RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ACTN3 (Homo sapiens)

Ensembl gene IDs: ENSG00000248746

Ensembl transcript IDs: ENST00000502692.5, ENST00000511191.1, ENST00000513398.2

Found 252 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTaGTCCGAGGGACGGATGGGATCAGCCACAGGGTGCATCCTCTCT +
Preference number: 1 (lower is better)
Translates to: GSLFRSTWLAFLLGP*SEGRMGSATGCILS
Trigger: AGAGAGGATGCACCCTGTGGCTGATCCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
3UTR CAA 90 bp GGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTaGCTCCGAGGGACGGATGGGATCAGCCACAGGGTGCATCCTCTC +
Preference number: 2 (lower is better)
Translates to: GIFIQKHLAGFSLRP*LRGTDGISHRVHPL
Trigger: GAGAGGATGCACCCTGTGGCTGATCCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
3UTR-3UTR GCA 90 bp GAGACCCAGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGGGATCAGCCACAGGGTaGATCCTCTCTCCATCTTGC +
Preference number: 2 (lower is better)
Translates to: ETQRGIFIQKHLAGFSLRGSATG*ILSPSC
Trigger: GCAAGATGGAGAGAGGATGCACCCTGTGGCTGATCC...CCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCTGGGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513398.2
3UTR-3UTR CAA 90 bp GCAGAGGACAGCACTCAAACCCTACGACTGGCTCTGGGGGATGTAGGGCACAGTGTAGGTCTCAGAGCCTaGTATTTCTGGATTCAAGTC +
Preference number: 3 (lower is better)
Translates to: AEDSTQTLRLALGDVGHSVGLRA*YFWIQV
Trigger: GACTTGAATCCAGAAATACAAGGCTCTGAGACCTAC...ACTGTGCCCTACATCCCCCAGAGCCAGTCGTAGGGTTTGAGTGCTGTCCTCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511191.1
3UTR-3UTR CAA 90 bp TTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGCATCCTCTCTCCATCTaGCATAGAGAACCTCAGTGG +
Preference number: 3 (lower is better)
Translates to: LFRSTWLAFLLGPCSEGRHPLSI*HREPQW
Trigger: CCACTGAGGTTCTCTATGCAAGATGGAGAGAGGATG...CCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
3UTR-3UTR CAA 90 bp GAGAGACCCAGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTACATCCTCTCTCCATCTaGCATAGAGAACCTCAGTGG +
Preference number: 3 (lower is better)
Translates to: ERPREGSLFRSTWLAFLLHPLSI*HREPQW
Trigger: CCACTGAGGTTCTCTATGCAAGATGGAGAGAGGATG...TAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCTGGGTCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513398.2
CDS-3UTR CCA 90 bp CAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGTTCTCAGCCAGGTGCTaGAGTCGCTGCAGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: QKHLAGFSLRPLLRGTDGFSARC*SRCRRR
Trigger: CCGGCGCCTGCAGCGACTCCAGCACCTGGCTGAGAA...CCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR TCA 90 bp AAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGATCGGTAGTCCAGCTCATTaGGCTCCTGGGCCAGCGCGG +
Preference number: 4 (lower is better)
Translates to: KHLAGFSLRPLLRGTDGIGSPAH*APGPAR
Trigger: CCGCGCTGGCCCAGGAGCTCAATGAGCTGGACTACC...GATCCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR GCA 90 bp TTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGCCTGAAGCCGGGAACTaGGGGACTCGGGGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: FIQKHLAGFSLRPLLRGTPEAGN*GTRGRR
Trigger: CCGGCGCCCCCGAGTCCCGCAGTTCCCGGCTTCAGG...CGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502692.5
CDS-3UTR GCA 90 bp AAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGATCAGGTGCTGGAGTCGCTaGAGGCGCCGGATCTCCGAG +
Preference number: 4 (lower is better)
Translates to: KHLAGFSLRPLLRGTDGIRCWSR*RRRISE
Trigger: CTCGGAGATCCGGCGCCTGCAGCGACTCCAGCACCT...GATCCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CCA 90 bp CAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGGCATCCCGCCTCTTCTaGGTCAGGGTGCCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: QKHLAGFSLRPLLRGTDGASRLF*VRVPRL
Trigger: CAACCTGGGCACCCTGACCCAGAAGAGGCGGGATGC...CCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CCA 90 bp AAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGATCAGTACTCGGCCTGCTTaGCAGGGAGCTCGCGCCGCA +
Preference number: 4 (lower is better)
Translates to: KHLAGFSLRPLLRGTDGISTRPA*QGARAA
Trigger: TGCGGCGCGAGCTCCCTGCCAAGCAGGCCGAGTACT...GATCCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CCA 90 bp AAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGATCTCTCGATCGGGCTCCTaGCTTCGCTCCGCTCGGCAC +
Preference number: 4 (lower is better)
Translates to: KHLAGFSLRPLLRGTDGISRSGS*LRSARH
Trigger: GTGCCGAGCGGAGCGAAGCCAGGAGCCCGATCGAGA...GATCCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513398.2
CDS-3UTR TCA 90 bp AAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGATCCTCTGGAGCTCCTCGTaGGCCTCTTCCAGCACCTCG +
Preference number: 4 (lower is better)
Translates to: KHLAGFSLRPLLRGTDGILWSSS*ASSSTS
Trigger: CGAGGTGCTGGAAGAGGCTCACGAGGAGCTCCAGAG...GATCCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502692.5
CDS-3UTR TCA 90 bp TTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGCAAGGGGTTGTCCTaGAGCCGGGAACTGCGGGAC +
Preference number: 4 (lower is better)
Translates to: FRSTWLAFLLGPCSEGRMGKGLS*SRELRD
Trigger: GTCCCGCAGTTCCCGGCTTCAGGACAACCCCTTGCC...CATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502692.5
CDS-3UTR GCA 90 bp CAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGGTTGGCAGCTGTCTCTaGCTGCTCAGCCCCGGCAAA +
Preference number: 4 (lower is better)
Translates to: QKHLAGFSLRPLLRGTDGVGSCL*LLSPGK
Trigger: TTTGCCGGGGCTGAGCAGGCAGAGACAGCTGCCAAC...CCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR GCA 90 bp CAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGGCTGCATGGCACTCATaGTGGGCTCACCCACACGGT +
Preference number: 4 (lower is better)
Translates to: QKHLAGFSLRPLLRGTDGAAWHS*WAHPHG
Trigger: ACCGTGTGGGTGAGCCCAGCATGAGTGCCATGCAGC...CCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR GCA 90 bp AAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGATCACCAGCCACACGTCCTaGAGGTCCTCCACGGCACCA +
Preference number: 4 (lower is better)
Translates to: KHLAGFSLRPLLRGTDGITSHTS*RSSTAP
Trigger: TGGTGCCGTGGAGGACCTGCAGGACGTGTGGCTGGT...GATCCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR GCA 90 bp CAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGAGCCTCTCGTTTACCTaGTGCCGTGCCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: QKHLAGFSLRPLLRGTDGSLSFT*CRASSS
Trigger: GGAGGAGCTGGCACGGCAGCAGGTAAACGAGAGGCT...CCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR GCA 90 bp AGGGGCAGAGGACAGCACTCAAACCCTACGACTGGCTCTGGGGGATGTAGGGCATCGTTTTCTTTCCGCTaGTGCTTCTCCCAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: RGRGQHSNPTTGSGGCRASFSFR*CFSQAG
Trigger: CCCGGCCTGGGAGAAGCAGCAGCGGAAAGAAAACGA...TGCCCTACATCCCCCAGAGCCAGTCGTAGGGTTTGAGTGCTGTCCTCTGCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000511191.1
CDS-3UTR CCA 90 bp CAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGAGCTCATTGAGCTCCTaGGCCAGCGCGGCAATGTGC +
Preference number: 4 (lower is better)
Translates to: QKHLAGFSLRPLLRGTDGSSLSS*ASAAMC
Trigger: GCACATTGCCGCGCTGGCCCAGGAGCTCAATGAGCT...CCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CCA 90 bp AAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGATCGCTCCGAGGGACGGATaGGATCAGCCACAGGGTGCA +
Preference number: 4 (lower is better)
Translates to: KHLAGFSLRPLLRGTDGIAPRDG*DQPQGA
Trigger: TGCACCCTGTGGCTGATCCCATCCGTCCCTCGGAGC...GATCCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR TCA 90 bp CAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGAGTTGCACCAGGCAGTaGAGGTCTGGCAAGGGGTTG +
Preference number: 4 (lower is better)
Translates to: QKHLAGFSLRPLLRGTDGSCTRQ*RSGKGL
Trigger: CAACCCCTTGCCAGACCTTCACTGCCTGGTGCAACT...CCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502692.5
CDS-3UTR TCA 90 bp GGACAGCACTCAAACCCTACGACTGGCTCTGGGGGATGTAGGGCACAGTCCTGTTGCCTTGCGCAGGTGTaGGTTGCACCAGGCAGTGAA +
Preference number: 4 (lower is better)
Translates to: GQHSNPTTGSGGCRAQSCCLAQV*VAPGSE
Trigger: TTCACTGCCTGGTGCAACTCACACCTGCGCAAGGCA...ACAGGACTGTGCCCTACATCCCCCAGAGCCAGTCGTAGGGTTTGAGTGCTGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511191.1
CDS-3UTR TCA 90 bp AAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGATCGTTTGGCGTAGTCGATaGGGTCAGGGCGGTGTCGGT +
Preference number: 4 (lower is better)
Translates to: KHLAGFSLRPLLRGTDGIVWRSR*GQGGVG
Trigger: ACCGACACCGCCCTGACCTCATCGACTACGCCAAAC...GATCCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR GCA 90 bp AGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGATCAGTTGGCAGCTGTCTCTaGCTGCTCAGCCCCGGCAAA +
Preference number: 4 (lower is better)
Translates to: STWLAFLLGPCSEGRMGSVGSCL*LLSPGK
Trigger: TTTGCCGGGGCTGAGCAGGCAGAGACAGCTGCCAAC...TGATCCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR GCA 90 bp TTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGAGGTGCTGGAGTCGCTaGAGGCGCCGGATCTCCGAG +
Preference number: 4 (lower is better)
Translates to: LFRSTWLAFLLGPCSEGRRCWSR*RRRISE
Trigger: CTCGGAGATCCGGCGCCTGCAGCGACTCCAGCACCT...CCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR GCA 90 bp AGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGATCAAACTTCTCAGCCAGGTaGTGGAGTCGCTGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: STWLAFLLGPCSEGRMGSNFSAR*WSRCRR
Trigger: GCGCCTGCAGCGACTCCAGCACCTGGCTGAGAAGTT...TGATCCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR GCA 90 bp AGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGATCAAGCCTCTCGTTTACCTaGTGCCGTGCCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: STWLAFLLGPCSEGRMGSSLSFT*CRASSS
Trigger: GGAGGAGCTGGCACGGCAGCAGGTAAACGAGAGGCT...TGATCCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR GCA 90 bp AGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGATCACGTAGCCCAGCCATCTaGTCCTCCAGAGAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: STWLAFLLGPCSEGRMGSRSPAI*SSREPA
Trigger: AGCTGGCTCTCTGGAGGAGCAGATGGCTGGGCTACG...TGATCCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR GCA 90 bp CAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGATGTTCTGCTCCTGCTaGCGTAGCCCAGCCATCTGC +
Preference number: 4 (lower is better)
Translates to: QKHLAGFSLRPLLRGTDGMFCSC*RSPAIC
Trigger: GCAGATGGCTGGGCTACGGCAGCAGGAGCAGAACAT...CCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR GCA 90 bp CAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGCGGAACTCGTTGAGCTaGTCCTGGCTCAGTCCCTTG +
