Pregenerated sensors for ACTL9 (Homo sapiens)
Ensembl gene IDs: ENSG00000181786Ensembl transcript IDs: ENST00000324436.5, ENST00000612068.1
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCTGCGCAGGGGTTGCACCAGCGTCAGCTCTGGGAGCACGCGGGCTaGCTCGCCGATGAACGTCTGCAGCCCGGACTGCCCCGAGGTGGC | + |
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Preference number: 5 (lower is better) Translates to: AAQGLHQRQLWEHAG*LADERLQPGLPRGG Trigger: GCCACCTCGGGGCAGTCCGGGCTGCAGACGTTCATCGGCGAGGCAGCCCGCGTGCTCCCAGAGCTGACGCTGGTGCAACCCCTGCGCAGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000324436.5 ENST00000612068.1 |
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| CDS TCA 90 bp | CGTGGGTGGCCACTCGGAGGTCGTGCTCCAGCAGGTGGCGCCAGATaGGCTCGGCGGCATCCCAGTCCACGACGATGCCGCTGCGCAGGG | + |
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Preference number: 5 (lower is better) Translates to: RGWPLGGRAPAGGAR*ARRHPSPRRCRCAG Trigger: CCCTGCGCAGCGGCATCGTCGTGGACTGGGATGCCGCCGAGCTCATCTGGCGCCACCTGCTGGAGCACGACCTCCGAGTGGCCACCCACG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000324436.5 ENST00000612068.1 |
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| CDS GCA 90 bp | GGGAGCACGCGGGCTGCCTCGCCGATGAACGTCTGCAGCCCGGACTaGCCCGAGGTGGCGGGTTTCTTGGGCTGGCAGCCCAGGATGGTG | + |
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Preference number: 5 (lower is better) Translates to: GSTRAASPMNVCSPD*PEVAGFLGWQPRMV Trigger: CACCATCCTGGGCTGCCAGCCCAAGAAACCCGCCACCTCGGGGCAGTCCGGGCTGCAGACGTTCATCGGCGAGGCAGCCCGCGTGCTCCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000324436.5 ENST00000612068.1 |
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| CDS GCA 90 bp | AGCGTCAGCTCTGGGAGCACGCGGGCTGCCTCGCCGATGAACGTCTaGAGCCCGGACTGCCCCGAGGTGGCGGGTTTCTTGGGCTGGCAG | + |
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Preference number: 5 (lower is better) Translates to: SVSSGSTRAASPMNV*SPDCPEVAGFLGWQ Trigger: CTGCCAGCCCAAGAAACCCGCCACCTCGGGGCAGTCCGGGCTGCAGACGTTCATCGGCGAGGCAGCCCGCGTGCTCCCAGAGCTGACGCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000324436.5 ENST00000612068.1 |
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| CDS CCA 90 bp | GTCCACGACGATGCCGCTGCGCAGGGGTTGCACCAGCGTCAGCTCTaGGAGCACGCGGGCTGCCTCGCCGATGAACGTCTGCAGCCCGGA | + |
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Preference number: 5 (lower is better) Translates to: VHDDAAAQGLHQRQL*EHAGCLADERLQPG Trigger: TCCGGGCTGCAGACGTTCATCGGCGAGGCAGCCCGCGTGCTCCCAGAGCTGACGCTGGTGCAACCCCTGCGCAGCGGCATCGTCGTGGAC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000324436.5 ENST00000612068.1 |
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| CDS CCA 90 bp | GTGGCCGGGCTGAAGGGTGGGTCGGAGAACAGCAGCGGGTGGTCGTaGGTGGCCACTCGGAGGTCGTGCTCCAGCAGGTGGCGCCAGATG | + |
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Preference number: 5 (lower is better) Translates to: VAGLKGGSENSSGWS*VATRRSCSSRWRQM Trigger: CATCTGGCGCCACCTGCTGGAGCACGACCTCCGAGTGGCCACCCACGACCACCCGCTGCTGTTCTCCGACCCACCCTTCAGCCCGGCCAC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000324436.5 ENST00000612068.1 |
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| CDS TCA 90 bp | GTTGCACCAGCGTCAGCTCTGGGAGCACGCGGGCTGCCTCGCCGATaGACGTCTGCAGCCCGGACTGCCCCGAGGTGGCGGGTTTCTTGG | + |
