RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ACSBG2 (Homo sapiens)

Ensembl gene IDs: ENSG00000130377

Ensembl transcript IDs: ENST00000585526.5, ENST00000586696.5, ENST00000587227.1, ENST00000587617.1, ENST00000588304.5, ENST00000588485.6, ENST00000588722.5, ENST00000589401.5, ENST00000590132.1, ENST00000591403.5, ENST00000591738.5, ENST00000591741.5, ENST00000592677.5, ENST00000681479.1, ENST00000681525.1

Found 820 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTAGACCAGGGGGTCTTGCTGCTTCACAATCTCAGTCACGGTGGATaGCTGGCTGCCCAGACCCCGACAGAAGTTGATGGCCTCGAAGTT +
Preference number: 1 (lower is better)
Translates to: VDQGVLLLHNLSHGG*LAAQTPTEVDGLEV
Trigger: AACTTCGAGGCCATCAACTTCTGTCGGGGTCTGGGCAGCCAGGCATCCACCGTGACTGAGATTGTGAAGCAGCAAGACCCCCTGGTCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681479.1
3UTR TCA 90 bp GTTGTCATGACTGAGCATCACTCCCTTGGGTATGCCTGTGGTCCCTaGAGTGTAGATGAGCACTGCGCATTGATTCGCCTTCTGGCTCTC +
Preference number: 1 (lower is better)
Translates to: VVMTEHHSLGYACGP*SVDEHCALIRLLAL
Trigger: GAGAGCCAGAAGGCGAATCAATGCGCAGTGCTCATCTACACTTCAGGGACCACAGGCATACCCAAGGGAGTGATGCTCAGTCATGACAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592677.5
ENST00000681479.1
3UTR TCA 90 bp TTTCAATCCTCTGTGCATTGTTCATGGCTTCCTGGTTCACAGCATTaGTGCCTTGCTGGATGGCCTTGTAGACCAGGGGGTCTTGCTGCT +
Preference number: 1 (lower is better)
Translates to: FQSSVHCSWLPGSQH*CLAGWPCRPGGLAA
Trigger: AGCAGCAAGACCCCCTGGTCTACAAGGCCATCCAGCAAGGCATCAATGCTGTGAACCAGGAAGCCATGAACAATGCACAGAGGATTGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590132.1
ENST00000681479.1
3UTR CCA 90 bp CAGTCAAGATCTTGCCACAGCTTAGAAGCCTGTAGTTATTCTGGTTaGATATCGTGTGGGGTCCCGAGCTCTCACTCAACCCATACAACT +
Preference number: 1 (lower is better)
Translates to: QSRSCHSLEACSYSG*ISCGVPSSHSTHTT
Trigger: AGTTGTATGGGTTGAGTGAGAGCTCGGGACCCCACACGATATCCAACCAGAATAACTACAGGCTTCTAAGCTGTGGCAAGATCTTGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681479.1
3UTR TCA 90 bp AGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTaGTTTGGGGGTCCAGTTCTTCAAATCTGTGAGGCTTTTTCTTTC +
Preference number: 1 (lower is better)
Translates to: RTYWKGFPVASRQVS*FGGPVLQICEAFSF
Trigger: GAAAGAAAAAGCCTCACAGATTTGAAGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
3UTR TCA 90 bp TTGGACCTAGCTCTCCACCATAGATGGAAAAGTCCTTCTCCAAGATaGCCCACTTTTCAATCCTCTGTGCATTGTTCATGGCTTCCTGGT +
Preference number: 1 (lower is better)
Translates to: LDLALHHRWKSPSPR*PTFQSSVHCSWLPG
Trigger: ACCAGGAAGCCATGAACAATGCACAGAGGATTGAAAAGTGGGTCATCTTGGAGAAGGACTTTTCCATCTATGGTGGAGAGCTAGGTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681479.1
3UTR GCA 90 bp AAAAACAGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTaGAATGAGGTCTTCCTGCTGAAGGCATCAGAACAGCTGAGAGCA +
Preference number: 1 (lower is better)
Translates to: KNSRESFYLEQHFTY*NEVFLLKASEQLRA
Trigger: TGCTCTCAGCTGTTCTGATGCCTTCAGCAGGAAGACCTCATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
3UTR TCA 90 bp TTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTaGGTTGATTTGGGGGTCCAGTTCTTCAAATCTGTGAGGCTTTTT +
Preference number: 1 (lower is better)
Translates to: LSGLIGRVSQLLPGR*VDLGVQFFKSVRLF
Trigger: AAAAAGCCTCACAGATTTGAAGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
3UTR GCA 90 bp CCTGAAGTGCTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTaGTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTTCAAAT +
Preference number: 1 (lower is better)
Translates to: PEVLYYQDLLEGFPS*FQAGELIWGSSSSN
Trigger: ATTTGAAGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAGCACTTCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
3UTR CCA 90 bp CTTGTAAATCAGGCAGTTTTTAGTAGACTTCCCAATAGGCTTCCCTaGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTT +
Preference number: 1 (lower is better)
Translates to: LVNQAVFSRLPNRLP*SHDLKVLRKIYSDF
Trigger: AAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACTAAAAACTGCCTGATTTACAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
3UTR CAA 90 bp CACAGCATTGATGCCTTGCTGGATGGCCTTGTAGACCAGGGGGTCTaGCTGCTTCACAATCTCAGTCACGGTGGATGCCTGGCTGCCCAG +
Preference number: 2 (lower is better)
Translates to: HSIDALLDGLVDQGV*LLHNLSHGGCLAAQ
Trigger: CTGGGCAGCCAGGCATCCACCGTGACTGAGATTGTGAAGCAGCAAGACCCCCTGGTCTACAAGGCCATCCAGCAAGGCATCAATGCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681479.1
3UTR-3UTR GCA 90 bp GAGCACCTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGGAATGTGGCCGGTGGATGCCTGGCTaGCCAGACCCCGACAGAAGT +
Preference number: 2 (lower is better)
Translates to: EHLSNRRTIKKLTNEECGRWMPG*PDPDRS
Trigger: ACTTCTGTCGGGGTCTGGGCAGCCAGGCATCCACCG...GCCACATTCCTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681479.1
3UTR-3UTR TCA 90 bp GACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGATGAGCACTGCGCATTaGTTCGCCTTCTGGCTCTCG +
Preference number: 2 (lower is better)
Translates to: DLLEGFPSCFQAGELIWGMSTAH*FAFWLS
Trigger: CGAGAGCCAGAAGGCGAATCAATGCGCAGTGCTCAT...CCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681479.1
3UTR-3UTR TCA 90 bp GACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTTGCTTCCAGGCAGGTaGGTTGATTTGGGGGTCCAG +
Preference number: 2 (lower is better)
Translates to: DLLEGFPSCFQAGELIWGLLPGR*VDLGVQ
Trigger: CTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAA...CCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
3UTR CAA 90 bp CACTGCGCATTGATTCGCCTTCTGGCTCTCGATGACCTGCTCCAGTaGGGTGTCAGGGATACTTCTGCCAAGTTCCATGAAATCATCCCA +
Preference number: 2 (lower is better)
Translates to: HCALIRLLALDDLLQ*GVRDTSAKFHEIIP
Trigger: TGGGATGATTTCATGGAACTTGGCAGAAGTATCCCTGACACCCAACTGGAGCAGGTCATCGAGAGCCAGAAGGCGAATCAATGCGCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
3UTR-3UTR GCA 90 bp GACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGGAAGGGTTTCCCAGTTaGTTCCAGGCAGGTGAGTTG +
Preference number: 2 (lower is better)
Translates to: DLLEGFPSCFQAGELIWGEGFPS*FQAGEL
Trigger: CAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTC...CCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
3UTR-3UTR TCA 90 bp AGGTTCTCCGCTCATCTGATTCATCTCACACTTCAGCGTCAGCAACATGCTCAGTATGCCTGTGGTCCCTaGAGTGTAGATGAGCACTGC +
Preference number: 2 (lower is better)
Translates to: RFSAHLIHLTLQRQQHAQYACGP*SVDEHC
Trigger: GCAGTGCTCATCTACACTTCAGGGACCACAGGCATA...CTGAGCATGTTGCTGACGCTGAAGTGTGAGATGAATCAGATGAGCGGAGAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681479.1
3UTR-3UTR TCA 90 bp AGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGTTGCTTCCAGGCAGGTaGGTTGATTTGGGGGTCCAG +
Preference number: 2 (lower is better)
Translates to: SRLPNRLPWSHDLKVLRKLLPGR*VDLGVQ
Trigger: CTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAA...CTTTCTAAGGACCTTCAAGTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
3UTR-3UTR GCA 90 bp GCCCACACGAATGCCTTCTTCTTCAAGCCCATGGACTTGGCACTATTTTTCTTCGAAGGGTTTCCCAGTTaGTTCCAGGCAGGTGAGTTG +
Preference number: 2 (lower is better)
Translates to: AHTNAFFFKPMDLALFFFEGFPS*FQAGEL
Trigger: CAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTC...GAAGAAAAATAGTGCCAAGTCCATGGGCTTGAAGAAGAAGGCATTCGTGTGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681479.1
3UTR-3UTR CCA 90 bp GAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTTCTGTGCATTGTTCATaGCTTCCTGGTTCACAGCAT +
Preference number: 2 (lower is better)
Translates to: EGFPSCFQAGELIWGSSSSVHCS*LPGSQH
Trigger: ATGCTGTGAACCAGGAAGCCATGAACAATGCACAGA...AGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590132.1
ENST00000681479.1
3UTR-3UTR TCA 90 bp AGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGTCCAGGCAGGTGAGTTaGTTTGGGGGTCCAGTTCTT +
Preference number: 2 (lower is better)
Translates to: SRLPNRLPWSHDLKVLRKSRQVS*FGGPVL
Trigger: AAGAACTGGACCCCCAAATCAACTCACCTGCCTGGA...CTTTCTAAGGACCTTCAAGTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
3UTR-3UTR TCA 90 bp GTAAATCAGGCAGTTTTTAGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACTTGCTTCCAGGCAGGTaGGTTGATTTGGGGGTCCAG +
Preference number: 2 (lower is better)
Translates to: VNQAVFSRLPNRLPWSHDLLPGR*VDLGVQ
Trigger: CTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAA...GTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACTAAAAACTGCCTGATTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
3UTR-3UTR CCA 90 bp TGTTTCTTGCCCACACGAATGCCTTCTTCTTCAAGCCCATGGACTTGGCACTATATGACCTGCTCCAGTTaGGTGTCAGGGATACTTCTG +
Preference number: 2 (lower is better)
Translates to: CFLPTRMPSSSSPWTWHYMTCSS*VSGILL
Trigger: CAGAAGTATCCCTGACACCCAACTGGAGCAGGTCAT...ATAGTGCCAAGTCCATGGGCTTGAAGAAGAAGGCATTCGTGTGGGCAAGAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681479.1
3UTR-3UTR CCA 90 bp GGCCTCGAAGTTCAGCTTGTCCAGAGGTTCTCCGCTCATCTGATTCATCTCACAGCTCTCCACCATAGATaGAAAAGTCCTTCTCCAAGA +
Preference number: 2 (lower is better)
Translates to: GLEVQLVQRFSAHLIHLTALHHR*KSPSPR
Trigger: TCTTGGAGAAGGACTTTTCCATCTATGGTGGAGAGC...TGTGAGATGAATCAGATGAGCGGAGAACCTCTGGACAAGCTGAACTTCGAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681479.1
3UTR-3UTR TCA 90 bp GAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTCAAGAAACTGACCAATaGGGAATGTGGCTTCTTAAA +
Preference number: 2 (lower is better)
Translates to: EGFPSCFQAGELIWGSSSQETDQ*GMWLLK
Trigger: TTTAAGAAGCCACATTCCTCATTGGTCAGTTTCTTG...AGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
3UTR-3UTR TCA 90 bp GTAAATCAGGCAGTTTTTAGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACTCCAGGCAGGTGAGTTaGTTTGGGGGTCCAGTTCTT +
Preference number: 2 (lower is better)
Translates to: VNQAVFSRLPNRLPWSHDSRQVS*FGGPVL
Trigger: AAGAACTGGACCCCCAAATCAACTCACCTGCCTGGA...GTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACTAAAAACTGCCTGATTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
3UTR-3UTR GCA 90 bp GTAAATCAGGCAGTTTTTAGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACGAAGGGTTTCCCAGTTaGTTCCAGGCAGGTGAGTTG +
Preference number: 2 (lower is better)
Translates to: VNQAVFSRLPNRLPWSHDEGFPS*FQAGEL
Trigger: CAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTC...GTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACTAAAAACTGCCTGATTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
3UTR-3UTR CCA 90 bp CTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGCCCAATAGGCTTCCCTaGAGTCATGACTTGAAGGTC +
Preference number: 2 (lower is better)
Translates to: LYYQDLLEGFPSCFQAGEPNRLP*SHDLKV
Trigger: GACCTTCAAGTCATGACTCCAGGGAAGCCTATTGGG...CTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
3UTR-3UTR TCA 90 bp AGTTATTCTGGTTGGATATCGTGTGGGGTCCCGAGCTCTCACTCAACCCATACATTCTGCCAAGTTCCATaGAATCATCCCAAGAGTACA +
Preference number: 2 (lower is better)
Translates to: SYSGWISCGVPSSHSTHTFCQVP*NHPKST
Trigger: TGTACTCTTGGGATGATTTCATGGAACTTGGCAGAA...TGTATGGGTTGAGTGAGAGCTCGGGACCCCACACGATATCCAACCAGAATAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681479.1
3UTR-3UTR TCA 90 bp CACAGCTTAGAAGCCTGTAGTTATTCTGGTTGGATATCGTGTGGGGTCCCGAGCCAAGAAACTGACCAATaGGGAATGTGGCTTCTTAAA +
Preference number: 2 (lower is better)
Translates to: HSLEACSYSGWISCGVPSQETDQ*GMWLLK
Trigger: TTTAAGAAGCCACATTCCTCATTGGTCAGTTTCTTG...GCTCGGGACCCCACACGATATCCAACCAGAATAACTACAGGCTTCTAAGCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681479.1
3UTR-3UTR TCA 90 bp GCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACAGAACAATCAAGAAACTaGCCAATGAGGAATGTGGCT +
Preference number: 2 (lower is better)
Translates to: ALKRMAGSSREHLSNRRTEQSRN*PMRNVA
Trigger: AGCCACATTCCTCATTGGTCAGTTTCTTGATTGTTC...TGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
3UTR-3UTR TCA 90 bp CTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGGAATGTGGCTTCTTATCCAGGCAGGTGAGTTaGTTTGGGGGTCCAGTTCTT +
Preference number: 2 (lower is better)
Translates to: LSNRRTIKKLTNEECGFLSRQVS*FGGPVL
Trigger: AAGAACTGGACCCCCAAATCAACTCACCTGCCTGGA...TAAGAAGCCACATTCCTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
3UTR-3UTR CCA 90 bp AGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATGAGGTCTTCATTGGCAGTCTGTACTaGATGATCGCTTTTAGGGGC +
Preference number: 2 (lower is better)
Translates to: SRESFYLEQHFTYCNEVFIGSLY*MIAFRG
Trigger: GCCCCTAAAAGCGATCATCCAGTACAGACTGCCAAT...GAAGACCTCATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681479.1
3UTR-3UTR CCA 90 bp CTGAAGTGCTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCCCAATAGGCTTCCCTaGAGTCATGACTTGAAGGTC +
Preference number: 2 (lower is better)
Translates to: LKCFIIRTYWKGFPVASRPNRLP*SHDLKV
Trigger: GACCTTCAAGTCATGACTCCAGGGAAGCCTATTGGG...CCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAGCACTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
3UTR-3UTR CCA 90 bp GTAAATCAGGCAGTTTTTAGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACCCCAATAGGCTTCCCTaGAGTCATGACTTGAAGGTC +
Preference number: 2 (lower is better)
Translates to: VNQAVFSRLPNRLPWSHDPNRLP*SHDLKV
Trigger: GACCTTCAAGTCATGACTCCAGGGAAGCCTATTGGG...GTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACTAAAAACTGCCTGATTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
3UTR-3UTR TCA 90 bp GACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGGTGATTTTATTGCTTTaGAACGTATGGCAGGTTCTT +
Preference number: 2 (lower is better)
Translates to: DLLEGFPSCFQAGELIWGVILLL*NVWQVL
Trigger: AAGAACCTGCCATACGTTTCAAAGCAATAAAATCAC...CCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
3UTR-3UTR TCA 90 bp CACAGCTTAGAAGCCTGTAGTTATTCTGGTTGGATATCGTGTGGGGTCCCGAGCGTGATTTTATTGCTTTaGAACGTATGGCAGGTTCTT +
Preference number: 2 (lower is better)
Translates to: HSLEACSYSGWISCGVPSVILLL*NVWQVL
Trigger: AAGAACCTGCCATACGTTTCAAAGCAATAAAATCAC...GCTCGGGACCCCACACGATATCCAACCAGAATAACTACAGGCTTCTAAGCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681479.1
3UTR-3UTR TCA 90 bp TGTTTCTTGCCCACACGAATGCCTTCTTCTTCAAGCCCATGGACTTGGCACTATCCTGGAGTCATGACTTaGAGGTCCTTAGAAAGATAT +
Preference number: 2 (lower is better)
Translates to: CFLPTRMPSSSSPWTWHYPGVMT*RSLERY
Trigger: ATATCTTTCTAAGGACCTTCAAGTCATGACTCCAGG...ATAGTGCCAAGTCCATGGGCTTGAAGAAGAAGGCATTCGTGTGGGCAAGAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681479.1
3UTR-3UTR GCA 90 bp GTAAATCAGGCAGTTTTTAGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACAGTGTAGATGAGCACTaGGCATTGATTCGCCTTCTG +
Preference number: 2 (lower is better)
Translates to: VNQAVFSRLPNRLPWSHDSVDEH*ALIRLL
Trigger: CAGAAGGCGAATCAATGCGCAGTGCTCATCTACACT...GTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACTAAAAACTGCCTGATTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681479.1
3UTR-3UTR GCA 90 bp GTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGAAACCTTTTCAATCCTCTGTaGATTGTTCATGGCTTCCTG +
Preference number: 2 (lower is better)
Translates to: VWQVLLGSTSPTDEQSRNLFNPL*IVHGFL
Trigger: CAGGAAGCCATGAACAATGCACAGAGGATTGAAAAG...GTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590132.1
ENST00000681479.1
3UTR-3UTR CCA 90 bp AGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGGCAGGTGAGTTGATTTaGGGGTCCAGTTCTTCAAAT +
Preference number: 2 (lower is better)
Translates to: SRLPNRLPWSHDLKVLRKAGELI*GSSSSN
Trigger: ATTTGAAGAACTGGACCCCCAAATCAACTCACCTGC...CTTTCTAAGGACCTTCAAGTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
3UTR-3UTR CCA 90 bp GAACAGCTGAGAGCAGCTCCATCAAAGCAGTCAGTGGTACATGTGATCAATTTGGCAGGTGAGTTGATTTaGGGGTCCAGTTCTTCAAAT +
Preference number: 2 (lower is better)
Translates to: EQLRAAPSKQSVVHVINLAGELI*GSSSSN
Trigger: ATTTGAAGAACTGGACCCCCAAATCAACTCACCTGC...CAAATTGATCACATGTACCACTGACTGCTTTGATGGAGCTGCTCTCAGCTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681479.1
3UTR-3UTR CCA 90 bp AGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGGCTCTCCACCATAGATaGAAAAGTCCTTCTCCAAGA +
Preference number: 2 (lower is better)
Translates to: SRLPNRLPWSHDLKVLRKALHHR*KSPSPR
Trigger: TCTTGGAGAAGGACTTTTCCATCTATGGTGGAGAGC...CTTTCTAAGGACCTTCAAGTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590132.1
ENST00000681479.1
3UTR-3UTR TCA 90 bp AGTGCTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGGAACAATCAAGAAACTaGCCAATGAGGAATGTGGCT +
Preference number: 2 (lower is better)
Translates to: SALLSGLIGRVSQLLPGREQSRN*PMRNVA
Trigger: AGCCACATTCCTCATTGGTCAGTTTCTTGATTGTTC...CCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAGCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
3UTR-3UTR TCA 90 bp CTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGCCTGGAGTCATGACTTaGAGGTCCTTAGAAAGATAT +
Preference number: 2 (lower is better)
Translates to: LYYQDLLEGFPSCFQAGEPGVMT*RSLERY
Trigger: ATATCTTTCTAAGGACCTTCAAGTCATGACTCCAGG...CTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
3UTR-3UTR TCA 90 bp GAAGTGCTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAAGTCCTTCTCCAAGATaGCCCACTTTTCAATCCTCT +
Preference number: 2 (lower is better)
Translates to: EVLYYQDLLEGFPSCFQASPSPR*PTFQSS
Trigger: AGAGGATTGAAAAGTGGGTCATCTTGGAGAAGGACT...TGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAGCACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590132.1
ENST00000681479.1
3UTR-3UTR CCA 90 bp TCCAGTTGGGTGTCAGGGATACTTCTGCCAAGTTCCATGAAATCATCCCAAGAGGTTGTTCTTCTTCATTaGCAGTCTGTACTGGATGAT +
Preference number: 2 (lower is better)
Translates to: SSWVSGILLPSSMKSSQEVVLLH*QSVLDD
Trigger: ATCATCCAGTACAGACTGCCAATGAAGAAGAACAAC...CTCTTGGGATGATTTCATGGAACTTGGCAGAAGTATCCCTGACACCCAACTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
3UTR-3UTR CCA 90 bp GAGCACCTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGGAATGTGGCGTTGTTCTTCTTCATTaGCAGTCTGTACTGGATGAT +
Preference number: 2 (lower is better)
Translates to: EHLSNRRTIKKLTNEECGVVLLH*QSVLDD
Trigger: ATCATCCAGTACAGACTGCCAATGAAGAAGAACAAC...GCCACATTCCTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681479.1
3UTR-3UTR CCA 90 bp GAGCACCTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGGAATGTGGCATTATCAGGACTTATTaGAAGGGTTTCCCAGTTGCT +
Preference number: 2 (lower is better)
Translates to: EHLSNRRTIKKLTNEECGIIRTY*KGFPVA
Trigger: AGCAACTGGGAAACCCTTCCAATAAGTCCTGATAAT...GCCACATTCCTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
3UTR-3UTR CCA 90 bp GAAGTGCTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCATCTGTGCATTGTTCATaGCTTCCTGGTTCACAGCAT +
Preference number: 2 (lower is better)
Translates to: EVLYYQDLLEGFPSCFQASVHCS*LPGSQH
Trigger: ATGCTGTGAACCAGGAAGCCATGAACAATGCACAGA...TGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAGCACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590132.1
ENST00000681479.1
3UTR-3UTR TCA 90 bp AGTGCTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGCAAGAAACTGACCAATaGGGAATGTGGCTTCTTAAA +
Preference number: 2 (lower is better)
Translates to: SALLSGLIGRVSQLLPGRQETDQ*GMWLLK
Trigger: TTTAAGAAGCCACATTCCTCATTGGTCAGTTTCTTG...CCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAGCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
3UTR-3UTR TCA 90 bp AGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGCAAGAAACTGACCAATaGGGAATGTGGCTTCTTAAA +
Preference number: 2 (lower is better)
Translates to: SRLPNRLPWSHDLKVLRKQETDQ*GMWLLK
Trigger: TTTAAGAAGCCACATTCCTCATTGGTCAGTTTCTTG...CTTTCTAAGGACCTTCAAGTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
3UTR-3UTR TCA 90 bp CTGAAGTGCTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGGAACAATCAAGAAACTaGCCAATGAGGAATGTGGCT +
Preference number: 2 (lower is better)
Translates to: LKCFIIRTYWKGFPVASREQSRN*PMRNVA
Trigger: AGCCACATTCCTCATTGGTCAGTTTCTTGATTGTTC...CCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAGCACTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
3UTR-3UTR TCA 90 bp GAAGTGCTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGAACAATCAAGAAACTaGCCAATGAGGAATGTGGCT +
Preference number: 2 (lower is better)
Translates to: EVLYYQDLLEGFPSCFQAEQSRN*PMRNVA
Trigger: AGCCACATTCCTCATTGGTCAGTTTCTTGATTGTTC...TGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAGCACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
3UTR-3UTR TCA 90 bp GAGCACCTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGGAATGTGGCGTGATTTTATTGCTTTaGAACGTATGGCAGGTTCTT +
Preference number: 2 (lower is better)
Translates to: EHLSNRRTIKKLTNEECGVILLL*NVWQVL
Trigger: AAGAACCTGCCATACGTTTCAAAGCAATAAAATCAC...GCCACATTCCTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
3UTR-3UTR CCA 90 bp TGGGTGTCAGGGATACTTCTGCCAAGTTCCATGAAATCATCCCAAGAGTACAAGGTTGTTCTTCTTCATTaGCAGTCTGTACTGGATGAT +
Preference number: 2 (lower is better)
Translates to: WVSGILLPSSMKSSQEYKVVLLH*QSVLDD
Trigger: ATCATCCAGTACAGACTGCCAATGAAGAAGAACAAC...CTTGTACTCTTGGGATGATTTCATGGAACTTGGCAGAAGTATCCCTGACACCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
3UTR-3UTR CCA 90 bp AGTGCTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGATTATCAGGACTTATTaGAAGGGTTTCCCAGTTGCT +
Preference number: 2 (lower is better)
Translates to: SALLSGLIGRVSQLLPGRIIRTY*KGFPVA
Trigger: AGCAACTGGGAAACCCTTCCAATAAGTCCTGATAAT...CCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAGCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
3UTR-3UTR TCA 90 bp GTAAATCAGGCAGTTTTTAGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACCAAGAAACTGACCAATaGGGAATGTGGCTTCTTAAA +
Preference number: 2 (lower is better)
Translates to: VNQAVFSRLPNRLPWSHDQETDQ*GMWLLK
Trigger: TTTAAGAAGCCACATTCCTCATTGGTCAGTTTCTTG...GTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACTAAAAACTGCCTGATTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
3UTR-3UTR TCA 90 bp TCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGGTGATTTTATTGCTTTaGAACGTATGGCAGGTTCTT +
Preference number: 2 (lower is better)
Translates to: SSREHLSNRRTIKKLTNEVILLL*NVWQVL
Trigger: AAGAACCTGCCATACGTTTCAAAGCAATAAAATCAC...CTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
3UTR-3UTR CCA 90 bp GTAAATCAGGCAGTTTTTAGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACATTATCAGGACTTATTaGAAGGGTTTCCCAGTTGCT +
Preference number: 2 (lower is better)
Translates to: VNQAVFSRLPNRLPWSHDIIRTY*KGFPVA
Trigger: AGCAACTGGGAAACCCTTCCAATAAGTCCTGATAAT...GTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACTAAAAACTGCCTGATTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
3UTR CAA 90 bp CATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTATTGCTTaGAAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGA +
Preference number: 2 (lower is better)
Translates to: HDLKVLRKIYSDFIA*KRMAGSSREHLSNR
Trigger: TCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
3UTR-3UTR TCA 90 bp TGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTATTGCTTTGTCCCTGAAGTGTAGATaGGCACTGCGCATTGATTCG +
Preference number: 2 (lower is better)
Translates to: WSHDLKVLRKIYSDFIALSLKCR*ALRIDS
Trigger: CGAATCAATGCGCAGTGCTCATCTACACTTCAGGGA...CAAAGCAATAAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681479.1
3UTR-3UTR TCA 90 bp GTAAATCAGGCAGTTTTTAGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACGTGATTTTATTGCTTTaGAACGTATGGCAGGTTCTT +
Preference number: 2 (lower is better)
Translates to: VNQAVFSRLPNRLPWSHDVILLL*NVWQVL
Trigger: AAGAACCTGCCATACGTTTCAAAGCAATAAAATCAC...GTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACTAAAAACTGCCTGATTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
3UTR CAA 90 bp TCCTGCAATCCACGTGATCATGTCACACAAACTGAATGTTTTCATTaGTTCATTTCTTATCTGTTCCCAAGGTCCAGATTGAGTCTGTCT +
Preference number: 2 (lower is better)
Translates to: SCNPRDHVTQTECFH*FISYLFPRSRLSLS
Trigger: AGACAGACTCAATCTGGACCTTGGGAACAGATAAGAAATGAACAAATGAAAACATTCAGTTTGTGTGACATGATCACGTGGATTGCAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587227.1
3UTR-3UTR TCA 90 bp ATATACAGTGATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACCCTGGAGTCATGACTTaGAGGTCCTTAGAAAGATAT +
Preference number: 2 (lower is better)
Translates to: IYSDFIALKRMAGSSREHPGVMT*RSLERY
Trigger: ATATCTTTCTAAGGACCTTCAAGTCATGACTCCAGG...GTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATCACTGTATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
3UTR-3UTR CCA 90 bp TTTCATTTGTTCATTTCTTATCTGTTCCCAAGGTCCAGATTGAGTCTGTCTTGTTGTTTCCCCTGCTCCTaGAATATTCCCCAGTACATA +
Preference number: 2 (lower is better)
Translates to: FHLFISYLFPRSRLSLSCCFPCS*NIPQYI
Trigger: TATGTACTGGGGAATATTCCAGGAGCAGGGGAAACA...ACAAGACAGACTCAATCTGGACCTTGGGAACAGATAAGAAATGAACAAATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587227.1
3UTR-3UTR TCA 90 bp TGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTATTGCTTTGTTTCACTTATTGCAATaGGGTCTTCCTGCTGAAGGC +
Preference number: 2 (lower is better)
Translates to: WSHDLKVLRKIYSDFIALFHLLQ*GLPAEG
Trigger: GCCTTCAGCAGGAAGACCTCATTGCAATAAGTGAAA...CAAAGCAATAAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
3UTR-3UTR TCA 90 bp CCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTATTGCTCAAGAAACTGACCAATaGGGAATGTGGCTTCTTAAA +
Preference number: 2 (lower is better)
Translates to: PWSHDLKVLRKIYSDFIAQETDQ*GMWLLK
Trigger: TTTAAGAAGCCACATTCCTCATTGGTCAGTTTCTTG...AGCAATAAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
3UTR CAA 90 bp GCAGTTTTTAGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACTaGAAGGTCCTTAGAAAGATATACAGTGATTTTATTGCTTTGAAA +
Preference number: 2 (lower is better)
Translates to: AVFSRLPNRLPWSHD*KVLRKIYSDFIALK
Trigger: TTTCAAAGCAATAAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACTAAAAACTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
3UTR TCA 72 bp CTCCCTTGGGTATGCCTGTGGTCCCTGAAGTGTAGATaGGCACTGCGCATTGATTCGCCTTCTGGCTCTCGA +
Preference number: 3 (lower is better)
Translates to: LPWVCLWSLKCR*ALRIDSPSGSR
Trigger: TCGAGAGCCAGAAGGCGAATCAATGCGCAGTGCTCATCTACACTTCAGGGACCACAGGCATACCCAAGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592677.5
ENST00000681479.1
3UTR TCA 72 bp ACTGAGCATCACTCCCTTGGGTATGCCTGTGGTCCCTaGAGTGTAGATGAGCACTGCGCATTGATTCGCCTT +
Preference number: 3 (lower is better)
Translates to: TEHHSLGYACGP*SVDEHCALIRL
Trigger: AAGGCGAATCAATGCGCAGTGCTCATCTACACTTCAGGGACCACAGGCATACCCAAGGGAGTGATGCTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592677.5
ENST00000681479.1
3UTR-3UTR CAA 90 bp GCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACATCCTGGTTCACAGCATaGATGCCTTGCTGGATGGCC +
Preference number: 3 (lower is better)
Translates to: ALKRMAGSSREHLSNRRTSWFTA*MPCWMA
Trigger: GGCCATCCAGCAAGGCATCAATGCTGTGAACCAGGA...TGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590132.1
ENST00000681479.1
3UTR-3UTR CAA 90 bp GAGCACCTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGGAATGTGGCTCCTGGTTCACAGCATaGATGCCTTGCTGGATGGCC +
Preference number: 3 (lower is better)
Translates to: EHLSNRRTIKKLTNEECGSWFTA*MPCWMA
Trigger: GGCCATCCAGCAAGGCATCAATGCTGTGAACCAGGA...GCCACATTCCTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590132.1
ENST00000681479.1
3UTR TCA 72 bp TCGAAGTTCAGCTTGTCCAGAGGTTCTCCGCTCATCTaGTTCATCTCACACTTCAGCGTCAGCAACATGCTC +
Preference number: 3 (lower is better)
Translates to: SKFSLSRGSPLI*FISHFSVSNML
Trigger: GAGCATGTTGCTGACGCTGAAGTGTGAGATGAATCAGATGAGCGGAGAACCTCTGGACAAGCTGAACTTCGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681479.1
3UTR-3UTR CAA 90 bp GTAGATGAGCACTGCGCATTGATTCGCCTTCTGGCTCTCGATGACCTGCTCCAGCAAGAGTACAAGTTGTaGTTCTTCTTCATTGGCAGT +
Preference number: 3 (lower is better)
Translates to: VDEHCALIRLLALDDLLQQEYKL*FFFIGS
Trigger: ACTGCCAATGAAGAAGAACAACAACTTGTACTCTTG...CTGGAGCAGGTCATCGAGAGCCAGAAGGCGAATCAATGCGCAGTGCTCATCTAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
3UTR-3UTR CAA 90 bp TCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGGATGACCTGCTCCAGTaGGGTGTCAGGGATACTTCT +
Preference number: 3 (lower is better)
Translates to: SSREHLSNRRTIKKLTNEDDLLQ*GVRDTS
Trigger: AGAAGTATCCCTGACACCCAACTGGAGCAGGTCATC...CTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681479.1
3UTR-3UTR CAA 90 bp TTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCCCCTGGAGTCATGACTaGAAGGTCCTTAGAAAGATA +
Preference number: 3 (lower is better)
Translates to: LLEGFPSCFQAGELIWGSPWSHD*KVLRKI
Trigger: TATCTTTCTAAGGACCTTCAAGTCATGACTCCAGGG...GGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
3UTR TCA 72 bp CTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTaGGTTGATTTGGGGGTCCAGTTCTTCAAATCTGTG +
Preference number: 3 (lower is better)
Translates to: LIGRVSQLLPGR*VDLGVQFFKSV
Trigger: CACAGATTTGAAGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
3UTR GCA 72 bp AGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTaGAATGAGGTCTTCCTGCTGAAGGCTAGCTCTCCA +
Preference number: 3 (lower is better)
Translates to: RESFYLEQHFTY*NEVFLLKASSP
Trigger: TGGAGAGCTAGCCTTCAGCAGGAAGACCTCATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590132.1
3UTR CCA 72 bp CACTTTTCAATCCTCTGTGCATTGTTCATGGCTTCCTaGTTCACAGCATTGATGCCTTGCTGGATGGCCTTG +
Preference number: 3 (lower is better)
Translates to: HFSILCALFMAS*FTALMPCWMAL
Trigger: CAAGGCCATCCAGCAAGGCATCAATGCTGTGAACCAGGAAGCCATGAACAATGCACAGAGGATTGAAAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590132.1
ENST00000681479.1
3UTR CCA 72 bp CAGAGGCAGATCTCCCCAATGCCATCCTTGTTCTGCTaGAACAGCATATTCTTACACCCAGTCAAGATCTTG +
Preference number: 3 (lower is better)
Translates to: QRQISPMPSLFC*NSIFLHPVKIL
Trigger: CAAGATCTTGACTGGGTGTAAGAATATGCTGTTCCAGCAGAACAAGGATGGCATTGGGGAGATCTGCCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681479.1
3UTR-3UTR CAA 90 bp TTGATTCGCCTTCTGGCTCTCGATGACCTGCTCCAGTTGGGTGTCAGGGATACTCAAGAGTACAAGTTGTaGTTCTTCTTCATTGGCAGT +
Preference number: 3 (lower is better)
Translates to: LIRLLALDDLLQLGVRDTQEYKL*FFFIGS
Trigger: ACTGCCAATGAAGAAGAACAACAACTTGTACTCTTG...AGTATCCCTGACACCCAACTGGAGCAGGTCATCGAGAGCCAGAAGGCGAATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
3UTR-3UTR CAA 90 bp GCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACACCCTGGAGTCATGACTaGAAGGTCCTTAGAAAGATA +
Preference number: 3 (lower is better)
Translates to: ALKRMAGSSREHLSNRRTPWSHD*KVLRKI
Trigger: TATCTTTCTAAGGACCTTCAAGTCATGACTCCAGGG...TGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
3UTR-3UTR CAA 90 bp GTAAATCAGGCAGTTTTTAGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACTTCCAGGCAGGTGAGTaGATTTGGGGGTCCAGTTCT +
Preference number: 3 (lower is better)
Translates to: VNQAVFSRLPNRLPWSHDFQAGE*IWGSSS
Trigger: AGAACTGGACCCCCAAATCAACTCACCTGCCTGGAA...GTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACTAAAAACTGCCTGATTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
3UTR-3UTR CAA 90 bp GACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTATTATCAGGACTTATaGGAAGGGTTTCCCAGTTGC +
Preference number: 3 (lower is better)
Translates to: DLLEGFPSCFQAGELIWGYYQDL*EGFPSC
Trigger: GCAACTGGGAAACCCTTCCAATAAGTCCTGATAATA...CCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
3UTR-3UTR CAA 90 bp GAAGTGCTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCACACAGCATTGATGCCTaGCTGGATGGCCTTGTAGAC +
Preference number: 3 (lower is better)
Translates to: EVLYYQDLLEGFPSCFQAHSIDA*LDGLVD
Trigger: GTCTACAAGGCCATCCAGCAAGGCATCAATGCTGTG...TGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAGCACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590132.1
ENST00000681479.1
3UTR-3UTR CAA 90 bp CCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTTCAAATCTGCAAGAGTACAAGTTGTaGTTCTTCTTCATTGGCAGT +
Preference number: 3 (lower is better)
Translates to: PSCFQAGELIWGSSSSNLQEYKL*FFFIGS
Trigger: ACTGCCAATGAAGAAGAACAACAACTTGTACTCTTG...CAGATTTGAAGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681479.1
3UTR-3UTR CAA 90 bp TTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTTCAAATCCCTGGAGTCATGACTaGAAGGTCCTTAGAAAGATA +
Preference number: 3 (lower is better)
Translates to: FPSCFQAGELIWGSSSSNPWSHD*KVLRKI
Trigger: TATCTTTCTAAGGACCTTCAAGTCATGACTCCAGGG...ATTTGAAGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
3UTR TCA 72 bp GAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATaGGGTCTTCCTGCTGAAGGCATCAGAACAGCTGAG +
Preference number: 3 (lower is better)
Translates to: ELLPRAAFHLLQ*GLPAEGIRTAE
Trigger: CTCAGCTGTTCTGATGCCTTCAGCAGGAAGACCTCATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
3UTR GCA 72 bp AGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTaGAATGAGGTCTTCCTGCTGAAGGCATCAGAACAG +
Preference number: 3 (lower is better)
Translates to: RESFYLEQHFTY*NEVFLLKASEQ
Trigger: CTGTTCTGATGCCTTCAGCAGGAAGACCTCATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
3UTR GCA 72 bp CTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTaGTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGT +
Preference number: 3 (lower is better)
Translates to: LYYQDLLEGFPS*FQAGELIWGSS
Trigger: ACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
3UTR GCA 72 bp GTTGACCTTGAAGCCAATGTTTCTTGCCCACACGAATaGCTTCTTCTTCAAGCCCATGGACTTGGCACTATT +
Preference number: 3 (lower is better)
Translates to: VDLEANVSCPHE*LLLQAHGLGTI
Trigger: AATAGTGCCAAGTCCATGGGCTTGAAGAAGAAGGCATTCGTGTGGGCAAGAAACATTGGCTTCAAGGTCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681479.1
3UTR TCA 72 bp CCAGTTGGGTGTCAGGGATACTTCTGCCAAGTTCCATaGAATCATCCCAAGAGTACAAGTTGTTGTTCTTCT +
Preference number: 3 (lower is better)
Translates to: PVGCQGYFCQVP*NHPKSTSCCSS
Trigger: AGAAGAACAACAACTTGTACTCTTGGGATGATTTCATGGAACTTGGCAGAAGTATCCCTGACACCCAACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
3UTR-3UTR CAA 90 bp GTAAATCAGGCAGTTTTTAGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACTATTATCAGGACTTATaGGAAGGGTTTCCCAGTTGC +
Preference number: 3 (lower is better)
Translates to: VNQAVFSRLPNRLPWSHDYYQDL*EGFPSC
Trigger: GCAACTGGGAAACCCTTCCAATAAGTCCTGATAATA...GTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACTAAAAACTGCCTGATTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
3UTR CCA 72 bp CAGGCAGTTTTTAGTAGACTTCCCAATAGGCTTCCCTaGAGTCATGACTTGAAGGTCCTTAGAAAGATATAC +
Preference number: 3 (lower is better)
Translates to: QAVFSRLPNRLP*SHDLKVLRKIY
Trigger: GTATATCTTTCTAAGGACCTTCAAGTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACTAAAAACTGCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
3UTR GCA 72 bp TCATCTGATTCATCTCACACTTCAGCGTCAGCAACATaGTCAGAAACTTCAGTTTATCTCCTACTAACATGG +
Preference number: 3 (lower is better)
Translates to: SSDSSHTSASAT*SETSVYLLLTW
Trigger: CCATGTTAGTAGGAGATAAACTGAAGTTTCTGAGCATGTTGCTGACGCTGAAGTGTGAGATGAATCAGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681479.1
3UTR TCA 72 bp GTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACTTaGAGGTCCTTAGAAAGATATACAGTGATTTTATTG +
Preference number: 3 (lower is better)
Translates to: VDFPIGFPGVMT*RSLERYTVILL
Trigger: CAATAAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCAGGGAAGCCTATTGGGAAGTCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
3UTR-3UTR CAA 90 bp TTTCTTGTAAATCAGGCAGTTTTTAGTAGACTTCCCAATAGGCTTCCCTGGAGTAGTGATTTTATTGCTTaGAAACGTATGGCAGGTTCT +
Preference number: 3 (lower is better)
Translates to: FLVNQAVFSRLPNRLPWSSDFIA*KRMAGS
Trigger: AGAACCTGCCATACGTTTCAAAGCAATAAAATCACT...ACTCCAGGGAAGCCTATTGGGAAGTCTACTAAAAACTGCCTGATTTACAAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR GCA 90 bp CGCCTTCTGGCTCTCGATGACCTGCTCCAGTTGGGTGTCAGGGATACTTCTGCCTGGCTCTCGATGACCTaGTCCAGTTGGGTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: RLLALDDLLQLGVRDTSAWLSMT*SSWVSG
