RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ACTN4 (Homo sapiens)

Ensembl gene IDs: ENSG00000130402

Ensembl transcript IDs: ENST00000252699.7, ENST00000390009.7, ENST00000424234.7, ENST00000440400.2, ENST00000477174.1, ENST00000489451.1, ENST00000495553.1, ENST00000588618.5, ENST00000589528.1, ENST00000634514.1, ENST00000634682.1, ENST00000634692.1, ENST00000634960.2, ENST00000635153.1, ENST00000635260.1, ENST00000635294.1, ENST00000635695.1, ENST00000635701.1, ENST00000635719.1

Found 398 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACCATCAACCACCAGGCAGCCAGGCCATCAGCCCACCTCCACCTCTaGAGGGTCCCCAGAGACCCACGCCCGACGCAGACCCGGAGGAGC +
Preference number: 1 (lower is better)
Translates to: TINHQAARPSAHLHL*RVPRDPRPTQTRRS
Trigger: GCTCCTCCGGGTCTGCGTCGGGCGTGGGTCTCTGGGGACCCTCCAGAGGTGGAGGTGGGCTGATGGCCTGGCTGCCTGGTGGTTGATGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR GCA 90 bp CTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCCTCACTaGTCACGGCCGGGTGACCACTCTGGCCTGCGTACTCCTCACTCA +
Preference number: 1 (lower is better)
Translates to: LSLASTCLGLVSGPH*SRPGDHSGLRTPHS
Trigger: TGAGTGAGGAGTACGCAGGCCAGAGTGGTCACCCGGCCGTGAGCAGTGAGGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR CCA 90 bp GGGATAGCCGTCTGCGTGTGGACTTCGAGCGGTTCGTGTCCTGTGTaGCCCACCTCACCTGCATCTTCTGTGAGTACCACCCCGGCATGG +
Preference number: 1 (lower is better)
Translates to: GIAVCVWTSSGSCPV*PTSPASSVSTTPAW
Trigger: CCATGCCGGGGTGGTACTCACAGAAGATGCAGGTGAGGTGGGCCACACAGGACACGAACCGCTCGAAGTCCACACGCAGACGGCTATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR TCA 90 bp CACCTGTCTGGGGCTAGTCTCTGGCCCTCACTGCTCACGGCCGGGTaGCCACTCTGGCCTGCGTACTCCTCACTCAGAAACAAGAACAGC +
Preference number: 1 (lower is better)
Translates to: HLSGASLWPSLLTAG*PLWPAYSSLRNKNS
Trigger: GCTGTTCTTGTTTCTGAGTGAGGAGTACGCAGGCCAGAGTGGTCACCCGGCCGTGAGCAGTGAGGGCCAGAGACTAGCCCCAGACAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR CCA 90 bp TTCCTTAGTGGATGGAGGTGGCCACCTTCTCCTAGGATCTCCGGATaGGCGCACCTGCTGCTCAGGGCAGGGTTGCTGAGCAAGACCACC +
Preference number: 1 (lower is better)
Translates to: FLSGWRWPPSPRISG*AHLLLRAGLLSKTT
Trigger: GGTGGTCTTGCTCAGCAACCCTGCCCTGAGCAGCAGGTGCGCCCATCCGGAGATCCTAGGAGAAGGTGGCCACCTCCATCCACTAAGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR GCA 90 bp AGGTGGGAGGGACAGGGTGGCTCAGGCTCTGTCCTGCGAGCTCCCTaGCTCAAGCCACTGTCTTCCTTCTCTTCCTTAGTGGATGGAGGT +
Preference number: 1 (lower is better)
Translates to: RWEGQGGSGSVLRAP*LKPLSSFSSLVDGG
Trigger: ACCTCCATCCACTAAGGAAGAGAAGGAAGACAGTGGCTTGAGGCAGGGAGCTCGCAGGACAGAGCCTGAGCCACCCTGTCCCTCCCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR CCA 90 bp TTGAAGGGATCAGCCTGTACTCACCCTGCCGGGATGGGGCAGAGTTaGGGTGTGACACCCTGTGGCATTCATGTCCTCCCTGAGGAGGTG +
Preference number: 1 (lower is better)
Translates to: LKGSACTHPAGMGQS*GVTPCGIHVLPEEV
Trigger: CACCTCCTCAGGGAGGACATGAATGCCACAGGGTGTCACACCCCAACTCTGCCCCATCCCGGCAGGGTGAGTACAGGCTGATCCCTTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR CCA 90 bp CTGCCTCAAGCCACTGTCTTCCTTCTCTTCCTTAGTGGATGGAGGTaGCCACCTTCTCCTAGGATCTCCGGATGGGCGCACCTGCTGCTC +
Preference number: 1 (lower is better)
Translates to: LPQATVFLLFLSGWR*PPSPRISGWAHLLL
Trigger: GAGCAGCAGGTGCGCCCATCCGGAGATCCTAGGAGAAGGTGGCCACCTCCATCCACTAAGGAAGAGAAGGAAGACAGTGGCTTGAGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR CCA 90 bp AGCTCCCTGCCTCAAGCCACTGTCTTCCTTCTCTTCCTTAGTGGATaGAGGTGGCCACCTTCTCCTAGGATCTCCGGATGGGCGCACCTG +
Preference number: 1 (lower is better)
Translates to: SSLPQATVFLLFLSG*RWPPSPRISGWAHL
Trigger: CAGGTGCGCCCATCCGGAGATCCTAGGAGAAGGTGGCCACCTCCATCCACTAAGGAAGAGAAGGAAGACAGTGGCTTGAGGCAGGGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR TCA 90 bp GCTGTCTTAGTCCGTTTGATGGATGAGGAAACAGGCCCAGAGGATTaGAGGGATCAGCCTGTACTCACCCTGCCGGGATGGGGCAGAGTT +
Preference number: 1 (lower is better)
Translates to: AVLVRLMDEETGPED*RDQPVLTLPGWGRV
Trigger: AACTCTGCCCCATCCCGGCAGGGTGAGTACAGGCTGATCCCTTCAATCCTCTGGGCCTGTTTCCTCATCCATCAAACGGACTAAGACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR TCA 90 bp TCACACACCCTATGGGGTCGGGGCTGTCTTAGTCCGTTTGATGGATaGGGAAACAGGCCCAGAGGATTGAAGGGATCAGCCTGTACTCAC +
Preference number: 1 (lower is better)
Translates to: SHTLWGRGCLSPFDG*GNRPRGLKGSACTH
Trigger: GTGAGTACAGGCTGATCCCTTCAATCCTCTGGGCCTGTTTCCTCATCCATCAAACGGACTAAGACAGCCCCGACCCCATAGGGTGTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR CCA 90 bp AGACCCACGCCCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGCAAGGCCGGGGCTGGTaGGATGGGGTGCGGTTCAGG +
Preference number: 2 (lower is better)
Translates to: RPTPDADPEEHQQGARAEQGRGW*DGVRFR
Trigger: CCTGAACCGCACCCCATCCCACCAGCCCCGGCCTTG...CTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGGCGTGGGTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR CCA 90 bp GGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCCCAAGGCCGGGGCTGGTaGGATGGGGTGCGGTTCAGG +
Preference number: 2 (lower is better)
Translates to: GMGATLSGIHLSGASLWPQGRGW*DGVRFR
Trigger: CCTGAACCGCACCCCATCCCACCAGCCCCGGCCTTG...GGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR TCA 90 bp CCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCTGCTCACGGCCGGGTaGCCACTCTGGCCTGCGTAC +
Preference number: 2 (lower is better)
Translates to: PGMGATLSGIHLSGASLWLLTAG*PLWPAY
Trigger: GTACGCAGGCCAGAGTGGTCACCCGGCCGTGAGCAG...CCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR GCA 90 bp GCCGCTACCGGGATAGCCGTCTGCGTGTGGACTTCGAGCGGTTCGTGTCCTGTGGTCTCTGGCCCTCACTaGTCACGGCCGGGTGACCAC +
Preference number: 2 (lower is better)
Translates to: AATGIAVCVWTSSGSCPVVSGPH*SRPGDH
Trigger: GTGGTCACCCGGCCGTGAGCAGTGAGGGCCAGAGAC...CACAGGACACGAACCGCTCGAAGTCCACACGCAGACGGCTATCCCGGTAGCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR GCA 90 bp GCCGCTACCGGGATAGCCGTCTGCGTGTGGACTTCGAGCGGTTCGTGTCCTGTGCACCCTGCCCCTCTCTaGACAGGCCACTGCAGCCAG +
Preference number: 2 (lower is better)
Translates to: AATGIAVCVWTSSGSCPVHPAPL*TGHCSQ
Trigger: CTGGCTGCAGTGGCCTGTGCAGAGAGGGGCAGGGTG...CACAGGACACGAACCGCTCGAAGTCCACACGCAGACGGCTATCCCGGTAGCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR CCA 90 bp GCCGCTACCGGGATAGCCGTCTGCGTGTGGACTTCGAGCGGTTCGTGTCCTGTGAAGGGGTACGGGGACTaGTGGGCACTCACCCTGCCC +
Preference number: 2 (lower is better)
Translates to: AATGIAVCVWTSSGSCPVKGYGD*WALTLP
Trigger: GGGCAGGGTGAGTGCCCACCAGTCCCCGTACCCCTT...CACAGGACACGAACCGCTCGAAGTCCACACGCAGACGGCTATCCCGGTAGCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR CAA 90 bp TCTCCTAGGATCTCCGGATGGGCGCACCTGCTGCTCAGGGCAGGGTaGCTGAGCAAGACCACCTCCCTAGGCCTTGCCTGGCATGGGTGC +
Preference number: 2 (lower is better)
Translates to: SPRISGWAHLLLRAG*LSKTTSLGLAWHGC
Trigger: GCACCCATGCCAGGCAAGGCCTAGGGAGGTGGTCTTGCTCAGCAACCCTGCCCTGAGCAGCAGGTGCGCCCATCCGGAGATCCTAGGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR GCA 90 bp ATTGAAGGGATCAGCCTGTACTCACCCTGCCGGGATGGGGCAGAGTTGGGGTGTCCGGATGGGCGCACCTaGTGCTCAGGGCAGGGTTGC +
Preference number: 2 (lower is better)
Translates to: IEGISLYSPCRDGAELGCPDGRT*CSGQGC
Trigger: GCAACCCTGCCCTGAGCAGCAGGTGCGCCCATCCGG...ACACCCCAACTCTGCCCCATCCCGGCAGGGTGAGTACAGGCTGATCCCTTCAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR GCA 90 bp GCCGCTACCGGGATAGCCGTCTGCGTGTGGACTTCGAGCGGTTCGTGTCCTGTGGGTGAGGGGGTCATCTaGCTGACCCACAGACAGGTG +
Preference number: 2 (lower is better)
Translates to: AATGIAVCVWTSSGSCPVGEGVI*LTHRQV
Trigger: CACCTGTCTGTGGGTCAGGCAGATGACCCCCTCACC...CACAGGACACGAACCGCTCGAAGTCCACACGCAGACGGCTATCCCGGTAGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR CCA 90 bp GCCGCTACCGGGATAGCCGTCTGCGTGTGGACTTCGAGCGGTTCGTGTCCTGTGTCCCTAGGCCTTGCCTaGCATGGGTGCCACTCTCTC +
Preference number: 2 (lower is better)
Translates to: AATGIAVCVWTSSGSCPVSLGLA*HGCHSL
Trigger: GAGAGAGTGGCACCCATGCCAGGCAAGGCCTAGGGA...CACAGGACACGAACCGCTCGAAGTCCACACGCAGACGGCTATCCCGGTAGCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR CCA 90 bp ATTGAAGGGATCAGCCTGTACTCACCCTGCCGGGATGGGGCAGAGTTGGGGTGTGGGTACGGGGACTGGTaGGCACTCACCCTGCCCCTC +
Preference number: 2 (lower is better)
Translates to: IEGISLYSPCRDGAELGCGYGDW*ALTLPL
Trigger: GAGGGGCAGGGTGAGTGCCCACCAGTCCCCGTACCC...ACACCCCAACTCTGCCCCATCCCGGCAGGGTGAGTACAGGCTGATCCCTTCAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR CCA 90 bp GATGGAGGTGGCCACCTTCTCCTAGGATCTCCGGATGGGCGCACCTGCTGCTCAAGGCCTTGCCTGGCATaGGTGCCACTCTCTCTGGCA +
Preference number: 2 (lower is better)
Translates to: DGGGHLLLGSPDGRTCCSRPCLA*VPLSLA
Trigger: TGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCCT...TGAGCAGCAGGTGCGCCCATCCGGAGATCCTAGGAGAAGGTGGCCACCTCCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR GCA 90 bp GATGGAGGTGGCCACCTTCTCCTAGGATCTCCGGATGGGCGCACCTGCTGCTCACTTGCCTGGCATGGGTaGCACTCTCTCTGGCATCCA +
Preference number: 2 (lower is better)
Translates to: DGGGHLLLGSPDGRTCCSLAWHG*HSLWHP
Trigger: TGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAG...TGAGCAGCAGGTGCGCCCATCCGGAGATCCTAGGAGAAGGTGGCCACCTCCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR CCA 90 bp ATTGAAGGGATCAGCCTGTACTCACCCTGCCGGGATGGGGCAGAGTTGGGGTGTCCTAGGATCTCCGGATaGGCGCACCTGCTGCTCAGG +
Preference number: 2 (lower is better)
Translates to: IEGISLYSPCRDGAELGCPRISG*AHLLLR
Trigger: CCTGAGCAGCAGGTGCGCCCATCCGGAGATCCTAGG...ACACCCCAACTCTGCCCCATCCCGGCAGGGTGAGTACAGGCTGATCCCTTCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR TCA 90 bp CTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCCTCACTGCTCACGGCCGGGTCGAGCTAGTCCACGTTaGCAGCTTAAGACAGTGCTA +
Preference number: 2 (lower is better)
Translates to: LASTCLGLVSGPHCSRPGRASPR*QLKTVL
Trigger: TAGCACTGTCTTAAGCTGTCAACGTGGACTAGCTCG...ACCCGGCCGTGAGCAGTGAGGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR GCA 90 bp AGGATCTCCGGATGGGCGCACCTGCTGCTCAGGGCAGGGTTGCTGAGCAAGACCGTGACCACTCTGGCCTaGGTACTCCTCACTCAGAAA +
Preference number: 2 (lower is better)
Translates to: RISGWAHLLLRAGLLSKTVTTLA*VLLTQK
Trigger: TTTCTGAGTGAGGAGTACGCAGGCCAGAGTGGTCAC...GGTCTTGCTCAGCAACCCTGCCCTGAGCAGCAGGTGCGCCCATCCGGAGATCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR GCA 90 bp CCTCCAGTGCCCACTGGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTCCGGATGGGCGCACCTaGTGCTCAGGGCAGGGTTGC +
Preference number: 2 (lower is better)
Translates to: PPVPTGKEKAPQDLRSNSPDGRT*CSGQGC
Trigger: GCAACCCTGCCCTGAGCAGCAGGTGCGCCCATCCGG...ACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCCAGTGGGCACTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR GCA 90 bp ATTGAAGGGATCAGCCTGTACTCACCCTGCCGGGATGGGGCAGAGTTGGGGTGTGGGGTGGGGATGCAATaGCAAGGTGGGTTCCCTGTG +
Preference number: 2 (lower is better)
Translates to: IEGISLYSPCRDGAELGCGVGMQ*QGGFPV
Trigger: CACAGGGAACCCACCTTGGCATTGCATCCCCACCCC...ACACCCCAACTCTGCCCCATCCCGGCAGGGTGAGTACAGGCTGATCCCTTCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR CCA 90 bp GGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCCGGCTCTCCTAGAAGGTaGAGGACAGACACAGGAGAA +
Preference number: 2 (lower is better)
Translates to: GMGATLSGIHLSGASLWPGSPRR*RTDTGE
Trigger: TTCTCCTGTGTCTGTCCTCCACCTTCTAGGAGAGCC...GGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR GCA 90 bp CCTCCAGTGCCCACTGGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTGGTGGGCACTCACCCTaGCCCTCTCTGCACAGGCCA +
Preference number: 2 (lower is better)
Translates to: PPVPTGKEKAPQDLRSNSGGHSP*PSLHRP
Trigger: TGGCCTGTGCAGAGAGGGGCAGGGTGAGTGCCCACC...ACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCCAGTGGGCACTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR CCA 90 bp CCTCCAGTGCCCACTGGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTGCCCACCTCCACCTCTaGAGGGTCCCCAGAGACCCA +
Preference number: 2 (lower is better)
Translates to: PPVPTGKEKAPQDLRSNSAHLHL*RVPRDP
Trigger: TGGGTCTCTGGGGACCCTCCAGAGGTGGAGGTGGGC...ACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCCAGTGGGCACTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR CCA 90 bp GCCGCTACCGGGATAGCCGTCTGCGTGTGGACTTCGAGCGGTTCGTGTCCTGTGCCTGTCCCCAGAGGGTaGTTTATCCAGAAACCAAGA +
Preference number: 2 (lower is better)
Translates to: AATGIAVCVWTSSGSCPVPVPRG*FIQKPR
Trigger: TCTTGGTTTCTGGATAAACCACCCTCTGGGGACAGG...CACAGGACACGAACCGCTCGAAGTCCACACGCAGACGGCTATCCCGGTAGCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR CCA 90 bp GGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCCCCTGTCCCCAGAGGGTaGTTTATCCAGAAACCAAGA +
Preference number: 2 (lower is better)
Translates to: GMGATLSGIHLSGASLWPPVPRG*FIQKPR
Trigger: TCTTGGTTTCTGGATAAACCACCCTCTGGGGACAGG...GGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR CCA 90 bp CCTCCAGTGCCCACTGGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTAAGGGGTACGGGGACTaGTGGGCACTCACCCTGCCC +
Preference number: 2 (lower is better)
Translates to: PPVPTGKEKAPQDLRSNSKGYGD*WALTLP
Trigger: GGGCAGGGTGAGTGCCCACCAGTCCCCGTACCCCTT...ACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCCAGTGGGCACTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR GCA 90 bp CCTCCAGTGCCCACTGGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTCTCTGCACAGGCCACTaGAGCCAGCACCTGGATGGG +
Preference number: 2 (lower is better)
Translates to: PPVPTGKEKAPQDLRSNSLCTGH*SQHLDG
Trigger: CCCATCCAGGTGCTGGCTGCAGTGGCCTGTGCAGAG...ACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCCAGTGGGCACTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR CCA 90 bp GGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTACCCACACATCGAGTCAAGGCCGGGGCTGGTaGGATGGGGTGCGGTTCAGG +
Preference number: 2 (lower is better)
Translates to: GKEKAPQDLRSNSTHTSSQGRGW*DGVRFR
Trigger: CCTGAACCGCACCCCATCCCACCAGCCCCGGCCTTG...ACTCGATGTGTGGGTACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR CCA 90 bp CCTCCAGTGCCCACTGGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTTCTGGGGCTAGTCTCTaGCCCTCACTGCTCACGGCC +
Preference number: 2 (lower is better)
Translates to: PPVPTGKEKAPQDLRSNSSGASL*PSLLTA
Trigger: GGCCGTGAGCAGTGAGGGCCAGAGACTAGCCCCAGA...ACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCCAGTGGGCACTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR GCA 90 bp AAATATCCTCCAGTGCCCACTGGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTGTCTCTGGCCCTCACTaGTCACGGCCGGGTGACCAC +
Preference number: 2 (lower is better)
Translates to: KYPPVPTGKEKAPQDLRSVSGPH*SRPGDH
Trigger: GTGGTCACCCGGCCGTGAGCAGTGAGGGCCAGAGAC...ACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCCAGTGGGCACTGGAGGATATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR GCA 90 bp GAGAAAGCCCCACAGGATTTAAGGAGTAACAGTACCCACACATCGAGTCACGTGGGTGGGCACTCACCCTaGCCCTCTCTGCACAGGCCA +
Preference number: 2 (lower is better)
Translates to: EKAPQDLRSNSTHTSSHVGGHSP*PSLHRP
Trigger: TGGCCTGTGCAGAGAGGGGCAGGGTGAGTGCCCACC...CACGTGACTCGATGTGTGGGTACTGTTACTCCTTAAATCCTGTGGGGCTTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR CCA 90 bp CCTCCAGTGCCCACTGGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTTCCCTAGGCCTTGCCTaGCATGGGTGCCACTCTCTC +
Preference number: 2 (lower is better)
Translates to: PPVPTGKEKAPQDLRSNSSLGLA*HGCHSL
Trigger: GAGAGAGTGGCACCCATGCCAGGCAAGGCCTAGGGA...ACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCCAGTGGGCACTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR CCA 90 bp ATTGAAGGGATCAGCCTGTACTCACCCTGCCGGGATGGGGCAGAGTTGGGGTGTCTCTTCCTTAGTGGATaGAGGTGGCCACCTTCTCCT +
Preference number: 2 (lower is better)
Translates to: IEGISLYSPCRDGAELGCLFLSG*RWPPSP
Trigger: AGGAGAAGGTGGCCACCTCCATCCACTAAGGAAGAG...ACACCCCAACTCTGCCCCATCCCGGCAGGGTGAGTACAGGCTGATCCCTTCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR CCA 90 bp CCTCCAGTGCCCACTGGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTTCCTCCCTGAGGAGGTaGGGTGGGGATGCAATGCCA +
Preference number: 2 (lower is better)
Translates to: PPVPTGKEKAPQDLRSNSSSLRR*GGDAMP
Trigger: TGGCATTGCATCCCCACCCCACCTCCTCAGGGAGGA...ACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCCAGTGGGCACTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR TCA 90 bp ATTGAAGGGATCAGCCTGTACTCACCCTGCCGGGATGGGGCAGAGTTGGGGTGTCGAGCTAGTCCACGTTaGCAGCTTAAGACAGTGCTA +
Preference number: 2 (lower is better)
Translates to: IEGISLYSPCRDGAELGCRASPR*QLKTVL
Trigger: TAGCACTGTCTTAAGCTGTCAACGTGGACTAGCTCG...ACACCCCAACTCTGCCCCATCCCGGCAGGGTGAGTACAGGCTGATCCCTTCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR TCA 90 bp CCTCCAGTGCCCACTGGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTCACCTGCATCTTCTGTaGGTACCACCCCGGCATGGT +
Preference number: 2 (lower is better)
Translates to: PPVPTGKEKAPQDLRSNSHLHLL*VPPRHG
Trigger: ACCATGCCGGGGTGGTACTCACAGAAGATGCAGGTG...ACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCCAGTGGGCACTGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR GCA 90 bp AAATATCCTCCAGTGCCCACTGGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTGCTCAGGCTCTGTCCTaGGAGCTCCCTGCCTCAAGC +
Preference number: 2 (lower is better)
Translates to: KYPPVPTGKEKAPQDLRSAQALS*ELPASS
Trigger: GCTTGAGGCAGGGAGCTCGCAGGACAGAGCCTGAGC...ACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCCAGTGGGCACTGGAGGATATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR GCA 90 bp GAGAAAGCCCCACAGGATTTAAGGAGTAACAGTACCCACACATCGAGTCACGTGCTCTGCACAGGCCACTaGAGCCAGCACCTGGATGGG +
Preference number: 2 (lower is better)
Translates to: EKAPQDLRSNSTHTSSHVLCTGH*SQHLDG
Trigger: CCCATCCAGGTGCTGGCTGCAGTGGCCTGTGCAGAG...CACGTGACTCGATGTGTGGGTACTGTTACTCCTTAAATCCTGTGGGGCTTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR CCA 90 bp GGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTACCCACACATCGAGTTCTGGGGCTAGTCTCTaGCCCTCACTGCTCACGGCC +
Preference number: 2 (lower is better)
Translates to: GKEKAPQDLRSNSTHTSSSGASL*PSLLTA