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Preference number: 5 (lower is better) Translates to: VAPASALGARGLPRR*TSAARTAPRWRVSW Trigger: CCAAGAAACCCGCCACCTCGGGGCAGTCCGGGCTGCAGACGTTCATCGGCGAGGCAGCCCGCGTGCTCCCAGAGCTGACGCTGGTGCAAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000324436.5 ENST00000612068.1 |
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| CDS GCA 90 bp | TCGGAGAACAGCAGCGGGTGGTCGTGGGTGGCCACTCGGAGGTCGTaGTCCAGCAGGTGGCGCCAGATGAGCTCGGCGGCATCCCAGTCC | + |
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Preference number: 5 (lower is better) Translates to: SENSSGWSWVATRRS*SSRWRQMSSAASQS Trigger: GGACTGGGATGCCGCCGAGCTCATCTGGCGCCACCTGCTGGAGCACGACCTCCGAGTGGCCACCCACGACCACCCGCTGCTGTTCTCCGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000324436.5 ENST00000612068.1 |
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| CDS CCA 90 bp | GAAATTCCTGGTGGGCTGGGCAGCCACCACCACGTGGGTCTCGGCTaGCAGAGCGCGCAGCAGCTCTGCCCGGAAGCGACCCTCGAAGCC | + |
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Preference number: 5 (lower is better) Translates to: EIPGGLGSHHHVGLG*QSAQQLCPEATLEA Trigger: GGCTTCGAGGGTCGCTTCCGGGCAGAGCTGCTGCGCGCTCTGCCAGCCGAGACCCACGTGGTGGTGGCTGCCCAGCCCACCAGGAATTTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000324436.5 ENST00000612068.1 |
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| CDS CCA 90 bp | ACAGGTGCCTGTGCCCATGTCAATAACCACCGCGCCGGTCTTTGGTaGCAGCCTGTCGGCCACCATGCCGGGGGAGTCCCGCTGCAGGGG | + |
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Preference number: 5 (lower is better) Translates to: TGACAHVNNHRAGLW*QPVGHHAGGVPLQG Trigger: CCCCTGCAGCGGGACTCCCCCGGCATGGTGGCCGACAGGCTGCCACCAAAGACCGGCGCGGTGGTTATTGACATGGGCACAGGCACCTGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000324436.5 ENST00000612068.1 |
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| CDS GCA 90 bp | TGGGCCAAGTCCGCGCGCATCTCCAGTGACAACTTGCGGAGACTCTaGTTGGCCATGGTGGAGAGGCCGACGGGTGACAGCCCCGGGACC | + |
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Preference number: 5 (lower is better) Translates to: WAKSARISSDNLRRL*LAMVERPTGDSPGT Trigger: GGTCCCGGGGCTGTCACCCGTCGGCCTCTCCACCATGGCCAAGCAGAGTCTCCGCAAGTTGTCACTGGAGATGCGCGCGGACTTGGCCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000324436.5 ENST00000612068.1 |
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| CDS TCA 90 bp | GCAGAGCGCGCAGCAGCTCTGCCCGGAAGCGACCCTCGAAGCCGGTaGAGAGCGAGGACCCACCGCAGAGAAGCACGTTTTGGGCCAAGT | + |
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Preference number: 5 (lower is better) Translates to: AERAAALPGSDPRSR*RARTHRREARFGPS Trigger: ACTTGGCCCAAAACGTGCTTCTCTGCGGTGGGTCCTCGCTCTTCACCGGCTTCGAGGGTCGCTTCCGGGCAGAGCTGCTGCGCGCTCTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000324436.5 ENST00000612068.1 |
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| CDS CCA 90 bp | CTTACAGGTGCCTGTGCCCATGTCAATAACCACCGCGCCGGTCTTTaGTGGCAGCCTGTCGGCCACCATGCCGGGGGAGTCCCGCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: LTGACAHVNNHRAGL*WQPVGHHAGGVPLQ Trigger: CTGCAGCGGGACTCCCCCGGCATGGTGGCCGACAGGCTGCCACCAAAGACCGGCGCGGTGGTTATTGACATGGGCACAGGCACCTGTAAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000324436.5 ENST00000612068.1 |
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| CDS CCA 90 bp | CCAAGTCCGCGCGCATCTCCAGTGACAACTTGCGGAGACTCTGCTTaGCCATGGTGGAGAGGCCGACGGGTGACAGCCCCGGGACCTCTG | + |
