RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ACSBG1 (Homo sapiens)

Ensembl gene IDs: ENSG00000103740

Ensembl transcript IDs: ENST00000258873.9, ENST00000557935.1, ENST00000558130.1, ENST00000558728.1, ENST00000558793.1, ENST00000558828.5, ENST00000559241.5, ENST00000559707.5, ENST00000559713.1, ENST00000560124.5, ENST00000560183.1, ENST00000560817.5

Found 644 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACATCCGATGCACAGTGTAGGGAAGCTGTGGGCAGCTGGGGTCTATaGGCAGGCGCACCCGCCCATCGGCCCGAGTCGTCCACAGCGCCT +
Preference number: 1 (lower is better)
Translates to: TSDAQCREAVGSWGL*AGAPAHRPESSTAP
Trigger: AGGCGCTGTGGACGACTCGGGCCGATGGGCGGGTGCGCCTGCGCATAGACCCCAGCTGCCCACAGCTTCCCTACACTGTGCATCGGATGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557935.1
3UTR CCA 90 bp CCTCGTAGAACATCCGATGCACAGTGTAGGGAAGCTGTGGGCAGCTaGGGTCTATGCGCAGGCGCACCCGCCCATCGGCCCGAGTCGTCC +
Preference number: 1 (lower is better)
Translates to: PRRTSDAQCREAVGS*GLCAGAPAHRPESS
Trigger: GGACGACTCGGGCCGATGGGCGGGTGCGCCTGCGCATAGACCCCAGCTGCCCACAGCTTCCCTACACTGTGCATCGGATGTTCTACGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557935.1
3UTR CCA 90 bp ATCCAGGGCCTCGTAGAACATCCGATGCACAGTGTAGGGAAGCTGTaGGCAGCTGGGGTCTATGCGCAGGCGCACCCGCCCATCGGCCCG +
Preference number: 1 (lower is better)
Translates to: IQGLVEHPMHSVGKL*AAGVYAQAHPPIGP
Trigger: CGGGCCGATGGGCGGGTGCGCCTGCGCATAGACCCCAGCTGCCCACAGCTTCCCTACACTGTGCATCGGATGTTCTACGAGGCCCTGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557935.1
3UTR TCA 90 bp TGGCCCACTTCTGGATGTGGTAGGGCCGGGCCGCCGCGTTCATGTTaGCCCTCCGGATCCCCTCTTCGATGGCCTGGTACACGGCCTCAT +
Preference number: 1 (lower is better)
Translates to: WPTSGCGRAGPPRSC*PSGSPLRWPGTRPH
Trigger: ATGAGGCCGTGTACCAGGCCATCGAAGAGGGGATCCGGAGGGTCAACATGAACGCGGCGGCCCGGCCCTACCACATCCAGAAGTGGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560124.5
3UTR TCA 90 bp ACCGACATGGCCCACAGCAGCATCTTTCGCCGGATGAAGCCAGACTaGGCCGCCACCTCCTGGATGCGCTCCATGATCTTCTCCCATACC +
Preference number: 1 (lower is better)
Translates to: TDMAHSSIFRRMKPD*AATSWMRSMIFSHT
Trigger: GGTATGGGAGAAGATCATGGAGCGCATCCAGGAGGTGGCGGCTCAGTCTGGCTTCATCCGGCGAAAGATGCTGCTGTGGGCCATGTCGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559707.5
ENST00000560124.5
3UTR CCA 90 bp TGGGACCCAACTCTCCACCCGAAATGGAGAAGTCTCTCTCGAGAATaGCCCACTTCTGGATGTGGTAGGGCCGGGCCGCCGCGTTCATGT +
Preference number: 1 (lower is better)
Translates to: WDPTLHPKWRSLSRE*PTSGCGRAGPPRSC
Trigger: ACATGAACGCGGCGGCCCGGCCCTACCACATCCAGAAGTGGGCCATTCTCGAGAGAGACTTCTCCATTTCGGGTGGAGAGTTGGGTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560124.5
3UTR CCA 90 bp GCCGCCGCGTTCATGTTGACCCTCCGGATCCCCTCTTCGATGGCCTaGTACACGGCCTCATCCTTCTTCTCTATGATCTCGGACACTGTG +
Preference number: 1 (lower is better)
Translates to: AAAFMLTLRIPSSMA*YTASSFFSMISDTV
Trigger: CACAGTGTCCGAGATCATAGAGAAGAAGGATGAGGCCGTGTACCAGGCCATCGAAGAGGGGATCCGGAGGGTCAACATGAACGCGGCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560124.5
3UTR CCA 90 bp GATGACATTGGCGCAGCAGTCATAAGCGATGTACTGGCAGGCCTCTaGGGAGCTGGTGGTGTAGATGCCAGTGACGATGCCACCTGCAAA +
Preference number: 1 (lower is better)
Translates to: DDIGAAVISDVLAGL*GAGGVDASDDATCK
Trigger: TTTGCAGGTGGCATCGTCACTGGCATCTACACCACCAGCTCCCCAGAGGCCTGCCAGTACATCGCTTATGACTGCTGCGCCAATGTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
3UTR TCA 90 bp GTCGGCGATGCCCGCCAAGATTCCAGAGTAAGTCAGGTCGCTAGGTaGGTTGTGACTGATTGCTTTTCCTGCAGCGCACGTGAGCAGTAT +
Preference number: 1 (lower is better)
Translates to: VGDARQDSRVSQVAR*VVTDCFSCSAREQY
Trigger: ATACTGCTCACGTGCGCTGCAGGAAAAGCAATCAGTCACAACTCACCTAGCGACCTGACTTACTCTGGAATCTTGGCGGGCATCGCCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
3UTR GCA 90 bp CAGATGCCTTCGGTCATTTTGGCTCAGCTTGCTACTGAGAATGGCTaGTTCCCGTATTCAGAATGGAAGTGGGGTGGTCTGGTGGCGACA +
Preference number: 1 (lower is better)
Translates to: QMPSVILAQLATENG*FPYSEWKWGGLVAT
Trigger: TGTCGCCACCAGACCACCCCACTTCCATTCTGAATACGGGAAGCAGCCATTCTCAGTAGCAAGCTGAGCCAAAATGACCGAAGGCATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258873.9
3UTR GCA 90 bp CGCATACAAGCGGATGTTGAGACCCAGGAAGAAGTGCTGTGTCTCTaGCATCATGGGGGCCGCTCCATAGAAGTTCTTTTGACACTTGGC +
Preference number: 1 (lower is better)
Translates to: RIQADVETQEEVLCL*HHGGRSIEVLLTLG
Trigger: GCCAAGTGTCAAAAGAACTTCTATGGAGCGGCCCCCATGATGGCAGAGACACAGCACTTCTTCCTGGGTCTCAACATCCGCTTGTATGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559707.5
ENST00000560124.5
3UTR CCA 90 bp AGAATGGCTGCTTCCCGTATTCAGAATGGAAGTGGGGTGGTCTGGTaGCGACAGGCTAACGTAGAGCTGGCTGCTTTTATGAGAATGCGC +
Preference number: 1 (lower is better)
Translates to: RMAASRIQNGSGVVW*RQANVELAAFMRMR
Trigger: GCGCATTCTCATAAAAGCAGCCAGCTCTACGTTAGCCTGTCGCCACCAGACCACCCCACTTCCATTCTGAATACGGGAAGCAGCCATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258873.9
3UTR CCA 90 bp TCTCTGCCATCATGGGGGCCGCTCCATAGAAGTTCTTTTGACACTTaGCAAATCCCAGTGCCTGGCGAACCTTGGCTAGCACCAGGTAAT +
Preference number: 1 (lower is better)
Translates to: SLPSWGPLHRSSFDT*QIPVPGEPWLAPGN
Trigger: ATTACCTGGTGCTAGCCAAGGTTCGCCAGGCACTGGGATTTGCCAAGTGTCAAAAGAACTTCTATGGAGCGGCCCCCATGATGGCAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559707.5
ENST00000560124.5
3UTR GCA 90 bp GTAGAGCTGGCTGCTTTTATGAGAATGCGCCACTTGACCCCATCCTaGACCTTTGTTTATTCCAGGGCACTAATGGTCACTCGCATGCCC +
Preference number: 1 (lower is better)
Translates to: VELAAFMRMRHLTPS*TFVYSRALMVTRMP
Trigger: GGGCATGCGAGTGACCATTAGTGCCCTGGAATAAACAAAGGTGCAGGATGGGGTCAAGTGGCGCATTCTCATAAAAGCAGCCAGCTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258873.9
3UTR CCA 90 bp CTGAGAATGGCTGCTTCCCGTATTCAGAATGGAAGTGGGGTGGTCTaGTGGCGACAGGCTAACGTAGAGCTGGCTGCTTTTATGAGAATG +
Preference number: 1 (lower is better)
Translates to: LRMAASRIQNGSGVV*WRQANVELAAFMRM
Trigger: CATTCTCATAAAAGCAGCCAGCTCTACGTTAGCCTGTCGCCACCAGACCACCCCACTTCCATTCTGAATACGGGAAGCAGCCATTCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258873.9
3UTR CCA 90 bp ACCCTCTGGCAGAACTCCATAGCTTGTTCAGTCAGATTATCAGTCTaGTCAGAGGTGTCTGGGTCCAGAGTGCACTTCAAGGTGAGCAGC +
Preference number: 1 (lower is better)
Translates to: TLWQNSIACSVRLSV*SEVSGSRVHFKVSS
Trigger: GCTGCTCACCTTGAAGTGCACTCTGGACCCAGACACCTCTGACCAGACTGATAATCTGACTGAACAAGCTATGGAGTTCTGCCAGAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560124.5
3UTR TCA 90 bp ATTGTTGGCGTAAGACCTGGTAAATGTAGAGCCAGTGCTGTGCCCTaGCCTGGAGATCTAACAGACTTGGCAGAAATGCCTGTGCCCAGA +
Preference number: 1 (lower is better)
Translates to: IVGVRPGKCRASAVP*PGDLTDLAEMPVPR
Trigger: TCTGGGCACAGGCATTTCTGCCAAGTCTGTTAGATCTCCAGGTCAGGGCACAGCACTGGCTCTACATTTACCAGGTCTTACGCCAACAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
3UTR TCA 90 bp GTTTCCTGTTCAGATGCCTTCGGTCATTTTGGCTCAGCTTGCTACTaGGAATGGCTGCTTCCCGTATTCAGAATGGAAGTGGGGTGGTCT +
Preference number: 1 (lower is better)
Translates to: VSCSDAFGHFGSACY*EWLLPVFRMEVGWS
Trigger: AGACCACCCCACTTCCATTCTGAATACGGGAAGCAGCCATTCTCAGTAGCAAGCTGAGCCAAAATGACCGAAGGCATCTGAACAGGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258873.9
3UTR TCA 90 bp CATCAAGAGCACCTTATTCTTTGCAGAGTGCTGTTGTATACACTATaGGATTGGATCCCGATCCTCCTGGGCTGGGTAGATGGTGGTGGA +
Preference number: 1 (lower is better)
Translates to: HQEHLILCRVLLYTL*DWIPILLGWVDGGG
Trigger: TCCACCACCATCTACCCAGCCCAGGAGGATCGGGATCCAATCTCATAGTGTATACAACAGCACTCTGCAAAGAATAAGGTGCTCTTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258873.9
3UTR GCA 90 bp TCCAAAACTGAGATGTTTGCTTTCTCTACCTGTTTCCTGTTCAGATaGCTTCGGTCATTTTGGCTCAGCTTGCTACTGAGAATGGCTGCT +
Preference number: 1 (lower is better)
Translates to: SKTEMFAFSTCFLFR*LRSFWLSLLLRMAA
Trigger: AGCAGCCATTCTCAGTAGCAAGCTGAGCCAAAATGACCGAAGGCATCTGAACAGGAAACAGGTAGAGAAAGCAAACATCTCAGTTTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258873.9
3UTR CCA 90 bp TTTGCTTTCTCTACCTGTTTCCTGTTCAGATGCCTTCGGTCATTTTaGCTCAGCTTGCTACTGAGAATGGCTGCTTCCCGTATTCAGAAT +
Preference number: 1 (lower is better)
Translates to: FAFSTCFLFRCLRSF*LSLLLRMAASRIQN
Trigger: ATTCTGAATACGGGAAGCAGCCATTCTCAGTAGCAAGCTGAGCCAAAATGACCGAAGGCATCTGAACAGGAAACAGGTAGAGAAAGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258873.9
3UTR-3UTR TCA 90 bp ACCCGGGGCACCCCCATGTGTGATGTGGGCTCCACCTCCCGCAGCGTGTTCACCTGCCTGTGCCCAGACTaGAGAGACCTGGGGCTCAGG +
Preference number: 2 (lower is better)
Translates to: TRGTPMCDVGSTSRSVFTCLCPD*RDLGLR
Trigger: CCTGAGCCCCAGGTCTCTTCAGTCTGGGCACAGGCA...GGTGAACACGCTGCGGGAGGTGGAGCCCACATCACACATGGGGGTGCCCCGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000560124.5
3UTR-3UTR GCA 90 bp ATCTTCTCCCATACCCGGGGCACCCCCATGTGTGATGTGGGCTCCACCTCCCGCGCCACACTGTGGGCCTaGTTCAGGCCGAGCTTCAGG +
Preference number: 2 (lower is better)
Translates to: IFSHTRGTPMCDVGSTSRATLWA*FRPSFR
Trigger: CCTGAAGCTCGGCCTGAAGCAGGCCCACAGTGTGGC...GCGGGAGGTGGAGCCCACATCACACATGGGGGTGCCCCGGGTATGGGAGAAGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559707.5
3UTR-3UTR GCA 90 bp CAGCATCTTTCGCCGGATGAAGCCAGACTGAGCCGCCACCTCCTGGATGCGCTCCTCCTGCTGGACTTCTaGCGGCCGGATGTCACCGGC +
Preference number: 2 (lower is better)
Translates to: QHLSPDEARLSRHLLDALLLLDF*RPDVTG
Trigger: GCCGGTGACATCCGGCCGGCAGAAGTCCAGCAGGAG...GAGCGCATCCAGGAGGTGGCGGCTCAGTCTGGCTTCATCCGGCGAAAGATGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559707.5
ENST00000560124.5
3UTR-3UTR CCA 90 bp TCCCATACCCGGGGCACCCCCATGTGTGATGTGGGCTCCACCTCCCGCAGCGTGTGTTCCCACTTGTCCTaGCGCTTGAAGCCCAAAGCG +
Preference number: 2 (lower is better)
Translates to: SHTRGTPMCDVGSTSRSVCSHLS*RLKPKA
Trigger: CGCTTTGGGCTTCAAGCGCCAGGACAAGTGGGAACA...CACGCTGCGGGAGGTGGAGCCCACATCACACATGGGGGTGCCCCGGGTATGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559707.5
3UTR-3UTR CCA 90 bp ATCTTCTCCCATACCCGGGGCACCCCCATGTGTGATGTGGGCTCCACCTCCCGCACTACCACCTCCTGCTaGACTTCTGCCGGCCGGATG +
Preference number: 2 (lower is better)
Translates to: IFSHTRGTPMCDVGSTSRTTTSC*TSAGRM
Trigger: CATCCGGCCGGCAGAAGTCCAGCAGGAGGTGGTAGT...GCGGGAGGTGGAGCCCACATCACACATGGGGGTGCCCCGGGTATGGGAGAAGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559707.5
ENST00000560124.5
3UTR CAA 90 bp CCTGCAAATACTGTGCCCACTGCCGAGAAGAACCACTCCGGGGAGTaGAAGCCGAGGATGGCCACACTGTGGGCCTGCTTCAGGCCGAGC +
Preference number: 2 (lower is better)
Translates to: PANTVPTAEKNHSGE*KPRMATLWACFRPS
Trigger: GCTCGGCCTGAAGCAGGCCCACAGTGTGGCCATCCTCGGCTTCAACTCCCCGGAGTGGTTCTTCTCGGCAGTGGGCACAGTATTTGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
3UTR-3UTR GCA 90 bp CTCCTGCTGGACTTCTGCCGGCCGGATGTCACCGGCCTGGCTGCCGTACCGTGCAGGATCTTTTCCAGCTaGTTCTGCGTGTCGACCATG +
Preference number: 2 (lower is better)
Translates to: LLLDFCRPDVTGLAAVPCRIFSS*FCVSTM
Trigger: CATGGTCGACACGCAGAAGCAGCTGGAAAAGATCCT...GCACGGTACGGCAGCCAGGCCGGTGACATCCGGCCGGCAGAAGTCCAGCAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559707.5
3UTR-3UTR CCA 90 bp GGATGGCCACACTGTGGGCCTGCTTCAGGCCGAGCTTCAGGAAGCCCTTGGCGGTGTTCCCACTTGTCCTaGCGCTTGAAGCCCAAAGCG +
Preference number: 2 (lower is better)
Translates to: GWPHCGPASGRASGSPWRCSHLS*RLKPKA
Trigger: CGCTTTGGGCTTCAAGCGCCAGGACAAGTGGGAACA...CCGCCAAGGGCTTCCTGAAGCTCGGCCTGAAGCAGGCCCACAGTGTGGCCATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
3UTR-3UTR CCA 90 bp AGGTTCTGCTCCAAGGTCACCGACATGGCCCACAGCAGCATCTTTCGCCGGATGCCCCCATGTGTGATGTaGGCTCCACCTCCCGCAGCG +
Preference number: 2 (lower is better)
Translates to: RFCSKVTDMAHSSIFRRMPPCVM*APPPAA
Trigger: CGCTGCGGGAGGTGGAGCCCACATCACACATGGGGG...CATCCGGCGAAAGATGCTGCTGTGGGCCATGTCGGTGACCTTGGAGCAGAACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559707.5
ENST00000560124.5
3UTR-3UTR CCA 90 bp CTCCATCTTCACGGCCTCCTCGATGGGCACAGGGGGCACATTCTCCCCACCAGCATGCCCTCTGCGTCCTaGTTCACCAGCTTCACCCGA +
Preference number: 2 (lower is better)
Translates to: LHLHGLLDGHRGHILPTSMPSAS*FTSFTR
Trigger: TCGGGTGAAGCTGGTGAACCAGGACGCAGAGGGCAT...GCTGGTGGGGAGAATGTGCCCCCTGTGCCCATCGAGGAGGCCGTGAAGATGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560124.5
3UTR-3UTR GCA 90 bp AGCCGCCACCTCCTGGATGCGCTCCATGATCTTCTCCCATACCCGGGGCACCCCAAATACTGTGCCCACTaGCGAGAAGAACCACTCCGG +
Preference number: 2 (lower is better)
Translates to: SRHLLDALHDLLPYPGHPKYCAH*REEPLR
Trigger: CCGGAGTGGTTCTTCTCGGCAGTGGGCACAGTATTT...GGGGTGCCCCGGGTATGGGAGAAGATCATGGAGCGCATCCAGGAGGTGGCGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559707.5
3UTR-3UTR CCA 90 bp CTCCATCTTCACGGCCTCCTCGATGGGCACAGGGGGCACATTCTCCCCACCAGCCCAAGGTCACCGACATaGCCCACAGCAGCATCTTTC +
Preference number: 2 (lower is better)
Translates to: LHLHGLLDGHRGHILPTSPRSPT*PTAASF
Trigger: GAAAGATGCTGCTGTGGGCCATGTCGGTGACCTTGG...GCTGGTGGGGAGAATGTGCCCCCTGTGCCCATCGAGGAGGCCGTGAAGATGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560124.5
3UTR CAA 90 bp GAGCTTCAGGAAGCCCTTGGCGGCTCTGCGGGCGAGCAGGTAGTATaGGGAGTAGGAGATGTGTTCCCACTTGTCCTGGCGCTTGAAGCC +
Preference number: 2 (lower is better)
Translates to: ELQEALGGSAGEQVV*GVGDVFPLVLALEA
Trigger: GGCTTCAAGCGCCAGGACAAGTGGGAACACATCTCCTACTCCCAATACTACCTGCTCGCCCGCAGAGCCGCCAAGGGCTTCCTGAAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
3UTR-3UTR TCA 90 bp TCCAAGGTCACCGACATGGCCCACAGCAGCATCTTTCGCCGGATGAAGCCAGACGGGCACCAACTTGCCTaGGCTGTACAGCCGGTAGTT +
Preference number: 2 (lower is better)
Translates to: SKVTDMAHSSIFRRMKPDGHQLA*AVQPVV
Trigger: AACTACCGGCTGTACAGCTCAGGCAAGTTGGTGCCC...GTCTGGCTTCATCCGGCGAAAGATGCTGCTGTGGGCCATGTCGGTGACCTTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560124.5
3UTR-3UTR GCA 90 bp GCTGGTGGTGTAGATGCCAGTGACGATGCCACCTGCAAATACTGTGCCCACTGCAGCCCTTGGCGGCTCTaGGGGCGAGCAGGTAGTATT +
Preference number: 2 (lower is better)
Translates to: AGGVDASDDATCKYCAHCSPWRL*GRAGSI
Trigger: AATACTACCTGCTCGCCCGCAGAGCCGCCAAGGGCT...GCAGTGGGCACAGTATTTGCAGGTGGCATCGTCACTGGCATCTACACCACCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
3UTR-3UTR TCA 90 bp CAGCTGCTTCTGCGTGTCGACCATGATGACATTGGCGCAGCAGTCATAAGCGATACCACTCCGGGGAGTTaGAGCCGAGGATGGCCACAC +
Preference number: 2 (lower is better)
Translates to: QLLLRVDHDDIGAAVISDTTPGS*SRGWPH
Trigger: GTGTGGCCATCCTCGGCTTCAACTCCCCGGAGTGGT...ATCGCTTATGACTGCTGCGCCAATGTCATCATGGTCGACACGCAGAAGCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
3UTR-3UTR CCA 90 bp TCTTTTGACACTTGGCAAATCCCAGTGCCTGGCGAACCTTGGCTAGCACCAGGTAGGATGGCCACACTGTaGGCCTGCTTCAGGCCGAGC +
Preference number: 2 (lower is better)
Translates to: SFDTWQIPVPGEPWLAPGRMATL*ACFRPS
Trigger: GCTCGGCCTGAAGCAGGCCCACAGTGTGGCCATCCT...ACCTGGTGCTAGCCAAGGTTCGCCAGGCACTGGGATTTGCCAAGTGTCAAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559707.5
3UTR-3UTR CCA 90 bp CAGACTGAAGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTGTGTCTCTGCCATCATaGGGGCCGCTCCATAGAAGT +
Preference number: 2 (lower is better)
Translates to: QTEETWGSGRGSERLPSIVSLPS*GPLHRS
Trigger: ACTTCTATGGAGCGGCCCCCATGATGGCAGAGACAC...AATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCTTCAGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560124.5
3UTR-3UTR GCA 90 bp GATGGCCTCACAAGTCTTGTCCTCCATGTTCAGGTAGCCCATGAATATGGTGCGCTGACTACCACCTCCTaGTGGACTTCTGCCGGCCGG +
Preference number: 2 (lower is better)
Translates to: DGLTSLVLHVQVAHEYGALTTTS*WTSAGR
Trigger: CCGGCCGGCAGAAGTCCAGCAGGAGGTGGTAGTCAG...CGCACCATATTCATGGGCTACCTGAACATGGAGGACAAGACTTGTGAGGCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560124.5
3UTR-3UTR TCA 90 bp TCTTTTGACACTTGGCAAATCCCAGTGCCTGGCGAACCTTGGCTAGCACCAGGTGCCAGTGCTGTGCCCTaGCCTGGAGATCTAACAGAC +
Preference number: 2 (lower is better)
Translates to: SFDTWQIPVPGEPWLAPGASAVP*PGDLTD
Trigger: GTCTGTTAGATCTCCAGGTCAGGGCACAGCACTGGC...ACCTGGTGCTAGCCAAGGTTCGCCAGGCACTGGGATTTGCCAAGTGTCAAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560124.5
3UTR-3UTR TCA 90 bp CAGACTGAAGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCACGTGATATTGTCTTaGCTCAGCATCACGCCCTTG +
Preference number: 2 (lower is better)
Translates to: QTEETWGSGRGSERLPSIHVILS*LSITPL
Trigger: CAAGGGCGTGATGCTGAGTCAAGACAATATCACGTG...AATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCTTCAGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560124.5
3UTR-3UTR GCA 90 bp TGCAGCGCACGTGAGCAGTATCAGCCATCTCTCTCCTACCCGCTCCACAGCCTAGAGGCTCGGAACGCCTaGCCTCTATTCTATAGAAAC +
Preference number: 2 (lower is better)
Translates to: CSAREQYQPSLSYPLHSLEARNA*PLFYRN
Trigger: GTTTCTATAGAATAGAGGGCAGGCGTTCCGAGCCTC...TAGGCTGTGGAGCGGGTAGGAGAGAGATGGCTGATACTGCTCACGTGCGCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
3UTR-3UTR GCA 90 bp TCTTTTGACACTTGGCAAATCCCAGTGCCTGGCGAACCTTGGCTAGCACCAGGTCTGGCTGCCGTACCGTaGCGTCCACGTGATATTGTC +
Preference number: 2 (lower is better)
Translates to: SFDTWQIPVPGEPWLAPGLAAVP*RPRDIV
Trigger: GACAATATCACGTGGACGGCACGGTACGGCAGCCAG...ACCTGGTGCTAGCCAAGGTTCGCCAGGCACTGGGATTTGCCAAGTGTCAAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559707.5
ENST00000560124.5
3UTR-3UTR GCA 90 bp ATGTTGACCCTCCGGATCCCCTCTTCGATGGCCTGGTACACGGCCTCATCCTTCAGACCCAGGAAGAAGTaGTGTGTCTCTGCCATCATG +
Preference number: 2 (lower is better)
Translates to: MLTLRIPSSMAWYTASSFRPRKK*CVSAIM
Trigger: CATGATGGCAGAGACACAGCACTTCTTCCTGGGTCT...GAAGGATGAGGCCGTGTACCAGGCCATCGAAGAGGGGATCCGGAGGGTCAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560124.5
3UTR-3UTR CCA 90 bp CACAAAATTATGCCATGCTGGGGCTTGAGCTTGAGCTTGGGCTTAGGCTTGGGCGGAAGTGGGGTGGTCTaGTGGCGACAGGCTAACGTA +
Preference number: 2 (lower is better)
Translates to: HKIMPCWGLSLSLGLGLGGSGVV*WRQANV
Trigger: TACGTTAGCCTGTCGCCACCAGACCACCCCACTTCC...GCCCAAGCCTAAGCCCAAGCTCAAGCTCAAGCCCCAGCATGGCATAATTTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000258873.9
3UTR-3UTR TCA 90 bp TCTTTTGACACTTGGCAAATCCCAGTGCCTGGCGAACCTTGGCTAGCACCAGGTTTCCTGCAGCGCACGTaGGCAGTATCAGCCATCTCT +
Preference number: 2 (lower is better)
Translates to: SFDTWQIPVPGEPWLAPGFLQRT*AVSAIS
Trigger: AGAGATGGCTGATACTGCTCACGTGCGCTGCAGGAA...ACCTGGTGCTAGCCAAGGTTCGCCAGGCACTGGGATTTGCCAAGTGTCAAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560124.5
3UTR-3UTR GCA 90 bp AACTCCATAGCTTGTTCAGTCAGATTATCAGTCTGGTCAGAGGTGTCTGGGTCCCCAGCATCACCCGTGTaGAGCCAGCCTTCCTCGTCG +
Preference number: 2 (lower is better)
Translates to: NSIACSVRLSVWSEVSGSPASPV*SQPSSS
Trigger: CGACGAGGAAGGCTGGCTGCACACGGGTGATGCTGG...GGACCCAGACACCTCTGACCAGACTGATAATCTGACTGAACAAGCTATGGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560124.5
3UTR-3UTR GCA 90 bp TTTCAGTTTCATCGTGGGACCCAACTCTCCACCCGAAATGGAGAAGTCTCTCTCACACTGTGGTGGCTCTaGTGCCCACCCTCTGGCAGA +
Preference number: 2 (lower is better)
Translates to: FQFHRGTQLSTRNGEVSLTLWWL*CPPSGR
Trigger: TCTGCCAGAGGGTGGGCAGCAGAGCCACCACAGTGT...GAGAGAGACTTCTCCATTTCGGGTGGAGAGTTGGGTCCCACGATGAAACTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560124.5
3UTR-3UTR CCA 90 bp GTTGTGACTGATTGCTTTTCCTGCAGCGCACGTGAGCAGTATCAGCCATCTCTCCAGACTGAAGAGACCTaGGGCTCAGGAAGAGGCTCG +
Preference number: 2 (lower is better)
Translates to: VVTDCFSCSAREQYQPSLQTEET*GSGRGS
Trigger: CGAGCCTCTTCCTGAGCCCCAGGTCTCTTCAGTCTG...GAGAGATGGCTGATACTGCTCACGTGCGCTGCAGGAAAAGCAATCAGTCACAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
