Pregenerated sensors for ACTA2 (Homo sapiens)
Ensembl gene IDs: ENSG00000107796Ensembl transcript IDs: ENST00000224784.10, ENST00000415557.1, ENST00000458159.5, ENST00000480297.5, ENST00000482085.1, ENST00000488967.5
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | GAAGGCATAATTCCACAGGACATTCACAGTTGTGTGCTAGAGACAGAGAGGAGCCTGACAGTGCTTGGCTaGGCTGCTCCACACTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: EGIIPQDIHSCVLETERSLTVLG*AAPHWV Trigger: CACCCAGTGTGGAGCAGCCCAGCCAAGCACTGTCAG...GCTCCTCTCTGTCTCTAGCACACAACTGTGAATGTCCTGTGGAATTATGCCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000224784.10 |
||
| CDS-3UTR TCA 90 bp | GAAGGCATAATTCCACAGGACATTCACAGTTGTGTGCTAGAGACAGAGAGGAGCGCTTCACAGGATTCCTaGCAGTGCTTGGCTGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EGIIPQDIHSCVLETERSASQDS*QCLAGL Trigger: CAGCCCAGCCAAGCACTGTCAGGAATCCTGTGAAGC...GCTCCTCTCTGTCTCTAGCACACAACTGTGAATGTCCTGTGGAATTATGCCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000224784.10 |
||
| CDS-3UTR GCA 90 bp | GAAGGCATAATTCCACAGGACATTCACAGTTGTGTGCTAGAGACAGAGAGGAGCTCCTCTTTTGCTCTGTaGTTCGTCACCCACGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: EGIIPQDIHSCVLETERSSSFAL*FVTHVA Trigger: AGCTACGTGGGTGACGAAGCACAGAGCAAAAGAGGA...GCTCCTCTCTGTCTCTAGCACACAACTGTGAATGTCCTGTGGAATTATGCCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000224784.10 |
||
| CDS-3UTR GCA 90 bp | AAAAGAACTGAAGGCATAATTCCACAGGACATTCACAGTTGTGTGCTAGAGACAAGTGCTTGGCTGGGCTaGTCCACACTGGGTGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KRTEGIIPQDIHSCVLETSAWLG*STLGGV Trigger: AACACCACCCAGTGTGGAGCAGCCCAGCCAAGCACT...TGTCTCTAGCACACAACTGTGAATGTCCTGTGGAATTATGCCTTCAGTTCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000224784.10 |
||
| CDS-3UTR CCA 90 bp | TGGAAAAGAACTGAAGGCATAATTCCACAGGACATTCACAGTTGTGTGCTAGAGATGGGAAAACAGCCCTaGGAGCATCGTCCCCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: WKRTEGIIPQDIHSCVLEMGKQP*EHRPQQ Trigger: TTGCTGGGGACGATGCTCCCAGGGCTGTTTTCCCAT...CTCTAGCACACAACTGTGAATGTCCTGTGGAATTATGCCTTCAGTTCTTTTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000224784.10 |
||
| CDS-3UTR TCA 90 bp | GGAATGATTTGGAAAAGAACTGAAGGCATAATTCCACAGGACATTCACAGTTGTCAGACTCCATCCCGATaGAGGATGGCTGGAACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GMIWKRTEGIIPQDIHSCQTPSR*RMAGTG Trigger: CCCTGTTCCAGCCATCCTTCATCGGGATGGAGTCTG...ACAACTGTGAATGTCCTGTGGAATTATGCCTTCAGTTCTTTTCCAAATCATTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000224784.10 |
||
| CDS-3UTR GCA 90 bp | ACTGAAGGCATAATTCCACAGGACATTCACAGTTGTGTGCTAGAGACAGAGAGGACACATAGCTGGAGCTaGTTCACAGGATTCCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: TEGIIPQDIHSCVLETERTHSWS*FTGFLT Trigger: TGTCAGGAATCCTGTGAAGCAGCTCCAGCTATGTGT...CCTCTCTGTCTCTAGCACACAACTGTGAATGTCCTGTGGAATTATGCCTTCAGT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000224784.10 |