Trigger: CCCTGACACCCAACTGGAGCAGGTCATCGAGAGCCA...GGCAGAAGTATCCCTGACACCCAACTGGAGCAGGTCATCGAGAGCCAGAAGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR CCA 90 bp CGCCTTCTGGCTCTCGATGACCTGCTCCAGTTGGGTGTCAGGGATACTTCTGCCAGGCAGGAGGATGGGTaGTTTCCCTCCACAACAGGC +
Preference number: 4 (lower is better)
Translates to: RLLALDDLLQLGVRDTSARQEDG*FPSTTG
Trigger: GCCTGTTGTGGAGGGAAACCACCCATCCTCCTGCCT...GGCAGAAGTATCCCTGACACCCAACTGGAGCAGGTCATCGAGAGCCAGAAGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592677.5
CDS-3UTR CCA 90 bp CGCCTTCTGGCTCTCGATGACCTGCTCCAGTTGGGTGTCAGGGATACTTCTGCCCCACAGCACTGGAGCTaGGACATCTGGTCACTCAGG +
Preference number: 4 (lower is better)
Translates to: RLLALDDLLQLGVRDTSAPQHWS*DIWSLR
Trigger: CCTGAGTGACCAGATGTCCCAGCTCCAGTGCTGTGG...GGCAGAAGTATCCCTGACACCCAACTGGAGCAGGTCATCGAGAGCCAGAAGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587617.1
CDS-3UTR GCA 90 bp CGCCTTCTGGCTCTCGATGACCTGCTCCAGTTGGGTGTCAGGGATACTTCTGCCGGTGTGCAGAAACCATaGTCCACAGCACTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: RLLALDDLLQLGVRDTSAGVQKP*STALEL
Trigger: CAGCTCCAGTGCTGTGGAGCATGGTTTCTGCACACC...GGCAGAAGTATCCCTGACACCCAACTGGAGCAGGTCATCGAGAGCCAGAAGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587617.1
3UTR CAA 72 bp ACGGTGGATGCCTGGCTGCCCAGACCCCGACAGAAGTaGATGGCCTCGAAGTTCAGCTTGTCCAGAGGTTCT +
Preference number: 4 (lower is better)
Translates to: TVDAWLPRPRQK*MASKFSLSRGS
Trigger: AGAACCTCTGGACAAGCTGAACTTCGAGGCCATCAACTTCTGTCGGGGTCTGGGCAGCCAGGCATCCACCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681479.1
CDS-3UTR TCA 90 bp CCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTTCAAATCTGTCCGTCCAGCCAGGATaGTGGTGGTGGTGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: PSCFQAGELIWGSSSSNLSVQPG*WWWWEA
Trigger: TGCCTCCCACCACCACCATCATCCTGGCTGGACGGA...CAGATTTGAAGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
CDS-3UTR GCA 90 bp CTGGTTCACAGCATTGATGCCTTGCTGGATGGCCTTGTAGACCAGGGGGTCTTGCTCAGTCACGGTGGATaGCTGGCTTCAGCGTCAGCA +
Preference number: 4 (lower is better)
Translates to: LVHSIDALLDGLVDQGVLLSHGG*LASASA
Trigger: TGCTGACGCTGAAGCCAGGCATCCACCGTGACTGAG...CAAGACCCCCTGGTCTACAAGGCCATCCAGCAAGGCATCAATGCTGTGAACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590132.1
CDS-3UTR CCA 90 bp GAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTGTGGTTCTGGCCATCTaGCAAGGCACCTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: EGFPSCFQAGELIWGSSSVVLAI*QGTWSW
Trigger: CCAGCTCCAGGTGCCTTGCCAGATGGCCAGAACCAC...AGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000681479.1
CDS-3UTR CCA 90 bp GCTCTCGATGACCTGCTCCAGTTGGGTGTCAGGGATACTTCTGCCAAGTTCCATGTGGTTCTGGCCATCTaGCAAGGCACCTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: ALDDLLQLGVRDTSAKFHVVLAI*QGTWSW
Trigger: CCAGCTCCAGGTGCCTTGCCAGATGGCCAGAACCAC...ATGGAACTTGGCAGAAGTATCCCTGACACCCAACTGGAGCAGGTCATCGAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592677.5
ENST00000681479.1
CDS-3UTR CCA 90 bp CGCCTTCTGGCTCTCGATGACCTGCTCCAGTTGGGTGTCAGGGATACTTCTGCCAGGATACCAACTCCGTaGAAACGCTCCAAACCCAGC +
Preference number: 4 (lower is better)
Translates to: RLLALDDLLQLGVRDTSARIPTP*KRSKPS
Trigger: GCTGGGTTTGGAGCGTTTCCACGGAGTTGGTATCCT...GGCAGAAGTATCCCTGACACCCAACTGGAGCAGGTCATCGAGAGCCAGAAGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR CCA 90 bp CTGGTTCACAGCATTGATGCCTTGCTGGATGGCCTTGTAGACCAGGGGGTCTTGCAATCTCAGTCACGGTaGATGCCTGGCTGCCCAGAC +
Preference number: 4 (lower is better)
Translates to: LVHSIDALLDGLVDQGVLQSQSR*MPGCPD
Trigger: GTCTGGGCAGCCAGGCATCCACCGTGACTGAGATTG...CAAGACCCCCTGGTCTACAAGGCCATCCAGCAAGGCATCAATGCTGTGAACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681479.1
3UTR CAA 72 bp GATGCCTTGCTGGATGGCCTTGTAGACCAGGGGGTCTaGCTGCTTCACAATCTCAGTCACGGTGGATGCCTG +
Preference number: 4 (lower is better)
Translates to: DALLDGLVDQGV*LLHNLSHGGCL
Trigger: CAGGCATCCACCGTGACTGAGATTGTGAAGCAGCAAGACCCCCTGGTCTACAAGGCCATCCAGCAAGGCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681479.1
CDS-3UTR TCA 90 bp CGCCTTCTGGCTCTCGATGACCTGCTCCAGTTGGGTGTCAGGGATACTTCTGCCGCAGTCTGTACTGGATaGTCGCTTTTAGGGGCTCTA +
Preference number: 4 (lower is better)
Translates to: RLLALDDLLQLGVRDTSAAVCTG*SLLGAL
Trigger: TAGAGCCCCTAAAAGCGATCATCCAGTACAGACTGC...GGCAGAAGTATCCCTGACACCCAACTGGAGCAGGTCATCGAGAGCCAGAAGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR GCA 90 bp TTGATTCGCCTTCTGGCTCTCGATGACCTGCTCCAGTTGGGTGTCAGGGATACTTGGCTCTCGATGACCTaGTCCAGTTGGGTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: LIRLLALDDLLQLGVRDTWLSMT*SSWVSG
Trigger: CCCTGACACCCAACTGGAGCAGGTCATCGAGAGCCA...AGTATCCCTGACACCCAACTGGAGCAGGTCATCGAGAGCCAGAAGGCGAATCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR CCA 90 bp AGTGTAGATGAGCACTGCGCATTGATTCGCCTTCTGGCTCTCGATGACCTGCTCAACTCGGCAGTCTCTTaGTTGAGGGGCGCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: SVDEHCALIRLLALDDLLNSAVS*LRGAVP
Trigger: TGGGACTGCGCCCCTCAACCAAGAGACTGCCGAGTT...GAGCAGGTCATCGAGAGCCAGAAGGCGAATCAATGCGCAGTGCTCATCTACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681479.1
CDS-3UTR CCA 90 bp AGGTTCTCCGCTCATCTGATTCATCTCACACTTCAGCGTCAGCAACATGCTCAGCCCAGACCGTCCAGCTaGCCCAGATCCCCAGAGTGT +
Preference number: 4 (lower is better)
Translates to: RFSAHLIHLTLQRQQHAQPRPSS*PRSPEC
Trigger: ACACTCTGGGGATCTGGGCCAGCTGGACGGTCTGGG...CTGAGCATGTTGCTGACGCTGAAGTGTGAGATGAATCAGATGAGCGGAGAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681479.1
CDS-3UTR TCA 90 bp GTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGAAACTCCGTCCAGCCAGGATaGTGGTGGTGGTGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: VWQVLLGSTSPTDEQSRNSVQPG*WWWWEA
Trigger: TGCCTCCCACCACCACCATCATCCTGGCTGGACGGA...GTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681525.1
CDS-3UTR TCA 90 bp GAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTATGAGCACTGCGCATTaGTTCGCCTTCTGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: EGFPSCFQAGELIWGSSSMSTAH*FAFWLS
Trigger: CGAGAGCCAGAAGGCGAATCAATGCGCAGTGCTCAT...AGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR TCA 90 bp GAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTGACCCCGACAGAAGTTaGTGGCCTCGAAGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: EGFPSCFQAGELIWGSSSDPDRS*WPRSSA
Trigger: AGCTGAACTTCGAGGCCATCAACTTCTGTCGGGGTC...AGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR GCA 90 bp GCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACAAACCTGAACATGAGCTaGCCCTTCCCAGCCCCCGTC +
Preference number: 4 (lower is better)
Translates to: ALKRMAGSSREHLSNRRTNLNMS*PFPAPV
Trigger: GACGGGGGCTGGGAAGGGGCAGCTCATGTTCAGGTT...TGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681525.1
CDS-3UTR GCA 90 bp GTTCCCAAGGTCCAGATTGAGTCTGTCTTGTTTGCTGCTGTTTCCCCTGCTCCTTGGCTCTCGATGACCTaGTCCAGTTGGGTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: VPKVQIESVLFAAVSPAPWLSMT*SSWVSG
Trigger: CCCTGACACCCAACTGGAGCAGGTCATCGAGAGCCA...AGGAGCAGGGGAAACAGCAGCAAACAAGACAGACTCAATCTGGACCTTGGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587227.1
CDS-3UTR GCA 90 bp GCATTGATTCGCCTTCTGGCTCTCGATGACCTGCTCCAGTTGGGTGTCAGGGATTCACTCCCTTGGGTATaGCTGTGGTCCCTGAAGTGT +
Preference number: 4 (lower is better)
Translates to: ALIRLLALDDLLQLGVRDSLPWV*LWSLKC
Trigger: ACACTTCAGGGACCACAGGCATACCCAAGGGAGTGA...ATCCCTGACACCCAACTGGAGCAGGTCATCGAGAGCCAGAAGGCGAATCAATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592677.5
ENST00000681479.1
CDS-3UTR GCA 90 bp GTAGATGAGCACTGCGCATTGATTCGCCTTCTGGCTCTCGATGACCTGCTCCAGGGCAGATCTCCCCAATaGCATCCTTGTTCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: VDEHCALIRLLALDDLLQGRSPQ*HPCSAG
Trigger: TCCAGCAGAACAAGGATGGCATTGGGGAGATCTGCC...CTGGAGCAGGTCATCGAGAGCCAGAAGGCGAATCAATGCGCAGTGCTCATCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681479.1
CDS-3UTR GCA 90 bp AAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGCGGTGGATGCCTGGCTaGCCAGACCCCGACAGAAGT +
Preference number: 4 (lower is better)
Translates to: KRMAGSSREHLSNRRTIKRWMPG*PDPDRS
Trigger: ACTTCTGTCGGGGTCTGGGCAGCCAGGCATCCACCG...CTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CCA 90 bp GAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTATCTGGCAAGGCACCTaGAGCTGGGACATCTGGTCA +
Preference number: 4 (lower is better)
Translates to: EGFPSCFQAGELIWGSSSIWQGT*SWDIWS
Trigger: TGACCAGATGTCCCAGCTCCAGGTGCCTTGCCAGAT...AGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000681479.1
CDS-3UTR CCA 90 bp AGGTTCTCCGCTCATCTGATTCATCTCACACTTCAGCGTCAGCAACATGCTCAGGTGGTTCTGGCCATCTaGCAAGGCACCTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: RFSAHLIHLTLQRQQHAQVVLAI*QGTWSW
Trigger: CCAGCTCCAGGTGCCTTGCCAGATGGCCAGAACCAC...CTGAGCATGTTGCTGACGCTGAAGTGTGAGATGAATCAGATGAGCGGAGAACCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681479.1
CDS-3UTR CCA 90 bp GAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTGTCATCGGGGTCTCATaGCCTGGTCCGTGTTTGGAT +
Preference number: 4 (lower is better)
Translates to: EGFPSCFQAGELIWGSSSVIGVS*PGPCLD
Trigger: ATCCAAACACGGACCAGGCCATGAGACCCCGATGAC...AGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CCA 90 bp CCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTTCAAATCTGAACTCGGCAGTCTCTTaGTTGAGGGGCGCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: PSCFQAGELIWGSSSSNLNSAVS*LRGAVP
Trigger: TGGGACTGCGCCCCTCAACCAAGAGACTGCCGAGTT...CAGATTTGAAGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CCA 90 bp GCTCTCGATGACCTGCTCCAGTTGGGTGTCAGGGATACTTCTGCCAAGTTCCATTGGTTGGATATCGTGTaGGGTCCCGAGCTCTCACTC +
Preference number: 4 (lower is better)
Translates to: ALDDLLQLGVRDTSAKFHWLDIV*GPELSL
Trigger: GAGTGAGAGCTCGGGACCCCACACGATATCCAACCA...ATGGAACTTGGCAGAAGTATCCCTGACACCCAACTGGAGCAGGTCATCGAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681479.1
CDS-3UTR CCA 90 bp TTGATTCGCCTTCTGGCTCTCGATGACCTGCTCCAGTTGGGTGTCAGGGATACTCATGCTCCACAGCACTaGAGCTGGGACATCTGGTCA +
Preference number: 4 (lower is better)
Translates to: LIRLLALDDLLQLGVRDTHAPQH*SWDIWS
Trigger: TGACCAGATGTCCCAGCTCCAGTGCTGTGGAGCATG...AGTATCCCTGACACCCAACTGGAGCAGGTCATCGAGAGCCAGAAGGCGAATCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587617.1
CDS-3UTR TCA 90 bp CTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTCCGTCCAGCCAGGATaGTGGTGGTGGTGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: LYYQDLLEGFPSCFQAGESVQPG*WWWWEA
Trigger: TGCCTCCCACCACCACCATCATCCTGGCTGGACGGA...CTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
CDS-3UTR TCA 90 bp GTAGATGAGCACTGCGCATTGATTCGCCTTCTGGCTCTCGATGACCTGCTCCAGGCTCCAAACCCAGCTTaGTCAAGGATTTTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: VDEHCALIRLLALDDLLQAPNPA*SRILQP
Trigger: AGGCTGCAAAATCCTTGATCAAGCTGGGTTTGGAGC...CTGGAGCAGGTCATCGAGAGCCAGAAGGCGAATCAATGCGCAGTGCTCATCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR TCA 90 bp GTAGATGAGCACTGCGCATTGATTCGCCTTCTGGCTCTCGATGACCTGCTCCAGGCAGTCTGTACTGGATaGTCGCTTTTAGGGGCTCTA +
Preference number: 4 (lower is better)
Translates to: VDEHCALIRLLALDDLLQAVCTG*SLLGAL
Trigger: TAGAGCCCCTAAAAGCGATCATCCAGTACAGACTGC...CTGGAGCAGGTCATCGAGAGCCAGAAGGCGAATCAATGCGCAGTGCTCATCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR TCA 90 bp GTAGATGAGCACTGCGCATTGATTCGCCTTCTGGCTCTCGATGACCTGCTCCAGTCCCTGAAGTGTAGATaGGCACTGCGCATTGATTCG +
Preference number: 4 (lower is better)
Translates to: VDEHCALIRLLALDDLLQSLKCR*ALRIDS
Trigger: CGAATCAATGCGCAGTGCTCATCTACACTTCAGGGA...CTGGAGCAGGTCATCGAGAGCCAGAAGGCGAATCAATGCGCAGTGCTCATCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR TCA 90 bp GCATTGATTCGCCTTCTGGCTCTCGATGACCTGCTCCAGTTGGGTGTCAGGGATTCCCTGAAGTGTAGATaGGCACTGCGCATTGATTCG +
Preference number: 4 (lower is better)
Translates to: ALIRLLALDDLLQLGVRDSLKCR*ALRIDS
Trigger: CGAATCAATGCGCAGTGCTCATCTACACTTCAGGGA...ATCCCTGACACCCAACTGGAGCAGGTCATCGAGAGCCAGAAGGCGAATCAATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR GCA 90 bp GCTCTCGATGACCTGCTCCAGTTGGGTGTCAGGGATACTTCTGCCAAGTTCCATGGTGTGCAGAAACCATaGTCCACAGCACTGTCACTC +
Preference number: 4 (lower is better)
Translates to: ALDDLLQLGVRDTSAKFHGVQKP*STALSL
Trigger: GAGTGACAGTGCTGTGGAGCATGGTTTCTGCACACC...ATGGAACTTGGCAGAAGTATCCCTGACACCCAACTGGAGCAGGTCATCGAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592677.5
ENST00000681479.1
CDS-3UTR GCA 90 bp AACAGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATGAGGTCCGGTGGATGCCTGGCTaGCCAGACCCCGACAGAAGT +
Preference number: 4 (lower is better)
Translates to: NSRESFYLEQHFTYCNEVRWMPG*PDPDRS
Trigger: ACTTCTGTCGGGGTCTGGGCAGCCAGGCATCCACCG...GACCTCATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR GCA 90 bp GATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACCTCAGTCACGGTGGATaGCTGGCTGCCCAGACCCCG +
Preference number: 4 (lower is better)
Translates to: DFIALKRMAGSSREHLSNLSHGG*LAAQTP
Trigger: CGGGGTCTGGGCAGCCAGGCATCCACCGTGACTGAG...GTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR GCA 90 bp GAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTACCAGGGGGTCTTGCTaGTTCACAATCTCAGTCACG +
Preference number: 4 (lower is better)
Translates to: EGFPSCFQAGELIWGSSSTRGSC*FTISVT
Trigger: CGTGACTGAGATTGTGAAGCAGCAAGACCCCCTGGT...AGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CCA 90 bp TTGATTCGCCTTCTGGCTCTCGATGACCTGCTCCAGTTGGGTGTCAGGGATACTACAGGTAGCCCCTCCTaGAAACCTGAACATGAGCTG +
Preference number: 4 (lower is better)
Translates to: LIRLLALDDLLQLGVRDTTGSPS*KPEHEL
Trigger: CAGCTCATGTTCAGGTTTCCAGGAGGGGCTACCTGT...AGTATCCCTGACACCCAACTGGAGCAGGTCATCGAGAGCCAGAAGGCGAATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587617.1
ENST00000592677.5
CDS-3UTR CCA 90 bp CCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTTCAAATCTGATCTGGCAAGGCACCTaGAGCTGGGACATCTGGTCA +
Preference number: 4 (lower is better)
Translates to: PSCFQAGELIWGSSSSNLIWQGT*SWDIWS
Trigger: TGACCAGATGTCCCAGCTCCAGGTGCCTTGCCAGAT...CAGATTTGAAGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000681479.1
CDS-3UTR CCA 90 bp GTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGAAACGTGGTTCTGGCCATCTaGCAAGGCACCTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: VWQVLLGSTSPTDEQSRNVVLAI*QGTWSW
Trigger: CCAGCTCCAGGTGCCTTGCCAGATGGCCAGAACCAC...GTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp GCATTGATTCGCCTTCTGGCTCTCGATGACCTGCTCCAGTTGGGTGTCAGGGATATGACCTGCTCCAGTTaGGTGTCAGGGATACTTCTG +
Preference number: 4 (lower is better)
Translates to: ALIRLLALDDLLQLGVRDMTCSS*VSGILL
Trigger: CAGAAGTATCCCTGACACCCAACTGGAGCAGGTCAT...ATCCCTGACACCCAACTGGAGCAGGTCATCGAGAGCCAGAAGGCGAATCAATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR CCA 90 bp CTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGCCCAGACCGTCCAGCTaGCCCAGATCCCCAGAGTGT +
Preference number: 4 (lower is better)
Translates to: LYYQDLLEGFPSCFQAGEPRPSS*PRSPEC
Trigger: ACACTCTGGGGATCTGGGCCAGCTGGACGGTCTGGG...CTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CCA 90 bp CGCCTTCTGGCTCTCGATGACCTGCTCCAGTTGGGTGTCAGGGATACTTCTGCCGCTCTCCACCATAGATaGAAAAGTCCTTCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: RLLALDDLLQLGVRDTSAALHHR*KSPSPR
Trigger: TCTTGGAGAAGGACTTTTCCATCTATGGTGGAGAGC...GGCAGAAGTATCCCTGACACCCAACTGGAGCAGGTCATCGAGAGCCAGAAGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681479.1
CDS-3UTR TCA 90 bp GCTCTCGATGACCTGCTCCAGTTGGGTGTCAGGGATACTTCTGCCAAGTTCCATGCTCCAAACCCAGCTTaGTCAAGGATTTTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: ALDDLLQLGVRDTSAKFHAPNPA*SRILQP
Trigger: AGGCTGCAAAATCCTTGATCAAGCTGGGTTTGGAGC...ATGGAACTTGGCAGAAGTATCCCTGACACCCAACTGGAGCAGGTCATCGAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR TCA 90 bp TCGATGACCTGCTCCAGTTGGGTGTCAGGGATACTTCTGCCAAGTTCCATGAAAATGAGCACTGCGCATTaGTTCGCCTTCTGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: SMTCSSWVSGILLPSSMKMSTAH*FAFWLS
Trigger: CGAGAGCCAGAAGGCGAATCAATGCGCAGTGCTCAT...TTTCATGGAACTTGGCAGAAGTATCCCTGACACCCAACTGGAGCAGGTCATCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR TCA 90 bp TTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCTATGCCTGTGGTCCCTaGAGTGTAGATGAGCACTGC +
Preference number: 4 (lower is better)
Translates to: LLEGFPSCFQAGELIWGSYACGP*SVDEHC
Trigger: GCAGTGCTCATCTACACTTCAGGGACCACAGGCATA...GGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR TCA 90 bp GCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACAGACCCCGACAGAAGTTaGTGGCCTCGAAGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: ALKRMAGSSREHLSNRRTDPDRS*WPRSSA
Trigger: AGCTGAACTTCGAGGCCATCAACTTCTGTCGGGGTC...TGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR TCA 90 bp CCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTTCAAATCTGTCCAGGCAGGTGAGTTaGTTTGGGGGTCCAGTTCTT +
Preference number: 4 (lower is better)
Translates to: PSCFQAGELIWGSSSSNLSRQVS*FGGPVL
Trigger: AAGAACTGGACCCCCAAATCAACTCACCTGCCTGGA...CAGATTTGAAGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS-3UTR TCA 90 bp GCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACATTGCTTCCAGGCAGGTaGGTTGATTTGGGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: ALKRMAGSSREHLSNRRTLLPGR*VDLGVQ
Trigger: CTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAA...TGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR GCA 90 bp GTAGATGAGCACTGCGCATTGATTCGCCTTCTGGCTCTCGATGACCTGCTCCAGCTTGATCAAGGATTTTaGAGCCTTCCGACAAGCCTC +
Preference number: 4 (lower is better)
Translates to: VDEHCALIRLLALDDLLQLDQGF*SLPTSL
Trigger: GAGGCTTGTCGGAAGGCTGCAAAATCCTTGATCAAG...CTGGAGCAGGTCATCGAGAGCCAGAAGGCGAATCAATGCGCAGTGCTCATCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR GCA 90 bp GTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGAAACTGGCTCTCGATGACCTaGTCCAGTTGGGTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: VWQVLLGSTSPTDEQSRNWLSMT*SSWVSG
Trigger: CCCTGACACCCAACTGGAGCAGGTCATCGAGAGCCA...GTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR GCA 90 bp GACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGGGCAGATCTCCCCAATaGCATCCTTGTTCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: DLLEGFPSCFQAGELIWGGRSPQ*HPCSAG
Trigger: TCCAGCAGAACAAGGATGGCATTGGGGAGATCTGCC...CCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTC
52% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR GCA 90 bp CTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGGAATGTGGCTTCTTACTCAGTCACGGTGGATaGCTGGCTGCCCAGACCCCG +
Preference number: 4 (lower is better)
Translates to: LSNRRTIKKLTNEECGFLLSHGG*LAAQTP
Trigger: CGGGGTCTGGGCAGCCAGGCATCCACCGTGACTGAG...TAAGAAGCCACATTCCTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR GCA 90 bp GTTCCCAAGGTCCAGATTGAGTCTGTCTTGTTTGCTGCTGTTTCCCCTGCTCCTTGCTGCTGTTTCCCCTaGTCCTGGAATATTCCCCAG +
Preference number: 4 (lower is better)
Translates to: VPKVQIESVLFAAVSPAPCCCFP*SWNIPQ
Trigger: CTGGGGAATATTCCAGGAGCAGGGGAAACAGCAGCA...AGGAGCAGGGGAAACAGCAGCAAACAAGACAGACTCAATCTGGACCTTGGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587227.1
CDS-3UTR CCA 90 bp TCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGGTGGTTCTGGCCATCTaGCAAGGCACCTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SSREHLSNRRTIKKLTNEVVLAI*QGTWSW
Trigger: CCAGCTCCAGGTGCCTTGCCAGATGGCCAGAACCAC...CTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp ACCTGCTCCAGTTGGGTGTCAGGGATACTTCTGCCAAGTTCCATGAAATCATCCCAAGAGGTGTGGTTCTaGCCATCTGGCAAGGCACCT +
Preference number: 4 (lower is better)
Translates to: TCSSWVSGILLPSSMKSSQEVWF*PSGKAP
Trigger: AGGTGCCTTGCCAGATGGCCAGAACCACACCTCTTG...GGATGATTTCATGGAACTTGGCAGAAGTATCCCTGACACCCAACTGGAGCAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592677.5
ENST00000681479.1
CDS-3UTR CCA 90 bp CCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTTCAAATCTGGGCCTGGTCCGTGTTTaGATAGCCTCAGAAGGACTT +
Preference number: 4 (lower is better)
Translates to: PSCFQAGELIWGSSSSNLGLVRV*IASEGL
Trigger: AAGTCCTTCTGAGGCTATCCAAACACGGACCAGGCC...CAGATTTGAAGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CCA 90 bp GCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACAGTCATCGGGGTCTCATaGCCTGGTCCGTGTTTGGAT +
Preference number: 4 (lower is better)
Translates to: ALKRMAGSSREHLSNRRTVIGVS*PGPCLD
Trigger: ATCCAAACACGGACCAGGCCATGAGACCCCGATGAC...TGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp TCGATGACCTGCTCCAGTTGGGTGTCAGGGATACTTCTGCCAAGTTCCATGAAAGTCATCGGGGTCTCATaGCCTGGTCCGTGTTTGGAT +
Preference number: 4 (lower is better)
Translates to: SMTCSSWVSGILLPSSMKVIGVS*PGPCLD
Trigger: ATCCAAACACGGACCAGGCCATGAGACCCCGATGAC...TTTCATGGAACTTGGCAGAAGTATCCCTGACACCCAACTGGAGCAGGTCATCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR CCA 90 bp AGTGTAGATGAGCACTGCGCATTGATTCGCCTTCTGGCTCTCGATGACCTGCTCATGACCTGCTCCAGTTaGGTGTCAGGGATACTTCTG +
Preference number: 4 (lower is better)
Translates to: SVDEHCALIRLLALDDLLMTCSS*VSGILL
Trigger: CAGAAGTATCCCTGACACCCAACTGGAGCAGGTCAT...GAGCAGGTCATCGAGAGCCAGAAGGCGAATCAATGCGCAGTGCTCATCTACACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR CCA 90 bp AAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGAACTCGGCAGTCTCTTaGTTGAGGGGCGCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: KRMAGSSREHLSNRRTIKNSAVS*LRGAVP
Trigger: TGGGACTGCGCCCCTCAACCAAGAGACTGCCGAGTT...CTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp GATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACCCCAGACCGTCCAGCTaGCCCAGATCCCCAGAGTGT +
Preference number: 4 (lower is better)
Translates to: DFIALKRMAGSSREHLSNPRPSS*PRSPEC
Trigger: ACACTCTGGGGATCTGGGCCAGCTGGACGGTCTGGG...GTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp GAGCACCTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGGAATGTGGCCAATCTCAGTCACGGTaGATGCCTGGCTGCCCAGAC +
Preference number: 4 (lower is better)
Translates to: EHLSNRRTIKKLTNEECGQSQSR*MPGCPD
Trigger: GTCTGGGCAGCCAGGCATCCACCGTGACTGAGATTG...GCCACATTCCTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CCA 90 bp AAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGCAATCTCAGTCACGGTaGATGCCTGGCTGCCCAGAC +
Preference number: 4 (lower is better)
Translates to: KRMAGSSREHLSNRRTIKQSQSR*MPGCPD
Trigger: GTCTGGGCAGCCAGGCATCCACCGTGACTGAGATTG...CTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR TCA 90 bp CTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGGAATGTGGCTTCTTATCCGTCCAGCCAGGATaGTGGTGGTGGTGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: LSNRRTIKKLTNEECGFLSVQPG*WWWWEA
Trigger: TGCCTCCCACCACCACCATCATCCTGGCTGGACGGA...TAAGAAGCCACATTCCTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681525.1
CDS-3UTR TCA 90 bp TTGATTCGCCTTCTGGCTCTCGATGACCTGCTCCAGTTGGGTGTCAGGGATACTTCTTTAGCTCCTTCTTaGGTCTTTGGGGTTCCAGTC +
Preference number: 4 (lower is better)
Translates to: LIRLLALDDLLQLGVRDTSLAPS*VFGVPV
Trigger: GACTGGAACCCCAAAGACTCAAGAAGGAGCTAAAGA...AGTATCCCTGACACCCAACTGGAGCAGGTCATCGAGAGCCAGAAGGCGAATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR TCA 90 bp GAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTTCTTTAGCTCCTTCTTaGGTCTTTGGGGTTCCAGTC +
Preference number: 4 (lower is better)
Translates to: EGFPSCFQAGELIWGSSSSLAPS*VFGVPV
Trigger: GACTGGAACCCCAAAGACTCAAGAAGGAGCTAAAGA...AGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR TCA 90 bp GCTCTCGATGACCTGCTCCAGTTGGGTGTCAGGGATACTTCTGCCAAGTTCCATTCTTTAGCTCCTTCTTaGGTCTTTGGGGTTCCAGTC +
Preference number: 4 (lower is better)
Translates to: ALDDLLQLGVRDTSAKFHSLAPS*VFGVPV
Trigger: GACTGGAACCCCAAAGACTCAAGAAGGAGCTAAAGA...ATGGAACTTGGCAGAAGTATCCCTGACACCCAACTGGAGCAGGTCATCGAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR TCA 90 bp TTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCGCTCCAAACCCAGCTTaGTCAAGGATTTTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: LLEGFPSCFQAGELIWGSAPNPA*SRILQP
Trigger: AGGCTGCAAAATCCTTGATCAAGCTGGGTTTGGAGC...GGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR TCA 90 bp CCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTTCAAATCTGGCAGTCTGTACTGGATaGTCGCTTTTAGGGGCTCTA +
Preference number: 4 (lower is better)
Translates to: PSCFQAGELIWGSSSSNLAVCTG*SLLGAL
Trigger: TAGAGCCCCTAAAAGCGATCATCCAGTACAGACTGC...CAGATTTGAAGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR TCA 90 bp AGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGCCTTCTGGCTCTCGATaGCCTGCTCCAGTTGGGTGT +
Preference number: 4 (lower is better)
Translates to: SRLPNRLPWSHDLKVLRKPSGSR*PAPVGC
Trigger: ACACCCAACTGGAGCAGGTCATCGAGAGCCAGAAGG...CTTTCTAAGGACCTTCAAGTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp GTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGAAACATGAGCACTGCGCATTaGTTCGCCTTCTGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: VWQVLLGSTSPTDEQSRNMSTAH*FAFWLS
Trigger: CGAGAGCCAGAAGGCGAATCAATGCGCAGTGCTCAT...GTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp ACCTGCTCCAGTTGGGTGTCAGGGATACTTCTGCCAAGTTCCATGAAATCATCCTATGCCTGTGGTCCCTaGAGTGTAGATGAGCACTGC +
Preference number: 4 (lower is better)
Translates to: TCSSWVSGILLPSSMKSSYACGP*SVDEHC
Trigger: GCAGTGCTCATCTACACTTCAGGGACCACAGGCATA...GGATGATTTCATGGAACTTGGCAGAAGTATCCCTGACACCCAACTGGAGCAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR TCA 90 bp TTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCCACGTGATGTTGTCATaGCTGAGCATCACTCCCTTG +
Preference number: 4 (lower is better)
Translates to: LLEGFPSCFQAGELIWGSHVMLS*LSITPL
Trigger: CAAGGGAGTGATGCTCAGTCATGACAACATCACGTG...GGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR TCA 90 bp GACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGGGTTCTCCGCTCATCTaGTTCATCTCACACTTCAGC +
Preference number: 4 (lower is better)
Translates to: DLLEGFPSCFQAGELIWGGSPLI*FISHFS
Trigger: GCTGAAGTGTGAGATGAATCAGATGAGCGGAGAACC...CCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTC
51% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR TCA 90 bp TTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCGGTTCTCCGCTCATCTaGTTCATCTCACACTTCAGC +
Preference number: 4 (lower is better)
Translates to: LLEGFPSCFQAGELIWGSGSPLI*FISHFS
Trigger: GCTGAAGTGTGAGATGAATCAGATGAGCGGAGAACC...GGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR GCA 90 bp CTGAAGTGCTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGAACCTGAACATGAGCTaGCCCTTCCCAGCCCCCGTC +
Preference number: 4 (lower is better)
Translates to: LKCFIIRTYWKGFPVASRNLNMS*PFPAPV
Trigger: GACGGGGGCTGGGAAGGGGCAGCTCATGTTCAGGTT...CCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAGCACTTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
CDS-3UTR GCA 90 bp GTAAATCAGGCAGTTTTTAGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACAACCTGAACATGAGCTaGCCCTTCCCAGCCCCCGTC +
Preference number: 4 (lower is better)
Translates to: VNQAVFSRLPNRLPWSHDNLNMS*PFPAPV
Trigger: GACGGGGGCTGGGAAGGGGCAGCTCATGTTCAGGTT...GTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACTAAAAACTGCCTGATTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681525.1
CDS-3UTR GCA 90 bp GCTCTCGATGACCTGCTCCAGTTGGGTGTCAGGGATACTTCTGCCAAGTTCCATCTTGATCAAGGATTTTaGAGCCTTCCGACAAGCCTC +
Preference number: 4 (lower is better)
Translates to: ALDDLLQLGVRDTSAKFHLDQGF*SLPTSL
Trigger: GAGGCTTGTCGGAAGGCTGCAAAATCCTTGATCAAG...ATGGAACTTGGCAGAAGTATCCCTGACACCCAACTGGAGCAGGTCATCGAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR GCA 90 bp AACAGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATGAGGTCTGGCTCTCGATGACCTaGTCCAGTTGGGTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: NSRESFYLEQHFTYCNEVWLSMT*SSWVSG
Trigger: CCCTGACACCCAACTGGAGCAGGTCATCGAGAGCCA...GACCTCATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR GCA 90 bp AGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGTGGCTCTCGATGACCTaGTCCAGTTGGGTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: SRLPNRLPWSHDLKVLRKWLSMT*SSWVSG
Trigger: CCCTGACACCCAACTGGAGCAGGTCATCGAGAGCCA...CTTTCTAAGGACCTTCAAGTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR GCA 90 bp CCAATGCCATCCTTGTTCTGCTGGAACAGCATATTCTTACACCCAGTCAAGATCTGGCTCTCGATGACCTaGTCCAGTTGGGTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: PMPSLFCWNSIFLHPVKIWLSMT*SSWVSG
Trigger: CCCTGACACCCAACTGGAGCAGGTCATCGAGAGCCA...GATCTTGACTGGGTGTAAGAATATGCTGTTCCAGCAGAACAAGGATGGCATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681479.1
CDS-3UTR GCA 90 bp GCTCTCGATGACCTGCTCCAGTTGGGTGTCAGGGATACTTCTGCCAAGTTCCATAGTGTAGATGAGCACTaGGCATTGATTCGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: ALDDLLQLGVRDTSAKFHSVDEH*ALIRLL
Trigger: CAGAAGGCGAATCAATGCGCAGTGCTCATCTACACT...ATGGAACTTGGCAGAAGTATCCCTGACACCCAACTGGAGCAGGTCATCGAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR GCA 90 bp TTGATTCGCCTTCTGGCTCTCGATGACCTGCTCCAGTTGGGTGTCAGGGATACTAGTGTAGATGAGCACTaGGCATTGATTCGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: LIRLLALDDLLQLGVRDTSVDEH*ALIRLL
Trigger: CAGAAGGCGAATCAATGCGCAGTGCTCATCTACACT...AGTATCCCTGACACCCAACTGGAGCAGGTCATCGAGAGCCAGAAGGCGAATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR GCA 90 bp TCGATGACCTGCTCCAGTTGGGTGTCAGGGATACTTCTGCCAAGTTCCATGAAATCACTCCCTTGGGTATaGCTGTGGTCCCTGAAGTGT +
Preference number: 4 (lower is better)
Translates to: SMTCSSWVSGILLPSSMKSLPWV*LWSLKC
Trigger: ACACTTCAGGGACCACAGGCATACCCAAGGGAGTGA...TTTCATGGAACTTGGCAGAAGTATCCCTGACACCCAACTGGAGCAGGTCATCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592677.5
ENST00000681479.1
CDS-3UTR GCA 90 bp GCTCTCGATGACCTGCTCCAGTTGGGTGTCAGGGATACTTCTGCCAAGTTCCATTCTTGCCCACACGAATaGCTTCTTCTTCAAGCCCAT +
Preference number: 4 (lower is better)
Translates to: ALDDLLQLGVRDTSAKFHSCPHE*LLLQAH
Trigger: ATGGGCTTGAAGAAGAAGGCATTCGTGTGGGCAAGA...ATGGAACTTGGCAGAAGTATCCCTGACACCCAACTGGAGCAGGTCATCGAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681479.1
CDS-3UTR GCA 90 bp CTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGGAATGTGGCTTCTTACGGTGGATGCCTGGCTaGCCAGACCCCGACAGAAGT +
Preference number: 4 (lower is better)
Translates to: LSNRRTIKKLTNEECGFLRWMPG*PDPDRS
Trigger: ACTTCTGTCGGGGTCTGGGCAGCCAGGCATCCACCG...TAAGAAGCCACATTCCTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR GCA 90 bp CACACTTCAGCGTCAGCAACATGCTCAGAAACTTCAGTTTATCTCCTACTAACACGGTGGATGCCTGGCTaGCCAGACCCCGACAGAAGT +
Preference number: 4 (lower is better)
Translates to: HTSASATCSETSVYLLLTRWMPG*PDPDRS
Trigger: ACTTCTGTCGGGGTCTGGGCAGCCAGGCATCCACCG...TGTTAGTAGGAGATAAACTGAAGTTTCTGAGCATGTTGCTGACGCTGAAGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681479.1
CDS-3UTR GCA 90 bp AGGCTTCCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTCTCAGTCACGGTGGATaGCTGGCTGCCCAGACCCCG +
Preference number: 4 (lower is better)
Translates to: RLPWSHDLKVLRKIYSDFLSHGG*LAAQTP
Trigger: CGGGGTCTGGGCAGCCAGGCATCCACCGTGACTGAG...AAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCAGGGAAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CCA 90 bp AACAGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATGAGGTCAGGCAGGAGGATGGGTaGTTTCCCTCCACAACAGGC +
Preference number: 4 (lower is better)
Translates to: NSRESFYLEQHFTYCNEVRQEDG*FPSTTG
Trigger: GCCTGTTGTGGAGGGAAACCACCCATCCTCCTGCCT...GACCTCATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681525.1
CDS-3UTR CCA 90 bp AGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGAGGCAGGAGGATGGGTaGTTTCCCTCCACAACAGGC +
Preference number: 4 (lower is better)
Translates to: SRLPNRLPWSHDLKVLRKRQEDG*FPSTTG
Trigger: GCCTGTTGTGGAGGGAAACCACCCATCCTCCTGCCT...CTTTCTAAGGACCTTCAAGTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681525.1
CDS-3UTR CCA 90 bp GCTCTCGATGACCTGCTCCAGTTGGGTGTCAGGGATACTTCTGCCAAGTTCCATTGGAGCTGGGACATCTaGTCACTCAGGTGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: ALDDLLQLGVRDTSAKFHWSWDI*SLRCFL
Trigger: AAGAAAACACCTGAGTGACCAGATGTCCCAGCTCCA...ATGGAACTTGGCAGAAGTATCCCTGACACCCAACTGGAGCAGGTCATCGAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR CCA 90 bp GAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTTGGAGCTGGGACATCTaGTCACTCAGGTGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: EGFPSCFQAGELIWGSSSWSWDI*SLRCFL
Trigger: AAGAAAACACCTGAGTGACCAGATGTCCCAGCTCCA...AGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CCA 90 bp CTCCAGTTGGGTGTCAGGGATACTTCTGCCAAGTTCCATGAAATCATCCCAAGAATCTGGCAAGGCACCTaGAGCTGGGACATCTGGTCA +
Preference number: 4 (lower is better)
Translates to: LQLGVRDTSAKFHEIIPRIWQGT*SWDIWS
Trigger: TGACCAGATGTCCCAGCTCCAGGTGCCTTGCCAGAT...TCTTGGGATGATTTCATGGAACTTGGCAGAAGTATCCCTGACACCCAACTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592677.5
ENST00000681479.1
CDS-3UTR CCA 90 bp CTGAAGTGCTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGGTGGTTCTGGCCATCTaGCAAGGCACCTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LKCFIIRTYWKGFPVASRVVLAI*QGTWSW
Trigger: CCAGCTCCAGGTGCCTTGCCAGATGGCCAGAACCAC...CCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAGCACTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000681479.1
CDS-3UTR CCA 90 bp CTCGATGACCTGCTCCAGTTGGGTGTCAGGGATACTTCTGCCAAGTTCCATGAAACTCTTCAAGAGGTGTaGTTCTGGCCATCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: LDDLLQLGVRDTSAKFHETLQEV*FWPSGK
Trigger: CTTGCCAGATGGCCAGAACCACACCTCTTGAAGAGT...TTCATGGAACTTGGCAGAAGTATCCCTGACACCCAACTGGAGCAGGTCATCGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592677.5
ENST00000681479.1
CDS-3UTR CCA 90 bp TTGATTCGCCTTCTGGCTCTCGATGACCTGCTCCAGTTGGGTGTCAGGGATACTTCCTTCTTGAGTCTTTaGGGTTCCAGTCATTCCAGG +
Preference number: 4 (lower is better)
Translates to: LIRLLALDDLLQLGVRDTSFLSL*GSSHSR
Trigger: CCTGGAATGACTGGAACCCCAAAGACTCAAGAAGGA...AGTATCCCTGACACCCAACTGGAGCAGGTCATCGAGAGCCAGAAGGCGAATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR CCA 90 bp GAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTTCCTTCTTGAGTCTTTaGGGTTCCAGTCATTCCAGG +
Preference number: 4 (lower is better)
Translates to: EGFPSCFQAGELIWGSSSSFLSL*GSSHSR
Trigger: CCTGGAATGACTGGAACCCCAAAGACTCAAGAAGGA...AGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CCA 90 bp TCGATGACCTGCTCCAGTTGGGTGTCAGGGATACTTCTGCCAAGTTCCATGAAAGGCCTGGTCCGTGTTTaGATAGCCTCAGAAGGACTT +
Preference number: 4 (lower is better)
Translates to: SMTCSSWVSGILLPSSMKGLVRV*IASEGL
Trigger: AAGTCCTTCTGAGGCTATCCAAACACGGACCAGGCC...TTTCATGGAACTTGGCAGAAGTATCCCTGACACCCAACTGGAGCAGGTCATCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR CCA 90 bp GAGCACCTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGGAATGTGGCGTCATCGGGGTCTCATaGCCTGGTCCGTGTTTGGAT +
Preference number: 4 (lower is better)
Translates to: EHLSNRRTIKKLTNEECGVIGVS*PGPCLD
Trigger: ATCCAAACACGGACCAGGCCATGAGACCCCGATGAC...GCCACATTCCTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp TCGATGACCTGCTCCAGTTGGGTGTCAGGGATACTTCTGCCAAGTTCCATGAAAAGGATACCAACTCCGTaGAAACGCTCCAAACCCAGC +
Preference number: 4 (lower is better)
Translates to: SMTCSSWVSGILLPSSMKRIPTP*KRSKPS
Trigger: GCTGGGTTTGGAGCGTTTCCACGGAGTTGGTATCCT...TTTCATGGAACTTGGCAGAAGTATCCCTGACACCCAACTGGAGCAGGTCATCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR CCA 90 bp GCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACAAGGATACCAACTCCGTaGAAACGCTCCAAACCCAGC +
Preference number: 4 (lower is better)
Translates to: ALKRMAGSSREHLSNRRTRIPTP*KRSKPS
