RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ACSS1 (Homo sapiens)

Ensembl gene IDs: ENSG00000154930

Ensembl transcript IDs: ENST00000323482.9, ENST00000376726.3, ENST00000432802.6, ENST00000484396.1, ENST00000537502.5

Found 715 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGAGAGAAACTGGCCCTTCGGGGAGTGCCATGGCTGGGCCCTCCCTaGCGGACCTCCAGGTGTCCAGTTAGCTCCTTAGCCCCCGACCCC +
Preference number: 1 (lower is better)
Translates to: GEKLALRGVPWLGPP*RTSRCPVSSLAPDP
Trigger: GGGGTCGGGGGCTAAGGAGCTAACTGGACACCTGGAGGTCCGGCAGGGAGGGCCCAGCCATGGCACTCCCCGAAGGGCCAGTTTCTCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376726.3
3UTR GCA 90 bp TCCAGCCCCGCTCACAGACCGAACCGCTACTTAGCACACACTCAGTaGTCCCACGGGCAGCGTCCAGCCGAGGGGGCGTGGCACACAACC +
Preference number: 1 (lower is better)
Translates to: SSPAHRPNRYLAHTQ*SHGQRPAEGAWHTT
Trigger: GGTTGTGTGCCACGCCCCCTCGGCTGGACGCTGCCCGTGGGAGCACTGAGTGTGTGCTAAGTAGCGGTTCGGTCTGTGAGCGGGGCTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376726.3
3UTR CCA 90 bp CTGCCCCAGGGTCCAGGCACACCTGAGAGACTGATGGAGAGAAACTaGCCCTTCGGGGAGTGCCATGGCTGGGCCCTCCCTGCCGGACCT +
Preference number: 1 (lower is better)
Translates to: LPQGPGTPERLMERN*PFGECHGWALPAGP
Trigger: AGGTCCGGCAGGGAGGGCCCAGCCATGGCACTCCCCGAAGGGCCAGTTTCTCTCCATCAGTCTCTCAGGTGTGCCTGGACCCTGGGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376726.3
3UTR TCA 90 bp GGCACACAACCTGCCTGCCCCAGGGTCCAGGCACACCTGAGAGACTaGTGGAGAGAAACTGGCCCTTCGGGGAGTGCCATGGCTGGGCCC +
Preference number: 1 (lower is better)
Translates to: GTQPACPRVQAHLRD*WRETGPSGSAMAGP
Trigger: GGGCCCAGCCATGGCACTCCCCGAAGGGCCAGTTTCTCTCCATCAGTCTCTCAGGTGTGCCTGGACCCTGGGGCAGGCAGGTTGTGTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376726.3
3UTR GCA 90 bp TGTTCGCAGGCAGATGGAGCTGGGCCCACCGTGGCGAGGGGCAGCTaGAGCAGCTTGGGTCTTCAGAGCCAAGCACACTCCAGTGTGCAG +
Preference number: 1 (lower is better)
Translates to: CSQADGAGPTVARGS*SSLGLQSQAHSSVQ
Trigger: CTGCACACTGGAGTGTGCTTGGCTCTGAAGACCCAAGCTGCTGCAGCTGCCCCTCGCCACGGTGGGCCCAGCTCCATCTGCCTGCGAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376726.3
3UTR CCA 90 bp AGGGCTCTCAGCCCAGCTTCACGTGAGGGCGGTGTGGGTCATGTGTaGGGTGGGGGCTGCTTCTGGGACGTAGGAAGACGCCAACCTCAG +
Preference number: 1 (lower is better)
Translates to: RALSPASREGGVGHV*GGGCFWDVGRRQPQ
Trigger: CTGAGGTTGGCGTCTTCCTACGTCCCAGAAGCAGCCCCCACCCCACACATGACCCACACCGCCCTCACGTGAAGCTGGGCTGAGAGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
3UTR CCA 90 bp CTCAGAAGGGGCTTTGTTCGCAGGCAGATGGAGCTGGGCCCACCGTaGCGAGGGGCAGCTGCAGCAGCTTGGGTCTTCAGAGCCAAGCAC +
Preference number: 1 (lower is better)
Translates to: LRRGFVRRQMELGPP*RGAAAAAWVFRAKH
Trigger: GTGCTTGGCTCTGAAGACCCAAGCTGCTGCAGCTGCCCCTCGCCACGGTGGGCCCAGCTCCATCTGCCTGCGAACAAAGCCCCTTCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376726.3
3UTR CCA 90 bp TCGCATAGCCTCTCCATGGGTGACACTCCTGGGACCTCCAATGGATaGGAGAAAGGGCTCTCAGCCCAGCTTCACGTGAGGGCGGTGTGG +
Preference number: 1 (lower is better)
Translates to: SHSLSMGDTPGTSNG*EKGLSAQLHVRAVW
Trigger: CCACACCGCCCTCACGTGAAGCTGGGCTGAGAGCCCTTTCTCCCATCCATTGGAGGTCCCAGGAGTGTCACCCATGGAGAGGCTATGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
3UTR CCA 90 bp TCAAGTTCCTTCTCAGAAGGGGCTTTGTTCGCAGGCAGATGGAGCTaGGCCCACCGTGGCGAGGGGCAGCTGCAGCAGCTTGGGTCTTCA +
Preference number: 1 (lower is better)
Translates to: SSSFSEGALFAGRWS*AHRGEGQLQQLGSS
Trigger: TGAAGACCCAAGCTGCTGCAGCTGCCCCTCGCCACGGTGGGCCCAGCTCCATCTGCCTGCGAACAAAGCCCCTTCTGAGAAGGAACTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376726.3
3UTR CCA 90 bp GACCACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTaGGCTTCACAGGTTCACTCACCCAAGAGGCCAGCACAACCACGA +
Preference number: 1 (lower is better)
Translates to: DHHSVFVYPAANTTS*ASQVHSPKRPAQPR
Trigger: TCGTGGTTGTGCTGGCCTCTTGGGTGAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
3UTR CCA 90 bp AGAGAGACTGGATCCAGACCTCCAAGTCTCATCATTGGACCTCAGTaGTTCTCACCGCCCCAACCACAGAGTGAAGGTCAGGCAGCGTTT +
Preference number: 1 (lower is better)
Translates to: RETGSRPPSLIIGPQ*FSPPQPQSEGQAAF
Trigger: AAACGCTGCCTGACCTTCACTCTGTGGTTGGGGCGGTGAGAACCACTGAGGTCCAATGATGAGACTTGGAGGTCTGGATCCAGTCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
3UTR CCA 90 bp GTCCTTAGCTTCCACAGGCTGGCTGTGGTCCTGAGAATTCTCACATaGTTTATGTTTAACCACACGTCTCCACAGGGCTCCAGCCCCGCT +
Preference number: 1 (lower is better)
Translates to: VLSFHRLAVVLRILT*FMFNHTSPQGSSPA
Trigger: AGCGGGGCTGGAGCCCTGTGGAGACGTGTGGTTAAACATAAACCATGTGAGAATTCTCAGGACCACAGCCAGCCTGTGGAAGCTAAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376726.3
3UTR TCA 90 bp TCTCATCATTGGACCTCAGTGGTTCTCACCGCCCCAACCACAGAGTaGAGGTCAGGCAGCGTTTGCCAGGATTTGGCTCTGACCAAGTTA +
Preference number: 1 (lower is better)
Translates to: SHHWTSVVLTAPTTE*RSGSVCQDLALTKL
Trigger: TAACTTGGTCAGAGCCAAATCCTGGCAAACGCTGCCTGACCTTCACTCTGTGGTTGGGGCGGTGAGAACCACTGAGGTCCAATGATGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
3UTR CCA 90 bp TCCCAGGGCCTCACCTTCCTGTGCTGGCTCAAGAGGGCAGAGGAATaGAGATGGCAATGCCTTTTCATTCCAGGAAACCAAACTCAGATG +
Preference number: 1 (lower is better)
Translates to: SQGLTFLCWLKRAEE*RWQCLFIPGNQTQM
Trigger: CATCTGAGTTTGGTTTCCTGGAATGAAAAGGCATTGCCATCTCCATTCCTCTGCCCTCTTGAGCCAGCACAGGAAGGTGAGGCCCTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
3UTR TCA 90 bp ATGGACCTGAAGCTGTCCTTAGCTTCCACAGGCTGGCTGTGGTCCTaGGAATTCTCACATGGTTTATGTTTAACCACACGTCTCCACAGG +
Preference number: 1 (lower is better)
Translates to: MDLKLSLASTGWLWS*EFSHGLCLTTRLHR
Trigger: CCTGTGGAGACGTGTGGTTAAACATAAACCATGTGAGAATTCTCAGGACCACAGCCAGCCTGTGGAAGCTAAGGACAGCTTCAGGTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376726.3
3UTR GCA 90 bp CATTATACACAACCAAGCACAGGAGAAACACTCACCAGGAAAAGATaGCGGAGGCTTGGAAGTTCTCAAGGGAACTGTTTAGACAGAGGT +
Preference number: 1 (lower is better)
Translates to: HYTQPSTGETLTRKR*RRLGSSQGNCLDRG
Trigger: ACCTCTGTCTAAACAGTTCCCTTGAGAACTTCCAAGCCTCCGGCATCTTTTCCTGGTGAGTGTTTCTCCTGTGCTTGGTTGTGTATAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
3UTR GCA 90 bp AAAATAAAGCTTTATTTGAACTCCCTCCCCTACAGATCATTCAGATaGCCGGGACCATGTCCAGGTTCCTCTCAGCAACATGGAAAGCTA +
Preference number: 1 (lower is better)
Translates to: KIKLYLNSLPYRSFR*PGPCPGSSQQHGKL
Trigger: TAGCTTTCCATGTTGCTGAGAGGAACCTGGACATGGTCCCGGGCATCTGAATGATCTGTAGGGGAGGGAGTTCAAATAAAGCTTTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
3UTR CCA 90 bp CACAAAAATCTTTCTGGATCACAGCTTGAAGAAACAGAACATAACTaGAGTAGCTTCAGAACTAAGGCGGCCACATTCACCCCACCGCTT +
Preference number: 1 (lower is better)
Translates to: HKNLSGSQLEETEHN*SSFRTKAATFTPPL
Trigger: AAGCGGTGGGGTGAATGTGGCCGCCTTAGTTCTGAAGCTACTCCAGTTATGTTCTGTTTCTTCAAGCTGTGATCCAGAAAGATTTTTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
3UTR CCA 90 bp AAGTCACCTGAGTTTCTAATAGCTTCCCTGAAGAACCCAACTATTTaGAGTATGTTGCCTCTCCTATCAAGAGGCATCTGGGGGCACAAA +
Preference number: 1 (lower is better)
Translates to: KSPEFLIASLKNPTI*SMLPLLSRGIWGHK
Trigger: TTTGTGCCCCCAGATGCCTCTTGATAGGAGAGGCAACATACTCCAAATAGTTGGGTTCTTCAGGGAAGCTATTAGAAACTCAGGTGACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
3UTR CCA 90 bp AACCCAACTATTTGGAGTATGTTGCCTCTCCTATCAAGAGGCATCTaGGGGCACAAAAATCTTTCTGGATCACAGCTTGAAGAAACAGAA +
Preference number: 1 (lower is better)
Translates to: NPTIWSMLPLLSRGI*GHKNLSGSQLEETE
Trigger: TTCTGTTTCTTCAAGCTGTGATCCAGAAAGATTTTTGTGCCCCCAGATGCCTCTTGATAGGAGAGGCAACATACTCCAAATAGTTGGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
3UTR-3UTR CCA 90 bp CAGGCAGATGGAGCTGGGCCCACCGTGGCGAGGGGCAGCTGCAGCAGCTTGGGTCGCTCAGTTGTCCAGTaGGGCCCGAGGATCCAGGGC +
Preference number: 2 (lower is better)
Translates to: QADGAGPTVARGSCSSLGRSVVQ*GPRIQG
Trigger: GCCCTGGATCCTCGGGCCCCACTGGACAACTGAGCG...ACCCAAGCTGCTGCAGCTGCCCCTCGCCACGGTGGGCCCAGCTCCATCTGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376726.3
3UTR-3UTR CCA 90 bp TGGAGCTGGGCCCACCGTGGCGAGGGGCAGCTGCAGCAGCTTGGGTCTTCAGAGTGTGCAGGGGCCACCTaGGGGGCCGCTCAGTTGTCC +
Preference number: 2 (lower is better)
Translates to: WSWAHRGEGQLQQLGSSECAGAT*GAAQLS
Trigger: GGACAACTGAGCGGCCCCCCAGGTGGCCCCTGCACA...CTCTGAAGACCCAAGCTGCTGCAGCTGCCCCTCGCCACGGTGGGCCCAGCTCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376726.3
3UTR-3UTR CCA 90 bp ATGGAGAGAAACTGGCCCTTCGGGGAGTGCCATGGCTGGGCCCTCCCTGCCGGAGCAGGCAGATGGAGCTaGGCCCACCGTGGCGAGGGG +
Preference number: 2 (lower is better)
Translates to: MERNWPFGECHGWALPAGAGRWS*AHRGEG
Trigger: CCCCTCGCCACGGTGGGCCCAGCTCCATCTGCCTGC...TCCGGCAGGGAGGGCCCAGCCATGGCACTCCCCGAAGGGCCAGTTTCTCTCCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376726.3
3UTR-3UTR GCA 90 bp TACTTAGCACACACTCAGTGCTCCCACGGGCAGCGTCCAGCCGAGGGGGCGTGGGTGGCGAGGGGCAGCTaGAGCAGCTTGGGTCTTCAG +
Preference number: 2 (lower is better)
Translates to: YLAHTQCSHGQRPAEGAWVARGS*SSLGLQ
Trigger: CTGAAGACCCAAGCTGCTGCAGCTGCCCCTCGCCAC...CCACGCCCCCTCGGCTGGACGCTGCCCGTGGGAGCACTGAGTGTGTGCTAAGTA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376726.3
3UTR-3UTR CCA 90 bp TGGGCTTCACAGGTTCACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGCACGTGAGGGCGGTGTaGGTCATGTGTGGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: WASQVHSPKRPAQPRPSGHVRAV*VMCGVG
Trigger: CCCCACCCCACACATGACCCACACCGCCCTCACGTG...CCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTGAACCTGTGAAGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
3UTR-3UTR GCA 90 bp CAGGTTCACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGTACTCAGTGAAGCCAGGGCTTGGGTaGCCGCCCATCCCAAGAGCC +
Preference number: 2 (lower is better)
Translates to: QVHSPKRPAQPRPSGYSVKPGLG*PPIPRA
Trigger: GGCTCTTGGGATGGGCGGGCACCCAAGCCCTGGCTT...CACTGAGTACCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTGAACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
3UTR-3UTR CCA 90 bp CCAGGGCCATTTCAGTGTCATGGACCTGAAGCTGTCCTTAGCTTCCACAGGCTGGGGGAGTGCCATGGCTaGGCCCTCCCTGCCGGACCT +
Preference number: 2 (lower is better)
Translates to: PGPFQCHGPEAVLSFHRLGECHG*ALPAGP
Trigger: AGGTCCGGCAGGGAGGGCCCAGCCATGGCACTCCCC...CAGCCTGTGGAAGCTAAGGACAGCTTCAGGTCCATGACACTGAAATGGCCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376726.3
3UTR-3UTR GCA 90 bp TGGGCTTCACAGGTTCACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGGGCCTCACCTTCCTGTaGTGGCTCAAGAGGGCAGAG +
Preference number: 2 (lower is better)
Translates to: WASQVHSPKRPAQPRPSGGLTFL*WLKRAE
Trigger: CTCTGCCCTCTTGAGCCAGCACAGGAAGGTGAGGCC...CCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTGAACCTGTGAAGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
3UTR-3UTR CCA 90 bp ACATGGTTTATGTTTAACCACACGTCTCCACAGGGCTCCAGCCCCGCTCACAGAGAGCTGGGCCCACCGTaGCGAGGGGCAGCTGCAGCA +
Preference number: 2 (lower is better)
Translates to: TWFMFNHTSPQGSSPAHRELGPP*RGAAAA
Trigger: TGCTGCAGCTGCCCCTCGCCACGGTGGGCCCAGCTC...TCTGTGAGCGGGGCTGGAGCCCTGTGGAGACGTGTGGTTAAACATAAACCATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376726.3
3UTR-3UTR TCA 90 bp CAGACCGAACCGCTACTTAGCACACACTCAGTGCTCCCACGGGCAGCGTCCAGCGCACACCTGAGAGACTaGTGGAGAGAAACTGGCCCT +
Preference number: 2 (lower is better)
Translates to: QTEPLLSTHSVLPRAASSAHLRD*WRETGP
Trigger: AGGGCCAGTTTCTCTCCATCAGTCTCTCAGGTGTGC...GCTGGACGCTGCCCGTGGGAGCACTGAGTGTGTGCTAAGTAGCGGTTCGGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376726.3
3UTR-3UTR GCA 90 bp ACCACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACAAGCCAGGGCTTGGGTaGCCGCCCATCCCAAGAGCC +
Preference number: 2 (lower is better)
Translates to: TTTQYLCTLQPTPPPGLHKPGLG*PPIPRA
Trigger: GGCTCTTGGGATGGGCGGGCACCCAAGCCCTGGCTT...GTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
3UTR-3UTR GCA 90 bp CAAAAGACCACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGTGGGCCTCCTTCCCCTaGCAACCGCCAGCCCCTGCA +
Preference number: 2 (lower is better)
Translates to: QKTTTQYLCTLQPTPPPGWASFP*QPPAPA
Trigger: TGCAGGGGCTGGCGGTTGGCAGGGGAAGGAGGCCCA...CCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTGGTCTTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
3UTR-3UTR CCA 90 bp TGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACAGGTTCACTCACCCAAGGTGTGGGTCATGTGTaGGGTGGGGGCTGCTTCTGG +
Preference number: 2 (lower is better)
Translates to: CVPCSQHHLLGFTGSLTQGVGHV*GGGCFW
Trigger: CCAGAAGCAGCCCCCACCCCACACATGACCCACACC...TTGGGTGAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
3UTR-3UTR TCA 90 bp TGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACAGGTTCACTCACCCAAACTGCCACAAGGCCCTaGAGGGTAGACTGTGGGGCA +
Preference number: 2 (lower is better)
Translates to: CVPCSQHHLLGFTGSLTQTATRP*RVDCGA
Trigger: TGCCCCACAGTCTACCCTTCAGGGCCTTGTGGCAGT...TTGGGTGAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
3UTR-3UTR CCA 90 bp GCCATGTCGCATAGCCTCTCCATGGGTGACACTCCTGGGACCTCCAATGGATGGCTCAGGGGTACCTTCTaGGAAGGACAAGCCAGGGCT +
Preference number: 2 (lower is better)
Translates to: AMSHSLSMGDTPGTSNGWLRGTF*EGQARA
Trigger: AGCCCTGGCTTGTCCTTCCCAGAAGGTACCCCTGAG...CCATCCATTGGAGGTCCCAGGAGTGTCACCCATGGAGAGGCTATGCGACATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
3UTR-3UTR CCA 90 bp CCAGGGCCATTTCAGTGTCATGGACCTGAAGCTGTCCTTAGCTTCCACAGGCTGTTGTTCGCAGGCAGATaGAGCTGGGCCCACCGTGGC +
Preference number: 2 (lower is better)
Translates to: PGPFQCHGPEAVLSFHRLLFAGR*SWAHRG
Trigger: GCCACGGTGGGCCCAGCTCCATCTGCCTGCGAACAA...CAGCCTGTGGAAGCTAAGGACAGCTTCAGGTCCATGACACTGAAATGGCCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376726.3
3UTR-3UTR GCA 90 bp CACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACAGGGCCTCACCTTCCTGTaGTGGCTCAAGAGGGCAGAG +
Preference number: 2 (lower is better)
Translates to: HHSVFVYPAANTTSWASQGLTFL*WLKRAE
Trigger: CTCTGCCCTCTTGAGCCAGCACAGGAAGGTGAGGCC...CTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
3UTR-3UTR GCA 90 bp AAGACCACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCCAACCGCCAGCCCCTaGATGCCTAGCAGGGAGGTA +
Preference number: 2 (lower is better)
Translates to: KTTTQYLCTLQPTPPPGLPTASP*MPSREV
Trigger: TACCTCCCTGCTAGGCATGCAGGGGCTGGCGGTTGG...AAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTGGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
3UTR-3UTR CCA 90 bp GTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACAGGTTCACTCAGGTGTGGGTCATGTGTaGGGTGGGGGCTGCTTCTGG +
Preference number: 2 (lower is better)
Translates to: VFVYPAANTTSWASQVHSGVGHV*GGGCFW
Trigger: CCAGAAGCAGCCCCCACCCCACACATGACCCACACC...TGAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
3UTR-3UTR CCA 90 bp TGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACAGGTTCACTCACCCAAGGGACCTCCAATGGATaGGAGAAAGGGCTCTCAGCC +
Preference number: 2 (lower is better)
Translates to: CVPCSQHHLLGFTGSLTQGTSNG*EKGLSA
Trigger: GGCTGAGAGCCCTTTCTCCCATCCATTGGAGGTCCC...TTGGGTGAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
3UTR-3UTR CCA 90 bp CCCCCATGCCCAGGGCACAGCTTTGTTGCTAAGCCTGTAACAAAAGACCACCACCTCAGGGGTACCTTCTaGGAAGGACAAGCCAGGGCT +
Preference number: 2 (lower is better)
Translates to: PPCPGHSFVAKPVTKDHHLRGTF*EGQARA
Trigger: AGCCCTGGCTTGTCCTTCCCAGAAGGTACCCCTGAG...GTGGTGGTCTTTTGTTACAGGCTTAGCAACAAAGCTGTGCCCTGGGCATGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
3UTR-3UTR CCA 90 bp TCACAGGTTCACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGTACTCATCCTGGGACCTCCAATaGATGGGAGAAAGGGCTCTC +
Preference number: 2 (lower is better)
Translates to: SQVHSPKRPAQPRPSGYSSWDLQ*MGERAL
Trigger: GAGAGCCCTTTCTCCCATCCATTGGAGGTCCCAGGA...TGAGTACCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTGAACCTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
3UTR-3UTR CCA 90 bp ACCACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACCGCATAGCCTCTCCATaGGTGACACTCCTGGGACCT +
Preference number: 2 (lower is better)
Translates to: TTTQYLCTLQPTPPPGLHRIASP*VTLLGP
Trigger: AGGTCCCAGGAGTGTCACCCATGGAGAGGCTATGCG...GTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
3UTR-3UTR CCA 90 bp CAGGTTCACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGTACTCAGTGATCATTGGACCTCAGTaGTTCTCACCGCCCCAACCA +
Preference number: 2 (lower is better)
Translates to: QVHSPKRPAQPRPSGYSVIIGPQ*FSPPQP
Trigger: TGGTTGGGGCGGTGAGAACCACTGAGGTCCAATGAT...CACTGAGTACCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTGAACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
3UTR-3UTR CCA 90 bp CTGCAGCCAACACCACCTCCTGGGCTTCACAGGTTCACTCACCCAAGAGGCCAGCTGAAGGGTAGACTGTaGGGCAAAGAGGACAAACTC +
Preference number: 2 (lower is better)
Translates to: LQPTPPPGLHRFTHPRGQLKGRL*GKEDKL
Trigger: GAGTTTGTCCTCTTTGCCCCACAGTCTACCCTTCAG...CTGGCCTCTTGGGTGAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
3UTR-3UTR TCA 90 bp CTTTATTTGAACTCCCTCCCCTACAGATCATTCAGATGCCCGGGACCATGTCCACAGCCCAGCTTCACGTaGGGGCGGTGTGGGTCATGT +
Preference number: 2 (lower is better)
Translates to: LYLNSLPYRSFRCPGPCPQPSFT*GRCGSC
Trigger: ACATGACCCACACCGCCCTCACGTGAAGCTGGGCTG...TGGACATGGTCCCGGGCATCTGAATGATCTGTAGGGGAGGGAGTTCAAATAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
3UTR-3UTR CCA 90 bp CCAGGTTCCTCTCAGCAACATGGAAAGCTAAGCCATTTCACAAACGCACAACTGGGACAAGCCAGGGCTTaGGTGCCCGCCCATCCCAAG +
Preference number: 2 (lower is better)
Translates to: PGSSQQHGKLSHFTNAQLGQARA*VPAHPK
Trigger: CTTGGGATGGGCGGGCACCCAAGCCCTGGCTTGTCC...CAGTTGTGCGTTTGTGAAATGGCTTAGCTTTCCATGTTGCTGAGAGGAACCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
3UTR-3UTR CCA 90 bp ACTGGATCCAGACCTCCAAGTCTCATCATTGGACCTCAGTGGTTCTCACCGCCCCTCACCTTCCTGTGCTaGCTCAAGAGGGCAGAGGAA +
Preference number: 2 (lower is better)
Translates to: TGSRPPSLIIGPQWFSPPLTFLC*LKRAEE
Trigger: TTCCTCTGCCCTCTTGAGCCAGCACAGGAAGGTGAG...GGGCGGTGAGAACCACTGAGGTCCAATGATGAGACTTGGAGGTCTGGATCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
3UTR-3UTR CCA 90 bp CAGGTTCACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGTACTCAGTGAAGATGCCGGAGGCTTaGAAGTTCTCAAGGGAACTG +
Preference number: 2 (lower is better)
Translates to: QVHSPKRPAQPRPSGYSVKMPEA*KFSREL
Trigger: CAGTTCCCTTGAGAACTTCCAAGCCTCCGGCATCTT...CACTGAGTACCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTGAACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
3UTR-3UTR CCA 90 bp CCAGGGCCATTTCAGTGTCATGGACCTGAAGCTGTCCTTAGCTTCCACAGGCTGCTGATGGAGAGAAACTaGCCCTTCGGGGAGTGCCAT +
Preference number: 2 (lower is better)
Translates to: PGPFQCHGPEAVLSFHRLLMERN*PFGECH
Trigger: ATGGCACTCCCCGAAGGGCCAGTTTCTCTCCATCAG...CAGCCTGTGGAAGCTAAGGACAGCTTCAGGTCCATGACACTGAAATGGCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376726.3
3UTR-3UTR GCA 90 bp CAAAAGACCACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGAGGTCAGGCAGCGTTTaGCAGGATTTGGCTCTGACC +
Preference number: 2 (lower is better)
Translates to: QKTTTQYLCTLQPTPPPGRSGSV*QDLALT
Trigger: GGTCAGAGCCAAATCCTGGCAAACGCTGCCTGACCT...CCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTGGTCTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
3UTR-3UTR CCA 90 bp TTGGAGTATGTTGCCTCTCCTATCAAGAGGCATCTGGGGGCACAAAAATCTTTCGGACAAGCCAGGGCTTaGGTGCCCGCCCATCCCAAG +
Preference number: 2 (lower is better)
Translates to: LEYVASPIKRHLGAQKSFGQARA*VPAHPK
Trigger: CTTGGGATGGGCGGGCACCCAAGCCCTGGCTTGTCC...GAAAGATTTTTGTGCCCCCAGATGCCTCTTGATAGGAGAGGCAACATACTCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
3UTR-3UTR CCA 90 bp GTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACAGGTTCACTCACCCAAGAAGAGGGCAGAGGAATaGAGATGGCAATGCCTTTTC +
Preference number: 2 (lower is better)
Translates to: VYPAANTTSWASQVHSPKKRAEE*RWQCLF
Trigger: GAAAAGGCATTGCCATCTCCATTCCTCTGCCCTCTT...CTTGGGTGAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
3UTR CAA 90 bp AGTGGTTCTCACCGCCCCAACCACAGAGTGAAGGTCAGGCAGCGTTaGCCAGGATTTGGCTCTGACCAAGTTAGTGCTCTAACAAGTCAC +
Preference number: 2 (lower is better)
Translates to: SGSHRPNHRVKVRQR*PGFGSDQVSALTSH
Trigger: GTGACTTGTTAGAGCACTAACTTGGTCAGAGCCAAATCCTGGCAAACGCTGCCTGACCTTCACTCTGTGGTTGGGGCGGTGAGAACCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
3UTR-3UTR GCA 90 bp CTGCAGCCAACACCACCTCCTGGGCTTCACAGGTTCACTCACCCAAGAGGCCAGCTATTTGGAGTATGTTaGCTCTCCTATCAAGAGGCA +
Preference number: 2 (lower is better)
Translates to: LQPTPPPGLHRFTHPRGQLFGVC*LSYQEA
Trigger: TGCCTCTTGATAGGAGAGGCAACATACTCCAAATAG...CTGGCCTCTTGGGTGAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
3UTR-3UTR TCA 90 bp TCAAGAGGCATCTGGGGGCACAAAAATCTTTCTGGATCACAGCTTGAAGAAACACAGCCCAGCTTCACGTaGGGGCGGTGTGGGTCATGT +
Preference number: 2 (lower is better)
Translates to: SRGIWGHKNLSGSQLEETQPSFT*GRCGSC
Trigger: ACATGACCCACACCGCCCTCACGTGAAGCTGGGCTG...TGTTTCTTCAAGCTGTGATCCAGAAAGATTTTTGTGCCCCCAGATGCCTCTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
3UTR-3UTR GCA 90 bp ATAAAGCTTTATTTGAACTCCCTCCCCTACAGATCATTCAGATGCCCGGGACCAGTGTGGGGTGGGGGCTaGTTCTGGGACGTAGGAAGA +
Preference number: 2 (lower is better)
Translates to: IKLYLNSLPYRSFRCPGPVWGGG*FWDVGR
Trigger: TCTTCCTACGTCCCAGAAGCAGCCCCCACCCCACAC...TGGTCCCGGGCATCTGAATGATCTGTAGGGGAGGGAGTTCAAATAAAGCTTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
3UTR-3UTR CCA 90 bp CTCCTATCAAGAGGCATCTGGGGGCACAAAAATCTTTCTGGATCACAGCTTGAAGGTGGGGGCTGCTTCTaGGACGTAGGAAGACGCCAA +
Preference number: 2 (lower is better)
Translates to: LLSRGIWGHKNLSGSQLEGGGCF*DVGRRQ
Trigger: TTGGCGTCTTCCTACGTCCCAGAAGCAGCCCCCACC...TTCAAGCTGTGATCCAGAAAGATTTTTGTGCCCCCAGATGCCTCTTGATAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
3UTR-3UTR CCA 90 bp ACCATGTCCAGGTTCCTCTCAGCAACATGGAAAGCTAAGCCATTTCACAAACGCACAACCACGACCGAGTaGGTACTCAGTGGCCCAGAC +
Preference number: 2 (lower is better)
Translates to: TMSRFLSATWKAKPFHKRTTTTE*VLSGPD
Trigger: GTCTGGGCCACTGAGTACCCACTCGGTCGTGGTTGT...GCGTTTGTGAAATGGCTTAGCTTTCCATGTTGCTGAGAGGAACCTGGACATGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
3UTR-3UTR CCA 90 bp CCCCCATGCCCAGGGCACAGCTTTGTTGCTAAGCCTGTAACAAAAGACCACCACGCAGAGGAATGGAGATaGCAATGCCTTTTCATTCCA +
Preference number: 2 (lower is better)
Translates to: PPCPGHSFVAKPVTKDHHAEEWR*QCLFIP
Trigger: TGGAATGAAAAGGCATTGCCATCTCCATTCCTCTGC...GTGGTGGTCTTTTGTTACAGGCTTAGCAACAAAGCTGTGCCCTGGGCATGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
3UTR-3UTR CCA 90 bp TGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACAGGTTCACTCACCCAAAAAACAAAGAGAGACTaGATCCAGACCTCCAAGTCT +
Preference number: 2 (lower is better)
Translates to: CVPCSQHHLLGFTGSLTQKTKRD*IQTSKS
Trigger: AGACTTGGAGGTCTGGATCCAGTCTCTCTTTGTTTT...TTGGGTGAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
3UTR-3UTR CCA 90 bp CTCCTATCAAGAGGCATCTGGGGGCACAAAAATCTTTCTGGATCACAGCTTGAACTCACCTTCCTGTGCTaGCTCAAGAGGGCAGAGGAA +
Preference number: 2 (lower is better)
Translates to: LLSRGIWGHKNLSGSQLELTFLC*LKRAEE
Trigger: TTCCTCTGCCCTCTTGAGCCAGCACAGGAAGGTGAG...TTCAAGCTGTGATCCAGAAAGATTTTTGTGCCCCCAGATGCCTCTTGATAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
3UTR-3UTR GCA 90 bp AAGACCACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTGAATGGAGATGGCAATaGCTTTTCATTCCAGGAAAC +
Preference number: 2 (lower is better)
Translates to: KTTTQYLCTLQPTPPPGLEWRWQ*LFIPGN
Trigger: GTTTCCTGGAATGAAAAGGCATTGCCATCTCCATTC...AAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTGGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
3UTR-3UTR GCA 90 bp CAAAAGACCACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTATTTGGAGTATGTTaGCTCTCCTATCAAGAGGCA +
Preference number: 2 (lower is better)
Translates to: QKTTTQYLCTLQPTPPPGLFGVC*LSYQEA
Trigger: TGCCTCTTGATAGGAGAGGCAACATACTCCAAATAG...CCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTGGTCTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
3UTR-3UTR CCA 90 bp ACTGGATCCAGACCTCCAAGTCTCATCATTGGACCTCAGTGGTTCTCACCGCCCGAAACAGAACATAACTaGAGTAGCTTCAGAACTAAG +
Preference number: 2 (lower is better)
Translates to: TGSRPPSLIIGPQWFSPPETEHN*SSFRTK
Trigger: CTTAGTTCTGAAGCTACTCCAGTTATGTTCTGTTTC...GGGCGGTGAGAACCACTGAGGTCCAATGATGAGACTTGGAGGTCTGGATCCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
3UTR-3UTR TCA 90 bp ACCATGTCCAGGTTCCTCTCAGCAACATGGAAAGCTAAGCCATTTCACAAACGCTCCACACACTACATGTaGGTGTTGCATGCTGTTCTT +
Preference number: 2 (lower is better)
Translates to: TMSRFLSATWKAKPFHKRSTHYM*VLHAVL
Trigger: AAGAACAGCATGCAACACTCACATGTAGTGTGTGGA...GCGTTTGTGAAATGGCTTAGCTTTCCATGTTGCTGAGAGGAACCTGGACATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
3UTR-3UTR CCA 90 bp ATGTCCAGGTTCCTCTCAGCAACATGGAAAGCTAAGCCATTTCACAAACGCACAAAGAGGGCAGAGGAATaGAGATGGCAATGCCTTTTC +
Preference number: 2 (lower is better)
Translates to: MSRFLSATWKAKPFHKRTKRAEE*RWQCLF
Trigger: GAAAAGGCATTGCCATCTCCATTCCTCTGCCCTCTT...TGTGCGTTTGTGAAATGGCTTAGCTTTCCATGTTGCTGAGAGGAACCTGGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
3UTR-3UTR GCA 90 bp CCAGGTTCCTCTCAGCAACATGGAAAGCTAAGCCATTTCACAAACGCACAACTGGAATGGAGATGGCAATaGCTTTTCATTCCAGGAAAC +
Preference number: 2 (lower is better)
Translates to: PGSSQQHGKLSHFTNAQLEWRWQ*LFIPGN
Trigger: GTTTCCTGGAATGAAAAGGCATTGCCATCTCCATTC...CAGTTGTGCGTTTGTGAAATGGCTTAGCTTTCCATGTTGCTGAGAGGAACCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
3UTR CAA 90 bp GAGTTTCTAATAGCTTCCCTGAAGAACCCAACTATTTGGAGTATGTaGCCTCTCCTATCAAGAGGCATCTGGGGGCACAAAAATCTTTCT +
Preference number: 2 (lower is better)
Translates to: EFLIASLKNPTIWSM*PLLSRGIWGHKNLS
Trigger: AGAAAGATTTTTGTGCCCCCAGATGCCTCTTGATAGGAGAGGCAACATACTCCAAATAGTTGGGTTCTTCAGGGAAGCTATTAGAAACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
3UTR GCA 72 bp GGGGTACCTTCTGGGAAGGACAAGCCAGGGCTTGGGTaGCCGCCCATCCCAAGAGCCCCACAAGGTGCCAGC +
Preference number: 3 (lower is better)
Translates to: GVPSGKDKPGLG*PPIPRAPQGAS
Trigger: GCTGGCACCTTGTGGGGCTCTTGGGATGGGCGGGCACCCAAGCCCTGGCTTGTCCTTCCCAGAAGGTACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
3UTR GCA 72 bp GCTCACAGACCGAACCGCTACTTAGCACACACTCAGTaGTCCCACGGGCAGCGTCCAGCCGAGGGGGCGTGG +
Preference number: 3 (lower is better)
Translates to: AHRPNRYLAHTQ*SHGQRPAEGAW
Trigger: CCACGCCCCCTCGGCTGGACGCTGCCCGTGGGAGCACTGAGTGTGTGCTAAGTAGCGGTTCGGTCTGTGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376726.3
3UTR CCA 72 bp CTCAGGGGTACCTTCTGGGAAGGACAAGCCAGGGCTTaGGTGCCCGCCCATCCCAAGAGCCCCACAAGGTGC +
Preference number: 3 (lower is better)
Translates to: LRGTFWEGQARA*VPAHPKSPTRC
Trigger: GCACCTTGTGGGGCTCTTGGGATGGGCGGGCACCCAAGCCCTGGCTTGTCCTTCCCAGAAGGTACCCCTGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
3UTR CCA 72 bp AGCCCAGCTTCACGTGAGGGCGGTGTGGGTCATGTGTaGGGTGGGGGCTGCTTCTGGGACGTAGGAAGACGC +
Preference number: 3 (lower is better)
Translates to: SPASREGGVGHV*GGGCFWDVGRR
Trigger: GCGTCTTCCTACGTCCCAGAAGCAGCCCCCACCCCACACATGACCCACACCGCCCTCACGTGAAGCTGGGCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
3UTR CCA 72 bp AAAGGGCTCTCAGCCCAGCTTCACGTGAGGGCGGTGTaGGTCATGTGTGGGGTGGGGGCTGCTTCTGGGACG +
Preference number: 3 (lower is better)
Translates to: KGLSAQLHVRAV*VMCGVGAASGT
Trigger: CGTCCCAGAAGCAGCCCCCACCCCACACATGACCCACACCGCCCTCACGTGAAGCTGGGCTGAGAGCCCTTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
3UTR CCA 72 bp GGCTTTGTTCGCAGGCAGATGGAGCTGGGCCCACCGTaGCGAGGGGCAGCTGCAGCAGCTTGGGTCTTCAGA +
Preference number: 3 (lower is better)
Translates to: GFVRRQMELGPP*RGAAAAAWVFR
Trigger: TCTGAAGACCCAAGCTGCTGCAGCTGCCCCTCGCCACGGTGGGCCCAGCTCCATCTGCCTGCGAACAAAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376726.3
3UTR CCA 72 bp TTCTCAGAAGGGGCTTTGTTCGCAGGCAGATGGAGCTaGGCCCACCGTGGCGAGGGGCAGCTGCAGCAGCTT +
Preference number: 3 (lower is better)
Translates to: FSEGALFAGRWS*AHRGEGQLQQL
Trigger: AAGCTGCTGCAGCTGCCCCTCGCCACGGTGGGCCCAGCTCCATCTGCCTGCGAACAAAGCCCCTTCTGAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376726.3
3UTR CCA 72 bp AGTTCCTTCTCAGAAGGGGCTTTGTTCGCAGGCAGATaGAGCTGGGCCCACCGTGGCGAGGGGCAGCTGCAG +
Preference number: 3 (lower is better)
Translates to: SSFSEGALFAGR*SWAHRGEGQLQ
Trigger: CTGCAGCTGCCCCTCGCCACGGTGGGCCCAGCTCCATCTGCCTGCGAACAAAGCCCCTTCTGAGAAGGAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376726.3
3UTR CCA 72 bp GGTCCAGGCACACCTGAGAGACTGATGGAGAGAAACTaGCCCTTCGGGGAGTGCCATGGCTGGGCCCTCCCT +
Preference number: 3 (lower is better)
Translates to: GPGTPERLMERN*PFGECHGWALP
Trigger: AGGGAGGGCCCAGCCATGGCACTCCCCGAAGGGCCAGTTTCTCTCCATCAGTCTCTCAGGTGTGCCTGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376726.3
3UTR CCA 72 bp GCAGGCGCGCTATCCCAGGGCCTCACCTTCCTGTGCTaGCTCAAGAGGGCAGAGGAATGGAGATGGCAATGC +
Preference number: 3 (lower is better)
Translates to: AGALSQGLTFLC*LKRAEEWRWQC
Trigger: GCATTGCCATCTCCATTCCTCTGCCCTCTTGAGCCAGCACAGGAAGGTGAGGCCCTGGGATAGCGCGCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
3UTR CCA 72 bp CTCTCCATGGGTGACACTCCTGGGACCTCCAATGGATaGGAGAAAGGGCTCTCAGCCCAGCTTCACGTGAGG +
Preference number: 3 (lower is better)
Translates to: LSMGDTPGTSNG*EKGLSAQLHVR
Trigger: CCTCACGTGAAGCTGGGCTGAGAGCCCTTTCTCCCATCCATTGGAGGTCCCAGGAGTGTCACCCATGGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
3UTR-3UTR CAA 90 bp CAAAAGACCACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGAGGACAAGCCAGGGCTaGGGTGCCCGCCCATCCCAA +
Preference number: 3 (lower is better)
Translates to: QKTTTQYLCTLQPTPPPGRTSQG*GARPSQ
Trigger: TTGGGATGGGCGGGCACCCAAGCCCTGGCTTGTCCT...CCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTGGTCTTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
3UTR TCA 72 bp TGGACCTCAGTGGTTCTCACCGCCCCAACCACAGAGTaGAGGTCAGGCAGCGTTTGCCAGGATTTGGCTCTG +
Preference number: 3 (lower is better)
Translates to: WTSVVLTAPTTE*RSGSVCQDLAL
Trigger: CAGAGCCAAATCCTGGCAAACGCTGCCTGACCTTCACTCTGTGGTTGGGGCGGTGAGAACCACTGAGGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
3UTR-3UTR CAA 90 bp CCAGGTTCCTCTCAGCAACATGGAAAGCTAAGCCATTTCACAAACGCACAACTGAGGACAAGCCAGGGCTaGGGTGCCCGCCCATCCCAA +
Preference number: 3 (lower is better)
Translates to: PGSSQQHGKLSHFTNAQLRTSQG*GARPSQ
Trigger: TTGGGATGGGCGGGCACCCAAGCCCTGGCTTGTCCT...CAGTTGTGCGTTTGTGAAATGGCTTAGCTTTCCATGTTGCTGAGAGGAACCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
3UTR CCA 72 bp GGATCCAGACCTCCAAGTCTCATCATTGGACCTCAGTaGTTCTCACCGCCCCAACCACAGAGTGAAGGTCAG +
Preference number: 3 (lower is better)
Translates to: GSRPPSLIIGPQ*FSPPQPQSEGQ
Trigger: CTGACCTTCACTCTGTGGTTGGGGCGGTGAGAACCACTGAGGTCCAATGATGAGACTTGGAGGTCTGGATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
3UTR CCA 72 bp TCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTaGGCTTCACAGGTTCACTCACCCAAGAGGCCAGCA +
Preference number: 3 (lower is better)
Translates to: SVFVYPAANTTS*ASQVHSPKRPA
Trigger: TGCTGGCCTCTTGGGTGAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
3UTR-3UTR CAA 90 bp ACTGGATCCAGACCTCCAAGTCTCATCATTGGACCTCAGTGGTTCTCACCGCCCAAAGATGCCGGAGGCTaGGAAGTTCTCAAGGGAACT +
Preference number: 3 (lower is better)
Translates to: TGSRPPSLIIGPQWFSPPKDAGG*EVLKGT
Trigger: AGTTCCCTTGAGAACTTCCAAGCCTCCGGCATCTTT...GGGCGGTGAGAACCACTGAGGTCCAATGATGAGACTTGGAGGTCTGGATCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
3UTR CCA 72 bp AGCCCCTGCATGCCTAGCAGGGAGGTAAGCACCCACTaGCGTCGTGATTTCCATTATCTTGCTAATGTTGAC +
Preference number: 3 (lower is better)
Translates to: SPCMPSREVSTH*RRDFHYLANVD