Preference number: 4 (lower is better)
Translates to: QKHLAGFSLRPLLRGTDGRNSLS*SWLSPL
Trigger: CAAGGGACTGAGCCAGGAGCAGCTCAACGAGTTCCG...CCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR GCA 90 bp AGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGATCAGTGAAGGTTTTCCGCTaGTGCTTCTCCCAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: STWLAFLLGPCSEGRMGSVKVFR*CFSQAG
Trigger: CCCGGCCTGGGAGAAGCAGCAGCGGAAAACCTTCAC...TGATCCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513398.2
CDS-3UTR GCA 90 bp CACTCAAACCCTACGACTGGCTCTGGGGGATGTAGGGCACAGTCCTGTCTCCTCGCCACTGACTTGCTGTaGATCCTGGGCCAGTCCCTT +
Preference number: 4 (lower is better)
Translates to: HSNPTTGSGGCRAQSCLLATDLL*ILGQSL
Trigger: AAGGGACTGGCCCAGGATGCACAGCAAGTCAGTGGC...GAGGAGACAGGACTGTGCCCTACATCCCCCAGAGCCAGTCGTAGGGTTTGAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511191.1
CDS-3UTR CCA 90 bp AGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCGGGGGCGCCGGGGTaGATCTCGCGGCGGAGATCC +
Preference number: 4 (lower is better)
Translates to: REGSLFRSTWLAFLLGPCSGAPG*ISRRRS
Trigger: GGATCTCCGCCGCGAGATCCACCCCGGCGCCCCCGA...GCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502692.5
CDS-3UTR CCA 90 bp TTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGCTCTCAAAGGCCTCGTaGCGCCGCAGCAACGCCCGC +
Preference number: 4 (lower is better)
Translates to: FIQKHLAGFSLRPLLRGTLSKAS*RRSNAR
Trigger: GCGGGCGTTGCTGCGGCGCCACGAGGCCTTTGAGAG...CGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CCA 90 bp CAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGCCCACTGATCGCAGATaGCCTGGCAGCGGCTATTCA +
Preference number: 4 (lower is better)
Translates to: QKHLAGFSLRPLLRGTDGPTDRR*PGSGYS
Trigger: TGAATAGCCGCTGCCAGGCCATCTGCGATCAGTGGG...CCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CCA 90 bp TTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGTCCTGCAGCAGCTGGTaGTCACCCTCCAGCCGGTCA +
Preference number: 4 (lower is better)
Translates to: FRSTWLAFLLGPCSEGRMSCSSW*SPSSRS
Trigger: TGACCGGCTGGAGGGTGACCACCAGCTGCTGCAGGA...CATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CCA 90 bp TTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGCTCTCCTGCAGCAGCTaGTGGTCACCCTCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: LFRSTWLAFLLGPCSEGRLSCSS*WSPSSR
Trigger: CCGGCTGGAGGGTGACCACCAGCTGCTGCAGGAGAG...CCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CCA 90 bp AGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGATCACCTGGCTCAGTCCCTTaGCGTCTCGGGTCAGTACCT +
Preference number: 4 (lower is better)
Translates to: STWLAFLLGPCSEGRMGSPGSVP*RLGSVP
Trigger: AGGTACTGACCCGAGACGCCAAGGGACTGAGCCAGG...TGATCCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR TCA 90 bp AGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGATCAGCATGTTTTCTGGGGTaGTGGAGACACCCGGGCATG +
Preference number: 4 (lower is better)
Translates to: STWLAFLLGPCSEGRMGSACFLG*WRHPGM
Trigger: CATGCCCGGGTGTCTCCATCACCCCAGAAAACATGC...TGATCCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502692.5
CDS-3UTR TCA 90 bp TTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGAGCTGGCACTTTTCCTaGATGCGGGGCGGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: FRSTWLAFLLGPCSEGRMSWHFS*MRGGLC
Trigger: GCACAAGCCGCCCCGCATTCAGGAAAAGTGCCAGCT...CATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR TCA 90 bp AGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCCATCCAGCCAGTTGTTaGAGGGCGCGGCCCGCCGGG +
Preference number: 4 (lower is better)
Translates to: REGSLFRSTWLAFLLGPCHPASC*RARPAG
Trigger: CCCGGCGGGCCGCGCCCTTCAACAACTGGCTGGATG...GCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR GCA 90 bp CACTCAAACCCTACGACTGGCTCTGGGGGATGTAGGGCACAGTCCTGTCTCCTCCCCAGACCCTCGGGCTaGATAACCATCATCATCTCG +
Preference number: 4 (lower is better)
Translates to: HSNPTTGSGGCRAQSCLLPRPSG*ITIIIS
Trigger: CGAGATGATGATGGTTATGCAGCCCGAGGGTCTGGG...GAGGAGACAGGACTGTGCCCTACATCCCCCAGAGCCAGTCGTAGGGTTTGAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511191.1
CDS-3UTR CCA 90 bp AAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGATCCTTCCAGCACCTCGCTaGTGGGACACAGAGCCCTAT +
Preference number: 4 (lower is better)
Translates to: KHLAGFSLRPLLRGTDGILPAPR*WDTEPY
Trigger: ATAGGGCTCTGTGTCCCACCAGCGAGGTGCTGGAAG...GATCCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502692.5
CDS-3UTR CCA 90 bp AGGGGCAGAGGACAGCACTCAAACCCTACGACTGGCTCTGGGGGATGTAGGGCACATCTTGCCTTTATCTaGCCTAGGCAGCCTCTCACC +
Preference number: 4 (lower is better)
Translates to: RGRGQHSNPTTGSGGCRAHLAFI*PRQPLT
Trigger: GGTGAGAGGCTGCCTAGGCCAGATAAAGGCAAGATG...TGCCCTACATCCCCCAGAGCCAGTCGTAGGGTTTGAGTGCTGTCCTCTGCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511191.1
CDS-3UTR CCA 90 bp AGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGATCACCCACTGATCGCAGATaGCCTGGCAGCGGCTATTCA +
Preference number: 4 (lower is better)
Translates to: STWLAFLLGPCSEGRMGSPTDRR*PGSGYS
Trigger: TGAATAGCCGCTGCCAGGCCATCTGCGATCAGTGGG...TGATCCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CCA 90 bp CAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGGTTGCAGCCGGTCAATaGTCTCCAGGAGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: QKHLAGFSLRPLLRGTDGVAAGQ*SPGASP
Trigger: TGGAGAAGCTCCTGGAGACCATTGACCGGCTGCAAC...CCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CCA 90 bp AGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGATCAGTGTCTGGTCACAGCTaGGCACCAGCTTTCGGACCA +
Preference number: 4 (lower is better)
Translates to: STWLAFLLGPCSEGRMGSVSGHS*APAFGP
Trigger: TGGTCCGAAAGCTGGTGCCCAGCTGTGACCAGACAC...TGATCCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CCA 90 bp TTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGAGTACTCGGCCTGCTTaGCAGGGAGCTCGCGCCGCA +
Preference number: 4 (lower is better)
Translates to: FIQKHLAGFSLRPLLRGTSTRPA*QGARAA
Trigger: TGCGGCGCGAGCTCCCTGCCAAGCAGGCCGAGTACT...CGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CCA 90 bp CACTCAAACCCTACGACTGGCTCTGGGGGATGTAGGGCACAGTCCTGTCTCCTCACTTGCTGTGCATCCTaGGCCAGTCCCTTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: HSNPTTGSGGCRAQSCLLTCCAS*ASPFPS
Trigger: AGAGGGAAAGGGACTGGCCCAGGATGCACAGCAAGT...GAGGAGACAGGACTGTGCCCTACATCCCCCAGAGCCAGTCGTAGGGTTTGAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511191.1
CDS-3UTR TCA 90 bp TTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGAAGTTCTGCACGTTaGCGTTGCGGTACGGTGCTG +
Preference number: 4 (lower is better)
Translates to: FRSTWLAFLLGPCSEGRMGSSAR*RCGTVL
Trigger: CAGCACCGTACCGCAACGTCAACGTGCAGAACTTCC...CATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR TCA 90 bp GAGAGACCCAGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTACATCCAGCCAGTTGTTaGAGGGCGCGGCCCGCCGGG +
Preference number: 4 (lower is better)
Translates to: ERPREGSLFRSTWLAFLLHPASC*RARPAG
Trigger: CCCGGCGGGCCGCGCCCTTCAACAACTGGCTGGATG...TAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCTGGGTCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513398.2
CDS-3UTR TCA 90 bp TTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGCGGGCAGTGTTGCCTTaGACTGATCGTGCGCTGTCA +
Preference number: 4 (lower is better)
Translates to: FRSTWLAFLLGPCSEGRMRAVLP*TDRALS
Trigger: TGACAGCGCACGATCAGTTCAAGGCAACACTGCCCG...CATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR TCA 90 bp TTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGCACCCTGGATGCCCATaGTGGCACCTCGCTCTCGGT +
Preference number: 4 (lower is better)
Translates to: FIQKHLAGFSLRPLLRGTHPGCP*WHLALG
Trigger: ACCGAGAGCGAGGTGCCATCATGGGCATCCAGGGTG...CGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR GCA 90 bp TTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGAACTTCTCAGCCAGGTaGTGGAGTCGCTGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: LFRSTWLAFLLGPCSEGRNFSAR*WSRCRR
Trigger: GCGCCTGCAGCGACTCCAGCACCTGGCTGAGAAGTT...CCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR GCA 90 bp AGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGATCATCTTCTGGGTCAGGGTaGCCAGGTTGTCCCACTGAT +
Preference number: 4 (lower is better)
Translates to: STWLAFLLGPCSEGRMGSSSGSG*PGCPTD
Trigger: ATCAGTGGGACAACCTGGGCACCCTGACCCAGAAGA...TGATCCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR GCA 90 bp TTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGCGTGCCAGCTCCTCCTaGAGTGTCTGGTCACAGCTG +
Preference number: 4 (lower is better)
Translates to: LFRSTWLAFLLGPCSEGRRASSS*SVWSQL
Trigger: CAGCTGTGACCAGACACTGCAGGAGGAGCTGGCACG...CCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR GCA 90 bp TTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGAACACCAGGCTCTCCTaGAGCAGCTGGTGGTCACCC +
Preference number: 4 (lower is better)
Translates to: LFRSTWLAFLLGPCSEGRNTRLS*SSWWSP
Trigger: GGGTGACCACCAGCTGCTGCAGGAGAGCCTGGTGTT...CCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR GCA 90 bp CAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGCGCGGATGTGCTCCATaGTGTAGACGGTGTGCTTAT +
Preference number: 4 (lower is better)
Translates to: QKHLAGFSLRPLLRGTDGRGCAP*CRRCAY
Trigger: ATAAGCACACCGTCTACAGCATGGAGCACATCCGCG...CCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR GCA 90 bp TTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGGTCACCACCCCAGCTaGGTTGGGGTCCACCATGGT +
Preference number: 4 (lower is better)
Translates to: FIQKHLAGFSLRPLLRGTGHHPS*VGVHHG
Trigger: ACCATGGTGGACCCCAACGCAGCTGGGGTGGTGACC...CGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR GCA 90 bp AGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGATCACCCAGACCCTCGGGCTaGATAACCATCATCATCTCG +
Preference number: 4 (lower is better)
Translates to: STWLAFLLGPCSEGRMGSPRPSG*ITIIIS
Trigger: CGAGATGATGATGGTTATGCAGCCCGAGGGTCTGGG...TGATCCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513398.2
CDS-3UTR CCA 90 bp AGAGGACAGCACTCAAACCCTACGACTGGCTCTGGGGGATGTAGGGCACAGTCCTCCACAGAGATGTCCTaGATGGCGAAGCGAAGGATG +
Preference number: 4 (lower is better)
Translates to: RGQHSNPTTGSGGCRAQSSTEMS*MAKRRM
Trigger: CATCCTTCGCTTCGCCATCCAGGACATCTCTGTGGA...GGACTGTGCCCTACATCCCCCAGAGCCAGTCGTAGGGTTTGAGTGCTGTCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511191.1
CDS-3UTR CCA 90 bp AGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGATCAGGCCATCCTTCCAGCTaGTGTGGAAGTTCTGCACGT +