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Preference number: 5 (lower is better) Translates to: PSPRASPVTTCGDSA*PWWRGRRVTAPGPL Trigger: CAGAGGTCCCGGGGCTGTCACCCGTCGGCCTCTCCACCATGGCCAAGCAGAGTCTCCGCAAGTTGTCACTGGAGATGCGCGCGGACTTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000324436.5 ENST00000612068.1 |
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| CDS CCA 90 bp | ATCCATACGGAGAAATTCCTGGTGGGCTGGGCAGCCACCACCACGTaGGTCTCGGCTGGCAGAGCGCGCAGCAGCTCTGCCCGGAAGCGA | + |
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Preference number: 5 (lower is better) Translates to: IHTEKFLVGWAATTT*VSAGRARSSSARKR Trigger: TCGCTTCCGGGCAGAGCTGCTGCGCGCTCTGCCAGCCGAGACCCACGTGGTGGTGGCTGCCCAGCCCACCAGGAATTTCTCCGTATGGAT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000324436.5 ENST00000612068.1 |
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| CDS CCA 90 bp | CGGGTTTCTTGGGCTGGCAGCCCAGGATGGTGGCCACGGTGTAGGTaGGGCTGGCCTGCCCAGCAAAACCTACCTTACAGGTGCCTGTGC | + |
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Preference number: 5 (lower is better) Translates to: RVSWAGSPGWWPRCR*GWPAQQNLPYRCLC Trigger: GCACAGGCACCTGTAAGGTAGGTTTTGCTGGGCAGGCCAGCCCCACCTACACCGTGGCCACCATCCTGGGCTGCCAGCCCAAGAAACCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000324436.5 ENST00000612068.1 |
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| CDS CCA 90 bp | TCTTGGGCTGGCAGCCCAGGATGGTGGCCACGGTGTAGGTGGGGCTaGCCTGCCCAGCAAAACCTACCTTACAGGTGCCTGTGCCCATGT | + |
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Preference number: 5 (lower is better) Translates to: SWAGSPGWWPRCRWG*PAQQNLPYRCLCPC Trigger: ACATGGGCACAGGCACCTGTAAGGTAGGTTTTGCTGGGCAGGCCAGCCCCACCTACACCGTGGCCACCATCCTGGGCTGCCAGCCCAAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000324436.5 ENST00000612068.1 |
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| CDS TCA 90 bp | ACCGCAGAGAAGCACGTTTTGGGCCAAGTCCGCGCGCATCTCCAGTaGCAACTTGCGGAGACTCTGCTTGGCCATGGTGGAGAGGCCGAC | + |
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Preference number: 5 (lower is better) Translates to: TAEKHVLGQVRAHLQ*QLAETLLGHGGEAD Trigger: GTCGGCCTCTCCACCATGGCCAAGCAGAGTCTCCGCAAGTTGTCACTGGAGATGCGCGCGGACTTGGCCCAAAACGTGCTTCTCTGCGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000324436.5 ENST00000612068.1 |
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| CDS GCA 90 bp | GAAGCACGTTTTGGGCCAAGTCCGCGCGCATCTCCAGTGACAACTTaGGGAGACTCTGCTTGGCCATGGTGGAGAGGCCGACGGGTGACA | + |
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Preference number: 5 (lower is better) Translates to: EARFGPSPRASPVTT*GDSAWPWWRGRRVT Trigger: TGTCACCCGTCGGCCTCTCCACCATGGCCAAGCAGAGTCTCCGCAAGTTGTCACTGGAGATGCGCGCGGACTTGGCCCAAAACGTGCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000324436.5 ENST00000612068.1 |
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| CDS CCA 90 bp | TCGAAGCCGGTGAAGAGCGAGGACCCACCGCAGAGAAGCACGTTTTaGGCCAAGTCCGCGCGCATCTCCAGTGACAACTTGCGGAGACTC | + |
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Preference number: 5 (lower is better) Translates to: SKPVKSEDPPQRSTF*AKSARISSDNLRRL Trigger: GAGTCTCCGCAAGTTGTCACTGGAGATGCGCGCGGACTTGGCCCAAAACGTGCTTCTCTGCGGTGGGTCCTCGCTCTTCACCGGCTTCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000324436.5 ENST00000612068.1 |
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| CDS TCA 72 bp | GCGTCAGCTCTGGGAGCACGCGGGCTGCCTCGCCGATaGACGTCTGCAGCCCGGACTGCCCCGAGGTGGCGG | + |