Trigger: GTCAACATTAGCAAGATAATGGAAATCACGACGCCAGTGGGTGCTTACCTCCCTGCTAGGCATGCAGGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
3UTR GCA 72 bp CTTTATTTGAACTCCCTCCCCTACAGATCATTCAGATaGCCGGGACCATGTCCAGGTTCCTCTCAGCAACAT +
Preference number: 3 (lower is better)
Translates to: LYLNSLPYRSFR*PGPCPGSSQQH
Trigger: ATGTTGCTGAGAGGAACCTGGACATGGTCCCGGGCATCTGAATGATCTGTAGGGGAGGGAGTTCAAATAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
3UTR CCA 72 bp TTCCTGTGCTGGCTCAAGAGGGCAGAGGAATGGAGATaGCAATGCCTTTTCATTCCAGGAAACCAAACTCAG +
Preference number: 3 (lower is better)
Translates to: FLCWLKRAEEWR*QCLFIPGNQTQ
Trigger: CTGAGTTTGGTTTCCTGGAATGAAAAGGCATTGCCATCTCCATTCCTCTGCCCTCTTGAGCCAGCACAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
3UTR-3UTR CAA 90 bp TCAAGAGGCATCTGGGGGCACAAAAATCTTTCTGGATCACAGCTTGAAGAAACAAAAGATGCCGGAGGCTaGGAAGTTCTCAAGGGAACT +
Preference number: 3 (lower is better)
Translates to: SRGIWGHKNLSGSQLEETKDAGG*EVLKGT
Trigger: AGTTCCCTTGAGAACTTCCAAGCCTCCGGCATCTTT...TGTTTCTTCAAGCTGTGATCCAGAAAGATTTTTGTGCCCCCAGATGCCTCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
3UTR-3UTR CAA 90 bp AAGACCACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTATTATCTTGCTAATGTaGACAGCACCTAAGTCACAT +
Preference number: 3 (lower is better)
Translates to: KTTTQYLCTLQPTPPPGLIILLM*TAPKSH
Trigger: ATGTGACTTAGGTGCTGTCAACATTAGCAAGATAAT...AAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTGGTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
3UTR TCA 72 bp AAGCTGTCCTTAGCTTCCACAGGCTGGCTGTGGTCCTaGGAATTCTCACATGGTTTATGTTTAACCACACGT +
Preference number: 3 (lower is better)
Translates to: KLSLASTGWLWS*EFSHGLCLTTR
Trigger: ACGTGTGGTTAAACATAAACCATGTGAGAATTCTCAGGACCACAGCCAGCCTGTGGAAGCTAAGGACAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376726.3
3UTR CCA 72 bp ATTTGGAGTATGTTGCCTCTCCTATCAAGAGGCATCTaGGGGCACAAAAATCTTTCTGGATCACAGCTTGAA +
Preference number: 3 (lower is better)
Translates to: IWSMLPLLSRGI*GHKNLSGSQLE
Trigger: TTCAAGCTGTGATCCAGAAAGATTTTTGTGCCCCCAGATGCCTCTTGATAGGAGAGGCAACATACTCCAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
3UTR TCA 72 bp AAAAGAACATGTTCAAGTAAATCCACACACTACATGTaGGTGTTGCATGCTGTTCTTCCACAATATAAAAGT +
Preference number: 3 (lower is better)
Translates to: KRTCSSKSTHYM*VLHAVLPQYKS
Trigger: ACTTTTATATTGTGGAAGAACAGCATGCAACACTCACATGTAGTGTGTGGATTTACTTGAACATGTTCTTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR TCA 90 bp TGTTCGCAGGCAGATGGAGCTGGGCCCACCGTGGCGAGGGGCAGCTGCAGCAGCGGCGCTGCGCTCCGGTaGGTCTGCGGTCCCACCCGG +
Preference number: 4 (lower is better)
Translates to: CSQADGAGPTVARGSCSSGAALR*VCGPTR
Trigger: CCGGGTGGGACCGCAGACTCACCGGAGCGCAGCGCC...GCTGCTGCAGCTGCCCCTCGCCACGGTGGGCCCAGCTCCATCTGCCTGCGAACA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR CCA 90 bp GCAGCGTCCAGCCGAGGGGGCGTGGCACACAACCTGCCTGCCCCAGGGTCCAGGGGGGAGTGCCATGGCTaGGCCCTCCCTGCCGGACCT +
Preference number: 4 (lower is better)
Translates to: AASSRGGVAHNLPAPGSRGECHG*ALPAGP
Trigger: AGGTCCGGCAGGGAGGGCCCAGCCATGGCACTCCCC...CCTGGACCCTGGGGCAGGCAGGTTGTGTGCCACGCCCCCTCGGCTGGACGCTGC
73% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR CCA 90 bp GGGCAGCGTCCAGCCGAGGGGGCGTGGCACACAACCTGCCTGCCCCAGGGTCCACCAGCCGAGGGGGCGTaGCACACAACCTGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: GQRPAEGAWHTTCLPQGPPAEGA*HTTCLP
Trigger: GGGCAGGCAGGTTGTGTGCCACGCCCCCTCGGCTGG...TGGACCCTGGGGCAGGCAGGTTGTGTGCCACGCCCCCTCGGCTGGACGCTGCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR GCA 90 bp GCACACACTCAGTGCTCCCACGGGCAGCGTCCAGCCGAGGGGGCGTGGCACACAAGAGCCCTCGCAGGCTaGCCAGCAGCCTCCCGACGC +
Preference number: 4 (lower is better)
Translates to: AHTQCSHGQRPAEGAWHTRALAG*PAASRR
Trigger: GCGTCGGGAGGCTGCTGGGCAGCCTGCGAGGGCTCT...TGTGTGCCACGCCCCCTCGGCTGGACGCTGCCCGTGGGAGCACTGAGTGTGTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR CCA 90 bp GGGCAGCGTCCAGCCGAGGGGGCGTGGCACACAACCTGCCTGCCCCAGGGTCCAGCACGCGAAAGGGGCTaGCGCCTTTCTAGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: GQRPAEGAWHTTCLPQGPARERG*RLSRLP
Trigger: CGGGAGCCTAGAAAGGCGCCAGCCCCTTTCGCGTGC...TGGACCCTGGGGCAGGCAGGTTGTGTGCCACGCCCCCTCGGCTGGACGCTGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR TCA 90 bp CGTCCAGCCGAGGGGGCGTGGCACACAACCTGCCTGCCCCAGGGTCCAGGCACAGAGGCTGCGCAAGCCTaGGTCCGTGTTCTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: RPAEGAWHTTCLPQGPGTEAAQA*VRVLGP
Trigger: GGGACCCAGAACACGGACTCAGGCTTGCGCAGCCTC...TGTGCCTGGACCCTGGGGCAGGCAGGTTGTGTGCCACGCCCCCTCGGCTGGACG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR CCA 90 bp TTGTTCGCAGGCAGATGGAGCTGGGCCCACCGTGGCGAGGGGCAGCTGCAGCAGGGCGAGGGGACCCTCTaGGATGGGGAGGAGCCGGGA +
Preference number: 4 (lower is better)
Translates to: LFAGRWSWAHRGEGQLQQGEGTL*DGEEPG
Trigger: TCCCGGCTCCTCCCCATCCCAGAGGGTCCCCTCGCC...CTGCTGCAGCTGCCCCTCGCCACGGTGGGCCCAGCTCCATCTGCCTGCGAACAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR CCA 90 bp TGGAGCTGGGCCCACCGTGGCGAGGGGCAGCTGCAGCAGCTTGGGTCTTCAGAGGAGCTGGGCCCACCGTaGCGAGGGGCAGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: WSWAHRGEGQLQQLGSSEELGPP*RGAAAA
Trigger: TGCTGCAGCTGCCCCTCGCCACGGTGGGCCCAGCTC...CTCTGAAGACCCAAGCTGCTGCAGCTGCCCCTCGCCACGGTGGGCCCAGCTCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR GCA 90 bp TCGCAGGCAGATGGAGCTGGGCCCACCGTGGCGAGGGGCAGCTGCAGCAGCTTGGCCTGGCTGTGCTGCTaGTGCTGCAACTGCGGGAGC +
Preference number: 4 (lower is better)
Translates to: SQADGAGPTVARGSCSSLAWLCC*CCNCGS
Trigger: GCTCCCGCAGTTGCAGCAGCAGCAGCACAGCCAGGC...CAAGCTGCTGCAGCTGCCCCTCGCCACGGTGGGCCCAGCTCCATCTGCCTGCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR GCA 90 bp TTGTTCGCAGGCAGATGGAGCTGGGCCCACCGTGGCGAGGGGCAGCTGCAGCAGTGGCTGGGCCCTCCCTaGCGGACCTCCAGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: LFAGRWSWAHRGEGQLQQWLGPP*RTSRCP
Trigger: TGGACACCTGGAGGTCCGGCAGGGAGGGCCCAGCCA...CTGCTGCAGCTGCCCCTCGCCACGGTGGGCCCAGCTCCATCTGCCTGCGAACAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR GCA 90 bp TGGAGCTGGGCCCACCGTGGCGAGGGGCAGCTGCAGCAGCTTGGGTCTTCAGAGTGGCCCTTCGGGGAGTaGCATGGCTGGGCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: WSWAHRGEGQLQQLGSSEWPFGE*HGWALP
Trigger: AGGGAGGGCCCAGCCATGGCACTCCCCGAAGGGCCA...CTCTGAAGACCCAAGCTGCTGCAGCTGCCCCTCGCCACGGTGGGCCCAGCTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR CCA 90 bp TGGAGCTGGGCCCACCGTGGCGAGGGGCAGCTGCAGCAGCTTGGGTCTTCAGAGTCTGTGCTCCCAGAGTaGGTGCCTCACGCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: WSWAHRGEGQLQQLGSSESVLPE*VPHARG
Trigger: GCCCCGGGCGTGAGGCACCCACTCTGGGAGCACAGA...CTCTGAAGACCCAAGCTGCTGCAGCTGCCCCTCGCCACGGTGGGCCCAGCTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR CCA 90 bp GCACACACTCAGTGCTCCCACGGGCAGCGTCCAGCCGAGGGGGCGTGGCACACACGCTCAGTTGTCCAGTaGGGCCCGAGGATCCAGGGC +
Preference number: 4 (lower is better)
Translates to: AHTQCSHGQRPAEGAWHTRSVVQ*GPRIQG
Trigger: GCCCTGGATCCTCGGGCCCCACTGGACAACTGAGCG...TGTGTGCCACGCCCCCTCGGCTGGACGCTGCCCGTGGGAGCACTGAGTGTGTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR TCA 90 bp ATGGAGAGAAACTGGCCCTTCGGGGAGTGCCATGGCTGGGCCCTCCCTGCCGGACTGGGATTACCGGCATaGGCCACTGCGACCGGCCCC +
Preference number: 4 (lower is better)
Translates to: MERNWPFGECHGWALPAGLGLPA*ATATGP
Trigger: GGGGCCGGTCGCAGTGGCTCATGCCGGTAATCCCAG...TCCGGCAGGGAGGGCCCAGCCATGGCACTCCCCGAAGGGCCAGTTTCTCTCCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR GCA 90 bp GCAGCGTCCAGCCGAGGGGGCGTGGCACACAACCTGCCTGCCCCAGGGTCCAGGATACGAGCCTGGCTGTaGTGCTGCTGCTGCAACTGC +
Preference number: 4 (lower is better)
Translates to: AASSRGGVAHNLPAPGSRIRAWL*CCCCNC
Trigger: GCAGTTGCAGCAGCAGCAGCACAGCCAGGCTCGTAT...CCTGGACCCTGGGGCAGGCAGGTTGTGTGCCACGCCCCCTCGGCTGGACGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR GCA 90 bp TGGAGCTGGGCCCACCGTGGCGAGGGGCAGCTGCAGCAGCTTGGGTCTTCAGAGCTCCCGGGCTGCCTGTaGACTCAGCGCGGGATACGA +
Preference number: 4 (lower is better)
Translates to: WSWAHRGEGQLQQLGSSELPGCL*TQRGIR
Trigger: TCGTATCCCGCGCTGAGTGCACAGGCAGCCCGGGAG...CTCTGAAGACCCAAGCTGCTGCAGCTGCCCCTCGCCACGGTGGGCCCAGCTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR GCA 90 bp GCCGCTCAGTTGTCCAGTGGGGCCCGAGGATCCAGGGCAGAAGAATGCTGCTGGGCGGGGGTCACGTCCTaGTGGGGGTCGGTGGTGGGT +
Preference number: 4 (lower is better)
Translates to: AAQLSSGARGSRAEECCWAGVTS*WGSVVG
Trigger: ACCCACCACCGACCCCCAGCAGGACGTGACCCCCGC...CCAGCAGCATTCTTCTGCCCTGGATCCTCGGGCCCCACTGGACAACTGAGCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR GCA 90 bp TGTTCGCAGGCAGATGGAGCTGGGCCCACCGTGGCGAGGGGCAGCTGCAGCAGCACAGCTTCTTCGAGCTaGCAGAGGCACGTGCGGCCC +
Preference number: 4 (lower is better)
Translates to: CSQADGAGPTVARGSCSSTASSS*QRHVRP
Trigger: GGGCCGCACGTGCCTCTGGCAGCTCGAAGAAGCTGT...GCTGCTGCAGCTGCCCCTCGCCACGGTGGGCCCAGCTCCATCTGCCTGCGAACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR GCA 90 bp TCGCAGGCAGATGGAGCTGGGCCCACCGTGGCGAGGGGCAGCTGCAGCAGCTTGGTGGCGAGGGGCAGCTaGAGCAGCTTGGGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: SQADGAGPTVARGSCSSLVARGS*SSLGLQ
Trigger: CTGAAGACCCAAGCTGCTGCAGCTGCCCCTCGCCAC...CAAGCTGCTGCAGCTGCCCCTCGCCACGGTGGGCCCAGCTCCATCTGCCTGCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR CCA 90 bp TGGAGCTGGGCCCACCGTGGCGAGGGGCAGCTGCAGCAGCTTGGGTCTTCAGAGGGGGTCACGTCCTGCTaGGGGTCGGTGGTGGGTGAT +
Preference number: 4 (lower is better)
Translates to: WSWAHRGEGQLQQLGSSEGVTSC*GSVVGD
Trigger: ATCACCCACCACCGACCCCCAGCAGGACGTGACCCC...CTCTGAAGACCCAAGCTGCTGCAGCTGCCCCTCGCCACGGTGGGCCCAGCTCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR TCA 90 bp GCTGGGCCCACCGTGGCGAGGGGCAGCTGCAGCAGCTTGGGTCTTCAGAGCCAAGGGGTCGGTGGTGGGTaGTATGGGGCGATGAGGACT +
Preference number: 4 (lower is better)
Translates to: AGPTVARGSCSSLGLQSQGVGGG*YGAMRT
Trigger: AGTCCTCATCGCCCCATATCACCCACCACCGACCCC...TTGGCTCTGAAGACCCAAGCTGCTGCAGCTGCCCCTCGCCACGGTGGGCCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR GCA 90 bp CACAGACCGAACCGCTACTTAGCACACACTCAGTGCTCCCACGGGCAGCGTCCACCCTGGCCCAGGCGCTaGGCTCCGGTGAGTCTGCGG +
Preference number: 4 (lower is better)
Translates to: HRPNRYLAHTQCSHGQRPPWPRR*APVSLR
Trigger: CCGCAGACTCACCGGAGCGCAGCGCCTGGGCCAGGG...TGGACGCTGCCCGTGGGAGCACTGAGTGTGTGCTAAGTAGCGGTTCGGTCTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR CCA 90 bp GCTGGGCCCACCGTGGCGAGGGGCAGCTGCAGCAGCTTGGGTCTTCAGAGCCAACCTGAGTCCGTGTTCTaGGTCCCATGCTCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: AGPTVARGSCSSLGLQSQPESVF*VPCSSP
Trigger: GGGGCTGGAGCATGGGACCCAGAACACGGACTCAGG...TTGGCTCTGAAGACCCAAGCTGCTGCAGCTGCCCCTCGCCACGGTGGGCCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR CCA 90 bp GCTGGGCCCACCGTGGCGAGGGGCAGCTGCAGCAGCTTGGGTCTTCAGAGCCAATTGTTCGCAGGCAGATaGAGCTGGGCCCACCGTGGC +
Preference number: 4 (lower is better)
Translates to: AGPTVARGSCSSLGLQSQLFAGR*SWAHRG
Trigger: GCCACGGTGGGCCCAGCTCCATCTGCCTGCGAACAA...TTGGCTCTGAAGACCCAAGCTGCTGCAGCTGCCCCTCGCCACGGTGGGCCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR TCA 90 bp TGTTCGCAGGCAGATGGAGCTGGGCCCACCGTGGCGAGGGGCAGCTGCAGCAGCTCTAGGCAGGCTACCTaGGCTCTCTGTGCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: CSQADGAGPTVARGSCSSSRQAT*ALCAPR
Trigger: TCTGGGAGCACAGAGAGCTCAGGTAGCCTGCCTAGA...GCTGCTGCAGCTGCCCCTCGCCACGGTGGGCCCAGCTCCATCTGCCTGCGAACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR GCA 90 bp ACCTTCTGGGAAGGACAAGCCAGGGCTTGGGTGCCCGCCCATCCCAAGAGCCCCAGGTGTCCACCAGCGTaGACCTGCTGTCCCCCACCA +
Preference number: 4 (lower is better)
Translates to: TFWEGQARAWVPAHPKSPRCPPA*TCCPPP
Trigger: TGGTGGGGGACAGCAGGTGCACGCTGGTGGACACCT...GGGGCTCTTGGGATGGGCGGGCACCCAAGCCCTGGCTTGTCCTTCCCAGAAGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR GCA 90 bp TCAGGGGTACCTTCTGGGAAGGACAAGCCAGGGCTTGGGTGCCCGCCCATCCCAAGATGGTCCTGGCCATaGCCGGCCAGGCCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: SGVPSGKDKPGLGCPPIPRWSWP*PARPGR
Trigger: TCTCCCAGGCCTGGCCGGGCATGGCCAGGACCATCT...TGGGATGGGCGGGCACCCAAGCCCTGGCTTGTCCTTCCCAGAAGGTACCCCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR GCA 90 bp TGTTCGCAGGCAGATGGAGCTGGGCCCACCGTGGCGAGGGGCAGCTGCAGCAGCTTAGCACACACTCAGTaGTCCCACGGGCAGCGTCCA +
Preference number: 4 (lower is better)
Translates to: CSQADGAGPTVARGSCSSLAHTQ*SHGQRP
Trigger: TGGACGCTGCCCGTGGGAGCACTGAGTGTGTGCTAA...GCTGCTGCAGCTGCCCCTCGCCACGGTGGGCCCAGCTCCATCTGCCTGCGAACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR CCA 90 bp TCAGGGGTACCTTCTGGGAAGGACAAGCCAGGGCTTGGGTGCCCGCCCATCCCAGGACAAGCCAGGGCTTaGGTGCCCGCCCATCCCAAG +
Preference number: 4 (lower is better)
Translates to: SGVPSGKDKPGLGCPPIPGQARA*VPAHPK
Trigger: CTTGGGATGGGCGGGCACCCAAGCCCTGGCTTGTCC...TGGGATGGGCGGGCACCCAAGCCCTGGCTTGTCCTTCCCAGAAGGTACCCCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CCA 90 bp CACAGACCGAACCGCTACTTAGCACACACTCAGTGCTCCCACGGGCAGCGTCCATGCCGGCCTCCGTCCTaGCGGGGGTCACGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: HRPNRYLAHTQCSHGQRPCRPPS*RGSRPA
Trigger: AGCAGGACGTGACCCCCGCCAGGACGGAGGCCGGCA...TGGACGCTGCCCGTGGGAGCACTGAGTGTGTGCTAAGTAGCGGTTCGGTCTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR CCA 90 bp CACAGACCGAACCGCTACTTAGCACACACTCAGTGCTCCCACGGGCAGCGTCCAGGGGACCCTCTGGGATaGGGAGGAGCCGGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: HRPNRYLAHTQCSHGQRPGDPLG*GGAGRE
Trigger: CTCCCTCCCGGCTCCTCCCCATCCCAGAGGGTCCCC...TGGACGCTGCCCGTGGGAGCACTGAGTGTGTGCTAAGTAGCGGTTCGGTCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376726.3
3UTR CAA 72 bp CCTCAGGGGTACCTTCTGGGAAGGACAAGCCAGGGCTaGGGTGCCCGCCCATCCCAAGAGCCCCACAAGGTG +
Preference number: 4 (lower is better)
Translates to: PQGYLLGRTSQG*GARPSQEPHKV
Trigger: CACCTTGTGGGGCTCTTGGGATGGGCGGGCACCCAAGCCCTGGCTTGTCCTTCCCAGAAGGTACCCCTGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR TCA 90 bp TACTTAGCACACACTCAGTGCTCCCACGGGCAGCGTCCAGCCGAGGGGGCGTGGCGATCTTGCCAGTGCTaGAGTCGCAGTCCCAGACGG +
Preference number: 4 (lower is better)
Translates to: YLAHTQCSHGQRPAEGAWRSCQC*SRSPRR
Trigger: CCGTCTGGGACTGCGACTTCAGCACTGGCAAGATCG...CCACGCCCCCTCGGCTGGACGCTGCCCGTGGGAGCACTGAGTGTGTGCTAAGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR GCA 90 bp CAGGTTCACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGTACTCAGTGGGGCCCCGGAGACGTTaGTGCCCTCCACGACGCTGC +
Preference number: 4 (lower is better)
Translates to: QVHSPKRPAQPRPSGYSVGPRRR*CPPRRC
Trigger: GCAGCGTCGTGGAGGGCAGCAACGTCTCCGGGGCCC...CACTGAGTACCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTGAACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp CCTGCAGCCAACACCACCTCCTGGGCTTCACAGGTTCACTCACCCAAGAGGCCAGCCAGGCCTGGGAGATaGACAGGGCCCCGGAGACGT +
Preference number: 4 (lower is better)
Translates to: PAANTTSWASQVHSPKRPARPGR*TGPRRR
Trigger: ACGTCTCCGGGGCCCTGTGCATCTCCCAGGCCTGGC...TGGCCTCTTGGGTGAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp TGGGCTTCACAGGTTCACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGTGGGCCTCCTTCCCCTaGCAACCGCCAGCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: WASQVHSPKRPAQPRPSGWASFP*QPPAPA
Trigger: TGCAGGGGCTGGCGGTTGGCAGGGGAAGGAGGCCCA...CCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTGAACCTGTGAAGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp CAGGGGTACCTTCTGGGAAGGACAAGCCAGGGCTTGGGTGCCCGCCCATCCCAAGCCTCTTCAGCGTGTTaGCCAGGCGGCACGTGGTCT +
Preference number: 4 (lower is better)
Translates to: QGYLLGRTSQGLGARPSQASSAC*PGGTWS
Trigger: AGACCACGTGCCGCCTGGCCAACACGCTGAAGAGGC...TTGGGATGGGCGGGCACCCAAGCCCTGGCTTGTCCTTCCCAGAAGGTACCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CCA 90 bp TGTTCGCAGGCAGATGGAGCTGGGCCCACCGTGGCGAGGGGCAGCTGCAGCAGCAATGCTGCTGGCCTATaGGCCACACGGCATCTGCAA +
Preference number: 4 (lower is better)
Translates to: CSQADGAGPTVARGSCSSNAAGL*ATRHLQ
Trigger: TTGCAGATGCCGTGTGGCCCATAGGCCAGCAGCATT...GCTGCTGCAGCTGCCCCTCGCCACGGTGGGCCCAGCTCCATCTGCCTGCGAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR CCA 90 bp CACAGACCGAACCGCTACTTAGCACACACTCAGTGCTCCCACGGGCAGCGTCCATGTGCAGGGGCCACCTaGGGGGCCGCTCAGTTGTCC +
Preference number: 4 (lower is better)
Translates to: HRPNRYLAHTQCSHGQRPCAGAT*GAAQLS
Trigger: GGACAACTGAGCGGCCCCCCAGGTGGCCCCTGCACA...TGGACGCTGCCCGTGGGAGCACTGAGTGTGTGCTAAGTAGCGGTTCGGTCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR TCA 90 bp TGGAGCTGGGCCCACCGTGGCGAGGGGCAGCTGCAGCAGCTTGGGTCTTCAGAGCCGCATCTCAGAGGCTaGAGCCAAGGTTTTCATGCC +
Preference number: 4 (lower is better)
Translates to: WSWAHRGEGQLQQLGSSEPHLRG*SQGFHA
Trigger: GGCATGAAAACCTTGGCTTCAGCCTCTGAGATGCGG...CTCTGAAGACCCAAGCTGCTGCAGCTGCCCCTCGCCACGGTGGGCCCAGCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR GCA 90 bp TCGCAGGCAGATGGAGCTGGGCCCACCGTGGCGAGGGGCAGCTGCAGCAGCTTGGGGGACTTCCGAACATaGTGGTCCAAGCAGTTGACA +
Preference number: 4 (lower is better)
Translates to: SQADGAGPTVARGSCSSLGDFRT*WSKQLT
Trigger: TGTCAACTGCTTGGACCAGCATGTTCGGAAGTCCCC...CAAGCTGCTGCAGCTGCCCCTCGCCACGGTGGGCCCAGCTCCATCTGCCTGCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR GCA 90 bp CAGGGGTACCTTCTGGGAAGGACAAGCCAGGGCTTGGGTGCCCGCCCATCCCAAGGCCTCACCTTCCTGTaGTGGCTCAAGAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: QGYLLGRTSQGLGARPSQGLTFL*WLKRAE
Trigger: CTCTGCCCTCTTGAGCCAGCACAGGAAGGTGAGGCC...TTGGGATGGGCGGGCACCCAAGCCCTGGCTTGTCCTTCCCAGAAGGTACCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR GCA 90 bp ACCGCCAGCCCCTGCATGCCTAGCAGGGAGGTAAGCACCCACTGGCGTCGTGATGGCCTCACCTTCCTGTaGTGGCTCAAGAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: TASPCMPSREVSTHWRRDGLTFL*WLKRAE
Trigger: CTCTGCCCTCTTGAGCCAGCACAGGAAGGTGAGGCC...ATCACGACGCCAGTGGGTGCTTACCTCCCTGCTAGGCATGCAGGGGCTGGCGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR GCA 90 bp GCTGGGCCCACCGTGGCGAGGGGCAGCTGCAGCAGCTTGGGTCTTCAGAGCCAAGTTTGCACGCTCTCCTaGAAGCCCCGACAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: AGPTVARGSCSSLGLQSQVCTLS*KPRQLL
Trigger: AAGAAGCTGTCGGGGCTTGCAGGAGAGCGTGCAAAC...TTGGCTCTGAAGACCCAAGCTGCTGCAGCTGCCCCTCGCCACGGTGGGCCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR CCA 90 bp TTCTCAGAAGGGGCTTTGTTCGCAGGCAGATGGAGCTGGGCCCACCGTGGCGAGGCTGGGGGTCGGTGGTaGGTGATATGGGGCGATGAG +
Preference number: 4 (lower is better)
Translates to: FSEGALFAGRWSWAHRGEAGGRW*VIWGDE
Trigger: CTCATCGCCCCATATCACCCACCACCGACCCCCAGC...CTCGCCACGGTGGGCCCAGCTCCATCTGCCTGCGAACAAAGCCCCTTCTGAGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR TCA 90 bp CAGGGGTACCTTCTGGGAAGGACAAGCCAGGGCTTGGGTGCCCGCCCATCCCAATGGCCACCATGGACTTaGGCTCCTGCACCACCACAT +
Preference number: 4 (lower is better)
Translates to: QGYLLGRTSQGLGARPSQWPPWT*APAPPH
Trigger: ATGTGGTGGTGCAGGAGCTCAAGTCCATGGTGGCCA...TTGGGATGGGCGGGCACCCAAGCCCTGGCTTGTCCTTCCCAGAAGGTACCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR TCA 90 bp CTGATGGAGAGAAACTGGCCCTTCGGGGAGTGCCATGGCTGGGCCCTCCCTGCCGCACACCTGAGAGACTaGTGGAGAGAAACTGGCCCT +
Preference number: 4 (lower is better)
Translates to: LMERNWPFGECHGWALPAAHLRD*WRETGP
Trigger: AGGGCCAGTTTCTCTCCATCAGTCTCTCAGGTGTGC...GGCAGGGAGGGCCCAGCCATGGCACTCCCCGAAGGGCCAGTTTCTCTCCATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR TCA 90 bp TCAGGGGTACCTTCTGGGAAGGACAAGCCAGGGCTTGGGTGCCCGCCCATCCCAGGCGCCTCATCCCTCTaGATCTGGACCTGGCAATTG +
Preference number: 4 (lower is better)
Translates to: SGVPSGKDKPGLGCPPIPGASSL*IWTWQL
Trigger: CAATTGCCAGGTCCAGATTCAGAGGGATGAGGCGCC...TGGGATGGGCGGGCACCCAAGCCCTGGCTTGTCCTTCCCAGAAGGTACCCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537502.5
CDS-3UTR GCA 90 bp ACCACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACAGAGCCCTCGCAGGCTaGCCAGCAGCCTCCCGACGC +
Preference number: 4 (lower is better)
Translates to: TTTQYLCTLQPTPPPGLHRALAG*PAASRR
Trigger: GCGTCGGGAGGCTGCTGGGCAGCCTGCGAGGGCTCT...GTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000432802.6
CDS-3UTR GCA 90 bp TGGGCTTCACAGGTTCACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGTGGCTGTGCTGCTGCTaGTGCAACTGCGGGAGCGCT +
Preference number: 4 (lower is better)
Translates to: WASQVHSPKRPAQPRPSGWLCCC*CNCGSA
Trigger: AGCGCTCCCGCAGTTGCAGCAGCAGCAGCACAGCCA...CCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTGAACCTGTGAAGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000432802.6
CDS-3UTR GCA 90 bp CACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGTACTCAGTGGCCCAGGGCACAGGCCAGCATTaGTGCCACAGCCAATGGGGA +
Preference number: 4 (lower is better)
Translates to: HSPKRPAQPRPSGYSVAQGTGQH*CHSQWG
Trigger: TCCCCATTGGCTGTGGCAGCAATGCTGGCCTGTGCC...CTGGGCCACTGAGTACCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp CTGCAGCCAACACCACCTCCTGGGCTTCACAGGTTCACTCACCCAAGAGGCCAGGCCACCAGGACATGCTaGACGGTGGGGCAGTGCTTC +
Preference number: 4 (lower is better)
Translates to: LQPTPPPGLHRFTHPRGQATRTC*TVGQCF
Trigger: GAAGCACTGCCCCACCGTGCAGCATGTCCTGGTGGC...CTGGCCTCTTGGGTGAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp TGGGCTTCACAGGTTCACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGGCCACCAGGACATGCTaGACGGTGGGGCAGTGCTTC +
Preference number: 4 (lower is better)
Translates to: WASQVHSPKRPAQPRPSGATRTC*TVGQCF
Trigger: GAAGCACTGCCCCACCGTGCAGCATGTCCTGGTGGC...CCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTGAACCTGTGAAGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp GGCTTCACAGGTTCACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGTACCACCAGCGTGCACCTaGTGTCCCCCACCACCCTGT +
Preference number: 4 (lower is better)
Translates to: GFTGSLTQEASTTTTEWVPPACT*CPPPPC
Trigger: ACAGGGTGGTGGGGGACAGCAGGTGCACGCTGGTGG...TACCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTGAACCTGTGAAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp CCCAACCACAGAGTGAAGGTCAGGCAGCGTTTGCCAGGATTTGGCTCTGACCAAGGGCCCCGGAGACGTTaGTGCCCTCCACGACGCTGC +
Preference number: 4 (lower is better)
Translates to: PNHRVKVRQRLPGFGSDQGPRRR*CPPRRC
Trigger: GCAGCGTCGTGGAGGGCAGCAACGTCTCCGGGGCCC...TTGGTCAGAGCCAAATCCTGGCAAACGCTGCCTGACCTTCACTCTGTGGTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp TCACAGGTTCACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGTACTCAGCCAGGCCTGGGAGATaGACAGGGCCCCGGAGACGT +
Preference number: 4 (lower is better)
Translates to: SQVHSPKRPAQPRPSGYSARPGR*TGPRRR
Trigger: ACGTCTCCGGGGCCCTGTGCATCTCCCAGGCCTGGC...TGAGTACCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTGAACCTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp ACCTTCTGGGAAGGACAAGCCAGGGCTTGGGTGCCCGCCCATCCCAAGAGCCCCGACACTCAGGATCTCTaGGATGATGCTGGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: TFWEGQARAWVPAHPKSPDTQDL*DDAGVL
Trigger: GAGGACCCCAGCATCATCGCAGAGATCCTGAGTGTC...GGGGCTCTTGGGATGGGCGGGCACCCAAGCCCTGGCTTGTCCTTCCCAGAAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR GCA 90 bp TGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACAGGTTCACTCACCCAATGGGCCTCCTTCCCCTaGCAACCGCCAGCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: CVPCSQHHLLGFTGSLTQWASFP*QPPAPA
Trigger: TGCAGGGGCTGGCGGTTGGCAGGGGAAGGAGGCCCA...TTGGGTGAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp GCACACACTCAGTGCTCCCACGGGCAGCGTCCAGCCGAGGGGGCGTGGCACACAAAGCCAAGGTTTTCATaGCTTTGTGCGCCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: AHTQCSHGQRPAEGAWHTKPRFS*LCAPLR
Trigger: TCTCAGGGGCGCACAAAGGCATGAAAACCTTGGCTT...TGTGTGCCACGCCCCCTCGGCTGGACGCTGCCCGTGGGAGCACTGAGTGTGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR GCA 90 bp ACCGCCAGCCCCTGCATGCCTAGCAGGGAGGTAAGCACCCACTGGCGTCGTGATAGTAGTTCCCGGCCATaGGGTGCGAAGTGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: TASPCMPSREVSTHWRRDSSSRP*GAKWRK
Trigger: CTTCCTCCACTTCGCACCGCATGGCCGGGAACTACT...ATCACGACGCCAGTGGGTGCTTACCTCCCTGCTAGGCATGCAGGGGCTGGCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537502.5
CDS-3UTR CCA 90 bp GTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACAGGTTCACTCACCCAAGCGCGGGATACGAGCCTaGCTGTGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VYPAANTTSWASQVHSPKRGIRA*LCCCCC
Trigger: GCAGCAGCAGCAGCACAGCCAGGCTCGTATCCCGCG...CTTGGGTGAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000432802.6
CDS-3UTR CCA 90 bp GGCTTCACAGGTTCACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGTACGCGGGATACGAGCCTaGCTGTGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GFTGSLTQEASTTTTEWVRGIRA*LCCCCC
Trigger: GCAGCAGCAGCAGCACAGCCAGGCTCGTATCCCGCG...TACCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTGAACCTGTGAAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000432802.6
CDS-3UTR CCA 90 bp CACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGTACTCAGTGGCCCAGACACGGTCCCCACGGTaGACTCCATGCCTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: HSPKRPAQPRPSGYSVAQTRSPR*TPCLFS
Trigger: GCTGAAGAGGCATGGAGTCCACCGTGGGGACCGTGT...CTGGGCCACTGAGTACCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp CACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGTACTCAGTGGCCCAGACTGCCCATGCTCTCTaGGGCGCAAACAGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: HSPKRPAQPRPSGYSVAQTAHAL*GANRVL
Trigger: GAGGACCCTGTTTGCGCCCCAGAGAGCATGGGCAGT...CTGGGCCACTGAGTACCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp ACCTTCTGGGAAGGACAAGCCAGGGCTTGGGTGCCCGCCCATCCCAAGAGCCCCTCCTGGGACCTCCAATaGATGGGAGAAAGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: TFWEGQARAWVPAHPKSPSWDLQ*MGERAL
Trigger: GAGAGCCCTTTCTCCCATCCATTGGAGGTCCCAGGA...GGGGCTCTTGGGATGGGCGGGCACCCAAGCCCTGGCTTGTCCTTCCCAGAAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CCA 90 bp ATGGAGAGAAACTGGCCCTTCGGGGAGTGCCATGGCTGGGCCCTCCCTGCCGGACGGTGGTGGGTGATATaGGGCGATGAGGACTTTCTC +
Preference number: 4 (lower is better)
Translates to: MERNWPFGECHGWALPAGRWWVI*GDEDFL
Trigger: GAGAAAGTCCTCATCGCCCCATATCACCCACCACCG...TCCGGCAGGGAGGGCCCAGCCATGGCACTCCCCGAAGGGCCAGTTTCTCTCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR CCA 90 bp CTGATGGAGAGAAACTGGCCCTTCGGGGAGTGCCATGGCTGGGCCCTCCCTGCCCTGATGGAGAGAAACTaGCCCTTCGGGGAGTGCCAT +
Preference number: 4 (lower is better)
Translates to: LMERNWPFGECHGWALPALMERN*PFGECH
Trigger: ATGGCACTCCCCGAAGGGCCAGTTTCTCTCCATCAG...GGCAGGGAGGGCCCAGCCATGGCACTCCCCGAAGGGCCAGTTTCTCTCCATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR TCA 90 bp CACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGTACTCAGTGGCCCAGCATCCATCCGCCCTGTaGTCTGGTAATAGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: HSPKRPAQPRPSGYSVAQHPSAL*SGNSRP
Trigger: AGGGCGGCTATTACCAGATCACAGGGCGGATGGATG...CTGGGCCACTGAGTACCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp CAAAAGACCACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGAGAGCCCTCGCAGGCTaGCCAGCAGCCTCCCGACGC +
Preference number: 4 (lower is better)
Translates to: QKTTTQYLCTLQPTPPPGRALAG*PAASRR
Trigger: GCGTCGGGAGGCTGCTGGGCAGCCTGCGAGGGCTCT...CCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTGGTCTTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000432802.6
CDS-3UTR GCA 90 bp CACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGTACTCAGTGGCCCAGATACGAGCCTGGCTGTaGTGCTGCTGCTGCAACTGC +
Preference number: 4 (lower is better)
Translates to: HSPKRPAQPRPSGYSVAQIRAWL*CCCCNC
Trigger: GCAGTTGCAGCAGCAGCAGCACAGCCAGGCTCGTAT...CTGGGCCACTGAGTACCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000432802.6
CDS-3UTR GCA 90 bp CTGGATCCAGACCTCCAAGTCTCATCATTGGACCTCAGTGGTTCTCACCGCCCCCCACCAGCGTGCACCTaGTGTCCCCCACCACCCTGT +
Preference number: 4 (lower is better)
Translates to: LDPDLQVSSLDLSGSHRPPPACT*CPPPPC
Trigger: ACAGGGTGGTGGGGGACAGCAGGTGCACGCTGGTGG...GGGGCGGTGAGAACCACTGAGGTCCAATGATGAGACTTGGAGGTCTGGATCCAG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp ACCGCCAGCCCCTGCATGCCTAGCAGGGAGGTAAGCACCCACTGGCGTCGTGATGTGGTGCGATGCAGATaGCACCTGTTTCTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: TASPCMPSREVSTHWRRDVVRCR*HLFLSA
Trigger: GGCAGACAGAAACAGGTGGCATCTGCATCGCACCAC...ATCACGACGCCAGTGGGTGCTTACCTCCCTGCTAGGCATGCAGGGGCTGGCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp CACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACAGCCCCGGAGACGTTGCTaGCCTCCACGACGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: HHSVFVYPAANTTSWASQPRRRC*PPRRCP
Trigger: AGGGCAGCGTCGTGGAGGGCAGCAACGTCTCCGGGG...CTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp CCCCCATGCCCAGGGCACAGCTTTGTTGCTAAGCCTGTAACAAAAGACCACCACCCCCGGAGACGTTGCTaGCCTCCACGACGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: PPCPGHSFVAKPVTKDHHPRRRC*PPRRCP
Trigger: AGGGCAGCGTCGTGGAGGGCAGCAACGTCTCCGGGG...GTGGTGGTCTTTTGTTACAGGCTTAGCAACAAAGCTGTGCCCTGGGCATGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp ACAGGTTCACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGTACTCAGTAAGCCAGGGCTTGGGTaGCCGCCCATCCCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: TGSLTQEASTTTTEWVLSKPGLG*PPIPRA
Trigger: GGCTCTTGGGATGGGCGGGCACCCAAGCCCTGGCTT...ACTGAGTACCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTGAACCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR GCA 90 bp TACTTAGCACACACTCAGTGCTCCCACGGGCAGCGTCCAGCCGAGGGGGCGTGGGTTTTCATGCCTTTGTaGGCCCCTGAGAGTGAACCC +
Preference number: 4 (lower is better)
Translates to: YLAHTQCSHGQRPAEGAWVFMPL*APESEP
Trigger: GGGTTCACTCTCAGGGGCGCACAAAGGCATGAAAAC...CCACGCCCCCTCGGCTGGACGCTGCCCGTGGGAGCACTGAGTGTGTGCTAAGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR GCA 90 bp CCAGGGCCATTTCAGTGTCATGGACCTGAAGCTGTCCTTAGCTTCCACAGGCTGGCGTGGCACACAACCTaGCTGCCCCAGGGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: PGPFQCHGPEAVLSFHRLAWHTT*LPQGPG
Trigger: GCCTGGACCCTGGGGCAGGCAGGTTGTGTGCCACGC...CAGCCTGTGGAAGCTAAGGACAGCTTCAGGTCCATGACACTGAAATGGCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR CCA 90 bp CCTGCAGCCAACACCACCTCCTGGGCTTCACAGGTTCACTCACCCAAGAGGCCATGGCCAGGCGGCACGTaGTCTCCAGTAGTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: PAANTTSWASQVHSPKRPWPGGT*SPVVPC
Trigger: ACAGGGAACTACTGGAGACCACGTGCCGCCTGGCCA...TGGCCTCTTGGGTGAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000432802.6
CDS-3UTR CCA 90 bp CTGGATCCAGACCTCCAAGTCTCATCATTGGACCTCAGTGGTTCTCACCGCCCCCACGTGAGGGCGGTGTaGGTCATGTGTGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: LDPDLQVSSLDLSGSHRPHVRAV*VMCGVG
Trigger: CCCCACCCCACACATGACCCACACCGCCCTCACGTG...GGGGCGGTGAGAACCACTGAGGTCCAATGATGAGACTTGGAGGTCTGGATCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CCA 90 bp CACAGACCGAACCGCTACTTAGCACACACTCAGTGCTCCCACGGGCAGCGTCCAAGTGAACCCCACCCCTaGAGTCTCAGCAGCACGCGA +
Preference number: 4 (lower is better)
Translates to: HRPNRYLAHTQCSHGQRPSEPHP*SLSSTR
Trigger: TCGCGTGCTGCTGAGACTCCAGGGGTGGGGTTCACT...TGGACGCTGCCCGTGGGAGCACTGAGTGTGTGCTAAGTAGCGGTTCGGTCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR CCA 90 bp ACTGGATCCAGACCTCCAAGTCTCATCATTGGACCTCAGTGGTTCTCACCGCCCTCTGTGCTCCCAGAGTaGGTGCCTCACGCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: TGSRPPSLIIGPQWFSPPSVLPE*VPHARG
Trigger: GCCCCGGGCGTGAGGCACCCACTCTGGGAGCACAGA...GGGCGGTGAGAACCACTGAGGTCCAATGATGAGACTTGGAGGTCTGGATCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432802.6
CDS-3UTR CCA 90 bp ACATGGTTTATGTTTAACCACACGTCTCCACAGGGCTCCAGCCCCGCTCACAGAGCAGGCAGATGGAGCTaGGCCCACCGTGGCGAGGGG +
Preference number: 4 (lower is better)
Translates to: TWFMFNHTSPQGSSPAHRAGRWS*AHRGEG
