RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ACSF3 (Homo sapiens)

Ensembl gene IDs: ENSG00000176715

Ensembl transcript IDs: ENST00000317447.9, ENST00000378345.8, ENST00000393145.5, ENST00000406948.7, ENST00000535176.1, ENST00000537116.5, ENST00000537290.5, ENST00000537895.5, ENST00000538340.5, ENST00000540697.5, ENST00000541755.2, ENST00000542688.5, ENST00000543676.1, ENST00000544543.5, ENST00000562750.1, ENST00000614302.5, ENST00000649953.1

Found 1456 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGAGGTGCCTCAGCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTaGACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGACACCAGGG +
Preference number: 1 (lower is better)
Translates to: GRCLSTWGQGLAAPR*TDEVGGDQAEVTPG
Trigger: CCCTGGTGTCACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGCTGAGGCACCTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
3UTR GCA 90 bp GGCGCGGTGCCACGGCTTTGGGGACCAGCTGGTCACCAGGAGTCCTaGCATCCCCTGGTGCCTGAGAGAAGCTGGGCCACCCGCCTGGGA +
Preference number: 1 (lower is better)
Translates to: GAVPRLWGPAGHQES*HPLVPERSWATRLG
Trigger: TCCCAGGCGGGTGGCCCAGCTTCTCTCAGGCACCAGGGGATGGCAGGACTCCTGGTGACCAGCTGGTCCCCAAAGCCGTGGCACCGCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR CCA 90 bp CCCCCTGGGTGGCTGCCCAGACCTCCTATGTGGGCCGGGAGACACTaGCTCTGGGTGAGGCACAGGCACGTGCAGACGGCGTGGGACAGG +
Preference number: 1 (lower is better)
Translates to: PPGWLPRPPMWAGRH*LWVRHRHVQTAWDR
Trigger: CCTGTCCCACGCCGTCTGCACGTGCCTGTGCCTCACCCAGAGCCAGTGTCTCCCGGCCCACATAGGAGGTCTGGGCAGCCACCCAGGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR TCA 90 bp CAAGGGCCGCTGTTGGGTGGGAACGTGGGGCCAGCTTGGCACTCCTaGGCTGCCTCAGGCCTGGCCTGTCTAGGCCTCAGTGGACCGGCC +
Preference number: 1 (lower is better)
Translates to: QGPLLGGNVGPAWHS*AASGLACLGLSGPA
Trigger: GGCCGGTCCACTGAGGCCTAGACAGGCCAGGCCTGAGGCAGCTCAGGAGTGCCAAGCTGGCCCCACGTTCCCACCCAACAGCGGCCCTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR GCA 90 bp GAGCAGAGGGGAACCAGGGGCCTGGCTGGGCACTGGCGGACTGTGTaGACGAAGGCCGACCAGCCTGGCACAGGGACCAGCTGGAGAGTC +
Preference number: 1 (lower is better)
Translates to: EQRGTRGLAGHWRTV*TKADQPGTGTSWRV
Trigger: GACTCTCCAGCTGGTCCCTGTGCCAGGCTGGTCGGCCTTCGTGCACACAGTCCGCCAGTGCCCAGCCAGGCCCCTGGTTCCCCTCTGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR GCA 90 bp GCCGCTGTTGGGTGGGAACGTGGGGCCAGCTTGGCACTCCTGAGCTaGCTCAGGCCTGGCCTGTCTAGGCCTCAGTGGACCGGCCAGCCT +
Preference number: 1 (lower is better)
Translates to: AAVGWERGASLALLS*LRPGLSRPQWTGQP
Trigger: AGGCTGGCCGGTCCACTGAGGCCTAGACAGGCCAGGCCTGAGGCAGCTCAGGAGTGCCAAGCTGGCCCCACGTTCCCACCCAACAGCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR CCA 90 bp GGGAGGGCGGGACCCCTTCCTCTGACTGTTCCCGGGGTCAGGCCATaGGGATGCACAAGGCCACACCGTGAGGCAGGAGTTCGGGTGGGG +
Preference number: 1 (lower is better)
Translates to: GRAGPLPLTVPGVRP*GCTRPHREAGVRVG
Trigger: CCCCACCCGAACTCCTGCCTCACGGTGTGGCCTTGTGCATCCCCATGGCCTGACCCCGGGAACAGTCAGAGGAAGGGGTCCCGCCCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR CCA 90 bp ACCTGGCAGGAAGGCAGCCCCAAGGGCCGCTGTTGGGTGGGAACGTaGGGCCAGCTTGGCACTCCTGAGCTGCCTCAGGCCTGGCCTGTC +
Preference number: 1 (lower is better)
Translates to: TWQEGSPKGRCWVGT*GQLGTPELPQAWPV
Trigger: GACAGGCCAGGCCTGAGGCAGCTCAGGAGTGCCAAGCTGGCCCCACGTTCCCACCCAACAGCGGCCCTTGGGGCTGCCTTCCTGCCAGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR GCA 90 bp GTCCGGGAGCCGTGGCTCCTCCAGGTTAGTGGTGCACACAGCGCTTaGCACACCGCCCACTGCCTCACTCCGTGCTGTGCCTGGTGCTGC +
Preference number: 1 (lower is better)
Translates to: VREPWLLQVSGAHSA*HTAHCLTPCCAWCC
Trigger: GCAGCACCAGGCACAGCACGGAGTGAGGCAGTGGGCGGTGTGGCAAGCGCTGTGTGCACCACTAACCTGGAGGAGCCACGGCTCCCGGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR CCA 90 bp GCTGGTCACCAGGAGTCCTGCCATCCCCTGGTGCCTGAGAGAAGCTaGGCCACCCGCCTGGGAGCAGCTCCTGGCAGCACCCCTGTGTCT +
Preference number: 1 (lower is better)
Translates to: AGHQESCHPLVPERS*ATRLGAAPGSTPVS
Trigger: AGACACAGGGGTGCTGCCAGGAGCTGCTCCCAGGCGGGTGGCCCAGCTTCTCTCAGGCACCAGGGGATGGCAGGACTCCTGGTGACCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR CCA 90 bp CACGGCTTTGGGGACCAGCTGGTCACCAGGAGTCCTGCCATCCCCTaGTGCCTGAGAGAAGCTGGGCCACCCGCCTGGGAGCAGCTCCTG +
Preference number: 1 (lower is better)
Translates to: HGFGDQLVTRSPAIP*CLREAGPPAWEQLL
Trigger: CAGGAGCTGCTCCCAGGCGGGTGGCCCAGCTTCTCTCAGGCACCAGGGGATGGCAGGACTCCTGGTGACCAGCTGGTCCCCAAAGCCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR CCA 90 bp GACCCTGGTGCCGCTGGGACAGAGTCCAGGTGGGAGGGCAGTGTGTaGTGTGTGTGTGGCCAGTCCCCAGGGACAGGACGCCCGAGGGAA +
Preference number: 1 (lower is better)
Translates to: DPGAAGTESRWEGSV*CVCGQSPGTGRPRE
Trigger: TTCCCTCGGGCGTCCTGTCCCTGGGGACTGGCCACACACACACCACACACTGCCCTCCCACCTGGACTCTGTCCCAGCGGCACCAGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR CCA 90 bp GTGTGTGGGACTTTGCTGGCAGCAGCAGGCGCGGTGCCACGGCTTTaGGGACCAGCTGGTCACCAGGAGTCCTGCCATCCCCTGGTGCCT +
Preference number: 1 (lower is better)
Translates to: VCGTLLAAAGAVPRL*GPAGHQESCHPLVP
Trigger: AGGCACCAGGGGATGGCAGGACTCCTGGTGACCAGCTGGTCCCCAAAGCCGTGGCACCGCGCCTGCTGCTGCCAGCAAAGTCCCACACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR CCA 90 bp CCAGCAAAGGAGGCCGGCAGCTTTGACACGAGGGTCCGGGAGCCGTaGCTCCTCCAGGTTAGTGGTGCACACAGCGCTTGCCACACCGCC +
Preference number: 1 (lower is better)
Translates to: PAKEAGSFDTRVREP*LLQVSGAHSACHTA
Trigger: GGCGGTGTGGCAAGCGCTGTGTGCACCACTAACCTGGAGGAGCCACGGCTCCCGGACCCTCGTGTCAAAGCTGCCGGCCTCCTTTGCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR GCA 90 bp GCTGGGACGCTGCTCTGTGGCCTCAGACAAGCTTGGTGGGCGACATaGTCAAGTGAGCAGGGGCCCCAGGCCACGTCCAACTGTCCGCGA +
Preference number: 1 (lower is better)
Translates to: AGTLLCGLRQAWWAT*SSEQGPQATSNCPR
Trigger: TCGCGGACAGTTGGACGTGGCCTGGGGCCCCTGCTCACTTGAGCATGTCGCCCACCAAGCTTGTCTGAGGCCACAGAGCAGCGTCCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR GCA 90 bp TGCCACAGGCTGTGTGTGGGACTTTGCTGGCAGCAGCAGGCGCGGTaGCACGGCTTTGGGGACCAGCTGGTCACCAGGAGTCCTGCCATC +
Preference number: 1 (lower is better)
Translates to: CHRLCVGLCWQQQAR*HGFGDQLVTRSPAI
Trigger: GATGGCAGGACTCCTGGTGACCAGCTGGTCCCCAAAGCCGTGGCACCGCGCCTGCTGCTGCCAGCAAAGTCCCACACACAGCCTGTGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR GCA 90 bp CTCCTCCAGGTTAGTGGTGCACACAGCGCTTGCCACACCGCCCACTaGCTCACTCCGTGCTGTGCCTGGTGCTGCGTGGGTCCTGAGGCT +
Preference number: 1 (lower is better)
Translates to: LLQVSGAHSACHTAH*LTPCCAWCCVGPEA
Trigger: AGCCTCAGGACCCACGCAGCACCAGGCACAGCACGGAGTGAGGCAGTGGGCGGTGTGGCAAGCGCTGTGTGCACCACTAACCTGGAGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR CCA 90 bp GCAGGGCCGTGGACTGGGGCACCCACCAGTCCTGGAAAACAGGGCTaGGACGCTGCTCTGTGGCCTCAGACAAGCTTGGTGGGCGACATG +
Preference number: 1 (lower is better)
Translates to: AGPWTGAPTSPGKQG*DAALWPQTSLVGDM
Trigger: CATGTCGCCCACCAAGCTTGTCTGAGGCCACAGAGCAGCGTCCCAGCCCTGTTTTCCAGGACTGGTGGGTGCCCCAGTCCACGGCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR CCA 90 bp GGCAGAGCAGGTGCTCAGAGGCAGGAGTGTCAGCTGACTGACACCTaGAGAGGGCTGCACAGCCACGGGGCGTCTCACTCCTCCACACGC +
Preference number: 1 (lower is better)
Translates to: GRAGAQRQECQLTDT*RGLHSHGASHSSTR
Trigger: GCGTGTGGAGGAGTGAGACGCCCCGTGGCTGTGCAGCCCTCTCCAGGTGTCAGTCAGCTGACACTCCTGCCTCTGAGCACCTGCTCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543676.1
3UTR CCA 90 bp CTGAGGCAGAGCAGGCTCAGGTCTTGTGTGTTGGGCCTGGACACCTaGCAGGAAGGCAGCCCCAAGGGCCGCTGTTGGGTGGGAACGTGG +
Preference number: 1 (lower is better)
Translates to: LRQSRLRSCVLGLDT*QEGSPKGRCWVGTW
Trigger: CCACGTTCCCACCCAACAGCGGCCCTTGGGGCTGCCTTCCTGCCAGGTGTCCAGGCCCAACACACAAGACCTGAGCCTGCTCTGCCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR TCA 90 bp GCTGCTCTGTGGCCTCAGACAAGCTTGGTGGGCGACATGCTCAAGTaGGCAGGGGCCCCAGGCCACGTCCAACTGTCCGCGAGGCATGTG +
Preference number: 1 (lower is better)
Translates to: AALWPQTSLVGDMLK*AGAPGHVQLSARHV
Trigger: CACATGCCTCGCGGACAGTTGGACGTGGCCTGGGGCCCCTGCTCACTTGAGCATGTCGCCCACCAAGCTTGTCTGAGGCCACAGAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR CCA 90 bp CTGGGCCACCCGCCTGGGAGCAGCTCCTGGCAGCACCCCTGTGTCTaGCTGGGGTCAGAACTGGTGACTTTCCAGATTCAAGCCAGCCTC +
Preference number: 1 (lower is better)
Translates to: LGHPPGSSSWQHPCV*LGSELVTFQIQASL
Trigger: GAGGCTGGCTTGAATCTGGAAAGTCACCAGTTCTGACCCCAGCCAGACACAGGGGTGCTGCCAGGAGCTGCTCCCAGGCGGGTGGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR CCA 90 bp TGCTACCGCGGTCGTCCATCCCGTGCTCTTGTCTGTGCCGGCAGCTaGCAGGAGATGCTGCGGCCGTCGTGCGTGATGGATCATGAGGTG +
Preference number: 1 (lower is better)
Translates to: CYRGRPSRALVCAGS*QEMLRPSCVMDHEV
Trigger: CACCTCATGATCCATCACGCACGACGGCCGCAGCATCTCCTGCCAGCTGCCGGCACAGACAAGAGCACGGGATGGACGACCGCGGTAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR TCA 90 bp CATTTCCGGCAGAGCAGGTGCTCAGAGGCAGGAGTGTCAGCTGACTaGCACCTGGAGAGGGCTGCACAGCCACGGGGCGTCTCACTCCTC +
Preference number: 1 (lower is better)
Translates to: HFRQSRCSEAGVSAD*HLERAAQPRGVSLL
Trigger: GAGGAGTGAGACGCCCCGTGGCTGTGCAGCCCTCTCCAGGTGTCAGTCAGCTGACACTCCTGCCTCTGAGCACCTGCTCTGCCGGAAATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543676.1
3UTR GCA 90 bp TACCAGCAAGGCCTAGACACAAACGTCTGGACTGTAGTCTCTGACTaGCGTTCCCTTGGGTCCAGGCCTCTGGCGGGAGGGCGGGACCCC +
Preference number: 1 (lower is better)
Translates to: YQQGLDTNVWTVVSD*RSLGSRPLAGGRDP
Trigger: GGGGTCCCGCCCTCCCGCCAGAGGCCTGGACCCAAGGGAACGGCAGTCAGAGACTACAGTCCAGACGTTTGTGTCTAGGCCTTGCTGGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR CCA 90 bp GGGCCCTATCTGTTAAACGAATGGAGGAGGCAGGAGCTGGGTCCATaGTCTCCCTGCCAGGGAAGCCGCAGGTGGAGGGAAGGCAGAGGG +
Preference number: 1 (lower is better)
Translates to: GPYLLNEWRRQELGP*SPCQGSRRWREGRG
Trigger: CCCTCTGCCTTCCCTCCACCTGCGGCTTCCCTGGCAGGGAGACCATGGACCCAGCTCCTGCCTCCTCCATTCGTTTAACAGATAGGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR TCA 90 bp GGCCAGGACATTTCTGGCCCACTCTTTGAGCTCCCTGTGGGACAGTaGGTGTCCTTCTCGGAGGGTCACCACAGCAGTGACCCGCTGGCC +
Preference number: 1 (lower is better)
Translates to: GQDISGPLFELPVGQ*VSFSEGHHSSDPLA
Trigger: GGCCAGCGGGTCACTGCTGTGGTGACCCTCCGAGAAGGACACTCACTGTCCCACAGGGAGCTCAAAGAGTGGGCCAGAAATGTCCTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542688.5
3UTR TCA 90 bp GTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGTCTGCCGGGTCATaGGGGGTGGAAGTGCCTGATGAGCGCCTTCTTGTCAATCTTGCC +
Preference number: 1 (lower is better)
Translates to: VCCSPPDPQSQSAGS*GVEVPDERLLVNLA
Trigger: GGCAAGATTGACAAGAAGGCGCTCATCAGGCACTTCCACCCCTCATGACCCGGCAGACTGGGACTGCGGGTCTGGTGGGGAGCAGCAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542688.5
3UTR GCA 90 bp GGTCTCCTGTCAGAGGCACGTGAGCCTGAGATGGGGCTGGCCTCCTaGCCGGCACACTCGTTTCTGGCCACTCTTTCAGACGTGCATTCC +
Preference number: 1 (lower is better)
Translates to: GLLSEAREPEMGLAS*PAHSFLATLSDVHS
Trigger: GGAATGCACGTCTGAAAGAGTGGCCAGAAACGAGTGTGCCGGGCAGGAGGCCAGCCCCATCTCAGGCTCACGTGCCTCTGACAGGAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR GCA 90 bp GTGGACTGGGGCACCCACCAGTCCTGGAAAACAGGGCTGGGACGCTaGTCTGTGGCCTCAGACAAGCTTGGTGGGCGACATGCTCAAGTG +
Preference number: 1 (lower is better)
Translates to: VDWGTHQSWKTGLGR*SVASDKLGGRHAQV
Trigger: CACTTGAGCATGTCGCCCACCAAGCTTGTCTGAGGCCACAGAGCAGCGTCCCAGCCCTGTTTTCCAGGACTGGTGGGTGCCCCAGTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR CCA 90 bp GTGAGCCTGAGATGGGGCTGGCCTCCTGCCCGGCACACTCGTTTCTaGCCACTCTTTCAGACGTGCATTCCGGGGGCAGAATGTTCTGGG +
Preference number: 1 (lower is better)
Translates to: VSLRWGWPPARHTRF*PLFQTCIPGAECSG
Trigger: CCCAGAACATTCTGCCCCCGGAATGCACGTCTGAAAGAGTGGCCAGAAACGAGTGTGCCGGGCAGGAGGCCAGCCCCATCTCAGGCTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR CCA 90 bp GGGTGGAAGTGCCTGATGAGCGCCTTCTTGTCAATCTTGCCCATCTaGTTCCGCGGGATCTCCTCCACCAGCACCAGCTCCGAGGGCACC +
Preference number: 1 (lower is better)
Translates to: GWKCLMSAFLSILPI*FRGISSTSTSSEGT
Trigger: GGTGCCCTCGGAGCTGGTGCTGGTGGAGGAGATCCCGCGGAACCAGATGGGCAAGATTGACAAGAAGGCGCTCATCAGGCACTTCCACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542688.5
3UTR CCA 90 bp GCTCCCCACCAGACCCGCAGTCCCAGTCTGCCGGGTCATGAGGGGTaGAAGTGCCTGATGAGCGCCTTCTTGTCAATCTTGCCCATCTGG +
Preference number: 1 (lower is better)
Translates to: APHQTRSPSLPGHEG*KCLMSAFLSILPIW
Trigger: CCAGATGGGCAAGATTGACAAGAAGGCGCTCATCAGGCACTTCCACCCCTCATGACCCGGCAGACTGGGACTGCGGGTCTGGTGGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542688.5
3UTR GCA 90 bp CACACTCACCACCTTCTCACTGTGGCTGGCAACAAGCTGCTGTTCTaGACCAGGACCTCCTCTCAGGCTCCCAGCAAAGGAGGCCGGCAG +
Preference number: 1 (lower is better)
Translates to: HTHHLLTVAGNKLLF*TRTSSQAPSKGGRQ
Trigger: CTGCCGGCCTCCTTTGCTGGGAGCCTGAGAGGAGGTCCTGGTGCAGAACAGCAGCTTGTTGCCAGCCACAGTGAGAAGGTGGTGAGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR CCA 90 bp GCGTACGGGGCCAGGACATTTCTGGCCCACTCTTTGAGCTCCCTGTaGGACAGTGAGTGTCCTTCTCGGAGGGTCACCACAGCAGTGACC +
Preference number: 1 (lower is better)
Translates to: AYGARTFLAHSLSSL*DSECPSRRVTTAVT
Trigger: GGTCACTGCTGTGGTGACCCTCCGAGAAGGACACTCACTGTCCCACAGGGAGCTCAAAGAGTGGGCCAGAAATGTCCTGGCCCCGTACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542688.5
3UTR CCA 90 bp GCAGCCGACTGTAGCTTTGCTCTTGGACGGGGAACATCCACTGGCTaGGGTCAGTGCACACCGCACAGAGTGACGGGCTTCCTGCTCAGA +
Preference number: 1 (lower is better)
Translates to: AADCSFALGRGTSTG*GQCTPHRVTGFLLR
Trigger: TCTGAGCAGGAAGCCCGTCACTCTGTGCGGTGTGCACTGACCCCAGCCAGTGGATGTTCCCCGTCCAAGAGCAAAGCTACAGTCGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR TCA 90 bp AGCAGCTCCGGGGCCATCCGTCCACGCACTTTCTGTGACACATGCTaGTGGACACACAGTAGTGTGCAGGGTGGCAGGTGTCCCCACAGT +
Preference number: 1 (lower is better)
Translates to: SSSGAIRPRTFCDTC*WTHSSVQGGRCPHS
Trigger: ACTGTGGGGACACCTGCCACCCTGCACACTACTGTGTGTCCATCAGCATGTGTCACAGAAAGTGCGTGGACGGATGGCCCCGGAGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR TCA 90 bp CCCTGTGGGACAGTGAGTGTCCTTCTCGGAGGGTCACCACAGCAGTaGCCCGCTGGCCCCATGTCATATCCGGAACTCCAATCACAGCCA +
Preference number: 1 (lower is better)
Translates to: PCGTVSVLLGGSPQQ*PAGPMSYPELQSQP
Trigger: TGGCTGTGATTGGAGTTCCGGATATGACATGGGGCCAGCGGGTCACTGCTGTGGTGACCCTCCGAGAAGGACACTCACTGTCCCACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542688.5
3UTR TCA 90 bp CGGCAGCTGGCAGGAGATGCTGCGGCCGTCGTGCGTGATGGATCATaGGGTGCAGTCACGGATGTTTATCCTCCAGTGACCTCGTCTCTC +
Preference number: 1 (lower is better)
Translates to: RQLAGDAAAVVRDGS*GAVTDVYPPVTSSL
Trigger: GAGAGACGAGGTCACTGGAGGATAAACATCCGTGACTGCACCTCATGATCCATCACGCACGACGGCCGCAGCATCTCCTGCCAGCTGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR GCA 90 bp TCCCCACAGTGGGAGCTGCTCTCCTCCAAGAGCAGCACCAGGAAATaGACGGAACCCATGGGACAGGGCTGGTTCTGGGAGGCTTGTGAA +
Preference number: 1 (lower is better)
Translates to: SPQWELLSSKSSTRK*TEPMGQGWFWEACE
Trigger: TTCACAAGCCTCCCAGAACCAGCCCTGTCCCATGGGTTCCGTGCATTTCCTGGTGCTGCTCTTGGAGGAGAGCAGCTCCCACTGTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR CCA 90 bp CGGACTGTGTGCACGAAGGCCGACCAGCCTGGCACAGGGACCAGCTaGAGAGTCACTCGTGACTTTAGAACACGGCATTCAACCGCATGT +
Preference number: 1 (lower is better)
Translates to: RTVCTKADQPGTGTS*RVTRDFRTRHSTAC
Trigger: ACATGCGGTTGAATGCCGTGTTCTAAAGTCACGAGTGACTCTCCAGCTGGTCCCTGTGCCAGGCTGGTCGGCCTTCGTGCACACAGTCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR CCA 90 bp CCCGGCCTGTGTCTCCAGAGGCCAGGTCAGCACCAGAGGCCAAGATaGGGAATAAACTGGGCTTTAATGGGGAGGGAGGAGAGGATGAGT +
Preference number: 1 (lower is better)
Translates to: PGLCLQRPGQHQRPR*GINWALMGREERMS
Trigger: ACTCATCCTCTCCTCCCTCCCCATTAAAGCCCAGTTTATTCCCCATCTTGGCCTCTGGTGCTGACCTGGCCTCTGGAGACACAGGCCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR TCA 90 bp AGTAAATGCAACGTGGGTGCACCCAACATTCACAACACACCTTCCTaGGGTTTCTGCATCGGCCACGCCTGTGGGCTCCGGAGCTGGGTC +
Preference number: 1 (lower is better)
Translates to: SKCNVGAPNIHNTPS*GFCIGHACGLRSWV
Trigger: GACCCAGCTCCGGAGCCCACAGGCGTGGCCGATGCAGAAACCTCAGGAAGGTGTGTTGTGAATGTTGGGTGCACCCACGTTGCATTTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR TCA 90 bp GGGCAGAATGTTCTGGGTAAGTTCAGGCCAGACACTGCTGGGCGATaGCTGTTACTTCCCCCAGGCTGTGGGGAGGAGGCAGCCTATTCT +
Preference number: 1 (lower is better)
Translates to: GQNVLGKFRPDTAGR*LLLPPGCGEEAAYS
Trigger: AGAATAGGCTGCCTCCTCCCCACAGCCTGGGGGAAGTAACAGTCATCGCCCAGCAGTGTCTGGCCTGAACTTACCCAGAACATTCTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR TCA 90 bp CTCCAGGGCGCTGACCTTGTAGCCTCCAGTCTTGATGATGTCCACTaGGGTCCGGCCTCGGATCCAGTACTGGCCATCCTTAAACACCAC +
Preference number: 1 (lower is better)
Translates to: LQGADLVASSLDDVH*GPASDPVLAILKHH
Trigger: GTGGTGTTTAAGGATGGCCAGTACTGGATCCGAGGCCGGACCTCAGTGGACATCATCAAGACTGGAGGCTACAAGGTCAGCGCCCTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542688.5
3UTR GCA 90 bp GTCCACGCACTTTCTGTGACACATGCTGATGGACACACAGTAGTGTaGAGGGTGGCAGGTGTCCCCACAGTGGGAGCTGCTCTCCTCCAA +
Preference number: 1 (lower is better)
Translates to: VHALSVTHADGHTVV*RVAGVPTVGAALLQ
Trigger: TTGGAGGAGAGCAGCTCCCACTGTGGGGACACCTGCCACCCTGCACACTACTGTGTGTCCATCAGCATGTGTCACAGAAAGTGCGTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR CCA 90 bp GACAGTGAGTGTCCTTCTCGGAGGGTCACCACAGCAGTGACCCGCTaGCCCCATGTCATATCCGGAACTCCAATCACAGCCACATCTGTG +
Preference number: 1 (lower is better)
Translates to: DSECPSRRVTTAVTR*PHVISGTPITATSV
Trigger: CACAGATGTGGCTGTGATTGGAGTTCCGGATATGACATGGGGCCAGCGGGTCACTGCTGTGGTGACCCTCCGAGAAGGACACTCACTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542688.5
3UTR CCA 90 bp TGGTTAACTCAGTGGCTGGCACACTCACCACCTTCTCACTGTGGCTaGCAACAAGCTGCTGTTCTGCACCAGGACCTCCTCTCAGGCTCC +
Preference number: 1 (lower is better)
Translates to: WLTQWLAHSPPSHCG*QQAAVLHQDLLSGS
Trigger: GGAGCCTGAGAGGAGGTCCTGGTGCAGAACAGCAGCTTGTTGCCAGCCACAGTGAGAAGGTGGTGAGTGTGCCAGCCACTGAGTTAACCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR TCA 90 bp TGTGGCTGCTGTGGTCCACACCTGTCTGCACACGCCTCCTGTTACTaGTGGTTAACTCAGTGGCTGGCACACTCACCACCTTCTCACTGT +
Preference number: 1 (lower is better)
Translates to: CGCCGPHLSAHASCY*WLTQWLAHSPPSHC
Trigger: ACAGTGAGAAGGTGGTGAGTGTGCCAGCCACTGAGTTAACCATCAGTAACAGGAGGCGTGTGCAGACAGGTGTGGACCACAGCAGCCACA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR CCA 90 bp GACACCAGGGACGGTCTCCTTGAGCTGCAACAACTGGCCCGAGGCTaGGGACCCCACATGGTGATTTCATCCCAAACAGTTCTTGATTCT +
Preference number: 1 (lower is better)
Translates to: DTRDGLLELQQLARG*GPHMVISSQTVLDS
Trigger: AGAATCAAGAACTGTTTGGGATGAAATCACCATGTGGGGTCCCCAGCCTCGGGCCAGTTGTTGCAGCTCAAGGAGACCGTCCCTGGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
3UTR TCA 90 bp TGCGTGATGGATCATGAGGTGCAGTCACGGATGTTTATCCTCCAGTaGCCTCGTCTCTCTTGTGGCTGCTGTGGTCCACACCTGTCTGCA +
Preference number: 1 (lower is better)
Translates to: CVMDHEVQSRMFILQ*PRLSCGCCGPHLSA
Trigger: TGCAGACAGGTGTGGACCACAGCAGCCACAAGAGAGACGAGGTCACTGGAGGATAAACATCCGTGACTGCACCTCATGATCCATCACGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR CCA 90 bp AGAAGGCATTTCCTTAGCTACCAGCAAGGCCTAGACACAAACGTCTaGACTGTAGTCTCTGACTGCCGTTCCCTTGGGTCCAGGCCTCTG +
Preference number: 1 (lower is better)
Translates to: RRHFLSYQQGLDTNV*TVVSDCRSLGSRPL
Trigger: CAGAGGCCTGGACCCAAGGGAACGGCAGTCAGAGACTACAGTCCAGACGTTTGTGTCTAGGCCTTGCTGGTAGCTAAGGAAATGCCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR CCA 90 bp AGAGTCACTCGTGACTTTAGAACACGGCATTCAACCGCATGTCCTTaGAGCACCGTATTCTGGTCAACCGGCTGGTCAACGAGCTCCAGG +
Preference number: 1 (lower is better)
Translates to: RVTRDFRTRHSTACP*STVFWSTGWSTSSR
Trigger: CCTGGAGCTCGTTGACCAGCCGGTTGACCAGAATACGGTGCTCCAAGGACATGCGGTTGAATGCCGTGTTCTAAAGTCACGAGTGACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR CCA 90 bp TTTCTGGCCACTCTTTCAGACGTGCATTCCGGGGGCAGAATGTTCTaGGTAAGTTCAGGCCAGACACTGCTGGGCGATGACTGTTACTTC +
Preference number: 1 (lower is better)
Translates to: FLATLSDVHSGGRMF*VSSGQTLLGDDCYF
Trigger: GAAGTAACAGTCATCGCCCAGCAGTGTCTGGCCTGAACTTACCCAGAACATTCTGCCCCCGGAATGCACGTCTGAAAGAGTGGCCAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR CCA 90 bp CATTCAACCGCATGTCCTTGGAGCACCGTATTCTGGTCAACCGGCTaGTCAACGAGCTCCAGGCTTTCTGTAGTTTGTGGTCAACGAGCT +
Preference number: 1 (lower is better)
Translates to: HSTACPWSTVFWSTG*STSSRLSVVCGQRA
Trigger: AGCTCGTTGACCACAAACTACAGAAAGCCTGGAGCTCGTTGACCAGCCGGTTGACCAGAATACGGTGCTCCAAGGACATGCGGTTGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR CCA 90 bp TTTAGAACACGGCATTCAACCGCATGTCCTTGGAGCACCGTATTCTaGTCAACCGGCTGGTCAACGAGCTCCAGGCTTTCTGTAGTTTGT +
Preference number: 1 (lower is better)
Translates to: FRTRHSTACPWSTVF*STGWSTSSRLSVVC
Trigger: ACAAACTACAGAAAGCCTGGAGCTCGTTGACCAGCCGGTTGACCAGAATACGGTGCTCCAAGGACATGCGGTTGAATGCCGTGTTCTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR CCA 90 bp CATCTGGGCCTACGATCCAGTGATTCCACCTGCAGGAATATCTTCTaGAGAAATTCTTCCACTGTGCAAAAGTCACTGCACCTGCAGCCG +
Preference number: 1 (lower is better)
Translates to: HLGLRSSDSTCRNIF*RNSSTVQKSLHLQP
Trigger: CGGCTGCAGGTGCAGTGACTTTTGCACAGTGGAAGAATTTCTCCAGAAGATATTCCTGCAGGTGGAATCACTGGATCGTAGGCCCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR CCA 90 bp TGTCTTAAACCAGCCATCCAGGGTGAATGCACTCTTAGTTTCTTCTaGTTTATTCCAGTATTCTCGAAACACGGAGGGTCCCCTCACCAG +
Preference number: 1 (lower is better)
Translates to: CLKPAIQGECTLSFF*FIPVFSKHGGSPHQ
Trigger: CTGGTGAGGGGACCCTCCGTGTTTCGAGAATACTGGAATAAACCAGAAGAAACTAAGAGTGCATTCACCCTGGATGGCTGGTTTAAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542688.5
3UTR GCA 90 bp AAACACCACGGTGTCCCCTGTCTTAAACCAGCCATCCAGGGTGAATaGACTCTTAGTTTCTTCTGGTTTATTCCAGTATTCTCGAAACAC +
Preference number: 1 (lower is better)
Translates to: KHHGVPCLKPAIQGE*TLSFFWFIPVFSKH
Trigger: GTGTTTCGAGAATACTGGAATAAACCAGAAGAAACTAAGAGTGCATTCACCCTGGATGGCTGGTTTAAGACAGGGGACACCGTGGTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542688.5
3UTR TCA 90 bp AATATTGACCAACCCAACAGGAAATGGGCAAAGAACTGGAACAGGTaGCTTGCAGGAAAATCAAATGGCCCAGAAACATATTCGAGATGT +
Preference number: 1 (lower is better)
Translates to: NIDQPNRKWAKNWNR*LAGKSNGPETYSRC
Trigger: ACATCTCGAATATGTTTCTGGGCCATTTGATTTTCCTGCAAGTCACCTGTTCCAGTTCTTTGCCCATTTCCTGTTGGGTTGGTCAATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR-3UTR GCA 90 bp GCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGCTGTGGGGCGGGAGGTaGCTCAGCACGTGGGGCCAG +
Preference number: 2 (lower is better)
Translates to: ARGARGWLHRAAQMRSAVLWGGR*LSTWGQ
Trigger: CTGGCCCCACGTGCTGAGGCACCTCCCGCCCCACAG...CACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR GCA 90 bp ACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCTGTGGGGCGGGAGGTaGCTCAGCACGTGGGGCCAG +
Preference number: 2 (lower is better)
Translates to: TWGQGLAAPRCTDEVGGDLWGGR*LSTWGQ
Trigger: CTGGCCCCACGTGCTGAGGCACCTCCCGCCCCACAG...GTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR GCA 90 bp GTCTCTGACTGCCGTTCCCTTGGGTCCAGGCCTCTGGCGGGAGGGCGGGACCCCGAAGGGGACGTCTGCTaGTCCCCACCAGACCCGCAG +
Preference number: 2 (lower is better)
Translates to: VSDCRSLGSRPLAGGRDPEGDVC*SPPDPQ
Trigger: CTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTC...GGGGTCCCGCCCTCCCGCCAGAGGCCTGGACCCAAGGGAACGGCAGTCAGAGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR GCA 90 bp ACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACGAAGGGGACGTCTGCTaGTCCCCACCAGACCCGCAG +
Preference number: 2 (lower is better)
Translates to: TWGQGLAAPRCTDEVGGDEGDVC*SPPDPQ
Trigger: CTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTC...GTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR GCA 90 bp TGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGTCTGCCGGGCTGTGGGGCGGGAGGTaGCTCAGCACGTGGGGCCAG +
Preference number: 2 (lower is better)
Translates to: CEGDVCCSPPDPQSQSAGLWGGR*LSTWGQ
Trigger: CTGGCCCCACGTGCTGAGGCACCTCCCGCCCCACAG...CCCGGCAGACTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp AGCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTAGGGAGGCCAGGTCTTaGACGGGCCCCCGTGGTTCT +
Preference number: 2 (lower is better)
Translates to: STWGQGLAAPRCTDEVGGREARS*TGPRGS
Trigger: AGAACCACGGGGGCCCGTCCAAGACCTGGCCTCCCT...ACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp AGCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTAACTGCAGGGCACTGTaGGGCGGGAGGTGCCTCAGC +
Preference number: 2 (lower is better)
Translates to: STWGQGLAAPRCTDEVGGNCRAL*GGRCLS
Trigger: GCTGAGGCACCTCCCGCCCCACAGTGCCCTGCAGTT...ACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp GCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGCTGCCCTGGAGAGCCTaGCAACTGCAGGGCACTGTG +
Preference number: 2 (lower is better)
Translates to: ARGARGWLHRAAQMRSAVLPWRA*QLQGTV
Trigger: CACAGTGCCCTGCAGTTGCCAGGCTCTCCAGGGCAG...CACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp GCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGCTCTGGGACCTGCCCTaGAGAGCCTGGCAACTGCAG +
Preference number: 2 (lower is better)
Translates to: ARGARGWLHRAAQMRSAVLWDLP*RAWQLQ
Trigger: CTGCAGTTGCCAGGCTCTCCAGGGCAGGTCCCAGAG...CACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp GCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGCCCAGACCTCCTATGTaGGCCGGGAGACACTGGCTC +
Preference number: 2 (lower is better)
Translates to: ARGARGWLHRAAQMRSAVPRPPM*AGRHWL
Trigger: GAGCCAGTGTCTCCCGGCCCACATAGGAGGTCTGGG...CACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR TCA 90 bp GCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGCCGTGGTTCTCGGTGTaGAGGGGACGTCTGCTGCTC +
Preference number: 2 (lower is better)
Translates to: ARGWLHRAAQMRSAVTRQPWFSV*RGRLLL
Trigger: GAGCAGCAGACGTCCCCTTCACACCGAGAACCACGG...CTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR TCA 90 bp ACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGGACGGTCTCCTTaGGCTGCAACAACTGGCCCG +
Preference number: 2 (lower is better)
Translates to: TWGQGLAAPRCTDEVGGDQGRSP*AATTGP
Trigger: CGGGCCAGTTGTTGCAGCTCAAGGAGACCGTCCCTG...GTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR TCA 90 bp ACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCCACCTCCAGGGCGCTaGCCTTGTAGCCTCCAGTCT +
Preference number: 2 (lower is better)
Translates to: TWGQGLAAPRCTDEVGGDPPPGR*PCSLQS
Trigger: AGACTGGAGGCTACAAGGTCAGCGCCCTGGAGGTGG...GTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542688.5
3UTR-3UTR GCA 90 bp AGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGGAAGGGGACGTCTGCTaGTCCCCACCAGACCCGCAG +
Preference number: 2 (lower is better)
Translates to: RGWLHRAAQMRSAVTRQREGDVC*SPPDPQ
Trigger: CTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTC...CCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR GCA 90 bp GACTGCCGTTCCCTTGGGTCCAGGCCTCTGGCGGGAGGGCGGGACCCCTTCCTCTGTGAAGGGGACGTCTaGTGCTCCCCACCAGACCCG +
Preference number: 2 (lower is better)
Translates to: DCRSLGSRPLAGGRDPFLCEGDV*CSPPDP
Trigger: CGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACA...GAGGAAGGGGTCCCGCCCTCCCGCCAGAGGCCTGGACCCAAGGGAACGGCAGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR GCA 90 bp AGGGCCGTGGACTGGGGCACCCACCAGTCCTGGAAAACAGGGCTGGGACGCTGCGGAGAGCCTGGCAACTaGAGGGCACTGTGGGGCGGG +
Preference number: 2 (lower is better)
Translates to: RAVDWGTHQSWKTGLGRCGEPGN*RALWGG
Trigger: CCCGCCCCACAGTGCCCTGCAGTTGCCAGGCTCTCC...GCAGCGTCCCAGCCCTGTTTTCCAGGACTGGTGGGTGCCCCAGTCCACGGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR GCA 90 bp GCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGGAAACCTCTGGGACCTaGCCTGGAGAGCCTGGCAAC +
Preference number: 2 (lower is better)
Translates to: ARGARGWLHRAAQMRSAVETSGT*PGEPGN
Trigger: GTTGCCAGGCTCTCCAGGGCAGGTCCCAGAGGTTTC...CACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp AGCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTTTGAGCTGCAACAACTaGCCCGAGGCTGGGGACCCC +
Preference number: 2 (lower is better)
Translates to: STWGQGLAAPRCTDEVGGLSCNN*PEAGDP
Trigger: GGGGTCCCCAGCCTCGGGCCAGTTGTTGCAGCTCAA...ACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp ACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCTCTGGGACCTGCCCTaGAGAGCCTGGCAACTGCAG +
Preference number: 2 (lower is better)
Translates to: TWGQGLAAPRCTDEVGGDLWDLP*RAWQLQ
Trigger: CTGCAGTTGCCAGGCTCTCCAGGGCAGGTCCCAGAG...GTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR TCA 90 bp AGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGCCGTGGTTCTCGGTGTaGAGGGGACGTCTGCTGCTC +
Preference number: 2 (lower is better)
Translates to: RGWLHRAAQMRSAVTRQRPWFSV*RGRLLL
Trigger: GAGCAGCAGACGTCCCCTTCACACCGAGAACCACGG...CCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR TCA 90 bp ACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACGTTCTGGGAGGCTTGTaGACCCTCAGCTCCTCCCAG +
Preference number: 2 (lower is better)
Translates to: TWGQGLAAPRCTDEVGGDVLGGL*TLSSSQ
Trigger: CTGGGAGGAGCTGAGGGTTCACAAGCCTCCCAGAAC...GTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR GCA 90 bp GGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGTGTGAAGGGGACGTCTaGTGCTCCCCACCAGACCCG +
Preference number: 2 (lower is better)
Translates to: GLAAPRCTDEVGGDQAEVCEGDV*CSPPDP
Trigger: CGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACA...CACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR GCA 90 bp AGGGCCGTGGACTGGGGCACCCACCAGTCCTGGAAAACAGGGCTGGGACGCTGCCTGGCTGCACCGCGCTaGACAGATGAGGTCGGCGGT +
Preference number: 2 (lower is better)
Translates to: RAVDWGTHQSWKTGLGRCLAAPR*TDEVGG
Trigger: ACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAG...GCAGCGTCCCAGCCCTGTTTTCCAGGACTGGTGGGTGCCCCAGTCCACGGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR GCA 90 bp AGCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGAAACCTCTGGGACCTaGCCTGGAGAGCCTGGCAAC +
Preference number: 2 (lower is better)
Translates to: STWGQGLAAPRCTDEVGGETSGT*PGEPGN
Trigger: GTTGCCAGGCTCTCCAGGGCAGGTCCCAGAGGTTTC...ACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR GCA 90 bp ACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACGAAACCTCTGGGACCTaGCCTGGAGAGCCTGGCAAC +
Preference number: 2 (lower is better)
Translates to: TWGQGLAAPRCTDEVGGDETSGT*PGEPGN
Trigger: GTTGCCAGGCTCTCCAGGGCAGGTCCCAGAGGTTTC...GTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp TGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGTCTGCCGGGAGGGAGGCCAGGTCTTaGACGGGCCCCCGTGGTTCT +
Preference number: 2 (lower is better)
Translates to: CEGDVCCSPPDPQSQSAGREARS*TGPRGS
Trigger: AGAACCACGGGGGCCCGTCCAAGACCTGGCCTCCCT...CCCGGCAGACTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp CCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGACACCAGGGACGAGGGAGGCCAGGTCTTaGACGGGCCCCCGTGGTTCT +
Preference number: 2 (lower is better)
Translates to: PRCTDEVGGDQAEVTPGTREARS*TGPRGS
Trigger: AGAACCACGGGGGCCCGTCCAAGACCTGGCCTCCCT...CGTCCCTGGTGTCACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp GCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGCAACTGGCCCGAGGCTaGGGACCCCACATGGTGATT +
Preference number: 2 (lower is better)
Translates to: ARGWLHRAAQMRSAVTRQQLARG*GPHMVI
Trigger: AATCACCATGTGGGGTCCCCAGCCTCGGGCCAGTTG...CTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp ACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCACGTGCAGACGGCGTaGGACAGGGGCTTGTTTCCT +
Preference number: 2 (lower is better)
Translates to: TWGQGLAAPRCTDEVGGDHVQTA*DRGLFP
Trigger: AGGAAACAAGCCCCTGTCCCACGCCGTCTGCACGTG...GTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp GTCTCTGACTGCCGTTCCCTTGGGTCCAGGCCTCTGGCGGGAGGGCGGGACCCCACTTCCCCCAGGCTGTaGGGAGGAGGCAGCCTATTC +
Preference number: 2 (lower is better)
Translates to: VSDCRSLGSRPLAGGRDPTSPRL*GGGSLF
Trigger: GAATAGGCTGCCTCCTCCCCACAGCCTGGGGGAAGT...GGGGTCCCGCCCTCCCGCCAGAGGCCTGGACCCAAGGGAACGGCAGTCAGAGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp GTCTCTGACTGCCGTTCCCTTGGGTCCAGGCCTCTGGCGGGAGGGCGGGACCCCCCTGGAAAACAGGGCTaGGACGCTGCTCTGTGGCCT +
Preference number: 2 (lower is better)
Translates to: VSDCRSLGSRPLAGGRDPPGKQG*DAALWP
Trigger: AGGCCACAGAGCAGCGTCCCAGCCCTGTTTTCCAGG...GGGGTCCCGCCCTCCCGCCAGAGGCCTGGACCCAAGGGAACGGCAGTCAGAGAC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR CAA 90 bp TGTGTGTGGGACTTTGCTGGCAGCAGCAGGCGCGGTGCCACGGCTTaGGGGACCAGCTGGTCACCAGGAGTCCTGCCATCCCCTGGTGCC +
Preference number: 2 (lower is better)
Translates to: CVWDFAGSSRRGATA*GTSWSPGVLPSPGA
Trigger: GGCACCAGGGGATGGCAGGACTCCTGGTGACCAGCTGGTCCCCAAAGCCGTGGCACCGCGCCTGCTGCTGCCAGCAAAGTCCCACACACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR-3UTR TCA 90 bp CCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGACACCAGGGACGCCGTGGTTCTCGGTGTaGAGGGGACGTCTGCTGCTC +
Preference number: 2 (lower is better)
Translates to: PRCTDEVGGDQAEVTPGTPWFSV*RGRLLL
Trigger: GAGCAGCAGACGTCCCCTTCACACCGAGAACCACGG...CGTCCCTGGTGTCACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR TCA 90 bp GGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCGTGACCAGGCAGAGGTaGCACCAGGGACGGTCTCCT +
Preference number: 2 (lower is better)
Translates to: GLGRAPVVLGVKGTSAAPVTRQR*HQGRSP
Trigger: AGGAGACCGTCCCTGGTGTCACCTCTGCCTGGTCAC...GGGAGCAGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR TCA 90 bp AGGGCCGTGGACTGGGGCACCCACCAGTCCTGGAAAACAGGGCTGGGACGCTGCGGGCTGGTGTGGAGATaGCCTGGAAAGTCCCTGCGC +
Preference number: 2 (lower is better)
Translates to: RAVDWGTHQSWKTGLGRCGLVWR*PGKSLR
Trigger: GCGCAGGGACTTTCCAGGTCATCTCCACACCAGCCC...GCAGCGTCCCAGCCCTGTTTTCCAGGACTGGTGGGTGCCCCAGTCCACGGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR GCA 90 bp TGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGTCTGCCGGGTGTGAAGGGGACGTCTaGTGCTCCCCACCAGACCCG +
Preference number: 2 (lower is better)
Translates to: CEGDVCCSPPDPQSQSAGCEGDV*CSPPDP
Trigger: CGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACA...CCCGGCAGACTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR GCA 90 bp ACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACACGGTCTCCTTGAGCTaGAACAACTGGCCCGAGGCT +
Preference number: 2 (lower is better)
Translates to: TWGQGLAAPRCTDEVGGDTVSLS*NNWPEA
Trigger: AGCCTCGGGCCAGTTGTTGCAGCTCAAGGAGACCGT...GTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR GCA 90 bp CTGGAAAACAGGGCTGGGACGCTGCTCTGTGGCCTCAGACAAGCTTGGTGGGCGCTGTGGGGCGGGAGGTaGCTCAGCACGTGGGGCCAG +
Preference number: 2 (lower is better)
Translates to: LENRAGTLLCGLRQAWWALWGGR*LSTWGQ
Trigger: CTGGCCCCACGTGCTGAGGCACCTCCCGCCCCACAG...CGCCCACCAAGCTTGTCTGAGGCCACAGAGCAGCGTCCCAGCCCTGTTTTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp GGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGCAACTGGCCCGAGGCTaGGGACCCCACATGGTGATT +
Preference number: 2 (lower is better)
Translates to: GLAAPRCTDEVGGDQAEVQLARG*GPHMVI
Trigger: AATCACCATGTGGGGTCCCCAGCCTCGGGCCAGTTG...CACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp CCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGACACCAGGGACGTTGAGCTGCAACAACTaGCCCGAGGCTGGGGACCCC +
Preference number: 2 (lower is better)
Translates to: PRCTDEVGGDQAEVTPGTLSCNN*PEAGDP
Trigger: GGGGTCCCCAGCCTCGGGCCAGTTGTTGCAGCTCAA...CGTCCCTGGTGTCACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp GGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGTGGGCCGGGAGACACTaGCTCTGGGTGAGGCACAGG +
Preference number: 2 (lower is better)
Translates to: GSRCEGDVCCSPPDPQSQWAGRH*LWVRHR
Trigger: CCTGTGCCTCACCCAGAGCCAGTGTCTCCCGGCCCA...CTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACACCGAGAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp AGCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGGACAGGGCTGGTTCTaGGAGGCTTGTGAACCCTCA +
Preference number: 2 (lower is better)
