Pregenerated sensors for ACTRT3 (Homo sapiens)
Ensembl gene IDs: ENSG00000184378Ensembl transcript IDs: ENST00000330368.3
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCTTGCCTGGATATCTGCGCTCCATCCCAATGCCACCCCTTCCATaGTGGCATACCTCTGCTATGGAGTCTCGTTCCTCACCACAGCAA | + |
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Preference number: 1 (lower is better) Translates to: CLPGYLRSIPMPPLP*WHTSAMESRSSPQQ Trigger: TTGCTGTGGTGAGGAACGAGACTCCATAGCAGAGGTATGCCATCATGGAAGGGGTGGCATTGGGATGGAGCGCAGATATCCAGGCAAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| 3UTR CCA 90 bp | GCTCCATCCCAATGCCACCCCTTCCATGATGGCATACCTCTGCTATaGAGTCTCGTTCCTCACCACAGCAACCTTCTTTCCCTAAACTTC | + |
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Preference number: 1 (lower is better) Translates to: APSQCHPFHDGIPLL*SLVPHHSNLLSLNF Trigger: GAAGTTTAGGGAAAGAAGGTTGCTGTGGTGAGGAACGAGACTCCATAGCAGAGGTATGCCATCATGGAAGGGGTGGCATTGGGATGGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| 3UTR GCA 90 bp | TATGCTTTGTTCATTCTCATCTTTAGCAACTTGTTCATTTTAGTATaGTTGCCTGGATATCTGCGCTCCATCCCAATGCCACCCCTTCCA | + |
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Preference number: 1 (lower is better) Translates to: YALFILIFSNLFILV*LPGYLRSIPMPPLP Trigger: TGGAAGGGGTGGCATTGGGATGGAGCGCAGATATCCAGGCAAGCATACTAAAATGAACAAGTTGCTAAAGATGAGAATGAACAAAGCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| 3UTR-3UTR TCA 90 bp | GATGGCATACCTCTGCTATGGAGTCTCGTTCCTCACCACAGCAACCTTCTTTCCATAGACATCTGTTCTTaGGCTTCACCATTATTATCC | + |
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Preference number: 2 (lower is better) Translates to: DGIPLLWSLVPHHSNLLSIDICS*ASPLLS Trigger: GGATAATAATGGTGAAGCTCAAGAACAGATGTCTAT...GGAAAGAAGGTTGCTGTGGTGAGGAACGAGACTCCATAGCAGAGGTATGCCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| 3UTR-3UTR CCA 90 bp | CCTCTGCTATGGAGTCTCGTTCCTCACCACAGCAACCTTCTTTCCCTAAACTTCATCTTATCACTCATTTaGCACATAGCATATTGTACC | + |
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Preference number: 2 (lower is better) Translates to: PLLWSLVPHHSNLLSLNFILSLI*HIAYCT Trigger: GGTACAATATGCTATGTGCCAAATGAGTGATAAGAT...GAAGTTTAGGGAAAGAAGGTTGCTGTGGTGAGGAACGAGACTCCATAGCAGAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| 3UTR TCA 72 bp | GGATATCTGCGCTCCATCCCAATGCCACCCCTTCCATaGTGGCATACCTCTGCTATGGAGTCTCGTTCCTCA | + |
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Preference number: 3 (lower is better) Translates to: GYLRSIPMPPLP*WHTSAMESRSS Trigger: TGAGGAACGAGACTCCATAGCAGAGGTATGCCATCATGGAAGGGGTGGCATTGGGATGGAGCGCAGATATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| 3UTR GCA 72 bp | CATCCCAATGCCACCCCTTCCATGATGGCATACCTCTaGTATGGAGTCTCGTTCCTCACCACAGCAACCTTC | + |
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Preference number: 3 (lower is better) Translates to: HPNATPSMMAYL*YGVSFLTTATF Trigger: GAAGGTTGCTGTGGTGAGGAACGAGACTCCATAGCAGAGGTATGCCATCATGGAAGGGGTGGCATTGGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| 3UTR CCA 72 bp | CAATGCCACCCCTTCCATGATGGCATACCTCTGCTATaGAGTCTCGTTCCTCACCACAGCAACCTTCTTTCC | + |
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Preference number: 3 (lower is better) Translates to: QCHPFHDGIPLL*SLVPHHSNLLS Trigger: GGAAAGAAGGTTGCTGTGGTGAGGAACGAGACTCCATAGCAGAGGTATGCCATCATGGAAGGGGTGGCATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| 3UTR-3UTR CAA 90 bp | ATGATGGCATACCTCTGCTATGGAGTCTCGTTCCTCACCACAGCAACCTTCTTTTTGGCACATAGCATATaGTACCACAAATGCTCTCTT | + |
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Preference number: 3 (lower is better) Translates to: MMAYLCYGVSFLTTATFFLAHSI*YHKCSL Trigger: AAGAGAGCATTTGTGGTACAATATGCTATGTGCCAA...AAAGAAGGTTGCTGTGGTGAGGAACGAGACTCCATAGCAGAGGTATGCCATCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR CCA 90 bp | TGCCACCCCTTCCATGATGGCATACCTCTGCTATGGAGTCTCGTTCCTCACCACTGGGCCGCGCGGCTCTaGCCCTTGGCGCGGCCGATA | + |