Trigger: CCCCTCGCCACGGTGGGCCCAGCTCCATCTGCCTGC...TCTGTGAGCGGGGCTGGAGCCCTGTGGAGACGTGTGGTTAAACATAAACCATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR TCA 90 bp GCCATGTCGCATAGCCTCTCCATGGGTGACACTCCTGGGACCTCCAATGGATGGCGATCTTGCCAGTGCTaGAGTCGCAGTCCCAGACGG +
Preference number: 4 (lower is better)
Translates to: AMSHSLSMGDTPGTSNGWRSCQC*SRSPRR
Trigger: CCGTCTGGGACTGCGACTTCAGCACTGGCAAGATCG...CCATCCATTGGAGGTCCCAGGAGTGTCACCCATGGAGAGGCTATGCGACATGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323482.9
CDS-3UTR TCA 90 bp CACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGTACTCAGTGGCCCAGAAGCCCCGTCTCCAGTaGAGTAATAGCCTGGGTAGG +
Preference number: 4 (lower is better)
Translates to: HSPKRPAQPRPSGYSVAQKPRLQ*SNSLGR
Trigger: CCTACCCAGGCTATTACTTCACTGGAGACGGGGCTT...CTGGGCCACTGAGTACCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR TCA 90 bp TGGGCTTCACAGGTTCACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGCATCCATCCGCCCTGTaGTCTGGTAATAGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: WASQVHSPKRPAQPRPSGHPSAL*SGNSRP
Trigger: AGGGCGGCTATTACCAGATCACAGGGCGGATGGATG...CCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTGAACCTGTGAAGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR TCA 90 bp ACAGGTTCACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGTACTCAGTCAGCCCAGCTTCACGTaGGGGCGGTGTGGGTCATGT +
Preference number: 4 (lower is better)
Translates to: TGSLTQEASTTTTEWVLSQPSFT*GRCGSC
Trigger: ACATGACCCACACCGCCCTCACGTGAAGCTGGGCTG...ACTGAGTACCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTGAACCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR GCA 90 bp CACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACAGCTCCCGGGCTGCCTGTaGACTCAGCGCGGGATACGA +
Preference number: 4 (lower is better)
Translates to: HHSVFVYPAANTTSWASQLPGCL*TQRGIR
Trigger: TCGTATCCCGCGCTGAGTGCACAGGCAGCCCGGGAG...CTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000432802.6
CDS-3UTR GCA 90 bp TGGTTCTCACCGCCCCAACCACAGAGTGAAGGTCAGGCAGCGTTTGCCAGGATTGCCACCAGGACATGCTaGACGGTGGGGCAGTGCTTC +
Preference number: 4 (lower is better)
Translates to: WFSPPQPQSEGQAAFARIATRTC*TVGQCF
Trigger: GAAGCACTGCCCCACCGTGCAGCATGTCCTGGTGGC...AATCCTGGCAAACGCTGCCTGACCTTCACTCTGTGGTTGGGGCGGTGAGAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp GTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACAGGTTCACTCACCCAAGTTCCGAGGGCCGTGGTaGGATGCAGATGCCACCTGT +
Preference number: 4 (lower is better)
Translates to: VYPAANTTSWASQVHSPKFRGPW*DADATC
Trigger: ACAGGTGGCATCTGCATCGCACCACGGCCCTCGGAA...CTTGGGTGAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp GGTTCTCACCGCCCCAACCACAGAGTGAAGGTCAGGCAGCGTTTGCCAGGATTTAGGGCCTCATCGCCATaGCAGGGAGGATTTCCGCCC +
Preference number: 4 (lower is better)
Translates to: GSHRPNHRVKVRQRLPGFRASSP*QGGFPP
Trigger: GGGCGGAAATCCTCCCTGCCATGGCGATGAGGCCCT...AAATCCTGGCAAACGCTGCCTGACCTTCACTCTGTGGTTGGGGCGGTGAGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp ACTGGATCCAGACCTCCAAGTCTCATCATTGGACCTCAGTGGTTCTCACCGCCCCGCCATAGATGGTCCTaGCCATGCCCGGCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: TGSRPPSLIIGPQWFSPPRHRWS*PCPARP
Trigger: AGGCCTGGCCGGGCATGGCCAGGACCATCTATGGCG...GGGCGGTGAGAACCACTGAGGTCCAATGATGAGACTTGGAGGTCTGGATCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp ACTGGATCCAGACCTCCAAGTCTCATCATTGGACCTCAGTGGTTCTCACCGCCCGGTGGTCGCCATAGATaGTCCTGGCCATGCCCGGCC +
Preference number: 4 (lower is better)
Translates to: TGSRPPSLIIGPQWFSPPGGRHR*SWPCPA
Trigger: GGCCGGGCATGGCCAGGACCATCTATGGCGACCACC...GGGCGGTGAGAACCACTGAGGTCCAATGATGAGACTTGGAGGTCTGGATCCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR TCA 90 bp GGCTTCACAGGTTCACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGTATCTAGGCAGGCTACCTaGGCTCTCTGTGCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: GFTGSLTQEASTTTTEWVSRQAT*ALCAPR
Trigger: TCTGGGAGCACAGAGAGCTCAGGTAGCCTGCCTAGA...TACCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTGAACCTGTGAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000432802.6
CDS-3UTR TCA 90 bp CTGCAGCCAACACCACCTCCTGGGCTTCACAGGTTCACTCACCCAAGAGGCCAGTTGTTGTCTGTCCTGTaGGCCACCAGGACATGCTGC +
Preference number: 4 (lower is better)
Translates to: LQPTPPPGLHRFTHPRGQLLSVL*ATRTCC
Trigger: GCAGCATGTCCTGGTGGCTCACAGGACAGACAACAA...CTGGCCTCTTGGGTGAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR TCA 90 bp CCCAACCACAGAGTGAAGGTCAGGCAGCGTTTGCCAGGATTTGGCTCTGACCAACCCAGGCCTCACAGTTaGTGGGCTCTCCCACTGACC +
Preference number: 4 (lower is better)
Translates to: PNHRVKVRQRLPGFGSDQPRPHS*WALPLT
Trigger: GGTCAGTGGGAGAGCCCATCAACTGTGAGGCCTGGG...TTGGTCAGAGCCAAATCCTGGCAAACGCTGCCTGACCTTCACTCTGTGGTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR TCA 90 bp GGCTTCACAGGTTCACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGTATGCCCTTCTCATCCATaGGGACGGGGACGATGCCAA +
Preference number: 4 (lower is better)
Translates to: GFTGSLTQEASTTTTEWVCPSHP*GRGRCQ
Trigger: TTGGCATCGTCCCCGTCCTCATGGATGAGAAGGGCA...TACCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTGAACCTGTGAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR TCA 90 bp TCACAGGTTCACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGTACTCAGCCCCAACCACAGAGTaGAGGTCAGGCAGCGTTTGC +
Preference number: 4 (lower is better)
Translates to: SQVHSPKRPAQPRPSGYSAPTTE*RSGSVC
Trigger: GCAAACGCTGCCTGACCTTCACTCTGTGGTTGGGGC...TGAGTACCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTGAACCTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR TCA 90 bp GGTTCTCACCGCCCCAACCACAGAGTGAAGGTCAGGCAGCGTTTGCCAGGATTTACTGCCACAAGGCCCTaGAGGGTAGACTGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: GSHRPNHRVKVRQRLPGFTATRP*RVDCGA
Trigger: TGCCCCACAGTCTACCCTTCAGGGCCTTGTGGCAGT...AAATCCTGGCAAACGCTGCCTGACCTTCACTCTGTGGTTGGGGCGGTGAGAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR TCA 90 bp ACAGGTTCACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGTACTCAGTACTGCCACAAGGCCCTaGAGGGTAGACTGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: TGSLTQEASTTTTEWVLSTATRP*RVDCGA
Trigger: TGCCCCACAGTCTACCCTTCAGGGCCTTGTGGCAGT...ACTGAGTACCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTGAACCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp CCAGGGCCATTTCAGTGTCATGGACCTGAAGCTGTCCTTAGCTTCCACAGGCTGTGGCTGTGCTGCTGCTaGTGCAACTGCGGGAGCGCT +
Preference number: 4 (lower is better)
Translates to: PGPFQCHGPEAVLSFHRLWLCCC*CNCGSA
Trigger: AGCGCTCCCGCAGTTGCAGCAGCAGCAGCACAGCCA...CAGCCTGTGGAAGCTAAGGACAGCTTCAGGTCCATGACACTGAAATGGCCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR GCA 90 bp ACAGGTTCACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGTACTCAGTAGAGCATGTCCTCACTaGCCATGCTCTCTGGGGCGC +
Preference number: 4 (lower is better)
Translates to: TGSLTQEASTTTTEWVLSRACPH*PCSLGR
Trigger: GCGCCCCAGAGAGCATGGGCAGTGAGGACATGCTCT...ACTGAGTACCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTGAACCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp GGTTCTCACCGCCCCAACCACAGAGTGAAGGTCAGGCAGCGTTTGCCAGGATTTCCTGGGTATGGACGATaGCCTTGGGCATTCCGGTGC +
Preference number: 4 (lower is better)
Translates to: GSHRPNHRVKVRQRLPGFPGYGR*PWAFRC
Trigger: GCACCGGAATGCCCAAGGGCATCGTCCATACCCAGG...AAATCCTGGCAAACGCTGCCTGACCTTCACTCTGTGGTTGGGGCGGTGAGAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp CCTGCAGCCAACACCACCTCCTGGGCTTCACAGGTTCACTCACCCAAGAGGCCAATAGAGCAGGTAGCCTaGCTGGGTATGGACGATGCC +
Preference number: 4 (lower is better)
Translates to: PAANTTSWASQVHSPKRPIEQVA*LGMDDA
Trigger: GGCATCGTCCATACCCAGGCAGGCTACCTGCTCTAT...TGGCCTCTTGGGTGAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp CAAAGAGAGACTGGATCCAGACCTCCAAGTCTCATCATTGGACCTCAGTGGTTCGGGCCCCGGAGACGTTaGTGCCCTCCACGACGCTGC +
Preference number: 4 (lower is better)
Translates to: QRETGSRPPSLIIGPQWFGPRRR*CPPRRC
Trigger: GCAGCGTCGTGGAGGGCAGCAACGTCTCCGGGGCCC...GAACCACTGAGGTCCAATGATGAGACTTGGAGGTCTGGATCCAGTCTCTCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp CACAGAGTGAAGGTCAGGCAGCGTTTGCCAGGATTTGGCTCTGACCAAGTTAGTGCCAGGCCTGGGAGATaGACAGGGCCCCGGAGACGT +
Preference number: 4 (lower is better)
Translates to: HRVKVRQRLPGFGSDQVSARPGR*TGPRRR
Trigger: ACGTCTCCGGGGCCCTGTGCATCTCCCAGGCCTGGC...ACTAACTTGGTCAGAGCCAAATCCTGGCAAACGCTGCCTGACCTTCACTCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR GCA 90 bp GGCTTCACAGGTTCACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGTAAGCACTTTCTGGTACTaGAGGGTGGTCGGCGATGGC +
Preference number: 4 (lower is better)
Translates to: GFTGSLTQEASTTTTEWVSTFWY*RVVGDG
Trigger: GCCATCGCCGACCACCCTGCAGTACCAGAAAGTGCT...TACCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTGAACCTGTGAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR GCA 90 bp ACCGCCAGCCCCTGCATGCCTAGCAGGGAGGTAAGCACCCACTGGCGTCGTGATATGGACTTGAGCTCCTaGACCACCACATCTGAGTCA +
Preference number: 4 (lower is better)
Translates to: TASPCMPSREVSTHWRRDMDLSS*TTTSES
Trigger: TGACTCAGATGTGGTGGTGCAGGAGCTCAAGTCCAT...ATCACGACGCCAGTGGGTGCTTACCTCCCTGCTAGGCATGCAGGGGCTGGCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR GCA 90 bp TGGGCTTCACAGGTTCACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGGACACTCAGGATCTCTaGGATGATGCTGGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: WASQVHSPKRPAQPRPSGDTQDL*DDAGVL
Trigger: GAGGACCCCAGCATCATCGCAGAGATCCTGAGTGTC...CCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTGAACCTGTGAAGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR GCA 90 bp TCAGGGGTACCTTCTGGGAAGGACAAGCCAGGGCTTGGGTGCCCGCCCATCCCACAGCCTGCTTGTCCTTaGACTTCTGGTAGACACTCA +
Preference number: 4 (lower is better)
Translates to: SGVPSGKDKPGLGCPPIPQPACP*TSGRHS
Trigger: TGAGTGTCTACCAGAAGTGCAAGGACAAGCAGGCTG...TGGGATGGGCGGGCACCCAAGCCCTGGCTTGTCCTTCCCAGAAGGTACCCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR GCA 90 bp ACCGCCAGCCCCTGCATGCCTAGCAGGGAGGTAAGCACCCACTGGCGTCGTGATCAGCCTGCTTGTCCTTaGACTTCTGGTAGACACTCA +
Preference number: 4 (lower is better)
Translates to: TASPCMPSREVSTHWRRDQPACP*TSGRHS
Trigger: TGAGTGTCTACCAGAAGTGCAAGGACAAGCAGGCTG...ATCACGACGCCAGTGGGTGCTTACCTCCCTGCTAGGCATGCAGGGGCTGGCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR GCA 90 bp ACCGCCAGCCCCTGCATGCCTAGCAGGGAGGTAAGCACCCACTGGCGTCGTGATCTCACCAGGAAAAGATaGCGGAGGCTTGGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: TASPCMPSREVSTHWRRDLTRKR*RRLGSS
Trigger: AGAACTTCCAAGCCTCCGGCATCTTTTCCTGGTGAG...ATCACGACGCCAGTGGGTGCTTACCTCCCTGCTAGGCATGCAGGGGCTGGCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR GCA 90 bp CTGCAGCCAACACCACCTCCTGGGCTTCACAGGTTCACTCACCCAAGAGGCCAGAGGTCAGGCAGCGTTTaGCAGGATTTGGCTCTGACC +
Preference number: 4 (lower is better)
Translates to: LQPTPPPGLHRFTHPRGQRSGSV*QDLALT
Trigger: GGTCAGAGCCAAATCCTGGCAAACGCTGCCTGACCT...CTGGCCTCTTGGGTGAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp GTAGCTTCAGAACTAAGGCGGCCACATTCACCCCACCGCTTAGGAGTTAGCTCCCCAACCGCCAGCCCCTaGATGCCTAGCAGGGAGGTA +
Preference number: 4 (lower is better)
Translates to: VASELRRPHSPHRLGVSSPTASP*MPSREV
Trigger: TACCTCCCTGCTAGGCATGCAGGGGCTGGCGGTTGG...GGAGCTAACTCCTAAGCGGTGGGGTGAATGTGGCCGCCTTAGTTCTGAAGCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR GCA 90 bp TTCTCAGAAGGGGCTTTGTTCGCAGGCAGATGGAGCTGGGCCCACCGTGGCGAGCTCACCATCCCAAAGTaGTGGGATTACCGGCATGAG +
Preference number: 4 (lower is better)
Translates to: FSEGALFAGRWSWAHRGELTIPK*WDYRHE
Trigger: CTCATGCCGGTAATCCCAGCACTTTGGGATGGTGAG...CTCGCCACGGTGGGCCCAGCTCCATCTGCCTGCGAACAAAGCCCCTTCTGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR CCA 90 bp CCATTTCAGTGTCATGGACCTGAAGCTGTCCTTAGCTTCCACAGGCTGGCTGTGCGCGGGATACGAGCCTaGCTGTGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PFQCHGPEAVLSFHRLAVRGIRA*LCCCCC
Trigger: GCAGCAGCAGCAGCACAGCCAGGCTCGTATCCCGCG...CACAGCCAGCCTGTGGAAGCTAAGGACAGCTTCAGGTCCATGACACTGAAATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR CCA 90 bp AGACTGGATCCAGACCTCCAAGTCTCATCATTGGACCTCAGTGGTTCTCACCGCCGCCATAGATGGTCCTaGCCATGCCCGGCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: RLDPDLQVSSLDLSGSHRRHRWS*PCPARP
Trigger: AGGCCTGGCCGGGCATGGCCAGGACCATCTATGGCG...GCGGTGAGAACCACTGAGGTCCAATGATGAGACTTGGAGGTCTGGATCCAGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp CAAAAGACCACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCGCCATAGATGGTCCTaGCCATGCCCGGCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: QKTTTQYLCTLQPTPPPGRHRWS*PCPARP
Trigger: AGGCCTGGCCGGGCATGGCCAGGACCATCTATGGCG...CCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTGGTCTTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp AAGACCACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTGGTGGTCGCCATAGATaGTCCTGGCCATGCCCGGCC +
Preference number: 4 (lower is better)
Translates to: KTTTQYLCTLQPTPPPGLGGRHR*SWPCPA
Trigger: GGCCGGGCATGGCCAGGACCATCTATGGCGACCACC...AAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTGGTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp GTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACAGGTTCACTCACCCAAGCTCAGGGGTACCTTCTaGGAAGGACAAGCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: VYPAANTTSWASQVHSPKLRGTF*EGQARA
Trigger: AGCCCTGGCTTGTCCTTCCCAGAAGGTACCCCTGAG...CTTGGGTGAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CCA 90 bp ACCACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACGGTGTGGGTCATGTGTaGGGTGGGGGCTGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: TTTQYLCTLQPTPPPGLHGVGHV*GGGCFW
Trigger: CCAGAAGCAGCCCCCACCCCACACATGACCCACACC...GTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CCA 90 bp CCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACAGGTGGTGTGGGTCATGTGTaGGGTGGGGGCTGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: PLSICVPCSQHHLLGFTGGVGHV*GGGCFW
Trigger: CCAGAAGCAGCCCCCACCCCACACATGACCCACACC...ACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CCA 90 bp GTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACAGGTTCACTCACCCAAGCGCATAGCCTCTCCATaGGTGACACTCCTGGGACCT +
Preference number: 4 (lower is better)
Translates to: VYPAANTTSWASQVHSPKRIASP*VTLLGP
Trigger: AGGTCCCAGGAGTGTCACCCATGGAGAGGCTATGCG...CTTGGGTGAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CCA 90 bp CCAGGGCCATTTCAGTGTCATGGACCTGAAGCTGTCCTTAGCTTCCACAGGCTGCCTGCTGGGGGTCGGTaGTGGGTGATATGGGGCGAT +
Preference number: 4 (lower is better)
Translates to: PGPFQCHGPEAVLSFHRLPAGGR*WVIWGD
Trigger: ATCGCCCCATATCACCCACCACCGACCCCCAGCAGG...CAGCCTGTGGAAGCTAAGGACAGCTTCAGGTCCATGACACTGAAATGGCCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR CCA 90 bp CCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACAGGTAAGGCCCTTTCTCTCTaGGCGGGGCAGACCACCAGC +
Preference number: 4 (lower is better)
Translates to: PLSICVPCSQHHLLGFTGKALSL*AGQTTS
Trigger: GCTGGTGGTCTGCCCCGCCCAGAGAGAAAGGGCCTT...ACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537502.5
CDS-3UTR TCA 90 bp TCACAGGTTCACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGTACTCATCTAGGCAGGCTACCTaGGCTCTCTGTGCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: SQVHSPKRPAQPRPSGYSSRQAT*ALCAPR
Trigger: TCTGGGAGCACAGAGAGCTCAGGTAGCCTGCCTAGA...TGAGTACCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTGAACCTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000432802.6
CDS-3UTR TCA 90 bp CTGCAGCCAACACCACCTCCTGGGCTTCACAGGTTCACTCACCCAAGAGGCCAGGTAGTTCCCTGTAGGTaGTCCTCACTTCCGTTCCAG +
Preference number: 4 (lower is better)
Translates to: LQPTPPPGLHRFTHPRGQVVPCR*SSLPFQ
Trigger: CTGGAACGGAAGTGAGGATCACCTACAGGGAACTAC...CTGGCCTCTTGGGTGAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000432802.6
CDS-3UTR TCA 90 bp TCACAGGTTCACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGTACTCATCAGGATCTCTGCGATaGTGCTGGGGTCCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: SQVHSPKRPAQPRPSGYSSGSLR*CWGPPR
Trigger: CCTTGGAGGACCCCAGCATCATCGCAGAGATCCTGA...TGAGTACCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTGAACCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR TCA 90 bp AGACTGGATCCAGACCTCCAAGTCTCATCATTGGACCTCAGTGGTTCTCACCGCCAGCCCAGCTTCACGTaGGGGCGGTGTGGGTCATGT +
Preference number: 4 (lower is better)
Translates to: RLDPDLQVSSLDLSGSHRQPSFT*GRCGSC
Trigger: ACATGACCCACACCGCCCTCACGTGAAGCTGGGCTG...GCGGTGAGAACCACTGAGGTCCAATGATGAGACTTGGAGGTCTGGATCCAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR GCA 90 bp GGTTCTCACCGCCCCAACCACAGAGTGAAGGTCAGGCAGCGTTTGCCAGGATTTTGCACGGTGGGGCAGTaGTTCACAGCCTCATCCACT +
Preference number: 4 (lower is better)
Translates to: GSHRPNHRVKVRQRLPGFCTVGQ*FTASST
Trigger: AGTGGATGAGGCTGTGAAGCACTGCCCCACCGTGCA...AAATCCTGGCAAACGCTGCCTGACCTTCACTCTGTGGTTGGGGCGGTGAGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp CTGGATCCAGACCTCCAAGTCTCATCATTGGACCTCAGTGGTTCTCACCGCCCCCCTTGGGCATTCCGGTaGTCCCTGAGGTGTACAGCA +
Preference number: 4 (lower is better)
Translates to: LDPDLQVSSLDLSGSHRPPWAFR*SLRCTA
Trigger: TGCTGTACACCTCAGGGAGCACCGGAATGCCCAAGG...GGGGCGGTGAGAACCACTGAGGTCCAATGATGAGACTTGGAGGTCTGGATCCAG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp TGGTTCTCACCGCCCCAACCACAGAGTGAAGGTCAGGCAGCGTTTGCCAGGATTAGCACTTTCTGGTACTaGAGGGTGGTCGGCGATGGC +
Preference number: 4 (lower is better)
Translates to: WFSPPQPQSEGQAAFARISTFWY*RVVGDG
Trigger: GCCATCGCCGACCACCCTGCAGTACCAGAAAGTGCT...AATCCTGGCAAACGCTGCCTGACCTTCACTCTGTGGTTGGGGCGGTGAGAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR GCA 90 bp AGACTGGATCCAGACCTCCAAGTCTCATCATTGGACCTCAGTGGTTCTCACCGCCCAACCGCCAGCCCCTaGATGCCTAGCAGGGAGGTA +
Preference number: 4 (lower is better)
Translates to: RLDPDLQVSSLDLSGSHRPTASP*MPSREV
Trigger: TACCTCCCTGCTAGGCATGCAGGGGCTGGCGGTTGG...GCGGTGAGAACCACTGAGGTCCAATGATGAGACTTGGAGGTCTGGATCCAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp GTCTCATCATTGGACCTCAGTGGTTCTCACCGCCCCAACCACAGAGTGAAGGTCCCCGAACACTGGCACTaGCACAAGGCCCTGAAGGGT +
Preference number: 4 (lower is better)
Translates to: VSSLDLSGSHRPNHRVKVPEHWH*HKALKG
Trigger: ACCCTTCAGGGCCTTGTGGCAGTGCCAGTGTTCGGG...GACCTTCACTCTGTGGTTGGGGCGGTGAGAACCACTGAGGTCCAATGATGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp TCAAGTTCCTTCTCAGAAGGGGCTTTGTTCGCAGGCAGATGGAGCTGGGCCCACAGGGCAGAAGAATGCTaGTGGCCTATGGGCCACACG +
Preference number: 4 (lower is better)
Translates to: SSSFSEGALFAGRWSWAHRAEEC*WPMGHT
Trigger: CGTGTGGCCCATAGGCCAGCAGCATTCTTCTGCCCT...GTGGGCCCAGCTCCATCTGCCTGCGAACAAAGCCCCTTCTGAGAAGGAACTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR GCA 90 bp TCAAGTTCCTTCTCAGAAGGGGCTTTGTTCGCAGGCAGATGGAGCTGGGCCCACTCCAGGGCAGAAGAATaGTGCTGGCCTATGGGCCAC +
Preference number: 4 (lower is better)
Translates to: SSSFSEGALFAGRWSWAHSRAEE*CWPMGH
Trigger: GTGGCCCATAGGCCAGCAGCATTCTTCTGCCCTGGA...GTGGGCCCAGCTCCATCTGCCTGCGAACAAAGCCCCTTCTGAGAAGGAACTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR GCA 90 bp GGTTCTCACCGCCCCAACCACAGAGTGAAGGTCAGGCAGCGTTTGCCAGGATTTTTCCCGGCCATGCGGTaGGAAGTGGAGGAAGTGGAA +
Preference number: 4 (lower is better)
Translates to: GSHRPNHRVKVRQRLPGFFPAMR*EVEEVE
Trigger: TTCCACTTCCTCCACTTCGCACCGCATGGCCGGGAA...AAATCCTGGCAAACGCTGCCTGACCTTCACTCTGTGGTTGGGGCGGTGAGAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537502.5
CDS-3UTR CCA 90 bp GTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACAGGTTCACTCAGCCTCTTCAGCGTGTTaGCCAGGCGGCACGTGGTCT +
Preference number: 4 (lower is better)
Translates to: VFVYPAANTTSWASQVHSASSAC*PGGTWS
Trigger: AGACCACGTGCCGCCTGGCCAACACGCTGAAGAGGC...TGAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp TCACAGGTTCACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGTACTCAACACGGGCATGTAGATaGCAACACGGTCCCCACGGT +
Preference number: 4 (lower is better)
Translates to: SQVHSPKRPAQPRPSGYSTRACR*QHGPHG
Trigger: ACCGTGGGGACCGTGTTGCCATCTACATGCCCGTGT...TGAGTACCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTGAACCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp CACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACAGGGACAGCTCCGATCCTaGCACAGGCCAGCATTGCTG +
Preference number: 4 (lower is better)
Translates to: HHSVFVYPAANTTSWASQGQLRS*HRPALL
Trigger: CAGCAATGCTGGCCTGTGCCAGGATCGGAGCTGTCC...CTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp ACCACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACTTCTTCCGAGGGCCGTaGTGCGATGCAGATGCCACC +
Preference number: 4 (lower is better)
Translates to: TTTQYLCTLQPTPPPGLHFFRGP*CDADAT
Trigger: GGTGGCATCTGCATCGCACCACGGCCCTCGGAAGAA...GTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp CCCAACCACAGAGTGAAGGTCAGGCAGCGTTTGCCAGGATTTGGCTCTGACCAATTCTTCCGAGGGCCGTaGTGCGATGCAGATGCCACC +
Preference number: 4 (lower is better)
Translates to: PNHRVKVRQRLPGFGSDQFFRGP*CDADAT
Trigger: GGTGGCATCTGCATCGCACCACGGCCCTCGGAAGAA...TTGGTCAGAGCCAAATCCTGGCAAACGCTGCCTGACCTTCACTCTGTGGTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp GTCTCATCATTGGACCTCAGTGGTTCTCACCGCCCCAACCACAGAGTGAAGGTCGCGGTCCCCAGCCGGTaGCCACTGATGTTGATGACA +
Preference number: 4 (lower is better)
Translates to: VSSLDLSGSHRPNHRVKVAVPSR*PLMLMT
Trigger: TGTCATCAACATCAGTGGCCACCGGCTGGGGACCGC...GACCTTCACTCTGTGGTTGGGGCGGTGAGAACCACTGAGGTCCAATGATGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CCA 90 bp AGACCACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCGCGGTCCCCAGCCGGTaGCCACTGATGTTGATGACA +
Preference number: 4 (lower is better)
Translates to: RPPLSICVPCSQHHLLGFAVPSR*PLMLMT
Trigger: TGTCATCAACATCAGTGGCCACCGGCTGGGGACCGC...GAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CCA 90 bp AAGACCACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCAGGGTGGTCGGCGATaGCGTCCTCAATCTCTGCGG +
Preference number: 4 (lower is better)
Translates to: KTTTQYLCTLQPTPPPGLQGGRR*RPQSLR
Trigger: CCGCAGAGATTGAGGACGCCATCGCCGACCACCCTG...AAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTGGTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CCA 90 bp GAGAGACTGGATCCAGACCTCCAAGTCTCATCATTGGACCTCAGTGGTTCTCACCACGTGAGGGCGGTGTaGGTCATGTGTGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: ERLDPDLQVSSLDLSGSHHVRAV*VMCGVG
Trigger: CCCCACCCCACACATGACCCACACCGCCCTCACGTG...GTGAGAACCACTGAGGTCCAATGATGAGACTTGGAGGTCTGGATCCAGTCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CCA 90 bp TCAGGGGTACCTTCTGGGAAGGACAAGCCAGGGCTTGGGTGCCCGCCCATCCCAAAGAGGGCAGAGGAATaGAGATGGCAATGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: SGVPSGKDKPGLGCPPIPKRAEE*RWQCLF
Trigger: GAAAAGGCATTGCCATCTCCATTCCTCTGCCCTCTT...TGGGATGGGCGGGCACCCAAGCCCTGGCTTGTCCTTCCCAGAAGGTACCCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CCA 90 bp GTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACAGGTTCACTCACCCAAGCTCACCTTCCTGTGCTaGCTCAAGAGGGCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: VYPAANTTSWASQVHSPKLTFLC*LKRAEE
Trigger: TTCCTCTGCCCTCTTGAGCCAGCACAGGAAGGTGAG...CTTGGGTGAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CCA 90 bp CACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGTACTCAGTGGCCCAGCTGAAGGGTAGACTGTaGGGCAAAGAGGACAAACTC +
Preference number: 4 (lower is better)
Translates to: HSPKRPAQPRPSGYSVAQLKGRL*GKEDKL
Trigger: GAGTTTGTCCTCTTTGCCCCACAGTCTACCCTTCAG...CTGGGCCACTGAGTACCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR TCA 90 bp CCATGTCCAGGTTCCTCTCAGCAACATGGAAAGCTAAGCCATTTCACAAACGCAGATGGGCTCTCCCACTaGCCCCAGGGTCCGCAGGGA +
Preference number: 4 (lower is better)
Translates to: PCPGSSQQHGKLSHFTNADGLSH*PQGPQG
Trigger: TCCCTGCGGACCCTGGGGTCAGTGGGAGAGCCCATC...TGCGTTTGTGAAATGGCTTAGCTTTCCATGTTGCTGAGAGGAACCTGGACATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR TCA 90 bp AACAAAGAGAGACTGGATCCAGACCTCCAAGTCTCATCATTGGACCTCAGTGGTGATGGGCTCTCCCACTaGCCCCAGGGTCCGCAGGGA +
Preference number: 4 (lower is better)
Translates to: NKERLDPDLQVSSLDLSGDGLSH*PQGPQG
Trigger: TCCCTGCGGACCCTGGGGTCAGTGGGAGAGCCCATC...ACCACTGAGGTCCAATGATGAGACTTGGAGGTCTGGATCCAGTCTCTCTTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR TCA 90 bp CAGGGGTACCTTCTGGGAAGGACAAGCCAGGGCTTGGGTGCCCGCCCATCCCAATATCTTTCACCACAATaGAGGCAAAGGCAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: QGYLLGRTSQGLGARPSQYLSPQ*RQRQLL
Trigger: GAGAAGCTGCCTTTGCCTTCATTGTGGTGAAAGATA...TTGGGATGGGCGGGCACCCAAGCCCTGGCTTGTCCTTCCCAGAAGGTACCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR TCA 90 bp CCCAACCACAGAGTGAAGGTCAGGCAGCGTTTGCCAGGATTTGGCTCTGACCAATGGCCACCATGGACTTaGGCTCCTGCACCACCACAT +
Preference number: 4 (lower is better)
Translates to: PNHRVKVRQRLPGFGSDQWPPWT*APAPPH
Trigger: ATGTGGTGGTGCAGGAGCTCAAGTCCATGGTGGCCA...TTGGTCAGAGCCAAATCCTGGCAAACGCTGCCTGACCTTCACTCTGTGGTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR GCA 90 bp AGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACAGGTTCACTCCCACGGTGGACTCCATaGCTCTTCAGCGTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: SICVPCSQHHLLGFTGSLPRWTP*LFSVLA
Trigger: GGCCAACACGCTGAAGAGGCATGGAGTCCACCGTGG...GAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp CCCAACCACAGAGTGAAGGTCAGGCAGCGTTTGCCAGGATTTGGCTCTGACCAATGTCCTCACTGCCCATaGTCTCTGGGGCGCAAACAG +
Preference number: 4 (lower is better)
Translates to: PNHRVKVRQRLPGFGSDQCPHCP*SLGRKQ
Trigger: CTGTTTGCGCCCCAGAGAGCATGGGCAGTGAGGACA...TTGGTCAGAGCCAAATCCTGGCAAACGCTGCCTGACCTTCACTCTGTGGTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp AGACCACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCTGTCCTCACTGCCCATaGTCTCTGGGGCGCAAACAG +
Preference number: 4 (lower is better)
Translates to: RPPLSICVPCSQHHLLGFCPHCP*SLGRKQ
Trigger: CTGTTTGCGCCCCAGAGAGCATGGGCAGTGAGGACA...GAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp AGACTGGATCCAGACCTCCAAGTCTCATCATTGGACCTCAGTGGTTCTCACCGCAGAGCATGTCCTCACTaGCCATGCTCTCTGGGGCGC +
Preference number: 4 (lower is better)
Translates to: RLDPDLQVSSLDLSGSHRRACPH*PCSLGR
Trigger: GCGCCCCAGAGAGCATGGGCAGTGAGGACATGCTCT...GCGGTGAGAACCACTGAGGTCCAATGATGAGACTTGGAGGTCTGGATCCAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp AAGACCACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTAGAGCATGTCCTCACTaGCCATGCTCTCTGGGGCGC +
Preference number: 4 (lower is better)
Translates to: KTTTQYLCTLQPTPPPGLRACPH*PCSLGR
Trigger: GCGCCCCAGAGAGCATGGGCAGTGAGGACATGCTCT...AAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTGGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp ACCACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACCCTTGGGCATTCCGGTaGTCCCTGAGGTGTACAGCA +
Preference number: 4 (lower is better)
Translates to: TTTQYLCTLQPTPPPGLHPWAFR*SLRCTA
Trigger: TGCTGTACACCTCAGGGAGCACCGGAATGCCCAAGG...GTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp AGACCACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCAGGGCCGTGGTGCGATaGAGATGCCACCTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: RPPLSICVPCSQHHLLGFRAVVR*RCHLFL
Trigger: CAGAAACAGGTGGCATCTGCATCGCACCACGGCCCT...GAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTGGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp CTCCAAGTCTCATCATTGGACCTCAGTGGTTCTCACCGCCCCAACCACAGAGTGAGGGCCGTGGTGCGATaGAGATGCCACCTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: LQVSSLDLSGSHRPNHRVRAVVR*RCHLFL
Trigger: CAGAAACAGGTGGCATCTGCATCGCACCACGGCCCT...CACTCTGTGGTTGGGGCGGTGAGAACCACTGAGGTCCAATGATGAGACTTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp CAAAAGACCACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGTTCCGAGGGCCGTGGTaGGATGCAGATGCCACCTGT +
Preference number: 4 (lower is better)
Translates to: QKTTTQYLCTLQPTPPPGFRGPW*DADATC
Trigger: ACAGGTGGCATCTGCATCGCACCACGGCCCTCGGAA...CCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTGGTCTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp CCAGGTTCCTCTCAGCAACATGGAAAGCTAAGCCATTTCACAAACGCACAACTGCCCCGGAGACGTTGCTaGCCTCCACGACGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: PGSSQQHGKLSHFTNAQLPRRRC*PPRRCP
Trigger: AGGGCAGCGTCGTGGAGGGCAGCAACGTCTCCGGGG...CAGTTGTGCGTTTGTGAAATGGCTTAGCTTTCCATGTTGCTGAGAGGAACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp AGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACAGGTTCACTCGTGTGGGGTGGGGGCTaGTTCTGGGACGTAGGAAGA +
Preference number: 4 (lower is better)
Translates to: SICVPCSQHHLLGFTGSLVWGGG*FWDVGR
Trigger: TCTTCCTACGTCCCAGAAGCAGCCCCCACCCCACAC...GAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR GCA 90 bp CCTGCAGCCAACACCACCTCCTGGGCTTCACAGGTTCACTCACCCAAGAGGCCACTCACCAGGAAAAGATaGCGGAGGCTTGGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: PAANTTSWASQVHSPKRPLTRKR*RRLGSS
Trigger: AGAACTTCCAAGCCTCCGGCATCTTTTCCTGGTGAG...TGGCCTCTTGGGTGAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR GCA 90 bp TTCTCAGAAGGGGCTTTGTTCGCAGGCAGATGGAGCTGGGCCCACCGTGGCGAGACTTTCTCCAGTTGCTaGAGCATCTGTAGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: FSEGALFAGRWSWAHRGETFSSC*SICSLS
Trigger: ACTCAGGCTACAGATGCTGCAGCAACTGGAGAAAGT...CTCGCCACGGTGGGCCCAGCTCCATCTGCCTGCGAACAAAGCCCCTTCTGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR CCA 90 bp CAAAAGACCACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGACACGGTCCCCACGGTaGACTCCATGCCTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: QKTTTQYLCTLQPTPPPGTRSPR*TPCLFS
Trigger: GCTGAAGAGGCATGGAGTCCACCGTGGGGACCGTGT...CCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTGGTCTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp CCCCCATGCCCAGGGCACAGCTTTGTTGCTAAGCCTGTAACAAAAGACCACCACACACGGGCATGTAGATaGCAACACGGTCCCCACGGT +
Preference number: 4 (lower is better)
Translates to: PPCPGHSFVAKPVTKDHHTRACR*QHGPHG
Trigger: ACCGTGGGGACCGTGTTGCCATCTACATGCCCGTGT...GTGGTGGTCTTTTGTTACAGGCTTAGCAACAAAGCTGTGCCCTGGGCATGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp TCACAGGTTCACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGTACTCATGCTGCCACAGCCAATaGGGACACGGGCATGTAGAT +
Preference number: 4 (lower is better)
Translates to: SQVHSPKRPAQPRPSGYSCCHSQ*GHGHVD
Trigger: ATCTACATGCCCGTGTCCCCATTGGCTGTGGCAGCA...TGAGTACCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTGAACCTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp AGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACAGGTTCACTCACTGCCCATGCTCTCTaGGGCGCAAACAGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: SICVPCSQHHLLGFTGSLTAHAL*GANRVL
Trigger: GAGGACCCTGTTTGCGCCCCAGAGAGCATGGGCAGT...GAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp ACCACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACTATGGACGATGCCCTTaGGCATTCCGGTGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: TTTQYLCTLQPTPPPGLHYGRCP*AFRCSL
Trigger: CAGGGAGCACCGGAATGCCCAAGGGCATCGTCCATA...GTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp CCTGCAGCCAACACCACCTCCTGGGCTTCACAGGTTCACTCACCCAAGAGGCCAGCCAAAGATGTCACCTaGCTGGTGGTCAAACACAAG +
Preference number: 4 (lower is better)
Translates to: PAANTTSWASQVHSPKRPAKDVT*LVVKHK
Trigger: CTTGTGTTTGACCACCAGCCAGGTGACATCTTTGGC...TGGCCTCTTGGGTGAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp CTGGATCCAGACCTCCAAGTCTCATCATTGGACCTCAGTGGTTCTCACCGCCCCCAAAAAGGACGCTGGTaGCACCATTGCAGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: LDPDLQVSSLDLSGSHRPQKGRW*HHCREA