Preference number: 4 (lower is better)
Translates to: STWLAFLLGPCSEGRMGSGHPSS*CGSSAR
Trigger: ACGTGCAGAACTTCCACACCAGCTGGAAGGATGGCC...TGATCCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CCA 90 bp AGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCGCCCCCGCCAGGCGTTaGCGATGTCCGAGACCAGCT +
Preference number: 4 (lower is better)
Translates to: RGIFIQKHLAGFSLRPLLAPARR*RCPRPA
Trigger: AGCTGGTCTCGGACATCGCCAACGCCTGGCGGGGGC...GAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CCA 90 bp AGACCCAGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCGCCCCCGCCAGGCGTTaGCGATGTCCGAGACCAGCT +
Preference number: 4 (lower is better)
Translates to: RPREGSLFRSTWLAFLLGAPARR*RCPRPA
Trigger: AGCTGGTCTCGGACATCGCCAACGCCTGGCGGGGGC...GCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCTGGGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513398.2
CDS-3UTR CCA 90 bp GAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCTTCTCAGCCAGGTGCTaGAGTCGCTGCAGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: EGSLFRSTWLAFLLGPCSFSARC*SRCRRR
Trigger: CCGGCGCCTGCAGCGACTCCAGCACCTGGCTGAGAA...GGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CCA 90 bp AGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGATCAGTCTGGCAGATCTTCTaGATCTCACCCTGGATGCCC +
Preference number: 4 (lower is better)
Translates to: STWLAFLLGPCSEGRMGSVWQIF*ISPWMP
Trigger: GGGCATCCAGGGTGAGATCCAGAAGATCTGCCAGAC...TGATCCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CCA 90 bp CAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGCGCAGCCCATACGTCTaGCAGATCTTCTGGATCTCA +
Preference number: 4 (lower is better)
Translates to: QKHLAGFSLRPLLRGTDGRSPYV*QIFWIS
Trigger: TGAGATCCAGAAGATCTGCCAGACGTATGGGCTGCG...CCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR TCA 90 bp CAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGCAAGCCTTCCTTGGCTaGGGTTTCTTCCACAGAGAT +
Preference number: 4 (lower is better)
Translates to: QKHLAGFSLRPLLRGTDGQAFLG*GFFHRD
Trigger: ATCTCTGTGGAAGAAACCTCAGCCAAGGAAGGCTTG...CCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR TCA 90 bp TTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGTTTGGCGTAGTCGATaGGGTCAGGGCGGTGTCGGT +
Preference number: 4 (lower is better)
Translates to: FIQKHLAGFSLRPLLRGTVWRSR*GQGGVG
Trigger: ACCGACACCGCCCTGACCTCATCGACTACGCCAAAC...CGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR TCA 90 bp AGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCGGTAGTCCAGCTCATTaGGCTCCTGGGCCAGCGCGG +
Preference number: 4 (lower is better)
Translates to: RGIFIQKHLAGFSLRPLLGSPAH*APGPAR
Trigger: CCGCGCTGGCCCAGGAGCTCAATGAGCTGGACTACC...GAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR TCA 90 bp TTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGCAGCGGCTATTCACTaGGGCTGCCTCGTGGTAGTC +
Preference number: 4 (lower is better)
Translates to: FIQKHLAGFSLRPLLRGTAAAIH*GCLVVV
Trigger: GACTACCACGAGGCAGCCTCAGTGAATAGCCGCTGC...CGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR TCA 90 bp TTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGAGTGTTGCCTTGAACTaGTCGTGCGCTGTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: FRSTWLAFLLGPCSEGRMSVALN*SCAVSR
Trigger: CCTGCTGACAGCGCACGATCAGTTCAAGGCAACACT...CATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR TCA 90 bp TTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGCTCGGAACTCGTTaGGCTGCTCCTGGCTCAGTC +
Preference number: 4 (lower is better)
Translates to: LFRSTWLAFLLGPCSEGRMLGTR*AAPGSV
Trigger: GACTGAGCCAGGAGCAGCTCAACGAGTTCCGAGCAT...CCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR TCA 90 bp GGACAGCACTCAAACCCTACGACTGGCTCTGGGGGATGTAGGGCACAGTCCTGTGTCCCTTTCCCTCTCTaGGCTTTCGTTTTCTTTCCG +
Preference number: 4 (lower is better)
Translates to: GQHSNPTTGSGGCRAQSCVPFPL*AFVFFP
Trigger: CGGAAAGAAAACGAAAGCTCAGAGAGGGAAAGGGAC...ACAGGACTGTGCCCTACATCCCCCAGAGCCAGTCGTAGGGTTTGAGTGCTGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511191.1
CDS-3UTR GCA 90 bp CAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGGAAAGTCCTCTAGTTTaGGCTGCATGGCACTCATGC +
Preference number: 4 (lower is better)
Translates to: QKHLAGFSLRPLLRGTDGESPLV*AAWHSC
Trigger: GCATGAGTGCCATGCAGCGCAAACTAGAGGACTTTC...CCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR GCA 90 bp AAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGATCATAATGTTCTGCTCCTaGTGCCGTAGCCCAGCCATC +
Preference number: 4 (lower is better)
Translates to: KHLAGFSLRPLLRGTDGIIMFCS*CRSPAI
Trigger: GATGGCTGGGCTACGGCAGCAGGAGCAGAACATTAT...GATCCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR GCA 90 bp TTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGATCAGCCACAGGGTaGATCCTCTCTCCATCTTGC +
Preference number: 4 (lower is better)
Translates to: FRSTWLAFLLGPCSEGRMGSATG*ILSPSC
Trigger: GCAAGATGGAGAGAGGATGCACCCTGTGGCTGATCC...CATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CCA 90 bp AGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCGGAGACACCCGGGCATaGGGAACGGCTCTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: REGSLFRSTWLAFLLGPCGDTRA*GTALSQ
Trigger: CTGGCTCAGAGCCGTTCCCCATGCCCGGGTGTCTCC...GCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502692.5
CDS-3UTR CCA 90 bp AAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGATCCATCTTGCCTTTATCTaGCCTAGGCAGCCTCTCACC +
Preference number: 4 (lower is better)
Translates to: KHLAGFSLRPLLRGTDGIHLAFI*PRQPLT
Trigger: GGTGAGAGGCTGCCTAGGCCAGATAAAGGCAAGATG...GATCCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CCA 90 bp GAGAGACCCAGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTACTCTCAAAGGCCTCGTaGCGCCGCAGCAACGCCCGC +
Preference number: 4 (lower is better)
Translates to: ERPREGSLFRSTWLAFLLLSKAS*RRSNAR
Trigger: GCGGGCGTTGCTGCGGCGCCACGAGGCCTTTGAGAG...TAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCTGGGTCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513398.2
CDS-3UTR CCA 90 bp TTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGGCTGTCAGCAGGCTCTaGGTCTCCTCCACAGAGTGT +
Preference number: 4 (lower is better)
Translates to: LFRSTWLAFLLGPCSEGRAVSRL*VSSTEC
Trigger: ACACTCTGTGGAGGAGACCCAGAGCCTGCTGACAGC...CCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CCA 90 bp AGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCCTCTCCTGCAGCAGCTaGTGGTCACCCTCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: REGSLFRSTWLAFLLGPCLSCSS*WSPSSR
Trigger: CCGGCTGGAGGGTGACCACCAGCTGCTGCAGGAGAG...GCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CCA 90 bp TTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGCCTGGCTCAGTCCCTTaGCGTCTCGGGTCAGTACCT +
Preference number: 4 (lower is better)
Translates to: FIQKHLAGFSLRPLLRGTPGSVP*RLGSVP
Trigger: AGGTACTGACCCGAGACGCCAAGGGACTGAGCCAGG...CGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CCA 90 bp AGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGATCAAAGTCTATGAAGGCCTaGAAGGTCACCACCCCAGCT +
Preference number: 4 (lower is better)
Translates to: STWLAFLLGPCSEGRMGSKSMKA*KVTTPA
Trigger: AGCTGGGGTGGTGACCTTCCAGGCCTTCATAGACTT...TGATCCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CCA 90 bp TTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGCCCCATAGAGGGCACTaGAGAAGGCCACGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: LFRSTWLAFLLGPCSEGRPHRGH*RRPRSP
Trigger: TGGACTACGTGGCCTTCTCCAGTGCCCTCTATGGGG...CCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR TCA 90 bp AGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCCCAGGTTGTCCCACTaGTCGCAGATGGCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: RGIFIQKHLAGFSLRPLLPRLSH*SQMAWQ
Trigger: CTGCCAGGCCATCTGCGATCAGTGGGACAACCTGGG...GAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR TCA 90 bp AGACCCAGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCACCCTGGATGCCCATaGTGGCACCTCGCTCTCGGT +
Preference number: 4 (lower is better)
Translates to: RPREGSLFRSTWLAFLLGHPGCP*WHLALG
Trigger: ACCGAGAGCGAGGTGCCATCATGGGCATCCAGGGTG...GCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCTGGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513398.2
CDS-3UTR GCA 90 bp TTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGTCCTCTAGTTTGCGCTaGATGGCACTCATGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LFRSTWLAFLLGPCSEGRSSSLR*MALMLG
Trigger: GCCCAGCATGAGTGCCATGCAGCGCAAACTAGAGGA...CCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR GCA 90 bp AGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCACCAGCCACACGTCCTaGAGGTCCTCCACGGCACCA +
Preference number: 4 (lower is better)
Translates to: REGSLFRSTWLAFLLGPCTSHTS*RSSTAP
Trigger: TGGTGCCGTGGAGGACCTGCAGGACGTGTGGCTGGT...GCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR GCA 90 bp TGGGGAGAGACCCAGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCGTAGCCCAGCCATCTaGTCCTCCAGAGAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: WGETQRGIFIQKHLAGFSRSPAI*SSREPA
Trigger: AGCTGGCTCTCTGGAGGAGCAGATGGCTGGGCTACG...AGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCTGGGTCTCTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513398.2
CDS-3UTR GCA 90 bp GAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCAACACCAGGCTCTCCTaGAGCAGCTGGTGGTCACCC +
Preference number: 4 (lower is better)
Translates to: EGSLFRSTWLAFLLGPCSNTRLS*SSWWSP
Trigger: GGGTGACCACCAGCTGCTGCAGGAGAGCCTGGTGTT...GGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR GCA 90 bp CAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGAAAGTGGTTGAAGGATaGTCGGAACTCGTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: QKHLAGFSLRPLLRGTDGKVVEG*SELVEL
Trigger: CAGCTCAACGAGTTCCGAGCATCCTTCAACCACTTT...CCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR GCA 90 bp AGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCGGTCACCACCCCAGCTaGGTTGGGGTCCACCATGGT +
Preference number: 4 (lower is better)
Translates to: REGSLFRSTWLAFLLGPCGHHPS*VGVHHG
Trigger: ACCATGGTGGACCCCAACGCAGCTGGGGTGGTGACC...GCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR GCA 90 bp CAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGAAGGAAGCTACAACTTaGTCAGTCGTGTCAGTCTCG +
Preference number: 4 (lower is better)
Translates to: QKHLAGFSLRPLLRGTDGKEATT*SVVSVS