Translates to: STWGQGLAAPRCTDEVGGGQGWF*EACEPS
Trigger: TGAGGGTTCACAAGCCTCCCAGAACCAGCCCTGTCC...ACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp GACTGCCGTTCCCTTGGGTCCAGGCCTCTGGCGGGAGGGCGGGACCCCTTCCTCGGACAGGGCTGGTTCTaGGAGGCTTGTGAACCCTCA +
Preference number: 2 (lower is better)
Translates to: DCRSLGSRPLAGGRDPFLGQGWF*EACEPS
Trigger: TGAGGGTTCACAAGCCTCCCAGAACCAGCCCTGTCC...GAGGAAGGGGTCCCGCCCTCCCGCCAGAGGCCTGGACCCAAGGGAACGGCAGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp GAGGCAGAGCAGGCTCAGGTCTTGTGTGTTGGGCCTGGACACCTGGCAGGAAGGTTGGGTCCAGGCCTCTaGCGGGAGGGCGGGACCCCT +
Preference number: 2 (lower is better)
Translates to: EAEQAQVLCVGPGHLAGRLGPGL*REGGTP
Trigger: AGGGGTCCCGCCCTCCCGCCAGAGGCCTGGACCCAA...CCTTCCTGCCAGGTGTCCAGGCCCAACACACAAGACCTGAGCCTGCTCTGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR CAA 90 bp GCAGAAAGAATGGGGCGGCACCTGCCACAGGCTGTGTGTGGGACTTaGCTGGCAGCAGCAGGCGCGGTGCCACGGCTTTGGGGACCAGCT +
Preference number: 2 (lower is better)
Translates to: AERMGRHLPQAVCGT*LAAAGAVPRLWGPA
Trigger: AGCTGGTCCCCAAAGCCGTGGCACCGCGCCTGCTGCTGCCAGCAAAGTCCCACACACAGCCTGTGGCAGGTGCCGCCCCATTCTTTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR CAA 90 bp CACCAGGACCTCCTCTCAGGCTCCCAGCAAAGGAGGCCGGCAGCTTaGACACGAGGGTCCGGGAGCCGTGGCTCCTCCAGGTTAGTGGTG +
Preference number: 2 (lower is better)
Translates to: HQDLLSGSQQRRPAA*TRGSGSRGSSRLVV
Trigger: CACCACTAACCTGGAGGAGCCACGGCTCCCGGACCCTCGTGTCAAAGCTGCCGGCCTCCTTTGCTGGGAGCCTGAGAGGAGGTCCTGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR-3UTR TCA 90 bp GGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGGTGACCAGGCAGAGGTaGCACCAGGGACGGTCTCCT +
Preference number: 2 (lower is better)
Translates to: GSRCEGDVCCSPPDPQSQVTRQR*HQGRSP
Trigger: AGGAGACCGTCCCTGGTGTCACCTCTGCCTGGTCAC...CTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACACCGAGAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR TCA 90 bp AGGGCCGTGGACTGGGGCACCCACCAGTCCTGGAAAACAGGGCTGGGACGCTGCGTTCTGGGAGGCTTGTaGACCCTCAGCTCCTCCCAG +
Preference number: 2 (lower is better)
Translates to: RAVDWGTHQSWKTGLGRCVLGGL*TLSSSQ
Trigger: CTGGGAGGAGCTGAGGGTTCACAAGCCTCCCAGAAC...GCAGCGTCCCAGCCCTGTTTTCCAGGACTGGTGGGTGCCCCAGTCCACGGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR GCA 90 bp GGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGTGTGAAGGGGACGTCTaGTGCTCCCCACCAGACCCG +
Preference number: 2 (lower is better)
Translates to: GSRCEGDVCCSPPDPQSQCEGDV*CSPPDP
Trigger: CGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACA...CTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACACCGAGAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR GCA 90 bp AGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGACGGTCTCCTTGAGCTaGAACAACTGGCCCGAGGCT +
Preference number: 2 (lower is better)
Translates to: RGWLHRAAQMRSAVTRQRTVSLS*NNWPEA
Trigger: AGCCTCGGGCCAGTTGTTGCAGCTCAAGGAGACCGT...CCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR GCA 90 bp ATGGGGCTGGCCTCCTGCCCGGCACACTCGTTTCTGGCCACTCTTTCAGACGTGGGAGAGCCTGGCAACTaGAGGGCACTGTGGGGCGGG +
Preference number: 2 (lower is better)
Translates to: MGLASCPAHSFLATLSDVGEPGN*RALWGG
Trigger: CCCGCCCCACAGTGCCCTGCAGTTGCCAGGCTCTCC...CACGTCTGAAAGAGTGGCCAGAAACGAGTGTGCCGGGCAGGAGGCCAGCCCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR GCA 90 bp CCAGGTGGGAGGGCAGTGTGTGGTGTGTGTGTGGCCAGTCCCCAGGGACAGGACGAATGGGGCGGCACCTaGCACAGGCTGTGTGTGGGA +
Preference number: 2 (lower is better)
Translates to: PGGRAVCGVCVASPQGQDEWGGT*HRLCVG
Trigger: TCCCACACACAGCCTGTGGCAGGTGCCGCCCCATTC...GTCCTGTCCCTGGGGACTGGCCACACACACACCACACACTGCCCTCCCACCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR-3UTR CCA 90 bp GGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGTTGAGCTGCAACAACTaGCCCGAGGCTGGGGACCCC +
Preference number: 2 (lower is better)
Translates to: GSRCEGDVCCSPPDPQSQLSCNN*PEAGDP
Trigger: GGGGTCCCCAGCCTCGGGCCAGTTGTTGCAGCTCAA...CTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACACCGAGAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp ACATGCTCAAGTGAGCAGGGGCCCCAGGCCACGTCCAACTGTCCGCGAGGCATGAACTGCAGGGCACTGTaGGGCGGGAGGTGCCTCAGC +
Preference number: 2 (lower is better)
Translates to: TCSSEQGPQATSNCPRGMNCRAL*GGRCLS
Trigger: GCTGAGGCACCTCCCGCCCCACAGTGCCCTGCAGTT...CATGCCTCGCGGACAGTTGGACGTGGCCTGGGGCCCCTGCTCACTTGAGCATGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp AGGCCAGGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTCTGCCCTGGAGAGCCTaGCAACTGCAGGGCACTGTG +
Preference number: 2 (lower is better)
Translates to: RPGLGRAPVVLGVKGTSALPWRA*QLQGTV
Trigger: CACAGTGCCCTGCAGTTGCCAGGCTCTCCAGGGCAG...AGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACCTGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp AGGGCCGTGGACTGGGGCACCCACCAGTCCTGGAAAACAGGGCTGGGACGCTGCTGTGGGCTCCGGAGCTaGGTCTGGGGAAAAGCTGGT +
Preference number: 2 (lower is better)
Translates to: RAVDWGTHQSWKTGLGRCCGLRS*VWGKAG
Trigger: ACCAGCTTTTCCCCAGACCCAGCTCCGGAGCCCACA...GCAGCGTCCCAGCCCTGTTTTCCAGGACTGGTGGGTGCCCCAGTCCACGGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp AACGTCTGGACTGTAGTCTCTGACTGCCGTTCCCTTGGGTCCAGGCCTCTGGCGGGTGGGGCAGGGCCGTaGACTGGGGCACCCACCAGT +
Preference number: 2 (lower is better)
Translates to: NVWTVVSDCRSLGSRPLAGGAGP*TGAPTS
Trigger: ACTGGTGGGTGCCCCAGTCCACGGCCCTGCCCCACC...CGCCAGAGGCCTGGACCCAAGGGAACGGCAGTCAGAGACTACAGTCCAGACGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR TCA 90 bp ACATGCTCAAGTGAGCAGGGGCCCCAGGCCACGTCCAACTGTCCGCGAGGCATGCAGGGACGGTCTCCTTaGGCTGCAACAACTGGCCCG +
Preference number: 2 (lower is better)
Translates to: TCSSEQGPQATSNCPRGMQGRSP*AATTGP
Trigger: CGGGCCAGTTGTTGCAGCTCAAGGAGACCGTCCCTG...CATGCCTCGCGGACAGTTGGACGTGGCCTGGGGCCCCTGCTCACTTGAGCATGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR TCA 90 bp AGCTCCGAGGGCACCGCGTACGGGGCCAGGACATTTCTGGCCCACTCTTTGAGCGTGACCAGGCAGAGGTaGCACCAGGGACGGTCTCCT +
Preference number: 2 (lower is better)
Translates to: SSEGTAYGARTFLAHSLSVTRQR*HQGRSP
Trigger: AGGAGACCGTCCCTGGTGTCACCTCTGCCTGGTCAC...GCTCAAAGAGTGGGCCAGAAATGTCCTGGCCCCGTACGCGGTGCCCTCGGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542688.5
3UTR-3UTR TCA 90 bp ACGAATGGAGGAGGCAGGAGCTGGGTCCATGGTCTCCCTGCCAGGGAAGCCGCAAGAGGGTTCACCGGCTaGGGGGCTGGTGTGGAGATG +
Preference number: 2 (lower is better)
Translates to: TNGGGRSWVHGLPAREAARGFTG*GAGVEM
Trigger: CATCTCCACACCAGCCCCTCAGCCGGTGAACCCTCT...TGCGGCTTCCCTGGCAGGGAGACCATGGACCCAGCTCCTGCCTCCTCCATTCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR-3UTR TCA 90 bp GGAGAGGGCTGCACAGCCACGGGGCGTCTCACTCCTCCACACGCCACTCACGTTAGGGTTGGAACTGGCTaGGCTGGGAGGTCCTCGAGT +
Preference number: 2 (lower is better)
Translates to: GEGCTATGRLTPPHATHVRVGTG*AGRSSS
Trigger: ACTCGAGGACCTCCCAGCTCAGCCAGTTCCAACCCT...AACGTGAGTGGCGTGTGGAGGAGTGAGACGCCCCGTGGCTGTGCAGCCCTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543676.1
3UTR-3UTR GCA 90 bp GGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCACGGTCTCCTTGAGCTaGAACAACTGGCCCGAGGCT +
Preference number: 2 (lower is better)
Translates to: GLGRAPVVLGVKGTSAAPTVSLS*NNWPEA
Trigger: AGCCTCGGGCCAGTTGTTGCAGCTCAAGGAGACCGT...GGGAGCAGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR GCA 90 bp ATGGGGCTGGCCTCCTGCCCGGCACACTCGTTTCTGGCCACTCTTTCAGACGTGCTGGCTGCACCGCGCTaGACAGATGAGGTCGGCGGT +
Preference number: 2 (lower is better)
Translates to: MGLASCPAHSFLATLSDVLAAPR*TDEVGG
Trigger: ACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAG...CACGTCTGAAAGAGTGGCCAGAAACGAGTGTGCCGGGCAGGAGGCCAGCCCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR GCA 90 bp ACATGCTCAAGTGAGCAGGGGCCCCAGGCCACGTCCAACTGTCCGCGAGGCATGATGGGGCTGGCCTCCTaGCCGGCACACTCGTTTCTG +
Preference number: 2 (lower is better)
Translates to: TCSSEQGPQATSNCPRGMMGLAS*PAHSFL
Trigger: CAGAAACGAGTGTGCCGGGCAGGAGGCCAGCCCCAT...CATGCCTCGCGGACAGTTGGACGTGGCCTGGGGCCCCTGCTCACTTGAGCATGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR GCA 90 bp CTGACTGACACCTGGAGAGGGCTGCACAGCCACGGGGCGTCTCACTCCTCCACAGCTGAGCCCCGTCCCTaGAGACAGGGTTGGAACTGG +
Preference number: 2 (lower is better)
Translates to: LTDTWRGLHSHGASHSSTAEPRP*RQGWNW
Trigger: CCAGTTCCAACCCTGTCTGCAGGGACGGGGCTCAGC...TGTGGAGGAGTGAGACGCCCCGTGGCTGTGCAGCCCTCTCCAGGTGTCAGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543676.1
3UTR-3UTR CCA 90 bp AGGCCAGGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTCAACTGGCCCGAGGCTaGGGACCCCACATGGTGATT +
Preference number: 2 (lower is better)
Translates to: RPGLGRAPVVLGVKGTSAQLARG*GPHMVI
Trigger: AATCACCATGTGGGGTCCCCAGCCTCGGGCCAGTTG...AGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACCTGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp GACCAGCTGGTCACCAGGAGTCCTGCCATCCCCTGGTGCCTGAGAGAAGCTGGGCTGCCCTGGAGAGCCTaGCAACTGCAGGGCACTGTG +
Preference number: 2 (lower is better)
Translates to: DQLVTRSPAIPWCLREAGLPWRA*QLQGTV
Trigger: CACAGTGCCCTGCAGTTGCCAGGCTCTCCAGGGCAG...CCCAGCTTCTCTCAGGCACCAGGGGATGGCAGGACTCCTGGTGACCAGCTGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR-3UTR CCA 90 bp GGCCAGACACTGCTGGGCGATGACTGTTACTTCCCCCAGGCTGTGGGGAGGAGGCTCTGGGACCTGCCCTaGAGAGCCTGGCAACTGCAG +
Preference number: 2 (lower is better)
Translates to: GQTLLGDDCYFPQAVGRRLWDLP*RAWQLQ
Trigger: CTGCAGTTGCCAGGCTCTCCAGGGCAGGTCCCAGAG...CCTCCTCCCCACAGCCTGGGGGAAGTAACAGTCATCGCCCAGCAGTGTCTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp CCAGGTGGGAGGGCAGTGTGTGGTGTGTGTGTGGCCAGTCCCCAGGGACAGGACCACGTGCAGACGGCGTaGGACAGGGGCTTGTTTCCT +
Preference number: 2 (lower is better)
Translates to: PGGRAVCGVCVASPQGQDHVQTA*DRGLFP
Trigger: AGGAAACAAGCCCCTGTCCCACGCCGTCTGCACGTG...GTCCTGTCCCTGGGGACTGGCCACACACACACCACACACTGCCCTCCCACCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR-3UTR CCA 90 bp CTGGAAAACAGGGCTGGGACGCTGCTCTGTGGCCTCAGACAAGCTTGGTGGGCGTGGGCCGGGAGACACTaGCTCTGGGTGAGGCACAGG +
Preference number: 2 (lower is better)
Translates to: LENRAGTLLCGLRQAWWAWAGRH*LWVRHR
Trigger: CCTGTGCCTCACCCAGAGCCAGTGTCTCCCGGCCCA...CGCCCACCAAGCTTGTCTGAGGCCACAGAGCAGCGTCCCAGCCCTGTTTTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp AACGTCTGGACTGTAGTCTCTGACTGCCGTTCCCTTGGGTCCAGGCCTCTGGCGGGAGGGCCCCCTGGGTaGCTGCCCAGACCTCCTATG +
Preference number: 2 (lower is better)
Translates to: NVWTVVSDCRSLGSRPLAGGPPG*LPRPPM
Trigger: CATAGGAGGTCTGGGCAGCCACCCAGGGGGCCCTCC...CGCCAGAGGCCTGGACCCAAGGGAACGGCAGTCAGAGACTACAGTCCAGACGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp CCAGGTGGGAGGGCAGTGTGTGGTGTGTGTGTGGCCAGTCCCCAGGGACAGGACGCCACAGGCTGTGTGTaGGACTTTGCTGGCAGCAGC +
Preference number: 2 (lower is better)
Translates to: PGGRAVCGVCVASPQGQDATGCV*DFAGSS
Trigger: GCTGCTGCCAGCAAAGTCCCACACACAGCCTGTGGC...GTCCTGTCCCTGGGGACTGGCCACACACACACCACACACTGCCCTCCCACCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR CAA 90 bp AGAGTGACGGGCTTCCTGCTCAGAGAGAGGCAGATGAGCCCCACGTaGCTACCGCGGTCGTCCATCCCGTGCTCTTGTCTGTGCCGGCAG +
Preference number: 2 (lower is better)
Translates to: RVTGFLLRERQMSPT*LPRSSIPCSCLCRQ
Trigger: CTGCCGGCACAGACAAGAGCACGGGATGGACGACCGCGGTAGCAACGTGGGGCTCATCTGCCTCTCTCTGAGCAGGAAGCCCGTCACTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR-3UTR TCA 90 bp AGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGGGGGACCCCACATGGTaGTTTCATCCCAAACAGTTC +
Preference number: 2 (lower is better)
Translates to: RGWLHRAAQMRSAVTRQRGDPTW*FHPKQF
Trigger: GAACTGTTTGGGATGAAATCACCATGTGGGGTCCCC...CCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR TCA 90 bp AGCTCCGAGGGCACCGCGTACGGGGCCAGGACATTTCTGGCCCACTCTTTGAGCTCACAGCCACATCTGTaGTGCTGGGGTGGGCCAGCA +
Preference number: 2 (lower is better)
Translates to: SSEGTAYGARTFLAHSLSSQPHL*CWGGPA
Trigger: TGCTGGCCCACCCCAGCATCACAGATGTGGCTGTGA...GCTCAAAGAGTGGGCCAGAAATGTCCTGGCCCCGTACGCGGTGCCCTCGGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542688.5
3UTR-3UTR TCA 90 bp CACCAGCTCCGAGGGCACCGCGTACGGGGCCAGGACATTTCTGGCCCACTCTTTCTCCCTGTGGGACAGTaGGTGTCCTTCTCGGAGGGT +
Preference number: 2 (lower is better)
Translates to: HQLRGHRVRGQDISGPLFLPVGQ*VSFSEG
Trigger: ACCCTCCGAGAAGGACACTCACTGTCCCACAGGGAG...AAAGAGTGGGCCAGAAATGTCCTGGCCCCGTACGCGGTGCCCTCGGAGCTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542688.5
3UTR-3UTR GCA 90 bp TGGACACACAGTAGTGTGCAGGGTGGCAGGTGTCCCCACAGTGGGAGCTGCTCTCTGGCTGCACCGCGCTaGACAGATGAGGTCGGCGGT +
Preference number: 2 (lower is better)
Translates to: WTHSSVQGGRCPHSGSCSLAAPR*TDEVGG
Trigger: ACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAG...AGAGCAGCTCCCACTGTGGGGACACCTGCCACCCTGCACACTACTGTGTGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR GCA 90 bp AGGGCCGTGGACTGGGGCACCCACCAGTCCTGGAAAACAGGGCTGGGACGCTGCGCCCCGCTAAGTAAATaGAACGTGGGTGCACCCAAC +
Preference number: 2 (lower is better)
Translates to: RAVDWGTHQSWKTGLGRCAPLSK*NVGAPN
Trigger: GTTGGGTGCACCCACGTTGCATTTACTTAGCGGGGC...GCAGCGTCCCAGCCCTGTTTTCCAGGACTGGTGGGTGCCCCAGTCCACGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR GCA 90 bp GCACCTGCAGCCGACTGTAGCTTTGCTCTTGGACGGGGAACATCCACTGGCTGGTGCCACACCGCCCACTaGCTCACTCCGTGCTGTGCC +
Preference number: 2 (lower is better)
Translates to: APAADCSFALGRGTSTGWCHTAH*LTPCCA
Trigger: GGCACAGCACGGAGTGAGGCAGTGGGCGGTGTGGCA...CCAGCCAGTGGATGTTCCCCGTCCAAGAGCAAAGCTACAGTCGGCTGCAGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR-3UTR CCA 90 bp GCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGACACCATTTGTGGGAAACCTCTaGGACCTGCCCTGGAGAGCC +
Preference number: 2 (lower is better)
Translates to: AAPRCTDEVGGDQAEVTPFVGNL*DLPWRA
Trigger: GGCTCTCCAGGGCAGGTCCCAGAGGTTTCCCACAAA...TGGTGTCACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp CTGGAAAACAGGGCTGGGACGCTGCTCTGTGGCCTCAGACAAGCTTGGTGGGCGCCCAGACCTCCTATGTaGGCCGGGAGACACTGGCTC +
Preference number: 2 (lower is better)
Translates to: LENRAGTLLCGLRQAWWAPRPPM*AGRHWL
Trigger: GAGCCAGTGTCTCCCGGCCCACATAGGAGGTCTGGG...CGCCCACCAAGCTTGTCTGAGGCCACAGAGCAGCGTCCCAGCCCTGTTTTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp AGGGCCGTGGACTGGGGCACCCACCAGTCCTGGAAAACAGGGCTGGGACGCTGCCGGCACACTCGTTTCTaGCCACTCTTTCAGACGTGC +
Preference number: 2 (lower is better)
Translates to: RAVDWGTHQSWKTGLGRCRHTRF*PLFQTC
Trigger: GCACGTCTGAAAGAGTGGCCAGAAACGAGTGTGCCG...GCAGCGTCCCAGCCCTGTTTTCCAGGACTGGTGGGTGCCCCAGTCCACGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp GAGGCAGAGCAGGCTCAGGTCTTGTGTGTTGGGCCTGGACACCTGGCAGGAAGGGGCACCCACCAGTCCTaGAAAACAGGGCTGGGACGC +
Preference number: 2 (lower is better)
Translates to: EAEQAQVLCVGPGHLAGRGTHQS*KTGLGR
Trigger: GCGTCCCAGCCCTGTTTTCCAGGACTGGTGGGTGCC...CCTTCCTGCCAGGTGTCCAGGCCCAACACACAAGACCTGAGCCTGCTCTGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR-3UTR CCA 90 bp ACGAATGGAGGAGGCAGGAGCTGGGTCCATGGTCTCCCTGCCAGGGAAGCCGCAAGTCCTGCCATCCCCTaGTGCCTGAGAGAAGCTGGG +
Preference number: 2 (lower is better)
Translates to: TNGGGRSWVHGLPAREAASPAIP*CLREAG
Trigger: CCCAGCTTCTCTCAGGCACCAGGGGATGGCAGGACT...TGCGGCTTCCCTGGCAGGGAGACCATGGACCCAGCTCCTGCCTCCTCCATTCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR-3UTR TCA 90 bp GAGTGTCCTTCTCGGAGGGTCACCACAGCAGTGACCCGCTGGCCCCATGTCATACCGTGGTTCTCGGTGTaGAGGGGACGTCTGCTGCTC +
Preference number: 2 (lower is better)
Translates to: ECPSRRVTTAVTRWPHVIPWFSV*RGRLLL
Trigger: GAGCAGCAGACGTCCCCTTCACACCGAGAACCACGG...TATGACATGGGGCCAGCGGGTCACTGCTGTGGTGACCCTCCGAGAAGGACACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542688.5
3UTR-3UTR TCA 90 bp GGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCGGGGACCCCACATGGTaGTTTCATCCCAAACAGTTC +
Preference number: 2 (lower is better)
Translates to: GLGRAPVVLGVKGTSAAPGDPTW*FHPKQF
Trigger: GAACTGTTTGGGATGAAATCACCATGTGGGGTCCCC...GGGAGCAGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR TCA 90 bp CCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGACACCAGGGACGGGGGACCCCACATGGTaGTTTCATCCCAAACAGTTC +
Preference number: 2 (lower is better)
Translates to: PRCTDEVGGDQAEVTPGTGDPTW*FHPKQF
Trigger: GAACTGTTTGGGATGAAATCACCATGTGGGGTCCCC...CGTCCCTGGTGTCACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR TCA 90 bp TGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGTCTGCCGGGGGGGACCCCACATGGTaGTTTCATCCCAAACAGTTC +
Preference number: 2 (lower is better)
Translates to: CEGDVCCSPPDPQSQSAGGDPTW*FHPKQF
Trigger: GAACTGTTTGGGATGAAATCACCATGTGGGGTCCCC...CCCGGCAGACTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACA
62% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR TCA 90 bp AGCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTTTCTGTGACACATGCTaGTGGACACACAGTAGTGTG +
Preference number: 2 (lower is better)
Translates to: STWGQGLAAPRCTDEVGGFCDTC*WTHSSV
Trigger: CACACTACTGTGTGTCCATCAGCATGTGTCACAGAA...ACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR TCA 90 bp CAGCTGACTGACACCTGGAGAGGGCTGCACAGCCACGGGGCGTCTCACTCCTCCGTGTATTCAGGAACCTaGGATGTGGGGTGTGGCCAG +
Preference number: 2 (lower is better)
Translates to: QLTDTWRGLHSHGASHSSVYSGT*DVGCGQ
Trigger: CTGGCCACACCCCACATCTCAGGTTCCTGAATACAC...GGAGGAGTGAGACGCCCCGTGGCTGTGCAGCCCTCTCCAGGTGTCAGTCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543676.1
3UTR-3UTR TCA 90 bp GAGGCAGAGCAGGCTCAGGTCTTGTGTGTTGGGCCTGGACACCTGGCAGGAAGGGGAGCTCAGTCACGGTaGGTTCGCAAACAGCACCCC +
Preference number: 2 (lower is better)
Translates to: EAEQAQVLCVGPGHLAGRGAQSR*VRKQHP
Trigger: GGGGTGCTGTTTGCGAACTCACCGTGACTGAGCTCC...CCTTCCTGCCAGGTGTCCAGGCCCAACACACAAGACCTGAGCCTGCTCTGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR-3UTR GCA 90 bp CTGGAAAACAGGGCTGGGACGCTGCTCTGTGGCCTCAGACAAGCTTGGTGGGCGGAAACCTCTGGGACCTaGCCTGGAGAGCCTGGCAAC +
Preference number: 2 (lower is better)
Translates to: LENRAGTLLCGLRQAWWAETSGT*PGEPGN
Trigger: GTTGCCAGGCTCTCCAGGGCAGGTCCCAGAGGTTTC...CGCCCACCAAGCTTGTCTGAGGCCACAGAGCAGCGTCCCAGCCCTGTTTTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR GCA 90 bp CATTCCGGGGGCAGAATGTTCTGGGTAAGTTCAGGCCAGACACTGCTGGGCGATGGCCCCCTGGGTGGCTaGCCAGACCTCCTATGTGGG +
Preference number: 2 (lower is better)
Translates to: HSGGRMFWVSSGQTLLGDGPLGG*PDLLCG
Trigger: CCCACATAGGAGGTCTGGGCAGCCACCCAGGGGGCC...ATCGCCCAGCAGTGTCTGGCCTGAACTTACCCAGAACATTCTGCCCCCGGAATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR GCA 90 bp CTGGAAAACAGGGCTGGGACGCTGCTCTGTGGCCTCAGACAAGCTTGGTGGGCGCCCCACAGTGGGAGCTaGTCTCCTCCAAGAGCAGCA +
Preference number: 2 (lower is better)
Translates to: LENRAGTLLCGLRQAWWAPHSGS*SPPRAA
Trigger: TGCTGCTCTTGGAGGAGAGCAGCTCCCACTGTGGGG...CGCCCACCAAGCTTGTCTGAGGCCACAGAGCAGCGTCCCAGCCCTGTTTTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR GCA 90 bp GTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGTCTGCCGGGTCCTTCTTGTCAATCTTaGCCATCTGGTTCCGCGGGA +
Preference number: 2 (lower is better)
Translates to: VKGTSAAPHQTRSPSLPGPSCQS*PSGSAG
Trigger: TCCCGCGGAACCAGATGGGCAAGATTGACAAGAAGG...ACCCGGCAGACTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542688.5
3UTR-3UTR CCA 90 bp ATGGGGCTGGCCTCCTGCCCGGCACACTCGTTTCTGGCCACTCTTTCAGACGTGCAACTGGCCCGAGGCTaGGGACCCCACATGGTGATT +
Preference number: 2 (lower is better)
Translates to: MGLASCPAHSFLATLSDVQLARG*GPHMVI
Trigger: AATCACCATGTGGGGTCCCCAGCCTCGGGCCAGTTG...CACGTCTGAAAGAGTGGCCAGAAACGAGTGTGCCGGGCAGGAGGCCAGCCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp CCCAGTCTGCCGGGTCATGAGGGGTGGAAGTGCCTGATGAGCGCCTTCTTGTCATTGAGCTGCAACAACTaGCCCGAGGCTGGGGACCCC +
Preference number: 2 (lower is better)
Translates to: PSLPGHEGWKCLMSAFLSLSCNN*PEAGDP
Trigger: GGGGTCCCCAGCCTCGGGCCAGTTGTTGCAGCTCAA...TGACAAGAAGGCGCTCATCAGGCACTTCCACCCCTCATGACCCGGCAGACTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542688.5
3UTR-3UTR CCA 90 bp TTTAATGGGGAGGGAGGAGAGGATGAGTTCCCTCCAGGACGGGCTTGTTCTCGGGGAGGGCCCCCTGGGTaGCTGCCCAGACCTCCTATG +
Preference number: 2 (lower is better)
Translates to: FNGEGGEDEFPPGRACSRGGPPG*LPRPPM
Trigger: CATAGGAGGTCTGGGCAGCCACCCAGGGGGCCCTCC...CCGAGAACAAGCCCGTCCTGGAGGGAACTCATCCTCTCCTCCCTCCCCATTAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp ACATGCTCAAGTGAGCAGGGGCCCCAGGCCACGTCCAACTGTCCGCGAGGCATGCCCATGGGACAGGGCTaGTTCTGGGAGGCTTGTGAA +
Preference number: 2 (lower is better)
Translates to: TCSSEQGPQATSNCPRGMPMGQG*FWEACE
Trigger: TTCACAAGCCTCCCAGAACCAGCCCTGTCCCATGGG...CATGCCTCGCGGACAGTTGGACGTGGCCTGGGGCCCCTGCTCACTTGAGCATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp CATTTCTGCCATTTCCGGCAGAGCAGGTGCTCAGAGGCAGGAGTGTCAGCTGACGGGAGGTCCTCGAGTTaGGGGCAGGGGCACTGCAGG +
Preference number: 2 (lower is better)
Translates to: HFCHFRQSRCSEAGVSADGRSSS*GQGHCR
Trigger: CCTGCAGTGCCCCTGCCCCCAACTCGAGGACCTCCC...GTCAGCTGACACTCCTGCCTCTGAGCACCTGCTCTGCCGGAAATGGCAGAAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543676.1
3UTR-3UTR CCA 90 bp GAGGCAGAGCAGGCTCAGGTCTTGTGTGTTGGGCCTGGACACCTGGCAGGAAGGGCTTTGGGGACCAGCTaGTCACCAGGAGTCCTGCCA +
Preference number: 2 (lower is better)
Translates to: EAEQAQVLCVGPGHLAGRALGTS*SPGVLP
Trigger: TGGCAGGACTCCTGGTGACCAGCTGGTCCCCAAAGC...CCTTCCTGCCAGGTGTCCAGGCCCAACACACAAGACCTGAGCCTGCTCTGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR-3UTR TCA 90 bp AGGCCAGGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGGGGACCCCACATGGTaGTTTCATCCCAAACAGTTC +
Preference number: 2 (lower is better)
Translates to: RPGLGRAPVVLGVKGTSAGDPTW*FHPKQF
Trigger: GAACTGTTTGGGATGAAATCACCATGTGGGGTCCCC...AGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACCTGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR TCA 90 bp GGAAATGCACGGAACCCATGGGACAGGGCTGGTTCTGGGAGGCTTGTGAACCCTGTGACCAGGCAGAGGTaGCACCAGGGACGGTCTCCT +
Preference number: 2 (lower is better)
Translates to: GNARNPWDRAGSGRLVNPVTRQR*HQGRSP
Trigger: AGGAGACCGTCCCTGGTGTCACCTCTGCCTGGTCAC...AGGGTTCACAAGCCTCCCAGAACCAGCCCTGTCCCATGGGTTCCGTGCATTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR TCA 90 bp AACGTCTGGACTGTAGTCTCTGACTGCCGTTCCCTTGGGTCCAGGCCTCTGGCGGACACTGCTGGGCGATaGCTGTTACTTCCCCCAGGC +
Preference number: 2 (lower is better)
Translates to: NVWTVVSDCRSLGSRPLADTAGR*LLLPPG
Trigger: GCCTGGGGGAAGTAACAGTCATCGCCCAGCAGTGTC...CGCCAGAGGCCTGGACCCAAGGGAACGGCAGTCAGAGACTACAGTCCAGACGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR TCA 90 bp ATAAACTGGGCTTTAATGGGGAGGGAGGAGAGGATGAGTTCCCTCCAGGACGGGGGCGACATGCTCAAGTaGGCAGGGGCCCCAGGCCAC +
Preference number: 2 (lower is better)
Translates to: INWALMGREERMSSLQDGGDMLK*AGAPGH
Trigger: GTGGCCTGGGGCCCCTGCTCACTTGAGCATGTCGCC...CCCGTCCTGGAGGGAACTCATCCTCTCCTCCCTCCCCATTAAAGCCCAGTTTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR TCA 90 bp CTCACTCCTCCACACGCCACTCACGTTCTGCTCTCTGCTGGGGACATTTCTGACAACCCAGGCACAGGCTaGGCCCCGTCCCTGCAGACA +
Preference number: 2 (lower is better)
Translates to: LTPPHATHVLLSAGDISDNPGTG*APSLQT
Trigger: TGTCTGCAGGGACGGGGCTCAGCCTGTGCCTGGGTT...GTCAGAAATGTCCCCAGCAGAGAGCAGAACGTGAGTGGCGTGTGGAGGAGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543676.1
3UTR-3UTR GCA 90 bp TCCGGGGGCAGAATGTTCTGGGTAAGTTCAGGCCAGACACTGCTGGGCGATGACTGTGAAGGGGACGTCTaGTGCTCCCCACCAGACCCG +
Preference number: 2 (lower is better)
Translates to: SGGRMFWVSSGQTLLGDDCEGDV*CSPPDP
Trigger: CGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACA...GTCATCGCCCAGCAGTGTCTGGCCTGAACTTACCCAGAACATTCTGCCCCCGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR GCA 90 bp CAACACACCTTCCTGAGGTTTCTGCATCGGCCACGCCTGTGGGCTCCGGAGCTGACGGTCTCCTTGAGCTaGAACAACTGGCCCGAGGCT +
Preference number: 2 (lower is better)
Translates to: QHTFLRFLHRPRLWAPELTVSLS*NNWPEA
Trigger: AGCCTCGGGCCAGTTGTTGCAGCTCAAGGAGACCGT...CAGCTCCGGAGCCCACAGGCGTGGCCGATGCAGAAACCTCAGGAAGGTGTGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp TTTAATGGGGAGGGAGGAGAGGATGAGTTCCCTCCAGGACGGGCTTGTTCTCGGAGGGAGGCCAGGTCTTaGACGGGCCCCCGTGGTTCT +
Preference number: 2 (lower is better)
Translates to: FNGEGGEDEFPPGRACSRREARS*TGPRGS
Trigger: AGAACCACGGGGGCCCGTCCAAGACCTGGCCTCCCT...CCGAGAACAAGCCCGTCCTGGAGGGAACTCATCCTCTCCTCCCTCCCCATTAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp TGGACACACAGTAGTGTGCAGGGTGGCAGGTGTCCCCACAGTGGGAGCTGCTCTCAACTGGCCCGAGGCTaGGGACCCCACATGGTGATT +
Preference number: 2 (lower is better)
Translates to: WTHSSVQGGRCPHSGSCSQLARG*GPHMVI
Trigger: AATCACCATGTGGGGTCCCCAGCCTCGGGCCAGTTG...AGAGCAGCTCCCACTGTGGGGACACCTGCCACCCTGCACACTACTGTGTGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp TTTAATGGGGAGGGAGGAGAGGATGAGTTCCCTCCAGGACGGGCTTGTTCTCGGTGGGCCGGGAGACACTaGCTCTGGGTGAGGCACAGG +
Preference number: 2 (lower is better)
Translates to: FNGEGGEDEFPPGRACSRWAGRH*LWVRHR
Trigger: CCTGTGCCTCACCCAGAGCCAGTGTCTCCCGGCCCA...CCGAGAACAAGCCCGTCCTGGAGGGAACTCATCCTCTCCTCCCTCCCCATTAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp TCTCTTGTGGCTGCTGTGGTCCACACCTGTCTGCACACGCCTCCTGTTACTGATGGAGGGCCCCCTGGGTaGCTGCCCAGACCTCCTATG +
Preference number: 2 (lower is better)
Translates to: SLVAAVVHTCLHTPPVTDGGPPG*LPRPPM
Trigger: CATAGGAGGTCTGGGCAGCCACCCAGGGGGCCCTCC...ATCAGTAACAGGAGGCGTGTGCAGACAGGTGTGGACCACAGCAGCCACAAGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR-3UTR CCA 90 bp AACGTCTGGACTGTAGTCTCTGACTGCCGTTCCCTTGGGTCCAGGCCTCTGGCGGGTGTGGAGATGACCTaGAAAGTCCCTGCGCTGGGG +
Preference number: 2 (lower is better)
Translates to: NVWTVVSDCRSLGSRPLAGVEMT*KVPALG
Trigger: CCCCAGCGCAGGGACTTTCCAGGTCATCTCCACACC...CGCCAGAGGCCTGGACCCAAGGGAACGGCAGTCAGAGACTACAGTCCAGACGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp AACGTCTGGACTGTAGTCTCTGACTGCCGTTCCCTTGGGTCCAGGCCTCTGGCGGCCACAGACATGAAATaGGGGCCATGGGGCAGGTGG +
Preference number: 2 (lower is better)
Translates to: NVWTVVSDCRSLGSRPLAATDMK*GPWGRW
Trigger: CCACCTGCCCCATGGCCCCCATTTCATGTCTGTGGC...CGCCAGAGGCCTGGACCCAAGGGAACGGCAGTCAGAGACTACAGTCCAGACGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp CCAGGTGGGAGGGCAGTGTGTGGTGTGTGTGTGGCCAGTCCCCAGGGACAGGACGGGGGCAGAATGTTCTaGGTAAGTTCAGGCCAGACA +
Preference number: 2 (lower is better)
Translates to: PGGRAVCGVCVASPQGQDGGRMF*VSSGQT
Trigger: TGTCTGGCCTGAACTTACCCAGAACATTCTGCCCCC...GTCCTGTCCCTGGGGACTGGCCACACACACACCACACACTGCCCTCCCACCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR-3UTR CCA 90 bp CTGACTGTTCCCGGGGTCAGGCCATGGGGATGCACAAGGCCACACCGTGAGGCACGGCACACTCGTTTCTaGCCACTCTTTCAGACGTGC +
Preference number: 2 (lower is better)
Translates to: LTVPGVRPWGCTRPHREARHTRF*PLFQTC
Trigger: GCACGTCTGAAAGAGTGGCCAGAAACGAGTGTGCCG...TGCCTCACGGTGTGGCCTTGTGCATCCCCATGGCCTGACCCCGGGAACAGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp CTGACTGTTCCCGGGGTCAGGCCATGGGGATGCACAAGGCCACACCGTGAGGCAGGCCTCAGACAAGCTTaGTGGGCGACATGCTCAAGT +
Preference number: 2 (lower is better)
Translates to: LTVPGVRPWGCTRPHREAGLRQA*WATCSS
Trigger: ACTTGAGCATGTCGCCCACCAAGCTTGTCTGAGGCC...TGCCTCACGGTGTGGCCTTGTGCATCCCCATGGCCTGACCCCGGGAACAGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp AGGTTAGTGGTGCACACAGCGCTTGCCACACCGCCCACTGCCTCACTCCGTGCTTGGGACGCTGCTCTGTaGCCTCAGACAAGCTTGGTG +
Preference number: 2 (lower is better)
Translates to: RLVVHTALATPPTASLRAWDAAL*PQTSLV
Trigger: CACCAAGCTTGTCTGAGGCCACAGAGCAGCGTCCCA...AGCACGGAGTGAGGCAGTGGGCGGTGTGGCAAGCGCTGTGTGCACCACTAACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR-3UTR CCA 90 bp GCACCTGCAGCCGACTGTAGCTTTGCTCTTGGACGGGGAACATCCACTGGCTGGCTAACTTTTGTGGCATaGGGCCGCCCAGCAAGGGGC +
Preference number: 2 (lower is better)
Translates to: APAADCSFALGRGTSTGWLTFVA*GRPARG
Trigger: GCCCCTTGCTGGGCGGCCCCATGCCACAAAAGTTAG...CCAGCCAGTGGATGTTCCCCGTCCAAGAGCAAAGCTACAGTCGGCTGCAGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR CAA 90 bp GGTCATGAGGGGTGGAAGTGCCTGATGAGCGCCTTCTTGTCAATCTaGCCCATCTGGTTCCGCGGGATCTCCTCCACCAGCACCAGCTCC +
Preference number: 2 (lower is better)
Translates to: GHEGWKCLMSAFLSI*PIWFRGISSTSTSS
Trigger: GGAGCTGGTGCTGGTGGAGGAGATCCCGCGGAACCAGATGGGCAAGATTGACAAGAAGGCGCTCATCAGGCACTTCCACCCCTCATGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542688.5
3UTR CAA 90 bp AGTCTGCCGGGTCATGAGGGGTGGAAGTGCCTGATGAGCGCCTTCTaGTCAATCTTGCCCATCTGGTTCCGCGGGATCTCCTCCACCAGC +
Preference number: 2 (lower is better)
Translates to: SLPGHEGWKCLMSAF*SILPIWFRGISSTS
Trigger: GCTGGTGGAGGAGATCCCGCGGAACCAGATGGGCAAGATTGACAAGAAGGCGCTCATCAGGCACTTCCACCCCTCATGACCCGGCAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542688.5
3UTR-3UTR TCA 90 bp TTTAATGGGGAGGGAGGAGAGGATGAGTTCCCTCCAGGACGGGCTTGTTCTCGGCCGTGGTTCTCGGTGTaGAGGGGACGTCTGCTGCTC +
Preference number: 2 (lower is better)
Translates to: FNGEGGEDEFPPGRACSRPWFSV*RGRLLL
Trigger: GAGCAGCAGACGTCCCCTTCACACCGAGAACCACGG...CCGAGAACAAGCCCGTCCTGGAGGGAACTCATCCTCTCCTCCCTCCCCATTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR TCA 90 bp GCAGTGACCCGCTGGCCCCATGTCATATCCGGAACTCCAATCACAGCCACATCTCAGGGACGGTCTCCTTaGGCTGCAACAACTGGCCCG +
Preference number: 2 (lower is better)
Translates to: AVTRWPHVISGTPITATSQGRSP*AATTGP
Trigger: CGGGCCAGTTGTTGCAGCTCAAGGAGACCGTCCCTG...AGATGTGGCTGTGATTGGAGTTCCGGATATGACATGGGGCCAGCGGGTCACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542688.5
3UTR-3UTR TCA 90 bp TTTAATGGGGAGGGAGGAGAGGATGAGTTCCCTCCAGGACGGGCTTGTTCTCGGCAGGGACGGTCTCCTTaGGCTGCAACAACTGGCCCG +
Preference number: 2 (lower is better)
Translates to: FNGEGGEDEFPPGRACSRQGRSP*AATTGP
Trigger: CGGGCCAGTTGTTGCAGCTCAAGGAGACCGTCCCTG...CCGAGAACAAGCCCGTCCTGGAGGGAACTCATCCTCTCCTCCCTCCCCATTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR TCA 90 bp TCTCTTGTGGCTGCTGTGGTCCACACCTGTCTGCACACGCCTCCTGTTACTGATCACAAGGCCACACCGTaGGGCAGGAGTTCGGGTGGG +
Preference number: 2 (lower is better)
Translates to: SLVAAVVHTCLHTPPVTDHKATP*GRSSGG
Trigger: CCCACCCGAACTCCTGCCTCACGGTGTGGCCTTGTG...ATCAGTAACAGGAGGCGTGTGCAGACAGGTGTGGACCACAGCAGCCACAAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR-3UTR GCA 90 bp ACAACTGGCCCGAGGCTGGGGACCCCACATGGTGATTTCATCCCAAACAGTTCTGAAGGGGACGTCTGCTaGTCCCCACCAGACCCGCAG +
Preference number: 2 (lower is better)
Translates to: TTGPRLGTPHGDFIPNSSEGDVC*SPPDPQ
Trigger: CTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTC...AGAACTGTTTGGGATGAAATCACCATGTGGGGTCCCCAGCCTCGGGCCAGTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR GCA 90 bp TTAGAACACGGCATTCAACCGCATGTCCTTGGAGCACCGTATTCTGGTCAACCGCTGTGGGGCGGGAGGTaGCTCAGCACGTGGGGCCAG +
Preference number: 2 (lower is better)
Translates to: LEHGIQPHVLGAPYSGQPLWGGR*LSTWGQ
Trigger: CTGGCCCCACGTGCTGAGGCACCTCCCGCCCCACAG...CGGTTGACCAGAATACGGTGCTCCAAGGACATGCGGTTGAATGCCGTGTTCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp ACATGCTCAAGTGAGCAGGGGCCCCAGGCCACGTCCAACTGTCCGCGAGGCATGGGGGGCAGAATGTTCTaGGTAAGTTCAGGCCAGACA +
Preference number: 2 (lower is better)
Translates to: TCSSEQGPQATSNCPRGMGGRMF*VSSGQT
Trigger: TGTCTGGCCTGAACTTACCCAGAACATTCTGCCCCC...CATGCCTCGCGGACAGTTGGACGTGGCCTGGGGCCCCTGCTCACTTGAGCATGT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp ATAAACTGGGCTTTAATGGGGAGGGAGGAGAGGATGAGTTCCCTCCAGGACGGGAGCCTGAGATGGGGCTaGCCTCCTGCCCGGCACACT +
Preference number: 2 (lower is better)
Translates to: INWALMGREERMSSLQDGSLRWG*PPARHT
Trigger: AGTGTGCCGGGCAGGAGGCCAGCCCCATCTCAGGCT...CCCGTCCTGGAGGGAACTCATCCTCTCCTCCCTCCCCATTAAAGCCCAGTTTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp CTGACTGTTCCCGGGGTCAGGCCATGGGGATGCACAAGGCCACACCGTGAGGCACTCAGACAAGCTTGGTaGGCGACATGCTCAAGTGAG +
Preference number: 2 (lower is better)
Translates to: LTVPGVRPWGCTRPHREALRQAW*ATCSSE
Trigger: CTCACTTGAGCATGTCGCCCACCAAGCTTGTCTGAG...TGCCTCACGGTGTGGCCTTGTGCATCCCCATGGCCTGACCCCGGGAACAGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp TCTCTTGTGGCTGCTGTGGTCCACACCTGTCTGCACACGCCTCCTGTTACTGATGGCCTGGCTGGGCACTaGCGGACTGTGTGCACGAAG +
Preference number: 2 (lower is better)
Translates to: SLVAAVVHTCLHTPPVTDGLAGH*RTVCTK
Trigger: CTTCGTGCACACAGTCCGCCAGTGCCCAGCCAGGCC...ATCAGTAACAGGAGGCGTGTGCAGACAGGTGTGGACCACAGCAGCCACAAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR-3UTR CCA 90 bp GTCACCACAGCAGTGACCCGCTGGCCCCATGTCATATCCGGAACTCCAATCACATCTGTGATGCTGGGGTaGGCCAGCAGGTGCCACTCC +
Preference number: 2 (lower is better)
Translates to: VTTAVTRWPHVISGTPITSVMLG*ASRCHS
Trigger: GGAGTGGCACCTGCTGGCCCACCCCAGCATCACAGA...TGTGATTGGAGTTCCGGATATGACATGGGGCCAGCGGGTCACTGCTGTGGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542688.5
3UTR-3UTR TCA 90 bp CTGGCCTCCTGCCCGGCACACTCGTTTCTGGCCACTCTTTCAGACGTGCATTCCCACAACACACCTTCCTaGGGTTTCTGCATCGGCCAC +
Preference number: 2 (lower is better)
Translates to: LASCPAHSFLATLSDVHSHNTPS*GFCIGH
Trigger: GTGGCCGATGCAGAAACCTCAGGAAGGTGTGTTGTG...GGAATGCACGTCTGAAAGAGTGGCCAGAAACGAGTGTGCCGGGCAGGAGGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR GCA 90 bp CACTCTTTCAGACGTGCATTCCGGGGGCAGAATGTTCTGGGTAAGTTCAGGCCAGAAGGGGACGTCTGCTaGTCCCCACCAGACCCGCAG +
Preference number: 2 (lower is better)
Translates to: HSFRRAFRGQNVLGKFRPEGDVC*SPPDPQ
Trigger: CTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTC...TGGCCTGAACTTACCCAGAACATTCTGCCCCCGGAATGCACGTCTGAAAGAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR GCA 90 bp CATTCCGGGGGCAGAATGTTCTGGGTAAGTTCAGGCCAGACACTGCTGGGCGATCCCCACAGTGGGAGCTaGTCTCCTCCAAGAGCAGCA +
Preference number: 2 (lower is better)
Translates to: HSGGRMFWVSSGQTLLGDPHSGS*SPPRAA
Trigger: TGCTGCTCTTGGAGGAGAGCAGCTCCCACTGTGGGG...ATCGCCCAGCAGTGTCTGGCCTGAACTTACCCAGAACATTCTGCCCCCGGAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR GCA 90 bp CATTCCGGGGGCAGAATGTTCTGGGTAAGTTCAGGCCAGACACTGCTGGGCGATGGACACACAGTAGTGTaGAGGGTGGCAGGTGTCCCC +
Preference number: 2 (lower is better)
Translates to: HSGGRMFWVSSGQTLLGDGHTVV*RVAGVP
Trigger: GGGGACACCTGCCACCCTGCACACTACTGTGTGTCC...ATCGCCCAGCAGTGTCTGGCCTGAACTTACCCAGAACATTCTGCCCCCGGAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR GCA 90 bp GAGGCAGAGCAGGCTCAGGTCTTGTGTGTTGGGCCTGGACACCTGGCAGGAAGGGTTCAGGCCAGACACTaGTGGGCGATGACTGTTACT +
Preference number: 2 (lower is better)
Translates to: EAEQAQVLCVGPGHLAGRVQARH*WAMTVT
Trigger: AGTAACAGTCATCGCCCAGCAGTGTCTGGCCTGAAC...CCTTCCTGCCAGGTGTCCAGGCCCAACACACAAGACCTGAGCCTGCTCTGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR-3UTR GCA 90 bp ACTGTGCAAAAGTCACTGCACCTGCAGCCGACTGTAGCTTTGCTCTTGGACGGGATGGGGCTGGCCTCCTaGCCGGCACACTCGTTTCTG +
Preference number: 2 (lower is better)
Translates to: TVQKSLHLQPTVALLLDGMGLAS*PAHSFL
Trigger: CAGAAACGAGTGTGCCGGGCAGGAGGCCAGCCCCAT...CCCGTCCAAGAGCAAAGCTACAGTCGGCTGCAGGTGCAGTGACTTTTGCACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR-3UTR GCA 90 bp ACTGTGCAAAAGTCACTGCACCTGCAGCCGACTGTAGCTTTGCTCTTGGACGGGGCTTGGTGGGCGACATaGTCAAGTGAGCAGGGGCCC +
Preference number: 2 (lower is better)
Translates to: TVQKSLHLQPTVALLLDGAWWAT*SSEQGP
Trigger: GGGCCCCTGCTCACTTGAGCATGTCGCCCACCAAGC...CCCGTCCAAGAGCAAAGCTACAGTCGGCTGCAGGTGCAGTGACTTTTGCACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR-3UTR CCA 90 bp TCTCTTGTGGCTGCTGTGGTCCACACCTGTCTGCACACGCCTCCTGTTACTGATCCCAGACCTCCTATGTaGGCCGGGAGACACTGGCTC +
Preference number: 2 (lower is better)
Translates to: SLVAAVVHTCLHTPPVTDPRPPM*AGRHWL
Trigger: GAGCCAGTGTCTCCCGGCCCACATAGGAGGTCTGGG...ATCAGTAACAGGAGGCGTGTGCAGACAGGTGTGGACCACAGCAGCCACAAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR-3UTR CCA 90 bp TTTAATGGGGAGGGAGGAGAGGATGAGTTCCCTCCAGGACGGGCTTGTTCTCGGGGTGTGGAGATGACCTaGAAAGTCCCTGCGCTGGGG +
Preference number: 2 (lower is better)
Translates to: FNGEGGEDEFPPGRACSRGVEMT*KVPALG