Trigger: GGCCTCTCTGCAATGGTGCCACCAGCGTCCTTTTTG...GGGGCGGTGAGAACCACTGAGGTCCAATGATGAGACTTGGAGGTCTGGATCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp TGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACAGGTTCACTCACCCAACAAAAAGGACGCTGGTaGCACCATTGCAGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: CVPCSQHHLLGFTGSLTQQKGRW*HHCREA
Trigger: GGCCTCTCTGCAATGGTGCCACCAGCGTCCTTTTTG...TTGGGTGAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp CTCCAAGTCTCATCATTGGACCTCAGTGGTTCTCACCGCCCCAACCACAGAGTGCAGCCGGACAGCCGTTaGGGCGCCATAGAACTGATT +
Preference number: 4 (lower is better)
Translates to: LQVSSLDLSGSHRPNHRVQPDSR*GAIELI
Trigger: AATCAGTTCTATGGCGCCCCAACGGCTGTCCGGCTG...CACTCTGTGGTTGGGGCGGTGAGAACCACTGAGGTCCAATGATGAGACTTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp CCCCCATGCCCAGGGCACAGCTTTGTTGCTAAGCCTGTAACAAAAGACCACCACCAGCCGGACAGCCGTTaGGGCGCCATAGAACTGATT +
Preference number: 4 (lower is better)
Translates to: PPCPGHSFVAKPVTKDHHQPDSR*GAIELI
Trigger: AATCAGTTCTATGGCGCCCCAACGGCTGTCCGGCTG...GTGGTGGTCTTTTGTTACAGGCTTAGCAACAAAGCTGTGCCCTGGGCATGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp CACAGAGTGAAGGTCAGGCAGCGTTTGCCAGGATTTGGCTCTGACCAAGTTAGTAGGGCCTCATCGCCATaGCAGGGAGGATTTCCGCCC +
Preference number: 4 (lower is better)
Translates to: HRVKVRQRLPGFGSDQVSRASSP*QGGFPP
Trigger: GGGCGGAAATCCTCCCTGCCATGGCGATGAGGCCCT...ACTAACTTGGTCAGAGCCAAATCCTGGCAAACGCTGCCTGACCTTCACTCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CCA 90 bp TGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACAGGTTCACTCACCCAAGTGTCTCCCAGCTCCTaGGCCTCACTAGTGATGATC +
Preference number: 4 (lower is better)
Translates to: CVPCSQHHLLGFTGSLTQVSPSS*ASLVMI
Trigger: GATCATCACTAGTGAGGCCCAGGAGCTGGGAGACAC...TTGGGTGAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CCA 90 bp ACCACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACGGGACCTCCAATGGATaGGAGAAAGGGCTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: TTTQYLCTLQPTPPPGLHGTSNG*EKGLSA
Trigger: GGCTGAGAGCCCTTTCTCCCATCCATTGGAGGTCCC...GTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CCA 90 bp CCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACAGGTGGGACCTCCAATGGATaGGAGAAAGGGCTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: PLSICVPCSQHHLLGFTGGTSNG*EKGLSA
Trigger: GGCTGAGAGCCCTTTCTCCCATCCATTGGAGGTCCC...ACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CCA 90 bp CCCAACCACAGAGTGAAGGTCAGGCAGCGTTTGCCAGGATTTGGCTCTGACCAACGCATAGCCTCTCCATaGGTGACACTCCTGGGACCT +
Preference number: 4 (lower is better)
Translates to: PNHRVKVRQRLPGFGSDQRIASP*VTLLGP
Trigger: AGGTCCCAGGAGTGTCACCCATGGAGAGGCTATGCG...TTGGTCAGAGCCAAATCCTGGCAAACGCTGCCTGACCTTCACTCTGTGGTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CCA 90 bp GTCTCATCATTGGACCTCAGTGGTTCTCACCGCCCCAACCACAGAGTGAAGGTCACAACCACGACCGAGTaGGTACTCAGTGGCCCAGAC +
Preference number: 4 (lower is better)
Translates to: VSSLDLSGSHRPNHRVKVTTTTE*VLSGPD
Trigger: GTCTGGGCCACTGAGTACCCACTCGGTCGTGGTTGT...GACCTTCACTCTGTGGTTGGGGCGGTGAGAACCACTGAGGTCCAATGATGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp CCAGGGCCATTTCAGTGTCATGGACCTGAAGCTGTCCTTAGCTTCCACAGGCTGGCAGCTGCAGCAGCTTaGGTCTTCAGAGCCAAGCAC +
Preference number: 4 (lower is better)
Translates to: PGPFQCHGPEAVLSFHRLAAAAA*VFRAKH
Trigger: GTGCTTGGCTCTGAAGACCCAAGCTGCTGCAGCTGC...CAGCCTGTGGAAGCTAAGGACAGCTTCAGGTCCATGACACTGAAATGGCCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR CCA 90 bp CTTTATTTGAACTCCCTCCCCTACAGATCATTCAGATGCCCGGGACCATGTCCATGGCCAGGCGGCACGTaGTCTCCAGTAGTTCCCGGC +
Preference number: 4 (lower is better)
Translates to: LYLNSLPYRSFRCPGPCPWPGGT*SPVVPG
Trigger: GCCGGGAACTACTGGAGACCACGTGCCGCCTGGCCA...TGGACATGGTCCCGGGCATCTGAATGATCTGTAGGGGAGGGAGTTCAAATAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537502.5
CDS-3UTR TCA 90 bp CCCCCATGCCCAGGGCACAGCTTTGTTGCTAAGCCTGTAACAAAAGACCACCACTTGTTGTCTGTCCTGTaGGCCACCAGGACATGCTGC +
Preference number: 4 (lower is better)
Translates to: PPCPGHSFVAKPVTKDHHLLSVL*ATRTCC
Trigger: GCAGCATGTCCTGGTGGCTCACAGGACAGACAACAA...GTGGTGGTCTTTTGTTACAGGCTTAGCAACAAAGCTGTGCCCTGGGCATGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR TCA 90 bp ACAGGTTCACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGTACTCAGTCTGAGGTGTACAGCATaGAGAGCATGTCCTCACTGC +
Preference number: 4 (lower is better)
Translates to: TGSLTQEASTTTTEWVLSLRCTA*RACPHC
Trigger: GCAGTGAGGACATGCTCTTCATGCTGTACACCTCAG...ACTGAGTACCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTGAACCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR TCA 90 bp CACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGTACTCAGTGGCCCAGCGCCATAGAACTGATTaGTCTTCAACCTCTCTACTG +
Preference number: 4 (lower is better)
Translates to: HSPKRPAQPRPSGYSVAQRHRTD*SSTSLL
Trigger: CAGTAGAGAGGTTGAAGATCAATCAGTTCTATGGCG...CTGGGCCACTGAGTACCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR TCA 90 bp ATGTCCAGGTTCCTCTCAGCAACATGGAAAGCTAAGCCATTTCACAAACGCACAGATGGGCTCTCCCACTaGCCCCAGGGTCCGCAGGGA +
Preference number: 4 (lower is better)
Translates to: MSRFLSATWKAKPFHKRTDGLSH*PQGPQG
Trigger: TCCCTGCGGACCCTGGGGTCAGTGGGAGAGCCCATC...TGTGCGTTTGTGAAATGGCTTAGCTTTCCATGTTGCTGAGAGGAACCTGGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR TCA 90 bp AAGACCACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCATCCATCCGCCCTGTaGTCTGGTAATAGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: KTTTQYLCTLQPTPPPGLHPSAL*SGNSRP
Trigger: AGGGCGGCTATTACCAGATCACAGGGCGGATGGATG...AAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTGGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR TCA 90 bp GAGAGACTGGATCCAGACCTCCAAGTCTCATCATTGGACCTCAGTGGTTCTCACGCCCCAACCACAGAGTaGAGGTCAGGCAGCGTTTGC +
Preference number: 4 (lower is better)
Translates to: ERLDPDLQVSSLDLSGSHAPTTE*RSGSVC
Trigger: GCAAACGCTGCCTGACCTTCACTCTGTGGTTGGGGC...GTGAGAACCACTGAGGTCCAATGATGAGACTTGGAGGTCTGGATCCAGTCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp CCAGGTTCCTCTCAGCAACATGGAAAGCTAAGCCATTTCACAAACGCACAACTGGCCTGGCTGTGCTGCTaGTGCTGCAACTGCGGGAGC +
Preference number: 4 (lower is better)
Translates to: PGSSQQHGKLSHFTNAQLAWLCC*CCNCGS
Trigger: GCTCCCGCAGTTGCAGCAGCAGCAGCACAGCCAGGC...CAGTTGTGCGTTTGTGAAATGGCTTAGCTTTCCATGTTGCTGAGAGGAACCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000432802.6
CDS-3UTR GCA 90 bp TCACAGGTTCACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGTACTCAGGGGACTTCCGAACATaGTGGTCCAAGCAGTTGACA +
Preference number: 4 (lower is better)
Translates to: SQVHSPKRPAQPRPSGYSGDFRT*WSKQLT
Trigger: TGTCAACTGCTTGGACCAGCATGTTCGGAAGTCCCC...TGAGTACCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTGAACCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000432802.6
CDS-3UTR GCA 90 bp AAGACCACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTACAGGCCAGCATTGCTaGCACAGCCAATGGGGACAC +
Preference number: 4 (lower is better)
Translates to: KTTTQYLCTLQPTPPPGLTGQHC*HSQWGH
Trigger: GTGTCCCCATTGGCTGTGGCAGCAATGCTGGCCTGT...AAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTGGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp AGACTGGATCCAGACCTCCAAGTCTCATCATTGGACCTCAGTGGTTCTCACCGCACAGGCCAGCATTGCTaGCACAGCCAATGGGGACAC +
Preference number: 4 (lower is better)
Translates to: RLDPDLQVSSLDLSGSHRTGQHC*HSQWGH
Trigger: GTGTCCCCATTGGCTGTGGCAGCAATGCTGGCCTGT...GCGGTGAGAACCACTGAGGTCCAATGATGAGACTTGGAGGTCTGGATCCAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp ACTGGATCCAGACCTCCAAGTCTCATCATTGGACCTCAGTGGTTCTCACCGCCCATAGAGCAGGTAGCCTaGCTGGGTATGGACGATGCC +
Preference number: 4 (lower is better)
Translates to: TGSRPPSLIIGPQWFSPPIEQVA*LGMDDA
Trigger: GGCATCGTCCATACCCAGGCAGGCTACCTGCTCTAT...GGGCGGTGAGAACCACTGAGGTCCAATGATGAGACTTGGAGGTCTGGATCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp CTTTATTTGAACTCCCTCCCCTACAGATCATTCAGATGCCCGGGACCATGTCCAAGGTGTCCACCAGCGTaGACCTGCTGTCCCCCACCA +
Preference number: 4 (lower is better)
Translates to: LYLNSLPYRSFRCPGPCPRCPPA*TCCPPP
Trigger: TGGTGGGGGACAGCAGGTGCACGCTGGTGGACACCT...TGGACATGGTCCCGGGCATCTGAATGATCTGTAGGGGAGGGAGTTCAAATAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp AGACTGGATCCAGACCTCCAAGTCTCATCATTGGACCTCAGTGGTTCTCACCGCCCACCTGTTTCTGTCTaGCACCAGGTGTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: RLDPDLQVSSLDLSGSHRPPVSV*HQVSTS
Trigger: GCTGGTGGACACCTGGTGGCAGACAGAAACAGGTGG...GCGGTGAGAACCACTGAGGTCCAATGATGAGACTTGGAGGTCTGGATCCAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp GCTTCAGAACTAAGGCGGCCACATTCACCCCACCGCTTAGGAGTTAGCTCCATTCCACCTGTTTCTGTCTaGCACCAGGTGTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: ASELRRPHSPHRLGVSSIPPVSV*HQVSTS
Trigger: GCTGGTGGACACCTGGTGGCAGACAGAAACAGGTGG...AATGGAGCTAACTCCTAAGCGGTGGGGTGAATGTGGCCGCCTTAGTTCTGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR GCA 90 bp CCAGGTTCCTCTCAGCAACATGGAAAGCTAAGCCATTTCACAAACGCACAACTGAGATGGTCCTGGCCATaGCCGGCCAGGCCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: PGSSQQHGKLSHFTNAQLRWSWP*PARPGR
Trigger: TCTCCCAGGCCTGGCCGGGCATGGCCAGGACCATCT...CAGTTGTGCGTTTGTGAAATGGCTTAGCTTTCCATGTTGCTGAGAGGAACCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp CCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACAGGTAGGTCAGGCAGCGTTTaGCAGGATTTGGCTCTGACC +
Preference number: 4 (lower is better)
Translates to: PLSICVPCSQHHLLGFTGRSGSV*QDLALT
Trigger: GGTCAGAGCCAAATCCTGGCAAACGCTGCCTGACCT...ACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp ATGCCCGGGACCATGTCCAGGTTCCTCTCAGCAACATGGAAAGCTAAGCCATTTTGGCCAGGCGGCACGTaGTCTCCAGTAGTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: MPGTMSRFLSATWKAKPFWPGGT*SPVVPC
Trigger: ACAGGGAACTACTGGAGACCACGTGCCGCCTGGCCA...AAATGGCTTAGCTTTCCATGTTGCTGAGAGGAACCTGGACATGGTCCCGGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000432802.6
CDS-3UTR CCA 90 bp ATGCCCGGGACCATGTCCAGGTTCCTCTCAGCAACATGGAAAGCTAAGCCATTTACTGCCCATGCTCTCTaGGGCGCAAACAGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: MPGTMSRFLSATWKAKPFTAHAL*GANRVL
Trigger: GAGGACCCTGTTTGCGCCCCAGAGAGCATGGGCAGT...AAATGGCTTAGCTTTCCATGTTGCTGAGAGGAACCTGGACATGGTCCCGGGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp CAGGTTCACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGTACTCAGTGGCCAAAGATGTCACCTaGCTGGTGGTCAAACACAAG +
Preference number: 4 (lower is better)
Translates to: QVHSPKRPAQPRPSGYSVAKDVT*LVVKHK
Trigger: CTTGTGTTTGACCACCAGCCAGGTGACATCTTTGGC...CACTGAGTACCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTGAACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp CAAAGAGAGACTGGATCCAGACCTCCAAGTCTCATCATTGGACCTCAGTGGTTCCAGGGTGGTCGGCGATaGCGTCCTCAATCTCTGCGG +
Preference number: 4 (lower is better)
Translates to: QRETGSRPPSLIIGPQWFQGGRR*RPQSLR
Trigger: CCGCAGAGATTGAGGACGCCATCGCCGACCACCCTG...GAACCACTGAGGTCCAATGATGAGACTTGGAGGTCTGGATCCAGTCTCTCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CCA 90 bp CACAGAGTGAAGGTCAGGCAGCGTTTGCCAGGATTTGGCTCTGACCAAGTTAGTGGTGGGGGCTGCTTCTaGGACGTAGGAAGACGCCAA +
Preference number: 4 (lower is better)
Translates to: HRVKVRQRLPGFGSDQVSGGGCF*DVGRRQ
Trigger: TTGGCGTCTTCCTACGTCCCAGAAGCAGCCCCCACC...ACTAACTTGGTCAGAGCCAAATCCTGGCAAACGCTGCCTGACCTTCACTCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CCA 90 bp TCAGGGGTACCTTCTGGGAAGGACAAGCCAGGGCTTGGGTGCCCGCCCATCCCAAAAACAAAGAGAGACTaGATCCAGACCTCCAAGTCT +
Preference number: 4 (lower is better)
Translates to: SGVPSGKDKPGLGCPPIPKTKRD*IQTSKS
Trigger: AGACTTGGAGGTCTGGATCCAGTCTCTCTTTGTTTT...TGGGATGGGCGGGCACCCAAGCCCTGGCTTGTCCTTCCCAGAAGGTACCCCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CCA 90 bp GCCATGTCGCATAGCCTCTCCATGGGTGACACTCCTGGGACCTCCAATGGATGGCTGAAGGGTAGACTGTaGGGCAAAGAGGACAAACTC +
Preference number: 4 (lower is better)
Translates to: AMSHSLSMGDTPGTSNGWLKGRL*GKEDKL
Trigger: GAGTTTGTCCTCTTTGCCCCACAGTCTACCCTTCAG...CCATCCATTGGAGGTCCCAGGAGTGTCACCCATGGAGAGGCTATGCGACATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CCA 90 bp ACATGGTTTATGTTTAACCACACGTCTCCACAGGGCTCCAGCCCCGCTCACAGAGCAGAAGAATGCTGCTaGCCTATGGGCCACACGGCA +
Preference number: 4 (lower is better)
Translates to: TWFMFNHTSPQGSSPAHRAEECC*PMGHTA
Trigger: TGCCGTGTGGCCCATAGGCCAGCAGCATTCTTCTGC...TCTGTGAGCGGGGCTGGAGCCCTGTGGAGACGTGTGGTTAAACATAAACCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR CCA 90 bp GCTGGGCCCACCGTGGCGAGGGGCAGCTGCAGCAGCTTGGGTCTTCAGAGCCAACTGAGAATTCTCACATaGTTTATGTTTAACCACACG +
Preference number: 4 (lower is better)
Translates to: AGPTVARGSCSSLGLQSQLRILT*FMFNHT
Trigger: CGTGTGGTTAAACATAAACCATGTGAGAATTCTCAG...TTGGCTCTGAAGACCCAAGCTGCTGCAGCTGCCCCTCGCCACGGTGGGCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376726.3
3UTR CAA 72 bp CACCGCCCCAACCACAGAGTGAAGGTCAGGCAGCGTTaGCCAGGATTTGGCTCTGACCAAGTTAGTGCTCTA +
Preference number: 4 (lower is better)
Translates to: HRPNHRVKVRQR*PGFGSDQVSAL
Trigger: TAGAGCACTAACTTGGTCAGAGCCAAATCCTGGCAAACGCTGCCTGACCTTCACTCTGTGGTTGGGGCGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR TCA 90 bp CCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACAGGTCTGAGGTGTACAGCATaGAGAGCATGTCCTCACTGC +
Preference number: 4 (lower is better)
Translates to: PLSICVPCSQHHLLGFTGLRCTA*RACPHC
Trigger: GCAGTGAGGACATGCTCTTCATGCTGTACACCTCAG...ACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR TCA 90 bp CCAGGTTCCTCTCAGCAACATGGAAAGCTAAGCCATTTCACAAACGCACAACTGCCCAGGCCTCACAGTTaGTGGGCTCTCCCACTGACC +
Preference number: 4 (lower is better)
Translates to: PGSSQQHGKLSHFTNAQLPRPHS*WALPLT
Trigger: GGTCAGTGGGAGAGCCCATCAACTGTGAGGCCTGGG...CAGTTGTGCGTTTGTGAAATGGCTTAGCTTTCCATGTTGCTGAGAGGAACCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR TCA 90 bp GAGAGACTGGATCCAGACCTCCAAGTCTCATCATTGGACCTCAGTGGTTCTCACTGCCCTTCTCATCCATaGGGACGGGGACGATGCCAA +
Preference number: 4 (lower is better)
Translates to: ERLDPDLQVSSLDLSGSHCPSHP*GRGRCQ
Trigger: TTGGCATCGTCCCCGTCCTCATGGATGAGAAGGGCA...GTGAGAACCACTGAGGTCCAATGATGAGACTTGGAGGTCTGGATCCAGTCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR TCA 90 bp AGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACAGGTTCACTCAGCCTGGGTAGGCCTTaGAGTAGGCGTCCACAAATC +
Preference number: 4 (lower is better)
Translates to: SICVPCSQHHLLGFTGSLSLGRP*SRRPQI
Trigger: GATTTGTGGACGCCTACTTCAAGGCCTACCCAGGCT...GAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR TCA 90 bp AAGACCACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTAGCCTGGGTAGGCCTTaGAGTAGGCGTCCACAAATC +
Preference number: 4 (lower is better)
Translates to: KTTTQYLCTLQPTPPPGLSLGRP*SRRPQI
Trigger: GATTTGTGGACGCCTACTTCAAGGCCTACCCAGGCT...AAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTGGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR TCA 90 bp CAAAAGACCACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGAGGCAGCTTCTCCTTTaGTGTCGTGGGGGTAGCCAA +
Preference number: 4 (lower is better)
Translates to: QKTTTQYLCTLQPTPPPGRQLLL*CRGGSQ
Trigger: TTGGCTACCCCCACGACATCAAAGGAGAAGCTGCCT...CCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTGGTCTTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR TCA 90 bp CCCAACCACAGAGTGAAGGTCAGGCAGCGTTTGCCAGGATTTGGCTCTGACCAACTGCACCACCACATCTaGGTCACCCGCACTATCTTT +
Preference number: 4 (lower is better)
Translates to: PNHRVKVRQRLPGFGSDQLHHHI*VTRTIF
Trigger: AAAGATAGTGCGGGTGACTCAGATGTGGTGGTGCAG...TTGGTCAGAGCCAAATCCTGGCAAACGCTGCCTGACCTTCACTCTGTGGTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR TCA 90 bp CCTGCAGCCAACACCACCTCCTGGGCTTCACAGGTTCACTCACCCAAGAGGCCATCCACACACTACATGTaGGTGTTGCATGCTGTTCTT +
Preference number: 4 (lower is better)
Translates to: PAANTTSWASQVHSPKRPSTHYM*VLHAVL
Trigger: AAGAACAGCATGCAACACTCACATGTAGTGTGTGGA...TGGCCTCTTGGGTGAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR TCA 90 bp CCATTTCAGTGTCATGGACCTGAAGCTGTCCTTAGCTTCCACAGGCTGGCTGTGACCAGGGACTGTAGGTaGTCCTCACTTCCGTTCCAG +
Preference number: 4 (lower is better)
Translates to: PFQCHGPEAVLSFHRLAVTRDCR*SSLPFQ
Trigger: CTGGAACGGAAGTGAGGATCACCTACAGTCCCTGGT...CACAGCCAGCCTGTGGAAGCTAAGGACAGCTTCAGGTCCATGACACTGAAATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR TCA 90 bp TCAAGTTCCTTCTCAGAAGGGGCTTTGTTCGCAGGCAGATGGAGCTGGGCCCACGGCTGGCTGTGGTCCTaGGAATTCTCACATGGTTTA +
Preference number: 4 (lower is better)
Translates to: SSSFSEGALFAGRWSWAHGWLWS*EFSHGL
Trigger: TAAACCATGTGAGAATTCTCAGGACCACAGCCAGCC...GTGGGCCCAGCTCCATCTGCCTGCGAACAAAGCCCCTTCTGAGAAGGAACTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR TCA 90 bp GTCTCATCATTGGACCTCAGTGGTTCTCACCGCCCCAACCACAGAGTGAAGGTCACACAGAACGAAGAATaGGGGGAAGCCAAGGCCCTT +
Preference number: 4 (lower is better)
Translates to: VSSLDLSGSHRPNHRVKVTQNEE*GEAKAL
Trigger: AAGGGCCTTGGCTTCCCCTCATTCTTCGTTCTGTGT...GACCTTCACTCTGTGGTTGGGGCGGTGAGAACCACTGAGGTCCAATGATGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537502.5
CDS-3UTR GCA 90 bp ATAAAGCTTTATTTGAACTCCCTCCCCTACAGATCATTCAGATGCCCGGGACCACTCCCGGGCTGCCTGTaGACTCAGCGCGGGATACGA +
Preference number: 4 (lower is better)
Translates to: IKLYLNSLPYRSFRCPGPLPGCL*TQRGIR
Trigger: TCGTATCCCGCGCTGAGTGCACAGGCAGCCCGGGAG...TGGTCCCGGGCATCTGAATGATCTGTAGGGGAGGGAGTTCAAATAAAGCTTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000432802.6
CDS-3UTR GCA 90 bp CAAAGAGAGACTGGATCCAGACCTCCAAGTCTCATCATTGGACCTCAGTGGTTCCCTGGGTATGGACGATaGCCTTGGGCATTCCGGTGC +
Preference number: 4 (lower is better)
Translates to: QRETGSRPPSLIIGPQWFPGYGR*PWAFRC
Trigger: GCACCGGAATGCCCAAGGGCATCGTCCATACCCAGG...GAACCACTGAGGTCCAATGATGAGACTTGGAGGTCTGGATCCAGTCTCTCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp ATGTCCAGGTTCCTCTCAGCAACATGGAAAGCTAAGCCATTTCACAAACGCACAAGATGGTCCTGGCCATaGCCGGCCAGGCCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: MSRFLSATWKAKPFHKRTRWSWP*PARPGR
Trigger: TCTCCCAGGCCTGGCCGGGCATGGCCAGGACCATCT...TGTGCGTTTGTGAAATGGCTTAGCTTTCCATGTTGCTGAGAGGAACCTGGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp CTCCAAGTCTCATCATTGGACCTCAGTGGTTCTCACCGCCCCAACCACAGAGTGCACTTAGCAGCAGCCTaGTTGTCCTTGCACTTCTGG +
Preference number: 4 (lower is better)
Translates to: LQVSSLDLSGSHRPNHRVHLAAA*LSLHFW
Trigger: CCAGAAGTGCAAGGACAAGCAGGCTGCTGCTAAGTG...CACTCTGTGGTTGGGGCGGTGAGAACCACTGAGGTCCAATGATGAGACTTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR GCA 90 bp CACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGTACTCAGTGGCCCAGCTATTTGGAGTATGTTaGCTCTCCTATCAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: HSPKRPAQPRPSGYSVAQLFGVC*LSYQEA
Trigger: TGCCTCTTGATAGGAGAGGCAACATACTCCAAATAG...CTGGGCCACTGAGTACCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR GCA 90 bp CCCCCATGCCCAGGGCACAGCTTTGTTGCTAAGCCTGTAACAAAAGACCACCACCGCTCGCAGCGTGTTTaGATAGCTCTCCTCTGTTCA +
Preference number: 4 (lower is better)
Translates to: PPCPGHSFVAKPVTKDHHRSQRV*IALLCS
Trigger: TGAACAGAGGAGAGCTATGCAAACACGCTGCGAGCG...GTGGTGGTCTTTTGTTACAGGCTTAGCAACAAAGCTGTGCCCTGGGCATGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537502.5
CDS-3UTR CCA 90 bp CCAGGTTCCTCTCAGCAACATGGAAAGCTAAGCCATTTCACAAACGCACAACTGGCCTCTTCAGCGTGTTaGCCAGGCGGCACGTGGTCT +
Preference number: 4 (lower is better)
Translates to: PGSSQQHGKLSHFTNAQLASSAC*PGGTWS
Trigger: AGACCACGTGCCGCCTGGCCAACACGCTGAAGAGGC...CAGTTGTGCGTTTGTGAAATGGCTTAGCTTTCCATGTTGCTGAGAGGAACCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp GTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACAGGTTCACTCATGCTGCCACAGCCAATaGGGACACGGGCATGTAGAT +
Preference number: 4 (lower is better)
Translates to: VFVYPAANTTSWASQVHSCCHSQ*GHGHVD
Trigger: ATCTACATGCCCGTGTCCCCATTGGCTGTGGCAGCA...TGAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp CCCAACCACAGAGTGAAGGTCAGGCAGCGTTTGCCAGGATTTGGCTCTGACCAAGCAAAGATGACTGTGTaGACAGCTCCGATCCTGGCA +
Preference number: 4 (lower is better)
Translates to: PNHRVKVRQRLPGFGSDQAKMTV*TAPILA
Trigger: TGCCAGGATCGGAGCTGTCCACACAGTCATCTTTGC...TTGGTCAGAGCCAAATCCTGGCAAACGCTGCCTGACCTTCACTCTGTGGTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp GTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACAGGTTCACTCACCACCCCGGAGTCCTTaGTTGAAGGTGATAACCACC +
Preference number: 4 (lower is better)
Translates to: VFVYPAANTTSWASQVHSPPRSP*LKVITT
Trigger: GGTGGTTATCACCTTCAACCAAGGACTCCGGGGTGG...TGAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp GTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACAGGTTCACTCACCCAAGAAGATGTCACCTGGCTaGTGGTCAAACACAAGCTTG +
Preference number: 4 (lower is better)
Translates to: VYPAANTTSWASQVHSPKKMSPG*WSNTSL
Trigger: CAAGCTTGTGTTTGACCACCAGCCAGGTGACATCTT...CTTGGGTGAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp ACAGGTTCACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGTACTCAGTTCTCAAAAAGGACGCTaGTGGCACCATTGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: TGSLTQEASTTTTEWVLSSQKGR*WHHCRE
Trigger: CTCTCTGCAATGGTGCCACCAGCGTCCTTTTTGAGA...ACTGAGTACCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTGAACCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp TGGTTCTCACCGCCCCAACCACAGAGTGAAGGTCAGGCAGCGTTTGCCAGGATTTCTCAAAAAGGACGCTaGTGGCACCATTGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: WFSPPQPQSEGQAAFARISQKGR*WHHCRE
Trigger: CTCTCTGCAATGGTGCCACCAGCGTCCTTTTTGAGA...AATCCTGGCAAACGCTGCCTGACCTTCACTCTGTGGTTGGGGCGGTGAGAACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp TGGGCTTCACAGGTTCACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGAGCATTGGGATAAACTaGGGTGCTCTCAAAAAGGAC +
Preference number: 4 (lower is better)
Translates to: WASQVHSPKRPAQPRPSGSIGIN*GALKKD
Trigger: GTCCTTTTTGAGAGCACCCCAGTTTATCCCAATGCT...CCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTGAACCTGTGAAGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp GAGAGACTGGATCCAGACCTCCAAGTCTCATCATTGGACCTCAGTGGTTCTCACCAGCCGGACAGCCGTTaGGGCGCCATAGAACTGATT +
Preference number: 4 (lower is better)
Translates to: ERLDPDLQVSSLDLSGSHQPDSR*GAIELI
Trigger: AATCAGTTCTATGGCGCCCCAACGGCTGTCCGGCTG...GTGAGAACCACTGAGGTCCAATGATGAGACTTGGAGGTCTGGATCCAGTCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp CACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACAGAATGACAGCACTTTCTaGTACTGCAGGGTGGTCGGC +
Preference number: 4 (lower is better)
Translates to: HHSVFVYPAANTTSWASQNDSTF*YCRVVG
Trigger: GCCGACCACCCTGCAGTACCAGAAAGTGCTGTCATT...CTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CCA 90 bp AGACCACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCCAGGCACAGCATATTTaGCGATCTTGGTGGCCACCA +
Preference number: 4 (lower is better)
Translates to: RPPLSICVPCSQHHLLGFQAQHI*RSWWPP
Trigger: TGGTGGCCACCAAGATCGCCAAATATGCTGTGCCTG...GAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTGGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CCA 90 bp CTCCTATCAAGAGGCATCTGGGGGCACAAAAATCTTTCTGGATCACAGCTTGAAGGACAAGCCAGGGCTTaGGTGCCCGCCCATCCCAAG +
Preference number: 4 (lower is better)
Translates to: LLSRGIWGHKNLSGSQLEGQARA*VPAHPK
Trigger: CTTGGGATGGGCGGGCACCCAAGCCCTGGCTTGTCC...TTCAAGCTGTGATCCAGAAAGATTTTTGTGCCCCCAGATGCCTCTTGATAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CCA 90 bp GTAGCTTCAGAACTAAGGCGGCCACATTCACCCCACCGCTTAGGAGTTAGCTCCATCATTGGACCTCAGTaGTTCTCACCGCCCCAACCA +
Preference number: 4 (lower is better)
Translates to: VASELRRPHSPHRLGVSSIIGPQ*FSPPQP
Trigger: TGGTTGGGGCGGTGAGAACCACTGAGGTCCAATGAT...GGAGCTAACTCCTAAGCGGTGGGGTGAATGTGGCCGCCTTAGTTCTGAAGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CCA 90 bp CACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGTACTCAGTGGCCCAGAAAACAAAGAGAGACTaGATCCAGACCTCCAAGTCT +
Preference number: 4 (lower is better)
Translates to: HSPKRPAQPRPSGYSVAQKTKRD*IQTSKS
Trigger: AGACTTGGAGGTCTGGATCCAGTCTCTCTTTGTTTT...CTGGGCCACTGAGTACCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp CACAGAGTGAAGGTCAGGCAGCGTTTGCCAGGATTTGGCTCTGACCAAGTTAGTACAACCACGACCGAGTaGGTACTCAGTGGCCCAGAC +
Preference number: 4 (lower is better)
Translates to: HRVKVRQRLPGFGSDQVSTTTTE*VLSGPD
Trigger: GTCTGGGCCACTGAGTACCCACTCGGTCGTGGTTGT...ACTAACTTGGTCAGAGCCAAATCCTGGCAAACGCTGCCTGACCTTCACTCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CCA 90 bp ATGCCCGGGACCATGTCCAGGTTCCTCTCAGCAACATGGAAAGCTAAGCCATTTACAACCACGACCGAGTaGGTACTCAGTGGCCCAGAC +
Preference number: 4 (lower is better)
Translates to: MPGTMSRFLSATWKAKPFTTTTE*VLSGPD
Trigger: GTCTGGGCCACTGAGTACCCACTCGGTCGTGGTTGT...AAATGGCTTAGCTTTCCATGTTGCTGAGAGGAACCTGGACATGGTCCCGGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR TCA 90 bp CACAGAGTGAAGGTCAGGCAGCGTTTGCCAGGATTTGGCTCTGACCAAGTTAGTCGTGGGGGTAGCCAATaGCAGCACTTTCTGGTACTG +
Preference number: 4 (lower is better)
Translates to: HRVKVRQRLPGFGSDQVSRGGSQ*QHFLVL
Trigger: CAGTACCAGAAAGTGCTGTCATTGGCTACCCCCACG...ACTAACTTGGTCAGAGCCAAATCCTGGCAAACGCTGCCTGACCTTCACTCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR TCA 90 bp ACCATGTCCAGGTTCCTCTCAGCAACATGGAAAGCTAAGCCATTTCACAAACGCACTGCCACAAGGCCCTaGAGGGTAGACTGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: TMSRFLSATWKAKPFHKRTATRP*RVDCGA
Trigger: TGCCCCACAGTCTACCCTTCAGGGCCTTGTGGCAGT...GCGTTTGTGAAATGGCTTAGCTTTCCATGTTGCTGAGAGGAACCTGGACATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR TCA 90 bp CCATTTCAGTGTCATGGACCTGAAGCTGTCCTTAGCTTCCACAGGCTGGCTGTGGGTGATATGGGGCGATaGGGACTTTCTCCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: PFQCHGPEAVLSFHRLAVGDMGR*GLSPVA
Trigger: AGCAACTGGAGAAAGTCCTCATCGCCCCATATCACC...CACAGCCAGCCTGTGGAAGCTAAGGACAGCTTCAGGTCCATGACACTGAAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR GCA 90 bp TCAAGAGGCATCTGGGGGCACAAAAATCTTTCTGGATCACAGCTTGAAGAAACAGCCTGGCTGTGCTGCTaGTGCTGCAACTGCGGGAGC +
Preference number: 4 (lower is better)
Translates to: SRGIWGHKNLSGSQLEETAWLCC*CCNCGS
Trigger: GCTCCCGCAGTTGCAGCAGCAGCAGCACAGCCAGGC...TGTTTCTTCAAGCTGTGATCCAGAAAGATTTTTGTGCCCCCAGATGCCTCTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000323482.9
CDS-3UTR GCA 90 bp AAGACCACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTGGGGACTTCCGAACATaGTGGTCCAAGCAGTTGACA +
Preference number: 4 (lower is better)
Translates to: KTTTQYLCTLQPTPPPGLGDFRT*WSKQLT
Trigger: TGTCAACTGCTTGGACCAGCATGTTCGGAAGTCCCC...AAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTGGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000432802.6
CDS-3UTR GCA 90 bp CCAGGTTCCTCTCAGCAACATGGAAAGCTAAGCCATTTCACAAACGCACAACTGCCACGGTGGACTCCATaGCTCTTCAGCGTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: PGSSQQHGKLSHFTNAQLPRWTP*LFSVLA
Trigger: GGCCAACACGCTGAAGAGGCATGGAGTCCACCGTGG...CAGTTGTGCGTTTGTGAAATGGCTTAGCTTTCCATGTTGCTGAGAGGAACCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp ACCATGTCCAGGTTCCTCTCAGCAACATGGAAAGCTAAGCCATTTCACAAACGCGGCACAGGCCAGCATTaGTGCCACAGCCAATGGGGA +
Preference number: 4 (lower is better)
Translates to: TMSRFLSATWKAKPFHKRGTGQH*CHSQWG
Trigger: TCCCCATTGGCTGTGGCAGCAATGCTGGCCTGTGCC...GCGTTTGTGAAATGGCTTAGCTTTCCATGTTGCTGAGAGGAACCTGGACATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp CAAAAGACCACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCCCAGCCAAGGACTCTaGACTGAAGCCAGCAAAGAT +
Preference number: 4 (lower is better)
Translates to: QKTTTQYLCTLQPTPPPGPSQGL*TEASKD
Trigger: ATCTTTGCTGGCTTCAGTGCAGAGTCCTTGGCTGGG...CCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTGGTCTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp AAGACCACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCCCAGCCAAGGACTCTaGACTGAAGCCAGCAAAGAT +
Preference number: 4 (lower is better)
Translates to: KTTTQYLCTLQPTPPPGLPSQGL*TEASKD
Trigger: ATCTTTGCTGGCTTCAGTGCAGAGTCCTTGGCTGGG...AAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTGGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp CTCCTATCAAGAGGCATCTGGGGGCACAAAAATCTTTCTGGATCACAGCTTGAAAGGTGTCCACCAGCGTaGACCTGCTGTCCCCCACCA +
Preference number: 4 (lower is better)
Translates to: LLSRGIWGHKNLSGSQLERCPPA*TCCPPP
Trigger: TGGTGGGGGACAGCAGGTGCACGCTGGTGGACACCT...TTCAAGCTGTGATCCAGAAAGATTTTTGTGCCCCCAGATGCCTCTTGATAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR GCA 90 bp CTGCAGCCAACACCACCTCCTGGGCTTCACAGGTTCACTCACCCAAGAGGCCAGGAATGGAGATGGCAATaGCTTTTCATTCCAGGAAAC +
Preference number: 4 (lower is better)
Translates to: LQPTPPPGLHRFTHPRGQEWRWQ*LFIPGN
Trigger: GTTTCCTGGAATGAAAAGGCATTGCCATCTCCATTC...CTGGCCTCTTGGGTGAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR GCA 90 bp TGGGCTTCACAGGTTCACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGGAATGGAGATGGCAATaGCTTTTCATTCCAGGAAAC +
Preference number: 4 (lower is better)
Translates to: WASQVHSPKRPAQPRPSGEWRWQ*LFIPGN
Trigger: GTTTCCTGGAATGAAAAGGCATTGCCATCTCCATTC...CCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTGAACCTGTGAAGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR GCA 90 bp AATAAAGCTTTATTTGAACTCCCTCCCCTACAGATCATTCAGATGCCCGGGACCCCAACCGCCAGCCCCTaGATGCCTAGCAGGGAGGTA +
Preference number: 4 (lower is better)
Translates to: NKALFELPPLQIIQMPGTPTASP*MPSREV
Trigger: TACCTCCCTGCTAGGCATGCAGGGGCTGGCGGTTGG...GGTCCCGGGCATCTGAATGATCTGTAGGGGAGGGAGTTCAAATAAAGCTTTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp GTCTCATCATTGGACCTCAGTGGTTCTCACCGCCCCAACCACAGAGTGAAGGTCAGTATTTGTGTACCCTaGAGCCAACACCACCTCCTG +
Preference number: 4 (lower is better)
Translates to: VSSLDLSGSHRPNHRVKVSICVP*SQHHLL
Trigger: CAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACT...GACCTTCACTCTGTGGTTGGGGCGGTGAGAACCACTGAGGTCCAATGATGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp CCATGTCCAGGTTCCTCTCAGCAACATGGAAAGCTAAGCCATTTCACAAACGCAGGACAGCTCCGATCCTaGCACAGGCCAGCATTGCTG +
Preference number: 4 (lower is better)
Translates to: PCPGSSQQHGKLSHFTNAGQLRS*HRPALL
Trigger: CAGCAATGCTGGCCTGTGCCAGGATCGGAGCTGTCC...TGCGTTTGTGAAATGGCTTAGCTTTCCATGTTGCTGAGAGGAACCTGGACATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp GTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACAGGTTCACTCAGCAAAGATGACTGTGTaGACAGCTCCGATCCTGGCA +
Preference number: 4 (lower is better)
Translates to: VFVYPAANTTSWASQVHSAKMTV*TAPILA
Trigger: TGCCAGGATCGGAGCTGTCCACACAGTCATCTTTGC...TGAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp AGACTGGATCCAGACCTCCAAGTCTCATCATTGGACCTCAGTGGTTCTCACCGCTCCAGATCCCCCATGTaGACCTTGTTGTCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: RLDPDLQVSSLDLSGSHRSRSPM*TLLSVL
Trigger: CAGGACAGACAACAAGGTCCACATGGGGGATCTGGA...GCGGTGAGAACCACTGAGGTCCAATGATGAGACTTGGAGGTCTGGATCCAGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp CTCCAAGTCTCATCATTGGACCTCAGTGGTTCTCACCGCCCCAACCACAGAGTGAGTACCGACCAGCATTaGGATAAACTGGGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: LQVSSLDLSGSHRPNHRVSTDQH*DKLGCS
Trigger: AGAGCACCCCAGTTTATCCCAATGCTGGTCGGTACT...CACTCTGTGGTTGGGGCGGTGAGAACCACTGAGGTCCAATGATGAGACTTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp AGACCACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCAGTACCGACCAGCATTaGGATAAACTGGGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: RPPLSICVPCSQHHLLGFSTDQH*DKLGCS