||
| CDS-3UTR CCA 90 bp | AAAAGAACTGAAGGCATAATTCCACAGGACATTCACAGTTGTGTGCTAGAGACATGGGACGTCCCACAATaGATGGGAAAACAGCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KRTEGIIPQDIHSCVLETWDVPQ*MGKQPW Trigger: CCAGGGCTGTTTTCCCATCCATTGTGGGACGTCCCA...TGTCTCTAGCACACAACTGTGAATGTCCTGTGGAATTATGCCTTCAGTTCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000224784.10 |
||
| CDS-3UTR TCA 90 bp | AGAACTGAAGGCATAATTCCACAGGACATTCACAGTTGTGTGCTAGAGACAGAGAACACAGTTTCTCCTTaGTGTCCCGGACAATCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RTEGIIPQDIHSCVLETENTVSP*CPGQSH Trigger: GTGAGATTGTCCGGGACATCAAGGAGAAACTGTGTT...CTCTGTCTCTAGCACACAACTGTGAATGTCCTGTGGAATTATGCCTTCAGTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000224784.10 |
||
| CDS-3UTR CCA 90 bp | AGAACTGAAGGCATAATTCCACAGGACATTCACAGTTGTGTGCTAGAGACAGAGTTCTTCACACATAGCTaGAGCTGCTTCACAGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: RTEGIIPQDIHSCVLETEFFTHS*SCFTGF Trigger: GAATCCTGTGAAGCAGCTCCAGCTATGTGTGAAGAA...CTCTGTCTCTAGCACACAACTGTGAATGTCCTGTGGAATTATGCCTTCAGTTCT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000224784.10 |
||
| CDS-3UTR CCA 90 bp | GGAATGATTTGGAAAAGAACTGAAGGCATAATTCCACAGGACATTCACAGTTGTCTGGAACAGGGTCTCTaGGCAGCGGAAACGTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: GMIWKRTEGIIPQDIHSCLEQGL*AAETFI Trigger: AATGAACGTTTCCGCTGCCCAGAGACCCTGTTCCAG...ACAACTGTGAATGTCCTGTGGAATTATGCCTTCAGTTCTTTTCCAAATCATTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000224784.10 |
||
| CDS-3UTR GCA 90 bp | GGAATGATTTGGAAAAGAACTGAAGGCATAATTCCACAGGACATTCACAGTTGTCACACACCAAGGCAGTaGTGTCCTCTTCTTCACACA | + |
|
Preference number: 4 (lower is better) Translates to: GMIWKRTEGIIPQDIHSCHTPRQ*CPLLHT Trigger: TGTGTGAAGAAGAGGACAGCACTGCCTTGGTGTGTG...ACAACTGTGAATGTCCTGTGGAATTATGCCTTCAGTTCTTTTCCAAATCATTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000224784.10 |
||
| CDS-3UTR GCA 90 bp | AAAAGAACTGAAGGCATAATTCCACAGGACATTCACAGTTGTGTGCTAGAGACATCAGGATTCCTCTTTTaGTCTGTGCTTCGTCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: KRTEGIIPQDIHSCVLETSGFLF*SVLRHP Trigger: TGGGTGACGAAGCACAGAGCAAAAGAGGAATCCTGA...TGTCTCTAGCACACAACTGTGAATGTCCTGTGGAATTATGCCTTCAGTTCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000224784.10 |
||
| CDS-3UTR CCA 90 bp | ACTGAAGGCATAATTCCACAGGACATTCACAGTTGTGTGCTAGAGACAGAGAGGAACGAGTCAGAGCTTTaGCTAGGAATGATTTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TEGIIPQDIHSCVLETERNESEL*LGMIWK Trigger: TTTCCAAATCATTCCTAGCCAAAGCTCTGACTCGTT...CCTCTCTGTCTCTAGCACACAACTGTGAATGTCCTGTGGAATTATGCCTTCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000224784.10 |
||
