACGGAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR GCA 90 bp GCCTGTGAGAGGGGCTGCACTTCTGGTTCTTCCGGGCCACCTTGGTGTGCTGTGTGGCCACGTGCCAGATaGACCGGGTTTCGCGGGACT +
Preference number: 4 (lower is better)
Translates to: ACERGCTSGSSGPPWCAVWPRAR*TGFRGT
Trigger: AGTCCCGCGAAACCCGGTGCATCTGGCACGTGGCCA...CACAGCACACCAAGGTGGCCCGGAAGAACCAGAAGTGCAGCCCCTCTCACAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR GCA 90 bp CCACAGAGGGCTGGGCAGAAACGAGAGGTAGGCCTCCATCGTACGCTCAACGCGTGGCTCCTGGCCACGTaGCAGATGCACCGGGTTTCG +
Preference number: 4 (lower is better)
Translates to: PQRAGQKREVGLHRTLNAWLLAT*QMHRVS
Trigger: CGAAACCCGGTGCATCTGGCACGTGGCCAGGAGCCA...CGCGTTGAGCGTACGATGGAGGCCTACCTCTCGTTTCTGCCCAGCCCTCTGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR GCA 90 bp CTGCACTTCTGGTTCTTCCGGGCCACCTTGGTGTGCTGTGGGCTGGTCCCCGAATGGCTCCTGGCCACGTaGCAGATGCACCGGGTTTCG +
Preference number: 4 (lower is better)
Translates to: LHFWFFRATLVCCGLVPEWLLAT*QMHRVS
Trigger: CGAAACCCGGTGCATCTGGCACGTGGCCAGGAGCCA...TTCGGGGACCAGCCCACAGCACACCAAGGTGGCCCGGAAGAACCAGAAGTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR GCA 90 bp CGTACGCTCAACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCCGTGTGGAAGACCCATGCAGATaGCTCCCTCCCACCCCAGAC +
Preference number: 4 (lower is better)
Translates to: RTLNAAAVRSSRCQELRVEDPCR*LPPTPD
Trigger: GTCTGGGGTGGGAGGGAGGCATCTGCATGGGTCTTC...CACACGGAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTTGAGCGTACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR CCA 90 bp GAGGTAGGCCTCCATCGTACGCTCAACGCGGCAGCTGTGCGTAGTTCTCGCTGCTGGCCTGGAGGCAGCTaGTGCACGCACACAGCAGAG +
Preference number: 4 (lower is better)
Translates to: EVGLHRTLNAAAVRSSRCWPGGS*CTHTAE
Trigger: CTCTGCTGTGTGCGTGCACCAGCTGCCTCCAGGCCA...GCAGCGAGAACTACGCACAGCTGCCGCGTTGAGCGTACGATGGAGGCCTACCTC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR CCA 90 bp AGGAGACCACTGCATGAATCCCGTGCTATGCGCACCGGGGCACTCCCCGCCACGTCTCACACGTGTAGTTaGCCTGGAGGCAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: RRPLHESRAMRTGALPATSHTCS*PGGSWC
Trigger: GCACCAGCTGCCTCCAGGCCAACTACACGTGTGAGA...CGTGGCGGGGAGTGCCCCGGTGCGCATAGCACGGGATTCATGCAGTGGTCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS-3UTR CCA 90 bp GGGCAGAAACGAGAGGTAGGCCTCCATCGTACGCTCAACGCGGCAGCTGTGCGTCCCTGTCATGGCTCCTaGCCACGTGCCAGATGCACC +
Preference number: 4 (lower is better)
Translates to: GQKREVGLHRTLNAAAVRPCHGS*PRARCT
Trigger: GGTGCATCTGGCACGTGGCCAGGAGCCATGACAGGG...ACGCACAGCTGCCGCGTTGAGCGTACGATGGAGGCCTACCTCTCGTTTCTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR CCA 90 bp CCACAGAGGGCTGGGCAGAAACGAGAGGTAGGCCTCCATCGTACGCTCAACGCGCCCTGTCATGGCTCCTaGCCACGTGCCAGATGCACC +
Preference number: 4 (lower is better)
Translates to: PQRAGQKREVGLHRTLNAPCHGS*PRARCT
Trigger: GGTGCATCTGGCACGTGGCCAGGAGCCATGACAGGG...CGCGTTGAGCGTACGATGGAGGCCTACCTCTCGTTTCTGCCCAGCCCTCTGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR CCA 90 bp TTCCGGGCCACCTTGGTGTGCTGTGGGCTGGTCCCCGAAGGAAACCCTCAGGGCCACCTTGGTGTGCTGTaGGCTGGTCCCCGAAGGAAA +
Preference number: 4 (lower is better)
Translates to: FRATLVCCGLVPEGNPQGHLGVL*AGPRRK
Trigger: TTTCCTTCGGGGACCAGCCCACAGCACACCAAGGTG...GCCCTGAGGGTTTCCTTCGGGGACCAGCCCACAGCACACCAAGGTGGCCCGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR CCA 90 bp GAGGGCTGGGCAGAAACGAGAGGTAGGCCTCCATCGTACGCTCAACGCGGCAGCGAGGGGCTGCACTTCTaGTTCTTCCGGGCCACCTTG +
Preference number: 4 (lower is better)
Translates to: EGWAETRGRPPSYAQRGSEGLHF*FFRATL
Trigger: CAAGGTGGCCCGGAAGAACCAGAAGTGCAGCCCCTC...GCTGCCGCGTTGAGCGTACGATGGAGGCCTACCTCTCGTTTCTGCCCAGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR CCA 90 bp GTTCCTCCGGCCCCTCCCAAGCGCCCCTGTCATGGCTCCTGGCCACGTGCCAGATTCCACAGTCTGAGATaGAGGAGGAGAGCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: VPPAPPKRPCHGSWPRARFHSLR*RRRAVL
Trigger: CAGCACAGCTCTCCTCCTCCATCTCAGACTGTGGAA...TCTGGCACGTGGCCAGGAGCCATGACAGGGGCGCTTGGGAGGGGCCGGAGGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR CCA 90 bp AGCGCCCCTGTCATGGCTCCTGGCCACGTGCCAGATGCACCGGGTTTCGCGGGACTAGTGGCTTGGGAGTaGACGTGTGTTGGCAGATCC +
Preference number: 4 (lower is better)
Translates to: SAPVMAPGHVPDAPGFAGLVAWE*TCVGRS
Trigger: GGATCTGCCAACACACGTCCACTCCCAAGCCACTAG...TCCCGCGAAACCCGGTGCATCTGGCACGTGGCCAGGAGCCATGACAGGGGCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR TCA 90 bp GATGCACCGGGTTTCGCGGGACTTCCCACTACAACCAGTTCGAGGTGTGGCACTGGTGCTCAGGCTCCTTaGGGTGACCACTGGGCACCC +
Preference number: 4 (lower is better)
Translates to: DAPGFAGLPTTTSSRCGTGAQAP*GDHWAP
Trigger: GGGTGCCCAGTGGTCACCTCAAGGAGCCTGAGCACC...AGTGCCACACCTCGAACTGGTTGTAGTGGGAAGTCCCGCGAAACCCGGTGCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR TCA 90 bp CTCCATCGTACGCTCAACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCTCAGTGACTGCATCATaGCGGACAGCCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LHRTLNAAAVRSSRCQELSVTAS*RTARPR
Trigger: CCTGGGCCTGGCTGTCCGTCATGATGCAGTCACTGA...GAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTTGAGCGTACGATGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR TCA 90 bp CACTCACACGCACGTGTAAGGGCATGGCACGAACCAGGCACAACGGGGGACGCACGTCTTCCTGCACGCTaGGCTGGGAGAGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: HSHARVRAWHEPGTTGDARLPAR*AGRGSS
Trigger: AGAAGACCCTCTCCCAGCTCAGCGTGCAGGAAGACG...TGCGTCCCCCGTTGTGCCTGGTTCGTGCCATGCCCTTACACGTGCGTGTGAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR TCA 90 bp CCACAGAGGGCTGGGCAGAAACGAGAGGTAGGCCTCCATCGTACGCTCAACGCGCGTCTTCCTGCACGCTaGGCTGGGAGAGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: PQRAGQKREVGLHRTLNARLPAR*AGRGSS
Trigger: AGAAGACCCTCTCCCAGCTCAGCGTGCAGGAAGACG...CGCGTTGAGCGTACGATGGAGGCCTACCTCTCGTTTCTGCCCAGCCCTCTGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR TCA 90 bp AGGAGACCACTGCATGAATCCCGTGCTATGCGCACCGGGGCACTCCCCGCCACGAAGGAGACCACTGCATaGATCCCGTGCTATGCGCAC +
Preference number: 4 (lower is better)
Translates to: RRPLHESRAMRTGALPATKETTA*IPCYAH
Trigger: GTGCGCATAGCACGGGATTCATGCAGTGGTCTCCTT...CGTGGCGGGGAGTGCCCCGGTGCGCATAGCACGGGATTCATGCAGTGGTCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS-3UTR GCA 90 bp CTGTCATGGCTCCTGGCCACGTGCCAGATGCACCGGGTTTCGCGGGACTTCCCAGCTCCACTTTGGGGATaGAGGTGCGCACATGGTGCT +
Preference number: 4 (lower is better)
Translates to: LSWLLATCQMHRVSRDFPAPLWG*RCAHGA
Trigger: AGCACCATGTGCGCACCTGCATCCCCAAAGTGGAGC...TGGGAAGTCCCGCGAAACCCGGTGCATCTGGCACGTGGCCAGGAGCCATGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR GCA 90 bp GGCCTCCATCGTACGCTCAACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGGCTCCACTTTGGGGATaGAGGTGCGCACATGGTGCT +
Preference number: 4 (lower is better)
Translates to: GLHRTLNAAAVRSSRCQEAPLWG*RCAHGA
Trigger: AGCACCATGTGCGCACCTGCATCCCCAAAGTGGAGC...CTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTTGAGCGTACGATGGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR GCA 90 bp GAGGTAGGCCTCCATCGTACGCTCAACGCGGCAGCTGTGCGTAGTTCTCGCTGCAGCAGCAGTGGGTGTTaGGCAGGTCCTCCGAGCTCA +
Preference number: 4 (lower is better)
Translates to: EVGLHRTLNAAAVRSSRCSSSGC*AGPPSS
Trigger: TGAGCTCGGAGGACCTGCGCAACACCCACTGCTGCT...GCAGCGAGAACTACGCACAGCTGCCGCGTTGAGCGTACGATGGAGGCCTACCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR GCA 90 bp CTGGTTCTTCCGGGCCACCTTGGTGTGCTGTGGGCTGGTCCCCGAAGGAAACCCTGGTTCGGGCCACTGTaGGCTGGACAAAGAGGGGTA +
Preference number: 4 (lower is better)
Translates to: LVLPGHLGVLWAGPRRKPWFGPL*AGQRGV
Trigger: TACCCCTCTTTGTCCAGCGCACAGTGGCCCGAACCA...GGGTTTCCTTCGGGGACCAGCCCACAGCACACCAAGGTGGCCCGGAAGAACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR GCA 90 bp GAAGGAGACCACTGCATGAATCCCGTGCTATGCGCACCGGGGCACTCCCCGCCATGGTTCGGGCCACTGTaGGCTGGACAAAGAGGGGTA +
Preference number: 4 (lower is better)
Translates to: EGDHCMNPVLCAPGHSPPWFGPL*AGQRGV
Trigger: TACCCCTCTTTGTCCAGCGCACAGTGGCCCGAACCA...TGGCGGGGAGTGCCCCGGTGCGCATAGCACGGGATTCATGCAGTGGTCTCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS-3UTR GCA 90 bp GGCCTCCATCGTACGCTCAACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGTGGTTCGGGCCACTGTaGGCTGGACAAAGAGGGGTA +
Preference number: 4 (lower is better)
Translates to: GLHRTLNAAAVRSSRCQEWFGPL*AGQRGV
Trigger: TACCCCTCTTTGTCCAGCGCACAGTGGCCCGAACCA...CTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTTGAGCGTACGATGGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR GCA 90 bp GCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCCGTGTGGAGAGAGGGAGCAGCCAGGCCCAGGTCTaGTATGGCACACATGCCATT +
Preference number: 4 (lower is better)
Translates to: AAAVRSSRCQELRVERGSSQAQV*YGTHAI
Trigger: AATGGCATGTGTGCCATAGCAGACCTGGGCCTGGCT...GCTCCCTCTCTCCACACGGAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR GCA 90 bp GGCTGCACTTCTGGTTCTTCCGGGCCACCTTGGTGTGCTGTGGGCTGGTCCCCGAGCCAGGCCCAGGTCTaGTATGGCACACATGCCATT +
Preference number: 4 (lower is better)
Translates to: GCTSGSSGPPWCAVGWSPSQAQV*YGTHAI
Trigger: AATGGCATGTGTGCCATAGCAGACCTGGGCCTGGCT...CGGGGACCAGCCCACAGCACACCAAGGTGGCCCGGAAGAACCAGAAGTGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR GCA 90 bp CAGAGGGCTGGGCAGAAACGAGAGGTAGGCCTCCATCGTACGCTCAACGCGGCAGTGCGTAGTTCTCGCTaGCAGGAGCTCCGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: QRAGQKREVGLHRTLNAAVRSSR*QELRVE
Trigger: CTCCACACGGAGCTCCTGGCAGCGAGAACTACGCAC...TGCCGCGTTGAGCGTACGATGGAGGCCTACCTCTCGTTTCTGCCCAGCCCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR GCA 90 bp CTCCATCGTACGCTCAACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCTCAACGCGGCAGCTGTaGGTAGTTCTCGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: LHRTLNAAAVRSSRCQELSTRQL*VVLAAR
Trigger: CCTGGCAGCGAGAACTACGCACAGCTGCCGCGTTGA...GAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTTGAGCGTACGATGGAG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR GCA 90 bp GGGCAGAAACGAGAGGTAGGCCTCCATCGTACGCTCAACGCGGCAGCTGTGCGTTCAACGCGGCAGCTGTaGGTAGTTCTCGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: GQKREVGLHRTLNAAAVRSTRQL*VVLAAR
Trigger: CCTGGCAGCGAGAACTACGCACAGCTGCCGCGTTGA...ACGCACAGCTGCCGCGTTGAGCGTACGATGGAGGCCTACCTCTCGTTTCTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR GCA 90 bp CCCGAAGGAAACCCTCAGGGCAGCTTAGCACTGGCAACACCTCGGTTCCTCCGGTCAACGCGGCAGCTGTaGGTAGTTCTCGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: PEGNPQGSLALATPRFLRSTRQL*VVLAAR
Trigger: CCTGGCAGCGAGAACTACGCACAGCTGCCGCGTTGA...CCGGAGGAACCGAGGTGTTGCCAGTGCTAAGCTGCCCTGAGGGTTTCCTTCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR GCA 90 bp CACTCACACGCACGTGTAAGGGCATGGCACGAACCAGGCACAACGGGGGACGCAACGCACCTCGGCACATaGACACACGGCTGGACAGAC +
Preference number: 4 (lower is better)
Translates to: HSHARVRAWHEPGTTGDATHLGT*THGWTD
Trigger: GTCTGTCCAGCCGTGTGTGCATGTGCCGAGGTGCGT...TGCGTCCCCCGTTGTGCCTGGTTCGTGCCATGCCCTTACACGTGCGTGTGAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR GCA 90 bp AGCACTGGCAACACCTCGGTTCCTCCGGCCCCTCCCAAGCGCCCCTGTCATGGCGCTCAAGCAGGTAAGTaGGCACCTACAGACACACAC +
Preference number: 4 (lower is better)
Translates to: STGNTSVPPAPPKRPCHGAQAGK*APTDTH
Trigger: GTGTGTGTCTGTAGGTGCGCACTTACCTGCTTGAGC...GCCATGACAGGGGCGCTTGGGAGGGGCCGGAGGAACCGAGGTGTTGCCAGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR GCA 90 bp AACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCCGTGTGGAGAGAGGGCCCCCGACCTGCACATaGACAGAAAGCTCAAGCAGG +
Preference number: 4 (lower is better)
Translates to: NAAAVRSSRCQELRVERGPPTCT*TESSSR
Trigger: CCTGCTTGAGCTTTCTGTGCATGTGCAGGTCGGGGG...CCCTCTCTCCACACGGAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR GCA 90 bp GGCACATGCACACACGGCTGGACAGACAAAGCGGCAGATTCCGTCTCCACTGGCCCTGGAGGCAGCTGGTaGACGCACACAGCAGAGCAC +
Preference number: 4 (lower is better)
Translates to: GTCTHGWTDKAADSVSTGPGGSW*THTAEH
Trigger: GTGCTCTGCTGTGTGCGTGCACCAGCTGCCTCCAGG...GCCAGTGGAGACGGAATCTGCCGCTTTGTCTGTCCAGCCGTGTGTGCATGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542485.1
CDS-3UTR CCA 90 bp GGCCTCCATCGTACGCTCAACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGTCTCACACGTGTAGTTaGCCTGGAGGCAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: GLHRTLNAAAVRSSRCQESHTCS*PGGSWC
Trigger: GCACCAGCTGCCTCCAGGCCAACTACACGTGTGAGA...CTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTTGAGCGTACGATGGAGGCC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR CCA 90 bp CCTGTCATGGCTCCTGGCCACGTGCCAGATGCACCGGGTTTCGCGGGACTTCCCATGCAGGTGCGCACATaGTGCTCCATCCCATCCAGA +
Preference number: 4 (lower is better)
Translates to: PVMAPGHVPDAPGFAGLPMQVRT*CSIPSR
Trigger: TCTGGATGGGATGGAGCACCATGTGCGCACCTGCAT...GGGAAGTCCCGCGAAACCCGGTGCATCTGGCACGTGGCCAGGAGCCATGACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR CCA 90 bp CGTACGCTCAACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCCGTGTGGGACCAGCTCCACTTTaGGGATGCAGGTGCGCACAT +
Preference number: 4 (lower is better)
Translates to: RTLNAAAVRSSRCQELRVGPAPL*GCRCAH
Trigger: ATGTGCGCACCTGCATCCCCAAAGTGGAGCTGGTCC...CACACGGAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTTGAGCGTACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR CCA 90 bp GCCTCAGGGCAAAGAGGAACTCTCACTGCTGAGTGGGAACAGGCTCAGGTGCAACCACCGGGCCCCACATaGACGGGTGCTCAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: ASGQRGTLTAEWEQAQVQPPGPT*TGAQAP
Trigger: AGGAGCCTGAGCACCCGTCCATGTGGGGCCCGGTGG...TTGCACCTGAGCCTGTTCCCACTCAGCAGTGAGAGTTCCTCTTTGCCCTGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR CCA 90 bp CTGGACAGACAAAGCGGCAGATTCCGTCTCCACTGGCAGTCTCCCGGCAGCGTCCTGGCCACAGAGGGCTaGGCAGAAACGAGAGGTAGG +
Preference number: 4 (lower is better)
Translates to: LDRQSGRFRLHWQSPGSVLATEG*AETRGR
Trigger: CCTACCTCTCGTTTCTGCCCAGCCCTCTGTGGCCAG...GACGCTGCCGGGAGACTGCCAGTGGAGACGGAATCTGCCGCTTTGTCTGTCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR CCA 90 bp GACAAAGCGGCAGATTCCGTCTCCACTGGCAGTCTCCCGGCAGCGTCCATCCCAGAGGGGCTGCACTTCTaGTTCTTCCGGGCCACCTTG +
Preference number: 4 (lower is better)
Translates to: DKAADSVSTGSLPAASIPEGLHF*FFRATL
Trigger: CAAGGTGGCCCGGAAGAACCAGAAGTGCAGCCCCTC...TGGGATGGACGCTGCCGGGAGACTGCCAGTGGAGACGGAATCTGCCGCTTTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR CCA 90 bp CTGGACAGACAAAGCGGCAGATTCCGTCTCCACTGGCAGTCTCCCGGCAGCGTCAGATTCCGTCTCCACTaGCAGTCTCCCGGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: LDRQSGRFRLHWQSPGSVRFRLH*QSPGSV
Trigger: GACGCTGCCGGGAGACTGCCAGTGGAGACGGAATCT...GACGCTGCCGGGAGACTGCCAGTGGAGACGGAATCTGCCGCTTTGTCTGTCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR CCA 90 bp CTCAACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCCGTGTGGAGAGAAGATTCCGTCTCCACTaGCAGTCTCCCGGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: LNAAAVRSSRCQELRVERRFRLH*QSPGSV
Trigger: GACGCTGCCGGGAGACTGCCAGTGGAGACGGAATCT...TCTCTCCACACGGAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR CCA 90 bp AACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCCGTGTGGAGAGAGGGGCACGTGTAAGGGCATaGCACGAACCAGGCACAACG +
Preference number: 4 (lower is better)
Translates to: NAAAVRSSRCQELRVERGARVRA*HEPGTT
Trigger: CGTTGTGCCTGGTTCGTGCCATGCCCTTACACGTGC...CCCTCTCTCCACACGGAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR CCA 90 bp GGTCCCCGAAGGAAACCCTCAGGGCAGCTTAGCACTGGCAACACCTCGGTTCCTTGGCATGAGGGGCTCTaGGGGAGGGAGAGACCTCCA +
Preference number: 4 (lower is better)
Translates to: GPRRKPSGQLSTGNTSVPWHEGL*GRERPP
Trigger: TGGAGGTCTCTCCCTCCCCCAGAGCCCCTCATGCCA...AGGAACCGAGGTGTTGCCAGTGCTAAGCTGCCCTGAGGGTTTCCTTCGGGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR CCA 90 bp GCTGGACAGACAAAGCGGCAGATTCCGTCTCCACTGGCAGTCTCCCGGCAGCGTCACAGAGTACCACTGTaGCATGAGGGGCTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: AGQTKRQIPSPLAVSRQRHRVPL*HEGLWG
Trigger: CCCCCAGAGCCCCTCATGCCACAGTGGTACTCTGTG...ACGCTGCCGGGAGACTGCCAGTGGAGACGGAATCTGCCGCTTTGTCTGTCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR CCA 90 bp CTGGACAGACAAAGCGGCAGATTCCGTCTCCACTGGCAGTCTCCCGGCAGCGTCCTCATCACCCGCCCCTaGTCTCTTTGTGGAGGGGGT +
Preference number: 4 (lower is better)
Translates to: LDRQSGRFRLHWQSPGSVLITRP*SLCGGG