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Preference number: 4 (lower is better) Translates to: CHPFHDGIPLLWSLVPHHWAARL*PLARPI Trigger: TATCGGCCGCGCCAAGGGCCAGAGCCGCGCGGCCCA...GTGGTGAGGAACGAGACTCCATAGCAGAGGTATGCCATCATGGAAGGGGTGGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR CCA 90 bp | CTTGCCTGGATATCTGCGCTCCATCCCAATGCCACCCCTTCCATGATGGCATACAGTTCTAGCCCGCCCTaGGCCGCGCGGCTCTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: LAWISALHPNATPSMMAYSSSPP*AARLWP Trigger: GGGCCAGAGCCGCGCGGCCCAGGGCGGGCTAGAACT...GTATGCCATCATGGAAGGGGTGGCATTGGGATGGAGCGCAGATATCCAGGCAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR GCA 90 bp | TGGATATCTGCGCTCCATCCCAATGCCACCCCTTCCATGATGGCATACCTCTGCTCATGCCGCCGCTGCTaGCGCCGCCTCCTGTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: WISALHPNATPSMMAYLCSCRRC*RRLLSL Trigger: CAGAGACAGGAGGCGGCGGCAGCAGCGGCGGCATGA...GCAGAGGTATGCCATCATGGAAGGGGTGGCATTGGGATGGAGCGCAGATATCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR TCA 90 bp | ACCCCTTCCATGATGGCATACCTCTGCTATGGAGTCTCGTTCCTCACCACAGCAGAGCTCCTCCAGTCCTaGGCTTGGTCGCCCACGCAG | + |
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Preference number: 4 (lower is better) Translates to: TPSMMAYLCYGVSFLTTAELLQS*AWSPTQ Trigger: CTGCGTGGGCGACCAAGCTCAGGACTGGAGGAGCTC...TGCTGTGGTGAGGAACGAGACTCCATAGCAGAGGTATGCCATCATGGAAGGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR CCA 90 bp | CCCAATGCCACCCCTTCCATGATGGCATACCTCTGCTATGGAGTCTCGTTCCTCACCGGTAGCTGGCAGTaGTTCATGCCGCCGCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: PNATPSMMAYLCYGVSFLTGSWQ*FMPPLL Trigger: CAGCAGCGGCGGCATGAACCACTGCCAGCTACCGGT...GAGGAACGAGACTCCATAGCAGAGGTATGCCATCATGGAAGGGGTGGCATTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR TCA 90 bp | ACCCCTTCCATGATGGCATACCTCTGCTATGGAGTCTCGTTCCTCACCACAGCACAGCCACGCCCGCCTTaGTCATTCCCGAGCCGTTGT | + |
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Preference number: 4 (lower is better) Translates to: TPSMMAYLCYGVSFLTTAQPRPP*SFPSRC Trigger: ACAACGGCTCGGGAATGATCAAGGCGGGCGTGGCTG...TGCTGTGGTGAGGAACGAGACTCCATAGCAGAGGTATGCCATCATGGAAGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR GCA 90 bp | CCCAATGCCACCCCTTCCATGATGGCATACCTCTGCTATGGAGTCTCGTTCCTCGGTGAGGTCAAGGCCTaGCAGATCCAGTTGCTGCAC | + |
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Preference number: 4 (lower is better) Translates to: PNATPSMMAYLCYGVSFLGEVKA*QIQLLH Trigger: GTGCAGCAACTGGATCTGGCAGGCCTTGACCTCACC...GAGGAACGAGACTCCATAGCAGAGGTATGCCATCATGGAAGGGGTGGCATTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR GCA 90 bp | CTTGCCTGGATATCTGCGCTCCATCCCAATGCCACCCCTTCCATGATGGCATACTGCGCTCCATCCCAATaGCACCCCTTCCATGATGGC | + |
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Preference number: 4 (lower is better) Translates to: LAWISALHPNATPSMMAYCAPSQ*HPFHDG Trigger: GCCATCATGGAAGGGGTGGCATTGGGATGGAGCGCA...GTATGCCATCATGGAAGGGGTGGCATTGGGATGGAGCGCAGATATCCAGGCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR GCA 90 bp | TGGATATCTGCGCTCCATCCCAATGCCACCCCTTCCATGATGGCATACCTCTGCGCTTGCCTGGATATCTaGGCTCCATCCCAATGCCAC | + |
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Preference number: 4 (lower is better) Translates to: WISALHPNATPSMMAYLCACLDI*APSQCH Trigger: GTGGCATTGGGATGGAGCGCAGATATCCAGGCAAGC...GCAGAGGTATGCCATCATGGAAGGGGTGGCATTGGGATGGAGCGCAGATATCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR CCA 90 bp | GATGGCATACCTCTGCTATGGAGTCTCGTTCCTCACCACAGCAACCTTCTTTCCATCACCACCGGTAGCTaGCAGTGGTTCATGCCGCCG | + |
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Preference number: 4 (lower is better) Translates to: DGIPLLWSLVPHHSNLLSITTGS*QWFMPP Trigger: CGGCGGCATGAACCACTGCCAGCTACCGGTGGTGAT...GGAAAGAAGGTTGCTGTGGTGAGGAACGAGACTCCATAGCAGAGGTATGCCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR CCA 90 bp | ATATCTGCGCTCCATCCCAATGCCACCCCTTCCATGATGGCATACCTCTGCTATTTGCCGGTTGGCCAGTaGGTTCAGCGCTGGCTCAGT | + |
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Preference number: 4 (lower is better) Translates to: ISALHPNATPSMMAYLCYLPVGQ*VQRWLS Trigger: ACTGAGCCAGCGCTGAACCCACTGGCCAACCGGCAA...ATAGCAGAGGTATGCCATCATGGAAGGGGTGGCATTGGGATGGAGCGCAGATAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR TCA 90 bp | TGCCACCCCTTCCATGATGGCATACCTCTGCTATGGAGTCTCGTTCCTCACCACACCAGGGAAAGAGGTTaGTCCCCCGGCAAGGATAAT | + |
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Preference number: 4 (lower is better) Translates to: CHPFHDGIPLLWSLVPHHTRERG*SPGKDN Trigger: ATTATCCTTGCCGGGGGATCAACCTCTTTCCCTGGT...GTGGTGAGGAACGAGACTCCATAGCAGAGGTATGCCATCATGGAAGGGGTGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR TCA 90 bp | GATGGCATACCTCTGCTATGGAGTCTCGTTCCTCACCACAGCAACCTTCTTTCCGGTAACCCCAGCACCTaGATTCAGCACAAGGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: DGIPLLWSLVPHHSNLLSGNPST*IQHKAS Trigger: ACTGGCCTTGTGCTGAATTCAGGTGCTGGGGTTACC...GGAAAGAAGGTTGCTGTGGTGAGGAACGAGACTCCATAGCAGAGGTATGCCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR GCA 90 bp | AATGCCACCCCTTCCATGATGGCATACCTCTGCTATGGAGTCTCGTTCCTCACCATTTCCGTGATCTGTTaGCGGTTGGCCAGTGGGTTC | + |