Trigger: CCCCAGCGCAGGGACTTTCCAGGTCATCTCCACACC...CCGAGAACAAGCCCGTCCTGGAGGGAACTCATCCTCTCCTCCCTCCCCATTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp TTTAATGGGGAGGGAGGAGAGGATGAGTTCCCTCCAGGACGGGCTTGTTCTCGGCACCGGCTGAGGGGCTaGTGTGGAGATGACCTGGAA +
Preference number: 2 (lower is better)
Translates to: FNGEGGEDEFPPGRACSRHRLRG*CGDDLE
Trigger: TTCCAGGTCATCTCCACACCAGCCCCTCAGCCGGTG...CCGAGAACAAGCCCGTCCTGGAGGGAACTCATCCTCTCCTCCCTCCCCATTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR TCA 90 bp TGCACACGCCTCCTGTTACTGATGGTTAACTCAGTGGCTGGCACACTCACCACCGACACTGCTGGGCGATaGCTGTTACTTCCCCCAGGC +
Preference number: 2 (lower is better)
Translates to: CTRLLLLMVNSVAGTLTTDTAGR*LLLPPG
Trigger: GCCTGGGGGAAGTAACAGTCATCGCCCAGCAGTGTC...GGTGGTGAGTGTGCCAGCCACTGAGTTAACCATCAGTAACAGGAGGCGTGTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR-3UTR GCA 90 bp CATTCCGGGGGCAGAATGTTCTGGGTAAGTTCAGGCCAGACACTGCTGGGCGATACGGTCTCCTTGAGCTaGAACAACTGGCCCGAGGCT +
Preference number: 2 (lower is better)
Translates to: HSGGRMFWVSSGQTLLGDTVSLS*NNWPEA
Trigger: AGCCTCGGGCCAGTTGTTGCAGCTCAAGGAGACCGT...ATCGCCCAGCAGTGTCTGGCCTGAACTTACCCAGAACATTCTGCCCCCGGAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR GCA 90 bp GAATTGGCCCCGCTAAGTAAATGCAACGTGGGTGCACCCAACATTCACAACACAGGAGAGCCTGGCAACTaGAGGGCACTGTGGGGCGGG +
Preference number: 2 (lower is better)
Translates to: ELAPLSKCNVGAPNIHNTGEPGN*RALWGG
Trigger: CCCGCCCCACAGTGCCCTGCAGTTGCCAGGCTCTCC...TGTGTTGTGAATGTTGGGTGCACCCACGTTGCATTTACTTAGCGGGGCCAATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR GCA 90 bp ATAAACTGGGCTTTAATGGGGAGGGAGGAGAGGATGAGTTCCCTCCAGGACGGGGAAACCTCTGGGACCTaGCCTGGAGAGCCTGGCAAC +
Preference number: 2 (lower is better)
Translates to: INWALMGREERMSSLQDGETSGT*PGEPGN
Trigger: GTTGCCAGGCTCTCCAGGGCAGGTCCCAGAGGTTTC...CCCGTCCTGGAGGGAACTCATCCTCTCCTCCCTCCCCATTAAAGCCCAGTTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR GCA 90 bp GGCTGTGGGGAGGAGGCAGCCTATTCTTCTGAAAATTGTCCAGAAACTTCTGGAGGCCCCCTGGGTGGCTaGCCAGACCTCCTATGTGGG +
Preference number: 2 (lower is better)
Translates to: GCGEEAAYSSENCPETSGGPLGG*PDLLCG
Trigger: CCCACATAGGAGGTCTGGGCAGCCACCCAGGGGGCC...TCCAGAAGTTTCTGGACAATTTTCAGAAGAATAGGCTGCCTCCTCCCCACAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR GCA 90 bp AGAATGTTCTGGGTAAGTTCAGGCCAGACACTGCTGGGCGATGACTGTTACTTCGGCCCCCTGGGTGGCTaGCCAGACCTCCTATGTGGG +
Preference number: 2 (lower is better)
Translates to: RMFWVSSGQTLLGDDCYFGPLGG*PDLLCG
Trigger: CCCACATAGGAGGTCTGGGCAGCCACCCAGGGGGCC...GAAGTAACAGTCATCGCCCAGCAGTGTCTGGCCTGAACTTACCCAGAACATTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR GCA 90 bp TCCGGGGGCAGAATGTTCTGGGTAAGTTCAGGCCAGACACTGCTGGGCGATGACGCCCCGCTAAGTAAATaGAACGTGGGTGCACCCAAC +
Preference number: 2 (lower is better)
Translates to: SGGRMFWVSSGQTLLGDDAPLSK*NVGAPN
Trigger: GTTGGGTGCACCCACGTTGCATTTACTTAGCGGGGC...GTCATCGCCCAGCAGTGTCTGGCCTGAACTTACCCAGAACATTCTGCCCCCGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp TTAGAACACGGCATTCAACCGCATGTCCTTGGAGCACCGTATTCTGGTCAACCGAGGGAGGCCAGGTCTTaGACGGGCCCCCGTGGTTCT +
Preference number: 2 (lower is better)
Translates to: LEHGIQPHVLGAPYSGQPREARS*TGPRGS
Trigger: AGAACCACGGGGGCCCGTCCAAGACCTGGCCTCCCT...CGGTTGACCAGAATACGGTGCTCCAAGGACATGCGGTTGAATGCCGTGTTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp GAATTGGCCCCGCTAAGTAAATGCAACGTGGGTGCACCCAACATTCACAACACACATCGGCCACGCCTGTaGGCTCCGGAGCTGGGTCTG +
Preference number: 2 (lower is better)
Translates to: ELAPLSKCNVGAPNIHNTHRPRL*APELGL
Trigger: CAGACCCAGCTCCGGAGCCCACAGGCGTGGCCGATG...TGTGTTGTGAATGTTGGGTGCACCCACGTTGCATTTACTTAGCGGGGCCAATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp TTTCCCAACAGAAGGCATTTCCTTAGCTACCAGCAAGGCCTAGACACAAACGTCGGTGGGGCAGGGCCGTaGACTGGGGCACCCACCAGT +
Preference number: 2 (lower is better)
Translates to: FPNRRHFLSYQQGLDTNVGGAGP*TGAPTS
Trigger: ACTGGTGGGTGCCCCAGTCCACGGCCCTGCCCCACC...GACGTTTGTGTCTAGGCCTTGCTGGTAGCTAAGGAAATGCCTTCTGTTGGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp CCCCTTTCTCTGGCAACATTTCTGCCATTTCCGGCAGAGCAGGTGCTCAGAGGCAGACAGGGTTGGAACTaGCTGAGCTGGGAGGTCCTC +
Preference number: 2 (lower is better)
Translates to: PLSLATFLPFPAEQVLRGRQGWN*LSWEVL
Trigger: GAGGACCTCCCAGCTCAGCCAGTTCCAACCCTGTCT...GCCTCTGAGCACCTGCTCTGCCGGAAATGGCAGAAATGTTGCCAGAGAAAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543676.1
3UTR-3UTR TCA 90 bp ATAAACTGGGCTTTAATGGGGAGGGAGGAGAGGATGAGTTCCCTCCAGGACGGGCTGGACTGTAGTCTCTaGCTGCCGTTCCCTTGGGTC +
Preference number: 2 (lower is better)
Translates to: INWALMGREERMSSLQDGLDCSL*LPFPWV
Trigger: GACCCAAGGGAACGGCAGTCAGAGACTACAGTCCAG...CCCGTCCTGGAGGGAACTCATCCTCTCCTCCCTCCCCATTAAAGCCCAGTTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp TTAGAACACGGCATTCAACCGCATGTCCTTGGAGCACCGTATTCTGGTCAACCGTTGAGCTGCAACAACTaGCCCGAGGCTGGGGACCCC +
Preference number: 2 (lower is better)
Translates to: LEHGIQPHVLGAPYSGQPLSCNN*PEAGDP
Trigger: GGGGTCCCCAGCCTCGGGCCAGTTGTTGCAGCTCAA...CGGTTGACCAGAATACGGTGCTCCAAGGACATGCGGTTGAATGCCGTGTTCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp GGCTGTGGGGAGGAGGCAGCCTATTCTTCTGAAAATTGTCCAGAAACTTCTGGAAACTGCAGGGCACTGTaGGGCGGGAGGTGCCTCAGC +
Preference number: 2 (lower is better)
Translates to: GCGEEAAYSSENCPETSGNCRAL*GGRCLS
Trigger: GCTGAGGCACCTCCCGCCCCACAGTGCCCTGCAGTT...TCCAGAAGTTTCTGGACAATTTTCAGAAGAATAGGCTGCCTCCTCCCCACAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp CTGGAAAACAGGGCTGGGACGCTGCTCTGTGGCCTCAGACAAGCTTGGTGGGCGTTGTCCAGAAACTTCTaGATTCTGCATGTGGCCCCT +
Preference number: 2 (lower is better)
Translates to: LENRAGTLLCGLRQAWWALSRNF*ILHVAP
Trigger: AGGGGCCACATGCAGAATCCAGAAGTTTCTGGACAA...CGCCCACCAAGCTTGTCTGAGGCCACAGAGCAGCGTCCCAGCCCTGTTTTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp TTTAATGGGGAGGGAGGAGAGGATGAGTTCCCTCCAGGACGGGCTTGTTCTCGGTGGAGCACCGTATTCTaGTCAACCGGCTGGTCAACG +
Preference number: 2 (lower is better)
Translates to: FNGEGGEDEFPPGRACSRWSTVF*STGWST
Trigger: CGTTGACCAGCCGGTTGACCAGAATACGGTGCTCCA...CCGAGAACAAGCCCGTCCTGGAGGGAACTCATCCTCTCCTCCCTCCCCATTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR TCA 90 bp GGCTGTGGGGAGGAGGCAGCCTATTCTTCTGAAAATTGTCCAGAAACTTCTGGACAGGGACGGTCTCCTTaGGCTGCAACAACTGGCCCG +
Preference number: 2 (lower is better)
Translates to: GCGEEAAYSSENCPETSGQGRSP*AATTGP
Trigger: CGGGCCAGTTGTTGCAGCTCAAGGAGACCGTCCCTG...TCCAGAAGTTTCTGGACAATTTTCAGAAGAATAGGCTGCCTCCTCCCCACAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR TCA 90 bp CATTCCGGGGGCAGAATGTTCTGGGTAAGTTCAGGCCAGACACTGCTGGGCGATCTGGGGAAAAGCTGGTaGGCCACAGACATGAAATGG +
Preference number: 2 (lower is better)
Translates to: HSGGRMFWVSSGQTLLGDLGKSW*ATDMKW
Trigger: CCATTTCATGTCTGTGGCTCACCAGCTTTTCCCCAG...ATCGCCCAGCAGTGTCTGGCCTGAACTTACCCAGAACATTCTGCCCCCGGAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp AGAATGTTCTGGGTAAGTTCAGGCCAGACACTGCTGGGCGATGACTGTTACTTCTTGAGCTGCAACAACTaGCCCGAGGCTGGGGACCCC +
Preference number: 2 (lower is better)
Translates to: RMFWVSSGQTLLGDDCYFLSCNN*PEAGDP
Trigger: GGGGTCCCCAGCCTCGGGCCAGTTGTTGCAGCTCAA...GAAGTAACAGTCATCGCCCAGCAGTGTCTGGCCTGAACTTACCCAGAACATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp TTTCCCAACAGAAGGCATTTCCTTAGCTACCAGCAAGGCCTAGACACAAACGTCAACTGCAGGGCACTGTaGGGCGGGAGGTGCCTCAGC +
Preference number: 2 (lower is better)
Translates to: FPNRRHFLSYQQGLDTNVNCRAL*GGRCLS
Trigger: GCTGAGGCACCTCCCGCCCCACAGTGCCCTGCAGTT...GACGTTTGTGTCTAGGCCTTGCTGGTAGCTAAGGAAATGCCTTCTGTTGGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp GCAGTGACCCGCTGGCCCCATGTCATATCCGGAACTCCAATCACAGCCACATCTCCTCGGATCCAGTACTaGCCATCCTTAAACACCACG +
Preference number: 2 (lower is better)
Translates to: AVTRWPHVISGTPITATSPRIQY*PSLNTT
Trigger: CGTGGTGTTTAAGGATGGCCAGTACTGGATCCGAGG...AGATGTGGCTGTGATTGGAGTTCCGGATATGACATGGGGCCAGCGGGTCACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542688.5
3UTR-3UTR CCA 90 bp ACTGTGCAAAAGTCACTGCACCTGCAGCCGACTGTAGCTTTGCTCTTGGACGGGACCTCGTCTCTCTTGTaGCTGCTGTGGTCCACACCT +
Preference number: 2 (lower is better)
Translates to: TVQKSLHLQPTVALLLDGTSSLL*LLWSTP
Trigger: AGGTGTGGACCACAGCAGCCACAAGAGAGACGAGGT...CCCGTCCAAGAGCAAAGCTACAGTCGGCTGCAGGTGCAGTGACTTTTGCACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR-3UTR TCA 90 bp TGGCAACATTTCTGCCATTTCCGGCAGAGCAGGTGCTCAGAGGCAGGAGTGTCATGCTGGGGACATTTCTaGCTAGATGGTGTCCCCAAC +
Preference number: 2 (lower is better)
Translates to: WQHFCHFRQSRCSEAGVSCWGHF*LDGVPN
Trigger: GTTGGGGACACCATCTAGTCAGAAATGTCCCCAGCA...TGACACTCCTGCCTCTGAGCACCTGCTCTGCCGGAAATGGCAGAAATGTTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543676.1
3UTR-3UTR CCA 90 bp GGCTGTGGGGAGGAGGCAGCCTATTCTTCTGAAAATTGTCCAGAAACTTCTGGACAACTGGCCCGAGGCTaGGGACCCCACATGGTGATT +
Preference number: 2 (lower is better)
Translates to: GCGEEAAYSSENCPETSGQLARG*GPHMVI
Trigger: AATCACCATGTGGGGTCCCCAGCCTCGGGCCAGTTG...TCCAGAAGTTTCTGGACAATTTTCAGAAGAATAGGCTGCCTCCTCCCCACAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp TTAGAACACGGCATTCAACCGCATGTCCTTGGAGCACCGTATTCTGGTCAACCGTTTGTGGGAAACCTCTaGGACCTGCCCTGGAGAGCC +
Preference number: 2 (lower is better)
Translates to: LEHGIQPHVLGAPYSGQPFVGNL*DLPWRA
Trigger: GGCTCTCCAGGGCAGGTCCCAGAGGTTTCCCACAAA...CGGTTGACCAGAATACGGTGCTCCAAGGACATGCGGTTGAATGCCGTGTTCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp AGAATGTTCTGGGTAAGTTCAGGCCAGACACTGCTGGGCGATGACTGTTACTTCGCCACAGACATGAAATaGGGGCCATGGGGCAGGTGG +
Preference number: 2 (lower is better)
Translates to: RMFWVSSGQTLLGDDCYFATDMK*GPWGRW
Trigger: CCACCTGCCCCATGGCCCCCATTTCATGTCTGTGGC...GAAGTAACAGTCATCGCCCAGCAGTGTCTGGCCTGAACTTACCCAGAACATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp GGCTGTGGGGAGGAGGCAGCCTATTCTTCTGAAAATTGTCCAGAAACTTCTGGATGTGGGCTCCGGAGCTaGGTCTGGGGAAAAGCTGGT +
Preference number: 2 (lower is better)
Translates to: GCGEEAAYSSENCPETSGCGLRS*VWGKAG
Trigger: ACCAGCTTTTCCCCAGACCCAGCTCCGGAGCCCACA...TCCAGAAGTTTCTGGACAATTTTCAGAAGAATAGGCTGCCTCCTCCCCACAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp CTGGCAACATTTCTGCCATTTCCGGCAGAGCAGGTGCTCAGAGGCAGGAGTGTCACATTTCTGACTAGATaGTGTCCCCAACCCAGGCAC +
Preference number: 2 (lower is better)
Translates to: LATFLPFPAEQVLRGRSVTFLTR*CPQPRH
Trigger: GTGCCTGGGTTGGGGACACCATCTAGTCAGAAATGT...GACACTCCTGCCTCTGAGCACCTGCTCTGCCGGAAATGGCAGAAATGTTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543676.1
3UTR-3UTR TCA 90 bp ATGGGCAAAGAACTGGAACAGGTGACTTGCAGGAAAATCAAATGGCCCAGAAACGGGCTGGTGTGGAGATaGCCTGGAAAGTCCCTGCGC +
Preference number: 2 (lower is better)
Translates to: MGKELEQVTCRKIKWPRNGLVWR*PGKSLR
Trigger: GCGCAGGGACTTTCCAGGTCATCTCCACACCAGCCC...GTTTCTGGGCCATTTGATTTTCCTGCAAGTCACCTGTTCCAGTTCTTTGCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR-3UTR TCA 90 bp AGGCCAAGATGGGGAATAAACTGGGCTTTAATGGGGAGGGAGGAGAGGATGAGTCACAACACACCTTCCTaGGGTTTCTGCATCGGCCAC +
Preference number: 2 (lower is better)
Translates to: RPRWGINWALMGREERMSHNTPS*GFCIGH
Trigger: GTGGCCGATGCAGAAACCTCAGGAAGGTGTGTTGTG...ACTCATCCTCTCCTCCCTCCCCATTAAAGCCCAGTTTATTCCCCATCTTGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR-3UTR TCA 90 bp TGCACACGCCTCCTGTTACTGATGGTTAACTCAGTGGCTGGCACACTCACCACCTGGGGTCAGAACTGGTaGCTTTCCAGATTCAAGCCA +
Preference number: 2 (lower is better)
Translates to: CTRLLLLMVNSVAGTLTTWGQNW*LSRFKP
Trigger: TGGCTTGAATCTGGAAAGTCACCAGTTCTGACCCCA...GGTGGTGAGTGTGCCAGCCACTGAGTTAACCATCAGTAACAGGAGGCGTGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR-3UTR GCA 90 bp TTAGAACACGGCATTCAACCGCATGTCCTTGGAGCACCGTATTCTGGTCAACCGAGCAGCACCAGGAAATaGACGGAACCCATGGGACAG +
Preference number: 2 (lower is better)
Translates to: LEHGIQPHVLGAPYSGQPSSTRK*TEPMGQ
Trigger: CTGTCCCATGGGTTCCGTGCATTTCCTGGTGCTGCT...CGGTTGACCAGAATACGGTGCTCCAAGGACATGCGGTTGAATGCCGTGTTCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CCA 90 bp GAATTGGCCCCGCTAAGTAAATGCAACGTGGGTGCACCCAACATTCACAACACAGGACAGGGCTGGTTCTaGGAGGCTTGTGAACCCTCA +
Preference number: 2 (lower is better)
Translates to: ELAPLSKCNVGAPNIHNTGQGWF*EACEPS
Trigger: TGAGGGTTCACAAGCCTCCCAGAACCAGCCCTGTCC...TGTGTTGTGAATGTTGGGTGCACCCACGTTGCATTTACTTAGCGGGGCCAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR CAA 90 bp GTCCAGAAACTTCTGGATTCTGCATGTGGCCCCTGTGCATCTGAATaGGCCCCGCTAAGTAAATGCAACGTGGGTGCACCCAACATTCAC +
Preference number: 2 (lower is better)
Translates to: VQKLLDSACGPCASE*APLSKCNVGAPNIH
Trigger: GTGAATGTTGGGTGCACCCACGTTGCATTTACTTAGCGGGGCCAATTCAGATGCACAGGGGCCACATGCAGAATCCAGAAGTTTCTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR TCA 90 bp TTAGAACACGGCATTCAACCGCATGTCCTTGGAGCACCGTATTCTGGTCAACCGGGGGACCCCACATGGTaGTTTCATCCCAAACAGTTC +
Preference number: 2 (lower is better)
Translates to: LEHGIQPHVLGAPYSGQPGDPTW*FHPKQF
Trigger: GAACTGTTTGGGATGAAATCACCATGTGGGGTCCCC...CGGTTGACCAGAATACGGTGCTCCAAGGACATGCGGTTGAATGCCGTGTTCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR GCA 90 bp CTCCTTGGAAGGCATCAGGCAAAATCAAGTAAGTGGAAGACATCTGGGCCTACGTGGTCCACACCTGTCTaGACACGCCTCCTGTTACTG +
Preference number: 2 (lower is better)
Translates to: LLGRHQAKSSKWKTSGPTWSTPV*TRLLLL
Trigger: CAGTAACAGGAGGCGTGTGCAGACAGGTGTGGACCA...CGTAGGCCCAGATGTCTTCCACTTACTTGATTTTGCCTGATGCCTTCCAAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR-3UTR CCA 90 bp ATGGGCAAAGAACTGGAACAGGTGACTTGCAGGAAAATCAAATGGCCCAGAAACTGTTGGGTGGGAACGTaGGGCCAGCTTGGCACTCCT +
Preference number: 2 (lower is better)
Translates to: MGKELEQVTCRKIKWPRNCWVGT*GQLGTP
Trigger: AGGAGTGCCAAGCTGGCCCCACGTTCCCACCCAACA...GTTTCTGGGCCATTTGATTTTCCTGCAAGTCACCTGTTCCAGTTCTTTGCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR-3UTR CCA 90 bp TTTCCCAACAGAAGGCATTTCCTTAGCTACCAGCAAGGCCTAGACACAAACGTCCAGGCCAGACACTGCTaGGCGATGACTGTTACTTCC +
Preference number: 2 (lower is better)
Translates to: FPNRRHFLSYQQGLDTNVQARHC*AMTVTS
Trigger: GGAAGTAACAGTCATCGCCCAGCAGTGTCTGGCCTG...GACGTTTGTGTCTAGGCCTTGCTGGTAGCTAAGGAAATGCCTTCTGTTGGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CAA 90 bp GCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGAAGGGAGGCCAGGTCTaGGACGGGCCCCCGTGGTTC +
Preference number: 3 (lower is better)
Translates to: ARGARGWLHRAAQMRSAVKGGQV*DGPPWF
Trigger: GAACCACGGGGGCCCGTCCAAGACCTGGCCTCCCTT...CACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
3UTR CCA 72 bp ACCTGCCCTGGAGAGCCTGGCAACTGCAGGGCACTGTaGGGCGGGAGGTGCCTCAGCACGTGGGGCCAGGGG +
Preference number: 3 (lower is better)
Translates to: TCPGEPGNCRAL*GGRCLSTWGQG
Trigger: CCCCTGGCCCCACGTGCTGAGGCACCTCCCGCCCCACAGTGCCCTGCAGTTGCCAGGCTCTCCAGGGCAGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CAA 90 bp GCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAAGGGAGGCCAGGTCTaGGACGGGCCCCCGTGGTTC +
Preference number: 3 (lower is better)
Translates to: ARGWLHRAAQMRSAVTRQKGGQV*DGPPWF
Trigger: GAACCACGGGGGCCCGTCCAAGACCTGGCCTCCCTT...CTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
3UTR GCA 72 bp GGAACCAGGGGCCTGGCTGGGCACTGGCGGACTGTGTaGACGAAGGCCGACCAGCCTGGCACAGGGACCAGC +
Preference number: 3 (lower is better)
Translates to: GTRGLAGHWRTV*TKADQPGTGTS
Trigger: GCTGGTCCCTGTGCCAGGCTGGTCGGCCTTCGTGCACACAGTCCGCCAGTGCCCAGCCAGGCCCCTGGTTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR CCA 72 bp GATGCACAAGGCCACACCGTGAGGCAGGAGTTCGGGTaGGGCAGGGCCGTGGACTGGGGCACCCACCAGTCC +
Preference number: 3 (lower is better)
Translates to: DAQGHTVRQEFG*GRAVDWGTHQS
Trigger: GGACTGGTGGGTGCCCCAGTCCACGGCCCTGCCCCACCCGAACTCCTGCCTCACGGTGTGGCCTTGTGCATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CAA 90 bp GGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGAAGGGAGGCCAGGTCTaGGACGGGCCCCCGTGGTTC +
Preference number: 3 (lower is better)
Translates to: GSRCEGDVCCSPPDPQSQKGGQV*DGPPWF
Trigger: GAACCACGGGGGCCCGTCCAAGACCTGGCCTCCCTT...CTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACACCGAGAACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CAA 90 bp GGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGCCAGGGACGGTCTCCTaGAGCTGCAACAACTGGCCC +
Preference number: 3 (lower is better)
Translates to: GLAAPRCTDEVGGDQAEVPGTVS*SCNNWP
Trigger: GGGCCAGTTGTTGCAGCTCAAGGAGACCGTCCCTGG...CACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
3UTR GCA 72 bp GGGTGGGAACGTGGGGCCAGCTTGGCACTCCTGAGCTaGCTCAGGCCTGGCCTGTCTAGGCCTCAGTGGACC +
Preference number: 3 (lower is better)
Translates to: GWERGASLALLS*LRPGLSRPQWT
Trigger: GGTCCACTGAGGCCTAGACAGGCCAGGCCTGAGGCAGCTCAGGAGTGCCAAGCTGGCCCCACGTTCCCACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR GCA 72 bp CACACCGCCCACTGCCTCACTCCGTGCTGTGCCTGGTaGTGCGTGGGTCCTGAGGCTCCTGCTCCTGACCCT +
Preference number: 3 (lower is better)
Translates to: HTAHCLTPCCAW*CVGPEAPAPDP
Trigger: AGGGTCAGGAGCAGGAGCCTCAGGACCCACGCAGCACCAGGCACAGCACGGAGTGAGGCAGTGGGCGGTGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR GCA 72 bp CACAGCGCTTGCCACACCGCCCACTGCCTCACTCCGTaGTGTGCCTGGTGCTGCGTGGGTCCTGAGGCTCCT +
Preference number: 3 (lower is better)
Translates to: HSACHTAHCLTP*CAWCCVGPEAP
Trigger: AGGAGCCTCAGGACCCACGCAGCACCAGGCACAGCACGGAGTGAGGCAGTGGGCGGTGTGGCAAGCGCTGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR CCA 72 bp TGGCTGCCCAGACCTCCTATGTGGGCCGGGAGACACTaGCTCTGGGTGAGGCACAGGCACGTGCAGACGGCG +
Preference number: 3 (lower is better)
Translates to: WLPRPPMWAGRH*LWVRHRHVQTA
Trigger: CGCCGTCTGCACGTGCCTGTGCCTCACCCAGAGCCAGTGTCTCCCGGCCCACATAGGAGGTCTGGGCAGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR CCA 72 bp CAGGCTGAGCCCCGTCCCTGCAGACAGGGTTGGAACTaGCTGAGCTGGGAGGTCCTCGAGTTGGGGGCAGGG +
Preference number: 3 (lower is better)
Translates to: QAEPRPCRQGWN*LSWEVLELGAG
Trigger: CCCTGCCCCCAACTCGAGGACCTCCCAGCTCAGCCAGTTCCAACCCTGTCTGCAGGGACGGGGCTCAGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543676.1
3UTR CCA 72 bp ATCCCCTGGTGCCTGAGAGAAGCTGGGCCACCCGCCTaGGAGCAGCTCCTGGCAGCACCCCTGTGTCTGGCT +
Preference number: 3 (lower is better)
Translates to: IPWCLREAGPPA*EQLLAAPLCLA
Trigger: AGCCAGACACAGGGGTGCTGCCAGGAGCTGCTCCCAGGCGGGTGGCCCAGCTTCTCTCAGGCACCAGGGGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR CCA 72 bp CTGAGCTGCCTCAGGCCTGGCCTGTCTAGGCCTCAGTaGACCGGCCAGCCTAATGCCTGGGCTGCTGGCCTG +
Preference number: 3 (lower is better)
Translates to: LSCLRPGLSRPQ*TGQPNAWAAGL
Trigger: CAGGCCAGCAGCCCAGGCATTAGGCTGGCCGGTCCACTGAGGCCTAGACAGGCCAGGCCTGAGGCAGCTCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR-3UTR CAA 90 bp GCCAGGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCCCAGGGACGGTCTCCTaGAGCTGCAACAACTGGCCC +
Preference number: 3 (lower is better)
Translates to: ARSWTGPRGSRCEGDVCCPGTVS*SCNNWP
Trigger: GGGCCAGTTGTTGCAGCTCAAGGAGACCGTCCCTGG...GCAGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CAA 90 bp GAGGCAGAGCAGGCTCAGGTCTTGTGTGTTGGGCCTGGACACCTGGCAGGAAGGCCCCAAGGGCCGCTGTaGGGTGGGAACGTGGGGCCA +
Preference number: 3 (lower is better)
Translates to: EAEQAQVLCVGPGHLAGRPQGPL*GGNVGP
Trigger: TGGCCCCACGTTCCCACCCAACAGCGGCCCTTGGGG...CCTTCCTGCCAGGTGTCCAGGCCCAACACACAAGACCTGAGCCTGCTCTGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR TCA 72 bp TCCTCTCAGGCTCCCAGCAAAGGAGGCCGGCAGCTTTaGCACGAGGGTCCGGGAGCCGTGGCTCCTCCAGGT +
Preference number: 3 (lower is better)
Translates to: SSQAPSKGGRQL*HEGPGAVAPPG
Trigger: ACCTGGAGGAGCCACGGCTCCCGGACCCTCGTGTCAAAGCTGCCGGCCTCCTTTGCTGGGAGCCTGAGAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR GCA 72 bp GTGTCCCCAACCCAGGCACAGGCTGAGCCCCGTCCCTaGAGACAGGGTTGGAACTGGCTGAGCTGGGAGGTC +
Preference number: 3 (lower is better)
Translates to: VSPTQAQAEPRP*RQGWNWLSWEV
Trigger: GACCTCCCAGCTCAGCCAGTTCCAACCCTGTCTGCAGGGACGGGGCTCAGCCTGTGCCTGGGTTGGGGACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543676.1
3UTR GCA 72 bp CCGTGGCTCCTCCAGGTTAGTGGTGCACACAGCGCTTaGCACACCGCCCACTGCCTCACTCCGTGCTGTGCC +
Preference number: 3 (lower is better)
Translates to: PWLLQVSGAHSA*HTAHCLTPCCA
Trigger: GGCACAGCACGGAGTGAGGCAGTGGGCGGTGTGGCAAGCGCTGTGTGCACCACTAACCTGGAGGAGCCACGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR GCA 72 bp TTGCTACCGCGGTCGTCCATCCCGTGCTCTTGTCTGTaGCGGCAGCTGGCAGGAGATGCTGCGGCCGTCGTG +
Preference number: 3 (lower is better)
Translates to: LLPRSSIPCSCL*RQLAGDAAAVV
Trigger: CACGACGGCCGCAGCATCTCCTGCCAGCTGCCGGCACAGACAAGAGCACGGGATGGACGACCGCGGTAGCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR CCA 72 bp GCTGGGACGCTGCTCTGTGGCCTCAGACAAGCTTGGTaGGCGACATGCTCAAGTGAGCAGGGGCCCCAGGCC +
Preference number: 3 (lower is better)
Translates to: AGTLLCGLRQAW*ATCSSEQGPQA
Trigger: GGCCTGGGGCCCCTGCTCACTTGAGCATGTCGCCCACCAAGCTTGTCTGAGGCCACAGAGCAGCGTCCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR CCA 72 bp CAGGCACAGGCTGAGCCCCGTCCCTGCAGACAGGGTTaGAACTGGCTGAGCTGGGAGGTCCTCGAGTTGGGG +
Preference number: 3 (lower is better)
Translates to: QAQAEPRPCRQG*NWLSWEVLELG
Trigger: CCCCAACTCGAGGACCTCCCAGCTCAGCCAGTTCCAACCCTGTCTGCAGGGACGGGGCTCAGCCTGTGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543676.1
3UTR CCA 72 bp ACTTTGCTGGCAGCAGCAGGCGCGGTGCCACGGCTTTaGGGACCAGCTGGTCACCAGGAGTCCTGCCATCCC +
Preference number: 3 (lower is better)
Translates to: TLLAAAGAVPRL*GPAGHQESCHP
Trigger: GGGATGGCAGGACTCCTGGTGACCAGCTGGTCCCCAAAGCCGTGGCACCGCGCCTGCTGCTGCCAGCAAAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR CCA 72 bp GAGGCCGGCAGCTTTGACACGAGGGTCCGGGAGCCGTaGCTCCTCCAGGTTAGTGGTGCACACAGCGCTTGC +
Preference number: 3 (lower is better)
Translates to: EAGSFDTRVREP*LLQVSGAHSAC
Trigger: GCAAGCGCTGTGTGCACCACTAACCTGGAGGAGCCACGGCTCCCGGACCCTCGTGTCAAAGCTGCCGGCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR-3UTR CAA 90 bp ATGGGGCTGGCCTCCTGCCCGGCACACTCGTTTCTGGCCACTCTTTCAGACGTGAAGGGAGGCCAGGTCTaGGACGGGCCCCCGTGGTTC +
Preference number: 3 (lower is better)
Translates to: MGLASCPAHSFLATLSDVKGGQV*DGPPWF
Trigger: GAACCACGGGGGCCCGTCCAAGACCTGGCCTCCCTT...CACGTCTGAAAGAGTGGCCAGAAACGAGTGTGCCGGGCAGGAGGCCAGCCCCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CAA 90 bp GGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCGCGTGGGACAGGGGCTaGTTTCCTCCAGTGGAGTCT +
Preference number: 3 (lower is better)
Translates to: GLGRAPVVLGVKGTSAAPAWDRG*FPPVES
Trigger: AGACTCCACTGGAGGAAACAAGCCCCTGTCCCACGC...GGGAGCAGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR TCA 72 bp TGGCCTCAGACAAGCTTGGTGGGCGACATGCTCAAGTaGGCAGGGGCCCCAGGCCACGTCCAACTGTCCGCG +
Preference number: 3 (lower is better)
Translates to: WPQTSLVGDMLK*AGAPGHVQLSA
Trigger: CGCGGACAGTTGGACGTGGCCTGGGGCCCCTGCTCACTTGAGCATGTCGCCCACCAAGCTTGTCTGAGGCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR TCA 72 bp CAGAGCAGGTGCTCAGAGGCAGGAGTGTCAGCTGACTaGCACCTGGAGAGGGCTGCACAGCCACGGGGCGTC +
Preference number: 3 (lower is better)
Translates to: QSRCSEAGVSAD*HLERAAQPRGV
Trigger: GACGCCCCGTGGCTGTGCAGCCCTCTCCAGGTGTCAGTCAGCTGACACTCCTGCCTCTGAGCACCTGCTCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543676.1
3UTR TCA 72 bp CTGTTGGGTGGGAACGTGGGGCCAGCTTGGCACTCCTaGGCTGCCTCAGGCCTGGCCTGTCTAGGCCTCAGT +
Preference number: 3 (lower is better)
Translates to: LLGGNVGPAWHS*AASGLACLGLS
Trigger: ACTGAGGCCTAGACAGGCCAGGCCTGAGGCAGCTCAGGAGTGCCAAGCTGGCCCCACGTTCCCACCCAACAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR GCA 72 bp CTGTGTGTGGGACTTTGCTGGCAGCAGCAGGCGCGGTaGCACGGCTTTGGGGACCAGCTGGTCACCAGGAGT +
Preference number: 3 (lower is better)
Translates to: LCVGLCWQQQAR*HGFGDQLVTRS
Trigger: ACTCCTGGTGACCAGCTGGTCCCCAAAGCCGTGGCACCGCGCCTGCTGCTGCCAGCAAAGTCCCACACACAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR GCA 72 bp GTTAGTGGTGCACACAGCGCTTGCCACACCGCCCACTaGCTCACTCCGTGCTGTGCCTGGTGCTGCGTGGGT +
Preference number: 3 (lower is better)
Translates to: VSGAHSACHTAH*LTPCCAWCCVG
Trigger: ACCCACGCAGCACCAGGCACAGCACGGAGTGAGGCAGTGGGCGGTGTGGCAAGCGCTGTGTGCACCACTAAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR CCA 72 bp AGGGCTGGGACGCTGCTCTGTGGCCTCAGACAAGCTTaGTGGGCGACATGCTCAAGTGAGCAGGGGCCCCAG +
Preference number: 3 (lower is better)
Translates to: RAGTLLCGLRQA*WATCSSEQGPQ
Trigger: CTGGGGCCCCTGCTCACTTGAGCATGTCGCCCACCAAGCTTGTCTGAGGCCACAGAGCAGCGTCCCAGCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR CCA 72 bp GGTGCTCAGAGGCAGGAGTGTCAGCTGACTGACACCTaGAGAGGGCTGCACAGCCACGGGGCGTCTCACTCC +
Preference number: 3 (lower is better)
Translates to: GAQRQECQLTDT*RGLHSHGASHS
Trigger: GGAGTGAGACGCCCCGTGGCTGTGCAGCCCTCTCCAGGTGTCAGTCAGCTGACACTCCTGCCTCTGAGCACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543676.1
3UTR CCA 72 bp GGTCGTCCATCCCGTGCTCTTGTCTGTGCCGGCAGCTaGCAGGAGATGCTGCGGCCGTCGTGCGTGATGGAT +
Preference number: 3 (lower is better)
Translates to: GRPSRALVCAGS*QEMLRPSCVMD
Trigger: ATCCATCACGCACGACGGCCGCAGCATCTCCTGCCAGCTGCCGGCACAGACAAGAGCACGGGATGGACGACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR-3UTR CAA 90 bp GGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGGCGTGGGACAGGGGCTaGTTTCCTCCAGTGGAGTCT +
Preference number: 3 (lower is better)
Translates to: GSRCEGDVCCSPPDPQSQAWDRG*FPPVES
Trigger: AGACTCCACTGGAGGAAACAAGCCCCTGTCCCACGC...CTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACACCGAGAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR TCA 72 bp TCCCCACCAGACCCGCAGTCCCAGTCTGCCGGGTCATaGGGGGTGGAAGTGCCTGATGAGCGCCTTCTTGTC +
Preference number: 3 (lower is better)
Translates to: SPPDPQSQSAGS*GVEVPDERLLV
Trigger: GACAAGAAGGCGCTCATCAGGCACTTCCACCCCTCATGACCCGGCAGACTGGGACTGCGGGTCTGGTGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542688.5
3UTR GCA 72 bp CTGCTCTGTGGCCTCAGACAAGCTTGGTGGGCGACATaGTCAAGTGAGCAGGGGCCCCAGGCCACGTCCAAC +
Preference number: 3 (lower is better)
Translates to: LLCGLRQAWWAT*SSEQGPQATSN
Trigger: GTTGGACGTGGCCTGGGGCCCCTGCTCACTTGAGCATGTCGCCCACCAAGCTTGTCTGAGGCCACAGAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR GCA 72 bp CTTCCTCTGACTGTTCCCGGGGTCAGGCCATGGGGATaGACAAGGCCACACCGTGAGGCAGGAGTTCGGGTG +
Preference number: 3 (lower is better)
Translates to: LPLTVPGVRPWG*TRPHREAGVRV
Trigger: CACCCGAACTCCTGCCTCACGGTGTGGCCTTGTGCATCCCCATGGCCTGACCCCGGGAACAGTCAGAGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR GCA 72 bp ATGAGCCCCACGTTGCTACCGCGGTCGTCCATCCCGTaGTCTTGTCTGTGCCGGCAGCTGGCAGGAGATGCT +
Preference number: 3 (lower is better)
Translates to: MSPTLLPRSSIP*SCLCRQLAGDA
Trigger: AGCATCTCCTGCCAGCTGCCGGCACAGACAAGAGCACGGGATGGACGACCGCGGTAGCAACGTGGGGCTCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR CCA 72 bp ACGGTGATGGGAGAGAGGGTTCACCGGCTGAGGGGCTaGTGTGGAGATGACCTGGAAAGTCCCTGCGCTGGG +
Preference number: 3 (lower is better)
Translates to: TVMGERVHRLRG*CGDDLESPCAG
Trigger: CCCAGCGCAGGGACTTTCCAGGTCATCTCCACACCAGCCCCTCAGCCGGTGAACCCTCTCTCCCATCACCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR CCA 72 bp GGACCCCTTCCTCTGACTGTTCCCGGGGTCAGGCCATaGGGATGCACAAGGCCACACCGTGAGGCAGGAGTT +
Preference number: 3 (lower is better)
Translates to: GPLPLTVPGVRP*GCTRPHREAGV
Trigger: AACTCCTGCCTCACGGTGTGGCCTTGTGCATCCCCATGGCCTGACCCCGGGAACAGTCAGAGGAAGGGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CAA 90 bp ACATGCTCAAGTGAGCAGGGGCCCCAGGCCACGTCCAACTGTCCGCGAGGCATGGCGTGGGACAGGGGCTaGTTTCCTCCAGTGGAGTCT +
Preference number: 3 (lower is better)
Translates to: TCSSEQGPQATSNCPRGMAWDRG*FPPVES
Trigger: AGACTCCACTGGAGGAAACAAGCCCCTGTCCCACGC...CATGCCTCGCGGACAGTTGGACGTGGCCTGGGGCCCCTGCTCACTTGAGCATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CAA 90 bp GCAGCAGGCGCGGTGCCACGGCTTTGGGGACCAGCTGGTCACCAGGAGTCCTGCCAGGCTTTCTGTAGTTaGTGGTCAACGAGCTCCAGG +
Preference number: 3 (lower is better)
Translates to: AAGAVPRLWGPAGHQESCQAFCS*WSTSSR
Trigger: CCTGGAGCTCGTTGACCACAAACTACAGAAAGCCTG...GCAGGACTCCTGGTGACCAGCTGGTCCCCAAAGCCGTGGCACCGCGCCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR-3UTR CAA 90 bp TTTAATGGGGAGGGAGGAGAGGATGAGTTCCCTCCAGGACGGGCTTGTTCTCGGAAGGGAGGCCAGGTCTaGGACGGGCCCCCGTGGTTC +
Preference number: 3 (lower is better)
Translates to: FNGEGGEDEFPPGRACSRKGGQV*DGPPWF
Trigger: GAACCACGGGGGCCCGTCCAAGACCTGGCCTCCCTT...CCGAGAACAAGCCCGTCCTGGAGGGAACTCATCCTCTCCTCCCTCCCCATTAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CAA 90 bp AACGTCTGGACTGTAGTCTCTGACTGCCGTTCCCTTGGGTCCAGGCCTCTGGCGCCAGGGACGGTCTCCTaGAGCTGCAACAACTGGCCC +
Preference number: 3 (lower is better)
Translates to: NVWTVVSDCRSLGSRPLAPGTVS*SCNNWP
Trigger: GGGCCAGTTGTTGCAGCTCAAGGAGACCGTCCCTGG...CGCCAGAGGCCTGGACCCAAGGGAACGGCAGTCAGAGACTACAGTCCAGACGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CAA 90 bp AGCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTTGGAGTCTTTGTTTTTaGTGGGAAACCTCTGGGACC +
Preference number: 3 (lower is better)
Translates to: STWGQGLAAPRCTDEVGGWSLCF*WETSGT
Trigger: GGTCCCAGAGGTTTCCCACAAAAAACAAAGACTCCA...ACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000614302.5
ENST00000649953.1
3UTR GCA 72 bp GGCACCCACCAGTCCTGGAAAACAGGGCTGGGACGCTaGTCTGTGGCCTCAGACAAGCTTGGTGGGCGACAT +
Preference number: 3 (lower is better)
Translates to: GTHQSWKTGLGR*SVASDKLGGRH
Trigger: ATGTCGCCCACCAAGCTTGTCTGAGGCCACAGAGCAGCGTCCCAGCCCTGTTTTCCAGGACTGGTGGGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR GCA 72 bp CCACCCCCGCTCCGCCCCTTTCTCTGGCAACATTTCTaGCATTTCCGGCAGAGCAGGTGCTCAGAGGCAGGA +
Preference number: 3 (lower is better)
Translates to: PPPLRPFLWQHF*HFRQSRCSEAG
Trigger: TCCTGCCTCTGAGCACCTGCTCTGCCGGAAATGGCAGAAATGTTGCCAGAGAAAGGGGCGGAGCGGGGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543676.1
3UTR CCA 72 bp AGATGGGGCTGGCCTCCTGCCCGGCACACTCGTTTCTaGCCACTCTTTCAGACGTGCATTCCGGGGGCAGAA +
Preference number: 3 (lower is better)
Translates to: RWGWPPARHTRF*PLFQTCIPGAE
Trigger: TTCTGCCCCCGGAATGCACGTCTGAAAGAGTGGCCAGAAACGAGTGTGCCGGGCAGGAGGCCAGCCCCATCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR CCA 72 bp TGGACTGGGGCACCCACCAGTCCTGGAAAACAGGGCTaGGACGCTGCTCTGTGGCCTCAGACAAGCTTGGTG +
Preference number: 3 (lower is better)
Translates to: WTGAPTSPGKQG*DAALWPQTSLV
Trigger: CACCAAGCTTGTCTGAGGCCACAGAGCAGCGTCCCAGCCCTGTTTTCCAGGACTGGTGGGTGCCCCAGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CAA 90 bp GCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGCATCCCAAACAGTTCTaGATTCTACGTGACCTGATT +
Preference number: 3 (lower is better)
Translates to: ARGARGWLHRAAQMRSAVHPKQF*ILRDLI
Trigger: AATCAGGTCACGTAGAATCAAGAACTGTTTGGGATG...CACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CAA 90 bp TCTCTTGTGGCTGCTGTGGTCCACACCTGTCTGCACACGCCTCCTGTTACTGATAGGAGGCCGGCAGCTTaGACACGAGGGTCCGGGAGC +
Preference number: 3 (lower is better)
Translates to: SLVAAVVHTCLHTPPVTDRRPAA*TRGSGS
Trigger: GCTCCCGGACCCTCGTGTCAAAGCTGCCGGCCTCCT...ATCAGTAACAGGAGGCGTGTGCAGACAGGTGTGGACCACAGCAGCCACAAGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR TCA 72 bp GCAAGGCCTAGACACAAACGTCTGGACTGTAGTCTCTaGCTGCCGTTCCCTTGGGTCCAGGCCTCTGGCGGG +
Preference number: 3 (lower is better)
Translates to: ARPRHKRLDCSL*LPFPWVQASGG
Trigger: CCCGCCAGAGGCCTGGACCCAAGGGAACGGCAGTCAGAGACTACAGTCCAGACGTTTGTGTCTAGGCCTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR TCA 72 bp CCGGCAGCTGGCAGGAGATGCTGCGGCCGTCGTGCGTaGTGGATCATGAGGTGCAGTCACGGATGTTTATCC +
Preference number: 3 (lower is better)
Translates to: PAAGRRCCGRRA*WIMRCSHGCLS
Trigger: GGATAAACATCCGTGACTGCACCTCATGATCCATCACGCACGACGGCCGCAGCATCTCCTGCCAGCTGCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR-3UTR CAA 90 bp ACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCATCCCAAACAGTTCTaGATTCTACGTGACCTGATT +
Preference number: 3 (lower is better)
Translates to: TWGQGLAAPRCTDEVGGDHPKQF*ILRDLI
Trigger: AATCAGGTCACGTAGAATCAAGAACTGTTTGGGATG...GTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CAA 90 bp GCCAGGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCTGGAGTCTTTGTTTTTaGTGGGAAACCTCTGGGACC +
Preference number: 3 (lower is better)
Translates to: ARSWTGPRGSRCEGDVCCWSLCF*WETSGT
Trigger: GGTCCCAGAGGTTTCCCACAAAAAACAAAGACTCCA...GCAGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CAA 90 bp ACGAATGGAGGAGGCAGGAGCTGGGTCCATGGTCTCCCTGCCAGGGAAGCCGCACCCTGTGCATCTGAATaGGCCCCGCTAAGTAAATGC +
Preference number: 3 (lower is better)
Translates to: TNGGGRSWVHGLPAREAAPCASE*APLSKC
Trigger: GCATTTACTTAGCGGGGCCAATTCAGATGCACAGGG...TGCGGCTTCCCTGGCAGGGAGACCATGGACCCAGCTCCTGCCTCCTCCATTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR-3UTR CAA 90 bp TGCACACGCCTCCTGTTACTGATGGTTAACTCAGTGGCTGGCACACTCACCACCGAACGTGGGGCCAGCTaGGCACTCCTGAGCTGCCTC +
Preference number: 3 (lower is better)
Translates to: CTRLLLLMVNSVAGTLTTERGAS*ALLSCL
Trigger: GAGGCAGCTCAGGAGTGCCAAGCTGGCCCCACGTTC...GGTGGTGAGTGTGCCAGCCACTGAGTTAACCATCAGTAACAGGAGGCGTGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR TCA 72 bp GTTCTGGGTAAGTTCAGGCCAGACACTGCTGGGCGATaGCTGTTACTTCCCCCAGGCTGTGGGGAGGAGGCA +
Preference number: 3 (lower is better)
Translates to: VLGKFRPDTAGR*LLLPPGCGEEA
Trigger: TGCCTCCTCCCCACAGCCTGGGGGAAGTAACAGTCATCGCCCAGCAGTGTCTGGCCTGAACTTACCCAGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR TCA 72 bp GGCAGCACCCCTGTGTCTGGCTGGGGTCAGAACTGGTaGCTTTCCAGATTCAAGCCAGCCTCCCTAGGAGGT +
Preference number: 3 (lower is better)
Translates to: GSTPVSGWGQNW*LSRFKPASLGG
Trigger: ACCTCCTAGGGAGGCTGGCTTGAATCTGGAAAGTCACCAGTTCTGACCCCAGCCAGACACAGGGGTGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR CCA 72 bp TGTCCTTCTCGGAGGGTCACCACAGCAGTGACCCGCTaGCCCCATGTCATATCCGGAACTCCAATCACAGCC +
Preference number: 3 (lower is better)
Translates to: CPSRRVTTAVTR*PHVISGTPITA
Trigger: GGCTGTGATTGGAGTTCCGGATATGACATGGGGCCAGCGGGTCACTGCTGTGGTGACCCTCCGAGAAGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542688.5
3UTR CCA 72 bp TGCCTGATGAGCGCCTTCTTGTCAATCTTGCCCATCTaGTTCCGCGGGATCTCCTCCACCAGCACCAGCTCC +
Preference number: 3 (lower is better)
Translates to: CLMSAFLSILPI*FRGISSTSTSS
Trigger: GGAGCTGGTGCTGGTGGAGGAGATCCCGCGGAACCAGATGGGCAAGATTGACAAGAAGGCGCTCATCAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542688.5
3UTR CCA 72 bp CAGACCCGCAGTCCCAGTCTGCCGGGTCATGAGGGGTaGAAGTGCCTGATGAGCGCCTTCTTGTCAATCTTG +
Preference number: 3 (lower is better)
Translates to: QTRSPSLPGHEG*KCLMSAFLSIL
Trigger: CAAGATTGACAAGAAGGCGCTCATCAGGCACTTCCACCCCTCATGACCCGGCAGACTGGGACTGCGGGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542688.5
3UTR-3UTR CAA 90 bp AGGCCAGGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTTGGAGTCTTTGTTTTTaGTGGGAAACCTCTGGGACC +
Preference number: 3 (lower is better)
Translates to: RPGLGRAPVVLGVKGTSAWSLCF*WETSGT
Trigger: GGTCCCAGAGGTTTCCCACAAAAAACAAAGACTCCA...AGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACCTGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CAA 90 bp GGCCAGACACTGCTGGGCGATGACTGTTACTTCCCCCAGGCTGTGGGGAGGAGGTGGAGTCTTTGTTTTTaGTGGGAAACCTCTGGGACC +
Preference number: 3 (lower is better)
Translates to: GQTLLGDDCYFPQAVGRRWSLCF*WETSGT
Trigger: GGTCCCAGAGGTTTCCCACAAAAAACAAAGACTCCA...CCTCCTCCCCACAGCCTGGGGGAAGTAACAGTCATCGCCCAGCAGTGTCTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR TCA 72 bp GCAGGAGATGCTGCGGCCGTCGTGCGTGATGGATCATaGGGTGCAGTCACGGATGTTTATCCTCCAGTGACC +
Preference number: 3 (lower is better)
Translates to: AGDAAAVVRDGS*GAVTDVYPPVT
Trigger: GGTCACTGGAGGATAAACATCCGTGACTGCACCTCATGATCCATCACGCACGACGGCCGCAGCATCTCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR GCA 72 bp CGGGGCGTCTCACTCCTCCACACGCCACTCACGTTCTaGTCTCTGCTGGGGACATTTCTGACTAGATGGTGT +
Preference number: 3 (lower is better)