Trigger: GCTGGGTTTGGAGCGTTTCCACGGAGTTGGTATCCT...TGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp GAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTATTGGCAGTCTGTACTaGATGATCGCTTTTAGGGGC +
Preference number: 4 (lower is better)
Translates to: EGFPSCFQAGELIWGSSSIGSLY*MIAFRG
Trigger: GCCCCTAAAAGCGATCATCCAGTACAGACTGCCAAT...AGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CCA 90 bp AGTGCTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGAACTCGGCAGTCTCTTaGTTGAGGGGCGCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: SALLSGLIGRVSQLLPGRNSAVS*LRGAVP
Trigger: TGGGACTGCGCCCCTCAACCAAGAGACTGCCGAGTT...CCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CCA 90 bp AGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATGAGGTCTTCCAATCTCAGTCACGGTaGATGCCTGGCTGCCCAGAC +
Preference number: 4 (lower is better)
Translates to: SRESFYLEQHFTYCNEVFQSQSR*MPGCPD
Trigger: GTCTGGGCAGCCAGGCATCCACCGTGACTGAGATTG...GAAGACCTCATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CCA 90 bp GACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGCCCAATAGGCTTCCCTaGAGTCATGACTTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: DLLEGFPSCFQAGELIWGPNRLP*SHDLKV
Trigger: GACCTTCAAGTCATGACTCCAGGGAAGCCTATTGGG...CCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CCA 90 bp TCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGCCACAGCACTGGAGCTaGGACATCTGGTCACTCAGG +
Preference number: 4 (lower is better)
Translates to: SSREHLSNRRTIKKLTNEPQHWS*DIWSLR
Trigger: CCTGAGTGACCAGATGTCCCAGCTCCAGTGCTGTGG...CTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591403.5
CDS-3UTR CCA 90 bp GTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGAAACGTCACGGTGGATGCCTaGCTTCAGCGTCAGCAACAT +
Preference number: 4 (lower is better)
Translates to: VWQVLLGSTSPTDEQSRNVTVDA*LQRQQH
Trigger: ATGTTGCTGACGCTGAAGCCAGGCATCCACCGTGAC...GTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590132.1
3UTR CAA 72 bp TTGATTCGCCTTCTGGCTCTCGATGACCTGCTCCAGTaGGGTGTCAGGGATACTTCTGCCAAGTTCCATGAA +
Preference number: 4 (lower is better)
Translates to: LIRLLALDDLLQ*GVRDTSAKFHE
Trigger: TTCATGGAACTTGGCAGAAGTATCCCTGACACCCAACTGGAGCAGGTCATCGAGAGCCAGAAGGCGAATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR TCA 90 bp GAGTACAAGTTGTTGTTCTTCTTCATTGGCAGTCTGTACTGGATGATCGCTTTTTCCGTCCAGCCAGGATaGTGGTGGTGGTGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: EYKLLFFFIGSLYWMIAFSVQPG*WWWWEA
Trigger: TGCCTCCCACCACCACCATCATCCTGGCTGGACGGA...AAAAGCGATCATCCAGTACAGACTGCCAATGAAGAAGAACAACAACTTGTACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587617.1
ENST00000592677.5
CDS-3UTR TCA 90 bp GACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCTTTAGCTCCTTCTTaGGTCTTTGGGGTTCCAGTC +
Preference number: 4 (lower is better)
Translates to: DLLEGFPSCFQAGELIWGSLAPS*VFGVPV
Trigger: GACTGGAACCCCAAAGACTCAAGAAGGAGCTAAAGA...CCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR TCA 90 bp CCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTTCAAATCTGTCTTTAGCTCCTTCTTaGGTCTTTGGGGTTCCAGTC +
Preference number: 4 (lower is better)
Translates to: PSCFQAGELIWGSSSSNLSLAPS*VFGVPV
Trigger: GACTGGAACCCCAAAGACTCAAGAAGGAGCTAAAGA...CAGATTTGAAGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR TCA 90 bp GCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACAGCAGTCTGTACTGGATaGTCGCTTTTAGGGGCTCTA +
Preference number: 4 (lower is better)
Translates to: ALKRMAGSSREHLSNRRTAVCTG*SLLGAL
Trigger: TAGAGCCCCTAAAAGCGATCATCCAGTACAGACTGC...TGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp GAAGTGCTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCACCTTCTGGCTCTCGATaGCCTGCTCCAGTTGGGTGT +
Preference number: 4 (lower is better)
Translates to: EVLYYQDLLEGFPSCFQAPSGSR*PAPVGC
Trigger: ACACCCAACTGGAGCAGGTCATCGAGAGCCAGAAGG...TGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAGCACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR TCA 90 bp GATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACCCTTCTGGCTCTCGATaGCCTGCTCCAGTTGGGTGT +
Preference number: 4 (lower is better)
Translates to: DFIALKRMAGSSREHLSNPSGSR*PAPVGC
Trigger: ACACCCAACTGGAGCAGGTCATCGAGAGCCAGAAGG...GTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp GTAAATCAGGCAGTTTTTAGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACCCTTCTGGCTCTCGATaGCCTGCTCCAGTTGGGTGT +
Preference number: 4 (lower is better)
Translates to: VNQAVFSRLPNRLPWSHDPSGSR*PAPVGC
Trigger: ACACCCAACTGGAGCAGGTCATCGAGAGCCAGAAGG...GTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACTAAAAACTGCCTGATTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp AGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATGAGGTCTTCATGAGCACTGCGCATTaGTTCGCCTTCTGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: SRESFYLEQHFTYCNEVFMSTAH*FAFWLS
Trigger: CGAGAGCCAGAAGGCGAATCAATGCGCAGTGCTCAT...GAAGACCTCATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp CTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGATGAGCACTGCGCATTaGTTCGCCTTCTGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: LYYQDLLEGFPSCFQAGEMSTAH*FAFWLS
Trigger: CGAGAGCCAGAAGGCGAATCAATGCGCAGTGCTCAT...CTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR TCA 90 bp AACAGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATGAGGTCATGAGCACTGCGCATTaGTTCGCCTTCTGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: NSRESFYLEQHFTYCNEVMSTAH*FAFWLS
Trigger: CGAGAGCCAGAAGGCGAATCAATGCGCAGTGCTCAT...GACCTCATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp GCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACACACGTGATGTTGTCATaGCTGAGCATCACTCCCTTG +
Preference number: 4 (lower is better)
Translates to: ALKRMAGSSREHLSNRRTHVMLS*LSITPL
Trigger: CAAGGGAGTGATGCTCAGTCATGACAACATCACGTG...TGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp AGTTATTCTGGTTGGATATCGTGTGGGGTCCCGAGCTCTCACTCAACCCATACACACGTGATGTTGTCATaGCTGAGCATCACTCCCTTG +
Preference number: 4 (lower is better)
Translates to: SYSGWISCGVPSSHSTHTHVMLS*LSITPL
Trigger: CAAGGGAGTGATGCTCAGTCATGACAACATCACGTG...TGTATGGGTTGAGTGAGAGCTCGGGACCCCACACGATATCCAACCAGAATAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681479.1
CDS-3UTR TCA 90 bp GCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACATTTCCAGATAGCCCATaGAGATGTGCCTACCCCAGA +
Preference number: 4 (lower is better)
Translates to: ALKRMAGSSREHLSNRRTFPDSP*RCAYPR
Trigger: TCTGGGGTAGGCACATCTTCATGGGCTATCTGGAAA...TGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp GAGCACCTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGGAATGTGGCTCCAGGCAGGTGAGTTaGTTTGGGGGTCCAGTTCTT +
Preference number: 4 (lower is better)
Translates to: EHLSNRRTIKKLTNEECGSRQVS*FGGPVL
Trigger: AAGAACTGGACCCCCAAATCAACTCACCTGCCTGGA...GCCACATTCCTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp AGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATGAGGTCTTCTTGCTTCCAGGCAGGTaGGTTGATTTGGGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: SRESFYLEQHFTYCNEVFLLPGR*VDLGVQ
Trigger: CTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAA...GAAGACCTCATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR GCA 90 bp AAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGGGTGTGCAGAAACCATaGTCCACAGCACTGTCACTC +
Preference number: 4 (lower is better)
Translates to: KRMAGSSREHLSNRRTIKGVQKP*STALSL
Trigger: GAGTGACAGTGCTGTGGAGCATGGTTTCTGCACACC...CTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000588304.5
ENST00000588485.6
ENST00000681479.1
ENST00000681525.1
CDS-3UTR GCA 90 bp CCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTTCAAATCTGCTTGATCAAGGATTTTaGAGCCTTCCGACAAGCCTC +
Preference number: 4 (lower is better)
Translates to: PSCFQAGELIWGSSSSNLLDQGF*SLPTSL
Trigger: GAGGCTTGTCGGAAGGCTGCAAAATCCTTGATCAAG...CAGATTTGAAGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR GCA 90 bp TTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTTCAAATTCACTCCCTTGGGTATaGCTGTGGTCCCTGAAGTGT +
Preference number: 4 (lower is better)
Translates to: FPSCFQAGELIWGSSSSNSLPWV*LWSLKC
Trigger: ACACTTCAGGGACCACAGGCATACCCAAGGGAGTGA...ATTTGAAGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR GCA 90 bp GAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTGAAGCCAATGTTTCTTaGCCACACGAATGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: EGFPSCFQAGELIWGSSSEANVS*PHECLL
Trigger: AAGAAGGCATTCGTGTGGGCAAGAAACATTGGCTTC...AGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR GCA 90 bp GAGCACCTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGGAATGTGGCGGCAGATCTCCCCAATaGCATCCTTGTTCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: EHLSNRRTIKKLTNEECGGRSPQ*HPCSAG
Trigger: TCCAGCAGAACAAGGATGGCATTGGGGAGATCTGCC...GCCACATTCCTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR GCA 90 bp CTTAAAAACAGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATCGGTGGATGCCTGGCTaGCCAGACCCCGACAGAAGT +
Preference number: 4 (lower is better)
Translates to: LKNSRESFYLEQHFTYCNRWMPG*PDPDRS
Trigger: ACTTCTGTCGGGGTCTGGGCAGCCAGGCATCCACCG...ATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCTGTTTTTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR GCA 90 bp CCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTATTGCTCTCAGTCACGGTGGATaGCTGGCTGCCCAGACCCCG +
Preference number: 4 (lower is better)
Translates to: PWSHDLKVLRKIYSDFIALSHGG*LAAQTP
Trigger: CGGGGTCTGGGCAGCCAGGCATCCACCGTGACTGAG...AGCAATAAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR GCA 90 bp TCCAGTTGGGTGTCAGGGATACTTCTGCCAAGTTCCATGAAATCATCCCAAGAGACCAGGGGGTCTTGCTaGTTCACAATCTCAGTCACG +
Preference number: 4 (lower is better)
Translates to: SSWVSGILLPSSMKSSQETRGSC*FTISVT
Trigger: CGTGACTGAGATTGTGAAGCAGCAAGACCCCCTGGT...CTCTTGGGATGATTTCATGGAACTTGGCAGAAGTATCCCTGACACCCAACTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681479.1
CDS-3UTR GCA 90 bp GAGCACCTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGGAATGTGGCGAAGGGTTTCCCAGTTaGTTCCAGGCAGGTGAGTTG +
Preference number: 4 (lower is better)
Translates to: EHLSNRRTIKKLTNEECGEGFPS*FQAGEL
Trigger: CAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTC...GCCACATTCCTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS-3UTR GCA 90 bp TTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTTCAAATGAAGGGTTTCCCAGTTaGTTCCAGGCAGGTGAGTTG +
Preference number: 4 (lower is better)
Translates to: FPSCFQAGELIWGSSSSNEGFPS*FQAGEL
Trigger: CAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTC...ATTTGAAGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CCA 90 bp GAGCACCTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGGAATGTGGCACAGGTAGCCCCTCCTaGAAACCTGAACATGAGCTG +
Preference number: 4 (lower is better)
Translates to: EHLSNRRTIKKLTNEECGTGSPS*KPEHEL
Trigger: CAGCTCATGTTCAGGTTTCCAGGAGGGGCTACCTGT...GCCACATTCCTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681525.1
CDS-3UTR CCA 90 bp CCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTTCAAATCTGTGGAGCTGGGACATCTaGTCACTCAGGTGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: PSCFQAGELIWGSSSSNLWSWDI*SLRCFL
Trigger: AAGAAAACACCTGAGTGACCAGATGTCCCAGCTCCA...CAGATTTGAAGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CCA 90 bp TATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTATCTGGCAAGGCACCTaGAGCTGGGACATCTGGTCA +
Preference number: 4 (lower is better)
Translates to: YQDLLEGFPSCFQAGELIIWQGT*SWDIWS
Trigger: TGACCAGATGTCCCAGCTCCAGGTGCCTTGCCAGAT...AATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000681479.1
CDS-3UTR CCA 90 bp AGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATGAGGTCTTCCAAGAGGTGTGGTTCTaGCCATCTGGCAAGGCACCT +
Preference number: 4 (lower is better)
Translates to: SRESFYLEQHFTYCNEVFQEVWF*PSGKAP
Trigger: AGGTGCCTTGCCAGATGGCCAGAACCACACCTCTTG...GAAGACCTCATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp CTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGGTCATCGGGGTCTCATaGCCTGGTCCGTGTTTGGAT +
Preference number: 4 (lower is better)
Translates to: LYYQDLLEGFPSCFQAGEVIGVS*PGPCLD
Trigger: ATCCAAACACGGACCAGGCCATGAGACCCCGATGAC...CTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CCA 90 bp TGGGTGTCAGGGATACTTCTGCCAAGTTCCATGAAATCATCCCAAGAGTACAAGGTCATCGGGGTCTCATaGCCTGGTCCGTGTTTGGAT +
Preference number: 4 (lower is better)
Translates to: WVSGILLPSSMKSSQEYKVIGVS*PGPCLD
Trigger: ATCCAAACACGGACCAGGCCATGAGACCCCGATGAC...CTTGTACTCTTGGGATGATTTCATGGAACTTGGCAGAAGTATCCCTGACACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR CCA 90 bp AGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATGAGGTCTTCGTCATCGGGGTCTCATaGCCTGGTCCGTGTTTGGAT +
Preference number: 4 (lower is better)
Translates to: SRESFYLEQHFTYCNEVFVIGVS*PGPCLD
Trigger: ATCCAAACACGGACCAGGCCATGAGACCCCGATGAC...GAAGACCTCATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp GAGCACCTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGGAATGTGGCAGGATACCAACTCCGTaGAAACGCTCCAAACCCAGC +
Preference number: 4 (lower is better)
Translates to: EHLSNRRTIKKLTNEECGRIPTP*KRSKPS
Trigger: GCTGGGTTTGGAGCGTTTCCACGGAGTTGGTATCCT...GCCACATTCCTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp GTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGAAACAGGATACCAACTCCGTaGAAACGCTCCAAACCCAGC +
Preference number: 4 (lower is better)
Translates to: VWQVLLGSTSPTDEQSRNRIPTP*KRSKPS
Trigger: GCTGGGTTTGGAGCGTTTCCACGGAGTTGGTATCCT...GTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp CTCGATGACCTGCTCCAGTTGGGTGTCAGGGATACTTCTGCCAAGTTCCATGAAATTGGCAGTCTGTACTaGATGATCGCTTTTAGGGGC +
Preference number: 4 (lower is better)
Translates to: LDDLLQLGVRDTSAKFHEIGSLY*MIAFRG
Trigger: GCCCCTAAAAGCGATCATCCAGTACAGACTGCCAAT...TTCATGGAACTTGGCAGAAGTATCCCTGACACCCAACTGGAGCAGGTCATCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR CCA 90 bp AGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGTGGTTGGATATCGTGTaGGGTCCCGAGCTCTCACTC +
Preference number: 4 (lower is better)
Translates to: SRLPNRLPWSHDLKVLRKWLDIV*GPELSL
Trigger: GAGTGAGAGCTCGGGACCCCACACGATATCCAACCA...CTTTCTAAGGACCTTCAAGTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp TCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGTGGTTGGATATCGTGTaGGGTCCCGAGCTCTCACTC +
Preference number: 4 (lower is better)
Translates to: SSREHLSNRRTIKKLTNEWLDIV*GPELSL
Trigger: GAGTGAGAGCTCGGGACCCCACACGATATCCAACCA...CTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp CTTCTGGCTCTCGATGACCTGCTCCAGTTGGGTGTCAGGGATACTTCTGCCAAGCCATCCTTGTTCTGCTaGAACAGCATATTCTTACAC +
Preference number: 4 (lower is better)
Translates to: LLALDDLLQLGVRDTSAKPSLFC*NSIFLH
Trigger: GTGTAAGAATATGCTGTTCCAGCAGAACAAGGATGG...CTTGGCAGAAGTATCCCTGACACCCAACTGGAGCAGGTCATCGAGAGCCAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681479.1
CDS-3UTR CCA 90 bp AGGTTCTCCGCTCATCTGATTCATCTCACACTTCAGCGTCAGCAACATGCTCAGAGGTCTCAACAGGAATaGGGGGCACATTTTCACCAC +
Preference number: 4 (lower is better)
Translates to: RFSAHLIHLTLQRQQHAQRSQQE*GAHFHH
Trigger: GTGGTGAAAATGTGCCCCCCATTCCTGTTGAGACCT...CTGAGCATGTTGCTGACGCTGAAGTGTGAGATGAATCAGATGAGCGGAGAACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681479.1
CDS-3UTR CCA 90 bp CTGAAGTGCTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAATCTCAGTCACGGTaGATGCCTGGCTGCCCAGAC +
Preference number: 4 (lower is better)
Translates to: LKCFIIRTYWKGFPVASRQSQSR*MPGCPD
Trigger: GTCTGGGCAGCCAGGCATCCACCGTGACTGAGATTG...CCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAGCACTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CCA 90 bp GAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTGCTCTCCACCATAGATaGAAAAGTCCTTCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: EGFPSCFQAGELIWGSSSALHHR*KSPSPR
Trigger: TCTTGGAGAAGGACTTTTCCATCTATGGTGGAGAGC...AGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CCA 90 bp AACAGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATGAGGTCCATGCTCCACAGCACTaGAGCTGGGACATCTGGTCA +
Preference number: 4 (lower is better)
Translates to: NSRESFYLEQHFTYCNEVHAPQH*SWDIWS
Trigger: TGACCAGATGTCCCAGCTCCAGTGCTGTGGAGCATG...GACCTCATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591403.5
CDS-3UTR CCA 90 bp TCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGCAATCTCAGTCACGGTaGATGCCTGGCTTCAGCGTC +
Preference number: 4 (lower is better)
Translates to: SSREHLSNRRTIKKLTNEQSQSR*MPGFSV
Trigger: GACGCTGAAGCCAGGCATCCACCGTGACTGAGATTG...CTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590132.1
CDS-3UTR TCA 90 bp GCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACATCTTTAGCTCCTTCTTaGGTCTTTGGGGTTCCAGTC +
Preference number: 4 (lower is better)
Translates to: ALKRMAGSSREHLSNRRTSLAPS*VFGVPV
Trigger: GACTGGAACCCCAAAGACTCAAGAAGGAGCTAAAGA...TGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp GTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGAAACGCTCCAAACCCAGCTTaGTCAAGGATTTTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: VWQVLLGSTSPTDEQSRNAPNPA*SRILQP
Trigger: AGGCTGCAAAATCCTTGATCAAGCTGGGTTTGGAGC...GTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp CTCCAGTTGGGTGTCAGGGATACTTCTGCCAAGTTCCATGAAATCATCCCAAGAGCAGTCTGTACTGGATaGTCGCTTTTAGGGGCTCTA +
Preference number: 4 (lower is better)
Translates to: LQLGVRDTSAKFHEIIPRAVCTG*SLLGAL
Trigger: TAGAGCCCCTAAAAGCGATCATCCAGTACAGACTGC...TCTTGGGATGATTTCATGGAACTTGGCAGAAGTATCCCTGACACCCAACTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR TCA 90 bp GTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGAAACGCAGTCTGTACTGGATaGTCGCTTTTAGGGGCTCTA +
Preference number: 4 (lower is better)
Translates to: VWQVLLGSTSPTDEQSRNAVCTG*SLLGAL
Trigger: TAGAGCCCCTAAAAGCGATCATCCAGTACAGACTGC...GTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp GAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTTTCTGCCAAGTTCCATaGAATCATCCCAAGAGTACA +
Preference number: 4 (lower is better)
Translates to: EGFPSCFQAGELIWGSSSFCQVP*NHPKST
Trigger: TGTACTCTTGGGATGATTTCATGGAACTTGGCAGAA...AGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR TCA 90 bp CTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGGAATGTGGCTTCTTACCTTCTGGCTCTCGATaGCCTGCTCCAGTTGGGTGT +
Preference number: 4 (lower is better)
Translates to: LSNRRTIKKLTNEECGFLPSGSR*PAPVGC
Trigger: ACACCCAACTGGAGCAGGTCATCGAGAGCCAGAAGG...TAAGAAGCCACATTCCTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp GAAGTGCTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAATGAGCACTGCGCATTaGTTCGCCTTCTGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: EVLYYQDLLEGFPSCFQAMSTAH*FAFWLS
Trigger: CGAGAGCCAGAAGGCGAATCAATGCGCAGTGCTCAT...TGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAGCACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR TCA 90 bp AAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGTCCCTGAAGTGTAGATaGGCACTGCGCATTGATTCG +
Preference number: 4 (lower is better)
Translates to: KRMAGSSREHLSNRRTIKSLKCR*ALRIDS
Trigger: CGAATCAATGCGCAGTGCTCATCTACACTTCAGGGA...CTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp GTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGAAACTCCCTGAAGTGTAGATaGGCACTGCGCATTGATTCG +
Preference number: 4 (lower is better)
Translates to: VWQVLLGSTSPTDEQSRNSLKCR*ALRIDS
Trigger: CGAATCAATGCGCAGTGCTCATCTACACTTCAGGGA...GTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp AGTGCTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTATGCCTGTGGTCCCTaGAGTGTAGATGAGCACTGC +
Preference number: 4 (lower is better)
Translates to: SALLSGLIGRVSQLLPGRYACGP*SVDEHC
Trigger: GCAGTGCTCATCTACACTTCAGGGACCACAGGCATA...CCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR TCA 90 bp GCCCACACGAATGCCTTCTTCTTCAAGCCCATGGACTTGGCACTATTTTTCTTCTTACCAAGGTGCCCTTaGGAGCATCTGCTTGAGCAA +
Preference number: 4 (lower is better)
Translates to: AHTNAFFFKPMDLALFFFLPRCP*EHLLEQ
Trigger: TTGCTCAAGCAGATGCTCTCAAGGGCACCTTGGTAA...GAAGAAAAATAGTGCCAAGTCCATGGGCTTGAAGAAGAAGGCATTCGTGTGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681479.1
CDS-3UTR TCA 90 bp GAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTATCTTCTCCCAAATTTaGGGCACTCCAATGAAGACA +
Preference number: 4 (lower is better)
Translates to: EGFPSCFQAGELIWGSSSIFSQI*GTPMKT
Trigger: TGTCTTCATTGGAGTGCCTCAAATTTGGGAGAAGAT...AGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR TCA 90 bp GAAGTGCTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGACCCCGACAGAAGTTaGTGGCCTCGAAGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: EVLYYQDLLEGFPSCFQADPDRS*WPRSSA
Trigger: AGCTGAACTTCGAGGCCATCAACTTCTGTCGGGGTC...TGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAGCACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR TCA 90 bp CCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTTCAAATCTGAGTCCTTCTCCAAGATaGCCCACTTTTCAATCCTCT +
Preference number: 4 (lower is better)
Translates to: PSCFQAGELIWGSSSSNLSPSPR*PTFQSS
Trigger: AGAGGATTGAAAAGTGGGTCATCTTGGAGAAGGACT...CAGATTTGAAGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS-3UTR TCA 90 bp ATTGATGCCTTGCTGGATGGCCTTGTAGACCAGGGGGTCTTGCTGCTTCACAATAGTCCTTCTCCAAGATaGCCCACTTTTCAATCCTCT +
Preference number: 4 (lower is better)
Translates to: IDALLDGLVDQGVLLLHNSPSPR*PTFQSS
Trigger: AGAGGATTGAAAAGTGGGTCATCTTGGAGAAGGACT...ATTGTGAAGCAGCAAGACCCCCTGGTCTACAAGGCCATCCAGCAAGGCATCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590132.1
ENST00000681479.1
CDS-3UTR TCA 90 bp TTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTCCTTCTCCAAGATaGCCCACTTTTCAATCCTCT +
Preference number: 4 (lower is better)
Translates to: LLEGFPSCFQAGELIWGSSPSPR*PTFQSS
Trigger: AGAGGATTGAAAAGTGGGTCATCTTGGAGAAGGACT...GGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS-3UTR TCA 90 bp GACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTTTCACTTATTGCAATaGGGTCTTCCTGCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: DLLEGFPSCFQAGELIWGFHLLQ*GLPAEG
Trigger: GCCTTCAGCAGGAAGACCTCATTGCAATAAGTGAAA...CCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS-3UTR TCA 90 bp AACAGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATGAGGTCTCCAGGCAGGTGAGTTaGTTTGGGGGTCCAGTTCTT +
Preference number: 4 (lower is better)
Translates to: NSRESFYLEQHFTYCNEVSRQVS*FGGPVL
Trigger: AAGAACTGGACCCCCAAATCAACTCACCTGCCTGGA...GACCTCATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp TATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTCCAGGCAGGTGAGTTaGTTTGGGGGTCCAGTTCTT +
Preference number: 4 (lower is better)
Translates to: YQDLLEGFPSCFQAGELISRQVS*FGGPVL
Trigger: AAGAACTGGACCCCCAAATCAACTCACCTGCCTGGA...AATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS-3UTR TCA 90 bp AGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGATGAGGTCTTCCTGCTaGAGGCTAGCTCTCCACCAT +
Preference number: 4 (lower is better)
Translates to: SRLPNRLPWSHDLKVLRKMRSSC*RLALHH
Trigger: ATGGTGGAGAGCTAGCCTTCAGCAGGAAGACCTCAT...CTTTCTAAGGACCTTCAAGTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590132.1
CDS-3UTR GCA 90 bp CTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGGGTGTGCAGAAACCATaGTCCACAGCACTGTCACTC +
Preference number: 4 (lower is better)
Translates to: LYYQDLLEGFPSCFQAGEGVQKP*STALSL
Trigger: GAGTGACAGTGCTGTGGAGCATGGTTTCTGCACACC...CTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588304.5
ENST00000588485.6
ENST00000681479.1
CDS-3UTR GCA 90 bp AGGTTCTCCGCTCATCTGATTCATCTCACACTTCAGCGTCAGCAACATGCTCAGTTTGCCATTCTTGGATaGGAGGGCTGGATAAGTTCC +
Preference number: 4 (lower is better)
Translates to: RFSAHLIHLTLQRQQHAQFAILG*EGWISS
Trigger: GGAACTTATCCAGCCCTCGCATCCAAGAATGGCAAA...CTGAGCATGTTGCTGACGCTGAAGTGTGAGATGAATCAGATGAGCGGAGAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681479.1
CDS-3UTR GCA 90 bp GCTCTCGATGACCTGCTCCAGTTGGGTGTCAGGGATACTTCTGCCAAGTTCCATAGTGATAAACCACTCTaGAGAGTTAAACCCCAGGAT +
Preference number: 4 (lower is better)
Translates to: ALDDLLQLGVRDTSAKFHSDKPL*RVKPQD
Trigger: ATCCTGGGGTTTAACTCTGCAGAGTGGTTTATCACT...ATGGAACTTGGCAGAAGTATCCCTGACACCCAACTGGAGCAGGTCATCGAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR GCA 90 bp GAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTAGTGATAAACCACTCTaGAGAGTTAAACCCCAGGAT +
Preference number: 4 (lower is better)
Translates to: EGFPSCFQAGELIWGSSSSDKPL*RVKPQD
Trigger: ATCCTGGGGTTTAACTCTGCAGAGTGGTTTATCACT...AGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR GCA 90 bp AAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGTTAGGGGCTCTAGGCTaGTCTGTGGAATCGAAAGGA +
Preference number: 4 (lower is better)
Translates to: KRMAGSSREHLSNRRTIKLGALG*SVESKG
Trigger: TCCTTTCGATTCCACAGAGCAGCCTAGAGCCCCTAA...CTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681525.1
CDS-3UTR GCA 90 bp GTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGAAACTTAGGGGCTCTAGGCTaGTCTGTGGAATCGAAAGGA +
Preference number: 4 (lower is better)
Translates to: VWQVLLGSTSPTDEQSRNLGALG*SVESKG
Trigger: TCCTTTCGATTCCACAGAGCAGCCTAGAGCCCCTAA...GTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681525.1
CDS-3UTR GCA 90 bp GCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACAAGTGTAGATGAGCACTaGGCATTGATTCGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: ALKRMAGSSREHLSNRRTSVDEH*ALIRLL
Trigger: CAGAAGGCGAATCAATGCGCAGTGCTCATCTACACT...TGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR GCA 90 bp AACAGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATGAGGTCTCACTCCCTTGGGTATaGCTGTGGTCCCTGAAGTGT +
Preference number: 4 (lower is better)
Translates to: NSRESFYLEQHFTYCNEVSLPWV*LWSLKC
Trigger: ACACTTCAGGGACCACAGGCATACCCAAGGGAGTGA...GACCTCATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR GCA 90 bp GACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGGAAGCCAATGTTTCTTaGCCACACGAATGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: DLLEGFPSCFQAGELIWGEANVS*PHECLL
Trigger: AAGAAGGCATTCGTGTGGGCAAGAAACATTGGCTTC...CCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR GCA 90 bp GCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACAACCCAGTCAAGATCTTaGCACAGCTTAGAAGCCTGT +
Preference number: 4 (lower is better)
Translates to: ALKRMAGSSREHLSNRRTTQSRS*HSLEAC
Trigger: ACAGGCTTCTAAGCTGTGGCAAGATCTTGACTGGGT...TGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR GCA 90 bp TATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTGGCAGATCTCCCCAATaGCATCCTTGTTCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: YQDLLEGFPSCFQAGELIGRSPQ*HPCSAG
Trigger: TCCAGCAGAACAAGGATGGCATTGGGGAGATCTGCC...AATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR GCA 90 bp AGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATGAGGTCTTCGGCAGATCTCCCCAATaGCATCCTTGTTCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: SRESFYLEQHFTYCNEVFGRSPQ*HPCSAG
Trigger: TCCAGCAGAACAAGGATGGCATTGGGGAGATCTGCC...GAAGACCTCATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR GCA 90 bp CTGGTTCACAGCATTGATGCCTTGCTGGATGGCCTTGTAGACCAGGGGGTCTTGTCAGCGTCAGCAACATaGTCAGAAACTTCAGTTTAT +
Preference number: 4 (lower is better)
Translates to: LVHSIDALLDGLVDQGVLSASAT*SETSVY
Trigger: ATAAACTGAAGTTTCTGAGCATGTTGCTGACGCTGA...CAAGACCCCCTGGTCTACAAGGCCATCCAGCAAGGCATCAATGCTGTGAACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590132.1
ENST00000681479.1
CDS-3UTR GCA 90 bp GAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTCTTTTCAATCCTCTGTaGATTGTTCATGGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: EGFPSCFQAGELIWGSSSLFNPL*IVHGFL
Trigger: CAGGAAGCCATGAACAATGCACAGAGGATTGAAAAG...AGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS-3UTR GCA 90 bp AGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGGAAGGGTTTCCCAGTTaGTTCCAGGCAGGTGAGTTG +
Preference number: 4 (lower is better)
Translates to: SRLPNRLPWSHDLKVLRKEGFPS*FQAGEL
Trigger: CAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTC...CTTTCTAAGGACCTTCAAGTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS-3UTR GCA 90 bp TCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGGAAGGGTTTCCCAGTTaGTTCCAGGCAGGTGAGTTG +
Preference number: 4 (lower is better)
Translates to: SSREHLSNRRTIKKLTNEEGFPS*FQAGEL
Trigger: CAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTC...CTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS-3UTR GCA 90 bp GTAAATCAGGCAGTTTTTAGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACGGTGTGCAGAAACCATaGTCCACAGCACACTGGCAC +
Preference number: 4 (lower is better)
Translates to: VNQAVFSRLPNRLPWSHDGVQKP*STAHWH
Trigger: GTGCCAGTGTGCTGTGGAGCATGGTTTCTGCACACC...GTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACTAAAAACTGCCTGATTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586696.5
CDS-3UTR CCA 90 bp AACAGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATGAGGTCACAGGTAGCCCCTCCTaGAAACCTGAACATGAGCTG +
Preference number: 4 (lower is better)
Translates to: NSRESFYLEQHFTYCNEVTGSPS*KPEHEL
Trigger: CAGCTCATGTTCAGGTTTCCAGGAGGGGCTACCTGT...GACCTCATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681525.1
CDS-3UTR CCA 90 bp AGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATGAGGTCTTCACAGGTAGCCCCTCCTaGAAACCTGAACATGAGCTG +
Preference number: 4 (lower is better)
Translates to: SRESFYLEQHFTYCNEVFTGSPS*KPEHEL
Trigger: CAGCTCATGTTCAGGTTTCCAGGAGGGGCTACCTGT...GAAGACCTCATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681525.1
CDS-3UTR CCA 90 bp CTGAAGTGCTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGATCTGGCAAGGCACCTaGAGCTGGGACATCTGGTCA +
Preference number: 4 (lower is better)
Translates to: LKCFIIRTYWKGFPVASRIWQGT*SWDIWS
Trigger: TGACCAGATGTCCCAGCTCCAGGTGCCTTGCCAGAT...CCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAGCACTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000681479.1
CDS-3UTR CCA 90 bp GCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACATCCTTCTTGAGTCTTTaGGGTTCCAGTCATTCCAGG +
Preference number: 4 (lower is better)
Translates to: ALKRMAGSSREHLSNRRTSFLSL*GSSHSR
Trigger: CCTGGAATGACTGGAACCCCAAAGACTCAAGAAGGA...TGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp CTGAAGTGCTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGGTCATCGGGGTCTCATaGCCTGGTCCGTGTTTGGAT +
Preference number: 4 (lower is better)
Translates to: LKCFIIRTYWKGFPVASRVIGVS*PGPCLD
Trigger: ATCCAAACACGGACCAGGCCATGAGACCCCGATGAC...CCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAGCACTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CCA 90 bp TCGATGACCTGCTCCAGTTGGGTGTCAGGGATACTTCTGCCAAGTTCCATGAAACTTGGATGCGAGGGCTaGATAAGTTCCAAATCGGTT +
Preference number: 4 (lower is better)
Translates to: SMTCSSWVSGILLPSSMKLGCEG*ISSKSV
Trigger: AACCGATTTGGAACTTATCCAGCCCTCGCATCCAAG...TTTCATGGAACTTGGCAGAAGTATCCCTGACACCCAACTGGAGCAGGTCATCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR CCA 90 bp GCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACACTTGGATGCGAGGGCTaGATAAGTTCCAAATCGGTT +
Preference number: 4 (lower is better)
Translates to: ALKRMAGSSREHLSNRRTLGCEG*ISSKSV
Trigger: AACCGATTTGGAACTTATCCAGCCCTCGCATCCAAG...TGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp TCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGAGGATACCAACTCCGTaGAAACGCTCCAAACCCAGC +
Preference number: 4 (lower is better)
Translates to: SSREHLSNRRTIKKLTNERIPTP*KRSKPS
Trigger: GCTGGGTTTGGAGCGTTTCCACGGAGTTGGTATCCT...CTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp CCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTTCAAATCTGAAACCTCGGCAGAGTTaGTGGCATAAATACCAACAC +
Preference number: 4 (lower is better)
Translates to: PSCFQAGELIWGSSSSNLKPRQS*WHKYQH
Trigger: GTGTTGGTATTTATGCCACCAACTCTGCCGAGGTTT...CAGATTTGAAGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
CDS-3UTR CCA 90 bp TCGATGACCTGCTCCAGTTGGGTGTCAGGGATACTTCTGCCAAGTTCCATGAAAATTGGCAGTCTGTACTaGATGATCGCTTTTAGGGGC +
Preference number: 4 (lower is better)
Translates to: SMTCSSWVSGILLPSSMKIGSLY*MIAFRG
Trigger: GCCCCTAAAAGCGATCATCCAGTACAGACTGCCAAT...TTTCATGGAACTTGGCAGAAGTATCCCTGACACCCAACTGGAGCAGGTCATCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR CCA 90 bp CTTCTGGCTCTCGATGACCTGCTCCAGTTGGGTGTCAGGGATACTTCTGCCAAGGTTGTTCTTCTTCATTaGCAGTCTGTACTGGATGAT +
Preference number: 4 (lower is better)
Translates to: LLALDDLLQLGVRDTSAKVVLLH*QSVLDD
Trigger: ATCATCCAGTACAGACTGCCAATGAAGAAGAACAAC...CTTGGCAGAAGTATCCCTGACACCCAACTGGAGCAGGTCATCGAGAGCCAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR CCA 90 bp GTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGAAACATGACCTGCTCCAGTTaGGTGTCAGGGATACTTCTG +
Preference number: 4 (lower is better)
Translates to: VWQVLLGSTSPTDEQSRNMTCSS*VSGILL
Trigger: CAGAAGTATCCCTGACACCCAACTGGAGCAGGTCAT...GTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp GTAAATCAGGCAGTTTTTAGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACTGGTTGGATATCGTGTaGGGTCCCGAGCTCTCACTC +
Preference number: 4 (lower is better)
Translates to: VNQAVFSRLPNRLPWSHDWLDIV*GPELSL
Trigger: GAGTGAGAGCTCGGGACCCCACACGATATCCAACCA...GTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACTAAAAACTGCCTGATTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp GAGCACCTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGGAATGTGGCAGGTCTCAACAGGAATaGGGGGCACATTTTCACCAC +
Preference number: 4 (lower is better)
Translates to: EHLSNRRTIKKLTNEECGRSQQE*GAHFHH
Trigger: GTGGTGAAAATGTGCCCCCCATTCCTGTTGAGACCT...GCCACATTCCTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp CCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTTCAAATCTGTCTGTGCATTGTTCATaGCTTCCTGGTTCACAGCAT +
Preference number: 4 (lower is better)
Translates to: PSCFQAGELIWGSSSSNLSVHCS*LPGSQH
Trigger: ATGCTGTGAACCAGGAAGCCATGAACAATGCACAGA...CAGATTTGAAGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CCA 90 bp GACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGGCTCTCCACCATAGATaGAAAAGTCCTTCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: DLLEGFPSCFQAGELIWGALHHR*KSPSPR
Trigger: TCTTGGAGAAGGACTTTTCCATCTATGGTGGAGAGC...CCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CCA 90 bp GAGCACCTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGGAATGTGGCCCCAATAGGCTTCCCTaGAGTCATGACTTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: EHLSNRRTIKKLTNEECGPNRLP*SHDLKV
Trigger: GACCTTCAAGTCATGACTCCAGGGAAGCCTATTGGG...GCCACATTCCTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp CCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTTCAAATCTGGCAGGTGAGTTGATTTaGGGGTCCAGTTCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: PSCFQAGELIWGSSSSNLAGELI*GSSSSN
Trigger: ATTTGAAGAACTGGACCCCCAAATCAACTCACCTGC...CAGATTTGAAGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CCA 90 bp AGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGTGCTCCACAGCACACTaGCACCTGTCACTCTTCAAG +
Preference number: 4 (lower is better)
Translates to: SRLPNRLPWSHDLKVLRKCSTAH*HLSLFK
Trigger: CTTGAAGAGTGACAGGTGCCAGTGTGCTGTGGAGCA...CTTTCTAAGGACCTTCAAGTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586696.5
CDS-3UTR CCA 90 bp AGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGCAATCTCAGTCACGGTaGATGCCTTCAGCGTCAGCA +
Preference number: 4 (lower is better)
Translates to: SRLPNRLPWSHDLKVLRKQSQSR*MPSASA
Trigger: TGCTGACGCTGAAGGCATCCACCGTGACTGAGATTG...CTTTCTAAGGACCTTCAAGTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681525.1