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Preference number: 4 (lower is better) Translates to: NATPSMMAYLCYGVSFLTISVIC*RLASGF Trigger: GAACCCACTGGCCAACCGGCAACAGATCACGGAAAT...GGTGAGGAACGAGACTCCATAGCAGAGGTATGCCATCATGGAAGGGGTGGCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR CCA 90 bp | ACCCCTTCCATGATGGCATACCTCTGCTATGGAGTCTCGTTCCTCACCACAGCAAGCTGGTCATGGAGCTaGATGACCTTCCCATCAGGT | + |
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Preference number: 4 (lower is better) Translates to: TPSMMAYLCYGVSFLTTASWSWS*MTFPSG Trigger: ACCTGATGGGAAGGTCATCCAGCTCCATGACCAGCT...TGCTGTGGTGAGGAACGAGACTCCATAGCAGAGGTATGCCATCATGGAAGGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR CCA 90 bp | CTTGCCTGGATATCTGCGCTCCATCCCAATGCCACCCCTTCCATGATGGCATACGAAAAGAGCTGGTCATaGAGCTGGATGACCTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: LAWISALHPNATPSMMAYEKSWS*SWMTFP Trigger: TGGGAAGGTCATCCAGCTCCATGACCAGCTCTTTTC...GTATGCCATCATGGAAGGGGTGGCATTGGGATGGAGCGCAGATATCCAGGCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR CCA 90 bp | ACCCCTTCCATGATGGCATACCTCTGCTATGGAGTCTCGTTCCTCACCACAGCACTCAGTAATCAAGACTaGGCCATCACACGGCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: TPSMMAYLCYGVSFLTTALSNQD*AITRLQ Trigger: CTGAAGCCGTGTGATGGCCCAGTCTTGATTACTGAG...TGCTGTGGTGAGGAACGAGACTCCATAGCAGAGGTATGCCATCATGGAAGGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR GCA 90 bp | AATGCCACCCCTTCCATGATGGCATACCTCTGCTATGGAGTCTCGTTCCTCACCATGATGGCATACCTCTaGTATGGAGTCTCGTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: NATPSMMAYLCYGVSFLTMMAYL*YGVSFL Trigger: GAGGAACGAGACTCCATAGCAGAGGTATGCCATCAT...GGTGAGGAACGAGACTCCATAGCAGAGGTATGCCATCATGGAAGGGGTGGCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR CCA 90 bp | CCTCTGCTATGGAGTCTCGTTCCTCACCACAGCAACCTTCTTTCCCTAAACTTCGAGACCACGCTCCACTaGGTAACTGATGAACAGCGA | + |
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Preference number: 4 (lower is better) Translates to: PLLWSLVPHHSNLLSLNFETTLH*VTDEQR Trigger: TCGCTGTTCATCAGTTACCCAGTGGAGCGTGGTCTC...GAAGTTTAGGGAAAGAAGGTTGCTGTGGTGAGGAACGAGACTCCATAGCAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR CCA 90 bp | GTTCATTTTAGTATGCTTGCCTGGATATCTGCGCTCCATCCCAATGCCACCCCTCAGTGGGTTCAGCGCTaGCTCAGTAATCAAGACTGG | + |
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Preference number: 4 (lower is better) Translates to: VHFSMLAWISALHPNATPQWVQR*LSNQDW Trigger: CCAGTCTTGATTACTGAGCCAGCGCTGAACCCACTG...AGGGGTGGCATTGGGATGGAGCGCAGATATCCAGGCAAGCATACTAAAATGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR TCA 90 bp | ATGATGGCATACCTCTGCTATGGAGTCTCGTTCCTCACCACAGCAACCTTCTTTCTCCATGTCCTCCCATaGAGTAATGAGACCACGCTC | + |
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Preference number: 4 (lower is better) Translates to: MMAYLCYGVSFLTTATFFLHVLP*SNETTL Trigger: GAGCGTGGTCTCATTACTTCATGGGAGGACATGGAG...AAAGAAGGTTGCTGTGGTGAGGAACGAGACTCCATAGCAGAGGTATGCCATCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR TCA 90 bp | ATGATGGCATACCTCTGCTATGGAGTCTCGTTCCTCACCACAGCAACCTTCTTTGGTCATGGAGCTGGATaGCCTTCCCATCAGGTAGTT | + |
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Preference number: 4 (lower is better) Translates to: MMAYLCYGVSFLTTATFFGHGAG*PSHQVV Trigger: AACTACCTGATGGGAAGGTCATCCAGCTCCATGACC...AAAGAAGGTTGCTGTGGTGAGGAACGAGACTCCATAGCAGAGGTATGCCATCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR TCA 90 bp | TTGTTCATTTTAGTATGCTTGCCTGGATATCTGCGCTCCATCCCAATGCCACCCATGCCACCCCTTCCATaGTGGCATACCTCTGCTATG | + |
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Preference number: 4 (lower is better) Translates to: LFILVCLPGYLRSIPMPPMPPLP*WHTSAM Trigger: CATAGCAGAGGTATGCCATCATGGAAGGGGTGGCAT...GGGTGGCATTGGGATGGAGCGCAGATATCCAGGCAAGCATACTAAAATGAACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR CCA 90 bp | CCTCTGCTATGGAGTCTCGTTCCTCACCACAGCAACCTTCTTTCCCTAAACTTCTTTAGTATGCTTGCCTaGATATCTGCGCTCCATCCC | + |
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Preference number: 4 (lower is better) Translates to: PLLWSLVPHHSNLLSLNFFSMLA*ISALHP Trigger: GGGATGGAGCGCAGATATCCAGGCAAGCATACTAAA...GAAGTTTAGGGAAAGAAGGTTGCTGTGGTGAGGAACGAGACTCCATAGCAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR TCA 90 bp | TGCCACCCCTTCCATGATGGCATACCTCTGCTATGGAGTCTCGTTCCTCACCACATAGACATCTGTTCTTaGGCTTCACCATTATTATCC | + |