Trigger: CGAGACTGACACGACTGAGCAAGTTGTAGCTTCCTT...CCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR GCA 90 bp TTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGTTTCTCTTAGGCCCTTaGTCCGAGGGACGGATGGGA +
Preference number: 4 (lower is better)
Translates to: LFRSTWLAFLLGPCSEGRFLLGP*SEGRMG
Trigger: TCCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAA...CCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CCA 90 bp AGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGATCAGTTTTGCATGTTTTCTaGGGTGATGGAGACACCCGG +
Preference number: 4 (lower is better)
Translates to: STWLAFLLGPCSEGRMGSVLHVF*GDGDTR
Trigger: CCGGGTGTCTCCATCACCCCAGAAAACATGCAAAAC...TGATCCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502692.5
CDS-3UTR CCA 90 bp AGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCCAGCACCTCGCTGGTaGGACACAGAGCCCTATCCC +
Preference number: 4 (lower is better)
Translates to: RGIFIQKHLAGFSLRPLLPAPRW*DTEPYP
Trigger: GGGATAGGGCTCTGTGTCCCACCAGCGAGGTGCTGG...GAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502692.5
CDS-3UTR CCA 90 bp TTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGCATCTTGCCTTTATCTaGCCTAGGCAGCCTCTCACC +
Preference number: 4 (lower is better)
Translates to: FRSTWLAFLLGPCSEGRMHLAFI*PRQPLT
Trigger: GGTGAGAGGCTGCCTAGGCCAGATAAAGGCAAGATG...CATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CCA 90 bp AGGGGCAGAGGACAGCACTCAAACCCTACGACTGGCTCTGGGGGATGTAGGGCAACGTTGGCGATTTTGTaGAAGCGCATCTTGCCTTTA +
Preference number: 4 (lower is better)
Translates to: RGRGQHSNPTTGSGGCRATLAIL*KRILPL
Trigger: TAAAGGCAAGATGCGCTTCCACAAAATCGCCAACGT...TGCCCTACATCCCCCAGAGCCAGTCGTAGGGTTTGAGTGCTGTCCTCTGCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000511191.1
CDS-3UTR CCA 90 bp TTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGTCCACAGAGATGTCCTaGATGGCGAAGCGAAGGATG +
Preference number: 4 (lower is better)
Translates to: FRSTWLAFLLGPCSEGRMSTEMS*MAKRRM
Trigger: CATCCTTCGCTTCGCCATCCAGGACATCTCTGTGGA...CATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CCA 90 bp CAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGCTTCTCATCCGGCTTTaGGGTGTTCACAATGTCTTC +
Preference number: 4 (lower is better)
Translates to: QKHLAGFSLRPLLRGTDGLLIRL*GVHNVF
Trigger: GAAGACATTGTGAACACCCCAAAGCCGGATGAGAAG...CCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CCA 90 bp AGACCCAGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCGCATCCCGCCTCTTCTaGGTCAGGGTGCCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: RPREGSLFRSTWLAFLLGASRLF*VRVPRL
Trigger: CAACCTGGGCACCCTGACCCAGAAGAGGCGGGATGC...GCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCTGGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513398.2
CDS-3UTR CCA 90 bp GAGACCCAGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGTCCTGCAGCAGCTGGTaGTCACCCTCCAGCCGGTCA +
Preference number: 4 (lower is better)
Translates to: ETQRGIFIQKHLAGFSLRSCSSW*SPSSRS
Trigger: TGACCGGCTGGAGGGTGACCACCAGCTGCTGCAGGA...CCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCTGGGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513398.2
CDS-3UTR CCA 90 bp AGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCGCTCCGAGGGACGGATaGGATCAGCCACAGGGTGCA +
Preference number: 4 (lower is better)
Translates to: RGIFIQKHLAGFSLRPLLAPRDG*DQPQGA
Trigger: TGCACCCTGTGGCTGATCCCATCCGTCCCTCGGAGC...GAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
3UTR CAA 72 bp GGAGAGACCCAGAGAGGGATCTTTATTCAGAAGCACTaGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: GETQRGIFIQKH*AGFSLRPLLRG
Trigger: CCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCTGGGTCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513398.2
CDS-3UTR TCA 90 bp AGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCGCAGCGGCTATTCACTaGGGCTGCCTCGTGGTAGTC +
Preference number: 4 (lower is better)
Translates to: REGSLFRSTWLAFLLGPCAAAIH*GCLVVV
Trigger: GACTACCACGAGGCAGCCTCAGTGAATAGCCGCTGC...GCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR TCA 90 bp TGGGGAGAGACCCAGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCGGGCAGTGTTGCCTTaGACTGATCGTGCGCTGTCA +
Preference number: 4 (lower is better)
Translates to: WGETQRGIFIQKHLAGFSRAVLP*TDRALS
Trigger: TGACAGCGCACGATCAGTTCAAGGCAACACTGCCCG...AGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCTGGGTCTCTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513398.2
CDS-3UTR TCA 90 bp TGGGGAGAGACCCAGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTATGCTCGGAACTCGTTaGGCTGCTCCTGGCTCAGTC +
Preference number: 4 (lower is better)
Translates to: WGETQRGIFIQKHLAGFSMLGTR*AAPGSV
Trigger: GACTGAGCCAGGAGCAGCTCAACGAGTTCCGAGCAT...AGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCTGGGTCTCTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513398.2
CDS-3UTR TCA 90 bp AGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGATCACTCCTGCCAAGATCTTaGAGGAAGCTACAACTTGCT +
Preference number: 4 (lower is better)
Translates to: STWLAFLLGPCSEGRMGSLLPRS*RKLQLA
Trigger: AGCAAGTTGTAGCTTCCTTCAAGATCTTGGCAGGAG...TGATCCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR GCA 90 bp TTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGTTTTCCTGGTTCACTaGCAGCACCTTGCAGATCCT +
Preference number: 4 (lower is better)
Translates to: FRSTWLAFLLGPCSEGRMVFLVH*QHLADP
Trigger: AGGATCTGCAAGGTGCTGGCAGTGAACCAGGAAAAC...CATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR GCA 90 bp AGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCGCTGCATGGCACTCATaGTGGGCTCACCCACACGGT +
Preference number: 4 (lower is better)
Translates to: REGSLFRSTWLAFLLGPCAAWHS*WAHPHG
Trigger: ACCGTGTGGGTGAGCCCAGCATGAGTGCCATGCAGC...GCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR GCA 90 bp TTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGTCCTCTAGTTTGCGCTaGATGGCACTCATGCTGGGC +
Preference number: 4 (lower is better)
Translates to: FIQKHLAGFSLRPLLRGTSSSLR*MALMLG
Trigger: GCCCAGCATGAGTGCCATGCAGCGCAAACTAGAGGA...CGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR GCA 90 bp AGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCCGTGCCAGCTCCTCCTaGAGTGTCTGGTCACAGCTG +
Preference number: 4 (lower is better)
Translates to: REGSLFRSTWLAFLLGPCRASSS*SVWSQL
Trigger: CAGCTGTGACCAGACACTGCAGGAGGAGCTGGCACG...GCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR GCA 90 bp GAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCATGTTCTGCTCCTGCTaGCGTAGCCCAGCCATCTGC +
Preference number: 4 (lower is better)
Translates to: EGSLFRSTWLAFLLGPCSMFCSC*RSPAIC
Trigger: GCAGATGGCTGGGCTACGGCAGCAGGAGCAGAACAT...GGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CCA 90 bp TTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGAGCTTCTCGTTTTCCTaGTTCACTGCCAGCACCTTG +
Preference number: 4 (lower is better)
Translates to: FRSTWLAFLLGPCSEGRMSFSFS*FTASTL
Trigger: CAAGGTGCTGGCAGTGAACCAGGAAAACGAGAAGCT...CATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CCA 90 bp TTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGACTCCAGCAGCTCACTaGCAAGCTTCTCATACTCCT +
Preference number: 4 (lower is better)
Translates to: FRSTWLAFLLGPCSEGRMTPAAH*QASHTP
Trigger: AGGAGTATGAGAAGCTTGCCAGTGAGCTGCTGGAGT...CATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CCA 90 bp TGGGGAGAGACCCAGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTGCATGGCACTCATGCTaGGCTCACCCACACGGTTCT +
Preference number: 4 (lower is better)
Translates to: WGETQRGIFIQKHLAGFSAWHSC*AHPHGS
Trigger: AGAACCGTGTGGGTGAGCCCAGCATGAGTGCCATGC...AGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCTGGGTCTCTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513398.2
CDS-3UTR CCA 90 bp TTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGTTCTGGATCTCACCCTaGATGCCCATGATGGCACCT +
Preference number: 4 (lower is better)
Translates to: LFRSTWLAFLLGPCSEGRFWISP*MPMMAP
Trigger: AGGTGCCATCATGGGCATCCAGGGTGAGATCCAGAA...CCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CCA 90 bp GAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCTCGTTGAGCTGCTCCTaGCTCAGTCCCTTGGCGTCT +
Preference number: 4 (lower is better)
Translates to: EGSLFRSTWLAFLLGPCSSLSCS*LSPLAS
Trigger: AGACGCCAAGGGACTGAGCCAGGAGCAGCTCAACGA...GGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR TCA 90 bp AGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCTGCCTTGCGCAGGTGTaGGTTGCACCAGGCAGTGAA +
Preference number: 4 (lower is better)
Translates to: RGIFIQKHLAGFSLRPLLCLAQV*VAPGSE
Trigger: TTCACTGCCTGGTGCAACTCACACCTGCGCAAGGCA...GAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR TCA 90 bp GAGACCCAGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGTGCCTTGCGCAGGTGTaGGTTGCACCAGGCAGTGAA +
Preference number: 4 (lower is better)
Translates to: ETQRGIFIQKHLAGFSLRCLAQV*VAPGSE
Trigger: TTCACTGCCTGGTGCAACTCACACCTGCGCAAGGCA...CCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCTGGGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513398.2
CDS-3UTR TCA 90 bp TCCTGTCTCCTCAGTCAGGGTAGGTCTCAGAGCCTTGTATTTCTGGATTCAAGTAGTTGCACCAGGCAGTaGAGGTCTAGGGGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: SCLLSQGRSQSLVFLDSSSCTRQ*RSRGRG
Trigger: TCCTCTGCCCCTAGACCTTCACTGCCTGGTGCAACT...ACTTGAATCCAGAAATACAAGGCTCTGAGACCTACCCTGACTGAGGAGACAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511191.1
CDS-3UTR GCA 90 bp AGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCGACGTTGCGGTACGGTaGTGTCTTCCTCTGGCACCA +
Preference number: 4 (lower is better)
Translates to: REGSLFRSTWLAFLLGPCDVAVR*CLPLAP
Trigger: TGGTGCCAGAGGAAGACAGCACCGTACCGCAACGTC...GCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR GCA 90 bp AGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCGACGTTGCGGTACGGTaGTGTCTTCCTCTGGCACCA +
Preference number: 4 (lower is better)
Translates to: RGIFIQKHLAGFSLRPLLDVAVR*CLPLAP
Trigger: TGGTGCCAGAGGAAGACAGCACCGTACCGCAACGTC...GAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR GCA 90 bp CAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGGTTCACAATGTCTTCTaGATCCAACATCTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: QKHLAGFSLRPLLRGTDGVHNVF*IQHLGD
Trigger: ATCCCCAAGATGTTGGATGCAGAAGACATTGTGAAC...CCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR GCA 90 bp TGGGGAGAGACCCAGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTTCTTCTGGGTCAGGGTaGCCAGGTTGTCCCACTGAT +