CDS-3UTR TCA 90 bp TCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGGCTCCAAACCCAGCTTaGTCAAGGATTTTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: SSREHLSNRRTIKKLTNEAPNPA*SRILQP
Trigger: AGGCTGCAAAATCCTTGATCAAGCTGGGTTTGGAGC...CTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp CTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGGCAGTCTGTACTGGATaGTCGCTTTTAGGGGCTCTA +
Preference number: 4 (lower is better)
Translates to: LYYQDLLEGFPSCFQAGEAVCTG*SLLGAL
Trigger: TAGAGCCCCTAAAAGCGATCATCCAGTACAGACTGC...CTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR TCA 90 bp TTGTTCATTTCTTATCTGTTCCCAAGGTCCAGATTGAGTCTGTCTTGTTTGCTGCCTTCTGGCTCTCGATaGCCTGCTCCAGTTGGGTGT +
Preference number: 4 (lower is better)
Translates to: LFISYLFPRSRLSLSCLLPSGSR*PAPVGC
Trigger: ACACCCAACTGGAGCAGGTCATCGAGAGCCAGAAGG...CAGCAAACAAGACAGACTCAATCTGGACCTTGGGAACAGATAAGAAATGAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587227.1
CDS-3UTR TCA 90 bp GAGTACAAGTTGTTGTTCTTCTTCATTGGCAGTCTGTACTGGATGATCGCTTTTCCTTCTGGCTCTCGATaGCCTGCTCCAGTTGGGTGT +
Preference number: 4 (lower is better)
Translates to: EYKLLFFFIGSLYWMIAFPSGSR*PAPVGC
Trigger: ACACCCAACTGGAGCAGGTCATCGAGAGCCAGAAGG...AAAAGCGATCATCCAGTACAGACTGCCAATGAAGAAGAACAACAACTTGTACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR TCA 90 bp CTTAAAAACAGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATCCTTCTGGCTCTCGATaGCCTGCTCCAGTTGGGTGT +
Preference number: 4 (lower is better)
Translates to: LKNSRESFYLEQHFTYCNPSGSR*PAPVGC
Trigger: ACACCCAACTGGAGCAGGTCATCGAGAGCCAGAAGG...ATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCTGTTTTTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp TTCATTTCTTATCTGTTCCCAAGGTCCAGATTGAGTCTGTCTTGTTTGCTGCTGATGAGCACTGCGCATTaGTTCGCCTTCTGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: FISYLFPRSRLSLSCLLLMSTAH*FAFWLS
Trigger: CGAGAGCCAGAAGGCGAATCAATGCGCAGTGCTCAT...CAGCAGCAAACAAGACAGACTCAATCTGGACCTTGGGAACAGATAAGAAATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587227.1
CDS-3UTR TCA 90 bp AGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATGAGGTCTTCTCCCTGAAGTGTAGATaGGCACTGCGCATTGATTCG +
Preference number: 4 (lower is better)
Translates to: SRESFYLEQHFTYCNEVFSLKCR*ALRIDS
Trigger: CGAATCAATGCGCAGTGCTCATCTACACTTCAGGGA...GAAGACCTCATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp TATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTCCCTGAAGTGTAGATaGGCACTGCGCATTGATTCG +
Preference number: 4 (lower is better)
Translates to: YQDLLEGFPSCFQAGELISLKCR*ALRIDS
Trigger: CGAATCAATGCGCAGTGCTCATCTACACTTCAGGGA...AATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR TCA 90 bp CTGAAGTGCTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGTATGCCTGTGGTCCCTaGAGTGTAGATGAGCACTGC +
Preference number: 4 (lower is better)
Translates to: LKCFIIRTYWKGFPVASRYACGP*SVDEHC
Trigger: GCAGTGCTCATCTACACTTCAGGGACCACAGGCATA...CCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAGCACTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR TCA 90 bp TCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGCACGTGATGTTGTCATaGCTGAGCATCACTCCCTTG +
Preference number: 4 (lower is better)
Translates to: SSREHLSNRRTIKKLTNEHVMLS*LSITPL
Trigger: CAAGGGAGTGATGCTCAGTCATGACAACATCACGTG...CTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp TATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTTTCCAGATAGCCCATaGAGATGTGCCTACCCCAGA +
Preference number: 4 (lower is better)
Translates to: YQDLLEGFPSCFQAGELIFPDSP*RCAYPR
Trigger: TCTGGGGTAGGCACATCTTCATGGGCTATCTGGAAA...AATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR TCA 90 bp AGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATGAGGTCTTCTTTCCAGATAGCCCATaGAGATGTGCCTACCCCAGA +
Preference number: 4 (lower is better)
Translates to: SRESFYLEQHFTYCNEVFFPDSP*RCAYPR
Trigger: TCTGGGGTAGGCACATCTTCATGGGCTATCTGGAAA...GAAGACCTCATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp TTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCGAACAATCAAGAAACTaGCCAATGAGGAATGTGGCT +
Preference number: 4 (lower is better)
Translates to: LLEGFPSCFQAGELIWGSEQSRN*PMRNVA
Trigger: AGCCACATTCCTCATTGGTCAGTTTCTTGATTGTTC...GGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS-3UTR GCA 90 bp CATGAAATCATCCCAAGAGTACAAGTTGTTGTTCTTCTTCATTGGCAGTCTGTAAACCTGAACATGAGCTaGCCCTTCCCAGCCCCCGTC +
Preference number: 4 (lower is better)
Translates to: HEIIPRVQVVVLLHWQSVNLNMS*PFPAPV
Trigger: GACGGGGGCTGGGAAGGGGCAGCTCATGTTCAGGTT...TACAGACTGCCAATGAAGAAGAACAACAACTTGTACTCTTGGGATGATTTCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587617.1
ENST00000592677.5
CDS-3UTR GCA 90 bp CCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTATTGCTAACCTGAACATGAGCTaGCCCTTCCCAGCCCCCGTC +
Preference number: 4 (lower is better)
Translates to: PWSHDLKVLRKIYSDFIANLNMS*PFPAPV
Trigger: GACGGGGGCTGGGAAGGGGCAGCTCATGTTCAGGTT...AGCAATAAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681525.1
CDS-3UTR GCA 90 bp GAAGTGCTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGTGCAGAAACCATaGTCCACAGCACTGTCACTC +
Preference number: 4 (lower is better)
Translates to: EVLYYQDLLEGFPSCFQAGVQKP*STALSL
Trigger: GAGTGACAGTGCTGTGGAGCATGGTTTCTGCACACC...TGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAGCACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588304.5
ENST00000588485.6
ENST00000681479.1
CDS-3UTR GCA 90 bp GATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACGGTGTGCAGAAACCATaGTCCACAGCACTGTCACTC +
Preference number: 4 (lower is better)
Translates to: DFIALKRMAGSSREHLSNGVQKP*STALSL
Trigger: GAGTGACAGTGCTGTGGAGCATGGTTTCTGCACACC...GTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000588304.5
ENST00000588485.6
ENST00000681479.1
ENST00000681525.1
CDS-3UTR GCA 90 bp TTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTTCAAATTTTGCCATTCTTGGATaGGAGGGCTGGATAAGTTCC +
Preference number: 4 (lower is better)
Translates to: FPSCFQAGELIWGSSSSNFAILG*EGWISS
Trigger: GGAACTTATCCAGCCCTCGCATCCAAGAATGGCAAA...ATTTGAAGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR GCA 90 bp CTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTAGGGGCTCTAGGCTaGTCTGTGGAATCGAAAGGA +
Preference number: 4 (lower is better)
Translates to: LYYQDLLEGFPSCFQAGELGALG*SVESKG
Trigger: TCCTTTCGATTCCACAGAGCAGCCTAGAGCCCCTAA...CTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
CDS-3UTR GCA 90 bp TGTTTCTTGCCCACACGAATGCCTTCTTCTTCAAGCCCATGGACTTGGCACTATACCCAGTCAAGATCTTaGCACAGCTTAGAAGCCTGT +
Preference number: 4 (lower is better)
Translates to: CFLPTRMPSSSSPWTWHYTQSRS*HSLEAC
Trigger: ACAGGCTTCTAAGCTGTGGCAAGATCTTGACTGGGT...ATAGTGCCAAGTCCATGGGCTTGAAGAAGAAGGCATTCGTGTGGGCAAGAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681479.1
CDS-3UTR GCA 90 bp GAAGTGCTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAACCAGGGGGTCTTGCTaGTTCACAATCTCAGTCACG +
Preference number: 4 (lower is better)
Translates to: EVLYYQDLLEGFPSCFQATRGSC*FTISVT
Trigger: CGTGACTGAGATTGTGAAGCAGCAAGACCCCCTGGT...TGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAGCACTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CCA 90 bp AGGCTTCCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTAGGCAGGAGGATGGGTaGTTTCCCTCCACAACAGGC +
Preference number: 4 (lower is better)
Translates to: RLPWSHDLKVLRKIYSDFRQEDG*FPSTTG
Trigger: GCCTGTTGTGGAGGGAAACCACCCATCCTCCTGCCT...AAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCAGGGAAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681525.1
CDS-3UTR CCA 90 bp AAGTTGTTGTTCTTCTTCATTGGCAGTCTGTACTGGATGATCGCTTTTAGGGGCACAGGTAGCCCCTCCTaGAAACCTGAACATGAGCTG +
Preference number: 4 (lower is better)
Translates to: KLLFFFIGSLYWMIAFRGTGSPS*KPEHEL
Trigger: CAGCTCATGTTCAGGTTTCCAGGAGGGGCTACCTGT...GCCCCTAAAAGCGATCATCCAGTACAGACTGCCAATGAAGAAGAACAACAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587617.1
ENST00000592677.5
CDS-3UTR CCA 90 bp CTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGGAATGTGGCTTCTTACAAGAGGTGTGGTTCTaGCCATCTGGCAAGGCACCT +
Preference number: 4 (lower is better)
Translates to: LSNRRTIKKLTNEECGFLQEVWF*PSGKAP
Trigger: AGGTGCCTTGCCAGATGGCCAGAACCACACCTCTTG...TAAGAAGCCACATTCCTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp CTGAAGTGCTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGGGCCTGGTCCGTGTTTaGATAGCCTCAGAAGGACTT +
Preference number: 4 (lower is better)
Translates to: LKCFIIRTYWKGFPVASRGLVRV*IASEGL
Trigger: AAGTCCTTCTGAGGCTATCCAAACACGGACCAGGCC...CCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAGCACTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CCA 90 bp GTAAATCAGGCAGTTTTTAGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACGGCCTGGTCCGTGTTTaGATAGCCTCAGAAGGACTT +
Preference number: 4 (lower is better)
Translates to: VNQAVFSRLPNRLPWSHDGLVRV*IASEGL
Trigger: AAGTCCTTCTGAGGCTATCCAAACACGGACCAGGCC...GTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACTAAAAACTGCCTGATTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp GAAGTGCTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAAGGATACCAACTCCGTaGAAACGCTCCAAACCCAGC +
Preference number: 4 (lower is better)
Translates to: EVLYYQDLLEGFPSCFQARIPTP*KRSKPS
Trigger: GCTGGGTTTGGAGCGTTTCCACGGAGTTGGTATCCT...TGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAGCACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CCA 90 bp GTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGAAACATTGGCAGTCTGTACTaGATGATCGCTTTTAGGGGC +
Preference number: 4 (lower is better)
Translates to: VWQVLLGSTSPTDEQSRNIGSLY*MIAFRG
Trigger: GCCCCTAAAAGCGATCATCCAGTACAGACTGCCAAT...GTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp GAGCACCTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGGAATGTGGCATTGGCAGTCTGTACTaGATGATCGCTTTTAGGGGC +
Preference number: 4 (lower is better)
Translates to: EHLSNRRTIKKLTNEECGIGSLY*MIAFRG
Trigger: GCCCCTAAAAGCGATCATCCAGTACAGACTGCCAAT...GCCACATTCCTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp TGGGTGTCAGGGATACTTCTGCCAAGTTCCATGAAATCATCCCAAGAGTACAAGATGACCTGCTCCAGTTaGGTGTCAGGGATACTTCTG +
Preference number: 4 (lower is better)
Translates to: WVSGILLPSSMKSSQEYKMTCSS*VSGILL
Trigger: CAGAAGTATCCCTGACACCCAACTGGAGCAGGTCAT...CTTGTACTCTTGGGATGATTTCATGGAACTTGGCAGAAGTATCCCTGACACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR CCA 90 bp AGTGCTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGATGACCTGCTCCAGTTaGGTGTCAGGGATACTTCTG +
Preference number: 4 (lower is better)
Translates to: SALLSGLIGRVSQLLPGRMTCSS*VSGILL
Trigger: CAGAAGTATCCCTGACACCCAACTGGAGCAGGTCAT...CCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CCA 90 bp CCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTTCAAATCTGCCATCCTTGTTCTGCTaGAACAGCATATTCTTACAC +
Preference number: 4 (lower is better)
Translates to: PSCFQAGELIWGSSSSNLPSLFC*NSIFLH
Trigger: GTGTAAGAATATGCTGTTCCAGCAGAACAAGGATGG...CAGATTTGAAGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CCA 90 bp AAGATATACAGTGATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCCCAGACCGTCCAGCTaGCCCAGATCCCCAGAGTGT +
Preference number: 4 (lower is better)
Translates to: KIYSDFIALKRMAGSSREPRPSS*PRSPEC
Trigger: ACACTCTGGGGATCTGGGCCAGCTGGACGGTCTGGG...CTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATCACTGTATATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp CTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGAGGTCTCAACAGGAATaGGGGGCACATTTTCACCAC +
Preference number: 4 (lower is better)
Translates to: LYYQDLLEGFPSCFQAGERSQQE*GAHFHH
Trigger: GTGGTGAAAATGTGCCCCCCATTCCTGTTGAGACCT...CTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CCA 90 bp AACAGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATGAGGTCCCCAATAGGCTTCCCTaGAGTCATGACTTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: NSRESFYLEQHFTYCNEVPNRLP*SHDLKV
Trigger: GACCTTCAAGTCATGACTCCAGGGAAGCCTATTGGG...GACCTCATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp GCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACAGCAGGTGAGTTGATTTaGGGGTCCAGTTCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: ALKRMAGSSREHLSNRRTAGELI*GSSSSN
Trigger: ATTTGAAGAACTGGACCCCCAAATCAACTCACCTGC...TGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp CTGAAGTGCTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGGCAGTCTGTACTGGATaGTCGCTTTTAGGGGCTCTA +
Preference number: 4 (lower is better)
Translates to: LKCFIIRTYWKGFPVASRAVCTG*SLLGAL
Trigger: TAGAGCCCCTAAAAGCGATCATCCAGTACAGACTGC...CCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAGCACTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR TCA 90 bp CATGAAATCATCCCAAGAGTACAAGTTGTTGTTCTTCTTCATTGGCAGTCTGTACCTTCTGGCTCTCGATaGCCTGCTCCAGTTGGGTGT +
Preference number: 4 (lower is better)
Translates to: HEIIPRVQVVVLLHWQSVPSGSR*PAPVGC
Trigger: ACACCCAACTGGAGCAGGTCATCGAGAGCCAGAAGG...TACAGACTGCCAATGAAGAAGAACAACAACTTGTACTCTTGGGATGATTTCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR TCA 90 bp GATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACTTACCAAGGTGCCCTTaGGAGCATCTGCTTGAGCAA +
Preference number: 4 (lower is better)
Translates to: DFIALKRMAGSSREHLSNLPRCP*EHLLEQ
Trigger: TTGCTCAAGCAGATGCTCTCAAGGGCACCTTGGTAA...GTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp GTAAATCAGGCAGTTTTTAGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACTTTCCAGATAGCCCATaGAGATGTGCCTACCCCAGA +
Preference number: 4 (lower is better)
Translates to: VNQAVFSRLPNRLPWSHDFPDSP*RCAYPR
Trigger: TCTGGGGTAGGCACATCTTCATGGGCTATCTGGAAA...GTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACTAAAAACTGCCTGATTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp CTGAAGTGCTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGGGTTCTCCGCTCATCTaGTTCATCTCACACTTCAGC +
Preference number: 4 (lower is better)
Translates to: LKCFIIRTYWKGFPVASRGSPLI*FISHFS
Trigger: GCTGAAGTGTGAGATGAATCAGATGAGCGGAGAACC...CCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAGCACTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR TCA 90 bp AGGCTTCCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTGACCCCGACAGAAGTTaGTGGCCTCGAAGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: RLPWSHDLKVLRKIYSDFDPDRS*WPRSSA
Trigger: AGCTGAACTTCGAGGCCATCAACTTCTGTCGGGGTC...AAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCAGGGAAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR TCA 90 bp TTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTTCAAATAGTCCTTCTCCAAGATaGCCCACTTTTCAATCCTCT +
Preference number: 4 (lower is better)
Translates to: FPSCFQAGELIWGSSSSNSPSPR*PTFQSS
Trigger: AGAGGATTGAAAAGTGGGTCATCTTGGAGAAGGACT...ATTTGAAGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS-3UTR TCA 90 bp TTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTTCAAATTTTCACTTATTGCAATaGGGTCTTCCTGCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: FPSCFQAGELIWGSSSSNFHLLQ*GLPAEG
Trigger: GCCTTCAGCAGGAAGACCTCATTGCAATAAGTGAAA...ATTTGAAGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS-3UTR TCA 90 bp GACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGCAAGAAACTGACCAATaGGGAATGTGGCTTCTTAAA +
Preference number: 4 (lower is better)
Translates to: DLLEGFPSCFQAGELIWGQETDQ*GMWLLK
Trigger: TTTAAGAAGCCACATTCCTCATTGGTCAGTTTCTTG...CCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS-3UTR TCA 90 bp TTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCCAAGAAACTGACCAATaGGGAATGTGGCTTCTTAAA +
Preference number: 4 (lower is better)
Translates to: LLEGFPSCFQAGELIWGSQETDQ*GMWLLK
Trigger: TTTAAGAAGCCACATTCCTCATTGGTCAGTTTCTTG...GGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS-3UTR TCA 90 bp GAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTGTGATTTTATTGCTTTaGAACGTATGGCAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: EGFPSCFQAGELIWGSSSVILLL*NVWQVL
Trigger: AAGAACCTGCCATACGTTTCAAAGCAATAAAATCAC...AGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS-3UTR TCA 90 bp AGGTTCTCCGCTCATCTGATTCATCTCACACTTCAGCGTCAGCAACATGCTCAGCCTGGAGTCATGACTTaGAGGTCCTTAGAAAGATAT +
Preference number: 4 (lower is better)
Translates to: RFSAHLIHLTLQRQQHAQPGVMT*RSLERY
Trigger: ATATCTTTCTAAGGACCTTCAAGTCATGACTCCAGG...CTGAGCATGTTGCTGACGCTGAAGTGTGAGATGAATCAGATGAGCGGAGAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681479.1
CDS-3UTR TCA 90 bp AGGCTTCCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTTTGCTTCCAGGCAGGTaGGTTGATTTGGGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: RLPWSHDLKVLRKIYSDFLLPGR*VDLGVQ
Trigger: CTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAA...AAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCAGGGAAGCCT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp AAGTTGTTGTTCTTCTTCATTGGCAGTCTGTACTGGATGATCGCTTTTAGGGGCGTACGTTGTCATGACTaGGCATCACTCCCTTGGGTA +
Preference number: 4 (lower is better)
Translates to: KLLFFFIGSLYWMIAFRGVRCHD*ASLPWV
Trigger: TACCCAAGGGAGTGATGCTCAGTCATGACAACGTAC...GCCCCTAAAAGCGATCATCCAGTACAGACTGCCAATGAAGAAGAACAACAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592677.5
CDS-3UTR GCA 90 bp AACAGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATGAGGTCCTTGATCAAGGATTTTaGAGCCTTCCGACAAGCCTC +
Preference number: 4 (lower is better)
Translates to: NSRESFYLEQHFTYCNEVLDQGF*SLPTSL
Trigger: GAGGCTTGTCGGAAGGCTGCAAAATCCTTGATCAAG...GACCTCATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR GCA 90 bp TATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTAGTGTAGATGAGCACTaGGCATTGATTCGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: YQDLLEGFPSCFQAGELISVDEH*ALIRLL
Trigger: CAGAAGGCGAATCAATGCGCAGTGCTCATCTACACT...AATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR GCA 90 bp TTCATTTCTTATCTGTTCCCAAGGTCCAGATTGAGTCTGTCTTGTTTGCTGCTGTCACTCCCTTGGGTATaGCTGTGGTCCCTGAAGTGT +
Preference number: 4 (lower is better)
Translates to: FISYLFPRSRLSLSCLLLSLPWV*LWSLKC
Trigger: ACACTTCAGGGACCACAGGCATACCCAAGGGAGTGA...CAGCAGCAAACAAGACAGACTCAATCTGGACCTTGGGAACAGATAAGAAATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587227.1
CDS-3UTR GCA 90 bp CTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGGAATGTGGCTTCTTATCACTCCCTTGGGTATaGCTGTGGTCCCTGAAGTGT +
Preference number: 4 (lower is better)
Translates to: LSNRRTIKKLTNEECGFLSLPWV*LWSLKC
Trigger: ACACTTCAGGGACCACAGGCATACCCAAGGGAGTGA...TAAGAAGCCACATTCCTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR GCA 90 bp TCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGTCTTGCCCACACGAATaGCTTCTTCTTCAAGCCCAT +
Preference number: 4 (lower is better)
Translates to: SSREHLSNRRTIKKLTNESCPHE*LLLQAH
Trigger: ATGGGCTTGAAGAAGAAGGCATTCGTGTGGGCAAGA...CTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR GCA 90 bp TATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTCTTGCCCACACGAATaGCTTCTTCTTCAAGCCCAT +
Preference number: 4 (lower is better)
Translates to: YQDLLEGFPSCFQAGELISCPHE*LLLQAH
Trigger: ATGGGCTTGAAGAAGAAGGCATTCGTGTGGGCAAGA...AATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR GCA 90 bp CTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGACCCAGTCAAGATCTTaGCACAGCTTAGAAGCCTGT +
Preference number: 4 (lower is better)
Translates to: LYYQDLLEGFPSCFQAGETQSRS*HSLEAC
Trigger: ACAGGCTTCTAAGCTGTGGCAAGATCTTGACTGGGT...CTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR GCA 90 bp AGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATGAGGTCTTCACCCAGTCAAGATCTTaGCACAGCTTAGAAGCCTGT +
Preference number: 4 (lower is better)
Translates to: SRESFYLEQHFTYCNEVFTQSRS*HSLEAC
Trigger: ACAGGCTTCTAAGCTGTGGCAAGATCTTGACTGGGT...GAAGACCTCATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR GCA 90 bp TTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCTCAGCGTCAGCAACATaGTCAGAAACTTCAGTTTAT +
Preference number: 4 (lower is better)
Translates to: LLEGFPSCFQAGELIWGSSASAT*SETSVY
Trigger: ATAAACTGAAGTTTCTGAGCATGTTGCTGACGCTGA...GGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS-3UTR GCA 90 bp GACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCAGCGTCAGCAACATaGTCAGAAACTTCAGTTTAT +
Preference number: 4 (lower is better)
Translates to: DLLEGFPSCFQAGELIWGSASAT*SETSVY
Trigger: ATAAACTGAAGTTTCTGAGCATGTTGCTGACGCTGA...CCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CCA 90 bp AGGCTTCCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTCAAGAGGTGTGGTTCTaGCCATCTGGCAAGGCACCT +
Preference number: 4 (lower is better)
Translates to: RLPWSHDLKVLRKIYSDFQEVWF*PSGKAP
Trigger: AGGTGCCTTGCCAGATGGCCAGAACCACACCTCTTG...AAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCAGGGAAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp TCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGTCCTTCTTGAGTCTTTaGGGTTCCAGTCATTCCAGG +
Preference number: 4 (lower is better)
Translates to: SSREHLSNRRTIKKLTNESFLSL*GSSHSR
Trigger: CCTGGAATGACTGGAACCCCAAAGACTCAAGAAGGA...CTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp AACAGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATGAGGTCCTTGGATGCGAGGGCTaGATAAGTTCCAAATCGGTT +
Preference number: 4 (lower is better)
Translates to: NSRESFYLEQHFTYCNEVLGCEG*ISSKSV
Trigger: AACCGATTTGGAACTTATCCAGCCCTCGCATCCAAG...GACCTCATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp AGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGCTTGGATGCGAGGGCTaGATAAGTTCCAAATCGGTT +
Preference number: 4 (lower is better)
Translates to: SRLPNRLPWSHDLKVLRKLGCEG*ISSKSV
Trigger: AACCGATTTGGAACTTATCCAGCCCTCGCATCCAAG...CTTTCTAAGGACCTTCAAGTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp TCCCAAGAGTACAAGTTGTTGTTCTTCTTCATTGGCAGTCTGTACTGGATGATCAGGATACCAACTCCGTaGAAACGCTCCAAACCCAGC +
Preference number: 4 (lower is better)
Translates to: SQEYKLLFFFIGSLYWMIRIPTP*KRSKPS
Trigger: GCTGGGTTTGGAGCGTTTCCACGGAGTTGGTATCCT...GATCATCCAGTACAGACTGCCAATGAAGAAGAACAACAACTTGTACTCTTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR CCA 90 bp AACAGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATGAGGTCATTGGCAGTCTGTACTaGATGATCGCTTTTAGGGGC +
Preference number: 4 (lower is better)
Translates to: NSRESFYLEQHFTYCNEVIGSLY*MIAFRG
Trigger: GCCCCTAAAAGCGATCATCCAGTACAGACTGCCAAT...GACCTCATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp GATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACATGACCTGCTCCAGTTaGGTGTCAGGGATACTTCTG +
Preference number: 4 (lower is better)
Translates to: DFIALKRMAGSSREHLSNMTCSS*VSGILL
Trigger: CAGAAGTATCCCTGACACCCAACTGGAGCAGGTCAT...GTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp TTTCTTGTAAATCAGGCAGTTTTTAGTAGACTTCCCAATAGGCTTCCCTGGAGTTGGTTGGATATCGTGTaGGGTCCCGAGCTCTCACTC +
Preference number: 4 (lower is better)
Translates to: FLVNQAVFSRLPNRLPWSWLDIV*GPELSL
Trigger: GAGTGAGAGCTCGGGACCCCACACGATATCCAACCA...ACTCCAGGGAAGCCTATTGGGAAGTCTACTAAAAACTGCCTGATTTACAAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp TGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTATTGCTTTGCCCAGACCGTCCAGCTaGCCCAGATCCCCAGAGTGT +
Preference number: 4 (lower is better)
Translates to: WSHDLKVLRKIYSDFIALPRPSS*PRSPEC
Trigger: ACACTCTGGGGATCTGGGCCAGCTGGACGGTCTGGG...CAAAGCAATAAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp CTGAAGTGCTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGAGGTCTCAACAGGAATaGGGGGCACATTTTCACCAC +
Preference number: 4 (lower is better)
Translates to: LKCFIIRTYWKGFPVASRRSQQE*GAHFHH
Trigger: GTGGTGAAAATGTGCCCCCCATTCCTGTTGAGACCT...CCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAGCACTTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CCA 90 bp GAGCACCTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGGAATGTGGCTCTGTGCATTGTTCATaGCTTCCTGGTTCACAGCAT +
Preference number: 4 (lower is better)
Translates to: EHLSNRRTIKKLTNEECGSVHCS*LPGSQH
Trigger: ATGCTGTGAACCAGGAAGCCATGAACAATGCACAGA...GCCACATTCCTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp AAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGTCTGTGCATTGTTCATaGCTTCCTGGTTCACAGCAT +
Preference number: 4 (lower is better)
Translates to: KRMAGSSREHLSNRRTIKSVHCS*LPGSQH
Trigger: ATGCTGTGAACCAGGAAGCCATGAACAATGCACAGA...CTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp AAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGGCTCTCCACCATAGATaGAAAAGTCCTTCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: KRMAGSSREHLSNRRTIKALHHR*KSPSPR
Trigger: TCTTGGAGAAGGACTTTTCCATCTATGGTGGAGAGC...CTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp GTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGAAACGCTCTCCACCATAGATaGAAAAGTCCTTCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: VWQVLLGSTSPTDEQSRNALHHR*KSPSPR
Trigger: TCTTGGAGAAGGACTTTTCCATCTATGGTGGAGAGC...GTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp CGAATGCCTTCTTCTTCAAGCCCATGGACTTGGCACTATTTTTCTTCACCATCTCCCAATAGGCTTCCCTaGAGTCATGACTTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: RMPSSSSPWTWHYFSSPSPNRLP*SHDLKV
Trigger: GACCTTCAAGTCATGACTCCAGGGAAGCCTATTGGG...AGATGGTGAAGAAAAATAGTGCCAAGTCCATGGGCTTGAAGAAGAAGGCATTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681479.1
CDS-3UTR CCA 90 bp TTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTTCAAATGCAGGTGAGTTGATTTaGGGGTCCAGTTCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: FPSCFQAGELIWGSSSSNAGELI*GSSSSN
Trigger: ATTTGAAGAACTGGACCCCCAAATCAACTCACCTGC...ATTTGAAGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CCA 90 bp CCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTTCAAATCTGATTATCAGGACTTATTaGAAGGGTTTCCCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: PSCFQAGELIWGSSSSNLIIRTY*KGFPVA
Trigger: AGCAACTGGGAAACCCTTCCAATAAGTCCTGATAAT...CAGATTTGAAGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS-3UTR TCA 90 bp ACCTGCTCCAGTTGGGTGTCAGGGATACTTCTGCCAAGTTCCATGAAATCATCCCCTCATAGTACTGGTTaGAATTCAGAATTTCCCACT +
Preference number: 4 (lower is better)
Translates to: TCSSWVSGILLPSSMKSSPHSTG*NSEFPT
Trigger: AGTGGGAAATTCTGAATTTCAACCAGTACTATGAGG...GGATGATTTCATGGAACTTGGCAGAAGTATCCCTGACACCCAACTGGAGCAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR TCA 90 bp GACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGATTTTCTGTAACTGTTaGTCATTCTCAACCAGCAAG +
Preference number: 4 (lower is better)
Translates to: DLLEGFPSCFQAGELIWGIFCNC*SFSTSK
Trigger: CTTGCTGGTTGAGAATGATCAACAGTTACAGAAAAT...CCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
CDS-3UTR TCA 90 bp TTCATTTCTTATCTGTTCCCAAGGTCCAGATTGAGTCTGTCTTGTTTGCTGCTGGCAGTCTGTACTGGATaGTCGCTTTTAGGGGCTCTA +
Preference number: 4 (lower is better)
Translates to: FISYLFPRSRLSLSCLLLAVCTG*SLLGAL
Trigger: TAGAGCCCCTAAAAGCGATCATCCAGTACAGACTGC...CAGCAGCAAACAAGACAGACTCAATCTGGACCTTGGGAACAGATAAGAAATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587227.1
CDS-3UTR TCA 90 bp AAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGTTCTGCCAAGTTCCATaGAATCATCCCAAGAGTACA +
Preference number: 4 (lower is better)
Translates to: KRMAGSSREHLSNRRTIKFCQVP*NHPKST
Trigger: TGTACTCTTGGGATGATTTCATGGAACTTGGCAGAA...CTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp TCCAGTTGGGTGTCAGGGATACTTCTGCCAAGTTCCATGAAATCATCCCAAGAGTTCTGCCAAGTTCCATaGAATCATCCCAAGAGTACA +
Preference number: 4 (lower is better)
Translates to: SSWVSGILLPSSMKSSQEFCQVP*NHPKST
Trigger: TGTACTCTTGGGATGATTTCATGGAACTTGGCAGAA...CTCTTGGGATGATTTCATGGAACTTGGCAGAAGTATCCCTGACACCCAACTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR TCA 90 bp TTCATTTCTTATCTGTTCCCAAGGTCCAGATTGAGTCTGTCTTGTTTGCTGCTGTCCCTGAAGTGTAGATaGGCACTGCGCATTGATTCG +
Preference number: 4 (lower is better)
Translates to: FISYLFPRSRLSLSCLLLSLKCR*ALRIDS
Trigger: CGAATCAATGCGCAGTGCTCATCTACACTTCAGGGA...CAGCAGCAAACAAGACAGACTCAATCTGGACCTTGGGAACAGATAAGAAATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587227.1
CDS-3UTR TCA 90 bp CTTAAAAACAGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATTATGCCTGTGGTCCCTaGAGTGTAGATGAGCACTGC +
Preference number: 4 (lower is better)
Translates to: LKNSRESFYLEQHFTYCNYACGP*SVDEHC
Trigger: GCAGTGCTCATCTACACTTCAGGGACCACAGGCATA...ATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCTGTTTTTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp GAGTACAAGTTGTTGTTCTTCTTCATTGGCAGTCTGTACTGGATGATCGCTTTTTATGCCTGTGGTCCCTaGAGTGTAGATGAGCACTGC +
Preference number: 4 (lower is better)
Translates to: EYKLLFFFIGSLYWMIAFYACGP*SVDEHC
Trigger: GCAGTGCTCATCTACACTTCAGGGACCACAGGCATA...AAAAGCGATCATCCAGTACAGACTGCCAATGAAGAAGAACAACAACTTGTACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR TCA 90 bp CCAATGCCATCCTTGTTCTGCTGGAACAGCATATTCTTACACCCAGTCAAGATCAGTCCTTCTCCAAGATaGCCCACTTTTCAATCCTCT +
Preference number: 4 (lower is better)
Translates to: PMPSLFCWNSIFLHPVKISPSPR*PTFQSS
Trigger: AGAGGATTGAAAAGTGGGTCATCTTGGAGAAGGACT...GATCTTGACTGGGTGTAAGAATATGCTGTTCCAGCAGAACAAGGATGGCATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681479.1
CDS-3UTR TCA 90 bp CAAGATGACCCACTTTTCAATCCTCTGTGCATTGTTCATGGCTTCCTGGTTCACTTTCACTTATTGCAATaGGGTCTTCCTGCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: QDDPLFNPLCIVHGFLVHFHLLQ*GLPAEG
Trigger: GCCTTCAGCAGGAAGACCTCATTGCAATAAGTGAAA...GTGAACCAGGAAGCCATGAACAATGCACAGAGGATTGAAAAGTGGGTCATCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590132.1
ENST00000681479.1
CDS-3UTR TCA 90 bp AAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGGAACAATCAAGAAACTaGCCAATGAGGAATGTGGCT +
Preference number: 4 (lower is better)
Translates to: KRMAGSSREHLSNRRTIKEQSRN*PMRNVA
Trigger: AGCCACATTCCTCATTGGTCAGTTTCTTGATTGTTC...CTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp TTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTTCAAATGAACAATCAAGAAACTaGCCAATGAGGAATGTGGCT +
Preference number: 4 (lower is better)
Translates to: FPSCFQAGELIWGSSSSNEQSRN*PMRNVA
Trigger: AGCCACATTCCTCATTGGTCAGTTTCTTGATTGTTC...ATTTGAAGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS-3UTR TCA 90 bp TTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTTCAAATCCTGGAGTCATGACTTaGAGGTCCTTAGAAAGATAT +
Preference number: 4 (lower is better)
Translates to: FPSCFQAGELIWGSSSSNPGVMT*RSLERY
Trigger: ATATCTTTCTAAGGACCTTCAAGTCATGACTCCAGG...ATTTGAAGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS-3UTR TCA 90 bp AAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGCCTGGAGTCATGACTTaGAGGTCCTTAGAAAGATAT +
Preference number: 4 (lower is better)
Translates to: KRMAGSSREHLSNRRTIKPGVMT*RSLERY
Trigger: ATATCTTTCTAAGGACCTTCAAGTCATGACTCCAGG...CTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp AGGCTTCCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTTCCAGGCAGGTGAGTTaGTTTGGGGGTCCAGTTCTT +
Preference number: 4 (lower is better)
Translates to: RLPWSHDLKVLRKIYSDFSRQVS*FGGPVL
Trigger: AAGAACTGGACCCCCAAATCAACTCACCTGCCTGGA...AAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCAGGGAAGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR GCA 90 bp GTAAATCAGGCAGTTTTTAGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACCTTGATCAAGGATTTTaGAGCCTTCCGACAAGCCTC +
Preference number: 4 (lower is better)
Translates to: VNQAVFSRLPNRLPWSHDLDQGF*SLPTSL
Trigger: GAGGCTTGTCGGAAGGCTGCAAAATCCTTGATCAAG...GTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACTAAAAACTGCCTGATTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR GCA 90 bp TTTCTTGTAAATCAGGCAGTTTTTAGTAGACTTCCCAATAGGCTTCCCTGGAGTTCACTCCCTTGGGTATaGCTGTGGTCCCTGAAGTGT +
Preference number: 4 (lower is better)
Translates to: FLVNQAVFSRLPNRLPWSSLPWV*LWSLKC
Trigger: ACACTTCAGGGACCACAGGCATACCCAAGGGAGTGA...ACTCCAGGGAAGCCTATTGGGAAGTCTACTAAAAACTGCCTGATTTACAAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR GCA 90 bp TCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGGAAGCCAATGTTTCTTaGCCACACGAATGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: SSREHLSNRRTIKKLTNEEANVS*PHECLL
Trigger: AAGAAGGCATTCGTGTGGGCAAGAAACATTGGCTTC...CTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR GCA 90 bp GTAAATCAGGCAGTTTTTAGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACACCCAGTCAAGATCTTaGCACAGCTTAGAAGCCTGT +
Preference number: 4 (lower is better)
Translates to: VNQAVFSRLPNRLPWSHDTQSRS*HSLEAC
Trigger: ACAGGCTTCTAAGCTGTGGCAAGATCTTGACTGGGT...GTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACTAAAAACTGCCTGATTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR GCA 90 bp AGGCTTCCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTGGCAGATCTCCCCAATaGCATCCTTGTTCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: RLPWSHDLKVLRKIYSDFGRSPQ*HPCSAG
Trigger: TCCAGCAGAACAAGGATGGCATTGGGGAGATCTGCC...AAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCAGGGAAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR GCA 90 bp GCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACATCAGCGTCAGCAACATaGTCAGAAACTTCAGTTTAT +
Preference number: 4 (lower is better)
Translates to: ALKRMAGSSREHLSNRRTSASAT*SETSVY
Trigger: ATAAACTGAAGTTTCTGAGCATGTTGCTGACGCTGA...TGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR GCA 90 bp AGGCTTCCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTACCAGGGGGTCTTGCTaGTTCACAATCTCAGTCACG +
Preference number: 4 (lower is better)
Translates to: RLPWSHDLKVLRKIYSDFTRGSC*FTISVT
Trigger: CGTGACTGAGATTGTGAAGCAGCAAGACCCCCTGGT...AAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCAGGGAAGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR GCA 90 bp CTTAAAAACAGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATACCAGGGGGTCTTGCTaGTTCACAATCTCAGTCACG +
Preference number: 4 (lower is better)
Translates to: LKNSRESFYLEQHFTYCNTRGSC*FTISVT
Trigger: CGTGACTGAGATTGTGAAGCAGCAAGACCCCCTGGT...ATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCTGTTTTTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR GCA 90 bp GAGCACCTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGGAATGTGGCCTTTTCAATCCTCTGTaGATTGTTCATGGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: EHLSNRRTIKKLTNEECGLFNPL*IVHGFL
Trigger: CAGGAAGCCATGAACAATGCACAGAGGATTGAAAAG...GCCACATTCCTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp AAGATATACAGTGATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGAGGCAGGAGGATGGGTaGTTTCCCTCCACAACAGGC +
Preference number: 4 (lower is better)
Translates to: KIYSDFIALKRMAGSSRERQEDG*FPSTTG
Trigger: GCCTGTTGTGGAGGGAAACCACCCATCCTCCTGCCT...CTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATCACTGTATATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681525.1
CDS-3UTR CCA 90 bp TTTCTTGTAAATCAGGCAGTTTTTAGTAGACTTCCCAATAGGCTTCCCTGGAGTACAGGTAGCCCCTCCTaGAAACCTGAACATGAGCTG +
Preference number: 4 (lower is better)
Translates to: FLVNQAVFSRLPNRLPWSTGSPS*KPEHEL
Trigger: CAGCTCATGTTCAGGTTTCCAGGAGGGGCTACCTGT...ACTCCAGGGAAGCCTATTGGGAAGTCTACTAAAAACTGCCTGATTTACAAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681525.1
CDS-3UTR CCA 90 bp CTGAAGTGCTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGTGGAGCTGGGACATCTaGTCACTCAGGTGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: LKCFIIRTYWKGFPVASRWSWDI*SLRCFL