| CDS GCA 90 bp | CCCGGGGATAGGCAAAGTGGGGCGGGCGCGGGACGCGTGCGGGATTaGGGCGGCAGCGGCGCACGCGGGCACCTGGGAGCGGCGGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PGDRQSGAGAGRVRD*GGSGARGHLGAAGC Trigger: GCAGCCCGCCGCTCCCAGGTGCCCGCGTGCGCCGCTGCCGCCGCAATCCCGCACGCGTCCCGCGCCCGCCCCACTTTGCCTATCCCCGGG 80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000415557.1 |
||
| CDS TCA 90 bp | GGCGGGGCAGCTCCGGCGCTCCTCGGAGACCACTGCGCTCCACGTTaGGGTGGGCGTGGGGTGCGGACAGGAATTGAAGCGGAAGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GGAAPALLGDHCAPR*GGRGVRTGIEAEVW Trigger: CCAGACTTCCGCTTCAATTCCTGTCCGCACCCCACGCCCACCTCAACGTGGAGCGCAGTGGTCTCCGAGGAGCGCCGGAGCTGCCCCGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000415557.1 ENST00000458159.5 |
||
| CDS TCA 90 bp | CCACTGCGCTCCACGTTGAGGTGGGCGTGGGGTGCGGACAGGAATTaGAGCGGAAGTCTGGGAAGCTTTAGGGTCGCTGGAGGGGGACCC | + |
|
Preference number: 5 (lower is better) Translates to: PLRSTLRWAWGADRN*SGSLGSFRVAGGGP Trigger: GGGTCCCCCTCCAGCGACCCTAAAGCTTCCCAGACTTCCGCTTCAATTCCTGTCCGCACCCCACGCCCACCTCAACGTGGAGCGCAGTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000415557.1 ENST00000458159.5 |
||
| CDS CCA 90 bp | GCGGAAGTCTGGGAAGCTTTAGGGTCGCTGGAGGGGGACCCCGGTTaGAGAGAGGAGCGGAACTCCTGGACAAGCCCTGACAAGCCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: AEVWEALGSLEGDPG*REERNSWTSPDKPS Trigger: GCTTGGCTTGTCAGGGCTTGTCCAGGAGTTCCGCTCCTCTCTCCAACCGGGGTCCCCCTCCAGCGACCCTAAAGCTTCCCAGACTTCCGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000415557.1 |
||
| CDS GCA 90 bp | GAGACTGGCTCCCGGGGGCTGTTAGGACCTTCCCTCAGGCCCGGGTaGTCAGAACGCTGGAGGACTTGCTTTTCTTGGGCCTTGATGCGA | + |
|
Preference number: 5 (lower is better) Translates to: ETGSRGLLGPSLRPG*SERWRTCFSWALMR Trigger: TCGCATCAAGGCCCAAGAAAAGCAAGTCCTCCAGCGTTCTGAGCACCCGGGCCTGAGGGAAGGTCCTAACAGCCCCCGGGAGCCAGTCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000415557.1 ENST00000458159.5 |
||
| CDS CCA 90 bp | CGGGGGCTGTTAGGACCTTCCCTCAGGCCCGGGTGCTCAGAACGCTaGAGGACTTGCTTTTCTTGGGCCTTGATGCGAAGTGCTGACCCC | + |
|
Preference number: 5 (lower is better) Translates to: RGLLGPSLRPGCSER*RTCFSWALMRSADP Trigger: GGGGTCAGCACTTCGCATCAAGGCCCAAGAAAAGCAAGTCCTCCAGCGTTCTGAGCACCCGGGCCTGAGGGAAGGTCCTAACAGCCCCCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000415557.1 ENST00000458159.5 |
||
| CDS GCA 90 bp | TTAGGACCTTCCCTCAGGCCCGGGTGCTCAGAACGCTGGAGGACTTaGTTTTCTTGGGCCTTGATGCGAAGTGCTGACCCCGCTGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LGPSLRPGCSERWRT*FSWALMRSADPAGQ Trigger: CTGCCCAGCGGGGTCAGCACTTCGCATCAAGGCCCAAGAAAAGCAAGTCCTCCAGCGTTCTGAGCACCCGGGCCTGAGGGAAGGTCCTAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000415557.1 ENST00000458159.5 |
||
| CDS TCA 90 bp | CATCCCATCATCTCCTTGGATAGTGAGGATGGTCCTGGAAGTTACTaGGCAACACACTGCTCCCCTCTCCCCCTTATCTCCCACAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: HPIISLDSEDGPGSY*ATHCSPLPLISHRP Trigger: AGGCCTGTGGGAGATAAGGGGGAGAGGGGAGCAGTGTGTTGCTCAGTAACTTCCAGGACCATCCTCACTATCCAAGGAGATGATGGGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000480297.5 |