Trigger: GGCCGTGAGCAGTGAGGGCCAGAGACTAGCCCCAGA...ACTCGATGTGTGGGTACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR CCA 90 bp AAATATCCTCCAGTGCCCACTGGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTGGGTGCCACTCTCTCTaGCATCCACCTGTCTGGGGC +
Preference number: 2 (lower is better)
Translates to: KYPPVPTGKEKAPQDLRSGCHSL*HPPVWG
Trigger: GCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCC...ACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCCAGTGGGCACTGGAGGATATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR CCA 90 bp GGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTACCCACACATCGAGTTTCCCTGTGGGCCACTaGGCTCAGAAGCAGCCTCCC +
Preference number: 2 (lower is better)
Translates to: GKEKAPQDLRSNSTHTSSFPVGH*AQKQPP
Trigger: GGGAGGCTGCTTCTGAGCCCAGTGGCCCACAGGGAA...ACTCGATGTGTGGGTACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR CCA 90 bp GAGAAAGCCCCACAGGATTTAAGGAGTAACAGTACCCACACATCGAGTCACGTGTTCCCTGTGGGCCACTaGGCTCAGAAGCAGCCTCCC +
Preference number: 2 (lower is better)
Translates to: EKAPQDLRSNSTHTSSHVFPVGH*AQKQPP
Trigger: GGGAGGCTGCTTCTGAGCCCAGTGGCCCACAGGGAA...CACGTGACTCGATGTGTGGGTACTGTTACTCCTTAAATCCTGTGGGGCTTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR TCA 90 bp CCTCCAGTGCCCACTGGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTCCCTTCTCGAGCAGATaGCACGAGCTAGTCCACGTT +
Preference number: 2 (lower is better)
Translates to: PPVPTGKEKAPQDLRSNSPFSSR*HELVHV
Trigger: AACGTGGACTAGCTCGTGTCATCTGCTCGAGAAGGG...ACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCCAGTGGGCACTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR GCA 90 bp GGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTACCCACACATCGAGTGGTGAGGGGGTCATCTaGCTGACCCACAGACAGGTG +
Preference number: 2 (lower is better)
Translates to: GKEKAPQDLRSNSTHTSSGEGVI*LTHRQV
Trigger: CACCTGTCTGTGGGTCAGGCAGATGACCCCCTCACC...ACTCGATGTGTGGGTACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR GCA 90 bp CCTCCAGTGCCCACTGGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTGTGGCCCACCTCACCTaGATCTTCTGTGAGTACCAC +
Preference number: 2 (lower is better)
Translates to: PPVPTGKEKAPQDLRSNSVAHLT*IFCEYH
Trigger: GTGGTACTCACAGAAGATGCAGGTGAGGTGGGCCAC...ACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCCAGTGGGCACTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR GCA 90 bp GGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTACCCACACATCGAGTACCGGGATAGCCGTCTaGGTGTGGACTTCGAGCGGT +
Preference number: 2 (lower is better)
Translates to: GKEKAPQDLRSNSTHTSSTGIAV*VWTSSG
Trigger: ACCGCTCGAAGTCCACACGCAGACGGCTATCCCGGT...ACTCGATGTGTGGGTACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR GCA 90 bp GGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTACCCACACATCGAGTGGGGTGGGGATGCAATaGCAAGGTGGGTTCCCTGTG +
Preference number: 2 (lower is better)
Translates to: GKEKAPQDLRSNSTHTSSGVGMQ*QGGFPV
Trigger: CACAGGGAACCCACCTTGGCATTGCATCCCCACCCC...ACTCGATGTGTGGGTACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR CCA 90 bp GGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTACCCACACATCGAGTCCTGAGGAGGTGGGGTaGGGATGCAATGCCAAGGTG +
Preference number: 2 (lower is better)
Translates to: GKEKAPQDLRSNSTHTSSPEEVG*GCNAKV
Trigger: CACCTTGGCATTGCATCCCCACCCCACCTCCTCAGG...ACTCGATGTGTGGGTACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR CCA 90 bp AAATATCCTCCAGTGCCCACTGGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTTCCTCCCTGAGGAGGTaGGGTGGGGATGCAATGCCA +
Preference number: 2 (lower is better)
Translates to: KYPPVPTGKEKAPQDLRSSSLRR*GGDAMP
Trigger: TGGCATTGCATCCCCACCCCACCTCCTCAGGGAGGA...ACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCCAGTGGGCACTGGAGGATATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR TCA 90 bp GAGAAAGCCCCACAGGATTTAAGGAGTAACAGTACCCACACATCGAGTCACGTGCACCTGCATCTTCTGTaGGTACCACCCCGGCATGGT +
Preference number: 2 (lower is better)
Translates to: EKAPQDLRSNSTHTSSHVHLHLL*VPPRHG
Trigger: ACCATGCCGGGGTGGTACTCACAGAAGATGCAGGTG...CACGTGACTCGATGTGTGGGTACTGTTACTCCTTAAATCCTGTGGGGCTTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR GCA 90 bp GGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTACCCACACATCGAGTCTTGCCTGGCATGGGTaGCACTCTCTCTGGCATCCA +
Preference number: 2 (lower is better)
Translates to: GKEKAPQDLRSNSTHTSSLAWHG*HSLWHP
Trigger: TGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAG...ACTCGATGTGTGGGTACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR CCA 90 bp CCTCCAGTGCCCACTGGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTGGCTCTCCTAGAAGGTaGAGGACAGACACAGGAGAA +
Preference number: 2 (lower is better)
Translates to: PPVPTGKEKAPQDLRSNSGSPRR*RTDTGE
Trigger: TTCTCCTGTGTCTGTCCTCCACCTTCTAGGAGAGCC...ACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCCAGTGGGCACTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR CCA 90 bp GGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTACCCACACATCGAGTGATGCAATGCCAAGGTaGGTTCCCTGTGGGCCACTG +
Preference number: 2 (lower is better)
Translates to: GKEKAPQDLRSNSTHTSSDAMPR*VPCGPL
Trigger: CAGTGGCCCACAGGGAACCCACCTTGGCATTGCATC...ACTCGATGTGTGGGTACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR TCA 90 bp GAGAAAGCCCCACAGGATTTAAGGAGTAACAGTACCCACACATCGAGTCACGTGCCCTTCTCGAGCAGATaGCACGAGCTAGTCCACGTT +
Preference number: 2 (lower is better)
Translates to: EKAPQDLRSNSTHTSSHVPFSSR*HELVHV
Trigger: AACGTGGACTAGCTCGTGTCATCTGCTCGAGAAGGG...CACGTGACTCGATGTGTGGGTACTGTTACTCCTTAAATCCTGTGGGGCTTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR GCA 90 bp GAGAAAGCCCCACAGGATTTAAGGAGTAACAGTACCCACACATCGAGTCACGTGGTGGCCCACCTCACCTaGATCTTCTGTGAGTACCAC +
Preference number: 2 (lower is better)
Translates to: EKAPQDLRSNSTHTSSHVVAHLT*IFCEYH
Trigger: GTGGTACTCACAGAAGATGCAGGTGAGGTGGGCCAC...CACGTGACTCGATGTGTGGGTACTGTTACTCCTTAAATCCTGTGGGGCTTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR CCA 90 bp GGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTACCCACACATCGAGTATAGCCGTCTGCGTGTaGACTTCGAGCGGTTCGTGT +
Preference number: 2 (lower is better)
Translates to: GKEKAPQDLRSNSTHTSSIAVCV*TSSGSC
Trigger: ACACGAACCGCTCGAAGTCCACACGCAGACGGCTAT...ACTCGATGTGTGGGTACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR CCA 90 bp GAGAAAGCCCCACAGGATTTAAGGAGTAACAGTACCCACACATCGAGTCACGTGATAGCCGTCTGCGTGTaGACTTCGAGCGGTTCGTGT +
Preference number: 2 (lower is better)
Translates to: EKAPQDLRSNSTHTSSHVIAVCV*TSSGSC
Trigger: ACACGAACCGCTCGAAGTCCACACGCAGACGGCTAT...CACGTGACTCGATGTGTGGGTACTGTTACTCCTTAAATCCTGTGGGGCTTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR CCA 90 bp ACATGTTTTATTATCCTGTCCCCAGAGGGTGGTTTATCCAGAAACCAAGAAAAACAAGGCCGGGGCTGGTaGGATGGGGTGCGGTTCAGG +
Preference number: 2 (lower is better)
Translates to: TCFIILSPEGGLSRNQEKQGRGW*DGVRFR
Trigger: CCTGAACCGCACCCCATCCCACCAGCCCCGGCCTTG...TTTTTCTTGGTTTCTGGATAAACCACCCTCTGGGGACAGGATAATAAAACATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR CCA 90 bp AAATATCCTCCAGTGCCCACTGGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTGGCTCTCCTAGAAGGTaGAGGACAGACACAGGAGAA +
Preference number: 2 (lower is better)
Translates to: KYPPVPTGKEKAPQDLRSGSPRR*RTDTGE
Trigger: TTCTCCTGTGTCTGTCCTCCACCTTCTAGGAGAGCC...ACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCCAGTGGGCACTGGAGGATATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR CCA 90 bp AAATATCCTCCAGTGCCCACTGGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTCTTAGTGGATGGAGGTaGCCACCTTCTCCTAGGATC +
Preference number: 2 (lower is better)
Translates to: KYPPVPTGKEKAPQDLRSLSGWR*PPSPRI
Trigger: GATCCTAGGAGAAGGTGGCCACCTCCATCCACTAAG...ACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCCAGTGGGCACTGGAGGATATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR CCA 90 bp GGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTACCCACACATCGAGTCTTAGTGGATGGAGGTaGCCACCTTCTCCTAGGATC +
Preference number: 2 (lower is better)
Translates to: GKEKAPQDLRSNSTHTSSLSGWR*PPSPRI
Trigger: GATCCTAGGAGAAGGTGGCCACCTCCATCCACTAAG...ACTCGATGTGTGGGTACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR TCA 90 bp AAATATCCTCCAGTGCCCACTGGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTCGAGCTAGTCCACGTTaGCAGCTTAAGACAGTGCTA +
Preference number: 2 (lower is better)
Translates to: KYPPVPTGKEKAPQDLRSRASPR*QLKTVL
Trigger: TAGCACTGTCTTAAGCTGTCAACGTGGACTAGCTCG...ACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCCAGTGGGCACTGGAGGATATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR CCA 90 bp AAATATCCTCCAGTGCCCACTGGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTCCTGTCCCCAGAGGGTaGTTTATCCAGAAACCAAGA +
Preference number: 2 (lower is better)
Translates to: KYPPVPTGKEKAPQDLRSPVPRG*FIQKPR
Trigger: TCTTGGTTTCTGGATAAACCACCCTCTGGGGACAGG...ACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCCAGTGGGCACTGGAGGATATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR CAA 90 bp CCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGAATCGGCTATAGGCCGTCGGGGGTGTaGGGTCAGGTCTCTGGGGCC +
Preference number: 3 (lower is better)
Translates to: PTQTRRSISKGPGQRIGYRPSGV*GQVSGA
Trigger: GGCCCCAGAGACCTGACCCAACACCCCCGACGGCCT...ATAGCCGATTCTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR CAA 90 bp CTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCCTCACTGCTCACGGCCGGGTAGGCCGTCGGGGGTGTaGGGTCAGGTCTCTGGGGCC +
Preference number: 3 (lower is better)
Translates to: LASTCLGLVSGPHCSRPGRPSGV*GQVSGA
Trigger: GGCCCCAGAGACCTGACCCAACACCCCCGACGGCCT...ACCCGGCCGTGAGCAGTGAGGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR CAA 90 bp GATGGAGGTGGCCACCTTCTCCTAGGATCTCCGGATGGGCGCACCTGCTGCTCAAGGCCGTCGGGGGTGTaGGGTCAGGTCTCTGGGGCC +
Preference number: 3 (lower is better)
Translates to: DGGGHLLLGSPDGRTCCSRPSGV*GQVSGA
Trigger: GGCCCCAGAGACCTGACCCAACACCCCCGACGGCCT...TGAGCAGCAGGTGCGCCCATCCGGAGATCCTAGGAGAAGGTGGCCACCTCCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR CCA 72 bp CCCTCACCAGCCGCTACCGGGATAGCCGTCTGCGTGTaGACTTCGAGCGGTTCGTGTCCTGTGTGGCCCACC +
Preference number: 3 (lower is better)
Translates to: PSPAATGIAVCV*TSSGSCPVWPT
Trigger: GGTGGGCCACACAGGACACGAACCGCTCGAAGTCCACACGCAGACGGCTATCCCGGTAGCGGCTGGTGAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR GCA 72 bp GCATCCACCTGTCTGGGGCTAGTCTCTGGCCCTCACTaGTCACGGCCGGGTGACCACTCTGGCCTGCGTACT +
Preference number: 3 (lower is better)
Translates to: ASTCLGLVSGPH*SRPGDHSGLRT
Trigger: AGTACGCAGGCCAGAGTGGTCACCCGGCCGTGAGCAGTGAGGGCCAGAGACTAGCCCCAGACAGGTGGATGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR GCA 72 bp CCCAGACCCTCACCAGCCGCTACCGGGATAGCCGTCTaGGTGTGGACTTCGAGCGGTTCGTGTCCTGTGTGG +
Preference number: 3 (lower is better)
Translates to: PRPSPAATGIAV*VWTSSGSCPVW
Trigger: CCACACAGGACACGAACCGCTCGAAGTCCACACGCAGACGGCTATCCCGGTAGCGGCTGGTGAGGGTCTGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR CCA 72 bp GGATGGAGGTGGCCACCTTCTCCTAGGATCTCCGGATaGGCGCACCTGCTGCTCAGGGCAGGGTTGCTGAGC +
Preference number: 3 (lower is better)
Translates to: GWRWPPSPRISG*AHLLLRAGLLS
Trigger: GCTCAGCAACCCTGCCCTGAGCAGCAGGTGCGCCCATCCGGAGATCCTAGGAGAAGGTGGCCACCTCCATCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR CCA 72 bp GCTGAGCAAGACCACCTCCCTAGGCCTTGCCTGGCATaGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGG +
Preference number: 3 (lower is better)
Translates to: AEQDHLPRPCLA*VPLSLASTCLG
Trigger: CCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCCTAGGGAGGTGGTCTTGCTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR CCA 72 bp GGGATGCAATGCCAAGGTGGGTTCCCTGTGGGCCACTaGGCTCAGAAGCAGCCTCCCCCTAGGCTTCCACCT +
Preference number: 3 (lower is better)
Translates to: GMQCQGGFPVGH*AQKQPPPRLPP
Trigger: AGGTGGAAGCCTAGGGGGAGGCTGCTTCTGAGCCCAGTGGCCCACAGGGAACCCACCTTGGCATTGCATCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR CCA 72 bp CCCTGTGGCATTCATGTCCTCCCTGAGGAGGTGGGGTaGGGATGCAATGCCAAGGTGGGTTCCCTGTGGGCC +
Preference number: 3 (lower is better)
Translates to: PCGIHVLPEEVG*GCNAKVGSLWA
Trigger: GGCCCACAGGGAACCCACCTTGGCATTGCATCCCCACCCCACCTCCTCAGGGAGGACATGAATGCCACAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR GCA 72 bp GCCCAGAGGATTGAAGGGATCAGCCTGTACTCACCCTaGCGGGATGGGGCAGAGTTGGGGTGTGACACCCTG +
Preference number: 3 (lower is better)
Translates to: AQRIEGISLYSP*RDGAELGCDTL
Trigger: CAGGGTGTCACACCCCAACTCTGCCCCATCCCGGCAGGGTGAGTACAGGCTGATCCCTTCAATCCTCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR CCA 72 bp TCAGCCTGTACTCACCCTGCCGGGATGGGGCAGAGTTaGGGTGTGACACCCTGTGGCATTCATGTCCTCCCT +
Preference number: 3 (lower is better)
Translates to: SACTHPAGMGQS*GVTPCGIHVLP
Trigger: AGGGAGGACATGAATGCCACAGGGTGTCACACCCCAACTCTGCCCCATCCCGGCAGGGTGAGTACAGGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR CCA 72 bp GTCTGCGTGTGGACTTCGAGCGGTTCGTGTCCTGTGTaGCCCACCTCACCTGCATCTTCTGTGAGTACCACC +
Preference number: 3 (lower is better)
Translates to: VCVWTSSGSCPV*PTSPASSVSTT
Trigger: GGTGGTACTCACAGAAGATGCAGGTGAGGTGGGCCACACAGGACACGAACCGCTCGAAGTCCACACGCAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR CAA 90 bp GGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTACCCACACATCGAGTAGGCCGTCGGGGGTGTaGGGTCAGGTCTCTGGGGCC +
Preference number: 3 (lower is better)
Translates to: GKEKAPQDLRSNSTHTSSRPSGV*GQVSGA
Trigger: GGCCCCAGAGACCTGACCCAACACCCCCGACGGCCT...ACTCGATGTGTGGGTACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR CAA 90 bp CCTCCAGTGCCCACTGGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTCGGGATGGGGCAGAGTaGGGGTGTGACACCCTGTGG +
Preference number: 3 (lower is better)
Translates to: PPVPTGKEKAPQDLRSNSRDGAE*GCDTLW
Trigger: CCACAGGGTGTCACACCCCAACTCTGCCCCATCCCG...ACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCCAGTGGGCACTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR TCA 72 bp GTCCGTTTGATGGATGAGGAAACAGGCCCAGAGGATTaGAGGGATCAGCCTGTACTCACCCTGCCGGGATGG +
Preference number: 3 (lower is better)
Translates to: VRLMDEETGPED*RDQPVLTLPGW
Trigger: CCATCCCGGCAGGGTGAGTACAGGCTGATCCCTTCAATCCTCTGGGCCTGTTTCCTCATCCATCAAACGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR-3UTR CAA 90 bp GGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTACCCACACATCGAGTCTGCTCAGGGCAGGGTaGCTGAGCAAGACCACCTCC +
Preference number: 3 (lower is better)
Translates to: GKEKAPQDLRSNSTHTSSLLRAG*LSKTTS
Trigger: GGAGGTGGTCTTGCTCAGCAACCCTGCCCTGAGCAG...ACTCGATGTGTGGGTACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR TCA 72 bp AGGGGCCCGGGCAGAGAATCGGCTATGTCTTCATTATaGGAGCAGGAGAGACGGCAGAGATATGTTGCTAGG +
Preference number: 3 (lower is better)
Translates to: RGPGRESAMSSL*EQERRQRYVAR
Trigger: CCTAGCAACATATCTCTGCCGTCTCTCCTGCTCTCATAATGAAGACATAGCCGATTCTCTGCCCGGGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR TCA 72 bp CAGAAACAAGAACAGCGACAGCCCTTCTCGAGCAGATaGCACGAGCTAGTCCACGTTGACAGCTTAAGACAG +
Preference number: 3 (lower is better)
Translates to: QKQEQRQPFSSR*HELVHVDSLRQ
Trigger: CTGTCTTAAGCTGTCAACGTGGACTAGCTCGTGTCATCTGCTCGAGAAGGGCTGTCGCTGTTCTTGTTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR GCA 90 bp AGACCCACGCCCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGCCATGTAGTCGCCCATaGTGCCCCCGCCGCCAGCGC +
Preference number: 4 (lower is better)
Translates to: RPTPDADPEEHQQGARAEPCSRP*CPRRQR
Trigger: GCGCTGGCGGCGGGGGCAGCATGGGCGACTACATGG...CTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGGCGTGGGTCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR GCA 90 bp AGACCCACGCCCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGCGCCATTGCCCGCGCTaGTGGGGCCGTACTGGTACG +
Preference number: 4 (lower is better)
Translates to: RPTPDADPEEHQQGARAERHCPR*WGRTGT
Trigger: CGTACCAGTACGGCCCCAGCAGCGCGGGCAATGGCG...CTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGGCGTGGGTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR GCA 90 bp AGACCCACGCCCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGTGTAGTCGCCCATGCTaGCCCCGCCGCCAGCGCCAT +
Preference number: 4 (lower is better)
Translates to: RPTPDADPEEHQQGARAECSRPC*PRRQRH
Trigger: ATGGCGCTGGCGGCGGGGGCAGCATGGGCGACTACA...CTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGGCGTGGGTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CCA 90 bp GTCCCCAGAGACCCACGCCCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCCTGCTGGGGCCGTACTaGTACGACTGGTTCGCCGCG +
Preference number: 4 (lower is better)
Translates to: VPRDPRPTQTRRSISKGPLLGPY*YDWFAA
Trigger: CGCGGCGAACCAGTCGTACCAGTACGGCCCCAGCAG...GGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGGCGTGGGTCTCTGGGGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CCA 90 bp AGACCCACGCCCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGGCCCACCTCCACCTCTaGAGGGTCCCCAGAGACCCA +
Preference number: 4 (lower is better)
Translates to: RPTPDADPEEHQQGARAEAHLHL*RVPRDP
Trigger: TGGGTCTCTGGGGACCCTCCAGAGGTGGAGGTGGGC...CTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGGCGTGGGTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR GCA 90 bp GTCCCCAGAGACCCACGCCCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCCTCTGCACAGGCCACTaGAGCCAGCACCTGGATGGG +
Preference number: 4 (lower is better)
Translates to: VPRDPRPTQTRRSISKGPLCTGH*SQHLDG
Trigger: CCCATCCAGGTGCTGGCTGCAGTGGCCTGTGCAGAG...GGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGGCGTGGGTCTCTGGGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp AGACCCACGCCCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGTCTGGGGCTAGTCTCTaGCCCTCACTGCTCACGGCC +
Preference number: 4 (lower is better)
Translates to: RPTPDADPEEHQQGARAESGASL*PSLLTA
Trigger: GGCCGTGAGCAGTGAGGGCCAGAGACTAGCCCCAGA...CTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGGCGTGGGTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp GTCCCCAGAGACCCACGCCCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCACTGCAGCCAGCACCTaGATGGGGGTGAGGGGGTCA +