Preference number: 4 (lower is better)
Translates to: WGETQRGIFIQKHLAGFSSSGSG*PGCPTD
Trigger: ATCAGTGGGACAACCTGGGCACCCTGACCCAGAAGA...AGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCTGGGTCTCTCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513398.2
CDS-3UTR GCA 90 bp AGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCCGGAACTCGTTGAGCTaGTCCTGGCTCAGTCCCTTG +
Preference number: 4 (lower is better)
Translates to: REGSLFRSTWLAFLLGPCRNSLS*SWLSPL
Trigger: CAAGGGACTGAGCCAGGAGCAGCTCAACGAGTTCCG...GCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CCA 90 bp TTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGGAAGCAAGCCTTCCTTaGCTGAGGTTTCTTCCACAG +
Preference number: 4 (lower is better)
Translates to: LFRSTWLAFLLGPCSEGREASLP*LRFLPQ
Trigger: CTGTGGAAGAAACCTCAGCCAAGGAAGGCTTGCTTC...CCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CCA 90 bp GAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGGCCATCCTTCCAGCTaGTGTGGAAGTTCTGCACGT +
Preference number: 4 (lower is better)
Translates to: EGSLFRSTWLAFLLGPCSGHPSS*CGSSAR
Trigger: ACGTGCAGAACTTCCACACCAGCTGGAAGGATGGCC...GGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CCA 90 bp TTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGACTCCAGCAGCTCACTaGCAAGCTTCTCATACTCCT +
Preference number: 4 (lower is better)
Translates to: LFRSTWLAFLLGPCSEGRTPAAH*QASHTP
Trigger: AGGAGTATGAGAAGCTTGCCAGTGAGCTGCTGGAGT...CCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CCA 90 bp AGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCGCATGGCACTCATGCTaGGCTCACCCACACGGTTCT +
Preference number: 4 (lower is better)
Translates to: RGIFIQKHLAGFSLRPLLAWHSC*AHPHGS
Trigger: AGAACCGTGTGGGTGAGCCCAGCATGAGTGCCATGC...GAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CCA 90 bp AGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCGCTGTCAGCAGGCTCTaGGTCTCCTCCACAGAGTGT +
Preference number: 4 (lower is better)
Translates to: RGIFIQKHLAGFSLRPLLAVSRL*VSSTEC
Trigger: ACACTCTGTGGAGGAGACCCAGAGCCTGCTGACAGC...GAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CCA 90 bp AGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCGTGTCTGGTCACAGCTaGGCACCAGCTTTCGGACCA +
Preference number: 4 (lower is better)
Translates to: REGSLFRSTWLAFLLGPCVSGHS*APAFGP
Trigger: TGGTCCGAAAGCTGGTGCCCAGCTGTGACCAGACAC...GCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CCA 90 bp TTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGTCTCGGGTCAGTACCTaGTTCTCCACTTCATTGATG +
Preference number: 4 (lower is better)
Translates to: FRSTWLAFLLGPCSEGRMSRVST*FSTSLM
Trigger: CATCAATGAAGTGGAGAACCAGGTACTGACCCGAGA...CATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CCA 90 bp AGACCCAGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCCCATAGAGGGCACTaGAGAAGGCCACGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: RPREGSLFRSTWLAFLLGPHRGH*RRPRSP
Trigger: TGGACTACGTGGCCTTCTCCAGTGCCCTCTATGGGG...GCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCTGGGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513398.2
CDS-3UTR CCA 90 bp GAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGAACCTCAGTGGTTaGGGTCAAAGGTCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: EGSLFRSTWLAFLLGPCSENLSG*GQRSLS
Trigger: GGAGAGCGACCTTTGACCCCAACCACTGAGGTTCTC...GGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CCA 90 bp GCAGAGGACAGCACTCAAACCCTACGACTGGCTCTGGGGGATGTAGGGCACAGTAGAGCCTTGTATTTCTaGATTCAAGTCTCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: AEDSTQTLRLALGDVGHSRALYF*IQVSAQ
Trigger: CTGAGCTGAGACTTGAATCCAGAAATACAAGGCTCT...ACTGTGCCCTACATCCCCCAGAGCCAGTCGTAGGGTTTGAGTGCTGTCCTCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511191.1
CDS-3UTR TCA 90 bp AGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCACGGGACCTCTCTaGGTCTGTTTACTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: REGSLFRSTWLAFLLGPCSTGPL*VCLLLS
Trigger: GGAGAGGAGTAAACAGACTCAGAGAGGTCCCGTGGA...GCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502692.5
CDS-3UTR TCA 90 bp TTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGCAAGCCTTCCTTGGCTaGGGTTTCTTCCACAGAGAT +
Preference number: 4 (lower is better)
Translates to: FIQKHLAGFSLRPLLRGTQAFLG*GFFHRD
Trigger: ATCTCTGTGGAAGAAACCTCAGCCAAGGAAGGCTTG...CGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR TCA 90 bp GAGAGACCCAGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGAAGTTCTGCACGTTaGCGTTGCGGTACGGTGCTG +
Preference number: 4 (lower is better)
Translates to: ERPREGSLFRSTWLAFLLGSSAR*RCGTVL
Trigger: CAGCACCGTACCGCAACGTCAACGTGCAGAACTTCC...TAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCTGGGTCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513398.2
CDS-3UTR TCA 90 bp AGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCAGTGTTGCCTTGAACTaGTCGTGCGCTGTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: REGSLFRSTWLAFLLGPCSVALN*SCAVSR
Trigger: CCTGCTGACAGCGCACGATCAGTTCAAGGCAACACT...GCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR TCA 90 bp TTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGCTCCTGCCAAGATCTTaGAGGAAGCTACAACTTGCT +
Preference number: 4 (lower is better)
Translates to: LFRSTWLAFLLGPCSEGRLLPRS*RKLQLA
Trigger: AGCAAGTTGTAGCTTCCTTCAAGATCTTGGCAGGAG...CCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR TCA 90 bp AGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCAGTTGCACCAGGCAGTaGAGGTTTTCCGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: REGSLFRSTWLAFLLGPCSCTRQ*RFSAAA
Trigger: AGCAGCAGCGGAAAACCTTCACTGCCTGGTGCAACT...GCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513398.2
CDS-3UTR GCA 90 bp AGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCGGATCAGCCACAGGGTaGATCCTCTCTCCATCTTGC +
Preference number: 4 (lower is better)
Translates to: RGIFIQKHLAGFSLRPLLGSATG*ILSPSC
Trigger: GCAAGATGGAGAGAGGATGCACCCTGTGGCTGATCC...GAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CCA 90 bp AGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCAGGCAGTGAAGGTCTaGCAAGGGGTTGTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: RGIFIQKHLAGFSLRPLLQAVKV*QGVVLK
Trigger: CTTCAGGACAACCCCTTGCCAGACCTTCACTGCCTG...GAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502692.5
CDS-3UTR CCA 90 bp GAGACCCAGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGGTTGCAGCCGGTCAATaGTCTCCAGGAGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: ETQRGIFIQKHLAGFSLRVAAGQ*SPGASP
Trigger: TGGAGAAGCTCCTGGAGACCATTGACCGGCTGCAAC...CCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCTGGGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513398.2
CDS-3UTR CCA 90 bp AGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCGTCTGGCAGATCTTCTaGATCTCACCCTGGATGCCC +
Preference number: 4 (lower is better)
Translates to: RGIFIQKHLAGFSLRPLLVWQIF*ISPWMP
Trigger: GGGCATCCAGGGTGAGATCCAGAAGATCTGCCAGAC...GAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CCA 90 bp GAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCCGCAGCCCATACGTCTaGCAGATCTTCTGGATCTCA +
Preference number: 4 (lower is better)
Translates to: EGSLFRSTWLAFLLGPCSRSPYV*QIFWIS
Trigger: TGAGATCCAGAAGATCTGCCAGACGTATGGGCTGCG...GGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CCA 90 bp GAGAGACCCAGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTATCGTTGAGCTGCTCCTaGCTCAGTCCCTTGGCGTCT +
Preference number: 4 (lower is better)
Translates to: ERPREGSLFRSTWLAFLLSLSCS*LSPLAS
Trigger: AGACGCCAAGGGACTGAGCCAGGAGCAGCTCAACGA...TAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCTGGGTCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513398.2
CDS-3UTR CCA 90 bp AGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCGAGAACCTCAGTGGTTaGGGTCAAAGGTCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: RGIFIQKHLAGFSLRPLLENLSG*GQRSLS
Trigger: GGAGAGCGACCTTTGACCCCAACCACTGAGGTTCTC...GAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR GCA 90 bp GAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGTTTTCCTGGTTCACTaGCAGCACCTTGCAGATCCT +
Preference number: 4 (lower is better)
Translates to: EGSLFRSTWLAFLLGPCSVFLVH*QHLADP
Trigger: AGGATCTGCAAGGTGCTGGCAGTGAACCAGGAAAAC...GGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR GCA 90 bp GAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAAAGTCCTCTAGTTTaGGCTGCATGGCACTCATGC +
Preference number: 4 (lower is better)
Translates to: EGSLFRSTWLAFLLGPCSESPLV*AAWHSC
Trigger: GCATGAGTGCCATGCAGCGCAAACTAGAGGACTTTC...GGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR GCA 90 bp AGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCATAATGTTCTGCTCCTaGTGCCGTAGCCCAGCCATC +
Preference number: 4 (lower is better)
Translates to: REGSLFRSTWLAFLLGPCIMFCS*CRSPAI
Trigger: GATGGCTGGGCTACGGCAGCAGGAGCAGAACATTAT...GCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CCA 90 bp TTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGACGTTGGCGATTTTGTaGAAGCGCATCTTGCCTTTA +
Preference number: 4 (lower is better)
Translates to: LFRSTWLAFLLGPCSEGRTLAIL*KRILPL
Trigger: TAAAGGCAAGATGCGCTTCCACAAAATCGCCAACGT...CCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CCA 90 bp AGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCTCCACAGAGATGTCCTaGATGGCGAAGCGAAGGATG +
Preference number: 4 (lower is better)
Translates to: RGIFIQKHLAGFSLRPLLSTEMS*MAKRRM
Trigger: CATCCTTCGCTTCGCCATCCAGGACATCTCTGTGGA...GAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CCA 90 bp AGACCCAGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCAAGTCTATGAAGGCCTaGAAGGTCACCACCCCAGCT +
Preference number: 4 (lower is better)
Translates to: RPREGSLFRSTWLAFLLGKSMKA*KVTTPA
Trigger: AGCTGGGGTGGTGACCTTCCAGGCCTTCATAGACTT...GCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCTGGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513398.2
CDS-3UTR TCA 90 bp TCCTGTCTCCTCAGTCAGGGTAGGTCTCAGAGCCTTGTATTTCTGGATTCAAGTCAAGCCTTCCTTGGCTaGGGTTTCTTCCACAGAGAT +
Preference number: 4 (lower is better)
Translates to: SCLLSQGRSQSLVFLDSSQAFLG*GFFHRD
Trigger: ATCTCTGTGGAAGAAACCTCAGCCAAGGAAGGCTTG...ACTTGAATCCAGAAATACAAGGCTCTGAGACCTACCCTGACTGAGGAGACAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511191.1