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Preference number: 6 (lower is better) Translates to: ASALGARGLPRR*TSAARTAPRWR Trigger: CCGCCACCTCGGGGCAGTCCGGGCTGCAGACGTTCATCGGCGAGGCAGCCCGCGTGCTCCCAGAGCTGACGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000324436.5 ENST00000612068.1 |
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| CDS GCA 72 bp | CGGGCTGCCTCGCCGATGAACGTCTGCAGCCCGGACTaGCCCGAGGTGGCGGGTTTCTTGGGCTGGCAGCCC | + |
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Preference number: 6 (lower is better) Translates to: RAASPMNVCSPD*PEVAGFLGWQP Trigger: GGGCTGCCAGCCCAAGAAACCCGCCACCTCGGGGCAGTCCGGGCTGCAGACGTTCATCGGCGAGGCAGCCCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000324436.5 ENST00000612068.1 |
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| CDS CAA 90 bp | GGGCCGGGCCTGGGGGCCTCCAGGGAGGACTGGGATTCCGAGGACTaGGGGCGACTTGCATCCATGGTTGCGGGACGCCAGGTGAGGGGG | + |
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Preference number: 6 (lower is better) Translates to: GPGLGASREDWDSED*GRLASMVAGRQVRG Trigger: CCCCCTCACCTGGCGTCCCGCAACCATGGATGCAAGTCGCCCCAAGTCCTCGGAATCCCAGTCCTCCCTGGAGGCCCCCAGGCCCGGCCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000324436.5 |
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| CDS CAA 90 bp | GAGCTCGGCGGCATCCCAGTCCACGACGATGCCGCTGCGCAGGGGTaGCACCAGCGTCAGCTCTGGGAGCACGCGGGCTGCCTCGCCGAT | + |
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Preference number: 6 (lower is better) Translates to: ELGGIPVHDDAAAQG*HQRQLWEHAGCLAD Trigger: ATCGGCGAGGCAGCCCGCGTGCTCCCAGAGCTGACGCTGGTGCAACCCCTGCGCAGCGGCATCGTCGTGGACTGGGATGCCGCCGAGCTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000324436.5 ENST00000612068.1 |
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| CDS GCA 72 bp | CCGCGCCGGTCTTTGGTGGCAGCCTGTCGGCCACCATaGCGGGGGAGTCCCGCTGCAGGGGCTTGTTCACCA | + |
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Preference number: 6 (lower is better) Translates to: PRRSLVAACRPP*RGSPAAGACSP Trigger: TGGTGAACAAGCCCCTGCAGCGGGACTCCCCCGGCATGGTGGCCGACAGGCTGCCACCAAAGACCGGCGCGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000324436.5 ENST00000612068.1 |
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| CDS GCA 72 bp | GGGTTGCACCAGCGTCAGCTCTGGGAGCACGCGGGCTaGCTCGCCGATGAACGTCTGCAGCCCGGACTGCCC | + |
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Preference number: 6 (lower is better) Translates to: GLHQRQLWEHAG*LADERLQPGLP Trigger: GGGCAGTCCGGGCTGCAGACGTTCATCGGCGAGGCAGCCCGCGTGCTCCCAGAGCTGACGCTGGTGCAACCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000324436.5 ENST00000612068.1 |
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| CDS GCA 72 bp | AGCAGCGGGTGGTCGTGGGTGGCCACTCGGAGGTCGTaGTCCAGCAGGTGGCGCCAGATGAGCTCGGCGGCA | + |
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Preference number: 6 (lower is better) Translates to: SSGWSWVATRRS*SSRWRQMSSAA Trigger: TGCCGCCGAGCTCATCTGGCGCCACCTGCTGGAGCACGACCTCCGAGTGGCCACCCACGACCACCCGCTGCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000324436.5 ENST00000612068.1 |
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| CDS CCA 72 bp | AGTCCCGCTGCAGGGGCTTGTTCACCACGTTGGGACTaGGGTTTGGGCCGGGCCTGGGGGCCTCCAGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: SPAAGACSPRWD*GLGRAWGPPGR Trigger: CCTCCCTGGAGGCCCCCAGGCCCGGCCCAAACCCCAGTCCCAACGTGGTGAACAAGCCCCTGCAGCGGGACT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000324436.5 ENST00000612068.1 |