||
| CDS TCA 90 bp | AGTAGTGTGGTGTTCTGTATCAGAGAACACAGGGATTATGCATCCTaGGGGCCCAAGCTGCAGCAAACCTCCCATACCTTTTCCATGTCG | + |
|
Preference number: 5 (lower is better) Translates to: SSVVFCIREHRDYAS*GPKLQQTSHTFSMS Trigger: CGACATGGAAAAGGTATGGGAGGTTTGCTGCAGCTTGGGCCCTCAGGATGCATAATCCCTGTGTTCTCTGATACAGAACACCACACTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000488967.5 |
||
| CDS CCA 90 bp | AGAGCCAGGCCTTGCCATTTGCAAAACTTCATCCCATCATCTCCTTaGATAGTGAGGATGGTCCTGGAAGTTACTGAGCAACACACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: RARPCHLQNFIPSSP*IVRMVLEVTEQHTA Trigger: AGCAGTGTGTTGCTCAGTAACTTCCAGGACCATCCTCACTATCCAAGGAGATGATGGGATGAAGTTTTGCAAATGGCAAGGCCTGGCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000480297.5 |
||
| CDS CCA 90 bp | AGTACAGTTGAGCAATGTGAGCCAGTTATTTCCCCAGCAGTAGTGTaGTGTTCTGTATCAGAGAACACAGGGATTATGCATCCTGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: STVEQCEPVISPAVV*CSVSENTGIMHPEG Trigger: GCCCTCAGGATGCATAATCCCTGTGTTCTCTGATACAGAACACCACACTACTGCTGGGGAAATAACTGGCTCACATTGCTCAACTGTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488967.5 |
||
| CDS-3UTR CAA 90 bp | CACATAGGTAACGAGTCAGAGCTTTGGCTAGGAATGATTTGGAAAAGAACTGAAGTCAGGATTCCTCTTTaGCTCTGTGCTTCGTCACCC | + |
|
Preference number: 5 (lower is better) Translates to: HIGNESELWLGMIWKRTEVRIPL*LCASSP Trigger: GGGTGACGAAGCACAGAGCAAAAGAGGAATCCTGAC...TTCAGTTCTTTTCCAAATCATTCCTAGCCAAAGCTCTGACTCGTTACCTATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000224784.10 |
||
| CDS-3UTR CAA 90 bp | AGAACTGAAGGCATAATTCCACAGGACATTCACAGTTGTGTGCTAGAGACAGAGACAGGACATTCACAGTaGTGTGCTAGAGACAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: RTEGIIPQDIHSCVLETETGHSQ*CARDRE Trigger: CTCTCTGTCTCTAGCACACAACTGTGAATGTCCTGT...CTCTGTCTCTAGCACACAACTGTGAATGTCCTGTGGAATTATGCCTTCAGTTCT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000224784.10 |
||
| CDS CCA 90 bp | TGCATTTGGTATCGATGCTTGCTTTCATCTAACATCAGCCCTGTATaGTTAAGTGACCTGGACTTTTATTTTAGTTTCTTTCCAAACAGT | + |
|
Preference number: 5 (lower is better) Translates to: CIWYRCLLSSNISPV*LSDLDFYFSFFPNS Trigger: ACTGTTTGGAAAGAAACTAAAATAAAAGTCCAGGTCACTTAACCATACAGGGCTGATGTTAGATGAAAGCAAGCATCGATACCAAATGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000482085.1 |
||
| CDS CCA 90 bp | ACCTTAATCATTAGAGGTCTATTTGTAACAAGGTTACATAACTTCTaGGCAGAAAGAGATAGACAATCTGGGGATAAACATGAACACAGA | + |
|
Preference number: 5 (lower is better) Translates to: TLIIRGLFVTRLHNF*AERDRQSGDKHEHR Trigger: TCTGTGTTCATGTTTATCCCCAGATTGTCTATCTCTTTCTGCCCAGAAGTTATGTAACCTTGTTACAAATAGACCTCTAATGATTAAGGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482085.1 |
||