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Preference number: 4 (lower is better) Translates to: CHPFHDGIPLLWSLVPHHIDICS*ASPLLS Trigger: GGATAATAATGGTGAAGCTCAAGAACAGATGTCTAT...GTGGTGAGGAACGAGACTCCATAGCAGAGGTATGCCATCATGGAAGGGGTGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR TCA 90 bp | GTTCTACTCAATAGACATCTGTTCTTGAGCTTCACCATTATTATCCCCCAAACCGCCTCAAGGTTCATATaGCACGGAGAGAAGAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: VLLNRHLFLSFTIIIPQTASRFI*HGEKRA Trigger: GGCCCTCTTCTCTCCGTGTCATATGAACCTTGAGGC...GGTTTGGGGGATAATAATGGTGAAGCTCAAGAACAGATGTCTATTGAGTAGAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR GCA 90 bp | AATGCCACCCCTTCCATGATGGCATACCTCTGCTATGGAGTCTCGTTCCTCACCAACTTCTTTAAATTCTaGAGCAGTGATCCACATGTC | + |
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Preference number: 4 (lower is better) Translates to: NATPSMMAYLCYGVSFLTNFFKF*SSDPHV Trigger: GACATGTGGATCACTGCTGCAGAATTTAAAGAAGTT...GGTGAGGAACGAGACTCCATAGCAGAGGTATGCCATCATGGAAGGGGTGGCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR CCA 90 bp | GATGGCATACCTCTGCTATGGAGTCTCGTTCCTCACCACAGCAACCTTCTTTCCTTTCAGAAGCATCTTTaGTGTACTATGTTGGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: DGIPLLWSLVPHHSNLLSFQKHL*CTMLGP Trigger: TGGACCCAACATAGTACACCAAAGATGCTTCTGAAA...GGAAAGAAGGTTGCTGTGGTGAGGAACGAGACTCCATAGCAGAGGTATGCCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR GCA 90 bp | CTTATCACTCATTTGGCACATAGCATATTGTACCACAAATGCTCTCTTCCAAGGGGAGGAGCTATAACTTaGACAGCGGTGTTGGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: LITHLAHSILYHKCSLPRGGAIT*TAVLAG Trigger: TCCTGCCAACACCGCTGTGCAAGTTATAGCTCCTCC...CCTTGGAAGAGAGCATTTGTGGTACAATATGCTATGTGCCAAATGAGTGATAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR TCA 90 bp | ATGATGGCATACCTCTGCTATGGAGTCTCGTTCCTCACCACAGCAACCTTCTTTAACAATCTTTCTGTCTaGAGCACTGAGCAACATGAT | + |
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Preference number: 4 (lower is better) Translates to: MMAYLCYGVSFLTTATFFNNLSV*STEQHD Trigger: ATCATGTTGCTCAGTGCTTCAGACAGAAAGATTGTT...AAAGAAGGTTGCTGTGGTGAGGAACGAGACTCCATAGCAGAGGTATGCCATCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR GCA 90 bp | CTATGGAGTCTCGTTCCTCACCACAGCAACCTTCTTTCCCTAAACTTCAATAAGAGCATATCTTATCAATaGCAGGGGCCTCAAGGTTCA | + |
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Preference number: 4 (lower is better) Translates to: LWSLVPHHSNLLSLNFNKSISYQ*QGPQGS Trigger: TGAACCTTGAGGCCCCTGGCATTGATAAGATATGCT...CTTATTGAAGTTTAGGGAAAGAAGGTTGCTGTGGTGAGGAACGAGACTCCATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR CCA 90 bp | CTTATCACTCATTTGGCACATAGCATATTGTACCACAAATGCTCTCTTCCAAGGGGACAAGAAAAGAGCTaGTCATGGAGCTGGATGACC | + |
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Preference number: 4 (lower is better) Translates to: LITHLAHSILYHKCSLPRGQEKS*SWSWMT Trigger: GGTCATCCAGCTCCATGACCAGCTCTTTTCTTGTCC...CCTTGGAAGAGAGCATTTGTGGTACAATATGCTATGTGCCAAATGAGTGATAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR CCA 90 bp | TCCAAGGGAAATATAAGCTCACCAACGTCAAGTTATAGAAGAAACACTATGGGAGGCATACCTCTGCTATaGAGTCTCGTTCCTCACCAC | + |
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Preference number: 4 (lower is better) Translates to: SKGNISSPTSSYRRNTMGGIPLL*SLVPHH Trigger: GTGGTGAGGAACGAGACTCCATAGCAGAGGTATGCC...TCCCATAGTGTTTCTTCTATAACTTGACGTTGGTGAGCTTATATTTCCCTTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| 3UTR CAA 72 bp | ATTCTCATCTTTAGCAACTTGTTCATTTTAGTATGCTaGCCTGGATATCTGCGCTCCATCCCAATGCCACCC | + |
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Preference number: 4 (lower is better) Translates to: ILIFSNLFILVC*PGYLRSIPMPP Trigger: GGGTGGCATTGGGATGGAGCGCAGATATCCAGGCAAGCATACTAAAATGAACAAGTTGCTAAAGATGAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR GCA 90 bp | GTTCATTTTAGTATGCTTGCCTGGATATCTGCGCTCCATCCCAATGCCACCCCTATATTGTACCACAAATaGTCTCTTCCAAGGGAAATA | + |
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Preference number: 4 (lower is better) Translates to: VHFSMLAWISALHPNATPILYHK*SLPREI Trigger: TATTTCCCTTGGAAGAGAGCATTTGTGGTACAATAT...AGGGGTGGCATTGGGATGGAGCGCAGATATCCAGGCAAGCATACTAAAATGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR CCA 90 bp | GCTTCACCATTATTATCCCCCAAACCCATTATAGAAATACAACAGAAATATTGGCTTGCACAGCGGTGTTaGCAGGAGCCACCTTTGCTA | + |