Preference number: 4 (lower is better)
Translates to: VPRDPRPTQTRRSISKGPTAAST*MGVRGS
Trigger: TGACCCCCTCACCCCCATCCAGGTGCTGGCTGCAGT...GGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGGCGTGGGTCTCTGGGGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR TCA 90 bp CTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCCTCACTGCTCACGGCCGGGTCTGCTCACGGCCGGGTaGCCACTCTGGCCTGCGTAC +
Preference number: 4 (lower is better)
Translates to: LASTCLGLVSGPHCSRPGLLTAG*PLWPAY
Trigger: GTACGCAGGCCAGAGTGGTCACCCGGCCGTGAGCAG...ACCCGGCCGTGAGCAGTGAGGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR GCA 90 bp CCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGAATCGGCTATCGCCATTGCCCGCGCTaGTGGGGCCGTACTGGTACG +
Preference number: 4 (lower is better)
Translates to: PTQTRRSISKGPGQRIGYRHCPR*WGRTGT
Trigger: CGTACCAGTACGGCCCCAGCAGCGCGGGCAATGGCG...ATAGCCGATTCTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR GCA 90 bp GTCCCCAGAGACCCACGCCCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGTCCTGCGAGCTCCCTaGCTCAAGCCACTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: VPRDPRPTQTRRSISKGPVLRAP*LKPLSS
Trigger: GGAAGACAGTGGCTTGAGGCAGGGAGCTCGCAGGAC...GGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGGCGTGGGTCTCTGGGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR GCA 90 bp GTCCCCAGAGACCCACGCCCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGTGAGGGGGTCATCTaGCTGACCCACAGACAGGTG +
Preference number: 4 (lower is better)
Translates to: VPRDPRPTQTRRSISKGPGEGVI*LTHRQV
Trigger: CACCTGTCTGTGGGTCAGGCAGATGACCCCCTCACC...GGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGGCGTGGGTCTCTGGGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR GCA 90 bp AGACCCACGCCCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGACCGGGATAGCCGTCTaGGTGTGGACTTCGAGCGGT +
Preference number: 4 (lower is better)
Translates to: RPTPDADPEEHQQGARAETGIAV*VWTSSG
Trigger: ACCGCTCGAAGTCCACACGCAGACGGCTATCCCGGT...CTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGGCGTGGGTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR GCA 90 bp AGACCCACGCCCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGGGGGTGGGGATGCAATaGCAAGGTGGGTTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: RPTPDADPEEHQQGARAEGVGMQ*QGGFPV
Trigger: CACAGGGAACCCACCTTGGCATTGCATCCCCACCCC...CTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGGCGTGGGTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp CTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCCTCACTGCTCACGGCCGGGTCAAGGCCGGGGCTGGTaGGATGGGGTGCGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: LASTCLGLVSGPHCSRPGQGRGW*DGVRFR
Trigger: CCTGAACCGCACCCCATCCCACCAGCCCCGGCCTTG...ACCCGGCCGTGAGCAGTGAGGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp AGACCCACGCCCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGTCCCTAGGCCTTGCCTaGCATGGGTGCCACTCTCTC +
Preference number: 4 (lower is better)
Translates to: RPTPDADPEEHQQGARAESLGLA*HGCHSL
Trigger: GAGAGAGTGGCACCCATGCCAGGCAAGGCCTAGGGA...CTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGGCGTGGGTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp GTCCCCAGAGACCCACGCCCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCCCTGAGGAGGTGGGGTaGGGATGCAATGCCAAGGTG +
Preference number: 4 (lower is better)
Translates to: VPRDPRPTQTRRSISKGPPEEVG*GCNAKV
Trigger: CACCTTGGCATTGCATCCCCACCCCACCTCCTCAGG...GGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGGCGTGGGTCTCTGGGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR GCA 90 bp AGACCCACGCCCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGGTGGGAGTTGCACCATaGCGTGAAGGTCTTGCGCTG +
Preference number: 4 (lower is better)
Translates to: RPTPDADPEEHQQGARAEVGVAP*REGLAL
Trigger: CAGCGCAAGACCTTCACGGCATGGTGCAACTCCCAC...CTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGGCGTGGGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR GCA 90 bp CTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCCTCACTGCTCACGGCCGGGTGTCTCTGGCCCTCACTaGTCACGGCCGGGTGACCAC +
Preference number: 4 (lower is better)
Translates to: LASTCLGLVSGPHCSRPGVSGPH*SRPGDH
Trigger: GTGGTCACCCGGCCGTGAGCAGTGAGGGCCAGAGAC...ACCCGGCCGTGAGCAGTGAGGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR GCA 90 bp AGGATCTCCGGATGGGCGCACCTGCTGCTCAGGGCAGGGTTGCTGAGCAAGACCCCGGATGGGCGCACCTaGTGCTCAGGGCAGGGTTGC +
Preference number: 4 (lower is better)
Translates to: RISGWAHLLLRAGLLSKTPDGRT*CSGQGC
Trigger: GCAACCCTGCCCTGAGCAGCAGGTGCGCCCATCCGG...GGTCTTGCTCAGCAACCCTGCCCTGAGCAGCAGGTGCGCCCATCCGGAGATCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR GCA 90 bp GGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCCCCGGATGGGCGCACCTaGTGCTCAGGGCAGGGTTGC +
Preference number: 4 (lower is better)
Translates to: GMGATLSGIHLSGASLWPPDGRT*CSGQGC
Trigger: GCAACCCTGCCCTGAGCAGCAGGTGCGCCCATCCGG...GGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR GCA 90 bp CCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGAATCGGCTATCACCCTGCCCCTCTCTaGACAGGCCACTGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: PTQTRRSISKGPGQRIGYHPAPL*TGHCSQ
Trigger: CTGGCTGCAGTGGCCTGTGCAGAGAGGGGCAGGGTG...ATAGCCGATTCTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp GTCCCCAGAGACCCACGCCCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCACTCCAGGAGGTCGCTaGCCAGCTTCTCGTAGTCCT +
Preference number: 4 (lower is better)
Translates to: VPRDPRPTQTRRSISKGPTPGGR*PASRSP
Trigger: AGGACTACGAGAAGCTGGCCAGCGACCTCCTGGAGT...GGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGGCGTGGGTCTCTGGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CCA 90 bp AGGATCTCCGGATGGGCGCACCTGCTGCTCAGGGCAGGGTTGCTGAGCAAGACCGGCCGTCGGGGGTGTTaGGTCAGGTCTCTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: RISGWAHLLLRAGLLSKTGRRGC*VRSLGP
Trigger: AGGCCCCAGAGACCTGACCCAACACCCCCGACGGCC...GGTCTTGCTCAGCAACCCTGCCCTGAGCAGCAGGTGCGCCCATCCGGAGATCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp AGGATCTCCGGATGGGCGCACCTGCTGCTCAGGGCAGGGTTGCTGAGCAAGACCCAAGGCCGGGGCTGGTaGGATGGGGTGCGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: RISGWAHLLLRAGLLSKTQGRGW*DGVRFR
Trigger: CCTGAACCGCACCCCATCCCACCAGCCCCGGCCTTG...GGTCTTGCTCAGCAACCCTGCCCTGAGCAGCAGGTGCGCCCATCCGGAGATCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp GCCGCTACCGGGATAGCCGTCTGCGTGTGGACTTCGAGCGGTTCGTGTCCTGTGGGGTACGGGGACTGGTaGGCACTCACCCTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: AATGIAVCVWTSSGSCPVGYGDW*ALTLPL
Trigger: GAGGGGCAGGGTGAGTGCCCACCAGTCCCCGTACCC...CACAGGACACGAACCGCTCGAAGTCCACACGCAGACGGCTATCCCGGTAGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp AGACCCACGCCCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGGATGCAATGCCAAGGTaGGTTCCCTGTGGGCCACTG +
Preference number: 4 (lower is better)
Translates to: RPTPDADPEEHQQGARAEDAMPR*VPCGPL
Trigger: CAGTGGCCCACAGGGAACCCACCTTGGCATTGCATC...CTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGGCGTGGGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp GTCCCCAGAGACCCACGCCCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCTCCTCCAGTGCCCACTaGCAAGGAGAAAGCCCCACA +
Preference number: 4 (lower is better)
Translates to: VPRDPRPTQTRRSISKGPSSSAH*QGESPT
Trigger: TGTGGGGCTTTCTCCTTGCCAGTGGGCACTGGAGGA...GGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGGCGTGGGTCTCTGGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR TCA 90 bp GTCCCCAGAGACCCACGCCCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCCCCTTCTCGAGCAGATaGCACGAGCTAGTCCACGTT +
Preference number: 4 (lower is better)
Translates to: VPRDPRPTQTRRSISKGPPFSSR*HELVHV
Trigger: AACGTGGACTAGCTCGTGTCATCTGCTCGAGAAGGG...GGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGGCGTGGGTCTCTGGGGAC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR GCA 90 bp CTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCCTCACTGCTCACGGCCGGGTGTGAAGGTCTTGCGCTaGTGCTTCTCCCAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: LASTCLGLVSGPHCSRPGVKVLR*CFSQAG
Trigger: CCCGGCCTGGGAGAAGCAGCAGCGCAAGACCTTCAC...ACCCGGCCGTGAGCAGTGAGGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR GCA 90 bp CCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCGGATGGGCGCACCTaGTGCTCAGGGCAGGGTTGC +
Preference number: 4 (lower is better)
Translates to: PGMGATLSGIHLSGASLWPDGRT*CSGQGC
Trigger: GCAACCCTGCCCTGAGCAGCAGGTGCGCCCATCCGG...CCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR GCA 90 bp GTCCCCAGAGACCCACGCCCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGTGGCCCACCTCACCTaGATCTTCTGTGAGTACCAC +
Preference number: 4 (lower is better)
Translates to: VPRDPRPTQTRRSISKGPVAHLT*IFCEYH
Trigger: GTGGTACTCACAGAAGATGCAGGTGAGGTGGGCCAC...GGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGGCGTGGGTCTCTGGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp GATGGAGGTGGCCACCTTCTCCTAGGATCTCCGGATGGGCGCACCTGCTGCTCAGGCCGTCGGGGGTGTTaGGTCAGGTCTCTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: DGGGHLLLGSPDGRTCCSGRRGC*VRSLGP
Trigger: AGGCCCCAGAGACCTGACCCAACACCCCCGACGGCC...TGAGCAGCAGGTGCGCCCATCCGGAGATCCTAGGAGAAGGTGGCCACCTCCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp GCCGCTACCGGGATAGCCGTCTGCGTGTGGACTTCGAGCGGTTCGTGTCCTGTGGCCCACCTCCACCTCTaGAGGGTCCCCAGAGACCCA +
Preference number: 4 (lower is better)
Translates to: AATGIAVCVWTSSGSCPVAHLHL*RVPRDP
Trigger: TGGGTCTCTGGGGACCCTCCAGAGGTGGAGGTGGGC...CACAGGACACGAACCGCTCGAAGTCCACACGCAGACGGCTATCCCGGTAGCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp AGGATCTCCGGATGGGCGCACCTGCTGCTCAGGGCAGGGTTGCTGAGCAAGACCGCCCACCTCCACCTCTaGAGGGTCCCCAGAGACCCA +
Preference number: 4 (lower is better)
Translates to: RISGWAHLLLRAGLLSKTAHLHL*RVPRDP
Trigger: TGGGTCTCTGGGGACCCTCCAGAGGTGGAGGTGGGC...GGTCTTGCTCAGCAACCCTGCCCTGAGCAGCAGGTGCGCCCATCCGGAGATCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp CTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCCTCACTGCTCACGGCCGGGTTCTGGGGCTAGTCTCTaGCCCTCACTGCTCACGGCC +
Preference number: 4 (lower is better)
Translates to: LASTCLGLVSGPHCSRPGSGASL*PSLLTA
Trigger: GGCCGTGAGCAGTGAGGGCCAGAGACTAGCCCCAGA...ACCCGGCCGTGAGCAGTGAGGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp CTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCCTCACTGCTCACGGCCGGGTGGGTGCCACTCTCTCTaGCATCCACCTGTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: LASTCLGLVSGPHCSRPGGCHSL*HPPVWG
Trigger: GCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCC...ACCCGGCCGTGAGCAGTGAGGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp CCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGAATCGGCTATCCTAGGATCTCCGGATaGGCGCACCTGCTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: PTQTRRSISKGPGQRIGYPRISG*AHLLLR
Trigger: CCTGAGCAGCAGGTGCGCCCATCCGGAGATCCTAGG...ATAGCCGATTCTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp CTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCCTCACTGCTCACGGCCGGGTACTGCAGCCAGCACCTaGATGGGGGTGAGGGGGTCA +
Preference number: 4 (lower is better)
Translates to: LASTCLGLVSGPHCSRPGTAAST*MGVRGS
Trigger: TGACCCCCTCACCCCCATCCAGGTGCTGGCTGCAGT...ACCCGGCCGTGAGCAGTGAGGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp GTCCCCAGAGACCCACGCCCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCATAGCCGTCTGCGTGTaGACTTCGAGCGGTTCGTGT +
Preference number: 4 (lower is better)
Translates to: VPRDPRPTQTRRSISKGPIAVCV*TSSGSC
Trigger: ACACGAACCGCTCGAAGTCCACACGCAGACGGCTAT...GGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGGCGTGGGTCTCTGGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR CAA 72 bp ATCTCCGGATGGGCGCACCTGCTGCTCAGGGCAGGGTaGCTGAGCAAGACCACCTCCCTAGGCCTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: ISGWAHLLLRAG*LSKTTSLGLAW
Trigger: CCAGGCAAGGCCTAGGGAGGTGGTCTTGCTCAGCAACCCTGCCCTGAGCAGCAGGTGCGCCCATCCGGAGAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR TCA 90 bp GGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCCCCCAGCGCCCCGCCATaGTCCTTGTCGAAGTGGTTG +
Preference number: 4 (lower is better)
Translates to: GMGATLSGIHLSGASLWPPSAPP*SLSKWL
Trigger: CAACCACTTCGACAAGGATCATGGCGGGGCGCTGGG...GGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000252699.7
ENST00000634960.2
CDS-3UTR GCA 90 bp GCCGCTACCGGGATAGCCGTCTGCGTGTGGACTTCGAGCGGTTCGTGTCCTGTGGTGAAGGTCTTGCGCTaGTGCTTCTCCCAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: AATGIAVCVWTSSGSCPVVKVLR*CFSQAG
Trigger: CCCGGCCTGGGAGAAGCAGCAGCGCAAGACCTTCAC...CACAGGACACGAACCGCTCGAAGTCCACACGCAGACGGCTATCCCGGTAGCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR GCA 90 bp AGACCCACGCCCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGGTCCACAATCTCTTCTaGCCCGATGGAGACCAGCTT +
Preference number: 4 (lower is better)
Translates to: RPTPDADPEEHQQGARAEVHNLF*PDGDQL
Trigger: AAGCTGGTCTCCATCGGGGCAGAAGAGATTGTGGAC...CTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGGCGTGGGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR GCA 90 bp GTCCCCAGAGACCCACGCCCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGTCCACAATCTCTTCTaGCCCGATGGAGACCAGCTT +
Preference number: 4 (lower is better)
Translates to: VPRDPRPTQTRRSISKGPVHNLF*PDGDQL
Trigger: AAGCTGGTCTCCATCGGGGCAGAAGAGATTGTGGAC...GGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGGCGTGGGTCTCTGGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR GCA 90 bp GGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCCAACTCGGCCTCACCCTaGCGGTCGTTCTCCACGTCG +
Preference number: 4 (lower is better)
Translates to: GMGATLSGIHLSGASLWPNSASP*RSFSTS
Trigger: CGACGTGGAGAACGACCGGCAGGGTGAGGCCGAGTT...GGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252699.7
ENST00000634960.2
CDS-3UTR GCA 90 bp GTCCCCAGAGACCCACGCCCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGTGACCACTCTGGCCTaGGTACTCCTCACTCAGAAA +
Preference number: 4 (lower is better)
Translates to: VPRDPRPTQTRRSISKGPVTTLA*VLLTQK
Trigger: TTTCTGAGTGAGGAGTACGCAGGCCAGAGTGGTCAC...GGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGGCGTGGGTCTCTGGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR GCA 90 bp AGGATCTCCGGATGGGCGCACCTGCTGCTCAGGGCAGGGTTGCTGAGCAAGACCGCTCAGGCTCTGTCCTaGGAGCTCCCTGCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: RISGWAHLLLRAGLLSKTAQALS*ELPASS
Trigger: GCTTGAGGCAGGGAGCTCGCAGGACAGAGCCTGAGC...GGTCTTGCTCAGCAACCCTGCCCTGAGCAGCAGGTGCGCCCATCCGGAGATCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR GCA 90 bp CTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCCTCACTGCTCACGGCCGGGTGGTGAGGGGGTCATCTaGCTGACCCACAGACAGGTG +
Preference number: 4 (lower is better)
Translates to: LASTCLGLVSGPHCSRPGGEGVI*LTHRQV
Trigger: CACCTGTCTGTGGGTCAGGCAGATGACCCCCTCACC...ACCCGGCCGTGAGCAGTGAGGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR GCA 90 bp GGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCCCTCTGCACAGGCCACTaGAGCCAGCACCTGGATGGG +
Preference number: 4 (lower is better)
Translates to: GMGATLSGIHLSGASLWPLCTGH*SQHLDG
Trigger: CCCATCCAGGTGCTGGCTGCAGTGGCCTGTGCAGAG...GGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR GCA 90 bp CCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCACCCTGCCCCTCTCTaGACAGGCCACTGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: PGMGATLSGIHLSGASLWHPAPL*TGHCSQ
Trigger: CTGGCTGCAGTGGCCTGTGCAGAGAGGGGCAGGGTG...CCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR GCA 90 bp CCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGGGTGGGCACTCACCCTaGCCCTCTCTGCACAGGCCA +
Preference number: 4 (lower is better)
Translates to: PGMGATLSGIHLSGASLWGGHSP*PSLHRP
Trigger: TGGCCTGTGCAGAGAGGGGCAGGGTGAGTGCCCACC...CCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR GCA 90 bp GATGGAGGTGGCCACCTTCTCCTAGGATCTCCGGATGGGCGCACCTGCTGCTCAGGTGGGCACTCACCCTaGCCCTCTCTGCACAGGCCA +
Preference number: 4 (lower is better)
Translates to: DGGGHLLLGSPDGRTCCSGGHSP*PSLHRP
Trigger: TGGCCTGTGCAGAGAGGGGCAGGGTGAGTGCCCACC...TGAGCAGCAGGTGCGCCCATCCGGAGATCCTAGGAGAAGGTGGCCACCTCCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR GCA 90 bp CCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGAATCGGCTATACCGGGATAGCCGTCTaGGTGTGGACTTCGAGCGGT +
Preference number: 4 (lower is better)
Translates to: PTQTRRSISKGPGQRIGYTGIAV*VWTSSG
Trigger: ACCGCTCGAAGTCCACACGCAGACGGCTATCCCGGT...ATAGCCGATTCTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp CTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCCTCACTGCTCACGGCCGGGTGAAGGAGCCCTTCCTTaGCCGAGGTCTCTTCCACGG +
Preference number: 4 (lower is better)
Translates to: LASTCLGLVSGPHCSRPGEGALP*PRSLPR
Trigger: CCGTGGAAGAGACCTCGGCCAAGGAAGGGCTCCTTC...ACCCGGCCGTGAGCAGTGAGGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CCA 90 bp AGGATCTCCGGATGGGCGCACCTGCTGCTCAGGGCAGGGTTGCTGAGCAAGACCTCTGGGGCTAGTCTCTaGCCCTCACTGCTCACGGCC +
Preference number: 4 (lower is better)
Translates to: RISGWAHLLLRAGLLSKTSGASL*PSLLTA
Trigger: GGCCGTGAGCAGTGAGGGCCAGAGACTAGCCCCAGA...GGTCTTGCTCAGCAACCCTGCCCTGAGCAGCAGGTGCGCCCATCCGGAGATCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp GCCGCTACCGGGATAGCCGTCTGCGTGTGGACTTCGAGCGGTTCGTGTCCTGTGCCTAGGATCTCCGGATaGGCGCACCTGCTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: AATGIAVCVWTSSGSCPVPRISG*AHLLLR
Trigger: CCTGAGCAGCAGGTGCGCCCATCCGGAGATCCTAGG...CACAGGACACGAACCGCTCGAAGTCCACACGCAGACGGCTATCCCGGTAGCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp GGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCCCCTAGGATCTCCGGATaGGCGCACCTGCTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: GMGATLSGIHLSGASLWPPRISG*AHLLLR