3UTR-3UTR CCA 90 bp GAACTTCCTCTGGTCCCCAATGAGCATGGCGTTGCTGATGATGGGCAGCTCCATTGCTGTGCCCTGACCTaGAGATCTAACAGACTTGGC +
Preference number: 2 (lower is better)
Translates to: ELPLVPNEHGVADDGQLHCCALT*RSNRLG
Trigger: GCCAAGTCTGTTAGATCTCCAGGTCAGGGCACAGCA...ATGGAGCTGCCCATCATCAGCAACGCCATGCTCATTGGGGACCAGAGGAAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560124.5
3UTR-3UTR CCA 90 bp AGTTTCATCGTGGGACCCAACTCTCCACCCGAAATGGAGAAGTCTCTCTCGAGAGGATCCCCTCTTCGATaGCCTGGTACACGGCCTCAT +
Preference number: 2 (lower is better)
Translates to: SFIVGPNSPPEMEKSLSRGSPLR*PGTRPH
Trigger: ATGAGGCCGTGTACCAGGCCATCGAAGAGGGGATCC...TCTCGAGAGAGACTTCTCCATTTCGGGTGGAGAGTTGGGTCCCACGATGAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560124.5
3UTR-3UTR CCA 90 bp TCTGCTGCCCACCCTCTGGCAGAACTCCATAGCTTGTTCAGTCAGATTATCAGTCAGACTGAAGAGACCTaGGGCTCAGGAAGAGGCTCG +
Preference number: 2 (lower is better)
Translates to: SAAHPLAELHSLFSQIISQTEET*GSGRGS
Trigger: CGAGCCTCTTCCTGAGCCCCAGGTCTCTTCAGTCTG...ACTGATAATCTGACTGAACAAGCTATGGAGTTCTGCCAGAGGGTGGGCAGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560124.5
3UTR-3UTR CCA 90 bp GATGGCCTCACAAGTCTTGTCCTCCATGTTCAGGTAGCCCATGAATATGGTGCGACTAGCACACAGCACTaGTTGGGCTGCTGGGTGTCA +
Preference number: 2 (lower is better)
Translates to: DGLTSLVLHVQVAHEYGATSTQH*LGCWVS
Trigger: TGACACCCAGCAGCCCAACCAGTGCTGTGTGCTAGT...CGCACCATATTCATGGGCTACCTGAACATGGAGGACAAGACTTGTGAGGCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560124.5
3UTR-3UTR CCA 90 bp GATGGCCTCACAAGTCTTGTCCTCCATGTTCAGGTAGCCCATGAATATGGTGCGCCTTGGGGTTCCCAGTaGTGCCGGAAGTGTAGACTA +
Preference number: 2 (lower is better)
Translates to: DGLTSLVLHVQVAHEYGAPWGSQ*CRKCRL
Trigger: TAGTCTACACTTCCGGCACCACTGGGAACCCCAAGG...CGCACCATATTCATGGGCTACCTGAACATGGAGGACAAGACTTGTGAGGCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560124.5
3UTR-3UTR CCA 90 bp GGACAGGAACTTCCTCTGGTCCCCAATGAGCATGGCGTTGCTGATGATGGGCAGAGTTCTTTTGACACTTaGCAAATCCCAGTGCCTGGC +
Preference number: 2 (lower is better)
Translates to: GQELPLVPNEHGVADDGQSSFDT*QIPVPG
Trigger: GCCAGGCACTGGGATTTGCCAAGTGTCAAAAGAACT...CTGCCCATCATCAGCAACGCCATGCTCATTGGGGACCAGAGGAAGTTCCTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560124.5
3UTR-3UTR TCA 90 bp CAAACAGGCAGCAGCAGTTTTATTAAGCATCAAGTCAGTTGGCATGTGGGTGGCGCCAGTGCTGTGCCCTaGCCTGGAGATCTAACAGAC +
Preference number: 2 (lower is better)
Translates to: QTGSSSFIKHQVSWHVGGASAVP*PGDLTD
Trigger: GTCTGTTAGATCTCCAGGTCAGGGCACAGCACTGGC...GCCACCCACATGCCAACTGACTTGATGCTTAATAAAACTGCTGCTGCCTGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258873.9
ENST00000560124.5
3UTR-3UTR TCA 90 bp GGCCTGGTACACGGCCTCATCCTTCTTCTCTATGATCTCGGACACTGTGGTGGCTTCTGGAAGGAGAGCTaGTCTCATTTGTCACCTGAA +
Preference number: 2 (lower is better)
Translates to: GLVHGLILLLYDLGHCGGFWKES*SHLSPE
Trigger: TTCAGGTGACAAATGAGATCAGCTCTCCTTCCAGAA...GCCACCACAGTGTCCGAGATCATAGAGAAGAAGGATGAGGCCGTGTACCAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560124.5
3UTR-3UTR GCA 90 bp GGGGTGGTCTGGTGGCGACAGGCTAACGTAGAGCTGGCTGCTTTTATGAGAATGACTGATTGCTTTTCCTaGAGCGCACGTGAGCAGTAT +
Preference number: 2 (lower is better)
Translates to: GVVWWRQANVELAAFMRMTDCFS*SAREQY
Trigger: ATACTGCTCACGTGCGCTGCAGGAAAAGCAATCAGT...CATTCTCATAAAAGCAGCCAGCTCTACGTTAGCCTGTCGCCACCAGACCACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000258873.9
3UTR-3UTR GCA 90 bp ATCTTTTCCAGCTGCTTCTGCGTGTCGACCATGATGACATTGGCGCAGCAGTCAAAATACTGTGCCCACTaGCGAGAAGAACCACTCCGG +
Preference number: 2 (lower is better)
Translates to: IFSSCFCVSTMMTLAQQSKYCAH*REEPLR
Trigger: CCGGAGTGGTTCTTCTCGGCAGTGGGCACAGTATTT...TGACTGCTGCGCCAATGTCATCATGGTCGACACGCAGAAGCAGCTGGAAAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
3UTR-3UTR CCA 90 bp CACAAAATTATGCCATGCTGGGGCTTGAGCTTGAGCTTGGGCTTAGGCTTGGGCTATTCAGAATGGAAGTaGGGTGGTCTGGTGGCGACA +
Preference number: 2 (lower is better)
Translates to: HKIMPCWGLSLSLGLGLGYSEWK*GGLVAT
Trigger: TGTCGCCACCAGACCACCCCACTTCCATTCTGAATA...GCCCAAGCCTAAGCCCAAGCTCAAGCTCAAGCCCCAGCATGGCATAATTTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258873.9
3UTR CAA 90 bp CGACAGGCTAACGTAGAGCTGGCTGCTTTTATGAGAATGCGCCACTaGACCCCATCCTGCACCTTTGTTTATTCCAGGGCACTAATGGTC +
Preference number: 2 (lower is better)
Translates to: RQANVELAAFMRMRH*TPSCTFVYSRALMV
Trigger: GACCATTAGTGCCCTGGAATAAACAAAGGTGCAGGATGGGGTCAAGTGGCGCATTCTCATAAAAGCAGCCAGCTCTACGTTAGCCTGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258873.9
3UTR-3UTR TCA 90 bp AGAGAGGTGCCTGAATTACATAGTGGGCCCTTTTATTGTGTAGGATGGAAAGATTGCCTGTGCCCAGACTaGAGAGACCTGGGGCTCAGG +
Preference number: 2 (lower is better)
Translates to: REVPELHSGPFYCVGWKDCLCPD*RDLGLR
Trigger: CCTGAGCCCCAGGTCTCTTCAGTCTGGGCACAGGCA...ATCTTTCCATCCTACACAATAAAAGGGCCCACTATGTAATTCAGGCACCTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258873.9
3UTR-3UTR TCA 90 bp AAAATTATGCCATGCTGGGGCTTGAGCTTGAGCTTGGGCTTAGGCTTGGGCTCACTGTGCACAGTCCTGTaGGTTAAATGCCCACTACTC +
Preference number: 2 (lower is better)
Translates to: KIMPCWGLSLSLGLGLGSLCTVL*VKCPLL
Trigger: GAGTAGTGGGCATTTAACTCACAGGACTGTGCACAG...TGAGCCCAAGCCTAAGCCCAAGCTCAAGCTCAAGCCCCAGCATGGCATAATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258873.9
3UTR-3UTR TCA 90 bp GCATACAAGCGGATGTTGAGACCCAGGAAGAAGTGCTGTGTCTCTGCCATCATGCATTCCCCAGCTCCATaGATTCCTCCATCGTGTACA +
Preference number: 2 (lower is better)
Translates to: AYKRMLRPRKKCCVSAIMHSPAP*IPPSCT
Trigger: TGTACACGATGGAGGAATTCATGGAGCTGGGGAATG...CATGATGGCAGAGACACAGCACTTCTTCCTGGGTCTCAACATCCGCTTGTATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559707.5
ENST00000560124.5
3UTR-3UTR GCA 90 bp ACTCTGCACCCGTTAAACAGTAACTTTCCCTTCCCCCTCCCATCCTCTGACACCGCTACTGAGAATGGCTaGTTCCCGTATTCAGAATGG +
Preference number: 2 (lower is better)
Translates to: TLHPLNSNFPFPLPSSDTATENG*FPYSEW
Trigger: CCATTCTGAATACGGGAAGCAGCCATTCTCAGTAGC...GGTGTCAGAGGATGGGAGGGGGAAGGGAAAGTTACTGTTTAACGGGTGCAGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258873.9
3UTR-3UTR GCA 90 bp AACTACCCACACGTGAAGCTTCTTGGAATTGTCAGCTATTGTTGGCGTAAGACCATGCCCACTACTCTCTaGACTGGTCCCACCTGCTCA +
Preference number: 2 (lower is better)
Translates to: NYPHVKLLGIVSYCWRKTMPTTL*TGPTCS
Trigger: TGAGCAGGTGGGACCAGTGCAGAGAGTAGTGGGCAT...GGTCTTACGCCAACAATAGCTGACAATTCCAAGAAGCTTCACGTGTGGGTAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258873.9
3UTR-3UTR CCA 90 bp TCTTGTTTGGAGGAGGTTCTTTATATATCACGACTGCCTTTAGATGTGGCAACTAGGATGGCCACACTGTaGGCCTGCTTCAGGCCGAGC +
Preference number: 2 (lower is better)
Translates to: SCLEEVLYISRLPLDVATRMATL*ACFRPS
Trigger: GCTCGGCCTGAAGCAGGCCCACAGTGTGGCCATCCT...AGTTGCCACATCTAAAGGCAGTCGTGATATATAAAGAACCTCCTCCAAACAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
3UTR CAA 90 bp TCTACCTGTTTCCTGTTCAGATGCCTTCGGTCATTTTGGCTCAGCTaGCTACTGAGAATGGCTGCTTCCCGTATTCAGAATGGAAGTGGG +
Preference number: 2 (lower is better)
Translates to: STCFLFRCLRSFWLS*LLRMAASRIQNGSG
Trigger: CCCACTTCCATTCTGAATACGGGAAGCAGCCATTCTCAGTAGCAAGCTGAGCCAAAATGACCGAAGGCATCTGAACAGGAAACAGGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258873.9
3UTR-3UTR TCA 90 bp TTTCAGTTTCATCGTGGGACCCAACTCTCCACCCGAAATGGAGAAGTCTCTCTCAGTCAGGTCGCTAGGTaGGTTGTGACTGATTGCTTT +
Preference number: 2 (lower is better)
Translates to: FQFHRGTQLSTRNGEVSLSQVAR*VVTDCF
Trigger: AAAGCAATCAGTCACAACTCACCTAGCGACCTGACT...GAGAGAGACTTCTCCATTTCGGGTGGAGAGTTGGGTCCCACGATGAAACTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560124.5
3UTR-3UTR GCA 90 bp TCTGCTGCCCACCCTCTGGCAGAACTCCATAGCTTGTTCAGTCAGATTATCAGTACTGATTGCTTTTCCTaGAGCGCACGTGAGCAGTAT +
Preference number: 2 (lower is better)
Translates to: SAAHPLAELHSLFSQIISTDCFS*SAREQY
Trigger: ATACTGCTCACGTGCGCTGCAGGAAAAGCAATCAGT...ACTGATAATCTGACTGAACAAGCTATGGAGTTCTGCCAGAGGGTGGGCAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560124.5
3UTR-3UTR TCA 90 bp TCTGCTGCCCACCCTCTGGCAGAACTCCATAGCTTGTTCAGTCAGATTATCAGTTGGCTGTCCTGTATGTaGGCTAGCAGCTTTTTAATC +
Preference number: 2 (lower is better)
Translates to: SAAHPLAELHSLFSQIISWLSCM*ASSFLI
Trigger: GATTAAAAAGCTGCTAGCTCACATACAGGACAGCCA...ACTGATAATCTGACTGAACAAGCTATGGAGTTCTGCCAGAGGGTGGGCAGCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560124.5
3UTR-3UTR TCA 90 bp CAGCTTTTTAATCTACCTGGAACTAAGGCCAAAAATTATCAGCCCTTTCGTTCTGCATCTTTCGCCGGATaGAGCCAGACTGAGCCGCCA +
Preference number: 2 (lower is better)
Translates to: QLFNLPGTKAKNYQPFRSASFAG*SQTEPP
Trigger: TGGCGGCTCAGTCTGGCTTCATCCGGCGAAAGATGC...AGAACGAAAGGGCTGATAATTTTTGGCCTTAGTTCCAGGTAGATTAAAAAGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000560124.5
3UTR-3UTR GCA 90 bp CTACCTGGAACTAAGGCCAAAAATTATCAGCCCTTTCGTTCTGGAAGGAGAGCTGAGGCTCGGAACGCCTaGCCTCTATTCTATAGAAAC +
Preference number: 2 (lower is better)
Translates to: LPGTKAKNYQPFRSGRRAEARNA*PLFYRN
Trigger: GTTTCTATAGAATAGAGGGCAGGCGTTCCGAGCCTC...AGCTCTCCTTCCAGAACGAAAGGGCTGATAATTTTTGGCCTTAGTTCCAGGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
3UTR-3UTR CCA 90 bp TTGGCCATCTTGTTTGGAGGAGGTTCTTTATATATCACGACTGCCTTTAGATGTGTACTGGCAGGCCTCTaGGGAGCTGGTGGTGTAGAT +
Preference number: 2 (lower is better)
Translates to: LAILFGGGSLYITTAFRCVLAGL*GAGGVD
Trigger: ATCTACACCACCAGCTCCCCAGAGGCCTGCCAGTAC...ACATCTAAAGGCAGTCGTGATATATAAAGAACCTCCTCCAAACAAGATGGCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
3UTR CAA 90 bp GTTTGCTTTCTCTACCTGTTTCCTGTTCAGATGCCTTCGGTCATTTaGGCTCAGCTTGCTACTGAGAATGGCTGCTTCCCGTATTCAGAA +
Preference number: 2 (lower is better)
Translates to: VCFLYLFPVQMPSVI*AQLATENGCFPYSE
Trigger: TTCTGAATACGGGAAGCAGCCATTCTCAGTAGCAAGCTGAGCCAAAATGACCGAAGGCATCTGAACAGGAAACAGGTAGAGAAAGCAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258873.9
3UTR-3UTR TCA 90 bp CAGCTTTTTAATCTACCTGGAACTAAGGCCAAAAATTATCAGCCCTTTCGTTCTGCCAGTGCTGTGCCCTaGCCTGGAGATCTAACAGAC +
Preference number: 2 (lower is better)
Translates to: QLFNLPGTKAKNYQPFRSASAVP*PGDLTD
Trigger: GTCTGTTAGATCTCCAGGTCAGGGCACAGCACTGGC...AGAACGAAAGGGCTGATAATTTTTGGCCTTAGTTCCAGGTAGATTAAAAAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
3UTR-3UTR CCA 90 bp TTGGCCATCTTGTTTGGAGGAGGTTCTTTATATATCACGACTGCCTTTAGATGTACTAGCACACAGCACTaGTTGGGCTGCTGGGTGTCA +
Preference number: 2 (lower is better)
Translates to: LAILFGGGSLYITTAFRCTSTQH*LGCWVS
Trigger: TGACACCCAGCAGCCCAACCAGTGCTGTGTGCTAGT...ACATCTAAAGGCAGTCGTGATATATAAAGAACCTCCTCCAAACAAGATGGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559707.5
3UTR-3UTR CCA 90 bp CATTGGCCATCTTGTTTGGAGGAGGTTCTTTATATATCACGACTGCCTTTAGATCCTTGGGGTTCCCAGTaGTGCCGGAAGTGTAGACTA +
Preference number: 2 (lower is better)
Translates to: HWPSCLEEVLYISRLPLDPWGSQ*CRKCRL
Trigger: TAGTCTACACTTCCGGCACCACTGGGAACCCCAAGG...ATCTAAAGGCAGTCGTGATATATAAAGAACCTCCTCCAAACAAGATGGCCAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559707.5
3UTR-3UTR GCA 90 bp TTGGCCATCTTGTTTGGAGGAGGTTCTTTATATATCACGACTGCCTTTAGATGTCACCTGCAAATACTGTaGCCACTGCCGAGAAGAACC +
Preference number: 2 (lower is better)
Translates to: LAILFGGGSLYITTAFRCHLQIL*PLPRRT
Trigger: GGTTCTTCTCGGCAGTGGGCACAGTATTTGCAGGTG...ACATCTAAAGGCAGTCGTGATATATAAAGAACCTCCTCCAAACAAGATGGCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
3UTR-3UTR CCA 90 bp ATTCCAAAACTGAGATGTTTGCTTTCTCTACCTGTTTCCTGTTCAGATGCCTTCTGCTGTGCCCTGACCTaGAGATCTAACAGACTTGGC +
Preference number: 2 (lower is better)
Translates to: IPKLRCLLSLPVSCSDAFCCALT*RSNRLG
Trigger: GCCAAGTCTGTTAGATCTCCAGGTCAGGGCACAGCA...GAAGGCATCTGAACAGGAAACAGGTAGAGAAAGCAAACATCTCAGTTTTGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258873.9
3UTR-3UTR TCA 90 bp CAGCTTTTTAATCTACCTGGAACTAAGGCCAAAAATTATCAGCCCTTTCGTTCTCTTGGGCTCAGCTTTTaGCCCTCAGGCATCTCCTTT +
Preference number: 2 (lower is better)
Translates to: QLFNLPGTKAKNYQPFRSLGLSF*PSGISF
Trigger: AAAGGAGATGCCTGAGGGTCAAAAGCTGAGCCCAAG...AGAACGAAAGGGCTGATAATTTTTGGCCTTAGTTCCAGGTAGATTAAAAAGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000258873.9
3UTR-3UTR TCA 90 bp AATTTTGGTAAAGCTCCCTGCCTCCCTTTGCATCAAGAGCACCTTATTCTTTGCCCTTTTCTCAGAGCTTaGCAAAAGATTTGGGAGGCA +
Preference number: 2 (lower is better)
Translates to: NFGKAPCLPLHQEHLILCPFLRA*QKIWEA
Trigger: TGCCTCCCAAATCTTTTGTCAAGCTCTGAGAAAAGG...GCAAAGAATAAGGTGCTCTTGATGCAAAGGGAGGCAGGGAGCTTTACCAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000258873.9
3UTR-3UTR CCA 90 bp ACTGAATTAAAACTACCCACACGTGAAGCTTCTTGGAATTGTCAGCTATTGTTGTGCTGTGCCCTGACCTaGAGATCTAACAGACTTGGC +
Preference number: 2 (lower is better)
Translates to: TELKLPTREASWNCQLLLCCALT*RSNRLG
Trigger: GCCAAGTCTGTTAGATCTCCAGGTCAGGGCACAGCA...CAACAATAGCTGACAATTCCAAGAAGCTTCACGTGTGGGTAGTTTTAATTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
3UTR-3UTR CCA 90 bp CAGCTTTTTAATCTACCTGGAACTAAGGCCAAAAATTATCAGCCCTTTCGTTCTAAGCATCAAGTCAGTTaGCATGTGGGTGGCGGAGTG +
Preference number: 2 (lower is better)
Translates to: QLFNLPGTKAKNYQPFRSKHQVS*HVGGGV
Trigger: CACTCCGCCACCCACATGCCAACTGACTTGATGCTT...AGAACGAAAGGGCTGATAATTTTTGGCCTTAGTTCCAGGTAGATTAAAAAGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
3UTR-3UTR CCA 90 bp AATTTTGGTAAAGCTCCCTGCCTCCCTTTGCATCAAGAGCACCTTATTCTTTGCTGCAAAAGATGCAGGTaGATGTCCCTAGGTCTGTTT +
Preference number: 2 (lower is better)
Translates to: NFGKAPCLPLHQEHLILCCKRCR*MSLGLF
Trigger: AAACAGACCTAGGGACATCCACCTGCATCTTTTGCA...GCAAAGAATAAGGTGCTCTTGATGCAAAGGGAGGCAGGGAGCTTTACCAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258873.9
3UTR-3UTR TCA 90 bp GTATTTGTGTCCCAGCCTCCAAAAATAGATCAGATACAAAAATTAGTTGGGTATGGCTCAGCTTGCTACTaGGAATGGCTGCTTCCCGTA +
Preference number: 2 (lower is better)
Translates to: VFVSQPPKIDQIQKLVGYGSACY*EWLLPV
Trigger: TACGGGAAGCAGCCATTCTCAGTAGCAAGCTGAGCC...ATACCCAACTAATTTTTGTATCTGATCTATTTTTGGAGGCTGGGACACAAATAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000258873.9
3UTR-3UTR GCA 90 bp ACTGAATTAAAACTACCCACACGTGAAGCTTCTTGGAATTGTCAGCTATTGTTGGAGGCTCGGAACGCCTaGCCTCTATTCTATAGAAAC +
Preference number: 2 (lower is better)
Translates to: TELKLPTREASWNCQLLLEARNA*PLFYRN
Trigger: GTTTCTATAGAATAGAGGGCAGGCGTTCCGAGCCTC...CAACAATAGCTGACAATTCCAAGAAGCTTCACGTGTGGGTAGTTTTAATTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
3UTR-3UTR TCA 90 bp GCTAGCAGCTTTTTAATCTACCTGGAACTAAGGCCAAAAATTATCAGCCCTTTCTTCTGGAAGGAGAGCTaGTCTCATTTGTCACCTGAA +
Preference number: 2 (lower is better)
Translates to: ASSFLIYLELRPKIISPFFWKES*SHLSPE
Trigger: TTCAGGTGACAAATGAGATCAGCTCTCCTTCCAGAA...GAAAGGGCTGATAATTTTTGGCCTTAGTTCCAGGTAGATTAAAAAGCTGCTAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
3UTR-3UTR TCA 90 bp ATTCCAAAACTGAGATGTTTGCTTTCTCTACCTGTTTCCTGTTCAGATGCCTTCTGGCTGTCCTGTATGTaGGCTAGCAGCTTTTTAATC +
Preference number: 2 (lower is better)
Translates to: IPKLRCLLSLPVSCSDAFWLSCM*ASSFLI
Trigger: GATTAAAAAGCTGCTAGCTCACATACAGGACAGCCA...GAAGGCATCTGAACAGGAAACAGGTAGAGAAAGCAAACATCTCAGTTTTGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258873.9
3UTR-3UTR CCA 90 bp GTATTTGTGTCCCAGCCTCCAAAAATAGATCAGATACAAAAATTAGTTGGGTATTTCCCGTATTCAGAATaGAAGTGGGGTGGTCTGGTG +
Preference number: 2 (lower is better)
Translates to: VFVSQPPKIDQIQKLVGYFPYSE*KWGGLV
Trigger: CACCAGACCACCCCACTTCCATTCTGAATACGGGAA...ATACCCAACTAATTTTTGTATCTGATCTATTTTTGGAGGCTGGGACACAAATAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000258873.9
3UTR-3UTR CCA 90 bp ATTCCAAAACTGAGATGTTTGCTTTCTCTACCTGTTTCCTGTTCAGATGCCTTCACACGTGAAGCTTCTTaGAATTGTCAGCTATTGTTG +
Preference number: 2 (lower is better)
Translates to: IPKLRCLLSLPVSCSDAFTREAS*NCQLLL
Trigger: CAACAATAGCTGACAATTCCAAGAAGCTTCACGTGT...GAAGGCATCTGAACAGGAAACAGGTAGAGAAAGCAAACATCTCAGTTTTGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258873.9
3UTR CAA 90 bp GGACACCACATGAACCTCTGTTTAGAATACCTACGTATGTATGCATaGGTTTGCTTGTTTCTTGACAGTACATTTTTAGATCTGGCCTTT +
Preference number: 2 (lower is better)
Translates to: GHHMNLCLEYLRMYA*VCLFLDSTFLDLAF
Trigger: AAAGGCCAGATCTAAAAATGTACTGTCAAGAAACAAGCAAACCAATGCATACATACGTAGGTATTCTAAACAGAGGTTCATGTGGTGTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258873.9
3UTR-3UTR GCA 90 bp GTATTTGTGTCCCAGCCTCCAAAAATAGATCAGATACAAAAATTAGTTGGGTATCTCTCCCTTCTCCTCTaGTGCAGCATGATTTTCTTA +
Preference number: 2 (lower is better)
Translates to: VFVSQPPKIDQIQKLVGYLSLLL*CSMIFL
Trigger: TAAGAAAATCATGCTGCAGCAGAGGAGAAGGGAGAG...ATACCCAACTAATTTTTGTATCTGATCTATTTTTGGAGGCTGGGACACAAATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000258873.9
3UTR GCA 72 bp GCACAGTGTAGGGAAGCTGTGGGCAGCTGGGGTCTATaGGCAGGCGCACCCGCCCATCGGCCCGAGTCGTCC +
Preference number: 3 (lower is better)
Translates to: AQCREAVGSWGL*AGAPAHRPESS
Trigger: GGACGACTCGGGCCGATGGGCGGGTGCGCCTGCGCATAGACCCCAGCTGCCCACAGCTTCCCTACACTGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557935.1
3UTR GCA 72 bp GGGCAGGTAGCTGACTACCACCTCCTGCTGGACTTCTaGCGGCCGGATGTCACCGGCCTGGCTGCCGTACCG +
Preference number: 3 (lower is better)
Translates to: GQVADYHLLLDF*RPDVTGLAAVP
Trigger: CGGTACGGCAGCCAGGCCGGTGACATCCGGCCGGCAGAAGTCCAGCAGGAGGTGGTAGTCAGCTACCTGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559707.5
ENST00000560124.5
3UTR-3UTR CAA 90 bp CTCCTGCTGGACTTCTGCCGGCCGGATGTCACCGGCCTGGCTGCCGTACCGTGCGAGATGTGTTCCCACTaGTCCTGGCGCTTGAAGCCC +
Preference number: 3 (lower is better)
Translates to: LLLDFCRPDVTGLAAVPCEMCSH*SWRLKP
Trigger: GGGCTTCAAGCGCCAGGACAAGTGGGAACACATCTC...GCACGGTACGGCAGCCAGGCCGGTGACATCCGGCCGGCAGAAGTCCAGCAGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559707.5
3UTR-3UTR CAA 90 bp CTCCATCTTCACGGCCTCCTCGATGGGCACAGGGGGCACATTCTCCCCACCAGCCAGCCGGGCACCAACTaGCCTGAGCTGTACAGCCGG +
Preference number: 3 (lower is better)
Translates to: LHLHGLLDGHRGHILPTSQPGTN*PELYSR
Trigger: CCGGCTGTACAGCTCAGGCAAGTTGGTGCCCGGCTG...GCTGGTGGGGAGAATGTGCCCCCTGTGCCCATCGAGGAGGCCGTGAAGATGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560124.5
3UTR TCA 72 bp TCTGGATGTGGTAGGGCCGGGCCGCCGCGTTCATGTTaGCCCTCCGGATCCCCTCTTCGATGGCCTGGTACA +
Preference number: 3 (lower is better)
Translates to: SGCGRAGPPRSC*PSGSPLRWPGT
Trigger: TGTACCAGGCCATCGAAGAGGGGATCCGGAGGGTCAACATGAACGCGGCGGCCCGGCCCTACCACATCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560124.5
3UTR GCA 72 bp AAGGGCTTCAGGTCGCTGCCGGGGCAGGTGAGGTTCTaGTCCAAGGTCACCGACATGGCCCACAGCAGCATC +
Preference number: 3 (lower is better)
Translates to: KGFRSLPGQVRF*SKVTDMAHSSI
Trigger: GATGCTGCTGTGGGCCATGTCGGTGACCTTGGAGCAGAACCTCACCTGCCCCGGCAGCGACCTGAAGCCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559707.5
ENST00000560124.5
3UTR CCA 72 bp CTCGTAGAACATCCGATGCACAGTGTAGGGAAGCTGTaGGCAGCTGGGGTCTATGCGCAGGCGCACCCGCCC +
Preference number: 3 (lower is better)
Translates to: LVEHPMHSVGKL*AAGVYAQAHPP
Trigger: GGGCGGGTGCGCCTGCGCATAGACCCCAGCTGCCCACAGCTTCCCTACACTGTGCATCGGATGTTCTACGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557935.1
3UTR CCA 72 bp CACTCCGGGGAGTTGAAGCCGAGGATGGCCACACTGTaGGCCTGCTTCAGGCCGAGCTTCAGGAAGCCCTTG +
Preference number: 3 (lower is better)