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Preference number: 4 (lower is better) Translates to: ASPLLSPKPIIEIQQKYWLAQRC*QEPPLL Trigger: TAGCAAAGGTGGCTCCTGCCAACACCGCTGTGCAAG...CCAATATTTCTGTTGTATTTCTATAATGGGTTTGGGGGATAATAATGGTGAAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR CCA 90 bp | TCCAAGGGAAATATAAGCTCACCAACGTCAAGTTATAGAAGAAACACTATGGGAGTGATCCACATGTCCTaGAAGGCAGACAAGGATGCA | + |
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Preference number: 4 (lower is better) Translates to: SKGNISSPTSSYRRNTMGVIHMS*KADKDA Trigger: TGCATCCTTGTCTGCCTTCCAGGACATGTGGATCAC...TCCCATAGTGTTTCTTCTATAACTTGACGTTGGTGAGCTTATATTTCCCTTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR CCA 90 bp | GTTCATTTTAGTATGCTTGCCTGGATATCTGCGCTCCATCCCAATGCCACCCCTATCTTATCACTCATTTaGCACATAGCATATTGTACC | + |
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Preference number: 4 (lower is better) Translates to: VHFSMLAWISALHPNATPILSLI*HIAYCT Trigger: GGTACAATATGCTATGTGCCAAATGAGTGATAAGAT...AGGGGTGGCATTGGGATGGAGCGCAGATATCCAGGCAAGCATACTAAAATGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR CCA 90 bp | GTTCTACTCAATAGACATCTGTTCTTGAGCTTCACCATTATTATCCCCCAAACCGACAATCGGGTTTCTTaGCCATTTCCTCTTCGTAGT | + |
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Preference number: 4 (lower is better) Translates to: VLLNRHLFLSFTIIIPQTDNRVS*PFPLRS Trigger: ACTACGAAGAGGAAATGGCCAAGAAACCCGATTGTC...GGTTTGGGGGATAATAATGGTGAAGCTCAAGAACAGATGTCTATTGAGTAGAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR CCA 90 bp | GCTTCACCATTATTATCCCCCAAACCCATTATAGAAATACAACAGAAATATTGGAGAGAAGAGGGCCTCTaGACAAGAAAAGAGCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: ASPLLSPKPIIEIQQKYWREEGL*TRKELV Trigger: GACCAGCTCTTTTCTTGTCCAGAGGCCCTCTTCTCT...CCAATATTTCTGTTGTATTTCTATAATGGGTTTGGGGGATAATAATGGTGAAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| 3UTR CAA 72 bp | CCTGAATATGCTTTGTTCATTCTCATCTTTAGCAACTaGTTCATTTTAGTATGCTTGCCTGGATATCTGCGC | + |
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Preference number: 4 (lower is better) Translates to: PEYALFILIFSN*FILVCLPGYLR Trigger: GCGCAGATATCCAGGCAAGCATACTAAAATGAACAAGTTGCTAAAGATGAGAATGAACAAAGCATATTCAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR TCA 90 bp | TCCAAGGGAAATATAAGCTCACCAACGTCAAGTTATAGAAGAAACACTATGGGAAACAAAAGCTCTCCTTaGTGTCTTCAACAATCTTTC | + |
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Preference number: 4 (lower is better) Translates to: SKGNISSPTSSYRRNTMGNKSSP*CLQQSF Trigger: GAAAGATTGTTGAAGACATCAAGGAGAGCTTTTGTT...TCCCATAGTGTTTCTTCTATAACTTGACGTTGGTGAGCTTATATTTCCCTTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR CAA 90 bp | CCCAATGCCACCCCTTCCATGATGGCATACCTCTGCTATGGAGTCTCGTTCCTCCCAGCCACGCCCGCCTaGATCATTCCCGAGCCGTTG | + |
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Preference number: 5 (lower is better) Translates to: PNATPSMMAYLCYGVSFLPATPA*IIPEPL Trigger: CAACGGCTCGGGAATGATCAAGGCGGGCGTGGCTGG...GAGGAACGAGACTCCATAGCAGAGGTATGCCATCATGGAAGGGGTGGCATTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR CAA 90 bp | ACCCCTTCCATGATGGCATACCTCTGCTATGGAGTCTCGTTCCTCACCACAGCAGCGCGGCTCTGGCCCTaGGCGCGGCCGATAATGTTC | + |
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Preference number: 5 (lower is better) Translates to: TPSMMAYLCYGVSFLTTAARLWP*ARPIMF Trigger: GAACATTATCGGCCGCGCCAAGGGCCAGAGCCGCGC...TGCTGTGGTGAGGAACGAGACTCCATAGCAGAGGTATGCCATCATGGAAGGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR CAA 90 bp | ACCCCTTCCATGATGGCATACCTCTGCTATGGAGTCTCGTTCCTCACCACAGCACCTCCAGTCCTGAGCTaGGTCGCCCACGCAGAGTTC | + |
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Preference number: 5 (lower is better) Translates to: TPSMMAYLCYGVSFLTTAPPVLS*VAHAEF Trigger: GAACTCTGCGTGGGCGACCAAGCTCAGGACTGGAGG...TGCTGTGGTGAGGAACGAGACTCCATAGCAGAGGTATGCCATCATGGAAGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS CCA 90 bp | GCCAGGGGCCTCAAGGTTCATATGACACGGAGAGAAGAGGGCCTCTaGACAAGAAAAGAGCTGGTCATGGAGCTGGATGACCTTCCCATC | + |
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Preference number: 5 (lower is better) Translates to: ARGLKVHMTRREEGL*TRKELVMELDDLPI Trigger: GATGGGAAGGTCATCCAGCTCCATGACCAGCTCTTTTCTTGTCCAGAGGCCCTCTTCTCTCCGTGTCATATGAACCTTGAGGCCCCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR CAA 90 bp | ATATCTGCGCTCCATCCCAATGCCACCCCTTCCATGATGGCATACCTCTGCTATATCATTCCCGAGCCGTaGTCGATCACCACCGGTAGC | + |