Trigger: ACCCCCTCCACAAAGAGACCAGGGGCGGGTGATGAG...GACGCTGCCGGGAGACTGCCAGTGGAGACGGAATCTGCCGCTTTGTCTGTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR CCA 90 bp AACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCCGTGTGGAGAGAGGGTGCAGGGCGGATAGGTaGGAGGTCAGCAGGGGTAAA +
Preference number: 4 (lower is better)
Translates to: NAAAVRSSRCQELRVERGCRADR*EVSRGK
Trigger: TTTACCCCTGCTGACCTCCCACCTATCCGCCCTGCA...CCCTCTCTCCACACGGAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257963.9
3UTR CAA 72 bp AGGGCAGAAGGGCCAACTGGGGAGTGGGCTAGTGGCTaGGGAGTGGACGTGTGTTGGCAGATCCCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: RAEGPTGEWASG*GVDVCWQIPEA
Trigger: AGCCTCTGGGATCTGCCAACACACGTCCACTCCCAAGCCACTAGCCCACTCCCCAGTTGGCCCTTCTGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR TCA 90 bp AGCACTGGCAACACCTCGGTTCCTCCGGCCCCTCCCAAGCGCCCCTGTCATGGCTGTCAATGGTGTCAGTaGCTGCATCATGACGGACAG +
Preference number: 4 (lower is better)
Translates to: STGNTSVPPAPPKRPCHGCQWCQ*LHHDGQ
Trigger: CTGTCCGTCATGATGCAGTCACTGACACCATTGACA...GCCATGACAGGGGCGCTTGGGAGGGGCCGGAGGAACCGAGGTGTTGCCAGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR TCA 90 bp GGAGACCACTGCATGAATCCCGTGCTATGCGCACCGGGGCACTCCCCGCCACGGGGCAACCTTAAACGATaGTTCAGGCTCTGGCAACAG +
Preference number: 4 (lower is better)
Translates to: GDHCMNPVLCAPGHSPPRGNLKR*FRLWQQ
Trigger: CTGTTGCCAGAGCCTGAATCATCGTTTAAGGTTGCC...CCGTGGCGGGGAGTGCCCCGGTGCGCATAGCACGGGATTCATGCAGTGGTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS-3UTR GCA 90 bp AGGGCTGGGCAGAAACGAGAGGTAGGCCTCCATCGTACGCTCAACGCGGCAGCTTGGTTCGGGCCACTGTaGGCTGGACAAAGAGGGGTA +
Preference number: 4 (lower is better)
Translates to: RAGQKREVGLHRTLNAAAWFGPL*AGQRGV
Trigger: TACCCCTCTTTGTCCAGCGCACAGTGGCCCGAACCA...AGCTGCCGCGTTGAGCGTACGATGGAGGCCTACCTCTCGTTTCTGCCCAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR GCA 90 bp AGCGCCCCTGTCATGGCTCCTGGCCACGTGCCAGATGCACCGGGTTTCGCGGGACGTCTGGTATATCTCTaGTTCCCTGAACCAAGACCG +
Preference number: 4 (lower is better)
Translates to: SAPVMAPGHVPDAPGFAGRLVYL*FPEPRP
Trigger: CGGTCTTGGTTCAGGGAAGCAGAGATATACCAGACG...TCCCGCGAAACCCGGTGCATCTGGCACGTGGCCAGGAGCCATGACAGGGGCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR GCA 90 bp CTCCATCGTACGCTCAACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCCTCCATGTGCAGGTGTaGCAGCCCACTAGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: LHRTLNAAAVRSSRCQELLHVQV*QPTSSR
Trigger: TCTGCTGCTAGTGGGCTGGCACACCTGCACATGGAG...GAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTTGAGCGTACGATGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR GCA 90 bp CACGTGCCAGATGCACCGGGTTTCGCGGGACTTCCCACTACAACCAGTTCGAGGACGCACCTCGGCACATaGACACACGGCTGGACAGAC +
Preference number: 4 (lower is better)
Translates to: HVPDAPGFAGLPTTTSSRTHLGT*THGWTD
Trigger: GTCTGTCCAGCCGTGTGTGCATGTGCCGAGGTGCGT...CCTCGAACTGGTTGTAGTGGGAAGTCCCGCGAAACCCGGTGCATCTGGCACGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR GCA 90 bp CAGAGGGCTGGGCAGAAACGAGAGGTAGGCCTCCATCGTACGCTCAACGCGGCAAAACCGCCAAGGTTCTaGTGCAGGGCGGATAGGTGG +
Preference number: 4 (lower is better)
Translates to: QRAGQKREVGLHRTLNAAKPPRF*CRADRW
Trigger: CCACCTATCCGCCCTGCAGCAGAACCTTGGCGGTTT...TGCCGCGTTGAGCGTACGATGGAGGCCTACCTCTCGTTTCTGCCCAGCCCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR CCA 90 bp ACAGAGGGCTGGGCAGAAACGAGAGGTAGGCCTCCATCGTACGCTCAACGCGGCTCTCACACGTGTAGTTaGCCTGGAGGCAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: TEGWAETRGRPPSYAQRGSHTCS*PGGSWC
Trigger: GCACCAGCTGCCTCCAGGCCAACTACACGTGTGAGA...GCCGCGTTGAGCGTACGATGGAGGCCTACCTCTCGTTTCTGCCCAGCCCTCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR CCA 90 bp CCACAGAGGGCTGGGCAGAAACGAGAGGTAGGCCTCCATCGTACGCTCAACGCGTCTCACACGTGTAGTTaGCCTGGAGGCAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: PQRAGQKREVGLHRTLNASHTCS*PGGSWC
Trigger: GCACCAGCTGCCTCCAGGCCAACTACACGTGTGAGA...CGCGTTGAGCGTACGATGGAGGCCTACCTCTCGTTTCTGCCCAGCCCTCTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR CCA 90 bp AACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCCGTGTGGAGAGAGGGATGCAGGTGCGCACATaGTGCTCCATCCCATCCAGA +
Preference number: 4 (lower is better)
Translates to: NAAAVRSSRCQELRVERGMQVRT*CSIPSR
Trigger: TCTGGATGGGATGGAGCACCATGTGCGCACCTGCAT...CCCTCTCTCCACACGGAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR CCA 90 bp AGCACTGGCAACACCTCGGTTCCTCCGGCCCCTCCCAAGCGCCCCTGTCATGGCTCTCTTGTAAAACGATaGTTCGGGCCACTGTGCGCT +
Preference number: 4 (lower is better)
Translates to: STGNTSVPPAPPKRPCHGSLVKR*FGPLCA
Trigger: AGCGCACAGTGGCCCGAACCATCGTTTTACAAGAGA...GCCATGACAGGGGCGCTTGGGAGGGGCCGGAGGAACCGAGGTGTTGCCAGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR CCA 90 bp GAAGGAGACCACTGCATGAATCCCGTGCTATGCGCACCGGGGCACTCCCCGCCAATTCCAGGCTTCCCTTaGGTGCCCACGATCTCCATG +
Preference number: 4 (lower is better)
Translates to: EGDHCMNPVLCAPGHSPPIPGFP*VPTISM
Trigger: CATGGAGATCGTGGGCACCCAAGGGAAGCCTGGAAT...TGGCGGGGAGTGCCCCGGTGCGCATAGCACGGGATTCATGCAGTGGTCTCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS-3UTR CCA 90 bp AACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCCGTGTGGAGAGAGGGATTCCAGGCTTCCCTTaGGTGCCCACGATCTCCATG +
Preference number: 4 (lower is better)
Translates to: NAAAVRSSRCQELRVERGIPGFP*VPTISM
Trigger: CATGGAGATCGTGGGCACCCAAGGGAAGCCTGGAAT...CCCTCTCTCCACACGGAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR CCA 90 bp GAAGGAGACCACTGCATGAATCCCGTGCTATGCGCACCGGGGCACTCCCCGCCAGGGCCATGTATCGTTTaGTCCCCACCCTCTGATTCG +
Preference number: 4 (lower is better)
Translates to: EGDHCMNPVLCAPGHSPPGPCIV*SPPSDS
Trigger: CGAATCAGAGGGTGGGGACCAAACGATACATGGCCC...TGGCGGGGAGTGCCCCGGTGCGCATAGCACGGGATTCATGCAGTGGTCTCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS-3UTR CCA 90 bp GGCTGCACTTCTGGTTCTTCCGGGCCACCTTGGTGTGCTGTGGGCTGGTCCCCGACCAGTTGGGGATGTTaGGACGCAGCTTCTGATCAC +
Preference number: 4 (lower is better)
Translates to: GCTSGSSGPPWCAVGWSPTSWGC*DAASDH
Trigger: GTGATCAGAAGCTGCGTCCCAACATCCCCAACTGGT...CGGGGACCAGCCCACAGCACACCAAGGTGGCCCGGAAGAACCAGAAGTGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR CCA 90 bp GGCCTCCATCGTACGCTCAACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGAACTCTGCCACCAGTTaGGGATGTTGGGACGCAGCT +
Preference number: 4 (lower is better)
Translates to: GLHRTLNAAAVRSSRCQENSATS*GCWDAA
Trigger: AGCTGCGTCCCAACATCCCCAACTGGTGGCAGAGTT...CTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTTGAGCGTACGATGGAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR CCA 90 bp CAGAAACGAGAGGTAGGCCTCCATCGTACGCTCAACGCGGCAGCTGTGCGTAGTTCTTCCGGGCCACCTTaGTGTGCTGTGGGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: QKREVGLHRTLNAAAVRSSSGPP*CAVGWS
Trigger: GGACCAGCCCACAGCACACCAAGGTGGCCCGGAAGA...ACTACGCACAGCTGCCGCGTTGAGCGTACGATGGAGGCCTACCTCTCGTTTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR CCA 90 bp GGCTGCACTTCTGGTTCTTCCGGGCCACCTTGGTGTGCTGTGGGCTGGTCCCCGACATGCACACACGGCTaGACAGACAAAGCGGCAGAT +
Preference number: 4 (lower is better)
Translates to: GCTSGSSGPPWCAVGWSPTCTHG*TDKAAD
Trigger: ATCTGCCGCTTTGTCTGTCCAGCCGTGTGTGCATGT...CGGGGACCAGCCCACAGCACACCAAGGTGGCCCGGAAGAACCAGAAGTGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR CCA 90 bp AGGGCTGGGCAGAAACGAGAGGTAGGCCTCCATCGTACGCTCAACGCGGCAGCTGCACGTGTAAGGGCATaGCACGAACCAGGCACAACG +
Preference number: 4 (lower is better)
Translates to: RAGQKREVGLHRTLNAAAARVRA*HEPGTT
Trigger: CGTTGTGCCTGGTTCGTGCCATGCCCTTACACGTGC...AGCTGCCGCGTTGAGCGTACGATGGAGGCCTACCTCTCGTTTCTGCCCAGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR CCA 90 bp TTAGCACTGGCAACACCTCGGTTCCTCCGGCCCCTCCCAAGCGCCCCTGTCATGGAGGGTACAACCAGCTaGACAGTGCAAGAAAGGGCC +
Preference number: 4 (lower is better)
Translates to: LALATPRFLRPLPSAPVMEGTTS*TVQERA
Trigger: GGCCCTTTCTTGCACTGTCCAGCTGGTTGTACCCTC...CATGACAGGGGCGCTTGGGAGGGGCCGGAGGAACCGAGGTGTTGCCAGTGCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR CCA 90 bp CACTCACACGCACGTGTAAGGGCATGGCACGAACCAGGCACAACGGGGGACGCAAGTGGGCTAGTGGCTTaGGAGTGGACGTGTGTTGGC +
Preference number: 4 (lower is better)
Translates to: HSHARVRAWHEPGTTGDASGLVA*EWTCVG
Trigger: GCCAACACACGTCCACTCCCAAGCCACTAGCCCACT...TGCGTCCCCCGTTGTGCCTGGTTCGTGCCATGCCCTTACACGTGCGTGTGAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR TCA 90 bp GGAGACCACTGCATGAATCCCGTGCTATGCGCACCGGGGCACTCCCCGCCACGGCCATCCCATCCAGATTaGAAATGGAAACCATGCAGG +
Preference number: 4 (lower is better)
Translates to: GDHCMNPVLCAPGHSPPRPSHPD*KWKPCR
Trigger: CCTGCATGGTTTCCATTTTCAATCTGGATGGGATGG...CCGTGGCGGGGAGTGCCCCGGTGCGCATAGCACGGGATTCATGCAGTGGTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS-3UTR TCA 90 bp CCACAGAGGGCTGGGCAGAAACGAGAGGTAGGCCTCCATCGTACGCTCAACGCGTTGGTCCCCACCCTCTaGTTCGGGGCAATGTCAATG +
Preference number: 4 (lower is better)
Translates to: PQRAGQKREVGLHRTLNALVPTL*FGAMSM
Trigger: CATTGACATTGCCCCGAATCAGAGGGTGGGGACCAA...CGCGTTGAGCGTACGATGGAGGCCTACCTCTCGTTTCTGCCCAGCCCTCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR TCA 90 bp CAGAGGGCTGGGCAGAAACGAGAGGTAGGCCTCCATCGTACGCTCAACGCGGCATTGGTCCCCACCCTCTaGTTCGGGGCAATGTCAATG +
Preference number: 4 (lower is better)
Translates to: QRAGQKREVGLHRTLNAALVPTL*FGAMSM
Trigger: CATTGACATTGCCCCGAATCAGAGGGTGGGGACCAA...TGCCGCGTTGAGCGTACGATGGAGGCCTACCTCTCGTTTCTGCCCAGCCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR TCA 90 bp CTGTCATGGCTCCTGGCCACGTGCCAGATGCACCGGGTTTCGCGGGACTTCCCATTTGGTTCCACAGTCTaGGATGGAGGAGGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: LSWLLATCQMHRVSRDFPFGSTV*DGGGEL
Trigger: CAGCTCTCCTCCTCCATCTCAGACTGTGGAACCAAA...TGGGAAGTCCCGCGAAACCCGGTGCATCTGGCACGTGGCCAGGAGCCATGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR TCA 90 bp GCTGGACAGACAAAGCGGCAGATTCCGTCTCCACTGGCAGTCTCCCGGCAGCGTAGGAACTCTCACTGCTaGGTGGGAACAGGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: AGQTKRQIPSPLAVSRQRRNSHC*VGTGSG
Trigger: ACCTGAGCCTGTTCCCACTCAGCAGTGAGAGTTCCT...ACGCTGCCGGGAGACTGCCAGTGGAGACGGAATCTGCCGCTTTGTCTGTCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR GCA 90 bp TCTCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTGCCCGGACCCGCCGCTaGCGGCGAGCAGGAGGACAA +
Preference number: 4 (lower is better)
Translates to: SPHIAQVCLELLSSSYLPARTRR*RRAGGQ
Trigger: TTGTCCTCCTGCTCGCCGGCAGCGGCGGGTCCGGGC...AGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426655.6
CDS-3UTR GCA 90 bp GCCTGTGAGAGGGGCTGCACTTCTGGTTCTTCCGGGCCACCTTGGTGTGCTGTGCAGGTGCGCACATGGTaGTCCATCCCATCCAGATTG +
Preference number: 4 (lower is better)
Translates to: ACERGCTSGSSGPPWCAVQVRTW*SIPSRL
Trigger: CAATCTGGATGGGATGGAGCACCATGTGCGCACCTG...CACAGCACACCAAGGTGGCCCGGAAGAACCAGAAGTGCAGCCCCTCTCACAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR GCA 90 bp AGGAGACCACTGCATGAATCCCGTGCTATGCGCACCGGGGCACTCCCCGCCACGCGTCTGGTATATCTCTaGTTCCCTGAACCAAGACCG +
Preference number: 4 (lower is better)
Translates to: RRPLHESRAMRTGALPATRLVYL*FPEPRP
Trigger: CGGTCTTGGTTCAGGGAAGCAGAGATATACCAGACG...CGTGGCGGGGAGTGCCCCGGTGCGCATAGCACGGGATTCATGCAGTGGTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS-3UTR GCA 90 bp CTCAACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCCGTGTGGAGAGAAGCCAGGCCCAGGTCTaGTATGGCACACATGCCATT +
Preference number: 4 (lower is better)
Translates to: LNAAAVRSSRCQELRVERSQAQV*YGTHAI
Trigger: AATGGCATGTGTGCCATAGCAGACCTGGGCCTGGCT...TCTCTCCACACGGAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR GCA 90 bp GCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCCGTGTGGAGAGAGGGAGCAATGGTGTCAGTGACTaGATCATGACGGACAGCCAG +
Preference number: 4 (lower is better)
Translates to: AAAVRSSRCQELRVERGSNGVSD*IMTDSQ
Trigger: CTGGCTGTCCGTCATGATGCAGTCACTGACACCATT...GCTCCCTCTCTCCACACGGAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR GCA 90 bp CCACAGAGGGCTGGGCAGAAACGAGAGGTAGGCCTCCATCGTACGCTCAACGCGATCTTCACGTCTTCCTaGACGCTGAGCTGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: PQRAGQKREVGLHRTLNAIFTSS*TLSWER
Trigger: CCTCTCCCAGCTCAGCGTGCAGGAAGACGTGAAGAT...CGCGTTGAGCGTACGATGGAGGCCTACCTCTCGTTTCTGCCCAGCCCTCTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR GCA 90 bp AGGAGGGGAAAGCGCGGCTCAGAGCTGCCTGTGAGAGGGGCTGCACTTCTGGTTATCTTCACGTCTTCCTaGACGCTGAGCTGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: RRGKRGSELPVRGAALLVIFTSS*TLSWER
Trigger: CCTCTCCCAGCTCAGCGTGCAGGAAGACGTGAAGAT...AACCAGAAGTGCAGCCCCTCTCACAGGCAGCTCTGAGCCGCGCTTTCCCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR GCA 90 bp TCGGCACATGCACACACGGCTGGACAGACAAAGCGGCAGATTCCGTCTCCACTGGCCTGTGAGAGGGGCTaGACTTCTGGTTCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: SAHAHTAGQTKRQIPSPLACERG*TSGSSG
Trigger: CCCGGAAGAACCAGAAGTGCAGCCCCTCTCACAGGC...CAGTGGAGACGGAATCTGCCGCTTTGTCTGTCCAGCCGTGTGTGCATGTGCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR GCA 90 bp CGAGAGGTAGGCCTCCATCGTACGCTCAACGCGGCAGCTGTGCGTAGTTCTCGCGTGGGCAGAGTAGCCTaGCAGACACAGAGTACCACT +
Preference number: 4 (lower is better)
Translates to: REVGLHRTLNAAAVRSSRVGRVA*QTQSTT
Trigger: AGTGGTACTCTGTGTCTGGCAGGCTACTCTGCCCAC...GCGAGAACTACGCACAGCTGCCGCGTTGAGCGTACGATGGAGGCCTACCTCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR CCA 90 bp CAGAAACGAGAGGTAGGCCTCCATCGTACGCTCAACGCGGCAGCTGTGCGTAGTCGGGCCACTGTGCGCTaGACAAAGAGGGGTAACCCT +
Preference number: 4 (lower is better)
Translates to: QKREVGLHRTLNAAAVRSRATVR*TKRGNP
Trigger: AGGGTTACCCCTCTTTGTCCAGCGCACAGTGGCCCG...ACTACGCACAGCTGCCGCGTTGAGCGTACGATGGAGGCCTACCTCTCGTTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR CCA 90 bp CATGCACACACGGCTGGACAGACAAAGCGGCAGATTCCGTCTCCACTGGCAGTCCGGGCCACTGTGCGCTaGACAAAGAGGGGTAACCCT +
Preference number: 4 (lower is better)
Translates to: HAHTAGQTKRQIPSPLAVRATVR*TKRGNP
Trigger: AGGGTTACCCCTCTTTGTCCAGCGCACAGTGGCCCG...GACTGCCAGTGGAGACGGAATCTGCCGCTTTGTCTGTCCAGCCGTGTGTGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR CCA 90 bp CCTGTCATGGCTCCTGGCCACGTGCCAGATGCACCGGGTTTCGCGGGACTTCCCGGCCCAGGTCTGCTATaGCACACATGCCATTTTTCT +
Preference number: 4 (lower is better)
Translates to: PVMAPGHVPDAPGFAGLPGPGLL*HTCHFS
Trigger: AGAAAAATGGCATGTGTGCCATAGCAGACCTGGGCC...GGGAAGTCCCGCGAAACCCGGTGCATCTGGCACGTGGCCAGGAGCCATGACAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR CCA 90 bp GCTGGACAGACAAAGCGGCAGATTCCGTCTCCACTGGCAGTCTCCCGGCAGCGTGGGCCATGTATCGTTTaGTCCCCACCCTCTGATTCG +
Preference number: 4 (lower is better)
Translates to: AGQTKRQIPSPLAVSRQRGPCIV*SPPSDS
Trigger: CGAATCAGAGGGTGGGGACCAAACGATACATGGCCC...ACGCTGCCGGGAGACTGCCAGTGGAGACGGAATCTGCCGCTTTGTCTGTCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR CCA 90 bp CGAGAGGTAGGCCTCCATCGTACGCTCAACGCGGCAGCTGTGCGTAGTTCTCGCGGGCCATGTATCGTTTaGTCCCCACCCTCTGATTCG +
Preference number: 4 (lower is better)
Translates to: REVGLHRTLNAAAVRSSRGPCIV*SPPSDS
Trigger: CGAATCAGAGGGTGGGGACCAAACGATACATGGCCC...GCGAGAACTACGCACAGCTGCCGCGTTGAGCGTACGATGGAGGCCTACCTCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR CCA 90 bp TCAACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCCGTGTGGAGAGAGGGGCCATGTATCGTTTaGTCCCCACCCTCTGATTCG +
Preference number: 4 (lower is better)
Translates to: STRQLCVVLAARSSVWREGPCIV*SPPSDS
Trigger: CGAATCAGAGGGTGGGGACCAAACGATACATGGCCC...CTCTCTCCACACGGAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR CCA 90 bp GCCTGTGAGAGGGGCTGCACTTCTGGTTCTTCCGGGCCACCTTGGTGTGCTGTGAACTCTGCCACCAGTTaGGGATGTTGGGACGCAGCT +
Preference number: 4 (lower is better)
Translates to: ACERGCTSGSSGPPWCAVNSATS*GCWDAA
Trigger: AGCTGCGTCCCAACATCCCCAACTGGTGGCAGAGTT...CACAGCACACCAAGGTGGCCCGGAAGAACCAGAAGTGCAGCCCCTCTCACAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR CCA 90 bp CTCCATCGTACGCTCAACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCAACTCTGCCACCAGTTaGGGATGTTGGGACGCAGCT +
Preference number: 4 (lower is better)
Translates to: LHRTLNAAAVRSSRCQELNSATS*GCWDAA
Trigger: AGCTGCGTCCCAACATCCCCAACTGGTGGCAGAGTT...GAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTTGAGCGTACGATGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR CCA 90 bp CAGAAACGAGAGGTAGGCCTCCATCGTACGCTCAACGCGGCAGCTGTGCGTAGTCTGGCCACAGAGGGCTaGGCAGAAACGAGAGGTAGG +