Translates to: RGVSLLHTPLTF*SLLGTFLTRWC
Trigger: ACACCATCTAGTCAGAAATGTCCCCAGCAGAGAGCAGAACGTGAGTGGCGTGTGGAGGAGTGAGACGCCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543676.1
3UTR GCA 72 bp CACCTTCTCACTGTGGCTGGCAACAAGCTGCTGTTCTaGACCAGGACCTCCTCTCAGGCTCCCAGCAAAGGA +
Preference number: 3 (lower is better)
Translates to: HLLTVAGNKLLF*TRTSSQAPSKG
Trigger: TCCTTTGCTGGGAGCCTGAGAGGAGGTCCTGGTGCAGAACAGCAGCTTGTTGCCAGCCACAGTGAGAAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR CCA 72 bp TGCACGAAGGCCGACCAGCCTGGCACAGGGACCAGCTaGAGAGTCACTCGTGACTTTAGAACACGGCATTCA +
Preference number: 3 (lower is better)
Translates to: CTKADQPGTGTS*RVTRDFRTRHS
Trigger: TGAATGCCGTGTTCTAAAGTCACGAGTGACTCTCCAGCTGGTCCCTGTGCCAGGCTGGTCGGCCTTCGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR CCA 72 bp GCCAGGACATTTCTGGCCCACTCTTTGAGCTCCCTGTaGGACAGTGAGTGTCCTTCTCGGAGGGTCACCACA +
Preference number: 3 (lower is better)
Translates to: ARTFLAHSLSSL*DSECPSRRVTT
Trigger: TGTGGTGACCCTCCGAGAAGGACACTCACTGTCCCACAGGGAGCTCAAAGAGTGGGCCAGAAATGTCCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542688.5
3UTR CCA 72 bp AACATCTCCCATCGGGATGTTGGCCGGTTGGTGAGATaGGGCATCTCACACCTGCTGTGCACAGCCTCCTTG +
Preference number: 3 (lower is better)
Translates to: NISHRDVGRLVR*GISHLLCTASL
Trigger: CAAGGAGGCTGTGCACAGCAGGTGTGAGATGCCCCATCTCACCAACCGGCCAACATCCCGATGGGAGATGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR-3UTR CAA 90 bp CTGGAAAACAGGGCTGGGACGCTGCTCTGTGGCCTCAGACAAGCTTGGTGGGCGTGGAGTCTTTGTTTTTaGTGGGAAACCTCTGGGACC +
Preference number: 3 (lower is better)
Translates to: LENRAGTLLCGLRQAWWAWSLCF*WETSGT
Trigger: GGTCCCAGAGGTTTCCCACAAAAAACAAAGACTCCA...CGCCCACCAAGCTTGTCTGAGGCCACAGAGCAGCGTCCCAGCCCTGTTTTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR TCA 72 bp GCTGACCTTGTAGCCTCCAGTCTTGATGATGTCCACTaGGGTCCGGCCTCGGATCCAGTACTGGCCATCCTT +
Preference number: 3 (lower is better)
Translates to: ADLVASSLDDVH*GPASDPVLAIL
Trigger: AAGGATGGCCAGTACTGGATCCGAGGCCGGACCTCAGTGGACATCATCAAGACTGGAGGCTACAAGGTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542688.5
3UTR TCA 72 bp ATTTCTGGCCCACTCTTTGAGCTCCCTGTGGGACAGTaGGTGTCCTTCTCGGAGGGTCACCACAGCAGTGAC +
Preference number: 3 (lower is better)
Translates to: ISGPLFELPVGQ*VSFSEGHHSSD
Trigger: GTCACTGCTGTGGTGACCCTCCGAGAAGGACACTCACTGTCCCACAGGGAGCTCAAAGAGTGGGCCAGAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542688.5
3UTR GCA 72 bp CTTTCTGTGACACATGCTGATGGACACACAGTAGTGTaGAGGGTGGCAGGTGTCCCCACAGTGGGAGCTGCT +
Preference number: 3 (lower is better)
Translates to: LSVTHADGHTVV*RVAGVPTVGAA
Trigger: AGCAGCTCCCACTGTGGGGACACCTGCCACCCTGCACACTACTGTGTGTCCATCAGCATGTGTCACAGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR CCA 72 bp GACGGTCTCCTTGAGCTGCAACAACTGGCCCGAGGCTaGGGACCCCACATGGTGATTTCATCCCAAACAGTT +
Preference number: 3 (lower is better)
Translates to: DGLLELQQLARG*GPHMVISSQTV
Trigger: AACTGTTTGGGATGAAATCACCATGTGGGGTCCCCAGCCTCGGGCCAGTTGTTGCAGCTCAAGGAGACCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
3UTR CCA 72 bp CGGCATTCAACCGCATGTCCTTGGAGCACCGTATTCTaGTCAACCGGCTGGTCAACGAGCTCCAGGCTTTCT +
Preference number: 3 (lower is better)
Translates to: RHSTACPWSTVF*STGWSTSSRLS
Trigger: AGAAAGCCTGGAGCTCGTTGACCAGCCGGTTGACCAGAATACGGTGCTCCAAGGACATGCGGTTGAATGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR CCA 72 bp TGTCTCCAGAGGCCAGGTCAGCACCAGAGGCCAAGATaGGGAATAAACTGGGCTTTAATGGGGAGGGAGGAG +
Preference number: 3 (lower is better)
Translates to: CLQRPGQHQRPR*GINWALMGREE
Trigger: CTCCTCCCTCCCCATTAAAGCCCAGTTTATTCCCCATCTTGGCCTCTGGTGCTGACCTGGCCTCTGGAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR-3UTR CAA 90 bp CTCCTTGGAAGGCATCAGGCAAAATCAAGTAAGTGGAAGACATCTGGGCCTACGCCAGGGACGGTCTCCTaGAGCTGCAACAACTGGCCC +
Preference number: 3 (lower is better)
Translates to: LLGRHQAKSSKWKTSGPTPGTVS*SCNNWP
Trigger: GGGCCAGTTGTTGCAGCTCAAGGAGACCGTCCCTGG...CGTAGGCCCAGATGTCTTCCACTTACTTGATTTTGCCTGATGCCTTCCAAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR-3UTR CAA 90 bp TTTAATGGGGAGGGAGGAGAGGATGAGTTCCCTCCAGGACGGGCTTGTTCTCGGCCCTGTGCATCTGAATaGGCCCCGCTAAGTAAATGC +
Preference number: 3 (lower is better)
Translates to: FNGEGGEDEFPPGRACSRPCASE*APLSKC
Trigger: GCATTTACTTAGCGGGGCCAATTCAGATGCACAGGG...CCGAGAACAAGCCCGTCCTGGAGGGAACTCATCCTCTCCTCCCTCCCCATTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR TCA 72 bp TGTGGTCCACACCTGTCTGCACACGCCTCCTGTTACTaGTGGTTAACTCAGTGGCTGGCACACTCACCACCT +
Preference number: 3 (lower is better)
Translates to: CGPHLSAHASCY*WLTQWLAHSPP
Trigger: AGGTGGTGAGTGTGCCAGCCACTGAGTTAACCATCAGTAACAGGAGGCGTGTGCAGACAGGTGTGGACCACA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR CCA 72 bp ACTCTTTCAGACGTGCATTCCGGGGGCAGAATGTTCTaGGTAAGTTCAGGCCAGACACTGCTGGGCGATGAC +
Preference number: 3 (lower is better)
Translates to: TLSDVHSGGRMF*VSSGQTLLGDD
Trigger: GTCATCGCCCAGCAGTGTCTGGCCTGAACTTACCCAGAACATTCTGCCCCCGGAATGCACGTCTGAAAGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CAA 90 bp ATAAACTGGGCTTTAATGGGGAGGGAGGAGAGGATGAGTTCCCTCCAGGACGGGCCCTGTGCATCTGAATaGGCCCCGCTAAGTAAATGC +
Preference number: 3 (lower is better)
Translates to: INWALMGREERMSSLQDGPCASE*APLSKC
Trigger: GCATTTACTTAGCGGGGCCAATTCAGATGCACAGGG...CCCGTCCTGGAGGGAACTCATCCTCTCCTCCCTCCCCATTAAAGCCCAGTTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR TCA 72 bp GATCATGAGGTGCAGTCACGGATGTTTATCCTCCAGTaGCCTCGTCTCTCTTGTGGCTGCTGTGGTCCACAC +
Preference number: 3 (lower is better)
Translates to: DHEVQSRMFILQ*PRLSCGCCGPH
Trigger: GTGTGGACCACAGCAGCCACAAGAGAGACGAGGTCACTGGAGGATAAACATCCGTGACTGCACCTCATGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR GCA 72 bp GGCCCCTGTGCATCTGAATTGGCCCCGCTAAGTAAATaGAACGTGGGTGCACCCAACATTCACAACACACCT +
Preference number: 3 (lower is better)
Translates to: GPCASELAPLSK*NVGAPNIHNTP
Trigger: AGGTGTGTTGTGAATGTTGGGTGCACCCACGTTGCATTTACTTAGCGGGGCCAATTCAGATGCACAGGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR GCA 72 bp TCGTCTCTCTTGTGGCTGCTGTGGTCCACACCTGTCTaGACACGCCTCCTGTTACTGATGGTTAACTCAGTG +
Preference number: 3 (lower is better)
Translates to: SSLLWLLWSTPV*TRLLLLMVNSV
Trigger: CACTGAGTTAACCATCAGTAACAGGAGGCGTGTGCAGACAGGTGTGGACCACAGCAGCCACAAGAGAGACGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR CCA 72 bp TTCCTTAGCTACCAGCAAGGCCTAGACACAAACGTCTaGACTGTAGTCTCTGACTGCCGTTCCCTTGGGTCC +
Preference number: 3 (lower is better)
Translates to: FLSYQQGLDTNV*TVVSDCRSLGS
Trigger: GGACCCAAGGGAACGGCAGTCAGAGACTACAGTCCAGACGTTTGTGTCTAGGCCTTGCTGGTAGCTAAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR CCA 72 bp GCATGTCCTTGGAGCACCGTATTCTGGTCAACCGGCTaGTCAACGAGCTCCAGGCTTTCTGTAGTTTGTGGT +
Preference number: 3 (lower is better)
Translates to: ACPWSTVFWSTG*STSSRLSVVCG
Trigger: ACCACAAACTACAGAAAGCCTGGAGCTCGTTGACCAGCCGGTTGACCAGAATACGGTGCTCCAAGGACATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR CCA 72 bp CGTGACTTTAGAACACGGCATTCAACCGCATGTCCTTaGAGCACCGTATTCTGGTCAACCGGCTGGTCAACG +
Preference number: 3 (lower is better)
Translates to: RDFRTRHSTACP*STVFWSTGWST
Trigger: CGTTGACCAGCCGGTTGACCAGAATACGGTGCTCCAAGGACATGCGGTTGAATGCCGTGTTCTAAAGTCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
3UTR-3UTR CAA 90 bp AGGCCAAGATGGGGAATAAACTGGGCTTTAATGGGGAGGGAGGAGAGGATGAGTTTCAACCGCATGTCCTaGGAGCACCGTATTCTGGTC +
Preference number: 3 (lower is better)
Translates to: RPRWGINWALMGREERMSFNRMS*EHRILV
Trigger: GACCAGAATACGGTGCTCCAAGGACATGCGGTTGAA...ACTCATCCTCTCCTCCCTCCCCATTAAAGCCCAGTTTATTCCCCATCTTGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR GCA 72 bp GGAAGACATCTGGGCCTACGATCCAGTGATTCCACCTaGAGGAATATCTTCTGGAGAAATTCTTCCACTGTG +
Preference number: 3 (lower is better)
Translates to: GRHLGLRSSDST*RNIFWRNSSTV
Trigger: CACAGTGGAAGAATTTCTCCAGAAGATATTCCTGCAGGTGGAATCACTGGATCGTAGGCCCAGATGTCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR CCA 72 bp CCAGCCATCCAGGGTGAATGCACTCTTAGTTTCTTCTaGTTTATTCCAGTATTCTCGAAACACGGAGGGTCC +
Preference number: 3 (lower is better)
Translates to: PAIQGECTLSFF*FIPVFSKHGGS
Trigger: GGACCCTCCGTGTTTCGAGAATACTGGAATAAACCAGAAGAAACTAAGAGTGCATTCACCCTGGATGGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542688.5
3UTR GCA 72 bp GGTGTCCCCTGTCTTAAACCAGCCATCCAGGGTGAATaGACTCTTAGTTTCTTCTGGTTTATTCCAGTATTC +
Preference number: 3 (lower is better)
Translates to: GVPCLKPAIQGE*TLSFFWFIPVF
Trigger: GAATACTGGAATAAACCAGAAGAAACTAAGAGTGCATTCACCCTGGATGGCTGGTTTAAGACAGGGGACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542688.5
3UTR CCA 72 bp AAAGAACTGGAACAGGTGACTTGCAGGAAAATCAAATaGCCCAGAAACATATTCGAGATGTTCCACCTGACT +
Preference number: 3 (lower is better)
Translates to: KELEQVTCRKIK*PRNIFEMFHLT
Trigger: AGTCAGGTGGAACATCTCGAATATGTTTCTGGGCCATTTGATTTTCCTGCAAGTCACCTGTTCCAGTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR TCA 72 bp TCAAATGGCCCAGAAACATATTCGAGATGTTCCACCTaGCTTGTAATCAGGGAAATGCAAGCTAAAATAAGA +
Preference number: 3 (lower is better)
Translates to: SNGPETYSRCST*LVIREMQAKIR
Trigger: TCTTATTTTAGCTTGCATTTCCCTGATTACAAGTCAGGTGGAACATCTCGAATATGTTTCTGGGCCATTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR TCA 90 bp GCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGAGGCCAGGGCACGGGTaGACACCGGGGCGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: ARGARGWLHRAAQMRSAVRPGHG*TPGRSC
Trigger: ACAGGAGCGCCCCGGTGTTCACCCGTGCCCTGGCCT...CACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp AGCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTAGGCCAGGGCACGGGTaGACACCGGGGCGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: STWGQGLAAPRCTDEVGGRPGHG*TPGRSC
Trigger: ACAGGAGCGCCCCGGTGTTCACCCGTGCCCTGGCCT...ACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp GCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGGGGTGGGCCAGCAGGTaGCACTCCACCTCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: ARGWLHRAAQMRSAVTRQGWASR*HSTSRA
Trigger: CGCCCTGGAGGTGGAGTGGCACCTGCTGGCCCACCC...CTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp GCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGGGAGAGCCTGGCAACTaGAGGGCACTGTGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: ARGARGWLHRAAQMRSAVGEPGN*RALWGG
Trigger: CCCGCCCCACAGTGCCCTGCAGTTGCCAGGCTCTCC...CACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGCATCGGCCACGCCTGTaGGCTCCGGAGCTGGGTCTG +
Preference number: 4 (lower is better)
Translates to: ARGARGWLHRAAQMRSAVHRPRL*APELGL
Trigger: CAGACCCAGCTCCGGAGCCCACAGGCGTGGCCGATG...CACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp GCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGTGTAGATGGCTGGTGTaGGCGGCAGCAGCGGGACCC +
Preference number: 4 (lower is better)
Translates to: ARGARGWLHRAAQMRSAVCRWLV*AAAAGP
Trigger: GGGTCCCGCTGCTGCCGCTCACACCAGCCATCTACA...CACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp ACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCGGGACCCCTTCCTCTaGCTGTTCCCGGGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: TWGQGLAAPRCTDEVGGDRDPFL*LFPGSG
Trigger: GCCTGACCCCGGGAACAGTCAGAGGAAGGGGTCCCG...GTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp AGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGCTGTGGGGCGGGAGGTaGCTCAGCACGTGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: RGWLHRAAQMRSAVTRQRLWGGR*LSTWGQ
Trigger: CTGGCCCCACGTGCTGAGGCACCTCCCGCCCCACAG...CCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp AGCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTCCTCCATCCCTGCTCTaGGACCGGGACCTCTGCCGG +
Preference number: 4 (lower is better)
Translates to: STWGQGLAAPRCTDEVGGPPSLL*DRDLCR
Trigger: CCGGCAGAGGTCCCGGTCCCAGAGCAGGGATGGAGG...ACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGTGGGCCGGGAGACACTaGCTCTGGGTGAGGCACAGG +
Preference number: 4 (lower is better)
Translates to: ARGARGWLHRAAQMRSAVWAGRH*LWVRHR
Trigger: CCTGTGCCTCACCCAGAGCCAGTGTCTCCCGGCCCA...CACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GACTGCCGTTCCCTTGGGTCCAGGCCTCTGGCGGGAGGGCGGGACCCCTTCCTCGGAGGGCCCCCTGGGTaGCTGCCCAGACCTCCTATG +
Preference number: 4 (lower is better)
Translates to: DCRSLGSRPLAGGRDPFLGGPPG*LPRPPM
Trigger: CATAGGAGGTCTGGGCAGCCACCCAGGGGGCCCTCC...GAGGAAGGGGTCCCGCCCTCCCGCCAGAGGCCTGGACCCAAGGGAACGGCAGTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp GGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGGGACCCCCAGCTTCCTaGCCACCGGGCTCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: GLAAPRCTDEVGGDQAEVGPPAS*PPGSGA
Trigger: AGCTCCTGAGCCCGGTGGTCAGGAAGCTGGGGGTCC...CACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp GTCTCTGACTGCCGTTCCCTTGGGTCCAGGCCTCTGGCGGGAGGGCGGGACCCCCACAAGGCCACACCGTaGGGCAGGAGTTCGGGTGGG +
Preference number: 4 (lower is better)
Translates to: VSDCRSLGSRPLAGGRDPHKATP*GRSSGG
Trigger: CCCACCCGAACTCCTGCCTCACGGTGTGGCCTTGTG...GGGGTCCCGCCCTCCCGCCAGAGGCCTGGACCCAAGGGAACGGCAGTCAGAGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp AGCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTCACAAGGCCACACCGTaGGGCAGGAGTTCGGGTGGG +
Preference number: 4 (lower is better)
Translates to: STWGQGLAAPRCTDEVGGHKATP*GRSSGG
Trigger: CCCACCCGAACTCCTGCCTCACGGTGTGGCCTTGTG...ACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp GCCAGGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCGGGTGGGCCAGCAGGTaGCACTCCACCTCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: ARSWTGPRGSRCEGDVCCGWASR*HSTSRA
Trigger: CGCCCTGGAGGTGGAGTGGCACCTGCTGGCCCACCC...GCAGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACCTGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp AGCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTCCCGCAGTCCCAGTCTaGCGGGTCATGAGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: STWGQGLAAPRCTDEVGGPAVPV*RVMRGG
Trigger: TCCACCCCTCATGACCCGGCAGACTGGGACTGCGGG...ACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp ACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCCCGCAGTCCCAGTCTaGCGGGTCATGAGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: TWGQGLAAPRCTDEVGGDPAVPV*RVMRGG
Trigger: TCCACCCCTCATGACCCGGCAGACTGGGACTGCGGG...GTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp AGCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTCTGGCTGCACCGCGCTaGACAGATGAGGTCGGCGGT +
Preference number: 4 (lower is better)
Translates to: STWGQGLAAPRCTDEVGGLAAPR*TDEVGG
Trigger: ACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAG...ACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp GTCTCTGACTGCCGTTCCCTTGGGTCCAGGCCTCTGGCGGGAGGGCGGGACCCCCTGGCTGCACCGCGCTaGACAGATGAGGTCGGCGGT +
Preference number: 4 (lower is better)
Translates to: VSDCRSLGSRPLAGGRDPLAAPR*TDEVGG
Trigger: ACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAG...GGGGTCCCGCCCTCCCGCCAGAGGCCTGGACCCAAGGGAACGGCAGTCAGAGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp GCCAGGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCCTGTGGGGCGGGAGGTaGCTCAGCACGTGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: ARSWTGPRGSRCEGDVCCLWGGR*LSTWGQ
Trigger: CTGGCCCCACGTGCTGAGGCACCTCCCGCCCCACAG...GCAGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACCTGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GCCAGGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCCACCAGGCCTGGCGCTaGAACCCGGAAGGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: ARSWTGPRGSRCEGDVCCHQAWR*NPEGRW
Trigger: CCACCGGCCTTCCGGGTTCCAGCGCCAGGCCTGGTG...GCAGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACCTGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317447.9
ENST00000614302.5
CDS-3UTR CCA 90 bp TGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGTCTGCCGGGGGCAGGCACCAGGCCTaGCGCTGGAACCCGGAAGGC +
Preference number: 4 (lower is better)
Translates to: CEGDVCCSPPDPQSQSAGGRHQA*RWNPEG
Trigger: GCCTTCCGGGTTCCAGCGCCAGGCCTGGTGCCTGCC...CCCGGCAGACTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317447.9
ENST00000614302.5
CDS-3UTR CCA 90 bp GCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGGTCCGAGCGGGCCACTaGGGCTGTGTGCAGAAGACC +
Preference number: 4 (lower is better)
Translates to: ARGWLHRAAQMRSAVTRQVRAGH*GCVQKT
Trigger: GGTCTTCTGCACACAGCCCCAGTGGCCCGCTCGGAC...CTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGAGCCTGCAGATCTCCTaGGACAGGCGAAGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: ARGARGWLHRAAQMRSAVSLQIS*DRRRLR
Trigger: CCGCAGCCTTCGCCTGTCCCAGGAGATCTGCAGGCT...CACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp AGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGCCTCCATCCCTGCTCTaGGACCGGGACCTCTGCCGG +
Preference number: 4 (lower is better)
Translates to: RGWLHRAAQMRSAVTRQRPPSLL*DRDLCR
Trigger: CCGGCAGAGGTCCCGGTCCCAGAGCAGGGATGGAGG...CCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGTCTGTGATGCTGGGGTaGGCCAGCAGGTGCCACTCC +
Preference number: 4 (lower is better)
Translates to: ARGARGWLHRAAQMRSAVSVMLG*ASRCHS
Trigger: GGAGTGGCACCTGCTGGCCCACCCCAGCATCACAGA...CACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGGAGGCCAGGTCTTaGACGGGCCCCCGTGGTTCT +
Preference number: 4 (lower is better)
Translates to: ARGWLHRAAQMRSAVTRQREARS*TGPRGS
Trigger: AGAACCACGGGGGCCCGTCCAAGACCTGGCCTCCCT...CTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GACTGCCGTTCCCTTGGGTCCAGGCCTCTGGCGGGAGGGCGGGACCCCTTCCTCAGCCTGAGATGGGGCTaGCCTCCTGCCCGGCACACT +
Preference number: 4 (lower is better)
Translates to: DCRSLGSRPLAGGRDPFLSLRWG*PPARHT
Trigger: AGTGTGCCGGGCAGGAGGCCAGCCCCATCTCAGGCT...GAGGAAGGGGTCCCGCCCTCCCGCCAGAGGCCTGGACCCAAGGGAACGGCAGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GTCTCTGACTGCCGTTCCCTTGGGTCCAGGCCTCTGGCGGGAGGGCGGGACCCCAACCCGGAAGGCCGGTaGGACACCTACGAGACGGCC +
Preference number: 4 (lower is better)
Translates to: VSDCRSLGSRPLAGGRDPNPEGR*DTYETA
Trigger: GGCCGTCTCGTAGGTGTCCCACCGGCCTTCCGGGTT...GGGGTCCCGCCCTCCCGCCAGAGGCCTGGACCCAAGGGAACGGCAGTCAGAGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614302.5
CDS-3UTR CCA 90 bp GGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCGCAGGGTGTGTGGGGTaGGCGCTGCCAGCCACGTGG +
Preference number: 4 (lower is better)
Translates to: GLGRAPVVLGVKGTSAAPAGCVG*ALPATW
Trigger: CCACGTGGCTGGCAGCGCCCACCCCACACACCCTGC...GGGAGCAGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR TCA 90 bp GGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCGGGGCAGCATTGCACTaGCAGGCGGCCGAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: GLGRAPVVLGVKGTSAAPGAALH*QAAEPA
Trigger: AGCTGGCTCGGCCGCCTGTCAGTGCAATGCTGCCCC...GGGAGCAGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317447.9
ENST00000614302.5
CDS-3UTR TCA 90 bp AGCACCAGCTCCGAGGGCACCGCGTACGGGGCCAGGACATTTCTGGCCCACTCTAGGCCAGGGCACGGGTaGACACCGGGGCGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: STSSEGTAYGARTFLAHSRPGHG*TPGRSC
Trigger: ACAGGAGCGCCCCGGTGTTCACCCGTGCCCTGGCCT...AGAGTGGGCCAGAAATGTCCTGGCCCCGTACGCGGTGCCCTCGGAGCTGGTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542688.5
CDS-3UTR TCA 90 bp CCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGACACCAGGGACGGGACCCCCAGCTTCCTaGCCACCGGGCTCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: PRCTDEVGGDQAEVTPGTGPPAS*PPGSGA
Trigger: AGCTCCTGAGCCCGGTGGTCAGGAAGCTGGGGGTCC...CGTCCCTGGTGTCACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp GCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGGACAGAGCAGCGCGTTaGCCACACCATGGACGTGGT +
Preference number: 4 (lower is better)
Translates to: ARGARGWLHRAAQMRSAVDRAAR*PHHGRG
Trigger: ACCACGTCCATGGTGTGGTCAACGCGCTGCTCTGTC...CACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp AGCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTCCACCTCCAGGGCGCTaGCCTTGTAGCCTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: STWGQGLAAPRCTDEVGGPPPGR*PCSLQS
Trigger: AGACTGGAGGCTACAAGGTCAGCGCCCTGGAGGTGG...ACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp GCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGCAGTCTGCCGGGTCATaGGGGGTGGAAGTGCCTGAT +
Preference number: 4 (lower is better)
Translates to: ARGARGWLHRAAQMRSAVQSAGS*GVEVPD
Trigger: ATCAGGCACTTCCACCCCTCATGACCCGGCAGACTG...CACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp ACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCCGTGGTTCTCGGTGTaGAGGGGACGTCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: TWGQGLAAPRCTDEVGGDPWFSV*RGRLLL
Trigger: GAGCAGCAGACGTCCCCTTCACACCGAGAACCACGG...GTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp AGCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTCAGGGACGGTCTCCTTaGGCTGCAACAACTGGCCCG +
Preference number: 4 (lower is better)
Translates to: STWGQGLAAPRCTDEVGGQGRSP*AATTGP
Trigger: CGGGCCAGTTGTTGCAGCTCAAGGAGACCGTCCCTG...ACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp CCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTGGAGGCCGGCAGCTTTaGCACGAGGGTCCGGGAGCC +
Preference number: 4 (lower is better)
Translates to: PVVLGVKGTSAAPHQTRSGGRQL*HEGPGA
Trigger: GGCTCCCGGACCCTCGTGTCAAAGCTGCCGGCCTCC...ACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACACCGAGAACCACGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR GCA 90 bp AGCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTCACATGGGGCAGCATTaGACTGACAGGCGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: STWGQGLAAPRCTDEVGGHMGQH*TDRRPS
Trigger: GCTCGGCCGCCTGTCAGTGCAATGCTGCCCCATGTG...ACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
CDS-3UTR GCA 90 bp AGCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTTGGGACCGGGACCTCTaGCGGTTCCTCTACTGCTCC +
Preference number: 4 (lower is better)
Translates to: STWGQGLAAPRCTDEVGGWDRDL*RFLYCS
Trigger: GGAGCAGTAGAGGAACCGGCAGAGGTCCCGGTCCCA...ACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp GTCTCTGACTGCCGTTCCCTTGGGTCCAGGCCTCTGGCGGGAGGGCGGGACCCCTGGGACCGGGACCTCTaGCGGTTCCTCTACTGCTCC +
Preference number: 4 (lower is better)
Translates to: VSDCRSLGSRPLAGGRDPWDRDL*RFLYCS
Trigger: GGAGCAGTAGAGGAACCGGCAGAGGTCCCGGTCCCA...GGGGTCCCGCCCTCCCGCCAGAGGCCTGGACCCAAGGGAACGGCAGTCAGAGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp GGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGCCCGCAGTCCCAGTCTaGCGGGTCATGAGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: GLAAPRCTDEVGGDQAEVPAVPV*RVMRGG
Trigger: TCCACCCCTCATGACCCGGCAGACTGGGACTGCGGG...CACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp ACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACTGTGAAGGGGACGTCTaGTGCTCCCCACCAGACCCG +
Preference number: 4 (lower is better)
Translates to: TWGQGLAAPRCTDEVGGDCEGDV*CSPPDP
Trigger: CGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACA...GTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp AGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGCTGGCTGCACCGCGCTaGACAGATGAGGTCGGCGGT +
Preference number: 4 (lower is better)
Translates to: RGWLHRAAQMRSAVTRQRLAAPR*TDEVGG
Trigger: ACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAG...CCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp TGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGTCTGCCGGGGGAGAGCCTGGCAACTaGAGGGCACTGTGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: CEGDVCCSPPDPQSQSAGGEPGN*RALWGG
Trigger: CCCGCCCCACAGTGCCCTGCAGTTGCCAGGCTCTCC...CCCGGCAGACTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp GCCAGGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCGGAGAGCCTGGCAACTaGAGGGCACTGTGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: ARSWTGPRGSRCEGDVCCGEPGN*RALWGG
Trigger: CCCGCCCCACAGTGCCCTGCAGTTGCCAGGCTCTCC...GCAGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACCTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp CCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGACACCAGGGACGGGAGAGCCTGGCAACTaGAGGGCACTGTGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: PRCTDEVGGDQAEVTPGTGEPGN*RALWGG
Trigger: CCCGCCCCACAGTGCCCTGCAGTTGCCAGGCTCTCC...CGTCCCTGGTGTCACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp CCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGACACCAGGGACGGGCCCCCTGGGTGGCTaGCCAGACCTCCTATGTGGG +
Preference number: 4 (lower is better)
Translates to: PRCTDEVGGDQAEVTPGTGPLGG*PDLLCG
Trigger: CCCACATAGGAGGTCTGGGCAGCCACCCAGGGGGCC...CGTCCCTGGTGTCACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp GACTGCCGTTCCCTTGGGTCCAGGCCTCTGGCGGGAGGGCGGGACCCCTTCCTCGCTTGGTGGGCGACATaGTCAAGTGAGCAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: DCRSLGSRPLAGGRDPFLAWWAT*SSEQGP
Trigger: GGGCCCCTGCTCACTTGAGCATGTCGCCCACCAAGC...GAGGAAGGGGTCCCGCCCTCCCGCCAGAGGCCTGGACCCAAGGGAACGGCAGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp GCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGGCTTGGTGGGCGACATaGTCAAGTGAGCAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: ARGWLHRAAQMRSAVTRQAWWAT*SSEQGP
Trigger: GGGCCCCTGCTCACTTGAGCATGTCGCCCACCAAGC...CTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp CCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGACACCAGGGACGCAGCTGGTGGCAGCCTaGTCCCAGGGCACCTGCTCC +
Preference number: 4 (lower is better)
Translates to: PRCTDEVGGDQAEVTPGTQLVAA*SQGTCS
Trigger: GGAGCAGGTGCCCTGGGAGCAGGCTGCCACCAGCTG...CGTCCCTGGTGTCACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR CCA 90 bp AGGGCCGTGGACTGGGGCACCCACCAGTCCTGGAAAACAGGGCTGGGACGCTGCTGCTCAGCACGCCCTTaGGCCTCCCCGTGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: RAVDWGTHQSWKTGLGRCCSARP*ASPWSH
Trigger: GTGGGACCACGGGGAGGCCCAAGGGCGTGCTGAGCA...GCAGCGTCCCAGCCCTGTTTTCCAGGACTGGTGGGTGCCCCAGTCCACGGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp TGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGTCTGCCGGGTGCTCAGCACGCCCTTaGGCCTCCCCGTGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: CEGDVCCSPPDPQSQSAGCSARP*ASPWSH
Trigger: GTGGGACCACGGGGAGGCCCAAGGGCGTGCTGAGCA...CCCGGCAGACTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp AGGCCAGGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCAGGCGCACGGCAGTaGTCAGGGGCCCGGACAGAG +
Preference number: 4 (lower is better)
Translates to: RPGLGRAPVVLGVKGTSAAGARQ*SGARTE
Trigger: CTCTGTCCGGGCCCCTGACCACTGCCGTGCGCCTGC...AGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACCTGGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGGCAGGCGCACGGCAGTaGTCAGGGGCCCGGACAGAG +
Preference number: 4 (lower is better)
Translates to: GSRCEGDVCCSPPDPQSQAGARQ*SGARTE
Trigger: CTCTGTCCGGGCCCCTGACCACTGCCGTGCGCCTGC...CTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACACCGAGAACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp TGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGTCTGCCGGGGGTCCCCACGGAACCTaGCAGGCGCACGGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: CEGDVCCSPPDPQSQSAGGPHGT*QAHGSG
Trigger: ACCACTGCCGTGCGCCTGCCAGGTTCCGTGGGGACC...CCCGGCAGACTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000614302.5
CDS-3UTR CCA 90 bp GCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGCTGTACTCCAGGCAGTaGGGTCCCCACGGAACCTGG +
Preference number: 4 (lower is better)
Translates to: ARGWLHRAAQMRSAVTRQLYSRQ*GPHGTW
Trigger: CCAGGTTCCGTGGGGACCCCACTGCCTGGAGTACAG...CTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000614302.5
CDS-3UTR CCA 90 bp ACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACACCCTGGGGTCACCTTaGTCCCCCTCTCGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: TWGQGLAAPRCTDEVGGDTLGSP*SPSRLP
Trigger: AGGGAGACGAGAGGGGGACCAAGGTGACCCCAGGGT...GTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGAGGGAGGCCAGGTCTTaGACGGGCCCCCGTGGTTCT +
Preference number: 4 (lower is better)
Translates to: GLAAPRCTDEVGGDQAEVREARS*TGPRGS
Trigger: AGAACCACGGGGGCCCGTCCAAGACCTGGCCTCCCT...CACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp ACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCCCAGACCTCCTATGTaGGCCGGGAGACACTGGCTC +
Preference number: 4 (lower is better)
Translates to: TWGQGLAAPRCTDEVGGDPRPPM*AGRHWL
Trigger: GAGCCAGTGTCTCCCGGCCCACATAGGAGGTCTGGG...GTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp AGCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGGCACCCACCAGTCCTaGAAAACAGGGCTGGGACGC +
Preference number: 4 (lower is better)
Translates to: STWGQGLAAPRCTDEVGGGTHQS*KTGLGR
Trigger: GCGTCCCAGCCCTGTTTTCCAGGACTGGTGGGTGCC...ACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp CCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTGGTGGGGCAGGGCCGTaGACTGGGGCACCCACCAGT +
Preference number: 4 (lower is better)
Translates to: PVVLGVKGTSAAPHQTRSGGAGP*TGAPTS
Trigger: ACTGGTGGGTGCCCCAGTCCACGGCCCTGCCCCACC...ACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACACCGAGAACCACGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp AGGCCAGGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGGTGGGGCAGGGCCGTaGACTGGGGCACCCACCAGT +
Preference number: 4 (lower is better)
Translates to: RPGLGRAPVVLGVKGTSAGGAGP*TGAPTS
Trigger: ACTGGTGGGTGCCCCAGTCCACGGCCCTGCCCCACC...AGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACCTGGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp GCCAGGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCACCGCCACTCATCCATaGCGCCCACTGGGCCACGAC +
Preference number: 4 (lower is better)
Translates to: ARSWTGPRGSRCEGDVCCTATHP*RPLGHD
Trigger: GTCGTGGCCCAGTGGGCGTCATGGATGAGTGGCGGT...GCAGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACCTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp GCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGTCTGGGAGTCGCAGATaGCATACTCCAGCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: ARGWLHRAAQMRSAVTRQSGSRR*HTPAGP
Trigger: CGGCCCAGCTGGAGTATGTCATCTGCGACTCCCAGA...CTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp GTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGTCTGCCGGGTTGTAGATGGCTGGTGTaGGCGGCAGCAGCGGGACCC +
Preference number: 4 (lower is better)
Translates to: VKGTSAAPHQTRSPSLPGCRWLV*AAAAGP
Trigger: GGGTCCCGCTGCTGCCGCTCACACCAGCCATCTACA...ACCCGGCAGACTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542688.5
CDS-3UTR TCA 90 bp GGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGCCACCTCCAGGGCGCTaGCCTTGTAGCCTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: GLAAPRCTDEVGGDQAEVPPPGR*PCSLQS
Trigger: AGACTGGAGGCTACAAGGTCAGCGCCCTGGAGGTGG...CACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp AGCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTTCACAGCCACATCTGTaGTGCTGGGGTGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: STWGQGLAAPRCTDEVGGSQPHL*CWGGPA
Trigger: TGCTGGCCCACCCCAGCATCACAGATGTGGCTGTGA...ACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp GTCTCTGACTGCCGTTCCCTTGGGTCCAGGCCTCTGGCGGGAGGGCGGGACCCCTCACAGCCACATCTGTaGTGCTGGGGTGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: VSDCRSLGSRPLAGGRDPSQPHL*CWGGPA
Trigger: TGCTGGCCCACCCCAGCATCACAGATGTGGCTGTGA...GGGGTCCCGCCCTCCCGCCAGAGGCCTGGACCCAAGGGAACGGCAGTCAGAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp ACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGTCTGCCGGGTCATaGGGGGTGGAAGTGCCTGAT +
Preference number: 4 (lower is better)
Translates to: TWGQGLAAPRCTDEVGGDQSAGS*GVEVPD
Trigger: ATCAGGCACTTCCACCCCTCATGACCCGGCAGACTG...GTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp GGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGCCGTGGTTCTCGGTGTaGAGGGGACGTCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: GLAAPRCTDEVGGDQAEVPWFSV*RGRLLL
Trigger: GAGCAGCAGACGTCCCCTTCACACCGAGAACCACGG...CACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp GACTGCCGTTCCCTTGGGTCCAGGCCTCTGGCGGGAGGGCGGGACCCCTTCCTCGTTCTGGGAGGCTTGTaGACCCTCAGCTCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: DCRSLGSRPLAGGRDPFLVLGGL*TLSSSQ
Trigger: CTGGGAGGAGCTGAGGGTTCACAAGCCTCCCAGAAC...GAGGAAGGGGTCCCGCCCTCCCGCCAGAGGCCTGGACCCAAGGGAACGGCAGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp GCAGCAGGCGCGGTGCCACGGCTTTGGGGACCAGCTGGTCACCAGGAGTCCTGCAGAGGGTTCACCGGCTaGGGGGCTGGTGTGGAGATG +
Preference number: 4 (lower is better)
Translates to: AAGAVPRLWGPAGHQESCRGFTG*GAGVEM
Trigger: CATCTCCACACCAGCCCCTCAGCCGGTGAACCCTCT...GCAGGACTCCTGGTGACCAGCTGGTCCCCAAAGCCGTGGCACCGCGCCTGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR TCA 90 bp AGCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACACTGCTGGGCGATaGCTGTTACTTCCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: STWGQGLAAPRCTDEVGGDTAGR*LLLPPG
Trigger: GCCTGGGGGAAGTAACAGTCATCGCCCAGCAGTGTC...ACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp GCCAGGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCGGGGCAGCATTGCACTaGCAGGCGGCCGAGCTACGA +
Preference number: 4 (lower is better)
Translates to: ARSWTGPRGSRCEGDVCCGAALH*QAAELR
Trigger: TCGTAGCTCGGCCGCCTGTCAGTGCAATGCTGCCCC...GCAGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACCTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000406948.7
CDS-3UTR TCA 90 bp GTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGTCTGCCGGGTGCAAGGCACAGGACGTaGGTGCCCAACCAGCTCCCG +
Preference number: 4 (lower is better)
Translates to: VKGTSAAPHQTRSPSLPGARHRT*VPNQLP
Trigger: CGGGAGCTGGTTGGGCACTCACGTCCTGTGCCTTGC...ACCCGGCAGACTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542688.5
CDS-3UTR GCA 90 bp ACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACTACGTGTGGCGGCCGTaGTGGTCAACCAGGGCGATT +
Preference number: 4 (lower is better)
Translates to: TWGQGLAAPRCTDEVGGDYVWRP*WSTRAI
Trigger: AATCGCCCTGGTTGACCAGCACGGCCGCCACACGTA...GTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp GCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGGGGACAGGCGAAGGCTaGGGGAATAAAGCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: ARGARGWLHRAAQMRSAVGTGEG*GNKAPC
Trigger: ACAGGGAGCTTTATTCCCGCAGCCTTCGCCTGTCCC...CACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp GGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGCACACCCGCAGAGCCTaGAGATCTCCTGGGACAGGC +
Preference number: 4 (lower is better)
Translates to: GLAAPRCTDEVGGDQAEVHTRRA*RSPGTG
Trigger: GCCTGTCCCAGGAGATCTGCAGGCTCTGCGGGTGTG...CACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp AGCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTCCTGTAGAGGGGGACTaGCACACCGCCACTCATCCA +
Preference number: 4 (lower is better)
Translates to: STWGQGLAAPRCTDEVGGPVEGD*HTATHP
Trigger: TGGATGAGTGGCGGTGTGGCAGTCCCCCTCTACAGG...ACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp GTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGTCTGCCGGGTCCCGCAGTCCCAGTCTaGCGGGTCATGAGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: VKGTSAAPHQTRSPSLPGPAVPV*RVMRGG
Trigger: TCCACCCCTCATGACCCGGCAGACTGGGACTGCGGG...ACCCGGCAGACTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542688.5
CDS-3UTR GCA 90 bp TGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGTCTGCCGGGGAAGGGGACGTCTGCTaGTCCCCACCAGACCCGCAG +
Preference number: 4 (lower is better)
Translates to: CEGDVCCSPPDPQSQSAGEGDVC*SPPDPQ
Trigger: CTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTC...CCCGGCAGACTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp CCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTGGAGAGCCTGGCAACTaGAGGGCACTGTGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: PVVLGVKGTSAAPHQTRSGEPGN*RALWGG