Trigger: CCTGAGCAGCAGGTGCGCCCATCCGGAGATCCTAGG...GGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp AGACCCACGCCCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGCTTAGTGGATGGAGGTaGCCACCTTCTCCTAGGATC +
Preference number: 4 (lower is better)
Translates to: RPTPDADPEEHQQGARAELSGWR*PPSPRI
Trigger: GATCCTAGGAGAAGGTGGCCACCTCCATCCACTAAG...CTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGGCGTGGGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp CTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCCTCACTGCTCACGGCCGGGTCCTGAGGAGGTGGGGTaGGGATGCAATGCCAAGGTG +
Preference number: 4 (lower is better)
Translates to: LASTCLGLVSGPHCSRPGPEEVG*GCNAKV
Trigger: CACCTTGGCATTGCATCCCCACCCCACCTCCTCAGG...ACCCGGCCGTGAGCAGTGAGGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR TCA 90 bp CTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCCTCACTGCTCACGGCCGGGTAGTTGCACCATGCCGTaGAGGTCTTGCGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LASTCLGLVSGPHCSRPGSCTMP*RSCAAA
Trigger: AGCAGCAGCGCAAGACCTTCACGGCATGGTGCAACT...ACCCGGCCGTGAGCAGTGAGGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR TCA 90 bp CCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGAATCGGCTATTGCTGCCCGACAGCTTaGTGTGGTTGCTCTCAGCGA +
Preference number: 4 (lower is better)
Translates to: PTQTRRSISKGPGQRIGYCCPTA*CGCSQR
Trigger: TCGCTGAGAGCAACCACATCAAGCTGTCGGGCAGCA...ATAGCCGATTCTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR TCA 90 bp ACTGCTCACGGCCGGGTGACCACTCTGGCCTGCGTACTCCTCACTCAGAAACAACTGCTCACGGCCGGGTaGCCACTCTGGCCTGCGTAC +
Preference number: 4 (lower is better)
Translates to: TAHGRVTTLACVLLTQKQLLTAG*PLWPAY
Trigger: GTACGCAGGCCAGAGTGGTCACCCGGCCGTGAGCAG...TTGTTTCTGAGTGAGGAGTACGCAGGCCAGAGTGGTCACCCGGCCGTGAGCAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR TCA 90 bp CCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGAATCGGCTATCACCTGCATCTTCTGTaGGTACCACCCCGGCATGGT +
Preference number: 4 (lower is better)
Translates to: PTQTRRSISKGPGQRIGYHLHLL*VPPRHG
Trigger: ACCATGCCGGGGTGGTACTCACAGAAGATGCAGGTG...ATAGCCGATTCTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR TCA 90 bp GGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCCGCAGTTTCAGCCTTCTaGGCCCCCGAGAAAGCGTGG +
Preference number: 4 (lower is better)
Translates to: GMGATLSGIHLSGASLWPAVSAF*APEKAW
Trigger: CCACGCTTTCTCGGGGGCTCAGAAGGCTGAAACTGC...GGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440400.2
CDS-3UTR GCA 90 bp CTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCCTCACTGCTCACGGCCGGGTGTGGGAGTTGCACCATaGCGTGAAGGTCTTGCGCTG +
Preference number: 4 (lower is better)
Translates to: LASTCLGLVSGPHCSRPGVGVAP*REGLAL
Trigger: CAGCGCAAGACCTTCACGGCATGGTGCAACTCCCAC...ACCCGGCCGTGAGCAGTGAGGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR GCA 90 bp GCCGCTACCGGGATAGCCGTCTGCGTGTGGACTTCGAGCGGTTCGTGTCCTGTGGTCCTGCGAGCTCCCTaGCTCAAGCCACTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: AATGIAVCVWTSSGSCPVVLRAP*LKPLSS
Trigger: GGAAGACAGTGGCTTGAGGCAGGGAGCTCGCAGGAC...CACAGGACACGAACCGCTCGAAGTCCACACGCAGACGGCTATCCCGGTAGCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR GCA 90 bp GGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCCGGTGAGGGGGTCATCTaGCTGACCCACAGACAGGTG +
Preference number: 4 (lower is better)
Translates to: GMGATLSGIHLSGASLWPGEGVI*LTHRQV
Trigger: CACCTGTCTGTGGGTCAGGCAGATGACCCCCTCACC...GGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR GCA 90 bp AGGATCTCCGGATGGGCGCACCTGCTGCTCAGGGCAGGGTTGCTGAGCAAGACCGGGGTGGGGATGCAATaGCAAGGTGGGTTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: RISGWAHLLLRAGLLSKTGVGMQ*QGGFPV
Trigger: CACAGGGAACCCACCTTGGCATTGCATCCCCACCCC...GGTCTTGCTCAGCAACCCTGCCCTGAGCAGCAGGTGCGCCCATCCGGAGATCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp AGGATCTCCGGATGGGCGCACCTGCTGCTCAGGGCAGGGTTGCTGAGCAAGACCGAAGGAGCCCTTCCTTaGCCGAGGTCTCTTCCACGG +
Preference number: 4 (lower is better)
Translates to: RISGWAHLLLRAGLLSKTEGALP*PRSLPR
Trigger: CCGTGGAAGAGACCTCGGCCAAGGAAGGGCTCCTTC...GGTCTTGCTCAGCAACCCTGCCCTGAGCAGCAGGTGCGCCCATCCGGAGATCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CCA 90 bp AGACCCACGCCCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGCGCGGATGTGCTCCATaGTATAGTTGGTGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: RPTPDADPEEHQQGARAERGCAP*YSWCAC
Trigger: ACAAGCACACCAACTATACCATGGAGCACATCCGCG...CTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGGCGTGGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp GTCCCCAGAGACCCACGCCCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCCCTGTCCCCAGAGGGTaGTTTATCCAGAAACCAAGA +
Preference number: 4 (lower is better)
Translates to: VPRDPRPTQTRRSISKGPPVPRG*FIQKPR
Trigger: TCTTGGTTTCTGGATAAACCACCCTCTGGGGACAGG...GGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGGCGTGGGTCTCTGGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp GATGGAGGTGGCCACCTTCTCCTAGGATCTCCGGATGGGCGCACCTGCTGCTCAGGGTGCCACTCTCTCTaGCATCCACCTGTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: DGGGHLLLGSPDGRTCCSGCHSL*HPPVWG
Trigger: GCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCC...TGAGCAGCAGGTGCGCCCATCCGGAGATCCTAGGAGAAGGTGGCCACCTCCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp GCCGCTACCGGGATAGCCGTCTGCGTGTGGACTTCGAGCGGTTCGTGTCCTGTGAGGCCTTGCCTGGCATaGGTGCCACTCTCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: AATGIAVCVWTSSGSCPVRPCLA*VPLSLA
Trigger: TGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCCT...CACAGGACACGAACCGCTCGAAGTCCACACGCAGACGGCTATCCCGGTAGCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp CCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGTTCCCTGTGGGCCACTaGGCTCAGAAGCAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: PGMGATLSGIHLSGASLWFPVGH*AQKQPP
Trigger: GGGAGGCTGCTTCTGAGCCCAGTGGCCCACAGGGAA...CCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp GCCGCTACCGGGATAGCCGTCTGCGTGTGGACTTCGAGCGGTTCGTGTCCTGTGCCTGAGGAGGTGGGGTaGGGATGCAATGCCAAGGTG +
Preference number: 4 (lower is better)
Translates to: AATGIAVCVWTSSGSCPVPEEVG*GCNAKV
Trigger: CACCTTGGCATTGCATCCCCACCCCACCTCCTCAGG...CACAGGACACGAACCGCTCGAAGTCCACACGCAGACGGCTATCCCGGTAGCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp AGGATCTCCGGATGGGCGCACCTGCTGCTCAGGGCAGGGTTGCTGAGCAAGACCTCCTCCCTGAGGAGGTaGGGTGGGGATGCAATGCCA +
Preference number: 4 (lower is better)
Translates to: RISGWAHLLLRAGLLSKTSSLRR*GGDAMP
Trigger: TGGCATTGCATCCCCACCCCACCTCCTCAGGGAGGA...GGTCTTGCTCAGCAACCCTGCCCTGAGCAGCAGGTGCGCCCATCCGGAGATCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR TCA 90 bp AGGATCTCCGGATGGGCGCACCTGCTGCTCAGGGCAGGGTTGCTGAGCAAGACCTGCTGCCCGACAGCTTaGTGTGGTTGCTCTCAGCGA +
Preference number: 4 (lower is better)
Translates to: RISGWAHLLLRAGLLSKTCCPTA*CGCSQR
Trigger: TCGCTGAGAGCAACCACATCAAGCTGTCGGGCAGCA...GGTCTTGCTCAGCAACCCTGCCCTGAGCAGCAGGTGCGCCCATCCGGAGATCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR TCA 90 bp CCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGAATCGGCTATCCCTTCTCGAGCAGATaGCACGAGCTAGTCCACGTT +
Preference number: 4 (lower is better)
Translates to: PTQTRRSISKGPGQRIGYPFSSR*HELVHV
Trigger: AACGTGGACTAGCTCGTGTCATCTGCTCGAGAAGGG...ATAGCCGATTCTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR TCA 90 bp CTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCCTCACTGCTCACGGCCGGGTCCCTTCTCGAGCAGATaGCACGAGCTAGTCCACGTT +
Preference number: 4 (lower is better)
Translates to: LASTCLGLVSGPHCSRPGPFSSR*HELVHV
Trigger: AACGTGGACTAGCTCGTGTCATCTGCTCGAGAAGGG...ACCCGGCCGTGAGCAGTGAGGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR GCA 90 bp TCTGGCCTGCGTACTCCTCACTCAGAAACAAGAACAGCGACAGCCCTTCTCGAGCCATGTAGTCGCCCATaGTGCCCCCGCCGCCAGCGC +
Preference number: 4 (lower is better)
Translates to: SGLRTPHSETRTATALLEPCSRP*CPRRQR
Trigger: GCGCTGGCGGCGGGGGCAGCATGGGCGACTACATGG...CTCGAGAAGGGCTGTCGCTGTTCTTGTTTCTGAGTGAGGAGTACGCAGGCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR GCA 90 bp AGGATCTCCGGATGGGCGCACCTGCTGCTCAGGGCAGGGTTGCTGAGCAAGACCGTGGGAGTTGCACCATaGCGTGAAGGTCTTGCGCTG +
Preference number: 4 (lower is better)
Translates to: RISGWAHLLLRAGLLSKTVGVAP*REGLAL
Trigger: CAGCGCAAGACCTTCACGGCATGGTGCAACTCCCAC...GGTCTTGCTCAGCAACCCTGCCCTGAGCAGCAGGTGCGCCCATCCGGAGATCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR GCA 90 bp CCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGAATCGGCTATATCAGCTCTGGTCTGTaGCGGTGGATCAGGGCATTG +
Preference number: 4 (lower is better)
Translates to: PTQTRRSISKGPGQRIGYISSGL*RWIRAL
Trigger: CAATGCCCTGATCCACCGGCACAGACCAGAGCTGAT...ATAGCCGATTCTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR GCA 90 bp AGACCCACGCCCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGTCCTCCAGCTTCTGCTaGATCTCCTGGATAGTCTTT +
Preference number: 4 (lower is better)
Translates to: RPTPDADPEEHQQGARAESSSFC*ISWIVF
Trigger: AAAGACTATCCAGGAGATGCAGCAGAAGCTGGAGGA...CTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGGCGTGGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR GCA 90 bp CCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGAATCGGCTATGCCTGCTCCAAGTGCTaGCAGCCATTGTTGATGTCC +
Preference number: 4 (lower is better)
Translates to: PTQTRRSISKGPGQRIGYACSKC*QPLLMS
Trigger: GGACATCAACAATGGCTGGCAGCACTTGGAGCAGGC...ATAGCCGATTCTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR GCA 90 bp CCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGAATCGGCTATCGTTTTGGCACCAGCTaGTGCACCTTCTCCCACTTG +
Preference number: 4 (lower is better)
Translates to: PTQTRRSISKGPGQRIGYRFGTS*CTFSHL
Trigger: CAAGTGGGAGAAGGTGCAGCAGCTGGTGCCAAAACG...ATAGCCGATTCTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR GCA 90 bp GCCGCTACCGGGATAGCCGTCTGCGTGTGGACTTCGAGCGGTTCGTGTCCTGTGCTTGCCTGGCATGGGTaGCACTCTCTCTGGCATCCA +
Preference number: 4 (lower is better)
Translates to: AATGIAVCVWTSSGSCPVLAWHG*HSLWHP
Trigger: TGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAG...CACAGGACACGAACCGCTCGAAGTCCACACGCAGACGGCTATCCCGGTAGCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR GCA 90 bp GGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCCCTTGCCTGGCATGGGTaGCACTCTCTCTGGCATCCA +
Preference number: 4 (lower is better)
Translates to: GMGATLSGIHLSGASLWPLAWHG*HSLWHP
Trigger: TGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAG...GGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR GCA 90 bp AGGATCTCCGGATGGGCGCACCTGCTGCTCAGGGCAGGGTTGCTGAGCAAGACCCTTGCCTGGCATGGGTaGCACTCTCTCTGGCATCCA +
Preference number: 4 (lower is better)
Translates to: RISGWAHLLLRAGLLSKTLAWHG*HSLWHP
Trigger: TGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAG...GGTCTTGCTCAGCAACCCTGCCCTGAGCAGCAGGTGCGCCCATCCGGAGATCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR GCA 90 bp CCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGGGTGAGGGGGTCATCTaGCTGACCCACAGACAGGTG +
Preference number: 4 (lower is better)
Translates to: PGMGATLSGIHLSGASLWGEGVI*LTHRQV
Trigger: CACCTGTCTGTGGGTCAGGCAGATGACCCCCTCACC...CCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR GCA 90 bp CCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGAATCGGCTATGTGGCCCACCTCACCTaGATCTTCTGTGAGTACCAC +
Preference number: 4 (lower is better)
Translates to: PTQTRRSISKGPGQRIGYVAHLT*IFCEYH
Trigger: GTGGTACTCACAGAAGATGCAGGTGAGGTGGGCCAC...ATAGCCGATTCTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR GCA 90 bp GATGGAGGTGGCCACCTTCTCCTAGGATCTCCGGATGGGCGCACCTGCTGCTCAGGGGTGGGGATGCAATaGCAAGGTGGGTTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: DGGGHLLLGSPDGRTCCSGVGMQ*QGGFPV
Trigger: CACAGGGAACCCACCTTGGCATTGCATCCCCACCCC...TGAGCAGCAGGTGCGCCCATCCGGAGATCCTAGGAGAAGGTGGCCACCTCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp CCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGGAAGGAGCCCTTCCTTaGCCGAGGTCTCTTCCACGG +
Preference number: 4 (lower is better)
Translates to: PGMGATLSGIHLSGASLWEGALP*PRSLPR
Trigger: CCGTGGAAGAGACCTCGGCCAAGGAAGGGCTCCTTC...CCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CCA 90 bp GGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCCACTCCAGGAGGTCGCTaGCCAGCTTCTCGTAGTCCT +
Preference number: 4 (lower is better)
Translates to: GMGATLSGIHLSGASLWPTPGGR*PASRSP
Trigger: AGGACTACGAGAAGCTGGCCAGCGACCTCCTGGAGT...GGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CCA 90 bp CCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGAATCGGCTATTCCTGGATAGTCTTTTaGGGCACACGGTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PTQTRRSISKGPGQRIGYSWIVF*GTRSSS
Trigger: GCTGGAGGACCGTGTGCCCCAAAAGACTATCCAGGA...ATAGCCGATTCTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CCA 90 bp ATTGAAGGGATCAGCCTGTACTCACCCTGCCGGGATGGGGCAGAGTTGGGGTGTAAGGGGTACGGGGACTaGTGGGCACTCACCCTGCCC +
Preference number: 4 (lower is better)
Translates to: IEGISLYSPCRDGAELGCKGYGD*WALTLP
Trigger: GGGCAGGGTGAGTGCCCACCAGTCCCCGTACCCCTT...ACACCCCAACTCTGCCCCATCCCGGCAGGGTGAGTACAGGCTGATCCCTTCAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp GCCGCTACCGGGATAGCCGTCTGCGTGTGGACTTCGAGCGGTTCGTGTCCTGTGGATGCAATGCCAAGGTaGGTTCCCTGTGGGCCACTG +
Preference number: 4 (lower is better)
Translates to: AATGIAVCVWTSSGSCPVDAMPR*VPCGPL
Trigger: CAGTGGCCCACAGGGAACCCACCTTGGCATTGCATC...CACAGGACACGAACCGCTCGAAGTCCACACGCAGACGGCTATCCCGGTAGCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp GGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCCGATGCAATGCCAAGGTaGGTTCCCTGTGGGCCACTG +
Preference number: 4 (lower is better)
Translates to: GMGATLSGIHLSGASLWPDAMPR*VPCGPL
Trigger: CAGTGGCCCACAGGGAACCCACCTTGGCATTGCATC...GGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp GATGGAGGTGGCCACCTTCTCCTAGGATCTCCGGATGGGCGCACCTGCTGCTCATCCTCCCTGAGGAGGTaGGGTGGGGATGCAATGCCA +
Preference number: 4 (lower is better)
Translates to: DGGGHLLLGSPDGRTCCSSSLRR*GGDAMP
Trigger: TGGCATTGCATCCCCACCCCACCTCCTCAGGGAGGA...TGAGCAGCAGGTGCGCCCATCCGGAGATCCTAGGAGAAGGTGGCCACCTCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR TCA 90 bp CCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGAATCGGCTATCATTGTTCAGGTTGGTaGCAGGGTCGTCCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: PTQTRRSISKGPGQRIGYHCSGW*QGRPSS
Trigger: TGAGGAAGGACGACCCTGTCACCAACCTGAACAATG...ATAGCCGATTCTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR TCA 90 bp ATTGAAGGGATCAGCCTGTACTCACCCTGCCGGGATGGGGCAGAGTTGGGGTGTCCCAGCGCCCCGCCATaGTCCTTGTCGAAGTGGTTG +
Preference number: 4 (lower is better)
Translates to: IEGISLYSPCRDGAELGCPSAPP*SLSKWL
Trigger: CAACCACTTCGACAAGGATCATGGCGGGGCGCTGGG...ACACCCCAACTCTGCCCCATCCCGGCAGGGTGAGTACAGGCTGATCCCTTCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252699.7
ENST00000634960.2
CDS-3UTR TCA 90 bp TCTGGCCTGCGTACTCCTCACTCAGAAACAAGAACAGCGACAGCCCTTCTCGAGCTGCTCACGGCCGGGTaGCCACTCTGGCCTGCGTAC +
Preference number: 4 (lower is better)
Translates to: SGLRTPHSETRTATALLELLTAG*PLWPAY
Trigger: GTACGCAGGCCAGAGTGGTCACCCGGCCGTGAGCAG...CTCGAGAAGGGCTGTCGCTGTTCTTGTTTCTGAGTGAGGAGTACGCAGGCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR GCA 90 bp CCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGAATCGGCTATGTCCACAATCTCTTCTaGCCCGATGGAGACCAGCTT +
Preference number: 4 (lower is better)
Translates to: PTQTRRSISKGPGQRIGYVHNLF*PDGDQL
Trigger: AAGCTGGTCTCCATCGGGGCAGAAGAGATTGTGGAC...ATAGCCGATTCTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR GCA 90 bp GGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCCATCAGCTCTGGTCTGTaGCGGTGGATCAGGGCATTG +
Preference number: 4 (lower is better)
Translates to: GMGATLSGIHLSGASLWPISSGL*RWIRAL
Trigger: CAATGCCCTGATCCACCGGCACAGACCAGAGCTGAT...GGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR GCA 90 bp GGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCCGCCTGCTCCAAGTGCTaGCAGCCATTGTTGATGTCC +
Preference number: 4 (lower is better)
Translates to: GMGATLSGIHLSGASLWPACSKC*QPLLMS
Trigger: GGACATCAACAATGGCTGGCAGCACTTGGAGCAGGC...GGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR GCA 90 bp CCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGAATCGGCTATGTGACCACTCTGGCCTaGGTACTCCTCACTCAGAAA +
Preference number: 4 (lower is better)
Translates to: PTQTRRSISKGPGQRIGYVTTLA*VLLTQK
Trigger: TTTCTGAGTGAGGAGTACGCAGGCCAGAGTGGTCAC...ATAGCCGATTCTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR GCA 90 bp ACTGCTCACGGCCGGGTGACCACTCTGGCCTGCGTACTCCTCACTCAGAAACAAGCTCAGGCTCTGTCCTaGGAGCTCCCTGCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: TAHGRVTTLACVLLTQKQAQALS*ELPASS
Trigger: GCTTGAGGCAGGGAGCTCGCAGGACAGAGCCTGAGC...TTGTTTCTGAGTGAGGAGTACGCAGGCCAGAGTGGTCACCCGGCCGTGAGCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp GCCGCTACCGGGATAGCCGTCTGCGTGTGGACTTCGAGCGGTTCGTGTCCTGTGTCCTGGATAGTCTTTTaGGGCACACGGTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: AATGIAVCVWTSSGSCPVSWIVF*GTRSSS
Trigger: GCTGGAGGACCGTGTGCCCCAAAAGACTATCCAGGA...CACAGGACACGAACCGCTCGAAGTCCACACGCAGACGGCTATCCCGGTAGCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CCA 90 bp ACTGCTCACGGCCGGGTGACCACTCTGGCCTGCGTACTCCTCACTCAGAAACAAGGGTGCCACTCTCTCTaGCATCCACCTGTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: TAHGRVTTLACVLLTQKQGCHSL*HPPVWG
Trigger: GCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCC...TTGTTTCTGAGTGAGGAGTACGCAGGCCAGAGTGGTCACCCGGCCGTGAGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp CCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGAATCGGCTATCTCTTCCTTAGTGGATaGAGGTGGCCACCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: PTQTRRSISKGPGQRIGYLFLSG*RWPPSP