Preference number: 4 (lower is better)
Translates to: QKREVGLHRTLNAAAVRSLATEG*AETRGR
Trigger: CCTACCTCTCGTTTCTGCCCAGCCCTCTGTGGCCAG...ACTACGCACAGCTGCCGCGTTGAGCGTACGATGGAGGCCTACCTCTCGTTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR CCA 90 bp CTGTCATGGCTCCTGGCCACGTGCCAGATGCACCGGGTTTCGCGGGACTTCCCATTGGCAGAGAACTGCTaGGTTGGAGGCAGAGATGCT +
Preference number: 4 (lower is better)
Translates to: LSWLLATCQMHRVSRDFPLAENC*VGGRDA
Trigger: AGCATCTCTGCCTCCAACCCAGCAGTTCTCTGCCAA...TGGGAAGTCCCGCGAAACCCGGTGCATCTGGCACGTGGCCAGGAGCCATGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR CCA 90 bp ACACGCACGTGTAAGGGCATGGCACGAACCAGGCACAACGGGGGACGCACCTCGCTCCTCCACAAGCTTTaGCAGAGAACTGCTGGGTTG +
Preference number: 4 (lower is better)
Translates to: TRTCKGMARTRHNGGRTSLLHKL*QRTAGL
Trigger: CAACCCAGCAGTTCTCTGCCAAAGCTTGTGGAGGAG...CGAGGTGCGTCCCCCGTTGTGCCTGGTTCGTGCCATGCCCTTACACGTGCGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR CCA 90 bp CACTCACACGCACGTGTAAGGGCATGGCACGAACCAGGCACAACGGGGGACGCAGTTCGGGGGCCTTTATaGCGACGTAAGAACGGGCTT +
Preference number: 4 (lower is better)
Translates to: HSHARVRAWHEPGTTGDAVRGPL*RRKNGL
Trigger: AAGCCCGTTCTTACGTCGCCATAAAGGCCCCCGAAC...TGCGTCCCCCGTTGTGCCTGGTTCGTGCCATGCCCTTACACGTGCGTGTGAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR TCA 90 bp CCTGTCATGGCTCCTGGCCACGTGCCAGATGCACCGGGTTTCGCGGGACTTCCCCCATCCCATCCAGATTaGAAATGGAAACCATGCAGG +
Preference number: 4 (lower is better)
Translates to: PVMAPGHVPDAPGFAGLPPSHPD*KWKPCR
Trigger: CCTGCATGGTTTCCATTTTCAATCTGGATGGGATGG...GGGAAGTCCCGCGAAACCCGGTGCATCTGGCACGTGGCCAGGAGCCATGACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR TCA 90 bp GTACGCTCAACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCCGTGTGGGAGACACATCTCACATaGGGGATCTTCCATGTCCAG +
Preference number: 4 (lower is better)
Translates to: VRSTRQLCVVLAARSSVWETHLT*GIFHVQ
Trigger: CTGGACATGGAAGATCCCTCATGTGAGATGTGTCTC...CCACACGGAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTTGAGCGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR TCA 90 bp AGGAGACCACTGCATGAATCCCGTGCTATGCGCACCGGGGCACTCCCCGCCACGATATCTCTGCTTCCCTaGACCAAGACCGTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: RRPLHESRAMRTGALPATISLLP*TKTVLH
Trigger: GTGAAGAACGGTCTTGGTTCAGGGAAGCAGAGATAT...CGTGGCGGGGAGTGCCCCGGTGCGCATAGCACGGGATTCATGCAGTGGTCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS-3UTR TCA 90 bp GAAGGAGACCACTGCATGAATCCCGTGCTATGCGCACCGGGGCACTCCCCGCCATGTCAATGGTGTCAGTaGCTGCATCATGACGGACAG +
Preference number: 4 (lower is better)
Translates to: EGDHCMNPVLCAPGHSPPCQWCQ*LHHDGQ
Trigger: CTGTCCGTCATGATGCAGTCACTGACACCATTGACA...TGGCGGGGAGTGCCCCGGTGCGCATAGCACGGGATTCATGCAGTGGTCTCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS-3UTR TCA 90 bp GGAGCTTCCCAAAGACCTGCTCCATCTTCCCCAGAGGTGGAAGAGTTGGACTGTCAAGCACGGACAGCATaGCGACCACACCCCCGACCT +
Preference number: 4 (lower is better)
Translates to: GASQRPAPSSPEVEELDCQARTA*RPHPRP
Trigger: AGGTCGGGGGTGTGGTCGTCATGCTGTCCGTGCTTG...ACAGTCCAACTCTTCCACCTCTGGGGAAGATGGAGCAGGTCTTTGGGAAGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR GCA 90 bp CGTACGCTCAACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCCGTGTGCGTCTGGTATATCTCTaGTTCCCTGAACCAAGACCG +
Preference number: 4 (lower is better)
Translates to: RTLNAAAVRSSRCQELRVRLVYL*FPEPRP
Trigger: CGGTCTTGGTTCAGGGAAGCAGAGATATACCAGACG...CACACGGAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTTGAGCGTACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR GCA 90 bp TTAGCACTGGCAACACCTCGGTTCCTCCGGCCCCTCCCAAGCGCCCCTGTCATGCGTCTGGTATATCTCTaGTTCCCTGAACCAAGACCG +
Preference number: 4 (lower is better)
Translates to: LALATPRFLRPLPSAPVMRLVYL*FPEPRP
Trigger: CGGTCTTGGTTCAGGGAAGCAGAGATATACCAGACG...CATGACAGGGGCGCTTGGGAGGGGCCGGAGGAACCGAGGTGTTGCCAGTGCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR GCA 90 bp GAAGGAGACCACTGCATGAATCCCGTGCTATGCGCACCGGGGCACTCCCCGCCAAATGGTGTCAGTGACTaGATCATGACGGACAGCCAG +
Preference number: 4 (lower is better)
Translates to: EGDHCMNPVLCAPGHSPPNGVSD*IMTDSQ
Trigger: CTGGCTGTCCGTCATGATGCAGTCACTGACACCATT...TGGCGGGGAGTGCCCCGGTGCGCATAGCACGGGATTCATGCAGTGGTCTCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS-3UTR GCA 90 bp AACCCTCAGGGCAGCTTAGCACTGGCAACACCTCGGTTCCTCCGGCCCCTCCCAGGACTCCTCCAGAATTaGATCTTCGAGCAATCTCCC +
Preference number: 4 (lower is better)
Translates to: NPQGSLALATPRFLRPLPGLLQN*IFEQSP
Trigger: GGGAGATTGCTCGAAGATGCAATTCTGGAGGAGTCC...TGGGAGGGGCCGGAGGAACCGAGGTGTTGCCAGTGCTAAGCTGCCCTGAGGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR GCA 90 bp AGGAGGGGAAAGCGCGGCTCAGAGCTGCCTGTGAGAGGGGCTGCACTTCTGGTTGCTCAAGCAGGTAAGTaGGCACCTACAGACACACAC +
Preference number: 4 (lower is better)
Translates to: RRGKRGSELPVRGAALLVAQAGK*APTDTH
Trigger: GTGTGTGTCTGTAGGTGCGCACTTACCTGCTTGAGC...AACCAGAAGTGCAGCCCCTCTCACAGGCAGCTCTGAGCCGCGCTTTCCCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR GCA 90 bp CCACAGAGGGCTGGGCAGAAACGAGAGGTAGGCCTCCATCGTACGCTCAACGCGAGCTTCCCAAAGACCTaGTCCATCTTCCCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: PQRAGQKREVGLHRTLNASFPKT*SIFPRG
Trigger: ACCTCTGGGGAAGATGGAGCAGGTCTTTGGGAAGCT...CGCGTTGAGCGTACGATGGAGGCCTACCTCTCGTTTCTGCCCAGCCCTCTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR CCA 90 bp CTGGTCCCCGAAGGAAACCCTCAGGGCAGCTTAGCACTGGCAACACCTCGGTTCATGCAGGTGCGCACATaGTGCTCCATCCCATCCAGA +
Preference number: 4 (lower is better)
Translates to: LVPEGNPQGSLALATPRFMQVRT*CSIPSR
Trigger: TCTGGATGGGATGGAGCACCATGTGCGCACCTGCAT...GAACCGAGGTGTTGCCAGTGCTAAGCTGCCCTGAGGGTTTCCTTCGGGGACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR CCA 90 bp GAAGGAGACCACTGCATGAATCCCGTGCTATGCGCACCGGGGCACTCCCCGCCATCTCTTGTAAAACGATaGTTCGGGCCACTGTGCGCT +
Preference number: 4 (lower is better)
Translates to: EGDHCMNPVLCAPGHSPPSLVKR*FGPLCA
Trigger: AGCGCACAGTGGCCCGAACCATCGTTTTACAAGAGA...TGGCGGGGAGTGCCCCGGTGCGCATAGCACGGGATTCATGCAGTGGTCTCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS-3UTR CCA 90 bp GGCACATGCACACACGGCTGGACAGACAAAGCGGCAGATTCCGTCTCCACTGGCATTCCAGGCTTCCCTTaGGTGCCCACGATCTCCATG +
Preference number: 4 (lower is better)
Translates to: GTCTHGWTDKAADSVSTGIPGFP*VPTISM
Trigger: CATGGAGATCGTGGGCACCCAAGGGAAGCCTGGAAT...GCCAGTGGAGACGGAATCTGCCGCTTTGTCTGTCCAGCCGTGTGTGCATGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR CCA 90 bp CGTACGCTCAACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCCGTGTGGGCCCAGGTCTGCTATaGCACACATGCCATTTTTCT +
Preference number: 4 (lower is better)
Translates to: RTLNAAAVRSSRCQELRVGPGLL*HTCHFS
Trigger: AGAAAAATGGCATGTGTGCCATAGCAGACCTGGGCC...CACACGGAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTTGAGCGTACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR CCA 90 bp CATCGTACGCTCAACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCCGTACCAGTTGGGGATGTTaGGACGCAGCTTCTGATCAC +
Preference number: 4 (lower is better)
Translates to: HRTLNAAAVRSSRCQELRTSWGC*DAASDH
Trigger: GTGATCAGAAGCTGCGTCCCAACATCCCCAACTGGT...ACGGAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTTGAGCGTACGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR CCA 90 bp CTCCATCGTACGCTCAACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCACCAGTTGGGGATGTTaGGACGCAGCTTCTGATCAC +
Preference number: 4 (lower is better)
Translates to: LHRTLNAAAVRSSRCQELTSWGC*DAASDH
Trigger: GTGATCAGAAGCTGCGTCCCAACATCCCCAACTGGT...GAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTTGAGCGTACGATGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR CCA 90 bp CACTCACACGCACGTGTAAGGGCATGGCACGAACCAGGCACAACGGGGGACGCAACATGCACACACGGCTaGACAGACAAAGCGGCAGAT +
Preference number: 4 (lower is better)
Translates to: HSHARVRAWHEPGTTGDATCTHG*TDKAAD
Trigger: ATCTGCCGCTTTGTCTGTCCAGCCGTGTGTGCATGT...TGCGTCCCCCGTTGTGCCTGGTTCGTGCCATGCCCTTACACGTGCGTGTGAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR CCA 90 bp CTGCACTTCTGGTTCTTCCGGGCCACCTTGGTGTGCTGTGGGCTGGTCCCCGAACAACTGGGCCAGCTTTaGTTCCACAGTCTGAGATGG +
Preference number: 4 (lower is better)
Translates to: LHFWFFRATLVCCGLVPEQLGQL*FHSLRW
Trigger: CCATCTCAGACTGTGGAACCAAAGCTGGCCCAGTTG...TTCGGGGACCAGCCCACAGCACACCAAGGTGGCCCGGAAGAACCAGAAGTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR CCA 90 bp CAGAAACGAGAGGTAGGCCTCCATCGTACGCTCAACGCGGCAGCTGTGCGTAGTCTGAGTCCCGAGATCTaGCTTCACATTCCTCGGCCC +
Preference number: 4 (lower is better)
Translates to: QKREVGLHRTLNAAAVRSLSPEI*LHIPRP
Trigger: GGGCCGAGGAATGTGAAGCCAGATCTCGGGACTCAG...ACTACGCACAGCTGCCGCGTTGAGCGTACGATGGAGGCCTACCTCTCGTTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR CCA 90 bp CATCGTACGCTCAACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCCGTACTCTCACTGCTGAGTaGGAACAGGCTCAGGTGCAA +
Preference number: 4 (lower is better)
Translates to: HRTLNAAAVRSSRCQELRTLTAE*EQAQVQ
Trigger: TTGCACCTGAGCCTGTTCCCACTCAGCAGTGAGAGT...ACGGAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTTGAGCGTACGATG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR CCA 90 bp CTCCATCGTACGCTCAACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCTTGTGGAGGGGGTTGTaGGGGTTCCTCTTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: LHRTLNAAAVRSSRCQELLWRGL*GFLFLQ
Trigger: CTGAAGAAAGAGGAACCCCCACAACCCCCTCCACAA...GAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTTGAGCGTACGATGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR CCA 90 bp GACAAAGCGGCAGATTCCGTCTCCACTGGCAGTCTCCCGGCAGCGTCCATCCCACAGAGGTGGAAGAGTTaGACTGTGTGTGGGGTAAGG +
Preference number: 4 (lower is better)
Translates to: DKAADSVSTGSLPAASIPQRWKS*TVCGVR
Trigger: CCTTACCCCACACACAGTCCAACTCTTCCACCTCTG...TGGGATGGACGCTGCCGGGAGACTGCCAGTGGAGACGGAATCTGCCGCTTTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR TCA 90 bp TCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTGCGGTGCTCAGGCTCCTTaGGGTGACCACTGGGCACCC +
Preference number: 4 (lower is better)
Translates to: SPHCPGLSRTSELKLSSCGAQAP*GDHWAP
Trigger: GGGTGCCCAGTGGTCACCTCAAGGAGCCTGAGCACC...GCAGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426655.6
CDS-3UTR TCA 90 bp TCTCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTACACCGGGCCGGCGATaGTGCCTACCAGCTCCACCG +
Preference number: 4 (lower is better)
Translates to: SPHIAQVCLELLSSSYLPTPGRR*CLPAPP
Trigger: CGGTGGAGCTGGTAGGCATCATCGCCGGCCCGGTGT...AGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426655.6
CDS-3UTR TCA 90 bp GAGGGCTGGGCAGAAACGAGAGGTAGGCCTCCATCGTACGCTCAACGCGGCAGCATATCTCTGCTTCCCTaGACCAAGACCGTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: EGWAETRGRPPSYAQRGSISLLP*TKTVLH
Trigger: GTGAAGAACGGTCTTGGTTCAGGGAAGCAGAGATAT...GCTGCCGCGTTGAGCGTACGATGGAGGCCTACCTCTCGTTTCTGCCCAGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR TCA 90 bp CTGCACTTCTGGTTCTTCCGGGCCACCTTGGTGTGCTGTGGGCTGGTCCCCGAATTTCATGGCGCAGCATaGCCGTCTGGTATATCTCTG +
Preference number: 4 (lower is better)
Translates to: LHFWFFRATLVCCGLVPEFHGAA*PSGISL
Trigger: CAGAGATATACCAGACGGTCATGCTGCGCCATGAAA...TTCGGGGACCAGCCCACAGCACACCAAGGTGGCCCGGAAGAACCAGAAGTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR TCA 90 bp GGGCAGAAACGAGAGGTAGGCCTCCATCGTACGCTCAACGCGGCAGCTGTGCGTTTTCATGGCGCAGCATaGCCGTCTGGTATATCTCTG +
Preference number: 4 (lower is better)
Translates to: GQKREVGLHRTLNAAAVRFHGAA*PSGISL
Trigger: CAGAGATATACCAGACGGTCATGCTGCGCCATGAAA...ACGCACAGCTGCCGCGTTGAGCGTACGATGGAGGCCTACCTCTCGTTTCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR TCA 90 bp GCTGGACAGACAAAGCGGCAGATTCCGTCTCCACTGGCAGTCTCCCGGCAGCGTTTTCATGGCGCAGCATaGCCGTCTGGTATATCTCTG +
Preference number: 4 (lower is better)
Translates to: AGQTKRQIPSPLAVSRQRFHGAA*PSGISL
Trigger: CAGAGATATACCAGACGGTCATGCTGCGCCATGAAA...ACGCTGCCGGGAGACTGCCAGTGGAGACGGAATCTGCCGCTTTGTCTGTCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR TCA 90 bp GAAGGAGACCACTGCATGAATCCCGTGCTATGCGCACCGGGGCACTCCCCGCCAGACTTTAAGTCTCGATaGGCAATTCCAGGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: EGDHCMNPVLCAPGHSPPDFKSR*AIPGFP
Trigger: AGGGAAGCCTGGAATTGCTCATCGAGACTTAAAGTC...TGGCGGGGAGTGCCCCGGTGCGCATAGCACGGGATTCATGCAGTGGTCTCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS-3UTR TCA 90 bp CTCCATCGTACGCTCAACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCTGTCAATGGTGTCAGTaGCTGCATCATGACGGACAG +
Preference number: 4 (lower is better)
Translates to: LHRTLNAAAVRSSRCQELCQWCQ*LHHDGQ
Trigger: CTGTCCGTCATGATGCAGTCACTGACACCATTGACA...GAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTTGAGCGTACGATGGAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR TCA 90 bp GCCACCTTGGTGTGCTGTGGGCTGGTCCCCGAAGGAAACCCTCAGGGCAGCTTATTGGGACGCAGCTTCTaGTCACATACAACCTTTCGC +
Preference number: 4 (lower is better)
Translates to: ATLVCCGLVPEGNPQGSLLGRSF*SHTTFR
Trigger: GCGAAAGGTTGTATGTGATCAGAAGCTGCGTCCCAA...TAAGCTGCCCTGAGGGTTTCCTTCGGGGACCAGCCCACAGCACACCAAGGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR TCA 90 bp TCAACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCCGTGTGGAGAGAGTTGGGACGCAGCTTCTaGTCACATACAACCTTTCGC +
Preference number: 4 (lower is better)
Translates to: STRQLCVVLAARSSVWRELGRSF*SHTTFR
Trigger: GCGAAAGGTTGTATGTGATCAGAAGCTGCGTCCCAA...CTCTCTCCACACGGAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR TCA 90 bp CATCGTACGCTCAACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCCGTTTGGGACGCAGCTTCTaGTCACATACAACCTTTCGC +
Preference number: 4 (lower is better)
Translates to: HRTLNAAAVRSSRCQELRLGRSF*SHTTFR
Trigger: GCGAAAGGTTGTATGTGATCAGAAGCTGCGTCCCAA...ACGGAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTTGAGCGTACGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR TCA 90 bp GGAGCTTCCCAAAGACCTGCTCCATCTTCCCCAGAGGTGGAAGAGTTGGACTGTAACCCAACATGGGAGTaGGCGAGTCTCTCCCGGGCT +
Preference number: 4 (lower is better)
Translates to: GASQRPAPSSPEVEELDCNPTWE*ASLSRA
Trigger: AGCCCGGGAGAGACTCGCTCACTCCCATGTTGGGTT...ACAGTCCAACTCTTCCACCTCTGGGGAAGATGGAGCAGGTCTTTGGGAAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR TCA 90 bp AGGGCTGGGCAGAAACGAGAGGTAGGCCTCCATCGTACGCTCAACGCGGCAGCTACCTTCCCTCCACCCTaGTCAGACAGTCCAGTAAAA +
Preference number: 4 (lower is better)
Translates to: RAGQKREVGLHRTLNAAATFPPP*SDSPVK
Trigger: TTTTACTGGACTGTCTGATCAGGGTGGAGGGAAGGT...AGCTGCCGCGTTGAGCGTACGATGGAGGCCTACCTCTCGTTTCTGCCCAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR TCA 90 bp CATCGTACGCTCAACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCCGTAAATACGAGAGAGACTaGGCCTCAGGGCAAAGAGGA +
Preference number: 4 (lower is better)
Translates to: HRTLNAAAVRSSRCQELRKYERD*ASGQRG
Trigger: TCCTCTTTGCCCTGAGGCTCAGTCTCTCTCGTATTT...ACGGAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTTGAGCGTACGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR TCA 90 bp AGGAGACCACTGCATGAATCCCGTGCTATGCGCACCGGGGCACTCCCCGCCACGATACTGCTTCTGATGTaGAGGAGACCACTGCATGAA +
Preference number: 4 (lower is better)
Translates to: RRPLHESRAMRTGALPATILLLM*RRPLHE
Trigger: TTCATGCAGTGGTCTCCTTCACATCAGAAGCAGTAT...CGTGGCGGGGAGTGCCCCGGTGCGCATAGCACGGGATTCATGCAGTGGTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS-3UTR GCA 90 bp GAAGGAGACCACTGCATGAATCCCGTGCTATGCGCACCGGGGCACTCCCCGCCATCAAGTCGATCCTGTTaGAGTAGTCAGTGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: EGDHCMNPVLCAPGHSPPSSRSC*SSQCSS
Trigger: GCTGCTACACTGACTACTGCAACAGGATCGACTTGA...TGGCGGGGAGTGCCCCGGTGCGCATAGCACGGGATTCATGCAGTGGTCTCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS-3UTR GCA 90 bp GAGGGCTGGGCAGAAACGAGAGGTAGGCCTCCATCGTACGCTCAACGCGGCAGCTCAAGTCGATCCTGTTaGAGTAGTCAGTGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: EGWAETRGRPPSYAQRGSSSRSC*SSQCSS
Trigger: GCTGCTACACTGACTACTGCAACAGGATCGACTTGA...GCTGCCGCGTTGAGCGTACGATGGAGGCCTACCTCTCGTTTCTGCCCAGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR GCA 90 bp TGGCAACACCTCGGTTCCTCCGGCCCCTCCCAAGCGCCCCTGTCATGGCTCCTGACAGCTGTGTCCAGGTaGCATTATCTTTATTGTCAG +