Trigger: CCCGCCCCACAGTGCCCTGCAGTTGCCAGGCTCTCC...ACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACACCGAGAACCACGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp GCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGGAAACCTCTGGGACCTaGCCTGGAGAGCCTGGCAAC +
Preference number: 4 (lower is better)
Translates to: ARGWLHRAAQMRSAVTRQETSGT*PGEPGN
Trigger: GTTGCCAGGCTCTCCAGGGCAGGTCCCAGAGGTTTC...CTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp GGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGATGGGGCTGGCCTCCTaGCCGGCACACTCGTTTCTG +
Preference number: 4 (lower is better)
Translates to: GLAAPRCTDEVGGDQAEVMGLAS*PAHSFL
Trigger: CAGAAACGAGTGTGCCGGGCAGGAGGCCAGCCCCAT...CACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp GTCTCTGACTGCCGTTCCCTTGGGTCCAGGCCTCTGGCGGGAGGGCGGGACCCCACAGGGCTGGGACGCTaGTCTGTGGCCTCAGACAAG +
Preference number: 4 (lower is better)
Translates to: VSDCRSLGSRPLAGGRDPTGLGR*SVASDK
Trigger: CTTGTCTGAGGCCACAGAGCAGCGTCCCAGCCCTGT...GGGGTCCCGCCCTCCCGCCAGAGGCCTGGACCCAAGGGAACGGCAGTCAGAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp AGCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTACAGGGCTGGGACGCTaGTCTGTGGCCTCAGACAAG +
Preference number: 4 (lower is better)
Translates to: STWGQGLAAPRCTDEVGGTGLGR*SVASDK
Trigger: CTTGTCTGAGGCCACAGAGCAGCGTCCCAGCCCTGT...ACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCGTCCGAGCGGGCCACTaGGGCTGTGTGCAGAAGACC +
Preference number: 4 (lower is better)
Translates to: GLGRAPVVLGVKGTSAAPVRAGH*GCVQKT
Trigger: GGTCTTCTGCACACAGCCCCAGTGGCCCGCTCGGAC...GGGAGCAGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GCAGCAGGCGCGGTGCCACGGCTTTGGGGACCAGCTGGTCACCAGGAGTCCTGCAGCCTGCAGATCTCCTaGGACAGGCGAAGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: AAGAVPRLWGPAGHQESCSLQIS*DRRRLR
Trigger: CCGCAGCCTTCGCCTGTCCCAGGAGATCTGCAGGCT...GCAGGACTCCTGGTGACCAGCTGGTCCCCAAAGCCGTGGCACCGCGCCTGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR CCA 90 bp CCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTTGCTCAGCACGCCCTTaGGCCTCCCCGTGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: PVVLGVKGTSAAPHQTRSCSARP*ASPWSH
Trigger: GTGGGACCACGGGGAGGCCCAAGGGCGTGCTGAGCA...ACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACACCGAGAACCACGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp ACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACGTCCATGCCCACTTGTaGACCAGCCCGGTCACCACA +
Preference number: 4 (lower is better)
Translates to: TWGQGLAAPRCTDEVGGDVHAHL*TSPVTT
Trigger: TGTGGTGACCGGGCTGGTCCACAAGTGGGCATGGAC...GTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGGCGTTGACCACACCATaGACGTGGTGCAGCGGGAGC +
Preference number: 4 (lower is better)
Translates to: GLAAPRCTDEVGGDQAEVALTTP*TWCSGS
Trigger: GCTCCCGCTGCACCACGTCCATGGTGTGGTCAACGC...CACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp ACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCGCTCCAGCAGGGTGTaGCCCGTGATGTTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: TWGQGLAAPRCTDEVGGDRSSRV*PVMFFH
Trigger: GTGGAAGAACATCACGGGCCACACCCTGCTGGAGCG...GTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp CTGACTGACACCTGGAGAGGGCTGCACAGCCACGGGGCGTCTCACTCCTCCACAGCAGGCGCACGGCAGTaGTCAGGGGCCCGGACAGAG +
Preference number: 4 (lower is better)
Translates to: LTDTWRGLHSHGASHSSTAGARQ*SGARTE
Trigger: CTCTGTCCGGGCCCCTGACCACTGCCGTGCGCCTGC...TGTGGAGGAGTGAGACGCCCCGTGGCTGTGCAGCCCTCTCCAGGTGTCAGTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543676.1
CDS-3UTR CCA 90 bp GGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGGGTCCCCACGGAACCTaGCAGGCGCACGGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: GSRCEGDVCCSPPDPQSQGPHGT*QAHGSG
Trigger: ACCACTGCCGTGCGCCTGCCAGGTTCCGTGGGGACC...CTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACACCGAGAACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000614302.5
CDS-3UTR CCA 90 bp AGGCCAGGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGGTCCCCACGGAACCTaGCAGGCGCACGGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: RPGLGRAPVVLGVKGTSAGPHGT*QAHGSG
Trigger: ACCACTGCCGTGCGCCTGCCAGGTTCCGTGGGGACC...AGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACCTGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000614302.5
CDS-3UTR CCA 90 bp GCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGACACCAGGTCCCCACGGAACCTaGCAGGCGCACGGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: AAPRCTDEVGGDQAEVTPGPHGT*QAHGSG
Trigger: ACCACTGCCGTGCGCCTGCCAGGTTCCGTGGGGACC...TGGTGTCACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000614302.5
CDS-3UTR CCA 90 bp AGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGACCCTGGGGTCACCTTaGTCCCCCTCTCGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: RGWLHRAAQMRSAVTRQRTLGSP*SPSRLP
Trigger: AGGGAGACGAGAGGGGGACCAAGGTGACCCCAGGGT...CCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACAGCAGTGACCCGCTaGCCCCATGTCATATCCGGA +
Preference number: 4 (lower is better)
Translates to: ARGARGWLHRAAQMRSAVTAVTR*PHVISG
Trigger: TCCGGATATGACATGGGGCCAGCGGGTCACTGCTGT...CACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp ACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAACTGGCCCGAGGCTaGGGACCCCACATGGTGATT +
Preference number: 4 (lower is better)
Translates to: TWGQGLAAPRCTDEVGGDQLARG*GPHMVI
Trigger: AATCACCATGTGGGGTCCCCAGCCTCGGGCCAGTTG...GTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp AGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTTGAGCTGCAACAACTaGCCCGAGGCTGGGGACCCC +
Preference number: 4 (lower is better)
Translates to: RGWLHRAAQMRSAVTRQRLSCNN*PEAGDP
Trigger: GGGGTCCCCAGCCTCGGGCCAGTTGTTGCAGCTCAA...CCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GCCAGGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCAACTGCAGGGCACTGTaGGGCGGGAGGTGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: ARSWTGPRGSRCEGDVCCNCRAL*GGRCLS
Trigger: GCTGAGGCACCTCCCGCCCCACAGTGCCCTGCAGTT...GCAGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACCTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp AGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGCTGCCCTGGAGAGCCTaGCAACTGCAGGGCACTGTG +
Preference number: 4 (lower is better)
Translates to: RGWLHRAAQMRSAVTRQRLPWRA*QLQGTV
Trigger: CACAGTGCCCTGCAGTTGCCAGGCTCTCCAGGGCAG...CCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GACTGCCGTTCCCTTGGGTCCAGGCCTCTGGCGGGAGGGCGGGACCCCTTCCTCCACGTGCAGACGGCGTaGGACAGGGGCTTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: DCRSLGSRPLAGGRDPFLHVQTA*DRGLFP
Trigger: AGGAAACAAGCCCCTGTCCCACGCCGTCTGCACGTG...GAGGAAGGGGTCCCGCCCTCCCGCCAGAGGCCTGGACCCAAGGGAACGGCAGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCTGGGCCGGGAGACACTaGCTCTGGGTGAGGCACAGG +
Preference number: 4 (lower is better)
Translates to: GLGRAPVVLGVKGTSAAPWAGRH*LWVRHR
Trigger: CCTGTGCCTCACCCAGAGCCAGTGTCTCCCGGCCCA...GGGAGCAGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GACTGCCGTTCCCTTGGGTCCAGGCCTCTGGCGGGAGGGCGGGACCCCTTCCTCTGTGGGCTCCGGAGCTaGGTCTGGGGAAAAGCTGGT +
Preference number: 4 (lower is better)
Translates to: DCRSLGSRPLAGGRDPFLCGLRS*VWGKAG
Trigger: ACCAGCTTTTCCCCAGACCCAGCTCCGGAGCCCACA...GAGGAAGGGGTCCCGCCCTCCCGCCAGAGGCCTGGACCCAAGGGAACGGCAGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GGCAGCCCCAAGGGCCGCTGTTGGGTGGGAACGTGGGGCCAGCTTGGCACTCCTGGCACCCACCAGTCCTaGAAAACAGGGCTGGGACGC +
Preference number: 4 (lower is better)
Translates to: GSPKGRCWVGTWGQLGTPGTHQS*KTGLGR
Trigger: GCGTCCCAGCCCTGTTTTCCAGGACTGGTGGGTGCC...AGGAGTGCCAAGCTGGCCCCACGTTCCCACCCAACAGCGGCCCTTGGGGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR CCA 90 bp CTGACTGTTCCCGGGGTCAGGCCATGGGGATGCACAAGGCCACACCGTGAGGCAGGCAGGGCCGTGGACTaGGGCACCCACCAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: LTVPGVRPWGCTRPHREAGRAVD*GTHQSW
Trigger: CCAGGACTGGTGGGTGCCCCAGTCCACGGCCCTGCC...TGCCTCACGGTGTGGCCTTGTGCATCCCCATGGCCTGACCCCGGGAACAGTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp AGGGCCGTGGACTGGGGCACCCACCAGTCCTGGAAAACAGGGCTGGGACGCTGCCCCGGGGTCAGGCCATaGGGATGCACAAGGCCACAC +
Preference number: 4 (lower is better)
Translates to: RAVDWGTHQSWKTGLGRCPGVRP*GCTRPH
Trigger: GTGTGGCCTTGTGCATCCCCATGGCCTGACCCCGGG...GCAGCGTCCCAGCCCTGTTTTCCAGGACTGGTGGGTGCCCCAGTCCACGGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp ACATGCTCAAGTGAGCAGGGGCCCCAGGCCACGTCCAACTGTCCGCGAGGCATGGCTGGGCCACCCGCCTaGGAGCAGCTCCTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: TCSSEQGPQATSNCPRGMAGPPA*EQLLAA
Trigger: TGCTGCCAGGAGCTGCTCCCAGGCGGGTGGCCCAGC...CATGCCTCGCGGACAGTTGGACGTGGCCTGGGGCCCCTGCTCACTTGAGCATGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR CCA 90 bp AGCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTAGTCCTGCCATCCCCTaGTGCCTGAGAGAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: STWGQGLAAPRCTDEVGGSPAIP*CLREAG
Trigger: CCCAGCTTCTCTCAGGCACCAGGGGATGGCAGGACT...ACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR CCA 90 bp ACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCTGTCTAGGCCTCAGTaGACCGGCCAGCCTAATGCC +
Preference number: 4 (lower is better)
Translates to: TWGQGLAAPRCTDEVGGDLSRPQ*TGQPNA
Trigger: GGCATTAGGCTGGCCGGTCCACTGAGGCCTAGACAG...GTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR CCA 90 bp GGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCAGGGCCGCTGTTGGGTaGGAACGTGGGGCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: GLGRAPVVLGVKGTSAAPRAAVG*ERGASL
Trigger: CAAGCTGGCCCCACGTTCCCACCCAACAGCGGCCCT...GGGAGCAGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR CCA 90 bp GGCAGCCCCAAGGGCCGCTGTTGGGTGGGAACGTGGGGCCAGCTTGGCACTCCTTTGGGCCTGGACACCTaGCAGGAAGGCAGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: GSPKGRCWVGTWGQLGTPLGLDT*QEGSPK
Trigger: CTTGGGGCTGCCTTCCTGCCAGGTGTCCAGGCCCAA...AGGAGTGCCAAGCTGGCCCCACGTTCCCACCCAACAGCGGCCCTTGGGGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR CCA 90 bp GGCAGCCCCAAGGGCCGCTGTTGGGTGGGAACGTGGGGCCAGCTTGGCACTCCTAGGGTCCGGGAGCCGTaGCTCCTCCAGGTTAGTGGT +
Preference number: 4 (lower is better)
Translates to: GSPKGRCWVGTWGQLGTPRVREP*LLQVSG
Trigger: ACCACTAACCTGGAGGAGCCACGGCTCCCGGACCCT...AGGAGTGCCAAGCTGGCCCCACGTTCCCACCCAACAGCGGCCCTTGGGGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR CAA 72 bp CCAAGGGCCGCTGTTGGGTGGGAACGTGGGGCCAGCTaGGCACTCCTGAGCTGCCTCAGGCCTGGCCTGTCT +
Preference number: 4 (lower is better)
Translates to: PRAAVGWERGAS*ALLSCLRPGLS
Trigger: AGACAGGCCAGGCCTGAGGCAGCTCAGGAGTGCCAAGCTGGCCCCACGTTCCCACCCAACAGCGGCCCTTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR CAA 72 bp CTCCTCTCAGGCTCCCAGCAAAGGAGGCCGGCAGCTTaGACACGAGGGTCCGGGAGCCGTGGCTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LLSGSQQRRPAA*TRGSGSRGSSR
Trigger: CCTGGAGGAGCCACGGCTCCCGGACCCTCGTGTCAAAGCTGCCGGCCTCCTTTGCTGGGAGCCTGAGAGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR TCA 90 bp AGCAGCACCAGGAAATGCACGGAACCCATGGGACAGGGCTGGTTCTGGGAGGCTGGTCCCGCGGGGTCGTaGGTCGGGCCGGACCAGTTC +
Preference number: 4 (lower is better)
Translates to: SSTRKCTEPMGQGWFWEAGPAGS*VGPDQF
Trigger: GAACTGGTCCGGCCCGACTCACGACCCCGCGGGACC...AGCCTCCCAGAACCAGCCCTGTCCCATGGGTTCCGTGCATTTCCTGGTGCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317447.9
ENST00000614302.5
CDS-3UTR TCA 90 bp GGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGACCGCCACTCATCCATaGCGCCCACTGGGCCACGAC +
Preference number: 4 (lower is better)
Translates to: GSRCEGDVCCSPPDPQSQTATHP*RPLGHD
Trigger: GTCGTGGCCCAGTGGGCGTCATGGATGAGTGGCGGT...CTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACACCGAGAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp AGGCCAGGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTTGTAGATGGCTGGTGTaGGCGGCAGCAGCGGGACCC +
Preference number: 4 (lower is better)
Translates to: RPGLGRAPVVLGVKGTSACRWLV*AAAAGP
Trigger: GGGTCCCGCTGCTGCCGCTCACACCAGCCATCTACA...AGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACCTGGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp ACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCTTGATGATGTCCACTaGGGTCCGGCCTCGGATCCA +
Preference number: 4 (lower is better)
Translates to: TWGQGLAAPRCTDEVGGDLDDVH*GPASDP
Trigger: TGGATCCGAGGCCGGACCTCAGTGGACATCATCAAG...GTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp AGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTCACAGCCACATCTGTaGTGCTGGGGTGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: RGWLHRAAQMRSAVTRQRSQPHL*CWGGPA
Trigger: TGCTGGCCCACCCCAGCATCACAGATGTGGCTGTGA...CCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp GGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCCGTGGTTCTCGGTGTaGAGGGGACGTCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: GLGRAPVVLGVKGTSAAPPWFSV*RGRLLL
Trigger: GAGCAGCAGACGTCCCCTTCACACCGAGAACCACGG...GGGAGCAGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp GCCAGGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCCCGTGGTTCTCGGTGTaGAGGGGACGTCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: ARSWTGPRGSRCEGDVCCPWFSV*RGRLLL
Trigger: GAGCAGCAGACGTCCCCTTCACACCGAGAACCACGG...GCAGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp GGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCAGGGACGGTCTCCTTaGGCTGCAACAACTGGCCCG +
Preference number: 4 (lower is better)
Translates to: GLGRAPVVLGVKGTSAAPQGRSP*AATTGP
Trigger: CGGGCCAGTTGTTGCAGCTCAAGGAGACCGTCCCTG...GGGAGCAGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp TGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGTCTGCCGGGCAGGGACGGTCTCCTTaGGCTGCAACAACTGGCCCG +
Preference number: 4 (lower is better)
Translates to: CEGDVCCSPPDPQSQSAGQGRSP*AATTGP
Trigger: CGGGCCAGTTGTTGCAGCTCAAGGAGACCGTCCCTG...CCCGGCAGACTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp CCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGACACCAGGGACGGTGACCAGGCAGAGGTaGCACCAGGGACGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: PRCTDEVGGDQAEVTPGTVTRQR*HQGRSP
Trigger: AGGAGACCGTCCCTGGTGTCACCTCTGCCTGGTCAC...CGTCCCTGGTGTCACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp GGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCAGAGGGTTCACCGGCTaGGGGGCTGGTGTGGAGATG +
Preference number: 4 (lower is better)
Translates to: GLGRAPVVLGVKGTSAAPRGFTG*GAGVEM
Trigger: CATCTCCACACCAGCCCCTCAGCCGGTGAACCCTCT...GGGAGCAGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp AGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGGACACTGCTGGGCGATaGCTGTTACTTCCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: RGWLHRAAQMRSAVTRQRDTAGR*LLLPPG
Trigger: GCCTGGGGGAAGTAACAGTCATCGCCCAGCAGTGTC...CCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp GACTGCCGTTCCCTTGGGTCCAGGCCTCTGGCGGGAGGGCGGGACCCCTTCCTCCTGGACTGTAGTCTCTaGCTGCCGTTCCCTTGGGTC +
Preference number: 4 (lower is better)
Translates to: DCRSLGSRPLAGGRDPFLLDCSL*LPFPWV
Trigger: GACCCAAGGGAACGGCAGTCAGAGACTACAGTCCAG...GAGGAAGGGGTCCCGCCCTCCCGCCAGAGGCCTGGACCCAAGGGAACGGCAGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp CTGACTGTTCCCGGGGTCAGGCCATGGGGATGCACAAGGCCACACCGTGAGGCACCAGCTTGGCACTCCTaGGCTGCCTCAGGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: LTVPGVRPWGCTRPHREAPAWHS*AASGLA
Trigger: GGCCAGGCCTGAGGCAGCTCAGGAGTGCCAAGCTGG...TGCCTCACGGTGTGGCCTTGTGCATCCCCATGGCCTGACCCCGGGAACAGTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR GCA 90 bp GCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGGGGACAGGCGAAGGCTaGGGGAATAAAGCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: ARGWLHRAAQMRSAVTRQGTGEG*GNKAPC
Trigger: ACAGGGAGCTTTATTCCCGCAGCCTTCGCCTGTCCC...CTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp GACTGCCGTTCCCTTGGGTCCAGGCCTCTGGCGGGAGGGCGGGACCCCTTCCTCGGGACAGGCGAAGGCTaGGGGAATAAAGCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: DCRSLGSRPLAGGRDPFLGTGEG*GNKAPC
Trigger: ACAGGGAGCTTTATTCCCGCAGCCTTCGCCTGTCCC...GAGGAAGGGGTCCCGCCCTCCCGCCAGAGGCCTGGACCCAAGGGAACGGCAGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp AGCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGCCCTGATGTTTTGGTaGGTGCTCAGCACGCCCTTG +
Preference number: 4 (lower is better)
Translates to: STWGQGLAAPRCTDEVGGALMFW*VLSTPL
Trigger: CAAGGGCGTGCTGAGCACGCACCAAAACATCAGGGC...ACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp TGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGTCTGCCGGGACACCATGGACGTGGTaGAGCGGGAGCACGTGGAGG +
Preference number: 4 (lower is better)
Translates to: CEGDVCCSPPDPQSQSAGTPWTW*SGSTWR
Trigger: CCTCCACGTGCTCCCGCTGCACCACGTCCATGGTGT...CCCGGCAGACTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp ACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCCTCTCGTCTCCCTCTaGGTGGATGGTGTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: TWGQGLAAPRCTDEVGGDPLVSL*VDGVGA
Trigger: TGCTCCTACACCATCCACGCAGAGGGAGACGAGAGG...GTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp GCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGCATGAGGGGTGGAAGTaGCTGATGAGCGCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: ARGARGWLHRAAQMRSAVHEGWK*LMSAFL
Trigger: CAAGAAGGCGCTCATCAGGCACTTCCACCCCTCATG...CACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp GGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGCCCGCAGTCCCAGTCTaGCGGGTCATGAGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: GSRCEGDVCCSPPDPQSQPAVPV*RVMRGG
Trigger: TCCACCCCTCATGACCCGGCAGACTGGGACTGCGGG...CTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACACCGAGAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp CCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCGCAGTCCCAGTCTaGCGGGTCATGAGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: PVVLGVKGTSAAPHQTRSPAVPV*RVMRGG
Trigger: TCCACCCCTCATGACCCGGCAGACTGGGACTGCGGG...ACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACACCGAGAACCACGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp CCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTGAAGGGGACGTCTGCTaGTCCCCACCAGACCCGCAG +
Preference number: 4 (lower is better)
Translates to: PVVLGVKGTSAAPHQTRSEGDVC*SPPDPQ
Trigger: CTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTC...ACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACACCGAGAACCACGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp GCCAGGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCTGTGAAGGGGACGTCTaGTGCTCCCCACCAGACCCG +
Preference number: 4 (lower is better)
Translates to: ARSWTGPRGSRCEGDVCCCEGDV*CSPPDP
Trigger: CGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACA...GCAGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp AGGGCCGTGGACTGGGGCACCCACCAGTCCTGGAAAACAGGGCTGGGACGCTGCTGTGAAGGGGACGTCTaGTGCTCCCCACCAGACCCG +
Preference number: 4 (lower is better)
Translates to: RAVDWGTHQSWKTGLGRCCEGDV*CSPPDP
Trigger: CGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACA...GCAGCGTCCCAGCCCTGTTTTCCAGGACTGGTGGGTGCCCCAGTCCACGGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp AGGCCAGGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTCTGGCTGCACCGCGCTaGACAGATGAGGTCGGCGGT +
Preference number: 4 (lower is better)
Translates to: RPGLGRAPVVLGVKGTSALAAPR*TDEVGG
Trigger: ACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAG...AGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACCTGGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp GGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGGAAACCTCTGGGACCTaGCCTGGAGAGCCTGGCAAC +
Preference number: 4 (lower is better)
Translates to: GLAAPRCTDEVGGDQAEVETSGT*PGEPGN
Trigger: GTTGCCAGGCTCTCCAGGGCAGGTCCCAGAGGTTTC...CACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp ACATGCTCAAGTGAGCAGGGGCCCCAGGCCACGTCCAACTGTCCGCGAGGCATGGGCCCCCTGGGTGGCTaGCCAGACCTCCTATGTGGG +
Preference number: 4 (lower is better)
Translates to: TCSSEQGPQATSNCPRGMGPLGG*PDLLCG
Trigger: CCCACATAGGAGGTCTGGGCAGCCACCCAGGGGGCC...CATGCCTCGCGGACAGTTGGACGTGGCCTGGGGCCCCTGCTCACTTGAGCATGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp AGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGCCCCACAGTGGGAGCTaGTCTCCTCCAAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: RGWLHRAAQMRSAVTRQRPHSGS*SPPRAA
Trigger: TGCTGCTCTTGGAGGAGAGCAGCTCCCACTGTGGGG...CCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp TGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGTCTGCCGGGATGGGGCTGGCCTCCTaGCCGGCACACTCGTTTCTG +
Preference number: 4 (lower is better)
Translates to: CEGDVCCSPPDPQSQSAGMGLAS*PAHSFL
Trigger: CAGAAACGAGTGTGCCGGGCAGGAGGCCAGCCCCAT...CCCGGCAGACTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp CTGACTGTTCCCGGGGTCAGGCCATGGGGATGCACAAGGCCACACCGTGAGGCAGTGTGGGGTGGGCGCTaGCAGCCACGTGGGACTGTG +
Preference number: 4 (lower is better)
Translates to: LTVPGVRPWGCTRPHREAVWGGR*QPRGTV
Trigger: CACAGTCCCACGTGGCTGGCAGCGCCCACCCCACAC...TGCCTCACGGTGTGGCCTTGTGCATCCCCATGGCCTGACCCCGGGAACAGTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR GCA 90 bp GCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGACACCACCGTGCTGTGCCTGGTaGTGCGTGGGTCCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: AAPRCTDEVGGDQAEVTPPCCAW*CVGPEA
Trigger: AGCCTCAGGACCCACGCAGCACCAGGCACAGCACGG...TGGTGTCACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR CCA 90 bp TGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGTCTGCCGGGGTGTGGCGGCCGTGCTaGTCAACCAGGGCGATTCTG +
Preference number: 4 (lower is better)
Translates to: CEGDVCCSPPDPQSQSAGVWRPC*STRAIL
Trigger: CAGAATCGCCCTGGTTGACCAGCACGGCCGCCACAC...CCCGGCAGACTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCAGCTCCCTGTACGTGTaGCGGCCGTGCTGGTCAACC +
Preference number: 4 (lower is better)
Translates to: GLGRAPVVLGVKGTSAAPSSLYV*RPCWST
Trigger: GGTTGACCAGCACGGCCGCCACACGTACAGGGAGCT...GGGAGCAGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCAGCCTGCAGATCTCCTaGGACAGGCGAAGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: GLGRAPVVLGVKGTSAAPSLQIS*DRRRLR
Trigger: CCGCAGCCTTCGCCTGTCCCAGGAGATCTGCAGGCT...GGGAGCAGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGCCAGGTACTCCTGGCTaGCAAGGACCACAGAGCTCT +
Preference number: 4 (lower is better)
Translates to: ARGWLHRAAQMRSAVTRQPGTPG*QGPQSS
Trigger: AGAGCTCTGTGGTCCTTGCCAGCCAGGAGTACCTGG...CTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp ACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACAGCTCCAGGTACTCCTaGCTGGCAAGGACCACAGAG +
Preference number: 4 (lower is better)
Translates to: TWGQGLAAPRCTDEVGGDSSRYS*LARTTE
Trigger: CTCTGTGGTCCTTGCCAGCCAGGAGTACCTGGAGCT...GTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GTCTCTGACTGCCGTTCCCTTGGGTCCAGGCCTCTGGCGGGAGGGCGGGACCCCAGCTCCAGGTACTCCTaGCTGGCAAGGACCACAGAG +
Preference number: 4 (lower is better)
Translates to: VSDCRSLGSRPLAGGRDPSSRYS*LARTTE
Trigger: CTCTGTGGTCCTTGCCAGCCAGGAGTACCTGGAGCT...GGGGTCCCGCCCTCCCGCCAGAGGCCTGGACCCAAGGGAACGGCAGTCAGAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp ACATGCTCAAGTGAGCAGGGGCCCCAGGCCACGTCCAACTGTCCGCGAGGCATGCCTCCATCCCTGCTCTaGGACCGGGACCTCTGCCGG +
Preference number: 4 (lower is better)
Translates to: TCSSEQGPQATSNCPRGMPPSLL*DRDLCR
Trigger: CCGGCAGAGGTCCCGGTCCCAGAGCAGGGATGGAGG...CATGCCTCGCGGACAGTTGGACGTGGCCTGGGGCCCCTGCTCACTTGAGCATGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp ACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACACAGCCCTGATGTTTTaGTGCGTGCTCAGCACGCCC +
Preference number: 4 (lower is better)
Translates to: TWGQGLAAPRCTDEVGGDTALMF*CVLSTP
Trigger: GGGCGTGCTGAGCACGCACCAAAACATCAGGGCTGT...GTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp TGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGTCTGCCGGGGCGTTGACCACACCATaGACGTGGTGCAGCGGGAGC +
Preference number: 4 (lower is better)
Translates to: CEGDVCCSPPDPQSQSAGALTTP*TWCSGS
Trigger: GCTCCCGCTGCACCACGTCCATGGTGTGGTCAACGC...CCCGGCAGACTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GCCAGGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCGCGTTGACCACACCATaGACGTGGTGCAGCGGGAGC +
Preference number: 4 (lower is better)
Translates to: ARSWTGPRGSRCEGDVCCALTTP*TWCSGS
Trigger: GCTCCCGCTGCACCACGTCCATGGTGTGGTCAACGC...GCAGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp CAACACACCTTCCTGAGGTTTCTGCATCGGCCACGCCTGTGGGCTCCGGAGCTGGCAGGCGCACGGCAGTaGTCAGGGGCCCGGACAGAG +
Preference number: 4 (lower is better)
Translates to: QHTFLRFLHRPRLWAPELAGARQ*SGARTE
Trigger: CTCTGTCCGGGCCCCTGACCACTGCCGTGCGCCTGC...CAGCTCCGGAGCCCACAGGCGTGGCCGATGCAGAAACCTCAGGAAGGTGTGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GCCAGGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCACCCTGGGGTCACCTTaGTCCCCCTCTCGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: ARSWTGPRGSRCEGDVCCTLGSP*SPSRLP
Trigger: AGGGAGACGAGAGGGGGACCAAGGTGACCCCAGGGT...GCAGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp ACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACACAGCAGTGACCCGCTaGCCCCATGTCATATCCGGA +
Preference number: 4 (lower is better)
Translates to: TWGQGLAAPRCTDEVGGDTAVTR*PHVISG
Trigger: TCCGGATATGACATGGGGCCAGCGGGTCACTGCTGT...GTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGACAGCAGTGACCCGCTaGCCCCATGTCATATCCGGA +
Preference number: 4 (lower is better)
Translates to: ARGWLHRAAQMRSAVTRQTAVTR*PHVISG
Trigger: TCCGGATATGACATGGGGCCAGCGGGTCACTGCTGT...CTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGTCAATCTTGCCCATCTaGTTCCGCGGGATCTCCTCC +
Preference number: 4 (lower is better)
Translates to: ARGARGWLHRAAQMRSAVSILPI*FRGISS
Trigger: GGAGGAGATCCCGCGGAACCAGATGGGCAAGATTGA...CACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp TGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGTCTGCCGGGCCGGGTCATGAGGGGTaGAAGTGCCTGATGAGCGCC +
Preference number: 4 (lower is better)
Translates to: CEGDVCCSPPDPQSQSAGPGHEG*KCLMSA
Trigger: GGCGCTCATCAGGCACTTCCACCCCTCATGACCCGG...CCCGGCAGACTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp TGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGTCTGCCGGGTTGAGCTGCAACAACTaGCCCGAGGCTGGGGACCCC +
Preference number: 4 (lower is better)
Translates to: CEGDVCCSPPDPQSQSAGLSCNN*PEAGDP
Trigger: GGGGTCCCCAGCCTCGGGCCAGTTGTTGCAGCTCAA...CCCGGCAGACTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGAACTGCAGGGCACTGTaGGGCGGGAGGTGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: GSRCEGDVCCSPPDPQSQNCRAL*GGRCLS
Trigger: GCTGAGGCACCTCCCGCCCCACAGTGCCCTGCAGTT...CTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACACCGAGAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGACACCAAACTGCAGGGCACTGTaGGGCGGGAGGTGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: AAPRCTDEVGGDQAEVTPNCRAL*GGRCLS
Trigger: GCTGAGGCACCTCCCGCCCCACAGTGCCCTGCAGTT...TGGTGTCACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCCCAGACCTCCTATGTaGGCCGGGAGACACTGGCTC +
Preference number: 4 (lower is better)
Translates to: GLGRAPVVLGVKGTSAAPPRPPM*AGRHWL
Trigger: GAGCCAGTGTCTCCCGGCCCACATAGGAGGTCTGGG...GGGAGCAGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GGCAGCCCCAAGGGCCGCTGTTGGGTGGGAACGTGGGGCCAGCTTGGCACTCCTCACCGGCTGAGGGGCTaGTGTGGAGATGACCTGGAA +
Preference number: 4 (lower is better)
Translates to: GSPKGRCWVGTWGQLGTPHRLRG*CGDDLE
Trigger: TTCCAGGTCATCTCCACACCAGCCCCTCAGCCGGTG...AGGAGTGCCAAGCTGGCCCCACGTTCCCACCCAACAGCGGCCCTTGGGGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR CCA 90 bp CTGACTGTTCCCGGGGTCAGGCCATGGGGATGCACAAGGCCACACCGTGAGGCACATCGGCCACGCCTGTaGGCTCCGGAGCTGGGTCTG +
Preference number: 4 (lower is better)
Translates to: LTVPGVRPWGCTRPHREAHRPRL*APELGL
Trigger: CAGACCCAGCTCCGGAGCCCACAGGCGTGGCCGATG...TGCCTCACGGTGTGGCCTTGTGCATCCCCATGGCCTGACCCCGGGAACAGTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp AGCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTTGGGACGCTGCTCTGTaGCCTCAGACAAGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: STWGQGLAAPRCTDEVGGWDAAL*PQTSLV
Trigger: CACCAAGCTTGTCTGAGGCCACAGAGCAGCGTCCCA...ACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp ATGGGGCTGGCCTCCTGCCCGGCACACTCGTTTCTGGCCACTCTTTCAGACGTGTTGGGTCCAGGCCTCTaGCGGGAGGGCGGGACCCCT +
Preference number: 4 (lower is better)
Translates to: MGLASCPAHSFLATLSDVLGPGL*REGGTP
Trigger: AGGGGTCCCGCCCTCCCGCCAGAGGCCTGGACCCAA...CACGTCTGAAAGAGTGGCCAGAAACGAGTGTGCCGGGCAGGAGGCCAGCCCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp AGGCCAGGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGAAGGCCGACCAGCCTaGCACAGGGACCAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: RPGLGRAPVVLGVKGTSAEGRPA*HRDQLE
Trigger: CTCCAGCTGGTCCCTGTGCCAGGCTGGTCGGCCTTC...AGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACCTGGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GGCAGCCCCAAGGGCCGCTGTTGGGTGGGAACGTGGGGCCAGCTTGGCACTCCTACCAGCACATCCTACTaGCAGGCGCACGGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: GSPKGRCWVGTWGQLGTPTSTSY*QAHGSG
Trigger: ACCACTGCCGTGCGCCTGCCAGTAGGATGTGCTGGT...AGGAGTGCCAAGCTGGCCCCACGTTCCCACCCAACAGCGGCCCTTGGGGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR CCA 90 bp ACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACGGTGACTGTGGCCGGTaGCACTGGACAAAACCAGCA +
Preference number: 4 (lower is better)
Translates to: TWGQGLAAPRCTDEVGGDGDCGR*HWTKPA
Trigger: TGCTGGTTTTGTCCAGTGCCACCGGCCACAGTCACC...GTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR CCA 90 bp AGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGGCGCTGCCAGCCACGTaGGACTGTGGTATCCTCATG +
Preference number: 4 (lower is better)
Translates to: RGWLHRAAQMRSAVTRQRALPAT*DCGILM
Trigger: CATGAGGATACCACAGTCCCACGTGGCTGGCAGCGC...CCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR CCA 90 bp GCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGACACCAAAAGCCCCCACCCCTTaGCCAGGGCTAGAAGGGCCC +
Preference number: 4 (lower is better)
Translates to: AAPRCTDEVGGDQAEVTPKAPTP*PGLEGP
Trigger: GGGCCCTTCTAGCCCTGGCCAAGGGGTGGGGGCTTT...TGGTGTCACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR TCA 90 bp GGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGCGGTCACCACAGCCCTaGTGTTTTGGTGCGTGCTCA +
Preference number: 4 (lower is better)
Translates to: GLAAPRCTDEVGGDQAEVRSPQP*CFGACS
Trigger: TGAGCACGCACCAAAACATCAGGGCTGTGGTGACCG...CACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp CCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGACACCAGGGACGGACAGAGCAGCGCGTTaGCCACACCATGGACGTGGT +
Preference number: 4 (lower is better)
Translates to: PRCTDEVGGDQAEVTPGTDRAAR*PHHGRG
Trigger: ACCACGTCCATGGTGTGGTCAACGCGCTGCTCTGTC...CGTCCCTGGTGTCACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp GTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGTCTGCCGGGTGACAGAGCAGCGCGTTaGCCACACCATGGACGTGGT +
Preference number: 4 (lower is better)
Translates to: VKGTSAAPHQTRSPSLPGDRAAR*PHHGRG
Trigger: ACCACGTCCATGGTGTGGTCAACGCGCTGCTCTGTC...ACCCGGCAGACTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542688.5
CDS-3UTR TCA 90 bp GGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGCCACCTCCAGGGCGCTaGCCTTGTAGCCTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: GSRCEGDVCCSPPDPQSQPPPGR*PCSLQS
Trigger: AGACTGGAGGCTACAAGGTCAGCGCCCTGGAGGTGG...CTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACACCGAGAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp GCCAGGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCCTCCCTGTGGGACAGTaGGTGTCCTTCTCGGAGGGT +
Preference number: 4 (lower is better)
Translates to: ARSWTGPRGSRCEGDVCCLPVGQ*VSFSEG
Trigger: ACCCTCCGAGAAGGACACTCACTGTCCCACAGGGAG...GCAGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp CCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGACACCAGGGACGCTCCCTGTGGGACAGTaGGTGTCCTTCTCGGAGGGT +
Preference number: 4 (lower is better)
Translates to: PRCTDEVGGDQAEVTPGTLPVGQ*VSFSEG
Trigger: ACCCTCCGAGAAGGACACTCACTGTCCCACAGGGAG...CGTCCCTGGTGTCACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp GGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGTTCTGGCCCACTCTTTaGGCTCCCTGTGGGACAGTG +
Preference number: 4 (lower is better)
Translates to: GLAAPRCTDEVGGDQAEVFWPTL*APCGTV
Trigger: CACTGTCCCACAGGGAGCTCAAAGAGTGGGCCAGAA...CACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp AGGGCCGTGGACTGGGGCACCCACCAGTCCTGGAAAACAGGGCTGGGACGCTGCCAGTCTGCCGGGTCATaGGGGGTGGAAGTGCCTGAT +
Preference number: 4 (lower is better)
Translates to: RAVDWGTHQSWKTGLGRCQSAGS*GVEVPD
Trigger: ATCAGGCACTTCCACCCCTCATGACCCGGCAGACTG...GCAGCGTCCCAGCCCTGTTTTCCAGGACTGGTGGGTGCCCCAGTCCACGGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp AGGCCAGGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTCAGGGACGGTCTCCTTaGGCTGCAACAACTGGCCCG +
Preference number: 4 (lower is better)
Translates to: RPGLGRAPVVLGVKGTSAQGRSP*AATTGP
Trigger: CGGGCCAGTTGTTGCAGCTCAAGGAGACCGTCCCTG...AGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACCTGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp GAGGGAGGGGCAGAAAGAATGGGGCGGCACCTGCCACAGGCTGTGTGTGGGACTGGAGGGAGGAGAGGATaGGTTCCCTCCAGGACGGGC +
Preference number: 4 (lower is better)
Translates to: EGGAERMGRHLPQAVCGTGGRRG*VPSRTG
Trigger: GCCCGTCCTGGAGGGAACTCATCCTCTCCTCCCTCC...AGTCCCACACACAGCCTGTGGCAGGTGCCGCCCCATTCTTTCTGCCCCTCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR GCA 90 bp GGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCCACGGGGCAGGATCTaGCTCGCCACAACTCTTCCT +
Preference number: 4 (lower is better)
Translates to: GLGRAPVVLGVKGTSAAPPRGRI*LATTLP
Trigger: AGGAAGAGTTGTGGCGAGGCAGATCCTGCCCCGTGG...GGGAGCAGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000614302.5
CDS-3UTR GCA 90 bp AGCACCAGCTCCGAGGGCACCGCGTACGGGGCCAGGACATTTCTGGCCCACTCTCACATGGGGCAGCATTaGACTGACAGGCGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: STSSEGTAYGARTFLAHSHMGQH*TDRRPS
Trigger: GCTCGGCCGCCTGTCAGTGCAATGCTGCCCCATGTG...AGAGTGGGCCAGAAATGTCCTGGCCCCGTACGCGGTGCCCTCGGAGCTGGTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542688.5
CDS-3UTR GCA 90 bp GGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGCACACCCGCAGAGCCTaGAGATCTCCTGGGACAGGC +
Preference number: 4 (lower is better)
Translates to: GSRCEGDVCCSPPDPQSQHTRRA*RSPGTG
Trigger: GCCTGTCCCAGGAGATCTGCAGGCTCTGCGGGTGTG...CTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACACCGAGAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp GCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGACACCATGGGACCGGGACCTCTaGCGGTTCCTCTACTGCTCC +
Preference number: 4 (lower is better)
Translates to: AAPRCTDEVGGDQAEVTPWDRDL*RFLYCS
Trigger: GGAGCAGTAGAGGAACCGGCAGAGGTCCCGGTCCCA...TGGTGTCACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp GGCAGCCCCAAGGGCCGCTGTTGGGTGGGAACGTGGGGCCAGCTTGGCACTCCTGCCCTGATGTTTTGGTaGGTGCTCAGCACGCCCTTG +
Preference number: 4 (lower is better)
Translates to: GSPKGRCWVGTWGQLGTPALMFW*VLSTPL
Trigger: CAAGGGCGTGCTGAGCACGCACCAAAACATCAGGGC...AGGAGTGCCAAGCTGGCCCCACGTTCCCACCCAACAGCGGCCCTTGGGGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR GCA 90 bp GCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGACACCAACACCATGGACGTGGTaGAGCGGGAGCACGTGGAGG +
Preference number: 4 (lower is better)
Translates to: AAPRCTDEVGGDQAEVTPTPWTW*SGSTWR