Trigger: AGGAGAAGGTGGCCACCTCCATCCACTAAGGAAGAG...ATAGCCGATTCTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp ACTGCTCACGGCCGGGTGACCACTCTGGCCTGCGTACTCCTCACTCAGAAACAAACTGCAGCCAGCACCTaGATGGGGGTGAGGGGGTCA +
Preference number: 4 (lower is better)
Translates to: TAHGRVTTLACVLLTQKQTAAST*MGVRGS
Trigger: TGACCCCCTCACCCCCATCCAGGTGCTGGCTGCAGT...TTGTTTCTGAGTGAGGAGTACGCAGGCCAGAGTGGTCACCCGGCCGTGAGCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp GCCGCTACCGGGATAGCCGTCTGCGTGTGGACTTCGAGCGGTTCGTGTCCTGTGATAGCCGTCTGCGTGTaGACTTCGAGCGGTTCGTGT +
Preference number: 4 (lower is better)
Translates to: AATGIAVCVWTSSGSCPVIAVCV*TSSGSC
Trigger: ACACGAACCGCTCGAAGTCCACACGCAGACGGCTAT...CACAGGACACGAACCGCTCGAAGTCCACACGCAGACGGCTATCCCGGTAGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
3UTR CAA 72 bp ATCAGCCTGTACTCACCCTGCCGGGATGGGGCAGAGTaGGGGTGTGACACCCTGTGGCATTCATGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: ISLYSPCRDGAE*GCDTLWHSCPP
Trigger: GGGAGGACATGAATGCCACAGGGTGTCACACCCCAACTCTGCCCCATCCCGGCAGGGTGAGTACAGGCTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR TCA 90 bp AGGATCTCCGGATGGGCGCACCTGCTGCTCAGGGCAGGGTTGCTGAGCAAGACCCATTGTTCAGGTTGGTaGCAGGGTCGTCCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: RISGWAHLLLRAGLLSKTHCSGW*QGRPSS
Trigger: TGAGGAAGGACGACCCTGTCACCAACCTGAACAATG...GGTCTTGCTCAGCAACCCTGCCCTGAGCAGCAGGTGCGCCCATCCGGAGATCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR GCA 90 bp CCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGATCAGCTCTGGTCTGTaGCGGTGGATCAGGGCATTG +
Preference number: 4 (lower is better)
Translates to: PGMGATLSGIHLSGASLWISSGL*RWIRAL
Trigger: CAATGCCCTGATCCACCGGCACAGACCAGAGCTGAT...CCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR GCA 90 bp GGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCCGCAGTTTCAGCCTTCTaGGCTCCTGAAAAGGCATGG +
Preference number: 4 (lower is better)
Translates to: GMGATLSGIHLSGASLWPAVSAF*APEKAW
Trigger: CCATGCCTTTTCAGGAGCGCAGAAGGCTGAAACTGC...GGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252699.7
ENST00000634960.2
CDS-3UTR GCA 90 bp GATGGAGGTGGCCACCTTCTCCTAGGATCTCCGGATGGGCGCACCTGCTGCTCAGCCTGCTCCAAGTGCTaGCAGCCATTGTTGATGTCC +
Preference number: 4 (lower is better)
Translates to: DGGGHLLLGSPDGRTCCSACSKC*QPLLMS
Trigger: GGACATCAACAATGGCTGGCAGCACTTGGAGCAGGC...TGAGCAGCAGGTGCGCCCATCCGGAGATCCTAGGAGAAGGTGGCCACCTCCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR GCA 90 bp TCTGGCCTGCGTACTCCTCACTCAGAAACAAGAACAGCGACAGCCCTTCTCGAGGTCTCTGGCCCTCACTaGTCACGGCCGGGTGACCAC +
Preference number: 4 (lower is better)
Translates to: SGLRTPHSETRTATALLEVSGPH*SRPGDH
Trigger: GTGGTCACCCGGCCGTGAGCAGTGAGGGCCAGAGAC...CTCGAGAAGGGCTGTCGCTGTTCTTGTTTCTGAGTGAGGAGTACGCAGGCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR GCA 90 bp TCTGGCCTGCGTACTCCTCACTCAGAAACAAGAACAGCGACAGCCCTTCTCGAGCACCCTGCCCCTCTCTaGACAGGCCACTGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: SGLRTPHSETRTATALLEHPAPL*TGHCSQ
Trigger: CTGGCTGCAGTGGCCTGTGCAGAGAGGGGCAGGGTG...CTCGAGAAGGGCTGTCGCTGTTCTTGTTTCTGAGTGAGGAGTACGCAGGCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR GCA 90 bp CTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCCTCACTGCTCACGGCCGGGTGCCCACAATATCCTCTaGATCCAGCATCTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: LASTCLGLVSGPHCSRPGAHNIL*IQHLGD
Trigger: ATCCCCAAGATGCTGGATGCAGAGGATATTGTGGGC...ACCCGGCCGTGAGCAGTGAGGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440400.2
CDS-3UTR GCA 90 bp CTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCCTCACTGCTCACGGCCGGGTAGTCATCGGAGTCCATaGTGCCTGTCTGCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: LASTCLGLVSGPHCSRPGSHRSP*CLSASC
Trigger: ACAAGAAGCAGACAGGCAGCATGGACTCCGATGACT...ACCCGGCCGTGAGCAGTGAGGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440400.2
ENST00000635719.1
CDS-3UTR GCA 90 bp CCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGAATCGGCTATAGTCATCGGAGTCCATaGTGCCTGTCTGCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: PTQTRRSISKGPGQRIGYSHRSP*CLSASC
Trigger: ACAAGAAGCAGACAGGCAGCATGGACTCCGATGACT...ATAGCCGATTCTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440400.2
ENST00000635719.1
CDS-3UTR CCA 90 bp ATTGAAGGGATCAGCCTGTACTCACCCTGCCGGGATGGGGCAGAGTTGGGGTGTCCCGGTGCTTCAGCATaGCTTCCTTCCCGTCAGTCC +
Preference number: 4 (lower is better)
Translates to: IEGISLYSPCRDGAELGCPGASA*LPSRQS
Trigger: GGACTGACGGGAAGGAAGCCATGCTGAAGCACCGGG...ACACCCCAACTCTGCCCCATCCCGGCAGGGTGAGTACAGGCTGATCCCTTCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CCA 90 bp ATTGAAGGGATCAGCCTGTACTCACCCTGCCGGGATGGGGCAGAGTTGGGGTGTAGGCCTTGCCTGGCATaGGTGCCACTCTCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: IEGISLYSPCRDGAELGCRPCLA*VPLSLA
Trigger: TGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCCT...ACACCCCAACTCTGCCCCATCCCGGCAGGGTGAGTACAGGCTGATCCCTTCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp ATTGAAGGGATCAGCCTGTACTCACCCTGCCGGGATGGGGCAGAGTTGGGGTGTTCCCTAGGCCTTGCCTaGCATGGGTGCCACTCTCTC +
Preference number: 4 (lower is better)
Translates to: IEGISLYSPCRDGAELGCSLGLA*HGCHSL
Trigger: GAGAGAGTGGCACCCATGCCAGGCAAGGCCTAGGGA...ACACCCCAACTCTGCCCCATCCCGGCAGGGTGAGTACAGGCTGATCCCTTCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp GCCGCTACCGGGATAGCCGTCTGCGTGTGGACTTCGAGCGGTTCGTGTCCTGTGCTCTTCCTTAGTGGATaGAGGTGGCCACCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: AATGIAVCVWTSSGSCPVLFLSG*RWPPSP
Trigger: AGGAGAAGGTGGCCACCTCCATCCACTAAGGAAGAG...CACAGGACACGAACCGCTCGAAGTCCACACGCAGACGGCTATCCCGGTAGCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp TCTGGCCTGCGTACTCCTCACTCAGAAACAAGAACAGCGACAGCCCTTCTCGAGAAGGGGTACGGGGACTaGTGGGCACTCACCCTGCCC +
Preference number: 4 (lower is better)
Translates to: SGLRTPHSETRTATALLEKGYGD*WALTLP
Trigger: GGGCAGGGTGAGTGCCCACCAGTCCCCGTACCCCTT...CTCGAGAAGGGCTGTCGCTGTTCTTGTTTCTGAGTGAGGAGTACGCAGGCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp CCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGATAGCCGTCTGCGTGTaGACTTCGAGCGGTTCGTGT +
Preference number: 4 (lower is better)
Translates to: PGMGATLSGIHLSGASLWIAVCV*TSSGSC
Trigger: ACACGAACCGCTCGAAGTCCACACGCAGACGGCTAT...CCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR TCA 90 bp GGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCCGGAAGTTCTGCACATTaGCGTTCTTATACGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GMGATLSGIHLSGASLWPGSSAH*RSYTGL
Trigger: CAGCCCCGTATAAGAACGTCAATGTGCAGAACTTCC...GGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR TCA 90 bp ACTGCTCACGGCCGGGTGACCACTCTGGCCTGCGTACTCCTCACTCAGAAACAATGCTGCCCGACAGCTTaGTGTGGTTGCTCTCAGCGA +
Preference number: 4 (lower is better)
Translates to: TAHGRVTTLACVLLTQKQCCPTA*CGCSQR
Trigger: TCGCTGAGAGCAACCACATCAAGCTGTCGGGCAGCA...TTGTTTCTGAGTGAGGAGTACGCAGGCCAGAGTGGTCACCCGGCCGTGAGCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR GCA 90 bp ATTGAAGGGATCAGCCTGTACTCACCCTGCCGGGATGGGGCAGAGTTGGGGTGTTTGGCGTATTCCAGGTaGAGCTGGTCGATGGCCTCC +
Preference number: 4 (lower is better)
Translates to: IEGISLYSPCRDGAELGCLAYSR*SWSMAS
Trigger: GGAGGCCATCGACCAGCTGCACCTGGAATACGCCAA...ACACCCCAACTCTGCCCCATCCCGGCAGGGTGAGTACAGGCTGATCCCTTCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR GCA 90 bp CCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGAATCGGCTATAGAAATATCCTCCAGTaGCCACTGGCAAGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: PTQTRRSISKGPGQRIGYRNILQ*PLARRK
Trigger: CTTTCTCCTTGCCAGTGGGCACTGGAGGATATTTCT...ATAGCCGATTCTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp TCTGGCCTGCGTACTCCTCACTCAGAAACAAGAACAGCGACAGCCCTTCTCGAGTCTGGGGCTAGTCTCTaGCCCTCACTGCTCACGGCC +
Preference number: 4 (lower is better)
Translates to: SGLRTPHSETRTATALLESGASL*PSLLTA
Trigger: GGCCGTGAGCAGTGAGGGCCAGAGACTAGCCCCAGA...CTCGAGAAGGGCTGTCGCTGTTCTTGTTTCTGAGTGAGGAGTACGCAGGCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp TCTGGCCTGCGTACTCCTCACTCAGAAACAAGAACAGCGACAGCCCTTCTCGAGGGGTGCCACTCTCTCTaGCATCCACCTGTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: SGLRTPHSETRTATALLEGCHSL*HPPVWG
Trigger: GCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCC...CTCGAGAAGGGCTGTCGCTGTTCTTGTTTCTGAGTGAGGAGTACGCAGGCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp TCTGGCCTGCGTACTCCTCACTCAGAAACAAGAACAGCGACAGCCCTTCTCGAGCCTAGGATCTCCGGATaGGCGCACCTGCTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: SGLRTPHSETRTATALLEPRISG*AHLLLR
Trigger: CCTGAGCAGCAGGTGCGCCCATCCGGAGATCCTAGG...CTCGAGAAGGGCTGTCGCTGTTCTTGTTTCTGAGTGAGGAGTACGCAGGCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp CCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCTTAGTGGATGGAGGTaGCCACCTTCTCCTAGGATC +
Preference number: 4 (lower is better)
Translates to: PGMGATLSGIHLSGASLWLSGWR*PPSPRI
Trigger: GATCCTAGGAGAAGGTGGCCACCTCCATCCACTAAG...CCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp GATGGAGGTGGCCACCTTCTCCTAGGATCTCCGGATGGGCGCACCTGCTGCTCACTTAGTGGATGGAGGTaGCCACCTTCTCCTAGGATC +
Preference number: 4 (lower is better)
Translates to: DGGGHLLLGSPDGRTCCSLSGWR*PPSPRI
Trigger: GATCCTAGGAGAAGGTGGCCACCTCCATCCACTAAG...TGAGCAGCAGGTGCGCCCATCCGGAGATCCTAGGAGAAGGTGGCCACCTCCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp ACTGCTCACGGCCGGGTGACCACTCTGGCCTGCGTACTCCTCACTCAGAAACAATCCTCCAGTGCCCACTaGCAAGGAGAAAGCCCCACA +
Preference number: 4 (lower is better)
Translates to: TAHGRVTTLACVLLTQKQSSSAH*QGESPT
Trigger: TGTGGGGCTTTCTCCTTGCCAGTGGGCACTGGAGGA...TTGTTTCTGAGTGAGGAGTACGCAGGCCAGAGTGGTCACCCGGCCGTGAGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR TCA 90 bp CCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGGGAAGTTCTGCACATTaGCGTTCTTATACGGGGCTG +
Preference number: 4 (lower is better)
Translates to: PGMGATLSGIHLSGASLWGSSAH*RSYTGL
Trigger: CAGCCCCGTATAAGAACGTCAATGTGCAGAACTTCC...CCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR TCA 90 bp GATGGAGGTGGCCACCTTCTCCTAGGATCTCCGGATGGGCGCACCTGCTGCTCACGAGCTAGTCCACGTTaGCAGCTTAAGACAGTGCTA +
Preference number: 4 (lower is better)
Translates to: DGGGHLLLGSPDGRTCCSRASPR*QLKTVL
Trigger: TAGCACTGTCTTAAGCTGTCAACGTGGACTAGCTCG...TGAGCAGCAGGTGCGCCCATCCGGAGATCCTAGGAGAAGGTGGCCACCTCCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR TCA 90 bp CCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCGAGCTAGTCCACGTTaGCAGCTTAAGACAGTGCTA +
Preference number: 4 (lower is better)
Translates to: PGMGATLSGIHLSGASLWRASPR*QLKTVL
Trigger: TAGCACTGTCTTAAGCTGTCAACGTGGACTAGCTCG...CCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR TCA 90 bp ACTGCTCACGGCCGGGTGACCACTCTGGCCTGCGTACTCCTCACTCAGAAACAACCCTTCTCGAGCAGATaGCACGAGCTAGTCCACGTT +
Preference number: 4 (lower is better)
Translates to: TAHGRVTTLACVLLTQKQPFSSR*HELVHV
Trigger: AACGTGGACTAGCTCGTGTCATCTGCTCGAGAAGGG...TTGTTTCTGAGTGAGGAGTACGCAGGCCAGAGTGGTCACCCGGCCGTGAGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR TCA 90 bp AAATATCCTCCAGTGCCCACTGGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTCTGCTCACGGCCGGGTaGCCACTCTGGCCTGCGTAC +
Preference number: 4 (lower is better)
Translates to: KYPPVPTGKEKAPQDLRSLLTAG*PLWPAY
Trigger: GTACGCAGGCCAGAGTGGTCACCCGGCCGTGAGCAG...ACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCCAGTGGGCACTGGAGGATATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR GCA 90 bp AAATATCCTCCAGTGCCCACTGGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTCGCCATTGCCCGCGCTaGTGGGGCCGTACTGGTACG +
Preference number: 4 (lower is better)
Translates to: KYPPVPTGKEKAPQDLRSRHCPR*WGRTGT
Trigger: CGTACCAGTACGGCCCCAGCAGCGCGGGCAATGGCG...ACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCCAGTGGGCACTGGAGGATATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR GCA 90 bp GGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTACCCACACATCGAGTTGTAGTCGCCCATGCTaGCCCCGCCGCCAGCGCCAT +
Preference number: 4 (lower is better)
Translates to: GKEKAPQDLRSNSTHTSSCSRPC*PRRQRH
Trigger: ATGGCGCTGGCGGCGGGGGCAGCATGGGCGACTACA...ACTCGATGTGTGGGTACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR GCA 90 bp CCTCCAGTGCCCACTGGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTGTGAAGGTCTTGCGCTaGTGCTTCTCCCAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: PPVPTGKEKAPQDLRSNSVKVLR*CFSQAG
Trigger: CCCGGCCTGGGAGAAGCAGCAGCGCAAGACCTTCAC...ACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCCAGTGGGCACTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR GCA 90 bp GGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCCTCCTCCAGCTTCTGCTaGATCTCCTGGATAGTCTTT +
Preference number: 4 (lower is better)
Translates to: GMGATLSGIHLSGASLWPSSSFC*ISWIVF
Trigger: AAAGACTATCCAGGAGATGCAGCAGAAGCTGGAGGA...GGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR GCA 90 bp ACTGCTCACGGCCGGGTGACCACTCTGGCCTGCGTACTCCTCACTCAGAAACAACGTTTTGGCACCAGCTaGTGCACCTTCTCCCACTTG +
Preference number: 4 (lower is better)
Translates to: TAHGRVTTLACVLLTQKQRFGTS*CTFSHL
Trigger: CAAGTGGGAGAAGGTGCAGCAGCTGGTGCCAAAACG...TTGTTTCTGAGTGAGGAGTACGCAGGCCAGAGTGGTCACCCGGCCGTGAGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR GCA 90 bp TCTGGCCTGCGTACTCCTCACTCAGAAACAAGAACAGCGACAGCCCTTCTCGAGGTCCTGCGAGCTCCCTaGCTCAAGCCACTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: SGLRTPHSETRTATALLEVLRAP*LKPLSS
Trigger: GGAAGACAGTGGCTTGAGGCAGGGAGCTCGCAGGAC...CTCGAGAAGGGCTGTCGCTGTTCTTGTTTCTGAGTGAGGAGTACGCAGGCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR GCA 90 bp CCTCCAGTGCCCACTGGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTGCTCAGGCTCTGTCCTaGGAGCTCCCTGCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: PPVPTGKEKAPQDLRSNSAQALS*ELPASS
Trigger: GCTTGAGGCAGGGAGCTCGCAGGACAGAGCCTGAGC...ACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCCAGTGGGCACTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR GCA 90 bp ACTGCTCACGGCCGGGTGACCACTCTGGCCTGCGTACTCCTCACTCAGAAACAAGTGGCCCACCTCACCTaGATCTTCTGTGAGTACCAC +
Preference number: 4 (lower is better)
Translates to: TAHGRVTTLACVLLTQKQVAHLT*IFCEYH
Trigger: GTGGTACTCACAGAAGATGCAGGTGAGGTGGGCCAC...TTGTTTCTGAGTGAGGAGTACGCAGGCCAGAGTGGTCACCCGGCCGTGAGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR GCA 90 bp AGGATCTCCGGATGGGCGCACCTGCTGCTCAGGGCAGGGTTGCTGAGCAAGACCAGAAATATCCTCCAGTaGCCACTGGCAAGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: RISGWAHLLLRAGLLSKTRNILQ*PLARRK
Trigger: CTTTCTCCTTGCCAGTGGGCACTGGAGGATATTTCT...GGTCTTGCTCAGCAACCCTGCCCTGAGCAGCAGGTGCGCCCATCCGGAGATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp AGGATCTCCGGATGGGCGCACCTGCTGCTCAGGGCAGGGTTGCTGAGCAAGACCTCCTTCCAGCTGATGTaGAAGTTCTGCACATTGACG +
Preference number: 4 (lower is better)
Translates to: RISGWAHLLLRAGLLSKTSFQLM*KFCTLT
Trigger: CGTCAATGTGCAGAACTTCCACATCAGCTGGAAGGA...GGTCTTGCTCAGCAACCCTGCCCTGAGCAGCAGGTGCGCCCATCCGGAGATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CCA 90 bp ACTGCTCACGGCCGGGTGACCACTCTGGCCTGCGTACTCCTCACTCAGAAACAATCCTGGATAGTCTTTTaGGGCACACGGTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: TAHGRVTTLACVLLTQKQSWIVF*GTRSSS
Trigger: GCTGGAGGACCGTGTGCCCCAAAAGACTATCCAGGA...TTGTTTCTGAGTGAGGAGTACGCAGGCCAGAGTGGTCACCCGGCCGTGAGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CCA 90 bp GGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTACCCACACATCGAGTGGCCGTCGGGGGTGTTaGGTCAGGTCTCTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: GKEKAPQDLRSNSTHTSSGRRGC*VRSLGP
Trigger: AGGCCCCAGAGACCTGACCCAACACCCCCGACGGCC...ACTCGATGTGTGGGTACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp AAATATCCTCCAGTGCCCACTGGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTCAAGGCCGGGGCTGGTaGGATGGGGTGCGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: KYPPVPTGKEKAPQDLRSQGRGW*DGVRFR
Trigger: CCTGAACCGCACCCCATCCCACCAGCCCCGGCCTTG...ACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCCAGTGGGCACTGGAGGATATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp CCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCTGTCCCCAGAGGGTaGTTTATCCAGAAACCAAGA +
Preference number: 4 (lower is better)
Translates to: PGMGATLSGIHLSGASLWPVPRG*FIQKPR
Trigger: TCTTGGTTTCTGGATAAACCACCCTCTGGGGACAGG...CCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp GGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTACCCACACATCGAGTGGGTACGGGGACTGGTaGGCACTCACCCTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: GKEKAPQDLRSNSTHTSSGYGDW*ALTLPL
Trigger: GAGGGGCAGGGTGAGTGCCCACCAGTCCCCGTACCC...ACTCGATGTGTGGGTACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp GAGAAAGCCCCACAGGATTTAAGGAGTAACAGTACCCACACATCGAGTCACGTGGGGTACGGGGACTGGTaGGCACTCACCCTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: EKAPQDLRSNSTHTSSHVGYGDW*ALTLPL
Trigger: GAGGGGCAGGGTGAGTGCCCACCAGTCCCCGTACCC...CACGTGACTCGATGTGTGGGTACTGTTACTCCTTAAATCCTGTGGGGCTTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp AAATATCCTCCAGTGCCCACTGGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTGGGTACGGGGACTGGTaGGCACTCACCCTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: KYPPVPTGKEKAPQDLRSGYGDW*ALTLPL
Trigger: GAGGGGCAGGGTGAGTGCCCACCAGTCCCCGTACCC...ACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCCAGTGGGCACTGGAGGATATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR TCA 90 bp TCTGGCCTGCGTACTCCTCACTCAGAAACAAGAACAGCGACAGCCCTTCTCGAGCACCTGCATCTTCTGTaGGTACCACCCCGGCATGGT +
Preference number: 4 (lower is better)
Translates to: SGLRTPHSETRTATALLEHLHLL*VPPRHG
Trigger: ACCATGCCGGGGTGGTACTCACAGAAGATGCAGGTG...CTCGAGAAGGGCTGTCGCTGTTCTTGTTTCTGAGTGAGGAGTACGCAGGCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR GCA 90 bp CCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGTCCTCCAGCTTCTGCTaGATCTCCTGGATAGTCTTT +
Preference number: 4 (lower is better)