| CDS GCA 72 bp | AGGCAAAGTGGGGCGGGCGCGGGACGCGTGCGGGATTaGGGCGGCAGCGGCGCACGCGGGCACCTGGGAGCG | + |
|
Preference number: 6 (lower is better) Translates to: RQSGAGAGRVRD*GGSGARGHLGA Trigger: CGCTCCCAGGTGCCCGCGTGCGCCGCTGCCGCCGCAATCCCGCACGCGTCCCGCGCCCGCCCCACTTTGCCT 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000415557.1 |
||
| CDS CAA 90 bp | CGGCGCACGCGGGCACCTGGGAGCGGCGGGCTGCTGCGGGAGGCGTaGGAGACTGGCTCCCGGGGGCTGTTAGGACCTTCCCTCAGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: RRTRAPGSGGLLREA*ETGSRGLLGPSLRP Trigger: GGGCCTGAGGGAAGGTCCTAACAGCCCCCGGGAGCCAGTCTCCAACGCCTCCCGCAGCAGCCCGCCGCTCCCAGGTGCCCGCGTGCGCCG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000415557.1 |
||
| CDS CCA 72 bp | TGGGAGCGGCGGGCTGCTGCGGGAGGCGTTGGAGACTaGCTCCCGGGGGCTGTTAGGACCTTCCCTCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: WERRAAAGGVGD*LPGAVRTFPQA Trigger: GGCCTGAGGGAAGGTCCTAACAGCCCCCGGGAGCCAGTCTCCAACGCCTCCCGCAGCAGCCCGCCGCTCCCA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000415557.1 ENST00000458159.5 |
||
| CDS GCA 72 bp | CTGGAGCTGCTTCACAGGATTCTGGGAGCGGCGGGCTaGTGCGGGAGGCGTTGGAGACTGGCTCCCGGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: LELLHRILGAAG*CGRRWRLAPGG Trigger: GCCCCCGGGAGCCAGTCTCCAACGCCTCCCGCAGCAGCCCGCCGCTCCCAGAATCCTGTGAAGCAGCTCCAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000458159.5 |
||
| CDS GCA 72 bp | TCCCGGGGGCTGTTAGGACCTTCCCTCAGGCCCGGGTaGTCAGAACGCTGGAGGACTTGCTTTTCTTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SRGLLGPSLRPG*SERWRTCFSWA Trigger: GGCCCAAGAAAAGCAAGTCCTCCAGCGTTCTGAGCACCCGGGCCTGAGGGAAGGTCCTAACAGCCCCCGGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000415557.1 ENST00000458159.5 |
||
| CDS CCA 72 bp | TGGGAAGCTTTAGGGTCGCTGGAGGGGGACCCCGGTTaGAGAGAGGAGCGGAACTCCTGGACAAGCCCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: WEALGSLEGDPG*REERNSWTSPD Trigger: GTCAGGGCTTGTCCAGGAGTTCCGCTCCTCTCTCCAACCGGGGTCCCCCTCCAGCGACCCTAAAGCTTCCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000415557.1 |
||
| CDS CCA 72 bp | CCCGGGTGCTCAGAACGCTGGAGGACTTGCTTTTCTTaGGCCTTGATGCGAAGTGCTGACCCCGCTGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PGCSERWRTCFS*ALMRSADPAGQ Trigger: CTGCCCAGCGGGGTCAGCACTTCGCATCAAGGCCCAAGAAAAGCAAGTCCTCCAGCGTTCTGAGCACCCGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000415557.1 ENST00000458159.5 |
||
| CDS CAA 72 bp | TGCTCAGAACGCTGGAGGACTTGCTTTTCTTGGGCCTaGATGCGAAGTGCTGACCCCGCTGGGCAGGCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: CSERWRTCFSWA*MRSADPAGQAG Trigger: CCCCGCCTGCCCAGCGGGGTCAGCACTTCGCATCAAGGCCCAAGAAAAGCAAGTCCTCCAGCGTTCTGAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000415557.1 ENST00000458159.5 |
||