Trigger: CCTCCACGTGCTCCCGCTGCACCACGTCCATGGTGT...TGGTGTCACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp GCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGAAGAAATCCTGGGCGTaGGGCTGGGTAAAATGCCTG +
Preference number: 4 (lower is better)
Translates to: ARGARGWLHRAAQMRSAVKKSWA*GWVKCL
Trigger: CAGGCATTTTACCCAGCCGCACGCCCAGGATTTCTT...CACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp CCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGACACCAGGGACGTGCCGATCTCGGTCATaGCATACCGCTCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: PRCTDEVGGDQAEVTPGTCRSRS*HTAPAG
Trigger: CCCTGCTGGAGCGGTATGGCATGACCGAGATCGGCA...CGTCCCTGGTGTCACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp GCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGCCTTCTTGTCAATCTTaGCCATCTGGTTCCGCGGGA +
Preference number: 4 (lower is better)
Translates to: ARGARGWLHRAAQMRSAVPSCQS*PSGSAG
Trigger: TCCCGCGGAACCAGATGGGCAAGATTGACAAGAAGG...CACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp GCCGCTGGGACAGAGTCCAGGTGGGAGGGCAGTGTGTGGTGTGTGTGTGGCCAGTGTGAAGGGGACGTCTaGTGCTCCCCACCAGACCCG +
Preference number: 4 (lower is better)
Translates to: AAGTESRWEGSVWCVCGQCEGDV*CSPPDP
Trigger: CGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACA...CTGGCCACACACACACCACACACTGCCCTCCCACCTGGACTCTGTCCCAGCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR GCA 90 bp GGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGACGGTCTCCTTGAGCTaGAACAACTGGCCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: GLAAPRCTDEVGGDQAEVTVSLS*NNWPEA
Trigger: AGCCTCGGGCCAGTTGTTGCAGCTCAAGGAGACCGT...CACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp TGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGTCTGCCGGGGAAACCTCTGGGACCTaGCCTGGAGAGCCTGGCAAC +
Preference number: 4 (lower is better)
Translates to: CEGDVCCSPPDPQSQSAGETSGT*PGEPGN
Trigger: GTTGCCAGGCTCTCCAGGGCAGGTCCCAGAGGTTTC...CCCGGCAGACTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp AGCCACGGGGCGTCTCACTCCTCCACACGCCACTCACGTTCTGCTCTCTGCTGGACACCTGGAGAGGGCTaGACAGCCACGGGGCGTCTC +
Preference number: 4 (lower is better)
Translates to: SHGASHSSTRHSRSALCWTPGEG*TATGRL
Trigger: GAGACGCCCCGTGGCTGTGCAGCCCTCTCCAGGTGT...CCAGCAGAGAGCAGAACGTGAGTGGCGTGTGGAGGAGTGAGACGCCCCGTGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543676.1
CDS-3UTR GCA 90 bp GCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGCAGCGAGCCGGGCTTTaGTCATTCCGTCCATATTAC +
Preference number: 4 (lower is better)
Translates to: ARGARGWLHRAAQMRSAVQRAGL*SFRPYY
Trigger: GTAATATGGACGGAATGAGCAAAGCCCGGCTCGCTG...CACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR GCA 90 bp GAGGGAGGGGCAGAAAGAATGGGGCGGCACCTGCCACAGGCTGTGTGTGGGACTGGTGCACACAGCGCTTaGCACACCGCCCACTGCCTC +
Preference number: 4 (lower is better)
Translates to: EGGAERMGRHLPQAVCGTGAHSA*HTAHCL
Trigger: GAGGCAGTGGGCGGTGTGGCAAGCGCTGTGTGCACC...AGTCCCACACACAGCCTGTGGCAGGTGCCGCCCCATTCTTTCTGCCCCTCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR CCA 90 bp TGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGTCTGCCGGGAAATGCTCATCCTCCTaGGGCAGGCACCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: CEGDVCCSPPDPQSQSAGKCSSS*GRHQAW
Trigger: CCAGGCCTGGTGCCTGCCCCAGGAGGATGAGCATTT...CCCGGCAGACTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317447.9
ENST00000614302.5
CDS-3UTR CCA 90 bp CCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTGTGTGGCGGCCGTGCTaGTCAACCAGGGCGATTCTG +
Preference number: 4 (lower is better)
Translates to: PVVLGVKGTSAAPHQTRSVWRPC*STRAIL
Trigger: CAGAATCGCCCTGGTTGACCAGCACGGCCGCCACAC...ACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACACCGAGAACCACGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp AGGCCAGGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTAGCTCCCTGTACGTGTaGCGGCCGTGCTGGTCAACC +
Preference number: 4 (lower is better)
Translates to: RPGLGRAPVVLGVKGTSASSLYV*RPCWST
Trigger: GGTTGACCAGCACGGCCGCCACACGTACAGGGAGCT...AGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACCTGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GAGGCAGAGCAGGCTCAGGTCTTGTGTGTTGGGCCTGGACACCTGGCAGGAAGGTGCTCAGCACGCCCTTaGGCCTCCCCGTGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: EAEQAQVLCVGPGHLAGRCSARP*ASPWSH
Trigger: GTGGGACCACGGGGAGGCCCAAGGGCGTGCTGAGCA...CCTTCCTGCCAGGTGTCCAGGCCCAACACACAAGACCTGAGCCTGCTCTGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR CCA 90 bp AGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGACAGCCCTGATGTTTTaGTGCGTGCTCAGCACGCCC +
Preference number: 4 (lower is better)
Translates to: RGWLHRAAQMRSAVTRQRTALMF*CVLSTP
Trigger: GGGCGTGCTGAGCACGCACCAAAACATCAGGGCTGT...CCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGTGCAGCGGGAGCACGTaGAGGATCACGTCGTCTTTG +
Preference number: 4 (lower is better)
Translates to: GLAAPRCTDEVGGDQAEVCSGST*RITSSL
Trigger: CAAAGACGACGTGATCCTCCACGTGCTCCCGCTGCA...CACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GCAGCAGGCGCGGTGCCACGGCTTTGGGGACCAGCTGGTCACCAGGAGTCCTGCTGCAGCGGGAGCACGTaGAGGATCACGTCGTCTTTG +
Preference number: 4 (lower is better)
Translates to: AAGAVPRLWGPAGHQESCCSGST*RITSSL
Trigger: CAAAGACGACGTGATCCTCCACGTGCTCCCGCTGCA...GCAGGACTCCTGGTGACCAGCTGGTCCCCAAAGCCGTGGCACCGCGCCTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR CCA 90 bp GCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGACACCAACCACACCATGGACGTaGTGCAGCGGGAGCACGTGG +
Preference number: 4 (lower is better)
Translates to: AAPRCTDEVGGDQAEVTPTTPWT*CSGSTW
Trigger: CCACGTGCTCCCGCTGCACCACGTCCATGGTGTGGT...TGGTGTCACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGACCACACCATGGACGTaGTGCAGCGGGAGCACGTGG +
Preference number: 4 (lower is better)
Translates to: GSRCEGDVCCSPPDPQSQTTPWT*CSGSTW
Trigger: CCACGTGCTCCCGCTGCACCACGTCCATGGTGTGGT...CTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACACCGAGAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp CCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGACACCAGGGACGCGCTCCAGCAGGGTGTaGCCCGTGATGTTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: PRCTDEVGGDQAEVTPGTRSSRV*PVMFFH
Trigger: GTGGAAGAACATCACGGGCCACACCCTGCTGGAGCG...CGTCCCTGGTGTCACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGCTGTACTCCAGGCAGTaGGGTCCCCACGGAACCTGG +
Preference number: 4 (lower is better)
Translates to: GSRCEGDVCCSPPDPQSQLYSRQ*GPHGTW
Trigger: CCAGGTTCCGTGGGGACCCCACTGCCTGGAGTACAG...CTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACACCGAGAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000614302.5
CDS-3UTR CCA 90 bp GGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCTCCCTCTGCGTGGATaGTGTAGGAGCAGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: GLGRAPVVLGVKGTSAAPLPLRG*CRSRLP
Trigger: GGGAAGCCTGCTCCTACACCATCCACGCAGAGGGAG...GGGAGCAGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GCCAGGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCCTCCCTCTGCGTGGATaGTGTAGGAGCAGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: ARSWTGPRGSRCEGDVCCLPLRG*CRSRLP
Trigger: GGGAAGCCTGCTCCTACACCATCCACGCAGAGGGAG...GCAGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp AGGCCAGGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTACCCTGGGGTCACCTTaGTCCCCCTCTCGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: RPGLGRAPVVLGVKGTSATLGSP*SPSRLP
Trigger: AGGGAGACGAGAGGGGGACCAAGGTGACCCCAGGGT...AGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACCTGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGTCTGTGATGCTGGGGTaGGCCAGCAGGTGCCACTCC +
Preference number: 4 (lower is better)
Translates to: GSRCEGDVCCSPPDPQSQSVMLG*ASRCHS
Trigger: GGAGTGGCACCTGCTGGCCCACCCCAGCATCACAGA...CTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACACCGAGAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGACACCACCGGGTCATGAGGGGTaGAAGTGCCTGATGAGCGCC +
Preference number: 4 (lower is better)
Translates to: AAPRCTDEVGGDQAEVTPPGHEG*KCLMSA
Trigger: GGCGCTCATCAGGCACTTCCACCCCTCATGACCCGG...TGGTGTCACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp AGCACCAGCTCCGAGGGCACCGCGTACGGGGCCAGGACATTTCTGGCCCACTCTCCGGGTCATGAGGGGTaGAAGTGCCTGATGAGCGCC +
Preference number: 4 (lower is better)
Translates to: STSSEGTAYGARTFLAHSPGHEG*KCLMSA
Trigger: GGCGCTCATCAGGCACTTCCACCCCTCATGACCCGG...AGAGTGGGCCAGAAATGTCCTGGCCCCGTACGCGGTGCCCTCGGAGCTGGTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542688.5
CDS-3UTR CCA 90 bp CCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCTCTGGGACCTGCCCTaGAGAGCCTGGCAACTGCAG +
Preference number: 4 (lower is better)
Translates to: PVVLGVKGTSAAPHQTRSLWDLP*RAWQLQ
Trigger: CTGCAGTTGCCAGGCTCTCCAGGGCAGGTCCCAGAG...ACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACACCGAGAACCACGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp AGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGGGACAGGGCTGGTTCTaGGAGGCTTGTGAACCCTCA +
Preference number: 4 (lower is better)
Translates to: RGWLHRAAQMRSAVTRQRGQGWF*EACEPS
Trigger: TGAGGGTTCACAAGCCTCCCAGAACCAGCCCTGTCC...CCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp TGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGTCTGCCGGGTGTGGGCTCCGGAGCTaGGTCTGGGGAAAAGCTGGT +
Preference number: 4 (lower is better)
Translates to: CEGDVCCSPPDPQSQSAGCGLRS*VWGKAG
Trigger: ACCAGCTTTTCCCCAGACCCAGCTCCGGAGCCCACA...CCCGGCAGACTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp CCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGACACCAGGGACGACTTCCCCCAGGCTGTaGGGAGGAGGCAGCCTATTC +
Preference number: 4 (lower is better)
Translates to: PRCTDEVGGDQAEVTPGTTSPRL*GGGSLF
Trigger: GAATAGGCTGCCTCCTCCCCACAGCCTGGGGGAAGT...CGTCCCTGGTGTCACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp ACATGCTCAAGTGAGCAGGGGCCCCAGGCCACGTCCAACTGTCCGCGAGGCATGAGCCTGAGATGGGGCTaGCCTCCTGCCCGGCACACT +
Preference number: 4 (lower is better)
Translates to: TCSSEQGPQATSNCPRGMSLRWG*PPARHT
Trigger: AGTGTGCCGGGCAGGAGGCCAGCCCCATCTCAGGCT...CATGCCTCGCGGACAGTTGGACGTGGCCTGGGGCCCCTGCTCACTTGAGCATGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GCCAGGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCCCTGGAAAACAGGGCTaGGACGCTGCTCTGTGGCCT +
Preference number: 4 (lower is better)
Translates to: ARSWTGPRGSRCEGDVCCPGKQG*DAALWP
Trigger: AGGCCACAGAGCAGCGTCCCAGCCCTGTTTTCCAGG...GCAGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp AGGGCCGTGGACTGGGGCACCCACCAGTCCTGGAAAACAGGGCTGGGACGCTGCCCTGGAAAACAGGGCTaGGACGCTGCTCTGTGGCCT +
Preference number: 4 (lower is better)
Translates to: RAVDWGTHQSWKTGLGRCPGKQG*DAALWP
Trigger: AGGCCACAGAGCAGCGTCCCAGCCCTGTTTTCCAGG...GCAGCGTCCCAGCCCTGTTTTCCAGGACTGGTGGGTGCCCCAGTCCACGGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGGGCACCCACCAGTCCTaGAAAACAGGGCTGGGACGC +
Preference number: 4 (lower is better)
Translates to: GSRCEGDVCCSPPDPQSQGTHQS*KTGLGR
Trigger: GCGTCCCAGCCCTGTTTTCCAGGACTGGTGGGTGCC...CTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACACCGAGAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp ACGAATGGAGGAGGCAGGAGCTGGGTCCATGGTCTCCCTGCCAGGGAAGCCGCAGAAGGCCGACCAGCCTaGCACAGGGACCAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: TNGGGRSWVHGLPAREAAEGRPA*HRDQLE
Trigger: CTCCAGCTGGTCCCTGTGCCAGGCTGGTCGGCCTTC...TGCGGCTTCCCTGGCAGGGAGACCATGGACCCAGCTCCTGCCTCCTCCATTCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR CCA 90 bp TGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGTCTGCCGGGGGGCTTGTTCTCGGCTaGTGGAGCAGAGGGGAACCA +
Preference number: 4 (lower is better)
Translates to: CEGDVCCSPPDPQSQSAGGLVLG*WSRGEP
Trigger: TGGTTCCCCTCTGCTCCACCAGCCGAGAACAAGCCC...CCCGGCAGACTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACA
66% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp CTGACTGACACCTGGAGAGGGCTGCACAGCCACGGGGCGTCTCACTCCTCCACAATGGGCTGGGGCCCTTaGTCCCCCTCTCGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: LTDTWRGLHSHGASHSSTMGWGP*SPSRLP
Trigger: AGGGAGACGAGAGGGGGACCAAGGGCCCCAGCCCAT...TGTGGAGGAGTGAGACGCCCCGTGGCTGTGCAGCCCTCTCCAGGTGTCAGTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000543676.1
CDS-3UTR CCA 90 bp GACTGCCGTTCCCTTGGGTCCAGGCCTCTGGCGGGAGGGCGGGACCCCTTCCTCAGCCACGTGGGACTGTaGTATCCTCATGGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: DCRSLGSRPLAGGRDPFLSHVGL*YPHGAQ
Trigger: CTGAGCTCCATGAGGATACCACAGTCCCACGTGGCT...GAGGAAGGGGTCCCGCCCTCCCGCCAGAGGCCTGGACCCAAGGGAACGGCAGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR CCA 90 bp CCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTTGTGTGGGACTTTGCTaGCAGCAGCAGGCGCGGTGC +
Preference number: 4 (lower is better)
Translates to: PVVLGVKGTSAAPHQTRSCVGLC*QQQARC
Trigger: GCACCGCGCCTGCTGCTGCCAGCAAAGTCCCACACA...ACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACACCGAGAACCACGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR CCA 90 bp AGGTTAGTGGTGCACACAGCGCTTGCCACACCGCCCACTGCCTCACTCCGTGCTGCAGGGGCTTCACCCTaGCCCCTGATGAGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: RLVVHTALATPPTASLRAAGASP*PLMREG
Trigger: CCCCTCCCTCATCAGGGGCCAGGGTGAAGCCCCTGC...AGCACGGAGTGAGGCAGTGGGCGGTGTGGCAAGCGCTGTGTGCACCACTAACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR CCA 90 bp GCAGCAGGCGCGGTGCCACGGCTTTGGGGACCAGCTGGTCACCAGGAGTCCTGCCTTGTGTGTTGGGCCTaGACACCTGGCAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: AAGAVPRLWGPAGHQESCLVCWA*TPGRKA
Trigger: TGCCTTCCTGCCAGGTGTCCAGGCCCAACACACAAG...GCAGGACTCCTGGTGACCAGCTGGTCCCCAAAGCCGTGGCACCGCGCCTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR TCA 90 bp CATTCCGGGGGCAGAATGTTCTGGGTAAGTTCAGGCCAGACACTGCTGGGCGATGGTCCCGCGGGGTCGTaGGTCGGGCCGGACCAGTTC +
Preference number: 4 (lower is better)
Translates to: HSGGRMFWVSSGQTLLGDGPAGS*VGPDQF
Trigger: GAACTGGTCCGGCCCGACTCACGACCCCGCGGGACC...ATCGCCCAGCAGTGTCTGGCCTGAACTTACCCAGAACATTCTGCCCCCGGAATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317447.9
ENST00000614302.5
CDS-3UTR TCA 90 bp CTGGCCTCCTGCCCGGCACACTCGTTTCTGGCCACTCTTTCAGACGTGCATTCCGGGGCAGCATTGCACTaGCAGGCGGCCGAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: LASCPAHSFLATLSDVHSGAALH*QAAEPA
Trigger: AGCTGGCTCGGCCGCCTGTCAGTGCAATGCTGCCCC...GGAATGCACGTCTGAAAGAGTGGCCAGAAACGAGTGTGCCGGGCAGGAGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317447.9
ENST00000614302.5
CDS-3UTR TCA 90 bp GGAAATGCACGGAACCCATGGGACAGGGCTGGTTCTGGGAGGCTTGTGAACCCTAGGCCAGGGCACGGGTaGACACCGGGGCGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: GNARNPWDRAGSGRLVNPRPGHG*TPGRSC
Trigger: ACAGGAGCGCCCCGGTGTTCACCCGTGCCCTGGCCT...AGGGTTCACAAGCCTCCCAGAACCAGCCCTGTCCCATGGGTTCCGTGCATTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp AGTGAGTGTCCTTCTCGGAGGGTCACCACAGCAGTGACCCGCTGGCCCCATGTCACCGCCACTCATCCATaGCGCCCACTGGGCCACGAC +
Preference number: 4 (lower is better)
Translates to: SECPSRRVTTAVTRWPHVTATHP*RPLGHD
Trigger: GTCGTGGCCCAGTGGGCGTCATGGATGAGTGGCGGT...GACATGGGGCCAGCGGGTCACTGCTGTGGTGACCCTCCGAGAAGGACACTCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542688.5
CDS-3UTR TCA 90 bp GGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGTCTGGGAGTCGCAGATaGCATACTCCAGCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: GSRCEGDVCCSPPDPQSQSGSRR*HTPAGP
Trigger: CGGCCCAGCTGGAGTATGTCATCTGCGACTCCCAGA...CTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACACCGAGAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp GAGTGTCCTTCTCGGAGGGTCACCACAGCAGTGACCCGCTGGCCCCATGTCATAGGACCCCCAGCTTCCTaGCCACCGGGCTCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: ECPSRRVTTAVTRWPHVIGPPAS*PPGSGA
Trigger: AGCTCCTGAGCCCGGTGGTCAGGAAGCTGGGGGTCC...TATGACATGGGGCCAGCGGGTCACTGCTGTGGTGACCCTCCGAGAAGGACACTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542688.5
CDS-3UTR TCA 90 bp GGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCGGTCACCACAGCCCTaGTGTTTTGGTGCGTGCTCA +
Preference number: 4 (lower is better)
Translates to: GLGRAPVVLGVKGTSAAPRSPQP*CFGACS
Trigger: TGAGCACGCACCAAAACATCAGGGCTGTGGTGACCG...GGGAGCAGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp GCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGCCTCTGTGGGTTTTCTaGGACAATGCGCACCTGTAC +
Preference number: 4 (lower is better)
Translates to: ARGWLHRAAQMRSAVTRQPLWVF*DNAHLY
Trigger: GTACAGGTGCGCATTGTCTCAGAAAACCCACAGAGG...CTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp TGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGTCTGCCGGGCTTGATGATGTCCACTaGGGTCCGGCCTCGGATCCA +
Preference number: 4 (lower is better)
Translates to: CEGDVCCSPPDPQSQSAGLDDVH*GPASDP
Trigger: TGGATCCGAGGCCGGACCTCAGTGGACATCATCAAG...CCCGGCAGACTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp GGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCTTGATGATGTCCACTaGGGTCCGGCCTCGGATCCA +
Preference number: 4 (lower is better)
Translates to: GLGRAPVVLGVKGTSAAPLDDVH*GPASDP
Trigger: TGGATCCGAGGCCGGACCTCAGTGGACATCATCAAG...GGGAGCAGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp AGGCCAGGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTTCACAGCCACATCTGTaGTGCTGGGGTGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: RPGLGRAPVVLGVKGTSASQPHL*CWGGPA
Trigger: TGCTGGCCCACCCCAGCATCACAGATGTGGCTGTGA...AGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACCTGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp GGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGCTCCCTGTGGGACAGTaGGTGTCCTTCTCGGAGGGT +
Preference number: 4 (lower is better)
Translates to: GSRCEGDVCCSPPDPQSQLPVGQ*VSFSEG
Trigger: ACCCTCCGAGAAGGACACTCACTGTCCCACAGGGAG...CTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACACCGAGAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp AGGGCCGTGGACTGGGGCACCCACCAGTCCTGGAAAACAGGGCTGGGACGCTGCTTCTGGCCCACTCTTTaGGCTCCCTGTGGGACAGTG +
Preference number: 4 (lower is better)
Translates to: RAVDWGTHQSWKTGLGRCFWPTL*APCGTV
Trigger: CACTGTCCCACAGGGAGCTCAAAGAGTGGGCCAGAA...GCAGCGTCCCAGCCCTGTTTTCCAGGACTGGTGGGTGCCCCAGTCCACGGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp GCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGACACCACAGTCTGCCGGGTCATaGGGGGTGGAAGTGCCTGAT +
Preference number: 4 (lower is better)
Translates to: AAPRCTDEVGGDQAEVTPQSAGS*GVEVPD
Trigger: ATCAGGCACTTCCACCCCTCATGACCCGGCAGACTG...TGGTGTCACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp AGCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGGGGACCCCACATGGTaGTTTCATCCCAAACAGTTC +
Preference number: 4 (lower is better)
Translates to: STWGQGLAAPRCTDEVGGGDPTW*FHPKQF
Trigger: GAACTGTTTGGGATGAAATCACCATGTGGGGTCCCC...ACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp ACAGCCACATCTGTGATGCTGGGGTGGGCCAGCAGGTGCCACTCCACCTCCAGGCAGGGACGGTCTCCTTaGGCTGCAACAACTGGCCCG +
Preference number: 4 (lower is better)
Translates to: TATSVMLGWASRCHSTSRQGRSP*AATTGP
Trigger: CGGGCCAGTTGTTGCAGCTCAAGGAGACCGTCCCTG...CCTGGAGGTGGAGTGGCACCTGCTGGCCCACCCCAGCATCACAGATGTGGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542688.5
CDS-3UTR TCA 90 bp ACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCTGGGGAAAAGCTGGTaGGCCACAGACATGAAATGG +
Preference number: 4 (lower is better)
Translates to: TWGQGLAAPRCTDEVGGDLGKSW*ATDMKW
Trigger: CCATTTCATGTCTGTGGCTCACCAGCTTTTCCCCAG...GTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp AGCAGCACCAGGAAATGCACGGAACCCATGGGACAGGGCTGGTTCTGGGAGGCTGGCGACATGCTCAAGTaGGCAGGGGCCCCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: SSTRKCTEPMGQGWFWEAGDMLK*AGAPGH
Trigger: GTGGCCTGGGGCCCCTGCTCACTTGAGCATGTCGCC...AGCCTCCCAGAACCAGCCCTGTCCCATGGGTTCCGTGCATTTCCTGGTGCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp ACACCTGGAGAGGGCTGCACAGCCACGGGGCGTCTCACTCCTCCACACGCCACTAGGGTTGGAACTGGCTaGGCTGGGAGGTCCTCGAGT +
Preference number: 4 (lower is better)
Translates to: TPGEGCTATGRLTPPHATRVGTG*AGRSSS
Trigger: ACTCGAGGACCTCCCAGCTCAGCCAGTTCCAACCCT...AGTGGCGTGTGGAGGAGTGAGACGCCCCGTGGCTGTGCAGCCCTCTCCAGGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543676.1
CDS-3UTR GCA 90 bp GGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGCCACGGGGCAGGATCTaGCTCGCCACAACTCTTCCT +
Preference number: 4 (lower is better)
Translates to: GSRCEGDVCCSPPDPQSQPRGRI*LATTLP
Trigger: AGGAAGAGTTGTGGCGAGGCAGATCCTGCCCCGTGG...CTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACACCGAGAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000614302.5
CDS-3UTR GCA 90 bp GGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGCCTGTAGAGGGGGACTaGCACACCGCCACTCATCCA +
Preference number: 4 (lower is better)
Translates to: GSRCEGDVCCSPPDPQSQPVEGD*HTATHP
Trigger: TGGATGAGTGGCGGTGTGGCAGTCCCCCTCTACAGG...CTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACACCGAGAACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp GGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCTTGTTCCTCCATCCCTaGTCTGGGACCGGGACCTCT +
Preference number: 4 (lower is better)
Translates to: GLGRAPVVLGVKGTSAAPLFLHP*SGTGTS
Trigger: AGAGGTCCCGGTCCCAGAGCAGGGATGGAGGAACAA...GGGAGCAGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp CCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGACACCAGGGACGGCCCTGATGTTTTGGTaGGTGCTCAGCACGCCCTTG +
Preference number: 4 (lower is better)
Translates to: PRCTDEVGGDQAEVTPGTALMFW*VLSTPL
Trigger: CAAGGGCGTGCTGAGCACGCACCAAAACATCAGGGC...CGTCCCTGGTGTCACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp CACCAGCTCCGAGGGCACCGCGTACGGGGCCAGGACATTTCTGGCCCACTCTTTACACCATGGACGTGGTaGAGCGGGAGCACGTGGAGG +
Preference number: 4 (lower is better)
Translates to: HQLRGHRVRGQDISGPLFTPWTW*SGSTWR
Trigger: CCTCCACGTGCTCCCGCTGCACCACGTCCATGGTGT...AAAGAGTGGGCCAGAAATGTCCTGGCCCCGTACGCGGTGCCCTCGGAGCTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542688.5
CDS-3UTR GCA 90 bp GCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAAGAAATCCTGGGCGTaGGGCTGGGTAAAATGCCTG +
Preference number: 4 (lower is better)
Translates to: ARGWLHRAAQMRSAVTRQKKSWA*GWVKCL
Trigger: CAGGCATTTTACCCAGCCGCACGCCCAGGATTTCTT...CTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp AGGCCAGGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTTGCCGATCTCGGTCATaGCATACCGCTCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: RPGLGRAPVVLGVKGTSACRSRS*HTAPAG
Trigger: CCCTGCTGGAGCGGTATGGCATGACCGAGATCGGCA...AGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACCTGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp TGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGTCTGCCGGGCCTCTCGTCTCCCTCTaGGTGGATGGTGTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: CEGDVCCSPPDPQSQSAGPLVSL*VDGVGA
Trigger: TGCTCCTACACCATCCACGCAGAGGGAGACGAGAGG...CCCGGCAGACTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp GGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCCTCTCGTCTCCCTCTaGGTGGATGGTGTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: GLGRAPVVLGVKGTSAAPPLVSL*VDGVGA
Trigger: TGCTCCTACACCATCCACGCAGAGGGAGACGAGAGG...GGGAGCAGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp GGAAATGCACGGAACCCATGGGACAGGGCTGGTTCTGGGAGGCTTGTGAACCCTGGGTGGGCCAGCAGGTaGCACTCCACCTCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: GNARNPWDRAGSGRLVNPGWASR*HSTSRA
Trigger: CGCCCTGGAGGTGGAGTGGCACCTGCTGGCCCACCC...AGGGTTCACAAGCCTCCCAGAACCAGCCCTGTCCCATGGGTTCCGTGCATTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp ACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCCTTCTTGTCAATCTTaGCCATCTGGTTCCGCGGGA +
Preference number: 4 (lower is better)
Translates to: TWGQGLAAPRCTDEVGGDPSCQS*PSGSAG
Trigger: TCCCGCGGAACCAGATGGGCAAGATTGACAAGAAGG...GTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp CCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGACACCAGGGACGACGGTCTCCTTGAGCTaGAACAACTGGCCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: PRCTDEVGGDQAEVTPGTTVSLS*NNWPEA
Trigger: AGCCTCGGGCCAGTTGTTGCAGCTCAAGGAGACCGT...CGTCCCTGGTGTCACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp TCCGGGGGCAGAATGTTCTGGGTAAGTTCAGGCCAGACACTGCTGGGCGATGACCTGTGGGGCGGGAGGTaGCTCAGCACGTGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: SGGRMFWVSSGQTLLGDDLWGGR*LSTWGQ
Trigger: CTGGCCCCACGTGCTGAGGCACCTCCCGCCCCACAG...GTCATCGCCCAGCAGTGTCTGGCCTGAACTTACCCAGAACATTCTGCCCCCGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp GGCAGCCCCAAGGGCCGCTGTTGGGTGGGAACGTGGGGCCAGCTTGGCACTCCTGCCCCGCTAAGTAAATaGAACGTGGGTGCACCCAAC +
Preference number: 4 (lower is better)
Translates to: GSPKGRCWVGTWGQLGTPAPLSK*NVGAPN
Trigger: GTTGGGTGCACCCACGTTGCATTTACTTAGCGGGGC...AGGAGTGCCAAGCTGGCCCCACGTTCCCACCCAACAGCGGCCCTTGGGGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR GCA 90 bp GCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGGTTCAGGCCAGACACTaGTGGGCGATGACTGTTACT +
Preference number: 4 (lower is better)
Translates to: ARGWLHRAAQMRSAVTRQVQARH*WAMTVT
Trigger: AGTAACAGTCATCGCCCAGCAGTGTCTGGCCTGAAC...CTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp AACGTCTGGACTGTAGTCTCTGACTGCCGTTCCCTTGGGTCCAGGCCTCTGGCGCAGCAGCAGGCGCGGTaGCACGGCTTTGGGGACCAG +
Preference number: 4 (lower is better)
Translates to: NVWTVVSDCRSLGSRPLAQQQAR*HGFGDQ
Trigger: CTGGTCCCCAAAGCCGTGGCACCGCGCCTGCTGCTG...CGCCAGAGGCCTGGACCCAAGGGAACGGCAGTCAGAGACTACAGTCCAGACGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR GCA 90 bp GAGGCAGAGCAGGCTCAGGTCTTGTGTGTTGGGCCTGGACACCTGGCAGGAAGGCCTCACTCCGTGCTGTaGCTGGTGCTGCGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: EAEQAQVLCVGPGHLAGRPHSVL*LVLRGS
Trigger: GGACCCACGCAGCACCAGGCACAGCACGGAGTGAGG...CCTTCCTGCCAGGTGTCCAGGCCCAACACACAAGACCTGAGCCTGCTCTGCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR CCA 90 bp TCCGGGGGCAGAATGTTCTGGGTAAGTTCAGGCCAGACACTGCTGGGCGATGACGGCAGGCACCAGGCCTaGCGCTGGAACCCGGAAGGC +
Preference number: 4 (lower is better)
Translates to: SGGRMFWVSSGQTLLGDDGRHQA*RWNPEG
Trigger: GCCTTCCGGGTTCCAGCGCCAGGCCTGGTGCCTGCC...GTCATCGCCCAGCAGTGTCTGGCCTGAACTTACCCAGAACATTCTGCCCCCGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317447.9
ENST00000614302.5
CDS-3UTR CCA 90 bp CAACACACCTTCCTGAGGTTTCTGCATCGGCCACGCCTGTGGGCTCCGGAGCTGGTCCGAGCGGGCCACTaGGGCTGTGTGCAGAAGACC +
Preference number: 4 (lower is better)
Translates to: QHTFLRFLHRPRLWAPELVRAGH*GCVQKT
Trigger: GGTCTTCTGCACACAGCCCCAGTGGCCCGCTCGGAC...CAGCTCCGGAGCCCACAGGCGTGGCCGATGCAGAAACCTCAGGAAGGTGTGTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp ACATGCTCAAGTGAGCAGGGGCCCCAGGCCACGTCCAACTGTCCGCGAGGCATGGTGTGGCGGCCGTGCTaGTCAACCAGGGCGATTCTG +
Preference number: 4 (lower is better)
Translates to: TCSSEQGPQATSNCPRGMVWRPC*STRAIL
Trigger: CAGAATCGCCCTGGTTGACCAGCACGGCCGCCACAC...CATGCCTCGCGGACAGTTGGACGTGGCCTGGGGCCCCTGCTCACTTGAGCATGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp AGCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTAGGACCACAGAGCTCTaGGAGTCGCAGATGACATAC +
Preference number: 4 (lower is better)
Translates to: STWGQGLAAPRCTDEVGGRTTEL*ESQMTY
Trigger: GTATGTCATCTGCGACTCCCAGAGCTCTGTGGTCCT...ACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GACTGCCGTTCCCTTGGGTCCAGGCCTCTGGCGGGAGGGCGGGACCCCTTCCTCAGGACCACAGAGCTCTaGGAGTCGCAGATGACATAC +
Preference number: 4 (lower is better)
Translates to: DCRSLGSRPLAGGRDPFLRTTEL*ESQMTY
Trigger: GTATGTCATCTGCGACTCCCAGAGCTCTGTGGTCCT...GAGGAAGGGGTCCCGCCCTCCCGCCAGAGGCCTGGACCCAAGGGAACGGCAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp TGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGTCTGCCGGGCCAGGTACTCCTGGCTaGCAAGGACCACAGAGCTCT +
Preference number: 4 (lower is better)
Translates to: CEGDVCCSPPDPQSQSAGPGTPG*QGPQSS
Trigger: AGAGCTCTGTGGTCCTTGCCAGCCAGGAGTACCTGG...CCCGGCAGACTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp CCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGACACCAGGGACGACAGCCCTGATGTTTTaGTGCGTGCTCAGCACGCCC +
Preference number: 4 (lower is better)
Translates to: PRCTDEVGGDQAEVTPGTTALMF*CVLSTP
Trigger: GGGCGTGCTGAGCACGCACCAAAACATCAGGGCTGT...CGTCCCTGGTGTCACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGGTCCATGCCCACTTGTaGACCAGCCCGGTCACCACA +
Preference number: 4 (lower is better)
Translates to: GSRCEGDVCCSPPDPQSQVHAHL*TSPVTT
Trigger: TGTGGTGACCGGGCTGGTCCACAAGTGGGCATGGAC...CTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACACCGAGAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp AGCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGGATCACGTCGTCTTTaGTCCATGCCCACTTGTGGA +
Preference number: 4 (lower is better)
Translates to: STWGQGLAAPRCTDEVGGGSRRL*SMPTCG
Trigger: TCCACAAGTGGGCATGGACCAAAGACGACGTGATCC...ACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp CCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGACACCAGGGACGTGCAGCGGGAGCACGTaGAGGATCACGTCGTCTTTG +
Preference number: 4 (lower is better)
Translates to: PRCTDEVGGDQAEVTPGTCSGST*RITSSL
Trigger: CAAAGACGACGTGATCCTCCACGTGCTCCCGCTGCA...CGTCCCTGGTGTCACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCTGCAGCGGGAGCACGTaGAGGATCACGTCGTCTTTG +
Preference number: 4 (lower is better)
Translates to: GLGRAPVVLGVKGTSAAPCSGST*RITSSL
Trigger: CAAAGACGACGTGATCCTCCACGTGCTCCCGCTGCA...GGGAGCAGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GAGGGAGGGGCAGAAAGAATGGGGCGGCACCTGCCACAGGCTGTGTGTGGGACTACCACACCATGGACGTaGTGCAGCGGGAGCACGTGG +
Preference number: 4 (lower is better)
Translates to: EGGAERMGRHLPQAVCGTTTPWT*CSGSTW
Trigger: CCACGTGCTCCCGCTGCACCACGTCCATGGTGTGGT...AGTCCCACACACAGCCTGTGGCAGGTGCCGCCCCATTCTTTCTGCCCCTCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR CCA 90 bp GGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGGCACGCAAGAAATCCTaGGCGTGCGGCTGGGTAAAA +
Preference number: 4 (lower is better)
Translates to: GLAAPRCTDEVGGDQAEVARKKS*ACGWVK
Trigger: TTTTACCCAGCCGCACGCCCAGGATTTCTTGCGTGC...CACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GCAGCAGGCGCGGTGCCACGGCTTTGGGGACCAGCTGGTCACCAGGAGTCCTGCGCACGCAAGAAATCCTaGGCGTGCGGCTGGGTAAAA +
Preference number: 4 (lower is better)
Translates to: AAGAVPRLWGPAGHQESCARKKS*ACGWVK
Trigger: TTTTACCCAGCCGCACGCCCAGGATTTCTTGCGTGC...GCAGGACTCCTGGTGACCAGCTGGTCCCCAAAGCCGTGGCACCGCGCCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR CCA 90 bp ACACCTGGAGAGGGCTGCACAGCCACGGGGCGTCTCACTCCTCCACACGCCACTCGCTCCAGCAGGGTGTaGCCCGTGATGTTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: TPGEGCTATGRLTPPHATRSSRV*PVMFFH
Trigger: GTGGAAGAACATCACGGGCCACACCCTGCTGGAGCG...AGTGGCGTGTGGAGGAGTGAGACGCCCCGTGGCTGTGCAGCCCTCTCCAGGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543676.1
CDS-3UTR CCA 90 bp CAGCCACGGGGCGTCTCACTCCTCCACACGCCACTCACGTTCTGCTCTCTGCTGCTGTACTCCAGGCAGTaGGGTCCCCACGGAACCTGG +
Preference number: 4 (lower is better)
Translates to: QPRGVSLLHTPLTFCSLLLYSRQ*GPHGTW
Trigger: CCAGGTTCCGTGGGGACCCCACTGCCTGGAGTACAG...CAGCAGAGAGCAGAACGTGAGTGGCGTGTGGAGGAGTGAGACGCCCCGTGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543676.1
CDS-3UTR CCA 90 bp AGCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTCTTTTCTTCAAACCCTaGGGTCACCTTGGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: STWGQGLAAPRCTDEVGGLFFKP*GHLGPP
Trigger: AGGGGGACCAAGGTGACCCCAGGGTTTGAAGAAAAG...ACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp ACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCCTCGGATCCAGTACTaGCCATCCTTAAACACCACG +
Preference number: 4 (lower is better)
Translates to: TWGQGLAAPRCTDEVGGDPRIQY*PSLNTT
Trigger: CGTGGTGTTTAAGGATGGCCAGTACTGGATCCGAGG...GTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp CTGGAAAACAGGGCTGGGACGCTGCTCTGTGGCCTCAGACAAGCTTGGTGGGCGAGGGAGGCCAGGTCTTaGACGGGCCCCCGTGGTTCT +
Preference number: 4 (lower is better)
Translates to: LENRAGTLLCGLRQAWWAREARS*TGPRGS
Trigger: AGAACCACGGGGGCCCGTCCAAGACCTGGCCTCCCT...CGCCCACCAAGCTTGTCTGAGGCCACAGAGCAGCGTCCCAGCCCTGTTTTCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp CAACACACCTTCCTGAGGTTTCTGCATCGGCCACGCCTGTGGGCTCCGGAGCTGAGGGAGGCCAGGTCTTaGACGGGCCCCCGTGGTTCT +
Preference number: 4 (lower is better)
Translates to: QHTFLRFLHRPRLWAPELREARS*TGPRGS
Trigger: AGAACCACGGGGGCCCGTCCAAGACCTGGCCTCCCT...CAGCTCCGGAGCCCACAGGCGTGGCCGATGCAGAAACCTCAGGAAGGTGTGTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp CCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCAACTGGCCCGAGGCTaGGGACCCCACATGGTGATT +
Preference number: 4 (lower is better)
Translates to: PVVLGVKGTSAAPHQTRSQLARG*GPHMVI
Trigger: AATCACCATGTGGGGTCCCCAGCCTCGGGCCAGTTG...ACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACACCGAGAACCACGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGCAACTGGCCCGAGGCTaGGGACCCCACATGGTGATT +
Preference number: 4 (lower is better)
Translates to: GSRCEGDVCCSPPDPQSQQLARG*GPHMVI
Trigger: AATCACCATGTGGGGTCCCCAGCCTCGGGCCAGTTG...CTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACACCGAGAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp CTGACTGTTCCCGGGGTCAGGCCATGGGGATGCACAAGGCCACACCGTGAGGCACTGCCCTGGAGAGCCTaGCAACTGCAGGGCACTGTG +
Preference number: 4 (lower is better)
Translates to: LTVPGVRPWGCTRPHREALPWRA*QLQGTV
Trigger: CACAGTGCCCTGCAGTTGCCAGGCTCTCCAGGGCAG...TGCCTCACGGTGTGGCCTTGTGCATCCCCATGGCCTGACCCCGGGAACAGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GCCAGGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCTTTGTGGGAAACCTCTaGGACCTGCCCTGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: ARSWTGPRGSRCEGDVCCFVGNL*DLPWRA
Trigger: GGCTCTCCAGGGCAGGTCCCAGAGGTTTCCCACAAA...GCAGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCTTTGTGGGAAACCTCTaGGACCTGCCCTGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: GLGRAPVVLGVKGTSAAPFVGNL*DLPWRA
Trigger: GGCTCTCCAGGGCAGGTCCCAGAGGTTTCCCACAAA...GGGAGCAGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp TGGACACACAGTAGTGTGCAGGGTGGCAGGTGTCCCCACAGTGGGAGCTGCTCTGGAGGGCCCCCTGGGTaGCTGCCCAGACCTCCTATG +
Preference number: 4 (lower is better)
Translates to: WTHSSVQGGRCPHSGSCSGGPPG*LPRPPM
Trigger: CATAGGAGGTCTGGGCAGCCACCCAGGGGGCCCTCC...AGAGCAGCTCCCACTGTGGGGACACCTGCCACCCTGCACACTACTGTGTGTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GCCAGGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCGGACAGGGCTGGTTCTaGGAGGCTTGTGAACCCTCA +
Preference number: 4 (lower is better)
Translates to: ARSWTGPRGSRCEGDVCCGQGWF*EACEPS
Trigger: TGAGGGTTCACAAGCCTCCCAGAACCAGCCCTGTCC...GCAGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp TGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGTCTGCCGGGCCCATGGGACAGGGCTaGTTCTGGGAGGCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: CEGDVCCSPPDPQSQSAGPMGQG*FWEACE
Trigger: TTCACAAGCCTCCCAGAACCAGCCCTGTCCCATGGG...CCCGGCAGACTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp AGGGCCGTGGACTGGGGCACCCACCAGTCCTGGAAAACAGGGCTGGGACGCTGCTGGGACGCTGCTCTGTaGCCTCAGACAAGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: RAVDWGTHQSWKTGLGRCWDAAL*PQTSLV
Trigger: CACCAAGCTTGTCTGAGGCCACAGAGCAGCGTCCCA...GCAGCGTCCCAGCCCTGTTTTCCAGGACTGGTGGGTGCCCCAGTCCACGGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp TCCGGGGGCAGAATGTTCTGGGTAAGTTCAGGCCAGACACTGCTGGGCGATGACGGCAGGGCCGTGGACTaGGGCACCCACCAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: SGGRMFWVSSGQTLLGDDGRAVD*GTHQSW