Trigger: AGAGCACCCCAGTTTATCCCAATGCTGGTCGGTACT...GAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp ATAAAGCTTTATTTGAACTCCCTCCCCTACAGATCATTCAGATGCCCGGGACCAAGGGCCTCATCGCCATaGCAGGGAGGATTTCCGCCC +
Preference number: 4 (lower is better)
Translates to: IKLYLNSLPYRSFRCPGPRASSP*QGGFPP
Trigger: GGGCGGAAATCCTCCCTGCCATGGCGATGAGGCCCT...TGGTCCCGGGCATCTGAATGATCTGTAGGGGAGGGAGTTCAAATAAAGCTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp CCAGGTTCCTCTCAGCAACATGGAAAGCTAAGCCATTTCACAAACGCACAACTGTCTGGTACTGCAGGGTaGTCGGCGATGGCGTCCTCA +
Preference number: 4 (lower is better)
Translates to: PGSSQQHGKLSHFTNAQLSGTAG*SAMASS
Trigger: TGAGGACGCCATCGCCGACCACCCTGCAGTACCAGA...CAGTTGTGCGTTTGTGAAATGGCTTAGCTTTCCATGTTGCTGAGAGGAACCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CCA 90 bp AACAAAGAGAGACTGGATCCAGACCTCCAAGTCTCATCATTGGACCTCAGTGGTGGTGGGGGCTGCTTCTaGGACGTAGGAAGACGCCAA +
Preference number: 4 (lower is better)
Translates to: NKERLDPDLQVSSLDLSGGGGCF*DVGRRQ
Trigger: TTGGCGTCTTCCTACGTCCCAGAAGCAGCCCCCACC...ACCACTGAGGTCCAATGATGAGACTTGGAGGTCTGGATCCAGTCTCTCTTTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CCA 90 bp CAGGTTCACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGTACTCAGTGGCAGAGGAATGGAGATaGCAATGCCTTTTCATTCCA +
Preference number: 4 (lower is better)
Translates to: QVHSPKRPAQPRPSGYSVAEEWR*QCLFIP
Trigger: TGGAATGAAAAGGCATTGCCATCTCCATTCCTCTGC...CACTGAGTACCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTGAACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CCA 90 bp GAGAGACTGGATCCAGACCTCCAAGTCTCATCATTGGACCTCAGTGGTTCTCACCTCACCTTCCTGTGCTaGCTCAAGAGGGCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: ERLDPDLQVSSLDLSGSHLTFLC*LKRAEE
Trigger: TTCCTCTGCCCTCTTGAGCCAGCACAGGAAGGTGAG...GTGAGAACCACTGAGGTCCAATGATGAGACTTGGAGGTCTGGATCCAGTCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CCA 90 bp CCTGCAGCCAACACCACCTCCTGGGCTTCACAGGTTCACTCACCCAAGAGGCCAGTATCTAGACAGATCTaGAGAAAACACGGTTGCTAC +
Preference number: 4 (lower is better)
Translates to: PAANTTSWASQVHSPKRPVSRQI*RKHGCY
Trigger: GTAGCAACCGTGTTTTCTCCAGATCTGTCTAGATAC...TGGCCTCTTGGGTGAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CCA 90 bp CTGGATCCAGACCTCCAAGTCTCATCATTGGACCTCAGTGGTTCTCACCGCCCCTCCAAGTCTCATCATTaGACCTCAGTGGTTCTCACC +
Preference number: 4 (lower is better)
Translates to: LDPDLQVSSLDLSGSHRPSKSHH*TSVVLT
Trigger: GGTGAGAACCACTGAGGTCCAATGATGAGACTTGGA...GGGGCGGTGAGAACCACTGAGGTCCAATGATGAGACTTGGAGGTCTGGATCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp TGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACAGGTTCACTCACCCAATCCAAGTCTCATCATTaGACCTCAGTGGTTCTCACC +
Preference number: 4 (lower is better)
Translates to: CVPCSQHHLLGFTGSLTQSKSHH*TSVVLT
Trigger: GGTGAGAACCACTGAGGTCCAATGATGAGACTTGGA...TTGGGTGAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp TCACAGGTTCACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGTACTCAGAGGTAAGCACCCACTaGCGTCGTGATTTCCATTAT +
Preference number: 4 (lower is better)
Translates to: SQVHSPKRPAQPRPSGYSEVSTH*RRDFHY
Trigger: ATAATGGAAATCACGACGCCAGTGGGTGCTTACCTC...TGAGTACCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTGAACCTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp GAGAGACTGGATCCAGACCTCCAAGTCTCATCATTGGACCTCAGTGGTTCTCACGCCAACACCACCTCCTaGGCTTCACAGGTTCACTCA +
Preference number: 4 (lower is better)
Translates to: ERLDPDLQVSSLDLSGSHANTTS*ASQVHS
Trigger: TGAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGC...GTGAGAACCACTGAGGTCCAATGATGAGACTTGGAGGTCTGGATCCAGTCTCTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
3UTR CAA 72 bp AAAGAGAGACTGGATCCAGACCTCCAAGTCTCATCATaGGACCTCAGTGGTTCTCACCGCCCCAACCACAGA +
Preference number: 4 (lower is better)
Translates to: KERLDPDLQVSS*DLSGSHRPNHR
Trigger: TCTGTGGTTGGGGCGGTGAGAACCACTGAGGTCCAATGATGAGACTTGGAGGTCTGGATCCAGTCTCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR TCA 90 bp AAGACCACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTGCTGGTCCAAGCAGTTaGCAGAGACATTTAACTGGC +
Preference number: 4 (lower is better)
Translates to: KTTTQYLCTLQPTPPPGLAGPSS*QRHLTG
Trigger: GCCAGTTAAATGTCTCTGTCAACTGCTTGGACCAGC...AAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTGGTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000432802.6
CDS-3UTR TCA 90 bp CCATTTCAGTGTCATGGACCTGAAGCTGTCCTTAGCTTCCACAGGCTGGCTGTGGCTGGTCCAAGCAGTTaGCAGAGACATTTAACTGGC +
Preference number: 4 (lower is better)
Translates to: PFQCHGPEAVLSFHRLAVAGPSS*QRHLTG
Trigger: GCCAGTTAAATGTCTCTGTCAACTGCTTGGACCAGC...CACAGCCAGCCTGTGGAAGCTAAGGACAGCTTCAGGTCCATGACACTGAAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR TCA 90 bp CACAGAGTGAAGGTCAGGCAGCGTTTGCCAGGATTTGGCTCTGACCAAGTTAGTCTGAGGTGTACAGCATaGAGAGCATGTCCTCACTGC +
Preference number: 4 (lower is better)
Translates to: HRVKVRQRLPGFGSDQVSLRCTA*RACPHC
Trigger: GCAGTGAGGACATGCTCTTCATGCTGTACACCTCAG...ACTAACTTGGTCAGAGCCAAATCCTGGCAAACGCTGCCTGACCTTCACTCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR TCA 90 bp TGGTTCTCACCGCCCCAACCACAGAGTGAAGGTCAGGCAGCGTTTGCCAGGATTCGCCATAGAACTGATTaGTCTTCAACCTCTCTACTG +
Preference number: 4 (lower is better)
Translates to: WFSPPQPQSEGQAAFARIRHRTD*SSTSLL
Trigger: CAGTAGAGAGGTTGAAGATCAATCAGTTCTATGGCG...AATCCTGGCAAACGCTGCCTGACCTTCACTCTGTGGTTGGGGCGGTGAGAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR TCA 90 bp TCAAGAGGCATCTGGGGGCACAAAAATCTTTCTGGATCACAGCTTGAAGAAACACCCAGGCCTCACAGTTaGTGGGCTCTCCCACTGACC +
Preference number: 4 (lower is better)
Translates to: SRGIWGHKNLSGSQLEETPRPHS*WALPLT
Trigger: GGTCAGTGGGAGAGCCCATCAACTGTGAGGCCTGGG...TGTTTCTTCAAGCTGTGATCCAGAAAGATTTTTGTGCCCCCAGATGCCTCTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR TCA 90 bp AAGAACCCAACTATTTGGAGTATGTTGCCTCTCCTATCAAGAGGCATCTGGGGGTGCCCTTCTCATCCATaGGGACGGGGACGATGCCAA +
Preference number: 4 (lower is better)
Translates to: KNPTIWSMLPLLSRGIWGCPSHP*GRGRCQ
Trigger: TTGGCATCGTCCCCGTCCTCATGGATGAGAAGGGCA...CCCCCAGATGCCTCTTGATAGGAGAGGCAACATACTCCAAATAGTTGGGTTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR TCA 90 bp ACAGGTTCACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGTACTCAGTTATCTTTCACCACAATaGAGGCAAAGGCAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: TGSLTQEASTTTTEWVLSYLSPQ*RQRQLL
Trigger: GAGAAGCTGCCTTTGCCTTCATTGTGGTGAAAGATA...ACTGAGTACCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTGAACCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR GCA 90 bp ATGCCCGGGACCATGTCCAGGTTCCTCTCAGCAACATGGAAAGCTAAGCCATTTCCCAGCCAAGGACTCTaGACTGAAGCCAGCAAAGAT +
Preference number: 4 (lower is better)
Translates to: MPGTMSRFLSATWKAKPFPSQGL*TEASKD
Trigger: ATCTTTGCTGGCTTCAGTGCAGAGTCCTTGGCTGGG...AAATGGCTTAGCTTTCCATGTTGCTGAGAGGAACCTGGACATGGTCCCGGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp AATAAAGCTTTATTTGAACTCCCTCCCCTACAGATCATTCAGATGCCCGGGACCCCTGGGTATGGACGATaGCCTTGGGCATTCCGGTGC +
Preference number: 4 (lower is better)
Translates to: NKALFELPPLQIIQMPGTPGYGR*PWAFRC
Trigger: GCACCGGAATGCCCAAGGGCATCGTCCATACCCAGG...GGTCCCGGGCATCTGAATGATCTGTAGGGGAGGGAGTTCAAATAAAGCTTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp ACTGGCGTCGTGATTTCCATTATCTTGCTAATGTTGACAGCACCTAAGTCACATCCACCAGCGTGCACCTaGTGTCCCCCACCACCCTGT +
Preference number: 4 (lower is better)
Translates to: TGVVISIILLMLTAPKSHPPACT*CPPPPC
Trigger: ACAGGGTGGTGGGGGACAGCAGGTGCACGCTGGTGG...ATGTGACTTAGGTGCTGTCAACATTAGCAAGATAATGGAAATCACGACGCCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp ACCATGTCCAGGTTCCTCTCAGCAACATGGAAAGCTAAGCCATTTCACAAACGCCCACCTGTTTCTGTCTaGCACCAGGTGTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: TMSRFLSATWKAKPFHKRPPVSV*HQVSTS
Trigger: GCTGGTGGACACCTGGTGGCAGACAGAAACAGGTGG...GCGTTTGTGAAATGGCTTAGCTTTCCATGTTGCTGAGAGGAACCTGGACATGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp CTTTATTTGAACTCCCTCCCCTACAGATCATTCAGATGCCCGGGACCATGTCCAGTGGTGCGATGCAGATaGCACCTGTTTCTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: LYLNSLPYRSFRCPGPCPVVRCR*HLFLSA
Trigger: GGCAGACAGAAACAGGTGGCATCTGCATCGCACCAC...TGGACATGGTCCCGGGCATCTGAATGATCTGTAGGGGAGGGAGTTCAAATAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp TTGGAGTATGTTGCCTCTCCTATCAAGAGGCATCTGGGGGCACAAAAATCTTTCGTGTGGGGTGGGGGCTaGTTCTGGGACGTAGGAAGA +
Preference number: 4 (lower is better)
Translates to: LEYVASPIKRHLGAQKSFVWGGG*FWDVGR
Trigger: TCTTCCTACGTCCCAGAAGCAGCCCCCACCCCACAC...GAAAGATTTTTGTGCCCCCAGATGCCTCTTGATAGGAGAGGCAACATACTCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR GCA 90 bp TTGGAGTATGTTGCCTCTCCTATCAAGAGGCATCTGGGGGCACAAAAATCTTTCCCCGAACACTGGCACTaGCACAAGGCCCTGAAGGGT +
Preference number: 4 (lower is better)
Translates to: LEYVASPIKRHLGAQKSFPEHWH*HKALKG
Trigger: ACCCTTCAGGGCCTTGTGGCAGTGCCAGTGTTCGGG...GAAAGATTTTTGTGCCCCCAGATGCCTCTTGATAGGAGAGGCAACATACTCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR GCA 90 bp AATAAAGCTTTATTTGAACTCCCTCCCCTACAGATCATTCAGATGCCCGGGACCCCCGAACACTGGCACTaGCACAAGGCCCTGAAGGGT +
Preference number: 4 (lower is better)
Translates to: NKALFELPPLQIIQMPGTPEHWH*HKALKG
Trigger: ACCCTTCAGGGCCTTGTGGCAGTGCCAGTGTTCGGG...GGTCCCGGGCATCTGAATGATCTGTAGGGGAGGGAGTTCAAATAAAGCTTTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp CAAAAGACCACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGAGTATTTGTGTACCCTaGAGCCAACACCACCTCCTG +
Preference number: 4 (lower is better)
Translates to: QKTTTQYLCTLQPTPPPGSICVP*SQHHLL
Trigger: CAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACT...CCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTGGTCTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp AGACTGGATCCAGACCTCCAAGTCTCATCATTGGACCTCAGTGGTTCTCACCGCTACAGATCATTCAGATaGCCGGGACCATGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: RLDPDLQVSSLDLSGSHRYRSFR*PGPCPG
Trigger: ACCTGGACATGGTCCCGGGCATCTGAATGATCTGTA...GCGGTGAGAACCACTGAGGTCCAATGATGAGACTTGGAGGTCTGGATCCAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp ACATGGTTTATGTTTAACCACACGTCTCCACAGGGCTCCAGCCCCGCTCACAGAGTTTTGGTTTCAGTTTaGACGCTCTCCTGCAAGCCC +
Preference number: 4 (lower is better)
Translates to: TWFMFNHTSPQGSSPAHRVLVSV*TLSCKP
Trigger: GGGCTTGCAGGAGAGCGTGCAAACTGAAACCAAAAC...TCTGTGAGCGGGGCTGGAGCCCTGTGGAGACGTGTGGTTAAACATAAACCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR CCA 90 bp ATAAAGCTTTATTTGAACTCCCTCCCCTACAGATCATTCAGATGCCCGGGACCAACACGGTCCCCACGGTaGACTCCATGCCTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: IKLYLNSLPYRSFRCPGPTRSPR*TPCLFS
Trigger: GCTGAAGAGGCATGGAGTCCACCGTGGGGACCGTGT...TGGTCCCGGGCATCTGAATGATCTGTAGGGGAGGGAGTTCAAATAAAGCTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp AACAAAGAGAGACTGGATCCAGACCTCCAAGTCTCATCATTGGACCTCAGTGGTACACGGGCATGTAGATaGCAACACGGTCCCCACGGT +
Preference number: 4 (lower is better)
Translates to: NKERLDPDLQVSSLDLSGTRACR*QHGPHG
Trigger: ACCGTGGGGACCGTGTTGCCATCTACATGCCCGTGT...ACCACTGAGGTCCAATGATGAGACTTGGAGGTCTGGATCCAGTCTCTCTTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp CCATGTCCAGGTTCCTCTCAGCAACATGGAAAGCTAAGCCATTTCACAAACGCATATGGACGATGCCCTTaGGCATTCCGGTGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: PCPGSSQQHGKLSHFTNAYGRCP*AFRCSL
Trigger: CAGGGAGCACCGGAATGCCCAAGGGCATCGTCCATA...TGCGTTTGTGAAATGGCTTAGCTTTCCATGTTGCTGAGAGGAACCTGGACATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp AACAAAGAGAGACTGGATCCAGACCTCCAAGTCTCATCATTGGACCTCAGTGGTTATGGACGATGCCCTTaGGCATTCCGGTGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: NKERLDPDLQVSSLDLSGYGRCP*AFRCSL
Trigger: CAGGGAGCACCGGAATGCCCAAGGGCATCGTCCATA...ACCACTGAGGTCCAATGATGAGACTTGGAGGTCTGGATCCAGTCTCTCTTTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp CCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACAGGTAAGATGTCACCTGGCTaGTGGTCAAACACAAGCTTG +
Preference number: 4 (lower is better)
Translates to: PLSICVPCSQHHLLGFTGKMSPG*WSNTSL
Trigger: CAAGCTTGTGTTTGACCACCAGCCAGGTGACATCTT...ACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp GCTTCAGAACTAAGGCGGCCACATTCACCCCACCGCTTAGGAGTTAGCTCCATTGCCAAAGATGTCACCTaGCTGGTGGTCAAACACAAG +
Preference number: 4 (lower is better)
Translates to: ASELRRPHSPHRLGVSSIAKDVT*LVVKHK
Trigger: CTTGTGTTTGACCACCAGCCAGGTGACATCTTTGGC...AATGGAGCTAACTCCTAAGCGGTGGGGTGAATGTGGCCGCCTTAGTTCTGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CCA 90 bp AAAATAAAGCTTTATTTGAACTCCCTCCCCTACAGATCATTCAGATGCCCGGGAGGTGGTCGCCATAGATaGTCCTGGCCATGCCCGGCC +
Preference number: 4 (lower is better)
Translates to: KIKLYLNSLPYRSFRCPGGGRHR*SWPCPA
Trigger: GGCCGGGCATGGCCAGGACCATCTATGGCGACCACC...TCCCGGGCATCTGAATGATCTGTAGGGGAGGGAGTTCAAATAAAGCTTTATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp CACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACAGAGTGAAGTAATAGCCTaGGTAGGCCTTGAAGTAGGC +
Preference number: 4 (lower is better)
Translates to: HHSVFVYPAANTTSWASQSEVIA*VGLEVG
Trigger: GCCTACTTCAAGGCCTACCCAGGCTATTACTTCACT...CTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp TTGGAGTATGTTGCCTCTCCTATCAAGAGGCATCTGGGGGCACAAAAATCTTTCTCTGGTACTGCAGGGTaGTCGGCGATGGCGTCCTCA +
Preference number: 4 (lower is better)
Translates to: LEYVASPIKRHLGAQKSFSGTAG*SAMASS
Trigger: TGAGGACGCCATCGCCGACCACCCTGCAGTACCAGA...GAAAGATTTTTGTGCCCCCAGATGCCTCTTGATAGGAGAGGCAACATACTCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CCA 90 bp CAAAAGACCACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGAAGATGCCGGAGGCTTaGAAGTTCTCAAGGGAACTG +
Preference number: 4 (lower is better)
Translates to: QKTTTQYLCTLQPTPPPGKMPEA*KFSREL
Trigger: CAGTTCCCTTGAGAACTTCCAAGCCTCCGGCATCTT...CCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTGGTCTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CCA 90 bp TGGGCTTCACAGGTTCACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGAAGAACCCAACTATTTaGAGTATGTTGCCTCTCCTA +
Preference number: 4 (lower is better)
Translates to: WASQVHSPKRPAQPRPSGKNPTI*SMLPLL
Trigger: TAGGAGAGGCAACATACTCCAAATAGTTGGGTTCTT...CCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTGAACCTGTGAAGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CCA 90 bp GTCTCATCATTGGACCTCAGTGGTTCTCACCGCCCCAACCACAGAGTGAAGGTCTCCAAGTCTCATCATTaGACCTCAGTGGTTCTCACC +
Preference number: 4 (lower is better)
Translates to: VSSLDLSGSHRPNHRVKVSKSHH*TSVVLT
Trigger: GGTGAGAACCACTGAGGTCCAATGATGAGACTTGGA...GACCTTCACTCTGTGGTTGGGGCGGTGAGAACCACTGAGGTCCAATGATGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp CAGGTTCACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGTACTCAGTGAAAACAAAGAGAGACTaGATCCAGACCTCCAAGTCT +
Preference number: 4 (lower is better)
Translates to: QVHSPKRPAQPRPSGYSVKTKRD*IQTSKS
Trigger: AGACTTGGAGGTCTGGATCCAGTCTCTCTTTGTTTT...CACTGAGTACCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTGAACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp AGACCACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCGAGGTAAGCACCCACTaGCGTCGTGATTTCCATTAT +
Preference number: 4 (lower is better)
Translates to: RPPLSICVPCSQHHLLGFEVSTH*RRDFHY
Trigger: ATAATGGAAATCACGACGCCAGTGGGTGCTTACCTC...GAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTGGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp CCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACAGGTGAGGTAAGCACCCACTaGCGTCGTGATTTCCATTAT +
Preference number: 4 (lower is better)
Translates to: PLSICVPCSQHHLLGFTGEVSTH*RRDFHY
Trigger: ATAATGGAAATCACGACGCCAGTGGGTGCTTACCTC...ACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR TCA 90 bp AACAAAGAGAGACTGGATCCAGACCTCCAAGTCTCATCATTGGACCTCAGTGGTAGCCTGGGTAGGCCTTaGAGTAGGCGTCCACAAATC +
Preference number: 4 (lower is better)
Translates to: NKERLDPDLQVSSLDLSGSLGRP*SRRPQI
Trigger: GATTTGTGGACGCCTACTTCAAGGCCTACCCAGGCT...ACCACTGAGGTCCAATGATGAGACTTGGAGGTCTGGATCCAGTCTCTCTTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR TCA 90 bp CCATGTCCAGGTTCCTCTCAGCAACATGGAAAGCTAAGCCATTTCACAAACGCAAAGCCCCGTCTCCAGTaGAGTAATAGCCTGGGTAGG +
Preference number: 4 (lower is better)
Translates to: PCPGSSQQHGKLSHFTNAKPRLQ*SNSLGR
Trigger: CCTACCCAGGCTATTACTTCACTGGAGACGGGGCTT...TGCGTTTGTGAAATGGCTTAGCTTTCCATGTTGCTGAGAGGAACCTGGACATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR TCA 90 bp ATAAAGCTTTATTTGAACTCCCTCCCCTACAGATCATTCAGATGCCCGGGACCATCAGGATCTCTGCGATaGTGCTGGGGTCCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: IKLYLNSLPYRSFRCPGPSGSLR*CWGPPR
Trigger: CCTTGGAGGACCCCAGCATCATCGCAGAGATCCTGA...TGGTCCCGGGCATCTGAATGATCTGTAGGGGAGGGAGTTCAAATAAAGCTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR GCA 90 bp AATAAAGCTTTATTTGAACTCCCTCCCCTACAGATCATTCAGATGCCCGGGACCATACGAGCCTGGCTGTaGTGCTGCTGCTGCAACTGC +
Preference number: 4 (lower is better)
Translates to: NKALFELPPLQIIQMPGTIRAWL*CCCCNC
Trigger: GCAGTTGCAGCAGCAGCAGCACAGCCAGGCTCGTAT...GGTCCCGGGCATCTGAATGATCTGTAGGGGAGGGAGTTCAAATAAAGCTTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000432802.6
CDS-3UTR GCA 90 bp TTGGAGTATGTTGCCTCTCCTATCAAGAGGCATCTGGGGGCACAAAAATCTTTCTGTCCTCACTGCCCATaGTCTCTGGGGCGCAAACAG +
Preference number: 4 (lower is better)
Translates to: LEYVASPIKRHLGAQKSFCPHCP*SLGRKQ
Trigger: CTGTTTGCGCCCCAGAGAGCATGGGCAGTGAGGACA...GAAAGATTTTTGTGCCCCCAGATGCCTCTTGATAGGAGAGGCAACATACTCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR GCA 90 bp ATAAAGCTTTATTTGAACTCCCTCCCCTACAGATCATTCAGATGCCCGGGACCACCTTGGGCATTCCGGTaGTCCCTGAGGTGTACAGCA +
Preference number: 4 (lower is better)
Translates to: IKLYLNSLPYRSFRCPGPPWAFR*SLRCTA
Trigger: TGCTGTACACCTCAGGGAGCACCGGAATGCCCAAGG...TGGTCCCGGGCATCTGAATGATCTGTAGGGGAGGGAGTTCAAATAAAGCTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp CCATGTCCAGGTTCCTCTCAGCAACATGGAAAGCTAAGCCATTTCACAAACGCAATAGAGCAGGTAGCCTaGCTGGGTATGGACGATGCC +
Preference number: 4 (lower is better)
Translates to: PCPGSSQQHGKLSHFTNAIEQVA*LGMDDA
Trigger: GGCATCGTCCATACCCAGGCAGGCTACCTGCTCTAT...TGCGTTTGTGAAATGGCTTAGCTTTCCATGTTGCTGAGAGGAACCTGGACATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp TCAAGAGGCATCTGGGGGCACAAAAATCTTTCTGGATCACAGCTTGAAGAAACATTCCGAGGGCCGTGGTaGGATGCAGATGCCACCTGT +
Preference number: 4 (lower is better)
Translates to: SRGIWGHKNLSGSQLEETFRGPW*DADATC
Trigger: ACAGGTGGCATCTGCATCGCACCACGGCCCTCGGAA...TGTTTCTTCAAGCTGTGATCCAGAAAGATTTTTGTGCCCCCAGATGCCTCTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR GCA 90 bp ACAGGTTCACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGTACTCAGTCTATTTGGAGTATGTTaGCTCTCCTATCAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: TGSLTQEASTTTTEWVLSLFGVC*LSYQEA
Trigger: TGCCTCTTGATAGGAGAGGCAACATACTCCAAATAG...ACTGAGTACCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTGAACCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CCA 90 bp CTTTATTTGAACTCCCTCCCCTACAGATCATTCAGATGCCCGGGACCATGTCCATCCAGATCCCCCATGTaGACCTTGTTGTCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: LYLNSLPYRSFRCPGPCPSRSPM*TLLSVL
Trigger: CAGGACAGACAACAAGGTCCACATGGGGGATCTGGA...TGGACATGGTCCCGGGCATCTGAATGATCTGTAGGGGAGGGAGTTCAAATAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp CAAAAGACCACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGAAGATGTCACCTGGCTaGTGGTCAAACACAAGCTTG +
Preference number: 4 (lower is better)
Translates to: QKTTTQYLCTLQPTPPPGKMSPG*WSNTSL
Trigger: CAAGCTTGTGTTTGACCACCAGCCAGGTGACATCTT...CCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTGGTCTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp AACAAAGAGAGACTGGATCCAGACCTCCAAGTCTCATCATTGGACCTCAGTGGTCAAAAAGGACGCTGGTaGCACCATTGCAGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: NKERLDPDLQVSSLDLSGQKGRW*HHCREA
Trigger: GGCCTCTCTGCAATGGTGCCACCAGCGTCCTTTTTG...ACCACTGAGGTCCAATGATGAGACTTGGAGGTCTGGATCCAGTCTCTCTTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp CACAGAGTGAAGGTCAGGCAGCGTTTGCCAGGATTTGGCTCTGACCAAGTTAGTTCTCAAAAAGGACGCTaGTGGCACCATTGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: HRVKVRQRLPGFGSDQVSSQKGR*WHHCRE
Trigger: CTCTCTGCAATGGTGCCACCAGCGTCCTTTTTGAGA...ACTAACTTGGTCAGAGCCAAATCCTGGCAAACGCTGCCTGACCTTCACTCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CCA 90 bp CTCCAAGTCTCATCATTGGACCTCAGTGGTTCTCACCGCCCCAACCACAGAGTGAGCATTGGGATAAACTaGGGTGCTCTCAAAAAGGAC +
Preference number: 4 (lower is better)
Translates to: LQVSSLDLSGSHRPNHRVSIGIN*GALKKD
Trigger: GTCCTTTTTGAGAGCACCCCAGTTTATCCCAATGCT...CACTCTGTGGTTGGGGCGGTGAGAACCACTGAGGTCCAATGATGAGACTTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp AGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACAGGTTCACTCAGTGAAGTAATAGCCTaGGTAGGCCTTGAAGTAGGC +
Preference number: 4 (lower is better)
Translates to: SICVPCSQHHLLGFTGSLSEVIA*VGLEVG
Trigger: GCCTACTTCAAGGCCTACCCAGGCTATTACTTCACT...GAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp ATAAAGCTTTATTTGAACTCCCTCCCCTACAGATCATTCAGATGCCCGGGACCACTCAGGGGTACCTTCTaGGAAGGACAAGCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: IKLYLNSLPYRSFRCPGPLRGTF*EGQARA
Trigger: AGCCCTGGCTTGTCCTTCCCAGAAGGTACCCCTGAG...TGGTCCCGGGCATCTGAATGATCTGTAGGGGAGGGAGTTCAAATAAAGCTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CCA 90 bp ATGCCCGGGACCATGTCCAGGTTCCTCTCAGCAACATGGAAAGCTAAGCCATTTAAGATGCCGGAGGCTTaGAAGTTCTCAAGGGAACTG +
Preference number: 4 (lower is better)
Translates to: MPGTMSRFLSATWKAKPFKMPEA*KFSREL
Trigger: CAGTTCCCTTGAGAACTTCCAAGCCTCCGGCATCTT...AAATGGCTTAGCTTTCCATGTTGCTGAGAGGAACCTGGACATGGTCCCGGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CCA 90 bp CCAGGTTCCTCTCAGCAACATGGAAAGCTAAGCCATTTCACAAACGCACAACTGGCCAACACCACCTCCTaGGCTTCACAGGTTCACTCA +
Preference number: 4 (lower is better)
Translates to: PGSSQQHGKLSHFTNAQLANTTS*ASQVHS
Trigger: TGAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGC...CAGTTGTGCGTTTGTGAAATGGCTTAGCTTTCCATGTTGCTGAGAGGAACCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp CTTTATTTGAACTCCCTCCCCTACAGATCATTCAGATGCCCGGGACCATGTCCAGCGAAGTGGAGGAAGTaGAAGCGATCCCAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: LYLNSLPYRSFRCPGPCPAKWRK*KRSQGC
Trigger: ACAACCTTGGGATCGCTTCCACTTCCTCCACTTCGC...TGGACATGGTCCCGGGCATCTGAATGATCTGTAGGGGAGGGAGTTCAAATAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537502.5
CDS-3UTR CCA 90 bp CTCCTATCAAGAGGCATCTGGGGGCACAAAAATCTTTCTGGATCACAGCTTGAACCATGCGGTGCGAAGTaGAGGAAGTGGAAGCGATCC +
Preference number: 4 (lower is better)
Translates to: LLSRGIWGHKNLSGSQLEPCGAK*RKWKRS
Trigger: GGATCGCTTCCACTTCCTCCACTTCGCACCGCATGG...TTCAAGCTGTGATCCAGAAAGATTTTTGTGCCCCCAGATGCCTCTTGATAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000537502.5
CDS-3UTR TCA 90 bp CAAAGAGAGACTGGATCCAGACCTCCAAGTCTCATCATTGGACCTCAGTGGTTCGCTGGTCCAAGCAGTTaGCAGAGACATTTAACTGGC +
Preference number: 4 (lower is better)
Translates to: QRETGSRPPSLIIGPQWFAGPSS*QRHLTG
Trigger: GCCAGTTAAATGTCTCTGTCAACTGCTTGGACCAGC...GAACCACTGAGGTCCAATGATGAGACTTGGAGGTCTGGATCCAGTCTCTCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000432802.6
CDS-3UTR TCA 90 bp GTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACAGGTTCACTCACGCCATAGAACTGATTaGTCTTCAACCTCTCTACTG +
Preference number: 4 (lower is better)
Translates to: VFVYPAANTTSWASQVHSRHRTD*SSTSLL
Trigger: CAGTAGAGAGGTTGAAGATCAATCAGTTCTATGGCG...TGAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR TCA 90 bp TTGGAGTATGTTGCCTCTCCTATCAAGAGGCATCTGGGGGCACAAAAATCTTTCAAGCCCCGTCTCCAGTaGAGTAATAGCCTGGGTAGG +
Preference number: 4 (lower is better)
Translates to: LEYVASPIKRHLGAQKSFKPRLQ*SNSLGR
Trigger: CCTACCCAGGCTATTACTTCACTGGAGACGGGGCTT...GAAAGATTTTTGTGCCCCCAGATGCCTCTTGATAGGAGAGGCAACATACTCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR TCA 90 bp ATGTCCAGGTTCCTCTCAGCAACATGGAAAGCTAAGCCATTTCACAAACGCACAAGGCAGCTTCTCCTTTaGTGTCGTGGGGGTAGCCAA +
Preference number: 4 (lower is better)
Translates to: MSRFLSATWKAKPFHKRTRQLLL*CRGGSQ
Trigger: TTGGCTACCCCCACGACATCAAAGGAGAAGCTGCCT...TGTGCGTTTGTGAAATGGCTTAGCTTTCCATGTTGCTGAGAGGAACCTGGACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR TCA 90 bp ACTGGCGTCGTGATTTCCATTATCTTGCTAATGTTGACAGCACCTAAGTCACATGCCCCAACCACAGAGTaGAGGTCAGGCAGCGTTTGC +
Preference number: 4 (lower is better)
Translates to: TGVVISIILLMLTAPKSHAPTTE*RSGSVC
Trigger: GCAAACGCTGCCTGACCTTCACTCTGTGGTTGGGGC...ATGTGACTTAGGTGCTGTCAACATTAGCAAGATAATGGAAATCACGACGCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp ACTGGCGTCGTGATTTCCATTATCTTGCTAATGTTGACAGCACCTAAGTCACATCCACGGTGGACTCCATaGCTCTTCAGCGTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: TGVVISIILLMLTAPKSHPRWTP*LFSVLA
Trigger: GGCCAACACGCTGAAGAGGCATGGAGTCCACCGTGG...ATGTGACTTAGGTGCTGTCAACATTAGCAAGATAATGGAAATCACGACGCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp AAAATAAAGCTTTATTTGAACTCCCTCCCCTACAGATCATTCAGATGCCCGGGAGGCACAGGCCAGCATTaGTGCCACAGCCAATGGGGA +
Preference number: 4 (lower is better)
Translates to: KIKLYLNSLPYRSFRCPGGTGQH*CHSQWG
Trigger: TCCCCATTGGCTGTGGCAGCAATGCTGGCCTGTGCC...TCCCGGGCATCTGAATGATCTGTAGGGGAGGGAGTTCAAATAAAGCTTTATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp AATAAAGCTTTATTTGAACTCCCTCCCCTACAGATCATTCAGATGCCCGGGACCGTGGTGCGATGCAGATaGCACCTGTTTCTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: NKALFELPPLQIIQMPGTVVRCR*HLFLSA
Trigger: GGCAGACAGAAACAGGTGGCATCTGCATCGCACCAC...GGTCCCGGGCATCTGAATGATCTGTAGGGGAGGGAGTTCAAATAAAGCTTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp CCAGGTTCCTCTCAGCAACATGGAAAGCTAAGCCATTTCACAAACGCACAACTGCACTTAGCAGCAGCCTaGTTGTCCTTGCACTTCTGG +
Preference number: 4 (lower is better)
Translates to: PGSSQQHGKLSHFTNAQLHLAAA*LSLHFW
Trigger: CCAGAAGTGCAAGGACAAGCAGGCTGCTGCTAAGTG...CAGTTGTGCGTTTGTGAAATGGCTTAGCTTTCCATGTTGCTGAGAGGAACCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR GCA 90 bp AAGAGGGCAGAGGAATGGAGATGGCAATGCCTTTTCATTCCAGGAAACCAAACTAGGTCAGGCAGCGTTTaGCAGGATTTGGCTCTGACC +
Preference number: 4 (lower is better)
Translates to: KRAEEWRWQCLFIPGNQTRSGSV*QDLALT
Trigger: GGTCAGAGCCAAATCCTGGCAAACGCTGCCTGACCT...AGTTTGGTTTCCTGGAATGAAAAGGCATTGCCATCTCCATTCCTCTGCCCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CCA 90 bp ACATTAAAACAAAGAGAGACTGGATCCAGACCTCCAAGTCTCATCATTGGACCTGGACAGCTCCGATCCTaGCACAGGCCAGCATTGCTG +
Preference number: 4 (lower is better)
Translates to: TLKQRETGSRPPSLIIGPGQLRS*HRPALL
Trigger: CAGCAATGCTGGCCTGTGCCAGGATCGGAGCTGTCC...AGGTCCAATGATGAGACTTGGAGGTCTGGATCCAGTCTCTCTTTGTTTTAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp ATAAAGCTTTATTTGAACTCCCTCCCCTACAGATCATTCAGATGCCCGGGACCACCACCCCGGAGTCCTTaGTTGAAGGTGATAACCACC +
Preference number: 4 (lower is better)
Translates to: IKLYLNSLPYRSFRCPGPPPRSP*LKVITT
Trigger: GGTGGTTATCACCTTCAACCAAGGACTCCGGGGTGG...TGGTCCCGGGCATCTGAATGATCTGTAGGGGAGGGAGTTCAAATAAAGCTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp ACTGGCGTCGTGATTTCCATTATCTTGCTAATGTTGACAGCACCTAAGTCACATTTCTTCCGAGGGCCGTaGTGCGATGCAGATGCCACC +
Preference number: 4 (lower is better)
Translates to: TGVVISIILLMLTAPKSHFFRGP*CDADAT
Trigger: GGTGGCATCTGCATCGCACCACGGCCCTCGGAAGAA...ATGTGACTTAGGTGCTGTCAACATTAGCAAGATAATGGAAATCACGACGCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp AGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACAGGTTCACTCGCAGAGGAATGGAGATaGCAATGCCTTTTCATTCCA +
Preference number: 4 (lower is better)
Translates to: SICVPCSQHHLLGFTGSLAEEWR*QCLFIP
Trigger: TGGAATGAAAAGGCATTGCCATCTCCATTCCTCTGC...GAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CCA 90 bp CAGGTTCACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGTACTCAGTGGAAACAGAACATAACTaGAGTAGCTTCAGAACTAAG +
Preference number: 4 (lower is better)
Translates to: QVHSPKRPAQPRPSGYSVETEHN*SSFRTK
Trigger: CTTAGTTCTGAAGCTACTCCAGTTATGTTCTGTTTC...CACTGAGTACCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTGAACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CCA 90 bp ATGTCCAGGTTCCTCTCAGCAACATGGAAAGCTAAGCCATTTCACAAACGCACAGCCAACACCACCTCCTaGGCTTCACAGGTTCACTCA +
Preference number: 4 (lower is better)
Translates to: MSRFLSATWKAKPFHKRTANTTS*ASQVHS
Trigger: TGAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGC...TGTGCGTTTGTGAAATGGCTTAGCTTTCCATGTTGCTGAGAGGAACCTGGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp CTCCAAGTCTCATCATTGGACCTCAGTGGTTCTCACCGCCCCAACCACAGAGTGTTCCTCTCAGCAACATaGAAAGCTAAGCCATTTCAC +
Preference number: 4 (lower is better)
Translates to: LQVSSLDLSGSHRPNHRVFLSAT*KAKPFH
Trigger: GTGAAATGGCTTAGCTTTCCATGTTGCTGAGAGGAA...CACTCTGTGGTTGGGGCGGTGAGAACCACTGAGGTCCAATGATGAGACTTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp CTGCAGCCAACACCACCTCCTGGGCTTCACAGGTTCACTCACCCAAGAGGCCAGAAGAACCCAACTATTTaGAGTATGTTGATGACATCA +
Preference number: 4 (lower is better)
Translates to: LQPTPPPGLHRFTHPRGQKNPTI*SMLMTS
Trigger: TGATGTCATCAACATACTCCAAATAGTTGGGTTCTT...CTGGCCTCTTGGGTGAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432802.6
CDS-3UTR TCA 90 bp TCAAGAGGCATCTGGGGGCACAAAAATCTTTCTGGATCACAGCTTGAAGAAACATTGTTGTCTGTCCTGTaGGCCACCAGGACATGCTGC +
Preference number: 4 (lower is better)
Translates to: SRGIWGHKNLSGSQLEETLLSVL*ATRTCC
Trigger: GCAGCATGTCCTGGTGGCTCACAGGACAGACAACAA...TGTTTCTTCAAGCTGTGATCCAGAAAGATTTTTGTGCCCCCAGATGCCTCTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR TCA 90 bp ATAAAGCTTTATTTGAACTCCCTCCCCTACAGATCATTCAGATGCCCGGGACCACTGCACCACCACATCTaGGTCACCCGCACTATCTTT +
Preference number: 4 (lower is better)
Translates to: IKLYLNSLPYRSFRCPGPLHHHI*VTRTIF
Trigger: AAAGATAGTGCGGGTGACTCAGATGTGGTGGTGCAG...TGGTCCCGGGCATCTGAATGATCTGTAGGGGAGGGAGTTCAAATAAAGCTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR GCA 90 bp AAAATAAAGCTTTATTTGAACTCCCTCCCCTACAGATCATTCAGATGCCCGGGATGCACGGTGGGGCAGTaGTTCACAGCCTCATCCACT +
Preference number: 4 (lower is better)
Translates to: KIKLYLNSLPYRSFRCPGCTVGQ*FTASST
Trigger: AGTGGATGAGGCTGTGAAGCACTGCCCCACCGTGCA...TCCCGGGCATCTGAATGATCTGTAGGGGAGGGAGTTCAAATAAAGCTTTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp ACTGGCGTCGTGATTTCCATTATCTTGCTAATGTTGACAGCACCTAAGTCACATTGCACGGTGGGGCAGTaGTTCACAGCCTCATCCACT +
Preference number: 4 (lower is better)
Translates to: TGVVISIILLMLTAPKSHCTVGQ*FTASST
Trigger: AGTGGATGAGGCTGTGAAGCACTGCCCCACCGTGCA...ATGTGACTTAGGTGCTGTCAACATTAGCAAGATAATGGAAATCACGACGCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp ACATTAAAACAAAGAGAGACTGGATCCAGACCTCCAAGTCTCATCATTGGACCTAGGGCCGTGGTGCGATaGAGATGCCACCTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: TLKQRETGSRPPSLIIGPRAVVR*RCHLFL
Trigger: CAGAAACAGGTGGCATCTGCATCGCACCACGGCCCT...AGGTCCAATGATGAGACTTGGAGGTCTGGATCCAGTCTCTCTTTGTTTTAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp AGACCACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACTACATGTGAGTGTTaGATGCTGTTCTTCCACAAT +
Preference number: 4 (lower is better)
Translates to: RPPLSICVPCSQHHLLGFTTCEC*MLFFHN
Trigger: ATTGTGGAAGAACAGCATGCAACACTCACATGTAGT...GAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTGGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CCA 90 bp AATAAAGCTTTATTTGAACTCCCTCCCCTACAGATCATTCAGATGCCCGGGACCTCCAGATCCCCCATGTaGACCTTGTTGTCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: NKALFELPPLQIIQMPGTSRSPM*TLLSVL