Trigger: AAGAAAACACCTGAGTGACCAGATGTCCCAGCTCCA...CCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAGCACTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CCA 90 bp CTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGGAATGTGGCTTCTTAACTCTTCAAGAGGTGTaGTTCTGGCCATCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: LSNRRTIKKLTNEECGFLTLQEV*FWPSGK
Trigger: CTTGCCAGATGGCCAGAACCACACCTCTTGAAGAGT...TAAGAAGCCACATTCCTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp GATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACTCCTTCTTGAGTCTTTaGGGTTCCAGTCATTCCAGG +
Preference number: 4 (lower is better)
Translates to: DFIALKRMAGSSREHLSNSFLSL*GSSHSR
Trigger: CCTGGAATGACTGGAACCCCAAAGACTCAAGAAGGA...GTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp AAGTTGTTGTTCTTCTTCATTGGCAGTCTGTACTGGATGATCGCTTTTAGGGGCTCCTTCTTGAGTCTTTaGGGTTCCAGTCATTCCAGG +
Preference number: 4 (lower is better)
Translates to: KLLFFFIGSLYWMIAFRGSFLSL*GSSHSR
Trigger: CCTGGAATGACTGGAACCCCAAAGACTCAAGAAGGA...GCCCCTAAAAGCGATCATCCAGTACAGACTGCCAATGAAGAAGAACAACAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR CCA 90 bp GTAAATCAGGCAGTTTTTAGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACTCCTTCTTGAGTCTTTaGGGTTCCAGTCATTCCAGG +
Preference number: 4 (lower is better)
Translates to: VNQAVFSRLPNRLPWSHDSFLSL*GSSHSR
Trigger: CCTGGAATGACTGGAACCCCAAAGACTCAAGAAGGA...GTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACTAAAAACTGCCTGATTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp AGGCTTCCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTGGCCTGGTCCGTGTTTaGATAGCCTCAGAAGGACTT +
Preference number: 4 (lower is better)
Translates to: RLPWSHDLKVLRKIYSDFGLVRV*IASEGL
Trigger: AAGTCCTTCTGAGGCTATCCAAACACGGACCAGGCC...AAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCAGGGAAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp CTGAAGTGCTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCTTGGATGCGAGGGCTaGATAAGTTCCAAATCGGTT +
Preference number: 4 (lower is better)
Translates to: LKCFIIRTYWKGFPVASRLGCEG*ISSKSV
Trigger: AACCGATTTGGAACTTATCCAGCCCTCGCATCCAAG...CCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAGCACTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CCA 90 bp CTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGCCTCGGCAGAGTTGGTaGCATAAATACCAACACAAA +
Preference number: 4 (lower is better)
Translates to: LYYQDLLEGFPSCFQAGEPRQSW*HKYQHK
Trigger: TTTGTGTTGGTATTTATGCCACCAACTCTGCCGAGG...CTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
CDS-3UTR CCA 90 bp AGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATGAGGTCTTCCCTCGGCAGAGTTGGTaGCATAAATACCAACACAAA +
Preference number: 4 (lower is better)
Translates to: SRESFYLEQHFTYCNEVFPRQSW*HKYQHK
Trigger: TTTGTGTTGGTATTTATGCCACCAACTCTGCCGAGG...GAAGACCTCATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681525.1
CDS-3UTR CCA 90 bp TTGGGTGTCAGGGATACTTCTGCCAAGTTCCATGAAATCATCCCAAGAGTACAAATTGGCAGTCTGTACTaGATGATCGCTTTTAGGGGC +
Preference number: 4 (lower is better)
Translates to: LGVRDTSAKFHEIIPRVQIGSLY*MIAFRG
Trigger: GCCCCTAAAAGCGATCATCCAGTACAGACTGCCAAT...TTGTACTCTTGGGATGATTTCATGGAACTTGGCAGAAGTATCCCTGACACCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR CCA 90 bp GCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACAGTTGTTCTTCTTCATTaGCAGTCTGTACTGGATGAT +
Preference number: 4 (lower is better)
Translates to: ALKRMAGSSREHLSNRRTVVLLH*QSVLDD
Trigger: ATCATCCAGTACAGACTGCCAATGAAGAAGAACAAC...TGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp AAGATATACAGTGATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGAACTCGGCAGTCTCTTaGTTGAGGGGCGCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: KIYSDFIALKRMAGSSRENSAVS*LRGAVP
Trigger: TGGGACTGCGCCCCTCAACCAAGAGACTGCCGAGTT...CTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATCACTGTATATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp ATATACAGTGATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACTGGTTGGATATCGTGTaGGGTCCCGAGCTCTCACTC +
Preference number: 4 (lower is better)
Translates to: IYSDFIALKRMAGSSREHWLDIV*GPELSL
Trigger: GAGTGAGAGCTCGGGACCCCACACGATATCCAACCA...GTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATCACTGTATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp AAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGCCATCCTTGTTCTGCTaGAACAGCATATTCTTACAC +
Preference number: 4 (lower is better)
Translates to: KRMAGSSREHLSNRRTIKPSLFC*NSIFLH
Trigger: GTGTAAGAATATGCTGTTCCAGCAGAACAAGGATGG...CTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp GTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGAAACCCATCCTTGTTCTGCTaGAACAGCATATTCTTACAC +
Preference number: 4 (lower is better)
Translates to: VWQVLLGSTSPTDEQSRNPSLFC*NSIFLH
Trigger: GTGTAAGAATATGCTGTTCCAGCAGAACAAGGATGG...GTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp TATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTCTGTGCATTGTTCATaGCTTCCTGGTTCACAGCAT +
Preference number: 4 (lower is better)
Translates to: YQDLLEGFPSCFQAGELISVHCS*LPGSQH
Trigger: ATGCTGTGAACCAGGAAGCCATGAACAATGCACAGA...AATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CCA 90 bp AGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGTCTGTGCATTGTTCATaGCTTCCTGGTTCACAGCAT +
Preference number: 4 (lower is better)
Translates to: SRLPNRLPWSHDLKVLRKSVHCS*LPGSQH
Trigger: ATGCTGTGAACCAGGAAGCCATGAACAATGCACAGA...CTTTCTAAGGACCTTCAAGTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp TCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGTCTGTGCATTGTTCATaGCTTCCTGGTTCACAGCAT +
Preference number: 4 (lower is better)
Translates to: SSREHLSNRRTIKKLTNESVHCS*LPGSQH
Trigger: ATGCTGTGAACCAGGAAGCCATGAACAATGCACAGA...CTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp CTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGGAATGTGGCTTCTTACCCAATAGGCTTCCCTaGAGTCATGACTTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: LSNRRTIKKLTNEECGFLPNRLP*SHDLKV
Trigger: GACCTTCAAGTCATGACTCCAGGGAAGCCTATTGGG...TAAGAAGCCACATTCCTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp TATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTGCAGGTGAGTTGATTTaGGGGTCCAGTTCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: YQDLLEGFPSCFQAGELIAGELI*GSSSSN
Trigger: ATTTGAAGAACTGGACCCCCAAATCAACTCACCTGC...AATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CCA 90 bp AGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATGAGGTCTTCGCAGGTGAGTTGATTTaGGGGTCCAGTTCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: SRESFYLEQHFTYCNEVFAGELI*GSSSSN
Trigger: ATTTGAAGAACTGGACCCCCAAATCAACTCACCTGC...GAAGACCTCATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp GTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGAAACCCTCATAGTACTGGTTaGAATTCAGAATTTCCCACT +
Preference number: 4 (lower is better)
Translates to: VWQVLLGSTSPTDEQSRNPHSTG*NSEFPT
Trigger: AGTGGGAAATTCTGAATTTCAACCAGTACTATGAGG...GTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp CTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTCTGCCAAGTTCCATaGAATCATCCCAAGAGTACA +
Preference number: 4 (lower is better)
Translates to: LYYQDLLEGFPSCFQAGEFCQVP*NHPKST
Trigger: TGTACTCTTGGGATGATTTCATGGAACTTGGCAGAA...CTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR TCA 90 bp AGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATGAGGTCTTCTTCTGCCAAGTTCCATaGAATCATCCCAAGAGTACA +
Preference number: 4 (lower is better)
Translates to: SRESFYLEQHFTYCNEVFFCQVP*NHPKST
Trigger: TGTACTCTTGGGATGATTTCATGGAACTTGGCAGAA...GAAGACCTCATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp ATCCCAAGAGTACAAGTTGTTGTTCTTCTTCATTGGCAGTCTGTACTGGATGATTCCCTGAAGTGTAGATaGGCACTGCGCATTGATTCG +
Preference number: 4 (lower is better)
Translates to: IPRVQVVVLLHWQSVLDDSLKCR*ALRIDS
Trigger: CGAATCAATGCGCAGTGCTCATCTACACTTCAGGGA...ATCATCCAGTACAGACTGCCAATGAAGAAGAACAACAACTTGTACTCTTGGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR TCA 90 bp TTTCTTGTAAATCAGGCAGTTTTTAGTAGACTTCCCAATAGGCTTCCCTGGAGTTCCCTGAAGTGTAGATaGGCACTGCGCATTGATTCG +
Preference number: 4 (lower is better)
Translates to: FLVNQAVFSRLPNRLPWSSLKCR*ALRIDS
Trigger: CGAATCAATGCGCAGTGCTCATCTACACTTCAGGGA...ACTCCAGGGAAGCCTATTGGGAAGTCTACTAAAAACTGCCTGATTTACAAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp CTTAAAAACAGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATTTACCAAGGTGCCCTTaGGAGCATCTGCTTGAGCAA +
Preference number: 4 (lower is better)
Translates to: LKNSRESFYLEQHFTYCNLPRCP*EHLLEQ
Trigger: TTGCTCAAGCAGATGCTCTCAAGGGCACCTTGGTAA...ATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCTGTTTTTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp GAAATCATCCCAAGAGTACAAGTTGTTGTTCTTCTTCATTGGCAGTCTGTACTGGGTTCTCCGCTCATCTaGTTCATCTCACACTTCAGC +
Preference number: 4 (lower is better)
Translates to: EIIPRVQVVVLLHWQSVLGSPLI*FISHFS
Trigger: GCTGAAGTGTGAGATGAATCAGATGAGCGGAGAACC...CAGTACAGACTGCCAATGAAGAAGAACAACAACTTGTACTCTTGGGATGATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681479.1
CDS-3UTR TCA 90 bp GATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGTCCTTCTCCAAGATaGCCCACTTTTCAATCCTCT +
Preference number: 4 (lower is better)
Translates to: DFIALKRMAGSSREHLSNSPSPR*PTFQSS
Trigger: AGAGGATTGAAAAGTGGGTCATCTTGGAGAAGGACT...GTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp GCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACAGTGATTTTATTGCTTTaGAACGTATGGCAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: ALKRMAGSSREHLSNRRTVILLL*NVWQVL
Trigger: AAGAACCTGCCATACGTTTCAAAGCAATAAAATCAC...TGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp ATATACAGTGATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACTCCAGGCAGGTGAGTTaGTTTGGGGGTCCAGTTCTT +
Preference number: 4 (lower is better)
Translates to: IYSDFIALKRMAGSSREHSRQVS*FGGPVL
Trigger: AAGAACTGGACCCCCAAATCAACTCACCTGCCTGGA...GTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATCACTGTATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp AAGATATACAGTGATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGTTGCTTCCAGGCAGGTaGGTTGATTTGGGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: KIYSDFIALKRMAGSSRELLPGR*VDLGVQ
Trigger: CTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAA...CTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATCACTGTATATCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp TTGTTCATTTCTTATCTGTTCCCAAGGTCCAGATTGAGTCTGTCTTGTTTGCTGTCCCAAGGTCCAGATTaGGTCTGTCTTGTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: LFISYLFPRSRLSLSCLLSQGPD*VCLVCC
Trigger: GCAGCAAACAAGACAGACTCAATCTGGACCTTGGGA...CAGCAAACAAGACAGACTCAATCTGGACCTTGGGAACAGATAAGAAATGAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587227.1
CDS-3UTR GCA 90 bp TCCCAAGAGTACAAGTTGTTGTTCTTCTTCATTGGCAGTCTGTACTGGATGATCTTTGCCATTCTTGGATaGGAGGGCTGGATAAGTTCC +
Preference number: 4 (lower is better)
Translates to: SQEYKLLFFFIGSLYWMIFAILG*EGWISS
Trigger: GGAACTTATCCAGCCCTCGCATCCAAGAATGGCAAA...GATCATCCAGTACAGACTGCCAATGAAGAAGAACAACAACTTGTACTCTTGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR GCA 90 bp CTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGAGTGATAAACCACTCTaGAGAGTTAAACCCCAGGAT +
Preference number: 4 (lower is better)
Translates to: LYYQDLLEGFPSCFQAGESDKPL*RVKPQD
Trigger: ATCCTGGGGTTTAACTCTGCAGAGTGGTTTATCACT...CTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR GCA 90 bp TTGTTCATTTCTTATCTGTTCCCAAGGTCCAGATTGAGTCTGTCTTGTTTGCTGTTAGGGGCTCTAGGCTaGTCTGTGGAATCGAAAGGA +
Preference number: 4 (lower is better)
Translates to: LFISYLFPRSRLSLSCLLLGALG*SVESKG
Trigger: TCCTTTCGATTCCACAGAGCAGCCTAGAGCCCCTAA...CAGCAAACAAGACAGACTCAATCTGGACCTTGGGAACAGATAAGAAATGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587227.1
CDS-3UTR GCA 90 bp TGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTATTGCTTTGTGGCTCTCGATGACCTaGTCCAGTTGGGTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: WSHDLKVLRKIYSDFIALWLSMT*SSWVSG
Trigger: CCCTGACACCCAACTGGAGCAGGTCATCGAGAGCCA...CAAAGCAATAAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR GCA 90 bp GATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACGAAGCCAATGTTTCTTaGCCACACGAATGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: DFIALKRMAGSSREHLSNEANVS*PHECLL
Trigger: AAGAAGGCATTCGTGTGGGCAAGAAACATTGGCTTC...GTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR GCA 90 bp CCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTATTGCTACCAGGGGGTCTTGCTaGTTCACAATCTCAGTCACG +
Preference number: 4 (lower is better)
Translates to: PWSHDLKVLRKIYSDFIATRGSC*FTISVT
Trigger: CGTGACTGAGATTGTGAAGCAGCAAGACCCCCTGGT...AGCAATAAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR GCA 90 bp AGTGCTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGCTTTTCAATCCTCTGTaGATTGTTCATGGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: SALLSGLIGRVSQLLPGRLFNPL*IVHGFL
Trigger: CAGGAAGCCATGAACAATGCACAGAGGATTGAAAAG...CCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS-3UTR GCA 90 bp ATATACAGTGATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACGAAGGGTTTCCCAGTTaGTTCCAGGCAGGTGAGTTG +
Preference number: 4 (lower is better)
Translates to: IYSDFIALKRMAGSSREHEGFPS*FQAGEL
Trigger: CAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTC...GTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATCACTGTATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS-3UTR GCA 90 bp AAGATATACAGTGATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGGGTGTGCAGAAACCATaGTCCACAGCACTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: KIYSDFIALKRMAGSSREGVQKP*STALEL
Trigger: CAGCTCCAGTGCTGTGGAGCATGGTTTCTGCACACC...CTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATCACTGTATATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591403.5
CDS-3UTR CCA 90 bp CTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGGAATGTGGCTTCTTATGGAGCTGGGACATCTaGTCACTCAGGTGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: LSNRRTIKKLTNEECGFLWSWDI*SLRCFL
Trigger: AAGAAAACACCTGAGTGACCAGATGTCCCAGCTCCA...TAAGAAGCCACATTCCTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp AAGATATACAGTGATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGATCTGGCAAGGCACCTaGAGCTGGGACATCTGGTCA +
Preference number: 4 (lower is better)
Translates to: KIYSDFIALKRMAGSSREIWQGT*SWDIWS
Trigger: TGACCAGATGTCCCAGCTCCAGGTGCCTTGCCAGAT...CTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATCACTGTATATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp ATCATCCCAAGAGTACAAGTTGTTGTTCTTCTTCATTGGCAGTCTGTACTGGATACTCTTCAAGAGGTGTaGTTCTGGCCATCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: IIPRVQVVVLLHWQSVLDTLQEV*FWPSGK
Trigger: CTTGCCAGATGGCCAGAACCACACCTCTTGAAGAGT...ATCCAGTACAGACTGCCAATGAAGAAGAACAACAACTTGTACTCTTGGGATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592677.5
ENST00000681479.1
CDS-3UTR CCA 90 bp CTTAAAAACAGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATCTCCATCTCGACAGGTaGTCCACAGCCTTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: LKNSRESFYLEQHFTYCNLHLDR*STAFCF
Trigger: AAAACAGAAGGCTGTGGACCACCTGTCGAGATGGAG...ATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCTGTTTTTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588304.5
CDS-3UTR CCA 90 bp ATATACAGTGATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACGGCCTGGTCCGTGTTTaGATAGCCTCAGAAGGACTT +
Preference number: 4 (lower is better)
Translates to: IYSDFIALKRMAGSSREHGLVRV*IASEGL
Trigger: AAGTCCTTCTGAGGCTATCCAAACACGGACCAGGCC...GTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATCACTGTATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp TCCCAAGAGTACAAGTTGTTGTTCTTCTTCATTGGCAGTCTGTACTGGATGATCCTTGGATGCGAGGGCTaGATAAGTTCCAAATCGGTT +
Preference number: 4 (lower is better)
Translates to: SQEYKLLFFFIGSLYWMILGCEG*ISSKSV
Trigger: AACCGATTTGGAACTTATCCAGCCCTCGCATCCAAG...GATCATCCAGTACAGACTGCCAATGAAGAAGAACAACAACTTGTACTCTTGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR CCA 90 bp GAAGTGCTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCACCTCGGCAGAGTTGGTaGCATAAATACCAACACAAA +
Preference number: 4 (lower is better)
Translates to: EVLYYQDLLEGFPSCFQAPRQSW*HKYQHK
Trigger: TTTGTGTTGGTATTTATGCCACCAACTCTGCCGAGG...TGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAGCACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
CDS-3UTR CCA 90 bp TGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTATTGCTTTGAACTCGGCAGTCTCTTaGTTGAGGGGCGCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: WSHDLKVLRKIYSDFIALNSAVS*LRGAVP
Trigger: TGGGACTGCGCCCCTCAACCAAGAGACTGCCGAGTT...CAAAGCAATAAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp TCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGCCATCCTTGTTCTGCTaGAACAGCATATTCTTACAC +
Preference number: 4 (lower is better)
Translates to: SSREHLSNRRTIKKLTNEPSLFC*NSIFLH
Trigger: GTGTAAGAATATGCTGTTCCAGCAGAACAAGGATGG...CTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp TTTCTTGTAAATCAGGCAGTTTTTAGTAGACTTCCCAATAGGCTTCCCTGGAGTAGGTCTCAACAGGAATaGGGGGCACATTTTCACCAC +
Preference number: 4 (lower is better)
Translates to: FLVNQAVFSRLPNRLPWSRSQQE*GAHFHH
Trigger: GTGGTGAAAATGTGCCCCCCATTCCTGTTGAGACCT...ACTCCAGGGAAGCCTATTGGGAAGTCTACTAAAAACTGCCTGATTTACAAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp CTTAAAAACAGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATCCCAATAGGCTTCCCTaGAGTCATGACTTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: LKNSRESFYLEQHFTYCNPNRLP*SHDLKV
Trigger: GACCTTCAAGTCATGACTCCAGGGAAGCCTATTGGG...ATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCTGTTTTTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp AAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGATTATCAGGACTTATTaGAAGGGTTTCCCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: KRMAGSSREHLSNRRTIKIIRTY*KGFPVA
Trigger: AGCAACTGGGAAACCCTTCCAATAAGTCCTGATAAT...CTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
3UTR CAA 72 bp CATTTGTTCATTTCTTATCTGTTCCCAAGGTCCAGATaGAGTCTGTCTTGTTTGCTGCTGTTTCCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: HLFISYLFPRSR*SLSCLLLFPLL
Trigger: GAGCAGGGGAAACAGCAGCAAACAAGACAGACTCAATCTGGACCTTGGGAACAGATAAGAAATGAACAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587227.1
CDS-3UTR TCA 90 bp CTTCTCCAAGATGACCCACTTTTCAATCCTCTGTGCATTGTTCATGGCTTCCTGCCTCATAGTACTGGTTaGAATTCAGAATTTCCCACT +
Preference number: 4 (lower is better)
Translates to: LLQDDPLFNPLCIVHGFLPHSTG*NSEFPT
Trigger: AGTGGGAAATTCTGAATTTCAACCAGTACTATGAGG...CAGGAAGCCATGAACAATGCACAGAGGATTGAAAAGTGGGTCATCTTGGAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681479.1
CDS-3UTR TCA 90 bp GAGCACCTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGGAATGTGGCATTTTCTGTAACTGTTaGTCATTCTCAACCAGCAAG +
Preference number: 4 (lower is better)
Translates to: EHLSNRRTIKKLTNEECGIFCNC*SFSTSK
Trigger: CTTGCTGGTTGAGAATGATCAACAGTTACAGAAAAT...GCCACATTCCTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681525.1
CDS-3UTR TCA 90 bp TTTCATTTGTTCATTTCTTATCTGTTCCCAAGGTCCAGATTGAGTCTGTCTTGTTATGCCTGTGGTCCCTaGAGTGTAGATGAGCACTGC +
Preference number: 4 (lower is better)
Translates to: FHLFISYLFPRSRLSLSCYACGP*SVDEHC
Trigger: GCAGTGCTCATCTACACTTCAGGGACCACAGGCATA...ACAAGACAGACTCAATCTGGACCTTGGGAACAGATAAGAAATGAACAAATGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587227.1
CDS-3UTR TCA 90 bp ATATACAGTGATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACCACGTGATGTTGTCATaGCTGAGCATCACTCCCTTG +
Preference number: 4 (lower is better)
Translates to: IYSDFIALKRMAGSSREHHVMLS*LSITPL
Trigger: CAAGGGAGTGATGCTCAGTCATGACAACATCACGTG...GTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATCACTGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp ATATACAGTGATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACTTACCAAGGTGCCCTTaGGAGCATCTGCTTGAGCAA +
Preference number: 4 (lower is better)
Translates to: IYSDFIALKRMAGSSREHLPRCP*EHLLEQ
Trigger: TTGCTCAAGCAGATGCTCTCAAGGGCACCTTGGTAA...GTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATCACTGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp CTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGCAAGAAACTGACCAATaGGGAATGTGGCTTCTTAAA +
Preference number: 4 (lower is better)
Translates to: LYYQDLLEGFPSCFQAGEQETDQ*GMWLLK
Trigger: TTTAAGAAGCCACATTCCTCATTGGTCAGTTTCTTG...CTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS-3UTR TCA 90 bp TATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTCAAGAAACTGACCAATaGGGAATGTGGCTTCTTAAA +
Preference number: 4 (lower is better)
Translates to: YQDLLEGFPSCFQAGELIQETDQ*GMWLLK
Trigger: TTTAAGAAGCCACATTCCTCATTGGTCAGTTTCTTG...AATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS-3UTR TCA 90 bp GCGTCAGCAACATGCTCAGAAACTTCAGTTTATCTCCTACTAACATGGCGTTACGAACAATCAAGAAACTaGCCAATGAGGAATGTGGCT +
Preference number: 4 (lower is better)
Translates to: ASATCSETSVYLLLTWRYEQSRN*PMRNVA
Trigger: AGCCACATTCCTCATTGGTCAGTTTCTTGATTGTTC...GTAACGCCATGTTAGTAGGAGATAAACTGAAGTTTCTGAGCATGTTGCTGACGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681479.1
CDS-3UTR TCA 90 bp GTAAATCAGGCAGTTTTTAGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACGAACAATCAAGAAACTaGCCAATGAGGAATGTGGCT +
Preference number: 4 (lower is better)
Translates to: VNQAVFSRLPNRLPWSHDEQSRN*PMRNVA
Trigger: AGCCACATTCCTCATTGGTCAGTTTCTTGATTGTTC...GTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACTAAAAACTGCCTGATTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp GTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGAAACGTGATTTTATTGCTTTaGAACGTATGGCAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: VWQVLLGSTSPTDEQSRNVILLL*NVWQVL
Trigger: AAGAACCTGCCATACGTTTCAAAGCAATAAAATCAC...GTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp TCCAGTTGGGTGTCAGGGATACTTCTGCCAAGTTCCATGAAATCATCCCAAGAGGTGATTTTATTGCTTTaGAACGTATGGCAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: SSWVSGILLPSSMKSSQEVILLL*NVWQVL
Trigger: AAGAACCTGCCATACGTTTCAAAGCAATAAAATCAC...CTCTTGGGATGATTTCATGGAACTTGGCAGAAGTATCCCTGACACCCAACTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681479.1
CDS-3UTR TCA 90 bp GATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACCCTGGAGTCATGACTTaGAGGTCCTTAGAAAGATAT +
Preference number: 4 (lower is better)
Translates to: DFIALKRMAGSSREHLSNPGVMT*RSLERY
Trigger: ATATCTTTCTAAGGACCTTCAAGTCATGACTCCAGG...GTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp AAGATATACAGTGATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGTCCAGGCAGGTGAGTTaGTTTGGGGGTCCAGTTCTT +
Preference number: 4 (lower is better)
Translates to: KIYSDFIALKRMAGSSRESRQVS*FGGPVL
Trigger: AAGAACTGGACCCCCAAATCAACTCACCTGCCTGGA...CTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATCACTGTATATCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR GCA 90 bp TCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGGTGTTTTCTTCTTCCTaGAAAGACAGTCAACAGGTA +
Preference number: 4 (lower is better)
Translates to: SSREHLSNRRTIKKLTNEVFSSS*KDSQQV
Trigger: TACCTGTTGACTGTCTTTGCAGGAAGAAGAAAACAC...CTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681525.1
CDS-3UTR GCA 90 bp CTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGGTGTTTTCTTCTTCCTaGAAAGACAGTCAACAGGTA +
Preference number: 4 (lower is better)
Translates to: LYYQDLLEGFPSCFQAGEVFSSS*KDSQQV
Trigger: TACCTGTTGACTGTCTTTGCAGGAAGAAGAAAACAC...CTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
CDS-3UTR GCA 90 bp AGGCTTCCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTTTTGCCATTCTTGGATaGGAGGGCTGGATAAGTTCC +
Preference number: 4 (lower is better)
Translates to: RLPWSHDLKVLRKIYSDFFAILG*EGWISS
Trigger: GGAACTTATCCAGCCCTCGCATCCAAGAATGGCAAA...AAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCAGGGAAGCCT
43% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR GCA 90 bp TTTCTTGTAAATCAGGCAGTTTTTAGTAGACTTCCCAATAGGCTTCCCTGGAGTCTTGATCAAGGATTTTaGAGCCTTCCGACAAGCCTC +
Preference number: 4 (lower is better)
Translates to: FLVNQAVFSRLPNRLPWSLDQGF*SLPTSL
Trigger: GAGGCTTGTCGGAAGGCTGCAAAATCCTTGATCAAG...ACTCCAGGGAAGCCTATTGGGAAGTCTACTAAAAACTGCCTGATTTACAAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR GCA 90 bp ATCATCCCAAGAGTACAAGTTGTTGTTCTTCTTCATTGGCAGTCTGTACTGGATCTTGATCAAGGATTTTaGAGCCTTCCGACAAGCCTC +
Preference number: 4 (lower is better)
Translates to: IIPRVQVVVLLHWQSVLDLDQGF*SLPTSL
Trigger: GAGGCTTGTCGGAAGGCTGCAAAATCCTTGATCAAG...ATCCAGTACAGACTGCCAATGAAGAAGAACAACAACTTGTACTCTTGGGATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR GCA 90 bp ATATACAGTGATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACTTAGGGGCTCTAGGCTaGTCTGTGGAATCGAAAGGA +
Preference number: 4 (lower is better)
Translates to: IYSDFIALKRMAGSSREHLGALG*SVESKG
Trigger: TCCTTTCGATTCCACAGAGCAGCCTAGAGCCCCTAA...GTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATCACTGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681525.1
CDS-3UTR GCA 90 bp AGGCTTCCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTAGTGTAGATGAGCACTaGGCATTGATTCGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: RLPWSHDLKVLRKIYSDFSVDEH*ALIRLL
Trigger: CAGAAGGCGAATCAATGCGCAGTGCTCATCTACACT...AAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCAGGGAAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR GCA 90 bp TTGTTCATTTCTTATCTGTTCCCAAGGTCCAGATTGAGTCTGTCTTGTTTGCTGAGTGTAGATGAGCACTaGGCATTGATTCGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: LFISYLFPRSRLSLSCLLSVDEH*ALIRLL
Trigger: CAGAAGGCGAATCAATGCGCAGTGCTCATCTACACT...CAGCAAACAAGACAGACTCAATCTGGACCTTGGGAACAGATAAGAAATGAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587227.1
CDS-3UTR GCA 90 bp TTTCTTGTAAATCAGGCAGTTTTTAGTAGACTTCCCAATAGGCTTCCCTGGAGTAGTGTAGATGAGCACTaGGCATTGATTCGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: FLVNQAVFSRLPNRLPWSSVDEH*ALIRLL
Trigger: CAGAAGGCGAATCAATGCGCAGTGCTCATCTACACT...ACTCCAGGGAAGCCTATTGGGAAGTCTACTAAAAACTGCCTGATTTACAAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR GCA 90 bp GAGTACAAGTTGTTGTTCTTCTTCATTGGCAGTCTGTACTGGATGATCGCTTTTAGTGTAGATGAGCACTaGGCATTGATTCGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: EYKLLFFFIGSLYWMIAFSVDEH*ALIRLL
Trigger: CAGAAGGCGAATCAATGCGCAGTGCTCATCTACACT...AAAAGCGATCATCCAGTACAGACTGCCAATGAAGAAGAACAACAACTTGTACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR GCA 90 bp AAGATATACAGTGATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGTCACTCCCTTGGGTATaGCTGTGGTCCCTGAAGTGT +
Preference number: 4 (lower is better)
Translates to: KIYSDFIALKRMAGSSRESLPWV*LWSLKC
Trigger: ACACTTCAGGGACCACAGGCATACCCAAGGGAGTGA...CTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATCACTGTATATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR GCA 90 bp TTTCTTGTAAATCAGGCAGTTTTTAGTAGACTTCCCAATAGGCTTCCCTGGAGTTCTTGCCCACACGAATaGCTTCTTCTTCAAGCCCAT +
Preference number: 4 (lower is better)
Translates to: FLVNQAVFSRLPNRLPWSSCPHE*LLLQAH
Trigger: ATGGGCTTGAAGAAGAAGGCATTCGTGTGGGCAAGA...ACTCCAGGGAAGCCTATTGGGAAGTCTACTAAAAACTGCCTGATTTACAAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR GCA 90 bp AGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGTCAGCGTCAGCAACATaGTCAGAAACTTCAGTTTAT +
Preference number: 4 (lower is better)
Translates to: SRLPNRLPWSHDLKVLRKSASAT*SETSVY
Trigger: ATAAACTGAAGTTTCTGAGCATGTTGCTGACGCTGA...CTTTCTAAGGACCTTCAAGTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp AAGATATACAGTGATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGACAGGTAGCCCCTCCTaGAAACCTGAACATGAGCTG +
Preference number: 4 (lower is better)
Translates to: KIYSDFIALKRMAGSSRETGSPS*KPEHEL
Trigger: CAGCTCATGTTCAGGTTTCCAGGAGGGGCTACCTGT...CTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATCACTGTATATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681525.1
CDS-3UTR CCA 90 bp ATATACAGTGATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACACTCTTCAAGAGGTGTaGTTCTGGCCATCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: IYSDFIALKRMAGSSREHTLQEV*FWPSGK
Trigger: CTTGCCAGATGGCCAGAACCACACCTCTTGAAGAGT...GTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATCACTGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp AACAGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATGAGGTCGTTGTTCTTCTTCATTaGCAGTCTGTACTGGATGAT +
Preference number: 4 (lower is better)
Translates to: NSRESFYLEQHFTYCNEVVVLLH*QSVLDD
Trigger: ATCATCCAGTACAGACTGCCAATGAAGAAGAACAAC...GACCTCATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp TCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGGTTGTTCTTCTTCATTaGCAGTCTGTACTGGATGAT +
Preference number: 4 (lower is better)
Translates to: SSREHLSNRRTIKKLTNEVVLLH*QSVLDD
Trigger: ATCATCCAGTACAGACTGCCAATGAAGAAGAACAAC...CTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp CAAGATGACCCACTTTTCAATCCTCTGTGCATTGTTCATGGCTTCCTGGTTCACGTTGTTCTTCTTCATTaGCAGTCTGTACTGGATGAT +
Preference number: 4 (lower is better)
Translates to: QDDPLFNPLCIVHGFLVHVVLLH*QSVLDD
Trigger: ATCATCCAGTACAGACTGCCAATGAAGAAGAACAAC...GTGAACCAGGAAGCCATGAACAATGCACAGAGGATTGAAAAGTGGGTCATCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681479.1
CDS-3UTR CCA 90 bp CTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGGAATGTGGCTTCTTAGCAGGTGAGTTGATTTaGGGGTCCAGTTCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: LSNRRTIKKLTNEECGFLAGELI*GSSSSN
Trigger: ATTTGAAGAACTGGACCCCCAAATCAACTCACCTGC...TAAGAAGCCACATTCCTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp AGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATGAGGTCTTCATTATCAGGACTTATTaGAAGGGTTTCCCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: SRESFYLEQHFTYCNEVFIIRTY*KGFPVA
Trigger: AGCAACTGGGAAACCCTTCCAATAAGTCCTGATAAT...GAAGACCTCATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CCA 90 bp AGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGATTATCAGGACTTATTaGAAGGGTTTCCCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: SRLPNRLPWSHDLKVLRKIIRTY*KGFPVA
Trigger: AGCAACTGGGAAACCCTTCCAATAAGTCCTGATAAT...CTTTCTAAGGACCTTCAAGTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CCA 90 bp TTCATTTCTTATCTGTTCCCAAGGTCCAGATTGAGTCTGTCTTGTTTGCTGCTGTGTTTCCCCTGCTCCTaGAATATTCCCCAGTACATA +
Preference number: 4 (lower is better)
Translates to: FISYLFPRSRLSLSCLLLCFPCS*NIPQYI
Trigger: TATGTACTGGGGAATATTCCAGGAGCAGGGGAAACA...CAGCAGCAAACAAGACAGACTCAATCTGGACCTTGGGAACAGATAAGAAATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587227.1
CDS-3UTR TCA 90 bp CCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTATTGCTTCTTTAGCTCCTTCTTaGGTCTTTGGGGTTCCAGTC +
Preference number: 4 (lower is better)
Translates to: PWSHDLKVLRKIYSDFIASLAPS*VFGVPV
Trigger: GACTGGAACCCCAAAGACTCAAGAAGGAGCTAAAGA...AGCAATAAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp AAGTTGTTGTTCTTCTTCATTGGCAGTCTGTACTGGATGATCGCTTTTAGGGGCCCTCATAGTACTGGTTaGAATTCAGAATTTCCCACT +
Preference number: 4 (lower is better)
Translates to: KLLFFFIGSLYWMIAFRGPHSTG*NSEFPT
Trigger: AGTGGGAAATTCTGAATTTCAACCAGTACTATGAGG...GCCCCTAAAAGCGATCATCCAGTACAGACTGCCAATGAAGAAGAACAACAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR TCA 90 bp GAAGTGCTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCACCTCATAGTACTGGTTaGAATTCAGAATTTCCCACT +
Preference number: 4 (lower is better)
Translates to: EVLYYQDLLEGFPSCFQAPHSTG*NSEFPT
Trigger: AGTGGGAAATTCTGAATTTCAACCAGTACTATGAGG...TGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAGCACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR TCA 90 bp GTAAATCAGGCAGTTTTTAGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACCCTCATAGTACTGGTTaGAATTCAGAATTTCCCACT +
Preference number: 4 (lower is better)
Translates to: VNQAVFSRLPNRLPWSHDPHSTG*NSEFPT
Trigger: AGTGGGAAATTCTGAATTTCAACCAGTACTATGAGG...GTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACTAAAAACTGCCTGATTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp AAGATATACAGTGATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGGCTCCAAACCCAGCTTaGTCAAGGATTTTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: KIYSDFIALKRMAGSSREAPNPA*SRILQP
Trigger: AGGCTGCAAAATCCTTGATCAAGCTGGGTTTGGAGC...CTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATCACTGTATATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp AGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGATTTTCTGTAACTGTTaGTCATTCTCAACCAGCAAG +
Preference number: 4 (lower is better)
Translates to: SRLPNRLPWSHDLKVLRKIFCNC*SFSTSK
Trigger: CTTGCTGGTTGAGAATGATCAACAGTTACAGAAAAT...CTTTCTAAGGACCTTCAAGTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681525.1
CDS-3UTR TCA 90 bp TATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTATTTTCTGTAACTGTTaGTCATTCTCAACCAGCAAG +
Preference number: 4 (lower is better)
Translates to: YQDLLEGFPSCFQAGELIIFCNC*SFSTSK
Trigger: CTTGCTGGTTGAGAATGATCAACAGTTACAGAAAAT...AATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
CDS-3UTR TCA 90 bp CTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGATTTTCTGTAACTGTTaGTCATTCTCAACCAGCAAG +
Preference number: 4 (lower is better)
Translates to: LYYQDLLEGFPSCFQAGEIFCNC*SFSTSK
Trigger: CTTGCTGGTTGAGAATGATCAACAGTTACAGAAAAT...CTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
CDS-3UTR TCA 90 bp TTCATTTCTTATCTGTTCCCAAGGTCCAGATTGAGTCTGTCTTGTTTGCTGCTGTTCTGCCAAGTTCCATaGAATCATCCCAAGAGTACA +
Preference number: 4 (lower is better)
Translates to: FISYLFPRSRLSLSCLLLFCQVP*NHPKST
Trigger: TGTACTCTTGGGATGATTTCATGGAACTTGGCAGAA...CAGCAGCAAACAAGACAGACTCAATCTGGACCTTGGGAACAGATAAGAAATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587227.1
CDS-3UTR TCA 90 bp CACACTTCAGCGTCAGCAACATGCTCAGAAACTTCAGTTTATCTCCTACTAACATTCTGCCAAGTTCCATaGAATCATCCCAAGAGTACA +
Preference number: 4 (lower is better)
Translates to: HTSASATCSETSVYLLLTFCQVP*NHPKST
Trigger: TGTACTCTTGGGATGATTTCATGGAACTTGGCAGAA...TGTTAGTAGGAGATAAACTGAAGTTTCTGAGCATGTTGCTGACGCTGAAGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681479.1
CDS-3UTR TCA 90 bp TGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTATTGCTTTGTATGCCTGTGGTCCCTaGAGTGTAGATGAGCACTGC +
Preference number: 4 (lower is better)
Translates to: WSHDLKVLRKIYSDFIALYACGP*SVDEHC
Trigger: GCAGTGCTCATCTACACTTCAGGGACCACAGGCATA...CAAAGCAATAAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp CTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGGAATGTGGCTTCTTAATCTTCTCCCAAATTTaGGGCACTCCAATGAAGACA +
Preference number: 4 (lower is better)
Translates to: LSNRRTIKKLTNEECGFLIFSQI*GTPMKT
Trigger: TGTCTTCATTGGAGTGCCTCAAATTTGGGAGAAGAT...TAAGAAGCCACATTCCTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp CTTAAAAACAGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATAGTCCTTCTCCAAGATaGCCCACTTTTCAATCCTCT +
Preference number: 4 (lower is better)
Translates to: LKNSRESFYLEQHFTYCNSPSPR*PTFQSS
Trigger: AGAGGATTGAAAAGTGGGTCATCTTGGAGAAGGACT...ATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCTGTTTTTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp TTTCTTGTAAATCAGGCAGTTTTTAGTAGACTTCCCAATAGGCTTCCCTGGAGTTTTCACTTATTGCAATaGGGTCTTCCTGCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: FLVNQAVFSRLPNRLPWSFHLLQ*GLPAEG