Translates to: HSGELKPRMATL*ACFRPSFRKPL
Trigger: CAAGGGCTTCCTGAAGCTCGGCCTGAAGCAGGCCCACAGTGTGGCCATCCTCGGCTTCAACTCCCCGGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
3UTR CCA 72 bp TCCTGCTGGACTTCTGCCGGCCGGATGTCACCGGCCTaGCTGCCGTACCGTGCCGTCCACGTGATATTGTCT +
Preference number: 3 (lower is better)
Translates to: SCWTSAGRMSPA*LPYRAVHVILS
Trigger: AGACAATATCACGTGGACGGCACGGTACGGCAGCCAGGCCGGTGACATCCGGCCGGCAGAAGTCCAGCAGGA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559707.5
ENST00000560124.5
3UTR TCA 72 bp TCACCGACATGGCCCACAGCAGCATCTTTCGCCGGATaGAGCCAGACTGAGCCGCCACCTCCTGGATGCGCT +
Preference number: 3 (lower is better)
Translates to: SPTWPTAASFAG*SQTEPPPPGCA
Trigger: AGCGCATCCAGGAGGTGGCGGCTCAGTCTGGCTTCATCCGGCGAAAGATGCTGCTGTGGGCCATGTCGGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559707.5
ENST00000560124.5
3UTR GCA 72 bp TGCCGGCCGGATGTCACCGGCCTGGCTGCCGTACCGTaGCGTCCACGTGATATTGTCTTGACTCAGCATCAC +
Preference number: 3 (lower is better)
Translates to: CRPDVTGLAAVP*RPRDIVLTQHH
Trigger: GTGATGCTGAGTCAAGACAATATCACGTGGACGGCACGGTACGGCAGCCAGGCCGGTGACATCCGGCCGGCA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559707.5
ENST00000560124.5
3UTR-3UTR CAA 90 bp GACCATGATGACATTGGCGCAGCAGTCATAAGCGATGTACTGGCAGGCCTCTGGAGCTTCAGGAAGCCCTaGGCGGCTCTGCGGGCGAGC +
Preference number: 3 (lower is better)
Translates to: DHDDIGAAVISDVLAGLWSFRKP*AALRAS
Trigger: GCTCGCCCGCAGAGCCGCCAAGGGCTTCCTGAAGCT...CCAGAGGCCTGCCAGTACATCGCTTATGACTGCTGCGCCAATGTCATCATGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
3UTR CCA 72 bp GGCGCAGCAGTCATAAGCGATGTACTGGCAGGCCTCTaGGGAGCTGGTGGTGTAGATGCCAGTGACGATGCC +
Preference number: 3 (lower is better)
Translates to: GAAVISDVLAGL*GAGGVDASDDA
Trigger: GGCATCGTCACTGGCATCTACACCACCAGCTCCCCAGAGGCCTGCCAGTACATCGCTTATGACTGCTGCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
3UTR CCA 72 bp ACTCTCCACCCGAAATGGAGAAGTCTCTCTCGAGAATaGCCCACTTCTGGATGTGGTAGGGCCGGGCCGCCG +
Preference number: 3 (lower is better)
Translates to: TLHPKWRSLSRE*PTSGCGRAGPP
Trigger: CGGCGGCCCGGCCCTACCACATCCAGAAGTGGGCCATTCTCGAGAGAGACTTCTCCATTTCGGGTGGAGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560124.5
3UTR GCA 72 bp GCCAGTGACGATGCCACCTGCAAATACTGTGCCCACTaGCGAGAAGAACCACTCCGGGGAGTTGAAGCCGAG +
Preference number: 3 (lower is better)
Translates to: ASDDATCKYCAH*REEPLRGVEAE
Trigger: CTCGGCTTCAACTCCCCGGAGTGGTTCTTCTCGGCAGTGGGCACAGTATTTGCAGGTGGCATCGTCACTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
3UTR-3UTR CAA 90 bp AGTTTCATCGTGGGACCCAACTCTCCACCCGAAATGGAGAAGTCTCTCTCGAGACTCAGCATCACGCCCTaGGGGTTCCCAGTGGTGCCG +
Preference number: 3 (lower is better)
Translates to: SFIVGPNSPPEMEKSLSRLSITP*GFPVVP
Trigger: CGGCACCACTGGGAACCCCAAGGGCGTGATGCTGAG...TCTCGAGAGAGACTTCTCCATTTCGGGTGGAGAGTTGGGTCCCACGATGAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560124.5
3UTR CCA 72 bp TGTCTTGACTCAGCATCACGCCCTTGGGGTTCCCAGTaGTGCCGGAAGTGTAGACTAGCACACAGCACTGGT +
Preference number: 3 (lower is better)
Translates to: CLDSASRPWGSQ*CRKCRLAHSTG
Trigger: ACCAGTGCTGTGTGCTAGTCTACACTTCCGGCACCACTGGGAACCCCAAGGGCGTGATGCTGAGTCAAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559707.5
ENST00000560124.5
3UTR TCA 72 bp GAGCTTGAGCTTGGGCTTAGGCTTGGGCTCAGCTTTTaGCCCTCAGGCATCTCCTTTCCCTTCCTGTCTTCC +
Preference number: 3 (lower is better)
Translates to: ELELGLRLGLSF*PSGISFPFLSS
Trigger: GGAAGACAGGAAGGGAAAGGAGATGCCTGAGGGTCAAAAGCTGAGCCCAAGCCTAAGCCCAAGCTCAAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258873.9
3UTR TCA 72 bp CCTCACAAGTCTTGTCCTCCATGTTCAGGTAGCCCATaGATATGGTGCGGCCCCACAGGCAGATCTCGCCAA +
Preference number: 3 (lower is better)
Translates to: PHKSCPPCSGSP*IWCGPTGRSRQ
Trigger: TTGGCGAGATCTGCCTGTGGGGCCGCACCATATTCATGGGCTACCTGAACATGGAGGACAAGACTTGTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560124.5
3UTR CCA 72 bp GCTGCTTCCCGTATTCAGAATGGAAGTGGGGTGGTCTaGTGGCGACAGGCTAACGTAGAGCTGGCTGCTTTT +
Preference number: 3 (lower is better)
Translates to: AASRIQNGSGVV*WRQANVELAAF
Trigger: AAAAGCAGCCAGCTCTACGTTAGCCTGTCGCCACCAGACCACCCCACTTCCATTCTGAATACGGGAAGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258873.9
3UTR TCA 72 bp GCCCGCCAAGATTCCAGAGTAAGTCAGGTCGCTAGGTaGGTTGTGACTGATTGCTTTTCCTGCAGCGCACGT +
Preference number: 3 (lower is better)
Translates to: ARQDSRVSQVAR*VVTDCFSCSAR
Trigger: ACGTGCGCTGCAGGAAAAGCAATCAGTCACAACTCACCTAGCGACCTGACTTACTCTGGAATCTTGGCGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
3UTR GCA 72 bp GCGGATGTTGAGACCCAGGAAGAAGTGCTGTGTCTCTaGCATCATGGGGGCCGCTCCATAGAAGTTCTTTTG +
Preference number: 3 (lower is better)
Translates to: ADVETQEEVLCL*HHGGRSIEVLL
Trigger: CAAAAGAACTTCTATGGAGCGGCCCCCATGATGGCAGAGACACAGCACTTCTTCCTGGGTCTCAACATCCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559707.5
ENST00000560124.5
3UTR CCA 72 bp TCATGGGGGCCGCTCCATAGAAGTTCTTTTGACACTTaGCAAATCCCAGTGCCTGGCGAACCTTGGCTAGCA +
Preference number: 3 (lower is better)
Translates to: SWGPLHRSSFDT*QIPVPGEPWLA
Trigger: TGCTAGCCAAGGTTCGCCAGGCACTGGGATTTGCCAAGTGTCAAAAGAACTTCTATGGAGCGGCCCCCATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559707.5
ENST00000560124.5
3UTR CCA 72 bp TTCATGTTGACCCTCCGGATCCCCTCTTCGATGGCCTaGTACACGGCCTCATCCTTCTTCTCTATGATCTCG +
Preference number: 3 (lower is better)
Translates to: FMLTLRIPSSMA*YTASSFFSMIS
Trigger: CGAGATCATAGAGAAGAAGGATGAGGCCGTGTACCAGGCCATCGAAGAGGGGATCCGGAGGGTCAACATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560124.5
3UTR CCA 72 bp TCAGTTTCATCGTGGGACCCAACTCTCCACCCGAAATaGAGAAGTCTCTCTCGAGAATGGCCCACTTCTGGA +
Preference number: 3 (lower is better)
Translates to: SVSSWDPTLHPK*RSLSREWPTSG
Trigger: TCCAGAAGTGGGCCATTCTCGAGAGAGACTTCTCCATTTCGGGTGGAGAGTTGGGTCCCACGATGAAACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560124.5
3UTR-3UTR CAA 90 bp CAGACTGAAGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTGCAGAACTCCATAGCTaGTTCAGTCAGATTATCAGT +
Preference number: 3 (lower is better)
Translates to: QTEETWGSGRGSERLPSIAELHS*FSQIIS
Trigger: ACTGATAATCTGACTGAACAAGCTATGGAGTTCTGC...AATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCTTCAGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560124.5
3UTR-3UTR CAA 90 bp CTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTATAGAAACTGCAGGCATAATGCCTTCGGTCATTTaGGCTCAGCTTGCTACTGAG +
Preference number: 3 (lower is better)
Translates to: LRKRLGTPALYSIETAGIMPSVI*AQLATE
Trigger: CTCAGTAGCAAGCTGAGCCAAAATGACCGAAGGCAT...TATGCCTGCAGTTTCTATAGAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258873.9
3UTR GCA 72 bp TCGGTCATTTTGGCTCAGCTTGCTACTGAGAATGGCTaGTTCCCGTATTCAGAATGGAAGTGGGGTGGTCTG +
Preference number: 3 (lower is better)
Translates to: SVILAQLATENG*FPYSEWKWGGL
Trigger: CAGACCACCCCACTTCCATTCTGAATACGGGAAGCAGCCATTCTCAGTAGCAAGCTGAGCCAAAATGACCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258873.9
3UTR-3UTR CAA 90 bp GGACAGGAACTTCCTCTGGTCCCCAATGAGCATGGCGTTGCTGATGATGGGCAGCATTGGCCATCTTGTTaGGAGGAGGTTCTTTATATA +
Preference number: 3 (lower is better)
Translates to: GQELPLVPNEHGVADDGQHWPSC*EEVLYI
Trigger: TATATAAAGAACCTCCTCCAAACAAGATGGCCAATG...CTGCCCATCATCAGCAACGCCATGCTCATTGGGGACCAGAGGAAGTTCCTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560124.5
3UTR CCA 72 bp TCTACCTGTTTCCTGTTCAGATGCCTTCGGTCATTTTaGCTCAGCTTGCTACTGAGAATGGCTGCTTCCCGT +
Preference number: 3 (lower is better)
Translates to: STCFLFRCLRSF*LSLLLRMAASR
Trigger: ACGGGAAGCAGCCATTCTCAGTAGCAAGCTGAGCCAAAATGACCGAAGGCATCTGAACAGGAAACAGGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258873.9
3UTR CCA 72 bp TTGTTCAGTCAGATTATCAGTCTGGTCAGAGGTGTCTaGGTCCAGAGTGCACTTCAAGGTGAGCAGCATGGA +
Preference number: 3 (lower is better)
Translates to: LFSQIISLVRGV*VQSALQGEQHG
Trigger: TCCATGCTGCTCACCTTGAAGTGCACTCTGGACCCAGACACCTCTGACCAGACTGATAATCTGACTGAACAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560124.5
3UTR TCA 72 bp TCAGATGCCTTCGGTCATTTTGGCTCAGCTTGCTACTaGGAATGGCTGCTTCCCGTATTCAGAATGGAAGTG +
Preference number: 3 (lower is better)
Translates to: SDAFGHFGSACY*EWLLPVFRMEV
Trigger: CACTTCCATTCTGAATACGGGAAGCAGCCATTCTCAGTAGCAAGCTGAGCCAAAATGACCGAAGGCATCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258873.9
3UTR GCA 72 bp GCTGCTTTTATGAGAATGCGCCACTTGACCCCATCCTaGACCTTTGTTTATTCCAGGGCACTAATGGTCACT +
Preference number: 3 (lower is better)
Translates to: AAFMRMRHLTPS*TFVYSRALMVT
Trigger: AGTGACCATTAGTGCCCTGGAATAAACAAAGGTGCAGGATGGGGTCAAGTGGCGCATTCTCATAAAAGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258873.9
3UTR CCA 72 bp CAGAACTCCATAGCTTGTTCAGTCAGATTATCAGTCTaGTCAGAGGTGTCTGGGTCCAGAGTGCACTTCAAG +
Preference number: 3 (lower is better)
Translates to: QNSIACSVRLSV*SEVSGSRVHFK
Trigger: CTTGAAGTGCACTCTGGACCCAGACACCTCTGACCAGACTGATAATCTGACTGAACAAGCTATGGAGTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560124.5
3UTR-3UTR CAA 90 bp TCTTGTTTGGAGGAGGTTCTTTATATATCACGACTGCCTTTAGATGTGGCAACTGAGATGTGTTCCCACTaGTCCTGGCGCTTGAAGCCC +
Preference number: 3 (lower is better)
Translates to: SCLEEVLYISRLPLDVATEMCSH*SWRLKP
Trigger: GGGCTTCAAGCGCCAGGACAAGTGGGAACACATCTC...AGTTGCCACATCTAAAGGCAGTCGTGATATATAAAGAACCTCCTCCAAACAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
3UTR-3UTR CAA 90 bp CTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTATAGAAACTGCAGGCATATACACATTGGCCATCTaGTTTGGAGGAGGTTCTTTA +
Preference number: 3 (lower is better)
Translates to: LRKRLGTPALYSIETAGIYTLAI*FGGGSL
Trigger: TAAAGAACCTCCTCCAAACAAGATGGCCAATGTGTA...TATGCCTGCAGTTTCTATAGAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560124.5
3UTR-3UTR CAA 90 bp CTCAGACTTCACAGAGGAAATCTGTCGCCGAGTAAAAGATTTAGATTAACACTTGGCTTGAGCTTGAGCTaGGGCTTAGGCTTGGGCTCA +
Preference number: 3 (lower is better)
Translates to: LRLHRGNLSPSKRFRLTLGLSLS*GLGLGS
Trigger: TGAGCCCAAGCCTAAGCCCAAGCTCAAGCTCAAGCC...AAGTGTTAATCTAAATCTTTTACTCGGCGACAGATTTCCTCTGTGAAGTCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258873.9
3UTR TCA 72 bp CACCTTATTCTTTGCAGAGTGCTGTTGTATACACTATaGGATTGGATCCCGATCCTCCTGGGCTGGGTAGAT +
Preference number: 3 (lower is better)
Translates to: HLILCRVLLYTL*DWIPILLGWVD
Trigger: ATCTACCCAGCCCAGGAGGATCGGGATCCAATCTCATAGTGTATACAACAGCACTCTGCAAAGAATAAGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258873.9
3UTR-3UTR CAA 90 bp CTCAGACTTCACAGAGGAAATCTGTCGCCGAGTAAAAGATTTAGATTAACACTTATGCCATGCTGGGGCTaGAGCTTGAGCTTGGGCTTA +
Preference number: 3 (lower is better)
Translates to: LRLHRGNLSPSKRFRLTLMPCWG*SLSLGL
Trigger: TAAGCCCAAGCTCAAGCTCAAGCCCCAGCATGGCAT...AAGTGTTAATCTAAATCTTTTACTCGGCGACAGATTTCCTCTGTGAAGTCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258873.9
3UTR GCA 72 bp GAGATGTTTGCTTTCTCTACCTGTTTCCTGTTCAGATaGCTTCGGTCATTTTGGCTCAGCTTGCTACTGAGA +
Preference number: 3 (lower is better)
Translates to: EMFAFSTCFLFR*LRSFWLSLLLR
Trigger: TCTCAGTAGCAAGCTGAGCCAAAATGACCGAAGGCATCTGAACAGGAAACAGGTAGAGAAAGCAAACATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258873.9
3UTR-3UTR CAA 90 bp CTCAGACTTCACAGAGGAAATCTGTCGCCGAGTAAAAGATTTAGATTAACACTTATGAGAATGCGCCACTaGACCCCATCCTGCACCTTT +
Preference number: 3 (lower is better)
Translates to: LRLHRGNLSPSKRFRLTLMRMRH*TPSCTF
Trigger: AAAGGTGCAGGATGGGGTCAAGTGGCGCATTCTCAT...AAGTGTTAATCTAAATCTTTTACTCGGCGACAGATTTCCTCTGTGAAGTCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258873.9
3UTR GCA 72 bp TCCCTTTGCATCAAGAGCACCTTATTCTTTGCAGAGTaGTGTTGTATACACTATGAGATTGGATCCCGATCC +
Preference number: 3 (lower is better)
Translates to: SLCIKSTLFFAE*CCIHYEIGSRS
Trigger: GGATCGGGATCCAATCTCATAGTGTATACAACAGCACTCTGCAAAGAATAAGGTGCTCTTGATGCAAAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258873.9
3UTR GCA 72 bp TTGTGTGAACAAAGGGAAAATTTTGGTAAAGCTCCCTaGCTCCCTTTGCATCAAGAGCACCTTATTCTTTGC +
Preference number: 3 (lower is better)
Translates to: LCEQRENFGKAP*LPLHQEHLILC
Trigger: GCAAAGAATAAGGTGCTCTTGATGCAAAGGGAGGCAGGGAGCTTTACCAAAATTTTCCCTTTGTTCACACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258873.9
3UTR-3UTR CAA 90 bp GTATTTGTGTCCCAGCCTCCAAAAATAGATCAGATACAAAAATTAGTTGGGTATTCATTTTGGCTCAGCTaGCTACTGAGAATGGCTGCT +
Preference number: 3 (lower is better)
Translates to: VFVSQPPKIDQIQKLVGYSFWLS*LLRMAA
Trigger: AGCAGCCATTCTCAGTAGCAAGCTGAGCCAAAATGA...ATACCCAACTAATTTTTGTATCTGATCTATTTTTGGAGGCTGGGACACAAATAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000258873.9
3UTR-3UTR CAA 90 bp AGAGAGGTGCCTGAATTACATAGTGGGCCCTTTTATTGTGTAGGATGGAAAGATATATTTCTTTCGTATTaGTGTCCCAGCCTCCAAAAA +
Preference number: 3 (lower is better)
Translates to: REVPELHSGPFYCVGWKDIFLSY*CPSLQK
Trigger: TTTTTGGAGGCTGGGACACAAATACGAAAGAAATAT...ATCTTTCCATCCTACACAATAAAAGGGCCCACTATGTAATTCAGGCACCTCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258873.9
3UTR CCA 72 bp ACTTCTACAACTGGCATTTACATCAGTCACTCTAAATaGACACCACATGAACCTCTGTTTAGAATACCTACG +
Preference number: 3 (lower is better)
Translates to: TSTTGIYISHSK*TPHEPLFRIPT
Trigger: CGTAGGTATTCTAAACAGAGGTTCATGTGGTGTCCATTTAGAGTGACTGATGTAAATGCCAGTTGTAGAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258873.9
3UTR TCA 72 bp CAAAAATTATCAGCCCTTTCGTTCTGGAAGGAGAGCTaGTCTCATTTGTCACCTGAACAAAAAGCAATACTT +
Preference number: 3 (lower is better)
Translates to: QKLSALSFWKES*SHLSPEQKAIL
Trigger: AAGTATTGCTTTTTGTTCAGGTGACAAATGAGATCAGCTCTCCTTCCAGAACGAAAGGGCTGATAATTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
3UTR CCA 72 bp CCAGGTGGCATCTCACTGAGGGCTTTAAAATCTCCTTaGTTTAGTTTAGTTTGCGGATACATCTTTTATTTT +
Preference number: 3 (lower is better)
Translates to: PGGISLRALKSP*FSLVCGYIFYF
Trigger: AAAATAAAAGATGTATCCGCAAACTAAACTAAACCAAGGAGATTTTAAAGCCCTCAGTGAGATGCCACCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR GCA 90 bp CTCCTGCTGGACTTCTGCCGGCCGGATGTCACCGGCCTGGCTGCCGTACCGTGCTGTCACCGGCCTGGCTaGCGTACCGTGCCGTCCACG +
Preference number: 4 (lower is better)
Translates to: LLLDFCRPDVTGLAAVPCCHRPG*RTVPST
Trigger: CGTGGACGGCACGGTACGGCAGCCAGGCCGGTGACA...GCACGGTACGGCAGCCAGGCCGGTGACATCCGGCCGGCAGAAGTCCAGCAGGAG
70% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559707.5
ENST00000560124.5
CDS-3UTR TCA 90 bp ACCCGGGGCACCCCCATGTGTGATGTGGGCTCCACCTCCCGCAGCGTGTTCACCCGCTGCCGGGGCAGGTaGGGTTCTGCTCCAAGGTCA +
Preference number: 4 (lower is better)
Translates to: TRGTPMCDVGSTSRSVFTRCRGR*GSAPRS
Trigger: TGACCTTGGAGCAGAACCTCACCTGCCCCGGCAGCG...GGTGAACACGCTGCGGGAGGTGGAGCCCACATCACACATGGGGGTGCCCCGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000559707.5
ENST00000560124.5
CDS-3UTR GCA 90 bp CACCTCCTGCTGGACTTCTGCCGGCCGGATGTCACCGGCCTGGCTGCCGTACCGAGCCCTTGGCGGCTCTaGGGGCGAGCAGGTAGTATT +
Preference number: 4 (lower is better)
Translates to: HLLLDFCRPDVTGLAAVPSPWRL*GRAGSI
Trigger: AATACTACCTGCTCGCCCGCAGAGCCGCCAAGGGCT...CGGTACGGCAGCCAGGCCGGTGACATCCGGCCGGCAGAAGTCCAGCAGGAGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559707.5
CDS-3UTR GCA 90 bp ATCTTCTCCCATACCCGGGGCACCCCCATGTGTGATGTGGGCTCCACCTCCCGCCTCTGCTGTCCAGCATaGTGGGGTCCCCGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: IFSHTRGTPMCDVGSTSRLCCPA*WGPRVG
Trigger: GCCCACACGGGGACCCCAGCATGCTGGACAGCAGAG...GCGGGAGGTGGAGCCCACATCACACATGGGGGTGCCCCGGGTATGGGAGAAGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000559707.5
ENST00000560124.5
CDS-3UTR GCA 90 bp TCCCATACCCGGGGCACCCCCATGTGTGATGTGGGCTCCACCTCCCGCAGCGTGCCTGTGGGGTCTCTCTaGTGTCCAGCATGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: SHTRGTPMCDVGSTSRSVPVGSL*CPACWG
Trigger: ACCCCAGCATGCTGGACAGCAGAGAGACCCCACAGG...CACGCTGCGGGAGGTGGAGCCCACATCACACATGGGGGTGCCCCGGGTATGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000559707.5
ENST00000560124.5
CDS-3UTR CCA 90 bp CACTCCGGGGAGTTGAAGCCGAGGATGGCCACACTGTGGGCCTGCTTCAGGCCGGAAGCTGTGGGCAGCTaGGGTCTATGCGCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: HSGELKPRMATLWACFRPEAVGS*GLCAGA
Trigger: TGCGCCTGCGCATAGACCCCAGCTGCCCACAGCTTC...CGGCCTGAAGCAGGCCCACAGTGTGGCCATCCTCGGCTTCAACTCCCCGGAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
CDS-3UTR CCA 90 bp CGCAGGCGCACCCGCCCATCGGCCCGAGTCGTCCACAGCGCCTCCTCTGATTTCAGTGTAGGGAAGCTGTaGGCAGCTGGGGTCTATGCG +
Preference number: 4 (lower is better)
Translates to: RRRTRPSARVVHSASSDFSVGKL*AAGVYA
Trigger: CGCATAGACCCCAGCTGCCCACAGCTTCCCTACACT...GAAATCAGAGGAGGCGCTGTGGACGACTCGGGCCGATGGGCGGGTGCGCCTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557935.1
CDS-3UTR CCA 90 bp CTCCTGCTGGACTTCTGCCGGCCGGATGTCACCGGCCTGGCTGCCGTACCGTGCGTACTGGCAGGCCTCTaGGGAGCTGGTGGTGTAGAT +
Preference number: 4 (lower is better)
Translates to: LLLDFCRPDVTGLAAVPCVLAGL*GAGGVD
Trigger: ATCTACACCACCAGCTCCCCAGAGGCCTGCCAGTAC...GCACGGTACGGCAGCCAGGCCGGTGACATCCGGCCGGCAGAAGTCCAGCAGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559707.5
CDS-3UTR TCA 90 bp CTCCATCTTCACGGCCTCCTCGATGGGCACAGGGGGCACATTCTCCCCACCAGCGGCCTGAGGTCTCACTaGGGCCGTAGCCCGCATACA +
Preference number: 4 (lower is better)
Translates to: LHLHGLLDGHRGHILPTSGLRSH*GRSPHT
Trigger: TGTATGCGGGCTACGGCCTCAGTGAGACCTCAGGCC...GCTGGTGGGGAGAATGTGCCCCCTGTGCCCATCGAGGAGGCCGTGAAGATGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560124.5
CDS-3UTR TCA 90 bp ACCTCCTGCTGGACTTCTGCCGGCCGGATGTCACCGGCCTGGCTGCCGTACCGTTGTAGGGACTGGACATaGAGTGGGGGCCTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: TSCWTSAGRMSPAWLPYRCRDWT*SGGLRS
Trigger: AGACCTCAGGCCCCCACTTCATGTCCAGTCCCTACA...ACGGTACGGCAGCCAGGCCGGTGACATCCGGCCGGCAGAAGTCCAGCAGGAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559707.5
ENST00000560124.5
CDS-3UTR GCA 90 bp TCCCATACCCGGGGCACCCCCATGTGTGATGTGGGCTCCACCTCCCGCAGCGTGCTGGCTGCCGTACCGTaGCGTCCACGTGATATTGTC +
Preference number: 4 (lower is better)
Translates to: SHTRGTPMCDVGSTSRSVLAAVP*RPRDIV
Trigger: GACAATATCACGTGGACGGCACGGTACGGCAGCCAG...CACGCTGCGGGAGGTGGAGCCCACATCACACATGGGGGTGCCCCGGGTATGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559707.5
ENST00000560124.5
CDS-3UTR GCA 90 bp CACCTCCTGGATGCGCTCCATGATCTTCTCCCATACCCGGGGCACCCCCATGTGCTCCTGCTGGACTTCTaGCGGCCGGATGTCACCGGC +
Preference number: 4 (lower is better)
Translates to: HLLDALHDLLPYPGHPHVLLLDF*RPDVTG
Trigger: GCCGGTGACATCCGGCCGGCAGAAGTCCAGCAGGAG...CACATGGGGGTGCCCCGGGTATGGGAGAAGATCATGGAGCGCATCCAGGAGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559707.5
ENST00000560124.5
CDS-3UTR CCA 90 bp CACCTCCTGGATGCGCTCCATGATCTTCTCCCATACCCGGGGCACCCCCATGTGGCTTCAGGAAGCCCTTaGCGGCTCTGCGGGCGAGCA +
Preference number: 4 (lower is better)
Translates to: HLLDALHDLLPYPGHPHVASGSP*RLCGRA
Trigger: TGCTCGCCCGCAGAGCCGCCAAGGGCTTCCTGAAGC...CACATGGGGGTGCCCCGGGTATGGGAGAAGATCATGGAGCGCATCCAGGAGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559707.5
CDS-3UTR CCA 90 bp ATCTTCTCCCATACCCGGGGCACCCCCATGTGTGATGTGGGCTCCACCTCCCGCAGGATGGCCACACTGTaGGCCTGCTTCAGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: IFSHTRGTPMCDVGSTSRRMATL*ACFRPS
Trigger: GCTCGGCCTGAAGCAGGCCCACAGTGTGGCCATCCT...GCGGGAGGTGGAGCCCACATCACACATGGGGGTGCCCCGGGTATGGGAGAAGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559707.5