Trigger: CAGGACAGACAACAAGGTCCACATGGGGGATCTGGA...GGTCCCGGGCATCTGAATGATCTGTAGGGGAGGGAGTTCAAATAAAGCTTTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp CTCCTATCAAGAGGCATCTGGGGGCACAAAAATCTTTCTGGATCACAGCTTGAAAATGACAGCACTTTCTaGTACTGCAGGGTGGTCGGC +
Preference number: 4 (lower is better)
Translates to: LLSRGIWGHKNLSGSQLENDSTF*YCRVVG
Trigger: GCCGACCACCCTGCAGTACCAGAAAGTGCTGTCATT...TTCAAGCTGTGATCCAGAAAGATTTTTGTGCCCCCAGATGCCTCTTGATAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CCA 90 bp TTGGAGTATGTTGCCTCTCCTATCAAGAGGCATCTGGGGGCACAAAAATCTTTCCAGGCACAGCATATTTaGCGATCTTGGTGGCCACCA +
Preference number: 4 (lower is better)
Translates to: LEYVASPIKRHLGAQKSFQAQHI*RSWWPP
Trigger: TGGTGGCCACCAAGATCGCCAAATATGCTGTGCCTG...GAAAGATTTTTGTGCCCCCAGATGCCTCTTGATAGGAGAGGCAACATACTCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CCA 90 bp CAAAATAAAGCTTTATTTGAACTCCCTCCCCTACAGATCATTCAGATGCCCGGGTCCTGGGACCTCCAATaGATGGGAGAAAGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: QNKALFELPPLQIIQMPGSWDLQ*MGERAL
Trigger: GAGAGCCCTTTCTCCCATCCATTGGAGGTCCCAGGA...CCCGGGCATCTGAATGATCTGTAGGGGAGGGAGTTCAAATAAAGCTTTATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CCA 90 bp AGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACAGGTTCACTCCTATCAAGAGGCATCTaGGGGCACAAAAATCTTTCT +
Preference number: 4 (lower is better)
Translates to: SICVPCSQHHLLGFTGSLLSRGI*GHKNLS
Trigger: AGAAAGATTTTTGTGCCCCCAGATGCCTCTTGATAG...GAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CCA 90 bp ATAAAGCTTTATTTGAACTCCCTCCCCTACAGATCATTCAGATGCCCGGGACCAATCATTGGACCTCAGTaGTTCTCACCGCCCCAACCA +
Preference number: 4 (lower is better)
Translates to: IKLYLNSLPYRSFRCPGPIIGPQ*FSPPQP
Trigger: TGGTTGGGGCGGTGAGAACCACTGAGGTCCAATGAT...TGGTCCCGGGCATCTGAATGATCTGTAGGGGAGGGAGTTCAAATAAAGCTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp ATGTCCAGGTTCCTCTCAGCAACATGGAAAGCTAAGCCATTTCACAAACGCACAATCATTGGACCTCAGTaGTTCTCACCGCCCCAACCA +
Preference number: 4 (lower is better)
Translates to: MSRFLSATWKAKPFHKRTIIGPQ*FSPPQP
Trigger: TGGTTGGGGCGGTGAGAACCACTGAGGTCCAATGAT...TGTGCGTTTGTGAAATGGCTTAGCTTTCCATGTTGCTGAGAGGAACCTGGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp AGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACAGGTTCACTCTTCCTCTCAGCAACATaGAAAGCTAAGCCATTTCAC +
Preference number: 4 (lower is better)
Translates to: SICVPCSQHHLLGFTGSLFLSAT*KAKPFH
Trigger: GTGAAATGGCTTAGCTTTCCATGTTGCTGAGAGGAA...GAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR TCA 90 bp ACTGGCGTCGTGATTTCCATTATCTTGCTAATGTTGACAGCACCTAAGTCACATCGTGGGGGTAGCCAATaGCAGCACTTTCTGGTACTG +
Preference number: 4 (lower is better)
Translates to: TGVVISIILLMLTAPKSHRGGSQ*QHFLVL
Trigger: CAGTACCAGAAAGTGCTGTCATTGGCTACCCCCACG...ATGTGACTTAGGTGCTGTCAACATTAGCAAGATAATGGAAATCACGACGCCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR GCA 90 bp ATAAAGCTTTATTTGAACTCCCTCCCCTACAGATCATTCAGATGCCCGGGACCAATGGACTTGAGCTCCTaGACCACCACATCTGAGTCA +
Preference number: 4 (lower is better)
Translates to: IKLYLNSLPYRSFRCPGPMDLSS*TTTSES
Trigger: TGACTCAGATGTGGTGGTGCAGGAGCTCAAGTCCAT...TGGTCCCGGGCATCTGAATGATCTGTAGGGGAGGGAGTTCAAATAAAGCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR GCA 90 bp ATGTCCAGGTTCCTCTCAGCAACATGGAAAGCTAAGCCATTTCACAAACGCACATACAGATCATTCAGATaGCCGGGACCATGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: MSRFLSATWKAKPFHKRTYRSFR*PGPCPG
Trigger: ACCTGGACATGGTCCCGGGCATCTGAATGATCTGTA...TGTGCGTTTGTGAAATGGCTTAGCTTTCCATGTTGCTGAGAGGAACCTGGACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp AAAATAAAGCTTTATTTGAACTCCCTCCCCTACAGATCATTCAGATGCCCGGGATGCTGCCACAGCCAATaGGGACACGGGCATGTAGAT +
Preference number: 4 (lower is better)
Translates to: KIKLYLNSLPYRSFRCPGCCHSQ*GHGHVD
Trigger: ATCTACATGCCCGTGTCCCCATTGGCTGTGGCAGCA...TCCCGGGCATCTGAATGATCTGTAGGGGAGGGAGTTCAAATAAAGCTTTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp CAAAATAAAGCTTTATTTGAACTCCCTCCCCTACAGATCATTCAGATGCCCGGGGCAAAGATGACTGTGTaGACAGCTCCGATCCTGGCA +
Preference number: 4 (lower is better)
Translates to: QNKALFELPPLQIIQMPGAKMTV*TAPILA
Trigger: TGCCAGGATCGGAGCTGTCCACACAGTCATCTTTGC...CCCGGGCATCTGAATGATCTGTAGGGGAGGGAGTTCAAATAAAGCTTTATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp ATAAAGCTTTATTTGAACTCCCTCCCCTACAGATCATTCAGATGCCCGGGACCAAGTACCGACCAGCATTaGGATAAACTGGGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: IKLYLNSLPYRSFRCPGPSTDQH*DKLGCS
Trigger: AGAGCACCCCAGTTTATCCCAATGCTGGTCGGTACT...TGGTCCCGGGCATCTGAATGATCTGTAGGGGAGGGAGTTCAAATAAAGCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CCA 90 bp ACTGGCGTCGTGATTTCCATTATCTTGCTAATGTTGACAGCACCTAAGTCACATGTGTCTCCCAGCTCCTaGGCCTCACTAGTGATGATC +
Preference number: 4 (lower is better)
Translates to: TGVVISIILLMLTAPKSHVSPSS*ASLVMI
Trigger: GATCATCACTAGTGAGGCCCAGGAGCTGGGAGACAC...ATGTGACTTAGGTGCTGTCAACATTAGCAAGATAATGGAAATCACGACGCCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CCA 90 bp GAGAGACTGGATCCAGACCTCCAAGTCTCATCATTGGACCTCAGTGGTTCTCACGTATCTAGACAGATCTaGAGAAAACACGGTTGCTAC +
Preference number: 4 (lower is better)
Translates to: ERLDPDLQVSSLDLSGSHVSRQI*RKHGCY
Trigger: GTAGCAACCGTGTTTTCTCCAGATCTGTCTAGATAC...GTGAGAACCACTGAGGTCCAATGATGAGACTTGGAGGTCTGGATCCAGTCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR TCA 90 bp ACTGGCGTCGTGATTTCCATTATCTTGCTAATGTTGACAGCACCTAAGTCACATGTAGTTCCCTGTAGGTaGTCCTCACTTCCGTTCCAG +
Preference number: 4 (lower is better)
Translates to: TGVVISIILLMLTAPKSHVVPCR*SSLPFQ
Trigger: CTGGAACGGAAGTGAGGATCACCTACAGGGAACTAC...ATGTGACTTAGGTGCTGTCAACATTAGCAAGATAATGGAAATCACGACGCCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000432802.6
CDS-3UTR GCA 90 bp CAAAATAAAGCTTTATTTGAACTCCCTCCCCTACAGATCATTCAGATGCCCGGGAGTATTTGTGTACCCTaGAGCCAACACCACCTCCTG +
Preference number: 4 (lower is better)
Translates to: QNKALFELPPLQIIQMPGSICVP*SQHHLL
Trigger: CAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACT...CCCGGGCATCTGAATGATCTGTAGGGGAGGGAGTTCAAATAAAGCTTTATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR GCA 90 bp CCATGTCCAGGTTCCTCTCAGCAACATGGAAAGCTAAGCCATTTCACAAACGCATCTGGACCTGGCAATTaGATTAACCACTTTCCCACT +
Preference number: 4 (lower is better)
Translates to: PCPGSSQQHGKLSHFTNASGPGN*INHFPT
Trigger: AGTGGGAAAGTGGTTAATGCAATTGCCAGGTCCAGA...TGCGTTTGTGAAATGGCTTAGCTTTCCATGTTGCTGAGAGGAACCTGGACATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537502.5
CDS-3UTR CCA 90 bp TTGGAGTATGTTGCCTCTCCTATCAAGAGGCATCTGGGGGCACAAAAATCTTTCAGTGAAGTAATAGCCTaGGTAGGCCTTGAAGTAGGC +
Preference number: 4 (lower is better)
Translates to: LEYVASPIKRHLGAQKSFSEVIA*VGLEVG
Trigger: GCCTACTTCAAGGCCTACCCAGGCTATTACTTCACT...GAAAGATTTTTGTGCCCCCAGATGCCTCTTGATAGGAGAGGCAACATACTCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CCA 90 bp GTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACAGGTTCACTCAGAAACAGAACATAACTaGAGTAGCTTCAGAACTAAG +
Preference number: 4 (lower is better)
Translates to: VFVYPAANTTSWASQVHSETEHN*SSFRTK
Trigger: CTTAGTTCTGAAGCTACTCCAGTTATGTTCTGTTTC...TGAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR GCA 90 bp CTTTATTTGAACTCCCTCCCCTACAGATCATTCAGATGCCCGGGACCATGTCCAACTACATGTGAGTGTTaGATGCTGTTCTTCCACAAT +
Preference number: 4 (lower is better)
Translates to: LYLNSLPYRSFRCPGPCPTTCEC*MLFFHN
Trigger: ATTGTGGAAGAACAGCATGCAACACTCACATGTAGT...TGGACATGGTCCCGGGCATCTGAATGATCTGTAGGGGAGGGAGTTCAAATAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CCA 90 bp AAGAGGGCAGAGGAATGGAGATGGCAATGCCTTTTCATTCCAGGAAACCAAACTAGCATTGGGATAAACTaGGGTGCTCTCAAAAAGGAC +
Preference number: 4 (lower is better)
Translates to: KRAEEWRWQCLFIPGNQTSIGIN*GALKKD
Trigger: GTCCTTTTTGAGAGCACCCCAGTTTATCCCAATGCT...AGTTTGGTTTCCTGGAATGAAAAGGCATTGCCATCTCCATTCCTCTGCCCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CCA 90 bp AACAAAGAGAGACTGGATCCAGACCTCCAAGTCTCATCATTGGACCTCAGTGGTAAGAACCCAACTATTTaGAGTATGTTGCCTCTCCTA +
Preference number: 4 (lower is better)
Translates to: NKERLDPDLQVSSLDLSGKNPTI*SMLPLL
Trigger: TAGGAGAGGCAACATACTCCAAATAGTTGGGTTCTT...ACCACTGAGGTCCAATGATGAGACTTGGAGGTCTGGATCCAGTCTCTCTTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CCA 90 bp AAAATAAAGCTTTATTTGAACTCCCTCCCCTACAGATCATTCAGATGCCCGGGACTATCAAGAGGCATCTaGGGGCACAAAAATCTTTCT +
Preference number: 4 (lower is better)
Translates to: KIKLYLNSLPYRSFRCPGLSRGI*GHKNLS
Trigger: AGAAAGATTTTTGTGCCCCCAGATGCCTCTTGATAG...TCCCGGGCATCTGAATGATCTGTAGGGGAGGGAGTTCAAATAAAGCTTTATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS GCA 90 bp ACTCAGCGCGGGATACGAGCCTGGCTGTGCTGCTGCTGCTGCAACTaGGGGAGCGCTGCCCGAGGGTCCCGAGGCCGCCCTGCGCGGCGC +
Preference number: 5 (lower is better)
Translates to: TQRGIRAWLCCCCCN*GSAARGSRGRPARR
Trigger: GCGCCGCGCAGGGCGGCCTCGGGACCCTCGGGCAGCGCTCCCGCAGTTGCAGCAGCAGCAGCACAGCCAGGCTCGTATCCCGCGCTGAGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000376726.3
ENST00000432802.6
CDS GCA 90 bp CCGCGCCAGAGGCCCCCAGAAGGCGGCCGGCTCCCGGGCTGCCTGTaGACTCAGCGCGGGATACGAGCCTGGCTGTGCTGCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: PRQRPPEGGRLPGCL*TQRGIRAWLCCCCC
Trigger: GCAGCAGCAGCAGCACAGCCAGGCTCGTATCCCGCGCTGAGTGCACAGGCAGCCCGGGAGCCGGCCGCCTTCTGGGGGCCTCTGGCGCGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000376726.3
ENST00000432802.6
CDS CCA 90 bp GGCCGGCTCCCGGGCTGCCTGTGCACTCAGCGCGGGATACGAGCCTaGCTGTGCTGCTGCTGCTGCAACTGCGGGAGCGCTGCCCGAGGG +
Preference number: 5 (lower is better)
Translates to: GRLPGCLCTQRGIRA*LCCCCCNCGSAARG
Trigger: CCCTCGGGCAGCGCTCCCGCAGTTGCAGCAGCAGCAGCACAGCCAGGCTCGTATCCCGCGCTGAGTGCACAGGCAGCCCGGGAGCCGGCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000376726.3
ENST00000432802.6
CDS CCA 90 bp CGCCGCCATCTAGGCAGGCTACCTGAGCTCTCTGTGCTCCCAGAGTaGGTGCCTCACGCCCGGGGCGCCCCGTGGAGTCTCCGCGGGCCC +
Preference number: 5 (lower is better)
Translates to: RRHLGRLPELSVLPE*VPHARGAPWSLRGP
Trigger: GGGCCCGCGGAGACTCCACGGGGCGCCCCGGGCGTGAGGCACCCACTCTGGGAGCACAGAGAGCTCAGGTAGCCTGCCTAGATGGCGGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS GCA 90 bp GGCTGCCTGTGCACTCAGCGCGGGATACGAGCCTGGCTGTGCTGCTaGTGCTGCAACTGCGGGAGCGCTGCCCGAGGGTCCCGAGGCCGC +
Preference number: 5 (lower is better)
Translates to: GCLCTQRGIRAWLCC*CCNCGSAARGSRGR
Trigger: GCGGCCTCGGGACCCTCGGGCAGCGCTCCCGCAGTTGCAGCAGCAGCAGCACAGCCAGGCTCGTATCCCGCGCTGAGTGCACAGGCAGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000376726.3
ENST00000432802.6
CDS GCA 90 bp CCGGGCTGCCTGTGCACTCAGCGCGGGATACGAGCCTGGCTGTGCTaGTGCTGCTGCAACTGCGGGAGCGCTGCCCGAGGGTCCCGAGGC +
Preference number: 5 (lower is better)
Translates to: PGCLCTQRGIRAWLC*CCCNCGSAARGSRG
Trigger: GCCTCGGGACCCTCGGGCAGCGCTCCCGCAGTTGCAGCAGCAGCAGCACAGCCAGGCTCGTATCCCGCGCTGAGTGCACAGGCAGCCCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000376726.3
ENST00000432802.6
CDS GCA 90 bp TGCCTGTGCACTCAGCGCGGGATACGAGCCTGGCTGTGCTGCTGCTaGTGCAACTGCGGGAGCGCTGCCCGAGGGTCCCGAGGCCGCCCT +
Preference number: 5 (lower is better)
Translates to: CLCTQRGIRAWLCCC*CNCGSAARGSRGRP
Trigger: AGGGCGGCCTCGGGACCCTCGGGCAGCGCTCCCGCAGTTGCAGCAGCAGCAGCACAGCCAGGCTCGTATCCCGCGCTGAGTGCACAGGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000376726.3
ENST00000432802.6
CDS GCA 90 bp CTCCCGGGCTGCCTGTGCACTCAGCGCGGGATACGAGCCTGGCTGTaGTGCTGCTGCTGCAACTGCGGGAGCGCTGCCCGAGGGTCCCGA +
Preference number: 5 (lower is better)
Translates to: LPGCLCTQRGIRAWL*CCCCNCGSAARGSR
Trigger: TCGGGACCCTCGGGCAGCGCTCCCGCAGTTGCAGCAGCAGCAGCACAGCCAGGCTCGTATCCCGCGCTGAGTGCACAGGCAGCCCGGGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000376726.3
ENST00000432802.6
CDS TCA 90 bp GGACACACTGTGACACAGGGTGGCCTCCCAGCGGGAGGGCAAGCCTaGCCCCAAGCCACTGGGCAGGGCAGGAGAAGCCAGTCTGCCCAG +
Preference number: 5 (lower is better)
Translates to: GHTVTQGGLPAGGQA*PQATGQGRRSQSAQ
Trigger: CTGGGCAGACTGGCTTCTCCTGCCCTGCCCAGTGGCTTGGGGTCAGGCTTGCCCTCCCGCTGGGAGGCCACCCTGTGTCACAGTGTGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS GCA 90 bp GGCATGGGGTCAGTGTGTGTCCAGGTCACGCCAGGCCAGGCAGTGTaGCTGGATGGACCTGGCATTGCAACACCTAGGTGCTCCCGCCCC +
Preference number: 5 (lower is better)
Translates to: GMGSVCVQVTPGQAV*LDGPGIATPRCSRP
Trigger: GGGGCGGGAGCACCTAGGTGTTGCAATGCCAGGTCCATCCAGGCACACTGCCTGGCCTGGCGTGACCTGGACACACACTGACCCCATGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS CCA 90 bp TGGCAACACGGTCCCCACGGTGGACTCCATGCCTCTTCAGCGTGTTaGCCAGGCGGCACGTGGTCTCCAGTAGTTCCCGGCCATGCGGTG +
Preference number: 5 (lower is better)
Translates to: WQHGPHGGLHASSAC*PGGTWSPVVPGHAV
Trigger: CACCGCATGGCCGGGAACTACTGGAGACCACGTGCCGCCTGGCCAACACGCTGAAGAGGCATGGAGTCCACCGTGGGGACCGTGTTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537502.5
CDS TCA 90 bp CACCATGAGCAGCCAGAGGCTGCCACCCTGGACAACACAGACAGCTaGGAGGCAGCTGAGAGTTCTGCTGGGCAGCACGGGCCAGCCCAC +
Preference number: 5 (lower is better)
Translates to: HHEQPEAATLDNTDS*EAAESSAGQHGPAH
Trigger: GTGGGCTGGCCCGTGCTGCCCAGCAGAACTCTCAGCTGCCTCTCAGCTGTCTGTGTTGTCCAGGGTGGCAGCCTCTGGCTGCTCATGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS CCA 90 bp GACGCCAACCTCAGGGGTACCTTCTGGGAAGGACAAGCCAGGGCTTaGGTGCCCGCCCATCCCAAGAGCCCCACAAGGTGCCAGCTCACT +
Preference number: 5 (lower is better)
Translates to: DANLRGTFWEGQARA*VPAHPKSPTRCQLT
Trigger: AGTGAGCTGGCACCTTGTGGGGCTCTTGGGATGGGCGGGCACCCAAGCCCTGGCTTGTCCTTCCCAGAAGGTACCCCTGAGGTTGGCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000484396.1
ENST00000537502.5
CDS GCA 90 bp TGCCACCTGTTTCTGTCTGCCACCAGGTGTCCACCAGCGTGCACCTaGTGTCCCCCACCACCCTGTGAAGCCACTCCCAGGCCTCACAGT +
Preference number: 5 (lower is better)
Translates to: CHLFLSATRCPPACT*CPPPPCEATPRPHS
Trigger: ACTGTGAGGCCTGGGAGTGGCTTCACAGGGTGGTGGGGGACAGCAGGTGCACGCTGGTGGACACCTGGTGGCAGACAGAAACAGGTGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS GCA 90 bp TGCAGATGCCACCTGTTTCTGTCTGCCACCAGGTGTCCACCAGCGTaGACCTGCTGTCCCCCACCACCCTGTGAAGCCACTCCCAGGCCT +
Preference number: 5 (lower is better)
Translates to: CRCHLFLSATRCPPA*TCCPPPPCEATPRP
Trigger: AGGCCTGGGAGTGGCTTCACAGGGTGGTGGGGGACAGCAGGTGCACGCTGGTGGACACCTGGTGGCAGACAGAAACAGGTGGCATCTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS GCA 90 bp CGCCATGGCAGGGAGGATTTCCGCCCCTTCTTCCGAGGGCCGTGGTaGGATGCAGATGCCACCTGTTTCTGTCTGCCACCAGGTGTCCAC +
Preference number: 5 (lower is better)
Translates to: RHGREDFRPFFRGPW*DADATCFCLPPGVH
Trigger: GTGGACACCTGGTGGCAGACAGAAACAGGTGGCATCTGCATCGCACCACGGCCCTCGGAAGAAGGGGCGGAAATCCTCCCTGCCATGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS GCA 90 bp CCAACCTCAGGGGTACCTTCTGGGAAGGACAAGCCAGGGCTTGGGTaGCCGCCCATCCCAAGAGCCCCACAAGGTGCCAGCTCACTTAGC +
Preference number: 5 (lower is better)
Translates to: PTSGVPSGKDKPGLG*PPIPRAPQGASSLS
Trigger: GCTAAGTGAGCTGGCACCTTGTGGGGCTCTTGGGATGGGCGGGCACCCAAGCCCTGGCTTGTCCTTCCCAGAAGGTACCCCTGAGGTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000484396.1
ENST00000537502.5
CDS-3UTR CAA 90 bp CCTCAGTGGTTCTCACCGCCCCAACCACAGAGTGAAGGTCAGGCAGCGTTTGCCTGCCTCTTCAGCGTGTaGGCCAGGCGGCACGTGGTC +
Preference number: 5 (lower is better)
Translates to: PQWFSPPQPQSEGQAAFACLFSV*ARRHVV
Trigger: GACCACGTGCCGCCTGGCCAACACGCTGAAGAGGCA...GGCAAACGCTGCCTGACCTTCACTCTGTGGTTGGGGCGGTGAGAACCACTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CAA 90 bp CACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGTACTCAGTGGCCCAGTGGCACAGGCCAGCATaGCTGCCACAGCCAATGGGG +
Preference number: 5 (lower is better)
Translates to: HSPKRPAQPRPSGYSVAQWHRPA*LPQPMG
Trigger: CCCCATTGGCTGTGGCAGCAATGCTGGCCTGTGCCA...CTGGGCCACTGAGTACCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CAA 90 bp CAGGGGTACCTTCTGGGAAGGACAAGCCAGGGCTTGGGTGCCCGCCCATCCCAAACGCTGGTGGCACCATaGCAGAGAGGCCCATACACC +
Preference number: 5 (lower is better)
Translates to: QGYLLGRTSQGLGARPSQTLVAP*QRGPYT
Trigger: GGTGTATGGGCCTCTCTGCAATGGTGCCACCAGCGT...TTGGGATGGGCGGGCACCCAAGCCCTGGCTTGTCCTTCCCAGAAGGTACCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CAA 90 bp GGTTCTCACCGCCCCAACCACAGAGTGAAGGTCAGGCAGCGTTTGCCAGGATTTAGGGCCCCGGAGACGTaGCTGCCCTCCACGACGCTG +
Preference number: 5 (lower is better)
Translates to: GSHRPNHRVKVRQRLPGFRAPET*LPSTTL
Trigger: CAGCGTCGTGGAGGGCAGCAACGTCTCCGGGGCCCT...AAATCCTGGCAAACGCTGCCTGACCTTCACTCTGTGGTTGGGGCGGTGAGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CAA 90 bp TGGTTCTCACCGCCCCAACCACAGAGTGAAGGTCAGGCAGCGTTTGCCAGGATTAGGGCCCCGGAGACGTaGCTGCCCTCCACGACGCTG +
Preference number: 5 (lower is better)
Translates to: WFSPPQPQSEGQAAFARIRAPET*LPSTTL
Trigger: CAGCGTCGTGGAGGGCAGCAACGTCTCCGGGGCCCT...AATCCTGGCAAACGCTGCCTGACCTTCACTCTGTGGTTGGGGCGGTGAGAACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS TCA 90 bp AGCGGGACGTCCAGATCCCCCATGTGGACCTTGTTGTCTGTCCTGTaGGCCACCAGGACATGCTGCACGGTGGGGCAGTGCTTCACAGCC +
Preference number: 5 (lower is better)
Translates to: SGTSRSPMWTLLSVL*ATRTCCTVGQCFTA
Trigger: GGCTGTGAAGCACTGCCCCACCGTGCAGCATGTCCTGGTGGCTCACAGGACAGACAACAAGGTCCACATGGGGGATCTGGACGTCCCGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS GCA 90 bp CCACAGGTCAGATTCGTCCAAAGAGTCCCAGCGCAGCACACAGCCTaGACACTCCAGAGCACACTCTGGCACACACGCGTGGCGGCTGCA +
Preference number: 5 (lower is better)
Translates to: PQVRFVQRVPAQHTA*TLQSTLWHTRVAAA
Trigger: TGCAGCCGCCACGCGTGTGTGCCAGAGTGTGCTCTGGAGTGTGCAGGCTGTGTGCTGCGCTGGGACTCTTTGGACGAATCTGACCTGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS CCA 90 bp CATCGCCATGGCAGGGAGGATTTCCGCCCCTTCTTCCGAGGGCCGTaGTGCGATGCAGATGCCACCTGTTTCTGTCTGCCACCAGGTGTC +
Preference number: 5 (lower is better)
Translates to: HRHGREDFRPFFRGP*CDADATCFCLPPGV
Trigger: GACACCTGGTGGCAGACAGAAACAGGTGGCATCTGCATCGCACCACGGCCCTCGGAAGAAGGGGCGGAAATCCTCCCTGCCATGGCGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS CCA 90 bp GGGTGGTCGGCGATGGCGTCCTCAATCTCTGCGGTCCCCAGCCGGTaGCCACTGATGTTGATGACATCATCCATCCGCCCTGTGATCTGG +
Preference number: 5 (lower is better)
Translates to: GWSAMASSISAVPSR*PLMLMTSSIRPVIW
Trigger: CCAGATCACAGGGCGGATGGATGATGTCATCAACATCAGTGGCCACCGGCTGGGGACCGCAGAGATTGAGGACGCCATCGCCGACCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS CCA 90 bp CCAGTGGGGCCCGAGGATCCAGGGCAGAAGAATGCTGCTGGCCTATaGGCCACACGGCATCTGCAACCAGGGACTGTAGGTGATCCTCAC +
Preference number: 5 (lower is better)
Translates to: PVGPEDPGQKNAAGL*ATRHLQPGTVGDPH
Trigger: GTGAGGATCACCTACAGTCCCTGGTTGCAGATGCCGTGTGGCCCATAGGCCAGCAGCATTCTTCTGCCCTGGATCCTCGGGCCCCACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS CCA 90 bp AGCACACAGCCTGCACACTCCAGAGCACACTCTGGCACACACGCGTaGCGGCTGCAGAGCTGGCTTGAGTGCTATGACCAAGCCCGTGAG +
Preference number: 5 (lower is better)
Translates to: STQPAHSRAHSGTHA*RLQSWLECYDQARE
Trigger: CTCACGGGCTTGGTCATAGCACTCAAGCCAGCTCTGCAGCCGCCACGCGTGTGTGCCAGAGTGTGCTCTGGAGTGTGCAGGCTGTGTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS-3UTR CAA 90 bp ACCGCCAGCCCCTGCATGCCTAGCAGGGAGGTAAGCACCCACTGGCGTCGTGATCCCACCCCGGAGTCCTaGGTTGAAGGTGATAACCAC +
Preference number: 5 (lower is better)
Translates to: TASPCMPSREVSTHWRRDPTPES*VEGDNH
Trigger: GTGGTTATCACCTTCAACCAAGGACTCCGGGGTGGG...ATCACGACGCCAGTGGGTGCTTACCTCCCTGCTAGGCATGCAGGGGCTGGCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CAA 90 bp CAGGCAGATGGAGCTGGGCCCACCGTGGCGAGGGGCAGCTGCAGCAGCTTGGGTAAGGTTTTCATGCCTTaGTGCGCCCCTGAGAGTGAA +
Preference number: 5 (lower is better)
Translates to: QADGAGPTVARGSCSSLGKVFMP*CAPESE
Trigger: TTCACTCTCAGGGGCGCACAAAGGCATGAAAACCTT...ACCCAAGCTGCTGCAGCTGCCCCTCGCCACGGTGGGCCCAGCTCCATCTGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS CCA 90 bp GCGATGATGCTGGGGTCCTCCAAGGTGGTAGTGTCTCCCAGCTCCTaGGCCTCACTAGTGATGATCTTCCTCAGGAGCCGCCGCATGACC +
Preference number: 5 (lower is better)
Translates to: AMMLGSSKVVVSPSS*ASLVMIFLRSRRMT
Trigger: GGTCATGCGGCGGCTCCTGAGGAAGATCATCACTAGTGAGGCCCAGGAGCTGGGAGACACTACCACCTTGGAGGACCCCAGCATCATCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000484396.1
ENST00000537502.5
CDS CCA 90 bp GTGGCCCCAGGGAGTACTGGCTCAGCCACTGGACTCAGACATAGATaGGGCTTTCAAATCCCAGGACACGTCAGTGCCCTGTGGACCCCC +
Preference number: 5 (lower is better)
Translates to: VAPGSTGSATGLRHR*GFQIPGHVSALWTP
Trigger: GGGGGTCCACAGGGCACTGACGTGTCCTGGGATTTGAAAGCCCCATCTATGTCTGAGTCCAGTGGCTGAGCCAGTACTCCCTGGGGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS CCA 90 bp GGCAACACCAGACTTGCAATAGCTCCACACACGCAGAACGTGCCCTaGGCAGCAGCGTCCACAGCAGACCATGCCCCAACACCACCCCAA +
Preference number: 5 (lower is better)
Translates to: GNTRLAIAPHTQNVP*AAASTADHAPTPPQ
Trigger: TTGGGGTGGTGTTGGGGCATGGTCTGCTGTGGACGCTGCTGCCCAGGGCACGTTCTGCGTGTGTGGAGCTATTGCAAGTCTGGTGTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS-3UTR CAA 90 bp CAGACCGAACCGCTACTTAGCACACACTCAGTGCTCCCACGGGCAGCGTCCAGCAGGAACCAGCCGATCTaGCCAGTGCTGAAGTCGCAG +
Preference number: 5 (lower is better)
Translates to: QTEPLLSTHSVLPRAASSRNQPI*PVLKSQ
Trigger: CTGCGACTTCAGCACTGGCAAGATCGGCTGGTTCCT...GCTGGACGCTGCCCGTGGGAGCACTGAGTGTGTGCTAAGTAGCGGTTCGGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR CAA 90 bp TGGTTCTCACCGCCCCAACCACAGAGTGAAGGTCAGGCAGCGTTTGCCAGGATTTGCCTCTTCAGCGTGTaGGCCAGGCGGCACGTGGTC +
Preference number: 5 (lower is better)
Translates to: WFSPPQPQSEGQAAFARICLFSV*ARRHVV
Trigger: GACCACGTGCCGCCTGGCCAACACGCTGAAGAGGCA...AATCCTGGCAAACGCTGCCTGACCTTCACTCTGTGGTTGGGGCGGTGAGAACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CAA 90 bp TGGGCTTCACAGGTTCACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGGTATGGACGATGCCCTaGGGCATTCCGGTGCTCCCT +
Preference number: 5 (lower is better)
Translates to: WASQVHSPKRPAQPRPSGVWTMP*GIPVLP
Trigger: AGGGAGCACCGGAATGCCCAAGGGCATCGTCCATAC...CCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTGAACCTGTGAAGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CAA 90 bp CCTCAGTGGTTCTCACCGCCCCAACCACAGAGTGAAGGTCAGGCAGCGTTTGCCACAGCCGGACAGCCGTaGGGGCGCCATAGAACTGAT +
Preference number: 5 (lower is better)
Translates to: PQWFSPPQPQSEGQAAFATAGQP*GRHRTD
Trigger: ATCAGTTCTATGGCGCCCCAACGGCTGTCCGGCTGT...GGCAAACGCTGCCTGACCTTCACTCTGTGGTTGGGGCGGTGAGAACCACTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS TCA 90 bp GGACGATGCCCTTGGGCATTCCGGTGCTCCCTGAGGTGTACAGCATaGAGAGCATGTCCTCACTGCCCATGCTCTCTGGGGCGCAAACAG +
Preference number: 5 (lower is better)
Translates to: GRCPWAFRCSLRCTA*RACPHCPCSLGRKQ
Trigger: CTGTTTGCGCCCCAGAGAGCATGGGCAGTGAGGACATGCTCTTCATGCTGTACACCTCAGGGAGCACCGGAATGCCCAAGGGCATCGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS TCA 90 bp GCCTGCCTGGGTATGGACGATGCCCTTGGGCATTCCGGTGCTCCCTaGGGTGTACAGCATGAAGAGCATGTCCTCACTGCCCATGCTCTC +
Preference number: 5 (lower is better)
Translates to: ACLGMDDALGHSGAP*GVQHEEHVLTAHAL
Trigger: GAGAGCATGGGCAGTGAGGACATGCTCTTCATGCTGTACACCTCAGGGAGCACCGGAATGCCCAAGGGCATCGTCCATACCCAGGCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS TCA 90 bp GCCAGAGGCTGCCACCCTGGACAACACAGACAGCTGAGAGGCAGCTaGGAGTTCTGCTGGGCAGCACGGGCCAGCCCACATTATAGCATA +
Preference number: 5 (lower is better)
Translates to: ARGCHPGQHRQLRGS*EFCWAARASPHYSI
Trigger: TATGCTATAATGTGGGCTGGCCCGTGCTGCCCAGCAGAACTCTCAGCTGCCTCTCAGCTGTCTGTGTTGTCCAGGGTGGCAGCCTCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS GCA 90 bp TGTTCCTCGAGTCGGCCTGTTTTGGTTTCAGTTTGCACGCTCTCCTaGAAGCCCCGACAGCTTCTTCGAGCTGCCAGAGGCACGTGCGGC +
Preference number: 5 (lower is better)
Translates to: CSSSRPVLVSVCTLS*KPRQLLRAARGTCG
Trigger: GCCGCACGTGCCTCTGGCAGCTCGAAGAAGCTGTCGGGGCTTGCAGGAGAGCGTGCAAACTGAAACCAAAACAGGCCGACTCGAGGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS GCA 90 bp AGCCTGCACACTCCAGAGCACACTCTGGCACACACGCGTGGCGGCTaGAGAGCTGGCTTGAGTGCTATGACCAAGCCCGTGAGGATACAT +
Preference number: 5 (lower is better)
Translates to: SLHTPEHTLAHTRGG*RAGLSAMTKPVRIH
Trigger: ATGTATCCTCACGGGCTTGGTCATAGCACTCAAGCCAGCTCTGCAGCCGCCACGCGTGTGTGCCAGAGTGTGCTCTGGAGTGTGCAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS TCA 90 bp AGACATTTAACTGGCCTCCCAGGAACCAGCCGATCTTGCCAGTGCTaGAGTCGCAGTCCCAGACGGTGTGGTAGGGGGTGTCCCACACGA +
Preference number: 5 (lower is better)
Translates to: RHLTGLPGTSRSCQC*SRSPRRCGRGCPTR
Trigger: TCGTGTGGGACACCCCCTACCACACCGTCTGGGACTGCGACTTCAGCACTGGCAAGATCGGCTGGTTCCTGGGAGGCCAGTTAAATGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000376726.3
ENST00000432802.6
CDS TCA 90 bp CATCCCGGTGCCATCCCTGATAGCCTGCCCGTCCCCACTGGCCTGTaGGGTGCTCTGTCTCTCCCTCGAAGCTTCTATATATGTGTGGCT +
Preference number: 5 (lower is better)
Translates to: HPGAIPDSLPVPTGL*GALSLPRSFYICVA
Trigger: AGCCACACATATATAGAAGCTTCGAGGGAGAGACAGAGCACCTCACAGGCCAGTGGGGACGGGCAGGCTATCAGGGATGGCACCGGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS GCA 90 bp GTCCCACCCGGATGTTCCTCGAGTCGGCCTGTTTTGGTTTCAGTTTaGACGCTCTCCTGCAAGCCCCGACAGCTTCTTCGAGCTGCCAGA +
Preference number: 5 (lower is better)
Translates to: VPPGCSSSRPVLVSV*TLSCKPRQLLRAAR
Trigger: TCTGGCAGCTCGAAGAAGCTGTCGGGGCTTGCAGGAGAGCGTGCAAACTGAAACCAAAACAGGCCGACTCGAGGAACATCCGGGTGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS GCA 90 bp TGTCCATATAAGGAGTTGCTCATCCCGGTGCCATCCCTGATAGCCTaGCCGTCCCCACTGGCCTGTGAGGTGCTCTGTCTCTCCCTCGAA +
Preference number: 5 (lower is better)
Translates to: CPYKELLIPVPSLIA*PSPLACEVLCLSLE
Trigger: TTCGAGGGAGAGACAGAGCACCTCACAGGCCAGTGGGGACGGGCAGGCTATCAGGGATGGCACCGGGATGAGCAACTCCTTATATGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS CCA 90 bp GTGAGTCTGCGGTCCCACCCGGATGTTCCTCGAGTCGGCCTGTTTTaGTTTCAGTTTGCACGCTCTCCTGCAAGCCCCGACAGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: VSLRSHPDVPRVGLF*FQFARSPASPDSFF
Trigger: GAAGAAGCTGTCGGGGCTTGCAGGAGAGCGTGCAAACTGAAACCAAAACAGGCCGACTCGAGGAACATCCGGGTGGGACCGCAGACTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS CCA 90 bp GTGGTCTCCAGTAGTTCCCGGCCATGCGGTGCGAAGTGGAGGAAGTaGAAGCGATCCCAAGGTTGTCTTTCCTTTCGGCGCCTCATCCCT +
Preference number: 5 (lower is better)
Translates to: VVSSSSRPCGAKWRK*KRSQGCLSFRRLIP
Trigger: AGGGATGAGGCGCCGAAAGGAAAGACAACCTTGGGATCGCTTCCACTTCCTCCACTTCGCACCGCATGGCCGGGAACTACTGGAGACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537502.5
CDS-3UTR CAA 90 bp CAAAAGACCACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGTGCCTCTTCAGCGTGTaGGCCAGGCGGCACGTGGTC +
Preference number: 5 (lower is better)
Translates to: QKTTTQYLCTLQPTPPPGCLFSV*ARRHVV
Trigger: GACCACGTGCCGCCTGGCCAACACGCTGAAGAGGCA...CCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTGGTCTTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CAA 90 bp CCCAACCACAGAGTGAAGGTCAGGCAGCGTTTGCCAGGATTTGGCTCTGACCAATGGCACAGGCCAGCATaGCTGCCACAGCCAATGGGG +
Preference number: 5 (lower is better)
Translates to: PNHRVKVRQRLPGFGSDQWHRPA*LPQPMG
Trigger: CCCCATTGGCTGTGGCAGCAATGCTGGCCTGTGCCA...TTGGTCAGAGCCAAATCCTGGCAAACGCTGCCTGACCTTCACTCTGTGGTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CAA 90 bp TGGTTCTCACCGCCCCAACCACAGAGTGAAGGTCAGGCAGCGTTTGCCAGGATTACAGCCGGACAGCCGTaGGGGCGCCATAGAACTGAT +
Preference number: 5 (lower is better)
Translates to: WFSPPQPQSEGQAAFARITAGQP*GRHRTD
Trigger: ATCAGTTCTATGGCGCCCCAACGGCTGTCCGGCTGT...AATCCTGGCAAACGCTGCCTGACCTTCACTCTGTGGTTGGGGCGGTGAGAACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CAA 90 bp GGTTCTCACCGCCCCAACCACAGAGTGAAGGTCAGGCAGCGTTTGCCAGGATTTAGGAACCAGCCGATCTaGCCAGTGCTGAAGTCGCAG +
Preference number: 5 (lower is better)
Translates to: GSHRPNHRVKVRQRLPGFRNQPI*PVLKSQ
Trigger: CTGCGACTTCAGCACTGGCAAGATCGGCTGGTTCCT...AAATCCTGGCAAACGCTGCCTGACCTTCACTCTGTGGTTGGGGCGGTGAGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000432802.6
CDS-3UTR CAA 90 bp ACCACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACGTATGGACGATGCCCTaGGGCATTCCGGTGCTCCCT +
Preference number: 5 (lower is better)
Translates to: TTTQYLCTLQPTPPPGLHVWTMP*GIPVLP
Trigger: AGGGAGCACCGGAATGCCCAAGGGCATCGTCCATAC...GTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CAA 90 bp GTCTCATCATTGGACCTCAGTGGTTCTCACCGCCCCAACCACAGAGTGAAGGTCACGCTGGTGGCACCATaGCAGAGAGGCCCATACACC +
Preference number: 5 (lower is better)
Translates to: VSSLDLSGSHRPNHRVKVTLVAP*QRGPYT
Trigger: GGTGTATGGGCCTCTCTGCAATGGTGCCACCAGCGT...GACCTTCACTCTGTGGTTGGGGCGGTGAGAACCACTGAGGTCCAATGATGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CAA 90 bp CTCCAAGTCTCATCATTGGACCTCAGTGGTTCTCACCGCCCCAACCACAGAGTGACAGCCGGACAGCCGTaGGGGCGCCATAGAACTGAT +
Preference number: 5 (lower is better)
Translates to: LQVSSLDLSGSHRPNHRVTAGQP*GRHRTD
Trigger: ATCAGTTCTATGGCGCCCCAACGGCTGTCCGGCTGT...CACTCTGTGGTTGGGGCGGTGAGAACCACTGAGGTCCAATGATGAGACTTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CAA 90 bp GTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACAGGTTCACTCACCCAAGAAGGTCAGGCAGCGTTaGCCAGGATTTGGCTCTGAC +
Preference number: 5 (lower is better)
Translates to: VYPAANTTSWASQVHSPKKVRQR*PGFGSD
Trigger: GTCAGAGCCAAATCCTGGCAAACGCTGCCTGACCTT...CTTGGGTGAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CAA 90 bp CAGACCGAACCGCTACTTAGCACACACTCAGTGCTCCCACGGGCAGCGTCCAGCTGTTTTGGTTTCAGTTaGCACGCTCTCCTGCAAGCC +
Preference number: 5 (lower is better)
Translates to: QTEPLLSTHSVLPRAASSCFGFS*HALLQA
Trigger: GGCTTGCAGGAGAGCGTGCAAACTGAAACCAAAACA...GCTGGACGCTGCCCGTGGGAGCACTGAGTGTGTGCTAAGTAGCGGTTCGGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS GCA 90 bp AGCAGCCTGCTTGTCCTTGCACTTCTGGTAGACACTCAGGATCTCTaGGATGATGCTGGGGTCCTCCAAGGTGGTAGTGTCTCCCAGCTC +
Preference number: 5 (lower is better)
Translates to: SSLLVLALLVDTQDL*DDAGVLQGGSVSQL
Trigger: GAGCTGGGAGACACTACCACCTTGGAGGACCCCAGCATCATCGCAGAGATCCTGAGTGTCTACCAGAAGTGCAAGGACAAGCAGGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000484396.1
ENST00000537502.5
CDS CCA 90 bp GCTCCACAGATGTTCCAGGTGAGTGCACATGTGTGGCTGAGAGCTTaGCATCTCAGCTCTAATGCTGACTGGCTGCGTGTGACCTGGGAC +
Preference number: 5 (lower is better)
Translates to: APQMFQVSAHVWLRA*HLSSNADWLRVTWD
Trigger: GTCCCAGGTCACACGCAGCCAGTCAGCATTAGAGCTGAGATGCCAAGCTCTCAGCCACACATGTGCACTCACCTGGAACATCTGTGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS-3UTR CAA 90 bp AGACCACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCAGGAACCAGCCGATCTaGCCAGTGCTGAAGTCGCAG +
Preference number: 5 (lower is better)
Translates to: RPPLSICVPCSQHHLLGFRNQPI*PVLKSQ
Trigger: CTGCGACTTCAGCACTGGCAAGATCGGCTGGTTCCT...GAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTGGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000432802.6
CDS-3UTR CAA 90 bp TCACAGGTTCACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGTACTCACCCCGGAGTCCTTGGTaGAAGGTGATAACCACCTTG +
Preference number: 5 (lower is better)
Translates to: SQVHSPKRPAQPRPSGYSPRSPW*KVITTL
Trigger: CAAGGTGGTTATCACCTTCAACCAAGGACTCCGGGG...TGAGTACCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTGAACCTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CAA 90 bp AAGACCACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTGTATGGACGATGCCCTaGGGCATTCCGGTGCTCCCT +
Preference number: 5 (lower is better)
Translates to: KTTTQYLCTLQPTPPPGLVWTMP*GIPVLP
Trigger: AGGGAGCACCGGAATGCCCAAGGGCATCGTCCATAC...AAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTGGTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CAA 90 bp AGACTGGATCCAGACCTCCAAGTCTCATCATTGGACCTCAGTGGTTCTCACCGCTCCCAGGCCTCACAGTaGATGGGCTCTCCCACTGAC +