Preference number: 4 (lower is better)
Translates to: WQHLGSSGPSQAPLSWLLTAVSR*HYLYCQ
Trigger: CTGACAATAAAGATAATGGCACCTGGACACAGCTGT...CAGGAGCCATGACAGGGGCGCTTGGGAGGGGCCGGAGGAACCGAGGTGTTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR GCA 90 bp CCCGAAGGAAACCCTCAGGGCAGCTTAGCACTGGCAACACCTCGGTTCCTCCGGAATGGTGTCAGTGACTaGATCATGACGGACAGCCAG +
Preference number: 4 (lower is better)
Translates to: PEGNPQGSLALATPRFLRNGVSD*IMTDSQ
Trigger: CTGGCTGTCCGTCATGATGCAGTCACTGACACCATT...CCGGAGGAACCGAGGTGTTGCCAGTGCTAAGCTGCCCTGAGGGTTTCCTTCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR GCA 90 bp CATCGTACGCTCAACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCCGTAATGGTGTCAGTGACTaGATCATGACGGACAGCCAG +
Preference number: 4 (lower is better)
Translates to: HRTLNAAAVRSSRCQELRNGVSD*IMTDSQ
Trigger: CTGGCTGTCCGTCATGATGCAGTCACTGACACCATT...ACGGAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTTGAGCGTACGATG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR GCA 90 bp ACAGAGGGCTGGGCAGAAACGAGAGGTAGGCCTCCATCGTACGCTCAACGCGGCGGACTCCTCCAGAATTaGATCTTCGAGCAATCTCCC +
Preference number: 4 (lower is better)
Translates to: TEGWAETRGRPPSYAQRGGLLQN*IFEQSP
Trigger: GGGAGATTGCTCGAAGATGCAATTCTGGAGGAGTCC...GCCGCGTTGAGCGTACGATGGAGGCCTACCTCTCGTTTCTGCCCAGCCCTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR GCA 90 bp GCCTCAGGGCAAAGAGGAACTCTCACTGCTGAGTGGGAACAGGCTCAGGTGCAACCCCCGACCTGCACATaGACAGAAAGCTCAAGCAGG +
Preference number: 4 (lower is better)
Translates to: ASGQRGTLTAEWEQAQVQPPTCT*TESSSR
Trigger: CCTGCTTGAGCTTTCTGTGCATGTGCAGGTCGGGGG...TTGCACCTGAGCCTGTTCCCACTCAGCAGTGAGAGTTCCTCTTTGCCCTGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR CCA 90 bp ACAGAAGTACCGAGAATGCCGTTCGGGGGCCTTTATGGCGACGTAAGAACGGGCGGACCAGCTCCACTTTaGGGATGCAGGTGCGCACAT +
Preference number: 4 (lower is better)
Translates to: TEVPRMPFGGLYGDVRTGGPAPL*GCRCAH
Trigger: ATGTGCGCACCTGCATCCCCAAAGTGGAGCTGGTCC...GCCCGTTCTTACGTCGCCATAAAGGCCCCCGAACGGCATTCTCGGTACTTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR CCA 90 bp AGGGTTTCCCATGAATGTGGCTTGGGAGCCACCGCGTTAGAATATACTGCTTCTCCACCGGGCCCCACATaGACGGGTGCTCAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: RVSHECGLGATALEYTASPPGPT*TGAQAP
Trigger: AGGAGCCTGAGCACCCGTCCATGTGGGGCCCGGTGG...AGAAGCAGTATATTCTAACGCGGTGGCTCCCAAGCCACATTCATGGGAAACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS-3UTR CCA 90 bp TCTCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTCCACCGGGCCCCACATaGACGGGTGCTCAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: SPHIAQVCLELLSSSYLPPPGPT*TGAQAP
Trigger: AGGAGCCTGAGCACCCGTCCATGTGGGGCCCGGTGG...AGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426655.6
CDS-3UTR CCA 90 bp CGAGAGGTAGGCCTCCATCGTACGCTCAACGCGGCAGCTGTGCGTAGTTCTCGCTCTCTTGTAAAACGATaGTTCGGGCCACTGTGCGCT +
Preference number: 4 (lower is better)
Translates to: REVGLHRTLNAAAVRSSRSLVKR*FGPLCA
Trigger: AGCGCACAGTGGCCCGAACCATCGTTTTACAAGAGA...GCGAGAACTACGCACAGCTGCCGCGTTGAGCGTACGATGGAGGCCTACCTCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR CCA 90 bp ACGTGTAAGGGCATGGCACGAACCAGGCACAACGGGGGACGCACCTCGGCACATGGCCCAGGTCTGCTATaGCACACATGCCATTTTTCT +
Preference number: 4 (lower is better)
Translates to: TCKGMARTRHNGGRTSAHGPGLL*HTCHFS
Trigger: AGAAAAATGGCATGTGTGCCATAGCAGACCTGGGCC...ATGTGCCGAGGTGCGTCCCCCGTTGTGCCTGGTTCGTGCCATGCCCTTACACGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR CCA 90 bp CGTACGCTCAACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCCGTGTGTTCGCATTTCCTCAATaGAAGGGTCAGAGGGCACTA +
Preference number: 4 (lower is better)
Translates to: RTLNAAAVRSSRCQELRVFAFPQ*KGQRAL
Trigger: TAGTGCCCTCTGACCCTTCCATTGAGGAAATGCGAA...CACACGGAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTTGAGCGTACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR CCA 90 bp CAGAAACGAGAGGTAGGCCTCCATCGTACGCTCAACGCGGCAGCTGTGCGTAGTGTGCAGGTAGCACTATaGATCAGGGTTAGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: QKREVGLHRTLNAAAVRSVQVAL*IRVSLG
Trigger: CCCGAGGCTAACCCTGATCCATAGTGCTACCTGCAC...ACTACGCACAGCTGCCGCGTTGAGCGTACGATGGAGGCCTACCTCTCGTTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR CCA 90 bp AGGGCTGGGCAGAAACGAGAGGTAGGCCTCCATCGTACGCTCAACGCGGCAGCTCTTCCTCCCTTGTATTaGAGTCTAAGGCTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: RAGQKREVGLHRTLNAAALPPLY*SLRLLS
Trigger: GCTGAGGAGCCTTAGACTCCAATACAAGGGAGGAAG...AGCTGCCGCGTTGAGCGTACGATGGAGGCCTACCTCTCGTTTCTGCCCAGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541224.5
CDS-3UTR TCA 90 bp TCAACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCCGTGTGGAGAGAGCCATCCCATCCAGATTaGAAATGGAAACCATGCAGG +
Preference number: 4 (lower is better)
Translates to: STRQLCVVLAARSSVWREPSHPD*KWKPCR
Trigger: CCTGCATGGTTTCCATTTTCAATCTGGATGGGATGG...CTCTCTCCACACGGAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR TCA 90 bp GAATGTGGCTTGGGAGCCACCGCGTTAGAATATACTGCTTCTGATGTGAAGGAGGGTGCTCAGGCTCCTTaGGGTGACCACTGGGCACCC +
Preference number: 4 (lower is better)
Translates to: ECGLGATALEYTASDVKEGAQAP*GDHWAP
Trigger: GGGTGCCCAGTGGTCACCTCAAGGAGCCTGAGCACC...CTCCTTCACATCAGAAGCAGTATATTCTAACGCGGTGGCTCCCAAGCCACATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS-3UTR TCA 90 bp GGTCCCCGAAGGAAACCCTCAGGGCAGCTTAGCACTGGCAACACCTCGGTTCCTGAGACACATCTCACATaGGGGATCTTCCATGTCCAG +
Preference number: 4 (lower is better)
Translates to: GPRRKPSGQLSTGNTSVPETHLT*GIFHVQ
Trigger: CTGGACATGGAAGATCCCTCATGTGAGATGTGTCTC...AGGAACCGAGGTGTTGCCAGTGCTAAGCTGCCCTGAGGGTTTCCTTCGGGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR TCA 90 bp GGGCAGAAACGAGAGGTAGGCCTCCATCGTACGCTCAACGCGGCAGCTGTGCGTATATCTCTGCTTCCCTaGACCAAGACCGTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: GQKREVGLHRTLNAAAVRISLLP*TKTVLH
Trigger: GTGAAGAACGGTCTTGGTTCAGGGAAGCAGAGATAT...ACGCACAGCTGCCGCGTTGAGCGTACGATGGAGGCCTACCTCTCGTTTCTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR TCA 90 bp AGGGCTGGGCAGAAACGAGAGGTAGGCCTCCATCGTACGCTCAACGCGGCAGCTATATCTCTGCTTCCCTaGACCAAGACCGTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: RAGQKREVGLHRTLNAAAISLLP*TKTVLH
Trigger: GTGAAGAACGGTCTTGGTTCAGGGAAGCAGAGATAT...AGCTGCCGCGTTGAGCGTACGATGGAGGCCTACCTCTCGTTTCTGCCCAGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR TCA 90 bp GCCACCTTGGTGTGCTGTGGGCTGGTCCCCGAAGGAAACCCTCAGGGCAGCTTAGACTTTAAGTCTCGATaGGCAATTCCAGGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: ATLVCCGLVPEGNPQGSLDFKSR*AIPGFP
Trigger: AGGGAAGCCTGGAATTGCTCATCGAGACTTAAAGTC...TAAGCTGCCCTGAGGGTTTCCTTCGGGGACCAGCCCACAGCACACCAAGGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR TCA 90 bp GAAGGAGACCACTGCATGAATCCCGTGCTATGCGCACCGGGGCACTCCCCGCCAAGAATATACTGCTTCTaGTGTGAAGGAGACCACTGC +
Preference number: 4 (lower is better)
Translates to: EGDHCMNPVLCAPGHSPPRIYCF*CEGDHC
Trigger: GCAGTGGTCTCCTTCACATCAGAAGCAGTATATTCT...TGGCGGGGAGTGCCCCGGTGCGCATAGCACGGGATTCATGCAGTGGTCTCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS-3UTR GCA 90 bp CTCCATCGTACGCTCAACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCTCAAGTCGATCCTGTTaGAGTAGTCAGTGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: LHRTLNAAAVRSSRCQELSSRSC*SSQCSS
Trigger: GCTGCTACACTGACTACTGCAACAGGATCGACTTGA...GAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTTGAGCGTACGATGGAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR GCA 90 bp GCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCCGTGTGGAGAGAGGGAGCCTGCTATGGCACACATaGCATTTTTCTTCACCAGAA +
Preference number: 4 (lower is better)
Translates to: AAAVRSSRCQELRVERGSLLWHT*HFSSPE
Trigger: TTCTGGTGAAGAAAAATGGCATGTGTGCCATAGCAG...GCTCCCTCTCTCCACACGGAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR GCA 90 bp TGGCAACACCTCGGTTCCTCCGGCCCCTCCCAAGCGCCCCTGTCATGGCTCCTGACCAAAAATATACACTaGTGTTTCCAGGATCTGGGA +
Preference number: 4 (lower is better)
Translates to: WQHLGSSGPSQAPLSWLLTKNIH*CFQDLG
Trigger: TCCCAGATCCTGGAAACAGCAGTGTATATTTTTGGT...CAGGAGCCATGACAGGGGCGCTTGGGAGGGGCCGGAGGAACCGAGGTGTTGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR GCA 90 bp AGGAGGGGAAAGCGCGGCTCAGAGCTGCCTGTGAGAGGGGCTGCACTTCTGGTTGGGGCTCAGAATGAATaGAGTGATTTGAGGTCTCAC +
Preference number: 4 (lower is better)
Translates to: RRGKRGSELPVRGAALLVGAQNE*SDLRSH
Trigger: GTGAGACCTCAAATCACTGCATTCATTCTGAGCCCC...AACCAGAAGTGCAGCCCCTCTCACAGGCAGCTCTGAGCCGCGCTTTCCCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR CCA 90 bp CAGAGGGCTGGGCAGAAACGAGAGGTAGGCCTCCATCGTACGCTCAACGCGGCAGGAGCGTCTTGTCTTTaGAGAGACACATCTCACATG +
Preference number: 4 (lower is better)
Translates to: QRAGQKREVGLHRTLNAAGASCL*RDTSHM
Trigger: CATGTGAGATGTGTCTCTCCAAAGACAAGACGCTCC...TGCCGCGTTGAGCGTACGATGGAGGCCTACCTCTCGTTTCTGCCCAGCCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR CCA 90 bp CTCCATCGTACGCTCAACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCGGAGCGTCTTGTCTTTaGAGAGACACATCTCACATG +
Preference number: 4 (lower is better)
Translates to: LHRTLNAAAVRSSRCQELGASCL*RDTSHM
Trigger: CATGTGAGATGTGTCTCTCCAAAGACAAGACGCTCC...GAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTTGAGCGTACGATGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR CCA 90 bp TCAACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCCGTGTGGAGAGAGGGAGCGTCTTGTCTTTaGAGAGACACATCTCACATG +
Preference number: 4 (lower is better)
Translates to: STRQLCVVLAARSSVWREGASCL*RDTSHM
Trigger: CATGTGAGATGTGTCTCTCCAAAGACAAGACGCTCC...CTCTCTCCACACGGAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR CCA 90 bp AAACGAGAGGTAGGCCTCCATCGTACGCTCAACGCGGCAGCTGTGCGTAGTTCTATTCCAGGCTTCCCTTaGGTGCCCACGATCTCCATG +
Preference number: 4 (lower is better)
Translates to: KREVGLHRTLNAAAVRSSIPGFP*VPTISM
Trigger: CATGGAGATCGTGGGCACCCAAGGGAAGCCTGGAAT...AGAACTACGCACAGCTGCCGCGTTGAGCGTACGATGGAGGCCTACCTCTCGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR CCA 90 bp GAGGTAGGCCTCCATCGTACGCTCAACGCGGCAGCTGTGCGTAGTTCTCGCTGCTTCGCATTTCCTCAATaGAAGGGTCAGAGGGCACTA +
Preference number: 4 (lower is better)
Translates to: EVGLHRTLNAAAVRSSRCFAFPQ*KGQRAL
Trigger: TAGTGCCCTCTGACCCTTCCATTGAGGAAATGCGAA...GCAGCGAGAACTACGCACAGCTGCCGCGTTGAGCGTACGATGGAGGCCTACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR CCA 90 bp ACAGAGGGCTGGGCAGAAACGAGAGGTAGGCCTCCATCGTACGCTCAACGCGGCTTCGCATTTCCTCAATaGAAGGGTCAGAGGGCACTA +
Preference number: 4 (lower is better)
Translates to: TEGWAETRGRPPSYAQRGFAFPQ*KGQRAL
Trigger: TAGTGCCCTCTGACCCTTCCATTGAGGAAATGCGAA...GCCGCGTTGAGCGTACGATGGAGGCCTACCTCTCGTTTCTGCCCAGCCCTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR CCA 90 bp GCCTCAGGGCAAAGAGGAACTCTCACTGCTGAGTGGGAACAGGCTCAGGTGCAAGGAGTGGACGTGTGTTaGCAGATCCCAGAGGCTACT +
Preference number: 4 (lower is better)
Translates to: ASGQRGTLTAEWEQAQVQGVDVC*QIPEAT
Trigger: AGTAGCCTCTGGGATCTGCCAACACACGTCCACTCC...TTGCACCTGAGCCTGTTCCCACTCAGCAGTGAGAGTTCCTCTTTGCCCTGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR TCA 90 bp CACGTGCCAGATGCACCGGGTTTCGCGGGACTTCCCACTACAACCAGTTCGAGGCCATCCCATCCAGATTaGAAATGGAAACCATGCAGG +
Preference number: 4 (lower is better)
Translates to: HVPDAPGFAGLPTTTSSRPSHPD*KWKPCR
Trigger: CCTGCATGGTTTCCATTTTCAATCTGGATGGGATGG...CCTCGAACTGGTTGTAGTGGGAAGTCCCGCGAAACCCGGTGCATCTGGCACGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR TCA 90 bp CAGAAACGAGAGGTAGGCCTCCATCGTACGCTCAACGCGGCAGCTGTGCGTAGTGAGACACATCTCACATaGGGGATCTTCCATGTCCAG +
Preference number: 4 (lower is better)
Translates to: QKREVGLHRTLNAAAVRSETHLT*GIFHVQ
Trigger: CTGGACATGGAAGATCCCTCATGTGAGATGTGTCTC...ACTACGCACAGCTGCCGCGTTGAGCGTACGATGGAGGCCTACCTCTCGTTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR TCA 90 bp GGCACATGCACACACGGCTGGACAGACAAAGCGGCAGATTCCGTCTCCACTGGCGACTTTAAGTCTCGATaGGCAATTCCAGGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: GTCTHGWTDKAADSVSTGDFKSR*AIPGFP
Trigger: AGGGAAGCCTGGAATTGCTCATCGAGACTTAAAGTC...GCCAGTGGAGACGGAATCTGCCGCTTTGTCTGTCCAGCCGTGTGTGCATGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR TCA 90 bp GATGCACCGGGTTTCGCGGGACTTCCCACTACAACCAGTTCGAGGTGTGGCACTTGTCAATGGTGTCAGTaGCTGCATCATGACGGACAG +
Preference number: 4 (lower is better)
Translates to: DAPGFAGLPTTTSSRCGTCQWCQ*LHHDGQ
Trigger: CTGTCCGTCATGATGCAGTCACTGACACCATTGACA...AGTGCCACACCTCGAACTGGTTGTAGTGGGAAGTCCCGCGAAACCCGGTGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR TCA 90 bp TGGGAGCTTCCCAAAGACCTGCTCCATCTTCCCCAGAGGTGGAAGAGTTGGACTTTGGTCCCCACCCTCTaGTTCGGGGCAATGTCAATG +
Preference number: 4 (lower is better)
Translates to: WELPKDLLHLPQRWKSWTLVPTL*FGAMSM
Trigger: CATTGACATTGCCCCGAATCAGAGGGTGGGGACCAA...AGTCCAACTCTTCCACCTCTGGGGAAGATGGAGCAGGTCTTTGGGAAGCTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR TCA 90 bp GACAAAGCGGCAGATTCCGTCTCCACTGGCAGTCTCCCGGCAGCGTCCATCCCAATACCTAAGATATGCTaGCCAAATCACCACCCACAG +
Preference number: 4 (lower is better)
Translates to: DKAADSVSTGSLPAASIPIPKIC*PNHHPQ
Trigger: CTGTGGGTGGTGATTTGGTCAGCATATCTTAGGTAT...TGGGATGGACGCTGCCGGGAGACTGCCAGTGGAGACGGAATCTGCCGCTTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR TCA 90 bp CATCGTACGCTCAACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCCGTTTCACCCACATTTGTTaGATAAATGCCTGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: HRTLNAAAVRSSRCQELRFTHIC*INAWRG
Trigger: CCCTCTCCAGGCATTTATTCAACAAATGTGGGTGAA...ACGGAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTTGAGCGTACGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR TCA 90 bp GGCACATGCACACACGGCTGGACAGACAAAGCGGCAGATTCCGTCTCCACTGGCATGAATGCAGTGATTTaGGGTCTCACCTGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: GTCTHGWTDKAADSVSTGMNAVI*GLTWGS
Trigger: AGAACCCCAGGTGAGACCTCAAATCACTGCATTCAT...GCCAGTGGAGACGGAATCTGCCGCTTTGTCTGTCCAGCCGTGTGTGCATGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR TCA 90 bp TCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTGCGGCTCCTCTGGGGCCTaGCCCCATTGTCAAGAAACC +
Preference number: 4 (lower is better)
Translates to: SPHCPGLSRTSELKLSSCGSSGA*PHCQET
Trigger: GGTTTCTTGACAATGGGGTCAGGCCCCAGAGGAGCC...GCAGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000426655.6
CDS-3UTR TCA 90 bp CAGAGGGCTGGGCAGAAACGAGAGGTAGGCCTCCATCGTACGCTCAACGCGGCATGGCAATGTGAGGAATaGGCAGTCTGCTTTATTGTC +
Preference number: 4 (lower is better)
Translates to: QRAGQKREVGLHRTLNAAWQCEE*AVCFIV
Trigger: GACAATAAAGCAGACTGCTCATTCCTCACATTGCCA...TGCCGCGTTGAGCGTACGATGGAGGCCTACCTCTCGTTTCTGCCCAGCCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541224.5
CDS-3UTR GCA 90 bp TCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTGCAGCAGCAGTGGGTGTTaGGCAGGTCCTCCGAGCTCA +
Preference number: 4 (lower is better)
Translates to: SPHCPGLSRTSELKLSSCSSSGC*AGPPSS
Trigger: TGAGCTCGGAGGACCTGCGCAACACCCACTGCTGCT...GCAGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426655.6
CDS-3UTR GCA 90 bp GGTCCCCGAAGGAAACCCTCAGGGCAGCTTAGCACTGGCAACACCTCGGTTCCTTCAAGTCGATCCTGTTaGAGTAGTCAGTGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: GPRRKPSGQLSTGNTSVPSSRSC*SSQCSS
Trigger: GCTGCTACACTGACTACTGCAACAGGATCGACTTGA...AGGAACCGAGGTGTTGCCAGTGCTAAGCTGCCCTGAGGGTTTCCTTCGGGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR GCA 90 bp ACGTGCCAGATGCACCGGGTTTCGCGGGACTTCCCACTACAACCAGTTCGAGGTGGACTCCTCCAGAATTaGATCTTCGAGCAATCTCCC +
Preference number: 4 (lower is better)
Translates to: TCQMHRVSRDFPLQPVRGGLLQN*IFEQSP
Trigger: GGGAGATTGCTCGAAGATGCAATTCTGGAGGAGTCC...ACCTCGAACTGGTTGTAGTGGGAAGTCCCGCGAAACCCGGTGCATCTGGCACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR GCA 90 bp CGGCTTCAGTTTCTCCCCAACTCTCACTTAGTGTTAAGAGTGGCAGAGGTGGGTGTGCGTAGTTCTCGCTaGCAGGAGCTCCGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: RLQFLPNSHLVLRVAEVGVRSSR*QELRVE
Trigger: CTCCACACGGAGCTCCTGGCAGCGAGAACTACGCAC...ACCCACCTCTGCCACTCTTAACACTAAGTGAGAGTTGGGGAGAAACTGAAGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR GCA 90 bp CCTCTTTTGTCATGGACAACTGGGCCAGCTTTGGTTCCACAGTCTGAGATGGAGGCCTGTGAGAGGGGCTaGACTTCTGGTTCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: PLLSWTTGPALVPQSEMEACERG*TSGSSG