CDS-3UTR GCA 90 bp GAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGTCCAGGTATTTCTCTaGCACCTCAAAGGCAGTGTT +
Preference number: 4 (lower is better)
Translates to: EGSLFRSTWLAFLLGPCSVQVFL*HLKGSV
Trigger: AACACTGCCTTTGAGGTGGCAGAGAAATACCTGGAC...GGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR GCA 90 bp TTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGTCCATCATCCCATTCTaGTTCCTGTCAAAGTGGTTG +
Preference number: 4 (lower is better)
Translates to: FIQKHLAGFSLRPLLRGTSIIPF*FLSKWL
Trigger: CAACCACTTTGACAGGAAGCAGAATGGGATGATGGA...CGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CCA 90 bp AGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCGAAGCAAGCCTTCCTTaGCTGAGGTTTCTTCCACAG +
Preference number: 4 (lower is better)
Translates to: REGSLFRSTWLAFLLGPCEASLP*LRFLPQ
Trigger: CTGTGGAAGAAACCTCAGCCAAGGAAGGCTTGCTTC...GCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CCA 90 bp GAGAGACCCAGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTATTCTGGATCTCACCCTaGATGCCCATGATGGCACCT +
Preference number: 4 (lower is better)
Translates to: ERPREGSLFRSTWLAFLLFWISP*MPMMAP
Trigger: AGGTGCCATCATGGGCATCCAGGGTGAGATCCAGAA...TAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCTGGGTCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513398.2
CDS-3UTR CCA 90 bp AGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCCATAGAGAACCTCAGTaGTTGGGGTCAAAGGTCGCT +
Preference number: 4 (lower is better)
Translates to: REGSLFRSTWLAFLLGPCHREPQ*LGSKVA
Trigger: AGCGACCTTTGACCCCAACCACTGAGGTTCTCTATG...GCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR GCA 90 bp AGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCAAAGTGGTTGAAGGATaGTCGGAACTCGTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: RGIFIQKHLAGFSLRPLLKVVEG*SELVEL
Trigger: CAGCTCAACGAGTTCCGAGCATCCTTCAACCACTTT...GAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR GCA 90 bp AGACCCAGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCAAGGAAGCTACAACTTaGTCAGTCGTGTCAGTCTCG +
Preference number: 4 (lower is better)
Translates to: RPREGSLFRSTWLAFLLGKEATT*SVVSVS
Trigger: CGAGACTGACACGACTGAGCAAGTTGTAGCTTCCTT...GCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCTGGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513398.2
CDS-3UTR CCA 90 bp GAGACCCAGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGTCTCGGGTCAGTACCTaGTTCTCCACTTCATTGATG +
Preference number: 4 (lower is better)
Translates to: ETQRGIFIQKHLAGFSLRSRVST*FSTSLM
Trigger: CATCAATGAAGTGGAGAACCAGGTACTGACCCGAGA...CCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCTGGGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513398.2
CDS-3UTR GCA 90 bp GAGAGACCCAGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGTCCAGGTATTTCTCTaGCACCTCAAAGGCAGTGTT +
Preference number: 4 (lower is better)
Translates to: ERPREGSLFRSTWLAFLLVQVFL*HLKGSV
Trigger: AACACTGCCTTTGAGGTGGCAGAGAAATACCTGGAC...TAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCTGGGTCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513398.2
CDS-3UTR GCA 90 bp AGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCGTAGTTCTTGTCTCCTaGCAAGATCTTGAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: RGIFIQKHLAGFSLRPLLVVLVS*QDLEGS
Trigger: GCTTCCTTCAAGATCTTGGCAGGAGACAAGAACTAC...GAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR GCA 90 bp AGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCGTAGTTCTTGTCTCCTaGCAAGATCTTGAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: REGSLFRSTWLAFLLGPCVVLVS*QDLEGS
Trigger: GCTTCCTTCAAGATCTTGGCAGGAGACAAGAACTAC...GCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CCA 90 bp GAGACCCAGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGACGTTGGCGATTTTGTaGAAGCGCATCTTGCCTTTA +
Preference number: 4 (lower is better)
Translates to: ETQRGIFIQKHLAGFSLRTLAIL*KRILPL
Trigger: TAAAGGCAAGATGCGCTTCCACAAAATCGCCAACGT...CCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCTGGGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513398.2
CDS-3UTR GCA 90 bp GAGAGACCCAGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTATCCATCATCCCATTCTaGTTCCTGTCAAAGTGGTTG +
Preference number: 4 (lower is better)
Translates to: ERPREGSLFRSTWLAFLLSIIPF*FLSKWL
Trigger: CAACCACTTTGACAGGAAGCAGAATGGGATGATGGA...TAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCTGGGTCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513398.2
CDS-3UTR GCA 90 bp GAGAGACCCAGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGTTCACAATGTCTTCTaGATCCAACATCTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: ERPREGSLFRSTWLAFLLVHNVF*IQHLGD
Trigger: ATCCCCAAGATGTTGGATGCAGAAGACATTGTGAAC...TAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCTGGGTCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513398.2
CDS-3UTR CAA 90 bp CAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGCCATCCAGCCAGTTGTaGAAGGGCGCGGCCCGCCGG +
Preference number: 5 (lower is better)
Translates to: QKHLAGFSLRPLLRGTDGPSSQL*KGAARR
Trigger: CCGGCGGGCCGCGCCCTTCAACAACTGGCTGGATGG...CCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CAA 90 bp AAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGATCAGCCCCCGCCAGGCGTaGGCGATGTCCGAGACCAGC +
Preference number: 5 (lower is better)
Translates to: KHLAGFSLRPLLRGTDGISPRQA*AMSETS
Trigger: GCTGGTCTCGGACATCGCCAACGCCTGGCGGGGGCT...GATCCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CAA 90 bp AGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGATCACCATCCAGCCAGTTGTaGAAGGGCGCGGCCCGCCGG +
Preference number: 5 (lower is better)
Translates to: STWLAFLLGPCSEGRMGSPSSQL*KGAARR
Trigger: CCGGCGGGCCGCGCCCTTCAACAACTGGCTGGATGG...TGATCCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CAA 90 bp AAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGATCCAGTACTCGGCCTGCTaGGCAGGGAGCTCGCGCCGC +
Preference number: 5 (lower is better)
Translates to: KHLAGFSLRPLLRGTDGIQYSAC*AGSSRR
Trigger: GCGGCGCGAGCTCCCTGCCAAGCAGGCCGAGTACTG...GATCCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CAA 90 bp AGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGATCAGCACCATCCAGCCAGTaGTTGAAGGGCGCGGCCCGC +
Preference number: 5 (lower is better)
Translates to: STWLAFLLGPCSEGRMGSAPSSQ*LKGAAR
Trigger: GCGGGCCGCGCCCTTCAACAACTGGCTGGATGGTGC...TGATCCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS CCA 90 bp GGATTGGTGGAGCAGGGCCGCAGCCCATACGTCTGGCAGATCTTCTaGATCTCACCCTGGATGCCCATGATGGCACCTCGCTCTCGGTCA +
Preference number: 5 (lower is better)
Translates to: GLVEQGRSPYVWQIF*ISPWMPMMAPRSRS
Trigger: TGACCGAGAGCGAGGTGCCATCATGGGCATCCAGGGTGAGATCCAGAAGATCTGCCAGACGTATGGGCTGCGGCCCTGCTCCACCAATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS CCA 90 bp CTGCCCTCTGGAGCTCCTCGTGAGCCTCTTCCAGCACCTCGCTGGTaGGACACAGAGCCCTATCCCCATTTCACAGTCAGGAACACAGAG +
Preference number: 5 (lower is better)
Translates to: LPSGAPREPLPAPRW*DTEPYPHFTVRNTE
Trigger: CTCTGTGTTCCTGACTGTGAAATGGGGATAGGGCTCTGTGTCCCACCAGCGAGGTGCTGGAAGAGGCTCACGAGGAGCTCCAGAGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502692.5
CDS CCA 90 bp AGGCTGCCCTCTGGAGCTCCTCGTGAGCCTCTTCCAGCACCTCGCTaGTGGGACACAGAGCCCTATCCCCATTTCACAGTCAGGAACACA +
Preference number: 5 (lower is better)
Translates to: RLPSGAPREPLPAPR*WDTEPYPHFTVRNT
Trigger: TGTGTTCCTGACTGTGAAATGGGGATAGGGCTCTGTGTCCCACCAGCGAGGTGCTGGAAGAGGCTCACGAGGAGCTCCAGAGGGCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502692.5
CDS-3UTR CAA 90 bp CACTCAAACCCTACGACTGGCTCTGGGGGATGTAGGGCACAGTCCTGTCTCCTCATCTGGGTGCCTGCCTaGCGCAGGTGTGAGTTGCAC +
Preference number: 5 (lower is better)
Translates to: HSNPTTGSGGCRAQSCLLIWVPA*RRCELH
Trigger: GTGCAACTCACACCTGCGCAAGGCAGGCACCCAGAT...GAGGAGACAGGACTGTGCCCTACATCCCCCAGAGCCAGTCGTAGGGTTTGAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511191.1
CDS-3UTR CAA 90 bp AAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGATCTCCTGGCTCAGTCCCTaGGCGTCTCGGGTCAGTACC +
Preference number: 5 (lower is better)
Translates to: KHLAGFSLRPLLRGTDGISWLSP*ASRVST
Trigger: GGTACTGACCCGAGACGCCAAGGGACTGAGCCAGGA...GATCCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CAA 90 bp AGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGATCAGGGCGCTGTGTGACCTaGAGAAATCCACGGGACCTC +
Preference number: 5 (lower is better)
Translates to: STWLAFLLGPCSEGRMGSGRCVT*RNPRDL
Trigger: GAGGTCCCGTGGATTTCTCAAGGTCACACAGCGCCC...TGATCCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502692.5
CDS-3UTR CAA 90 bp AGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGATCACAGGGTCCAATGGCATaGGCCTGGGCCGCAAACTGT +
Preference number: 5 (lower is better)
Translates to: STWLAFLLGPCSEGRMGSQGPMA*AWAANC
Trigger: ACAGTTTGCGGCCCAGGCCAATGCCATTGGACCCTG...TGATCCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CAA 90 bp CAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGGATGCTCGGAACTCGTaGAGCTGCTCCTGGCTCAGT +
Preference number: 5 (lower is better)
Translates to: QKHLAGFSLRPLLRGTDGDARNS*SCSWLS
Trigger: ACTGAGCCAGGAGCAGCTCAACGAGTTCCGAGCATC...CCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CAA 90 bp TGGGGAGAGACCCAGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCAGTACTCGGCCTGCTaGGCAGGGAGCTCGCGCCGC +
Preference number: 5 (lower is better)
Translates to: WGETQRGIFIQKHLAGFSQYSAC*AGSSRR
Trigger: GCGGCGCGAGCTCCCTGCCAAGCAGGCCGAGTACTG...AGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCTGGGTCTCTCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513398.2
CDS GCA 90 bp GAGGGACGGATGGGATCAGCCACAGGGTGCATCCTCTCTCCATCTTaGATAGAGAACCTCAGTGGTTGGGGTCAAAGGTCGCTCTCCCCA +
Preference number: 5 (lower is better)
Translates to: EGRMGSATGCILSPS*IENLSGWGQRSLSP
Trigger: TGGGGAGAGCGACCTTTGACCCCAACCACTGAGGTTCTCTATGCAAGATGGAGAGAGGATGCACCCTGTGGCTGATCCCATCCGTCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CAA 90 bp TTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGCGGAGATCCTGGGTTaGCATTCCTGCTCCGCTGCT +
Preference number: 5 (lower is better)
Translates to: FRSTWLAFLLGPCSEGRMAEILG*HSCSAA
Trigger: AGCAGCGGAGCAGGAATGCAAACCCAGGATCTCCGC...CATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502692.5
CDS-3UTR CAA 90 bp AGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCAGCCCCCGCCAGGCGTaGGCGATGTCCGAGACCAGC +