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| CDS CCA 72 bp | CCGAGGTGGCGGGTTTCTTGGGCTGGCAGCCCAGGATaGTGGCCACGGTGTAGGTGGGGCTGGCCTGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: PRWRVSWAGSPG*WPRCRWGWPAQ Trigger: CTGGGCAGGCCAGCCCCACCTACACCGTGGCCACCATCCTGGGCTGCCAGCCCAAGAAACCCGCCACCTCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000324436.5 ENST00000612068.1 |
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| CDS CCA 72 bp | AGGGTGGGTCGGAGAACAGCAGCGGGTGGTCGTGGGTaGCCACTCGGAGGTCGTGCTCCAGCAGGTGGCGCC | + |
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Preference number: 6 (lower is better) Translates to: RVGRRTAAGGRG*PLGGRAPAGGA Trigger: GGCGCCACCTGCTGGAGCACGACCTCCGAGTGGCCACCCACGACCACCCGCTGCTGTTCTCCGACCCACCCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000324436.5 ENST00000612068.1 |
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| CDS CCA 72 bp | GCCGGGCTGAAGGGTGGGTCGGAGAACAGCAGCGGGTaGTCGTGGGTGGCCACTCGGAGGTCGTGCTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: AGLKGGSENSSG*SWVATRRSCSS Trigger: GCTGGAGCACGACCTCCGAGTGGCCACCCACGACCACCCGCTGCTGTTCTCCGACCCACCCTTCAGCCCGGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000324436.5 ENST00000612068.1 |
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| CDS CAA 90 bp | GGGGAGCGCAGCGACTCGAAGGCCACCTCCACTAGCTTCTCGCGGTaGGTGGCCGGGCTGAAGGGTGGGTCGGAGAACAGCAGCGGGTGG | + |
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Preference number: 6 (lower is better) Translates to: GERSDSKATSTSFSR*VAGLKGGSENSSGW Trigger: CCACCCGCTGCTGTTCTCCGACCCACCCTTCAGCCCGGCCACCAACCGCGAGAAGCTAGTGGAGGTGGCCTTCGAGTCGCTGCGCTCCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000324436.5 ENST00000612068.1 |
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| CDS TCA 72 bp | CCACTCGGAGGTCGTGCTCCAGCAGGTGGCGCCAGATaGGCTCGGCGGCATCCCAGTCCACGACGATGCCGC | + |
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Preference number: 6 (lower is better) Translates to: PLGGRAPAGGAR*ARRHPSPRRCR Trigger: GCGGCATCGTCGTGGACTGGGATGCCGCCGAGCTCATCTGGCGCCACCTGCTGGAGCACGACCTCCGAGTGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000324436.5 ENST00000612068.1 |
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| CDS GCA 72 bp | TCTGGGAGCACGCGGGCTGCCTCGCCGATGAACGTCTaGAGCCCGGACTGCCCCGAGGTGGCGGGTTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: SGSTRAASPMNV*SPDCPEVAGFL Trigger: CAAGAAACCCGCCACCTCGGGGCAGTCCGGGCTGCAGACGTTCATCGGCGAGGCAGCCCGCGTGCTCCCAGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000324436.5 ENST00000612068.1 |
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| CDS CCA 72 bp | TCTGCAGCCCGGACTGCCCCGAGGTGGCGGGTTTCTTaGGCTGGCAGCCCAGGATGGTGGCCACGGTGTAGG | + |
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Preference number: 6 (lower is better) Translates to: SAARTAPRWRVS*AGSPGWWPRCR Trigger: CCTACACCGTGGCCACCATCCTGGGCTGCCAGCCCAAGAAACCCGCCACCTCGGGGCAGTCCGGGCTGCAGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000324436.5 ENST00000612068.1 |
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| CDS CCA 72 bp | GATGCCGCTGCGCAGGGGTTGCACCAGCGTCAGCTCTaGGAGCACGCGGGCTGCCTCGCCGATGAACGTCTG | + |
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Preference number: 6 (lower is better) Translates to: DAAAQGLHQRQL*EHAGCLADERL Trigger: CAGACGTTCATCGGCGAGGCAGCCCGCGTGCTCCCAGAGCTGACGCTGGTGCAACCCCTGCGCAGCGGCATC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000324436.5 ENST00000612068.1 |