CDS-3UTR GCA 90 bp GGCGGCTCTGCGGGCGAGCAGGTAGTATTGGGAGTAGGAGATGTGTTCCCACTTGGCAGCTGGGGTCTATaGGCAGGCGCACCCGCCCAT +
Preference number: 4 (lower is better)
Translates to: GGSAGEQVVLGVGDVFPLGSWGL*AGAPAH
Trigger: ATGGGCGGGTGCGCCTGCGCATAGACCCCAGCTGCC...AAGTGGGAACACATCTCCTACTCCCAATACTACCTGCTCGCCCGCAGAGCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
CDS-3UTR GCA 90 bp AGCCCTTGGCGGCTCTGCGGGCGAGCAGGTAGTATTGGGAGTAGGAGATGTGTTTGTCACCGGCCTGGCTaGCGTACCGTGCCGTCCACG +
Preference number: 4 (lower is better)
Translates to: SPWRLCGRAGSIGSRRCVCHRPG*RTVPST
Trigger: CGTGGACGGCACGGTACGGCAGCCAGGCCGGTGACA...AACACATCTCCTACTCCCAATACTACCTGCTCGCCCGCAGAGCCGCCAAGGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559707.5
CDS-3UTR CCA 90 bp CACCTCCTGGATGCGCTCCATGATCTTCTCCCATACCCGGGGCACCCCCATGTGGAAGCTGTGGGCAGCTaGGGTCTATGCGCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: HLLDALHDLLPYPGHPHVEAVGS*GLCAGA
Trigger: TGCGCCTGCGCATAGACCCCAGCTGCCCACAGCTTC...CACATGGGGGTGCCCCGGGTATGGGAGAAGATCATGGAGCGCATCCAGGAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559707.5
CDS-3UTR CCA 90 bp GCAGGCGCACCCGCCCATCGGCCCGAGTCGTCCACAGCGCCTCCTCTGATTTCATGTTCCCACTTGTCCTaGCGCTTGAAGCCCAAAGCG +
Preference number: 4 (lower is better)
Translates to: AGAPAHRPESSTAPPLISCSHLS*RLKPKA
Trigger: CGCTTTGGGCTTCAAGCGCCAGGACAAGTGGGAACA...TGAAATCAGAGGAGGCGCTGTGGACGACTCGGGCCGATGGGCGGGTGCGCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557935.1
CDS-3UTR CCA 90 bp CAGACTGAAGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCGGATGTCACCGGCCTaGCTGCCGTACCGTGCCGTC +
Preference number: 4 (lower is better)
Translates to: QTEETWGSGRGSERLPSIRMSPA*LPYRAV
Trigger: GACGGCACGGTACGGCAGCCAGGCCGGTGACATCCG...AATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCTTCAGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR TCA 90 bp CAGCATCTTTCGCCGGATGAAGCCAGACTGAGCCGCCACCTCCTGGATGCGCTCGCATCTTTCGCCGGATaGAGCCAGACTGAGCCGCCA +
Preference number: 4 (lower is better)
Translates to: QHLSPDEARLSRHLLDALASFAG*SQTEPP
Trigger: TGGCGGCTCAGTCTGGCTTCATCCGGCGAAAGATGC...GAGCGCATCCAGGAGGTGGCGGCTCAGTCTGGCTTCATCCGGCGAAAGATGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559707.5
ENST00000560124.5
CDS-3UTR TCA 90 bp AGACTGAAGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCCGCTGCCGGGGCAGGTaGGGTTCTGCTCCAAGGTCA +
Preference number: 4 (lower is better)
Translates to: RLKRPGAQEEARNACPLFRCRGR*GSAPRS
Trigger: TGACCTTGGAGCAGAACCTCACCTGCCCCGGCAGCG...GAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCTTCAGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR GCA 90 bp GGCGGCTCTGCGGGCGAGCAGGTAGTATTGGGAGTAGGAGATGTGTTCCCACTTCTCTGCTGTCCAGCATaGTGGGGTCCCCGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: GGSAGEQVVLGVGDVFPLLCCPA*WGPRVG
Trigger: GCCCACACGGGGACCCCAGCATGCTGGACAGCAGAG...AAGTGGGAACACATCTCCTACTCCCAATACTACCTGCTCGCCCGCAGAGCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
CDS-3UTR GCA 90 bp TGTGCCCAGACTGAAGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCCTCACAATCATGTCCTaGCGGCTCTCCTGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: CAQTEETWGSGRGSERLPLTIMS*RLSCGV
Trigger: GACCCCACAGGAGAGCCGGCAGGACATGATTGTGAG...GGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCTTCAGTCTGGGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258873.9
ENST00000560124.5
CDS-3UTR GCA 90 bp CCAGTGACGATGCCACCTGCAAATACTGTGCCCACTGCCGAGAAGAACCACTCCGGCAGCTGGGGTCTATaGGCAGGCGCACCCGCCCAT +
Preference number: 4 (lower is better)
Translates to: PVTMPPANTVPTAEKNHSGSWGL*AGAPAH
Trigger: ATGGGCGGGTGCGCCTGCGCATAGACCCCAGCTGCC...GGAGTGGTTCTTCTCGGCAGTGGGCACAGTATTTGCAGGTGGCATCGTCACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
CDS-3UTR GCA 90 bp GCACCCGCCCATCGGCCCGAGTCGTCCACAGCGCCTCCTCTGATTTCAAGATTTGCCACACTGTGGGCCTaGTTCAGGCCGAGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: APAHRPESSTAPPLISRFATLWA*FRPSFR
Trigger: CCTGAAGCTCGGCCTGAAGCAGGCCCACAGTGTGGC...AAATCTTGAAATCAGAGGAGGCGCTGTGGACGACTCGGGCCGATGGGCGGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557935.1
CDS-3UTR GCA 90 bp TGTGCCCAGACTGAAGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCGGGCAGGTGAGGTTCTaGTCCAAGGTCACCGACATG +
Preference number: 4 (lower is better)
Translates to: CAQTEETWGSGRGSERLPGQVRF*SKVTDM
Trigger: CATGTCGGTGACCTTGGAGCAGAACCTCACCTGCCC...GGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCTTCAGTCTGGGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp CTCCATCTTCACGGCCTCCTCGATGGGCACAGGGGGCACATTCTCCCCACCAGCAGCTCCAGAATTGCGTaGCATCTGCCTCGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: LHLHGLLDGHRGHILPTSSSRIA*HLPRAS
Trigger: GGAAGCCCGAGGCAGATGCCACGCAATTCTGGAGCT...GCTGGTGGGGAGAATGTGCCCCCTGTGCCCATCGAGGAGGCCGTGAAGATGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560124.5
CDS-3UTR CCA 90 bp CACCTCCTGGATGCGCTCCATGATCTTCTCCCATACCCGGGGCACCCCCATGTGACTACCACCTCCTGCTaGACTTCTGCCGGCCGGATG +
Preference number: 4 (lower is better)
Translates to: HLLDALHDLLPYPGHPHVTTTSC*TSAGRM
Trigger: CATCCGGCCGGCAGAAGTCCAGCAGGAGGTGGTAGT...CACATGGGGGTGCCCCGGGTATGGGAGAAGATCATGGAGCGCATCCAGGAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559707.5
ENST00000560124.5
CDS-3UTR CCA 90 bp GCCGTACCGTGCCGTCCACGTGATATTGTCTTGACTCAGCATCACGCCCTTGGGCCCCCATGTGTGATGTaGGCTCCACCTCCCGCAGCG +
Preference number: 4 (lower is better)
Translates to: AVPCRPRDIVLTQHHALGPPCVM*APPPAA
Trigger: CGCTGCGGGAGGTGGAGCCCACATCACACATGGGGG...CCCAAGGGCGTGATGCTGAGTCAAGACAATATCACGTGGACGGCACGGTACGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559707.5
ENST00000560124.5
CDS-3UTR CCA 90 bp TCCCATACCCGGGGCACCCCCATGTGTGATGTGGGCTCCACCTCCCGCAGCGTGCTGGTCAGAGGTGTCTaGGTCCAGAGTGCACTTCAA +
Preference number: 4 (lower is better)
Translates to: SHTRGTPMCDVGSTSRSVLVRGV*VQSALQ
Trigger: TTGAAGTGCACTCTGGACCCAGACACCTCTGACCAG...CACGCTGCGGGAGGTGGAGCCCACATCACACATGGGGGTGCCCCGGGTATGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560124.5
3UTR CAA 72 bp ACTGTGCCCACTGCCGAGAAGAACCACTCCGGGGAGTaGAAGCCGAGGATGGCCACACTGTGGGCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: TVPTAEKNHSGE*KPRMATLWACF
Trigger: GAAGCAGGCCCACAGTGTGGCCATCCTCGGCTTCAACTCCCCGGAGTGGTTCTTCTCGGCAGTGGGCACAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
CDS-3UTR TCA 90 bp AGACTGAAGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCCGGATGAAGCCAGACTaGGCCGCCACCTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: RLKRPGAQEEARNACPLFRMKPD*AATSWM
Trigger: CATCCAGGAGGTGGCGGCTCAGTCTGGCTTCATCCG...GAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCTTCAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR TCA 90 bp AAGAACCACTCCGGGGAGTTGAAGCCGAGGATGGCCACACTGTGGGCCTGCTTCCTGCCAGTCTGGTTGTaGAGGGCTTCAGGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: KNHSGELKPRMATLWACFLPVWL*RASGRC
Trigger: GCAGCGACCTGAAGCCCTTCACAACCAGACTGGCAG...GAAGCAGGCCCACAGTGTGGCCATCCTCGGCTTCAACTCCCCGGAGTGGTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559707.5
CDS-3UTR TCA 90 bp GCCCACTGCCGAGAAGAACCACTCCGGGGAGTTGAAGCCGAGGATGGCCACACTTGTAGGGACTGGACATaGAGTGGGGGCCTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: AHCREEPLRGVEAEDGHTCRDWT*SGGLRS
Trigger: AGACCTCAGGCCCCCACTTCATGTCCAGTCCCTACA...AGTGTGGCCATCCTCGGCTTCAACTCCCCGGAGTGGTTCTTCTCGGCAGTGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559707.5
CDS-3UTR TCA 90 bp CAATGCCCTCTGCGTCCTGGTTCACCAGCTTCACCCGACAGCCGGGCACCAACTGCCAGTGCTGTGCCCTaGCCTGGAGATCTAACAGAC +
Preference number: 4 (lower is better)
Translates to: QCPLRPGSPASPDSRAPTASAVP*PGDLTD
Trigger: GTCTGTTAGATCTCCAGGTCAGGGCACAGCACTGGC...AGTTGGTGCCCGGCTGTCGGGTGAAGCTGGTGAACCAGGACGCAGAGGGCATTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560124.5
CDS-3UTR GCA 90 bp GGTCACTCGCATGCCCGCTGTGCACAGTCCTGTGAGTTAAATGCCCACTACTCTGGCAGCTGGGGTCTATaGGCAGGCGCACCCGCCCAT +
Preference number: 4 (lower is better)
Translates to: GHSHARCAQSCELNAHYSGSWGL*AGAPAH
Trigger: ATGGGCGGGTGCGCCTGCGCATAGACCCCAGCTGCC...AGAGTAGTGGGCATTTAACTCACAGGACTGTGCACAGCGGGCATGCGAGTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR GCA 90 bp CTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTATAGAAACTGCATGTCACCGGCCTGGCTaGCGTACCGTGCCGTCCACG +
Preference number: 4 (lower is better)
Translates to: LGLRKRLGTPALYSIETACHRPG*RTVPST
Trigger: CGTGGACGGCACGGTACGGCAGCCAGGCCGGTGACA...TGCAGTTTCTATAGAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp CAGACTGAAGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTGCCGGCTCTCCTGTaGGGTCTCTCTGCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: QTEETWGSGRGSERLPSILPALL*GLSAVQ
Trigger: CTGGACAGCAGAGAGACCCCACAGGAGAGCCGGCAG...AATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCTTCAGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258873.9
ENST00000560124.5
CDS-3UTR CCA 90 bp TTGTCCTGGCGCTTGAAGCCCAAAGCGATGAGGTCCCCATACTTATCCAGGGCCGCTTCAGGAAGCCCTTaGCGGCTCTGCGGGCGAGCA +
Preference number: 4 (lower is better)
Translates to: LSWRLKPKAMRSPYLSRAASGSP*RLCGRA
Trigger: TGCTCGCCCGCAGAGCCGCCAAGGGCTTCCTGAAGC...GGCCCTGGATAAGTATGGGGACCTCATCGCTTTGGGCTTCAAGCGCCAGGACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557935.1
CDS-3UTR CCA 90 bp CTTGGCGGCTCTGCGGGCGAGCAGGTAGTATTGGGAGTAGGAGATGTGTTCCCAAGGATGGCCACACTGTaGGCCTGCTTCAGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: LGGSAGEQVVLGVGDVFPRMATL*ACFRPS
Trigger: GCTCGGCCTGAAGCAGGCCCACAGTGTGGCCATCCT...TGGGAACACATCTCCTACTCCCAATACTACCTGCTCGCCCGCAGAGCCGCCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
CDS-3UTR CCA 90 bp TGTGCCCAGACTGAAGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCACTAGCACACAGCACTaGTTGGGCTGCTGGGTGTCA +
Preference number: 4 (lower is better)
Translates to: CAQTEETWGSGRGSERLPTSTQH*LGCWVS
Trigger: TGACACCCAGCAGCCCAACCAGTGCTGTGTGCTAGT...GGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCTTCAGTCTGGGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp TCCAAGGTCACCGACATGGCCCACAGCAGCATCTTTCGCCGGATGAAGCCAGACTCAGCATCACGCCCTTaGGGTTCCCAGTGGTGCCGG +
Preference number: 4 (lower is better)
Translates to: SKVTDMAHSSIFRRMKPDSASRP*GSQWCR
Trigger: CCGGCACCACTGGGAACCCCAAGGGCGTGATGCTGA...GTCTGGCTTCATCCGGCGAAAGATGCTGCTGTGGGCCATGTCGGTGACCTTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559707.5
ENST00000560124.5
CDS-3UTR CCA 90 bp TCTGCGGGCGAGCAGGTAGTATTGGGAGTAGGAGATGTGTTCCCACTTGTCCTGCGGATGTCACCGGCCTaGCTGCCGTACCGTGCCGTC +
Preference number: 4 (lower is better)
Translates to: SAGEQVVLGVGDVFPLVLRMSPA*LPYRAV
Trigger: GACGGCACGGTACGGCAGCCAGGCCGGTGACATCCG...CAGGACAAGTGGGAACACATCTCCTACTCCCAATACTACCTGCTCGCCCGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559707.5
CDS-3UTR CCA 90 bp AGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTATAGAACGGATGTCACCGGCCTaGCTGCCGTACCGTGCCGTC +
Preference number: 4 (lower is better)
Translates to: RDLGLRKRLGTPALYSIERMSPA*LPYRAV
Trigger: GACGGCACGGTACGGCAGCCAGGCCGGTGACATCCG...TTCTATAGAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp TGTGCCCAGACTGAAGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCGTGCCTGGCGAACCTTaGCTAGCACCAGGTAATCTG +
Preference number: 4 (lower is better)
Translates to: CAQTEETWGSGRGSERLPVPGEP*LAPGNL
Trigger: CAGATTACCTGGTGCTAGCCAAGGTTCGCCAGGCAC...GGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCTTCAGTCTGGGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp AGCCGCCACCTCCTGGATGCGCTCCATGATCTTCTCCCATACCCGGGGCACCCCAAGCATCAAGTCAGTTaGCATGTGGGTGGCGGAGTG +
Preference number: 4 (lower is better)
Translates to: SRHLLDALHDLLPYPGHPKHQVS*HVGGGV
Trigger: CACTCCGCCACCCACATGCCAACTGACTTGATGCTT...GGGGTGCCCCGGGTATGGGAGAAGATCATGGAGCGCATCCAGGAGGTGGCGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560124.5
3UTR CAA 72 bp GAAGCCCTTGGCGGCTCTGCGGGCGAGCAGGTAGTATaGGGAGTAGGAGATGTGTTCCCACTTGTCCTGGCG +
Preference number: 4 (lower is better)
Translates to: EALGGSAGEQVV*GVGDVFPLVLA
Trigger: CGCCAGGACAAGTGGGAACACATCTCCTACTCCCAATACTACCTGCTCGCCCGCAGAGCCGCCAAGGGCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
CDS-3UTR TCA 90 bp CTTGGCGGCTCTGCGGGCGAGCAGGTAGTATTGGGAGTAGGAGATGTGTTCCCACCTGGATGCGCTCCATaGTCTTCTCCCATACCCGGG +
Preference number: 4 (lower is better)
Translates to: LGGSAGEQVVLGVGDVFPPGCAP*SSPIPG
Trigger: CCCGGGTATGGGAGAAGATCATGGAGCGCATCCAGG...TGGGAACACATCTCCTACTCCCAATACTACCTGCTCGCCCGCAGAGCCGCCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559707.5
CDS-3UTR TCA 90 bp CCAGTGACGATGCCACCTGCAAATACTGTGCCCACTGCCGAGAAGAACCACTCCCGGATGAAGCCAGACTaGGCCGCCACCTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: PVTMPPANTVPTAEKNHSRMKPD*AATSWM
Trigger: CATCCAGGAGGTGGCGGCTCAGTCTGGCTTCATCCG...GGAGTGGTTCTTCTCGGCAGTGGGCACAGTATTTGCAGGTGGCATCGTCACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559707.5
CDS-3UTR TCA 90 bp AGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTATAGAACGCTGCCGGGGCAGGTaGGGTTCTGCTCCAAGGTCA +
Preference number: 4 (lower is better)
Translates to: RDLGLRKRLGTPALYSIERCRGR*GSAPRS
Trigger: TGACCTTGGAGCAGAACCTCACCTGCCCCGGCAGCG...TTCTATAGAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR TCA 90 bp GCTGGTGGTGTAGATGCCAGTGACGATGCCACCTGCAAATACTGTGCCCACTGCGGCCTGAGGTCTCACTaGGGCCGTAGCCCGCATACA +
Preference number: 4 (lower is better)
Translates to: AGGVDASDDATCKYCAHCGLRSH*GRSPHT
Trigger: TGTATGCGGGCTACGGCCTCAGTGAGACCTCAGGCC...GCAGTGGGCACAGTATTTGCAGGTGGCATCGTCACTGGCATCTACACCACCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559707.5
CDS-3UTR TCA 90 bp AGACTGAAGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCCATGAAGTGGGGGCCTaGGGTCTCACTGAGGCCGTA +
Preference number: 4 (lower is better)
Translates to: RLKRPGAQEEARNACPLFHEVGA*GLTEAV
Trigger: TACGGCCTCAGTGAGACCTCAGGCCCCCACTTCATG...GAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCTTCAGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR TCA 90 bp CAGACTGAAGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCATGAAGTGGGGGCCTaGGGTCTCACTGAGGCCGTA +
Preference number: 4 (lower is better)
Translates to: QTEETWGSGRGSERLPSIHEVGA*GLTEAV
Trigger: TACGGCCTCAGTGAGACCTCAGGCCCCCACTTCATG...AATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCTTCAGTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR TCA 90 bp CAATGCCCTCTGCGTCCTGGTTCACCAGCTTCACCCGACAGCCGGGCACCAACTTGTTCAGGTAGCCCATaGATATGGTGCGGCCCCACA +
Preference number: 4 (lower is better)
Translates to: QCPLRPGSPASPDSRAPTCSGSP*IWCGPT
Trigger: TGTGGGGCCGCACCATATTCATGGGCTACCTGAACA...AGTTGGTGCCCGGCTGTCGGGTGAAGCTGGTGAACCAGGACGCAGAGGGCATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560124.5
CDS-3UTR TCA 90 bp GGCCTGGTACACGGCCTCATCCTTCTTCTCTATGATCTCGGACACTGTGGTGGCCCGCCGCGTTCATGTTaGCCCTCCGGATCCCCTCTT +
Preference number: 4 (lower is better)
Translates to: GLVHGLILLLYDLGHCGGPPRSC*PSGSPL
Trigger: AAGAGGGGATCCGGAGGGTCAACATGAACGCGGCGG...GCCACCACAGTGTCCGAGATCATAGAGAAGAAGGATGAGGCCGTGTACCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560124.5
CDS-3UTR GCA 90 bp CACCTCCTGGATGCGCTCCATGATCTTCTCCCATACCCGGGGCACCCCCATGTGGAATTGCGTGGCATCTaGCTCGGGCTTCCACTGAAG +
Preference number: 4 (lower is better)
Translates to: HLLDALHDLLPYPGHPHVELRGI*LGLPLK
Trigger: CTTCAGTGGAAGCCCGAGGCAGATGCCACGCAATTC...CACATGGGGGTGCCCCGGGTATGGGAGAAGATCATGGAGCGCATCCAGGAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559707.5
ENST00000560124.5
CDS-3UTR CCA 90 bp TTGAGCTTGGGCTTAGGCTTGGGCTCAGCTTTTGACCCTCAGGCATCTCCTTTCGCTGGGGTCCCCGTGTaGGCAGCCGTATCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LSLGLGLGSAFDPQASPFAGVPV*AAVSSS
Trigger: GGAGCTGGATACGGCTGCCCACACGGGGACCCCAGC...GAAAGGAGATGCCTGAGGGTCAAAAGCTGAGCCCAAGCCTAAGCCCAAGCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CCA 90 bp CCAGGAAGAAGTGCTGTGTCTCTGCCATCATGGGGGCCGCTCCATAGAAGTTCTTGCTGTCCAGCATGCTaGGGTCCCCGTGTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: PGRSAVSLPSWGPLHRSSCCPAC*GPRVGS
Trigger: GCTGCCCACACGGGGACCCCAGCATGCTGGACAGCA...AGAACTTCTATGGAGCGGCCCCCATGATGGCAGAGACACAGCACTTCTTCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559707.5
ENST00000560124.5
CDS-3UTR CCA 90 bp CAGACTGAAGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTACTACCACCTCCTGCTaGACTTCTGCCGGCCGGATG +
Preference number: 4 (lower is better)
Translates to: QTEETWGSGRGSERLPSITTTSC*TSAGRM
Trigger: CATCCGGCCGGCAGAAGTCCAGCAGGAGGTGGTAGT...AATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCTTCAGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp AGACTGAAGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCACTACCACCTCCTGCTaGACTTCTGCCGGCCGGATG +
Preference number: 4 (lower is better)
Translates to: RLKRPGAQEEARNACPLFTTTSC*TSAGRM
Trigger: CATCCGGCCGGCAGAAGTCCAGCAGGAGGTGGTAGT...GAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCTTCAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp CTTGTCCTCCATGTTCAGGTAGCCCATGAATATGGTGCGGCCCCACAGGCAGATCCCCCATGTGTGATGTaGGCTCCACCTCCCGCAGCG +
Preference number: 4 (lower is better)
Translates to: LVLHVQVAHEYGAAPQADPPCVM*APPPAA
Trigger: CGCTGCGGGAGGTGGAGCCCACATCACACATGGGGG...ATCTGCCTGTGGGGCCGCACCATATTCATGGGCTACCTGAACATGGAGGACAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560124.5
CDS-3UTR TCA 90 bp CTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTATAGAAACTGCAACCACTCCGGGGAGTTaGAGCCGAGGATGGCCACAC +
Preference number: 4 (lower is better)
Translates to: LGLRKRLGTPALYSIETATTPGS*SRGWPH
Trigger: GTGTGGCCATCCTCGGCTTCAACTCCCCGGAGTGGT...TGCAGTTTCTATAGAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR TCA 90 bp GGTCACTCGCATGCCCGCTGTGCACAGTCCTGTGAGTTAAATGCCCACTACTCTCGGATGAAGCCAGACTaGGCCGCCACCTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: GHSHARCAQSCELNAHYSRMKPD*AATSWM
Trigger: CATCCAGGAGGTGGCGGCTCAGTCTGGCTTCATCCG...AGAGTAGTGGGCATTTAACTCACAGGACTGTGCACAGCGGGCATGCGAGTGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR TCA 90 bp CCAGGAAGAAGTGCTGTGTCTCTGCCATCATGGGGGCCGCTCCATAGAAGTTCTCGGATGAAGCCAGACTaGGCCGCCACCTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: PGRSAVSLPSWGPLHRSSRMKPD*AATSWM
Trigger: CATCCAGGAGGTGGCGGCTCAGTCTGGCTTCATCCG...AGAACTTCTATGGAGCGGCCCCCATGATGGCAGAGACACAGCACTTCTTCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559707.5
ENST00000560124.5
CDS-3UTR TCA 90 bp TCTTTTGACACTTGGCAAATCCCAGTGCCTGGCGAACCTTGGCTAGCACCAGGTCGCTGCCGGGGCAGGTaGGGTTCTGCTCCAAGGTCA +
Preference number: 4 (lower is better)
Translates to: SFDTWQIPVPGEPWLAPGRCRGR*GSAPRS
Trigger: TGACCTTGGAGCAGAACCTCACCTGCCCCGGCAGCG...ACCTGGTGCTAGCCAAGGTTCGCCAGGCACTGGGATTTGCCAAGTGTCAAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559707.5
ENST00000560124.5
CDS-3UTR TCA 90 bp AGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTATAGAAGGCCTGAGGTCTCACTaGGGCCGTAGCCCGCATACA +
Preference number: 4 (lower is better)
Translates to: RDLGLRKRLGTPALYSIEGLRSH*GRSPHT