Trigger: GCCTTCAGCAGGAAGACCTCATTGCAATAAGTGAAA...ACTCCAGGGAAGCCTATTGGGAAGTCTACTAAAAACTGCCTGATTTACAAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp CTTAAAAACAGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATTTTCACTTATTGCAATaGGGTCTTCCTGCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: LKNSRESFYLEQHFTYCNFHLLQ*GLPAEG
Trigger: GCCTTCAGCAGGAAGACCTCATTGCAATAAGTGAAA...ATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCTGTTTTTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp AGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGGTGATTTTATTGCTTTaGAACGTATGGCAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: SRLPNRLPWSHDLKVLRKVILLL*NVWQVL
Trigger: AAGAACCTGCCATACGTTTCAAAGCAATAAAATCAC...CTTTCTAAGGACCTTCAAGTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp CTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGGAATGTGGCTTCTTACCTGGAGTCATGACTTaGAGGTCCTTAGAAAGATAT +
Preference number: 4 (lower is better)
Translates to: LSNRRTIKKLTNEECGFLPGVMT*RSLERY
Trigger: ATATCTTTCTAAGGACCTTCAAGTCATGACTCCAGG...TAAGAAGCCACATTCCTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp TTGTTCATTTCTTATCTGTTCCCAAGGTCCAGATTGAGTCTGTCTTGTTTGCTGTTTTGTTGTCATGACTaGGCATCACTCCCTTGGGTA +
Preference number: 4 (lower is better)
Translates to: LFISYLFPRSRLSLSCLLFCCHD*ASLPWV
Trigger: TACCCAAGGGAGTGATGCTCAGTCATGACAACAAAA...CAGCAAACAAGACAGACTCAATCTGGACCTTGGGAACAGATAAGAAATGAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587227.1
CDS-3UTR TCA 90 bp TTCATTTCTTATCTGTTCCCAAGGTCCAGATTGAGTCTGTCTTGTTTGCTGCTGGAATTTTTGTTGTCATaGCTGAGCATCACTCCCTTG +
Preference number: 4 (lower is better)
Translates to: FISYLFPRSRLSLSCLLLEFLLS*LSITPL
Trigger: CAAGGGAGTGATGCTCAGTCATGACAACAAAAATTC...CAGCAGCAAACAAGACAGACTCAATCTGGACCTTGGGAACAGATAAGAAATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587227.1
CDS-3UTR GCA 90 bp TTGGGTGTCAGGGATACTTCTGCCAAGTTCCATGAAATCATCCCAAGAGTACAAGTGTTTTCTTCTTCCTaGAAAGACAGTCAACAGGTA +
Preference number: 4 (lower is better)
Translates to: LGVRDTSAKFHEIIPRVQVFSSS*KDSQQV
Trigger: TACCTGTTGACTGTCTTTGCAGGAAGAAGAAAACAC...TTGTACTCTTGGGATGATTTCATGGAACTTGGCAGAAGTATCCCTGACACCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587617.1
ENST00000592677.5
CDS-3UTR GCA 90 bp ATATACAGTGATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACTTTGCCATTCTTGGATaGGAGGGCTGGATAAGTTCC +
Preference number: 4 (lower is better)
Translates to: IYSDFIALKRMAGSSREHFAILG*EGWISS
Trigger: GGAACTTATCCAGCCCTCGCATCCAAGAATGGCAAA...GTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATCACTGTATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR GCA 90 bp CCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTATTGCTAGTGTAGATGAGCACTaGGCATTGATTCGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: PWSHDLKVLRKIYSDFIASVDEH*ALIRLL
Trigger: CAGAAGGCGAATCAATGCGCAGTGCTCATCTACACT...AGCAATAAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR GCA 90 bp GAAGTGCTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCATCAGCGTCAGCAACATaGTCAGAAACTTCAGTTTAT +
Preference number: 4 (lower is better)
Translates to: EVLYYQDLLEGFPSCFQASASAT*SETSVY
Trigger: ATAAACTGAAGTTTCTGAGCATGTTGCTGACGCTGA...TGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAGCACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS-3UTR GCA 90 bp CTGAAGTGCTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGTCAGCGTCAGCAACATaGTCAGAAACTTCAGTTTAT +
Preference number: 4 (lower is better)
Translates to: LKCFIIRTYWKGFPVASRSASAT*SETSVY
Trigger: ATAAACTGAAGTTTCTGAGCATGTTGCTGACGCTGA...CCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAGCACTTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS-3UTR GCA 90 bp TGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTATTGCTTTGACCAGGGGGTCTTGCTaGTTCACAATCTCAGTCACG +
Preference number: 4 (lower is better)
Translates to: WSHDLKVLRKIYSDFIALTRGSC*FTISVT
Trigger: CGTGACTGAGATTGTGAAGCAGCAAGACCCCCTGGT...CAAAGCAATAAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp ATATACAGTGATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACTGGAGCTGGGACATCTaGTCACTCAGGTGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: IYSDFIALKRMAGSSREHWSWDI*SLRCFL
Trigger: AAGAAAACACCTGAGTGACCAGATGTCCCAGCTCCA...GTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATCACTGTATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp CATGAAATCATCCCAAGAGTACAAGTTGTTGTTCTTCTTCATTGGCAGTCTGTATGGAGCTGGGACATCTaGTCACTCAGGTGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: HEIIPRVQVVVLLHWQSVWSWDI*SLRCFL
Trigger: AAGAAAACACCTGAGTGACCAGATGTCCCAGCTCCA...TACAGACTGCCAATGAAGAAGAACAACAACTTGTACTCTTGGGATGATTTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR CCA 90 bp CTTAAAAACAGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATCCTCGGCAGAGTTGGTaGCATAAATACCAACACAAA +
Preference number: 4 (lower is better)
Translates to: LKNSRESFYLEQHFTYCNPRQSW*HKYQHK
Trigger: TTTGTGTTGGTATTTATGCCACCAACTCTGCCGAGG...ATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCTGTTTTTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681525.1
CDS-3UTR CCA 90 bp AGGCTTCCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTAAACCTCGGCAGAGTTaGTGGCATAAATACCAACAC +
Preference number: 4 (lower is better)
Translates to: RLPWSHDLKVLRKIYSDFKPRQS*WHKYQH
Trigger: GTGTTGGTATTTATGCCACCAACTCTGCCGAGGTTT...AAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCAGGGAAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681525.1
CDS-3UTR CCA 90 bp AAGATATACAGTGATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGATGACCTGCTCCAGTTaGGTGTCAGGGATACTTCTG +
Preference number: 4 (lower is better)
Translates to: KIYSDFIALKRMAGSSREMTCSS*VSGILL
Trigger: CAGAAGTATCCCTGACACCCAACTGGAGCAGGTCAT...CTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATCACTGTATATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp TTTCATTTGTTCATTTCTTATCTGTTCCCAAGGTCCAGATTGAGTCTGTCTTGTATGACCTGCTCCAGTTaGGTGTCAGGGATACTTCTG +
Preference number: 4 (lower is better)
Translates to: FHLFISYLFPRSRLSLSCMTCSS*VSGILL
Trigger: CAGAAGTATCCCTGACACCCAACTGGAGCAGGTCAT...ACAAGACAGACTCAATCTGGACCTTGGGAACAGATAAGAAATGAACAAATGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587227.1
CDS-3UTR CCA 90 bp GATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACATTATCAGGACTTATTaGAAGGGTTTCCCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: DFIALKRMAGSSREHLSNIIRTY*KGFPVA
Trigger: AGCAACTGGGAAACCCTTCCAATAAGTCCTGATAAT...GTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
3UTR CAA 72 bp CCAAGTTCCATGAAATCATCCCAAGAGTACAAGTTGTaGTTCTTCTTCATTGGCAGTCTGTACTGGATGATC +
Preference number: 4 (lower is better)
Translates to: PSSMKSSQEYKL*FFFIGSLYWMI
Trigger: GATCATCCAGTACAGACTGCCAATGAAGAAGAACAACAACTTGTACTCTTGGGATGATTTCATGGAACTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR TCA 90 bp TGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTATTGCTTTGGCTCCAAACCCAGCTTaGTCAAGGATTTTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: WSHDLKVLRKIYSDFIALAPNPA*SRILQP
Trigger: AGGCTGCAAAATCCTTGATCAAGCTGGGTTTGGAGC...CAAAGCAATAAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp GAAATCATCCCAAGAGTACAAGTTGTTGTTCTTCTTCATTGGCAGTCTGTACTGTTCTGCCAAGTTCCATaGAATCATCCCAAGAGTACA +
Preference number: 4 (lower is better)
Translates to: EIIPRVQVVVLLHWQSVLFCQVP*NHPKST
Trigger: TGTACTCTTGGGATGATTTCATGGAACTTGGCAGAA...CAGTACAGACTGCCAATGAAGAAGAACAACAACTTGTACTCTTGGGATGATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR TCA 90 bp TTTCTTGTAAATCAGGCAGTTTTTAGTAGACTTCCCAATAGGCTTCCCTGGAGTTTCTGCCAAGTTCCATaGAATCATCCCAAGAGTACA +
Preference number: 4 (lower is better)
Translates to: FLVNQAVFSRLPNRLPWSFCQVP*NHPKST
Trigger: TGTACTCTTGGGATGATTTCATGGAACTTGGCAGAA...ACTCCAGGGAAGCCTATTGGGAAGTCTACTAAAAACTGCCTGATTTACAAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp TGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTATTGCTTTGTTACCAAGGTGCCCTTaGGAGCATCTGCTTGAGCAA +
Preference number: 4 (lower is better)
Translates to: WSHDLKVLRKIYSDFIALLPRCP*EHLLEQ
Trigger: TTGCTCAAGCAGATGCTCTCAAGGGCACCTTGGTAA...CAAAGCAATAAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp TGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTATTGCTTTGTTTCCAGATAGCCCATaGAGATGTGCCTACCCCAGA +
Preference number: 4 (lower is better)
Translates to: WSHDLKVLRKIYSDFIALFPDSP*RCAYPR
Trigger: TCTGGGGTAGGCACATCTTCATGGGCTATCTGGAAA...CAAAGCAATAAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp TTTCTTGTAAATCAGGCAGTTTTTAGTAGACTTCCCAATAGGCTTCCCTGGAGTGAACAATCAAGAAACTaGCCAATGAGGAATGTGGCT +
Preference number: 4 (lower is better)
Translates to: FLVNQAVFSRLPNRLPWSEQSRN*PMRNVA
Trigger: AGCCACATTCCTCATTGGTCAGTTTCTTGATTGTTC...ACTCCAGGGAAGCCTATTGGGAAGTCTACTAAAAACTGCCTGATTTACAAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp CTTAAAAACAGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATCCTGGAGTCATGACTTaGAGGTCCTTAGAAAGATAT +
Preference number: 4 (lower is better)
Translates to: LKNSRESFYLEQHFTYCNPGVMT*RSLERY
Trigger: ATATCTTTCTAAGGACCTTCAAGTCATGACTCCAGG...ATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCTGTTTTTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR GCA 90 bp CTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGGAATGTGGCTTCTTAGTGTTTTCTTCTTCCTaGAAAGACAGTCAACAGGTA +
Preference number: 4 (lower is better)
Translates to: LSNRRTIKKLTNEECGFLVFSSS*KDSQQV
Trigger: TACCTGTTGACTGTCTTTGCAGGAAGAAGAAAACAC...TAAGAAGCCACATTCCTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681525.1
CDS-3UTR GCA 90 bp AGGCTTCCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTAGTGATAAACCACTCTaGAGAGTTAAACCCCAGGAT +
Preference number: 4 (lower is better)
Translates to: RLPWSHDLKVLRKIYSDFSDKPL*RVKPQD
Trigger: ATCCTGGGGTTTAACTCTGCAGAGTGGTTTATCACT...AAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCAGGGAAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR GCA 90 bp GAAATCATCCCAAGAGTACAAGTTGTTGTTCTTCTTCATTGGCAGTCTGTACTGAGTGATAAACCACTCTaGAGAGTTAAACCCCAGGAT +
Preference number: 4 (lower is better)
Translates to: EIIPRVQVVVLLHWQSVLSDKPL*RVKPQD
Trigger: ATCCTGGGGTTTAACTCTGCAGAGTGGTTTATCACT...CAGTACAGACTGCCAATGAAGAAGAACAACAACTTGTACTCTTGGGATGATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR GCA 90 bp CTTAAAAACAGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATAGTGATAAACCACTCTaGAGAGTTAAACCCCAGGAT +
Preference number: 4 (lower is better)
Translates to: LKNSRESFYLEQHFTYCNSDKPL*RVKPQD
Trigger: ATCCTGGGGTTTAACTCTGCAGAGTGGTTTATCACT...ATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCTGTTTTTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR GCA 90 bp AAGATATACAGTGATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGTCTTGCCCACACGAATaGCTTCTTCTTCAAGCCCAT +
Preference number: 4 (lower is better)
Translates to: KIYSDFIALKRMAGSSRESCPHE*LLLQAH
Trigger: ATGGGCTTGAAGAAGAAGGCATTCGTGTGGGCAAGA...CTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATCACTGTATATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR GCA 90 bp CATGAAATCATCCCAAGAGTACAAGTTGTTGTTCTTCTTCATTGGCAGTCTGTAGAAGCCAATGTTTCTTaGCCACACGAATGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: HEIIPRVQVVVLLHWQSVEANVS*PHECLL
Trigger: AAGAAGGCATTCGTGTGGGCAAGAAACATTGGCTTC...TACAGACTGCCAATGAAGAAGAACAACAACTTGTACTCTTGGGATGATTTCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681479.1
CDS-3UTR GCA 90 bp CTTAAAAACAGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATCTTTTCAATCCTCTGTaGATTGTTCATGGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: LKNSRESFYLEQHFTYCNLFNPL*IVHGFL
Trigger: CAGGAAGCCATGAACAATGCACAGAGGATTGAAAAG...ATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCTGTTTTTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp TGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTATTGCTTTGACTCTTCAAGAGGTGTaGTTCTGGCCATCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: WSHDLKVLRKIYSDFIALTLQEV*FWPSGK
Trigger: CTTGCCAGATGGCCAGAACCACACCTCTTGAAGAGT...CAAAGCAATAAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp AAGATATACAGTGATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCTTGGATGCGAGGGCTaGATAAGTTCCAAATCGGTT +
Preference number: 4 (lower is better)
Translates to: KIYSDFIALKRMAGSSRELGCEG*ISSKSV
Trigger: AACCGATTTGGAACTTATCCAGCCCTCGCATCCAAG...CTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATCACTGTATATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp ATATACAGTGATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACCCTCGGCAGAGTTGGTaGCATAAATACCAACACAAA +
Preference number: 4 (lower is better)
Translates to: IYSDFIALKRMAGSSREHPRQSW*HKYQHK
Trigger: TTTGTGTTGGTATTTATGCCACCAACTCTGCCGAGG...GTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATCACTGTATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681525.1
CDS-3UTR CCA 90 bp CCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTATTGCTAAACCTCGGCAGAGTTaGTGGCATAAATACCAACAC +
Preference number: 4 (lower is better)
Translates to: PWSHDLKVLRKIYSDFIAKPRQS*WHKYQH
Trigger: GTGTTGGTATTTATGCCACCAACTCTGCCGAGGTTT...AGCAATAAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681525.1
CDS-3UTR CCA 90 bp TTTCATTTGTTCATTTCTTATCTGTTCCCAAGGTCCAGATTGAGTCTGTCTTGTATTGGCAGTCTGTACTaGATGATCGCTTTTAGGGGC +
Preference number: 4 (lower is better)
Translates to: FHLFISYLFPRSRLSLSCIGSLY*MIAFRG
Trigger: GCCCCTAAAAGCGATCATCCAGTACAGACTGCCAAT...ACAAGACAGACTCAATCTGGACCTTGGGAACAGATAAGAAATGAACAAATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587227.1
CDS-3UTR CCA 90 bp AAGATATACAGTGATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGATTGGCAGTCTGTACTaGATGATCGCTTTTAGGGGC +
Preference number: 4 (lower is better)
Translates to: KIYSDFIALKRMAGSSREIGSLY*MIAFRG
Trigger: GCCCCTAAAAGCGATCATCCAGTACAGACTGCCAAT...CTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATCACTGTATATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp TGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTATTGCTTTGATGACCTGCTCCAGTTaGGTGTCAGGGATACTTCTG +
Preference number: 4 (lower is better)
Translates to: WSHDLKVLRKIYSDFIALMTCSS*VSGILL
Trigger: CAGAAGTATCCCTGACACCCAACTGGAGCAGGTCAT...CAAAGCAATAAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp AGGCTTCCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTCCATCCTTGTTCTGCTaGAACAGCATATTCTTACAC +
Preference number: 4 (lower is better)
Translates to: RLPWSHDLKVLRKIYSDFPSLFC*NSIFLH
Trigger: GTGTAAGAATATGCTGTTCCAGCAGAACAAGGATGG...AAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCAGGGAAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp TGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTATTGCTTTGCCCAATAGGCTTCCCTaGAGTCATGACTTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: WSHDLKVLRKIYSDFIALPNRLP*SHDLKV
Trigger: GACCTTCAAGTCATGACTCCAGGGAAGCCTATTGGG...CAAAGCAATAAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp ATATACAGTGATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACGCAGGTGAGTTGATTTaGGGGTCCAGTTCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: IYSDFIALKRMAGSSREHAGELI*GSSSSN
Trigger: ATTTGAAGAACTGGACCCCCAAATCAACTCACCTGC...GTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATCACTGTATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp TGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTATTGCTTTGTCTTTAGCTCCTTCTTaGGTCTTTGGGGTTCCAGTC +
Preference number: 4 (lower is better)
Translates to: WSHDLKVLRKIYSDFIALSLAPS*VFGVPV
Trigger: GACTGGAACCCCAAAGACTCAAGAAGGAGCTAAAGA...CAAAGCAATAAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp ATATACAGTGATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACATCTTCTCCCAAATTTaGGGCACTCCAATGAAGACA +
Preference number: 4 (lower is better)
Translates to: IYSDFIALKRMAGSSREHIFSQI*GTPMKT
Trigger: TGTCTTCATTGGAGTGCCTCAAATTTGGGAGAAGAT...GTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATCACTGTATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp CCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTATTGCTATCTTCTCCCAAATTTaGGGCACTCCAATGAAGACA +
Preference number: 4 (lower is better)
Translates to: PWSHDLKVLRKIYSDFIAIFSQI*GTPMKT
Trigger: TGTCTTCATTGGAGTGCCTCAAATTTGGGAGAAGAT...AGCAATAAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp TTTCTTGTAAATCAGGCAGTTTTTAGTAGACTTCCCAATAGGCTTCCCTGGAGTCAAGAAACTGACCAATaGGGAATGTGGCTTCTTAAA +
Preference number: 4 (lower is better)
Translates to: FLVNQAVFSRLPNRLPWSQETDQ*GMWLLK
Trigger: TTTAAGAAGCCACATTCCTCATTGGTCAGTTTCTTG...ACTCCAGGGAAGCCTATTGGGAAGTCTACTAAAAACTGCCTGATTTACAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR GCA 90 bp GAAATCATCCCAAGAGTACAAGTTGTTGTTCTTCTTCATTGGCAGTCTGTACTGGTGTTTTCTTCTTCCTaGAAAGACAGTCAACAGGTA +
Preference number: 4 (lower is better)
Translates to: EIIPRVQVVVLLHWQSVLVFSSS*KDSQQV
Trigger: TACCTGTTGACTGTCTTTGCAGGAAGAAGAAAACAC...CAGTACAGACTGCCAATGAAGAAGAACAACAACTTGTACTCTTGGGATGATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587617.1
ENST00000592677.5
CDS-3UTR GCA 90 bp TGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTATTGCTTTGCTTGATCAAGGATTTTaGAGCCTTCCGACAAGCCTC +
Preference number: 4 (lower is better)
Translates to: WSHDLKVLRKIYSDFIALLDQGF*SLPTSL
Trigger: GAGGCTTGTCGGAAGGCTGCAAAATCCTTGATCAAG...CAAAGCAATAAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR GCA 90 bp CATGAAATCATCCCAAGAGTACAAGTTGTTGTTCTTCTTCATTGGCAGTCTGTAAGTGATAAACCACTCTaGAGAGTTAAACCCCAGGAT +
Preference number: 4 (lower is better)
Translates to: HEIIPRVQVVVLLHWQSVSDKPL*RVKPQD
Trigger: ATCCTGGGGTTTAACTCTGCAGAGTGGTTTATCACT...TACAGACTGCCAATGAAGAAGAACAACAACTTGTACTCTTGGGATGATTTCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR CCA 90 bp TGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTATTGCTTTGTCCTTCTTGAGTCTTTaGGGTTCCAGTCATTCCAGG +
Preference number: 4 (lower is better)
Translates to: WSHDLKVLRKIYSDFIALSFLSL*GSSHSR
Trigger: CCTGGAATGACTGGAACCCCAAAGACTCAAGAAGGA...CAAAGCAATAAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp GAGTACAAGTTGTTGTTCTTCTTCATTGGCAGTCTGTACTGGATGATCGCTTTTGTTGTTCTTCTTCATTaGCAGTCTGTACTGGATGAT +
Preference number: 4 (lower is better)
Translates to: EYKLLFFFIGSLYWMIAFVVLLH*QSVLDD
Trigger: ATCATCCAGTACAGACTGCCAATGAAGAAGAACAAC...AAAAGCGATCATCCAGTACAGACTGCCAATGAAGAAGAACAACAACTTGTACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR CCA 90 bp TTTCTTGTAAATCAGGCAGTTTTTAGTAGACTTCCCAATAGGCTTCCCTGGAGTGTTGTTCTTCTTCATTaGCAGTCTGTACTGGATGAT +
Preference number: 4 (lower is better)
Translates to: FLVNQAVFSRLPNRLPWSVVLLH*QSVLDD
Trigger: ATCATCCAGTACAGACTGCCAATGAAGAAGAACAAC...ACTCCAGGGAAGCCTATTGGGAAGTCTACTAAAAACTGCCTGATTTACAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp AGGCTTCCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTATTATCAGGACTTATTaGAAGGGTTTCCCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: RLPWSHDLKVLRKIYSDFIIRTY*KGFPVA
Trigger: AGCAACTGGGAAACCCTTCCAATAAGTCCTGATAAT...AAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCAGGGAAGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
3UTR CAA 72 bp AAGGTCCTTAGAAAGATATACAGTGATTTTATTGCTTaGAAACGTATGGCAGGTTCTTCTAGGGAGCACCTC +
Preference number: 4 (lower is better)
Translates to: KVLRKIYSDFIA*KRMAGSSREHL
Trigger: GAGGTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATCACTGTATATCTTTCTAAGGACCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp CCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTATTGCTCCTCATAGTACTGGTTaGAATTCAGAATTTCCCACT +
Preference number: 4 (lower is better)
Translates to: PWSHDLKVLRKIYSDFIAPHSTG*NSEFPT
Trigger: AGTGGGAAATTCTGAATTTCAACCAGTACTATGAGG...AGCAATAAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp TTGTTCATTTCTTATCTGTTCCCAAGGTCCAGATTGAGTCTGTCTTGTTTGCTGATTTTCTGTAACTGTTaGTCATTCTCAACCAGCAAG +
Preference number: 4 (lower is better)
Translates to: LFISYLFPRSRLSLSCLLIFCNC*SFSTSK
Trigger: CTTGCTGGTTGAGAATGATCAACAGTTACAGAAAAT...CAGCAAACAAGACAGACTCAATCTGGACCTTGGGAACAGATAAGAAATGAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587227.1
CDS-3UTR GCA 90 bp TGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTATTGCTTTGGAAGCCAATGTTTCTTaGCCACACGAATGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: WSHDLKVLRKIYSDFIALEANVS*PHECLL
Trigger: AAGAAGGCATTCGTGTGGGCAAGAAACATTGGCTTC...CAAAGCAATAAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
3UTR CAA 72 bp AGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACTaGAAGGTCCTTAGAAAGATATACAGTGATTTTATT +
Preference number: 4 (lower is better)
Translates to: SRLPNRLPWSHD*KVLRKIYSDFI
Trigger: AATAAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR GCA 90 bp AAGATATACAGTGATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGGTGTTTTCTTCTTCCTaGAAAGACAGTCAACAGGTA +
Preference number: 4 (lower is better)
Translates to: KIYSDFIALKRMAGSSREVFSSS*KDSQQV
Trigger: TACCTGTTGACTGTCTTTGCAGGAAGAAGAAAACAC...CTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATCACTGTATATCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681525.1
CDS-3UTR GCA 90 bp TGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTATTGCTTTGAGTGATAAACCACTCTaGAGAGTTAAACCCCAGGAT +
Preference number: 4 (lower is better)
Translates to: WSHDLKVLRKIYSDFIALSDKPL*RVKPQD
Trigger: ATCCTGGGGTTTAACTCTGCAGAGTGGTTTATCACT...CAAAGCAATAAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR GCA 90 bp TGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTATTGCTTTGCTTTTCAATCCTCTGTaGATTGTTCATGGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: WSHDLKVLRKIYSDFIALLFNPL*IVHGFL
Trigger: CAGGAAGCCATGAACAATGCACAGAGGATTGAAAAG...CAAAGCAATAAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CCA 90 bp TTTCATTTGTTCATTTCTTATCTGTTCCCAAGGTCCAGATTGAGTCTGTCTTGTGTTGTTCTTCTTCATTaGCAGTCTGTACTGGATGAT +
Preference number: 4 (lower is better)
Translates to: FHLFISYLFPRSRLSLSCVVLLH*QSVLDD
Trigger: ATCATCCAGTACAGACTGCCAATGAAGAAGAACAAC...ACAAGACAGACTCAATCTGGACCTTGGGAACAGATAAGAAATGAACAAATGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587227.1
CDS-3UTR TCA 90 bp TGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTATTGCTTTGCAAGAAACTGACCAATaGGGAATGTGGCTTCTTAAA +
Preference number: 4 (lower is better)
Translates to: WSHDLKVLRKIYSDFIALQETDQ*GMWLLK
Trigger: TTTAAGAAGCCACATTCCTCATTGGTCAGTTTCTTG...CAAAGCAATAAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR GCA 90 bp TGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTATTGCTTTGGTGTTTTCTTCTTCCTaGAAAGACAGTCAACAGGTA +
Preference number: 4 (lower is better)
Translates to: WSHDLKVLRKIYSDFIALVFSSS*KDSQQV
Trigger: TACCTGTTGACTGTCTTTGCAGGAAGAAGAAAACAC...CAAAGCAATAAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681525.1
CDS-3UTR CCA 90 bp TGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTATTGCTTTGGTTGTTCTTCTTCATTaGCAGTCTGTACTGGATGAT +
Preference number: 4 (lower is better)
Translates to: WSHDLKVLRKIYSDFIALVVLLH*QSVLDD
Trigger: ATCATCCAGTACAGACTGCCAATGAAGAAGAACAAC...CAAAGCAATAAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR TCA 90 bp TGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTATTGCTTTGGTGATTTTATTGCTTTaGAACGTATGGCAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: WSHDLKVLRKIYSDFIALVILLL*NVWQVL
Trigger: AAGAACCTGCCATACGTTTCAAAGCAATAAAATCAC...CAAAGCAATAAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS GCA 90 bp ACAGGTGCAGTCCTTCCTTGGGGCCTTCGTACGGGCTGTGCCCTCTaGCTGGAACTCTCTTCCCCTCAGATAGCTGGGACTACAGAAGCA +
Preference number: 5 (lower is better)
Translates to: TGAVLPWGLRTGCAL*LELSSPQIAGTTEA
Trigger: TGCTTCTGTAGTCCCAGCTATCTGAGGGGAAGAGAGTTCCAGGCAGAGGGCACAGCCCGTACGAAGGCCCCAAGGAAGGACTGCACCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589401.5
CDS GCA 90 bp TTCCAGTCATTCCAGGTGTGCAGAAACCATGCTCCACAGCACAGGTaGAGTCCTTCCTTGGGGCCTTCGTACGGGCTGTGCCCTCTGCCT +
Preference number: 5 (lower is better)
Translates to: FQSFQVCRNHAPQHR*SPSLGPSYGLCPLP
Trigger: AGGCAGAGGGCACAGCCCGTACGAAGGCCCCAAGGAAGGACTGCACCTGTGCTGTGGAGCATGGTTTCTGCACACCTGGAATGACTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589401.5
CDS CCA 90 bp ATGCCACTACGCCTGGCACTGGCACCTGTCACTCTTCAAGAGGTGTaGTTCTGGCCATCTGGCAAGGCACCTGGAGCTGGGACATCTGGT +
Preference number: 5 (lower is better)
Translates to: MPLRLALAPVTLQEV*FWPSGKAPGAGTSG
Trigger: ACCAGATGTCCCAGCTCCAGGTGCCTTGCCAGATGGCCAGAACCACACCTCTTGAAGAGTGACAGGTGCCAGTGCCAGGCGTAGTGGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589401.5
CDS CCA 90 bp ACCATGCTCCACAGCACACTGGCACCTGTCACTCTTCAAGAGGTGTaGTTCTGGCCATCTGGCAAGGCACCTGGAGCTGGGACATCTGGT +
Preference number: 5 (lower is better)
Translates to: TMLHSTLAPVTLQEV*FWPSGKAPGAGTSG
Trigger: ACCAGATGTCCCAGCTCCAGGTGCCTTGCCAGATGGCCAGAACCACACCTCTTGAAGAGTGACAGGTGCCAGTGTGCTGTGGAGCATGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586696.5
CDS-3UTR CAA 90 bp CGCCTTCTGGCTCTCGATGACCTGCTCCAGTTGGGTGTCAGGGATACTTCTGCCGATGAGCACTGCGCATaGATTCGCCTTCTGGCTCTC +
Preference number: 5 (lower is better)
Translates to: RLLALDDLLQLGVRDTSADEHCA*IRLLAL
Trigger: GAGAGCCAGAAGGCGAATCAATGCGCAGTGCTCATC...GGCAGAAGTATCCCTGACACCCAACTGGAGCAGGTCATCGAGAGCCAGAAGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR CAA 90 bp GCATTGATTCGCCTTCTGGCTCTCGATGACCTGCTCCAGTTGGGTGTCAGGGATCTGAGCATCACTCCCTaGGGTATGCCTGTGGTCCCT +
Preference number: 5 (lower is better)
Translates to: ALIRLLALDDLLQLGVRDLSITP*GMPVVP
Trigger: AGGGACCACAGGCATACCCAAGGGAGTGATGCTCAG...ATCCCTGACACCCAACTGGAGCAGGTCATCGAGAGCCAGAAGGCGAATCAATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592677.5
ENST00000681479.1
CDS-3UTR CAA 90 bp TTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCTCGGCAGTCTCTTGGTaGAGGGGCGCAGTCCCACTG +
Preference number: 5 (lower is better)
Translates to: LLEGFPSCFQAGELIWGSSAVSW*RGAVPL
Trigger: CAGTGGGACTGCGCCCCTCAACCAAGAGACTGCCGA...GGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CAA 90 bp TTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCGAACTCGGCAGTCTCTaGGTTGAGGGGCGCAGTCCC +
Preference number: 5 (lower is better)
Translates to: LLEGFPSCFQAGELIWGSELGSL*VEGRSP
Trigger: GGGACTGCGCCCCTCAACCAAGAGACTGCCGAGTTC...GGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS GCA 90 bp TGCCTGGAACTCTCTTCCCCTCAGATAGCTGGGACTACAGAAGCATaGCACTACGCCTGGCACTGGCACCTGTCACTCTTCAAGAGGTGT +
Preference number: 5 (lower is better)
Translates to: CLELSSPQIAGTTEA*HYAWHWHLSLFKRC
Trigger: ACACCTCTTGAAGAGTGACAGGTGCCAGTGCCAGGCGTAGTGGCATGCTTCTGTAGTCCCAGCTATCTGAGGGGAAGAGAGTTCCAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589401.5
CDS CCA 90 bp GGTGTGGTTCTGGCCATCTGGCAAGGCACCTGGAGCTGGGACATCTaGTCACTCAGGTGTTTTCTTCTTCCTTCCAGAACGTTCCATCCC +
Preference number: 5 (lower is better)
Translates to: GVVLAIWQGTWSWDI*SLRCFLLPSRTFHP
Trigger: GGGATGGAACGTTCTGGAAGGAAGAAGAAAACACCTGAGTGACCAGATGTCCCAGCTCCAGGTGCCTTGCCAGATGGCCAGAACCACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681479.1
CDS-3UTR CAA 90 bp AGGTTCTCCGCTCATCTGATTCATCTCACACTTCAGCGTCAGCAACATGCTCAGGAACTCGGCAGTCTCTaGGTTGAGGGGCGCAGTCCC +
Preference number: 5 (lower is better)
Translates to: RFSAHLIHLTLQRQQHAQELGSL*VEGRSP
Trigger: GGGACTGCGCCCCTCAACCAAGAGACTGCCGAGTTC...CTGAGCATGTTGCTGACGCTGAAGTGTGAGATGAATCAGATGAGCGGAGAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681479.1
CDS-3UTR CAA 90 bp CTTCTGGCTCTCGATGACCTGCTCCAGTTGGGTGTCAGGGATACTTCTGCCAAGAGACCCCGACAGAAGTaGATGGCCTCGAAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: LLALDDLLQLGVRDTSAKRPRQK*MASKFS
Trigger: GCTGAACTTCGAGGCCATCAACTTCTGTCGGGGTCT...CTTGGCAGAAGTATCCCTGACACCCAACTGGAGCAGGTCATCGAGAGCCAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681479.1
CDS-3UTR CAA 90 bp GGCCTTGTAGACCAGGGGGTCTTGCTGCTTCACAATCTCAGTCACGGTGGATGCGTAGACCAGGGGGTCTaGCTGCTTCACAATCTCAGT +
Preference number: 5 (lower is better)
Translates to: GLVDQGVLLLHNLSHGGCVDQGV*LLHNLS
Trigger: ACTGAGATTGTGAAGCAGCAAGACCCCCTGGTCTAC...GCATCCACCGTGACTGAGATTGTGAAGCAGCAAGACCCCCTGGTCTACAAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000681479.1
CDS-3UTR CAA 90 bp CTTCTGGCTCTCGATGACCTGCTCCAGTTGGGTGTCAGGGATACTTCTGCCAAGCGCTCCAAACCCAGCTaGATCAAGGATTTTGCAGCC +
Preference number: 5 (lower is better)
Translates to: LLALDDLLQLGVRDTSAKRSKPS*IKDFAA
Trigger: GGCTGCAAAATCCTTGATCAAGCTGGGTTTGGAGCG...CTTGGCAGAAGTATCCCTGACACCCAACTGGAGCAGGTCATCGAGAGCCAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR CAA 90 bp GAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTGATGAGCACTGCGCATaGATTCGCCTTCTGGCTCTC +
Preference number: 5 (lower is better)
Translates to: EGFPSCFQAGELIWGSSSDEHCA*IRLLAL
Trigger: GAGAGCCAGAAGGCGAATCAATGCGCAGTGCTCATC...AGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CAA 90 bp GACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGCTGAGCATCACTCCCTaGGGTATGCCTGTGGTCCCT +
Preference number: 5 (lower is better)
Translates to: DLLEGFPSCFQAGELIWGLSITP*GMPVVP
Trigger: AGGGACCACAGGCATACCCAAGGGAGTGATGCTCAG...CCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CAA 90 bp AAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGGAACTCGGCAGTCTCTaGGTTGAGGGGCGCAGTCCC +
Preference number: 5 (lower is better)
Translates to: KRMAGSSREHLSNRRTIKELGSL*VEGRSP
Trigger: GGGACTGCGCCCCTCAACCAAGAGACTGCCGAGTTC...CTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS CCA 90 bp TGTCACTCTTCAAGAGGTGTGGTTCTGGCCATCTGGCAAGGCACCTaGAGCTGGGACATCTGGTCACTCAGGTGTTTTCTTCTTCCTGCA +
Preference number: 5 (lower is better)
Translates to: CHSSRGVVLAIWQGT*SWDIWSLRCFLLPA
Trigger: TGCAGGAAGAAGAAAACACCTGAGTGACCAGATGTCCCAGCTCCAGGTGCCTTGCCAGATGGCCAGAACCACACCTCTTGAAGAGTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000589401.5
ENST00000592677.5
ENST00000681525.1
CDS CCA 90 bp AAAATTCAGGGATGGTCATCGGGGTCTCATGGCCTGGTCCGTGTTTaGATAGCCTCAGAAGGACTTCTCCATCTCGACAGGTGGTCCACA +
Preference number: 5 (lower is better)
Translates to: KIQGWSSGSHGLVRV*IASEGLLHLDRWST
Trigger: TGTGGACCACCTGTCGAGATGGAGAAGTCCTTCTGAGGCTATCCAAACACGGACCAGGCCATGAGACCCCGATGACCATCCCTGAATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000586696.5
ENST00000587617.1
ENST00000588304.5
ENST00000588485.6
ENST00000588722.5
ENST00000589401.5
ENST00000591403.5
ENST00000591738.5
ENST00000592677.5
ENST00000681479.1
ENST00000681525.1
CDS CCA 90 bp TCTTCAAGAGGTGTGGTTCTGGCCATCTGGCAAGGCACCTGGAGCTaGGACATCTGGTCACTCAGGTGTTTTCTTCTTCCCCATTCAACC +
Preference number: 5 (lower is better)
Translates to: SSRGVVLAIWQGTWS*DIWSLRCFLLPHST
Trigger: GGTTGAATGGGGAAGAAGAAAACACCTGAGTGACCAGATGTCCCAGCTCCAGGTGCCTTGCCAGATGGCCAGAACCACACCTCTTGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588722.5
CDS CCA 90 bp TGTCACTCTTCAAGAGGTGTGGTTCTGGCCATCTGGCAAGGCACCTaGAGCTGGGACATCTGGTCACTCAGGTGTTTTCTTCTTCCCCAT +
Preference number: 5 (lower is better)
Translates to: CHSSRGVVLAIWQGT*SWDIWSLRCFLLPH
Trigger: ATGGGGAAGAAGAAAACACCTGAGTGACCAGATGTCCCAGCTCCAGGTGCCTTGCCAGATGGCCAGAACCACACCTCTTGAAGAGTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588722.5
CDS CCA 90 bp TCTTCAAGAGGTGTGGTTCTGGCCATCTGGCAAGGCACCTGGAGCTaGGACATCTGGTCACTCAGGTGTTTTCTTCTTCCTTCCAGAACG +
Preference number: 5 (lower is better)
Translates to: SSRGVVLAIWQGTWS*DIWSLRCFLLPSRT
Trigger: CGTTCTGGAAGGAAGAAGAAAACACCTGAGTGACCAGATGTCCCAGCTCCAGGTGCCTTGCCAGATGGCCAGAACCACACCTCTTGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681479.1
CDS CCA 90 bp TGTCACTCTTCAAGAGGTGTGGTTCTGGCCATCTGGCAAGGCACCTaGAGCTGGGACATCTGGTCACTCAGGTGTTTTCTTCTTCCTTCC +
Preference number: 5 (lower is better)
Translates to: CHSSRGVVLAIWQGT*SWDIWSLRCFLLPS
Trigger: GGAAGGAAGAAGAAAACACCTGAGTGACCAGATGTCCCAGCTCCAGGTGCCTTGCCAGATGGCCAGAACCACACCTCTTGAAGAGTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681479.1
CDS-3UTR CAA 90 bp CCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTTCAAATCTGTGGCCTGGTCCGTGTTaGGATAGCCTCAGAAGGACT +
Preference number: 5 (lower is better)
Translates to: PSCFQAGELIWGSSSSNLWPGPC*DSLRRT
Trigger: AGTCCTTCTGAGGCTATCCAAACACGGACCAGGCCA...CAGATTTGAAGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CAA 90 bp AGTGTAGATGAGCACTGCGCATTGATTCGCCTTCTGGCTCTCGATGACCTGCTCGATGACCTGCTCCAGTaGGGTGTCAGGGATACTTCT +
Preference number: 5 (lower is better)
Translates to: SVDEHCALIRLLALDDLLDDLLQ*GVRDTS
Trigger: AGAAGTATCCCTGACACCCAACTGGAGCAGGTCATC...GAGCAGGTCATCGAGAGCCAGAAGGCGAATCAATGCGCAGTGCTCATCTACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR CAA 90 bp AACAGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATGAGGTCTCGGCAGTCTCTTGGTaGAGGGGCGCAGTCCCACTG +
Preference number: 5 (lower is better)
Translates to: NSRESFYLEQHFTYCNEVSAVSW*RGAVPL
Trigger: CAGTGGGACTGCGCCCCTCAACCAAGAGACTGCCGA...GACCTCATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp GAACAGCTGAGAGCAGCTCCATCAAAGCAGTCAGTGGTACATGTGATCAATTTGTCGGCAGTCTCTTGGTaGAGGGGCGCAGTCCCACTG +
Preference number: 5 (lower is better)
Translates to: EQLRAAPSKQSVVHVINLSAVSW*RGAVPL
Trigger: CAGTGGGACTGCGCCCCTCAACCAAGAGACTGCCGA...CAAATTGATCACATGTACCACTGACTGCTTTGATGGAGCTGCTCTCAGCTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681479.1
CDS-3UTR CAA 90 bp AGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGTCGGCAGTCTCTTGGTaGAGGGGCGCAGTCCCACTG +
Preference number: 5 (lower is better)
Translates to: SRLPNRLPWSHDLKVLRKSAVSW*RGAVPL
Trigger: CAGTGGGACTGCGCCCCTCAACCAAGAGACTGCCGA...CTTTCTAAGGACCTTCAAGTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp AGTGCTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGGAACTCGGCAGTCTCTaGGTTGAGGGGCGCAGTCCC +
Preference number: 5 (lower is better)
Translates to: SALLSGLIGRVSQLLPGRELGSL*VEGRSP
Trigger: GGGACTGCGCCCCTCAACCAAGAGACTGCCGAGTTC...CCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CAA 90 bp TATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTGAACTCGGCAGTCTCTaGGTTGAGGGGCGCAGTCCC +
Preference number: 5 (lower is better)
Translates to: YQDLLEGFPSCFQAGELIELGSL*VEGRSP
Trigger: GGGACTGCGCCCCTCAACCAAGAGACTGCCGAGTTC...AATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CAA 90 bp GAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTGTAGACCAGGGGGTCTaGCTGCTTCACAATCTCAGT +
Preference number: 5 (lower is better)
Translates to: EGFPSCFQAGELIWGSSSVDQGV*LLHNLS
Trigger: ACTGAGATTGTGAAGCAGCAAGACCCCCTGGTCTAC...AGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CAA 90 bp GACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCTGGTTCACAGCATaGATGCCTTGCTGGATGGCC +
Preference number: 5 (lower is better)
Translates to: DLLEGFPSCFQAGELIWGSWFTA*MPCWMA
Trigger: GGCCATCCAGCAAGGCATCAATGCTGTGAACCAGGA...CCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS CCA 90 bp TCTTCAAGAGGTGTGGTTCTGGCCATCTGGCAAGGCACCTGGAGCTaGGACATCTGGTCACTCAGGTGTTTTCTTCTTCCTGCAAAGACA +
Preference number: 5 (lower is better)
Translates to: SSRGVVLAIWQGTWS*DIWSLRCFLLPAKT
Trigger: TGTCTTTGCAGGAAGAAGAAAACACCTGAGTGACCAGATGTCCCAGCTCCAGGTGCCTTGCCAGATGGCCAGAACCACACCTCTTGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000589401.5
ENST00000592677.5
ENST00000681525.1
CDS CCA 90 bp TGTCACTCTTCAAGAGGTGTGGTTCTGGCCATCTGGCAAGGCACCTaGAGCTGGGACATCTGGTCACTCAGGTGTTTTCTTCTTCCATTG +
Preference number: 5 (lower is better)
Translates to: CHSSRGVVLAIWQGT*SWDIWSLRCFLLPL