Trigger: CCCGGAAGAACCAGAAGTGCAGCCCCTCTCACAGGC...CTCCATCTCAGACTGTGGAACCAAAGCTGGCCCAGTTGTCCATGACAAAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR GCA 90 bp GGGCAGAAACGAGAGGTAGGCCTCCATCGTACGCTCAACGCGGCAGCTGTGCGTAGGGAAACTAGATGCTaGTCACTACTGAAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: GQKREVGLHRTLNAAAVRRETRC*SLLKRG
Trigger: GCCTCTTTTCAGTAGTGAGCAGCATCTAGTTTCCCT...ACGCACAGCTGCCGCGTTGAGCGTACGATGGAGGCCTACCTCTCGTTTCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR GCA 90 bp ACAGAGGGCTGGGCAGAAACGAGAGGTAGGCCTCCATCGTACGCTCAACGCGGCACAGCTGTGTCCAGGTaGCATTATTCAGTGGGAATA +
Preference number: 4 (lower is better)
Translates to: TEGWAETRGRPPSYAQRGTAVSR*HYSVGI
Trigger: TATTCCCACTGAATAATGGCACCTGGACACAGCTGT...GCCGCGTTGAGCGTACGATGGAGGCCTACCTCTCGTTTCTGCCCAGCCCTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541224.5
CDS-3UTR CCA 90 bp TCTCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTTGGCCTGGAGGCAGCTaGTGCACGCACACAGCAGAG +
Preference number: 4 (lower is better)
Translates to: SPHIAQVCLELLSSSYLPWPGGS*CTHTAE
Trigger: CTCTGCTGTGTGCGTGCACCAGCTGCCTCCAGGCCA...AGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426655.6
CDS-3UTR CCA 90 bp TCGGCACATGCACACACGGCTGGACAGACAAAGCGGCAGATTCCGTCTCCACTGTCTCTTGTAAAACGATaGTTCGGGCCACTGTGCGCT +
Preference number: 4 (lower is better)
Translates to: SAHAHTAGQTKRQIPSPLSLVKR*FGPLCA
Trigger: AGCGCACAGTGGCCCGAACCATCGTTTTACAAGAGA...CAGTGGAGACGGAATCTGCCGCTTTGTCTGTCCAGCCGTGTGTGCATGTGCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR CCA 90 bp CAGAAACGAGAGGTAGGCCTCCATCGTACGCTCAACGCGGCAGCTGTGCGTAGTCTGGCTCATTTCCCATaGCTGACACTAACACCCAAG +
Preference number: 4 (lower is better)
Translates to: QKREVGLHRTLNAAAVRSLAHFP*LTLTPK
Trigger: CTTGGGTGTTAGTGTCAGCCATGGGAAATGAGCCAG...ACTACGCACAGCTGCCGCGTTGAGCGTACGATGGAGGCCTACCTCTCGTTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR CCA 90 bp CAGAAACGAGAGGTAGGCCTCCATCGTACGCTCAACGCGGCAGCTGTGCGTAGTGTAGGGCTCCTGAAGTaGATGCAAACCTCTCACCTT +
Preference number: 4 (lower is better)
Translates to: QKREVGLHRTLNAAAVRSVGLLK*MQTSHL
Trigger: AAGGTGAGAGGTTTGCATCCACTTCAGGAGCCCTAC...ACTACGCACAGCTGCCGCGTTGAGCGTACGATGGAGGCCTACCTCTCGTTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR CCA 90 bp GGTCCCCGAAGGAAACCCTCAGGGCAGCTTAGCACTGGCAACACCTCGGTTCCTTCAAGGAATTGGGGGTaGGGACAAAATACGAGAGAG +
Preference number: 4 (lower is better)
Translates to: GPRRKPSGQLSTGNTSVPSRNWG*GQNTRE
Trigger: CTCTCTCGTATTTTGTCCCCACCCCCAATTCCTTGA...AGGAACCGAGGTGTTGCCAGTGCTAAGCTGCCCTGAGGGTTTCCTTCGGGGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR CCA 90 bp GCAGAGAACTGCTGGGTTGGAGGCAGAGATGCTCTAAGGCTACATACACAATACGGGCCAACTGGGGAGTaGGCTAGTGGCTTGGGAGTG +
Preference number: 4 (lower is better)
Translates to: AENCWVGGRDALRLHTQYGPTGE*ASGLGV
Trigger: CACTCCCAAGCCACTAGCCCACTCCCCAGTTGGCCC...GTATTGTGTATGTAGCCTTAGAGCATCTCTGCCTCCAACCCAGCAGTTCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR TCA 90 bp CAGAAACGAGAGGTAGGCCTCCATCGTACGCTCAACGCGGCAGCTGTGCGTAGTGACTTTAAGTCTCGATaGGCAATTCCAGGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: QKREVGLHRTLNAAAVRSDFKSR*AIPGFP
Trigger: AGGGAAGCCTGGAATTGCTCATCGAGACTTAAAGTC...ACTACGCACAGCTGCCGCGTTGAGCGTACGATGGAGGCCTACCTCTCGTTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR TCA 90 bp GAATGTGGCTTGGGAGCCACCGCGTTAGAATATACTGCTTCTGATGTGAAGGAGTCAGTGACTGCATCATaGCGGACAGCCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: ECGLGATALEYTASDVKESVTAS*RTARPR
Trigger: CCTGGGCCTGGCTGTCCGTCATGATGCAGTCACTGA...CTCCTTCACATCAGAAGCAGTATATTCTAACGCGGTGGCTCCCAAGCCACATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS-3UTR TCA 90 bp TCTCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTTCAGTGACTGCATCATaGCGGACAGCCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SPHIAQVCLELLSSSYLPSVTAS*RTARPR
Trigger: CCTGGGCCTGGCTGTCCGTCATGATGCAGTCACTGA...AGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426655.6
CDS-3UTR GCA 90 bp TCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTGCGCTCCACTTTGGGGATaGAGGTGCGCACATGGTGCT +
Preference number: 4 (lower is better)
Translates to: SPHCPGLSRTSELKLSSCAPLWG*RCAHGA
Trigger: AGCACCATGTGCGCACCTGCATCCCCAAAGTGGAGC...GCAGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426655.6
CDS-3UTR GCA 90 bp GAATGTGGCTTGGGAGCCACCGCGTTAGAATATACTGCTTCTGATGTGAAGGAGAGCAGCAGTGGGTGTTaGGCAGGTCCTCCGAGCTCA +
Preference number: 4 (lower is better)
Translates to: ECGLGATALEYTASDVKESSSGC*AGPPSS
Trigger: TGAGCTCGGAGGACCTGCGCAACACCCACTGCTGCT...CTCCTTCACATCAGAAGCAGTATATTCTAACGCGGTGGCTCCCAAGCCACATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS-3UTR GCA 90 bp TCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTGCTGGTTCGGGCCACTGTaGGCTGGACAAAGAGGGGTA +
Preference number: 4 (lower is better)
Translates to: SPHCPGLSRTSELKLSSCWFGPL*AGQRGV
Trigger: TACCCCTCTTTGTCCAGCGCACAGTGGCCCGAACCA...GCAGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426655.6
CDS-3UTR GCA 90 bp TCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTGCCTCCATGTGCAGGTGTaGCAGCCCACTAGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: SPHCPGLSRTSELKLSSCLHVQV*QPTSSR
Trigger: TCTGCTGCTAGTGGGCTGGCACACCTGCACATGGAG...GCAGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426655.6
CDS-3UTR GCA 90 bp GCCACCTTGGTGTGCTGTGGGCTGGTCCCCGAAGGAAACCCTCAGGGCAGCTTACTGCTATGGCACACATaGCATTTTTCTTCACCAGAA +
Preference number: 4 (lower is better)
Translates to: ATLVCCGLVPEGNPQGSLLLWHT*HFSSPE
Trigger: TTCTGGTGAAGAAAAATGGCATGTGTGCCATAGCAG...TAAGCTGCCCTGAGGGTTTCCTTCGGGGACCAGCCCACAGCACACCAAGGTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR GCA 90 bp CTCCATCGTACGCTCAACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCCTGCTATGGCACACATaGCATTTTTCTTCACCAGAA +
Preference number: 4 (lower is better)
Translates to: LHRTLNAAAVRSSRCQELLLWHT*HFSSPE
Trigger: TTCTGGTGAAGAAAAATGGCATGTGTGCCATAGCAG...GAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTTGAGCGTACGATGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR CCA 90 bp TCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTGCTCTCACACGTGTAGTTaGCCTGGAGGCAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: SPHCPGLSRTSELKLSSCSHTCS*PGGSWC
Trigger: GCACCAGCTGCCTCCAGGCCAACTACACGTGTGAGA...GCAGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426655.6
CDS-3UTR CCA 90 bp TCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTGCGGACCAGCTCCACTTTaGGGATGCAGGTGCGCACAT +
Preference number: 4 (lower is better)
Translates to: SPHCPGLSRTSELKLSSCGPAPL*GCRCAH
Trigger: ATGTGCGCACCTGCATCCCCAAAGTGGAGCTGGTCC...GCAGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426655.6
CDS-3UTR CCA 90 bp TTTGGCAGAGAACTGCTGGGTTGGAGGCAGAGATGCTCTAAGGCTACATACACACGGGCCACTGTGCGCTaGACAAAGAGGGGTAACCCT +
Preference number: 4 (lower is better)
Translates to: FGRELLGWRQRCSKATYTRATVR*TKRGNP
Trigger: AGGGTTACCCCTCTTTGTCCAGCGCACAGTGGCCCG...TGTGTATGTAGCCTTAGAGCATCTCTGCCTCCAACCCAGCAGTTCTCTGCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR CCA 90 bp TCTCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTCGGGCCACTGTGCGCTaGACAAAGAGGGGTAACCCT +
Preference number: 4 (lower is better)
Translates to: SPHIAQVCLELLSSSYLPRATVR*TKRGNP
Trigger: AGGGTTACCCCTCTTTGTCCAGCGCACAGTGGCCCG...AGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426655.6
CDS-3UTR TCA 90 bp TCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTGCTTGGTCCCCACCCTCTaGTTCGGGGCAATGTCAATG +
Preference number: 4 (lower is better)
Translates to: SPHCPGLSRTSELKLSSCLVPTL*FGAMSM
Trigger: CATTGACATTGCCCCGAATCAGAGGGTGGGGACCAA...GCAGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000426655.6
CDS-3UTR TCA 90 bp CACGTGCCAGATGCACCGGGTTTCGCGGGACTTCCCACTACAACCAGTTCGAGGCAAACATTTCCAGTGTaGTTGAGCTATGTGCGTTCA +
Preference number: 4 (lower is better)
Translates to: HVPDAPGFAGLPTTTSSRQTFPV*LSYVRS
Trigger: TGAACGCACATAGCTCAATCACACTGGAAATGTTTG...CCTCGAACTGGTTGTAGTGGGAAGTCCCGCGAAACCCGGTGCATCTGGCACGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR TCA 90 bp TCTCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTGTGGAGAAATCAGGCTaGTGGGAAAGCCGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: SPHIAQVCLELLSSSYLPVEKSG*WESRRR
Trigger: CCTCCTGCGGCTTTCCCATCAGCCTGATTTCTCCAC...AGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426655.6
CDS-3UTR CCA 90 bp GAATGTGGCTTGGGAGCCACCGCGTTAGAATATACTGCTTCTGATGTGAAGGAGGGACCAGCTCCACTTTaGGGATGCAGGTGCGCACAT +
Preference number: 4 (lower is better)
Translates to: ECGLGATALEYTASDVKEGPAPL*GCRCAH
Trigger: ATGTGCGCACCTGCATCCCCAAAGTGGAGCTGGTCC...CTCCTTCACATCAGAAGCAGTATATTCTAACGCGGTGGCTCCCAAGCCACATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS-3UTR CCA 90 bp TCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTGCATTCCAGGCTTCCCTTaGGTGCCCACGATCTCCATG +
Preference number: 4 (lower is better)
Translates to: SPHCPGLSRTSELKLSSCIPGFP*VPTISM
Trigger: CATGGAGATCGTGGGCACCCAAGGGAAGCCTGGAAT...GCAGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426655.6
CDS-3UTR CCA 90 bp TCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTGCAACTCTGCCACCAGTTaGGGATGTTGGGACGCAGCT +
Preference number: 4 (lower is better)
Translates to: SPHCPGLSRTSELKLSSCNSATS*GCWDAA
Trigger: AGCTGCGTCCCAACATCCCCAACTGGTGGCAGAGTT...GCAGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426655.6
3UTR CAA 72 bp ACCCACCACCCTCACATTTTGGCCCAAAAGCCTCTTTaGTCATGGACAACTGGGCCAGCTTTGGTTCCACAG +
Preference number: 4 (lower is better)
Translates to: THHPHILAQKPL*SWTTGPALVPQ
Trigger: CTGTGGAACCAAAGCTGGCCCAGTTGTCCATGACAAAAGAGGCTTTTGGGCCAAAATGTGAGGGTGGTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257963.9
3UTR CAA 72 bp TTTTACAGTGCTCCAGGAGTAGGACCCAAGCATGTCTaGTCCACAGATGTATTCCCAGCACCTGGCACCCAG +
Preference number: 4 (lower is better)
Translates to: FYSAPGVGPKHV*STDVFPAPGTQ
Trigger: CTGGGTGCCAGGTGCTGGGAATACATCTGTGGACAAGACATGCTTGGGTCCTACTCCTGGAGCACTGTAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR TCA 90 bp GAATGTGGCTTGGGAGCCACCGCGTTAGAATATACTGCTTCTGATGTGAAGGAGTTGGTCCCCACCCTCTaGTTCGGGGCAATGTCAATG +
Preference number: 4 (lower is better)
Translates to: ECGLGATALEYTASDVKELVPTL*FGAMSM
Trigger: CATTGACATTGCCCCGAATCAGAGGGTGGGGACCAA...CTCCTTCACATCAGAAGCAGTATATTCTAACGCGGTGGCTCCCAAGCCACATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS-3UTR TCA 90 bp GTTTCCCATGAATGTGGCTTGGGAGCCACCGCGTTAGAATATACTGCTTCTGATCAGCAGGGTTTCCCATaGATGTGGCTTGGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: VSHECGLGATALEYTASDQQGFP*MWLGSH
Trigger: GTGGCTCCCAAGCCACATTCATGGGAAACCCTGCTG...ATCAGAAGCAGTATATTCTAACGCGGTGGCTCCCAAGCCACATTCATGGGAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS-3UTR GCA 90 bp GTTTCCCATGAATGTGGCTTGGGAGCCACCGCGTTAGAATATACTGCTTCTGATGCTCCACTTTGGGGATaGAGGTGCGCACATGGTGCT +
Preference number: 4 (lower is better)
Translates to: VSHECGLGATALEYTASDAPLWG*RCAHGA
Trigger: AGCACCATGTGCGCACCTGCATCCCCAAAGTGGAGC...ATCAGAAGCAGTATATTCTAACGCGGTGGCTCCCAAGCCACATTCATGGGAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS-3UTR GCA 90 bp TCGGCACATGCACACACGGCTGGACAGACAAAGCGGCAGATTCCGTCTCCACTGACAGCTGTGTCCAGGTaGCATTATCTTTATTGTCAG +
Preference number: 4 (lower is better)
Translates to: SAHAHTAGQTKRQIPSPLTAVSR*HYLYCQ
Trigger: CTGACAATAAAGATAATGGCACCTGGACACAGCTGT...CAGTGGAGACGGAATCTGCCGCTTTGTCTGTCCAGCCGTGTGTGCATGTGCCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR GCA 90 bp TCTCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTAGCCAGGCCCAGGTCTaGTATGGCACACATGCCATT +
Preference number: 4 (lower is better)
Translates to: SPHIAQVCLELLSSSYLPSQAQV*YGTHAI
Trigger: AATGGCATGTGTGCCATAGCAGACCTGGGCCTGGCT...AGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426655.6
CDS-3UTR GCA 90 bp GATGCACCGGGTTTCGCGGGACTTCCCACTACAACCAGTTCGAGGTGTGGCACTACCAGGGAAACTAGATaGTGCTCACTACTGAAAAGA +
Preference number: 4 (lower is better)
Translates to: DAPGFAGLPTTTSSRCGTTRETR*CSLLKR
Trigger: TCTTTTCAGTAGTGAGCAGCATCTAGTTTCCCTGGT...AGTGCCACACCTCGAACTGGTTGTAGTGGGAAGTCCCGCGAAACCCGGTGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR GCA 90 bp CGGCTTCAGTTTCTCCCCAACTCTCACTTAGTGTTAAGAGTGGCAGAGGTGGGTGCTTTGGCAGAGAACTaGTGGGTTGGAGGCAGAGAT +
Preference number: 4 (lower is better)
Translates to: RLQFLPNSHLVLRVAEVGALAEN*WVGGRD
Trigger: ATCTCTGCCTCCAACCCAGCAGTTCTCTGCCAAAGC...ACCCACCTCTGCCACTCTTAACACTAAGTGAGAGTTGGGGAGAAACTGAAGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR GCA 90 bp CCTCTTTTGTCATGGACAACTGGGCCAGCTTTGGTTCCACAGTCTGAGATGGAGCAGAAGTACCGAGAATaGCGTTCGGGGGCCTTTATG +
Preference number: 4 (lower is better)
Translates to: PLLSWTTGPALVPQSEMEQKYRE*RSGAFM
Trigger: CATAAAGGCCCCCGAACGGCATTCTCGGTACTTCTG...CTCCATCTCAGACTGTGGAACCAAAGCTGGCCCAGTTGTCCATGACAAAAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR CCA 90 bp TCTCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTATGCAGGTGCGCACATaGTGCTCCATCCCATCCAGA +
Preference number: 4 (lower is better)
Translates to: SPHIAQVCLELLSSSYLPMQVRT*CSIPSR
Trigger: TCTGGATGGGATGGAGCACCATGTGCGCACCTGCAT...AGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426655.6
CDS-3UTR CCA 90 bp TCTCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTGGGCCATGTATCGTTTaGTCCCCACCCTCTGATTCG +
Preference number: 4 (lower is better)
Translates to: SPHIAQVCLELLSSSYLPGPCIV*SPPSDS
Trigger: CGAATCAGAGGGTGGGGACCAAACGATACATGGCCC...AGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426655.6
CDS-3UTR CCA 90 bp TCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTGCACCAGTTGGGGATGTTaGGACGCAGCTTCTGATCAC +
Preference number: 4 (lower is better)
Translates to: SPHCPGLSRTSELKLSSCTSWGC*DAASDH
Trigger: GTGATCAGAAGCTGCGTCCCAACATCCCCAACTGGT...GCAGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426655.6
CDS-3UTR TCA 90 bp TCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTGCTTTCATGGCGCAGCATaGCCGTCTGGTATATCTCTG +
Preference number: 4 (lower is better)
Translates to: SPHCPGLSRTSELKLSSCFHGAA*PSGISL
Trigger: CAGAGATATACCAGACGGTCATGCTGCGCCATGAAA...GCAGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426655.6
CDS-3UTR TCA 90 bp TCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTGCTGTCAATGGTGTCAGTaGCTGCATCATGACGGACAG +
Preference number: 4 (lower is better)
Translates to: SPHCPGLSRTSELKLSSCCQWCQ*LHHDGQ
Trigger: CTGTCCGTCATGATGCAGTCACTGACACCATTGACA...GCAGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426655.6
CDS-3UTR TCA 90 bp ACAGAAGTACCGAGAATGCCGTTCGGGGGCCTTTATGGCGACGTAAGAACGGGCCATTTCCAGTGTGATTaGGCTATGTGCGTTCAATTG +
Preference number: 4 (lower is better)
Translates to: TEVPRMPFGGLYGDVRTGHFQCD*AMCVQL
Trigger: CAATTGAACGCACATAGCTCAATCACACTGGAAATG...GCCCGTTCTTACGTCGCCATAAAGGCCCCCGAACGGCATTCTCGGTACTTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR TCA 90 bp GCACAGAAAGCTCAAGCAGGTAAGTGCGCACCTACAGACACACACACACACTCACTTGGACTTGGTCTGTaGATCCAGAATCCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: AQKAQAGKCAPTDTHTHSLGLGL*IQNPEV
Trigger: CACCTCTGGATTCTGGATTCACAGACCAAGTCCAAG...TGAGTGTGTGTGTGTGTCTGTAGGTGCGCACTTACCTGCTTGAGCTTTCTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR GCA 90 bp GTTTCCCATGAATGTGGCTTGGGAGCCACCGCGTTAGAATATACTGCTTCTGATAGCCAGGCCCAGGTCTaGTATGGCACACATGCCATT +
Preference number: 4 (lower is better)
Translates to: VSHECGLGATALEYTASDSQAQV*YGTHAI
Trigger: AATGGCATGTGTGCCATAGCAGACCTGGGCCTGGCT...ATCAGAAGCAGTATATTCTAACGCGGTGGCTCCCAAGCCACATTCATGGGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS-3UTR GCA 90 bp TCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTGCAATGGTGTCAGTGACTaGATCATGACGGACAGCCAG +
Preference number: 4 (lower is better)
Translates to: SPHCPGLSRTSELKLSSCNGVSD*IMTDSQ
Trigger: CTGGCTGTCCGTCATGATGCAGTCACTGACACCATT...GCAGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426655.6