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Preference number: 5 (lower is better) Translates to: ISALHPNATPSMMAYLCYIIPEP*SITTGS Trigger: GCTACCGGTGGTGATCGACAACGGCTCGGGAATGAT...ATAGCAGAGGTATGCCATCATGGAAGGGGTGGCATTGGGATGGAGCGCAGATAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR CAA 90 bp | CCTCTGCTATGGAGTCTCGTTCCTCACCACAGCAACCTTCTTTCCCTAAACTTCGCCTGCCAGATCCAGTaGCTGCACACCATGAGGCAG | + |
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Preference number: 5 (lower is better) Translates to: PLLWSLVPHHSNLLSLNFACQIQ*LHTMRQ Trigger: CTGCCTCATGGTGTGCAGCAACTGGATCTGGCAGGC...GAAGTTTAGGGAAAGAAGGTTGCTGTGGTGAGGAACGAGACTCCATAGCAGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR CAA 90 bp | ATATCTGCGCTCCATCCCAATGCCACCCCTTCCATGATGGCATACCTCTGCTATCATTTCCGTGATCTGTaGCCGGTTGGCCAGTGGGTT | + |
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Preference number: 5 (lower is better) Translates to: ISALHPNATPSMMAYLCYHFRDL*PVGQWV Trigger: AACCCACTGGCCAACCGGCAACAGATCACGGAAATG...ATAGCAGAGGTATGCCATCATGGAAGGGGTGGCATTGGGATGGAGCGCAGATAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS TCA 90 bp | CTGCTGAAGCATATCTTATCAATGCCAGGGGCCTCAAGGTTCATATaGCACGGAGAGAAGAGGGCCTCTGGACAAGAAAAGAGCTGGTCA | + |
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Preference number: 5 (lower is better) Translates to: LLKHILSMPGASRFI*HGEKRASGQEKSWS Trigger: TGACCAGCTCTTTTCTTGTCCAGAGGCCCTCTTCTCTCCGTGTCATATGAACCTTGAGGCCCCTGGCATTGATAAGATATGCTTCAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS TCA 90 bp | AGAAGAGGGCCTCTGGACAAGAAAAGAGCTGGTCATGGAGCTGGATaGCCTTCCCATCAGGTAGTTGGTAAACTTTCTCTAGACAATCGG | + |
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Preference number: 5 (lower is better) Translates to: RRGPLDKKRAGHGAG*PSHQVVGKLSLDNR Trigger: CCGATTGTCTAGAGAAAGTTTACCAACTACCTGATGGGAAGGTCATCCAGCTCCATGACCAGCTCTTTTCTTGTCCAGAGGCCCTCTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR CAA 90 bp | ACCCCTTCCATGATGGCATACCTCTGCTATGGAGTCTCGTTCCTCACCACAGCACCTCTTCGTAGTTCATaGCCACATAACAAAAGCTCT | + |
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Preference number: 5 (lower is better) Translates to: TPSMMAYLCYGVSFLTTAPLRSS*PHNKSS Trigger: AGAGCTTTTGTTATGTGGCAATGAACTACGAAGAGG...TGCTGTGGTGAGGAACGAGACTCCATAGCAGAGGTATGCCATCATGGAAGGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS GCA 90 bp | CCTCCCATCCACACTGATATTTTCCTTTCTGGAGGAGCTATAACTTaGACAGCGGTGTTGGCAGGAGCCACCTTTGCTATATCCTTAACT | + |
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Preference number: 5 (lower is better) Translates to: PPIHTDIFLSGGAIT*TAVLAGATFAISLT Trigger: AGTTAAGGATATAGCAAAGGTGGCTCCTGCCAACACCGCTGTGCAAGTTATAGCTCCTCCAGAAAGGAAAATATCAGTGTGGATGGGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR CAA 90 bp | TCCAAGGGAAATATAAGCTCACCAACGTCAAGTTATAGAAGAAACACTATGGGAGTGATCTGTTGCCGGTaGGCCAGTGGGTTCAGCGCT | + |
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Preference number: 5 (lower is better) Translates to: SKGNISSPTSSYRRNTMGVICCR*ASGFSA Trigger: AGCGCTGAACCCACTGGCCAACCGGCAACAGATCAC...TCCCATAGTGTTTCTTCTATAACTTGACGTTGGTGAGCTTATATTTCCCTTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR CAA 90 bp | CCTCTGCTATGGAGTCTCGTTCCTCACCACAGCAACCTTCTTTCCCTAAACTTCTTCATTTTAGTATGCTaGCCTGGATATCTGCGCTCC | + |
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Preference number: 5 (lower is better) Translates to: PLLWSLVPHHSNLLSLNFFILVC*PGYLRS Trigger: GGAGCGCAGATATCCAGGCAAGCATACTAAAATGAA...GAAGTTTAGGGAAAGAAGGTTGCTGTGGTGAGGAACGAGACTCCATAGCAGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS TCA 90 bp | CTGGAAGGCAGACAAGGATGCAAGAATAGAACCTCCCATCCACACTaGTATTTTCCTTTCTGGAGGAGCTATAACTTGCACAGCGGTGTT | + |
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Preference number: 5 (lower is better) Translates to: LEGRQGCKNRTSHPH*YFPFWRSYNLHSGV Trigger: AACACCGCTGTGCAAGTTATAGCTCCTCCAGAAAGGAAAATATCAGTGTGGATGGGAGGTTCTATTCTTGCATCCTTGTCTGCCTTCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR CAA 90 bp | CCTCTGCTATGGAGTCTCGTTCCTCACCACAGCAACCTTCTTTCCCTAAACTTCCCGGCAAGGATAATATaGGAAAAGAAGGAATTCCTC | + |
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Preference number: 5 (lower is better) Translates to: PLLWSLVPHHSNLLSLNFPARII*EKKEFL Trigger: GAGGAATTCCTTCTTTTCCAATATTATCCTTGCCGG...GAAGTTTAGGGAAAGAAGGTTGCTGTGGTGAGGAACGAGACTCCATAGCAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR CAA 90 bp | AATGCCACCCCTTCCATGATGGCATACCTCTGCTATGGAGTCTCGTTCCTCACCCTTTGGTGTACTATGTaGGGTCCAACTTCTTTAAAT | + |