Trigger: CAATGGAAGAAGAAAACACCTGAGTGACCAGATGTCCCAGCTCCAGGTGCCTTGCCAGATGGCCAGAACCACACCTCTTGAAGAGTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591738.5
CDS-3UTR CAA 90 bp GCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACATGGCCTGGTCCGTGTTaGGATAGCCTCAGAAGGACT +
Preference number: 5 (lower is better)
Translates to: ALKRMAGSSREHLSNRRTWPGPC*DSLRRT
Trigger: AGTCCTTCTGAGGCTATCCAAACACGGACCAGGCCA...TGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp AAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGCTGAGCATCACTCCCTaGGGTATGCCTGTGGTCCCT +
Preference number: 5 (lower is better)
Translates to: KRMAGSSREHLSNRRTIKLSITP*GMPVVP
Trigger: AGGGACCACAGGCATACCCAAGGGAGTGATGCTCAG...CTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp GACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGCACCCAGTCAAGATCTaGCCACAGCTTAGAAGCCTG +
Preference number: 5 (lower is better)
Translates to: DLLEGFPSCFQAGELIWGHPVKI*PQLRSL
Trigger: CAGGCTTCTAAGCTGTGGCAAGATCTTGACTGGGTG...CCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CAA 90 bp GAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTTCCCCAATGCCATCCTaGTTCTGCTGGAACAGCATA +
Preference number: 5 (lower is better)
Translates to: EGFPSCFQAGELIWGSSSSPMPS*FCWNSI
Trigger: TATGCTGTTCCAGCAGAACAAGGATGGCATTGGGGA...AGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CAA 90 bp GTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGAAACGCCTCGAAGTTCAGCTaGTCCAGAGGTTCTCCGCTC +
Preference number: 5 (lower is better)
Translates to: VWQVLLGSTSPTDEQSRNASKFS*SRGSPL
Trigger: GAGCGGAGAACCTCTGGACAAGCTGAACTTCGAGGC...GTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CAA 90 bp GCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACAAGACCCCGACAGAAGTaGATGGCCTCGAAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: ALKRMAGSSREHLSNRRTRPRQK*MASKFS
Trigger: GCTGAACTTCGAGGCCATCAACTTCTGTCGGGGTCT...TGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CAA 90 bp CCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTTCAAATCTGGTAGACCAGGGGGTCTaGCTGCTTCACAATCTCAGT +
Preference number: 5 (lower is better)
Translates to: PSCFQAGELIWGSSSSNLVDQGV*LLHNLS
Trigger: ACTGAGATTGTGAAGCAGCAAGACCCCCTGGTCTAC...CAGATTTGAAGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CAA 90 bp GACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGCTCCTTCTTGAGTCTTaGGGGTTCCAGTCATTCCAG +
Preference number: 5 (lower is better)
Translates to: DLLEGFPSCFQAGELIWGLLLES*GFQSFQ
Trigger: CTGGAATGACTGGAACCCCAAAGACTCAAGAAGGAG...CCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CAA 90 bp GCATTGATTCGCCTTCTGGCTCTCGATGACCTGCTCCAGTTGGGTGTCAGGGATATCTTTAGCTCCTTCTaGAGTCTTTGGGGTTCCAGT +
Preference number: 5 (lower is better)
Translates to: ALIRLLALDDLLQLGVRDIFSSF*SLWGSS
Trigger: ACTGGAACCCCAAAGACTCAAGAAGGAGCTAAAGAT...ATCCCTGACACCCAACTGGAGCAGGTCATCGAGAGCCAGAAGGCGAATCAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR CAA 90 bp CTGGTTCACAGCATTGATGCCTTGCTGGATGGCCTTGTAGACCAGGGGGTCTTGATCTTTAGCTCCTTCTaGAGTCTTTGGGGTTCCAGT +
Preference number: 5 (lower is better)
Translates to: LVHSIDALLDGLVDQGVLIFSSF*SLWGSS
Trigger: ACTGGAACCCCAAAGACTCAAGAAGGAGCTAAAGAT...CAAGACCCCCTGGTCTACAAGGCCATCCAGCAAGGCATCAATGCTGTGAACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681479.1
CDS-3UTR CAA 90 bp GCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACACGCTCCAAACCCAGCTaGATCAAGGATTTTGCAGCC +
Preference number: 5 (lower is better)
Translates to: ALKRMAGSSREHLSNRRTRSKPS*IKDFAA
Trigger: GGCTGCAAAATCCTTGATCAAGCTGGGTTTGGAGCG...TGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp TCGATGACCTGCTCCAGTTGGGTGTCAGGGATACTTCTGCCAAGTTCCATGAAAGATGACCTGCTCCAGTaGGGTGTCAGGGATACTTCT +
Preference number: 5 (lower is better)
Translates to: SMTCSSWVSGILLPSSMKDDLLQ*GVRDTS
Trigger: AGAAGTATCCCTGACACCCAACTGGAGCAGGTCATC...TTTCATGGAACTTGGCAGAAGTATCCCTGACACCCAACTGGAGCAGGTCATCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR CAA 90 bp AGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGCTGAGCATCACTCCCTaGGGTATGCCTGTGGTCCCT +
Preference number: 5 (lower is better)
Translates to: SRLPNRLPWSHDLKVLRKLSITP*GMPVVP
Trigger: AGGGACCACAGGCATACCCAAGGGAGTGATGCTCAG...CTTTCTAAGGACCTTCAAGTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp GCATTGATTCGCCTTCTGGCTCTCGATGACCTGCTCCAGTTGGGTGTCAGGGATAGGGATGTCTTGACTTaGCTGAACACGAGAGTCTTA +
Preference number: 5 (lower is better)
Translates to: ALIRLLALDDLLQLGVRDRDVLT*LNTRVL
Trigger: TAAGACTCTCGTGTTCAGCAAAGTCAAGACATCCCT...ATCCCTGACACCCAACTGGAGCAGGTCATCGAGAGCCAGAAGGCGAATCAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681479.1
CDS-3UTR CAA 90 bp CTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGGCCTCGAAGTTCAGCTaGTCCAGAGGTTCTCCGCTC +
Preference number: 5 (lower is better)
Translates to: LYYQDLLEGFPSCFQAGEASKFS*SRGSPL
Trigger: GAGCGGAGAACCTCTGGACAAGCTGAACTTCGAGGC...CTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CAA 90 bp TTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTTCAAATAGACCCCGACAGAAGTaGATGGCCTCGAAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: FPSCFQAGELIWGSSSSNRPRQK*MASKFS
Trigger: GCTGAACTTCGAGGCCATCAACTTCTGTCGGGGTCT...ATTTGAAGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CAA 90 bp GCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACAGTAGACCAGGGGGTCTaGCTGCTTCACAATCTCAGT +
Preference number: 5 (lower is better)
Translates to: ALKRMAGSSREHLSNRRTVDQGV*LLHNLS
Trigger: ACTGAGATTGTGAAGCAGCAAGACCCCCTGGTCTAC...TGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp GCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACACACAGCATTGATGCCTaGCTGGATGGCCTTGTAGAC +
Preference number: 5 (lower is better)
Translates to: ALKRMAGSSREHLSNRRTHSIDA*LDGLVD
Trigger: GTCTACAAGGCCATCCAGCAAGGCATCAATGCTGTG...TGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp GTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGAAACTCCTGGTTCACAGCATaGATGCCTTGCTGGATGGCC +
Preference number: 5 (lower is better)
Translates to: VWQVLLGSTSPTDEQSRNSWFTA*MPCWMA
Trigger: GGCCATCCAGCAAGGCATCAATGCTGTGAACCAGGA...GTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp GCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACATTCCAGGCAGGTGAGTaGATTTGGGGGTCCAGTTCT +
Preference number: 5 (lower is better)
Translates to: ALKRMAGSSREHLSNRRTFQAGE*IWGSSS
Trigger: AGAACTGGACCCCCAAATCAACTCACCTGCCTGGAA...TGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp GTTCCCAAGGTCCAGATTGAGTCTGTCTTGTTTGCTGCTGTTTCCCCTGCTCCTTTGAGTCTGTCTTGTTaGCTGCTGTTTCCCCTGCTC +
Preference number: 5 (lower is better)
Translates to: VPKVQIESVLFAAVSPAPLSLSC*LLFPLL
Trigger: GAGCAGGGGAAACAGCAGCAAACAAGACAGACTCAA...AGGAGCAGGGGAAACAGCAGCAAACAAGACAGACTCAATCTGGACCTTGGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587227.1
CDS-3UTR CAA 90 bp TTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTTCAAATCGCTCCAAACCCAGCTaGATCAAGGATTTTGCAGCC +
Preference number: 5 (lower is better)
Translates to: FPSCFQAGELIWGSSSSNRSKPS*IKDFAA
Trigger: GGCTGCAAAATCCTTGATCAAGCTGGGTTTGGAGCG...ATTTGAAGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CAA 90 bp AAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGCGCTCCAAACCCAGCTaGATCAAGGATTTTGCAGCC +
Preference number: 5 (lower is better)
Translates to: KRMAGSSREHLSNRRTIKRSKPS*IKDFAA
Trigger: GGCTGCAAAATCCTTGATCAAGCTGGGTTTGGAGCG...CTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp TCCAGTTGGGTGTCAGGGATACTTCTGCCAAGTTCCATGAAATCATCCCAAGAGCGCTCCAAACCCAGCTaGATCAAGGATTTTGCAGCC +
Preference number: 5 (lower is better)
Translates to: SSWVSGILLPSSMKSSQERSKPS*IKDFAA
Trigger: GGCTGCAAAATCCTTGATCAAGCTGGGTTTGGAGCG...CTCTTGGGATGATTTCATGGAACTTGGCAGAAGTATCCCTGACACCCAACTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR CAA 90 bp TCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGGATGAGCACTGCGCATaGATTCGCCTTCTGGCTCTC +
Preference number: 5 (lower is better)
Translates to: SSREHLSNRRTIKKLTNEDEHCA*IRLLAL
Trigger: GAGAGCCAGAAGGCGAATCAATGCGCAGTGCTCATC...CTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp TATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTGATGAGCACTGCGCATaGATTCGCCTTCTGGCTCTC +
Preference number: 5 (lower is better)
Translates to: YQDLLEGFPSCFQAGELIDEHCA*IRLLAL
Trigger: GAGAGCCAGAAGGCGAATCAATGCGCAGTGCTCATC...AATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CAA 90 bp AGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGGATGAGCACTGCGCATaGATTCGCCTTCTGGCTCTC +
Preference number: 5 (lower is better)
Translates to: SRLPNRLPWSHDLKVLRKDEHCA*IRLLAL
Trigger: GAGAGCCAGAAGGCGAATCAATGCGCAGTGCTCATC...CTTTCTAAGGACCTTCAAGTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp GTAAATCAGGCAGTTTTTAGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACCTGAGCATCACTCCCTaGGGTATGCCTGTGGTCCCT +
Preference number: 5 (lower is better)
Translates to: VNQAVFSRLPNRLPWSHDLSITP*GMPVVP
Trigger: AGGGACCACAGGCATACCCAAGGGAGTGATGCTCAG...GTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACTAAAAACTGCCTGATTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp CTTAAAAACAGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATTCGGCAGTCTCTTGGTaGAGGGGCGCAGTCCCACTG +
Preference number: 5 (lower is better)
Translates to: LKNSRESFYLEQHFTYCNSAVSW*RGAVPL
Trigger: CAGTGGGACTGCGCCCCTCAACCAAGAGACTGCCGA...ATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCTGTTTTTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp GCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACATCCCCAATGCCATCCTaGTTCTGCTGGAACAGCATA +
Preference number: 5 (lower is better)
Translates to: ALKRMAGSSREHLSNRRTSPMPS*FCWNSI
Trigger: TATGCTGTTCCAGCAGAACAAGGATGGCATTGGGGA...TGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp GAAGTGCTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGCCTCGAAGTTCAGCTaGTCCAGAGGTTCTCCGCTC +
Preference number: 5 (lower is better)
Translates to: EVLYYQDLLEGFPSCFQAASKFS*SRGSPL
Trigger: GAGCGGAGAACCTCTGGACAAGCTGAACTTCGAGGC...TGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAGCACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CAA 90 bp GCGTCAGCAACATGCTCAGAAACTTCAGTTTATCTCCTACTAACATGGCGTTACGCCTCGAAGTTCAGCTaGTCCAGAGGTTCTCCGCTC +
Preference number: 5 (lower is better)
Translates to: ASATCSETSVYLLLTWRYASKFS*SRGSPL
Trigger: GAGCGGAGAACCTCTGGACAAGCTGAACTTCGAGGC...GTAACGCCATGTTAGTAGGAGATAAACTGAAGTTTCTGAGCATGTTGCTGACGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681479.1
CDS-3UTR CAA 90 bp GTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGAAACGTAGACCAGGGGGTCTaGCTGCTTCACAATCTCAGT +
Preference number: 5 (lower is better)
Translates to: VWQVLLGSTSPTDEQSRNVDQGV*LLHNLS
Trigger: ACTGAGATTGTGAAGCAGCAAGACCCCCTGGTCTAC...GTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp AACAGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATGAGGTCTCCTGGTTCACAGCATaGATGCCTTGCTGGATGGCC +
Preference number: 5 (lower is better)
Translates to: NSRESFYLEQHFTYCNEVSWFTA*MPCWMA
Trigger: GGCCATCCAGCAAGGCATCAATGCTGTGAACCAGGA...GACCTCATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp CAAGATGACCCACTTTTCAATCCTCTGTGCATTGTTCATGGCTTCCTGGTTCACTCCTGGTTCACAGCATaGATGCCTTGCTGGATGGCC +
Preference number: 5 (lower is better)
Translates to: QDDPLFNPLCIVHGFLVHSWFTA*MPCWMA
Trigger: GGCCATCCAGCAAGGCATCAATGCTGTGAACCAGGA...GTGAACCAGGAAGCCATGAACAATGCACAGAGGATTGAAAAGTGGGTCATCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590132.1
ENST00000681479.1
CDS-3UTR CAA 90 bp TTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCTCAATCCTCTGTGCATaGTTCATGGCTTCCTGGTTC +
Preference number: 5 (lower is better)
Translates to: LLEGFPSCFQAGELIWGSSILCA*FMASWF
Trigger: GAACCAGGAAGCCATGAACAATGCACAGAGGATTGA...GGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CAA 90 bp TTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTTCAAATTTCCAGGCAGGTGAGTaGATTTGGGGGTCCAGTTCT +
Preference number: 5 (lower is better)
Translates to: FPSCFQAGELIWGSSSSNFQAGE*IWGSSS
Trigger: AGAACTGGACCCCCAAATCAACTCACCTGCCTGGAA...ATTTGAAGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CAA 90 bp TGTTTCTTGCCCACACGAATGCCTTCTTCTTCAAGCCCATGGACTTGGCACTATTTCCAGGCAGGTGAGTaGATTTGGGGGTCCAGTTCT +
Preference number: 5 (lower is better)
Translates to: CFLPTRMPSSSSPWTWHYFQAGE*IWGSSS
Trigger: AGAACTGGACCCCCAAATCAACTCACCTGCCTGGAA...ATAGTGCCAAGTCCATGGGCTTGAAGAAGAAGGCATTCGTGTGGGCAAGAAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681479.1
CDS-3UTR CAA 90 bp GTTCCCAAGGTCCAGATTGAGTCTGTCTTGTTTGCTGCTGTTTCCCCTGCTCCTTTCCCAAGGTCCAGATaGAGTCTGTCTTGTTTGCTG +
Preference number: 5 (lower is better)
Translates to: VPKVQIESVLFAAVSPAPFPRSR*SLSCLL
Trigger: CAGCAAACAAGACAGACTCAATCTGGACCTTGGGAA...AGGAGCAGGGGAAACAGCAGCAAACAAGACAGACTCAATCTGGACCTTGGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587227.1
CDS CCA 90 bp TCCCAAGAGTACAAGTTGTTGTTCTTCTTCATTGGCAGTCTGTACTaGATGATCGCTTTTAGGGGCTCTAGGCTGCTCTGTGGAATCCGG +
Preference number: 5 (lower is better)
Translates to: SQEYKLLFFFIGSLY*MIAFRGSRLLCGIR
Trigger: CCGGATTCCACAGAGCAGCCTAGAGCCCCTAAAAGCGATCATCCAGTACAGACTGCCAATGAAGAAGAACAACAACTTGTACTCTTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR CAA 90 bp GACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGATCTTTAGCTCCTTCTaGAGTCTTTGGGGTTCCAGT +
Preference number: 5 (lower is better)
Translates to: DLLEGFPSCFQAGELIWGIFSSF*SLWGSS
Trigger: ACTGGAACCCCAAAGACTCAAGAAGGAGCTAAAGAT...CCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CAA 90 bp CGAATGCCTTCTTCTTCAAGCCCATGGACTTGGCACTATTTTTCTTCACCATCTTGGCCTGGTCCGTGTTaGGATAGCCTCAGAAGGACT +
Preference number: 5 (lower is better)
Translates to: RMPSSSSPWTWHYFSSPSWPGPC*DSLRRT
Trigger: AGTCCTTCTGAGGCTATCCAAACACGGACCAGGCCA...AGATGGTGAAGAAAAATAGTGCCAAGTCCATGGGCTTGAAGAAGAAGGCATTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681479.1
CDS-3UTR CAA 90 bp GATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACTGGCCTGGTCCGTGTTaGGATAGCCTCAGAAGGACT +
Preference number: 5 (lower is better)
Translates to: DFIALKRMAGSSREHLSNWPGPC*DSLRRT
Trigger: AGTCCTTCTGAGGCTATCCAAACACGGACCAGGCCA...GTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp CCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTTCAAATCTGAGAATTTCCCACTTTTaGCCATTCTTGGATGCGAGG +
Preference number: 5 (lower is better)
Translates to: PSCFQAGELIWGSSSSNLRISHF*PFLDAR
Trigger: CCTCGCATCCAAGAATGGCAAAAAGTGGGAAATTCT...CAGATTTGAAGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CAA 90 bp TATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTCGCTCCAAACCCAGCTaGATCAAGGATTTTGCAGCC +
Preference number: 5 (lower is better)
Translates to: YQDLLEGFPSCFQAGELIRSKPS*IKDFAA
Trigger: GGCTGCAAAATCCTTGATCAAGCTGGGTTTGGAGCG...AATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CAA 90 bp TCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGCGCTCCAAACCCAGCTaGATCAAGGATTTTGCAGCC +
Preference number: 5 (lower is better)
Translates to: SSREHLSNRRTIKKLTNERSKPS*IKDFAA
Trigger: GGCTGCAAAATCCTTGATCAAGCTGGGTTTGGAGCG...CTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp GAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTATGAGTGATGACATATaGACAAACCTCGGCAGAGTT +
Preference number: 5 (lower is better)
Translates to: EGFPSCFQAGELIWGSSSMSDDI*TNLGRV
Trigger: AACTCTGCCGAGGTTTGTCAATATGTCATCACTCAT...AGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
CDS-3UTR CAA 90 bp TGGGTGTCAGGGATACTTCTGCCAAGTTCCATGAAATCATCCCAAGAGTACAAGGATGACCTGCTCCAGTaGGGTGTCAGGGATACTTCT +
Preference number: 5 (lower is better)
Translates to: WVSGILLPSSMKSSQEYKDDLLQ*GVRDTS
Trigger: AGAAGTATCCCTGACACCCAACTGGAGCAGGTCATC...CTTGTACTCTTGGGATGATTTCATGGAACTTGGCAGAAGTATCCCTGACACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR CAA 90 bp GACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTTCAAGCCCATGGACTaGGCACTATTTTTCTTCACC +
Preference number: 5 (lower is better)
Translates to: DLLEGFPSCFQAGELIWGFKPMD*ALFFFT
Trigger: GGTGAAGAAAAATAGTGCCAAGTCCATGGGCTTGAA...CCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CAA 90 bp CCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTTCAAATCTGTTCAAGCCCATGGACTaGGCACTATTTTTCTTCACC +
Preference number: 5 (lower is better)
Translates to: PSCFQAGELIWGSSSSNLFKPMD*ALFFFT
Trigger: GGTGAAGAAAAATAGTGCCAAGTCCATGGGCTTGAA...CAGATTTGAAGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CAA 90 bp GAACAGCTGAGAGCAGCTCCATCAAAGCAGTCAGTGGTACATGTGATCAATTTGCACCCAGTCAAGATCTaGCCACAGCTTAGAAGCCTG +
Preference number: 5 (lower is better)
Translates to: EQLRAAPSKQSVVHVINLHPVKI*PQLRSL
Trigger: CAGGCTTCTAAGCTGTGGCAAGATCTTGACTGGGTG...CAAATTGATCACATGTACCACTGACTGCTTTGATGGAGCTGCTCTCAGCTGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681479.1
CDS-3UTR CAA 90 bp AAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGTCCCCAATGCCATCCTaGTTCTGCTGGAACAGCATA +
Preference number: 5 (lower is better)
Translates to: KRMAGSSREHLSNRRTIKSPMPS*FCWNSI
Trigger: TATGCTGTTCCAGCAGAACAAGGATGGCATTGGGGA...CTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp GTAAATCAGGCAGTTTTTAGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACAGACCCCGACAGAAGTaGATGGCCTCGAAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: VNQAVFSRLPNRLPWSHDRPRQK*MASKFS
Trigger: GCTGAACTTCGAGGCCATCAACTTCTGTCGGGGTCT...GTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACTAAAAACTGCCTGATTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CAA 90 bp GAAGTGCTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAAGACCCCGACAGAAGTaGATGGCCTCGAAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: EVLYYQDLLEGFPSCFQARPRQK*MASKFS
Trigger: GCTGAACTTCGAGGCCATCAACTTCTGTCGGGGTCT...TGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAGCACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CAA 90 bp TCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGGTAGACCAGGGGGTCTaGCTGCTTCACAATCTCAGT +
Preference number: 5 (lower is better)
Translates to: SSREHLSNRRTIKKLTNEVDQGV*LLHNLS
Trigger: ACTGAGATTGTGAAGCAGCAAGACCCCCTGGTCTAC...CTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp AGTGCTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGCACAGCATTGATGCCTaGCTGGATGGCCTTGTAGAC +
Preference number: 5 (lower is better)
Translates to: SALLSGLIGRVSQLLPGRHSIDA*LDGLVD
Trigger: GTCTACAAGGCCATCCAGCAAGGCATCAATGCTGTG...CCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CAA 90 bp GATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACTCCTGGTTCACAGCATaGATGCCTTGCTGGATGGCC +
Preference number: 5 (lower is better)
Translates to: DFIALKRMAGSSREHLSNSWFTA*MPCWMA
Trigger: GGCCATCCAGCAAGGCATCAATGCTGTGAACCAGGA...GTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp CTGAAGTGCTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGTCCTGGTTCACAGCATaGATGCCTTGCTGGATGGCC +
Preference number: 5 (lower is better)
Translates to: LKCFIIRTYWKGFPVASRSWFTA*MPCWMA
Trigger: GGCCATCCAGCAAGGCATCAATGCTGTGAACCAGGA...CCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAGCACTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CAA 90 bp CCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTTCAAATCTGCCCTGGAGTCATGACTaGAAGGTCCTTAGAAAGATA +
Preference number: 5 (lower is better)
Translates to: PSCFQAGELIWGSSSSNLPWSHD*KVLRKI
Trigger: TATCTTTCTAAGGACCTTCAAGTCATGACTCCAGGG...CAGATTTGAAGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CAA 90 bp AACAGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATGAGGTCTTCCAGGCAGGTGAGTaGATTTGGGGGTCCAGTTCT +
Preference number: 5 (lower is better)
Translates to: NSRESFYLEQHFTYCNEVFQAGE*IWGSSS
Trigger: AGAACTGGACCCCCAAATCAACTCACCTGCCTGGAA...GACCTCATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp AGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATGAGGTCTTCTTCCAGGCAGGTGAGTaGATTTGGGGGTCCAGTTCT +
Preference number: 5 (lower is better)
Translates to: SRESFYLEQHFTYCNEVFFQAGE*IWGSSS
Trigger: AGAACTGGACCCCCAAATCAACTCACCTGCCTGGAA...GAAGACCTCATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp AGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGCTCCTTCTTGAGTCTTaGGGGTTCCAGTCATTCCAG +
Preference number: 5 (lower is better)
Translates to: SRLPNRLPWSHDLKVLRKLLLES*GFQSFQ
Trigger: CTGGAATGACTGGAACCCCAAAGACTCAAGAAGGAG...CTTTCTAAGGACCTTCAAGTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp TCGATGACCTGCTCCAGTTGGGTGTCAGGGATACTTCTGCCAAGTTCCATGAAAATCTTTAGCTCCTTCTaGAGTCTTTGGGGTTCCAGT +
Preference number: 5 (lower is better)
Translates to: SMTCSSWVSGILLPSSMKIFSSF*SLWGSS
Trigger: ACTGGAACCCCAAAGACTCAAGAAGGAGCTAAAGAT...TTTCATGGAACTTGGCAGAAGTATCCCTGACACCCAACTGGAGCAGGTCATCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR CAA 90 bp CTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGGAATGTGGCTTCTTATGGCCTGGTCCGTGTTaGGATAGCCTCAGAAGGACT +
Preference number: 5 (lower is better)
Translates to: LSNRRTIKKLTNEECGFLWPGPC*DSLRRT
Trigger: AGTCCTTCTGAGGCTATCCAAACACGGACCAGGCCA...TAAGAAGCCACATTCCTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp CCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTTCAAATCTGATGAGTGATGACATATaGACAAACCTCGGCAGAGTT +
Preference number: 5 (lower is better)
Translates to: PSCFQAGELIWGSSSSNLMSDDI*TNLGRV
Trigger: AACTCTGCCGAGGTTTGTCAATATGTCATCACTCAT...CAGATTTGAAGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
CDS-3UTR CAA 90 bp TTCATTTCTTATCTGTTCCCAAGGTCCAGATTGAGTCTGTCTTGTTTGCTGCTGGATGAGCACTGCGCATaGATTCGCCTTCTGGCTCTC +
Preference number: 5 (lower is better)
Translates to: FISYLFPRSRLSLSCLLLDEHCA*IRLLAL
Trigger: GAGAGCCAGAAGGCGAATCAATGCGCAGTGCTCATC...CAGCAGCAAACAAGACAGACTCAATCTGGACCTTGGGAACAGATAAGAAATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587227.1
CDS-3UTR CAA 90 bp TTGTTCATTTCTTATCTGTTCCCAAGGTCCAGATTGAGTCTGTCTTGTTTGCTGCTGAGCATCACTCCCTaGGGTATGCCTGTGGTCCCT +
Preference number: 5 (lower is better)
Translates to: LFISYLFPRSRLSLSCLLLSITP*GMPVVP
Trigger: AGGGACCACAGGCATACCCAAGGGAGTGATGCTCAG...CAGCAAACAAGACAGACTCAATCTGGACCTTGGGAACAGATAAGAAATGAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587227.1
CDS-3UTR CAA 90 bp GACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTATCTTCTCCCAAATTaGAGGCACTCCAATGAAGAC +
Preference number: 5 (lower is better)
Translates to: DLLEGFPSCFQAGELIWGYLLPN*RHSNED
Trigger: GTCTTCATTGGAGTGCCTCAAATTTGGGAGAAGATA...CCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CAA 90 bp AAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGAAGCCAAGGGATGTCTaGACTTTGCTGAACACGAGA +
Preference number: 5 (lower is better)
Translates to: KRMAGSSREHLSNRRTIKKPRDV*TLLNTR
Trigger: TCTCGTGTTCAGCAAAGTCAAGACATCCCTTGGCTT...CTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp TCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGTCCCCAATGCCATCCTaGTTCTGCTGGAACAGCATA +
Preference number: 5 (lower is better)
Translates to: SSREHLSNRRTIKKLTNESPMPS*FCWNSI
Trigger: TATGCTGTTCCAGCAGAACAAGGATGGCATTGGGGA...CTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp TTTCTTGTAAATCAGGCAGTTTTTAGTAGACTTCCCAATAGGCTTCCCTGGAGTGCCTCGAAGTTCAGCTaGTCCAGAGGTTCTCCGCTC +
Preference number: 5 (lower is better)
Translates to: FLVNQAVFSRLPNRLPWSASKFS*SRGSPL
Trigger: GAGCGGAGAACCTCTGGACAAGCTGAACTTCGAGGC...ACTCCAGGGAAGCCTATTGGGAAGTCTACTAAAAACTGCCTGATTTACAAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CAA 90 bp GATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACTTCCAGGCAGGTGAGTaGATTTGGGGGTCCAGTTCT +
Preference number: 5 (lower is better)
Translates to: DFIALKRMAGSSREHLSNFQAGE*IWGSSS
Trigger: AGAACTGGACCCCCAAATCAACTCACCTGCCTGGAA...GTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp TTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCTATTATCAGGACTTATaGGAAGGGTTTCCCAGTTGC +
Preference number: 5 (lower is better)
Translates to: LLEGFPSCFQAGELIWGSYYQDL*EGFPSC
Trigger: GCAACTGGGAAACCCTTCCAATAAGTCCTGATAATA...GGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CAA 90 bp CCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTTCAAATCTGTATTATCAGGACTTATaGGAAGGGTTTCCCAGTTGC +
Preference number: 5 (lower is better)
Translates to: PSCFQAGELIWGSSSSNLYYQDL*EGFPSC
Trigger: GCAACTGGGAAACCCTTCCAATAAGTCCTGATAATA...CAGATTTGAAGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS CCA 90 bp TCCCAAGAGTACAAGTTGTTGTTCTTCTTCATTGGCAGTCTGTACTaGATGATCGCTTTTAGGGGCTCTAGGCTGCTCTGTGGAATCGAA +
Preference number: 5 (lower is better)
Translates to: SQEYKLLFFFIGSLY*MIAFRGSRLLCGIE
Trigger: TTCGATTCCACAGAGCAGCCTAGAGCCCCTAAAAGCGATCATCCAGTACAGACTGCCAATGAAGAAGAACAACAACTTGTACTCTTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000587227.1
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681525.1
CDS CCA 90 bp TCCCAAGAGTACAAGTTGTTGTTCTTCTTCATTGGCAGTCTGTACTaGATGATCGCTTTTAGGGGCTCTAGGCTGCTCTGTGGAATTCCA +
Preference number: 5 (lower is better)
Translates to: SQEYKLLFFFIGSLY*MIAFRGSRLLCGIP
Trigger: TGGAATTCCACAGAGCAGCCTAGAGCCCCTAAAAGCGATCATCCAGTACAGACTGCCAATGAAGAAGAACAACAACTTGTACTCTTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585526.5
CDS-3UTR CAA 90 bp GAAGTGCTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCACTCCTTCTTGAGTCTTaGGGGTTCCAGTCATTCCAG +
Preference number: 5 (lower is better)
Translates to: EVLYYQDLLEGFPSCFQALLLES*GFQSFQ
Trigger: CTGGAATGACTGGAACCCCAAAGACTCAAGAAGGAG...TGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAGCACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CAA 90 bp AGAGTACAAGTTGTTGTTCTTCTTCATTGGCAGTCTGTACTGGATGATCGCTTTTGGCCTGGTCCGTGTTaGGATAGCCTCAGAAGGACT +
Preference number: 5 (lower is better)
Translates to: RVQVVVLLHWQSVLDDRFWPGPC*DSLRRT
Trigger: AGTCCTTCTGAGGCTATCCAAACACGGACCAGGCCA...AAAGCGATCATCCAGTACAGACTGCCAATGAAGAAGAACAACAACTTGTACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR CAA 90 bp GAAATCATCCCAAGAGTACAAGTTGTTGTTCTTCTTCATTGGCAGTCTGTACTGTGGCCTGGTCCGTGTTaGGATAGCCTCAGAAGGACT +
Preference number: 5 (lower is better)
Translates to: EIIPRVQVVVLLHWQSVLWPGPC*DSLRRT
Trigger: AGTCCTTCTGAGGCTATCCAAACACGGACCAGGCCA...CAGTACAGACTGCCAATGAAGAAGAACAACAACTTGTACTCTTGGGATGATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR CAA 90 bp TTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTTCAAATAGAATTTCCCACTTTTaGCCATTCTTGGATGCGAGG +
Preference number: 5 (lower is better)
Translates to: FPSCFQAGELIWGSSSSNRISHF*PFLDAR
Trigger: CCTCGCATCCAAGAATGGCAAAAAGTGGGAAATTCT...ATTTGAAGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CAA 90 bp CTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGGAATGTGGCTTCTTAGATGACCTGCTCCAGTaGGGTGTCAGGGATACTTCT +
Preference number: 5 (lower is better)
Translates to: LSNRRTIKKLTNEECGFLDDLLQ*GVRDTS
Trigger: AGAAGTATCCCTGACACCCAACTGGAGCAGGTCATC...TAAGAAGCCACATTCCTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp GAGTACAAGTTGTTGTTCTTCTTCATTGGCAGTCTGTACTGGATGATCGCTTTTGATGAGCACTGCGCATaGATTCGCCTTCTGGCTCTC +
Preference number: 5 (lower is better)
Translates to: EYKLLFFFIGSLYWMIAFDEHCA*IRLLAL
Trigger: GAGAGCCAGAAGGCGAATCAATGCGCAGTGCTCATC...AAAAGCGATCATCCAGTACAGACTGCCAATGAAGAAGAACAACAACTTGTACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR CAA 90 bp CTTAAAAACAGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATGATGAGCACTGCGCATaGATTCGCCTTCTGGCTCTC +
Preference number: 5 (lower is better)
Translates to: LKNSRESFYLEQHFTYCNDEHCA*IRLLAL
Trigger: GAGAGCCAGAAGGCGAATCAATGCGCAGTGCTCATC...ATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCTGTTTTTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp GAGCACCTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGGAATGTGGCAGGGATGTCTTGACTTaGCTGAACACGAGAGTCTTA +
Preference number: 5 (lower is better)
Translates to: EHLSNRRTIKKLTNEECGRDVLT*LNTRVL
Trigger: TAAGACTCTCGTGTTCAGCAAAGTCAAGACATCCCT...GCCACATTCCTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp TCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGAAGCCAAGGGATGTCTaGACTTTGCTGAACACGAGA +
Preference number: 5 (lower is better)
Translates to: SSREHLSNRRTIKKLTNEKPRDV*TLLNTR
Trigger: TCTCGTGTTCAGCAAAGTCAAGACATCCCTTGGCTT...CTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp CTTCTCCAAGATGACCCACTTTTCAATCCTCTGTGCATTGTTCATGGCTTCCTGAAGCCAAGGGATGTCTaGACTTTGCTGAACACGAGA +
Preference number: 5 (lower is better)
Translates to: LLQDDPLFNPLCIVHGFLKPRDV*TLLNTR
Trigger: TCTCGTGTTCAGCAAAGTCAAGACATCCCTTGGCTT...CAGGAAGCCATGAACAATGCACAGAGGATTGAAAAGTGGGTCATCTTGGAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681479.1
CDS-3UTR CAA 90 bp TGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTATTGCTTTGTCGGCAGTCTCTTGGTaGAGGGGCGCAGTCCCACTG +
Preference number: 5 (lower is better)
Translates to: WSHDLKVLRKIYSDFIALSAVSW*RGAVPL
Trigger: CAGTGGGACTGCGCCCCTCAACCAAGAGACTGCCGA...CAAAGCAATAAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp TGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTATTGCTTTGGAACTCGGCAGTCTCTaGGTTGAGGGGCGCAGTCCC +
Preference number: 5 (lower is better)
Translates to: WSHDLKVLRKIYSDFIALELGSL*VEGRSP
Trigger: GGGACTGCGCCCCTCAACCAAGAGACTGCCGAGTTC...CAAAGCAATAAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp AGGCTTCCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTTCCTGGTTCACAGCATaGATGCCTTGCTGGATGGCC +
Preference number: 5 (lower is better)
Translates to: RLPWSHDLKVLRKIYSDFSWFTA*MPCWMA
Trigger: GGCCATCCAGCAAGGCATCAATGCTGTGAACCAGGA...AAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCAGGGAAGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp CTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTCAATCCTCTGTGCATaGTTCATGGCTTCCTGGTTC +
Preference number: 5 (lower is better)
Translates to: LYYQDLLEGFPSCFQAGESILCA*FMASWF
Trigger: GAACCAGGAAGCCATGAACAATGCACAGAGGATTGA...CTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CAA 90 bp TCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGTCAATCCTCTGTGCATaGTTCATGGCTTCCTGGTTC +
Preference number: 5 (lower is better)
Translates to: SSREHLSNRRTIKKLTNESILCA*FMASWF
Trigger: GAACCAGGAAGCCATGAACAATGCACAGAGGATTGA...CTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp GTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGAAACCCCTGGAGTCATGACTaGAAGGTCCTTAGAAAGATA +
Preference number: 5 (lower is better)
Translates to: VWQVLLGSTSPTDEQSRNPWSHD*KVLRKI
Trigger: TATCTTTCTAAGGACCTTCAAGTCATGACTCCAGGG...GTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS TCA 90 bp AAGAGTACAAGTTGTTGTTCTTCTTCATTGGCAGTCTGTACTGGATaGTCGCTTTTAGGGGCTCTAGGCTGCTCTGTGGAATCGAAAGGA +
Preference number: 5 (lower is better)
Translates to: KSTSCCSSSLAVCTG*SLLGALGCSVESKG
Trigger: TCCTTTCGATTCCACAGAGCAGCCTAGAGCCCCTAAAAGCGATCATCCAGTACAGACTGCCAATGAAGAAGAACAACAACTTGTACTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000587227.1
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681525.1
CDS-3UTR CAA 90 bp TCCCAAGAGTACAAGTTGTTGTTCTTCTTCATTGGCAGTCTGTACTGGATGATCCTCCTTCTTGAGTCTTaGGGGTTCCAGTCATTCCAG +
Preference number: 5 (lower is better)
Translates to: SQEYKLLFFFIGSLYWMILLLES*GFQSFQ
Trigger: CTGGAATGACTGGAACCCCAAAGACTCAAGAAGGAG...GATCATCCAGTACAGACTGCCAATGAAGAAGAACAACAACTTGTACTCTTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR CAA 90 bp AGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATGAGGTCTTCATCTTTAGCTCCTTCTaGAGTCTTTGGGGTTCCAGT +
Preference number: 5 (lower is better)
Translates to: SRESFYLEQHFTYCNEVFIFSSF*SLWGSS
Trigger: ACTGGAACCCCAAAGACTCAAGAAGGAGCTAAAGAT...GAAGACCTCATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp AGTGCTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGAGAATTTCCCACTTTTaGCCATTCTTGGATGCGAGG +
Preference number: 5 (lower is better)
Translates to: SALLSGLIGRVSQLLPGRRISHF*PFLDAR
Trigger: CCTCGCATCCAAGAATGGCAAAAAGTGGGAAATTCT...CCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CAA 90 bp CCAATGCCATCCTTGTTCTGCTGGAACAGCATATTCTTACACCCAGTCAAGATCAGAATTTCCCACTTTTaGCCATTCTTGGATGCGAGG +
Preference number: 5 (lower is better)
Translates to: PMPSLFCWNSIFLHPVKIRISHF*PFLDAR
Trigger: CCTCGCATCCAAGAATGGCAAAAAGTGGGAAATTCT...GATCTTGACTGGGTGTAAGAATATGCTGTTCCAGCAGAACAAGGATGGCATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681479.1
CDS-3UTR CAA 90 bp AAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGATGAGTGATGACATATaGACAAACCTCGGCAGAGTT +
Preference number: 5 (lower is better)
Translates to: KRMAGSSREHLSNRRTIKMSDDI*TNLGRV
Trigger: AACTCTGCCGAGGTTTGTCAATATGTCATCACTCAT...CTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681525.1
CDS-3UTR CAA 90 bp ATATACAGTGATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACGATGAGCACTGCGCATaGATTCGCCTTCTGGCTCTC +
Preference number: 5 (lower is better)
Translates to: IYSDFIALKRMAGSSREHDEHCA*IRLLAL
Trigger: GAGAGCCAGAAGGCGAATCAATGCGCAGTGCTCATC...GTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATCACTGTATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp AAGATATACAGTGATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCTGAGCATCACTCCCTaGGGTATGCCTGTGGTCCCT +
Preference number: 5 (lower is better)
Translates to: KIYSDFIALKRMAGSSRELSITP*GMPVVP
Trigger: AGGGACCACAGGCATACCCAAGGGAGTGATGCTCAG...CTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATCACTGTATATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp GAGCACCTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGGAATGTGGCTATCTTCTCCCAAATTaGAGGCACTCCAATGAAGAC +
Preference number: 5 (lower is better)
Translates to: EHLSNRRTIKKLTNEECGYLLPN*RHSNED
Trigger: GTCTTCATTGGAGTGCCTCAAATTTGGGAGAAGATA...GCCACATTCCTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp AGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGTTCAAGCCCATGGACTaGGCACTATTTTTCTTCACC +
Preference number: 5 (lower is better)
Translates to: SRLPNRLPWSHDLKVLRKFKPMD*ALFFFT
Trigger: GGTGAAGAAAAATAGTGCCAAGTCCATGGGCTTGAA...CTTTCTAAGGACCTTCAAGTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp AACAGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATGAGGTCTTCAAGCCCATGGACTaGGCACTATTTTTCTTCACC +
Preference number: 5 (lower is better)
Translates to: NSRESFYLEQHFTYCNEVFKPMD*ALFFFT
Trigger: GGTGAAGAAAAATAGTGCCAAGTCCATGGGCTTGAA...GACCTCATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp AGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATGAGGTCTTCTTCAAGCCCATGGACTaGGCACTATTTTTCTTCACC +
Preference number: 5 (lower is better)
Translates to: SRESFYLEQHFTYCNEVFFKPMD*ALFFFT
Trigger: GGTGAAGAAAAATAGTGCCAAGTCCATGGGCTTGAA...GAAGACCTCATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp TATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTAGGGATGTCTTGACTTaGCTGAACACGAGAGTCTTA +
Preference number: 5 (lower is better)
Translates to: YQDLLEGFPSCFQAGELIRDVLT*LNTRVL
Trigger: TAAGACTCTCGTGTTCAGCAAAGTCAAGACATCCCT...AATCAACTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CAA 90 bp AGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATGAGGTCTTCAGGGATGTCTTGACTTaGCTGAACACGAGAGTCTTA +
Preference number: 5 (lower is better)
Translates to: SRESFYLEQHFTYCNEVFRDVLT*LNTRVL
Trigger: TAAGACTCTCGTGTTCAGCAAAGTCAAGACATCCCT...GAAGACCTCATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp CTTAAAAACAGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATCACCCAGTCAAGATCTaGCCACAGCTTAGAAGCCTG +