Trigger: TGTATGCGGGCTACGGCCTCAGTGAGACCTCAGGCC...TTCTATAGAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR TCA 90 bp AGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTATAGAACCGCCGCGTTCATGTTaGCCCTCCGGATCCCCTCTT +
Preference number: 4 (lower is better)
Translates to: RDLGLRKRLGTPALYSIEPPRSC*PSGSPL
Trigger: AAGAGGGGATCCGGAGGGTCAACATGAACGCGGCGG...TTCTATAGAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR TCA 90 bp CTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTATAGAAACTGCACCGCCGCGTTCATGTTaGCCCTCCGGATCCCCTCTT +
Preference number: 4 (lower is better)
Translates to: LGLRKRLGTPALYSIETAPPRSC*PSGSPL
Trigger: AAGAGGGGATCCGGAGGGTCAACATGAACGCGGCGG...TGCAGTTTCTATAGAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR TCA 90 bp AGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTATAGAATGCCTGTGCCCAGACTaGAGAGACCTGGGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: RDLGLRKRLGTPALYSIECLCPD*RDLGLR
Trigger: CCTGAGCCCCAGGTCTCTTCAGTCTGGGCACAGGCA...TTCTATAGAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR TCA 90 bp CTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTATAGAAACTGCATGCCTGTGCCCAGACTaGAGAGACCTGGGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: LGLRKRLGTPALYSIETACLCPD*RDLGLR
Trigger: CCTGAGCCCCAGGTCTCTTCAGTCTGGGCACAGGCA...TGCAGTTTCTATAGAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR TCA 90 bp GTCGACCATGATGACATTGGCGCAGCAGTCATAAGCGATGTACTGGCAGGCCTCGAGGCTAGCCTTGAGTaGGCAGTGGGGGTGGGCATG +
Preference number: 4 (lower is better)
Translates to: VDHDDIGAAVISDVLAGLEASLE*AVGVGM
Trigger: CATGCCCACCCCCACTGCTCACTCAAGGCTAGCCTC...GAGGCCTGCCAGTACATCGCTTATGACTGCTGCGCCAATGTCATCATGGTCGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557935.1
CDS-3UTR GCA 90 bp ACGATGCCACCTGCAAATACTGTGCCCACTGCCGAGAAGAACCACTCCGGGGAGCTGGCTGCCGTACCGTaGCGTCCACGTGATATTGTC +
Preference number: 4 (lower is better)
Translates to: TMPPANTVPTAEKNHSGELAAVP*RPRDIV
Trigger: GACAATATCACGTGGACGGCACGGTACGGCAGCCAG...CTCCCCGGAGTGGTTCTTCTCGGCAGTGGGCACAGTATTTGCAGGTGGCATCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559707.5
CDS-3UTR GCA 90 bp AGACTGAAGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCCTGGCTGCCGTACCGTaGCGTCCACGTGATATTGTC +
Preference number: 4 (lower is better)
Translates to: RLKRPGAQEEARNACPLFLAAVP*RPRDIV
Trigger: GACAATATCACGTGGACGGCACGGTACGGCAGCCAG...GAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCTTCAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR GCA 90 bp GTTGTGACTGATTGCTTTTCCTGCAGCGCACGTGAGCAGTATCAGCCATCTCTCTGTCACCGGCCTGGCTaGCGTACCGTGCCGTCCACG +
Preference number: 4 (lower is better)
Translates to: VVTDCFSCSAREQYQPSLCHRPG*RTVPST
Trigger: CGTGGACGGCACGGTACGGCAGCCAGGCCGGTGACA...GAGAGATGGCTGATACTGCTCACGTGCGCTGCAGGAAAAGCAATCAGTCACAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR GCA 90 bp GCCGTACCGTGCCGTCCACGTGATATTGTCTTGACTCAGCATCACGCCCTTGGGGGGCAGGTGAGGTTCTaGTCCAAGGTCACCGACATG +
Preference number: 4 (lower is better)
Translates to: AVPCRPRDIVLTQHHALGGQVRF*SKVTDM
Trigger: CATGTCGGTGACCTTGGAGCAGAACCTCACCTGCCC...CCCAAGGGCGTGATGCTGAGTCAAGACAATATCACGTGGACGGCACGGTACGGC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000559707.5
ENST00000560124.5
CDS-3UTR GCA 90 bp TGCAGCGCACGTGAGCAGTATCAGCCATCTCTCTCCTACCCGCTCCACAGCCTAGGCAGATCTCGCCAATaGCCTCTGCGTCCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: CSAREQYQPSLSYPLHSLGRSRQ*PLRPGS
Trigger: TGAACCAGGACGCAGAGGGCATTGGCGAGATCTGCC...TAGGCTGTGGAGCGGGTAGGAGAGAGATGGCTGATACTGCTCACGTGCGCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR GCA 90 bp CTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTATAGAAACTGCACCAGCATCACCCGTGTaGAGCCAGCCTTCCTCGTCG +
Preference number: 4 (lower is better)
Translates to: LGLRKRLGTPALYSIETAPASPV*SQPSSS
Trigger: CGACGAGGAAGGCTGGCTGCACACGGGTGATGCTGG...TGCAGTTTCTATAGAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp ACGATGCCACCTGCAAATACTGTGCCCACTGCCGAGAAGAACCACTCCGGGGAGAGCTCCAGAATTGCGTaGCATCTGCCTCGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: TMPPANTVPTAEKNHSGESSRIA*HLPRAS
Trigger: GGAAGCCCGAGGCAGATGCCACGCAATTCTGGAGCT...CTCCCCGGAGTGGTTCTTCTCGGCAGTGGGCACAGTATTTGCAGGTGGCATCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
CDS-3UTR CCA 90 bp CATGATGACATTGGCGCAGCAGTCATAAGCGATGTACTGGCAGGCCTCTGGGGACTGCCGGCTCTCCTGTaGGGTCTCTCTGCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: HDDIGAAVISDVLAGLWGLPALL*GLSAVQ
Trigger: CTGGACAGCAGAGAGACCCCACAGGAGAGCCGGCAG...TCCCCAGAGGCCTGCCAGTACATCGCTTATGACTGCTGCGCCAATGTCATCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
CDS-3UTR CCA 90 bp AGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTATAGAACTGCCGGCTCTCCTGTaGGGTCTCTCTGCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: RDLGLRKRLGTPALYSIELPALL*GLSAVQ
Trigger: CTGGACAGCAGAGAGACCCCACAGGAGAGCCGGCAG...TTCTATAGAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258873.9
ENST00000560124.5
CDS-3UTR CCA 90 bp AGCCCTTGGCGGCTCTGCGGGCGAGCAGGTAGTATTGGGAGTAGGAGATGTGTTAGTGTAGGGAAGCTGTaGGCAGCTGGGGTCTATGCG +
Preference number: 4 (lower is better)
Translates to: SPWRLCGRAGSIGSRRCVSVGKL*AAGVYA
Trigger: CGCATAGACCCCAGCTGCCCACAGCTTCCCTACACT...AACACATCTCCTACTCCCAATACTACCTGCTCGCCCGCAGAGCCGCCAAGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
CDS-3UTR CCA 90 bp GGCCTGGTACACGGCCTCATCCTTCTTCTCTATGATCTCGGACACTGTGGTGGCACTACCACCTCCTGCTaGACTTCTGCCGGCCGGATG +
Preference number: 4 (lower is better)
Translates to: GLVHGLILLLYDLGHCGGTTTSC*TSAGRM
Trigger: CATCCGGCCGGCAGAAGTCCAGCAGGAGGTGGTAGT...GCCACCACAGTGTCCGAGATCATAGAGAAGAAGGATGAGGCCGTGTACCAGGCC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560124.5
CDS-3UTR CCA 90 bp AGCCCTTGGCGGCTCTGCGGGCGAGCAGGTAGTATTGGGAGTAGGAGATGTGTTGCAAATCCCAGTGCCTaGCGAACCTTGGCTAGCACC +
Preference number: 4 (lower is better)
Translates to: SPWRLCGRAGSIGSRRCVANPSA*RTLAST
Trigger: GGTGCTAGCCAAGGTTCGCCAGGCACTGGGATTTGC...AACACATCTCCTACTCCCAATACTACCTGCTCGCCCGCAGAGCCGCCAAGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559707.5
CDS-3UTR CCA 90 bp TGCAGCGCACGTGAGCAGTATCAGCCATCTCTCTCCTACCCGCTCCACAGCCTAATGCCCTCTGCGTCCTaGTTCACCAGCTTCACCCGA +
Preference number: 4 (lower is better)
Translates to: CSAREQYQPSLSYPLHSLMPSAS*FTSFTR
Trigger: TCGGGTGAAGCTGGTGAACCAGGACGCAGAGGGCAT...TAGGCTGTGGAGCGGGTAGGAGAGAGATGGCTGATACTGCTCACGTGCGCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp TGCAGCGCACGTGAGCAGTATCAGCCATCTCTCTCCTACCCGCTCCACAGCCTAGGATCCCCTCTTCGATaGCCTGGTACACGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: CSAREQYQPSLSYPLHSLGSPLR*PGTRPH
Trigger: ATGAGGCCGTGTACCAGGCCATCGAAGAGGGGATCC...TAGGCTGTGGAGCGGGTAGGAGAGAGATGGCTGATACTGCTCACGTGCGCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp CAGACTGAAGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCAGACTGAAGAGACCTaGGGCTCAGGAAGAGGCTCG +
Preference number: 4 (lower is better)
Translates to: QTEETWGSGRGSERLPSIQTEET*GSGRGS
Trigger: CGAGCCTCTTCCTGAGCCCCAGGTCTCTTCAGTCTG...AATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCTTCAGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR TCA 90 bp CTTGGCGGCTCTGCGGGCGAGCAGGTAGTATTGGGAGTAGGAGATGTGTTCCCAAGCTCAGTCACCCACTaGGAGAGGCTAGCCTTGAGT +
Preference number: 4 (lower is better)
Translates to: LGGSAGEQVVLGVGDVFPSSVTH*ERLALS
Trigger: ACTCAAGGCTAGCCTCTCTCAGTGGGTGACTGAGCT...TGGGAACACATCTCCTACTCCCAATACTACCTGCTCGCCCGCAGAGCCGCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
CDS-3UTR TCA 90 bp GCCGTACCGTGCCGTCCACGTGATATTGTCTTGACTCAGCATCACGCCCTTGGGAGCTCAGTCACCCACTaGGAGAGGCTAGCCTTGAGT +
Preference number: 4 (lower is better)
Translates to: AVPCRPRDIVLTQHHALGSSVTH*ERLALS
Trigger: ACTCAAGGCTAGCCTCTCTCAGTGGGTGACTGAGCT...CCCAAGGGCGTGATGCTGAGTCAAGACAATATCACGTGGACGGCACGGTACGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559707.5
CDS-3UTR TCA 90 bp CTTGTCCTCCATGTTCAGGTAGCCCATGAATATGGTGCGGCCCCACAGGCAGATCCTGGATGCGCTCCATaGTCTTCTCCCATACCCGGG +
Preference number: 4 (lower is better)
Translates to: LVLHVQVAHEYGAAPQADPGCAP*SSPIPG
Trigger: CCCGGGTATGGGAGAAGATCATGGAGCGCATCCAGG...ATCTGCCTGTGGGGCCGCACCATATTCATGGGCTACCTGAACATGGAGGACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560124.5
CDS-3UTR TCA 90 bp AAGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTATAGAGCATCTTTCGCCGGATaGAGCCAGACTGAGCCGCCA +
Preference number: 4 (lower is better)
Translates to: KRPGAQEEARNACPLFYRASFAG*SQTEPP
Trigger: TGGCGGCTCAGTCTGGCTTCATCCGGCGAAAGATGC...TCTATAGAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR TCA 90 bp AGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTATAGAACTGCCAGTCTGGTTGTaGAGGGCTTCAGGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: RDLGLRKRLGTPALYSIELPVWL*RASGRC
Trigger: GCAGCGACCTGAAGCCCTTCACAACCAGACTGGCAG...TTCTATAGAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR TCA 90 bp CACCTCCTGGATGCGCTCCATGATCTTCTCCCATACCCGGGGCACCCCCATGTGCATACAAGCGGATGTTaGGACCCAGGAAGAAGTGCT +
Preference number: 4 (lower is better)
Translates to: HLLDALHDLLPYPGHPHVHTSGC*DPGRSA
Trigger: AGCACTTCTTCCTGGGTCTCAACATCCGCTTGTATG...CACATGGGGGTGCCCCGGGTATGGGAGAAGATCATGGAGCGCATCCAGGAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559707.5
ENST00000560124.5
CDS-3UTR TCA 90 bp GGACAGGAACTTCCTCTGGTCCCCAATGAGCATGGCGTTGCTGATGATGGGCAGGGGCACCAACTTGCCTaGGCTGTACAGCCGGTAGTT +
Preference number: 4 (lower is better)
Translates to: GQELPLVPNEHGVADDGQGHQLA*AVQPVV
Trigger: AACTACCGGCTGTACAGCTCAGGCAAGTTGGTGCCC...CTGCCCATCATCAGCAACGCCATGCTCATTGGGGACCAGAGGAAGTTCCTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560124.5
CDS-3UTR TCA 90 bp CTCCTGCTGGACTTCTGCCGGCCGGATGTCACCGGCCTGGCTGCCGTACCGTGCGGTAAAAGGAGTCAATaGTACCTTTGTACTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LLLDFCRPDVTGLAAVPCGKRSQ*YLCTSP
Trigger: TGGAGAAGTACAAAGGTATCATTGACTCCTTTTACC...GCACGGTACGGCAGCCAGGCCGGTGACATCCGGCCGGCAGAAGTCCAGCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560124.5
CDS-3UTR TCA 90 bp CACAAAATTATGCCATGCTGGGGCTTGAGCTTGAGCTTGGGCTTAGGCTTGGGCTGCCTGTGCCCAGACTaGAGAGACCTGGGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: HKIMPCWGLSLSLGLGLGCLCPD*RDLGLR
Trigger: CCTGAGCCCCAGGTCTCTTCAGTCTGGGCACAGGCA...GCCCAAGCCTAAGCCCAAGCTCAAGCTCAAGCCCCAGCATGGCATAATTTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR TCA 90 bp AGCCGCCACCTCCTGGATGCGCTCCATGATCTTCTCCCATACCCGGGGCACCCCTGGCTGTCCTGTATGTaGGCTAGCAGCTTTTTAATC +
Preference number: 4 (lower is better)
Translates to: SRHLLDALHDLLPYPGHPWLSCM*ASSFLI
Trigger: GATTAAAAAGCTGCTAGCTCACATACAGGACAGCCA...GGGGTGCCCCGGGTATGGGAGAAGATCATGGAGCGCATCCAGGAGGTGGCGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000560124.5
CDS-3UTR GCA 90 bp GGCGGCTCTGCGGGCGAGCAGGTAGTATTGGGAGTAGGAGATGTGTTCCCACTTGAATTGCGTGGCATCTaGCTCGGGCTTCCACTGAAG +
Preference number: 4 (lower is better)
Translates to: GGSAGEQVVLGVGDVFPLELRGI*LGLPLK
Trigger: CTTCAGTGGAAGCCCGAGGCAGATGCCACGCAATTC...AAGTGGGAACACATCTCCTACTCCCAATACTACCTGCTCGCCCGCAGAGCCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
CDS-3UTR GCA 90 bp AGTTTCATCGTGGGACCCAACTCTCCACCCGAAATGGAGAAGTCTCTCTCGAGACTCTGCTGTCCAGCATaGTGGGGTCCCCGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: SFIVGPNSPPEMEKSLSRLCCPA*WGPRVG
Trigger: GCCCACACGGGGACCCCAGCATGCTGGACAGCAGAG...TCTCGAGAGAGACTTCTCCATTTCGGGTGGAGAGTTGGGTCCCACGATGAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560124.5
CDS-3UTR GCA 90 bp CCAGTGACGATGCCACCTGCAAATACTGTGCCCACTGCCGAGAAGAACCACTCCCTCACAATCATGTCCTaGCGGCTCTCCTGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: PVTMPPANTVPTAEKNHSLTIMS*RLSCGV
Trigger: GACCCCACAGGAGAGCCGGCAGGACATGATTGTGAG...GGAGTGGTTCTTCTCGGCAGTGGGCACAGTATTTGCAGGTGGCATCGTCACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
CDS-3UTR GCA 90 bp CAGCTGCTTCTGCGTGTCGACCATGATGACATTGGCGCAGCAGTCATAAGCGATGCCACACTGTGGGCCTaGTTCAGGCCGAGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: QLLLRVDHDDIGAAVISDATLWA*FRPSFR
Trigger: CCTGAAGCTCGGCCTGAAGCAGGCCCACAGTGTGGC...ATCGCTTATGACTGCTGCGCCAATGTCATCATGGTCGACACGCAGAAGCAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
CDS-3UTR GCA 90 bp GGAAGCCCTTGGCGGCTCTGCGGGCGAGCAGGTAGTATTGGGAGTAGGAGATGTCACCTGCAAATACTGTaGCCACTGCCGAGAAGAACC +
Preference number: 4 (lower is better)
Translates to: GSPWRLCGRAGSIGSRRCHLQIL*PLPRRT
Trigger: GGTTCTTCTCGGCAGTGGGCACAGTATTTGCAGGTG...ACATCTCCTACTCCCAATACTACCTGCTCGCCCGCAGAGCCGCCAAGGGCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
CDS-3UTR GCA 90 bp CTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTATAGAAACTGCAGGCATACTCCTGCTGGACTTCTaGCGGCCGGATGTCACCGGC +
Preference number: 4 (lower is better)
Translates to: LRKRLGTPALYSIETAGILLLDF*RPDVTG
Trigger: GCCGGTGACATCCGGCCGGCAGAAGTCCAGCAGGAG...TATGCCTGCAGTTTCTATAGAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR GCA 90 bp TCTTTTGACACTTGGCAAATCCCAGTGCCTGGCGAACCTTGGCTAGCACCAGGTCTGACTACCACCTCCTaGTGGACTTCTGCCGGCCGG +
Preference number: 4 (lower is better)
Translates to: SFDTWQIPVPGEPWLAPGLTTTS*WTSAGR
Trigger: CCGGCCGGCAGAAGTCCAGCAGGAGGTGGTAGTCAG...ACCTGGTGCTAGCCAAGGTTCGCCAGGCACTGGGATTTGCCAAGTGTCAAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559707.5
ENST00000560124.5
CDS-3UTR GCA 90 bp AGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTATAGAAAGCCGGGCACCAACTTaGCTGAGCTGTACAGCCGGT +
Preference number: 4 (lower is better)
Translates to: RDLGLRKRLGTPALYSIESRAPT*LSCTAG
Trigger: ACCGGCTGTACAGCTCAGGCAAGTTGGTGCCCGGCT...TTCTATAGAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR GCA 90 bp AAGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTATAGAACACTGTGGTGGCTCTaGTGCCCACCCTCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: KRPGAQEEARNACPLFYRTLWWL*CPPSGR
Trigger: TCTGCCAGAGGGTGGGCAGCAGAGCCACCACAGTGT...TCTATAGAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp AGCGATGAGGTCCCCATACTTATCCAGGGCCTCGTAGAACATCCGATGCACAGTCTGCCGGCTCTCCTGTaGGGTCTCTCTGCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: SDEVPILIQGLVEHPMHSLPALL*GLSAVQ
Trigger: CTGGACAGCAGAGAGACCCCACAGGAGAGCCGGCAG...ACTGTGCATCGGATGTTCTACGAGGCCCTGGATAAGTATGGGGACCTCATCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557935.1
CDS-3UTR CCA 90 bp TGCAGCGCACGTGAGCAGTATCAGCCATCTCTCTCCTACCCGCTCCACAGCCTAGGTTCAGGGACTCTTTaGAGAGTGGCTGCCTGTCAG +
Preference number: 4 (lower is better)
Translates to: CSAREQYQPSLSYPLHSLGSGTL*RVAACQ
Trigger: CTGACAGGCAGCCACTCTCCAAAGAGTCCCTGAACC...TAGGCTGTGGAGCGGGTAGGAGAGAGATGGCTGATACTGCTCACGTGCGCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CCA 90 bp ACTCTGCACCCGTTAAACAGTAACTTTCCCTTCCCCCTCCCATCCTCTGACACCAGGATGGCCACACTGTaGGCCTGCTTCAGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: TLHPLNSNFPFPLPSSDTRMATL*ACFRPS
Trigger: GCTCGGCCTGAAGCAGGCCCACAGTGTGGCCATCCT...GGTGTCAGAGGATGGGAGGGGGAAGGGAAAGTTACTGTTTAACGGGTGCAGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CCA 90 bp CAGACTGAAGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCCTTGGGGTTCCCAGTaGTGCCGGAAGTGTAGACTA +
Preference number: 4 (lower is better)
Translates to: QTEETWGSGRGSERLPSIPWGSQ*CRKCRL
Trigger: TAGTCTACACTTCCGGCACCACTGGGAACCCCAAGG...AATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCTTCAGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp AGACTGAAGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCCCAAGGTCACCGACATaGCCCACAGCAGCATCTTTC +
Preference number: 4 (lower is better)
Translates to: RLKRPGAQEEARNACPLFPRSPT*PTAASF
Trigger: GAAAGATGCTGCTGTGGGCCATGTCGGTGACCTTGG...GAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCTTCAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp GGCGGCTCTGCGGGCGAGCAGGTAGTATTGGGAGTAGGAGATGTGTTCCCACTTCCAAGGTCACCGACATaGCCCACAGCAGCATCTTTC +
Preference number: 4 (lower is better)
Translates to: GGSAGEQVVLGVGDVFPLPRSPT*PTAASF
Trigger: GAAAGATGCTGCTGTGGGCCATGTCGGTGACCTTGG...AAGTGGGAACACATCTCCTACTCCCAATACTACCTGCTCGCCCGCAGAGCCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559707.5
CDS-3UTR CCA 90 bp GGGGTGGTCTGGTGGCGACAGGCTAACGTAGAGCTGGCTGCTTTTATGAGAATGTCACGGCCTCCTCGATaGGCACAGGGGGCACATTCT +
Preference number: 4 (lower is better)
Translates to: GVVWWRQANVELAAFMRMSRPPR*AQGAHS
Trigger: AGAATGTGCCCCCTGTGCCCATCGAGGAGGCCGTGA...CATTCTCATAAAAGCAGCCAGCTCTACGTTAGCCTGTCGCCACCAGACCACCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CCA 90 bp CAAATCCCAGTGCCTGGCGAACCTTGGCTAGCACCAGGTAATCTGCCAGTCTGGCCCTCTTCGATGGCCTaGTACACGGCCTCATCCTTC +
Preference number: 4 (lower is better)
Translates to: QIPVPGEPWLAPGNLPVWPSSMA*YTASSF
Trigger: GAAGGATGAGGCCGTGTACCAGGCCATCGAAGAGGG...CCAGACTGGCAGATTACCTGGTGCTAGCCAAGGTTCGCCAGGCACTGGGATTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560124.5
CDS-3UTR TCA 90 bp AGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTATAGAATGTAGGGACTGGACATaGAGTGGGGGCCTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: RDLGLRKRLGTPALYSIECRDWT*SGGLRS
Trigger: AGACCTCAGGCCCCCACTTCATGTCCAGTCCCTACA...TTCTATAGAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR TCA 90 bp AGACTGAAGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCGAGTGCACTTCAAGGTaGGCAGCATGGACAGGAACT +
Preference number: 4 (lower is better)
Translates to: RLKRPGAQEEARNACPLFECTSR*AAWTGT
Trigger: AGTTCCTGTCCATGCTGCTCACCTTGAAGTGCACTC...GAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCTTCAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR GCA 90 bp AGCGATGAGGTCCCCATACTTATCCAGGGCCTCGTAGAACATCCGATGCACAGTAGCCCTTGGCGGCTCTaGGGGCGAGCAGGTAGTATT +
Preference number: 4 (lower is better)
Translates to: SDEVPILIQGLVEHPMHSSPWRL*GRAGSI
Trigger: AATACTACCTGCTCGCCCGCAGAGCCGCCAAGGGCT...ACTGTGCATCGGATGTTCTACGAGGCCCTGGATAAGTATGGGGACCTCATCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557935.1
CDS-3UTR GCA 90 bp AAGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTATAGAGGGCAGGTGAGGTTCTaGTCCAAGGTCACCGACATG +
Preference number: 4 (lower is better)
Translates to: KRPGAQEEARNACPLFYRGQVRF*SKVTDM
Trigger: CATGTCGGTGACCTTGGAGCAGAACCTCACCTGCCC...TCTATAGAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR GCA 90 bp GTTGTGACTGATTGCTTTTCCTGCAGCGCACGTGAGCAGTATCAGCCATCTCTCCCAGCATCACCCGTGTaGAGCCAGCCTTCCTCGTCG +
Preference number: 4 (lower is better)
Translates to: VVTDCFSCSAREQYQPSLPASPV*SQPSSS
Trigger: CGACGAGGAAGGCTGGCTGCACACGGGTGATGCTGG...GAGAGATGGCTGATACTGCTCACGTGCGCTGCAGGAAAAGCAATCAGTCACAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR GCA 90 bp TGTGCCCAGACTGAAGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCAATCTGTGCAAAAGATaGAGGTGGATGTCCCTAGGT +
Preference number: 4 (lower is better)
Translates to: CAQTEETWGSGRGSERLPNLCKR*RWMSLG
Trigger: ACCTAGGGACATCCACCTGCATCTTTTGCACAGATT...GGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCTTCAGTCTGGGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CCA 90 bp GGGGTGGTCTGGTGGCGACAGGCTAACGTAGAGCTGGCTGCTTTTATGAGAATGAGCTCCAGAATTGCGTaGCATCTGCCTCGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: GVVWWRQANVELAAFMRMSSRIA*HLPRAS