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Preference number: 5 (lower is better) Translates to: NATPSMMAYLCYGVSFLTLWCTM*GPTSLN Trigger: ATTTAAAGAAGTTGGACCCAACATAGTACACCAAAG...GGTGAGGAACGAGACTCCATAGCAGAGGTATGCCATCATGGAAGGGGTGGCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR CAA 90 bp | GATGGCATACCTCTGCTATGGAGTCTCGTTCCTCACCACAGCAACCTTCTTTCCTGCCCTGAATATGCTTaGTTCATTCTCATCTTTAGC | + |
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Preference number: 5 (lower is better) Translates to: DGIPLLWSLVPHHSNLLSCPEYA*FILIFS Trigger: GCTAAAGATGAGAATGAACAAAGCATATTCAGGGCA...GGAAAGAAGGTTGCTGTGGTGAGGAACGAGACTCCATAGCAGAGGTATGCCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS TCA 90 bp | GTTATAGTCATAGATATGCTTCCACATGATCTCCATGTCCTCCCATaGAGTAATGAGACCACGCTCCACTGGGTAACTGATGAACAGCGA | + |
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Preference number: 5 (lower is better) Translates to: VIVIDMLPHDLHVLP*SNETTLHWVTDEQR Trigger: TCGCTGTTCATCAGTTACCCAGTGGAGCGTGGTCTCATTACTTCATGGGAGGACATGGAGATCATGTGGAAGCATATCTATGACTATAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS GCA 90 bp | GAAGCATCTTTGGTGTACTATGTTGGGTCCAACTTCTTTAAATTCTaGAGCAGTGATCCACATGTCCTGGAAGGCAGACAAGGATGCAAG | + |
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Preference number: 5 (lower is better) Translates to: EASLVYYVGSNFFKF*SSDPHVLEGRQGCK Trigger: CTTGCATCCTTGTCTGCCTTCCAGGACATGTGGATCACTGCTGCAGAATTTAAAGAAGTTGGACCCAACATAGTACACCAAAGATGCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR CAA 90 bp | GCTTCACCATTATTATCCCCCAAACCCATTATAGAAATACAACAGAAATATTGGTGGAGGAGCTATAACTaGCACAGCGGTGTTGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: ASPLLSPKPIIEIQQKYWWRSYN*HSGVGR Trigger: CCTGCCAACACCGCTGTGCAAGTTATAGCTCCTCCA...CCAATATTTCTGTTGTATTTCTATAATGGGTTTGGGGGATAATAATGGTGAAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS TCA 90 bp | AAAAGAAGGAATTCCTCAGGCCTGTATCACATTTCATTATGCTGCTaGAGCATATCTTATCAATGCCAGGGGCCTCAAGGTTCATATGAC | + |
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Preference number: 5 (lower is better) Translates to: KRRNSSGLYHISLCC*SISYQCQGPQGSYD Trigger: GTCATATGAACCTTGAGGCCCCTGGCATTGATAAGATATGCTTCAGCAGCATAATGAAATGTGATACAGGCCTGAGGAATTCCTTCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR CAA 90 bp | TCCAAGGGAAATATAAGCTCACCAACGTCAAGTTATAGAAGAAACACTATGGGATCCTTAACTAACCGCTaGTCTAAACCAGGGAAAGAG | + |
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Preference number: 5 (lower is better) Translates to: SKGNISSPTSSYRRNTMGSLTNR*SKPGKE Trigger: CTCTTTCCCTGGTTTAGACAAGCGGTTAGTTAAGGA...TCCCATAGTGTTTCTTCTATAACTTGACGTTGGTGAGCTTATATTTCCCTTGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR CAA 90 bp | CTTATCACTCATTTGGCACATAGCATATTGTACCACAAATGCTCTCTTCCAAGGTTGGCACATAGCATATaGTACCACAAATGCTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LITHLAHSILYHKCSLPRLAHSI*YHKCSL Trigger: AAGAGAGCATTTGTGGTACAATATGCTATGTGCCAA...CCTTGGAAGAGAGCATTTGTGGTACAATATGCTATGTGCCAAATGAGTGATAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS-3UTR CAA 90 bp | GCTTCACCATTATTATCCCCCAAACCCATTATAGAAATACAACAGAAATATTGGATTTCAGAAGCATCTTaGGTGTACTATGTTGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: ASPLLSPKPIIEIQQKYWISEAS*VYYVGS Trigger: GGACCCAACATAGTACACCAAAGATGCTTCTGAAAT...CCAATATTTCTGTTGTATTTCTATAATGGGTTTGGGGGATAATAATGGTGAAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS CCA 90 bp | AAACATTTTCTTCCAACCATTTTATCTGTATTTCAGAAGCATCTTTaGTGTACTATGTTGGGTCCAACTTCTTTAAATTCTGCAGCAGTG | + |
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Preference number: 5 (lower is better) Translates to: KHFLPTILSVFQKHL*CTMLGPTSLNSAAV Trigger: CACTGCTGCAGAATTTAAAGAAGTTGGACCCAACATAGTACACCAAAGATGCTTCTGAAATACAGATAAAATGGTTGGAAGAAAATGTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS CAA 90 bp | GGCTCCCGGCACCCAGCCACGCCCGCCTTGATCATTCCCGAGCCGTaGTCGATCACCACCGGTAGCTGGCAGTGGTTCATGCCGCCGCTG | + |
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Preference number: 6 (lower is better) Translates to: GSRHPATPALIIPEP*SITTGSWQWFMPPL Trigger: CAGCGGCGGCATGAACCACTGCCAGCTACCGGTGGTGATCGACAACGGCTCGGGAATGATCAAGGCGGGCGTGGCTGGGTGCCGGGAGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS GCA 72 bp | CGTTGTCGATCACCACCGGTAGCTGGCAGTGGTTCATaGCGCCGCTGCTGCCGCCGCCTCCTGTCTCTGAGC | + |