Translates to: PGMGATLSGIHLSGASLWSSSFC*ISWIVF
Trigger: AAAGACTATCCAGGAGATGCAGCAGAAGCTGGAGGA...CCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR GCA 90 bp ACTGCTCACGGCCGGGTGACCACTCTGGCCTGCGTACTCCTCACTCAGAAACAAGTGACCACTCTGGCCTaGGTACTCCTCACTCAGAAA +
Preference number: 4 (lower is better)
Translates to: TAHGRVTTLACVLLTQKQVTTLA*VLLTQK
Trigger: TTTCTGAGTGAGGAGTACGCAGGCCAGAGTGGTCAC...TTGTTTCTGAGTGAGGAGTACGCAGGCCAGAGTGGTCACCCGGCCGTGAGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR GCA 90 bp GAGAAAGCCCCACAGGATTTAAGGAGTAACAGTACCCACACATCGAGTCACGTGGTCTCTGGCCCTCACTaGTCACGGCCGGGTGACCAC +
Preference number: 4 (lower is better)
Translates to: EKAPQDLRSNSTHTSSHVVSGPH*SRPGDH
Trigger: GTGGTCACCCGGCCGTGAGCAGTGAGGGCCAGAGAC...CACGTGACTCGATGTGTGGGTACTGTTACTCCTTAAATCCTGTGGGGCTTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR GCA 90 bp CCTCCAGTGCCCACTGGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTGTCCTGCGAGCTCCCTaGCTCAAGCCACTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: PPVPTGKEKAPQDLRSNSVLRAP*LKPLSS
Trigger: GGAAGACAGTGGCTTGAGGCAGGGAGCTCGCAGGAC...ACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCCAGTGGGCACTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR GCA 90 bp GGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTACCCACACATCGAGTCACCCTGCCCCTCTCTaGACAGGCCACTGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: GKEKAPQDLRSNSTHTSSHPAPL*TGHCSQ
Trigger: CTGGCTGCAGTGGCCTGTGCAGAGAGGGGCAGGGTG...ACTCGATGTGTGGGTACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR GCA 90 bp GGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTACCCACACATCGAGTGGTGGGCACTCACCCTaGCCCTCTCTGCACAGGCCA +
Preference number: 4 (lower is better)
Translates to: GKEKAPQDLRSNSTHTSSGGHSP*PSLHRP
Trigger: TGGCCTGTGCAGAGAGGGGCAGGGTGAGTGCCCACC...ACTCGATGTGTGGGTACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR GCA 90 bp ATTGAAGGGATCAGCCTGTACTCACCCTGCCGGGATGGGGCAGAGTTGGGGTGTCATCGGAGTCCATGCTaGCTGTCTGCTTCTTGTCGA +
Preference number: 4 (lower is better)
Translates to: IEGISLYSPCRDGAELGCHRSPC*LSASCR
Trigger: TCGACAAGAAGCAGACAGGCAGCATGGACTCCGATG...ACACCCCAACTCTGCCCCATCCCGGCAGGGTGAGTACAGGCTGATCCCTTCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440400.2
ENST00000635719.1
CDS-3UTR CCA 90 bp GGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTACCCACACATCGAGTCTGCTGGGGCCGTACTaGTACGACTGGTTCGCCGCG +
Preference number: 4 (lower is better)
Translates to: GKEKAPQDLRSNSTHTSSLLGPY*YDWFAA
Trigger: CGCGGCGAACCAGTCGTACCAGTACGGCCCCAGCAG...ACTCGATGTGTGGGTACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CCA 90 bp ATTGAAGGGATCAGCCTGTACTCACCCTGCCGGGATGGGGCAGAGTTGGGGTGTCCTTACAGATCCGGTTaGCGGCAGTTTCAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: IEGISLYSPCRDGAELGCPYRSG*RQFQPS
Trigger: AGAAGGCTGAAACTGCCGCCAACCGGATCTGTAAGG...ACACCCCAACTCTGCCCCATCCCGGCAGGGTGAGTACAGGCTGATCCCTTCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CCA 90 bp GAGAAAGCCCCACAGGATTTAAGGAGTAACAGTACCCACACATCGAGTCACGTGGCCCACCTCCACCTCTaGAGGGTCCCCAGAGACCCA +
Preference number: 4 (lower is better)
Translates to: EKAPQDLRSNSTHTSSHVAHLHL*RVPRDP
Trigger: TGGGTCTCTGGGGACCCTCCAGAGGTGGAGGTGGGC...CACGTGACTCGATGTGTGGGTACTGTTACTCCTTAAATCCTGTGGGGCTTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp ACTGCTCACGGCCGGGTGACCACTCTGGCCTGCGTACTCCTCACTCAGAAACAAGGCTCTCCTAGAAGGTaGAGGACAGACACAGGAGAA +
Preference number: 4 (lower is better)
Translates to: TAHGRVTTLACVLLTQKQGSPRR*RTDTGE
Trigger: TTCTCCTGTGTCTGTCCTCCACCTTCTAGGAGAGCC...TTGTTTCTGAGTGAGGAGTACGCAGGCCAGAGTGGTCACCCGGCCGTGAGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp CCTCCAGTGCCCACTGGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTAGGCCTTGCCTGGCATaGGTGCCACTCTCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: PPVPTGKEKAPQDLRSNSRPCLA*VPLSLA
Trigger: TGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCCT...ACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCCAGTGGGCACTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp CCTCCAGTGCCCACTGGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTCCTGAGGAGGTGGGGTaGGGATGCAATGCCAAGGTG +
Preference number: 4 (lower is better)
Translates to: PPVPTGKEKAPQDLRSNSPEEVG*GCNAKV
Trigger: CACCTTGGCATTGCATCCCCACCCCACCTCCTCAGG...ACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCCAGTGGGCACTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp ACTGCTCACGGCCGGGTGACCACTCTGGCCTGCGTACTCCTCACTCAGAAACAAGATGGCCTTCTCATCTaGCCTCAGAGTGCCCACAAT +
Preference number: 4 (lower is better)
Translates to: TAHGRVTTLACVLLTQKQDGLLI*PQSAHN
Trigger: ATTGTGGGCACTCTGAGGCCAGATGAGAAGGCCATC...TTGTTTCTGAGTGAGGAGTACGCAGGCCAGAGTGGTCACCCGGCCGTGAGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440400.2
CDS-3UTR GCA 90 bp CCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGACATTGTTGATTTTGTaGACTCTCATCTTCCCCCGC +
Preference number: 4 (lower is better)
Translates to: PGMGATLSGIHLSGASLWTLLIL*TLIFPR
Trigger: GCGGGGGAAGATGAGAGTGCACAAAATCAACAATGT...CCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR GCA 90 bp ATTGAAGGGATCAGCCTGTACTCACCCTGCCGGGATGGGGCAGAGTTGGGGTGTGGGTCATCTTTGCGTTaGCGTCCACAATCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: IEGISLYSPCRDGAELGCGSSLR*RPQSLL
Trigger: CAGAAGAGATTGTGGACGGCAACGCAAAGATGACCC...ACACCCCAACTCTGCCCCATCCCGGCAGGGTGAGTACAGGCTGATCCCTTCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR GCA 90 bp ACTGCTCACGGCCGGGTGACCACTCTGGCCTGCGTACTCCTCACTCAGAAACAAGTTCACGATGTCCTCTaGATCCAGCATCTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: TAHGRVTTLACVLLTQKQVHDVL*IQHLGD
Trigger: ATCCCCAAGATGCTGGATGCAGAGGACATCGTGAAC...TTGTTTCTGAGTGAGGAGTACGCAGGCCAGAGTGGTCACCCGGCCGTGAGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252699.7
ENST00000634960.2
CDS-3UTR GCA 90 bp AAATATCCTCCAGTGCCCACTGGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTCTCTGCACAGGCCACTaGAGCCAGCACCTGGATGGG +
Preference number: 4 (lower is better)
Translates to: KYPPVPTGKEKAPQDLRSLCTGH*SQHLDG
Trigger: CCCATCCAGGTGCTGGCTGCAGTGGCCTGTGCAGAG...ACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCCAGTGGGCACTGGAGGATATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp AAATATCCTCCAGTGCCCACTGGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTCATTGCCCGCGCTGCTaGGGCCGTACTGGTACGACT +
Preference number: 4 (lower is better)
Translates to: KYPPVPTGKEKAPQDLRSHCPRC*GRTGTT
Trigger: AGTCGTACCAGTACGGCCCCAGCAGCGCGGGCAATG...ACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCCAGTGGGCACTGGAGGATATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CCA 90 bp ACTGCTCACGGCCGGGTGACCACTCTGGCCTGCGTACTCCTCACTCAGAAACAACGCGGATGTGCTCCATaGTATAGTTGGTGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: TAHGRVTTLACVLLTQKQRGCAP*YSWCAC
Trigger: ACAAGCACACCAACTATACCATGGAGCACATCCGCG...TTGTTTCTGAGTGAGGAGTACGCAGGCCAGAGTGGTCACCCGGCCGTGAGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp ATTGAAGGGATCAGCCTGTACTCACCCTGCCGGGATGGGGCAGAGTTGGGGTGTCGCGGATGTGCTCCATaGTATAGTTGGTGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: IEGISLYSPCRDGAELGCRGCAP*YSWCAC
Trigger: ACAAGCACACCAACTATACCATGGAGCACATCCGCG...ACACCCCAACTCTGCCCCATCCCGGCAGGGTGAGTACAGGCTGATCCCTTCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp GGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTACCCACACATCGAGTACTGCAGCCAGCACCTaGATGGGGGTGAGGGGGTCA +
Preference number: 4 (lower is better)
Translates to: GKEKAPQDLRSNSTHTSSTAAST*MGVRGS
Trigger: TGACCCCCTCACCCCCATCCAGGTGCTGGCTGCAGT...ACTCGATGTGTGGGTACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp CCTCCAGTGCCCACTGGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTTCCTCCAGTGCCCACTaGCAAGGAGAAAGCCCCACA +
Preference number: 4 (lower is better)
Translates to: PPVPTGKEKAPQDLRSNSSSSAH*QGESPT
Trigger: TGTGGGGCTTTCTCCTTGCCAGTGGGCACTGGAGGA...ACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCCAGTGGGCACTGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR TCA 90 bp CCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGAATCGGCTATCTTTGTTCACATTGTTaGTTTTGTGCACTCTCATCT +
Preference number: 4 (lower is better)
Translates to: PTQTRRSISKGPGQRIGYLCSHC*FCALSS
Trigger: AGATGAGAGTGCACAAAATCAACAATGTGAACAAAG...ATAGCCGATTCTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR GCA 90 bp TCTGGCCTGCGTACTCCTCACTCAGAAACAAGAACAGCGACAGCCCTTCTCGAGGCAGTTTCAGCCTTCTaGGCTCCTGAAAAGGCATGG +
Preference number: 4 (lower is better)
Translates to: SGLRTPHSETRTATALLEAVSAF*APEKAW
Trigger: CCATGCCTTTTCAGGAGCGCAGAAGGCTGAAACTGC...CTCGAGAAGGGCTGTCGCTGTTCTTGTTTCTGAGTGAGGAGTACGCAGGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252699.7
ENST00000634960.2
CDS-3UTR GCA 90 bp CCTCCAGTGCCCACTGGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTCGTTTTGGCACCAGCTaGTGCACCTTCTCCCACTTG +
Preference number: 4 (lower is better)
Translates to: PPVPTGKEKAPQDLRSNSRFGTS*CTFSHL
Trigger: CAAGTGGGAGAAGGTGCAGCAGCTGGTGCCAAAACG...ACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCCAGTGGGCACTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp AAATATCCTCCAGTGCCCACTGGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTCCCGGTGCTTCAGCATaGCTTCCTTCCCGTCAGTCC +
Preference number: 4 (lower is better)
Translates to: KYPPVPTGKEKAPQDLRSPGASA*LPSRQS
Trigger: GGACTGACGGGAAGGAAGCCATGCTGAAGCACCGGG...ACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCCAGTGGGCACTGGAGGATATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CCA 90 bp GGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTACCCACACATCGAGTAGGCCTTGCCTGGCATaGGTGCCACTCTCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: GKEKAPQDLRSNSTHTSSRPCLA*VPLSLA
Trigger: TGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCCT...ACTCGATGTGTGGGTACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp GAGAAAGCCCCACAGGATTTAAGGAGTAACAGTACCCACACATCGAGTCACGTGTCCTCCCTGAGGAGGTaGGGTGGGGATGCAATGCCA +
Preference number: 4 (lower is better)
Translates to: EKAPQDLRSNSTHTSSHVSSLRR*GGDAMP
Trigger: TGGCATTGCATCCCCACCCCACCTCCTCAGGGAGGA...CACGTGACTCGATGTGTGGGTACTGTTACTCCTTAAATCCTGTGGGGCTTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR TCA 90 bp GAGAAAGCCCCACAGGATTTAAGGAGTAACAGTACCCACACATCGAGTCACGTGAGTTGCACCATGCCGTaGAGGTCTTGCGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: EKAPQDLRSNSTHTSSHVSCTMP*RSCAAA
Trigger: AGCAGCAGCGCAAGACCTTCACGGCATGGTGCAACT...CACGTGACTCGATGTGTGGGTACTGTTACTCCTTAAATCCTGTGGGGCTTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR TCA 90 bp AAATATCCTCCAGTGCCCACTGGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAGTTGCACCATGCCGTaGAGGTCTTGCGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: KYPPVPTGKEKAPQDLRSSCTMP*RSCAAA
Trigger: AGCAGCAGCGCAAGACCTTCACGGCATGGTGCAACT...ACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCCAGTGGGCACTGGAGGATATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR TCA 90 bp AAATATCCTCCAGTGCCCACTGGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTTGCTGCCCGACAGCTTaGTGTGGTTGCTCTCAGCGA +
Preference number: 4 (lower is better)
Translates to: KYPPVPTGKEKAPQDLRSCCPTA*CGCSQR
Trigger: TCGCTGAGAGCAACCACATCAAGCTGTCGGGCAGCA...ACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCCAGTGGGCACTGGAGGATATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR GCA 90 bp ATTGAAGGGATCAGCCTGTACTCACCCTGCCGGGATGGGGCAGAGTTGGGGTGTACATTGTTGATTTTGTaGACTCTCATCTTCCCCCGC +
Preference number: 4 (lower is better)
Translates to: IEGISLYSPCRDGAELGCTLLIL*TLIFPR
Trigger: GCGGGGGAAGATGAGAGTGCACAAAATCAACAATGT...ACACCCCAACTCTGCCCCATCCCGGCAGGGTGAGTACAGGCTGATCCCTTCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR GCA 90 bp TCTGGCCTGCGTACTCCTCACTCAGAAACAAGAACAGCGACAGCCCTTCTCGAGGGGTCATCTTTGCGTTaGCGTCCACAATCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: SGLRTPHSETRTATALLEGSSLR*RPQSLL
Trigger: CAGAAGAGATTGTGGACGGCAACGCAAAGATGACCC...CTCGAGAAGGGCTGTCGCTGTTCTTGTTTCTGAGTGAGGAGTACGCAGGCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR GCA 90 bp GGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTACCCACACATCGAGTTTGGCGTATTCCAGGTaGAGCTGGTCGATGGCCTCC +
Preference number: 4 (lower is better)
Translates to: GKEKAPQDLRSNSTHTSSLAYSR*SWSMAS
Trigger: GGAGGCCATCGACCAGCTGCACCTGGAATACGCCAA...ACTCGATGTGTGGGTACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CCA 90 bp CCTCCAGTGCCCACTGGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTCCTTACAGATCCGGTTaGCGGCAGTTTCAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: PPVPTGKEKAPQDLRSNSPYRSG*RQFQPS
Trigger: AGAAGGCTGAAACTGCCGCCAACCGGATCTGTAAGG...ACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCCAGTGGGCACTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CCA 90 bp GGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTACCCACACATCGAGTTCCTCCAGTGCCCACTaGCAAGGAGAAAGCCCCACA +
Preference number: 4 (lower is better)
Translates to: GKEKAPQDLRSNSTHTSSSSSAH*QGESPT
Trigger: TGTGGGGCTTTCTCCTTGCCAGTGGGCACTGGAGGA...ACTCGATGTGTGGGTACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR GCA 90 bp CCTCCAGTGCCCACTGGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTGGGTCATCTTTGCGTTaGCGTCCACAATCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: PPVPTGKEKAPQDLRSNSGSSLR*RPQSLL
Trigger: CAGAAGAGATTGTGGACGGCAACGCAAAGATGACCC...ACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCCAGTGGGCACTGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR GCA 90 bp CCTCCAGTGCCCACTGGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTGTTCACGATGTCCTCTaGATCCAGCATCTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: PPVPTGKEKAPQDLRSNSVHDVL*IQHLGD
Trigger: ATCCCCAAGATGCTGGATGCAGAGGACATCGTGAAC...ACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCCAGTGGGCACTGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252699.7
ENST00000634960.2
CDS-3UTR GCA 90 bp AAATATCCTCCAGTGCCCACTGGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTCGTTTTGGCACCAGCTaGTGCACCTTCTCCCACTTG +
Preference number: 4 (lower is better)
Translates to: KYPPVPTGKEKAPQDLRSRFGTS*CTFSHL
Trigger: CAAGTGGGAGAAGGTGCAGCAGCTGGTGCCAAAACG...ACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCCAGTGGGCACTGGAGGATATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR GCA 90 bp GGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTACCCACACATCGAGTGTGGCCCACCTCACCTaGATCTTCTGTGAGTACCAC +
Preference number: 4 (lower is better)
Translates to: GKEKAPQDLRSNSTHTSSVAHLT*IFCEYH
Trigger: GTGGTACTCACAGAAGATGCAGGTGAGGTGGGCCAC...ACTCGATGTGTGGGTACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR GCA 90 bp TCTGGCCTGCGTACTCCTCACTCAGAAACAAGAACAGCGACAGCCCTTCTCGAGAGAAATATCCTCCAGTaGCCACTGGCAAGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: SGLRTPHSETRTATALLERNILQ*PLARRK
Trigger: CTTTCTCCTTGCCAGTGGGCACTGGAGGATATTTCT...CTCGAGAAGGGCTGTCGCTGTTCTTGTTTCTGAGTGAGGAGTACGCAGGCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR GCA 90 bp CCTCCAGTGCCCACTGGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTCATCTGGCCTCAGAGTaGCCACAATATCCTCTGCAT +
Preference number: 4 (lower is better)
Translates to: PPVPTGKEKAPQDLRSNSHLASE*PQYPLH
Trigger: ATGCAGAGGATATTGTGGGCACTCTGAGGCCAGATG...ACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCCAGTGGGCACTGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440400.2
CDS-3UTR CCA 90 bp TCTGGCCTGCGTACTCCTCACTCAGAAACAAGAACAGCGACAGCCCTTCTCGAGTCCTTCCAGCTGATGTaGAAGTTCTGCACATTGACG +
Preference number: 4 (lower is better)
Translates to: SGLRTPHSETRTATALLESFQLM*KFCTLT
Trigger: CGTCAATGTGCAGAACTTCCACATCAGCTGGAAGGA...CTCGAGAAGGGCTGTCGCTGTTCTTGTTTCTGAGTGAGGAGTACGCAGGCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CCA 90 bp CTTCATTATGAGAGCAGGAGAGACGGCAGAGATATGTTGCTAGGTGAATATATACTGCTGGGGCCGTACTaGTACGACTGGTTCGCCGCG +
Preference number: 4 (lower is better)
Translates to: LHYESRRDGRDMLLGEYILLGPY*YDWFAA
Trigger: CGCGGCGAACCAGTCGTACCAGTACGGCCCCAGCAG...TATATATTCACCTAGCAACATATCTCTGCCGTCTCTCCTGCTCTCATAATGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CCA 90 bp GAGAAAGCCCCACAGGATTTAAGGAGTAACAGTACCCACACATCGAGTCACGTGGGCTCTCCTAGAAGGTaGAGGACAGACACAGGAGAA +
Preference number: 4 (lower is better)
Translates to: EKAPQDLRSNSTHTSSHVGSPRR*RTDTGE
Trigger: TTCTCCTGTGTCTGTCCTCCACCTTCTAGGAGAGCC...CACGTGACTCGATGTGTGGGTACTGTTACTCCTTAAATCCTGTGGGGCTTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp CTTCATTATGAGAGCAGGAGAGACGGCAGAGATATGTTGCTAGGTGAATATATAAAGGGGTACGGGGACTaGTGGGCACTCACCCTGCCC +
Preference number: 4 (lower is better)
Translates to: LHYESRRDGRDMLLGEYIKGYGD*WALTLP
Trigger: GGGCAGGGTGAGTGCCCACCAGTCCCCGTACCCCTT...TATATATTCACCTAGCAACATATCTCTGCCGTCTCTCCTGCTCTCATAATGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR TCA 90 bp GAGAAAGCCCCACAGGATTTAAGGAGTAACAGTACCCACACATCGAGTCACGTGGGAAGTTCTGCACATTaGCGTTCTTATACGGGGCTG +
Preference number: 4 (lower is better)
Translates to: EKAPQDLRSNSTHTSSHVGSSAH*RSYTGL
Trigger: CAGCCCCGTATAAGAACGTCAATGTGCAGAACTTCC...CACGTGACTCGATGTGTGGGTACTGTTACTCCTTAAATCCTGTGGGGCTTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR TCA 90 bp GGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTACCCACACATCGAGTCGAGCTAGTCCACGTTaGCAGCTTAAGACAGTGCTA +
Preference number: 4 (lower is better)
Translates to: GKEKAPQDLRSNSTHTSSRASPR*QLKTVL
Trigger: TAGCACTGTCTTAAGCTGTCAACGTGGACTAGCTCG...ACTCGATGTGTGGGTACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR GCA 90 bp CTTCATTATGAGAGCAGGAGAGACGGCAGAGATATGTTGCTAGGTGAATATATAAACTCGGCCTCACCCTaGCGGTCGTTCTCCACGTCG +
Preference number: 4 (lower is better)
Translates to: LHYESRRDGRDMLLGEYINSASP*RSFSTS