Trigger: GGAAGCCCGAGGCAGATGCCACGCAATTCTGGAGCT...CATTCTCATAAAAGCAGCCAGCTCTACGTTAGCCTGTCGCCACCAGACCACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CCA 90 bp CTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTATAGAAACTGCAGTACTGGCAGGCCTCTaGGGAGCTGGTGGTGTAGAT +
Preference number: 4 (lower is better)
Translates to: LGLRKRLGTPALYSIETAVLAGL*GAGGVD
Trigger: ATCTACACCACCAGCTCCCCAGAGGCCTGCCAGTAC...TGCAGTTTCTATAGAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CCA 90 bp AGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTATAGAACACTGGTTGGGCTGCTaGGTGTCAATGATGGCGTCC +
Preference number: 4 (lower is better)
Translates to: RDLGLRKRLGTPALYSIEHWLGC*VSMMAS
Trigger: GGACGCCATCATTGACACCCAGCAGCCCAACCAGTG...TTCTATAGAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp GGACAGGAACTTCCTCTGGTCCCCAATGAGCATGGCGTTGCTGATGATGGGCAGGTGTCTCTGCCATCATaGGGGCCGCTCCATAGAAGT +
Preference number: 4 (lower is better)
Translates to: GQELPLVPNEHGVADDGQVSLPS*GPLHRS
Trigger: ACTTCTATGGAGCGGCCCCCATGATGGCAGAGACAC...CTGCCCATCATCAGCAACGCCATGCTCATTGGGGACCAGAGGAAGTTCCTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560124.5
CDS-3UTR CCA 90 bp CCAGGAAGAAGTGCTGTGTCTCTGCCATCATGGGGGCCGCTCCATAGAAGTTCTATGCCCTCTGCGTCCTaGTTCACCAGCTTCACCCGA +
Preference number: 4 (lower is better)
Translates to: PGRSAVSLPSWGPLHRSSMPSAS*FTSFTR
Trigger: TCGGGTGAAGCTGGTGAACCAGGACGCAGAGGGCAT...AGAACTTCTATGGAGCGGCCCCCATGATGGCAGAGACACAGCACTTCTTCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560124.5
CDS-3UTR CCA 90 bp AGACTGAAGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCAGCCTTCCTCGTCGATaGCCTCACAAGTCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: RLKRPGAQEEARNACPLFSLPRR*PHKSCP
Trigger: AGGACAAGACTTGTGAGGCCATCGACGAGGAAGGCT...GAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCTTCAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp TGCAGCGCACGTGAGCAGTATCAGCCATCTCTCTCCTACCCGCTCCACAGCCTACTGGTCAGAGGTGTCTaGGTCCAGAGTGCACTTCAA +
Preference number: 4 (lower is better)
Translates to: CSAREQYQPSLSYPLHSLLVRGV*VQSALQ
Trigger: TTGAAGTGCACTCTGGACCCAGACACCTCTGACCAG...TAGGCTGTGGAGCGGGTAGGAGAGAGATGGCTGATACTGCTCACGTGCGCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp CTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTATAGAAACTGCACCCTCTTCGATGGCCTaGTACACGGCCTCATCCTTC +
Preference number: 4 (lower is better)
Translates to: LGLRKRLGTPALYSIETAPSSMA*YTASSF
Trigger: GAAGGATGAGGCCGTGTACCAGGCCATCGAAGAGGG...TGCAGTTTCTATAGAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp GAACTTCCTCTGGTCCCCAATGAGCATGGCGTTGCTGATGATGGGCAGCTCCATCAGACTGAAGAGACCTaGGGCTCAGGAAGAGGCTCG +
Preference number: 4 (lower is better)
Translates to: ELPLVPNEHGVADDGQLHQTEET*GSGRGS
Trigger: CGAGCCTCTTCCTGAGCCCCAGGTCTCTTCAGTCTG...ATGGAGCTGCCCATCATCAGCAACGCCATGCTCATTGGGGACCAGAGGAAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560124.5
CDS-3UTR CCA 90 bp AGGTTCTGCTCCAAGGTCACCGACATGGCCCACAGCAGCATCTTTCGCCGGATGTGCTGTGCCCTGACCTaGAGATCTAACAGACTTGGC +
Preference number: 4 (lower is better)
Translates to: RFCSKVTDMAHSSIFRRMCCALT*RSNRLG
Trigger: GCCAAGTCTGTTAGATCTCCAGGTCAGGGCACAGCA...CATCCGGCGAAAGATGCTGCTGTGGGCCATGTCGGTGACCTTGGAGCAGAACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560124.5
CDS-3UTR CCA 90 bp AGACTGAAGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCAAGCATCAAGTCAGTTaGCATGTGGGTGGCGGAGTG +
Preference number: 4 (lower is better)
Translates to: RLKRPGAQEEARNACPLFKHQVS*HVGGGV
Trigger: CACTCCGCCACCCACATGCCAACTGACTTGATGCTT...GAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCTTCAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
3UTR CAA 72 bp CCATGCTGGGGCTTGAGCTTGAGCTTGGGCTTAGGCTaGGGCTCAGCTTTTGACCCTCAGGCATCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: PCWGLSLSLGLG*GSAFDPQASPF
Trigger: GAAAGGAGATGCCTGAGGGTCAAAAGCTGAGCCCAAGCCTAAGCCCAAGCTCAAGCTCAAGCCCCAGCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR TCA 90 bp CAGGTGAGGTTCTGCTCCAAGGTCACCGACATGGCCCACAGCAGCATCTTTCGCCATTCCCCAGCTCCATaGATTCCTCCATCGTGTACA +
Preference number: 4 (lower is better)
Translates to: QVRFCSKVTDMAHSSIFRHSPAP*IPPSCT
Trigger: TGTACACGATGGAGGAATTCATGGAGCTGGGGAATG...GCGAAAGATGCTGCTGTGGGCCATGTCGGTGACCTTGGAGCAGAACCTCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559707.5
ENST00000560124.5
CDS-3UTR TCA 90 bp AGGTTCTGCTCCAAGGTCACCGACATGGCCCACAGCAGCATCTTTCGCCGGATGCACGTGATATTGTCTTaGCTCAGCATCACGCCCTTG +
Preference number: 4 (lower is better)
Translates to: RFCSKVTDMAHSSIFRRMHVILS*LSITPL
Trigger: CAAGGGCGTGATGCTGAGTCAAGACAATATCACGTG...CATCCGGCGAAAGATGCTGCTGTGGGCCATGTCGGTGACCTTGGAGCAGAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559707.5
ENST00000560124.5
CDS-3UTR TCA 90 bp AGACTGAAGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCCACGTGATATTGTCTTaGCTCAGCATCACGCCCTTG +
Preference number: 4 (lower is better)
Translates to: RLKRPGAQEEARNACPLFHVILS*LSITPL
Trigger: CAAGGGCGTGATGCTGAGTCAAGACAATATCACGTG...GAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCTTCAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR TCA 90 bp GGACAGGAACTTCCTCTGGTCCCCAATGAGCATGGCGTTGCTGATGATGGGCAGGAGTGCACTTCAAGGTaGGCAGCATGGACAGGAACT +
Preference number: 4 (lower is better)
Translates to: GQELPLVPNEHGVADDGQECTSR*AAWTGT
Trigger: AGTTCCTGTCCATGCTGCTCACCTTGAAGTGCACTC...CTGCCCATCATCAGCAACGCCATGCTCATTGGGGACCAGAGGAAGTTCCTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560124.5
CDS-3UTR TCA 90 bp CAGACTGAAGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCATCCTTCTTCTCTATaGTCTCGGACACTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: QTEETWGSGRGSERLPSIHPSSL*SRTLWW
Trigger: CCACCACAGTGTCCGAGATCATAGAGAAGAAGGATG...AATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCTTCAGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR GCA 90 bp GAGCAGGTAGTATTGGGAGTAGGAGATGTGTTCCCACTTGTCCTGGCGCTTGAACCTGTGGGGTCTCTCTaGTGTCCAGCATGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: EQVVLGVGDVFPLVLALEPVGSL*CPACWG
Trigger: ACCCCAGCATGCTGGACAGCAGAGAGACCCCACAGG...TTCAAGCGCCAGGACAAGTGGGAACACATCTCCTACTCCCAATACTACCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
CDS-3UTR GCA 90 bp CTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTATAGAAACTGCAGGCATAAGCCCTTGGCGGCTCTaGGGGCGAGCAGGTAGTATT +
Preference number: 4 (lower is better)
Translates to: LRKRLGTPALYSIETAGISPWRL*GRAGSI
Trigger: AATACTACCTGCTCGCCCGCAGAGCCGCCAAGGGCT...TATGCCTGCAGTTTCTATAGAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR GCA 90 bp CACAAAATTATGCCATGCTGGGGCTTGAGCTTGAGCTTGGGCTTAGGCTTGGGCCTGGCTGCCGTACCGTaGCGTCCACGTGATATTGTC +
Preference number: 4 (lower is better)
Translates to: HKIMPCWGLSLSLGLGLGLAAVP*RPRDIV
Trigger: GACAATATCACGTGGACGGCACGGTACGGCAGCCAG...GCCCAAGCCTAAGCCCAAGCTCAAGCTCAAGCCCCAGCATGGCATAATTTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR GCA 90 bp TGTTTCCAGATCTTCAGGATCTTTTCCAGCTGCTTCTGCGTGTCGACCATGATGCTCCTGCTGGACTTCTaGCGGCCGGATGTCACCGGC +
Preference number: 4 (lower is better)
Translates to: CFQIFRIFSSCFCVSTMMLLLDF*RPDVTG
Trigger: GCCGGTGACATCCGGCCGGCAGAAGTCCAGCAGGAG...CATCATGGTCGACACGCAGAAGCAGCTGGAAAAGATCCTGAAGATCTGGAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559707.5
CDS-3UTR GCA 90 bp TGCAGCGCACGTGAGCAGTATCAGCCATCTCTCTCCTACCCGCTCCACAGCCTAAGACCCAGGAAGAAGTaGTGTGTCTCTGCCATCATG +
Preference number: 4 (lower is better)
Translates to: CSAREQYQPSLSYPLHSLRPRKK*CVSAIM
Trigger: CATGATGGCAGAGACACAGCACTTCTTCCTGGGTCT...TAGGCTGTGGAGCGGGTAGGAGAGAGATGGCTGATACTGCTCACGTGCGCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR GCA 90 bp GGTCACTCGCATGCCCGCTGTGCACAGTCCTGTGAGTTAAATGCCCACTACTCTAGCAGCCGAGTAACTTaGCCAGGTGGCATCTCACTG +
Preference number: 4 (lower is better)
Translates to: GHSHARCAQSCELNAHYSSSRVT*PGGISL
Trigger: CAGTGAGATGCCACCTGGGCAAGTTACTCGGCTGCT...AGAGTAGTGGGCATTTAACTCACAGGACTGTGCACAGCGGGCATGCGAGTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CCA 90 bp TGTTTCCAGATCTTCAGGATCTTTTCCAGCTGCTTCTGCGTGTCGACCATGATGTGCTGTCCAGCATGCTaGGGTCCCCGTGTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: CFQIFRIFSSCFCVSTMMCCPAC*GPRVGS
Trigger: GCTGCCCACACGGGGACCCCAGCATGCTGGACAGCA...CATCATGGTCGACACGCAGAAGCAGCTGGAAAAGATCCTGAAGATCTGGAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
CDS-3UTR CCA 90 bp CCAGGAAGAAGTGCTGTGTCTCTGCCATCATGGGGGCCGCTCCATAGAAGTTCTCCTTGGGGTTCCCAGTaGTGCCGGAAGTGTAGACTA +
Preference number: 4 (lower is better)
Translates to: PGRSAVSLPSWGPLHRSSPWGSQ*CRKCRL
Trigger: TAGTCTACACTTCCGGCACCACTGGGAACCCCAAGG...AGAACTTCTATGGAGCGGCCCCCATGATGGCAGAGACACAGCACTTCTTCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559707.5
ENST00000560124.5
CDS-3UTR CCA 90 bp CCAGGAAGAAGTGCTGTGTCTCTGCCATCATGGGGGCCGCTCCATAGAAGTTCTGTGCCTGGCGAACCTTaGCTAGCACCAGGTAATCTG +
Preference number: 4 (lower is better)
Translates to: PGRSAVSLPSWGPLHRSSVPGEP*LAPGNL
Trigger: CAGATTACCTGGTGCTAGCCAAGGTTCGCCAGGCAC...AGAACTTCTATGGAGCGGCCCCCATGATGGCAGAGACACAGCACTTCTTCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559707.5
ENST00000560124.5
CDS-3UTR CCA 90 bp GGGGTGGTCTGGTGGCGACAGGCTAACGTAGAGCTGGCTGCTTTTATGAGAATGGTGTCTCTGCCATCATaGGGGCCGCTCCATAGAAGT +
Preference number: 4 (lower is better)
Translates to: GVVWWRQANVELAAFMRMVSLPS*GPLHRS
Trigger: ACTTCTATGGAGCGGCCCCCATGATGGCAGAGACAC...CATTCTCATAAAAGCAGCCAGCTCTACGTTAGCCTGTCGCCACCAGACCACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CCA 90 bp CTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTATAGAAACTGCAGTGTCTCTGCCATCATaGGGGCCGCTCCATAGAAGT +
Preference number: 4 (lower is better)
Translates to: LGLRKRLGTPALYSIETAVSLPS*GPLHRS
Trigger: ACTTCTATGGAGCGGCCCCCATGATGGCAGAGACAC...TGCAGTTTCTATAGAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp ACTCTGCACCCGTTAAACAGTAACTTTCCCTTCCCCCTCCCATCCTCTGACACCCAGACTGAAGAGACCTaGGGCTCAGGAAGAGGCTCG +
Preference number: 4 (lower is better)
Translates to: TLHPLNSNFPFPLPSSDTQTEET*GSGRGS
Trigger: CGAGCCTCTTCCTGAGCCCCAGGTCTCTTCAGTCTG...GGTGTCAGAGGATGGGAGGGGGAAGGGAAAGTTACTGTTTAACGGGTGCAGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CCA 90 bp CTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTATAGAAACTGCAAAGTCAGTTGGCATGTaGGTGGCGGAGTGCCTGGTA +
Preference number: 4 (lower is better)
Translates to: LGLRKRLGTPALYSIETAKSVGM*VAECLV
Trigger: TACCAGGCACTCCGCCACCCACATGCCAACTGACTT...TGCAGTTTCTATAGAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp AAAATTATGCCATGCTGGGGCTTGAGCTTGAGCTTGGGCTTAGGCTTGGGCTCACCGATCCTCCTGGGCTaGGTAGATGGTGGTGGAGTG +
Preference number: 4 (lower is better)
Translates to: KIMPCWGLSLSLGLGLGSPILLG*VDGGGV
Trigger: CACTCCACCACCATCTACCCAGCCCAGGAGGATCGG...TGAGCCCAAGCCTAAGCCCAAGCTCAAGCTCAAGCCCCAGCATGGCATAATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR TCA 90 bp CACAAAATTATGCCATGCTGGGGCTTGAGCTTGAGCTTGGGCTTAGGCTTGGGCTGTTCAGGTAGCCCATaGATATGGTGCGGCCCCACA +
Preference number: 4 (lower is better)
Translates to: HKIMPCWGLSLSLGLGLGCSGSP*IWCGPT
Trigger: TGTGGGGCCGCACCATATTCATGGGCTACCTGAACA...GCCCAAGCCTAAGCCCAAGCTCAAGCTCAAGCCCCAGCATGGCATAATTTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR TCA 90 bp CTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTATAGAAACTGCAGGCATAGCCAGTGCTGTGCCCTaGCCTGGAGATCTAACAGAC +
Preference number: 4 (lower is better)
Translates to: LRKRLGTPALYSIETAGIASAVP*PGDLTD
Trigger: GTCTGTTAGATCTCCAGGTCAGGGCACAGCACTGGC...TATGCCTGCAGTTTCTATAGAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR TCA 90 bp CAGGTGAGGTTCTGCTCCAAGGTCACCGACATGGCCCACAGCAGCATCTTTCGCTCGCTAGGTGAGTTGTaGCTGATTGCTTTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: QVRFCSKVTDMAHSSIFRSLGEL*LIAFPA
Trigger: TGCAGGAAAAGCAATCAGTCACAACTCACCTAGCGA...GCGAAAGATGCTGCTGTGGGCCATGTCGGTGACCTTGGAGCAGAACCTCACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560124.5
CDS-3UTR TCA 90 bp ACTCTGCACCCGTTAAACAGTAACTTTCCCTTCCCCCTCCCATCCTCTGACACCGGCTCAGCTTGCTACTaGGAATGGCTGCTTCCCGTA +
Preference number: 4 (lower is better)
Translates to: TLHPLNSNFPFPLPSSDTGSACY*EWLLPV
Trigger: TACGGGAAGCAGCCATTCTCAGTAGCAAGCTGAGCC...GGTGTCAGAGGATGGGAGGGGGAAGGGAAAGTTACTGTTTAACGGGTGCAGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR GCA 90 bp CAGCTGCTTCTGCGTGTCGACCATGATGACATTGGCGCAGCAGTCATAAGCGATGAATTGCGTGGCATCTaGCTCGGGCTTCCACTGAAG +
Preference number: 4 (lower is better)
Translates to: QLLLRVDHDDIGAAVISDELRGI*LGLPLK
Trigger: CTTCAGTGGAAGCCCGAGGCAGATGCCACGCAATTC...ATCGCTTATGACTGCTGCGCCAATGTCATCATGGTCGACACGCAGAAGCAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
CDS-3UTR GCA 90 bp CAAACAGGCAGCAGCAGTTTTATTAAGCATCAAGTCAGTTGGCATGTGGGTGGCCTGACTACCACCTCCTaGTGGACTTCTGCCGGCCGG +
Preference number: 4 (lower is better)
Translates to: QTGSSSFIKHQVSWHVGGLTTTS*WTSAGR
Trigger: CCGGCCGGCAGAAGTCCAGCAGGAGGTGGTAGTCAG...GCCACCCACATGCCAACTGACTTGATGCTTAATAAAACTGCTGCTGCCTGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258873.9
ENST00000560124.5
CDS-3UTR GCA 90 bp CTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTATAGAAACTGCAGGCATAGGGCAGGTGAGGTTCTaGTCCAAGGTCACCGACATG +
Preference number: 4 (lower is better)
Translates to: LRKRLGTPALYSIETAGIGQVRF*SKVTDM
Trigger: CATGTCGGTGACCTTGGAGCAGAACCTCACCTGCCC...TATGCCTGCAGTTTCTATAGAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR GCA 90 bp CAGACTGAAGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTTTTGGTAAAGCTCCCTaGCTCCCTTTGCATCAAGAG +
Preference number: 4 (lower is better)
Translates to: QTEETWGSGRGSERLPSIFGKAP*LPLHQE
Trigger: CTCTTGATGCAAAGGGAGGCAGGGAGCTTTACCAAA...AATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCTTCAGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR GCA 90 bp GGGGTGGTCTGGTGGCGACAGGCTAACGTAGAGCTGGCTGCTTTTATGAGAATGCCATCCTCTGACACCTaGCATTCTGCTTCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: GVVWWRQANVELAAFMRMPSSDT*HSASCL
Trigger: GAGACAGGAAGCAGAATGGCAGGTGTCAGAGGATGG...CATTCTCATAAAAGCAGCCAGCTCTACGTTAGCCTGTCGCCACCAGACCACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CCA 90 bp CTCCATCTTCACGGCCTCCTCGATGGGCACAGGGGGCACATTCTCCCCACCAGCTCAATTTTTCTTGGGTaGTCCTCACAATCATGTCCT +
Preference number: 4 (lower is better)
Translates to: LHLHGLLDGHRGHILPTSSIFLG*SSQSCP
Trigger: AGGACATGATTGTGAGGACCACCCAAGAAAAATTGA...GCTGGTGGGGAGAATGTGCCCCCTGTGCCCATCGAGGAGGCCGTGAAGATGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000560124.5
CDS-3UTR CCA 90 bp CTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTATAGAAACTGCAGAGAGCTCGAGAGCATaGTTCAGGGACTCTTTGGAG +
Preference number: 4 (lower is better)
Translates to: LGLRKRLGTPALYSIETAESSRA*FRDSLE
Trigger: CTCCAAAGAGTCCCTGAACCATGCTCTCGAGCTCTC...TGCAGTTTCTATAGAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CCA 90 bp CTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTATAGAAACTGCAGGCATAAGTGTAGGGAAGCTGTaGGCAGCTGGGGTCTATGCG +
Preference number: 4 (lower is better)
Translates to: LRKRLGTPALYSIETAGISVGKL*AAGVYA
Trigger: CGCATAGACCCCAGCTGCCCACAGCTTCCCTACACT...TATGCCTGCAGTTTCTATAGAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CCA 90 bp TTGAGCTTGGGCTTAGGCTTGGGCTCAGCTTTTGACCCTCAGGCATCTCCTTTCTGTTCCCACTTGTCCTaGCGCTTGAAGCCCAAAGCG +
Preference number: 4 (lower is better)
Translates to: LSLGLGLGSAFDPQASPFCSHLS*RLKPKA
Trigger: CGCTTTGGGCTTCAAGCGCCAGGACAAGTGGGAACA...GAAAGGAGATGCCTGAGGGTCAAAAGCTGAGCCCAAGCCTAAGCCCAAGCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CCA 90 bp AACTACCCACACGTGAAGCTTCTTGGAATTGTCAGCTATTGTTGGCGTAAGACCGCTTCAGGAAGCCCTTaGCGGCTCTGCGGGCGAGCA +
Preference number: 4 (lower is better)
Translates to: NYPHVKLLGIVSYCWRKTASGSP*RLCGRA
Trigger: TGCTCGCCCGCAGAGCCGCCAAGGGCTTCCTGAAGC...GGTCTTACGCCAACAATAGCTGACAATTCCAAGAAGCTTCACGTGTGGGTAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CCA 90 bp CTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTATAGAAACTGCAGGCATAGCAAATCCCAGTGCCTaGCGAACCTTGGCTAGCACC +
Preference number: 4 (lower is better)
Translates to: LRKRLGTPALYSIETAGIANPSA*RTLAST
Trigger: GGTGCTAGCCAAGGTTCGCCAGGCACTGGGATTTGC...TATGCCTGCAGTTTCTATAGAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp TGCAGCGCACGTGAGCAGTATCAGCCATCTCTCTCCTACCCGCTCCACAGCCTAAGTTCTTTTGACACTTaGCAAATCCCAGTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: CSAREQYQPSLSYPLHSLSSFDT*QIPVPG
Trigger: GCCAGGCACTGGGATTTGCCAAGTGTCAAAAGAACT...TAGGCTGTGGAGCGGGTAGGAGAGAGATGGCTGATACTGCTCACGTGCGCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp TTTCAGTTTCATCGTGGGACCCAACTCTCCACCCGAAATGGAGAAGTCTCTCTCTCACGGCCTCCTCGATaGGCACAGGGGGCACATTCT +
Preference number: 4 (lower is better)
Translates to: FQFHRGTQLSTRNGEVSLSRPPR*AQGAHS
Trigger: AGAATGTGCCCCCTGTGCCCATCGAGGAGGCCGTGA...GAGAGAGACTTCTCCATTTCGGGTGGAGAGTTGGGTCCCACGATGAAACTGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560124.5
CDS-3UTR CCA 90 bp GTTGTGACTGATTGCTTTTCCTGCAGCGCACGTGAGCAGTATCAGCCATCTCTCGGATCCCCTCTTCGATaGCCTGGTACACGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: VVTDCFSCSAREQYQPSLGSPLR*PGTRPH
Trigger: ATGAGGCCGTGTACCAGGCCATCGAAGAGGGGATCC...GAGAGATGGCTGATACTGCTCACGTGCGCTGCAGGAAAAGCAATCAGTCACAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp AAGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTATAGATGCTGTGCCCTGACCTaGAGATCTAACAGACTTGGC +
Preference number: 4 (lower is better)
Translates to: KRPGAQEEARNACPLFYRCCALT*RSNRLG
Trigger: GCCAAGTCTGTTAGATCTCCAGGTCAGGGCACAGCA...TCTATAGAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp CTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTATAGAAACTGCAGGCATAAGTGGGGTGGTCTGGTaGCGACAGGCTAACGTAGAG +
Preference number: 4 (lower is better)
Translates to: LRKRLGTPALYSIETAGISGVVW*RQANVE
Trigger: CTCTACGTTAGCCTGTCGCCACCAGACCACCCCACT...TATGCCTGCAGTTTCTATAGAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258873.9
3UTR CAA 72 bp GGCTCTGCTGCCCACCCTCTGGCAGAACTCCATAGCTaGTTCAGTCAGATTATCAGTCTGGTCAGAGGTGTC +
Preference number: 4 (lower is better)
Translates to: GSAAHPLAELHS*FSQIISLVRGV
Trigger: GACACCTCTGACCAGACTGATAATCTGACTGAACAAGCTATGGAGTTCTGCCAGAGGGTGGGCAGCAGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560124.5
CDS-3UTR TCA 90 bp GGGGTGGTCTGGTGGCGACAGGCTAACGTAGAGCTGGCTGCTTTTATGAGAATGTGGTGTAGATGCCAGTaGCGATGCCACCTGCAAATA +
Preference number: 4 (lower is better)
Translates to: GVVWWRQANVELAAFMRMWCRCQ*RCHLQI
Trigger: TATTTGCAGGTGGCATCGTCACTGGCATCTACACCA...CATTCTCATAAAAGCAGCCAGCTCTACGTTAGCCTGTCGCCACCAGACCACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR TCA 90 bp GTCGACCATGATGACATTGGCGCAGCAGTCATAAGCGATGTACTGGCAGGCCTCTGGTGTAGATGCCAGTaGCGATGCCACCTGCAAATA +
Preference number: 4 (lower is better)
Translates to: VDHDDIGAAVISDVLAGLWCRCQ*RCHLQI