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| CDS GCA 72 bp | GGAGCAGCATCTCCGCCAGGAAGGCGGTCAGGTTGTTaGCCGCCAGGTCCAGACGCTCCGTGGCGTGGAGCA | + |
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Preference number: 6 (lower is better) Translates to: GAASPPGRRSGC*PPGPDAPWRGA Trigger: TGCTCCACGCCACGGAGCGTCTGGACCTGGCGGGCAACAACCTGACCGCCTTCCTGGCGGAGATGCTGCTCC 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000324436.5 ENST00000612068.1 |
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| CDS CCA 72 bp | GGGTTTGGGCCGGGCCTGGGGGCCTCCAGGGAGGACTaGGATTCCGAGGACTTGGGGCGACTTGCATCCATG | + |
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Preference number: 6 (lower is better) Translates to: GFGPGLGASRED*DSEDLGRLASM Trigger: CATGGATGCAAGTCGCCCCAAGTCCTCGGAATCCCAGTCCTCCCTGGAGGCCCCCAGGCCCGGCCCAAACCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000324436.5 ENST00000612068.1 |
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| CDS CCA 72 bp | CTGAAGGGTGGGTCGGAGAACAGCAGCGGGTGGTCGTaGGTGGCCACTCGGAGGTCGTGCTCCAGCAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: LKGGSENSSGWS*VATRRSCSSRW Trigger: CCACCTGCTGGAGCACGACCTCCGAGTGGCCACCCACGACCACCCGCTGCTGTTCTCCGACCCACCCTTCAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000324436.5 ENST00000612068.1 |
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| CDS CCA 72 bp | TGGGGGCCTCCAGGGAGGACTGGGATTCCGAGGACTTaGGGCGACTTGCATCCATGGTTGCGGGACGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: WGPPGRTGIPRT*GDLHPWLRDAR Trigger: CCTGGCGTCCCGCAACCATGGATGCAAGTCGCCCCAAGTCCTCGGAATCCCAGTCCTCCCTGGAGGCCCCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000324436.5 |
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| CDS CCA 72 bp | TGTGCCCATGTCAATAACCACCGCGCCGGTCTTTGGTaGCAGCCTGTCGGCCACCATGCCGGGGGAGTCCCG | + |
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Preference number: 6 (lower is better) Translates to: CAHVNNHRAGLW*QPVGHHAGGVP Trigger: CGGGACTCCCCCGGCATGGTGGCCGACAGGCTGCCACCAAAGACCGGCGCGGTGGTTATTGACATGGGCACA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000324436.5 ENST00000612068.1 |
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| CDS CCA 72 bp | GCCTGTGCCCATGTCAATAACCACCGCGCCGGTCTTTaGTGGCAGCCTGTCGGCCACCATGCCGGGGGAGTC | + |
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Preference number: 6 (lower is better) Translates to: ACAHVNNHRAGL*WQPVGHHAGGV Trigger: GACTCCCCCGGCATGGTGGCCGACAGGCTGCCACCAAAGACCGGCGCGGTGGTTATTGACATGGGCACAGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000324436.5 ENST00000612068.1 |
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| CDS CAA 72 bp | CTGGGGGCCTCCAGGGAGGACTGGGATTCCGAGGACTaGGGGCGACTTGCATCCATGGTTGCGGGACGCCAG | + |
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Preference number: 6 (lower is better) Translates to: LGASREDWDSED*GRLASMVAGRQ Trigger: CTGGCGTCCCGCAACCATGGATGCAAGTCGCCCCAAGTCCTCGGAATCCCAGTCCTCCCTGGAGGCCCCCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000324436.5 |
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| CDS CAA 90 bp | GCCAAGTCCGCGCGCATCTCCAGTGACAACTTGCGGAGACTCTGCTaGGCCATGGTGGAGAGGCCGACGGGTGACAGCCCCGGGACCTCT | + |
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Preference number: 6 (lower is better) Translates to: AKSARISSDNLRRLC*AMVERPTGDSPGTS Trigger: AGAGGTCCCGGGGCTGTCACCCGTCGGCCTCTCCACCATGGCCAAGCAGAGTCTCCGCAAGTTGTCACTGGAGATGCGCGCGGACTTGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000324436.5 ENST00000612068.1 |