Preference number: 5 (lower is better)
Translates to: REGSLFRSTWLAFLLGPCSPRQA*AMSETS
Trigger: GCTGGTCTCGGACATCGCCAACGCCTGGCGGGGGCT...GCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CAA 90 bp TTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGACCACCCCAGCTGCGTaGGGGTCCACCATGGTCATG +
Preference number: 5 (lower is better)
Translates to: LFRSTWLAFLLGPCSEGRTTPAA*GSTMVM
Trigger: CATGACCATGGTGGACCCCAACGCAGCTGGGGTGGT...CCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CAA 90 bp AAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGATCTTTTCTCTTAGGCCCTaGCTCCGAGGGACGGATGGG +
Preference number: 5 (lower is better)
Translates to: KHLAGFSLRPLLRGTDGIFSLRP*LRGTDG
Trigger: CCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAA...GATCCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CAA 90 bp TTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATCTGGGTGCCTGCCTaGCGCAGGTGTGAGTTGCAC +
Preference number: 5 (lower is better)
Translates to: LFRSTWLAFLLGPCSEGRIWVPA*RRCELH
Trigger: GTGCAACTCACACCTGCGCAAGGCAGGCACCCAGAT...CCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CAA 90 bp AGGGGCAGAGGACAGCACTCAAACCCTACGACTGGCTCTGGGGGATGTAGGGCAAGGAGCAGCATGAGTTaGAGGCCATTGCGGAAATCT +
Preference number: 5 (lower is better)
Translates to: RGRGQHSNPTTGSGGCRARSSMS*RPLRKS
Trigger: AGATTTCCGCAATGGCCTCAAACTCATGCTGCTCCT...TGCCCTACATCCCCCAGAGCCAGTCGTAGGGTTTGAGTGCTGTCCTCTGCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511191.1
CDS-3UTR CAA 90 bp CACTCAAACCCTACGACTGGCTCTGGGGGATGTAGGGCACAGTCCTGTCTCCTCTTGTGGAAGCGCATCTaGCCTTTATCTGGCCTAGGC +
Preference number: 5 (lower is better)
Translates to: HSNPTTGSGGCRAQSCLLLWKRI*PLSGLG
Trigger: GCCTAGGCCAGATAAAGGCAAGATGCGCTTCCACAA...GAGGAGACAGGACTGTGCCCTACATCCCCCAGAGCCAGTCGTAGGGTTTGAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511191.1
CDS-3UTR CAA 90 bp GGACAGCACTCAAACCCTACGACTGGCTCTGGGGGATGTAGGGCACAGTCCTGTACCAGTTTAACCCCCTaGCTGGCAATGAAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: GQHSNPTTGSGGCRAQSCTSLTP*LAMKSR
Trigger: CCTGGACTTCATTGCCAGCAAGGGGGTTAAACTGGT...ACAGGACTGTGCCCTACATCCCCCAGAGCCAGTCGTAGGGTTTGAGTGCTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000511191.1
CDS-3UTR CAA 90 bp AGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGATCATTCTGCACGTTGACGTaGCGGTACGGTGCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: STWLAFLLGPCSEGRMGSFCTLT*RYGAVF
Trigger: GAAGACAGCACCGTACCGCAACGTCAACGTGCAGAA...TGATCCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CAA 90 bp GAGACCCAGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGGCACCATCCAGCCAGTaGTTGAAGGGCGCGGCCCGC +
Preference number: 5 (lower is better)
Translates to: ETQRGIFIQKHLAGFSLRAPSSQ*LKGAAR
Trigger: GCGGGCCGCGCCCTTCAACAACTGGCTGGATGGTGC...CCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCTGGGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513398.2
CDS-3UTR CAA 90 bp TTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGCGGACCATATCCCACTaGGTGTTGATGTCCTGCGGG +
Preference number: 5 (lower is better)
Translates to: FRSTWLAFLLGPCSEGRMRTISH*VLMSCG
Trigger: CCCGCAGGACATCAACACCAAGTGGGATATGGTCCG...CATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CAA 90 bp TTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGATGCTCGGAACTCGTaGAGCTGCTCCTGGCTCAGT +
Preference number: 5 (lower is better)
Translates to: FRSTWLAFLLGPCSEGRMDARNS*SCSWLS
Trigger: ACTGAGCCAGGAGCAGCTCAACGAGTTCCGAGCATC...CATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CAA 90 bp AAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGATCAGGCGCCGAGCTGTTTaGCATGTTTTCTGGGGTGAT +
Preference number: 5 (lower is better)
Translates to: KHLAGFSLRPLLRGTDGIRRRAV*HVFWGD
Trigger: ATCACCCCAGAAAACATGCAAAACAGCTCGGCGCCT...GATCCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502692.5
CDS-3UTR CAA 90 bp AAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGATCTTGTGGAAGCGCATCTaGCCTTTATCTGGCCTAGGC +
Preference number: 5 (lower is better)
Translates to: KHLAGFSLRPLLRGTDGILWKRI*PLSGLG
Trigger: GCCTAGGCCAGATAAAGGCAAGATGCGCTTCCACAA...GATCCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CAA 90 bp AAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGATCACCAGTTTAACCCCCTaGCTGGCAATGAAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: KHLAGFSLRPLLRGTDGITSLTP*LAMKSR
Trigger: CCTGGACTTCATTGCCAGCAAGGGGGTTAAACTGGT...GATCCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CAA 90 bp GAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCACCACCCCAGCTGCGTaGGGGTCCACCATGGTCATG +
Preference number: 5 (lower is better)
Translates to: EGSLFRSTWLAFLLGPCSTTPAA*GSTMVM
Trigger: CATGACCATGGTGGACCCCAACGCAGCTGGGGTGGT...GGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CAA 90 bp CAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGGAAGGAAGCTACAACTaGCTCAGTCGTGTCAGTCTC +
Preference number: 5 (lower is better)
Translates to: QKHLAGFSLRPLLRGTDGEGSYN*LSRVSL
Trigger: GAGACTGACACGACTGAGCAAGTTGTAGCTTCCTTC...CCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CAA 90 bp CAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGCATCCTCTCTCCATCTaGCATAGAGAACCTCAGTGG +
Preference number: 5 (lower is better)
Translates to: QKHLAGFSLRPLLRGTDGHPLSI*HREPQW
Trigger: CCACTGAGGTTCTCTATGCAAGATGGAGAGAGGATG...CCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CAA 90 bp CACTCAAACCCTACGACTGGCTCTGGGGGATGTAGGGCACAGTCCTGTCTCCTCTTAACGTTGGCGATTTaGTGGAAGCGCATCTTGCCT +
Preference number: 5 (lower is better)
Translates to: HSNPTTGSGGCRAQSCLLLTLAI*WKRILP
Trigger: AGGCAAGATGCGCTTCCACAAAATCGCCAACGTTAA...GAGGAGACAGGACTGTGCCCTACATCCCCCAGAGCCAGTCGTAGGGTTTGAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511191.1
CDS-3UTR CAA 90 bp GACAGCACTCAAACCCTACGACTGGCTCTGGGGGATGTAGGGCACAGTCCTGTCATGAAGTCCAGGGCCTaGTTAACGTTGGCGATTTTG +
Preference number: 5 (lower is better)
Translates to: DSTQTLRLALGDVGHSPVMKSRA*LTLAIL
Trigger: CAAAATCGCCAACGTTAACAAGGCCCTGGACTTCAT...GACAGGACTGTGCCCTACATCCCCCAGAGCCAGTCGTAGGGTTTGAGTGCTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511191.1
CDS-3UTR CAA 90 bp AAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGATCAGAAGCAAGCCTTCCTaGGCTGAGGTTTCTTCCACA +
Preference number: 5 (lower is better)
Translates to: KHLAGFSLRPLLRGTDGIRSKPS*AEVSST
Trigger: TGTGGAAGAAACCTCAGCCAAGGAAGGCTTGCTTCT...GATCCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CAA 90 bp TTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATATCCCACTTGGTGTaGATGTCCTGCGGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: LFRSTWLAFLLGPCSEGRISHLV*MSCGLR
Trigger: CCTCAGCCCGCAGGACATCAACACCAAGTGGGATAT...CCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CAA 90 bp TTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGAGAGAACCTCAGTGGTaGGGGTCAAAGGTCGCTCTC +
Preference number: 5 (lower is better)
Translates to: LFRSTWLAFLLGPCSEGRREPQW*GSKVAL
Trigger: GAGAGCGACCTTTGACCCCAACCACTGAGGTTCTCT...CCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CAA 90 bp AAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGATCCATCCTCTCTCCATCTaGCATAGAGAACCTCAGTGG +
Preference number: 5 (lower is better)
Translates to: KHLAGFSLRPLLRGTDGIHPLSI*HREPQW
Trigger: CCACTGAGGTTCTCTATGCAAGATGGAGAGAGGATG...GATCCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CAA 90 bp AGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGATCATTAACGTTGGCGATTTaGTGGAAGCGCATCTTGCCT +
Preference number: 5 (lower is better)
Translates to: STWLAFLLGPCSEGRMGSLTLAI*WKRILP
Trigger: AGGCAAGATGCGCTTCCACAAAATCGCCAACGTTAA...TGATCCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CAA 90 bp AAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGATCATGAAGTCCAGGGCCTaGTTAACGTTGGCGATTTTG +
Preference number: 5 (lower is better)
Translates to: KHLAGFSLRPLLRGTDGIMKSRA*LTLAIL
Trigger: CAAAATCGCCAACGTTAACAAGGCCCTGGACTTCAT...GATCCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CAA 90 bp AGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCCAGGGTCCAATGGCATaGGCCTGGGCCGCAAACTGT +
Preference number: 5 (lower is better)
Translates to: REGSLFRSTWLAFLLGPCQGPMA*AWAANC
Trigger: ACAGTTTGCGGCCCAGGCCAATGCCATTGGACCCTG...GCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CAA 90 bp GAGAGACCCAGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTATCCTGGCTCAGTCCCTaGGCGTCTCGGGTCAGTACC +
Preference number: 5 (lower is better)
Translates to: ERPREGSLFRSTWLAFLLSWLSP*ASRVST
Trigger: GGTACTGACCCGAGACGCCAAGGGACTGAGCCAGGA...TAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCTGGGTCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513398.2
CDS GCA 90 bp CTTGTATTTCTGGATTCAAGTCTCAGCTCAGCTCAGCCACTGACTTaGTGTGCATCCTGGGCCAGTCCCTTTCCCTCTCTGAGCTTTCGT +
Preference number: 5 (lower is better)
Translates to: LVFLDSSLSSAQPLT*CASWASPFPSLSFR
Trigger: ACGAAAGCTCAGAGAGGGAAAGGGACTGGCCCAGGATGCACAGCAAGTCAGTGGCTGAGCTGAGCTGAGACTTGAATCCAGAAATACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511191.1
CDS-3UTR CAA 90 bp TTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGAGGAGCAGCATGAGTTaGAGGCCATTGCGGAAATCT +
Preference number: 5 (lower is better)
Translates to: LFRSTWLAFLLGPCSEGRRSSMS*RPLRKS
Trigger: AGATTTCCGCAATGGCCTCAAACTCATGCTGCTCCT...CCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CAA 90 bp GAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCTGGAAGTTCTGCACGTaGACGTTGCGGTACGGTGCT +
Preference number: 5 (lower is better)
Translates to: EGSLFRSTWLAFLLGPCSWKFCT*TLRYGA
Trigger: AGCACCGTACCGCAACGTCAACGTGCAGAACTTCCA...GGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CAA 90 bp GAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCTTCACTGCCAGCACCTaGCAGATCCTGTTGGCAGCT +
Preference number: 5 (lower is better)
Translates to: EGSLFRSTWLAFLLGPCSFTAST*QILLAA
Trigger: AGCTGCCAACAGGATCTGCAAGGTGCTGGCAGTGAA...GGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CAA 90 bp TTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGCGAAAGTCCTCTAGTTaGCGCTGCATGGCACTCATG +
Preference number: 5 (lower is better)
Translates to: FIQKHLAGFSLRPLLRGTRKSSS*RCMALM