Trigger: TATTTGCAGGTGGCATCGTCACTGGCATCTACACCA...GAGGCCTGCCAGTACATCGCTTATGACTGCTGCGCCAATGTCATCATGGTCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
CDS-3UTR TCA 90 bp CACTTCATTCCCCAGCTCCATGAATTCCTCCATCGTGTACACATTGGCCATCTTGCATCTTTCGCCGGATaGAGCCAGACTGAGCCGCCA +
Preference number: 4 (lower is better)
Translates to: HFIPQLHEFLHRVHIGHLASFAG*SQTEPP
Trigger: TGGCGGCTCAGTCTGGCTTCATCCGGCGAAAGATGC...AAGATGGCCAATGTGTACACGATGGAGGAATTCATGGAGCTGGGGAATGAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559707.5
ENST00000560124.5
CDS-3UTR TCA 90 bp GATGCCAGTGACGATGCCACCTGCAAATACTGTGCCCACTGCCGAGAAGAACCACATACAAGCGGATGTTaGGACCCAGGAAGAAGTGCT +
Preference number: 4 (lower is better)
Translates to: DASDDATCKYCAHCREEPHTSGC*DPGRSA
Trigger: AGCACTTCTTCCTGGGTCTCAACATCCGCTTGTATG...TGGTTCTTCTCGGCAGTGGGCACAGTATTTGCAGGTGGCATCGTCACTGGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559707.5
CDS-3UTR TCA 90 bp TGCAGCGCACGTGAGCAGTATCAGCCATCTCTCTCCTACCCGCTCCACAGCCTATTCTGGAAGGAGAGCTaGTCTCATTTGTCACCTGAA +
Preference number: 4 (lower is better)
Translates to: CSAREQYQPSLSYPLHSLFWKES*SHLSPE
Trigger: TTCAGGTGACAAATGAGATCAGCTCTCCTTCCAGAA...TAGGCTGTGGAGCGGGTAGGAGAGAGATGGCTGATACTGCTCACGTGCGCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR TCA 90 bp GTTGTGACTGATTGCTTTTCCTGCAGCGCACGTGAGCAGTATCAGCCATCTCTCTTCCTGCAGCGCACGTaGGCAGTATCAGCCATCTCT +
Preference number: 4 (lower is better)
Translates to: VVTDCFSCSAREQYQPSLFLQRT*AVSAIS
Trigger: AGAGATGGCTGATACTGCTCACGTGCGCTGCAGGAA...GAGAGATGGCTGATACTGCTCACGTGCGCTGCAGGAAAAGCAATCAGTCACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR TCA 90 bp CTGGTCAGAGGTGTCTGGGTCCAGAGTGCACTTCAAGGTGAGCAGCATGGACAGAGTCAGGTCGCTAGGTaGGTTGTGACTGATTGCTTT +
Preference number: 4 (lower is better)
Translates to: LVRGVWVQSALQGEQHGQSQVAR*VVTDCF
Trigger: AAAGCAATCAGTCACAACTCACCTAGCGACCTGACT...CTGTCCATGCTGCTCACCTTGAAGTGCACTCTGGACCCAGACACCTCTGACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560124.5
CDS-3UTR TCA 90 bp AAGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTATAGACTGTGCACAGTCCTGTaGGTTAAATGCCCACTACTC +
Preference number: 4 (lower is better)
Translates to: KRPGAQEEARNACPLFYRLCTVL*VKCPLL
Trigger: GAGTAGTGGGCATTTAACTCACAGGACTGTGCACAG...TCTATAGAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR TCA 90 bp CACAAAATTATGCCATGCTGGGGCTTGAGCTTGAGCTTGGGCTTAGGCTTGGGCCTTGGGCTCAGCTTTTaGCCCTCAGGCATCTCCTTT +
Preference number: 4 (lower is better)
Translates to: HKIMPCWGLSLSLGLGLGLGLSF*PSGISF
Trigger: AAAGGAGATGCCTGAGGGTCAAAAGCTGAGCCCAAG...GCCCAAGCCTAAGCCCAAGCTCAAGCTCAAGCCCCAGCATGGCATAATTTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR GCA 90 bp TGTTTCCAGATCTTCAGGATCTTTTCCAGCTGCTTCTGCGTGTCGACCATGATGCCTGTGGGGTCTCTCTaGTGTCCAGCATGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: CFQIFRIFSSCFCVSTMMPVGSL*CPACWG
Trigger: ACCCCAGCATGCTGGACAGCAGAGAGACCCCACAGG...CATCATGGTCGACACGCAGAAGCAGCTGGAAAAGATCCTGAAGATCTGGAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
CDS-3UTR GCA 90 bp ACTCTGCACCCGTTAAACAGTAACTTTCCCTTCCCCCTCCCATCCTCTGACACCTCTTTGGAGAGTGGCTaGCTGTCAGTCAGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: TLHPLNSNFPFPLPSSDTSLESG*LSVSEL
Trigger: CAGCTCACTGACTGACAGGCAGCCACTCTCCAAAGA...GGTGTCAGAGGATGGGAGGGGGAAGGGAAAGTTACTGTTTAACGGGTGCAGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR GCA 90 bp TACCTGGAACTAAGGCCAAAAATTATCAGCCCTTTCGTTCTGGAAGGAGAGCTGGCCACACTGTGGGCCTaGTTCAGGCCGAGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: YLELRPKIISPFVLEGELATLWA*FRPSFR
Trigger: CCTGAAGCTCGGCCTGAAGCAGGCCCACAGTGTGGC...CAGCTCTCCTTCCAGAACGAAAGGGCTGATAATTTTTGGCCTTAGTTCCAGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR GCA 90 bp CTACCTGGAACTAAGGCCAAAAATTATCAGCCCTTTCGTTCTGGAAGGAGAGCTCTGACTACCACCTCCTaGTGGACTTCTGCCGGCCGG +
Preference number: 4 (lower is better)
Translates to: LPGTKAKNYQPFRSGRRALTTTS*WTSAGR
Trigger: CCGGCCGGCAGAAGTCCAGCAGGAGGTGGTAGTCAG...AGCTCTCCTTCCAGAACGAAAGGGCTGATAATTTTTGGCCTTAGTTCCAGGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR GCA 90 bp CTTGTCCTCCATGTTCAGGTAGCCCATGAATATGGTGCGGCCCCACAGGCAGATAGACCCAGGAAGAAGTaGTGTGTCTCTGCCATCATG +
Preference number: 4 (lower is better)
Translates to: LVLHVQVAHEYGAAPQADRPRKK*CVSAIM
Trigger: CATGATGGCAGAGACACAGCACTTCTTCCTGGGTCT...ATCTGCCTGTGGGGCCGCACCATATTCATGGGCTACCTGAACATGGAGGACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560124.5
CDS-3UTR GCA 90 bp CTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTATAGAAACTGCAAGACCCAGGAAGAAGTaGTGTGTCTCTGCCATCATG +
Preference number: 4 (lower is better)
Translates to: LGLRKRLGTPALYSIETARPRKK*CVSAIM
Trigger: CATGATGGCAGAGACACAGCACTTCTTCCTGGGTCT...TGCAGTTTCTATAGAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR GCA 90 bp CTGGTCAGAGGTGTCTGGGTCCAGAGTGCACTTCAAGGTGAGCAGCATGGACAGACTGATTGCTTTTCCTaGAGCGCACGTGAGCAGTAT +
Preference number: 4 (lower is better)
Translates to: LVRGVWVQSALQGEQHGQTDCFS*SAREQY
Trigger: ATACTGCTCACGTGCGCTGCAGGAAAAGCAATCAGT...CTGTCCATGCTGCTCACCTTGAAGTGCACTCTGGACCCAGACACCTCTGACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560124.5
CDS-3UTR CCA 90 bp ATCTTCTCCCATACCCGGGGCACCCCCATGTGTGATGTGGGCTCCACCTCCCGCGTTTTCAATTTTTCTTaGGTGGTCCTCACAATCATG +
Preference number: 4 (lower is better)
Translates to: IFSHTRGTPMCDVGSTSRVFNFS*VVLTIM
Trigger: CATGATTGTGAGGACCACCCAAGAAAAATTGAAAAC...GCGGGAGGTGGAGCCCACATCACACATGGGGGTGCCCCGGGTATGGGAGAAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000559707.5
ENST00000560124.5
CDS-3UTR CCA 90 bp GGATGGCCACACTGTGGGCCTGCTTCAGGCCGAGCTTCAGGAAGCCCTTGGCGGATTGGCCATCTTGTTTaGAGGAGGTTCTTTATATAT +
Preference number: 4 (lower is better)
Translates to: GWPHCGPASGRASGSPWRIGHLV*RRFFIY
Trigger: ATATATAAAGAACCTCCTCCAAACAAGATGGCCAAT...CCGCCAAGGGCTTCCTGAAGCTCGGCCTGAAGCAGGCCCACAGTGTGGCCATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
CDS-3UTR CCA 90 bp CTACCTGGAACTAAGGCCAAAAATTATCAGCCCTTTCGTTCTGGAAGGAGAGCTTCAGCATCACGCCCTTaGGGTTCCCAGTGGTGCCGG +
Preference number: 4 (lower is better)
Translates to: LPGTKAKNYQPFRSGRRASASRP*GSQWCR
Trigger: CCGGCACCACTGGGAACCCCAAGGGCGTGATGCTGA...AGCTCTCCTTCCAGAACGAAAGGGCTGATAATTTTTGGCCTTAGTTCCAGGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp GCATACAAGCGGATGTTGAGACCCAGGAAGAAGTGCTGTGTCTCTGCCATCATGCCAAGGTCACCGACATaGCCCACAGCAGCATCTTTC +
Preference number: 4 (lower is better)
Translates to: AYKRMLRPRKKCCVSAIMPRSPT*PTAASF
Trigger: GAAAGATGCTGCTGTGGGCCATGTCGGTGACCTTGG...CATGATGGCAGAGACACAGCACTTCTTCCTGGGTCTCAACATCCGCTTGTATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559707.5
ENST00000560124.5
CDS-3UTR CCA 90 bp CTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTATAGAAACTGCAGGCATAGTGCCTGGCGAACCTTaGCTAGCACCAGGTAATCTG +
Preference number: 4 (lower is better)
Translates to: LRKRLGTPALYSIETAGIVPGEP*LAPGNL
Trigger: CAGATTACCTGGTGCTAGCCAAGGTTCGCCAGGCAC...TATGCCTGCAGTTTCTATAGAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp GAGCAGGTAGTATTGGGAGTAGGAGATGTGTTCCCACTTGTCCTGGCGCTTGAAGTGTCTCTGCCATCATaGGGGCCGCTCCATAGAAGT +
Preference number: 4 (lower is better)
Translates to: EQVVLGVGDVFPLVLALEVSLPS*GPLHRS
Trigger: ACTTCTATGGAGCGGCCCCCATGATGGCAGAGACAC...TTCAAGCGCCAGGACAAGTGGGAACACATCTCCTACTCCCAATACTACCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559707.5
CDS-3UTR CCA 90 bp CTTGTCCTCCATGTTCAGGTAGCCCATGAATATGGTGCGGCCCCACAGGCAGATGTCAGATTATCAGTCTaGTCAGAGGTGTCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: LVLHVQVAHEYGAAPQADVRLSV*SEVSGS
Trigger: GGACCCAGACACCTCTGACCAGACTGATAATCTGAC...ATCTGCCTGTGGGGCCGCACCATATTCATGGGCTACCTGAACATGGAGGACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560124.5
CDS-3UTR CCA 90 bp CTGCCCACCCTCTGGCAGAACTCCATAGCTTGTTCAGTCAGATTATCAGTCTGGCTGCTGCCCACCCTCTaGCAGAACTCCATAGCTTGT +
Preference number: 4 (lower is better)
Translates to: LPTLWQNSIACSVRLSVWLLPTL*QNSIAC
Trigger: ACAAGCTATGGAGTTCTGCCAGAGGGTGGGCAGCAG...CCAGACTGATAATCTGACTGAACAAGCTATGGAGTTCTGCCAGAGGGTGGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560124.5
CDS-3UTR CCA 90 bp TTGAGCTTGGGCTTAGGCTTGGGCTCAGCTTTTGACCCTCAGGCATCTCCTTTCGTTTCAGTTTCATCGTaGGACCCAACTCTCCACCCG +
Preference number: 4 (lower is better)
Translates to: LSLGLGLGSAFDPQASPFVSVSS*DPTLHP
Trigger: CGGGTGGAGAGTTGGGTCCCACGATGAAACTGAAAC...GAAAGGAGATGCCTGAGGGTCAAAAGCTGAGCCCAAGCCTAAGCCCAAGCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR TCA 90 bp TCTTTTGACACTTGGCAAATCCCAGTGCCTGGCGAACCTTGGCTAGCACCAGGTTGGTGTAGATGCCAGTaGCGATGCCACCTGCAAATA +
Preference number: 4 (lower is better)
Translates to: SFDTWQIPVPGEPWLAPGWCRCQ*RCHLQI
Trigger: TATTTGCAGGTGGCATCGTCACTGGCATCTACACCA...ACCTGGTGCTAGCCAAGGTTCGCCAGGCACTGGGATTTGCCAAGTGTCAAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559707.5
CDS-3UTR TCA 90 bp AAAATTATGCCATGCTGGGGCTTGAGCTTGAGCTTGGGCTTAGGCTTGGGCTCAGAGTGCACTTCAAGGTaGGCAGCATGGACAGGAACT +
Preference number: 4 (lower is better)
Translates to: KIMPCWGLSLSLGLGLGSECTSR*AAWTGT
Trigger: AGTTCCTGTCCATGCTGCTCACCTTGAAGTGCACTC...TGAGCCCAAGCCTAAGCCCAAGCTCAAGCTCAAGCCCCAGCATGGCATAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR TCA 90 bp CTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTATAGAAACTGCAAGTCAGGTCGCTAGGTaGGTTGTGACTGATTGCTTT +
Preference number: 4 (lower is better)
Translates to: LGLRKRLGTPALYSIETASQVAR*VVTDCF
Trigger: AAAGCAATCAGTCACAACTCACCTAGCGACCTGACT...TGCAGTTTCTATAGAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR GCA 90 bp CTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTATAGAAACTGCAGGCATAAAATACTGTGCCCACTaGCGAGAAGAACCACTCCGG +
Preference number: 4 (lower is better)
Translates to: LRKRLGTPALYSIETAGIKYCAH*REEPLR
Trigger: CCGGAGTGGTTCTTCTCGGCAGTGGGCACAGTATTT...TATGCCTGCAGTTTCTATAGAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR GCA 90 bp CTGCGTGTCGACCATGATGACATTGGCGCAGCAGTCATAAGCGATGTACTGGCAAGGATCTTTTCCAGCTaGTTCTGCGTGTCGACCATG +
Preference number: 4 (lower is better)
Translates to: LRVDHDDIGAAVISDVLARIFSS*FCVSTM
Trigger: CATGGTCGACACGCAGAAGCAGCTGGAAAAGATCCT...TGCCAGTACATCGCTTATGACTGCTGCGCCAATGTCATCATGGTCGACACGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
CDS-3UTR GCA 90 bp TTGGGAGTAGGAGATGTGTTCCCACTTGTCCTGGCGCTTGAAGCCCAAAGCGATAGGATCTTTTCCAGCTaGTTCTGCGTGTCGACCATG +
Preference number: 4 (lower is better)
Translates to: LGVGDVFPLVLALEAQSDRIFSS*FCVSTM
Trigger: CATGGTCGACACGCAGAAGCAGCTGGAAAAGATCCT...ATCGCTTTGGGCTTCAAGCGCCAGGACAAGTGGGAACACATCTCCTACTCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
CDS-3UTR GCA 90 bp TCCTCAGGCACTTCATTCCCCAGCTCCATGAATTCCTCCATCGTGTACACATTGTGGGGTTCCCAGTGGTaGCGGAAGTGTAGACTAGCA +
Preference number: 4 (lower is better)
Translates to: SSGTSFPSSMNSSIVYTLWGSQW*RKCRLA
Trigger: TGCTAGTCTACACTTCCGGCACCACTGGGAACCCCA...CAATGTGTACACGATGGAGGAATTCATGGAGCTGGGGAATGAAGTGCCTGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559707.5
ENST00000560124.5
CDS-3UTR GCA 90 bp ACTAAGGCCAAAAATTATCAGCCCTTTCGTTCTGGAAGGAGAGCTGATCTCATTCTCCTGCTGGACTTCTaGCGGCCGGATGTCACCGGC +
Preference number: 4 (lower is better)
Translates to: TKAKNYQPFRSGRRADLILLLDF*RPDVTG
Trigger: GCCGGTGACATCCGGCCGGCAGAAGTCCAGCAGGAG...AATGAGATCAGCTCTCCTTCCAGAACGAAAGGGCTGATAATTTTTGGCCTTAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp ACTTCATTCCCCAGCTCCATGAATTCCTCCATCGTGTACACATTGGCCATCTTGCACTGGTTGGGCTGCTaGGTGTCAATGATGGCGTCC +
Preference number: 4 (lower is better)
Translates to: TSFPSSMNSSIVYTLAILHWLGC*VSMMAS
Trigger: GGACGCCATCATTGACACCCAGCAGCCCAACCAGTG...CAAGATGGCCAATGTGTACACGATGGAGGAATTCATGGAGCTGGGGAATGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559707.5
ENST00000560124.5
CDS-3UTR CCA 90 bp CTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTATAGAAACTGCAAGTTCTTTTGACACTTaGCAAATCCCAGTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: LGLRKRLGTPALYSIETASSFDT*QIPVPG
Trigger: GCCAGGCACTGGGATTTGCCAAGTGTCAAAAGAACT...TGCAGTTTCTATAGAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp TTGAGCTTGGGCTTAGGCTTGGGCTCAGCTTTTGACCCTCAGGCATCTCCTTTCAGTCTCTCTCGAGAATaGCCCACTTCTGGATGTGGT +
Preference number: 4 (lower is better)
Translates to: LSLGLGLGSAFDPQASPFSLSRE*PTSGCG
Trigger: ACCACATCCAGAAGTGGGCCATTCTCGAGAGAGACT...GAAAGGAGATGCCTGAGGGTCAAAAGCTGAGCCCAAGCCTAAGCCCAAGCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CCA 90 bp AGTTTCATCGTGGGACCCAACTCTCCACCCGAAATGGAGAAGTCTCTCTCGAGAGTTTCAGTTTCATCGTaGGACCCAACTCTCCACCCG +
Preference number: 4 (lower is better)
Translates to: SFIVGPNSPPEMEKSLSRVSVSS*DPTLHP
Trigger: CGGGTGGAGAGTTGGGTCCCACGATGAAACTGAAAC...TCTCGAGAGAGACTTCTCCATTTCGGGTGGAGAGTTGGGTCCCACGATGAAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560124.5
CDS-3UTR CCA 90 bp TTGAGCTTGGGCTTAGGCTTGGGCTCAGCTTTTGACCCTCAGGCATCTCCTTTCAGTAACTTGCCCAGGTaGCATCTCACTGAGGGCTTT +
Preference number: 4 (lower is better)
Translates to: LSLGLGLGSAFDPQASPFSNLPR*HLTEGF
Trigger: AAAGCCCTCAGTGAGATGCCACCTGGGCAAGTTACT...GAAAGGAGATGCCTGAGGGTCAAAAGCTGAGCCCAAGCCTAAGCCCAAGCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR TCA 90 bp CTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTATAGAAACTGCAGGCATACATTCCCCAGCTCCATaGATTCCTCCATCGTGTACA +
Preference number: 4 (lower is better)
Translates to: LRKRLGTPALYSIETAGIHSPAP*IPPSCT
Trigger: TGTACACGATGGAGGAATTCATGGAGCTGGGGAATG...TATGCCTGCAGTTTCTATAGAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR TCA 90 bp CTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTATAGAAACTGCAGGCATACACGTGATATTGTCTTaGCTCAGCATCACGCCCTTG +
Preference number: 4 (lower is better)
Translates to: LRKRLGTPALYSIETAGIHVILS*LSITPL
Trigger: CAAGGGCGTGATGCTGAGTCAAGACAATATCACGTG...TATGCCTGCAGTTTCTATAGAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR TCA 90 bp CTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTATAGAAACTGCAGGCATACATACAAGCGGATGTTaGGACCCAGGAAGAAGTGCT +
Preference number: 4 (lower is better)
Translates to: LRKRLGTPALYSIETAGIHTSGC*DPGRSA
Trigger: AGCACTTCTTCCTGGGTCTCAACATCCGCTTGTATG...TATGCCTGCAGTTTCTATAGAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR TCA 90 bp AACTACCCACACGTGAAGCTTCTTGGAATTGTCAGCTATTGTTGGCGTAAGACCTGTAGGGACTGGACATaGAGTGGGGGCCTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: NYPHVKLLGIVSYCWRKTCRDWT*SGGLRS
Trigger: AGACCTCAGGCCCCCACTTCATGTCCAGTCCCTACA...GGTCTTACGCCAACAATAGCTGACAATTCCAAGAAGCTTCACGTGTGGGTAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR TCA 90 bp TACCTGGAACTAAGGCCAAAAATTATCAGCCCTTTCGTTCTGGAAGGAGAGCTGGGGCACCAACTTGCCTaGGCTGTACAGCCGGTAGTT +
Preference number: 4 (lower is better)
Translates to: YLELRPKIISPFVLEGELGHQLA*AVQPVV
Trigger: AACTACCGGCTGTACAGCTCAGGCAAGTTGGTGCCC...CAGCTCTCCTTCCAGAACGAAAGGGCTGATAATTTTTGGCCTTAGTTCCAGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR TCA 90 bp AAGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTATAGATTCTGGAAGGAGAGCTaGTCTCATTTGTCACCTGAA +
Preference number: 4 (lower is better)
Translates to: KRPGAQEEARNACPLFYRFWKES*SHLSPE
Trigger: TTCAGGTGACAAATGAGATCAGCTCTCCTTCCAGAA...TCTATAGAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR TCA 90 bp CTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTATAGAAACTGCAGGCATATGCTGGCTTCAGGAATaGAGCTGCAGACTTTCCAGT +
Preference number: 4 (lower is better)
Translates to: LRKRLGTPALYSIETAGICWLQE*SCRLSS
Trigger: ACTGGAAAGTCTGCAGCTTCATTCCTGAAGCCAGCA...TATGCCTGCAGTTTCTATAGAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560817.5
CDS-3UTR GCA 90 bp AATTTTGGTAAAGCTCCCTGCCTCCCTTTGCATCAAGAGCACCTTATTCTTTGCCCTGTGGGGTCTCTCTaGTGTCCAGCATGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: NFGKAPCLPLHQEHLILCPVGSL*CPACWG
Trigger: ACCCCAGCATGCTGGACAGCAGAGAGACCCCACAGG...GCAAAGAATAAGGTGCTCTTGATGCAAAGGGAGGCAGGGAGCTTTACCAAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR GCA 90 bp CACTTCATTCCCCAGCTCCATGAATTCCTCCATCGTGTACACATTGGCCATCTTTGGGGTTCCCAGTGGTaGCGGAAGTGTAGACTAGCA +
Preference number: 4 (lower is better)
Translates to: HFIPQLHEFLHRVHIGHLWGSQW*RKCRLA
Trigger: TGCTAGTCTACACTTCCGGCACCACTGGGAACCCCA...AAGATGGCCAATGTGTACACGATGGAGGAATTCATGGAGCTGGGGAATGAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559707.5
ENST00000560124.5
CDS-3UTR GCA 90 bp TACCTGGAACTAAGGCCAAAAATTATCAGCCCTTTCGTTCTGGAAGGAGAGCTGGGCAGATCTCGCCAATaGCCTCTGCGTCCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: YLELRPKIISPFVLEGELGRSRQ*PLRPGS
Trigger: TGAACCAGGACGCAGAGGGCATTGGCGAGATCTGCC...CAGCTCTCCTTCCAGAACGAAAGGGCTGATAATTTTTGGCCTTAGTTCCAGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR GCA 90 bp CACAAAATTATGCCATGCTGGGGCTTGAGCTTGAGCTTGGGCTTAGGCTTGGGCCACTTGACCCCATCCTaGACCTTTGTTTATTCCAGG +
Preference number: 4 (lower is better)
Translates to: HKIMPCWGLSLSLGLGLGHLTPS*TFVYSR
Trigger: CCTGGAATAAACAAAGGTGCAGGATGGGGTCAAGTG...GCCCAAGCCTAAGCCCAAGCTCAAGCTCAAGCCCCAGCATGGCATAATTTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CCA 90 bp GCTAGCAGCTTTTTAATCTACCTGGAACTAAGGCCAAAAATTATCAGCCCTTTCTGCTGTCCAGCATGCTaGGGTCCCCGTGTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: ASSFLIYLELRPKIISPFCCPAC*GPRVGS
Trigger: GCTGCCCACACGGGGACCCCAGCATGCTGGACAGCA...GAAAGGGCTGATAATTTTTGGCCTTAGTTCCAGGTAGATTAAAAAGCTGCTAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000258873.9
ENST00000560124.5
CDS-3UTR CCA 90 bp CATTGGCCATCTTGTTTGGAGGAGGTTCTTTATATATCACGACTGCCTTTAGATTGCTGTCCAGCATGCTaGGGTCCCCGTGTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: HWPSCLEEVLYISRLPLDCCPAC*GPRVGS
Trigger: GCTGCCCACACGGGGACCCCAGCATGCTGGACAGCA...ATCTAAAGGCAGTCGTGATATATAAAGAACCTCCTCCAAACAAGATGGCCAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
CDS-3UTR CCA 90 bp AGACTGAAGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTCAATTTTTCTTGGGTaGTCCTCACAATCATGTCCT +
Preference number: 4 (lower is better)
Translates to: RLKRPGAQEEARNACPLFSIFLG*SSQSCP
Trigger: AGGACATGATTGTGAGGACCACCCAAGAAAAATTGA...GAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCTTCAGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258873.9
ENST00000560124.5
CDS-3UTR CCA 90 bp AACTACCCACACGTGAAGCTTCTTGGAATTGTCAGCTATTGTTGGCGTAAGACCCACTGGTTGGGCTGCTaGGTGTCAATGATGGCGTCC +
Preference number: 4 (lower is better)
Translates to: NYPHVKLLGIVSYCWRKTHWLGC*VSMMAS
Trigger: GGACGCCATCATTGACACCCAGCAGCCCAACCAGTG...GGTCTTACGCCAACAATAGCTGACAATTCCAAGAAGCTTCACGTGTGGGTAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp CTCAGACTTCACAGAGGAAATCTGTCGCCGAGTAAAAGATTTAGATTAACACTTCGGATGTCACCGGCCTaGCTGCCGTACCGTGCCGTC +
Preference number: 4 (lower is better)
Translates to: LRLHRGNLSPSKRFRLTLRMSPA*LPYRAV
Trigger: GACGGCACGGTACGGCAGCCAGGCCGGTGACATCCG...AAGTGTTAATCTAAATCTTTTACTCGGCGACAGATTTCCTCTGTGAAGTCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CCA 90 bp AAAATTATGCCATGCTGGGGCTTGAGCTTGAGCTTGGGCTTAGGCTTGGGCTCAGTCAGATTATCAGTCTaGTCAGAGGTGTCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: KIMPCWGLSLSLGLGLGSVRLSV*SEVSGS