Preference number: 5 (lower is better)
Translates to: RLDPDLQVSSLDLSGSHRSQASQ*MGSPTD
Trigger: GTCAGTGGGAGAGCCCATCAACTGTGAGGCCTGGGA...GCGGTGAGAACCACTGAGGTCCAATGATGAGACTTGGAGGTCTGGATCCAGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CAA 90 bp GGTTCTCACCGCCCCAACCACAGAGTGAAGGTCAGGCAGCGTTTGCCAGGATTTCGGTGGCCACTGATGTaGATGACATCATCCATCCGC +
Preference number: 5 (lower is better)
Translates to: GSHRPNHRVKVRQRLPGFRWPLM*MTSSIR
Trigger: GCGGATGGATGATGTCATCAACATCAGTGGCCACCG...AAATCCTGGCAAACGCTGCCTGACCTTCACTCTGTGGTTGGGGCGGTGAGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CAA 90 bp CTGGATCCAGACCTCCAAGTCTCATCATTGGACCTCAGTGGTTCTCACCGCCCCTCAGGCACAGCATATTaGGCGATCTTGGTGGCCACC +
Preference number: 5 (lower is better)
Translates to: LDPDLQVSSLDLSGSHRPSGTAY*AILVAT
Trigger: GGTGGCCACCAAGATCGCCAAATATGCTGTGCCTGA...GGGGCGGTGAGAACCACTGAGGTCCAATGATGAGACTTGGAGGTCTGGATCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CAA 90 bp ATGGAGAGAAACTGGCCCTTCGGGGAGTGCCATGGCTGGGCCCTCCCTGCCGGAAGAGTAATAAGTACTTaGCCAGGGCCATTTCAGTGT +
Preference number: 5 (lower is better)
Translates to: MERNWPFGECHGWALPAGRVIST*PGPFQC
Trigger: ACACTGAAATGGCCCTGGCAAAGTACTTATTACTCT...TCCGGCAGGGAGGGCCCAGCCATGGCACTCCCCGAAGGGCCAGTTTCTCTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR CAA 90 bp AGACCACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCCCGCTCGCAGCGTGTTaGCATAGCTCTCCTCTGTTC +
Preference number: 5 (lower is better)
Translates to: RPPLSICVPCSQHHLLGFPLAAC*HSSPLF
Trigger: GAACAGAGGAGAGCTATGCAAACACGCTGCGAGCGG...GAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTGGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537502.5
CDS CCA 90 bp GGACCTTGTTGTCTGTCCTGTGAGCCACCAGGACATGCTGCACGGTaGGGCAGTGCTTCACAGCCTCATCCACTATTTTCTTCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: GPCCLSCEPPGHAAR*GSASQPHPLFSSAP
Trigger: TGGAGCTGAAGAAAATAGTGGATGAGGCTGTGAAGCACTGCCCCACCGTGCAGCATGTCCTGGTGGCTCACAGGACAGACAACAAGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS CCA 90 bp GACCAGCATTGGGATAAACTGGGGTGCTCTCAAAAAGGACGCTGGTaGCACCATTGCAGAGAGGCCCATACACCACGTAGCTGTGTCCTG +
Preference number: 5 (lower is better)
Translates to: DQHWDKLGCSQKGRW*HHCREAHTPRSCVL
Trigger: CAGGACACAGCTACGTGGTGTATGGGCCTCTCTGCAATGGTGCCACCAGCGTCCTTTTTGAGAGCACCCCAGTTTATCCCAATGCTGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS CCA 90 bp ACCGACCAGCATTGGGATAAACTGGGGTGCTCTCAAAAAGGACGCTaGTGGCACCATTGCAGAGAGGCCCATACACCACGTAGCTGTGTC +
Preference number: 5 (lower is better)
Translates to: TDQHWDKLGCSQKGR*WHHCREAHTPRSCV
Trigger: GACACAGCTACGTGGTGTATGGGCCTCTCTGCAATGGTGCCACCAGCGTCCTTTTTGAGAGCACCCCAGTTTATCCCAATGCTGGTCGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS CCA 90 bp ATTCTAGTCCCTCATTCTGCATTCCCCCAGCATGTCGCTGTGCAGTaGGAACCACAGGTCAGATTCGTCCAAAGAGTCCCAGCGCAGCAC +
Preference number: 5 (lower is better)
Translates to: ILVPHSAFPQHVAVQ*EPQVRFVQRVPAQH
Trigger: GTGCTGCGCTGGGACTCTTTGGACGAATCTGACCTGTGGTTCCCACTGCACAGCGACATGCTGGGGGAATGCAGAATGAGGGACTAGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS CCA 90 bp ATGAGAAGGTGCACAGATGCACAGCAAATGGGCACCACCAGCCTTTaGGGGTGTGTGTGCAACATGGTGCCATGGGCCAGGGTAGCTATT +
Preference number: 5 (lower is better)
Translates to: MRRCTDAQQMGTTSL*GCVCNMVPWARVAI
Trigger: AATAGCTACCCTGGCCCATGGCACCATGTTGCACACACACCCCCAAAGGCTGGTGGTGCCCATTTGCTGTGCATCTGTGCACCTTCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS-3UTR CAA 90 bp CAAAGAGAGACTGGATCCAGACCTCCAAGTCTCATCATTGGACCTCAGTGGTTCTGGCACAGGCCAGCATaGCTGCCACAGCCAATGGGG +
Preference number: 5 (lower is better)
Translates to: QRETGSRPPSLIIGPQWFWHRPA*LPQPMG
Trigger: CCCCATTGGCTGTGGCAGCAATGCTGGCCTGTGCCA...GAACCACTGAGGTCCAATGATGAGACTTGGAGGTCTGGATCCAGTCTCTCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CAA 90 bp CTGCAGCCAACACCACCTCCTGGGCTTCACAGGTTCACTCACCCAAGAGGCCAGATAACCACCTTGCACTaGGCATCATTGATCCTCCCA +
Preference number: 5 (lower is better)
Translates to: LQPTPPPGLHRFTHPRGQITTLH*ASLILP
Trigger: TGGGAGGATCAATGATGCCAAGTGCAAGGTGGTTAT...CTGGCCTCTTGGGTGAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CAA 90 bp AGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACAGGTTCACTCCCCACCCCGGAGTCCTaGGTTGAAGGTGATAACCAC +
Preference number: 5 (lower is better)
Translates to: SICVPCSQHHLLGFTGSLPTPES*VEGDNH
Trigger: GTGGTTATCACCTTCAACCAAGGACTCCGGGGTGGG...GAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CAA 90 bp GTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACAGGTTCACTCACCCACCCCGGAGTCCTaGGTTGAAGGTGATAACCAC +
Preference number: 5 (lower is better)
Translates to: VFVYPAANTTSWASQVHSPTPES*VEGDNH
Trigger: GTGGTTATCACCTTCAACCAAGGACTCCGGGGTGGG...TGAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CAA 90 bp ATGCCCGGGACCATGTCCAGGTTCCTCTCAGCAACATGGAAAGCTAAGCCATTTACGCTGGTGGCACCATaGCAGAGAGGCCCATACACC +
Preference number: 5 (lower is better)
Translates to: MPGTMSRFLSATWKAKPFTLVAP*QRGPYT
Trigger: GGTGTATGGGCCTCTCTGCAATGGTGCCACCAGCGT...AAATGGCTTAGCTTTCCATGTTGCTGAGAGGAACCTGGACATGGTCCCGGGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CAA 90 bp CACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGTACTCAGTGGCCCAGACTATTTGGAGTATGTaGCCTCTCCTATCAAGAGGC +
Preference number: 5 (lower is better)
Translates to: HSPKRPAQPRPSGYSVAQTIWSM*PLLSRG
Trigger: GCCTCTTGATAGGAGAGGCAACATACTCCAAATAGT...CTGGGCCACTGAGTACCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CAA 90 bp ACCACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACAAGGTCAGGCAGCGTTaGCCAGGATTTGGCTCTGAC +
Preference number: 5 (lower is better)
Translates to: TTTQYLCTLQPTPPPGLHKVRQR*PGFGSD
Trigger: GTCAGAGCCAAATCCTGGCAAACGCTGCCTGACCTT...GTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS TCA 90 bp GATCTTGGTGGCCACCATGGACTTGAGCTCCTGCACCACCACATCTaGGTCACCCGCACTATCTTTCACCACAATGAAGGCAAAGGCAGC +
Preference number: 5 (lower is better)
Translates to: DLGGHHGLELLHHHI*VTRTIFHHNEGKGS
Trigger: GCTGCCTTTGCCTTCATTGTGGTGAAAGATAGTGCGGGTGACTCAGATGTGGTGGTGCAGGAGCTCAAGTCCATGGTGGCCACCAAGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000484396.1
ENST00000537502.5
CDS GCA 90 bp GAAACAAAGCGTGGCCTTGGTAAAGGCCATTCTAGTCCCTCATTCTaGATTCCCCCAGCATGTCGCTGTGCAGTGGGAACCACAGGTCAG +
Preference number: 5 (lower is better)
Translates to: ETKRGLGKGHSSPSF*IPPACRCAVGTTGQ
Trigger: CTGACCTGTGGTTCCCACTGCACAGCGACATGCTGGGGGAATGCAGAATGAGGGACTAGAATGGCCTTTACCAAGGCCACGCTTTGTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS GCA 90 bp CTCCCTCGAAGCTTCTATATATGTGTGGCTCTCCTACTGCTCATCTaGCCCAGCCCCATGCCACCTTCACCCATTCTTCCCTGGCATGTA +
Preference number: 5 (lower is better)
Translates to: LPRSFYICVALLLLI*PSPMPPSPILPWHV
Trigger: TACATGCCAGGGAAGAATGGGTGAAGGTGGCATGGGGCTGGGGCAGATGAGCAGTAGGAGAGCCACACATATATAGAAGCTTCGAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS CCA 90 bp TCCTGTAATCCAACCGATGTCGGCCACACAGCCAAAGATGTCACCTaGCTGGTGGTCAAACACAAGCTTGTGAGTCAGGGCGGCATAGAG +
Preference number: 5 (lower is better)
Translates to: SCNPTDVGHTAKDVT*LVVKHKLVSQGGIE
Trigger: CTCTATGCCGCCCTGACTCACAAGCTTGTGTTTGACCACCAGCCAGGTGACATCTTTGGCTGTGTGGCCGACATCGGTTGGATTACAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CAA 90 bp CAAAAGACCACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCCCCGGAGTCCTTGGTaGAAGGTGATAACCACCTTG +
Preference number: 5 (lower is better)
Translates to: QKTTTQYLCTLQPTPPPGPRSPW*KVITTL
Trigger: CAAGGTGGTTATCACCTTCAACCAAGGACTCCGGGG...CCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTGGTCTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CAA 90 bp CCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACAGGTGCATATTTGGCGATCTaGGTGGCCACCATGGACTTG +
Preference number: 5 (lower is better)
Translates to: PLSICVPCSQHHLLGFTGAYLAI*VATMDL
Trigger: CAAGTCCATGGTGGCCACCAAGATCGCCAAATATGC...ACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS TCA 90 bp ATTTCAGCAACAGCCGGACAGCCGTTGGGGCGCCATAGAACTGATTaGTCTTCAACCTCTCTACTGTCTCCCAGTACCGACCAGCATTGG +
Preference number: 5 (lower is better)
Translates to: ISATAGQPLGRHRTD*SSTSLLSPSTDQHW
Trigger: CCAATGCTGGTCGGTACTGGGAGACAGTAGAGAGGTTGAAGATCAATCAGTTCTATGGCGCCCCAACGGCTGTCCGGCTGTTGCTGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS TCA 90 bp CATCAGGCACAGCATATTTGGCGATCTTGGTGGCCACCATGGACTTaGGCTCCTGCACCACCACATCTGAGTCACCCGCACTATCTTTCA +
Preference number: 5 (lower is better)
Translates to: HQAQHIWRSWWPPWT*APAPPHLSHPHYLS
Trigger: TGAAAGATAGTGCGGGTGACTCAGATGTGGTGGTGCAGGAGCTCAAGTCCATGGTGGCCACCAAGATCGCCAAATATGCTGTGCCTGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000484396.1
ENST00000537502.5
CDS GCA 90 bp AACCACCTTGCACTTGGCATCATTGATCCTCCCAGCCAAGGACTCTaGACTGAAGCCAGCAAAGATGACTGTGTGGACAGCTCCGATCCT +
Preference number: 5 (lower is better)
Translates to: NHLALGIIDPPSQGL*TEASKDDCVDSSDP
Trigger: AGGATCGGAGCTGTCCACACAGTCATCTTTGCTGGCTTCAGTGCAGAGTCCTTGGCTGGGAGGATCAATGATGCCAAGTGCAAGGTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS GCA 90 bp GTGAAGCCTTTCCTGACTCCACCCATGAATCTAGTTTATGGCACATaGTATGTGGGAACAGCTGTCAGTCCCCCTGCTGCCACCCCACTA +
Preference number: 5 (lower is better)
Translates to: VKPFLTPPMNLVYGT*YVGTAVSPPAATPL
Trigger: TAGTGGGGTGGCAGCAGGGGGACTGACAGCTGTTCCCACATAGCATGTGCCATAAACTAGATTCATGGGTGGAGTCAGGAAAGGCTTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS CCA 90 bp TCCACTATTTTCTTCAGCTCCACCACGCGCCCACCCCGGAGTCCTTaGTTGAAGGTGATAACCACCTTGCACTTGGCATCATTGATCCTC +
Preference number: 5 (lower is better)
Translates to: STIFFSSTTRPPRSP*LKVITTLHLASLIL
Trigger: GAGGATCAATGATGCCAAGTGCAAGGTGGTTATCACCTTCAACCAAGGACTCCGGGGTGGGCGCGTGGTGGAGCTGAAGAAAATAGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS CCA 90 bp CTTCACCCAGGCATCACCGTATTTCAGCAACAGCCGGACAGCCGTTaGGGCGCCATAGAACTGATTGATCTTCAACCTCTCTACTGTCTC +
Preference number: 5 (lower is better)
Translates to: LHPGITVFQQQPDSR*GAIELIDLQPLYCL
Trigger: GAGACAGTAGAGAGGTTGAAGATCAATCAGTTCTATGGCGCCCCAACGGCTGTCCGGCTGTTGCTGAAATACGGTGATGCCTGGGTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS CCA 90 bp CTGCTCTGTGAAGCCTTTCCTGACTCCACCCATGAATCTAGTTTATaGCACATGCTATGTGGGAACAGCTGTCAGTCCCCCTGCTGCCAC +
Preference number: 5 (lower is better)
Translates to: LLCEAFPDSTHESSL*HMLCGNSCQSPCCH
Trigger: GTGGCAGCAGGGGGACTGACAGCTGTTCCCACATAGCATGTGCCATAAACTAGATTCATGGGTGGAGTCAGGAAAGGCTTCACAGAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS CCA 90 bp ATGGGCACCACCAGCCTTTGGGGGTGTGTGTGCAACATGGTGCCATaGGCCAGGGTAGCTATTTCAGTTCAATTAAATCAGCAGCTCCCT +
Preference number: 5 (lower is better)
Translates to: MGTTSLWGCVCNMVP*ARVAISVQLNQQLP
Trigger: AGGGAGCTGCTGATTTAATTGAACTGAAATAGCTACCCTGGCCCATGGCACCATGTTGCACACACACCCCCAAAGGCTGGTGGTGCCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS CCA 90 bp GCGATTCTAACAGCTCCACAGATGTTCCAGGTGAGTGCACATGTGTaGCTGAGAGCTTGGCATCTCAGCTCTAATGCTGACTGGCTGCGT +
Preference number: 5 (lower is better)
Translates to: AILTAPQMFQVSAHV*LRAWHLSSNADWLR
Trigger: ACGCAGCCAGTCAGCATTAGAGCTGAGATGCCAAGCTCTCAGCCACACATGTGCACTCACCTGGAACATCTGTGGAGCTGTTAGAATCGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS-3UTR CAA 90 bp TCAAGTTCCTTCTCAGAAGGGGCTTTGTTCGCAGGCAGATGGAGCTGGGCCCACTGCTGGTCCAAGCAGTaGACAGAGACATTTAACTGG +
Preference number: 5 (lower is better)
Translates to: SSSFSEGALFAGRWSWAHCWSKQ*TETFNW
Trigger: CCAGTTAAATGTCTCTGTCAACTGCTTGGACCAGCA...GTGGGCCCAGCTCCATCTGCCTGCGAACAAAGCCCCTTCTGAGAAGGAACTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR CAA 90 bp AACAAAGAGAGACTGGATCCAGACCTCCAAGTCTCATCATTGGACCTCAGTGGTTCCCAGGCCTCACAGTaGATGGGCTCTCCCACTGAC +
Preference number: 5 (lower is better)
Translates to: NKERLDPDLQVSSLDLSGSQASQ*MGSPTD
Trigger: GTCAGTGGGAGAGCCCATCAACTGTGAGGCCTGGGA...ACCACTGAGGTCCAATGATGAGACTTGGAGGTCTGGATCCAGTCTCTCTTTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CAA 90 bp GAGAGACTGGATCCAGACCTCCAAGTCTCATCATTGGACCTCAGTGGTTCTCACCGGTGGCCACTGATGTaGATGACATCATCCATCCGC +
Preference number: 5 (lower is better)
Translates to: ERLDPDLQVSSLDLSGSHRWPLM*MTSSIR
Trigger: GCGGATGGATGATGTCATCAACATCAGTGGCCACCG...GTGAGAACCACTGAGGTCCAATGATGAGACTTGGAGGTCTGGATCCAGTCTCTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CAA 90 bp TCAAGAGGCATCTGGGGGCACAAAAATCTTTCTGGATCACAGCTTGAAGAAACAAGGACAAGCCAGGGCTaGGGTGCCCGCCCATCCCAA +
Preference number: 5 (lower is better)
Translates to: SRGIWGHKNLSGSQLEETRTSQG*GARPSQ
Trigger: TTGGGATGGGCGGGCACCCAAGCCCTGGCTTGTCCT...TGTTTCTTCAAGCTGTGATCCAGAAAGATTTTTGTGCCCCCAGATGCCTCTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CAA 90 bp ACCACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACAAAGATGCCGGAGGCTaGGAAGTTCTCAAGGGAACT +
Preference number: 5 (lower is better)
Translates to: TTTQYLCTLQPTPPPGLHKDAGG*EVLKGT
Trigger: AGTTCCCTTGAGAACTTCCAAGCCTCCGGCATCTTT...GTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CAA 90 bp GCCATGTCGCATAGCCTCTCCATGGGTGACACTCCTGGGACCTCCAATGGATGGACTATTTGGAGTATGTaGCCTCTCCTATCAAGAGGC +
Preference number: 5 (lower is better)
Translates to: AMSHSLSMGDTPGTSNGWTIWSM*PLLSRG
Trigger: GCCTCTTGATAGGAGAGGCAACATACTCCAAATAGT...CCATCCATTGGAGGTCCCAGGAGTGTCACCCATGGAGAGGCTATGCGACATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS GCA 90 bp ACAGCATATTTGGCGATCTTGGTGGCCACCATGGACTTGAGCTCCTaGACCACCACATCTGAGTCACCCGCACTATCTTTCACCACAATG +
Preference number: 5 (lower is better)
Translates to: TAYLAILVATMDLSS*TTTSESPALSFTTM
Trigger: CATTGTGGTGAAAGATAGTGCGGGTGACTCAGATGTGGTGGTGCAGGAGCTCAAGTCCATGGTGGCCACCAAGATCGCCAAATATGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000484396.1
ENST00000537502.5
CDS GCA 90 bp ACAGATGCACAGCAAATGGGCACCACCAGCCTTTGGGGGTGTGTGTaGAACATGGTGCCATGGGCCAGGGTAGCTATTTCAGTTCAATTA +
Preference number: 5 (lower is better)
Translates to: TDAQQMGTTSLWGCV*NMVPWARVAISVQL
Trigger: TAATTGAACTGAAATAGCTACCCTGGCCCATGGCACCATGTTGCACACACACCCCCAAAGGCTGGTGGTGCCCATTTGCTGTGCATCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS-3UTR CAA 90 bp CCCCCATGCCCAGGGCACAGCTTTGTTGCTAAGCCTGTAACAAAAGACCACCACATAACCACCTTGCACTaGGCATCATTGATCCTCCCA +
Preference number: 5 (lower is better)
Translates to: PPCPGHSFVAKPVTKDHHITTLH*ASLILP
Trigger: TGGGAGGATCAATGATGCCAAGTGCAAGGTGGTTAT...GTGGTGGTCTTTTGTTACAGGCTTAGCAACAAAGCTGTGCCCTGGGCATGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CAA 90 bp TCACAGGTTCACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGTACTCAAAGGTGATAACCACCTaGCACTTGGCATCATTGATC +
Preference number: 5 (lower is better)
Translates to: SQVHSPKRPAQPRPSGYSKVITT*HLASLI
Trigger: GATCAATGATGCCAAGTGCAAGGTGGTTATCACCTT...TGAGTACCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTGAACCTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CAA 90 bp ACATTAAAACAAAGAGAGACTGGATCCAGACCTCCAAGTCTCATCATTGGACCTAGGACAAGCCAGGGCTaGGGTGCCCGCCCATCCCAA +
Preference number: 5 (lower is better)
Translates to: TLKQRETGSRPPSLIIGPRTSQG*GARPSQ
Trigger: TTGGGATGGGCGGGCACCCAAGCCCTGGCTTGTCCT...AGGTCCAATGATGAGACTTGGAGGTCTGGATCCAGTCTCTCTTTGTTTTAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CAA 90 bp ACAGGTTCACTCACCCAAGAGGCCAGCACAACCACGACCGAGTGGGTACTCAGTGAAGAACCCAACTATTaGGAGTATGTTGCCTCTCCT +
Preference number: 5 (lower is better)
Translates to: TGSLTQEASTTTTEWVLSEEPNY*EYVASP
Trigger: AGGAGAGGCAACATACTCCAAATAGTTGGGTTCTTC...ACTGAGTACCCACTCGGTCGTGGTTGTGCTGGCCTCTTGGGTGAGTGAACCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CAA 90 bp GTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACAGGTTCACTCACTCCAAGTCTCATCATaGGACCTCAGTGGTTCTCAC +
Preference number: 5 (lower is better)
Translates to: VFVYPAANTTSWASQVHSLQVSS*DLSGSH
Trigger: GTGAGAACCACTGAGGTCCAATGATGAGACTTGGAG...TGAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CAA 90 bp AGACTGGATCCAGACCTCCAAGTCTCATCATTGGACCTCAGTGGTTCTCACCGCACCACCACTCAGTATTaGTGTACCCTGCAGCCAACA +
Preference number: 5 (lower is better)
Translates to: RLDPDLQVSSLDLSGSHRTTTQY*CTLQPT
Trigger: TGTTGGCTGCAGGGTACACAAATACTGAGTGGTGGT...GCGGTGAGAACCACTGAGGTCCAATGATGAGACTTGGAGGTCTGGATCCAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CAA 90 bp CTTTATTTGAACTCCCTCCCCTACAGATCATTCAGATGCCCGGGACCATGTCCAGAAGCGATCCCAAGGTaGTCTTTCCTTTCGGCGCCT +
Preference number: 5 (lower is better)
Translates to: LYLNSLPYRSFRCPGPCPEAIPR*SFLSAP
Trigger: AGGCGCCGAAAGGAAAGACAACCTTGGGATCGCTTC...TGGACATGGTCCCGGGCATCTGAATGATCTGTAGGGGAGGGAGTTCAAATAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537502.5
CDS TCA 90 bp CTGCAGAGCTGGCTTGAGTGCTATGACCAAGCCCGTGAGGATACATaGGGCTGGACATTTTCTCATAAACTCTCTGTAATGGGGCTGGAC +
Preference number: 5 (lower is better)
Translates to: LQSWLECYDQAREDT*GWTFSHKLSVMGLD
Trigger: GTCCAGCCCCATTACAGAGAGTTTATGAGAAAATGTCCAGCCTCATGTATCCTCACGGGCTTGGTCATAGCACTCAAGCCAGCTCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS GCA 90 bp GCCAGGGTAGCTATTTCAGTTCAATTAAATCAGCAGCTCCCTGGCTaGATGAGCCACACTTCAAGTGCCATTCAGCACCATGAGCAGCCA +
Preference number: 5 (lower is better)
Translates to: ARVAISVQLNQQLPG*MSHTSSAIQHHEQP
Trigger: TGGCTGCTCATGGTGCTGAATGGCACTTGAAGTGTGGCTCATGCAGCCAGGGAGCTGCTGATTTAATTGAACTGAAATAGCTACCCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS CCA 90 bp TTCTTGCTCTTTGTCTGTCTCTCTCCTCTACTCTTGACCCCTCTATaGGGTCAGAGACCTTCTCACTCACTGCTGTGTCCCCAGCATCTA +
Preference number: 5 (lower is better)
Translates to: FLLFVCLSPLLLTPL*GQRPSHSLLCPQHL
Trigger: TAGATGCTGGGGACACAGCAGTGAGTGAGAAGGTCTCTGACCCCATAGAGGGGTCAAGAGTAGAGGAGAGAGACAGACAAAGAGCAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS-3UTR CAA 90 bp GTCTCATCATTGGACCTCAGTGGTTCTCACCGCCCCAACCACAGAGTGAAGGTCAAGGTGATAACCACCTaGCACTTGGCATCATTGATC +
Preference number: 5 (lower is better)
Translates to: VSSLDLSGSHRPNHRVKVKVITT*HLASLI
Trigger: GATCAATGATGCCAAGTGCAAGGTGGTTATCACCTT...GACCTTCACTCTGTGGTTGGGGCGGTGAGAACCACTGAGGTCCAATGATGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CAA 90 bp ATGCCCGGGACCATGTCCAGGTTCCTCTCAGCAACATGGAAAGCTAAGCCATTTAAAGATGCCGGAGGCTaGGAAGTTCTCAAGGGAACT +
Preference number: 5 (lower is better)
Translates to: MPGTMSRFLSATWKAKPFKDAGG*EVLKGT
Trigger: AGTTCCCTTGAGAACTTCCAAGCCTCCGGCATCTTT...AAATGGCTTAGCTTTCCATGTTGCTGAGAGGAACCTGGACATGGTCCCGGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CAA 90 bp CTCCAAGTCTCATCATTGGACCTCAGTGGTTCTCACCGCCCCAACCACAGAGTGGAAGAACCCAACTATTaGGAGTATGTTGCCTCTCCT +
Preference number: 5 (lower is better)
Translates to: LQVSSLDLSGSHRPNHRVEEPNY*EYVASP
Trigger: AGGAGAGGCAACATACTCCAAATAGTTGGGTTCTTC...CACTCTGTGGTTGGGGCGGTGAGAACCACTGAGGTCCAATGATGAGACTTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CAA 90 bp CACAGAGTGAAGGTCAGGCAGCGTTTGCCAGGATTTGGCTCTGACCAAGTTAGTCTCCAAGTCTCATCATaGGACCTCAGTGGTTCTCAC +
Preference number: 5 (lower is better)
Translates to: HRVKVRQRLPGFGSDQVSLQVSS*DLSGSH
Trigger: GTGAGAACCACTGAGGTCCAATGATGAGACTTGGAG...ACTAACTTGGTCAGAGCCAAATCCTGGCAAACGCTGCCTGACCTTCACTCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CAA 90 bp CTGGATCCAGACCTCCAAGTCTCATCATTGGACCTCAGTGGTTCTCACCGCCCCACTATTTGGAGTATGTaGATGACATCATCCATCCGC +
Preference number: 5 (lower is better)
Translates to: LDPDLQVSSLDLSGSHRPTIWSM*MTSSIR
Trigger: GCGGATGGATGATGTCATCAACATACTCCAAATAGT...GGGGCGGTGAGAACCACTGAGGTCCAATGATGAGACTTGGAGGTCTGGATCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432802.6
CDS GCA 90 bp ACTAGACAAGGAGCCAACTCCCGAGGCAGGGTGCTATGCACAGACTaGCAGAAATCCGAAGGGCTTTTGAATCCTATGTTAGTGACATTG +
Preference number: 5 (lower is better)
Translates to: TRQGANSRGRVLCTD*QKSEGLLNPMLVTL
Trigger: CAATGTCACTAACATAGGATTCAAAAGCCCTTCGGATTTCTGGCAGTCTGTGCATAGCACCCTGCCTCGGGAGTTGGCTCCTTGTCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS-3UTR CAA 90 bp AGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACAGGTTCACTCAAGGTGATAACCACCTaGCACTTGGCATCATTGATC +
Preference number: 5 (lower is better)
Translates to: SICVPCSQHHLLGFTGSLKVITT*HLASLI
Trigger: GATCAATGATGCCAAGTGCAAGGTGGTTATCACCTT...GAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CAA 90 bp CTCCTATCAAGAGGCATCTGGGGGCACAAAAATCTTTCTGGATCACAGCTTGAACCCCGGAGTCCTTGGTaGAAGGTGATAACCACCTTG +
Preference number: 5 (lower is better)
Translates to: LLSRGIWGHKNLSGSQLEPRSPW*KVITTL
Trigger: CAAGGTGGTTATCACCTTCAACCAAGGACTCCGGGG...TTCAAGCTGTGATCCAGAAAGATTTTTGTGCCCCCAGATGCCTCTTGATAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CAA 90 bp ACATTAAAACAAAGAGAGACTGGATCCAGACCTCCAAGTCTCATCATTGGACCTTCCCAGGCCTCACAGTaGATGGGCTCTCCCACTGAC +
Preference number: 5 (lower is better)
Translates to: TLKQRETGSRPPSLIIGPSQASQ*MGSPTD
Trigger: GTCAGTGGGAGAGCCCATCAACTGTGAGGCCTGGGA...AGGTCCAATGATGAGACTTGGAGGTCTGGATCCAGTCTCTCTTTGTTTTAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CAA 90 bp AAGAACCCAACTATTTGGAGTATGTTGCCTCTCCTATCAAGAGGCATCTGGGGGGCATATTTGGCGATCTaGGTGGCCACCATGGACTTG +
Preference number: 5 (lower is better)
Translates to: KNPTIWSMLPLLSRGIWGAYLAI*VATMDL
Trigger: CAAGTCCATGGTGGCCACCAAGATCGCCAAATATGC...CCCCCAGATGCCTCTTGATAGGAGAGGCAACATACTCCAAATAGTTGGGTTCTT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS CCA 90 bp AAAGGTCACTTCCATTGTCCTTTCCTTGATCTTGCACTTGCTTTATaGAGTTCAATCCAGGGGCTGCTGAATCCCCAGACACAGTGGACC +
Preference number: 5 (lower is better)
Translates to: KGHFHCPFLDLALAL*SSIQGLLNPQTQWT
Trigger: GGTCCACTGTGTCTGGGGATTCAGCAGCCCCTGGATTGAACTCCATAAAGCAAGTGCAAGATCAAGGAAAGGACAATGGAAGTGACCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS-3UTR CAA 90 bp CAAAGAGAGACTGGATCCAGACCTCCAAGTCTCATCATTGGACCTCAGTGGTTCATAACCACCTTGCACTaGGCATCATTGATCCTCCCA +
Preference number: 5 (lower is better)
Translates to: QRETGSRPPSLIIGPQWFITTLH*ASLILP
Trigger: TGGGAGGATCAATGATGCCAAGTGCAAGGTGGTTAT...GAACCACTGAGGTCCAATGATGAGACTTGGAGGTCTGGATCCAGTCTCTCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CAA 90 bp CAAAATAAAGCTTTATTTGAACTCCCTCCCCTACAGATCATTCAGATGCCCGGGTCAGGCACAGCATATTaGGCGATCTTGGTGGCCACC +
Preference number: 5 (lower is better)
Translates to: QNKALFELPPLQIIQMPGSGTAY*AILVAT
Trigger: GGTGGCCACCAAGATCGCCAAATATGCTGTGCCTGA...CCCGGGCATCTGAATGATCTGTAGGGGAGGGAGTTCAAATAAAGCTTTATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CAA 90 bp TCAAGAGGCATCTGGGGGCACAAAAATCTTTCTGGATCACAGCTTGAAGAAACAAAGGTCAGGCAGCGTTaGCCAGGATTTGGCTCTGAC +
Preference number: 5 (lower is better)
Translates to: SRGIWGHKNLSGSQLEETKVRQR*PGFGSD
Trigger: GTCAGAGCCAAATCCTGGCAAACGCTGCCTGACCTT...TGTTTCTTCAAGCTGTGATCCAGAAAGATTTTTGTGCCCCCAGATGCCTCTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CAA 90 bp TGGTTCTCACCGCCCCAACCACAGAGTGAAGGTCAGGCAGCGTTTGCCAGGATTATTATCTTGCTAATGTaGACAGCACCTAAGTCACAT +
Preference number: 5 (lower is better)
Translates to: WFSPPQPQSEGQAAFARIIILLM*TAPKSH
Trigger: ATGTGACTTAGGTGCTGTCAACATTAGCAAGATAAT...AATCCTGGCAAACGCTGCCTGACCTTCACTCTGTGGTTGGGGCGGTGAGAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS TCA 90 bp CCTGCACCACCACATCTGAGTCACCCGCACTATCTTTCACCACAATaGAGGCAAAGGCAGCTGAAAATAAAGCCAAGTTTGGGGATGTAT +
Preference number: 5 (lower is better)
Translates to: PAPPHLSHPHYLSPQ*RQRQLKIKPSLGMY
Trigger: ATACATCCCCAAACTTGGCTTTATTTTCAGCTGCCTTTGCCTTCATTGTGGTGAAAGATAGTGCGGGTGACTCAGATGTGGTGGTGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS-3UTR CAA 90 bp AACAAAGAGAGACTGGATCCAGACCTCCAAGTCTCATCATTGGACCTCAGTGGTTGCTGGTCCAAGCAGTaGACAGAGACATTTAACTGG +
Preference number: 5 (lower is better)
Translates to: NKERLDPDLQVSSLDLSGCWSKQ*TETFNW
Trigger: CCAGTTAAATGTCTCTGTCAACTGCTTGGACCAGCA...ACCACTGAGGTCCAATGATGAGACTTGGAGGTCTGGATCCAGTCTCTCTTTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000432802.6
CDS-3UTR CAA 90 bp CCCCCATGCCCAGGGCACAGCTTTGTTGCTAAGCCTGTAACAAAAGACCACCACATTATCTTGCTAATGTaGACAGCACCTAAGTCACAT +
Preference number: 5 (lower is better)
Translates to: PPCPGHSFVAKPVTKDHHIILLM*TAPKSH
Trigger: ATGTGACTTAGGTGCTGTCAACATTAGCAAGATAAT...GTGGTGGTCTTTTGTTACAGGCTTAGCAACAAAGCTGTGCCCTGGGCATGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CAA 90 bp AAGACCACCACTCAGTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTGAAGAACCCAACTATTaGGAGTATGTTGATGACATC +
Preference number: 5 (lower is better)
Translates to: KTTTQYLCTLQPTPPPGLEEPNY*EYVDDI
Trigger: GATGTCATCAACATACTCCAAATAGTTGGGTTCTTC...AAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATACTGAGTGGTGGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432802.6
CDS GCA 90 bp GTATTAAATACTAGACAAGGAGCCAACTCCCGAGGCAGGGTGCTATaGACAGACTGCCAGAAATCCGAAGGGCTTTTGAATCCTATGTTA +
Preference number: 5 (lower is better)
Translates to: VLNTRQGANSRGRVL*TDCQKSEGLLNPML
Trigger: TAACATAGGATTCAAAAGCCCTTCGGATTTCTGGCAGTCTGTGCATAGCACCCTGCCTCGGGAGTTGGCTCCTTGTCTAGTATTTAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS-3UTR CAA 90 bp CAAAATAAAGCTTTATTTGAACTCCCTCCCCTACAGATCATTCAGATGCCCGGGCTCCAAGTCTCATCATaGGACCTCAGTGGTTCTCAC +
Preference number: 5 (lower is better)
Translates to: QNKALFELPPLQIIQMPGLQVSS*DLSGSH
Trigger: GTGAGAACCACTGAGGTCCAATGATGAGACTTGGAG...CCCGGGCATCTGAATGATCTGTAGGGGAGGGAGTTCAAATAAAGCTTTATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CAA 90 bp GTATTTGTGTACCCTGCAGCCAACACCACCTCCTGGGCTTCACAGGTTCACTCAATTATCTTGCTAATGTaGACAGCACCTAAGTCACAT +
Preference number: 5 (lower is better)
Translates to: VFVYPAANTTSWASQVHSIILLM*TAPKSH
Trigger: ATGTGACTTAGGTGCTGTCAACATTAGCAAGATAAT...TGAGTGAACCTGTGAAGCCCAGGAGGTGGTGTTGGCTGCAGGGTACACAAATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CAA 90 bp ACATTAAAACAAAGAGAGACTGGATCCAGACCTCCAAGTCTCATCATTGGACCTACCACCACTCAGTATTaGTGTACCCTGCAGCCAACA +
Preference number: 5 (lower is better)
Translates to: TLKQRETGSRPPSLIIGPTTTQY*CTLQPT
Trigger: TGTTGGCTGCAGGGTACACAAATACTGAGTGGTGGT...AGGTCCAATGATGAGACTTGGAGGTCTGGATCCAGTCTCTCTTTGTTTTAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS-3UTR CAA 90 bp CACAGAGTGAAGGTCAGGCAGCGTTTGCCAGGATTTGGCTCTGACCAAGTTAGTAAAATAAAGCTTTATTaGAACTCCCTCCCCTACAGA +
Preference number: 5 (lower is better)
Translates to: HRVKVRQRLPGFGSDQVSKIKLY*NSLPYR
Trigger: TCTGTAGGGGAGGGAGTTCAAATAAAGCTTTATTTT...ACTAACTTGGTCAGAGCCAAATCCTGGCAAACGCTGCCTGACCTTCACTCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS-3UTR CAA 90 bp ATGCCCGGGACCATGTCCAGGTTCCTCTCAGCAACATGGAAAGCTAAGCCATTTAAAATAAAGCTTTATTaGAACTCCCTCCCCTACAGA +
Preference number: 5 (lower is better)
Translates to: MPGTMSRFLSATWKAKPFKIKLY*NSLPYR
Trigger: TCTGTAGGGGAGGGAGTTCAAATAAAGCTTTATTTT...AAATGGCTTAGCTTTCCATGTTGCTGAGAGGAACCTGGACATGGTCCCGGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS GCA 90 bp TCTTTCCTTTCGGCGCCTCATCCCTCTGAATCTGGACCTGGCAATTaGATTAACCACTTTCCCACTCTTGCTGTACTGACTTTAATTAAT +
Preference number: 5 (lower is better)
Translates to: SFLSAPHPSESGPGN*INHFPTLAVLTLIN
Trigger: ATTAATTAAAGTCAGTACAGCAAGAGTGGGAAAGTGGTTAATGCAATTGCCAGGTCCAGATTCAGAGGGATGAGGCGCCGAAAGGAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537502.5
CDS-3UTR CAA 90 bp CTGGCTGTGGTCCTGAGAATTCTCACATGGTTTATGTTTAACCACACGTCTCCATCAAACTCTGTGACCTaGAGCAAGTTCCTTAACTTC +
Preference number: 5 (lower is better)
Translates to: LAVVLRILTWFMFNHTSPSNSVT*SKFLNF
Trigger: GAAGTTAAGGAACTTGCTCAAGGTCACAGAGTTTGA...TGGAGACGTGTGGTTAAACATAAACCATGTGAGAATTCTCAGGACCACAGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS-3UTR CAA 90 bp AATAAAGCTTTATTTGAACTCCCTCCCCTACAGATCATTCAGATGCCCGGGACCAAAATAAAGCTTTATTaGAACTCCCTCCCCTACAGA +
Preference number: 5 (lower is better)
Translates to: NKALFELPPLQIIQMPGTKIKLY*NSLPYR
Trigger: TCTGTAGGGGAGGGAGTTCAAATAAAGCTTTATTTT...GGTCCCGGGCATCTGAATGATCTGTAGGGGAGGGAGTTCAAATAAAGCTTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS CCA 90 bp AGCCCACATTATAGCATAAATACTAGCTTTCGTTTTTCAGTACCCTaGCATGTTCCAGGAAGAGTTCACACTGTGAAGAGGGATCTAATT +
Preference number: 5 (lower is better)
Translates to: SPHYSINTSFRFSVP*HVPGRVHTVKRDLI
Trigger: AATTAGATCCCTCTTCACAGTGTGAACTCTTCCTGGAACATGCCAGGGTACTGAAAAACGAAAGCTAGTATTTATGCTATAATGTGGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS TCA 90 bp AGCATAGCCTTTCCATGGCAACTGAAAATGCTGTTTGTAAAGCACTaGAACAAATTCTCAATCTTGCAATGCGTCAATTTAAAGAGAGCA +
Preference number: 5 (lower is better)
Translates to: SIAFPWQLKMLFVKH*NKFSILQCVNLKRA
Trigger: TGCTCTCTTTAAATTGACGCATTGCAAGATTGAGAATTTGTTTCAGTGCTTTACAAACAGCATTTTCAGTTGCCATGGAAAGGCTATGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS GCA 72 bp AGGCCCCCAGAAGGCGGCCGGCTCCCGGGCTGCCTGTaGACTCAGCGCGGGATACGAGCCTGGCTGTGCTGC +
Preference number: 6 (lower is better)
Translates to: RPPEGGRLPGCL*TQRGIRAWLCC
Trigger: GCAGCACAGCCAGGCTCGTATCCCGCGCTGAGTGCACAGGCAGCCCGGGAGCCGGCCGCCTTCTGGGGGCCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000376726.3
ENST00000432802.6
CDS GCA 72 bp GGGATACGAGCCTGGCTGTGCTGCTGCTGCTGCAACTaGGGGAGCGCTGCCCGAGGGTCCCGAGGCCGCCCT +
Preference number: 6 (lower is better)
Translates to: GIRAWLCCCCCN*GSAARGSRGRP
Trigger: AGGGCGGCCTCGGGACCCTCGGGCAGCGCTCCCGCAGTTGCAGCAGCAGCAGCACAGCCAGGCTCGTATCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000376726.3
ENST00000432802.6
CDS GCA 72 bp CAGCGCGGGATACGAGCCTGGCTGTGCTGCTGCTGCTaGAACTGCGGGAGCGCTGCCCGAGGGTCCCGAGGC +
Preference number: 6 (lower is better)
Translates to: QRGIRAWLCCCC*NCGSAARGSRG
Trigger: GCCTCGGGACCCTCGGGCAGCGCTCCCGCAGTTGCAGCAGCAGCAGCACAGCCAGGCTCGTATCCCGCGCTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000376726.3
ENST00000432802.6
CDS TCA 72 bp GGCCCAGGGTGCGCGCCGCCATCTAGGCAGGCTACCTaGGCTCTCTGTGCTCCCAGAGTGGGTGCCTCACGC +
Preference number: 6 (lower is better)
Translates to: GPGCAPPSRQAT*ALCAPRVGASR
Trigger: GCGTGAGGCACCCACTCTGGGAGCACAGAGAGCTCAGGTAGCCTGCCTAGATGGCGGCGCGCACCCTGGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376726.3
ENST00000432802.6
CDS GCA 72 bp ACTCAGCGCGGGATACGAGCCTGGCTGTGCTGCTGCTaGTGCAACTGCGGGAGCGCTGCCCGAGGGTCCCGA +
Preference number: 6 (lower is better)
Translates to: TQRGIRAWLCCC*CNCGSAARGSR
Trigger: TCGGGACCCTCGGGCAGCGCTCCCGCAGTTGCAGCAGCAGCAGCACAGCCAGGCTCGTATCCCGCGCTGAGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000376726.3
ENST00000432802.6
CDS GCA 72 bp TGCACTCAGCGCGGGATACGAGCCTGGCTGTGCTGCTaGTGCTGCAACTGCGGGAGCGCTGCCCGAGGGTCC +
Preference number: 6 (lower is better)
Translates to: CTQRGIRAWLCC*CCNCGSAARGS
Trigger: GGACCCTCGGGCAGCGCTCCCGCAGTTGCAGCAGCAGCAGCACAGCCAGGCTCGTATCCCGCGCTGAGTGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000376726.3
ENST00000432802.6
CDS GCA 72 bp CTGTGCACTCAGCGCGGGATACGAGCCTGGCTGTGCTaGTGCTGCTGCAACTGCGGGAGCGCTGCCCGAGGG +
Preference number: 6 (lower is better)
Translates to: LCTQRGIRAWLC*CCCNCGSAARG
Trigger: CCCTCGGGCAGCGCTCCCGCAGTTGCAGCAGCAGCAGCACAGCCAGGCTCGTATCCCGCGCTGAGTGCACAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000376726.3
ENST00000432802.6
CDS GCA 72 bp AAGCCCCGACAGCTTCTTCGAGCTGCCAGAGGCACGTaGGGCCCAGGACCCCAGGACGCAGGCTCAGGGCCT +
Preference number: 6 (lower is better)
Translates to: KPRQLLRAARGT*GPGPQDAGSGP
Trigger: AGGCCCTGAGCCTGCGTCCTGGGGTCCTGGGCCGCACGTGCCTCTGGCAGCTCGAAGAAGCTGTCGGGGCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS CCA 72 bp CCGGGCTGCCTGTGCACTCAGCGCGGGATACGAGCCTaGCTGTGCTGCTGCTGCTGCAACTGCGGGAGCGCT +
Preference number: 6 (lower is better)
Translates to: PGCLCTQRGIRA*LCCCCCNCGSA