Trigger: CGACGTGGAGAACGACCGGCAGGGTGAGGCCGAGTT...TATATATTCACCTAGCAACATATCTCTGCCGTCTCTCCTGCTCTCATAATGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252699.7
ENST00000634960.2
CDS-3UTR GCA 90 bp ACATGTTTTATTATCCTGTCCCCAGAGGGTGGTTTATCCAGAAACCAAGAAAAAGGTGGGCACTCACCCTaGCCCTCTCTGCACAGGCCA +
Preference number: 4 (lower is better)
Translates to: TCFIILSPEGGLSRNQEKGGHSP*PSLHRP
Trigger: TGGCCTGTGCAGAGAGGGGCAGGGTGAGTGCCCACC...TTTTTCTTGGTTTCTGGATAAACCACCCTCTGGGGACAGGATAATAAAACATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp AAATATCCTCCAGTGCCCACTGGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTCGCGGATGTGCTCCATaGTATAGTTGGTGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: KYPPVPTGKEKAPQDLRSRGCAP*YSWCAC
Trigger: ACAAGCACACCAACTATACCATGGAGCACATCCGCG...ACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCCAGTGGGCACTGGAGGATATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp GGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTACCCACACATCGAGTCCTGTCCCCAGAGGGTaGTTTATCCAGAAACCAAGA +
Preference number: 4 (lower is better)
Translates to: GKEKAPQDLRSNSTHTSSPVPRG*FIQKPR
Trigger: TCTTGGTTTCTGGATAAACCACCCTCTGGGGACAGG...ACTCGATGTGTGGGTACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp ACATGTTTTATTATCCTGTCCCCAGAGGGTGGTTTATCCAGAAACCAAGAAAAAAAGGGGTACGGGGACTaGTGGGCACTCACCCTGCCC +
Preference number: 4 (lower is better)
Translates to: TCFIILSPEGGLSRNQEKKGYGD*WALTLP
Trigger: GGGCAGGGTGAGTGCCCACCAGTCCCCGTACCCCTT...TTTTTCTTGGTTTCTGGATAAACCACCCTCTGGGGACAGGATAATAAAACATGT
50% GC, longest homopolymer 7 nt, total homopolymer stretches 23 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp CTTCATTATGAGAGCAGGAGAGACGGCAGAGATATGTTGCTAGGTGAATATATATTCCCTGTGGGCCACTaGGCTCAGAAGCAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: LHYESRRDGRDMLLGEYIFPVGH*AQKQPP
Trigger: GGGAGGCTGCTTCTGAGCCCAGTGGCCCACAGGGAA...TATATATTCACCTAGCAACATATCTCTGCCGTCTCTCCTGCTCTCATAATGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR GCA 90 bp ACATGTTTTATTATCCTGTCCCCAGAGGGTGGTTTATCCAGAAACCAAGAAAAAGCTCAGGCTCTGTCCTaGGAGCTCCCTGCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: TCFIILSPEGGLSRNQEKAQALS*ELPASS
Trigger: GCTTGAGGCAGGGAGCTCGCAGGACAGAGCCTGAGC...TTTTTCTTGGTTTCTGGATAAACCACCCTCTGGGGACAGGATAATAAAACATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR GCA 90 bp ACATGTTTTATTATCCTGTCCCCAGAGGGTGGTTTATCCAGAAACCAAGAAAAACTCTGCACAGGCCACTaGAGCCAGCACCTGGATGGG +
Preference number: 4 (lower is better)
Translates to: TCFIILSPEGGLSRNQEKLCTGH*SQHLDG
Trigger: CCCATCCAGGTGCTGGCTGCAGTGGCCTGTGCAGAG...TTTTTCTTGGTTTCTGGATAAACCACCCTCTGGGGACAGGATAATAAAACATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp ACATGTTTTATTATCCTGTCCCCAGAGGGTGGTTTATCCAGAAACCAAGAAAAACATTGCCCGCGCTGCTaGGGCCGTACTGGTACGACT +
Preference number: 4 (lower is better)
Translates to: TCFIILSPEGGLSRNQEKHCPRC*GRTGTT
Trigger: AGTCGTACCAGTACGGCCCCAGCAGCGCGGGCAATG...TTTTTCTTGGTTTCTGGATAAACCACCCTCTGGGGACAGGATAATAAAACATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CCA 90 bp GGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTACCCACACATCGAGTTCCTTCCAGCTGATGTaGAAGTTCTGCACATTGACG +
Preference number: 4 (lower is better)
Translates to: GKEKAPQDLRSNSTHTSSSFQLM*KFCTLT
Trigger: CGTCAATGTGCAGAACTTCCACATCAGCTGGAAGGA...ACTCGATGTGTGGGTACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR GCA 90 bp AAATATCCTCCAGTGCCCACTGGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTACATTGTTGATTTTGTaGACTCTCATCTTCCCCCGC +
Preference number: 4 (lower is better)
Translates to: KYPPVPTGKEKAPQDLRSTLLIL*TLIFPR
Trigger: GCGGGGGAAGATGAGAGTGCACAAAATCAACAATGT...ACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCCAGTGGGCACTGGAGGATATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR GCA 90 bp CTTCATTATGAGAGCAGGAGAGACGGCAGAGATATGTTGCTAGGTGAATATATATTGGCGTATTCCAGGTaGAGCTGGTCGATGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LHYESRRDGRDMLLGEYILAYSR*SWSMAS
Trigger: GGAGGCCATCGACCAGCTGCACCTGGAATACGCCAA...TATATATTCACCTAGCAACATATCTCTGCCGTCTCTCCTGCTCTCATAATGAAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR GCA 90 bp ACATGTTTTATTATCCTGTCCCCAGAGGGTGGTTTATCCAGAAACCAAGAAAAAACCGGGATAGCCGTCTaGGTGTGGACTTCGAGCGGT +
Preference number: 4 (lower is better)
Translates to: TCFIILSPEGGLSRNQEKTGIAV*VWTSSG
Trigger: ACCGCTCGAAGTCCACACGCAGACGGCTATCCCGGT...TTTTTCTTGGTTTCTGGATAAACCACCCTCTGGGGACAGGATAATAAAACATGT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CCA 90 bp CTTCATTATGAGAGCAGGAGAGACGGCAGAGATATGTTGCTAGGTGAATATATAACTCCAGGAGGTCGCTaGCCAGCTTCTCGTAGTCCT +
Preference number: 4 (lower is better)
Translates to: LHYESRRDGRDMLLGEYITPGGR*PASRSP
Trigger: AGGACTACGAGAAGCTGGCCAGCGACCTCCTGGAGT...TATATATTCACCTAGCAACATATCTCTGCCGTCTCTCCTGCTCTCATAATGAAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CCA 90 bp ACATGTTTTATTATCCTGTCCCCAGAGGGTGGTTTATCCAGAAACCAAGAAAAACCCGGTGCTTCAGCATaGCTTCCTTCCCGTCAGTCC +
Preference number: 4 (lower is better)
Translates to: TCFIILSPEGGLSRNQEKPGASA*LPSRQS
Trigger: GGACTGACGGGAAGGAAGCCATGCTGAAGCACCGGG...TTTTTCTTGGTTTCTGGATAAACCACCCTCTGGGGACAGGATAATAAAACATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CCA 90 bp ACATGTTTTATTATCCTGTCCCCAGAGGGTGGTTTATCCAGAAACCAAGAAAAATCCCTAGGCCTTGCCTaGCATGGGTGCCACTCTCTC +
Preference number: 4 (lower is better)
Translates to: TCFIILSPEGGLSRNQEKSLGLA*HGCHSL
Trigger: GAGAGAGTGGCACCCATGCCAGGCAAGGCCTAGGGA...TTTTTCTTGGTTTCTGGATAAACCACCCTCTGGGGACAGGATAATAAAACATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR GCA 90 bp ACATGTTTTATTATCCTGTCCCCAGAGGGTGGTTTATCCAGAAACCAAGAAAAACATCGGAGTCCATGCTaGCTGTCTGCTTCTTGTCGA +
Preference number: 4 (lower is better)
Translates to: TCFIILSPEGGLSRNQEKHRSPC*LSASCR
Trigger: TCGACAAGAAGCAGACAGGCAGCATGGACTCCGATG...TTTTTCTTGGTTTCTGGATAAACCACCCTCTGGGGACAGGATAATAAAACATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000440400.2
ENST00000635719.1
CDS-3UTR CCA 90 bp ACATGTTTTATTATCCTGTCCCCAGAGGGTGGTTTATCCAGAAACCAAGAAAAAGGCTCTCCTAGAAGGTaGAGGACAGACACAGGAGAA +
Preference number: 4 (lower is better)
Translates to: TCFIILSPEGGLSRNQEKGSPRR*RTDTGE
Trigger: TTCTCCTGTGTCTGTCCTCCACCTTCTAGGAGAGCC...TTTTTCTTGGTTTCTGGATAAACCACCCTCTGGGGACAGGATAATAAAACATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR TCA 90 bp CTTCATTATGAGAGCAGGAGAGACGGCAGAGATATGTTGCTAGGTGAATATATACTTTGTTCACATTGTTaGTTTTGTGCACTCTCATCT +
Preference number: 4 (lower is better)
Translates to: LHYESRRDGRDMLLGEYILCSHC*FCALSS
Trigger: AGATGAGAGTGCACAAAATCAACAATGTGAACAAAG...TATATATTCACCTAGCAACATATCTCTGCCGTCTCTCCTGCTCTCATAATGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS GCA 90 bp CCTGGGCCATGTAGTCGCCCATGCTGCCCCCGCCGCCAGCGCCATTaGCCGCGCTGCTGGGGCCGTACTGGTACGACTGGTTCGCCGCGT +
Preference number: 5 (lower is better)
Translates to: PGPCSRPCCPRRQRH*PRCWGRTGTTGSPR
Trigger: ACGCGGCGAACCAGTCGTACCAGTACGGCCCCAGCAGCGCGGGCAATGGCGCTGGCGGCGGGGGCAGCATGGGCGACTACATGGCCCAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000252699.7
ENST00000390009.7
ENST00000424234.7
ENST00000440400.2
ENST00000588618.5
ENST00000589528.1
ENST00000634514.1
ENST00000634682.1
ENST00000634692.1
ENST00000634960.2
ENST00000635260.1
CDS CCA 90 bp GGCCGGGCCGGCCTGAGGCTCATGCAGGAGGAAGAGCACTTGCTCTaGACTGGAAGCCAGCCCCAGGCCTGCGTGGACATGCCTTGCGGG +
Preference number: 5 (lower is better)
Translates to: GRAGLRLMQEEEHLL*TGSQPQACVDMPCG
Trigger: CCCGCAAGGCATGTCCACGCAGGCCTGGGGCTGGCTTCCAGTCCAGAGCAAGTGCTCTTCCTCCTGCATGAGCCTCAGGCCGGCCCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489451.1
ENST00000635294.1
CDS CCA 90 bp TGCAGTTGGGGCACTGGGGACCCTATTCCAGGCCTTGAGGCAGGCTaGGCCTCGGCGTGCTGCCGCCACCAGTCTGGGCAGGCTGTGGTG +
Preference number: 5 (lower is better)
Translates to: CSWGTGDPIPGLEAG*ASACCRHQSGQAVV
Trigger: CACCACAGCCTGCCCAGACTGGTGGCGGCAGCACGCCGAGGCCCAGCCTGCCTCAAGGCCTGGAATAGGGTCCCCAGTGCCCCAACTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588618.5
ENST00000635260.1
CDS-3UTR CAA 90 bp GTCCCCAGAGACCCACGCCCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCCTGCTCAGGGCAGGGTaGCTGAGCAAGACCACCTCC +
Preference number: 5 (lower is better)
Translates to: VPRDPRPTQTRRSISKGPLLRAG*LSKTTS
Trigger: GGAGGTGGTCTTGCTCAGCAACCCTGCCCTGAGCAG...GGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGGCGTGGGTCTCTGGGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS TCA 90 bp TGGAAGGAGGTGCAGTTGGGGCACTGGGGACCCTATTCCAGGCCTTaGGGCAGGCTGGGCCTCGGCGTGCTGCCGCCACCAGTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: WKEVQLGHWGPYSRP*GRLGLGVLPPPVWA
Trigger: TGCCCAGACTGGTGGCGGCAGCACGCCGAGGCCCAGCCTGCCTCAAGGCCTGGAATAGGGTCCCCAGTGCCCCAACTGCACCTCCTTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588618.5
ENST00000635260.1
CDS-3UTR CAA 90 bp GCCGCTACCGGGATAGCCGTCTGCGTGTGGACTTCGAGCGGTTCGTGTCCTGTGAGGCCGTCGGGGGTGTaGGGTCAGGTCTCTGGGGCC +
Preference number: 5 (lower is better)
Translates to: AATGIAVCVWTSSGSCPVRPSGV*GQVSGA
Trigger: GGCCCCAGAGACCTGACCCAACACCCCCGACGGCCT...CACAGGACACGAACCGCTCGAAGTCCACACGCAGACGGCTATCCCGGTAGCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CAA 90 bp CCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGAGGCCGTCGGGGGTGTaGGGTCAGGTCTCTGGGGCC +
Preference number: 5 (lower is better)
Translates to: PGMGATLSGIHLSGASLWRPSGV*GQVSGA
Trigger: GGCCCCAGAGACCTGACCCAACACCCCCGACGGCCT...CCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS TCA 90 bp AGGCAGGAGAGAGTGAAAGACGCAGGGAGGGCGGCCGGGCCGGCCTaGGGCTCATGCAGGAGGAAGAGCACTTGCTCTGGACTGGAAGCC +
Preference number: 5 (lower is better)
Translates to: RQERVKDAGRAAGPA*GSCRRKSTCSGLEA
Trigger: GGCTTCCAGTCCAGAGCAAGTGCTCTTCCTCCTGCATGAGCCTCAGGCCGGCCCGGCCGCCCTCCCTGCGTCTTTCACTCTCTCCTGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489451.1
ENST00000635294.1
CDS TCA 90 bp GCTGGGCCTCGGCGTGCTGCCGCCACCAGTCTGGGCAGGCTGTGGTaGGAGCCAGGTGATGATAGTGTCCTGAGCCCGCACGTACTTGAG +
Preference number: 5 (lower is better)
Translates to: AGPRRAAATSLGRLW*EPGDDSVLSPHVLE
Trigger: CTCAAGTACGTGCGGGCTCAGGACACTATCATCACCTGGCTCTCACCACAGCCTGCCCAGACTGGTGGCGGCAGCACGCCGAGGCCCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588618.5
ENST00000635260.1
CDS CCA 90 bp GGCCGGCCTGAGGCTCATGCAGGAGGAAGAGCACTTGCTCTGGACTaGAAGCCAGCCCCAGGCCTGCGTGGACATGCCTTGCGGGGTTTT +
Preference number: 5 (lower is better)
Translates to: GRPEAHAGGRALALD*KPAPGLRGHALRGF
Trigger: AAAACCCCGCAAGGCATGTCCACGCAGGCCTGGGGCTGGCTTCCAGTCCAGAGCAAGTGCTCTTCCTCCTGCATGAGCCTCAGGCCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489451.1
ENST00000635294.1
CDS-3UTR CAA 90 bp AGGATCTCCGGATGGGCGCACCTGCTGCTCAGGGCAGGGTTGCTGAGCAAGACCAGAAGGAGCCCTTCCTaGGCCGAGGTCTCTTCCACG +
Preference number: 5 (lower is better)
Translates to: RISGWAHLLLRAGLLSKTRRSPS*AEVSST
Trigger: CGTGGAAGAGACCTCGGCCAAGGAAGGGCTCCTTCT...GGTCTTGCTCAGCAACCCTGCCCTGAGCAGCAGGTGCGCCCATCCGGAGATCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CAA 90 bp CCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCTGCTCAGGGCAGGGTaGCTGAGCAAGACCACCTCC +
Preference number: 5 (lower is better)
Translates to: PGMGATLSGIHLSGASLWLLRAG*LSKTTS
Trigger: GGAGGTGGTCTTGCTCAGCAACCCTGCCCTGAGCAG...CCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS GCA 90 bp AGCAGAGCCCTGAAGTCATCGGAGTCCATGCTGCCTGTCTGCTTCTaGTCCGAGGACGCAGGCATAGCAGAGGAGGCCGGGCCCAGAGTA +
Preference number: 5 (lower is better)
Translates to: SRALKSSESMLPVCF*SEDAGIAEEAGPRV
Trigger: TACTCTGGGCCCGGCCTCCTCTGCTATGCCTGCGTCCTCGGAGCAGAAGCAGACAGGCAGCATGGACTCCGATGACTTCAGGGCTCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477174.1
ENST00000635695.1
CDS GCA 90 bp GAGATAAGCAGAGCCCTGAAGTCATCGGAGTCCATGCTGCCTGTCTaGTTCTGCTCCGAGGACGCAGGCATAGCAGAGGAGGCCGGGCCC +
Preference number: 5 (lower is better)
Translates to: EISRALKSSESMLPV*FCSEDAGIAEEAGP
Trigger: GGGCCCGGCCTCCTCTGCTATGCCTGCGTCCTCGGAGCAGAAGCAGACAGGCAGCATGGACTCCGATGACTTCAGGGCTCTGCTTATCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477174.1
ENST00000635695.1
CDS-3UTR CAA 90 bp GGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCCCTCCTGGATAGTCTTTaGGGGCACACGGTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: GMGATLSGIHLSGASLWPLLDSL*GHTVLQ
Trigger: CTGGAGGACCGTGTGCCCCAAAAGACTATCCAGGAG...GGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CAA 90 bp AGGATCTCCGGATGGGCGCACCTGCTGCTCAGGGCAGGGTTGCTGAGCAAGACCCTCCTGGATAGTCTTTaGGGGCACACGGTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: RISGWAHLLLRAGLLSKTLLDSL*GHTVLQ
Trigger: CTGGAGGACCGTGTGCCCCAAAAGACTATCCAGGAG...GGTCTTGCTCAGCAACCCTGCCCTGAGCAGCAGGTGCGCCCATCCGGAGATCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS TCA 90 bp ATCTGCACAGAGAGAGAGAGAAAGAGAGAGAGAGGCAGGAGAGAGTaGAAGACGCAGGGAGGGCGGCCGGGCCGGCCTGAGGCTCATGCA +
Preference number: 5 (lower is better)
Translates to: ICTERERKRERGRRE*KTQGGRPGRPEAHA
Trigger: TGCATGAGCCTCAGGCCGGCCCGGCCGCCCTCCCTGCGTCTTTCACTCTCTCCTGCCTCTCTCTCTCTTTCTCTCTCTCTCTGTGCAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489451.1
ENST00000635294.1
CDS-3UTR CAA 90 bp CCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGAATCGGCTATAAGGCATTGTTCAGGTaGGTGACAGGGTCGTCCTTC +
Preference number: 5 (lower is better)
Translates to: PTQTRRSISKGPGQRIGYKALFR*VTGSSF
Trigger: GAAGGACGACCCTGTCACCAACCTGAACAATGCCTT...ATAGCCGATTCTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CAA 90 bp ACTGCTCACGGCCGGGTGACCACTCTGGCCTGCGTACTCCTCACTCAGAAACAACATGCCGTGAAGGTCTaGCGCTGCTGCTTCTCCCAG +
Preference number: 5 (lower is better)
Translates to: TAHGRVTTLACVLLTQKQHAVKV*RCCFSQ
Trigger: CTGGGAGAAGCAGCAGCGCAAGACCTTCACGGCATG...TTGTTTCTGAGTGAGGAGTACGCAGGCCAGAGTGGTCACCCGGCCGTGAGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CAA 90 bp AGACCCACGCCCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGTTCACATTGTTGATTTaGTGCACTCTCATCTTCCCC +
Preference number: 5 (lower is better)
Translates to: RPTPDADPEEHQQGARAEFTLLI*CTLIFP
Trigger: GGGGAAGATGAGAGTGCACAAAATCAACAATGTGAA...CTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGGCGTGGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CAA 90 bp ACTGCTCACGGCCGGGTGACCACTCTGGCCTGCGTACTCCTCACTCAGAAACAAAGAAGGAGCCCTTCCTaGGCCGAGGTCTCTTCCACG +
Preference number: 5 (lower is better)
Translates to: TAHGRVTTLACVLLTQKQRRSPS*AEVSST
Trigger: CGTGGAAGAGACCTCGGCCAAGGAAGGGCTCCTTCT...TTGTTTCTGAGTGAGGAGTACGCAGGCCAGAGTGGTCACCCGGCCGTGAGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CAA 90 bp GATGGAGGTGGCCACCTTCTCCTAGGATCTCCGGATGGGCGCACCTGCTGCTCAACCTTACAGATCCGGTaGGCGGCAGTTTCAGCCTTC +
Preference number: 5 (lower is better)
Translates to: DGGGHLLLGSPDGRTCCSTLQIR*AAVSAF
Trigger: GAAGGCTGAAACTGCCGCCAACCGGATCTGTAAGGT...TGAGCAGCAGGTGCGCCCATCCGGAGATCCTAGGAGAAGGTGGCCACCTCCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CAA 90 bp CCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGACCTTACAGATCCGGTaGGCGGCAGTTTCAGCCTTC +
Preference number: 5 (lower is better)
Translates to: PGMGATLSGIHLSGASLWTLQIR*AAVSAF
Trigger: GAAGGCTGAAACTGCCGCCAACCGGATCTGTAAGGT...CCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CAA 90 bp AGGATCTCCGGATGGGCGCACCTGCTGCTCAGGGCAGGGTTGCTGAGCAAGACCAGGGTCATCTTTGCGTaGCCGTCCACAATCTCTTCT +
Preference number: 5 (lower is better)
Translates to: RISGWAHLLLRAGLLSKTRVIFA*PSTISS
Trigger: AGAAGAGATTGTGGACGGCAACGCAAAGATGACCCT...GGTCTTGCTCAGCAACCCTGCCCTGAGCAGCAGGTGCGCCCATCCGGAGATCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CAA 90 bp CCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGAATCGGCTATTGGAAGTTCTGCACATaGACGTTCTTATACGGGGCT +
Preference number: 5 (lower is better)
Translates to: PTQTRRSISKGPGQRIGYWKFCT*TFLYGA
Trigger: AGCCCCGTATAAGAACGTCAATGTGCAGAACTTCCA...ATAGCCGATTCTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CAA 90 bp CTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCCTCACTGCTCACGGCCGGGTTCGTCCTTCCTCAGCTaGTCATACTCAATCAGCTCT +
Preference number: 5 (lower is better)
Translates to: LASTCLGLVSGPHCSRPGSSFLS*SYSISS
Trigger: AGAGCTGATTGAGTATGACAAGCTGAGGAAGGACGA...ACCCGGCCGTGAGCAGTGAGGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CAA 90 bp CCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGTGCTGCCAGCCATTGTaGATGTCCGAGACCATCTTG +
Preference number: 5 (lower is better)
Translates to: PGMGATLSGIHLSGASLWCCQPL*MSETIL
Trigger: CAAGATGGTCTCGGACATCAACAATGGCTGGCAGCA...CCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CAA 90 bp AAATATCCTCCAGTGCCCACTGGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAGGCCGTCGGGGGTGTaGGGTCAGGTCTCTGGGGCC +
Preference number: 5 (lower is better)
Translates to: KYPPVPTGKEKAPQDLRSRPSGV*GQVSGA
Trigger: GGCCCCAGAGACCTGACCCAACACCCCCGACGGCCT...ACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCCAGTGGGCACTGGAGGATATTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CAA 90 bp TCTGGCCTGCGTACTCCTCACTCAGAAACAAGAACAGCGACAGCCCTTCTCGAGCTGCTCAGGGCAGGGTaGCTGAGCAAGACCACCTCC +
Preference number: 5 (lower is better)
Translates to: SGLRTPHSETRTATALLELLRAG*LSKTTS
Trigger: GGAGGTGGTCTTGCTCAGCAACCCTGCCCTGAGCAG...CTCGAGAAGGGCTGTCGCTGTTCTTGTTTCTGAGTGAGGAGTACGCAGGCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CAA 90 bp GATGGAGGTGGCCACCTTCTCCTAGGATCTCCGGATGGGCGCACCTGCTGCTCAAACAGGCCCAGAGGATaGAAGGGATCAGCCTGTACT +
Preference number: 5 (lower is better)
Translates to: DGGGHLLLGSPDGRTCCSNRPRG*KGSACT
Trigger: AGTACAGGCTGATCCCTTCAATCCTCTGGGCCTGTT...TGAGCAGCAGGTGCGCCCATCCGGAGATCCTAGGAGAAGGTGGCCACCTCCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CAA 90 bp GATGGAGGTGGCCACCTTCTCCTAGGATCTCCGGATGGGCGCACCTGCTGCTCACTGCCTGTCTGCTTCTaGTCGAAGTGGTTGAAGGAC +
Preference number: 5 (lower is better)