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Preference number: 6 (lower is better) Translates to: RCRSPPVAGSGS*RRCCRRLLSLS Trigger: GCTCAGAGACAGGAGGCGGCGGCAGCAGCGGCGGCATGAACCACTGCCAGCTACCGGTGGTGATCGACAACG 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS CAA 72 bp | CACCCAGCCACGCCCGCCTTGATCATTCCCGAGCCGTaGTCGATCACCACCGGTAGCTGGCAGTGGTTCATG | + |
|
Preference number: 6 (lower is better) Translates to: HPATPALIIPEP*SITTGSWQWFM Trigger: CATGAACCACTGCCAGCTACCGGTGGTGATCGACAACGGCTCGGGAATGATCAAGGCGGGCGTGGCTGGGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS CCA 72 bp | CGTGATCTGTTGCCGGTTGGCCAGTGGGTTCAGCGCTaGCTCAGTAATCAAGACTGGGCCATCACACGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: RDLLPVGQWVQR*LSNQDWAITRL Trigger: AAGCCGTGTGATGGCCCAGTCTTGATTACTGAGCCAGCGCTGAACCCACTGGCCAACCGGCAACAGATCACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS CCA 72 bp | CTCAAGGTTCATATGACACGGAGAGAAGAGGGCCTCTaGACAAGAAAAGAGCTGGTCATGGAGCTGGATGAC | + |
|
Preference number: 6 (lower is better) Translates to: LKVHMTRREEGL*TRKELVMELDD Trigger: GTCATCCAGCTCCATGACCAGCTCTTTTCTTGTCCAGAGGCCCTCTTCTCTCCGTGTCATATGAACCTTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS CAA 72 bp | GCAGGAGCCACCTTTGCTATATCCTTAACTAACCGCTaGTCTAAACCAGGGAAAGAGGTTGATCCCCCGGCA | + |
|
Preference number: 6 (lower is better) Translates to: AGATFAISLTNR*SKPGKEVDPPA Trigger: TGCCGGGGGATCAACCTCTTTCCCTGGTTTAGACAAGCGGTTAGTTAAGGATATAGCAAAGGTGGCTCCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS CAA 90 bp | GCGGTGTTGGCAGGAGCCACCTTTGCTATATCCTTAACTAACCGCTaGTCTAAACCAGGGAAAGAGGTTGATCCCCCGGCAAGGATAATA | + |
|
Preference number: 6 (lower is better) Translates to: AVLAGATFAISLTNR*SKPGKEVDPPARII Trigger: TATTATCCTTGCCGGGGGATCAACCTCTTTCCCTGGTTTAGACAAGCGGTTAGTTAAGGATATAGCAAAGGTGGCTCCTGCCAACACCGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS TCA 72 bp | CATATCTTATCAATGCCAGGGGCCTCAAGGTTCATATaGCACGGAGAGAAGAGGGCCTCTGGACAAGAAAAG | + |
|
Preference number: 6 (lower is better) Translates to: HILSMPGASRFI*HGEKRASGQEK Trigger: CTTTTCTTGTCCAGAGGCCCTCTTCTCTCCGTGTCATATGAACCTTGAGGCCCCTGGCATTGATAAGATATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS TCA 72 bp | CCTCTGGACAAGAAAAGAGCTGGTCATGGAGCTGGATaGCCTTCCCATCAGGTAGTTGGTAAACTTTCTCTA | + |
|
Preference number: 6 (lower is better) Translates to: PLDKKRAGHGAG*PSHQVVGKLSL Trigger: TAGAGAAAGTTTACCAACTACCTGATGGGAAGGTCATCCAGCTCCATGACCAGCTCTTTTCTTGTCCAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS CAA 72 bp | CCAGGGAAAGAGGTTGATCCCCCGGCAAGGATAATATaGGAAAAGAAGGAATTCCTCAGGCCTGTATCACAT | + |
|
Preference number: 6 (lower is better) Translates to: PGKEVDPPARII*EKKEFLRPVSH Trigger: ATGTGATACAGGCCTGAGGAATTCCTTCTTTTCCAATATTATCCTTGCCGGGGGATCAACCTCTTTCCCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS CCA 72 bp | ACTTCTTTAAATTCTGCAGCAGTGATCCACATGTCCTaGAAGGCAGACAAGGATGCAAGAATAGAACCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: TSLNSAAVIHMS*KADKDARIEPP Trigger: GGGAGGTTCTATTCTTGCATCCTTGTCTGCCTTCCAGGACATGTGGATCACTGCTGCAGAATTTAAAGAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS GCA 72 bp | TTGGTGTACTATGTTGGGTCCAACTTCTTTAAATTCTaGAGCAGTGATCCACATGTCCTGGAAGGCAGACAA | + |
|
Preference number: 6 (lower is better) Translates to: LVYYVGSNFFKF*SSDPHVLEGRQ Trigger: TTGTCTGCCTTCCAGGACATGTGGATCACTGCTGCAGAATTTAAAGAAGTTGGACCCAACATAGTACACCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS GCA 72 bp | ATCGGGTTTCTTGGCCATTTCCTCTTCGTAGTTCATTaGCACATAACAAAAGCTCTCCTTGATGTCTTCAAC | + |
|
Preference number: 6 (lower is better) Translates to: IGFLGHFLFVVH*HITKALLDVFN Trigger: GTTGAAGACATCAAGGAGAGCTTTTGTTATGTGGCAATGAACTACGAAGAGGAAATGGCCAAGAAACCCGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS CAA 90 bp | TTGTCTAAACCAGGGAAAGAGGTTGATCCCCCGGCAAGGATAATATaGGAAAAGAAGGAATTCCTCAGGCCTGTATCACATTTCATTATG | + |
|
Preference number: 6 (lower is better) Translates to: LSKPGKEVDPPARII*EKKEFLRPVSHFIM Trigger: CATAATGAAATGTGATACAGGCCTGAGGAATTCCTTCTTTTCCAATATTATCCTTGCCGGGGGATCAACCTCTTTCCCTGGTTTAGACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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| CDS CCA 72 bp | GTAGTTGGTAAACTTTCTCTAGACAATCGGGTTTCTTaGCCATTTCCTCTTCGTAGTTCATTGCCACATAAC | + |
|
Preference number: 6 (lower is better) Translates to: VVGKLSLDNRVS*PFPLRSSLPHN Trigger: GTTATGTGGCAATGAACTACGAAGAGGAAATGGCCAAGAAACCCGATTGTCTAGAGAAAGTTTACCAACTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330368.3 |
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