Trigger: AGCGCTCCCGCAGTTGCAGCAGCAGCAGCACAGCCAGGCTCGTATCCCGCGCTGAGTGCACAGGCAGCCCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000376726.3
ENST00000432802.6
CDS CCA 72 bp CTAGGCAGGCTACCTGAGCTCTCTGTGCTCCCAGAGTaGGTGCCTCACGCCCGGGGCGCCCCGTGGAGTCTC +
Preference number: 6 (lower is better)
Translates to: LGRLPELSVLPE*VPHARGAPWSL
Trigger: GAGACTCCACGGGGCGCCCCGGGCGTGAGGCACCCACTCTGGGAGCACAGAGAGCTCAGGTAGCCTGCCTAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376726.3
ENST00000432802.6
CDS GCA 72 bp TGCCTGTGCACTCAGCGCGGGATACGAGCCTGGCTGTaGTGCTGCTGCTGCAACTGCGGGAGCGCTGCCCGA +
Preference number: 6 (lower is better)
Translates to: CLCTQRGIRAWL*CCCCNCGSAAR
Trigger: TCGGGCAGCGCTCCCGCAGTTGCAGCAGCAGCAGCACAGCCAGGCTCGTATCCCGCGCTGAGTGCACAGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000376726.3
ENST00000432802.6
CDS CCA 72 bp CCCACCCCTGGAGTCTCAGCAGCACGCGAAAGGGGCTaGCGCCTTTCTAGGCTCCCGCCTAGAAGCCAGGAG +
Preference number: 6 (lower is better)
Translates to: PTPGVSAARERG*RLSRLPPRSQE
Trigger: CTCCTGGCTTCTAGGCGGGAGCCTAGAAAGGCGCCAGCCCCTTTCGCGTGCTGCTGAGACTCCAGGGGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS CCA 72 bp GGTCCCCACGGTGGACTCCATGCCTCTTCAGCGTGTTaGCCAGGCGGCACGTGGTCTCCAGTAGTTCCCGGC +
Preference number: 6 (lower is better)
Translates to: GPHGGLHASSAC*PGGTWSPVVPG
Trigger: GCCGGGAACTACTGGAGACCACGTGCCGCCTGGCCAACACGCTGAAGAGGCATGGAGTCCACCGTGGGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537502.5
CDS CAA 72 bp CGCCAGGCCAGGCAGTGTGCCTGGATGGACCTGGCATaGCAACACCTAGGTGCTCCCGCCCCTTCCCAGACC +
Preference number: 6 (lower is better)
Translates to: RQARQCAWMDLA*QHLGAPAPSQT
Trigger: GGTCTGGGAAGGGGCGGGAGCACCTAGGTGTTGCAATGCCAGGTCCATCCAGGCACACTGCCTGGCCTGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS CAA 72 bp CGGTCCCCACGGTGGACTCCATGCCTCTTCAGCGTGTaGGCCAGGCGGCACGTGGTCTCCAGTAGTTCCCGG +
Preference number: 6 (lower is better)
Translates to: RSPRWTPCLFSV*ARRHVVSSSSR
Trigger: CCGGGAACTACTGGAGACCACGTGCCGCCTGGCCAACACGCTGAAGAGGCATGGAGTCCACCGTGGGGACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537502.5
CDS CAA 90 bp TCCAGGTCACGCCAGGCCAGGCAGTGTGCCTGGATGGACCTGGCATaGCAACACCTAGGTGCTCCCGCCCCTTCCCAGACCCAGCCACCA +
Preference number: 6 (lower is better)
Translates to: SRSRQARQCAWMDLA*QHLGAPAPSQTQPP
Trigger: TGGTGGCTGGGTCTGGGAAGGGGCGGGAGCACCTAGGTGTTGCAATGCCAGGTCCATCCAGGCACACTGCCTGGCCTGGCGTGACCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS CCA 72 bp GGACGGGGACGATGCCAAAGAAGGGCCTCATCGCCATaGCAGGGAGGATTTCCGCCCCTTCTTCCGAGGGCC +
Preference number: 6 (lower is better)
Translates to: GRGRCQRRASSP*QGGFPPLLPRA
Trigger: GGCCCTCGGAAGAAGGGGCGGAAATCCTCCCTGCCATGGCGATGAGGCCCTTCTTTGGCATCGTCCCCGTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS CCA 72 bp CCCAGACACAGTGGACCATGCCCGGACCCCTCTCAGTaGCCCCAGGGAGTACTGGCTCAGCCACTGGACTCA +
Preference number: 6 (lower is better)
Translates to: PRHSGPCPDPSQ*PQGVLAQPLDS
Trigger: TGAGTCCAGTGGCTGAGCCAGTACTCCCTGGGGCCACTGAGAGGGGTCCGGGCATGGTCCACTGTGTCTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS CAA 72 bp CGGTCCCCACGGTGGACTCCATGCCTCTTCAGCGTGTaGGCCAGGCGGCACGTGGTCTCCAGTAGTTCCCTG +
Preference number: 6 (lower is better)
Translates to: RSPRWTPCLFSV*ARRHVVSSSSL
Trigger: CAGGGAACTACTGGAGACCACGTGCCGCCTGGCCAACACGCTGAAGAGGCATGGAGTCCACCGTGGGGACCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000432802.6
CDS CAA 90 bp AGACGCCAACCTCAGGGGTACCTTCTGGGAAGGACAAGCCAGGGCTaGGGTGCCCGCCCATCCCAAGAGCCCCACAAGGTGCCAGCTCAC +
Preference number: 6 (lower is better)
Translates to: RRQPQGYLLGRTSQG*GARPSQEPHKVPAH
Trigger: GTGAGCTGGCACCTTGTGGGGCTCTTGGGATGGGCGGGCACCCAAGCCCTGGCTTGTCCTTCCCAGAAGGTACCCCTGAGGTTGGCGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000484396.1
ENST00000537502.5
CDS CAA 90 bp ATGGCAACACGGTCCCCACGGTGGACTCCATGCCTCTTCAGCGTGTaGGCCAGGCGGCACGTGGTCTCCAGTAGTTCCCGGCCATGCGGT +
Preference number: 6 (lower is better)
Translates to: MATRSPRWTPCLFSV*ARRHVVSSSSRPCG
Trigger: ACCGCATGGCCGGGAACTACTGGAGACCACGTGCCGCCTGGCCAACACGCTGAAGAGGCATGGAGTCCACCGTGGGGACCGTGTTGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537502.5
CDS GCA 72 bp CCGCCCCTTCTTCCGAGGGCCGTGGTGCGATGCAGATaGCACCTGTTTCTGTCTGCCACCAGGTGTCCACCA +
Preference number: 6 (lower is better)
Translates to: PPLLPRAVVRCR*HLFLSATRCPP
Trigger: TGGTGGACACCTGGTGGCAGACAGAAACAGGTGGCATCTGCATCGCACCACGGCCCTCGGAAGAAGGGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS CCA 72 bp GGTCCCCACGGTGGACTCCATGCCTCTTCAGCGTGTTaGCCAGGCGGCACGTGGTCTCCAGTAGTTCCCTGT +
Preference number: 6 (lower is better)
Translates to: GPHGGLHASSAC*PGGTWSPVVPC
Trigger: ACAGGGAACTACTGGAGACCACGTGCCGCCTGGCCAACACGCTGAAGAGGCATGGAGTCCACCGTGGGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000432802.6
CDS CCA 72 bp CTCCATGCCTCTTCAGCGTGTTGGCCAGGCGGCACGTaGTCTCCAGTAGTTCCCGGCCATGCGGTGCGAAGT +
Preference number: 6 (lower is better)
Translates to: LHASSACWPGGT*SPVVPGHAVRS
Trigger: ACTTCGCACCGCATGGCCGGGAACTACTGGAGACCACGTGCCGCCTGGCCAACACGCTGAAGAGGCATGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537502.5
CDS TCA 72 bp ACTGGCCTCCCAGGAACCAGCCGATCTTGCCAGTGCTaGAGTCGCAGTCCCAGACGGTGTGGTAGGGGGTGT +
Preference number: 6 (lower is better)
Translates to: TGLPGTSRSCQC*SRSPRRCGRGC
Trigger: ACACCCCCTACCACACCGTCTGGGACTGCGACTTCAGCACTGGCAAGATCGGCTGGTTCCTGGGAGGCCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000376726.3
ENST00000432802.6
CDS GCA 72 bp CACCTGTTTCTGTCTGCCACCAGGTGTCCACCAGCGTaGACCTGCTGTCCCCCACCACCCTGTGAAGCCACT +
Preference number: 6 (lower is better)
Translates to: HLFLSATRCPPA*TCCPPPPCEAT
Trigger: AGTGGCTTCACAGGGTGGTGGGGGACAGCAGGTGCACGCTGGTGGACACCTGGTGGCAGACAGAAACAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS GCA 72 bp ACTCCAGAGCACACTCTGGCACACACGCGTGGCGGCTaGAGAGCTGGCTTGAGTGCTATGACCAAGCCCGTG +
Preference number: 6 (lower is better)
Translates to: TPEHTLAHTRGG*RAGLSAMTKPV
Trigger: CACGGGCTTGGTCATAGCACTCAAGCCAGCTCTGCAGCCGCCACGCGTGTGTGCCAGAGTGTGCTCTGGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS GCA 72 bp GTGTGCCTGGATGGACCTGGCATTGCAACACCTAGGTaGTCCCGCCCCTTCCCAGACCCAGCCACCAAGAAG +
Preference number: 6 (lower is better)
Translates to: VCLDGPGIATPR*SRPFPDPATKK
Trigger: CTTCTTGGTGGCTGGGTCTGGGAAGGGGCGGGAGCACCTAGGTGTTGCAATGCCAGGTCCATCCAGGCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS GCA 72 bp AAGGAGTTGCTCATCCCGGTGCCATCCCTGATAGCCTaGCCGTCCCCACTGGCCTGTGAGGTGCTCTGTCTC +
Preference number: 6 (lower is better)
Translates to: KELLIPVPSLIA*PSPLACEVLCL
Trigger: GAGACAGAGCACCTCACAGGCCAGTGGGGACGGGCAGGCTATCAGGGATGGCACCGGGATGAGCAACTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS CCA 72 bp GGCAGGGAGGATTTCCGCCCCTTCTTCCGAGGGCCGTaGTGCGATGCAGATGCCACCTGTTTCTGTCTGCCA +
Preference number: 6 (lower is better)
Translates to: GREDFRPFFRGP*CDADATCFCLP
Trigger: TGGCAGACAGAAACAGGTGGCATCTGCATCGCACCACGGCCCTCGGAAGAAGGGGCGGAAATCCTCCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS TCA 72 bp TCCAGATCCCCCATGTGGACCTTGTTGTCTGTCCTGTaGGCCACCAGGACATGCTGCACGGTGGGGCAGTGC +
Preference number: 6 (lower is better)
Translates to: SRSPMWTLLSVL*ATRTCCTVGQC
Trigger: GCACTGCCCCACCGTGCAGCATGTCCTGGTGGCTCACAGGACAGACAACAAGGTCCACATGGGGGATCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS GCA 72 bp GGATTTCCGCCCCTTCTTCCGAGGGCCGTGGTGCGATaGAGATGCCACCTGTTTCTGTCTGCCACCAGGTGT +
Preference number: 6 (lower is better)
Translates to: GFPPLLPRAVVR*RCHLFLSATRC
Trigger: ACACCTGGTGGCAGACAGAAACAGGTGGCATCTGCATCGCACCACGGCCCTCGGAAGAAGGGGCGGAAATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS GCA 72 bp AGGGAGGATTTCCGCCCCTTCTTCCGAGGGCCGTGGTaGGATGCAGATGCCACCTGTTTCTGTCTGCCACCA +
Preference number: 6 (lower is better)
Translates to: REDFRPFFRGPW*DADATCFCLPP
Trigger: TGGTGGCAGACAGAAACAGGTGGCATCTGCATCGCACCACGGCCCTCGGAAGAAGGGGCGGAAATCCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS GCA 72 bp TCAGTGTGTGTCCAGGTCACGCCAGGCCAGGCAGTGTaGCTGGATGGACCTGGCATTGCAACACCTAGGTGC +
Preference number: 6 (lower is better)
Translates to: SVCVQVTPGQAV*LDGPGIATPRC
Trigger: GCACCTAGGTGTTGCAATGCCAGGTCCATCCAGGCACACTGCCTGGCCTGGCGTGACCTGGACACACACTGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS CCA 72 bp TTGCTGCCACAGCCAATGGGGACACGGGCATGTAGATaGCAACACGGTCCCCACGGTGGACTCCATGCCTCT +
Preference number: 6 (lower is better)
Translates to: LLPQPMGTRACR*QHGPHGGLHAS
Trigger: AGAGGCATGGAGTCCACCGTGGGGACCGTGTTGCCATCTACATGCCCGTGTCCCCATTGGCTGTGGCAGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS CCA 72 bp GCGATGGCGTCCTCAATCTCTGCGGTCCCCAGCCGGTaGCCACTGATGTTGATGACATCATCCATCCGCCCT +
Preference number: 6 (lower is better)
Translates to: AMASSISAVPSR*PLMLMTSSIRP
Trigger: AGGGCGGATGGATGATGTCATCAACATCAGTGGCCACCGGCTGGGGACCGCAGAGATTGAGGACGCCATCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS CCA 72 bp GGGTCACGTCCTGCTGGGGGTCGGTGGTGGGTGATATaGGGCGATGAGGACTTTCTCCAGTTGCTGCAGCAT +
Preference number: 6 (lower is better)
Translates to: GSRPAGGRWWVI*GDEDFLQLLQH
Trigger: ATGCTGCAGCAACTGGAGAAAGTCCTCATCGCCCCATATCACCCACCACCGACCCCCAGCAGGACGTGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS CCA 72 bp GCACACTCTGGCACACACGCGTGGCGGCTGCAGAGCTaGCTTGAGTGCTATGACCAAGCCCGTGAGGATACA +
Preference number: 6 (lower is better)
Translates to: AHSGTHAWRLQS*LECYDQAREDT
Trigger: TGTATCCTCACGGGCTTGGTCATAGCACTCAAGCCAGCTCTGCAGCCGCCACGCGTGTGTGCCAGAGTGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS CCA 72 bp CCTGCACACTCCAGAGCACACTCTGGCACACACGCGTaGCGGCTGCAGAGCTGGCTTGAGTGCTATGACCAA +
Preference number: 6 (lower is better)
Translates to: PAHSRAHSGTHA*RLQSWLECYDQ
Trigger: TTGGTCATAGCACTCAAGCCAGCTCTGCAGCCGCCACGCGTGTGTGCCAGAGTGTGCTCTGGAGTGTGCAGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS CCA 72 bp CTCGTCTCCGTCCTCTCTGACCCTCCTGATCACATCTaGACATGTCACCGGGCAGGGGTCCCTACCAGCTCT +
Preference number: 6 (lower is better)
Translates to: LVSVLSDPPDHI*TCHRAGVPTSS
Trigger: AGAGCTGGTAGGGACCCCTGCCCGGTGACATGTCCAGATGTGATCAGGAGGGTCAGAGAGGACGGAGACGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS CAA 90 bp GGTCCCACCCGGATGTTCCTCGAGTCGGCCTGTTTTGGTTTCAGTTaGCACGCTCTCCTGCAAGCCCCGACAGCTTCTTCGAGCTGCCAG +
Preference number: 6 (lower is better)
Translates to: GPTRMFLESACFGFS*HALLQAPTASSSCQ
Trigger: CTGGCAGCTCGAAGAAGCTGTCGGGGCTTGCAGGAGAGCGTGCAAACTGAAACCAAAACAGGCCGACTCGAGGAACATCCGGGTGGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS CAA 90 bp CCAGAGCACACTCTGGCACACACGCGTGGCGGCTGCAGAGCTGGCTaGAGTGCTATGACCAAGCCCGTGAGGATACATGAGGCTGGACAT +
Preference number: 6 (lower is better)
Translates to: PEHTLAHTRGGCRAG*SAMTKPVRIHEAGH
Trigger: ATGTCCAGCCTCATGTATCCTCACGGGCTTGGTCATAGCACTCAAGCCAGCTCTGCAGCCGCCACGCGTGTGTGCCAGAGTGTGCTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS CAA 90 bp CCGGCCATGCGGTGCGAAGTGGAGGAAGTGGAAGCGATCCCAAGGTaGTCTTTCCTTTCGGCGCCTCATCCCTCTGAATCTGGACCTGGC +
Preference number: 6 (lower is better)
Translates to: PAMRCEVEEVEAIPR*SFLSAPHPSESGPG
Trigger: GCCAGGTCCAGATTCAGAGGGATGAGGCGCCGAAAGGAAAGACAACCTTGGGATCGCTTCCACTTCCTCCACTTCGCACCGCATGGCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537502.5
CDS GCA 72 bp AAGCTTGTGAGTCAGGGCGGCATAGAGCAGGTAGCCTaGCTGGGTATGGACGATGCCCTTGGGCATTCCGGT +
Preference number: 6 (lower is better)
Translates to: KLVSQGGIEQVA*LGMDDALGHSG
Trigger: ACCGGAATGCCCAAGGGCATCGTCCATACCCAGGCAGGCTACCTGCTCTATGCCGCCCTGACTCACAAGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS GCA 72 bp GTCGTGGGGGTAGCCAATGACAGCACTTTCTGGTACTaGAGGGTGGTCGGCGATGGCGTCCTCAATCTCTGC +
Preference number: 6 (lower is better)
Translates to: VVGVANDSTFWY*RVVGDGVLNLC
Trigger: GCAGAGATTGAGGACGCCATCGCCGACCACCCTGCAGTACCAGAAAGTGCTGTCATTGGCTACCCCCACGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS GCA 72 bp AGATTCGTCCAAAGAGTCCCAGCGCAGCACACAGCCTaGACACTCCAGAGCACACTCTGGCACACACGCGTG +
Preference number: 6 (lower is better)
Translates to: RFVQRVPAQHTA*TLQSTLWHTRV
Trigger: CACGCGTGTGTGCCAGAGTGTGCTCTGGAGTGTGCAGGCTGTGTGCTGCGCTGGGACTCTTTGGACGAATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS CCA 72 bp AGACTTGCAATAGCTCCACACACGCAGAACGTGCCCTaGGCAGCAGCGTCCACAGCAGACCATGCCCCAACA +
Preference number: 6 (lower is better)
Translates to: RLAIAPHTQNVP*AAASTADHAPT
Trigger: TGTTGGGGCATGGTCTGCTGTGGACGCTGCTGCCCAGGGCACGTTCTGCGTGTGTGGAGCTATTGCAAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS CCA 72 bp AGGATGGAGCTGGAGGGAGGAAACCTTCCACATGGGTaGAGGAGCCAGTTAAGAGCCAGGACGAGGCAGGCA +
Preference number: 6 (lower is better)
Translates to: RMELEGGNLPHG*RSQLRARTRQA
Trigger: TGCCTGCCTCGTCCTGGCTCTTAACTGGCTCCTCCACCCATGTGGAAGGTTTCCTCCCTCCAGCTCCATCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS CCA 72 bp TGCACAGATGCACAGCAAATGGGCACCACCAGCCTTTaGGGGTGTGTGTGCAACATGGTGCCATGGGCCAGG +
Preference number: 6 (lower is better)
Translates to: CTDAQQMGTTSL*GCVCNMVPWAR
Trigger: CCTGGCCCATGGCACCATGTTGCACACACACCCCCAAAGGCTGGTGGTGCCCATTTGCTGTGCATCTGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS CCA 72 bp TGGCTGAGAGCTTGGCATCTCAGCTCTAATGCTGACTaGCTGCGTGTGACCTGGGACATGGGACCTCCCCTC +
Preference number: 6 (lower is better)
Translates to: WLRAWHLSSNAD*LRVTWDMGPPL
Trigger: GAGGGGAGGTCCCATGTCCCAGGTCACACGCAGCCAGTCAGCATTAGAGCTGAGATGCCAAGCTCTCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS CAA 72 bp ACTCTGGCACACACGCGTGGCGGCTGCAGAGCTGGCTaGAGTGCTATGACCAAGCCCGTGAGGATACATGAG +
Preference number: 6 (lower is better)
Translates to: TLAHTRGGCRAG*SAMTKPVRIHE
Trigger: CTCATGTATCCTCACGGGCTTGGTCATAGCACTCAAGCCAGCTCTGCAGCCGCCACGCGTGTGTGCCAGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS CAA 72 bp GTGCACAGATGCACAGCAAATGGGCACCACCAGCCTTaGGGGGTGTGTGTGCAACATGGTGCCATGGGCCAG +
Preference number: 6 (lower is better)
Translates to: VHRCTANGHHQP*GVCVQHGAMGQ
Trigger: CTGGCCCATGGCACCATGTTGCACACACACCCCCAAAGGCTGGTGGTGCCCATTTGCTGTGCATCTGTGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS GCA 72 bp AGTCGGCCTGTTTTGGTTTCAGTTTGCACGCTCTCCTaGAAGCCCCGACAGCTTCTTCGAGCTGCCAGAGGC +
Preference number: 6 (lower is better)
Translates to: SRPVLVSVCTLS*KPRQLLRAARG
Trigger: GCCTCTGGCAGCTCGAAGAAGCTGTCGGGGCTTGCAGGAGAGCGTGCAAACTGAAACCAAAACAGGCCGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS GCA 72 bp CCCTCCTCGGGCTCTCAAGGCCGCTCGCAGCGTGTTTaGATAGCTCTCCTCTGTTCAAAGGGTAGTCAAGGA +
Preference number: 6 (lower is better)
Translates to: PSSGSQGRSQRV*IALLCSKGSQG
Trigger: TCCTTGACTACCCTTTGAACAGAGGAGAGCTATGCAAACACGCTGCGAGCGGCCTTGAGAGCCCGAGGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537502.5
CDS CCA 72 bp AGTAGTTCCCGGCCATGCGGTGCGAAGTGGAGGAAGTaGAAGCGATCCCAAGGTTGTCTTTCCTTTCGGCGC +
Preference number: 6 (lower is better)
Translates to: SSSRPCGAKWRK*KRSQGCLSFRR
Trigger: GCGCCGAAAGGAAAGACAACCTTGGGATCGCTTCCACTTCCTCCACTTCGCACCGCATGGCCGGGAACTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537502.5
CDS CAA 72 bp GAGACATTTAACTGGCCTCCCAGGAACCAGCCGATCTaGCCAGTGCTGAAGTCGCAGTCCCAGACGGTGTGG +
Preference number: 6 (lower is better)
Translates to: ETFNWPPRNQPI*PVLKSQSQTVW
Trigger: CCACACCGTCTGGGACTGCGACTTCAGCACTGGCAAGATCGGCTGGTTCCTGGGAGGCCAGTTAAATGTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000376726.3
ENST00000432802.6
CDS CAA 90 bp CATGAGAAGGTGCACAGATGCACAGCAAATGGGCACCACCAGCCTTaGGGGGTGTGTGTGCAACATGGTGCCATGGGCCAGGGTAGCTAT +
Preference number: 6 (lower is better)
Translates to: HEKVHRCTANGHHQP*GVCVQHGAMGQGSY
Trigger: ATAGCTACCCTGGCCCATGGCACCATGTTGCACACACACCCCCAAAGGCTGGTGGTGCCCATTTGCTGTGCATCTGTGCACCTTCTCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS TCA 72 bp CAGCATATTTGGCGATCTTGGTGGCCACCATGGACTTaGGCTCCTGCACCACCACATCTGAGTCACCCGCAC +
Preference number: 6 (lower is better)
Translates to: QHIWRSWWPPWT*APAPPHLSHPH
Trigger: GTGCGGGTGACTCAGATGTGGTGGTGCAGGAGCTCAAGTCCATGGTGGCCACCAAGATCGCCAAATATGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000484396.1
ENST00000537502.5
CDS TCA 72 bp CTGCATGAGCCACACTTCAAGTGCCATTCAGCACCATaGGCAGCCAGAGGCTGCCACCCTGGACAACACAGA +
Preference number: 6 (lower is better)
Translates to: LHEPHFKCHSAP*AARGCHPGQHR
Trigger: TCTGTGTTGTCCAGGGTGGCAGCCTCTGGCTGCTCATGGTGCTGAATGGCACTTGAAGTGTGGCTCATGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS TCA 72 bp CTTGGCATCTCAGCTCTAATGCTGACTGGCTGCGTGTaGCCTGGGACATGGGACCTCCCCTCTCTGTGTACA +
Preference number: 6 (lower is better)
Translates to: LGISALMLTGCV*PGTWDLPSLCT
Trigger: TGTACACAGAGAGGGGAGGTCCCATGTCCCAGGTCACACGCAGCCAGTCAGCATTAGAGCTGAGATGCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS GCA 72 bp CGTGGCCTTGGTAAAGGCCATTCTAGTCCCTCATTCTaGATTCCCCCAGCATGTCGCTGTGCAGTGGGAACC +
Preference number: 6 (lower is better)
Translates to: RGLGKGHSSPSF*IPPACRCAVGT
Trigger: GGTTCCCACTGCACAGCGACATGCTGGGGGAATGCAGAATGAGGGACTAGAATGGCCTTTACCAAGGCCACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS GCA 72 bp CAGCAAATGGGCACCACCAGCCTTTGGGGGTGTGTGTaGAACATGGTGCCATGGGCCAGGGTAGCTATTTCA +
Preference number: 6 (lower is better)
Translates to: QQMGTTSLWGCV*NMVPWARVAIS
Trigger: TGAAATAGCTACCCTGGCCCATGGCACCATGTTGCACACACACCCCCAAAGGCTGGTGGTGCCCATTTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS CCA 72 bp TTCTTCAGCTCCACCACGCGCCCACCCCGGAGTCCTTaGTTGAAGGTGATAACCACCTTGCACTTGGCATCA +
Preference number: 6 (lower is better)
Translates to: FFSSTTRPPRSP*LKVITTLHLAS
Trigger: TGATGCCAAGTGCAAGGTGGTTATCACCTTCAACCAAGGACTCCGGGGTGGGCGCGTGGTGGAGCTGAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS CCA 72 bp CCAACCGATGTCGGCCACACAGCCAAAGATGTCACCTaGCTGGTGGTCAAACACAAGCTTGTGAGTCAGGGC +
Preference number: 6 (lower is better)
Translates to: PTDVGHTAKDVT*LVVKHKLVSQG
Trigger: GCCCTGACTCACAAGCTTGTGTTTGACCACCAGCCAGGTGACATCTTTGGCTGTGTGGCCGACATCGGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS CAA 72 bp TTCAGCTCCACCACGCGCCCACCCCGGAGTCCTTGGTaGAAGGTGATAACCACCTTGCACTTGGCATCATTG +
Preference number: 6 (lower is better)
Translates to: FSSTTRPPRSPW*KVITTLHLASL
Trigger: CAATGATGCCAAGTGCAAGGTGGTTATCACCTTCAACCAAGGACTCCGGGGTGGGCGCGTGGTGGAGCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS CAA 72 bp TTTCTTCAGCTCCACCACGCGCCCACCCCGGAGTCCTaGGTTGAAGGTGATAACCACCTTGCACTTGGCATC +
Preference number: 6 (lower is better)
Translates to: FLQLHHAPTPES*VEGDNHLALGI
Trigger: GATGCCAAGTGCAAGGTGGTTATCACCTTCAACCAAGGACTCCGGGGTGGGCGCGTGGTGGAGCTGAAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS CAA 72 bp CGGATGTTCCTCGAGTCGGCCTGTTTTGGTTTCAGTTaGCACGCTCTCCTGCAAGCCCCGACAGCTTCTTCG +
Preference number: 6 (lower is better)
Translates to: RMFLESACFGFS*HALLQAPTASS
Trigger: CGAAGAAGCTGTCGGGGCTTGCAGGAGAGCGTGCAAACTGAAACCAAAACAGGCCGACTCGAGGAACATCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS TCA 72 bp ACAGCCGGACAGCCGTTGGGGCGCCATAGAACTGATTaGTCTTCAACCTCTCTACTGTCTCCCAGTACCGAC +
Preference number: 6 (lower is better)
Translates to: TAGQPLGRHRTD*SSTSLLSPSTD
Trigger: GTCGGTACTGGGAGACAGTAGAGAGGTTGAAGATCAATCAGTTCTATGGCGCCCCAACGGCTGTCCGGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS TCA 72 bp GGCCACCATGGACTTGAGCTCCTGCACCACCACATCTaGGTCACCCGCACTATCTTTCACCACAATGAAGGC +
Preference number: 6 (lower is better)
Translates to: GHHGLELLHHHI*VTRTIFHHNEG
Trigger: GCCTTCATTGTGGTGAAAGATAGTGCGGGTGACTCAGATGTGGTGGTGCAGGAGCTCAAGTCCATGGTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000484396.1
ENST00000537502.5
CDS GCA 72 bp TTGGCGATCTTGGTGGCCACCATGGACTTGAGCTCCTaGACCACCACATCTGAGTCACCCGCACTATCTTTC +
Preference number: 6 (lower is better)
Translates to: LAILVATMDLSS*TTTSESPALSF
Trigger: GAAAGATAGTGCGGGTGACTCAGATGTGGTGGTGCAGGAGCTCAAGTCCATGGTGGCCACCAAGATCGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000484396.1
ENST00000537502.5
CDS GCA 72 bp GGATGTTCCTCGAGTCGGCCTGTTTTGGTTTCAGTTTaGACGCTCTCCTGCAAGCCCCGACAGCTTCTTCGA +
Preference number: 6 (lower is better)
Translates to: GCSSSRPVLVSV*TLSCKPRQLLR
Trigger: TCGAAGAAGCTGTCGGGGCTTGCAGGAGAGCGTGCAAACTGAAACCAAAACAGGCCGACTCGAGGAACATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376726.3
CDS GCA 72 bp TCCCTCGAAGCTTCTATATATGTGTGGCTCTCCTACTaGTCATCTGCCCCAGCCCCATGCCACCTTCACCCA +
Preference number: 6 (lower is better)
Translates to: SLEASIYVWLSY*SSAPAPCHLHP
Trigger: TGGGTGAAGGTGGCATGGGGCTGGGGCAGATGAGCAGTAGGAGAGCCACACATATATAGAAGCTTCGAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS CCA 72 bp AAGGACTCTGCACTGAAGCCAGCAAAGATGACTGTGTaGACAGCTCCGATCCTGGCACAGGCCAGCATTGCT +
Preference number: 6 (lower is better)
Translates to: KDSALKPAKMTV*TAPILAQASIA
Trigger: AGCAATGCTGGCCTGTGCCAGGATCGGAGCTGTCCACACAGTCATCTTTGCTGGCTTCAGTGCAGAGTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS CCA 72 bp TGGGATAAACTGGGGTGCTCTCAAAAAGGACGCTGGTaGCACCATTGCAGAGAGGCCCATACACCACGTAGC +
Preference number: 6 (lower is better)
Translates to: WDKLGCSQKGRW*HHCREAHTPRS
Trigger: GCTACGTGGTGTATGGGCCTCTCTGCAATGGTGCCACCAGCGTCCTTTTTGAGAGCACCCCAGTTTATCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS CCA 72 bp TTTGATGTCGTGGGGGTAGCCAATGACAGCACTTTCTaGTACTGCAGGGTGGTCGGCGATGGCGTCCTCAAT +
Preference number: 6 (lower is better)
Translates to: FDVVGVANDSTF*YCRVVGDGVLN
Trigger: ATTGAGGACGCCATCGCCGACCACCCTGCAGTACCAGAAAGTGCTGTCATTGGCTACCCCCACGACATCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323482.9
ENST00000537502.5
CDS CCA 72 bp CCTCATTCTGCATTCCCCCAGCATGTCGCTGTGCAGTaGGAACCACAGGTCAGATTCGTCCAAAGAGTCCCA +
Preference number: 6 (lower is better)
Translates to: PHSAFPQHVAVQ*EPQVRFVQRVP
Trigger: TGGGACTCTTTGGACGAATCTGACCTGTGGTTCCCACTGCACAGCGACATGCTGGGGGAATGCAGAATGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS CCA 72 bp GTGCTCTGTCTCTCCCTCGAAGCTTCTATATATGTGTaGCTCTCCTACTGCTCATCTGCCCCAGCCCCATGC +
Preference number: 6 (lower is better)
Translates to: VLCLSLEASIYV*LSYCSSAPAPC
Trigger: GCATGGGGCTGGGGCAGATGAGCAGTAGGAGAGCCACACATATATAGAAGCTTCGAGGGAGAGACAGAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS CAA 72 bp CGGTGCGAAGTGGAGGAAGTGGAAGCGATCCCAAGGTaGTCTTTCCTTTCGGCGCCTCATCCCTCTGAATCT +
Preference number: 6 (lower is better)
Translates to: RCEVEEVEAIPR*SFLSAPHPSES
Trigger: AGATTCAGAGGGATGAGGCGCCGAAAGGAAAGACAACCTTGGGATCGCTTCCACTTCCTCCACTTCGCACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537502.5
CDS CAA 90 bp GACCCAGCCACCAAGAAGCTGGCAGACTCGAAACAAAGCGTGGCCTaGGTAAAGGCCATTCTAGTCCCTCATTCTGCATTCCCCCAGCAT +
Preference number: 6 (lower is better)
Translates to: DPATKKLADSKQSVA*VKAILVPHSAFPQH
Trigger: ATGCTGGGGGAATGCAGAATGAGGGACTAGAATGGCCTTTACCAAGGCCACGCTTTGTTTCGAGTCTGCCAGCTTCTTGGTGGCTGGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS GCA 72 bp TCTCCCAGTACCGACCAGCATTGGGATAAACTGGGGTaGTCTCAAAAAGGACGCTGGTGGCACCATTGCAGA +
Preference number: 6 (lower is better)
Translates to: SPSTDQHWDKLG*SQKGRWWHHCR
Trigger: TCTGCAATGGTGCCACCAGCGTCCTTTTTGAGAGCACCCCAGTTTATCCCAATGCTGGTCGGTACTGGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS GCA 72 bp CTTGTCCTTGCACTTCTGGTAGACACTCAGGATCTCTaGGATGATGCTGGGGTCCTCCAAGGTGGTAGTGTC +
Preference number: 6 (lower is better)
Translates to: LVLALLVDTQDL*DDAGVLQGGSV
Trigger: GACACTACCACCTTGGAGGACCCCAGCATCATCGCAGAGATCCTGAGTGTCTACCAGAAGTGCAAGGACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000484396.1
ENST00000537502.5
CDS CCA 72 bp CATTGGGATAAACTGGGGTGCTCTCAAAAAGGACGCTaGTGGCACCATTGCAGAGAGGCCCATACACCACGT +
Preference number: 6 (lower is better)
Translates to: HWDKLGCSQKGR*WHHCREAHTPR
Trigger: ACGTGGTGTATGGGCCTCTCTGCAATGGTGCCACCAGCGTCCTTTTTGAGAGCACCCCAGTTTATCCCAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS CCA 72 bp GGCATCACCGTATTTCAGCAACAGCCGGACAGCCGTTaGGGCGCCATAGAACTGATTGATCTTCAACCTCTC +
Preference number: 6 (lower is better)
Translates to: GITVFQQQPDSR*GAIELIDLQPL
Trigger: GAGAGGTTGAAGATCAATCAGTTCTATGGCGCCCCAACGGCTGTCCGGCTGTTGCTGAAATACGGTGATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS CAA 72 bp CGTTTCACCACCAGGATCTCATCAGGCACAGCATATTaGGCGATCTTGGTGGCCACCATGGACTTGAGCTCC +
Preference number: 6 (lower is better)
Translates to: RFTTRISSGTAY*AILVATMDLSS
Trigger: GGAGCTCAAGTCCATGGTGGCCACCAAGATCGCCAAATATGCTGTGCCTGATGAGATCCTGGTGGTGAAACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000484396.1
ENST00000537502.5
CDS CAA 90 bp ACTATTTTCTTCAGCTCCACCACGCGCCCACCCCGGAGTCCTTGGTaGAAGGTGATAACCACCTTGCACTTGGCATCATTGATCCTCCCA +
Preference number: 6 (lower is better)
Translates to: TIFFSSTTRPPRSPW*KVITTLHLASLILP
Trigger: TGGGAGGATCAATGATGCCAAGTGCAAGGTGGTTATCACCTTCAACCAAGGACTCCGGGGTGGGCGCGTGGTGGAGCTGAAGAAAATAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS CAA 90 bp TCATCAGGCACAGCATATTTGGCGATCTTGGTGGCCACCATGGACTaGAGCTCCTGCACCACCACATCTGAGTCACCCGCACTATCTTTC +
Preference number: 6 (lower is better)
Translates to: SSGTAYLAILVATMD*SSCTTTSESPALSF
Trigger: GAAAGATAGTGCGGGTGACTCAGATGTGGTGGTGCAGGAGCTCAAGTCCATGGTGGCCACCAAGATCGCCAAATATGCTGTGCCTGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000484396.1
ENST00000537502.5
CDS GCA 72 bp TTCCTGACTCCACCCATGAATCTAGTTTATGGCACATaGTATGTGGGAACAGCTGTCAGTCCCCCTGCTGCC +
Preference number: 6 (lower is better)
Translates to: FLTPPMNLVYGT*YVGTAVSPPAA
Trigger: GGCAGCAGGGGGACTGACAGCTGTTCCCACATAGCATGTGCCATAAACTAGATTCATGGGTGGAGTCAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS GCA 72 bp AGCGATTCTAACAGCTCCACAGATGTTCCAGGTGAGTaGACATGTGTGGCTGAGAGCTTGGCATCTCAGCTC +
Preference number: 6 (lower is better)
Translates to: SDSNSSTDVPGE*TCVAESLASQL
Trigger: GAGCTGAGATGCCAAGCTCTCAGCCACACATGTGCACTCACCTGGAACATCTGTGGAGCTGTTAGAATCGCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS GCA 72 bp GGAGCCAACTCCCGAGGCAGGGTGCTATGCACAGACTaGCAGAAATCCGAAGGGCTTTTGAATCCTATGTTA +
Preference number: 6 (lower is better)
Translates to: GANSRGRVLCTD*QKSEGLLNPML
Trigger: TAACATAGGATTCAAAAGCCCTTCGGATTTCTGGCAGTCTGTGCATAGCACCCTGCCTCGGGAGTTGGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS GCA 72 bp ACTAGACAAGGAGCCAACTCCCGAGGCAGGGTGCTATaGACAGACTGCCAGAAATCCGAAGGGCTTTTGAAT +
Preference number: 6 (lower is better)
Translates to: TRQGANSRGRVL*TDCQKSEGLLN
Trigger: ATTCAAAAGCCCTTCGGATTTCTGGCAGTCTGTGCATAGCACCCTGCCTCGGGAGTTGGCTCCTTGTCTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS CCA 72 bp TACTGTCTCCCAGTACCGACCAGCATTGGGATAAACTaGGGTGCTCTCAAAAAGGACGCTGGTGGCACCATT +
Preference number: 6 (lower is better)
Translates to: YCLPVPTSIGIN*GALKKDAGGTI
Trigger: AATGGTGCCACCAGCGTCCTTTTTGAGAGCACCCCAGTTTATCCCAATGCTGGTCGGTACTGGGAGACAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS CAA 90 bp ATCCACTATTTTCTTCAGCTCCACCACGCGCCCACCCCGGAGTCCTaGGTTGAAGGTGATAACCACCTTGCACTTGGCATCATTGATCCT +
Preference number: 6 (lower is better)
Translates to: IHYFLQLHHAPTPES*VEGDNHLALGIIDP
Trigger: AGGATCAATGATGCCAAGTGCAAGGTGGTTATCACCTTCAACCAAGGACTCCGGGGTGGGCGCGTGGTGGAGCTGAAGAAAATAGTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000432802.6
ENST00000537502.5
CDS GCA 72 bp CAGATCAAAGCAACGCTCTCGGGGGACTTCCGAACATaGTGGTCCAAGCAGTTGACAGAGACATTTAACTGG +
Preference number: 6 (lower is better)
Translates to: QIKATLSGDFRT*WSKQLTETFNW
Trigger: CCAGTTAAATGTCTCTGTCAACTGCTTGGACCAGCATGTTCGGAAGTCCCCCGAGAGCGTTGCTTTGATCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000376726.3
ENST00000432802.6
CDS CCA 72 bp ATCAAAGCAACGCTCTCGGGGGACTTCCGAACATGCTaGTCCAAGCAGTTGACAGAGACATTTAACTGGCCT +
Preference number: 6 (lower is better)
Translates to: IKATLSGDFRTC*SKQLTETFNWP
Trigger: AGGCCAGTTAAATGTCTCTGTCAACTGCTTGGACCAGCATGTTCGGAAGTCCCCCGAGAGCGTTGCTTTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323482.9
ENST00000376726.3
ENST00000432802.6
CDS CCA 72 bp GAAGCCTTTCCTGACTCCACCCATGAATCTAGTTTATaGCACATGCTATGTGGGAACAGCTGTCAGTCCCCC +
Preference number: 6 (lower is better)
Translates to: EAFPDSTHESSL*HMLCGNSCQSP
Trigger: GGGGGACTGACAGCTGTTCCCACATAGCATGTGCCATAAACTAGATTCATGGGTGGAGTCAGGAAAGGCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS CCA 72 bp ACCAGCCTTTGGGGGTGTGTGTGCAACATGGTGCCATaGGCCAGGGTAGCTATTTCAGTTCAATTAAATCAG +
Preference number: 6 (lower is better)
Translates to: TSLWGCVCNMVP*ARVAISVQLNQ
Trigger: CTGATTTAATTGAACTGAAATAGCTACCCTGGCCCATGGCACCATGTTGCACACACACCCCCAAAGGCTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS CAA 90 bp CTGGCATGTTCCAGGAAGAGTTCACACTGTGAAGAGGGATCTAATTaGATTGTTGTCCATATAAGGAGTTGCTCATCCCGGTGCCATCCC +
Preference number: 6 (lower is better)
Translates to: LACSRKSSHCEEGSN*IVVHIRSCSSRCHP
Trigger: GGGATGGCACCGGGATGAGCAACTCCTTATATGGACAACAATCAAATTAGATCCCTCTTCACAGTGTGAACTCTTCCTGGAACATGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS CCA 72 bp GGTAGCTATTTCAGTTCAATTAAATCAGCAGCTCCCTaGCTGCATGAGCCACACTTCAAGTGCCATTCAGCA +
Preference number: 6 (lower is better)
Translates to: GSYFSSIKSAAP*LHEPHFKCHSA
Trigger: TGCTGAATGGCACTTGAAGTGTGGCTCATGCAGCCAGGGAGCTGCTGATTTAATTGAACTGAAATAGCTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS TCA 72 bp TGGCTTGAGTGCTATGACCAAGCCCGTGAGGATACATaGGGCTGGACATTTTCTCATAAACTCTCTGTAATG +
Preference number: 6 (lower is better)
Translates to: WLECYDQAREDT*GWTFSHKLSVM
Trigger: CATTACAGAGAGTTTATGAGAAAATGTCCAGCCTCATGTATCCTCACGGGCTTGGTCATAGCACTCAAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS CAA 72 bp TGTCTAAAGGTCACTTCCATTGTCCTTTCCTTGATCTaGCACTTGCTTTATGGAGTTCAATCCAGGGGCTGC +
Preference number: 6 (lower is better)
Translates to: CLKVTSIVLSLI*HLLYGVQSRGC
Trigger: GCAGCCCCTGGATTGAACTCCATAAAGCAAGTGCAAGATCAAGGAAAGGACAATGGAAGTGACCTTTAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS CAA 72 bp TCTGAACAAGCTATGATCTGTAAAGACCTACAGCCTTaGCCTGAAAGGCCTTCCTATATCCATGTGGCGAAC +
Preference number: 6 (lower is better)
Translates to: SEQAMICKDLQP*PERPSYIHVAN
Trigger: GTTCGCCACATGGATATAGGAAGGCCTTTCAGGCAAAGGCTGTAGGTCTTTACAGATCATAGCTTGTTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS CAA 72 bp TCCAGGAAGAGTTCACACTGTGAAGAGGGATCTAATTaGATTGTTGTCCATATAAGGAGTTGCTCATCCCGG +
Preference number: 6 (lower is better)
Translates to: SRKSSHCEEGSN*IVVHIRSCSSR
Trigger: CCGGGATGAGCAACTCCTTATATGGACAACAATCAAATTAGATCCCTCTTCACAGTGTGAACTCTTCCTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS CAA 90 bp GATTGGTTTTCTGAACAAGCTATGATCTGTAAAGACCTACAGCCTTaGCCTGAAAGGCCTTCCTATATCCATGTGGCGAACTCCTATTCA +
Preference number: 6 (lower is better)
Translates to: DWFSEQAMICKDLQP*PERPSYIHVANSYS
Trigger: TGAATAGGAGTTCGCCACATGGATATAGGAAGGCCTTTCAGGCAAAGGCTGTAGGTCTTTACAGATCATAGCTTGTTCAGAAAACCAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS TCA 72 bp GTGCATGAATGGATGATTGGTTTTCTGAACAAGCTATaGTCTGTAAAGACCTACAGCCTTTGCCTGAAAGGC +
Preference number: 6 (lower is better)
Translates to: VHEWMIGFLNKL*SVKTYSLCLKG
Trigger: GCCTTTCAGGCAAAGGCTGTAGGTCTTTACAGATCATAGCTTGTTCAGAAAACCAATCATCCATTCATGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484396.1
CDS CAA 72 bp AACGTTTGTCTAAAGGTCACTTCCATTGTCCTTTCCTaGATCTTGCACTTGCTTTATGGAGTTCAATCCAGG +
Preference number: 6 (lower is better)
Translates to: NVCLKVTSIVLS*ILHLLYGVQSR
Trigger: CCTGGATTGAACTCCATAAAGCAAGTGCAAGATCAAGGAAAGGACAATGGAAGTGACCTTTAGACAAACGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484396.1