Trigger: CATGAGTGCCATGCAGCGCAAACTAGAGGACTTTCG...CGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CAA 90 bp GAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCATATCCCACTTGGTGTaGATGTCCTGCGGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: EGSLFRSTWLAFLLGPCSISHLV*MSCGLR
Trigger: CCTCAGCCCGCAGGACATCAACACCAAGTGGGATAT...GGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CAA 90 bp AGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGGACCATATCCCACTaGGTGTTGATGTCCTGCGGG +
Preference number: 5 (lower is better)
Translates to: RGIFIQKHLAGFSLRPLLRTISH*VLMSCG
Trigger: CCCGCAGGACATCAACACCAAGTGGGATATGGTCCG...GAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CAA 90 bp TTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGAGGAGCAGCATGAGTTaGAGGCCATTGCGGAAATCT +
Preference number: 5 (lower is better)
Translates to: FIQKHLAGFSLRPLLRGTRSSMS*RPLRKS
Trigger: AGATTTCCGCAATGGCCTCAAACTCATGCTGCTCCT...CGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CAA 90 bp GAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCTTGTGGAAGCGCATCTaGCCTTTATCTGGCCTAGGC +
Preference number: 5 (lower is better)
Translates to: EGSLFRSTWLAFLLGPCSLWKRI*PLSGLG
Trigger: GCCTAGGCCAGATAAAGGCAAGATGCGCTTCCACAA...GGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CAA 90 bp AGACCCAGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCTTCTGCACGTTGACGTaGCGGTACGGTGCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: RPREGSLFRSTWLAFLLGFCTLT*RYGAVF
Trigger: GAAGACAGCACCGTACCGCAACGTCAACGTGCAGAA...GCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCTGGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513398.2
CDS-3UTR CAA 90 bp AGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTGGAAGTTCTGCACGTaGACGTTGCGGTACGGTGCT +
Preference number: 5 (lower is better)
Translates to: REGSLFRSTWLAFLLGPCWKFCT*TLRYGA
Trigger: AGCACCGTACCGCAACGTCAACGTGCAGAACTTCCA...GCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CAA 90 bp GAGACCCAGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGTTCACTGCCAGCACCTaGCAGATCCTGTTGGCAGCT +
Preference number: 5 (lower is better)
Translates to: ETQRGIFIQKHLAGFSLRFTAST*QILLAA
Trigger: AGCTGCCAACAGGATCTGCAAGGTGCTGGCAGTGAA...CCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCTGGGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513398.2
CDS-3UTR CAA 90 bp TTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGAAGGAAGCTACAACTaGCTCAGTCGTGTCAGTCTC +
Preference number: 5 (lower is better)
Translates to: FIQKHLAGFSLRPLLRGTEGSYN*LSRVSL
Trigger: GAGACTGACACGACTGAGCAAGTTGTAGCTTCCTTC...CGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CAA 90 bp AGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCAGAGAACCTCAGTGGTaGGGGTCAAAGGTCGCTCTC +
Preference number: 5 (lower is better)
Translates to: REGSLFRSTWLAFLLGPCREPQW*GSKVAL
Trigger: GAGAGCGACCTTTGACCCCAACCACTGAGGTTCTCT...GCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CAA 90 bp GAGAGACCCAGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTATTTTCTCTTAGGCCCTaGCTCCGAGGGACGGATGGG +
Preference number: 5 (lower is better)
Translates to: ERPREGSLFRSTWLAFLLFSLRP*LRGTDG
Trigger: CCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAA...TAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCTGGGTCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513398.2
CDS-3UTR CAA 90 bp AGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGGATGGGATCATTTATTCAGAAGCACTaGGCTGGCTTTTCTCTTAGG +
Preference number: 5 (lower is better)
Translates to: STWLAFLLGPCSEGRMGSFIQKH*AGFSLR
Trigger: CCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAA...TGATCCCATCCGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CAA 90 bp AGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCCGAAAGTCCTCTAGTTaGCGCTGCATGGCACTCATG +
Preference number: 5 (lower is better)
Translates to: REGSLFRSTWLAFLLGPCRKSSS*RCMALM
Trigger: CATGAGTGCCATGCAGCGCAAACTAGAGGACTTTCG...GCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CAA 90 bp TTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCGAGGGACGTCTCCTGCCAAGATCTaGAAGGAAGCTACAACTTGC +
Preference number: 5 (lower is better)
Translates to: FIQKHLAGFSLRPLLRGTSPAKI*KEATTC
Trigger: GCAAGTTGTAGCTTCCTTCAAGATCTTGGCAGGAGA...CGTCCCTCGGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CAA 90 bp GAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCTTAACGTTGGCGATTTaGTGGAAGCGCATCTTGCCT +
Preference number: 5 (lower is better)
Translates to: EGSLFRSTWLAFLLGPCSLTLAI*WKRILP
Trigger: AGGCAAGATGCGCTTCCACAAAATCGCCAACGTTAA...GGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CAA 90 bp GAGAGACCCAGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAACCAGTTTAACCCCCTaGCTGGCAATGAAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: ERPREGSLFRSTWLAFLLTSLTP*LAMKSR
Trigger: CCTGGACTTCATTGCCAGCAAGGGGGTTAAACTGGT...TAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCTGGGTCTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513398.2
CDS-3UTR CAA 90 bp AGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCAGAAGCAAGCCTTCCTaGGCTGAGGTTTCTTCCACA +
Preference number: 5 (lower is better)
Translates to: RGIFIQKHLAGFSLRPLLRSKPS*AEVSST
Trigger: TGTGGAAGAAACCTCAGCCAAGGAAGGCTTGCTTCT...GAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CAA 90 bp GAGACCCAGAGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGATGAAGTCCAGGGCCTaGTTAACGTTGGCGATTTTG +
Preference number: 5 (lower is better)
Translates to: ETQRGIFIQKHLAGFSLRMKSRA*LTLAIL
Trigger: CAAAATCGCCAACGTTAACAAGGCCCTGGACTTCAT...CCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCTCTGGGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513398.2
CDS-3UTR CAA 90 bp AGAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCTCTCCTGCCAAGATCTaGAAGGAAGCTACAACTTGC +
Preference number: 5 (lower is better)
Translates to: RGIFIQKHLAGFSLRPLLSPAKI*KEATTC
Trigger: GCAAGTTGTAGCTTCCTTCAAGATCTTGGCAGGAGA...GAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CAA 90 bp GAGGGATCTTTATTCAGAAGCACTTGGCTGGCTTTTCTCTTAGGCCCTTGCTCCTTTATTCAGAAGCACTaGGCTGGCTTTTCTCTTAGG +
Preference number: 5 (lower is better)
Translates to: EGSLFRSTWLAFLLGPCSFIQKH*AGFSLR
Trigger: CCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAA...GGAGCAAGGGCCTAAGAGAAAAGCCAGCCAAGTGCTTCTGAATAAAGATCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS-3UTR CAA 90 bp TCCTGTCTCCTCAGTCAGGGTAGGTCTCAGAGCCTTGTATTTCTGGATTCAAGTGTAGGTCTCAGAGCCTaGTATTTCTGGATTCAAGTC +
Preference number: 5 (lower is better)
Translates to: SCLLSQGRSQSLVFLDSSVGLRA*YFWIQV
Trigger: GACTTGAATCCAGAAATACAAGGCTCTGAGACCTAC...ACTTGAATCCAGAAATACAAGGCTCTGAGACCTACCCTGACTGAGGAGACAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511191.1
CDS TCA 72 bp CGGGCCGCTCTAGAGGCTGCCCTCTGGAGCTCCTCGTaGGCCTCTTCCAGCACCTCGCTGGTGGGACACAGA +
Preference number: 6 (lower is better)
Translates to: RAALEAALWSSS*ASSSTSLVGHR
Trigger: TCTGTGTCCCACCAGCGAGGTGCTGGAAGAGGCTCACGAGGAGCTCCAGAGGGCAGCCTCTAGAGCGGCCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502692.5
CDS CCA 72 bp GAGCAGGGCCGCAGCCCATACGTCTGGCAGATCTTCTaGATCTCACCCTGGATGCCCATGATGGCACCTCGC +
Preference number: 6 (lower is better)
Translates to: EQGRSPYVWQIF*ISPWMPMMAPR
Trigger: GCGAGGTGCCATCATGGGCATCCAGGGTGAGATCCAGAAGATCTGCCAGACGTATGGGCTGCGGCCCTGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS GCA 72 bp GTGGATCTCGCGGCGGAGATCCTGGGTTTGCATTCCTaGTCCGCTGCTGGGGCGCTGTGTGACCTTGAGAAA +
Preference number: 6 (lower is better)
Translates to: VDLAAEILGLHS*SAAGALCDLEK
Trigger: TTTCTCAAGGTCACACAGCGCCCCAGCAGCGGAGCAGGAATGCAAACCCAGGATCTCCGCCGCGAGATCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502692.5
CDS CCA 72 bp GGAGCTCCTCGTGAGCCTCTTCCAGCACCTCGCTGGTaGGACACAGAGCCCTATCCCCATTTCACAGTCAGG +
Preference number: 6 (lower is better)
Translates to: GAPREPLPAPRW*DTEPYPHFTVR
Trigger: CCTGACTGTGAAATGGGGATAGGGCTCTGTGTCCCACCAGCGAGGTGCTGGAAGAGGCTCACGAGGAGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502692.5
CDS TCA 72 bp CCACTGATCGCAGATGGCCTGGCAGCGGCTATTCACTaGGGCTGCCTCGTGGTAGTCCAGCTCATTGAGCTC +
Preference number: 6 (lower is better)
Translates to: PLIADGLAAAIH*GCLVVVQLIEL
Trigger: GAGCTCAATGAGCTGGACTACCACGAGGCAGCCTCAGTGAATAGCCGCTGCCAGGCCATCTGCGATCAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS CCA 72 bp TCTGGAGCTCCTCGTGAGCCTCTTCCAGCACCTCGCTaGTGGGACACAGAGCCCTATCCCCATTTCACAGTC +
Preference number: 6 (lower is better)
Translates to: SGAPREPLPAPR*WDTEPYPHFTV
Trigger: GACTGTGAAATGGGGATAGGGCTCTGTGTCCCACCAGCGAGGTGCTGGAAGAGGCTCACGAGGAGCTCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502692.5
CDS CAA 90 bp CGAGGGACGGATGGGATCAGCCACAGGGTGCATCCTCTCTCCATCTaGCATAGAGAACCTCAGTGGTTGGGGTCAAAGGTCGCTCTCCCC +
Preference number: 6 (lower is better)
Translates to: RGTDGISHRVHPLSI*HREPQWLGSKVALP
Trigger: GGGGAGAGCGACCTTTGACCCCAACCACTGAGGTTCTCTATGCAAGATGGAGAGAGGATGCACCCTGTGGCTGATCCCATCCGTCCCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS GCA 72 bp CTGGATTCAAGTCTCAGCTCAGCTCAGCCACTGACTTaGTGTGCATCCTGGGCCAGTCCCTTTCCCTCTCTG +
Preference number: 6 (lower is better)
Translates to: LDSSLSSAQPLT*CASWASPFPSL
Trigger: CAGAGAGGGAAAGGGACTGGCCCAGGATGCACAGCAAGTCAGTGGCTGAGCTGAGCTGAGACTTGAATCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511191.1
CDS GCA 72 bp ATGGGATCAGCCACAGGGTGCATCCTCTCTCCATCTTaGATAGAGAACCTCAGTGGTTGGGGTCAAAGGTCG +
Preference number: 6 (lower is better)
Translates to: MGSATGCILSPS*IENLSGWGQRS
Trigger: CGACCTTTGACCCCAACCACTGAGGTTCTCTATGCAAGATGGAGAGAGGATGCACCCTGTGGCTGATCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS CAA 72 bp CATCCTCTCTCCATCTTGCATAGAGAACCTCAGTGGTaGGGGTCAAAGGTCGCTCTCCCCATAGAGGGCACT +
Preference number: 6 (lower is better)
Translates to: HPLSILHREPQW*GSKVALPIEGT
Trigger: AGTGCCCTCTATGGGGAGAGCGACCTTTGACCCCAACCACTGAGGTTCTCTATGCAAGATGGAGAGAGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502692.5
ENST00000513398.2
CDS TCA 72 bp TATTTCTGGATTCAAGTCTCAGCTCAGCTCAGCCACTaGCTTGCTGTGCATCCTGGGCCAGTCCCTTTCCCT +
Preference number: 6 (lower is better)
Translates to: YFWIQVSAQLSH*LAVHPGPVPFP
Trigger: AGGGAAAGGGACTGGCCCAGGATGCACAGCAAGTCAGTGGCTGAGCTGAGCTGAGACTTGAATCCAGAAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511191.1