CDS-3UTR GCA 90 bp ACAGAAGTACCGAGAATGCCGTTCGGGGGCCTTTATGGCGACGTAAGAACGGGCACCAGGGAAACTAGATaGTGCTCACTACTGAAAAGA +
Preference number: 4 (lower is better)
Translates to: TEVPRMPFGGLYGDVRTGTRETR*CSLLKR
Trigger: TCTTTTCAGTAGTGAGCAGCATCTAGTTTCCCTGGT...GCCCGTTCTTACGTCGCCATAAAGGCCCCCGAACGGCATTCTCGGTACTTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR GCA 90 bp TCTCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTCTCAAGCTATCTTCCTaGCTCAGCCTCTCAAAGCGC +
Preference number: 4 (lower is better)
Translates to: SPHIAQVCLELLSSSYLPLKLSS*LSLSKR
Trigger: GCGCTTTGAGAGGCTGAGGCAGGAAGATAGCTTGAG...AGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426655.6
CDS-3UTR CCA 90 bp GTTTCCCATGAATGTGGCTTGGGAGCCACCGCGTTAGAATATACTGCTTCTGATATGCAGGTGCGCACATaGTGCTCCATCCCATCCAGA +
Preference number: 4 (lower is better)
Translates to: VSHECGLGATALEYTASDMQVRT*CSIPSR
Trigger: TCTGGATGGGATGGAGCACCATGTGCGCACCTGCAT...ATCAGAAGCAGTATATTCTAACGCGGTGGCTCCCAAGCCACATTCATGGGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS-3UTR CCA 90 bp GCCACCTTGGTGTGCTGTGGGCTGGTCCCCGAAGGAAACCCTCAGGGCAGCTTAAATTATGAAACCTTCTaGTCTCAAAACAGGCATCTA +
Preference number: 4 (lower is better)
Translates to: ATLVCCGLVPEGNPQGSLNYETF*SQNRHL
Trigger: TAGATGCCTGTTTTGAGACCAGAAGGTTTCATAATT...TAAGCTGCCCTGAGGGTTTCCTTCGGGGACCAGCCCACAGCACACCAAGGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR CCA 90 bp CATCGTACGCTCAACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCCGTATGTACAGCAGAAATTaGACAGGCTCATTCTTATAT +
Preference number: 4 (lower is better)
Translates to: HRTLNAAAVRSSRCQELRMYSRN*TGSFLY
Trigger: ATATAAGAATGAGCCTGTCCAATTTCTGCTGTACAT...ACGGAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTTGAGCGTACGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR CCA 90 bp AGGGTTTCCCATGAATGTGGCTTGGGAGCCACCGCGTTAGAATATACTGCTTCTTCCAGCATCCTGGAATaGGAGGTAGGAGCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: RVSHECGLGATALEYTASSSILE*EVGAKA
Trigger: TGCCTTTGCTCCTACCTCCCATTCCAGGATGCTGGA...AGAAGCAGTATATTCTAACGCGGTGGCTCCCAAGCCACATTCATGGGAAACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS-3UTR TCA 90 bp GAATGTGGCTTGGGAGCCACCGCGTTAGAATATACTGCTTCTGATGTGAAGGAGGAGACACATCTCACATaGGGGATCTTCCATGTCCAG +
Preference number: 4 (lower is better)
Translates to: ECGLGATALEYTASDVKEETHLT*GIFHVQ
Trigger: CTGGACATGGAAGATCCCTCATGTGAGATGTGTCTC...CTCCTTCACATCAGAAGCAGTATATTCTAACGCGGTGGCTCCCAAGCCACATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS-3UTR TCA 90 bp TCTCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTGAGACACATCTCACATaGGGGATCTTCCATGTCCAG +
Preference number: 4 (lower is better)
Translates to: SPHIAQVCLELLSSSYLPETHLT*GIFHVQ
Trigger: CTGGACATGGAAGATCCCTCATGTGAGATGTGTCTC...AGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426655.6
CDS-3UTR TCA 90 bp TCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTGCATATCTCTGCTTCCCTaGACCAAGACCGTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: SPHCPGLSRTSELKLSSCISLLP*TKTVLH
Trigger: GTGAAGAACGGTCTTGGTTCAGGGAAGCAGAGATAT...GCAGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426655.6
CDS-3UTR TCA 90 bp GAATGTGGCTTGGGAGCCACCGCGTTAGAATATACTGCTTCTGATGTGAAGGAGTTTCATGGCGCAGCATaGCCGTCTGGTATATCTCTG +
Preference number: 4 (lower is better)
Translates to: ECGLGATALEYTASDVKEFHGAA*PSGISL
Trigger: CAGAGATATACCAGACGGTCATGCTGCGCCATGAAA...CTCCTTCACATCAGAAGCAGTATATTCTAACGCGGTGGCTCCCAAGCCACATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS-3UTR TCA 90 bp TCTCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTTTGGGACGCAGCTTCTaGTCACATACAACCTTTCGC +
Preference number: 4 (lower is better)
Translates to: SPHIAQVCLELLSSSYLPLGRSF*SHTTFR
Trigger: GCGAAAGGTTGTATGTGATCAGAAGCTGCGTCCCAA...AGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426655.6
CDS-3UTR GCA 90 bp TCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTGCTCAAGTCGATCCTGTTaGAGTAGTCAGTGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: SPHCPGLSRTSELKLSSCSSRSC*SSQCSS
Trigger: GCTGCTACACTGACTACTGCAACAGGATCGACTTGA...GCAGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426655.6
CDS-3UTR GCA 90 bp TCTCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTCGTCTGGTATATCTCTaGTTCCCTGAACCAAGACCG +
Preference number: 4 (lower is better)
Translates to: SPHIAQVCLELLSSSYLPRLVYL*FPEPRP
Trigger: CGGTCTTGGTTCAGGGAAGCAGAGATATACCAGACG...AGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426655.6
CDS-3UTR GCA 90 bp TCTCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTGGACTCCTCCAGAATTaGATCTTCGAGCAATCTCCC +
Preference number: 4 (lower is better)
Translates to: SPHIAQVCLELLSSSYLPGLLQN*IFEQSP
Trigger: GGGAGATTGCTCGAAGATGCAATTCTGGAGGAGTCC...AGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426655.6
CDS-3UTR GCA 90 bp TTTGGCAGAGAACTGCTGGGTTGGAGGCAGAGATGCTCTAAGGCTACATACACAGGGAACAGGCTCAGGTaGAAGGACAAACATTTCCAG +
Preference number: 4 (lower is better)
Translates to: FGRELLGWRQRCSKATYTGNRLR*KDKHFQ
Trigger: CTGGAAATGTTTGTCCTTGCACCTGAGCCTGTTCCC...TGTGTATGTAGCCTTAGAGCATCTCTGCCTCCAACCCAGCAGTTCTCTGCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR CCA 90 bp TCTCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTTCTCTTGTAAAACGATaGTTCGGGCCACTGTGCGCT +
Preference number: 4 (lower is better)
Translates to: SPHIAQVCLELLSSSYLPSLVKR*FGPLCA
Trigger: AGCGCACAGTGGCCCGAACCATCGTTTTACAAGAGA...AGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426655.6
CDS-3UTR CCA 90 bp AGGGTTTCCCATGAATGTGGCTTGGGAGCCACCGCGTTAGAATATACTGCTTCTGGCCCAGGTCTGCTATaGCACACATGCCATTTTTCT +
Preference number: 4 (lower is better)
Translates to: RVSHECGLGATALEYTASGPGLL*HTCHFS
Trigger: AGAAAAATGGCATGTGTGCCATAGCAGACCTGGGCC...AGAAGCAGTATATTCTAACGCGGTGGCTCCCAAGCCACATTCATGGGAAACCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS-3UTR CCA 90 bp TCTCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTGGCCCAGGTCTGCTATaGCACACATGCCATTTTTCT +
Preference number: 4 (lower is better)
Translates to: SPHIAQVCLELLSSSYLPGPGLL*HTCHFS
Trigger: AGAAAAATGGCATGTGTGCCATAGCAGACCTGGGCC...AGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426655.6
CDS-3UTR CCA 90 bp TCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTGCTTCGCATTTCCTCAATaGAAGGGTCAGAGGGCACTA +
Preference number: 4 (lower is better)
Translates to: SPHCPGLSRTSELKLSSCFAFPQ*KGQRAL
Trigger: TAGTGCCCTCTGACCCTTCCATTGAGGAAATGCGAA...GCAGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426655.6
CDS-3UTR CCA 90 bp GCAGAGAACTGCTGGGTTGGAGGCAGAGATGCTCTAAGGCTACATACACAATACCATCTTCCCCAGAGGTaGAAGAGTTGGACTGTGTGT +
Preference number: 4 (lower is better)
Translates to: AENCWVGGRDALRLHTQYHLPQR*KSWTVC
Trigger: ACACACAGTCCAACTCTTCCACCTCTGGGGAAGATG...GTATTGTGTATGTAGCCTTAGAGCATCTCTGCCTCCAACCCAGCAGTTCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR TCA 90 bp TCTCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTCCATCCCATCCAGATTaGAAATGGAAACCATGCAGG +
Preference number: 4 (lower is better)
Translates to: SPHIAQVCLELLSSSYLPPSHPD*KWKPCR
Trigger: CCTGCATGGTTTCCATTTTCAATCTGGATGGGATGG...AGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426655.6
CDS-3UTR TCA 90 bp TCTCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTGACTTTAAGTCTCGATaGGCAATTCCAGGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: SPHIAQVCLELLSSSYLPDFKSR*AIPGFP
Trigger: AGGGAAGCCTGGAATTGCTCATCGAGACTTAAAGTC...AGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426655.6
CDS-3UTR TCA 90 bp GCAGAGAACTGCTGGGTTGGAGGCAGAGATGCTCTAAGGCTACATACACAATACTGTAACATTCCAATCTaGGTCCCGAGATCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: AENCWVGGRDALRLHTQYCNIPI*VPRSGF
Trigger: GAAGCCAGATCTCGGGACTCAGATTGGAATGTTACA...GTATTGTGTATGTAGCCTTAGAGCATCTCTGCCTCCAACCCAGCAGTTCTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR TCA 90 bp TCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTGCTTTGTCTCGAACTTCTaGGCTCAAGCTATCTTCCTG +
Preference number: 4 (lower is better)
Translates to: SPHCPGLSRTSELKLSSCFVSNF*AQAIFL
Trigger: CAGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAA...GCAGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426655.6
CDS-3UTR GCA 90 bp AGGGTTTCCCATGAATGTGGCTTGGGAGCCACCGCGTTAGAATATACTGCTTCTAGGTACCTCCAGAATTaGATCTTCGAGCAATCTCCC +
Preference number: 4 (lower is better)
Translates to: RVSHECGLGATALEYTASRYLQN*IFEQSP
Trigger: GGGAGATTGCTCGAAGATGCAATTCTGGAGGTACCT...AGAAGCAGTATATTCTAACGCGGTGGCTCCCAAGCCACATTCATGGGAAACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS-3UTR GCA 90 bp GTTTCCCATGAATGTGGCTTGGGAGCCACCGCGTTAGAATATACTGCTTCTGATTGTGAAGGAGACCACTaGATGAATCCCGTGCTATGC +
Preference number: 4 (lower is better)
Translates to: VSHECGLGATALEYTASDCEGDH*MNPVLC
Trigger: GCATAGCACGGGATTCATGCAGTGGTCTCCTTCACA...ATCAGAAGCAGTATATTCTAACGCGGTGGCTCCCAAGCCACATTCATGGGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS-3UTR CCA 90 bp GAATGTGGCTTGGGAGCCACCGCGTTAGAATATACTGCTTCTGATGTGAAGGAGGGAGCGTCTTGTCTTTaGAGAGACACATCTCACATG +
Preference number: 4 (lower is better)
Translates to: ECGLGATALEYTASDVKEGASCL*RDTSHM
Trigger: CATGTGAGATGTGTCTCTCCAAAGACAAGACGCTCC...CTCCTTCACATCAGAAGCAGTATATTCTAACGCGGTGGCTCCCAAGCCACATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS-3UTR CCA 90 bp TCTCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTGGAGCGTCTTGTCTTTaGAGAGACACATCTCACATG +
Preference number: 4 (lower is better)
Translates to: SPHIAQVCLELLSSSYLPGASCL*RDTSHM
Trigger: CATGTGAGATGTGTCTCTCCAAAGACAAGACGCTCC...AGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426655.6
CDS-3UTR CCA 90 bp GCAGAGAACTGCTGGGTTGGAGGCAGAGATGCTCTAAGGCTACATACACAATACTTTGTCATGGACAACTaGGCCAGCTTTGGTTCCACA +
Preference number: 4 (lower is better)
Translates to: AENCWVGGRDALRLHTQYFVMDN*ASFGST
Trigger: TGTGGAACCAAAGCTGGCCCAGTTGTCCATGACAAA...GTATTGTGTATGTAGCCTTAGAGCATCTCTGCCTCCAACCCAGCAGTTCTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR CCA 90 bp GAATGTGGCTTGGGAGCCACCGCGTTAGAATATACTGCTTCTGATGTGAAGGAGGCAGTAAAACAGCTTTaGGTGATCCAGCATCCTGGA +
Preference number: 4 (lower is better)
Translates to: ECGLGATALEYTASDVKEAVKQL*VIQHPG
Trigger: TCCAGGATGCTGGATCACCCAAAGCTGTTTTACTGC...CTCCTTCACATCAGAAGCAGTATATTCTAACGCGGTGGCTCCCAAGCCACATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS-3UTR TCA 90 bp TCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTGCATAGTAAATAATAACTaGCACTCTCAGGGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: SPHCPGLSRTSELKLSSCIVNNN*HSQGAP
Trigger: AGGAGCCCCCTGAGAGTGTCAGTTATTATTTACTAT...GCAGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426655.6
CDS-3UTR GCA 90 bp TCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTGCACAGCTGTGTCCAGGTaGCATTATCTTTATTGTCAG +
Preference number: 4 (lower is better)
Translates to: SPHCPGLSRTSELKLSSCTAVSR*HYLYCQ
Trigger: CTGACAATAAAGATAATGGCACCTGGACACAGCTGT...GCAGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426655.6
CDS-3UTR TCA 90 bp GAATGTGGCTTGGGAGCCACCGCGTTAGAATATACTGCTTCTGATGTGAAGGAGCGCTATTCAACAAACTaGTCCCTGAAGAATAAACGC +
Preference number: 4 (lower is better)
Translates to: ECGLGATALEYTASDVKERYSTN*SLKNKR
Trigger: GCGTTTATTCTTCAGGGATCAGTTTGTTGAATAGCG...CTCCTTCACATCAGAAGCAGTATATTCTAACGCGGTGGCTCCCAAGCCACATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS-3UTR GCA 90 bp AGGGTTTCCCATGAATGTGGCTTGGGAGCCACCGCGTTAGAATATACTGCTTCTACAGCTGTGTCCAGGTaGCATTATCTTTATTGTCAG +
Preference number: 4 (lower is better)
Translates to: RVSHECGLGATALEYTASTAVSR*HYLYCQ
Trigger: CTGACAATAAAGATAATGGCACCTGGACACAGCTGT...AGAAGCAGTATATTCTAACGCGGTGGCTCCCAAGCCACATTCATGGGAAACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS-3UTR GCA 90 bp TCTCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTCTGCTATGGCACACATaGCATTTTTCTTCACCAGAA +
Preference number: 4 (lower is better)
Translates to: SPHIAQVCLELLSSSYLPLLWHT*HFSSPE
Trigger: TTCTGGTGAAGAAAAATGGCATGTGTGCCATAGCAG...AGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426655.6
CDS-3UTR GCA 90 bp CCTCTTTTGTCATGGACAACTGGGCCAGCTTTGGTTCCACAGTCTGAGATGGAGCATTTGTTGAATAAATaGCTGGAGAGGGTACAACCA +
Preference number: 4 (lower is better)
Translates to: PLLSWTTGPALVPQSEMEHLLNK*LERVQP
Trigger: TGGTTGTACCCTCTCCAGGCATTTATTCAACAAATG...CTCCATCTCAGACTGTGGAACCAAAGCTGGCCCAGTTGTCCATGACAAAAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR CCA 90 bp TGGGAGCTTCCCAAAGACCTGCTCCATCTTCCCCAGAGGTGGAAGAGTTGGACTCCCCCAATGACACAATaGTATTTAAACGAAATTAGT +
Preference number: 4 (lower is better)
Translates to: WELPKDLLHLPQRWKSWTPPMTQ*YLNEIS
Trigger: ACTAATTTCGTTTAAATACCATTGTGTCATTGGGGG...AGTCCAACTCTTCCACCTCTGGGGAAGATGGAGCAGGTCTTTGGGAAGCTCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR GCA 90 bp GTTTCCCATGAATGTGGCTTGGGAGCCACCGCGTTAGAATATACTGCTTCTGATCTGCTATGGCACACATaGCATTTTTCTTCACCAGAA +
Preference number: 4 (lower is better)
Translates to: VSHECGLGATALEYTASDLLWHT*HFSSPE
Trigger: TTCTGGTGAAGAAAAATGGCATGTGTGCCATAGCAG...ATCAGAAGCAGTATATTCTAACGCGGTGGCTCCCAAGCCACATTCATGGGAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS-3UTR GCA 90 bp TTTGTGGAGGGGGTTGTGGGGGTTCCTCTTTCTTCAGTGATCTTATATAAGAACAGGGAAACTAGATGCTaGTCACTACTGAAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: FVEGVVGVPLSSVILYKNRETRC*SLLKRG
Trigger: GCCTCTTTTCAGTAGTGAGCAGCATCTAGTTTCCCT...GTTCTTATATAAGATCACTGAAGAAAGAGGAACCCCCACAACCCCCTCCACAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR CCA 90 bp AAAGTTATTATATACCTAAGATATGCTGACCAAATCACCACCCACAGCCGTGCTAGAGAACTGCTGGGTTaGAGGCAGAGATGCTCTAAG +
Preference number: 4 (lower is better)
Translates to: KVIIYLRYADQITTHSRARELLG*RQRCSK
Trigger: CTTAGAGCATCTCTGCCTCCAACCCAGCAGTTCTCT...AGCACGGCTGTGGGTGGTGATTTGGTCAGCATATCTTAGGTATATAATAACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR CCA 90 bp TTACATTTGCATACTGAAGAGGTAAAGTGTCTAAGTGGCTATTTTACAGTCCTTGAGTTGGACTGTGTGTaGGGTAAGGGCAGAAGGGCC +
Preference number: 4 (lower is better)
Translates to: LHLHTEEVKCLSGYFTVLELDCV*GKGRRA
Trigger: GGCCCTTCTGCCCTTACCCCACACACAGTCCAACTC...AAGGACTGTAAAATAGCCACTTAGACACTTTACCTCTTCAGTATGCAAATGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR CAA 90 bp GTACGCTCAACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCCGTGTGGCGGGCTCTGTCCCTCTaGCGGGCCAGGGCTCCTGGC +
Preference number: 5 (lower is better)
Translates to: VRSTRQLCVVLAARSSVWRALSL*RARAPG
Trigger: GCCAGGAGCCCTGGCCCGCAAGAGGGACAGAGCCCG...CCACACGGAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTTGAGCGTAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR CAA 90 bp CACGCACGTGTAAGGGCATGGCACGAACCAGGCACAACGGGGGACGCACCTCGGTGGGAGAGGGTCTTCTaGATGCGCAGGGCCGTCAGG +
Preference number: 5 (lower is better)
Translates to: HARVRAWHEPGTTGDAPRWERVF*MRRAVR
Trigger: CCTGACGGCCCTGCGCATCAAGAAGACCCTCTCCCA...CCGAGGTGCGTCCCCCGTTGTGCCTGGTTCGTGCCATGCCCTTACACGTGCGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR CAA 90 bp CCTGTCATGGCTCCTGGCCACGTGCCAGATGCACCGGGTTTCGCGGGACTTCCCTGGGAGAGGGTCTTCTaGATGCGCAGGGCCGTCAGG +
Preference number: 5 (lower is better)
Translates to: PVMAPGHVPDAPGFAGLPWERVF*MRRAVR
Trigger: CCTGACGGCCCTGCGCATCAAGAAGACCCTCTCCCA...GGGAAGTCCCGCGAAACCCGGTGCATCTGGCACGTGGCCAGGAGCCATGACAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR CAA 90 bp GAGGGCTGGGCAGAAACGAGAGGTAGGCCTCCATCGTACGCTCAACGCGGCAGCTTCTTCCGGGCCACCTaGGTGTGCTGTGGGCTGGTC +
Preference number: 5 (lower is better)
Translates to: EGWAETRGRPPSYAQRGSFFRAT*VCCGLV
Trigger: GACCAGCCCACAGCACACCAAGGTGGCCCGGAAGAA...GCTGCCGCGTTGAGCGTACGATGGAGGCCTACCTCTCGTTTCTGCCCAGCCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR CAA 90 bp AACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCCGTGTGGAGAGAGGGTTCTTCCGGGCCACCTaGGTGTGCTGTGGGCTGGTC +
Preference number: 5 (lower is better)
Translates to: NAAAVRSSRCQELRVERGFFRAT*VCCGLV
Trigger: GACCAGCCCACAGCACACCAAGGTGGCCCGGAAGAA...CCCTCTCTCCACACGGAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR CAA 90 bp GGGCAGAAACGAGAGGTAGGCCTCCATCGTACGCTCAACGCGGCAGCTGTGCGTTGGGAGAGGGTCTTCTaGATGCGCAGGGCCGTCAGG +