Preference number: 5 (lower is better)
Translates to: LKNSRESFYLEQHFTYCNHPVKI*PQLRSL
Trigger: CAGGCTTCTAAGCTGTGGCAAGATCTTGACTGGGTG...ATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCTGTTTTTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp ATCATCCCAAGAGTACAAGTTGTTGTTCTTCTTCATTGGCAGTCTGTACTGGATCACAGCATTGATGCCTaGCTGGATGGCCTTGTAGAC +
Preference number: 5 (lower is better)
Translates to: IIPRVQVVVLLHWQSVLDHSIDA*LDGLVD
Trigger: GTCTACAAGGCCATCCAGCAAGGCATCAATGCTGTG...ATCCAGTACAGACTGCCAATGAAGAAGAACAACAACTTGTACTCTTGGGATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681479.1
CDS-3UTR CAA 90 bp GATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACTCAATCCTCTGTGCATaGTTCATGGCTTCCTGGTTC +
Preference number: 5 (lower is better)
Translates to: DFIALKRMAGSSREHLSNSILCA*FMASWF
Trigger: GAACCAGGAAGCCATGAACAATGCACAGAGGATTGA...GTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp CTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGCCCTGGAGTCATGACTaGAAGGTCCTTAGAAAGATA +
Preference number: 5 (lower is better)
Translates to: LYYQDLLEGFPSCFQAGEPWSHD*KVLRKI
Trigger: TATCTTTCTAAGGACCTTCAAGTCATGACTCCAGGG...CTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CAA 90 bp GTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGACGAACAATCAAGAAACTATTATCAGGACTTATaGGAAGGGTTTCCCAGTTGC +
Preference number: 5 (lower is better)
Translates to: VWQVLLGSTSPTDEQSRNYYQDL*EGFPSC
Trigger: GCAACTGGGAAACCCTTCCAATAAGTCCTGATAATA...GTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS TCA 90 bp AAGAGTACAAGTTGTTGTTCTTCTTCATTGGCAGTCTGTACTGGATaGTCGCTTTTAGGGGCTCTAGGCTGCTCTGTGGAATTCCAAATG +
Preference number: 5 (lower is better)
Translates to: KSTSCCSSSLAVCTG*SLLGALGCSVEFQM
Trigger: CATTTGGAATTCCACAGAGCAGCCTAGAGCCCCTAAAAGCGATCATCCAGTACAGACTGCCAATGAAGAAGAACAACAACTTGTACTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585526.5
CDS CCA 90 bp TTTATTCATGTCTACTTCAAGATCTTTAGCTCCTTCTTGAGTCTTTaGGGTTCCAGTCATTCCAGGTGTGCAGAAACCATGCTCCACAGC +
Preference number: 5 (lower is better)
Translates to: FIHVYFKIFSSFLSL*GSSHSRCAETMLHS
Trigger: GCTGTGGAGCATGGTTTCTGCACACCTGGAATGACTGGAACCCCAAAGACTCAAGAAGGAGCTAAAGATCTTGAAGTAGACATGAATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000586696.5
ENST00000587617.1
ENST00000588304.5
ENST00000588485.6
ENST00000588722.5
ENST00000589401.5
ENST00000591403.5
ENST00000591738.5
ENST00000592677.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp GTAAATCAGGCAGTTTTTAGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACAGAATTTCCCACTTTTaGCCATTCTTGGATGCGAGG +
Preference number: 5 (lower is better)
Translates to: VNQAVFSRLPNRLPWSHDRISHF*PFLDAR
Trigger: CCTCGCATCCAAGAATGGCAAAAAGTGGGAAATTCT...GTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACTAAAAACTGCCTGATTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp TTGGGTGTCAGGGATACTTCTGCCAAGTTCCATGAAATCATCCCAAGAGTACAAAGAATTTCCCACTTTTaGCCATTCTTGGATGCGAGG +
Preference number: 5 (lower is better)
Translates to: LGVRDTSAKFHEIIPRVQRISHF*PFLDAR
Trigger: CCTCGCATCCAAGAATGGCAAAAAGTGGGAAATTCT...TTGTACTCTTGGGATGATTTCATGGAACTTGGCAGAAGTATCCCTGACACCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR CAA 90 bp CTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCAGGTGAGATGAGTGATGACATATaGACAAACCTCGGCAGAGTT +
Preference number: 5 (lower is better)
Translates to: LYYQDLLEGFPSCFQAGEMSDDI*TNLGRV
Trigger: AACTCTGCCGAGGTTTGTCAATATGTCATCACTCAT...CTCACCTGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
CDS-3UTR CAA 90 bp TTTCCCAGTTGCTTCCAGGCAGGTGAGTTGATTTGGGGGTCCAGTTCTTCAAATCAAGAGTACAAGTTGTaGTTCTTCTTCATTGGCAGT +
Preference number: 5 (lower is better)
Translates to: FPSCFQAGELIWGSSSSNQEYKL*FFFIGS
Trigger: ACTGCCAATGAAGAAGAACAACAACTTGTACTCTTG...ATTTGAAGAACTGGACCCCCAAATCAACTCACCTGCCTGGAAGCAACTGGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CAA 90 bp CTCCAGTTGGGTGTCAGGGATACTTCTGCCAAGTTCCATGAAATCATCCCAAGACAAGAGTACAAGTTGTaGTTCTTCTTCATTGGCAGT +
Preference number: 5 (lower is better)
Translates to: LQLGVRDTSAKFHEIIPRQEYKL*FFFIGS
Trigger: ACTGCCAATGAAGAAGAACAACAACTTGTACTCTTG...TCTTGGGATGATTTCATGGAACTTGGCAGAAGTATCCCTGACACCCAACTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR CAA 90 bp CCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTATTGCTGATGACCTGCTCCAGTaGGGTGTCAGGGATACTTCT +
Preference number: 5 (lower is better)
Translates to: PWSHDLKVLRKIYSDFIADDLLQ*GVRDTS
Trigger: AGAAGTATCCCTGACACCCAACTGGAGCAGGTCATC...AGCAATAAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp ATATACAGTGATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACGATGACCTGCTCCAGTaGGGTGTCAGGGATACTTCT +
Preference number: 5 (lower is better)
Translates to: IYSDFIALKRMAGSSREHDDLLQ*GVRDTS
Trigger: AGAAGTATCCCTGACACCCAACTGGAGCAGGTCATC...GTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATCACTGTATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp AACAGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATGAGGTCTATCTTCTCCCAAATTaGAGGCACTCCAATGAAGAC +
Preference number: 5 (lower is better)
Translates to: NSRESFYLEQHFTYCNEVYLLPN*RHSNED
Trigger: GTCTTCATTGGAGTGCCTCAAATTTGGGAGAAGATA...GACCTCATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp GAACAGCTGAGAGCAGCTCCATCAAAGCAGTCAGTGGTACATGTGATCAATTTGTATCTTCTCCCAAATTaGAGGCACTCCAATGAAGAC +
Preference number: 5 (lower is better)
Translates to: EQLRAAPSKQSVVHVINLYLLPN*RHSNED
Trigger: GTCTTCATTGGAGTGCCTCAAATTTGGGAGAAGATA...CAAATTGATCACATGTACCACTGACTGCTTTGATGGAGCTGCTCTCAGCTGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681479.1
CDS-3UTR CAA 90 bp CTGAAGTGCTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGTTCAAGCCCATGGACTaGGCACTATTTTTCTTCACC +
Preference number: 5 (lower is better)
Translates to: LKCFIIRTYWKGFPVASRFKPMD*ALFFFT
Trigger: GGTGAAGAAAAATAGTGCCAAGTCCATGGGCTTGAA...CCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAGCACTTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CAA 90 bp GTAAATCAGGCAGTTTTTAGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACAGGGATGTCTTGACTTaGCTGAACACGAGAGTCTTA +
Preference number: 5 (lower is better)
Translates to: VNQAVFSRLPNRLPWSHDRDVLT*LNTRVL
Trigger: TAAGACTCTCGTGTTCAGCAAAGTCAAGACATCCCT...GTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACTAAAAACTGCCTGATTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp CTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGGAATGTGGCTTCTTAAAGCCAAGGGATGTCTaGACTTTGCTGAACACGAGA +
Preference number: 5 (lower is better)
Translates to: LSNRRTIKKLTNEECGFLKPRDV*TLLNTR
Trigger: TCTCGTGTTCAGCAAAGTCAAGACATCCCTTGGCTT...TAAGAAGCCACATTCCTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp ATATACAGTGATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACCACAGCATTGATGCCTaGCTGGATGGCCTTGTAGAC +
Preference number: 5 (lower is better)
Translates to: IYSDFIALKRMAGSSREHHSIDA*LDGLVD
Trigger: GTCTACAAGGCCATCCAGCAAGGCATCAATGCTGTG...GTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATCACTGTATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp AACAGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATGAGGTCTATTATCAGGACTTATaGGAAGGGTTTCCCAGTTGC +
Preference number: 5 (lower is better)
Translates to: NSRESFYLEQHFTYCNEVYYQDL*EGFPSC
Trigger: GCAACTGGGAAACCCTTCCAATAAGTCCTGATAATA...GACCTCATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CAA 90 bp ATATACAGTGATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACCTCCTTCTTGAGTCTTaGGGGTTCCAGTCATTCCAG +
Preference number: 5 (lower is better)
Translates to: IYSDFIALKRMAGSSREHLLLES*GFQSFQ
Trigger: CTGGAATGACTGGAACCCCAAAGACTCAAGAAGGAG...GTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATCACTGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp AGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGCAAGAGTACAAGTTGTaGTTCTTCTTCATTGGCAGT +
Preference number: 5 (lower is better)
Translates to: SRLPNRLPWSHDLKVLRKQEYKL*FFFIGS
Trigger: ACTGCCAATGAAGAAGAACAACAACTTGTACTCTTG...CTTTCTAAGGACCTTCAAGTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp TTTCATTTGTTCATTTCTTATCTGTTCCCAAGGTCCAGATTGAGTCTGTCTTGTGATGACCTGCTCCAGTaGGGTGTCAGGGATACTTCT +
Preference number: 5 (lower is better)
Translates to: FHLFISYLFPRSRLSLSCDDLLQ*GVRDTS
Trigger: AGAAGTATCCCTGACACCCAACTGGAGCAGGTCATC...ACAAGACAGACTCAATCTGGACCTTGGGAACAGATAAGAAATGAACAAATGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587227.1
CDS-3UTR CAA 90 bp AGGCTTCCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTAAGCCAAGGGATGTCTaGACTTTGCTGAACACGAGA +
Preference number: 5 (lower is better)
Translates to: RLPWSHDLKVLRKIYSDFKPRDV*TLLNTR
Trigger: TCTCGTGTTCAGCAAAGTCAAGACATCCCTTGGCTT...AAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCAGGGAAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp AAGATATACAGTGATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACCCAGTCAAGATCTaGCCACAGCTTAGAAGCCTG +
Preference number: 5 (lower is better)
Translates to: KIYSDFIALKRMAGSSREHPVKI*PQLRSL
Trigger: CAGGCTTCTAAGCTGTGGCAAGATCTTGACTGGGTG...CTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATCACTGTATATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp CCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTATTGCTTCCCCAATGCCATCCTaGTTCTGCTGGAACAGCATA +
Preference number: 5 (lower is better)
Translates to: PWSHDLKVLRKIYSDFIASPMPS*FCWNSI
Trigger: TATGCTGTTCCAGCAGAACAAGGATGGCATTGGGGA...AGCAATAAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp ATATACAGTGATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACTCCCCAATGCCATCCTaGTTCTGCTGGAACAGCATA +
Preference number: 5 (lower is better)
Translates to: IYSDFIALKRMAGSSREHSPMPS*FCWNSI
Trigger: TATGCTGTTCCAGCAGAACAAGGATGGCATTGGGGA...GTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATCACTGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp AAGATATACAGTGATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGGTAGACCAGGGGGTCTaGCTGCTTCACAATCTCAGT +
Preference number: 5 (lower is better)
Translates to: KIYSDFIALKRMAGSSREVDQGV*LLHNLS
Trigger: ACTGAGATTGTGAAGCAGCAAGACCCCCTGGTCTAC...CTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATCACTGTATATCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp AGGCTTCCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTTCAATCCTCTGTGCATaGTTCATGGCTTCCTGGTTC +
Preference number: 5 (lower is better)
Translates to: RLPWSHDLKVLRKIYSDFSILCA*FMASWF
Trigger: GAACCAGGAAGCCATGAACAATGCACAGAGGATTGA...AAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCAGGGAAGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp ATCATCCCAAGAGTACAAGTTGTTGTTCTTCTTCATTGGCAGTCTGTACTGGATTCAATCCTCTGTGCATaGTTCATGGCTTCCTGGTTC +
Preference number: 5 (lower is better)
Translates to: IIPRVQVVVLLHWQSVLDSILCA*FMASWF
Trigger: GAACCAGGAAGCCATGAACAATGCACAGAGGATTGA...ATCCAGTACAGACTGCCAATGAAGAAGAACAACAACTTGTACTCTTGGGATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681479.1
CDS-3UTR CAA 90 bp GAGCACCTCTCCAACAGACGAACAATCAAGAAACTGACCAATGAGGAATGTGGCAGTGATTTTATTGCTTaGAAACGTATGGCAGGTTCT +
Preference number: 5 (lower is better)
Translates to: EHLSNRRTIKKLTNEECGSDFIA*KRMAGS
Trigger: AGAACCTGCCATACGTTTCAAAGCAATAAAATCACT...GCCACATTCCTCATTGGTCAGTTTCTTGATTGTTCGTCTGTTGGAGAGGTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp CTGAAGTGCTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGTATTATCAGGACTTATaGGAAGGGTTTCCCAGTTGC +
Preference number: 5 (lower is better)
Translates to: LKCFIIRTYWKGFPVASRYYQDL*EGFPSC
Trigger: GCAACTGGGAAACCCTTCCAATAAGTCCTGATAATA...CCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAGCACTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CAA 90 bp TTGTTCATTTCTTATCTGTTCCCAAGGTCCAGATTGAGTCTGTCTTGTTTGCTGCAGATTGAGTCTGTCTaGTTTGCTGCTGTTTCCCCT +
Preference number: 5 (lower is better)
Translates to: LFISYLFPRSRLSLSCLLQIESV*FAAVSP
Trigger: AGGGGAAACAGCAGCAAACAAGACAGACTCAATCTG...CAGCAAACAAGACAGACTCAATCTGGACCTTGGGAACAGATAAGAAATGAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587227.1
CDS-3UTR CAA 90 bp CTTAAAAACAGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATATCTTTAGCTCCTTCTaGAGTCTTTGGGGTTCCAGT +
Preference number: 5 (lower is better)
Translates to: LKNSRESFYLEQHFTYCNIFSSF*SLWGSS
Trigger: ACTGGAACCCCAAAGACTCAAGAAGGAGCTAAAGAT...ATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCTGTTTTTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp GAAGTGCTTTATTATCAGGACTTATTGGAAGGGTTTCCCAGTTGCTTCCAGGCACAAGAGTACAAGTTGTaGTTCTTCTTCATTGGCAGT +
Preference number: 5 (lower is better)
Translates to: EVLYYQDLLEGFPSCFQAQEYKL*FFFIGS
Trigger: ACTGCCAATGAAGAAGAACAACAACTTGTACTCTTG...TGCCTGGAAGCAACTGGGAAACCCTTCCAATAAGTCCTGATAATAAAGCACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CAA 90 bp TTGGGTGTCAGGGATACTTCTGCCAAGTTCCATGAAATCATCCCAAGAGTACAACAAGAGTACAAGTTGTaGTTCTTCTTCATTGGCAGT +
Preference number: 5 (lower is better)
Translates to: LGVRDTSAKFHEIIPRVQQEYKL*FFFIGS
Trigger: ACTGCCAATGAAGAAGAACAACAACTTGTACTCTTG...TTGTACTCTTGGGATGATTTCATGGAACTTGGCAGAAGTATCCCTGACACCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587617.1
ENST00000592677.5
ENST00000681479.1
CDS-3UTR CAA 90 bp GTAAATCAGGCAGTTTTTAGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACCAAGAGTACAAGTTGTaGTTCTTCTTCATTGGCAGT +
Preference number: 5 (lower is better)
Translates to: VNQAVFSRLPNRLPWSHDQEYKL*FFFIGS
Trigger: ACTGCCAATGAAGAAGAACAACAACTTGTACTCTTG...GTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACTAAAAACTGCCTGATTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp TGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTATTGCTTTGGATGACCTGCTCCAGTaGGGTGTCAGGGATACTTCT +
Preference number: 5 (lower is better)
Translates to: WSHDLKVLRKIYSDFIALDDLLQ*GVRDTS
Trigger: AGAAGTATCCCTGACACCCAACTGGAGCAGGTCATC...CAAAGCAATAAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp TGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTATTGCTTTGCACCCAGTCAAGATCTaGCCACAGCTTAGAAGCCTG +
Preference number: 5 (lower is better)
Translates to: WSHDLKVLRKIYSDFIALHPVKI*PQLRSL
Trigger: CAGGCTTCTAAGCTGTGGCAAGATCTTGACTGGGTG...CAAAGCAATAAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp AGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGAGTGATTTTATTGCTTaGAAACGTATGGCAGGTTCT +
Preference number: 5 (lower is better)
Translates to: SRLPNRLPWSHDLKVLRKSDFIA*KRMAGS
Trigger: AGAACCTGCCATACGTTTCAAAGCAATAAAATCACT...CTTTCTAAGGACCTTCAAGTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp TTTCTTGTAAATCAGGCAGTTTTTAGTAGACTTCCCAATAGGCTTCCCTGGAGTCCCTGGAGTCATGACTaGAAGGTCCTTAGAAAGATA +
Preference number: 5 (lower is better)
Translates to: FLVNQAVFSRLPNRLPWSPWSHD*KVLRKI
Trigger: TATCTTTCTAAGGACCTTCAAGTCATGACTCCAGGG...ACTCCAGGGAAGCCTATTGGGAAGTCTACTAAAAACTGCCTGATTTACAAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp TTGTTCATTTCTTATCTGTTCCCAAGGTCCAGATTGAGTCTGTCTTGTTTGCTGATGAGTGATGACATATaGACAAACCTCGGCAGAGTT +
Preference number: 5 (lower is better)
Translates to: LFISYLFPRSRLSLSCLLMSDDI*TNLGRV
Trigger: AACTCTGCCGAGGTTTGTCAATATGTCATCACTCAT...CAGCAAACAAGACAGACTCAATCTGGACCTTGGGAACAGATAAGAAATGAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587227.1
CDS-3UTR CAA 90 bp GTAAATCAGGCAGTTTTTAGTAGACTTCCCAATAGGCTTCCCTGGAGTCATGACAGTGATTTTATTGCTTaGAAACGTATGGCAGGTTCT +
Preference number: 5 (lower is better)
Translates to: VNQAVFSRLPNRLPWSHDSDFIA*KRMAGS
Trigger: AGAACCTGCCATACGTTTCAAAGCAATAAAATCACT...GTCATGACTCCAGGGAAGCCTATTGGGAAGTCTACTAAAAACTGCCTGATTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp TTGGGTGTCAGGGATACTTCTGCCAAGTTCCATGAAATCATCCCAAGAGTACAAAGTGATTTTATTGCTTaGAAACGTATGGCAGGTTCT +
Preference number: 5 (lower is better)
Translates to: LGVRDTSAKFHEIIPRVQSDFIA*KRMAGS
Trigger: AGAACCTGCCATACGTTTCAAAGCAATAAAATCACT...TTGTACTCTTGGGATGATTTCATGGAACTTGGCAGAAGTATCCCTGACACCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681479.1
CDS-3UTR CAA 90 bp GATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCACCTCTCCAACAGTGATTTTATTGCTTaGAAACGTATGGCAGGTTCT +
Preference number: 5 (lower is better)
Translates to: DFIALKRMAGSSREHLSNSDFIA*KRMAGS
Trigger: AGAACCTGCCATACGTTTCAAAGCAATAAAATCACT...GTTGGAGAGGTGCTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp AAGATATACAGTGATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGATCTTTAGCTCCTTCTaGAGTCTTTGGGGTTCCAGT +
Preference number: 5 (lower is better)
Translates to: KIYSDFIALKRMAGSSREIFSSF*SLWGSS
Trigger: ACTGGAACCCCAAAGACTCAAGAAGGAGCTAAAGAT...CTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATCACTGTATATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp TTGTTCATTTCTTATCTGTTCCCAAGGTCCAGATTGAGTCTGTCTTGTTTGCTGCAAGAGTACAAGTTGTaGTTCTTCTTCATTGGCAGT +
Preference number: 5 (lower is better)
Translates to: LFISYLFPRSRLSLSCLLQEYKL*FFFIGS
Trigger: ACTGCCAATGAAGAAGAACAACAACTTGTACTCTTG...CAGCAAACAAGACAGACTCAATCTGGACCTTGGGAACAGATAAGAAATGAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587227.1
CDS-3UTR CAA 90 bp TTTCTTGTAAATCAGGCAGTTTTTAGTAGACTTCCCAATAGGCTTCCCTGGAGTCAAGAGTACAAGTTGTaGTTCTTCTTCATTGGCAGT +
Preference number: 5 (lower is better)
Translates to: FLVNQAVFSRLPNRLPWSQEYKL*FFFIGS
Trigger: ACTGCCAATGAAGAAGAACAACAACTTGTACTCTTG...ACTCCAGGGAAGCCTATTGGGAAGTCTACTAAAAACTGCCTGATTTACAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp CTTAAAAACAGCAGGGAGAGCTTCTACCTAGAGCAGCATTTCACTTATTGCAATCAAGAGTACAAGTTGTaGTTCTTCTTCATTGGCAGT +
Preference number: 5 (lower is better)
Translates to: LKNSRESFYLEQHFTYCNQEYKL*FFFIGS
Trigger: ACTGCCAATGAAGAAGAACAACAACTTGTACTCTTG...ATTGCAATAAGTGAAATGCTGCTCTAGGTAGAAGCTCTCCCTGCTGTTTTTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp CCCTGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTATTGCTTATCTTCTCCCAAATTaGAGGCACTCCAATGAAGAC +
Preference number: 5 (lower is better)
Translates to: PWSHDLKVLRKIYSDFIAYLLPN*RHSNED
Trigger: GTCTTCATTGGAGTGCCTCAAATTTGGGAGAAGATA...AGCAATAAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp AAGATATACAGTGATTTTATTGCTTTGAAACGTATGGCAGGTTCTTCTAGGGAGCCCTGGAGTCATGACTaGAAGGTCCTTAGAAAGATA +
Preference number: 5 (lower is better)
Translates to: KIYSDFIALKRMAGSSREPWSHD*KVLRKI
Trigger: TATCTTTCTAAGGACCTTCAAGTCATGACTCCAGGG...CTCCCTAGAAGAACCTGCCATACGTTTCAAAGCAATAAAATCACTGTATATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp TGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTATTGCTTTGATCTTTAGCTCCTTCTaGAGTCTTTGGGGTTCCAGT +
Preference number: 5 (lower is better)
Translates to: WSHDLKVLRKIYSDFIALIFSSF*SLWGSS
Trigger: ACTGGAACCCCAAAGACTCAAGAAGGAGCTAAAGAT...CAAAGCAATAAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp TGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTATTGCTTTGAGAATTTCCCACTTTTaGCCATTCTTGGATGCGAGG +
Preference number: 5 (lower is better)
Translates to: WSHDLKVLRKIYSDFIALRISHF*PFLDAR
Trigger: CCTCGCATCCAAGAATGGCAAAAAGTGGGAAATTCT...CAAAGCAATAAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp TGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTATTGCTTTGTATCTTCTCCCAAATTaGAGGCACTCCAATGAAGAC +
Preference number: 5 (lower is better)
Translates to: WSHDLKVLRKIYSDFIALYLLPN*RHSNED
Trigger: GTCTTCATTGGAGTGCCTCAAATTTGGGAGAAGATA...CAAAGCAATAAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS-3UTR CAA 90 bp TGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTATTGCTTTGTATTATCAGGACTTATaGGAAGGGTTTCCCAGTTGC +
Preference number: 5 (lower is better)
Translates to: WSHDLKVLRKIYSDFIALYYQDL*EGFPSC
Trigger: GCAACTGGGAAACCCTTCCAATAAGTCCTGATAATA...CAAAGCAATAAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
CDS-3UTR CAA 90 bp TGGAGTCATGACTTGAAGGTCCTTAGAAAGATATACAGTGATTTTATTGCTTTGAGTGATTTTATTGCTTaGAAACGTATGGCAGGTTCT +
Preference number: 5 (lower is better)
Translates to: WSHDLKVLRKIYSDFIALSDFIA*KRMAGS
Trigger: AGAACCTGCCATACGTTTCAAAGCAATAAAATCACT...CAAAGCAATAAAATCACTGTATATCTTTCTAAGGACCTTCAAGTCATGACTCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000590132.1
ENST00000591403.5
ENST00000681479.1
ENST00000681525.1
CDS CCA 72 bp CGCCTGGCACTGGCACCTGTCACTCTTCAAGAGGTGTaGTTCTGGCCATCTGGCAAGGCACCTGGAGCTGGG +
Preference number: 6 (lower is better)
Translates to: RLALAPVTLQEV*FWPSGKAPGAG
Trigger: CCCAGCTCCAGGTGCCTTGCCAGATGGCCAGAACCACACCTCTTGAAGAGTGACAGGTGCCAGTGCCAGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589401.5
CDS GCA 72 bp GTCCTTCCTTGGGGCCTTCGTACGGGCTGTGCCCTCTaGCTGGAACTCTCTTCCCCTCAGATAGCTGGGACT +
Preference number: 6 (lower is better)
Translates to: VLPWGLRTGCAL*LELSSPQIAGT
Trigger: AGTCCCAGCTATCTGAGGGGAAGAGAGTTCCAGGCAGAGGGCACAGCCCGTACGAAGGCCCCAAGGAAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589401.5
CDS CCA 72 bp CACAGCACACTGGCACCTGTCACTCTTCAAGAGGTGTaGTTCTGGCCATCTGGCAAGGCACCTGGAGCTGGG +
Preference number: 6 (lower is better)
Translates to: HSTLAPVTLQEV*FWPSGKAPGAG
Trigger: CCCAGCTCCAGGTGCCTTGCCAGATGGCCAGAACCACACCTCTTGAAGAGTGACAGGTGCCAGTGTGCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586696.5
CDS CCA 72 bp ACCATGCTCCACAGCACTGTCACTCTTCAAGAGGTGTaGTTCTGGCCATCTGGCAAGGCACCTGGAGCTGGG +
Preference number: 6 (lower is better)
Translates to: TMLHSTVTLQEV*FWPSGKAPGAG
Trigger: CCCAGCTCCAGGTGCCTTGCCAGATGGCCAGAACCACACCTCTTGAAGAGTGACAGTGCTGTGGAGCATGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588304.5
ENST00000588485.6
ENST00000588722.5
ENST00000591738.5
ENST00000592677.5
ENST00000681479.1
ENST00000681525.1
CDS CCA 72 bp GCACTGGCACCTGTCACTCTTCAAGAGGTGTGGTTCTaGCCATCTGGCAAGGCACCTGGAGCTGGGACATCT +
Preference number: 6 (lower is better)
Translates to: ALAPVTLQEVWF*PSGKAPGAGTS
Trigger: AGATGTCCCAGCTCCAGGTGCCTTGCCAGATGGCCAGAACCACACCTCTTGAAGAGTGACAGGTGCCAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589401.5
CDS CCA 72 bp TGCCCTCTGCCTGGAACTCTCTTCCCCTCAGATAGCTaGGACTACAGAAGCATGCCACTACGCCTGGCACTG +
Preference number: 6 (lower is better)
Translates to: CPLPGTLFPSDS*DYRSMPLRLAL
Trigger: CAGTGCCAGGCGTAGTGGCATGCTTCTGTAGTCCCAGCTATCTGAGGGGAAGAGAGTTCCAGGCAGAGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589401.5
CDS CAA 90 bp CACAGCATTGATGCCTTGCTGGATGGCCTTGTAGACCAGGGGGTCTaGCTGCTTCACAATCTCAGTCACGGTGGATGCCTGGCTTCAGCG +
Preference number: 6 (lower is better)
Translates to: HSIDALLDGLVDQGV*LLHNLSHGGCLASA
Trigger: CGCTGAAGCCAGGCATCCACCGTGACTGAGATTGTGAAGCAGCAAGACCCCCTGGTCTACAAGGCCATCCAGCAAGGCATCAATGCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590132.1
CDS GCA 72 bp CTCTCTTCCCCTCAGATAGCTGGGACTACAGAAGCATaGCACTACGCCTGGCACTGGCACCTGTCACTCTTC +
Preference number: 6 (lower is better)
Translates to: LSSPQIAGTTEA*HYAWHWHLSLF
Trigger: GAAGAGTGACAGGTGCCAGTGCCAGGCGTAGTGGCATGCTTCTGTAGTCCCAGCTATCTGAGGGGAAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589401.5
CDS GCA 72 bp TTTGGGGTTCCAGTCATTCCAGGTGTGCAGAAACCATaGTCCACAGCACAGGTGCAGTCCTTCCTTGGGGCC +
Preference number: 6 (lower is better)
Translates to: FGVPVIPGVQKP*STAQVQSFLGA
Trigger: GGCCCCAAGGAAGGACTGCACCTGTGCTGTGGAGCATGGTTTCTGCACACCTGGAATGACTGGAACCCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589401.5
CDS CCA 72 bp CTCCACAGCACTGTCACTCTTCAAGAGGTGTGGTTCTaGCCATCTGGCAAGGCACCTGGAGCTGGGACATCT +
Preference number: 6 (lower is better)
Translates to: LHSTVTLQEVWF*PSGKAPGAGTS
Trigger: AGATGTCCCAGCTCCAGGTGCCTTGCCAGATGGCCAGAACCACACCTCTTGAAGAGTGACAGTGCTGTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588304.5
ENST00000588485.6
ENST00000588722.5
ENST00000591738.5
ENST00000592677.5
ENST00000681479.1
ENST00000681525.1
CDS CCA 72 bp GGATGGTCATCGGGGTCTCATGGCCTGGTCCGTGTTTaGATAGCCTCAGAAGGACTTCTCCATCTCGACAGG +
Preference number: 6 (lower is better)
Translates to: GWSSGSHGLVRV*IASEGLLHLDR
Trigger: CCTGTCGAGATGGAGAAGTCCTTCTGAGGCTATCCAAACACGGACCAGGCCATGAGACCCCGATGACCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000586696.5
ENST00000587617.1
ENST00000588304.5
ENST00000588485.6
ENST00000588722.5
ENST00000589401.5
ENST00000591403.5
ENST00000591738.5
ENST00000592677.5
ENST00000681479.1
ENST00000681525.1
CDS CCA 72 bp ACACTGGCACCTGTCACTCTTCAAGAGGTGTGGTTCTaGCCATCTGGCAAGGCACCTGGAGCTGGGACATCT +
Preference number: 6 (lower is better)
Translates to: TLAPVTLQEVWF*PSGKAPGAGTS
Trigger: AGATGTCCCAGCTCCAGGTGCCTTGCCAGATGGCCAGAACCACACCTCTTGAAGAGTGACAGGTGCCAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586696.5
CDS CAA 72 bp GGGATGGTCATCGGGGTCTCATGGCCTGGTCCGTGTTaGGATAGCCTCAGAAGGACTTCTCCATCTCGACAG +
Preference number: 6 (lower is better)
Translates to: GMVIGVSWPGPC*DSLRRTSPSRQ
Trigger: CTGTCGAGATGGAGAAGTCCTTCTGAGGCTATCCAAACACGGACCAGGCCATGAGACCCCGATGACCATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000586696.5
ENST00000587617.1
ENST00000588304.5
ENST00000588485.6
ENST00000588722.5
ENST00000589401.5
ENST00000591403.5
ENST00000591738.5
ENST00000592677.5
ENST00000681479.1
ENST00000681525.1
CDS CAA 90 bp CACAGCATTGATGCCTTGCTGGATGGCCTTGTAGACCAGGGGGTCTaGCTGCTTCACAATCTCAGTCACGGTGGATGCCTTCAGCGTCAG +
Preference number: 6 (lower is better)
Translates to: HSIDALLDGLVDQGV*LLHNLSHGGCLQRQ
Trigger: CTGACGCTGAAGGCATCCACCGTGACTGAGATTGTGAAGCAGCAAGACCCCCTGGTCTACAAGGCCATCCAGCAAGGCATCAATGCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681525.1
CDS CCA 72 bp CTGGCCATCTGGCAAGGCACCTGGAGCTGGGACATCTaGTCACTCAGGTGTTTTCTTCTTCCCCATTCAACC +
Preference number: 6 (lower is better)
Translates to: LAIWQGTWSWDI*SLRCFLLPHST
Trigger: GGTTGAATGGGGAAGAAGAAAACACCTGAGTGACCAGATGTCCCAGCTCCAGGTGCCTTGCCAGATGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588722.5
CDS CCA 72 bp CTGGCCATCTGGCAAGGCACCTGGAGCTGGGACATCTaGTCACTCAGGTGTTTTCTTCTTCCTTCCAGAACG +
Preference number: 6 (lower is better)
Translates to: LAIWQGTWSWDI*SLRCFLLPSRT
Trigger: CGTTCTGGAAGGAAGAAGAAAACACCTGAGTGACCAGATGTCCCAGCTCCAGGTGCCTTGCCAGATGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681479.1
CDS CAA 72 bp GATGCCTTGCTGGATGGCCTTGTAGACCAGGGGGTCTaGCTGCTTCACAATCTCAGTCACGGTGGATGCCTT +
Preference number: 6 (lower is better)
Translates to: DALLDGLVDQGV*LLHNLSHGGCL
Trigger: AAGGCATCCACCGTGACTGAGATTGTGAAGCAGCAAGACCCCCTGGTCTACAAGGCCATCCAGCAAGGCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681525.1
CDS TCA 72 bp TTCTTCTTCCATTGTGAAGAGAGCCCCAAGGCATGTTaGGGGCTTGATCAAAGGATCCCGCCCAGGCAGGGA +
Preference number: 6 (lower is better)
Translates to: FFFHCEESPKAC*GLDQRIPPRQG
Trigger: TCCCTGCCTGGGCGGGATCCTTTGATCAAGCCCTCAACATGCCTTGGGGCTCTCTTCACAATGGAAGAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591738.5
CDS GCA 72 bp CTTCTTGAGTCTTTGGGGTTCCAGTCATTCCAGGTGTaGAGAAACCATGCTCCACAGCACTGGAGCTGGGAC +
Preference number: 6 (lower is better)
Translates to: LLESLGFQSFQV*RNHAPQHWSWD
Trigger: GTCCCAGCTCCAGTGCTGTGGAGCATGGTTTCTGCACACCTGGAATGACTGGAACCCCAAAGACTCAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587617.1
ENST00000591403.5
CDS CAA 90 bp AAAAATTCAGGGATGGTCATCGGGGTCTCATGGCCTGGTCCGTGTTaGGATAGCCTCAGAAGGACTTCTCCATCTCGACAGGTGGTCCAC +
Preference number: 6 (lower is better)
Translates to: KNSGMVIGVSWPGPC*DSLRRTSPSRQVVH
Trigger: GTGGACCACCTGTCGAGATGGAGAAGTCCTTCTGAGGCTATCCAAACACGGACCAGGCCATGAGACCCCGATGACCATCCCTGAATTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000586696.5
ENST00000587617.1
ENST00000588304.5
ENST00000588485.6
ENST00000588722.5
ENST00000589401.5
ENST00000591403.5
ENST00000591738.5
ENST00000592677.5
ENST00000681479.1
ENST00000681525.1
CDS CAA 90 bp TTTTCTTCTTCCATTGTGAAGAGAGCCCCAAGGCATGTTGAGGGCTaGATCAAAGGATCCCGCCCAGGCAGGGAGTCTGGGAGTGGTTTC +
Preference number: 6 (lower is better)
Translates to: FSSSIVKRAPRHVEG*IKGSRPGRESGSGF
Trigger: GAAACCACTCCCAGACTCCCTGCCTGGGCGGGATCCTTTGATCAAGCCCTCAACATGCCTTGGGGCTCTCTTCACAATGGAAGAAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591738.5
CDS GCA 72 bp CTTCTTGAGTCTTTGGGGTTCCAGTCATTCCAGGTGTaGAGAAACCATGCTCCACAGCACAGGTGCAGTCCT +
Preference number: 6 (lower is better)
Translates to: LLESLGFQSFQV*RNHAPQHRCSP
Trigger: AGGACTGCACCTGTGCTGTGGAGCATGGTTTCTGCACACCTGGAATGACTGGAACCCCAAAGACTCAAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589401.5
CDS GCA 72 bp TTTGGGGTTCCAGTCATTCCAGGTGTGCAGAAACCATaGTCCACAGCACACTGGCACCTGTCACTCTTCAAG +
Preference number: 6 (lower is better)
Translates to: FGVPVIPGVQKP*STAHWHLSLFK
Trigger: CTTGAAGAGTGACAGGTGCCAGTGTGCTGTGGAGCATGGTTTCTGCACACCTGGAATGACTGGAACCCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586696.5
CDS GCA 72 bp CTTCTTGAGTCTTTGGGGTTCCAGTCATTCCAGGTGTaGAGAAACCATGCTCCACAGCACACTGGCACCTGT +
Preference number: 6 (lower is better)
Translates to: LLESLGFQSFQV*RNHAPQHTGTC
Trigger: ACAGGTGCCAGTGTGCTGTGGAGCATGGTTTCTGCACACCTGGAATGACTGGAACCCCAAAGACTCAAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586696.5
CDS GCA 72 bp TTTGGGGTTCCAGTCATTCCAGGTGTGCAGAAACCATaGTCCACAGCACTGTCACTCTTCAAGAGGTGTGGT +
Preference number: 6 (lower is better)
Translates to: FGVPVIPGVQKP*STALSLFKRCG
Trigger: ACCACACCTCTTGAAGAGTGACAGTGCTGTGGAGCATGGTTTCTGCACACCTGGAATGACTGGAACCCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000588304.5
ENST00000588485.6
ENST00000588722.5
ENST00000591738.5
ENST00000592677.5
ENST00000681479.1
ENST00000681525.1
CDS GCA 72 bp CTTCTTGAGTCTTTGGGGTTCCAGTCATTCCAGGTGTaGAGAAACCATGCTCCACAGCACTGTCACTCTTCA +
Preference number: 6 (lower is better)
Translates to: LLESLGFQSFQV*RNHAPQHCHSS
Trigger: TGAAGAGTGACAGTGCTGTGGAGCATGGTTTCTGCACACCTGGAATGACTGGAACCCCAAAGACTCAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000588304.5
ENST00000588485.6
ENST00000588722.5
ENST00000591738.5
ENST00000592677.5
ENST00000681479.1
ENST00000681525.1
CDS TCA 72 bp CCAGTTGGGTGTCAGGGATACTTCTGCCAAGTTCCATaGAATCATCCCACTCCCACTTTCTTTGAAAGGCCA +
Preference number: 6 (lower is better)
Translates to: PVGCQGYFCQVP*NHPTPTFFERP
Trigger: TGGCCTTTCAAAGAAAGTGGGAGTGGGATGATTTCATGGAACTTGGCAGAAGTATCCCTGACACCCAACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591741.5
CDS GCA 72 bp GTGGAAACGCTCCAAACCCAGCTTGATCAAGGATTTTaGAGCCTTCCGACAAGCCTCATAGTACTGGTTGAA +
Preference number: 6 (lower is better)
Translates to: VETLQTQLDQGF*SLPTSLIVLVE
Trigger: TTCAACCAGTACTATGAGGCTTGTCGGAAGGCTGCAAAATCCTTGATCAAGCTGGGTTTGGAGCGTTTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000586696.5
ENST00000587617.1
ENST00000588304.5
ENST00000588485.6
ENST00000588722.5
ENST00000591403.5
ENST00000591738.5
ENST00000592677.5
ENST00000681479.1
ENST00000681525.1
CDS GCA 72 bp AGTCACGGTGGATGCCTGGCTTCAGCGTCAGCAACATaGTCAGAAACTTCAGTTTATCTCCTACTAACATGG +
Preference number: 6 (lower is better)
Translates to: SHGGCLASASAT*SETSVYLLLTW
Trigger: CCATGTTAGTAGGAGATAAACTGAAGTTTCTGAGCATGTTGCTGACGCTGAAGCCAGGCATCCACCGTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590132.1
CDS CCA 72 bp CACTCTGCAGAGTTAAACCCCAGGATACCAACTCCGTaGAAACGCTCCAAACCCAGCTTGATCAAGGATTTT +
Preference number: 6 (lower is better)
Translates to: HSAELNPRIPTP*KRSKPSLIKDF
Trigger: AAAATCCTTGATCAAGCTGGGTTTGGAGCGTTTCCACGGAGTTGGTATCCTGGGGTTTAACTCTGCAGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000586696.5
ENST00000587617.1
ENST00000588304.5
ENST00000588485.6
ENST00000588722.5
ENST00000591403.5
ENST00000591738.5
ENST00000592677.5
ENST00000681479.1
ENST00000681525.1
CDS GCA 72 bp TCTCAGTCACGGTGGATGCCTTCAGCGTCAGCAACATaGTCAGAAACTTCAGTTTATCTCCTACTAACATGG +
Preference number: 6 (lower is better)
Translates to: SQSRWMPSASAT*SETSVYLLLTW
Trigger: CCATGTTAGTAGGAGATAAACTGAAGTTTCTGAGCATGTTGCTGACGCTGAAGGCATCCACCGTGACTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681525.1
CDS TCA 72 bp GAGGATGACAATAGTCTGCCCGAGACAACACATCTCTaGCCAAATTATGCTACACAGAATTGTGGATCTTGG +
Preference number: 6 (lower is better)
Translates to: EDDNSLPETTHL*PNYATQNCGSW
Trigger: CCAAGATCCACAATTCTGTGTAGCATAATTTGGTCAGAGATGTGTTGTCTCGGGCAGACTATTGTCATCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585526.5
CDS CAA 72 bp CAGCAAGATGTTCACTTTGGCATGAGTGATGACATATaGACAAACCTCGGCAGAGTTGGTGGCATAAATACC +
Preference number: 6 (lower is better)
Translates to: QQDVHFGMSDDI*TNLGRVGGINT
Trigger: GGTATTTATGCCACCAACTCTGCCGAGGTTTGTCAATATGTCATCACTCATGCCAAAGTGAACATCTTGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681525.1
CDS TCA 72 bp TTATTCATGTCTACTTCAAGATCTTTAGCTCCTTCTTaGGTCTTTGGGGTTCCAGTCATTCCAGGTGTGCAG +
Preference number: 6 (lower is better)
Translates to: LFMSTSRSLAPS*VFGVPVIPGVQ
Trigger: CTGCACACCTGGAATGACTGGAACCCCAAAGACTCAAGAAGGAGCTAAAGATCTTGAAGTAGACATGAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000586696.5
ENST00000587617.1
ENST00000588304.5
ENST00000588485.6
ENST00000588722.5
ENST00000589401.5
ENST00000591403.5
ENST00000591738.5
ENST00000592677.5
ENST00000681479.1
ENST00000681525.1
CDS CAA 90 bp ATTCTCAACCAGCAAGATGTTCACTTTGGCATGAGTGATGACATATaGACAAACCTCGGCAGAGTTGGTGGCATAAATACCAACACAAAG +
Preference number: 6 (lower is better)
Translates to: ILNQQDVHFGMSDDI*TNLGRVGGINTNTK
Trigger: CTTTGTGTTGGTATTTATGCCACCAACTCTGCCGAGGTTTGTCAATATGTCATCACTCATGCCAAAGTGAACATCTTGCTGGTTGAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586696.5
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681525.1
CDS CAA 90 bp GACAACACATCTCTGACCAAATTATGCTACACAGAATTGTGGATCTaGGTTGATGAGCTAAAAGAAGTCCCTCATGGCTCTTCCTTTTCC +
Preference number: 6 (lower is better)
Translates to: DNTSLTKLCYTELWI*VDELKEVPHGSSFS
Trigger: GGAAAAGGAAGAGCCATGAGGGACTTCTTTTAGCTCATCAACCAAGATCCACAATTCTGTGTAGCATAATTTGGTCAGAGATGTGTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585526.5
CDS TCA 72 bp ATTTTGCAGCCTTCCGACAAGCCTCATAGTACTGGTTaGAATTCAGAATTTCCCACTTTTTGCCATTCTTGG +
Preference number: 6 (lower is better)
Translates to: ILQPSDKPHSTG*NSEFPTFCHSW
Trigger: CCAAGAATGGCAAAAAGTGGGAAATTCTGAATTTCAACCAGTACTATGAGGCTTGTCGGAAGGCTGCAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000586696.5
ENST00000587617.1
ENST00000588304.5
ENST00000588485.6
ENST00000588722.5
ENST00000591403.5
ENST00000591738.5
ENST00000592677.5
ENST00000681479.1
ENST00000681525.1
CDS TCA 72 bp CTGCTCTGTGGAATCGAAAGGATTTTCTGTAACTGTTaGTCATTCTCAACCAGCAAGATGTTCACTTTGGCA +
Preference number: 6 (lower is better)
Translates to: LLCGIERIFCNC*SFSTSKMFTLA
Trigger: TGCCAAAGTGAACATCTTGCTGGTTGAGAATGATCAACAGTTACAGAAAATCCTTTCGATTCCACAGAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586696.5
ENST00000587227.1
ENST00000588304.5
ENST00000588485.6
ENST00000591403.5
ENST00000681525.1
CDS CAA 72 bp TTTATTCATGTCTACTTCAAGATCTTTAGCTCCTTCTaGAGTCTTTGGGGTTCCAGTCATTCCAGGTGTGCA +
Preference number: 6 (lower is better)
Translates to: FIHVYFKIFSSF*SLWGSSHSRCA
Trigger: TGCACACCTGGAATGACTGGAACCCCAAAGACTCAAGAAGGAGCTAAAGATCTTGAAGTAGACATGAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000586696.5
ENST00000587617.1
ENST00000588304.5
ENST00000588485.6
ENST00000588722.5
ENST00000589401.5
ENST00000591403.5
ENST00000591738.5
ENST00000592677.5
ENST00000681479.1
ENST00000681525.1
CDS CAA 72 bp TCTCTGACCAAATTATGCTACACAGAATTGTGGATCTaGGTTGATGAGCTAAAAGAAGTCCCTCATGGCTCT +
Preference number: 6 (lower is better)
Translates to: SLTKLCYTELWI*VDELKEVPHGS
Trigger: AGAGCCATGAGGGACTTCTTTTAGCTCATCAACCAAGATCCACAATTCTGTGTAGCATAATTTGGTCAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585526.5