Translates to: DGGGHLLLGSPDGRTCCSLPVCF*SKWLKD
Trigger: GTCCTTCAACCACTTCGACAAGAAGCAGACAGGCAG...TGAGCAGCAGGTGCGCCCATCCGGAGATCCTAGGAGAAGGTGGCCACCTCCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440400.2
ENST00000635719.1
CDS-3UTR CAA 90 bp ATTGAAGGGATCAGCCTGTACTCACCCTGCCGGGATGGGGCAGAGTTGGGGTGTCGGTGGATCAGGGCATaGAAGGCAAGACCATCCTTC +
Preference number: 5 (lower is better)
Translates to: IEGISLYSPCRDGAELGCRWIRA*KARPSF
Trigger: GAAGGATGGTCTTGCCTTCAATGCCCTGATCCACCG...ACACCCCAACTCTGCCCCATCCCGGCAGGGTGAGTACAGGCTGATCCCTTCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CAA 90 bp AGGATCTCCGGATGGGCGCACCTGCTGCTCAGGGCAGGGTTGCTGAGCAAGACCTCGTCCTTCCTCAGCTaGTCATACTCAATCAGCTCT +
Preference number: 5 (lower is better)
Translates to: RISGWAHLLLRAGLLSKTSSFLS*SYSISS
Trigger: AGAGCTGATTGAGTATGACAAGCTGAGGAAGGACGA...GGTCTTGCTCAGCAACCCTGCCCTGAGCAGCAGGTGCGCCCATCCGGAGATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CAA 90 bp CCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGAATCGGCTATAGCGCTTTGTTCACATaGTTGATTTTGTGCACTCTC +
Preference number: 5 (lower is better)
Translates to: PTQTRRSISKGPGQRIGYSALFT*LILCTL
Trigger: GAGAGTGCACAAAATCAACAATGTGAACAAAGCGCT...ATAGCCGATTCTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CAA 90 bp GATGGAGGTGGCCACCTTCTCCTAGGATCTCCGGATGGGCGCACCTGCTGCTCATCGTCCTTCCTCAGCTaGTCATACTCAATCAGCTCT +
Preference number: 5 (lower is better)
Translates to: DGGGHLLLGSPDGRTCCSSSFLS*SYSISS
Trigger: AGAGCTGATTGAGTATGACAAGCTGAGGAAGGACGA...TGAGCAGCAGGTGCGCCCATCCGGAGATCCTAGGAGAAGGTGGCCACCTCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CAA 90 bp ATTGAAGGGATCAGCCTGTACTCACCCTGCCGGGATGGGGCAGAGTTGGGGTGTAAGTGCTGCCAGCCATaGTTGATGTCCGAGACCATC +
Preference number: 5 (lower is better)
Translates to: IEGISLYSPCRDGAELGCKCCQP*LMSETI
Trigger: GATGGTCTCGGACATCAACAATGGCTGGCAGCACTT...ACACCCCAACTCTGCCCCATCCCGGCAGGGTGAGTACAGGCTGATCCCTTCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CAA 90 bp ACTGCTCACGGCCGGGTGACCACTCTGGCCTGCGTACTCCTCACTCAGAAACAAAAGTGCTGCCAGCCATaGTTGATGTCCGAGACCATC +
Preference number: 5 (lower is better)
Translates to: TAHGRVTTLACVLLTQKQKCCQP*LMSETI
Trigger: GATGGTCTCGGACATCAACAATGGCTGGCAGCACTT...TTGTTTCTGAGTGAGGAGTACGCAGGCCAGAGTGGTCACCCGGCCGTGAGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CAA 90 bp GAGAAAGCCCCACAGGATTTAAGGAGTAACAGTACCCACACATCGAGTCACGTGCGGGATGGGGCAGAGTaGGGGTGTGACACCCTGTGG +
Preference number: 5 (lower is better)
Translates to: EKAPQDLRSNSTHTSSHVRDGAE*GCDTLW
Trigger: CCACAGGGTGTCACACCCCAACTCTGCCCCATCCCG...CACGTGACTCGATGTGTGGGTACTGTTACTCCTTAAATCCTGTGGGGCTTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CAA 90 bp ATTGAAGGGATCAGCCTGTACTCACCCTGCCGGGATGGGGCAGAGTTGGGGTGTAACAGGCCCAGAGGATaGAAGGGATCAGCCTGTACT +
Preference number: 5 (lower is better)
Translates to: IEGISLYSPCRDGAELGCNRPRG*KGSACT
Trigger: AGTACAGGCTGATCCCTTCAATCCTCTGGGCCTGTT...ACACCCCAACTCTGCCCCATCCCGGCAGGGTGAGTACAGGCTGATCCCTTCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CAA 90 bp TCTGGCCTGCGTACTCCTCACTCAGAAACAAGAACAGCGACAGCCCTTCTCGAGCGGTGGATCAGGGCATaGAAGGCAAGACCATCCTTC +
Preference number: 5 (lower is better)
Translates to: SGLRTPHSETRTATALLERWIRA*KARPSF
Trigger: GAAGGATGGTCTTGCCTTCAATGCCCTGATCCACCG...CTCGAGAAGGGCTGTCGCTGTTCTTGTTTCTGAGTGAGGAGTACGCAGGCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CAA 90 bp TCTGGCCTGCGTACTCCTCACTCAGAAACAAGAACAGCGACAGCCCTTCTCGAGACCTTACAGATCCGGTaGGCGGCAGTTTCAGCCTTC +
Preference number: 5 (lower is better)
Translates to: SGLRTPHSETRTATALLETLQIR*AAVSAF
Trigger: GAAGGCTGAAACTGCCGCCAACCGGATCTGTAAGGT...CTCGAGAAGGGCTGTCGCTGTTCTTGTTTCTGAGTGAGGAGTACGCAGGCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CAA 90 bp TCTGGCCTGCGTACTCCTCACTCAGAAACAAGAACAGCGACAGCCCTTCTCGAGACCAGCTTGACGCCTTaGCTGGCAATAAAGTCCAGC +
Preference number: 5 (lower is better)
Translates to: SGLRTPHSETRTATALLETSLTP*LAIKSS
Trigger: GCTGGACTTTATTGCCAGCAAAGGCGTCAAGCTGGT...CTCGAGAAGGGCTGTCGCTGTTCTTGTTTCTGAGTGAGGAGTACGCAGGCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CAA 90 bp ACTGCTCACGGCCGGGTGACCACTCTGGCCTGCGTACTCCTCACTCAGAAACAATGGAAGTTCTGCACATaGACGTTCTTATACGGGGCT +
Preference number: 5 (lower is better)
Translates to: TAHGRVTTLACVLLTQKQWKFCT*TFLYGA
Trigger: AGCCCCGTATAAGAACGTCAATGTGCAGAACTTCCA...TTGTTTCTGAGTGAGGAGTACGCAGGCCAGAGTGGTCACCCGGCCGTGAGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CAA 90 bp TCTGGCCTGCGTACTCCTCACTCAGAAACAAGAACAGCGACAGCCCTTCTCGAGTGCTGCCAGCCATTGTaGATGTCCGAGACCATCTTG +
Preference number: 5 (lower is better)
Translates to: SGLRTPHSETRTATALLECCQPL*MSETIL
Trigger: CAAGATGGTCTCGGACATCAACAATGGCTGGCAGCA...CTCGAGAAGGGCTGTCGCTGTTCTTGTTTCTGAGTGAGGAGTACGCAGGCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CAA 90 bp TCTGGCCTGCGTACTCCTCACTCAGAAACAAGAACAGCGACAGCCCTTCTCGAGAGGGTCATCTTTGCGTaGCCGTCCACAATCTCTTCT +
Preference number: 5 (lower is better)
Translates to: SGLRTPHSETRTATALLERVIFA*PSTISS
Trigger: AGAAGAGATTGTGGACGGCAACGCAAAGATGACCCT...CTCGAGAAGGGCTGTCGCTGTTCTTGTTTCTGAGTGAGGAGTACGCAGGCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CAA 90 bp CCTCCAGTGCCCACTGGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTAAGGCATTGTTCAGGTaGGTGACAGGGTCGTCCTTC +
Preference number: 5 (lower is better)
Translates to: PPVPTGKEKAPQDLRSNSKALFR*VTGSSF
Trigger: GAAGGACGACCCTGTCACCAACCTGAACAATGCCTT...ACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCCAGTGGGCACTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CAA 90 bp ATTGAAGGGATCAGCCTGTACTCACCCTGCCGGGATGGGGCAGAGTTGGGGTGTAGCGCTTTGTTCACATaGTTGATTTTGTGCACTCTC +
Preference number: 5 (lower is better)
Translates to: IEGISLYSPCRDGAELGCSALFT*LILCTL
Trigger: GAGAGTGCACAAAATCAACAATGTGAACAAAGCGCT...ACACCCCAACTCTGCCCCATCCCGGCAGGGTGAGTACAGGCTGATCCCTTCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CAA 90 bp ACATGTTTTATTATCCTGTCCCCAGAGGGTGGTTTATCCAGAAACCAAGAAAAAAGGCCGTCGGGGGTGTaGGGTCAGGTCTCTGGGGCC +
Preference number: 5 (lower is better)
Translates to: TCFIILSPEGGLSRNQEKRPSGV*GQVSGA
Trigger: GGCCCCAGAGACCTGACCCAACACCCCCGACGGCCT...TTTTTCTTGGTTTCTGGATAAACCACCCTCTGGGGACAGGATAATAAAACATGT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 23 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CAA 90 bp CCTCCAGTGCCCACTGGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTTGGAAGTTCTGCACATaGACGTTCTTATACGGGGCT +
Preference number: 5 (lower is better)
Translates to: PPVPTGKEKAPQDLRSNSWKFCT*TFLYGA
Trigger: AGCCCCGTATAAGAACGTCAATGTGCAGAACTTCCA...ACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCCAGTGGGCACTGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CAA 90 bp CTTCATTATGAGAGCAGGAGAGACGGCAGAGATATGTTGCTAGGTGAATATATACGGGATGGGGCAGAGTaGGGGTGTGACACCCTGTGG +
Preference number: 5 (lower is better)
Translates to: LHYESRRDGRDMLLGEYIRDGAE*GCDTLW
Trigger: CCACAGGGTGTCACACCCCAACTCTGCCCCATCCCG...TATATATTCACCTAGCAACATATCTCTGCCGTCTCTCCTGCTCTCATAATGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CAA 90 bp AAATATCCTCCAGTGCCCACTGGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTCTGCCTGTCTGCTTCTaGTCGAAGTGGTTGAAGGAC +
Preference number: 5 (lower is better)
Translates to: KYPPVPTGKEKAPQDLRSLPVCF*SKWLKD
Trigger: GTCCTTCAACCACTTCGACAAGAAGCAGACAGGCAG...ACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCCAGTGGGCACTGGAGGATATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440400.2
ENST00000635719.1
CDS-3UTR CAA 90 bp GAGAAAGCCCCACAGGATTTAAGGAGTAACAGTACCCACACATCGAGTCACGTGAGGGTCATCTTTGCGTaGCCGTCCACAATCTCTTCT +
Preference number: 5 (lower is better)
Translates to: EKAPQDLRSNSTHTSSHVRVIFA*PSTISS
Trigger: AGAAGAGATTGTGGACGGCAACGCAAAGATGACCCT...CACGTGACTCGATGTGTGGGTACTGTTACTCCTTAAATCCTGTGGGGCTTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CAA 90 bp ACATGTTTTATTATCCTGTCCCCAGAGGGTGGTTTATCCAGAAACCAAGAAAAACGGGATGGGGCAGAGTaGGGGTGTGACACCCTGTGG +
Preference number: 5 (lower is better)
Translates to: TCFIILSPEGGLSRNQEKRDGAE*GCDTLW
Trigger: CCACAGGGTGTCACACCCCAACTCTGCCCCATCCCG...TTTTTCTTGGTTTCTGGATAAACCACCCTCTGGGGACAGGATAATAAAACATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
ENST00000635719.1
CDS-3UTR CAA 90 bp CTTCATTATGAGAGCAGGAGAGACGGCAGAGATATGTTGCTAGGTGAATATATACATGCCGTGAAGGTCTaGCGCTGCTGCTTCTCCCAG +
Preference number: 5 (lower is better)
Translates to: LHYESRRDGRDMLLGEYIHAVKV*RCCFSQ
Trigger: CTGGGAGAAGCAGCAGCGCAAGACCTTCACGGCATG...TATATATTCACCTAGCAACATATCTCTGCCGTCTCTCCTGCTCTCATAATGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CAA 90 bp CTTCATTATGAGAGCAGGAGAGACGGCAGAGATATGTTGCTAGGTGAATATATAAGAAGGAGCCCTTCCTaGGCCGAGGTCTCTTCCACG +
Preference number: 5 (lower is better)
Translates to: LHYESRRDGRDMLLGEYIRRSPS*AEVSST
Trigger: CGTGGAAGAGACCTCGGCCAAGGAAGGGCTCCTTCT...TATATATTCACCTAGCAACATATCTCTGCCGTCTCTCCTGCTCTCATAATGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CAA 90 bp ACATGTTTTATTATCCTGTCCCCAGAGGGTGGTTTATCCAGAAACCAAGAAAAACATGCCGTGAAGGTCTaGCGCTGCTGCTTCTCCCAG +
Preference number: 5 (lower is better)
Translates to: TCFIILSPEGGLSRNQEKHAVKV*RCCFSQ
Trigger: CTGGGAGAAGCAGCAGCGCAAGACCTTCACGGCATG...TTTTTCTTGGTTTCTGGATAAACCACCCTCTGGGGACAGGATAATAAAACATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CAA 90 bp GGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTACCCACACATCGAGTTTCACATTGTTGATTTaGTGCACTCTCATCTTCCCC +
Preference number: 5 (lower is better)
Translates to: GKEKAPQDLRSNSTHTSSFTLLI*CTLIFP
Trigger: GGGGAAGATGAGAGTGCACAAAATCAACAATGTGAA...ACTCGATGTGTGGGTACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CAA 90 bp CCTCCAGTGCCCACTGGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTAACAGTATAAAGTCCAGCGCTTaGTTCACATTGTTGATTTTG +
Preference number: 5 (lower is better)
Translates to: PPVPTGKEKAPQDLRSNSIKSSA*FTLLIL
Trigger: CAAAATCAACAATGTGAACAAAGCGCTGGACTTTAT...ACTGTTACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCCAGTGGGCACTGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CAA 90 bp CTTCATTATGAGAGCAGGAGAGACGGCAGAGATATGTTGCTAGGTGAATATATACGGTGGATCAGGGCATaGAAGGCAAGACCATCCTTC +
Preference number: 5 (lower is better)
Translates to: LHYESRRDGRDMLLGEYIRWIRA*KARPSF
Trigger: GAAGGATGGTCTTGCCTTCAATGCCCTGATCCACCG...TATATATTCACCTAGCAACATATCTCTGCCGTCTCTCCTGCTCTCATAATGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CAA 90 bp AAATATCCTCCAGTGCCCACTGGCAAGGAGAAAGCCCCACAGGATTTAAGGAGTATAAAGTCCAGCGCTTaGTTCACATTGTTGATTTTG +
Preference number: 5 (lower is better)
Translates to: KYPPVPTGKEKAPQDLRSIKSSA*FTLLIL
Trigger: CAAAATCAACAATGTGAACAAAGCGCTGGACTTTAT...ACTCCTTAAATCCTGTGGGGCTTTCTCCTTGCCAGTGGGCACTGGAGGATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CAA 90 bp ACATGTTTTATTATCCTGTCCCCAGAGGGTGGTTTATCCAGAAACCAAGAAAAATGCTGCCAGCCATTGTaGATGTCCGAGACCATCTTG +
Preference number: 5 (lower is better)
Translates to: TCFIILSPEGGLSRNQEKCCQPL*MSETIL
Trigger: CAAGATGGTCTCGGACATCAACAATGGCTGGCAGCA...TTTTTCTTGGTTTCTGGATAAACCACCCTCTGGGGACAGGATAATAAAACATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CAA 90 bp ACATGTTTTATTATCCTGTCCCCAGAGGGTGGTTTATCCAGAAACCAAGAAAAAAAGTGCTGCCAGCCATaGTTGATGTCCGAGACCATC +
Preference number: 5 (lower is better)
Translates to: TCFIILSPEGGLSRNQEKKCCQP*LMSETI
Trigger: GATGGTCTCGGACATCAACAATGGCTGGCAGCACTT...TTTTTCTTGGTTTCTGGATAAACCACCCTCTGGGGACAGGATAATAAAACATGT
44% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CAA 90 bp ACATGTTTTATTATCCTGTCCCCAGAGGGTGGTTTATCCAGAAACCAAGAAAAAAGCGCTTTGTTCACATaGTTGATTTTGTGCACTCTC +
Preference number: 5 (lower is better)
Translates to: TCFIILSPEGGLSRNQEKSALFT*LILCTL
Trigger: GAGAGTGCACAAAATCAACAATGTGAACAAAGCGCT...TTTTTCTTGGTTTCTGGATAAACCACCCTCTGGGGACAGGATAATAAAACATGT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS-3UTR CAA 90 bp CTTCATTATGAGAGCAGGAGAGACGGCAGAGATATGTTGCTAGGTGAATATATAATAAAGTCCAGCGCTTaGTTCACATTGTTGATTTTG +
Preference number: 5 (lower is better)
Translates to: LHYESRRDGRDMLLGEYIIKSSA*FTLLIL
Trigger: CAAAATCAACAATGTGAACAAAGCGCTGGACTTTAT...TATATATTCACCTAGCAACATATCTCTGCCGTCTCTCCTGCTCTCATAATGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252699.7
ENST00000440400.2
ENST00000634960.2
CDS GCA 72 bp CCCAGTCGTCCTCCTGGGCCATGTAGTCGCCCATGCTaGCCCCGCCGCCAGCGCCATTGCCCGCGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: PSRPPGPCSRPC*PRRQRHCPRCW
Trigger: CCAGCAGCGCGGGCAATGGCGCTGGCGGCGGGGGCAGCATGGGCGACTACATGGCCCAGGAGGACGACTGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000252699.7
ENST00000390009.7
ENST00000424234.7
ENST00000440400.2
ENST00000588618.5
ENST00000589528.1
ENST00000634514.1
ENST00000634682.1
ENST00000634692.1
ENST00000634960.2
ENST00000635260.1
CDS GCA 72 bp TGTAGTCGCCCATGCTGCCCCCGCCGCCAGCGCCATTaGCCGCGCTGCTGGGGCCGTACTGGTACGACTGGT +
Preference number: 6 (lower is better)
Translates to: CSRPCCPRRQRH*PRCWGRTGTTG
Trigger: ACCAGTCGTACCAGTACGGCCCCAGCAGCGCGGGCAATGGCGCTGGCGGCGGGGGCAGCATGGGCGACTACA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000252699.7
ENST00000390009.7
ENST00000424234.7
ENST00000440400.2
ENST00000588618.5
ENST00000589528.1
ENST00000634514.1
ENST00000634682.1
ENST00000634692.1
ENST00000634960.2
ENST00000635260.1
CDS CCA 72 bp GGCACTGGGGACCCTATTCCAGGCCTTGAGGCAGGCTaGGCCTCGGCGTGCTGCCGCCACCAGTCTGGGCAG +
Preference number: 6 (lower is better)
Translates to: GTGDPIPGLEAG*ASACCRHQSGQ
Trigger: CTGCCCAGACTGGTGGCGGCAGCACGCCGAGGCCCAGCCTGCCTCAAGGCCTGGAATAGGGTCCCCAGTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588618.5
ENST00000635260.1
CDS CAA 90 bp GAGGGCGGCCGGGCCGGCCTGAGGCTCATGCAGGAGGAAGAGCACTaGCTCTGGACTGGAAGCCAGCCCCAGGCCTGCGTGGACATGCCT +
Preference number: 6 (lower is better)
Translates to: EGGRAGLRLMQEEEH*LWTGSQPQACVDMP
Trigger: AGGCATGTCCACGCAGGCCTGGGGCTGGCTTCCAGTCCAGAGCAAGTGCTCTTCCTCCTGCATGAGCCTCAGGCCGGCCCGGCCGCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489451.1
ENST00000635294.1
CDS CAA 90 bp CTGGAAGGAGGTGCAGTTGGGGCACTGGGGACCCTATTCCAGGCCTaGAGGCAGGCTGGGCCTCGGCGTGCTGCCGCCACCAGTCTGGGC +
Preference number: 6 (lower is better)
Translates to: LEGGAVGALGTLFQA*RQAGPRRAAATSLG
Trigger: GCCCAGACTGGTGGCGGCAGCACGCCGAGGCCCAGCCTGCCTCAAGGCCTGGAATAGGGTCCCCAGTGCCCCAACTGCACCTCCTTCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588618.5
ENST00000635260.1
CDS CCA 72 bp GGCAGGCTGGGCCTCGGCGTGCTGCCGCCACCAGTCTaGGCAGGCTGTGGTGAGAGCCAGGTGATGATAGTG +
Preference number: 6 (lower is better)
Translates to: GRLGLGVLPPPV*AGCGESQVMIV
Trigger: CACTATCATCACCTGGCTCTCACCACAGCCTGCCCAGACTGGTGGCGGCAGCACGCCGAGGCCCAGCCTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588618.5
ENST00000635260.1
CDS TCA 72 bp GAGAGAGAGAGAAAGAGAGAGAGAGGCAGGAGAGAGTaGAAGACGCAGGGAGGGCGGCCGGGCCGGCCTGAG +
Preference number: 6 (lower is better)
Translates to: ERERKRERGRRE*KTQGGRPGRPE
Trigger: CTCAGGCCGGCCCGGCCGCCCTCCCTGCGTCTTTCACTCTCTCCTGCCTCTCTCTCTCTTTCTCTCTCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489451.1
ENST00000635294.1
CDS GCA 72 bp CTGAAGTCATCGGAGTCCATGCTGCCTGTCTGCTTCTaGTCCGAGGACGCAGGCATAGCAGAGGAGGCCGGG +
Preference number: 6 (lower is better)
Translates to: LKSSESMLPVCF*SEDAGIAEEAG
Trigger: CCCGGCCTCCTCTGCTATGCCTGCGTCCTCGGAGCAGAAGCAGACAGGCAGCATGGACTCCGATGACTTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477174.1
ENST00000635695.1
CDS CCA 72 bp CGAATAGGGTGCATTCCTTTTCTAACCGGCCTGGGCTaGAGACAGACTAGCTGTGGGCCCTATAAAGGCAGC +
Preference number: 6 (lower is better)
Translates to: RIGCIPFLTGLG*RQTSCGPYKGS
Trigger: GCTGCCTTTATAGGGCCCACAGCTAGTCTGTCTCCAGCCCAGGCCGGTTAGAAAAGGAATGCACCCTATTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489451.1
ENST00000635294.1
CDS GCA 72 bp GGCCTTCTCATCTGGCCTCAGAGTGCCCACAATATCTaGACAGAGAGAGAGAGAAAGAGAGAGAGAGGCAGG +
Preference number: 6 (lower is better)
Translates to: GLLIWPQSAHNI*TERERKRERGR
Trigger: CCTGCCTCTCTCTCTCTTTCTCTCTCTCTCTGTGCAGATATTGTGGGCACTCTGAGGCCAGATGAGAAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489451.1
ENST00000635294.1
CDS TCA 72 bp ACCCTAAGGGGCTCCCATGGCCCTCAGAGTGGAACATaGATTTCTTATCCCACACCACAAGGGTCTTGTTGG +
Preference number: 6 (lower is better)
Translates to: TLRGSHGPQSGT*ISYPTPQGSCW
Trigger: CCAACAAGACCCTTGTGGTGTGGGATAAGAAATTCATGTTCCACTCTGAGGGCCATGGGAGCCCCTTAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489451.1
ENST00000635294.1
CDS CAA 72 bp ATCTCTTCTGCCCCGATGGAGACCAGCTTGACGCCTTaGCTGGCAATAAAGTCCAGCGCTTTGTTCACATTG +
Preference number: 6 (lower is better)
Translates to: ISSAPMETSLTP*LAIKSSALFTL
Trigger: CAATGTGAACAAAGCGCTGGACTTTATTGCCAGCAAAGGCGTCAAGCTGGTCTCCATCGGGGCAGAAGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000252699.7
ENST00000424234.7
ENST00000440400.2
ENST00000495553.1
ENST00000588618.5
ENST00000634960.2
ENST00000635260.1
ENST00000635701.1
CDS CAA 90 bp CCGTCCACAATCTCTTCTGCCCCGATGGAGACCAGCTTGACGCCTTaGCTGGCAATAAAGTCCAGCGCTTTGTTCACATTGTTGATTTTG +
Preference number: 6 (lower is better)
Translates to: PSTISSAPMETSLTP*LAIKSSALFTLLIL
Trigger: CAAAATCAACAATGTGAACAAAGCGCTGGACTTTATTGCCAGCAAAGGCGTCAAGCTGGTCTCCATCGGGGCAGAAGAGATTGTGGACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000252699.7
ENST00000424234.7
ENST00000440400.2
ENST00000495553.1
ENST00000588618.5
ENST00000634960.2
ENST00000635260.1
ENST00000635701.1
CDS TCA 72 bp ATTTCTCAGCCACTTCGAAGGCATTGTTCAGGTTGGTaGCAGGGTCGTCCTTCCTCAGCTTGTCATACTCAA +
Preference number: 6 (lower is better)
Translates to: ISQPLRRHCSGW*QGRPSSACHTQ
Trigger: TTGAGTATGACAAGCTGAGGAAGGACGACCCTGTCACCAACCTGAACAATGCCTTCGAAGTGGCTGAGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000252699.7
ENST00000424234.7
ENST00000440400.2
ENST00000588618.5
ENST00000634960.2
ENST00000635153.1
ENST00000635260.1