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| CDS GCA 72 bp | CAGGGAGGACTGGGATTCCGAGGACTTGGGGCGACTTaGATCCATGGTTGCGGGACGCCAGGTGAGGGGGCT | + |
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Preference number: 6 (lower is better) Translates to: QGGLGFRGLGAT*IHGCGTPGEGA Trigger: AGCCCCCTCACCTGGCGTCCCGCAACCATGGATGCAAGTCGCCCCAAGTCCTCGGAATCCCAGTCCTCCCTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000324436.5 |
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| CDS CCA 72 bp | GGCAGCCCAGGATGGTGGCCACGGTGTAGGTGGGGCTaGCCTGCCCAGCAAAACCTACCTTACAGGTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: GSPGWWPRCRWG*PAQQNLPYRCL Trigger: CAGGCACCTGTAAGGTAGGTTTTGCTGGGCAGGCCAGCCCCACCTACACCGTGGCCACCATCCTGGGCTGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000324436.5 ENST00000612068.1 |
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| CDS CCA 72 bp | TGGGCTGGCAGCCCAGGATGGTGGCCACGGTGTAGGTaGGGCTGGCCTGCCCAGCAAAACCTACCTTACAGG | + |
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Preference number: 6 (lower is better) Translates to: WAGSPGWWPRCR*GWPAQQNLPYR Trigger: CCTGTAAGGTAGGTTTTGCTGGGCAGGCCAGCCCCACCTACACCGTGGCCACCATCCTGGGCTGCCAGCCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000324436.5 ENST00000612068.1 |
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| CDS CCA 72 bp | CCAGTGACAACTTGCGGAGACTCTGCTTGGCCATGGTaGAGAGGCCGACGGGTGACAGCCCCGGGACCTCTG | + |
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Preference number: 6 (lower is better) Translates to: PVTTCGDSAWPW*RGRRVTAPGPL Trigger: CAGAGGTCCCGGGGCTGTCACCCGTCGGCCTCTCCACCATGGCCAAGCAGAGTCTCCGCAAGTTGTCACTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000324436.5 ENST00000612068.1 |
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| CDS CCA 72 bp | GAGCCCCCGATCCATACGGAGAAATTCCTGGTGGGCTaGGCAGCCACCACCACGTGGGTCTCGGCTGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: EPPIHTEKFLVG*AATTTWVSAGR Trigger: TCTGCCAGCCGAGACCCACGTGGTGGTGGCTGCCCAGCCCACCAGGAATTTCTCCGTATGGATCGGGGGCTC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000324436.5 ENST00000612068.1 |
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| CDS CAA 72 bp | AGCGACTCGAAGGCCACCTCCACTAGCTTCTCGCGGTaGGTGGCCGGGCTGAAGGGTGGGTCGGAGAACAGC | + |
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Preference number: 6 (lower is better) Translates to: SDSKATSTSFSR*VAGLKGGSENS Trigger: GCTGTTCTCCGACCCACCCTTCAGCCCGGCCACCAACCGCGAGAAGCTAGTGGAGGTGGCCTTCGAGTCGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000324436.5 ENST00000612068.1 |
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| CDS CAA 72 bp | GCGCGCATCTCCAGTGACAACTTGCGGAGACTCTGCTaGGCCATGGTGGAGAGGCCGACGGGTGACAGCCCC | + |
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Preference number: 6 (lower is better) Translates to: ARISSDNLRRLC*AMVERPTGDSP Trigger: GGGGCTGTCACCCGTCGGCCTCTCCACCATGGCCAAGCAGAGTCTCCGCAAGTTGTCACTGGAGATGCGCGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000324436.5 ENST00000612068.1 |
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| CDS TCA 72 bp | GCAGCAGCTCTGCCCGGAAGCGACCCTCGAAGCCGGTaGAGAGCGAGGACCCACCGCAGAGAAGCACGTTTT | + |