| CDS GCA 72 bp | GAGACCACTGCGCTCCACGTTGAGGTGGGCGTGGGGTaGGGACAGGAATTGAAGCGGAAGTCTGGGAAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: ETTALHVEVGVG*GQELKRKSGKL Trigger: AAGCTTCCCAGACTTCCGCTTCAATTCCTGTCCGCACCCCACGCCCACCTCAACGTGGAGCGCAGTGGTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000415557.1 ENST00000458159.5 |
||
| CDS GCA 72 bp | TCCCTCAGGCCCGGGTGCTCAGAACGCTGGAGGACTTaGTTTTCTTGGGCCTTGATGCGAAGTGCTGACCCC | + |
|
Preference number: 6 (lower is better) Translates to: SLRPGCSERWRT*FSWALMRSADP Trigger: GGGGTCAGCACTTCGCATCAAGGCCCAAGAAAAGCAAGTCCTCCAGCGTTCTGAGCACCCGGGCCTGAGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000415557.1 ENST00000458159.5 |
||
| CDS TCA 72 bp | TCCACGTTGAGGTGGGCGTGGGGTGCGGACAGGAATTaGAGCGGAAGTCTGGGAAGCTTTAGGGTCGCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: STLRWAWGADRN*SGSLGSFRVAG Trigger: TCCAGCGACCCTAAAGCTTCCCAGACTTCCGCTTCAATTCCTGTCCGCACCCCACGCCCACCTCAACGTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000415557.1 ENST00000458159.5 |
||
| CDS CCA 72 bp | TTAGGACCTTCCCTCAGGCCCGGGTGCTCAGAACGCTaGAGGACTTGCTTTTCTTGGGCCTTGATGCGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: LGPSLRPGCSER*RTCFSWALMRS Trigger: ACTTCGCATCAAGGCCCAAGAAAAGCAAGTCCTCCAGCGTTCTGAGCACCCGGGCCTGAGGGAAGGTCCTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000415557.1 ENST00000458159.5 |
||
| CDS GCA 72 bp | GGCAGTGCTGTCCTCTTCTTCACACATAGCTGGAGCTaGTTCACAGGATTCCTGACAGTGCTTGGCTGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: GSAVLFFTHSWS*FTGFLTVLGWA Trigger: AGCCCAGCCAAGCACTGTCAGGAATCCTGTGAAGCAGCTCCAGCTATGTGTGAAGAAGAGGACAGCACTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000224784.10 ENST00000482085.1 ENST00000488967.5 |
||
| CDS GCA 72 bp | GAGAACACAGGGATTATGCATCCTGAGGGCCCAAGCTaGAGCAAACCTCCCATACCTTTTCCATGTCGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: ENTGIMHPEGPS*SKPPIPFPCRP Trigger: GGGACGACATGGAAAAGGTATGGGAGGTTTGCTGCAGCTTGGGCCCTCAGGATGCATAATCCCTGTGTTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488967.5 |
||
| CDS TCA 72 bp | ATCTCCTTGGATAGTGAGGATGGTCCTGGAAGTTACTaGGCAACACACTGCTCCCCTCTCCCCCTTATCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ISLDSEDGPGSY*ATHCSPLPLIS Trigger: GGAGATAAGGGGGAGAGGGGAGCAGTGTGTTGCTCAGTAACTTCCAGGACCATCCTCACTATCCAAGGAGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000480297.5 |
||
| CDS TCA 72 bp | GTGTTCTGTATCAGAGAACACAGGGATTATGCATCCTaGGGGCCCAAGCTGCAGCAAACCTCCCATACCTTT | + |
|
Preference number: 6 (lower is better) Translates to: VFCIREHRDYAS*GPKLQQTSHTF Trigger: AAAGGTATGGGAGGTTTGCTGCAGCTTGGGCCCTCAGGATGCATAATCCCTGTGTTCTCTGATACAGAACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488967.5 |
||
| CDS CAA 90 bp | AGAAAGATGTGCTTTGCTCTGTGCATTAGAGCCAGGCCTTGCCATTaGCAAAACTTCATCCCATCATCTCCTTGGATAGTGAGGATGGTC | + |
|