Preference number: 5 (lower is better)
Translates to: GQKREVGLHRTLNAAAVRWERVF*MRRAVR
Trigger: CCTGACGGCCCTGCGCATCAAGAAGACCCTCTCCCA...ACGCACAGCTGCCGCGTTGAGCGTACGATGGAGGCCTACCTCTCGTTTCTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR CAA 90 bp CTCAACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCCGTGTGGAGAGAGAGTGGGCTAGTGGCTaGGGAGTGGACGTGTGTTGG +
Preference number: 5 (lower is better)
Translates to: LNAAAVRSSRCQELRVEREWASG*GVDVCW
Trigger: CCAACACACGTCCACTCCCAAGCCACTAGCCCACTC...TCTCTCCACACGGAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR CAA 90 bp GGAGACCACTGCATGAATCCCGTGCTATGCGCACCGGGGCACTCCCCGCCACGGGGCAGTAAAACAGCTTaGGGTGATCCAGCATCCTGG +
Preference number: 5 (lower is better)
Translates to: GDHCMNPVLCAPGHSPPRGSKTA*GDPASW
Trigger: CCAGGATGCTGGATCACCCAAAGCTGTTTTACTGCC...CCGTGGCGGGGAGTGCCCCGGTGCGCATAGCACGGGATTCATGCAGTGGTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS-3UTR CAA 90 bp AGGAGACCACTGCATGAATCCCGTGCTATGCGCACCGGGGCACTCCCCGCCACGTCCCATGAATGTGGCTaGGGAGCCACCGCGTTAGAA +
Preference number: 5 (lower is better)
Translates to: RRPLHESRAMRTGALPATSHECG*GATALE
Trigger: TTCTAACGCGGTGGCTCCCAAGCCACATTCATGGGA...CGTGGCGGGGAGTGCCCCGGTGCGCATAGCACGGGATTCATGCAGTGGTCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS-3UTR CAA 90 bp GGAGACCACTGCATGAATCCCGTGCTATGCGCACCGGGGCACTCCCCGCCACGGAGATCCTGGAGCGTCTaGTCTTTGGAGAGACACATC +
Preference number: 5 (lower is better)
Translates to: GDHCMNPVLCAPGHSPPRRSWSV*SLERHI
Trigger: GATGTGTCTCTCCAAAGACAAGACGCTCCAGGATCT...CCGTGGCGGGGAGTGCCCCGGTGCGCATAGCACGGGATTCATGCAGTGGTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS-3UTR CAA 90 bp GGCCTCCATCGTACGCTCAACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGAATTCCAGGCTTCCCTaGGGTGCCCACGATCTCCAT +
Preference number: 5 (lower is better)
Translates to: GLHRTLNAAAVRSSRCQENSRLP*GAHDLH
Trigger: ATGGAGATCGTGGGCACCCAAGGGAAGCCTGGAATT...CTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTTGAGCGTACGATGGAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR CAA 90 bp AGGGCTGGGCAGAAACGAGAGGTAGGCCTCCATCGTACGCTCAACGCGGCAGCTCTAAGGCTCCTCAGCTaGGGGGCAGCAGAGACCATT +
Preference number: 5 (lower is better)
Translates to: RAGQKREVGLHRTLNAAALRLLS*GAAETI
Trigger: AATGGTCTCTGCTGCCCCCAAGCTGAGGAGCCTTAG...AGCTGCCGCGTTGAGCGTACGATGGAGGCCTACCTCTCGTTTCTGCCCAGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541224.5
CDS-3UTR CAA 90 bp GCCTGTGAGAGGGGCTGCACTTCTGGTTCTTCCGGGCCACCTTGGTGTGCTGTGAATTCCAGGCTTCCCTaGGGTGCCCACGATCTCCAT +
Preference number: 5 (lower is better)
Translates to: ACERGCTSGSSGPPWCAVNSRLP*GAHDLH
Trigger: ATGGAGATCGTGGGCACCCAAGGGAAGCCTGGAATT...CACAGCACACCAAGGTGGCCCGGAAGAACCAGAAGTGCAGCCCCTCTCACAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR CAA 90 bp CGGCTCAGAGCTGCCTGTGAGAGGGGCTGCACTTCTGGTTCTTCCGGGCCACCTGCCCAAAAGCCTCTTTaGTCATGGACAACTGGGCCA +
Preference number: 5 (lower is better)
Translates to: RLRAACERGCTSGSSGPPAQKPL*SWTTGP
Trigger: TGGCCCAGTTGTCCATGACAAAAGAGGCTTTTGGGC...AGGTGGCCCGGAAGAACCAGAAGTGCAGCCCCTCTCACAGGCAGCTCTGAGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR CAA 90 bp CCACAGAGGGCTGGGCAGAAACGAGAGGTAGGCCTCCATCGTACGCTCAACGCGCCAGAGGTGGAAGAGTaGGACTGTGTGTGGGGTAAG +
Preference number: 5 (lower is better)
Translates to: PQRAGQKREVGLHRTLNAPEVEE*DCVWGK
Trigger: CTTACCCCACACACAGTCCAACTCTTCCACCTCTGG...CGCGTTGAGCGTACGATGGAGGCCTACCTCTCGTTTCTGCCCAGCCCTCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR CAA 90 bp GGCCTCCATCGTACGCTCAACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCCTTCCTCCCTTGTATaGGAGTCTAAGGCTCCTCAG +
Preference number: 5 (lower is better)
Translates to: GLHRTLNAAAVRSSRCQEPSSLV*ESKAPQ
Trigger: CTGAGGAGCCTTAGACTCCAATACAAGGGAGGAAGG...CTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTTGAGCGTACGATGGAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541224.5
CDS-3UTR CAA 90 bp AACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCCGTGTGGAGAGAGGGCTTCCCCTTCCTCCCTaGTATTGGAGTCTAAGGCTC +
Preference number: 5 (lower is better)
Translates to: NAAAVRSSRCQELRVERGLPLPP*YWSLRL
Trigger: GAGCCTTAGACTCCAATACAAGGGAGGAAGGGGAAG...CCCTCTCTCCACACGGAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541224.5
CDS-3UTR CAA 90 bp GGCTGCACTTCTGGTTCTTCCGGGCCACCTTGGTGTGCTGTGGGCTGGTCCCCGTGGAGCGTCTTGTCTTaGGAGAGACACATCTCACAT +
Preference number: 5 (lower is better)
Translates to: GCTSGSSGPPWCAVGWSPWSVLS*ERHISH
Trigger: ATGTGAGATGTGTCTCTCCAAAGACAAGACGCTCCA...CGGGGACCAGCCCACAGCACACCAAGGTGGCCCGGAAGAACCAGAAGTGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR CAA 90 bp GGCCTCCATCGTACGCTCAACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGAGATCCTGGAGCGTCTaGTCTTTGGAGAGACACATC +
Preference number: 5 (lower is better)
Translates to: GLHRTLNAAAVRSSRCQERSWSV*SLERHI
Trigger: GATGTGTCTCTCCAAAGACAAGACGCTCCAGGATCT...CTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTTGAGCGTACGATGGAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR CAA 90 bp GGAGACCACTGCATGAATCCCGTGCTATGCGCACCGGGGCACTCCCCGCCACGGTCCCCAAACCGACCCTaGCCAATAATCTCTTGTAAA +
Preference number: 5 (lower is better)
Translates to: GDHCMNPVLCAPGHSPPRSPNRP*PIISCK
Trigger: TTTACAAGAGATTATTGGCAAGGGTCGGTTTGGGGA...CCGTGGCGGGGAGTGCCCCGGTGCGCATAGCACGGGATTCATGCAGTGGTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS-3UTR CAA 90 bp GGCACATGCACACACGGCTGGACAGACAAAGCGGCAGATTCCGTCTCCACTGGCCTGAGGATGATGCCCTaGGGCTGGCTCATTTCCCAT +
Preference number: 5 (lower is better)
Translates to: GTCTHGWTDKAADSVSTGLRMMP*GWLISH
Trigger: ATGGGAAATGAGCCAGCCCAAGGGCATCATCCTCAG...GCCAGTGGAGACGGAATCTGCCGCTTTGTCTGTCCAGCCGTGTGTGCATGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR CAA 90 bp AGGAGACCACTGCATGAATCCCGTGCTATGCGCACCGGGGCACTCCCCGCCACGGCTACCTCCACACCTTaGATGGCAACCTTAAACGAT +
Preference number: 5 (lower is better)
Translates to: RRPLHESRAMRTGALPATATSTP*MATLND
Trigger: ATCGTTTAAGGTTGCCATCAAAGGTGTGGAGGTAGC...CGTGGCGGGGAGTGCCCCGGTGCGCATAGCACGGGATTCATGCAGTGGTCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS-3UTR CAA 90 bp GGGCAGAAACGAGAGGTAGGCCTCCATCGTACGCTCAACGCGGCAGCTGTGCGTAGATCCTGGAGCGTCTaGTCTTTGGAGAGACACATC +
Preference number: 5 (lower is better)
Translates to: GQKREVGLHRTLNAAAVRRSWSV*SLERHI
Trigger: GATGTGTCTCTCCAAAGACAAGACGCTCCAGGATCT...ACGCACAGCTGCCGCGTTGAGCGTACGATGGAGGCCTACCTCTCGTTTCTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR CAA 90 bp GCCCCTGTCATGGCTCCTGGCCACGTGCCAGATGCACCGGGTTTCGCGGGACTTTCCCCAAACCGACCCTaGCCAATAATCTCTTGTAAA +
Preference number: 5 (lower is better)
Translates to: APVMAPGHVPDAPGFAGLSPNRP*PIISCK
Trigger: TTTACAAGAGATTATTGGCAAGGGTCGGTTTGGGGA...AAGTCCCGCGAAACCCGGTGCATCTGGCACGTGGCCAGGAGCCATGACAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR CAA 90 bp ACGTGCCAGATGCACCGGGTTTCGCGGGACTTCCCACTACAACCAGTTCGAGGTAATTCCAGGCTTCCCTaGGGTGCCCACGATCTCCAT +
Preference number: 5 (lower is better)
Translates to: TCQMHRVSRDFPLQPVRGNSRLP*GAHDLH
Trigger: ATGGAGATCGTGGGCACCCAAGGGAAGCCTGGAATT...ACCTCGAACTGGTTGTAGTGGGAAGTCCCGCGAAACCCGGTGCATCTGGCACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR CAA 90 bp ACAGAGGGCTGGGCAGAAACGAGAGGTAGGCCTCCATCGTACGCTCAACGCGGCTGGACTCCTCCAGAATaGCATCTTCGAGCAATCTCC +
Preference number: 5 (lower is better)
Translates to: TEGWAETRGRPPSYAQRGWTPPE*HLRAIS
Trigger: GGAGATTGCTCGAAGATGCAATTCTGGAGGAGTCCA...GCCGCGTTGAGCGTACGATGGAGGCCTACCTCTCGTTTCTGCCCAGCCCTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR CAA 90 bp TCAACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCCGTGTGGAGAGAGTGGACTCCTCCAGAATaGCATCTTCGAGCAATCTCC +
Preference number: 5 (lower is better)
Translates to: STRQLCVVLAARSSVWREWTPPE*HLRAIS
Trigger: GGAGATTGCTCGAAGATGCAATTCTGGAGGAGTCCA...CTCTCTCCACACGGAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTTGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR CAA 90 bp GACAAAGCGGCAGATTCCGTCTCCACTGGCAGTCTCCCGGCAGCGTCCATCCCATGGACTCCTCCAGAATaGCATCTTCGAGCAATCTCC +
Preference number: 5 (lower is better)
Translates to: DKAADSVSTGSLPAASIPWTPPE*HLRAIS
Trigger: GGAGATTGCTCGAAGATGCAATTCTGGAGGAGTCCA...TGGGATGGACGCTGCCGGGAGACTGCCAGTGGAGACGGAATCTGCCGCTTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR CAA 90 bp CCCGAAGGAAACCCTCAGGGCAGCTTAGCACTGGCAACACCTCGGTTCCTCCGGAGAACGGGCTTGGACTaGGTCTGTGAATCCAGAATC +
Preference number: 5 (lower is better)
Translates to: PEGNPQGSLALATPRFLRRTGLD*VCESRI
Trigger: GATTCTGGATTCACAGACCAAGTCCAAGCCCGTTCT...CCGGAGGAACCGAGGTGTTGCCAGTGCTAAGCTGCCCTGAGGGTTTCCTTCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS CCA 90 bp TGCAGGCCCCATCTGTCTCACACGTGTAGTTGGCCTGGAGGCAGCTaGTGCACGCACACAGCAGAGCTCATTCTCCAAAGTGTTGGGATT +
Preference number: 5 (lower is better)
Translates to: CRPHLSHTCSWPGGS*CTHTAELILQSVGI
Trigger: AATCCCAACACTTTGGAGAATGAGCTCTGCTGTGTGCGTGCACCAGCTGCCTCCAGGCCAACTACACGTGTGAGACAGATGGGGCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536420.5
CDS-3UTR CAA 90 bp GGCCTCCATCGTACGCTCAACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGTCCATCCCATCCAGATaGAAAATGGAAACCATGCAG +
Preference number: 5 (lower is better)
Translates to: GLHRTLNAAAVRSSRCQESIPSR*KMETMQ
Trigger: CTGCATGGTTTCCATTTTCAATCTGGATGGGATGGA...CTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTTGAGCGTACGATGGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR CAA 90 bp ACAGAGGGCTGGGCAGAAACGAGAGGTAGGCCTCCATCGTACGCTCAACGCGGCTGGAGCGTCTTGTCTTaGGAGAGACACATCTCACAT +
Preference number: 5 (lower is better)
Translates to: TEGWAETRGRPPSYAQRGWSVLS*ERHISH
Trigger: ATGTGAGATGTGTCTCTCCAAAGACAAGACGCTCCA...GCCGCGTTGAGCGTACGATGGAGGCCTACCTCTCGTTTCTGCCCAGCCCTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR CAA 90 bp GGTCCCCGAAGGAAACCCTCAGGGCAGCTTAGCACTGGCAACACCTCGGTTCCTAGATCCTGGAGCGTCTaGTCTTTGGAGAGACACATC +
Preference number: 5 (lower is better)
Translates to: GPRRKPSGQLSTGNTSVPRSWSV*SLERHI
Trigger: GATGTGTCTCTCCAAAGACAAGACGCTCCAGGATCT...AGGAACCGAGGTGTTGCCAGTGCTAAGCTGCCCTGAGGGTTTCCTTCGGGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR CAA 90 bp CTCACACGCACGTGTAAGGGCATGGCACGAACCAGGCACAACGGGGGACGCACCTCCCCAAACCGACCCTaGCCAATAATCTCTTGTAAA +
Preference number: 5 (lower is better)
Translates to: LTRTCKGMARTRHNGGRTSPNRP*PIISCK
Trigger: TTTACAAGAGATTATTGGCAAGGGTCGGTTTGGGGA...GGTGCGTCCCCCGTTGTGCCTGGTTCGTGCCATGCCCTTACACGTGCGTGTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR CAA 90 bp TTTGTGGAGGGGGTTGTGGGGGTTCCTCTTTCTTCAGTGATCTTATATAAGAACCGGGCTCTGTCCCTCTaGCGGGCCAGGGCTCCTGGC +
Preference number: 5 (lower is better)
Translates to: FVEGVVGVPLSSVILYKNRALSL*RARAPG
Trigger: GCCAGGAGCCCTGGCCCGCAAGAGGGACAGAGCCCG...GTTCTTATATAAGATCACTGAAGAAAGAGGAACCCCCACAACCCCCTCCACAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR CAA 90 bp CGGCTCAGAGCTGCCTGTGAGAGGGGCTGCACTTCTGGTTCTTCCGGGCCACCTCTTCACCCACATTTGTaGAATAAATGCCTGGAGAGG +
Preference number: 5 (lower is better)
Translates to: RLRAACERGCTSGSSGPPLHPHL*NKCLER
Trigger: CCTCTCCAGGCATTTATTCAACAAATGTGGGTGAAG...AGGTGGCCCGGAAGAACCAGAAGTGCAGCCCCTCTCACAGGCAGCTCTGAGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR CAA 90 bp GCCTGTGAGAGGGGCTGCACTTCTGGTTCTTCCGGGCCACCTTGGTGTGCTGTGAATGAATGCAGTGATTaGAGGTCTCACCTGGGGTTC +
Preference number: 5 (lower is better)
Translates to: ACERGCTSGSSGPPWCAVNECSD*RSHLGF
Trigger: GAACCCCAGGTGAGACCTCAAATCACTGCATTCATT...CACAGCACACCAAGGTGGCCCGGAAGAACCAGAAGTGCAGCCCCTCTCACAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR CAA 90 bp GCTGGACAGACAAAGCGGCAGATTCCGTCTCCACTGGCAGTCTCCCGGCAGCGTTTAGTGGCCAGTAAATaGGCCCAAAGGTTAGGGGAA +
Preference number: 5 (lower is better)
Translates to: AGQTKRQIPSPLAVSRQRLVASK*AQRLGE
Trigger: TTCCCCTAACCTTTGGGCCAATTTACTGGCCACTAA...ACGCTGCCGGGAGACTGCCAGTGGAGACGGAATCTGCCGCTTTGTCTGTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS CCA 90 bp TGCAGGCCCCATCTGTCTCACACGTGTAGTTGGCCTGGAGGCAGCTaGTGCACGCACACAGCAGAGCACAAATGTCAAGCTCTGTTCATA +
Preference number: 5 (lower is better)
Translates to: CRPHLSHTCSWPGGS*CTHTAEHKCQALFI
Trigger: TATGAACAGAGCTTGACATTTGTGCTCTGCTGTGTGCGTGCACCAGCTGCCTCCAGGCCAACTACACGTGTGAGACAGATGGGGCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542485.1
CDS-3UTR CAA 90 bp CAGAGGGCTGGGCAGAAACGAGAGGTAGGCCTCCATCGTACGCTCAACGCGGCATCCCCAAACCGACCCTaGCCAATAATCTCTTGTAAA +
Preference number: 5 (lower is better)
Translates to: QRAGQKREVGLHRTLNAASPNRP*PIISCK
Trigger: TTTACAAGAGATTATTGGCAAGGGTCGGTTTGGGGA...TGCCGCGTTGAGCGTACGATGGAGGCCTACCTCTCGTTTCTGCCCAGCCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR CAA 90 bp CTCAACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCCGTGTGGAGAGAGCACTTCACCCACATTaGTTGAATAAATGCCTGGAG +
Preference number: 5 (lower is better)
Translates to: LNAAAVRSSRCQELRVERALHPH*LNKCLE
Trigger: CTCCAGGCATTTATTCAACAAATGTGGGTGAAGTGC...TCTCTCCACACGGAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR CAA 90 bp TGGGAGCTTCCCAAAGACCTGCTCCATCTTCCCCAGAGGTGGAAGAGTTGGACTCCTCCTCCACAAGCTTaGGCAGAGAACTGCTGGGTT +
Preference number: 5 (lower is better)
Translates to: WELPKDLLHLPQRWKSWTPPPQA*AENCWV
Trigger: AACCCAGCAGTTCTCTGCCAAAGCTTGTGGAGGAGG...AGTCCAACTCTTCCACCTCTGGGGAAGATGGAGCAGGTCTTTGGGAAGCTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR CAA 90 bp TCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTGCTGGGGTCTCCCCACATaGCCCAGGTTTGTCTCGAAC +
Preference number: 5 (lower is better)
Translates to: SPHCPGLSRTSELKLSSCWGLPT*PRFVSN
Trigger: GTTCGAGACAAACCTGGGCAATGTGGGGAGACCCCA...GCAGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000426655.6
CDS-3UTR CAA 90 bp CTCAACGCGGCAGCTGTGCGTAGTTCTCGCTGCCAGGAGCTCCGTGTGGAGAGAGAGCAGTCTGCTTTATaGTCAGCAGCAATAAATCCA +
Preference number: 5 (lower is better)
Translates to: LNAAAVRSSRCQELRVEREQSAL*SAAINP
Trigger: TGGATTTATTGCTGCTGACAATAAAGCAGACTGCTC...TCTCTCCACACGGAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541224.5
CDS-3UTR CAA 90 bp CATGCACACACGGCTGGACAGACAAAGCGGCAGATTCCGTCTCCACTGGCAGTCTCCATCCCATCCAGATaGAAAATGGAAACCATGCAG +
Preference number: 5 (lower is better)
Translates to: HAHTAGQTKRQIPSPLAVSIPSR*KMETMQ
Trigger: CTGCATGGTTTCCATTTTCAATCTGGATGGGATGGA...GACTGCCAGTGGAGACGGAATCTGCCGCTTTGTCTGTCCAGCCGTGTGTGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR CAA 90 bp GCCTCAGGGCAAAGAGGAACTCTCACTGCTGAGTGGGAACAGGCTCAGGTGCAATGGAGCGTCTTGTCTTaGGAGAGACACATCTCACAT +
Preference number: 5 (lower is better)
Translates to: ASGQRGTLTAEWEQAQVQWSVLS*ERHISH
Trigger: ATGTGAGATGTGTCTCTCCAAAGACAAGACGCTCCA...TTGCACCTGAGCCTGTTCCCACTCAGCAGTGAGAGTTCCTCTTTGCCCTGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR CAA 90 bp GAAGGAGACCACTGCATGAATCCCGTGCTATGCGCACCGGGGCACTCCCCGCCAGTGCCATTATCTTTATaGTCAGCAGCAATAAATCCA +
Preference number: 5 (lower is better)
Translates to: EGDHCMNPVLCAPGHSPPVPLSL*SAAINP
Trigger: TGGATTTATTGCTGCTGACAATAAAGATAATGGCAC...TGGCGGGGAGTGCCCCGGTGCGCATAGCACGGGATTCATGCAGTGGTCTCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS-3UTR CAA 90 bp AACCCTCAGGGCAGCTTAGCACTGGCAACACCTCGGTTCCTCCGGCCCCTCCCAGTGCCATTATCTTTATaGTCAGCAGCAATAAATCCA +
Preference number: 5 (lower is better)
Translates to: NPQGSLALATPRFLRPLPVPLSL*SAAINP
Trigger: TGGATTTATTGCTGCTGACAATAAAGATAATGGCAC...TGGGAGGGGCCGGAGGAACCGAGGTGTTGCCAGTGCTAAGCTGCCCTGAGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR CAA 90 bp CGAGAGGTAGGCCTCCATCGTACGCTCAACGCGGCAGCTGTGCGTAGTTCTCGCTCACCAGAATGTTCTTaGACTTTAAGTCTCGATGAG +
Preference number: 5 (lower is better)
Translates to: REVGLHRTLNAAAVRSSRSPECS*TLSLDE
Trigger: CTCATCGAGACTTAAAGTCAAAGAACATTCTGGTGA...GCGAGAACTACGCACAGCTGCCGCGTTGAGCGTACGATGGAGGCCTACCTCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS CCA 90 bp CCATCACCCGCAGTGCCTCATAACTCTGCCACCAGTTGGGGATGTTaGGACGCAGCTTCTGATCACATACAACCTTTCGCATTTCCTCAA +
Preference number: 5 (lower is better)
Translates to: PSPAVPHNSATSWGC*DAASDHIQPFAFPQ