Trigger: CCAGGACTGGTGGGTGCCCCAGTCCACGGCCCTGCC...GTCATCGCCCAGCAGTGTCTGGCCTGAACTTACCCAGAACATTCTGCCCCCGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp TCCAAGAGCAGCACCAGGAAATGCACGGAACCCATGGGACAGGGCTGGTTCTGGGGTGGGGCAGGGCCGTaGACTGGGGCACCCACCAGT +
Preference number: 4 (lower is better)
Translates to: SKSSTRKCTEPMGQGWFWGGAGP*TGAPTS
Trigger: ACTGGTGGGTGCCCCAGTCCACGGCCCTGCCCCACC...CCAGAACCAGCCCTGTCCCATGGGTTCCGTGCATTTCCTGGTGCTGCTCTTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp TCCGGGGGCAGAATGTTCTGGGTAAGTTCAGGCCAGACACTGCTGGGCGATGACTTGGGTCCAGGCCTCTaGCGGGAGGGCGGGACCCCT +
Preference number: 4 (lower is better)
Translates to: SGGRMFWVSSGQTLLGDDLGPGL*REGGTP
Trigger: AGGGGTCCCGCCCTCCCGCCAGAGGCCTGGACCCAA...GTCATCGCCCAGCAGTGTCTGGCCTGAACTTACCCAGAACATTCTGCCCCCGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGGCTTTCTGTAGTTTGTaGTCAACGAGCTCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: ARGARGWLHRAAQMRSAVAFCSL*STSSRL
Trigger: GAGCCTGGAGCTCGTTGACCACAAACTACAGAAAGC...CACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GAGGCAGAGCAGGCTCAGGTCTTGTGTGTTGGGCCTGGACACCTGGCAGGAAGGGGCCTGGCTGGGCACTaGCGGACTGTGTGCACGAAG +
Preference number: 4 (lower is better)
Translates to: EAEQAQVLCVGPGHLAGRGLAGH*RTVCTK
Trigger: CTTCGTGCACACAGTCCGCCAGTGCCCAGCCAGGCC...CCTTCCTGCCAGGTGTCCAGGCCCAACACACAAGACCTGAGCCTGCTCTGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR CCA 90 bp GGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGGGGCTTGTTCTCGGCTaGTGGAGCAGAGGGGAACCA +
Preference number: 4 (lower is better)
Translates to: GSRCEGDVCCSPPDPQSQGLVLG*WSRGEP
Trigger: TGGTTCCCCTCTGCTCCACCAGCCGAGAACAAGCCC...CTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACACCGAGAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGGTCCATGCCCACTTGTaGACCAGCCCGGTCACGAGA +
Preference number: 4 (lower is better)
Translates to: GSRCEGDVCCSPPDPQSQVHAHL*TSPVTR
Trigger: TCTCGTGACCGGGCTGGTCCACAAGTGGGCATGGAC...CTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACACCGAGAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378345.8
CDS-3UTR CCA 90 bp AGCCACGGGGCGTCTCACTCCTCCACACGCCACTCACGTTCTGCTCTCTGCTGGGACAACAGCATGGGCTaGGGCCCTTGGTCCCCCTCT +
Preference number: 4 (lower is better)
Translates to: SHGASHSSTRHSRSALCWDNSMG*GPWSPS
Trigger: AGAGGGGGACCAAGGGCCCCAGCCCATGCTGTTGTC...CCAGCAGAGAGCAGAACGTGAGTGGCGTGTGGAGGAGTGAGACGCCCCGTGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543676.1
CDS-3UTR CCA 90 bp GCAGCAGGCGCGGTGCCACGGCTTTGGGGACCAGCTGGTCACCAGGAGTCCTGCTGTGGCCGGTGGCACTaGACAAAACCAGCACATCCT +
Preference number: 4 (lower is better)
Translates to: AAGAVPRLWGPAGHQESCCGRWH*TKPAHP
Trigger: AGGATGTGCTGGTTTTGTCCAGTGCCACCGGCCACA...GCAGGACTCCTGGTGACCAGCTGGTCCCCAAAGCCGTGGCACCGCGCCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR CCA 90 bp GGCCAGACACTGCTGGGCGATGACTGTTACTTCCCCCAGGCTGTGGGGAGGAGGCTGTACTCCAGGCAGTaGGGTCCCCACGGAACCAGC +
Preference number: 4 (lower is better)
Translates to: GQTLLGDDCYFPQAVGRRLYSRQ*GPHGTS
Trigger: GCTGGTTCCGTGGGGACCCCACTGCCTGGAGTACAG...CCTCCTCCCCACAGCCTGGGGGAAGTAACAGTCATCGCCCAGCAGTGTCTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR CCA 90 bp GCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGCCTTCTCACTGTGGCTaGCAACAAGCTGCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: ARGWLHRAAQMRSAVTRQPSHCG*QQAAVL
Trigger: CAGAACAGCAGCTTGTTGCCAGCCACAGTGAGAAGG...CTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR CCA 90 bp GGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGACCTCGTCTCTCTTGTaGCTGCTGTGGTCCACACCT +
Preference number: 4 (lower is better)
Translates to: GLAAPRCTDEVGGDQAEVTSSLL*LLWSTP
Trigger: AGGTGTGGACCACAGCAGCCACAAGAGAGACGAGGT...CACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR TCA 90 bp TCCGGGGGCAGAATGTTCTGGGTAAGTTCAGGCCAGACACTGCTGGGCGATGACGGACCCCCAGCTTCCTaGCCACCGGGCTCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: SGGRMFWVSSGQTLLGDDGPPAS*PPGSGA
Trigger: AGCTCCTGAGCCCGGTGGTCAGGAAGCTGGGGGTCC...GTCATCGCCCAGCAGTGTCTGGCCTGAACTTACCCAGAACATTCTGCCCCCGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp CTGGCCTCCTGCCCGGCACACTCGTTTCTGGCCACTCTTTCAGACGTGCATTCCTGTAGATGGCTGGTGTaGGCGGCAGCAGCGGGACCC +
Preference number: 4 (lower is better)
Translates to: LASCPAHSFLATLSDVHSCRWLV*AAAAGP
Trigger: GGGTCCCGCTGCTGCCGCTCACACCAGCCATCTACA...GGAATGCACGTCTGAAAGAGTGGCCAGAAACGAGTGTGCCGGGCAGGAGGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp TGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGTCTGCCGGGTCCCACTGGTGTAGATaGTCATGGCGCCCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: CEGDVCCSPPDPQSQSAGSHWCR*SWRPCS
Trigger: GGAACAAGGGCGCCATGATCATCTACACCAGTGGGA...CCCGGCAGACTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp GCCAGGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCACTGGTGTAGATaGTCATGGCGCCCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: ARSWTGPRGSRCEGDVCCSHWCR*SWRPCS
Trigger: GGAACAAGGGCGCCATGATCATCTACACCAGTGGGA...GCAGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp AGGGCCGTGGACTGGGGCACCCACCAGTCCTGGAAAACAGGGCTGGGACGCTGCTCCCACTGGTGTAGATaGTCATGGCGCCCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: RAVDWGTHQSWKTGLGRCSHWCR*SWRPCS
Trigger: GGAACAAGGGCGCCATGATCATCTACACCAGTGGGA...GCAGCGTCCCAGCCCTGTTTTCCAGGACTGGTGGGTGCCCCAGTCCACGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp AGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGAAACCTGCTGAGGGCTaGACTCAGGCATCATCACAC +
Preference number: 4 (lower is better)
Translates to: RGWLHRAAQMRSAVTRQRKPAEG*TQASSH
Trigger: GTGTGATGATGCCTGAGTTCAGCCCTCAGCAGGTTT...CCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp GGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGAAACCTGCTGAGGGCTaGACTCAGGCATCATCACAC +
Preference number: 4 (lower is better)
Translates to: GLAAPRCTDEVGGDQAEVKPAEG*TQASSH
Trigger: GTGTGATGATGCCTGAGTTCAGCCCTCAGCAGGTTT...CACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp GGCAGCCCCAAGGGCCGCTGTTGGGTGGGAACGTGGGGCCAGCTTGGCACTCCTTTTTCCCAAACCTGCTaGGGGCTGAACTCAGGCATC +
Preference number: 4 (lower is better)
Translates to: GSPKGRCWVGTWGQLGTPFSQTC*GLNSGI
Trigger: GATGCCTGAGTTCAGCCCTCAGCAGGTTTGGGAAAA...AGGAGTGCCAAGCTGGCCCCACGTTCCCACCCAACAGCGGCCCTTGGGGCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR TCA 90 bp AGGCCAGGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCAGGGTGTGGCCCGTaGTGTTCTTCCACTTCTCCA +
Preference number: 4 (lower is better)
Translates to: RPGLGRAPVVLGVKGTSAAGCGP*CSSTSP
Trigger: TGGAGAAGTGGAAGAACATCACGGGCCACACCCTGC...AGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACCTGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp GCACAGGCTGAGCCCCGTCCCTGCAGACAGGGTTGGAACTGGCTGAGCTGGGAGGCAGGGTGTGGCCCGTaGTGTTCTTCCACTTCTCCA +
Preference number: 4 (lower is better)
Translates to: AQAEPRPCRQGWNWLSWEAGCGP*CSSTSP
Trigger: TGGAGAAGTGGAAGAACATCACGGGCCACACCCTGC...CTCCCAGCTCAGCCAGTTCCAACCCTGTCTGCAGGGACGGGGCTCAGCCTGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543676.1
CDS-3UTR TCA 90 bp CCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTTTCTGGCCCACTCTTTaGGCTCCCTGTGGGACAGTG +
Preference number: 4 (lower is better)
Translates to: PVVLGVKGTSAAPHQTRSFWPTL*APCGTV
Trigger: CACTGTCCCACAGGGAGCTCAAAGAGTGGGCCAGAA...ACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACACCGAGAACCACGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp GCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGACACCATTCTGGCCCACTCTTTaGGCTCCCTGTGGGACAGTG +
Preference number: 4 (lower is better)
Translates to: AAPRCTDEVGGDQAEVTPFWPTL*APCGTV
Trigger: CACTGTCCCACAGGGAGCTCAAAGAGTGGGCCAGAA...TGGTGTCACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp ACGAATGGAGGAGGCAGGAGCTGGGTCCATGGTCTCCCTGCCAGGGAAGCCGCACAGTCTGCCGGGTCATaGGGGGTGGAAGTGCCTGAT +
Preference number: 4 (lower is better)
Translates to: TNGGGRSWVHGLPAREAAQSAGS*GVEVPD
Trigger: ATCAGGCACTTCCACCCCTCATGACCCGGCAGACTG...TGCGGCTTCCCTGGCAGGGAGACCATGGACCCAGCTCCTGCCTCCTCCATTCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR TCA 90 bp CTGGAAAACAGGGCTGGGACGCTGCTCTGTGGCCTCAGACAAGCTTGGTGGGCGGGGCTGGTGTGGAGATaGCCTGGAAAGTCCCTGCGC +
Preference number: 4 (lower is better)
Translates to: LENRAGTLLCGLRQAWWAGLVWR*PGKSLR
Trigger: GCGCAGGGACTTTCCAGGTCATCTCCACACCAGCCC...CGCCCACCAAGCTTGTCTGAGGCCACAGAGCAGCGTCCCAGCCCTGTTTTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp GGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCACAACACACCTTCCTaGGGTTTCTGCATCGGCCAC +
Preference number: 4 (lower is better)
Translates to: GLGRAPVVLGVKGTSAAPHNTPS*GFCIGH
Trigger: GTGGCCGATGCAGAAACCTCAGGAAGGTGTGTTGTG...GGGAGCAGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp TGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGTCTGCCGGGCACAACACACCTTCCTaGGGTTTCTGCATCGGCCAC +
Preference number: 4 (lower is better)
Translates to: CEGDVCCSPPDPQSQSAGHNTPS*GFCIGH
Trigger: GTGGCCGATGCAGAAACCTCAGGAAGGTGTGTTGTG...CCCGGCAGACTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp GGCCAGACACTGCTGGGCGATGACTGTTACTTCCCCCAGGCTGTGGGGAGGAGGTACGTGTGGCGGCCGTaGTGGTCAACCAGGGCGATT +
Preference number: 4 (lower is better)
Translates to: GQTLLGDDCYFPQAVGRRYVWRP*WSTRAI
Trigger: AATCGCCCTGGTTGACCAGCACGGCCGCCACACGTA...CCTCCTCCCCACAGCCTGGGGGAAGTAACAGTCATCGCCCAGCAGTGTCTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp GGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGTTGTTCCTCCATCCCTaGTCTGGGACCGGGACCTCT +
Preference number: 4 (lower is better)
Translates to: GSRCEGDVCCSPPDPQSQLFLHP*SGTGTS
Trigger: AGAGGTCCCGGTCCCAGAGCAGGGATGGAGGAACAA...CTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACACCGAGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp AAACGAATGGAGGAGGCAGGAGCTGGGTCCATGGTCTCCCTGCCAGGGAAGCCGACACCATGGACGTGGTaGAGCGGGAGCACGTGGAGG +
Preference number: 4 (lower is better)
Translates to: KRMEEAGAGSMVSLPGKPTPWTW*SGSTWR
Trigger: CCTCCACGTGCTCCCGCTGCACCACGTCCATGGTGT...CGGCTTCCCTGGCAGGGAGACCATGGACCCAGCTCCTGCCTCCTCCATTCGTTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR GCA 90 bp AGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGAAGAAATCCTGGGCGTaGGGCTGGGTAAAATGCCTG +
Preference number: 4 (lower is better)
Translates to: RGWLHRAAQMRSAVTRQRKKSWA*GWVKCL
Trigger: CAGGCATTTTACCCAGCCGCACGCCCAGGATTTCTT...CCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp GCCCCGTCCCTGCAGACAGGGTTGGAACTGGCTGAGCTGGGAGGTCCTCGAGTTTGCCGATCTCGGTCATaGCATACCGCTCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: APSLQTGLELAELGGPRVCRSRS*HTAPAG
Trigger: CCCTGCTGGAGCGGTATGGCATGACCGAGATCGGCA...AACTCGAGGACCTCCCAGCTCAGCCAGTTCCAACCCTGTCTGCAGGGACGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543676.1
CDS-3UTR GCA 90 bp GCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGGGTTTTCTGAGACAATaGGCACCTGTACTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: ARGWLHRAAQMRSAVTRQGFLRQ*APVLQA
Trigger: TGCCTGGAGTACAGGTGCGCATTGTCTCAGAAAACC...CTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp GCAGTGACCCGCTGGCCCCATGTCATATCCGGAACTCCAATCACAGCCACATCTGGGTGGGCCAGCAGGTaGCACTCCACCTCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: AVTRWPHVISGTPITATSGWASR*HSTSRA
Trigger: CGCCCTGGAGGTGGAGTGGCACCTGCTGGCCCACCC...AGATGTGGCTGTGATTGGAGTTCCGGATATGACATGGGGCCAGCGGGTCACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542688.5
CDS-3UTR GCA 90 bp TTTAATGGGGAGGGAGGAGAGGATGAGTTCCCTCCAGGACGGGCTTGTTCTCGGGGGTGGGCCAGCAGGTaGCACTCCACCTCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: FNGEGGEDEFPPGRACSRGWASR*HSTSRA
Trigger: CGCCCTGGAGGTGGAGTGGCACCTGCTGGCCCACCC...CCGAGAACAAGCCCGTCCTGGAGGGAACTCATCCTCTCCTCCCTCCCCATTAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp GGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGCCTTCTTGTCAATCTTaGCCATCTGGTTCCGCGGGA +
Preference number: 4 (lower is better)
Translates to: GLAAPRCTDEVGGDQAEVPSCQS*PSGSAG
Trigger: TCCCGCGGAACCAGATGGGCAAGATTGACAAGAAGG...CACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp GGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCATGAGGGGTGGAAGTaGCTGATGAGCGCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: GLGRAPVVLGVKGTSAAPHEGWK*LMSAFL
Trigger: CAAGAAGGCGCTCATCAGGCACTTCCACCCCTCATG...GGGAGCAGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp GCACCTGCAGCCGACTGTAGCTTTGCTCTTGGACGGGGAACATCCACTGGCTGGGAAGGGGACGTCTGCTaGTCCCCACCAGACCCGCAG +
Preference number: 4 (lower is better)
Translates to: APAADCSFALGRGTSTGWEGDVC*SPPDPQ
Trigger: CTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTC...CCAGCCAGTGGATGTTCCCCGTCCAAGAGCAAAGCTACAGTCGGCTGCAGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR GCA 90 bp GCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGACACCAACGGTCTCCTTGAGCTaGAACAACTGGCCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: AAPRCTDEVGGDQAEVTPTVSLS*NNWPEA
Trigger: AGCCTCGGGCCAGTTGTTGCAGCTCAAGGAGACCGT...TGGTGTCACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp AATCACAGCCACATCTGTGATGCTGGGGTGGGCCAGCAGGTGCCACTCCACCTCCTGGCTGCACCGCGCTaGACAGATGAGGTCGGCGGT +
Preference number: 4 (lower is better)
Translates to: NHSHICDAGVGQQVPLHLLAAPR*TDEVGG
Trigger: ACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAG...GAGGTGGAGTGGCACCTGCTGGCCCACCCCAGCATCACAGATGTGGCTGTGATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542688.5
CDS-3UTR GCA 90 bp ACGAATGGAGGAGGCAGGAGCTGGGTCCATGGTCTCCCTGCCAGGGAAGCCGCAGGACACACAGTAGTGTaGAGGGTGGCAGGTGTCCCC +
Preference number: 4 (lower is better)
Translates to: TNGGGRSWVHGLPAREAAGHTVV*RVAGVP
Trigger: GGGGACACCTGCCACCCTGCACACTACTGTGTGTCC...TGCGGCTTCCCTGGCAGGGAGACCATGGACCCAGCTCCTGCCTCCTCCATTCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR GCA 90 bp GGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGGTTCAGGCCAGACACTaGTGGGCGATGACTGTTACT +
Preference number: 4 (lower is better)
Translates to: GLAAPRCTDEVGGDQAEVVQARH*WAMTVT
Trigger: AGTAACAGTCATCGCCCAGCAGTGTCTGGCCTGAAC...CACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp CTGGAAAACAGGGCTGGGACGCTGCTCTGTGGCCTCAGACAAGCTTGGTGGGCGATGGGGCTGGCCTCCTaGCCGGCACACTCGTTTCTG +
Preference number: 4 (lower is better)
Translates to: LENRAGTLLCGLRQAWWAMGLAS*PAHSFL
Trigger: CAGAAACGAGTGTGCCGGGCAGGAGGCCAGCCCCAT...CGCCCACCAAGCTTGTCTGAGGCCACAGAGCAGCGTCCCAGCCCTGTTTTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp ATGGGGCTGGCCTCCTGCCCGGCACACTCGTTTCTGGCCACTCTTTCAGACGTGGCTTGGTGGGCGACATaGTCAAGTGAGCAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: MGLASCPAHSFLATLSDVAWWAT*SSEQGP
Trigger: GGGCCCCTGCTCACTTGAGCATGTCGCCCACCAAGC...CACGTCTGAAAGAGTGGCCAGAAACGAGTGTGCCGGGCAGGAGGCCAGCCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp CCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGACACCAGGGACGACTGTAGTCTCTGACTaGCGTTCCCTTGGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: PRCTDEVGGDQAEVTPGTTVVSD*RSLGSR
Trigger: CCTGGACCCAAGGGAACGGCAGTCAGAGACTACAGT...CGTCCCTGGTGTCACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp ATGGGGCTGGCCTCCTGCCCGGCACACTCGTTTCTGGCCACTCTTTCAGACGTGGAATGGGGCGGCACCTaGCACAGGCTGTGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: MGLASCPAHSFLATLSDVEWGGT*HRLCVG
Trigger: TCCCACACACAGCCTGTGGCAGGTGCCGCCCCATTC...CACGTCTGAAAGAGTGGCCAGAAACGAGTGTGCCGGGCAGGAGGCCAGCCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR GCA 90 bp ACATGCTCAAGTGAGCAGGGGCCCCAGGCCACGTCCAACTGTCCGCGAGGCATGACTGGCTGGGGTCAGTaGACACCGCACAGAGTGACG +
Preference number: 4 (lower is better)
Translates to: TCSSEQGPQATSNCPRGMTGWGQ*TPHRVT
Trigger: CGTCACTCTGTGCGGTGTGCACTGACCCCAGCCAGT...CATGCCTCGCGGACAGTTGGACGTGGCCTGGGGCCCCTGCTCACTTGAGCATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR CCA 90 bp AGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGAAGGTGAGCACCACATaGGGCAGCATTGCACTGACA +
Preference number: 4 (lower is better)
Translates to: RGWLHRAAQMRSAVTRQRKVSTT*GSIALT
Trigger: TGTCAGTGCAATGCTGCCCCATGTGGTGCTCACCTT...CCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp CCCAGTCTGCCGGGTCATGAGGGGTGGAAGTGCCTGATGAGCGCCTTCTTGTCAGTCCGAGCGGGCCACTaGGGCTGTGTGCAGAAGACC +
Preference number: 4 (lower is better)
Translates to: PSLPGHEGWKCLMSAFLSVRAGH*GCVQKT
Trigger: GGTCTTCTGCACACAGCCCCAGTGGCCCGCTCGGAC...TGACAAGAAGGCGCTCATCAGGCACTTCCACCCCTCATGACCCGGCAGACTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542688.5
CDS-3UTR CCA 90 bp GCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGACACCAATGACATACTCCAGCTaGGCCGCGGGATGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: AAPRCTDEVGGDQAEVTPMTYSS*AAGCFL
Trigger: CAGGAAGCATCCCGCGGCCCAGCTGGAGTATGTCAT...TGGTGTCACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGATGACATACTCCAGCTaGGCCGCGGGATGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: GSRCEGDVCCSPPDPQSQMTYSS*AAGCFL
Trigger: CAGGAAGCATCCCGCGGCCCAGCTGGAGTATGTCAT...CTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACACCGAGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp AGCACCAGCTCCGAGGGCACCGCGTACGGGGCCAGGACATTTCTGGCCCACTCTCCAGGTACTCCTGGCTaGCAAGGACCACAGAGCTCT +
Preference number: 4 (lower is better)
Translates to: STSSEGTAYGARTFLAHSPGTPG*QGPQSS
Trigger: AGAGCTCTGTGGTCCTTGCCAGCCAGGAGTACCTGG...AGAGTGGGCCAGAAATGTCCTGGCCCCGTACGCGGTGCCCTCGGAGCTGGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542688.5
CDS-3UTR CCA 90 bp GGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGAGCTCCAGGTACTCCTaGCTGGCAAGGACCACAGAG +
Preference number: 4 (lower is better)
Translates to: GSRCEGDVCCSPPDPQSQSSRYS*LARTTE
Trigger: CTCTGTGGTCCTTGCCAGCCAGGAGTACCTGGAGCT...CTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACACCGAGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp TCCAAGAGCAGCACCAGGAAATGCACGGAACCCATGGGACAGGGCTGGTTCTGGCCTCCATCCCTGCTCTaGGACCGGGACCTCTGCCGG +
Preference number: 4 (lower is better)
Translates to: SKSSTRKCTEPMGQGWFWPPSLL*DRDLCR
Trigger: CCGGCAGAGGTCCCGGTCCCAGAGCAGGGATGGAGG...CCAGAACCAGCCCTGTCCCATGGGTTCCGTGCATTTCCTGGTGCTGCTCTTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GGAAATGCACGGAACCCATGGGACAGGGCTGGTTCTGGGAGGCTTGTGAACCCTCCTCCATCCCTGCTCTaGGACCGGGACCTCTGCCGG +
Preference number: 4 (lower is better)
Translates to: GNARNPWDRAGSGRLVNPPPSLL*DRDLCR
Trigger: CCGGCAGAGGTCCCGGTCCCAGAGCAGGGATGGAGG...AGGGTTCACAAGCCTCCCAGAACCAGCCCTGTCCCATGGGTTCCGTGCATTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp CAACACACCTTCCTGAGGTTTCTGCATCGGCCACGCCTGTGGGCTCCGGAGCTGCTGTACTCCAGGCAGTaGGGTCCCCACGGAACCTGG +
Preference number: 4 (lower is better)
Translates to: QHTFLRFLHRPRLWAPELLYSRQ*GPHGTW
Trigger: CCAGGTTCCGTGGGGACCCCACTGCCTGGAGTACAG...CAGCTCCGGAGCCCACAGGCGTGGCCGATGCAGAAACCTCAGGAAGGTGTGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317447.9
ENST00000614302.5
CDS-3UTR CCA 90 bp CTGACTGACACCTGGAGAGGGCTGCACAGCCACGGGGCGTCTCACTCCTCCACACTCCCTCTGCGTGGATaGTGTAGGAGCAGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: LTDTWRGLHSHGASHSSTLPLRG*CRSRLP
Trigger: GGGAAGCCTGCTCCTACACCATCCACGCAGAGGGAG...TGTGGAGGAGTGAGACGCCCCGTGGCTGTGCAGCCCTCTCCAGGTGTCAGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543676.1
CDS-3UTR CCA 90 bp GGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGCCTCGGATCCAGTACTaGCCATCCTTAAACACCACG +
Preference number: 4 (lower is better)
Translates to: GLAAPRCTDEVGGDQAEVPRIQY*PSLNTT
Trigger: CGTGGTGTTTAAGGATGGCCAGTACTGGATCCGAGG...CACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp AGCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTTCTTTGAGCTCCCTGTaGGACAGTGAGTGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: STWGQGLAAPRCTDEVGGSLSSL*DSECPS
Trigger: AGAAGGACACTCACTGTCCCACAGGGAGCTCAAAGA...ACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCTCAATCTTGCCCATCTaGTTCCGCGGGATCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GLGRAPVVLGVKGTSAAPSILPI*FRGISS
Trigger: GGAGGAGATCCCGCGGAACCAGATGGGCAAGATTGA...GGGAGCAGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp CTGGAAAACAGGGCTGGGACGCTGCTCTGTGGCCTCAGACAAGCTTGGTGGGCGCCGGGTCATGAGGGGTaGAAGTGCCTGATGAGCGCC +
Preference number: 4 (lower is better)
Translates to: LENRAGTLLCGLRQAWWAPGHEG*KCLMSA
Trigger: GGCGCTCATCAGGCACTTCCACCCCTCATGACCCGG...CGCCCACCAAGCTTGTCTGAGGCCACAGAGCAGCGTCCCAGCCCTGTTTTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp ACAGCCACATCTGTGATGCTGGGGTGGGCCAGCAGGTGCCACTCCACCTCCAGGCAACTGGCCCGAGGCTaGGGACCCCACATGGTGATT +
Preference number: 4 (lower is better)
Translates to: TATSVMLGWASRCHSTSRQLARG*GPHMVI
Trigger: AATCACCATGTGGGGTCCCCAGCCTCGGGCCAGTTG...CCTGGAGGTGGAGTGGCACCTGCTGGCCCACCCCAGCATCACAGATGTGGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542688.5
CDS-3UTR CCA 90 bp CTGACTGTTCCCGGGGTCAGGCCATGGGGATGCACAAGGCCACACCGTGAGGCACAACTGGCCCGAGGCTaGGGACCCCACATGGTGATT +
Preference number: 4 (lower is better)
Translates to: LTVPGVRPWGCTRPHREAQLARG*GPHMVI
Trigger: AATCACCATGTGGGGTCCCCAGCCTCGGGCCAGTTG...TGCCTCACGGTGTGGCCTTGTGCATCCCCATGGCCTGACCCCGGGAACAGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp CAACACACCTTCCTGAGGTTTCTGCATCGGCCACGCCTGTGGGCTCCGGAGCTGCTCTGGGACCTGCCCTaGAGAGCCTGGCAACTGCAG +
Preference number: 4 (lower is better)
Translates to: QHTFLRFLHRPRLWAPELLWDLP*RAWQLQ
Trigger: CTGCAGTTGCCAGGCTCTCCAGGGCAGGTCCCAGAG...CAGCTCCGGAGCCCACAGGCGTGGCCGATGCAGAAACCTCAGGAAGGTGTGTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp AGGCCAGGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTTTTGTGGGAAACCTCTaGGACCTGCCCTGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: RPGLGRAPVVLGVKGTSAFVGNL*DLPWRA
Trigger: GGCTCTCCAGGGCAGGTCCCAGAGGTTTCCCACAAA...AGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACCTGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp CTGACTGTTCCCGGGGTCAGGCCATGGGGATGCACAAGGCCACACCGTGAGGCAGGTGTGGAGATGACCTaGAAAGTCCCTGCGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LTVPGVRPWGCTRPHREAGVEMT*KVPALG
Trigger: CCCCAGCGCAGGGACTTTCCAGGTCATCTCCACACC...TGCCTCACGGTGTGGCCTTGTGCATCCCCATGGCCTGACCCCGGGAACAGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GGCCAGACACTGCTGGGCGATGACTGTTACTTCCCCCAGGCTGTGGGGAGGAGGGCCACAGACATGAAATaGGGGCCATGGGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: GQTLLGDDCYFPQAVGRRATDMK*GPWGRW
Trigger: CCACCTGCCCCATGGCCCCCATTTCATGTCTGTGGC...CCTCCTCCCCACAGCCTGGGGGAAGTAACAGTCATCGCCCAGCAGTGTCTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp ACATGCTCAAGTGAGCAGGGGCCCCAGGCCACGTCCAACTGTCCGCGAGGCATGGCCACAGACATGAAATaGGGGCCATGGGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: TCSSEQGPQATSNCPRGMATDMK*GPWGRW
Trigger: CCACCTGCCCCATGGCCCCCATTTCATGTCTGTGGC...CATGCCTCGCGGACAGTTGGACGTGGCCTGGGGCCCCTGCTCACTTGAGCATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp TCCGGGGGCAGAATGTTCTGGGTAAGTTCAGGCCAGACACTGCTGGGCGATGACCATCGGCCACGCCTGTaGGCTCCGGAGCTGGGTCTG +
Preference number: 4 (lower is better)
Translates to: SGGRMFWVSSGQTLLGDDHRPRL*APELGL
Trigger: CAGACCCAGCTCCGGAGCCCACAGGCGTGGCCGATG...GTCATCGCCCAGCAGTGTCTGGCCTGAACTTACCCAGAACATTCTGCCCCCGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GGCCAGACACTGCTGGGCGATGACTGTTACTTCCCCCAGGCTGTGGGGAGGAGGACTTCCCCCAGGCTGTaGGGAGGAGGCAGCCTATTC +
Preference number: 4 (lower is better)
Translates to: GQTLLGDDCYFPQAVGRRTSPRL*GGGSLF
Trigger: GAATAGGCTGCCTCCTCCCCACAGCCTGGGGGAAGT...CCTCCTCCCCACAGCCTGGGGGAAGTAACAGTCATCGCCCAGCAGTGTCTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGCTCAGACAAGCTTGGTaGGCGACATGCTCAAGTGAG +
Preference number: 4 (lower is better)
Translates to: GLAAPRCTDEVGGDQAEVLRQAW*ATCSSE
Trigger: CTCACTTGAGCATGTCGCCCACCAAGCTTGTCTGAG...CACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp AGCAGCACCAGGAAATGCACGGAACCCATGGGACAGGGCTGGTTCTGGGAGGCTCCCGGGGTCAGGCCATaGGGATGCACAAGGCCACAC +
Preference number: 4 (lower is better)
Translates to: SSTRKCTEPMGQGWFWEAPGVRP*GCTRPH
Trigger: GTGTGGCCTTGTGCATCCCCATGGCCTGACCCCGGG...AGCCTCCCAGAACCAGCCCTGTCCCATGGGTTCCGTGCATTTCCTGGTGCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp TGGACACACAGTAGTGTGCAGGGTGGCAGGTGTCCCCACAGTGGGAGCTGCTCTCCCGGGGTCAGGCCATaGGGATGCACAAGGCCACAC +
Preference number: 4 (lower is better)
Translates to: WTHSSVQGGRCPHSGSCSPGVRP*GCTRPH
Trigger: GTGTGGCCTTGTGCATCCCCATGGCCTGACCCCGGG...AGAGCAGCTCCCACTGTGGGGACACCTGCCACCCTGCACACTACTGTGTGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GACTGCCGTTCCCTTGGGTCCAGGCCTCTGGCGGGAGGGCGGGACCCCTTCCTCGCTTTCTGTAGTTTGTaGTCAACGAGCTCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: DCRSLGSRPLAGGRDPFLAFCSL*STSSRL
Trigger: GAGCCTGGAGCTCGTTGACCACAAACTACAGAAAGC...GAGGAAGGGGTCCCGCCCTCCCGCCAGAGGCCTGGACCCAAGGGAACGGCAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GCCAGGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCTTCTGGTCAACCGGCTaGTCAACGAGCTCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: ARSWTGPRGSRCEGDVCCFWSTG*STSSRL
Trigger: AAGCCTGGAGCTCGTTGACCAGCCGGTTGACCAGAA...GCAGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp TGGACACACAGTAGTGTGCAGGGTGGCAGGTGTCCCCACAGTGGGAGCTGCTCTAACCAGGGGCCTGGCTaGGCACTGGCGGACTGTGTG +
Preference number: 4 (lower is better)
Translates to: WTHSSVQGGRCPHSGSCSNQGPG*ALADCV
Trigger: CACACAGTCCGCCAGTGCCCAGCCAGGCCCCTGGTT...AGAGCAGCTCCCACTGTGGGGACACCTGCCACCCTGCACACTACTGTGTGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp AACGTCTGGACTGTAGTCTCTGACTGCCGTTCCCTTGGGTCCAGGCCTCTGGCGAACCAGGGGCCTGGCTaGGCACTGGCGGACTGTGTG +
Preference number: 4 (lower is better)
Translates to: NVWTVVSDCRSLGSRPLANQGPG*ALADCV
Trigger: CACACAGTCCGCCAGTGCCCAGCCAGGCCCCTGGTT...CGCCAGAGGCCTGGACCCAAGGGAACGGCAGTCAGAGACTACAGTCCAGACGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp ACACCTGGAGAGGGCTGCACAGCCACGGGGCGTCTCACTCCTCCACACGCCACTCAGGAACCTGAGATGTaGGGTGTGGCCAGCAGCCTA +
Preference number: 4 (lower is better)
Translates to: TPGEGCTATGRLTPPHATQEPEM*GVASSL
Trigger: TAGGCTGCTGGCCACACCCCACATCTCAGGTTCCTG...AGTGGCGTGTGGAGGAGTGAGACGCCCCGTGGCTGTGCAGCCCTCTCCAGGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543676.1
CDS-3UTR CCA 90 bp GCCCCGTCCCTGCAGACAGGGTTGGAACTGGCTGAGCTGGGAGGTCCTCGAGTTCCCTGCAGACAGGGTTaGAACTGGCTGAGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: APSLQTGLELAELGGPRVPCRQG*NWLSWE
Trigger: CTCCCAGCTCAGCCAGTTCCAACCCTGTCTGCAGGG...AACTCGAGGACCTCCCAGCTCAGCCAGTTCCAACCCTGTCTGCAGGGACGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543676.1
CDS-3UTR CCA 90 bp CAGCCACGGGGCGTCTCACTCCTCCACACGCCACTCACGTTCTGCTCTCTGCTGCAGCTGACTGACACCTaGAGAGGGCTGCACAGCCAC +
Preference number: 4 (lower is better)
Translates to: QPRGVSLLHTPLTFCSLLQLTDT*RGLHSH
Trigger: GTGGCTGTGCAGCCCTCTCCAGGTGTCAGTCAGCTG...CAGCAGAGAGCAGAACGTGAGTGGCGTGTGGAGGAGTGAGACGCCCCGTGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543676.1
CDS-3UTR CCA 90 bp ACGAATGGAGGAGGCAGGAGCTGGGTCCATGGTCTCCCTGCCAGGGAAGCCGCACAGCACCCCTGTGTCTaGCTGGGGTCAGAACTGGTG +
Preference number: 4 (lower is better)
Translates to: TNGGGRSWVHGLPAREAAQHPCV*LGSELV
Trigger: CACCAGTTCTGACCCCAGCCAGACACAGGGGTGCTG...TGCGGCTTCCCTGGCAGGGAGACCATGGACCCAGCTCCTGCCTCCTCCATTCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR CCA 90 bp GGCCAGACACTGCTGGGCGATGACTGTTACTTCCCCCAGGCTGTGGGGAGGAGGTGTTGGGTGGGAACGTaGGGCCAGCTTGGCACTCCT +
Preference number: 4 (lower is better)
Translates to: GQTLLGDDCYFPQAVGRRCWVGT*GQLGTP
Trigger: AGGAGTGCCAAGCTGGCCCCACGTTCCCACCCAACA...CCTCCTCCCCACAGCCTGGGGGAAGTAACAGTCATCGCCCAGCAGTGTCTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR CCA 90 bp GCCGCTGGGACAGAGTCCAGGTGGGAGGGCAGTGTGTGGTGTGTGTGTGGCCAGTCAGGTCTTGTGTGTTaGGCCTGGACACCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: AAGTESRWEGSVWCVCGQSGLVC*AWTPGR
Trigger: CCTGCCAGGTGTCCAGGCCCAACACACAAGACCTGA...CTGGCCACACACACACCACACACTGCCCTCCCACCTGGACTCTGTCCCAGCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR TCA 90 bp ACAACTGGCCCGAGGCTGGGGACCCCACATGGTGATTTCATCCCAAACAGTTCTAGGCCAGGGCACGGGTaGACACCGGGGCGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: TTGPRLGTPHGDFIPNSSRPGHG*TPGRSC
Trigger: ACAGGAGCGCCCCGGTGTTCACCCGTGCCCTGGCCT...AGAACTGTTTGGGATGAAATCACCATGTGGGGTCCCCAGCCTCGGGCCAGTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp GGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGTCCCACTGGTGTAGATaGTCATGGCGCCCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: GSRCEGDVCCSPPDPQSQSHWCR*SWRPCS
Trigger: GGAACAAGGGCGCCATGATCATCTACACCAGTGGGA...CTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACACCGAGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp CCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGACACCAGGGACGAAACCTGCTGAGGGCTaGACTCAGGCATCATCACAC +
Preference number: 4 (lower is better)
Translates to: PRCTDEVGGDQAEVTPGTKPAEG*TQASSH
Trigger: GTGTGATGATGCCTGAGTTCAGCCCTCAGCAGGTTT...CGTCCCTGGTGTCACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp TGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGTCTGCCGGGTTTTCCCAAACCTGCTaGGGGCTGAACTCAGGCATC +
Preference number: 4 (lower is better)
Translates to: CEGDVCCSPPDPQSQSAGFSQTC*GLNSGI
Trigger: GATGCCTGAGTTCAGCCCTCAGCAGGTTTGGGAAAA...CCCGGCAGACTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp GCCAGGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCCCTCTGTGGGTTTTCTaGGACAATGCGCACCTGTAC +
Preference number: 4 (lower is better)
Translates to: ARSWTGPRGSRCEGDVCCPLWVF*DNAHLY
Trigger: GTACAGGTGCGCATTGTCTCAGAAAACCCACAGAGG...GCAGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp CTGGAAAACAGGGCTGGGACGCTGCTCTGTGGCCTCAGACAAGCTTGGTGGGCGTCACAGCCACATCTGTaGTGCTGGGGTGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: LENRAGTLLCGLRQAWWASQPHL*CWGGPA
Trigger: TGCTGGCCCACCCCAGCATCACAGATGTGGCTGTGA...CGCCCACCAAGCTTGTCTGAGGCCACAGAGCAGCGTCCCAGCCCTGTTTTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp TGGACACACAGTAGTGTGCAGGGTGGCAGGTGTCCCCACAGTGGGAGCTGCTCTCAGGGACGGTCTCCTTaGGCTGCAACAACTGGCCCG +
Preference number: 4 (lower is better)
Translates to: WTHSSVQGGRCPHSGSCSQGRSP*AATTGP
Trigger: CGGGCCAGTTGTTGCAGCTCAAGGAGACCGTCCCTG...AGAGCAGCTCCCACTGTGGGGACACCTGCCACCCTGCACACTACTGTGTGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp CTGGCCTCCTGCCCGGCACACTCGTTTCTGGCCACTCTTTCAGACGTGCATTCCGTGACCAGGCAGAGGTaGCACCAGGGACGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: LASCPAHSFLATLSDVHSVTRQR*HQGRSP
Trigger: AGGAGACCGTCCCTGGTGTCACCTCTGCCTGGTCAC...GGAATGCACGTCTGAAAGAGTGGCCAGAAACGAGTGTGCCGGGCAGGAGGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp CTGGAAAACAGGGCTGGGACGCTGCTCTGTGGCCTCAGACAAGCTTGGTGGGCGGTTCTGGGAGGCTTGTaGACCCTCAGCTCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: LENRAGTLLCGLRQAWWAVLGGL*TLSSSQ
Trigger: CTGGGAGGAGCTGAGGGTTCACAAGCCTCCCAGAAC...CGCCCACCAAGCTTGTCTGAGGCCACAGAGCAGCGTCCCAGCCCTGTTTTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp GACTGCCGTTCCCTTGGGTCCAGGCCTCTGGCGGGAGGGCGGGACCCCTTCCTCTTCTGTGACACATGCTaGTGGACACACAGTAGTGTG +
Preference number: 4 (lower is better)
Translates to: DCRSLGSRPLAGGRDPFLFCDTC*WTHSSV
Trigger: CACACTACTGTGTGTCCATCAGCATGTGTCACAGAA...GAGGAAGGGGTCCCGCCCTCCCGCCAGAGGCCTGGACCCAAGGGAACGGCAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp AACGTCTGGACTGTAGTCTCTGACTGCCGTTCCCTTGGGTCCAGGCCTCTGGCGGGGCTGGTGTGGAGATaGCCTGGAAAGTCCCTGCGC +
Preference number: 4 (lower is better)
Translates to: NVWTVVSDCRSLGSRPLAGLVWR*PGKSLR
Trigger: GCGCAGGGACTTTCCAGGTCATCTCCACACCAGCCC...CGCCAGAGGCCTGGACCCAAGGGAACGGCAGTCAGAGACTACAGTCCAGACGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp GGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGCACAACACACCTTCCTaGGGTTTCTGCATCGGCCAC +
Preference number: 4 (lower is better)
Translates to: GSRCEGDVCCSPPDPQSQHNTPS*GFCIGH
Trigger: GTGGCCGATGCAGAAACCTCAGGAAGGTGTGTTGTG...CTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACACCGAGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp CATTCCGGGGGCAGAATGTTCTGGGTAAGTTCAGGCCAGACACTGCTGGGCGATGGCGACATGCTCAAGTaGGCAGGGGCCCCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: HSGGRMFWVSSGQTLLGDGDMLK*AGAPGH
Trigger: GTGGCCTGGGGCCCCTGCTCACTTGAGCATGTCGCC...ATCGCCCAGCAGTGTCTGGCCTGAACTTACCCAGAACATTCTGCCCCCGGAATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp GGAAATGCACGGAACCCATGGGACAGGGCTGGTTCTGGGAGGCTTGTGAACCCTCACAAGGCCACACCGTaGGGCAGGAGTTCGGGTGGG +
Preference number: 4 (lower is better)
Translates to: GNARNPWDRAGSGRLVNPHKATP*GRSSGG
Trigger: CCCACCCGAACTCCTGCCTCACGGTGTGGCCTTGTG...AGGGTTCACAAGCCTCCCAGAACCAGCCCTGTCCCATGGGTTCCGTGCATTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp GACCAGCTGGTCACCAGGAGTCCTGCCATCCCCTGGTGCCTGAGAGAAGCTGGGCTGGACTGTAGTCTCTaGCTGCCGTTCCCTTGGGTC +
Preference number: 4 (lower is better)
Translates to: DQLVTRSPAIPWCLREAGLDCSL*LPFPWV
Trigger: GACCCAAGGGAACGGCAGTCAGAGACTACAGTCCAG...CCCAGCTTCTCTCAGGCACCAGGGGATGGCAGGACTCCTGGTGACCAGCTGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR TCA 90 bp TCCGGGGGCAGAATGTTCTGGGTAAGTTCAGGCCAGACACTGCTGGGCGATGACGGAGGGAGGAGAGGATaGGTTCCCTCCAGGACGGGC +
Preference number: 4 (lower is better)
Translates to: SGGRMFWVSSGQTLLGDDGGRRG*VPSRTG
Trigger: GCCCGTCCTGGAGGGAACTCATCCTCTCCTCCCTCC...GTCATCGCCCAGCAGTGTCTGGCCTGAACTTACCCAGAACATTCTGCCCCCGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp GGAAATGCACGGAACCCATGGGACAGGGCTGGTTCTGGGAGGCTTGTGAACCCTGGAGGGAGGAGAGGATaGGTTCCCTCCAGGACGGGC +
Preference number: 4 (lower is better)
Translates to: GNARNPWDRAGSGRLVNPGGRRG*VPSRTG
Trigger: GCCCGTCCTGGAGGGAACTCATCCTCTCCTCCCTCC...AGGGTTCACAAGCCTCCCAGAACCAGCCCTGTCCCATGGGTTCCGTGCATTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp GGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGTGGGGTCAGAACTGGTaGCTTTCCAGATTCAAGCCA +
Preference number: 4 (lower is better)
Translates to: GLAAPRCTDEVGGDQAEVWGQNW*LSRFKP
Trigger: TGGCTTGAATCTGGAAAGTCACCAGTTCTGACCCCA...CACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR GCA 90 bp CTGGAAAACAGGGCTGGGACGCTGCTCTGTGGCCTCAGACAAGCTTGGTGGGCGCCACGGGGCAGGATCTaGCTCGCCACAACTCTTCCT +
Preference number: 4 (lower is better)
Translates to: LENRAGTLLCGLRQAWWAPRGRI*LATTLP
Trigger: AGGAAGAGTTGTGGCGAGGCAGATCCTGCCCCGTGG...CGCCCACCAAGCTTGTCTGAGGCCACAGAGCAGCGTCCCAGCCCTGTTTTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317447.9
ENST00000614302.5
CDS-3UTR GCA 90 bp AGTGAGTGTCCTTCTCGGAGGGTCACCACAGCAGTGACCCGCTGGCCCCATGTCTACGTGTGGCGGCCGTaGTGGTCAACCAGGGCGATT +
Preference number: 4 (lower is better)
Translates to: SECPSRRVTTAVTRWPHVYVWRP*WSTRAI
Trigger: AATCGCCCTGGTTGACCAGCACGGCCGCCACACGTA...GACATGGGGCCAGCGGGTCACTGCTGTGGTGACCCTCCGAGAAGGACACTCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542688.5
CDS-3UTR GCA 90 bp CCCAGTCTGCCGGGTCATGAGGGGTGGAAGTGCCTGATGAGCGCCTTCTTGTCACACACCCGCAGAGCCTaGAGATCTCCTGGGACAGGC +
Preference number: 4 (lower is better)
Translates to: PSLPGHEGWKCLMSAFLSHTRRA*RSPGTG
Trigger: GCCTGTCCCAGGAGATCTGCAGGCTCTGCGGGTGTG...TGACAAGAAGGCGCTCATCAGGCACTTCCACCCCTCATGACCCGGCAGACTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542688.5
CDS-3UTR GCA 90 bp CCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTTGCCGGTTCCTCTACTaGTCCAGTGTAGATGGCTGG +
Preference number: 4 (lower is better)
Translates to: PVVLGVKGTSAAPHQTRSCRFLY*SSVDGW