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Preference number: 6 (lower is better) Translates to: AAALPGSDPRSR*RARTHRREARF Trigger: AAAACGTGCTTCTCTGCGGTGGGTCCTCGCTCTTCACCGGCTTCGAGGGTCGCTTCCGGGCAGAGCTGCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000324436.5 ENST00000612068.1 |
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| CDS GCA 72 bp | TCCGCGCGCATCTCCAGTGACAACTTGCGGAGACTCTaGTTGGCCATGGTGGAGAGGCCGACGGGTGACAGC | + |
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Preference number: 6 (lower is better) Translates to: SARISSDNLRRL*LAMVERPTGDS Trigger: GCTGTCACCCGTCGGCCTCTCCACCATGGCCAAGCAGAGTCTCCGCAAGTTGTCACTGGAGATGCGCGCGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000324436.5 ENST00000612068.1 |
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| CDS CAA 90 bp | AGAAGCACGTTTTGGGCCAAGTCCGCGCGCATCTCCAGTGACAACTaGCGGAGACTCTGCTTGGCCATGGTGGAGAGGCCGACGGGTGAC | + |
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Preference number: 6 (lower is better) Translates to: RSTFWAKSARISSDN*RRLCLAMVERPTGD Trigger: GTCACCCGTCGGCCTCTCCACCATGGCCAAGCAGAGTCTCCGCAAGTTGTCACTGGAGATGCGCGCGGACTTGGCCCAAAACGTGCTTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000324436.5 ENST00000612068.1 |
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| CDS GCA 72 bp | TTTGGGCCAAGTCCGCGCGCATCTCCAGTGACAACTTaGGGAGACTCTGCTTGGCCATGGTGGAGAGGCCGA | + |
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Preference number: 6 (lower is better) Translates to: FGPSPRASPVTT*GDSAWPWWRGR Trigger: TCGGCCTCTCCACCATGGCCAAGCAGAGTCTCCGCAAGTTGTCACTGGAGATGCGCGCGGACTTGGCCCAAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000324436.5 ENST00000612068.1 |
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| CDS CAA 72 bp | TTTTGGGCCAAGTCCGCGCGCATCTCCAGTGACAACTaGCGGAGACTCTGCTTGGCCATGGTGGAGAGGCCG | + |
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Preference number: 6 (lower is better) Translates to: FWAKSARISSDN*RRLCLAMVERP Trigger: CGGCCTCTCCACCATGGCCAAGCAGAGTCTCCGCAAGTTGTCACTGGAGATGCGCGCGGACTTGGCCCAAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000324436.5 ENST00000612068.1 |
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| CDS CCA 72 bp | GTGAAGAGCGAGGACCCACCGCAGAGAAGCACGTTTTaGGCCAAGTCCGCGCGCATCTCCAGTGACAACTTG | + |
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Preference number: 6 (lower is better) Translates to: VKSEDPPQRSTF*AKSARISSDNL Trigger: CAAGTTGTCACTGGAGATGCGCGCGGACTTGGCCCAAAACGTGCTTCTCTGCGGTGGGTCCTCGCTCTTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000324436.5 ENST00000612068.1 |
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| CDS TCA 72 bp | AAGCACGTTTTGGGCCAAGTCCGCGCGCATCTCCAGTaGCAACTTGCGGAGACTCTGCTTGGCCATGGTGGA | + |
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Preference number: 6 (lower is better) Translates to: KHVLGQVRAHLQ*QLAETLLGHGG Trigger: TCCACCATGGCCAAGCAGAGTCTCCGCAAGTTGTCACTGGAGATGCGCGCGGACTTGGCCCAAAACGTGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000324436.5 ENST00000612068.1 |
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| CDS GCA 72 bp | CACGCCCTCCCCAGCTCTGCCCTGGTCAGTAGCATTTaGGGTACACGATATAGGGACCCTGTTCCTCGTACT | + |
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Preference number: 6 (lower is better) Translates to: HALPSSALVSSI*GTRYRDPVPRT Trigger: AGTACGAGGAACAGGGTCCCTATATCGTGTACCGCAAATGCTACTGACCAGGGCAGAGCTGGGGAGGGCGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000324436.5 |
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