Trigger: TTGAGGAAATGCGAAAGGTTGTATGTGATCAGAAGCTGCGTCCCAACATCCCCAACTGGTGGCAGAGTTATGAGGCACTGCGGGTGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR CAA 90 bp AGGGTTTCCCATGAATGTGGCTTGGGAGCCACCGCGTTAGAATATACTGCTTCTAATTCCAGGCTTCCCTaGGGTGCCCACGATCTCCAT +
Preference number: 5 (lower is better)
Translates to: RVSHECGLGATALEYTASNSRLP*GAHDLH
Trigger: ATGGAGATCGTGGGCACCCAAGGGAAGCCTGGAATT...AGAAGCAGTATATTCTAACGCGGTGGCTCCCAAGCCACATTCATGGGAAACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS-3UTR CAA 90 bp TCTCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTAATTCCAGGCTTCCCTaGGGTGCCCACGATCTCCAT +
Preference number: 5 (lower is better)
Translates to: SPHIAQVCLELLSSSYLPNSRLP*GAHDLH
Trigger: ATGGAGATCGTGGGCACCCAAGGGAAGCCTGGAATT...AGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426655.6
CDS-3UTR CAA 90 bp GGTCCCCGAAGGAAACCCTCAGGGCAGCTTAGCACTGGCAACACCTCGGTTCCTCAGGCATCTACTTACTaGAATCAGCTCTTTTTACAG +
Preference number: 5 (lower is better)
Translates to: GPRRKPSGQLSTGNTSVPQASTY*NQLFLQ
Trigger: CTGTAAAAAGAGCTGATTCAAGTAAGTAGATGCCTG...AGGAACCGAGGTGTTGCCAGTGCTAAGCTGCCCTGAGGGTTTCCTTCGGGGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR CAA 90 bp GCACAGAAAGCTCAAGCAGGTAAGTGCGCACCTACAGACACACACACACACTCAGACGTAAGAACGGGCTaGGACTTGGTCTGTGAATCC +
Preference number: 5 (lower is better)
Translates to: AQKAQAGKCAPTDTHTHSDVRTG*DLVCES
Trigger: GGATTCACAGACCAAGTCCAAGCCCGTTCTTACGTC...TGAGTGTGTGTGTGTGTCTGTAGGTGCGCACTTACCTGCTTGAGCTTTCTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR CAA 90 bp TCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTGCCCACATTGCCCAGGTTaGTCTCGAACTTCTGAGCTC +
Preference number: 5 (lower is better)
Translates to: SPHCPGLSRTSELKLSSCPHCPG*SRTSEL
Trigger: GAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGG...GCAGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426655.6
CDS TCA 90 bp GACAAGATCCTGGAGCGTCTTGTCTTTGGAGAGACACATCTCACATaGGGGATCTTCCATGTCCAGTCTCTGGCGGTTGTGATAGACACG +
Preference number: 5 (lower is better)
Translates to: DKILERLVFGETHLT*GIFHVQSLAVVIDT
Trigger: CGTGTCTATCACAACCGCCAGAGACTGGACATGGAAGATCCCTCATGTGAGATGTGTCTCTCCAAAGACAAGACGCTCCAGGATCTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257963.9
ENST00000415850.6
ENST00000426655.6
ENST00000541224.5
ENST00000542485.1
CDS-3UTR CAA 90 bp GGAGCTTCCCAAAGACCTGCTCCATCTTCCCCAGAGGTGGAAGAGTTGGACTGTTCCATCCCATCCAGATaGAAAATGGAAACCATGCAG +
Preference number: 5 (lower is better)
Translates to: GASQRPAPSSPEVEELDCSIPSR*KMETMQ
Trigger: CTGCATGGTTTCCATTTTCAATCTGGATGGGATGGA...ACAGTCCAACTCTTCCACCTCTGGGGAAGATGGAGCAGGTCTTTGGGAAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR CAA 90 bp TCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTGCAGATCCTGGAGCGTCTaGTCTTTGGAGAGACACATC +
Preference number: 5 (lower is better)
Translates to: SPHCPGLSRTSELKLSSCRSWSV*SLERHI
Trigger: GATGTGTCTCTCCAAAGACAAGACGCTCCAGGATCT...GCAGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426655.6
CDS-3UTR CAA 90 bp CATGCACACACGGCTGGACAGACAAAGCGGCAGATTCCGTCTCCACTGGCAGTCTCACCAGAATGTTCTTaGACTTTAAGTCTCGATGAG +
Preference number: 5 (lower is better)
Translates to: HAHTAGQTKRQIPSPLAVSPECS*TLSLDE
Trigger: CTCATCGAGACTTAAAGTCAAAGAACATTCTGGTGA...GACTGCCAGTGGAGACGGAATCTGCCGCTTTGTCTGTCCAGCCGTGTGTGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257963.9
ENST00000542485.1
CDS-3UTR CAA 90 bp TCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTGCTGGACTCCTCCAGAATaGCATCTTCGAGCAATCTCC +
Preference number: 5 (lower is better)
Translates to: SPHCPGLSRTSELKLSSCWTPPE*HLRAIS
Trigger: GGAGATTGCTCGAAGATGCAATTCTGGAGGAGTCCA...GCAGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426655.6
CDS CCA 90 bp CTGAGGTGGAGAGATCGTAGACAAGATCCTGGAGCGTCTTGTCTTTaGAGAGACACATCTCACATGAGGGATCTTCCATGTCCAGTCTCT +
Preference number: 5 (lower is better)
Translates to: LRWRDRRQDPGASCL*RDTSHMRDLPCPVS
Trigger: AGAGACTGGACATGGAAGATCCCTCATGTGAGATGTGTCTCTCCAAAGACAAGACGCTCCAGGATCTTGTCTACGATCTCTCCACCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257963.9
ENST00000415850.6
ENST00000426655.6
ENST00000541224.5
ENST00000542485.1
CDS CCA 90 bp GAGGCCAGCTTCTTACCTCATAACTCTGCCACCAGTTGGGGATGTTaGGACGCAGCTTCTGATCACATACAACCTTTCGCATTTCCTCAA +
Preference number: 5 (lower is better)
Translates to: EASFLPHNSATSWGC*DAASDHIQPFAFPQ
Trigger: TTGAGGAAATGCGAAAGGTTGTATGTGATCAGAAGCTGCGTCCCAACATCCCCAACTGGTGGCAGAGTTATGAGGTAAGAAGCTGGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426655.6
CDS-3UTR CAA 90 bp TCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTGCTGGAGCGTCTTGTCTTaGGAGAGACACATCTCACAT +
Preference number: 5 (lower is better)
Translates to: SPHCPGLSRTSELKLSSCWSVLS*ERHISH
Trigger: ATGTGAGATGTGTCTCTCCAAAGACAAGACGCTCCA...GCAGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426655.6
CDS-3UTR CAA 90 bp AAACGAGAGGTAGGCCTCCATCGTACGCTCAACGCGGCAGCTGTGCGTAGTTCTTCACCAGAATGTTCTTaGACTTTAAGTCTCGATGAG +
Preference number: 5 (lower is better)
Translates to: KREVGLHRTLNAAAVRSSSPECS*TLSLDE
Trigger: CTCATCGAGACTTAAAGTCAAAGAACATTCTGGTGA...AGAACTACGCACAGCTGCCGCGTTGAGCGTACGATGGAGGCCTACCTCTCGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS-3UTR CAA 90 bp GAATGTGGCTTGGGAGCCACCGCGTTAGAATATACTGCTTCTGATGTGAAGGAGAAGGTACCTCCAGAATaGCATCTTCGAGCAATCTCC +
Preference number: 5 (lower is better)
Translates to: ECGLGATALEYTASDVKEKVPPE*HLRAIS
Trigger: GGAGATTGCTCGAAGATGCAATTCTGGAGGTACCTT...CTCCTTCACATCAGAAGCAGTATATTCTAACGCGGTGGCTCCCAAGCCACATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS-3UTR CAA 90 bp TCTCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTTCCATCCCATCCAGATaGAAAATGGAAACCATGCAG +
Preference number: 5 (lower is better)
Translates to: SPHIAQVCLELLSSSYLPSIPSR*KMETMQ
Trigger: CTGCATGGTTTCCATTTTCAATCTGGATGGGATGGA...AGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426655.6
CDS-3UTR CAA 90 bp GTTTCCCATGAATGTGGCTTGGGAGCCACCGCGTTAGAATATACTGCTTCTGATTGGAGCGTCTTGTCTTaGGAGAGACACATCTCACAT +
Preference number: 5 (lower is better)
Translates to: VSHECGLGATALEYTASDWSVLS*ERHISH
Trigger: ATGTGAGATGTGTCTCTCCAAAGACAAGACGCTCCA...ATCAGAAGCAGTATATTCTAACGCGGTGGCTCCCAAGCCACATTCATGGGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS-3UTR CAA 90 bp TCTCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTTCCCCAAACCGACCCTaGCCAATAATCTCTTGTAAA +
Preference number: 5 (lower is better)
Translates to: SPHIAQVCLELLSSSYLPSPNRP*PIISCK
Trigger: TTTACAAGAGATTATTGGCAAGGGTCGGTTTGGGGA...AGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426655.6
CDS CCA 90 bp TGGGACGCAGCTTCTGATCACATACAACCTTTCGCATTTCCTCAATaGAAGGGTCAGAGGGCACTAAGTCGTAATATGGCAGCTGATATT +
Preference number: 5 (lower is better)
Translates to: WDAASDHIQPFAFPQ*KGQRALSRNMAADI
Trigger: AATATCAGCTGCCATATTACGACTTAGTGCCCTCTGACCCTTCCATTGAGGAAATGCGAAAGGTTGTATGTGATCAGAAGCTGCGTCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257963.9
ENST00000426655.6
ENST00000541224.5
ENST00000542485.1
ENST00000563121.1
CDS-3UTR CAA 90 bp GTTTCCCATGAATGTGGCTTGGGAGCCACCGCGTTAGAATATACTGCTTCTGATTCCATCCCATCCAGATaGAAAATGGAAACCATGCAG +
Preference number: 5 (lower is better)
Translates to: VSHECGLGATALEYTASDSIPSR*KMETMQ
Trigger: CTGCATGGTTTCCATTTTCAATCTGGATGGGATGGA...ATCAGAAGCAGTATATTCTAACGCGGTGGCTCCCAAGCCACATTCATGGGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS-3UTR CAA 90 bp CGGCTTCAGTTTCTCCCCAACTCTCACTTAGTGTTAAGAGTGGCAGAGGTGGGTGTGCCATTATCTTTATaGTCAGCAGCAATAAATCCA +
Preference number: 5 (lower is better)
Translates to: RLQFLPNSHLVLRVAEVGVPLSL*SAAINP
Trigger: TGGATTTATTGCTGCTGACAATAAAGATAATGGCAC...ACCCACCTCTGCCACTCTTAACACTAAGTGAGAGTTGGGGAGAAACTGAAGCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257963.9
CDS-3UTR CAA 90 bp TCTCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTTCACCAGAATGTTCTTaGACTTTAAGTCTCGATGAG +
Preference number: 5 (lower is better)
Translates to: SPHIAQVCLELLSSSYLPSPECS*TLSLDE
Trigger: CTCATCGAGACTTAAAGTCAAAGAACATTCTGGTGA...AGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426655.6
CDS TCA 90 bp AGCCTTCAGAATGGTTACCATAACACACAACGCTATTCAACAAACTaGTCCCTGAAGAATAAACGCACCCTAAGCACAGCTACCTCCACA +
Preference number: 5 (lower is better)
Translates to: SLQNGYHNTQRYSTN*SLKNKRTLSTATST
Trigger: TGTGGAGGTAGCTGTGCTTAGGGTGCGTTTATTCTTCAGGGATCAGTTTGTTGAATAGCGTTGTGTGTTATGGTAACCATTCTGAAGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS-3UTR CAA 90 bp TCTCCCCACATTGCCCAGGTTTGTCTCGAACTTCTGAGCTCAAGCTATCTTCCTGTGCCATTATCTTTATaGTCAGCAGCAATAAATCCA +
Preference number: 5 (lower is better)
Translates to: SPHIAQVCLELLSSSYLPVPLSL*SAAINP
Trigger: TGGATTTATTGCTGCTGACAATAAAGATAATGGCAC...AGGAAGATAGCTTGAGCTCAGAAGTTCGAGACAAACCTGGGCAATGTGGGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426655.6
CDS-3UTR CAA 90 bp GTTTCCCATGAATGTGGCTTGGGAGCCACCGCGTTAGAATATACTGCTTCTGATTCACCAGAATGTTCTTaGACTTTAAGTCTCGATGAG +
Preference number: 5 (lower is better)
Translates to: VSHECGLGATALEYTASDSPECS*TLSLDE
Trigger: CTCATCGAGACTTAAAGTCAAAGAACATTCTGGTGA...ATCAGAAGCAGTATATTCTAACGCGGTGGCTCCCAAGCCACATTCATGGGAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS TCA 72 bp TTCGGGGCAATGTCAATGGTGTCAGTGACTGCATCATaGCGGACAGCCAGGCCCAGGTCTGCTATGGCACAC +
Preference number: 6 (lower is better)
Translates to: FGAMSMVSVTAS*RTARPRSAMAH
Trigger: GTGTGCCATAGCAGACCTGGGCCTGGCTGTCCGTCATGATGCAGTCACTGACACCATTGACATTGCCCCGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257963.9
ENST00000415850.6
ENST00000426655.6
ENST00000541224.5
ENST00000542485.1
ENST00000563121.1
CDS CCA 72 bp GGACAAAGAGGGGTAACCCTGAGCCAGACCCTGAGGTaGAGAGATCGTAGACAAGATCCTGGAGCGTCTTGT +
Preference number: 6 (lower is better)
Translates to: GQRGVTLSQTLR*RDRRQDPGASC
Trigger: ACAAGACGCTCCAGGATCTTGTCTACGATCTCTCCACCTCAGGGTCTGGCTCAGGGTTACCCCTCTTTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257963.9
ENST00000415850.6
ENST00000426655.6
ENST00000541224.5
ENST00000542485.1
CDS CCA 72 bp ATCTCTTGTAAAACGATGGTTCGGGCCACTGTGCGCTaGACAAAGAGGGGTAACCCTGAGCCAGACCCTGAG +
Preference number: 6 (lower is better)
Translates to: ISCKTMVRATVR*TKRGNPEPDPE
Trigger: CTCAGGGTCTGGCTCAGGGTTACCCCTCTTTGTCCAGCGCACAGTGGCCCGAACCATCGTTTTACAAGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257963.9
ENST00000415850.6
ENST00000426655.6
ENST00000541224.5
ENST00000542485.1
CDS CCA 72 bp CATCTGTCTCACACGTGTAGTTGGCCTGGAGGCAGCTaGTGCACGCACACAGCAGAGCACAAATGTCAAGCT +
Preference number: 6 (lower is better)
Translates to: HLSHTCSWPGGS*CTHTAEHKCQA
Trigger: AGCTTGACATTTGTGCTCTGCTGTGTGCGTGCACCAGCTGCCTCCAGGCCAACTACACGTGTGAGACAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542485.1
CDS CAA 90 bp GCTCTTCCCCTTCCTCCCTTGTATTGGAGTCTAAGGCTCCTCAGCTaGGGGGCAGCAGAGACCATTACAACTTCCCATGGCAATGTGAGG +
Preference number: 6 (lower is better)
Translates to: ALPLPPLYWSLRLLS*GAAETITTSHGNVR
Trigger: CCTCACATTGCCATGGGAAGTTGTAATGGTCTCTGCTGCCCCCAAGCTGAGGAGCCTTAGACTCCAATACAAGGGAGGAAGGGGAAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541224.5
CDS TCA 72 bp TGCAGGTGCGCACATGGTGCTCCATCCCATCCAGATTaGAAATGGAAACCATGCAGGCCCCATCTGTCTCAC +
Preference number: 6 (lower is better)
Translates to: CRCAHGAPSHPD*KWKPCRPHLSH
Trigger: GTGAGACAGATGGGGCCTGCATGGTTTCCATTTTCAATCTGGATGGGATGGAGCACCATGTGCGCACCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257963.9
ENST00000415850.6
ENST00000426655.6
ENST00000536420.5
ENST00000541224.5
ENST00000542485.1
CDS CCA 72 bp CCATCACCCGCAGTGCCTCATAACTCTGCCACCAGTTaGGGATGTTGGGACGCAGCTTCTGATCACATACAA +
Preference number: 6 (lower is better)
Translates to: PSPAVPHNSATS*GCWDAASDHIQ
Trigger: TTGTATGTGATCAGAAGCTGCGTCCCAACATCCCCAACTGGTGGCAGAGTTATGAGGCACTGCGGGTGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS TCA 72 bp CTGGAGCGTCTTGTCTTTGGAGAGACACATCTCACATaGGGGATCTTCCATGTCCAGTCTCTGGCGGTTGTG +
Preference number: 6 (lower is better)
Translates to: LERLVFGETHLT*GIFHVQSLAVV
Trigger: CACAACCGCCAGAGACTGGACATGGAAGATCCCTCATGTGAGATGTGTCTCTCCAAAGACAAGACGCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257963.9
ENST00000415850.6
ENST00000426655.6
ENST00000541224.5
ENST00000542485.1
CDS GCA 72 bp ACCAGCTCCACTTTGGGGATGCAGGTGCGCACATGGTaGTCCATCCCATCCAGATTGAAAATGGAAACCATG +
Preference number: 6 (lower is better)
Translates to: TSSTLGMQVRTW*SIPSRLKMETM
Trigger: CATGGTTTCCATTTTCAATCTGGATGGGATGGAGCACCATGTGCGCACCTGCATCCCCAAAGTGGAGCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257963.9
ENST00000415850.6
ENST00000426655.6
ENST00000536420.5
ENST00000541224.5
ENST00000542485.1
CDS CCA 72 bp GCAGTGCCTCATAACTCTGCCACCAGTTGGGGATGTTaGGACGCAGCTTCTGATCACATACAACCTTTCGCA +
Preference number: 6 (lower is better)
Translates to: AVPHNSATSWGC*DAASDHIQPFA
Trigger: TGCGAAAGGTTGTATGTGATCAGAAGCTGCGTCCCAACATCCCCAACTGGTGGCAGAGTTATGAGGCACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257963.9
ENST00000541224.5
ENST00000542485.1
CDS TCA 72 bp GATATTCTTCATGGACTCCGTTTGGTCCCCACCCTCTaGTTCGGGGCAATGTCAATGGTGTCAGTGACTGCA +
Preference number: 6 (lower is better)
Translates to: DILHGLRLVPTL*FGAMSMVSVTA
Trigger: TGCAGTCACTGACACCATTGACATTGCCCCGAATCAGAGGGTGGGGACCAAACGGAGTCCATGAAGAATATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563121.1
CDS TCA 72 bp CTCTGCCACCAGTTGGGGATGTTGGGACGCAGCTTCTaGTCACATACAACCTTTCGCATTTCCTCAATGGAA +
Preference number: 6 (lower is better)
Translates to: LCHQLGMLGRSF*SHTTFRISSME
Trigger: TTCCATTGAGGAAATGCGAAAGGTTGTATGTGATCAGAAGCTGCGTCCCAACATCCCCAACTGGTGGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257963.9
ENST00000426655.6
ENST00000541224.5
ENST00000542485.1
ENST00000563121.1
CDS TCA 72 bp AGCTACCTCCACACCTTTGATGGCAACCTTAAACGATaGTTCAGGCTCTGGCAACAGGCATCCAACAGGTTG +
Preference number: 6 (lower is better)
Translates to: SYLHTFDGNLKR*FRLWQQASNRL
Trigger: CAACCTGTTGGATGCCTGTTGCCAGAGCCTGAATCATCGTTTAAGGTTGCCATCAAAGGTGTGGAGGTAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS CAA 90 bp TCCCTGAAGAATAAACGCACCCTAAGCACAGCTACCTCCACACCTTaGATGGCAACCTTAAACGATGATTCAGGCTCTGGCAACAGGCAT +
Preference number: 6 (lower is better)
Translates to: SLKNKRTLSTATSTP*MATLNDDSGSGNRH
Trigger: ATGCCTGTTGCCAGAGCCTGAATCATCGTTTAAGGTTGCCATCAAAGGTGTGGAGGTAGCTGTGCTTAGGGTGCGTTTATTCTTCAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS TCA 72 bp GGGCAGCAGAGACCATTACAACTTCCCATGGCAATGTaGGGAATGAGCAGTCTGCTTTATTGTCAGCAGCAA +
Preference number: 6 (lower is better)
Translates to: GQQRPLQLPMAM*GMSSLLYCQQQ
Trigger: TTGCTGCTGACAATAAAGCAGACTGCTCATTCCTCACATTGCCATGGGAAGTTGTAATGGTCTCTGCTGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541224.5
CDS CCA 72 bp TTCTTACCTCATAACTCTGCCACCAGTTGGGGATGTTaGGACGCAGCTTCTGATCACATACAACCTTTCGCA +
Preference number: 6 (lower is better)
Translates to: FLPHNSATSWGC*DAASDHIQPFA
Trigger: TGCGAAAGGTTGTATGTGATCAGAAGCTGCGTCCCAACATCCCCAACTGGTGGCAGAGTTATGAGGTAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426655.6
CDS CAA 72 bp AATAAACGCACCCTAAGCACAGCTACCTCCACACCTTaGATGGCAACCTTAAACGATGATTCAGGCTCTGGC +
Preference number: 6 (lower is better)
Translates to: NKRTLSTATSTP*MATLNDDSGSG
Trigger: GCCAGAGCCTGAATCATCGTTTAAGGTTGCCATCAAAGGTGTGGAGGTAGCTGTGCTTAGGGTGCGTTTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415850.6
CDS CCA 72 bp AGAGATCGTAGACAAGATCCTGGAGCGTCTTGTCTTTaGAGAGACACATCTCACATGAGGGATCTTCCATGT +
Preference number: 6 (lower is better)
Translates to: RDRRQDPGASCL*RDTSHMRDLPC
Trigger: ACATGGAAGATCCCTCATGTGAGATGTGTCTCTCCAAAGACAAGACGCTCCAGGATCTTGTCTACGATCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257963.9
ENST00000415850.6
ENST00000426655.6
ENST00000541224.5
ENST00000542485.1
CDS CCA 72 bp GCTTCTGATCACATACAACCTTTCGCATTTCCTCAATaGAAGGGTCAGAGGGCACTAAGTCGTAATATGGCA +
Preference number: 6 (lower is better)
Translates to: ASDHIQPFAFPQ*KGQRALSRNMA
Trigger: TGCCATATTACGACTTAGTGCCCTCTGACCCTTCCATTGAGGAAATGCGAAAGGTTGTATGTGATCAGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257963.9
ENST00000426655.6
ENST00000541224.5
ENST00000542485.1
ENST00000563121.1