Preference number: 6 (lower is better) Translates to: RKMCFALCIRARPCH*QNFIPSSPWIVRMV Trigger: GACCATCCTCACTATCCAAGGAGATGATGGGATGAAGTTTTGCAAATGGCAAGGCCTGGCTCTAATGCACAGAGCAAAGCACATCTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000480297.5 |
||
| CDS GCA 72 bp | AAGATGTGCTTTGCTCTGTGCATTAGAGCCAGGCCTTaGCATTTGCAAAACTTCATCCCATCATCTCCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: KMCFALCIRARP*HLQNFIPSSPW Trigger: CCAAGGAGATGATGGGATGAAGTTTTGCAAATGGCAAGGCCTGGCTCTAATGCACAGAGCAAAGCACATCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000480297.5 |
||
| CDS CAA 72 bp | TGCTTTGCTCTGTGCATTAGAGCCAGGCCTTGCCATTaGCAAAACTTCATCCCATCATCTCCTTGGATAGTG | + |
|
Preference number: 6 (lower is better) Translates to: CFALCIRARPCH*QNFIPSSPWIV Trigger: CACTATCCAAGGAGATGATGGGATGAAGTTTTGCAAATGGCAAGGCCTGGCTCTAATGCACAGAGCAAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000480297.5 |
||
| CDS CCA 72 bp | CCTTGCCATTTGCAAAACTTCATCCCATCATCTCCTTaGATAGTGAGGATGGTCCTGGAAGTTACTGAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: PCHLQNFIPSSP*IVRMVLEVTEQ Trigger: TTGCTCAGTAACTTCCAGGACCATCCTCACTATCCAAGGAGATGATGGGATGAAGTTTTGCAAATGGCAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000480297.5 |
||
| CDS CCA 72 bp | GAGCAATGTGAGCCAGTTATTTCCCCAGCAGTAGTGTaGTGTTCTGTATCAGAGAACACAGGGATTATGCAT | + |
|
Preference number: 6 (lower is better) Translates to: EQCEPVISPAVV*CSVSENTGIMH Trigger: ATGCATAATCCCTGTGTTCTCTGATACAGAACACCACACTACTGCTGGGGAAATAACTGGCTCACATTGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488967.5 |
||
| CDS GCA 72 bp | GGACATGAAAAAGGGGCAGACTTTGTATCTGATAGATaGCCATCAGATAATCTGTCTACATTATATGTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: GHEKGADFVSDR*PSDNLSTLYVK Trigger: TTTCACATATAATGTAGACAGATTATCTGATGGGCATCTATCAGATACAAAGTCTGCCCCTTTTTCATGTCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000482085.1 |
||
| CDS CCA 72 bp | ATTAGAGGTCTATTTGTAACAAGGTTACATAACTTCTaGGCAGAAAGAGATAGACAATCTGGGGATAAACAT | + |
|
Preference number: 6 (lower is better) Translates to: IRGLFVTRLHNF*AERDRQSGDKH Trigger: ATGTTTATCCCCAGATTGTCTATCTCTTTCTGCCCAGAAGTTATGTAACCTTGTTACAAATAGACCTCTAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482085.1 |
||
| CDS CCA 72 bp | TATCGATGCTTGCTTTCATCTAACATCAGCCCTGTATaGTTAAGTGACCTGGACTTTTATTTTAGTTTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: YRCLLSSNISPV*LSDLDFYFSFF Trigger: AAAGAAACTAAAATAAAAGTCCAGGTCACTTAACCATACAGGGCTGATGTTAGATGAAAGCAAGCATCGATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000482085.1 |
||
| CDS CCA 72 bp | TCTGTCTACATTATATGTGAAATTGGCATTTACTCCTaGACCTTAATCATTAGAGGTCTATTTGTAACAAGG | + |
|
Preference number: 6 (lower is better) Translates to: SVYIICEIGIYS*TLIIRGLFVTR Trigger: CCTTGTTACAAATAGACCTCTAATGATTAAGGTCCAGGAGTAAATGCCAATTTCACATATAATGTAGACAGA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482085.1 |
||