Trigger: CCAGCCATCTACACTGGAGCAGTAGAGGAACCGGCA...ACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACACCGAGAACCACGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp AGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGGGTTTTCTGAGACAATaGGCACCTGTACTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: RGWLHRAAQMRSAVTRQRGFLRQ*APVLQA
Trigger: TGCCTGGAGTACAGGTGCGCATTGTCTCAGAAAACC...CCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp CAGCCACGGGGCGTCTCACTCCTCCACACGCCACTCACGTTCTGCTCTCTGCTGCCTCTCGTCTCCCTCTaGGTGGATGGTGTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: QPRGVSLLHTPLTFCSLLPLVSL*VDGVGA
Trigger: TGCTCCTACACCATCCACGCAGAGGGAGACGAGAGG...CAGCAGAGAGCAGAACGTGAGTGGCGTGTGGAGGAGTGAGACGCCCCGTGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543676.1
CDS-3UTR GCA 90 bp AGCACGTGGGGCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGCCATCCAGGGTGAATaGACTCTTAGTTTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: STWGQGLAAPRCTDEVGGAIQGE*TLSFFW
Trigger: CCAGAAGAAACTAAGAGTGCATTCACCCTGGATGGC...ACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp GACTGCCGTTCCCTTGGGTCCAGGCCTCTGGCGGGAGGGCGGGACCCCTTCCTCGCCATCCAGGGTGAATaGACTCTTAGTTTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: DCRSLGSRPLAGGRDPFLAIQGE*TLSFFW
Trigger: CCAGAAGAAACTAAGAGTGCATTCACCCTGGATGGC...GAGGAAGGGGTCCCGCCCTCCCGCCAGAGGCCTGGACCCAAGGGAACGGCAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp GGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGCATGAGGGGTGGAAGTaGCTGATGAGCGCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: GSRCEGDVCCSPPDPQSQHEGWK*LMSAFL
Trigger: CAAGAAGGCGCTCATCAGGCACTTCCACCCCTCATG...CTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACACCGAGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp CTGGCCTCCTGCCCGGCACACTCGTTTCTGGCCACTCTTTCAGACGTGCATTCCTGTGAAGGGGACGTCTaGTGCTCCCCACCAGACCCG +
Preference number: 4 (lower is better)
Translates to: LASCPAHSFLATLSDVHSCEGDV*CSPPDP
Trigger: CGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACA...GGAATGCACGTCTGAAAGAGTGGCCAGAAACGAGTGTGCCGGGCAGGAGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp CCCAGTCTGCCGGGTCATGAGGGGTGGAAGTGCCTGATGAGCGCCTTCTTGTCATGTGAAGGGGACGTCTaGTGCTCCCCACCAGACCCG +
Preference number: 4 (lower is better)
Translates to: PSLPGHEGWKCLMSAFLSCEGDV*CSPPDP
Trigger: CGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACA...TGACAAGAAGGCGCTCATCAGGCACTTCCACCCCTCATGACCCGGCAGACTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542688.5
CDS-3UTR GCA 90 bp AACGTCTGGACTGTAGTCTCTGACTGCCGTTCCCTTGGGTCCAGGCCTCTGGCGCACTGGCGGACTGTGTaGACGAAGGCCGACCAGCCT +
Preference number: 4 (lower is better)
Translates to: NVWTVVSDCRSLGSRPLAHWRTV*TKADQP
Trigger: AGGCTGGTCGGCCTTCGTGCACACAGTCCGCCAGTG...CGCCAGAGGCCTGGACCCAAGGGAACGGCAGTCAGAGACTACAGTCCAGACGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp AAACGAATGGAGGAGGCAGGAGCTGGGTCCATGGTCTCCCTGCCAGGGAAGCCGTTGGCACTCCTGAGCTaGCTCAGGCCTGGCCTGTCT +
Preference number: 4 (lower is better)
Translates to: KRMEEAGAGSMVSLPGKPLALLS*LRPGLS
Trigger: AGACAGGCCAGGCCTGAGGCAGCTCAGGAGTGCCAA...CGGCTTCCCTGGCAGGGAGACCATGGACCCAGCTCCTGCCTCCTCCATTCGTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR CCA 90 bp ACAACTGGCCCGAGGCTGGGGACCCCACATGGTGATTTCATCCCAAACAGTTCTCACCAGGCCTGGCGCTaGAACCCGGAAGGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: TTGPRLGTPHGDFIPNSSHQAWR*NPEGRW
Trigger: CCACCGGCCTTCCGGGTTCCAGCGCCAGGCCTGGTG...AGAACTGTTTGGGATGAAATCACCATGTGGGGTCCCCAGCCTCGGGCCAGTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317447.9
ENST00000614302.5
CDS-3UTR CCA 90 bp CCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGACACCAGGGACGAAGGTGAGCACCACATaGGGCAGCATTGCACTGACA +
Preference number: 4 (lower is better)
Translates to: PRCTDEVGGDQAEVTPGTKVSTT*GSIALT
Trigger: TGTCAGTGCAATGCTGCCCCATGTGGTGCTCACCTT...CGTCCCTGGTGTCACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp AACGTCTGGACTGTAGTCTCTGACTGCCGTTCCCTTGGGTCCAGGCCTCTGGCGAGCCTGCAGATCTCCTaGGACAGGCGAAGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: NVWTVVSDCRSLGSRPLASLQIS*DRRRLR
Trigger: CCGCAGCCTTCGCCTGTCCCAGGAGATCTGCAGGCT...CGCCAGAGGCCTGGACCCAAGGGAACGGCAGTCAGAGACTACAGTCCAGACGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp CTGACTGTTCCCGGGGTCAGGCCATGGGGATGCACAAGGCCACACCGTGAGGCAATGACATACTCCAGCTaGGCCGCGGGATGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: LTVPGVRPWGCTRPHREAMTYSS*AAGCFL
Trigger: CAGGAAGCATCCCGCGGCCCAGCTGGAGTATGTCAT...TGCCTCACGGTGTGGCCTTGTGCATCCCCATGGCCTGACCCCGGGAACAGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp ACGAATGGAGGAGGCAGGAGCTGGGTCCATGGTCTCCCTGCCAGGGAAGCCGCAATGACATACTCCAGCTaGGCCGCGGGATGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: TNGGGRSWVHGLPAREAAMTYSS*AAGCFL
Trigger: CAGGAAGCATCCCGCGGCCCAGCTGGAGTATGTCAT...TGCGGCTTCCCTGGCAGGGAGACCATGGACCCAGCTCCTGCCTCCTCCATTCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR CCA 90 bp AGGGCCGTGGACTGGGGCACCCACCAGTCCTGGAAAACAGGGCTGGGACGCTGCAGGACCACAGAGCTCTaGGAGTCGCAGATGACATAC +
Preference number: 4 (lower is better)
Translates to: RAVDWGTHQSWKTGLGRCRTTEL*ESQMTY
Trigger: GTATGTCATCTGCGACTCCCAGAGCTCTGTGGTCCT...GCAGCGTCCCAGCCCTGTTTTCCAGGACTGGTGGGTGCCCCAGTCCACGGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp AGCTCCGAGGGCACCGCGTACGGGGCCAGGACATTTCTGGCCCACTCTTTGAGCAGCTCCAGGTACTCCTaGCTGGCAAGGACCACAGAG +
Preference number: 4 (lower is better)
Translates to: SSEGTAYGARTFLAHSLSSSRYS*LARTTE
Trigger: CTCTGTGGTCCTTGCCAGCCAGGAGTACCTGGAGCT...GCTCAAAGAGTGGGCCAGAAATGTCCTGGCCCCGTACGCGGTGCCCTCGGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542688.5
CDS-3UTR CCA 90 bp GTCACCACAGCAGTGACCCGCTGGCCCCATGTCATATCCGGAACTCCAATCACATGCTCAGCACGCCCTTaGGCCTCCCCGTGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: VTTAVTRWPHVISGTPITCSARP*ASPWSH
Trigger: GTGGGACCACGGGGAGGCCCAAGGGCGTGCTGAGCA...TGTGATTGGAGTTCCGGATATGACATGGGGCCAGCGGGTCACTGCTGTGGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542688.5
CDS-3UTR CCA 90 bp TGGACACACAGTAGTGTGCAGGGTGGCAGGTGTCCCCACAGTGGGAGCTGCTCTACCACACCATGGACGTaGTGCAGCGGGAGCACGTGG +
Preference number: 4 (lower is better)
Translates to: WTHSSVQGGRCPHSGSCSTTPWT*CSGSTW
Trigger: CCACGTGCTCCCGCTGCACCACGTCCATGGTGTGGT...AGAGCAGCTCCCACTGTGGGGACACCTGCCACCCTGCACACTACTGTGTGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GAGTGTCCTTCTCGGAGGGTCACCACAGCAGTGACCCGCTGGCCCCATGTCATAGCGTTGACCACACCATaGACGTGGTGCAGCGGGAGC +
Preference number: 4 (lower is better)
Translates to: ECPSRRVTTAVTRWPHVIALTTP*TWCSGS
Trigger: GCTCCCGCTGCACCACGTCCATGGTGTGGTCAACGC...TATGACATGGGGCCAGCGGGTCACTGCTGTGGTGACCCTCCGAGAAGGACACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542688.5
CDS-3UTR CCA 90 bp GGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGGCACGCAAGAAATCCTaGGCGTGCGGCTGGGTAAAA +
Preference number: 4 (lower is better)
Translates to: GSRCEGDVCCSPPDPQSQARKKS*ACGWVK
Trigger: TTTTACCCAGCCGCACGCCCAGGATTTCTTGCGTGC...CTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACACCGAGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp AGCACCAGCTCCGAGGGCACCGCGTACGGGGCCAGGACATTTCTGGCCCACTCTGCACGCAAGAAATCCTaGGCGTGCGGCTGGGTAAAA +
Preference number: 4 (lower is better)
Translates to: STSSEGTAYGARTFLAHSARKKS*ACGWVK
Trigger: TTTTACCCAGCCGCACGCCCAGGATTTCTTGCGTGC...AGAGTGGGCCAGAAATGTCCTGGCCCCGTACGCGGTGCCCTCGGAGCTGGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542688.5
CDS-3UTR CCA 90 bp ATAAACTGGGCTTTAATGGGGAGGGAGGAGAGGATGAGTTCCCTCCAGGACGGGGCAGGCGCACGGCAGTaGTCAGGGGCCCGGACAGAG +
Preference number: 4 (lower is better)
Translates to: INWALMGREERMSSLQDGAGARQ*SGARTE
Trigger: CTCTGTCCGGGCCCCTGACCACTGCCGTGCGCCTGC...CCCGTCCTGGAGGGAACTCATCCTCTCCTCCCTCCCCATTAAAGCCCAGTTTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp ACAACTGGCCCGAGGCTGGGGACCCCACATGGTGATTTCATCCCAAACAGTTCTGCAGGCGCACGGCAGTaGTCAGGGGCCCGGACAGAG +
Preference number: 4 (lower is better)
Translates to: TTGPRLGTPHGDFIPNSSAGARQ*SGARTE
Trigger: CTCTGTCCGGGCCCCTGACCACTGCCGTGCGCCTGC...AGAACTGTTTGGGATGAAATCACCATGTGGGGTCCCCAGCCTCGGGCCAGTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp CTGGCAACATTTCTGCCATTTCCGGCAGAGCAGGTGCTCAGAGGCAGGAGTGTCGGTCCCCACGGAACCTaGCAGGCGCACGGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: LATFLPFPAEQVLRGRSVGPHGT*QAHGSG
Trigger: ACCACTGCCGTGCGCCTGCCAGGTTCCGTGGGGACC...GACACTCCTGCCTCTGAGCACCTGCTCTGCCGGAAATGGCAGAAATGTTGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543676.1
CDS-3UTR CCA 90 bp CTGGAAAACAGGGCTGGGACGCTGCTCTGTGGCCTCAGACAAGCTTGGTGGGCGCTCCCTCTGCGTGGATaGTGTAGGAGCAGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: LENRAGTLLCGLRQAWWALPLRG*CRSRLP
Trigger: GGGAAGCCTGCTCCTACACCATCCACGCAGAGGGAG...CGCCCACCAAGCTTGTCTGAGGCCACAGAGCAGCGTCCCAGCCCTGTTTTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp TGGACACACAGTAGTGTGCAGGGTGGCAGGTGTCCCCACAGTGGGAGCTGCTCTACCCTGGGGTCACCTTaGTCCCCCTCTCGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: WTHSSVQGGRCPHSGSCSTLGSP*SPSRLP
Trigger: AGGGAGACGAGAGGGGGACCAAGGTGACCCCAGGGT...AGAGCAGCTCCCACTGTGGGGACACCTGCCACCCTGCACACTACTGTGTGTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp AGGGCCGTGGACTGGGGCACCCACCAGTCCTGGAAAACAGGGCTGGGACGCTGCCTTTTCTTCAAACCCTaGGGTCACCTTGGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: RAVDWGTHQSWKTGLGRCLFFKP*GHLGPP
Trigger: AGGGGGACCAAGGTGACCCCAGGGTTTGAAGAAAAG...GCAGCGTCCCAGCCCTGTTTTCCAGGACTGGTGGGTGCCCCAGTCCACGGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp AGGGCCGTGGACTGGGGCACCCACCAGTCCTGGAAAACAGGGCTGGGACGCTGCCCTCGGATCCAGTACTaGCCATCCTTAAACACCACG +
Preference number: 4 (lower is better)
Translates to: RAVDWGTHQSWKTGLGRCPRIQY*PSLNTT
Trigger: CGTGGTGTTTAAGGATGGCCAGTACTGGATCCGAGG...GCAGCGTCCCAGCCCTGTTTTCCAGGACTGGTGGGTGCCCCAGTCCACGGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp AACGTCTGGACTGTAGTCTCTGACTGCCGTTCCCTTGGGTCCAGGCCTCTGGCGTCTGTGATGCTGGGGTaGGCCAGCAGGTGCCACTCC +
Preference number: 4 (lower is better)
Translates to: NVWTVVSDCRSLGSRPLASVMLG*ASRCHS
Trigger: GGAGTGGCACCTGCTGGCCCACCCCAGCATCACAGA...CGCCAGAGGCCTGGACCCAAGGGAACGGCAGTCAGAGACTACAGTCCAGACGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp CCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTTCAATCTTGCCCATCTaGTTCCGCGGGATCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PVVLGVKGTSAAPHQTRSSILPI*FRGISS
Trigger: GGAGGAGATCCCGCGGAACCAGATGGGCAAGATTGA...ACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACACCGAGAACCACGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp AACGTCTGGACTGTAGTCTCTGACTGCCGTTCCCTTGGGTCCAGGCCTCTGGCGCTGCCCTGGAGAGCCTaGCAACTGCAGGGCACTGTG +
Preference number: 4 (lower is better)
Translates to: NVWTVVSDCRSLGSRPLALPWRA*QLQGTV
Trigger: CACAGTGCCCTGCAGTTGCCAGGCTCTCCAGGGCAG...CGCCAGAGGCCTGGACCCAAGGGAACGGCAGTCAGAGACTACAGTCCAGACGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp CCCAGTCTGCCGGGTCATGAGGGGTGGAAGTGCCTGATGAGCGCCTTCTTGTCACTGCCCTGGAGAGCCTaGCAACTGCAGGGCACTGTG +
Preference number: 4 (lower is better)
Translates to: PSLPGHEGWKCLMSAFLSLPWRA*QLQGTV
Trigger: CACAGTGCCCTGCAGTTGCCAGGCTCTCCAGGGCAG...TGACAAGAAGGCGCTCATCAGGCACTTCCACCCCTCATGACCCGGCAGACTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542688.5
CDS-3UTR CCA 90 bp CAACACACCTTCCTGAGGTTTCTGCATCGGCCACGCCTGTGGGCTCCGGAGCTGCACGTGCAGACGGCGTaGGACAGGGGCTTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: QHTFLRFLHRPRLWAPELHVQTA*DRGLFP
Trigger: AGGAAACAAGCCCCTGTCCCACGCCGTCTGCACGTG...CAGCTCCGGAGCCCACAGGCGTGGCCGATGCAGAAACCTCAGGAAGGTGTGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp CTGGAAAACAGGGCTGGGACGCTGCTCTGTGGCCTCAGACAAGCTTGGTGGGCGCACCGGCTGAGGGGCTaGTGTGGAGATGACCTGGAA +
Preference number: 4 (lower is better)
Translates to: LENRAGTLLCGLRQAWWAHRLRG*CGDDLE
Trigger: TTCCAGGTCATCTCCACACCAGCCCCTCAGCCGGTG...CGCCCACCAAGCTTGTCTGAGGCCACAGAGCAGCGTCCCAGCCCTGTTTTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp CTGGAAAACAGGGCTGGGACGCTGCTCTGTGGCCTCAGACAAGCTTGGTGGGCGTGTGGGCTCCGGAGCTaGGTCTGGGGAAAAGCTGGT +
Preference number: 4 (lower is better)
Translates to: LENRAGTLLCGLRQAWWACGLRS*VWGKAG
Trigger: ACCAGCTTTTCCCCAGACCCAGCTCCGGAGCCCACA...CGCCCACCAAGCTTGTCTGAGGCCACAGAGCAGCGTCCCAGCCCTGTTTTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp AGGCCAGGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTCAGGCCAGACACTGCTaGGCGATGACTGTTACTTCC +
Preference number: 4 (lower is better)
Translates to: RPGLGRAPVVLGVKGTSAQARHC*AMTVTS
Trigger: GGAAGTAACAGTCATCGCCCAGCAGTGTCTGGCCTG...AGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACCTGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GGAAATGCACGGAACCCATGGGACAGGGCTGGTTCTGGGAGGCTTGTGAACCCTAGCCTGAGATGGGGCTaGCCTCCTGCCCGGCACACT +
Preference number: 4 (lower is better)
Translates to: GNARNPWDRAGSGRLVNPSLRWG*PPARHT
Trigger: AGTGTGCCGGGCAGGAGGCCAGCCCCATCTCAGGCT...AGGGTTCACAAGCCTCCCAGAACCAGCCCTGTCCCATGGGTTCCGTGCATTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGACACCAGGCCTCAGACAAGCTTaGTGGGCGACATGCTCAAGT +
Preference number: 4 (lower is better)
Translates to: AAPRCTDEVGGDQAEVTPGLRQA*WATCSS
Trigger: ACTTGAGCATGTCGCCCACCAAGCTTGTCTGAGGCC...TGGTGTCACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GCCAGGGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGCTAGACACAAACGTCTaGACTGTAGTCTCTGACTGC +
Preference number: 4 (lower is better)
Translates to: ARGWLHRAAQMRSAVTRQLDTNV*TVVSDC
Trigger: GCAGTCAGAGACTACAGTCCAGACGTTTGTGTCTAG...CTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GCAGCAGGCGCGGTGCCACGGCTTTGGGGACCAGCTGGTCACCAGGAGTCCTGCTCAACCGCATGTCCTTaGAGCACCGTATTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: AAGAVPRLWGPAGHQESCSTACP*STVFWS
Trigger: TGACCAGAATACGGTGCTCCAAGGACATGCGGTTGA...GCAGGACTCCTGGTGACCAGCTGGTCCCCAAAGCCGTGGCACCGCGCCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR CCA 90 bp GTCTCTGACTGCCGTTCCCTTGGGTCCAGGCCTCTGGCGGGAGGGCGGGACCCCAGATGGGGAATAAACTaGGCTTTAATGGGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: VSDCRSLGSRPLAGGRDPRWGIN*ALMGRE
Trigger: CTCCCTCCCCATTAAAGCCCAGTTTATTCCCCATCT...GGGGTCCCGCCCTCCCGCCAGAGGCCTGGACCCAAGGGAACGGCAGTCAGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR CCA 90 bp AACGTCTGGACTGTAGTCTCTGACTGCCGTTCCCTTGGGTCCAGGCCTCTGGCGACTCCGTGCTGTGCCTaGTGCTGCGTGGGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: NVWTVVSDCRSLGSRPLATPCCA*CCVGPE
Trigger: CTCAGGACCCACGCAGCACCAGGCACAGCACGGAGT...CGCCAGAGGCCTGGACCCAAGGGAACGGCAGTCAGAGACTACAGTCCAGACGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649953.1
3UTR CAA 72 bp GGCTTCCTGCTCAGAGAGAGGCAGATGAGCCCCACGTaGCTACCGCGGTCGTCCATCCCGTGCTCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: GFLLRERQMSPT*LPRSSIPCSCL
Trigger: CAGACAAGAGCACGGGATGGACGACCGCGGTAGCAACGTGGGGCTCATCTGCCTCTCTCTGAGCAGGAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR TCA 90 bp ATAAACTGGGCTTTAATGGGGAGGGAGGAGAGGATGAGTTCCCTCCAGGACGGGCCAGGCGCCGGAAGGTaGGCACCACATGGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: INWALMGREERMSSLQDGPGAGR*APHGAA
Trigger: TGCTGCCCCATGTGGTGCTCACCTTCCGGCGCCTGG...CCCGTCCTGGAGGGAACTCATCCTCTCCTCCCTCCCCATTAAAGCCCAGTTTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp TTTAATGGGGAGGGAGGAGAGGATGAGTTCCCTCCAGGACGGGCTTGTTCTCGGACCGCCACTCATCCATaGCGCCCACTGGGCCACGAC +
Preference number: 4 (lower is better)
Translates to: FNGEGGEDEFPPGRACSRTATHP*RPLGHD
Trigger: GTCGTGGCCCAGTGGGCGTCATGGATGAGTGGCGGT...CCGAGAACAAGCCCGTCCTGGAGGGAACTCATCCTCTCCTCCCTCCCCATTAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp GAGTGTCCTTCTCGGAGGGTCACCACAGCAGTGACCCGCTGGCCCCATGTCATATCTGGGAGTCGCAGATaGCATACTCCAGCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: ECPSRRVTTAVTRWPHVISGSRR*HTPAGP
Trigger: CGGCCCAGCTGGAGTATGTCATCTGCGACTCCCAGA...TATGACATGGGGCCAGCGGGTCACTGCTGTGGTGACCCTCCGAGAAGGACACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542688.5
CDS-3UTR TCA 90 bp TGGACACACAGTAGTGTGCAGGGTGGCAGGTGTCCCCACAGTGGGAGCTGCTCTGACAGAGCAGCGCGTTaGCCACACCATGGACGTGGT +
Preference number: 4 (lower is better)
Translates to: WTHSSVQGGRCPHSGSCSDRAAR*PHHGRG
Trigger: ACCACGTCCATGGTGTGGTCAACGCGCTGCTCTGTC...AGAGCAGCTCCCACTGTGGGGACACCTGCCACCCTGCACACTACTGTGTGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp AGGCCAGGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTAAACCTGCTGAGGGCTaGACTCAGGCATCATCACAC +
Preference number: 4 (lower is better)
Translates to: RPGLGRAPVVLGVKGTSAKPAEG*TQASSH
Trigger: GTGTGATGATGCCTGAGTTCAGCCCTCAGCAGGTTT...AGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACCTGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp GCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGACACCATTTTCCCAAACCTGCTaGGGGCTGAACTCAGGCATC +
Preference number: 4 (lower is better)
Translates to: AAPRCTDEVGGDQAEVTPFSQTC*GLNSGI
Trigger: GATGCCTGAGTTCAGCCCTCAGCAGGTTTGGGAAAA...TGGTGTCACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp ACACCTGGAGAGGGCTGCACAGCCACGGGGCGTCTCACTCCTCCACACGCCACTTTTTCCCAAACCTGCTaGGGGCTGAACTCAGGCATC +
Preference number: 4 (lower is better)
Translates to: TPGEGCTATGRLTPPHATFSQTC*GLNSGI
Trigger: GATGCCTGAGTTCAGCCCTCAGCAGGTTTGGGAAAA...AGTGGCGTGTGGAGGAGTGAGACGCCCCGTGGCTGTGCAGCCCTCTCCAGGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000543676.1
CDS-3UTR TCA 90 bp ACCCAGGCACAGGCTGAGCCCCGTCCCTGCAGACAGGGTTGGAACTGGCTGAGCCCTCTGTGGGTTTTCTaGGACAATGCGCACCTGTAC +
Preference number: 4 (lower is better)
Translates to: TQAQAEPRPCRQGWNWLSPLWVF*DNAHLY
Trigger: GTACAGGTGCGCATTGTCTCAGAAAACCCACAGAGG...GCTCAGCCAGTTCCAACCCTGTCTGCAGGGACGGGGCTCAGCCTGTGCCTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543676.1
CDS-3UTR TCA 90 bp TCCGGGGGCAGAATGTTCTGGGTAAGTTCAGGCCAGACACTGCTGGGCGATGACCCACCTCCAGGGCGCTaGCCTTGTAGCCTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: SGGRMFWVSSGQTLLGDDPPPGR*PCSLQS
Trigger: AGACTGGAGGCTACAAGGTCAGCGCCCTGGAGGTGG...GTCATCGCCCAGCAGTGTCTGGCCTGAACTTACCCAGAACATTCTGCCCCCGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp AATCACAGCCACATCTGTGATGCTGGGGTGGGCCAGCAGGTGCCACTCCACCTCTCACAGCCACATCTGTaGTGCTGGGGTGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: NHSHICDAGVGQQVPLHLSQPHL*CWGGPA
Trigger: TGCTGGCCCACCCCAGCATCACAGATGTGGCTGTGA...GAGGTGGAGTGGCACCTGCTGGCCCACCCCAGCATCACAGATGTGGCTGTGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542688.5
CDS-3UTR TCA 90 bp AGGCCAGGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTCTGGGGAAAAGCTGGTaGGCCACAGACATGAAATGG +
Preference number: 4 (lower is better)
Translates to: RPGLGRAPVVLGVKGTSALGKSW*ATDMKW
Trigger: CCATTTCATGTCTGTGGCTCACCAGCTTTTCCCCAG...AGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACCTGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp CCCCTTTCTCTGGCAACATTTCTGCCATTTCCGGCAGAGCAGGTGCTCAGAGGCAACCCAGGCACAGGCTaGGCCCCGTCCCTGCAGACA +
Preference number: 4 (lower is better)
Translates to: PLSLATFLPFPAEQVLRGNPGTG*APSLQT
Trigger: TGTCTGCAGGGACGGGGCTCAGCCTGTGCCTGGGTT...GCCTCTGAGCACCTGCTCTGCCGGAAATGGCAGAAATGTTGCCAGAGAAAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543676.1
CDS-3UTR TCA 90 bp TCTGCCATTTCCGGCAGAGCAGGTGCTCAGAGGCAGGAGTGTCAGCTGACTGACGGCAGGAGTGTCAGCTaGCTGACACCTGGAGAGGGC +
Preference number: 4 (lower is better)
Translates to: SAISGRAGAQRQECQLTDGRSVS*LTPGEG
Trigger: GCCCTCTCCAGGTGTCAGTCAGCTGACACTCCTGCC...GTCAGTCAGCTGACACTCCTGCCTCTGAGCACCTGCTCTGCCGGAAATGGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543676.1
CDS-3UTR GCA 90 bp ATGGGGCTGGCCTCCTGCCCGGCACACTCGTTTCTGGCCACTCTTTCAGACGTGGGGACAGGCGAAGGCTaGGGGAATAAAGCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: MGLASCPAHSFLATLSDVGTGEG*GNKAPC
Trigger: ACAGGGAGCTTTATTCCCGCAGCCTTCGCCTGTCCC...CACGTCTGAAAGAGTGGCCAGAAACGAGTGTGCCGGGCAGGAGGCCAGCCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp CACCAGCTCCGAGGGCACCGCGTACGGGGCCAGGACATTTCTGGCCCACTCTTTTGCCGGTTCCTCTACTaGTCCAGTGTAGATGGCTGG +
Preference number: 4 (lower is better)
Translates to: HQLRGHRVRGQDISGPLFCRFLY*SSVDGW
Trigger: CCAGCCATCTACACTGGAGCAGTAGAGGAACCGGCA...AAAGAGTGGGCCAGAAATGTCCTGGCCCCGTACGCGGTGCCCTCGGAGCTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542688.5
CDS-3UTR GCA 90 bp ATGGGGCTGGCCTCCTGCCCGGCACACTCGTTTCTGGCCACTCTTTCAGACGTGGCCCTGATGTTTTGGTaGGTGCTCAGCACGCCCTTG +
Preference number: 4 (lower is better)
Translates to: MGLASCPAHSFLATLSDVALMFW*VLSTPL
Trigger: CAAGGGCGTGCTGAGCACGCACCAAAACATCAGGGC...CACGTCTGAAAGAGTGGCCAGAAACGAGTGTGCCGGGCAGGAGGCCAGCCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp TGGACACACAGTAGTGTGCAGGGTGGCAGGTGTCCCCACAGTGGGAGCTGCTCTTGCCGATCTCGGTCATaGCATACCGCTCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: WTHSSVQGGRCPHSGSCSCRSRS*HTAPAG
Trigger: CCCTGCTGGAGCGGTATGGCATGACCGAGATCGGCA...AGAGCAGCTCCCACTGTGGGGACACCTGCCACCCTGCACACTACTGTGTGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp GCCAGGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCGGTTTTCTGAGACAATaGGCACCTGTACTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: ARSWTGPRGSRCEGDVCCGFLRQ*APVLQA
Trigger: TGCCTGGAGTACAGGTGCGCATTGTCTCAGAAAACC...GCAGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp GGTCTTGGACGGGCCCCCGTGGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCGGTTTTCTGAGACAATaGGCACCTGTACTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: GLGRAPVVLGVKGTSAAPGFLRQ*APVLQA
Trigger: TGCCTGGAGTACAGGTGCGCATTGTCTCAGAAAACC...GGGAGCAGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp CTGGAAAACAGGGCTGGGACGCTGCTCTGTGGCCTCAGACAAGCTTGGTGGGCGCCTCTCGTCTCCCTCTaGGTGGATGGTGTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: LENRAGTLLCGLRQAWWAPLVSL*VDGVGA
Trigger: TGCTCCTACACCATCCACGCAGAGGGAGACGAGAGG...CGCCCACCAAGCTTGTCTGAGGCCACAGAGCAGCGTCCCAGCCCTGTTTTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp GGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGCCTTCTTGTCAATCTTaGCCATCTGGTTCCGCGGGA +
Preference number: 4 (lower is better)
Translates to: GSRCEGDVCCSPPDPQSQPSCQS*PSGSAG
Trigger: TCCCGCGGAACCAGATGGGCAAGATTGACAAGAAGG...CTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACACCGAGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp GCCAGGACATTTCTGGCCCACTCTTTGAGCTCCCTGTGGGACAGTGAGTGTCCTGAAGGGGACGTCTGCTaGTCCCCACCAGACCCGCAG +
Preference number: 4 (lower is better)
Translates to: ARTFLAHSLSSLWDSECPEGDVC*SPPDPQ
Trigger: CTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTC...AGGACACTCACTGTCCCACAGGGAGCTCAAAGAGTGGGCCAGAAATGTCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542688.5
CDS-3UTR GCA 90 bp TTTAATGGGGAGGGAGGAGAGGATGAGTTCCCTCCAGGACGGGCTTGTTCTCGGCTGGCTGCACCGCGCTaGACAGATGAGGTCGGCGGT +
Preference number: 4 (lower is better)
Translates to: FNGEGGEDEFPPGRACSRLAAPR*TDEVGG
Trigger: ACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAG...CCGAGAACAAGCCCGTCCTGGAGGGAACTCATCCTCTCCTCCCTCCCCATTAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp AACGTCTGGACTGTAGTCTCTGACTGCCGTTCCCTTGGGTCCAGGCCTCTGGCGGGACACACAGTAGTGTaGAGGGTGGCAGGTGTCCCC +
Preference number: 4 (lower is better)
Translates to: NVWTVVSDCRSLGSRPLAGHTVV*RVAGVP
Trigger: GGGGACACCTGCCACCCTGCACACTACTGTGTGTCC...CGCCAGAGGCCTGGACCCAAGGGAACGGCAGTCAGAGACTACAGTCCAGACGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR GCA 90 bp GGTTCTCGGTGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGCCACTCTTTCAGACGTaGATTCCGGGGGCAGAATGT +
Preference number: 4 (lower is better)
Translates to: GSRCEGDVCCSPPDPQSQPLFQT*IPGAEC
Trigger: ACATTCTGCCCCCGGAATGCACGTCTGAAAGAGTGG...CTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACACCGAGAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp CTGGCCTCCTGCCCGGCACACTCGTTTCTGGCCACTCTTTCAGACGTGCATTCCAAATGCTCATCCTCCTaGGGCAGGCACCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LASCPAHSFLATLSDVHSKCSSS*GRHQAW
Trigger: CCAGGCCTGGTGCCTGCCCCAGGAGGATGAGCATTT...GGAATGCACGTCTGAAAGAGTGGCCAGAAACGAGTGTGCCGGGCAGGAGGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317447.9
ENST00000614302.5
CDS-3UTR CCA 90 bp CATTCCGGGGGCAGAATGTTCTGGGTAAGTTCAGGCCAGACACTGCTGGGCGATGTCCGAGCGGGCCACTaGGGCTGTGTGCAGAAGACC +
Preference number: 4 (lower is better)
Translates to: HSGGRMFWVSSGQTLLGDVRAGH*GCVQKT
Trigger: GGTCTTCTGCACACAGCCCCAGTGGCCCGCTCGGAC...ATCGCCCAGCAGTGTCTGGCCTGAACTTACCCAGAACATTCTGCCCCCGGAATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGACACCAAGGACCACAGAGCTCTaGGAGTCGCAGATGACATAC +
Preference number: 4 (lower is better)
Translates to: AAPRCTDEVGGDQAEVTPRTTEL*ESQMTY
Trigger: GTATGTCATCTGCGACTCCCAGAGCTCTGTGGTCCT...TGGTGTCACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp AAACGAATGGAGGAGGCAGGAGCTGGGTCCATGGTCTCCCTGCCAGGGAAGCCGCCAGGTACTCCTGGCTaGCAAGGACCACAGAGCTCT +
Preference number: 4 (lower is better)
Translates to: KRMEEAGAGSMVSLPGKPPGTPG*QGPQSS
Trigger: AGAGCTCTGTGGTCCTTGCCAGCCAGGAGTACCTGG...CGGCTTCCCTGGCAGGGAGACCATGGACCCAGCTCCTGCCTCCTCCATTCGTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR CCA 90 bp CTGGAAAACAGGGCTGGGACGCTGCTCTGTGGCCTCAGACAAGCTTGGTGGGCGACAGCCCTGATGTTTTaGTGCGTGCTCAGCACGCCC +
Preference number: 4 (lower is better)
Translates to: LENRAGTLLCGLRQAWWATALMF*CVLSTP
Trigger: GGGCGTGCTGAGCACGCACCAAAACATCAGGGCTGT...CGCCCACCAAGCTTGTCTGAGGCCACAGAGCAGCGTCCCAGCCCTGTTTTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp AGCAGCACCAGGAAATGCACGGAACCCATGGGACAGGGCTGGTTCTGGGAGGCTGTCCATGCCCACTTGTaGACCAGCCCGGTCACCACA +
Preference number: 4 (lower is better)
Translates to: SSTRKCTEPMGQGWFWEAVHAHL*TSPVTT
Trigger: TGTGGTGACCGGGCTGGTCCACAAGTGGGCATGGAC...AGCCTCCCAGAACCAGCCCTGTCCCATGGGTTCCGTGCATTTCCTGGTGCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp TGGACACACAGTAGTGTGCAGGGTGGCAGGTGTCCCCACAGTGGGAGCTGCTCTGTCCATGCCCACTTGTaGACCAGCCCGGTCACCACA +
Preference number: 4 (lower is better)
Translates to: WTHSSVQGGRCPHSGSCSVHAHL*TSPVTT
Trigger: TGTGGTGACCGGGCTGGTCCACAAGTGGGCATGGAC...AGAGCAGCTCCCACTGTGGGGACACCTGCCACCCTGCACACTACTGTGTGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp AACGTCTGGACTGTAGTCTCTGACTGCCGTTCCCTTGGGTCCAGGCCTCTGGCGCGCTCCAGCAGGGTGTaGCCCGTGATGTTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: NVWTVVSDCRSLGSRPLARSSRV*PVMFFH
Trigger: GTGGAAGAACATCACGGGCCACACCCTGCTGGAGCG...CGCCAGAGGCCTGGACCCAAGGGAACGGCAGTCAGAGACTACAGTCCAGACGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp TCCAAGAGCAGCACCAGGAAATGCACGGAACCCATGGGACAGGGCTGGTTCTGGCTGTACTCCAGGCAGTaGGGTCCCCACGGAACCTGG +
Preference number: 4 (lower is better)
Translates to: SKSSTRKCTEPMGQGWFWLYSRQ*GPHGTW
Trigger: CCAGGTTCCGTGGGGACCCCACTGCCTGGAGTACAG...CCAGAACCAGCCCTGTCCCATGGGTTCCGTGCATTTCCTGGTGCTGCTCTTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317447.9
ENST00000614302.5
CDS-3UTR CCA 90 bp GCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGACACCACCTCGGATCCAGTACTaGCCATCCTTAAACACCACG +
Preference number: 4 (lower is better)
Translates to: AAPRCTDEVGGDQAEVTPPRIQY*PSLNTT
Trigger: CGTGGTGTTTAAGGATGGCCAGTACTGGATCCGAGG...TGGTGTCACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp TCCAAGAGCAGCACCAGGAAATGCACGGAACCCATGGGACAGGGCTGGTTCTGGTCTGTGATGCTGGGGTaGGCCAGCAGGTGCCACTCC +
Preference number: 4 (lower is better)
Translates to: SKSSTRKCTEPMGQGWFWSVMLG*ASRCHS
Trigger: GGAGTGGCACCTGCTGGCCCACCCCAGCATCACAGA...CCAGAACCAGCCCTGTCCCATGGGTTCCGTGCATTTCCTGGTGCTGCTCTTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp TGTGAAGGGGACGTCTGCTGCTCCCCACCAGACCCGCAGTCCCAGTCTGCCGGGTCTTTGAGCTCCCTGTaGGACAGTGAGTGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: CEGDVCCSPPDPQSQSAGSLSSL*DSECPS
Trigger: AGAAGGACACTCACTGTCCCACAGGGAGCTCAAAGA...CCCGGCAGACTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317447.9
ENST00000378345.8
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp CTGACTGTTCCCGGGGTCAGGCCATGGGGATGCACAAGGCCACACCGTGAGGCATCAATCTTGCCCATCTaGTTCCGCGGGATCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LTVPGVRPWGCTRPHREASILPI*FRGISS
Trigger: GGAGGAGATCCCGCGGAACCAGATGGGCAAGATTGA...TGCCTCACGGTGTGGCCTTGTGCATCCCCATGGCCTGACCCCGGGAACAGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp AGCTCCGAGGGCACCGCGTACGGGGCCAGGACATTTCTGGCCCACTCTTTGAGCTCAATCTTGCCCATCTaGTTCCGCGGGATCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SSEGTAYGARTFLAHSLSSILPI*FRGISS
Trigger: GGAGGAGATCCCGCGGAACCAGATGGGCAAGATTGA...GCTCAAAGAGTGGGCCAGAAATGTCCTGGCCCCGTACGCGGTGCCCTCGGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542688.5
CDS-3UTR CCA 90 bp GTCACCACAGCAGTGACCCGCTGGCCCCATGTCATATCCGGAACTCCAATCACAAGGGAGGCCAGGTCTTaGACGGGCCCCCGTGGTTCT +
Preference number: 4 (lower is better)
Translates to: VTTAVTRWPHVISGTPITREARS*TGPRGS
Trigger: AGAACCACGGGGGCCCGTCCAAGACCTGGCCTCCCT...TGTGATTGGAGTTCCGGATATGACATGGGGCCAGCGGGTCACTGCTGTGGTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542688.5
CDS-3UTR CCA 90 bp GGAAATGCACGGAACCCATGGGACAGGGCTGGTTCTGGGAGGCTTGTGAACCCTTTGAGCTGCAACAACTaGCCCGAGGCTGGGGACCCC +
Preference number: 4 (lower is better)
Translates to: GNARNPWDRAGSGRLVNPLSCNN*PEAGDP
Trigger: GGGGTCCCCAGCCTCGGGCCAGTTGTTGCAGCTCAA...AGGGTTCACAAGCCTCCCAGAACCAGCCCTGTCCCATGGGTTCCGTGCATTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp CATTCCGGGGGCAGAATGTTCTGGGTAAGTTCAGGCCAGACACTGCTGGGCGATAACTGCAGGGCACTGTaGGGCGGGAGGTGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: HSGGRMFWVSSGQTLLGDNCRAL*GGRCLS
Trigger: GCTGAGGCACCTCCCGCCCCACAGTGCCCTGCAGTT...ATCGCCCAGCAGTGTCTGGCCTGAACTTACCCAGAACATTCTGCCCCCGGAATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp CAACACACCTTCCTGAGGTTTCTGCATCGGCCACGCCTGTGGGCTCCGGAGCTGTTTGTGGGAAACCTCTaGGACCTGCCCTGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: QHTFLRFLHRPRLWAPELFVGNL*DLPWRA
Trigger: GGCTCTCCAGGGCAGGTCCCAGAGGTTTCCCACAAA...CAGCTCCGGAGCCCACAGGCGTGGCCGATGCAGAAACCTCAGGAAGGTGTGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp TCCGGGGGCAGAATGTTCTGGGTAAGTTCAGGCCAGACACTGCTGGGCGATGACCCCAGACCTCCTATGTaGGCCGGGAGACACTGGCTC +
Preference number: 4 (lower is better)
Translates to: SGGRMFWVSSGQTLLGDDPRPPM*AGRHWL
Trigger: GAGCCAGTGTCTCCCGGCCCACATAGGAGGTCTGGG...GTCATCGCCCAGCAGTGTCTGGCCTGAACTTACCCAGAACATTCTGCCCCCGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp CAACACACCTTCCTGAGGTTTCTGCATCGGCCACGCCTGTGGGCTCCGGAGCTGCCCATGGGACAGGGCTaGTTCTGGGAGGCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: QHTFLRFLHRPRLWAPELPMGQG*FWEACE
Trigger: TTCACAAGCCTCCCAGAACCAGCCCTGTCCCATGGG...CAGCTCCGGAGCCCACAGGCGTGGCCGATGCAGAAACCTCAGGAAGGTGTGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp CTGGCCTCCTGCCCGGCACACTCGTTTCTGGCCACTCTTTCAGACGTGCATTCCGGTGTGGAGATGACCTaGAAAGTCCCTGCGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LASCPAHSFLATLSDVHSGVEMT*KVPALG
Trigger: CCCCAGCGCAGGGACTTTCCAGGTCATCTCCACACC...GGAATGCACGTCTGAAAGAGTGGCCAGAAACGAGTGTGCCGGGCAGGAGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp GGGCTGGCTGCACCGCGCTGCACAGATGAGGTCGGCGGTGACCAGGCAGAGGTGCTAGACACAAACGTCTaGACTGTAGTCTCTGACTGC +
Preference number: 4 (lower is better)
Translates to: GLAAPRCTDEVGGDQAEVLDTNV*TVVSDC
Trigger: GCAGTCAGAGACTACAGTCCAGACGTTTGTGTCTAG...CACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp ACATGCTCAAGTGAGCAGGGGCCCCAGGCCACGTCCAACTGTCCGCGAGGCATGTGGAGCACCGTATTCTaGTCAACCGGCTGGTCAACG +
Preference number: 4 (lower is better)
Translates to: TCSSEQGPQATSNCPRGMWSTVF*STGWST
Trigger: CGTTGACCAGCCGGTTGACCAGAATACGGTGCTCCA...CATGCCTCGCGGACAGTTGGACGTGGCCTGGGGCCCCTGCTCACTTGAGCATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp CTGACTGTTCCCGGGGTCAGGCCATGGGGATGCACAAGGCCACACCGTGAGGCATGGAGCACCGTATTCTaGTCAACCGGCTGGTCAACG +
Preference number: 4 (lower is better)
Translates to: LTVPGVRPWGCTRPHREAWSTVF*STGWST
Trigger: CGTTGACCAGCCGGTTGACCAGAATACGGTGCTCCA...TGCCTCACGGTGTGGCCTTGTGCATCCCCATGGCCTGACCCCGGGAACAGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR CCA 90 bp ACGAATGGAGGAGGCAGGAGCTGGGTCCATGGTCTCCCTGCCAGGGAAGCCGCAGGCACAGGGACCAGCTaGAGAGTCACTCGTGACTTT +
Preference number: 4 (lower is better)
Translates to: TNGGGRSWVHGLPAREAAGTGTS*RVTRDF
Trigger: AAAGTCACGAGTGACTCTCCAGCTGGTCCCTGTGCC...TGCGGCTTCCCTGGCAGGGAGACCATGGACCCAGCTCCTGCCTCCTCCATTCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR CCA 90 bp TCTCTGGCAACATTTCTGCCATTTCCGGCAGAGCAGGTGCTCAGAGGCAGGAGTGGGAGGTCCTCGAGTTaGGGGCAGGGGCACTGCAGG +
Preference number: 4 (lower is better)
Translates to: SLATFLPFPAEQVLRGRSGRSSS*GQGHCR
Trigger: CCTGCAGTGCCCCTGCCCCCAACTCGAGGACCTCCC...ACTCCTGCCTCTGAGCACCTGCTCTGCCGGAAATGGCAGAAATGTTGCCAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543676.1
CDS-3UTR CCA 90 bp CTGGCCTCCTGCCCGGCACACTCGTTTCTGGCCACTCTTTCAGACGTGCATTCCGCTTTGGGGACCAGCTaGTCACCAGGAGTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: LASCPAHSFLATLSDVHSALGTS*SPGVLP
Trigger: TGGCAGGACTCCTGGTGACCAGCTGGTCCCCAAAGC...GGAATGCACGTCTGAAAGAGTGGCCAGAAACGAGTGTGCCGGGCAGGAGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649953.1
CDS-3UTR TCA 90 bp TCCGGGGGCAGAATGTTCTGGGTAAGTTCAGGCCAGACACTGCTGGGCGATGACTCTGGGAGTCGCAGATaGCATACTCCAGCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: SGGRMFWVSSGQTLLGDDSGSRR*HTPAGP
Trigger: CGGCCCAGCTGGAGTATGTCATCTGCGACTCCCAGA...GTCATCGCCCAGCAGTGTCTGGCCTGAACTTACCCAGAACATTCTGCCCCCGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp ACAACTGGCCCGAGGCTGGGGACCCCACATGGTGATTTCATCCCAAACAGTTCTTGTAGATGGCTGGTGTaGGCGGCAGCAGCGGGACCC +
Preference number: 4 (lower is better)
Translates to: TTGPRLGTPHGDFIPNSSCRWLV*AAAAGP
Trigger: GGGTCCCGCTGCTGCCGCTCACACCAGCCATCTACA...AGAACTGTTTGGGATGAAATCACCATGTGGGGTCCCCAGCCTCGGGCCAGTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317447.9
ENST00000406948.7
ENST00000542688.5
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp ACATGCTCAAGTGAGCAGGGGCCCCAGGCCACGTCCAACTGTCCGCGAGGCATGAAACCTGCTGAGGGCTaGACTCAGGCATCATCACAC +
Preference number: 4 (lower is better)
Translates to: TCSSEQGPQATSNCPRGMKPAEG*TQASSH
Trigger: GTGTGATGATGCCTGAGTTCAGCCCTCAGCAGGTTT...CATGCCTCGCGGACAGTTGGACGTGGCCTGGGGCCCCTGCTCACTTGAGCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp CTCCGAGGGCACCGCGTACGGGGCCAGGACATTTCTGGCCCACTCTTTGAGCTCTTTTCCCAAACCTGCTaGGGGCTGAACTCAGGCATC +
Preference number: 4 (lower is better)
Translates to: LRGHRVRGQDISGPLFELFSQTC*GLNSGI
Trigger: GATGCCTGAGTTCAGCCCTCAGCAGGTTTGGGAAAA...GAGCTCAAAGAGTGGGCCAGAAATGTCCTGGCCCCGTACGCGGTGCCCTCGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542688.5
CDS-3UTR TCA 90 bp TGGACACACAGTAGTGTGCAGGGTGGCAGGTGTCCCCACAGTGGGAGCTGCTCTGCAGGGTGTGGCCCGTaGTGTTCTTCCACTTCTCCA +
Preference number: 4 (lower is better)
Translates to: WTHSSVQGGRCPHSGSCSAGCGP*CSSTSP
Trigger: TGGAGAAGTGGAAGAACATCACGGGCCACACCCTGC...AGAGCAGCTCCCACTGTGGGGACACCTGCCACCCTGCACACTACTGTGTGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317447.9
ENST00000614302.5
ENST00000649953.1
CDS-3UTR TCA 90 bp AGCTCCGAGGGCACCGCGTACGGGGCCAGGACATTTCTGGCCCACTCTTTGAGCCCTCTGTGGGTTTTCTaGGACAATGCGCACCTGTAC +
Preference number: 4 (lower is better)
Translates to: SSEGTAYGARTFLAHSLSPLWVF*DNAHLY
Trigger: GTACAGGTGCGCATTGTCTCAGAAAACCCACAGAGG...GCTCAAAGAGTGGGCCAGAAATGTCCTGGCCCCGTACGCGGTGCCCTCGGAGCT
60% GC, longest homopo