Trigger: GGACCCAGACACCTCTGACCAGACTGATAATCTGAC...TGAGCCCAAGCCTAAGCCCAAGCTCAAGCTCAAGCCCCAGCATGGCATAATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CCA 90 bp AACTACCCACACGTGAAGCTTCTTGGAATTGTCAGCTATTGTTGGCGTAAGACCGGATCCCCTCTTCGATaGCCTGGTACACGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: NYPHVKLLGIVSYCWRKTGSPLR*PGTRPH
Trigger: ATGAGGCCGTGTACCAGGCCATCGAAGAGGGGATCC...GGTCTTACGCCAACAATAGCTGACAATTCCAAGAAGCTTCACGTGTGGGTAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp TCTTTTGACACTTGGCAAATCCCAGTGCCTGGCGAACCTTGGCTAGCACCAGGTACTCTCCACCCGAAATaGAGAAGTCTCTCTCGAGAA +
Preference number: 4 (lower is better)
Translates to: SFDTWQIPVPGEPWLAPGTLHPK*RSLSRE
Trigger: TTCTCGAGAGAGACTTCTCCATTTCGGGTGGAGAGT...ACCTGGTGCTAGCCAAGGTTCGCCAGGCACTGGGATTTGCCAAGTGTCAAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560124.5
CDS-3UTR CCA 90 bp AGGTTCTGCTCCAAGGTCACCGACATGGCCCACAGCAGCATCTTTCGCCGGATGACACGTGAAGCTTCTTaGAATTGTCAGCTATTGTTG +
Preference number: 4 (lower is better)
Translates to: RFCSKVTDMAHSSIFRRMTREAS*NCQLLL
Trigger: CAACAATAGCTGACAATTCCAAGAAGCTTCACGTGT...CATCCGGCGAAAGATGCTGCTGTGGGCCATGTCGGTGACCTTGGAGCAGAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560124.5
CDS-3UTR CCA 90 bp CAGACTGAAGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTACACGTGAAGCTTCTTaGAATTGTCAGCTATTGTTG +
Preference number: 4 (lower is better)
Translates to: QTEETWGSGRGSERLPSITREAS*NCQLLL
Trigger: CAACAATAGCTGACAATTCCAAGAAGCTTCACGTGT...AATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCTTCAGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp ACTTCATTCCCCAGCTCCATGAATTCCTCCATCGTGTACACATTGGCCATCTTGAAGTCAGTTGGCATGTaGGTGGCGGAGTGCCTGGTA +
Preference number: 4 (lower is better)
Translates to: TSFPSSMNSSIVYTLAILKSVGM*VAECLV
Trigger: TACCAGGCACTCCGCCACCCACATGCCAACTGACTT...CAAGATGGCCAATGTGTACACGATGGAGGAATTCATGGAGCTGGGGAATGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560124.5
CDS-3UTR TCA 90 bp ACTAAGGCCAAAAATTATCAGCCCTTTCGTTCTGGAAGGAGAGCTGATCTCATTCATGAAGTGGGGGCCTaGGGTCTCACTGAGGCCGTA +
Preference number: 4 (lower is better)
Translates to: TKAKNYQPFRSGRRADLIHEVGA*GLTEAV
Trigger: TACGGCCTCAGTGAGACCTCAGGCCCCCACTTCATG...AATGAGATCAGCTCTCCTTCCAGAACGAAAGGGCTGATAATTTTTGGCCTTAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR TCA 90 bp TACCTGGAACTAAGGCCAAAAATTATCAGCCCTTTCGTTCTGGAAGGAGAGCTGTGTTCAGGTAGCCCATaGATATGGTGCGGCCCCACA +
Preference number: 4 (lower is better)
Translates to: YLELRPKIISPFVLEGELCSGSP*IWCGPT
Trigger: TGTGGGGCCGCACCATATTCATGGGCTACCTGAACA...CAGCTCTCCTTCCAGAACGAAAGGGCTGATAATTTTTGGCCTTAGTTCCAGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR TCA 90 bp AACTACCCACACGTGAAGCTTCTTGGAATTGTCAGCTATTGTTGGCGTAAGACCTTCCTGCAGCGCACGTaGGCAGTATCAGCCATCTCT +
Preference number: 4 (lower is better)
Translates to: NYPHVKLLGIVSYCWRKTFLQRT*AVSAIS
Trigger: AGAGATGGCTGATACTGCTCACGTGCGCTGCAGGAA...GGTCTTACGCCAACAATAGCTGACAATTCCAAGAAGCTTCACGTGTGGGTAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR TCA 90 bp GTTGTGACTGATTGCTTTTCCTGCAGCGCACGTGAGCAGTATCAGCCATCTCTCTCGCTAGGTGAGTTGTaGCTGATTGCTTTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: VVTDCFSCSAREQYQPSLSLGEL*LIAFPA
Trigger: TGCAGGAAAAGCAATCAGTCACAACTCACCTAGCGA...GAGAGATGGCTGATACTGCTCACGTGCGCTGCAGGAAAAGCAATCAGTCACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR TCA 90 bp GGTCACTCGCATGCCCGCTGTGCACAGTCCTGTGAGTTAAATGCCCACTACTCTTCTCAGGTCTATTCCTaGGACATATTTCCCAAGGAT +
Preference number: 4 (lower is better)
Translates to: GHSHARCAQSCELNAHYSSQVYS*DIFPKD
Trigger: ATCCTTGGGAAATATGTCTCAGGAATAGACCTGAGA...AGAGTAGTGGGCATTTAACTCACAGGACTGTGCACAGCGGGCATGCGAGTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR GCA 90 bp CAGCTTTTTAATCTACCTGGAACTAAGGCCAAAAATTATCAGCCCTTTCGTTCTCTCTGCTGTCCAGCATaGTGGGGTCCCCGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: QLFNLPGTKAKNYQPFRSLCCPA*WGPRVG
Trigger: GCCCACACGGGGACCCCAGCATGCTGGACAGCAGAG...AGAACGAAAGGGCTGATAATTTTTGGCCTTAGTTCCAGGTAGATTAAAAAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000258873.9
ENST00000560124.5
CDS-3UTR GCA 90 bp CACTTCATTCCCCAGCTCCATGAATTCCTCCATCGTGTACACATTGGCCATCTTAAATACTGTGCCCACTaGCGAGAAGAACCACTCCGG +
Preference number: 4 (lower is better)
Translates to: HFIPQLHEFLHRVHIGHLKYCAH*REEPLR
Trigger: CCGGAGTGGTTCTTCTCGGCAGTGGGCACAGTATTT...AAGATGGCCAATGTGTACACGATGGAGGAATTCATGGAGCTGGGGAATGAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559707.5
CDS-3UTR GCA 90 bp GGTTCTTTATATATCACGACTGCCTTTAGATGTGGCAACTGTTTCCAGATCTTCCTGACTACCACCTCCTaGTGGACTTCTGCCGGCCGG +
Preference number: 4 (lower is better)
Translates to: GSLYITTAFRCGNCFQIFLTTTS*WTSAGR
Trigger: CCGGCCGGCAGAAGTCCAGCAGGAGGTGGTAGTCAG...GAAGATCTGGAAACAGTTGCCACATCTAAAGGCAGTCGTGATATATAAAGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559707.5
CDS-3UTR GCA 90 bp TCTGCTGCCCACCCTCTGGCAGAACTCCATAGCTTGTTCAGTCAGATTATCAGTGAGGCTCGGAACGCCTaGCCTCTATTCTATAGAAAC +
Preference number: 4 (lower is better)
Translates to: SAAHPLAELHSLFSQIISEARNA*PLFYRN
Trigger: GTTTCTATAGAATAGAGGGCAGGCGTTCCGAGCCTC...ACTGATAATCTGACTGAACAAGCTATGGAGTTCTGCCAGAGGGTGGGCAGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560124.5
CDS-3UTR GCA 90 bp GTTGTGACTGATTGCTTTTCCTGCAGCGCACGTGAGCAGTATCAGCCATCTCTCACTGATTGCTTTTCCTaGAGCGCACGTGAGCAGTAT +
Preference number: 4 (lower is better)
Translates to: VVTDCFSCSAREQYQPSLTDCFS*SAREQY
Trigger: ATACTGCTCACGTGCGCTGCAGGAAAAGCAATCAGT...GAGAGATGGCTGATACTGCTCACGTGCGCTGCAGGAAAAGCAATCAGTCACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp GCTAGCAGCTTTTTAATCTACCTGGAACTAAGGCCAAAAATTATCAGCCCTTTCGAAGCTGTGGGCAGCTaGGGTCTATGCGCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: ASSFLIYLELRPKIISPFEAVGS*GLCAGA
Trigger: TGCGCCTGCGCATAGACCCCAGCTGCCCACAGCTTC...GAAAGGGCTGATAATTTTTGGCCTTAGTTCCAGGTAGATTAAAAAGCTGCTAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CCA 90 bp AACTACCCACACGTGAAGCTTCTTGGAATTGTCAGCTATTGTTGGCGTAAGACCCCTTGGGGTTCCCAGTaGTGCCGGAAGTGTAGACTA +
Preference number: 4 (lower is better)
Translates to: NYPHVKLLGIVSYCWRKTPWGSQ*CRKCRL
Trigger: TAGTCTACACTTCCGGCACCACTGGGAACCCCAAGG...GGTCTTACGCCAACAATAGCTGACAATTCCAAGAAGCTTCACGTGTGGGTAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp ATCTTGTTTGGAGGAGGTTCTTTATATATCACGACTGCCTTTAGATGTGGCAACTCAGCATCACGCCCTTaGGGTTCCCAGTGGTGCCGG +
Preference number: 4 (lower is better)
Translates to: ILFGGGSLYITTAFRCGNSASRP*GSQWCR
Trigger: CCGGCACCACTGGGAACCCCAAGGGCGTGATGCTGA...GTTGCCACATCTAAAGGCAGTCGTGATATATAAAGAACCTCCTCCAAACAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559707.5
CDS-3UTR CCA 90 bp ACTGAATTAAAACTACCCACACGTGAAGCTTCTTGGAATTGTCAGCTATTGTTGCCCCCATGTGTGATGTaGGCTCCACCTCCCGCAGCG +
Preference number: 4 (lower is better)
Translates to: TELKLPTREASWNCQLLLPPCVM*APPPAA
Trigger: CGCTGCGGGAGGTGGAGCCCACATCACACATGGGGG...CAACAATAGCTGACAATTCCAAGAAGCTTCACGTGTGGGTAGTTTTAATTCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp CTACCTGGAACTAAGGCCAAAAATTATCAGCCCTTTCGTTCTGGAAGGAGAGCTCCAAGGTCACCGACATaGCCCACAGCAGCATCTTTC +
Preference number: 4 (lower is better)
Translates to: LPGTKAKNYQPFRSGRRAPRSPT*PTAASF
Trigger: GAAAGATGCTGCTGTGGGCCATGTCGGTGACCTTGG...AGCTCTCCTTCCAGAACGAAAGGGCTGATAATTTTTGGCCTTAGTTCCAGGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp CTACCTGGAACTAAGGCCAAAAATTATCAGCCCTTTCGTTCTGGAAGGAGAGCTGACAGGAACTTCCTCTaGTCCCCAATGAGCATGGCG +
Preference number: 4 (lower is better)
Translates to: LPGTKAKNYQPFRSGRRADRNFL*SPMSMA
Trigger: CGCCATGCTCATTGGGGACCAGAGGAAGTTCCTGTC...AGCTCTCCTTCCAGAACGAAAGGGCTGATAATTTTTGGCCTTAGTTCCAGGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp TACCTGGAACTAAGGCCAAAAATTATCAGCCCTTTCGTTCTGGAAGGAGAGCTGGACAGGAACTTCCTCTaGTCCCCAATGAGCATGGCG +
Preference number: 4 (lower is better)
Translates to: YLELRPKIISPFVLEGELDRNFL*SPMSMA
Trigger: CGCCATGCTCATTGGGGACCAGAGGAAGTTCCTGTC...CAGCTCTCCTTCCAGAACGAAAGGGCTGATAATTTTTGGCCTTAGTTCCAGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp TCTGCTGCCCACCCTCTGGCAGAACTCCATAGCTTGTTCAGTCAGATTATCAGTAGTCTCTCTCGAGAATaGCCCACTTCTGGATGTGGT +
Preference number: 4 (lower is better)
Translates to: SAAHPLAELHSLFSQIISSLSRE*PTSGCG
Trigger: ACCACATCCAGAAGTGGGCCATTCTCGAGAGAGACT...ACTGATAATCTGACTGAACAAGCTATGGAGTTCTGCCAGAGGGTGGGCAGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560124.5
CDS-3UTR CCA 90 bp AACTACCCACACGTGAAGCTTCTTGGAATTGTCAGCTATTGTTGGCGTAAGACCAAGTCAGTTGGCATGTaGGTGGCGGAGTGCCTGGTA +
Preference number: 4 (lower is better)
Translates to: NYPHVKLLGIVSYCWRKTKSVGM*VAECLV
Trigger: TACCAGGCACTCCGCCACCCACATGCCAACTGACTT...GGTCTTACGCCAACAATAGCTGACAATTCCAAGAAGCTTCACGTGTGGGTAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp CAAACAGGCAGCAGCAGTTTTATTAAGCATCAAGTCAGTTGGCATGTGGGTGGCAAGCATCAAGTCAGTTaGCATGTGGGTGGCGGAGTG +
Preference number: 4 (lower is better)
Translates to: QTGSSSFIKHQVSWHVGGKHQVS*HVGGGV
Trigger: CACTCCGCCACCCACATGCCAACTGACTTGATGCTT...GCCACCCACATGCCAACTGACTTGATGCTTAATAAAACTGCTGCTGCCTGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258873.9
ENST00000560124.5
CDS-3UTR CCA 90 bp GAGCAGGTAGTATTGGGAGTAGGAGATGTGTTCCCACTTGTCCTGGCGCTTGAACCACAGCGCCTCCTCTaGTTTTCAATTTTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: EQVVLGVGDVFPLVLALEPQRLL*FSIFLG
Trigger: CCCAAGAAAAATTGAAAACCAGAGGAGGCGCTGTGG...TTCAAGCGCCAGGACAAGTGGGAACACATCTCCTACTCCCAATACTACCTGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559707.5
3UTR CAA 72 bp AACGTAGAGCTGGCTGCTTTTATGAGAATGCGCCACTaGACCCCATCCTGCACCTTTGTTTATTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: NVELAAFMRMRH*TPSCTFVYSRA
Trigger: TGCCCTGGAATAAACAAAGGTGCAGGATGGGGTCAAGTGGCGCATTCTCATAAAAGCAGCCAGCTCTACGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR TCA 90 bp GCTAGCAGCTTTTTAATCTACCTGGAACTAAGGCCAAAAATTATCAGCCCTTTCCTGCCAGTCTGGTTGTaGAGGGCTTCAGGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: ASSFLIYLELRPKIISPFLPVWL*RASGRC
Trigger: GCAGCGACCTGAAGCCCTTCACAACCAGACTGGCAG...GAAAGGGCTGATAATTTTTGGCCTTAGTTCCAGGTAGATTAAAAAGCTGCTAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR TCA 90 bp CAGCTTTTTAATCTACCTGGAACTAAGGCCAAAAATTATCAGCCCTTTCGTTCTGGCCTGAGGTCTCACTaGGGCCGTAGCCCGCATACA +
Preference number: 4 (lower is better)
Translates to: QLFNLPGTKAKNYQPFRSGLRSH*GRSPHT
Trigger: TGTATGCGGGCTACGGCCTCAGTGAGACCTCAGGCC...AGAACGAAAGGGCTGATAATTTTTGGCCTTAGTTCCAGGTAGATTAAAAAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR TCA 90 bp ATCTTGTTTGGAGGAGGTTCTTTATATATCACGACTGCCTTTAGATGTGGCAACCATGAAGTGGGGGCCTaGGGTCTCACTGAGGCCGTA +
Preference number: 4 (lower is better)
Translates to: ILFGGGSLYITTAFRCGNHEVGA*GLTEAV
Trigger: TACGGCCTCAGTGAGACCTCAGGCCCCCACTTCATG...GTTGCCACATCTAAAGGCAGTCGTGATATATAAAGAACCTCCTCCAAACAAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559707.5
CDS-3UTR TCA 90 bp CAAACAGGCAGCAGCAGTTTTATTAAGCATCAAGTCAGTTGGCATGTGGGTGGCCATCCTTCTTCTCTATaGTCTCGGACACTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: QTGSSSFIKHQVSWHVGGHPSSL*SRTLWW
Trigger: CCACCACAGTGTCCGAGATCATAGAGAAGAAGGATG...GCCACCCACATGCCAACTGACTTGATGCTTAATAAAACTGCTGCTGCCTGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258873.9
ENST00000560124.5
CDS-3UTR TCA 90 bp GTTGTGACTGATTGCTTTTCCTGCAGCGCACGTGAGCAGTATCAGCCATCTCTCACTTCTCCAAAACTGTaGGCCGTTTCAGTTTCATCG +
Preference number: 4 (lower is better)
Translates to: VVTDCFSCSAREQYQPSLTSPKL*AVSVSS
Trigger: CGATGAAACTGAAACGGCTCACAGTTTTGGAGAAGT...GAGAGATGGCTGATACTGCTCACGTGCGCTGCAGGAAAAGCAATCAGTCACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR TCA 90 bp GGTCACTCGCATGCCCGCTGTGCACAGTCCTGTGAGTTAAATGCCCACTACTCTGGTAAAAGGAGTCAATaGTACCTTTGTACTTCTCCA +
Preference number: 4 (lower is better)
Translates to: GHSHARCAQSCELNAHYSGKRSQ*YLCTSP
Trigger: TGGAGAAGTACAAAGGTATCATTGACTCCTTTTACC...AGAGTAGTGGGCATTTAACTCACAGGACTGTGCACAGCGGGCATGCGAGTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR TCA 90 bp AAGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTATAGAGGTAAAAGGAGTCAATaGTACCTTTGTACTTCTCCA +
Preference number: 4 (lower is better)
Translates to: KRPGAQEEARNACPLFYRGKRSQ*YLCTSP
Trigger: TGGAGAAGTACAAAGGTATCATTGACTCCTTTTACC...TCTATAGAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR TCA 90 bp AAAATTATGCCATGCTGGGGCTTGAGCTTGAGCTTGGGCTTAGGCTTGGGCTCATGGCTGTCCTGTATGTaGGCTAGCAGCTTTTTAATC +
Preference number: 4 (lower is better)
Translates to: KIMPCWGLSLSLGLGLGSWLSCM*ASSFLI
Trigger: GATTAAAAAGCTGCTAGCTCACATACAGGACAGCCA...TGAGCCCAAGCCTAAGCCCAAGCTCAAGCTCAAGCCCCAGCATGGCATAATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR TCA 90 bp GTTGTGACTGATTGCTTTTCCTGCAGCGCACGTGAGCAGTATCAGCCATCTCTCTGGCTGTCCTGTATGTaGGCTAGCAGCTTTTTAATC +
Preference number: 4 (lower is better)
Translates to: VVTDCFSCSAREQYQPSLWLSCM*ASSFLI
Trigger: GATTAAAAAGCTGCTAGCTCACATACAGGACAGCCA...GAGAGATGGCTGATACTGCTCACGTGCGCTGCAGGAAAAGCAATCAGTCACAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR GCA 90 bp AATTTTGGTAAAGCTCCCTGCCTCCCTTTGCATCAAGAGCACCTTATTCTTTGCGAATTGCGTGGCATCTaGCTCGGGCTTCCACTGAAG +
Preference number: 4 (lower is better)
Translates to: NFGKAPCLPLHQEHLILCELRGI*LGLPLK
Trigger: CTTCAGTGGAAGCCCGAGGCAGATGCCACGCAATTC...GCAAAGAATAAGGTGCTCTTGATGCAAAGGGAGGCAGGGAGCTTTACCAAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR GCA 90 bp ACTAAGGCCAAAAATTATCAGCCCTTTCGTTCTGGAAGGAGAGCTGATCTCATTATCCAGCTCCAGAATTaGGTGGCATCTGCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: TKAKNYQPFRSGRRADLIIQLQN*VASASG
Trigger: GCCCGAGGCAGATGCCACGCAATTCTGGAGCTGGAT...AATGAGATCAGCTCTCCTTCCAGAACGAAAGGGCTGATAATTTTTGGCCTTAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258873.9
ENST00000560124.5
CDS-3UTR GCA 90 bp AATTTTGGTAAAGCTCCCTGCCTCCCTTTGCATCAAGAGCACCTTATTCTTTGCTGGGGTTCCCAGTGGTaGCGGAAGTGTAGACTAGCA +
Preference number: 4 (lower is better)
Translates to: NFGKAPCLPLHQEHLILCWGSQW*RKCRLA
Trigger: TGCTAGTCTACACTTCCGGCACCACTGGGAACCCCA...GCAAAGAATAAGGTGCTCTTGATGCAAAGGGAGGCAGGGAGCTTTACCAAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR GCA 90 bp ACTAAGGCCAAAAATTATCAGCCCTTTCGTTCTGGAAGGAGAGCTGATCTCATTGGCAGATCTCGCCAATaGCCTCTGCGTCCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: TKAKNYQPFRSGRRADLIGRSRQ*PLRPGS
Trigger: TGAACCAGGACGCAGAGGGCATTGGCGAGATCTGCC...AATGAGATCAGCTCTCCTTCCAGAACGAAAGGGCTGATAATTTTTGGCCTTAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR GCA 90 bp ACTGAATTAAAACTACCCACACGTGAAGCTTCTTGGAATTGTCAGCTATTGTTGCCAGCATCACCCGTGTaGAGCCAGCCTTCCTCGTCG +
Preference number: 4 (lower is better)
Translates to: TELKLPTREASWNCQLLLPASPV*SQPSSS
Trigger: CGACGAGGAAGGCTGGCTGCACACGGGTGATGCTGG...CAACAATAGCTGACAATTCCAAGAAGCTTCACGTGTGGGTAGTTTTAATTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR GCA 90 bp TGCAGCGCACGTGAGCAGTATCAGCCATCTCTCTCCTACCCGCTCCACAGCCTATTATTCTTTGCAGAGTaGTGTTGTATACACTATGAG +
Preference number: 4 (lower is better)
Translates to: CSAREQYQPSLSYPLHSLLFFAE*CCIHYE
Trigger: CTCATAGTGTATACAACAGCACTCTGCAAAGAATAA...TAGGCTGTGGAGCGGGTAGGAGAGAGATGGCTGATACTGCTCACGTGCGCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CCA 90 bp GATGCCAGTGACGATGCCACCTGCAAATACTGTGCCCACTGCCGAGAAGAACCATCAATTTTTCTTGGGTaGTCCTCACAATCATGTCCT +
Preference number: 4 (lower is better)
Translates to: DASDDATCKYCAHCREEPSIFLG*SSQSCP
Trigger: AGGACATGATTGTGAGGACCACCCAAGAAAAATTGA...TGGTTCTTCTCGGCAGTGGGCACAGTATTTGCAGGTGGCATCGTCACTGGCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
CDS-3UTR CCA 90 bp AGACTGAAGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCATTGGCCATCTTGTTTaGAGGAGGTTCTTTATATAT +
Preference number: 4 (lower is better)
Translates to: RLKRPGAQEEARNACPLFIGHLV*RRFFIY
Trigger: ATATATAAAGAACCTCCTCCAAACAAGATGGCCAAT...GAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCTTCAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp ACTAAGGCCAAAAATTATCAGCCCTTTCGTTCTGGAAGGAGAGCTGATCTCATTCACTGGTTGGGCTGCTaGGTGTCAATGATGGCGTCC +
Preference number: 4 (lower is better)
Translates to: TKAKNYQPFRSGRRADLIHWLGC*VSMMAS
Trigger: GGACGCCATCATTGACACCCAGCAGCCCAACCAGTG...AATGAGATCAGCTCTCCTTCCAGAACGAAAGGGCTGATAATTTTTGGCCTTAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp ACTGAATTAAAACTACCCACACGTGAAGCTTCTTGGAATTGTCAGCTATTGTTGTCAGCATCACGCCCTTaGGGTTCCCAGTGGTGCCGG +
Preference number: 4 (lower is better)
Translates to: TELKLPTREASWNCQLLLSASRP*GSQWCR
Trigger: CCGGCACCACTGGGAACCCCAAGGGCGTGATGCTGA...CAACAATAGCTGACAATTCCAAGAAGCTTCACGTGTGGGTAGTTTTAATTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp CTACCTGGAACTAAGGCCAAAAATTATCAGCCCTTTCGTTCTGGAAGGAGAGCTAGCCTTCCTCGTCGATaGCCTCACAAGTCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: LPGTKAKNYQPFRSGRRASLPRR*PHKSCP
Trigger: AGGACAAGACTTGTGAGGCCATCGACGAGGAAGGCT...AGCTCTCCTTCCAGAACGAAAGGGCTGATAATTTTTGGCCTTAGTTCCAGGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp AACTACCCACACGTGAAGCTTCTTGGAATTGTCAGCTATTGTTGGCGTAAGACCCTGGTCAGAGGTGTCTaGGTCCAGAGTGCACTTCAA +
Preference number: 4 (lower is better)
Translates to: NYPHVKLLGIVSYCWRKTLVRGV*VQSALQ
Trigger: TTGAAGTGCACTCTGGACCCAGACACCTCTGACCAG...GGTCTTACGCCAACAATAGCTGACAATTCCAAGAAGCTTCACGTGTGGGTAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp AACTACCCACACGTGAAGCTTCTTGGAATTGTCAGCTATTGTTGGCGTAAGACCGTTTCAGTTTCATCGTaGGACCCAACTCTCCACCCG +
Preference number: 4 (lower is better)
Translates to: NYPHVKLLGIVSYCWRKTVSVSS*DPTLHP
Trigger: CGGGTGGAGAGTTGGGTCCCACGATGAAACTGAAAC...GGTCTTACGCCAACAATAGCTGACAATTCCAAGAAGCTTCACGTGTGGGTAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp AGAGAGGTGCCTGAATTACATAGTGGGCCCTTTTATTGTGTAGGATGGAAAGATGGAAGTGGGGTGGTCTaGTGGCGACAGGCTAACGTA +
Preference number: 4 (lower is better)
Translates to: REVPELHSGPFYCVGWKDGSGVV*WRQANV
Trigger: TACGTTAGCCTGTCGCCACCAGACCACCCCACTTCC...ATCTTTCCATCCTACACAATAAAAGGGCCCACTATGTAATTCAGGCACCTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CCA 90 bp AGACTGAAGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCGCTTTAAAATCTCCTTaGTTTAGTTTAGTTTGCGGA +
Preference number: 4 (lower is better)
Translates to: RLKRPGAQEEARNACPLFALKSP*FSLVCG
Trigger: TCCGCAAACTAAACTAAACCAAGGAGATTTTAAAGC...GAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCTTCAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258873.9
3UTR CAA 72 bp TATTCTTTGCAGAGTGCTGTTGTATACACTATGAGATaGGATCCCGATCCTCCTGGGCTGGGTAGATGGTGG +
Preference number: 4 (lower is better)
Translates to: YSLQSAVVYTMR*DPDPPGLGRWW
Trigger: CCACCATCTACCCAGCCCAGGAGGATCGGGATCCAATCTCATAGTGTATACAACAGCACTCTGCAAAGAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR TCA 90 bp AACTACCCACACGTGAAGCTTCTTGGAATTGTCAGCTATTGTTGGCGTAAGACCCATTCCCCAGCTCCATaGATTCCTCCATCGTGTACA +
Preference number: 4 (lower is better)
Translates to: NYPHVKLLGIVSYCWRKTHSPAP*IPPSCT
Trigger: TGTACACGATGGAGGAATTCATGGAGCTGGGGAATG...GGTCTTACGCCAACAATAGCTGACAATTCCAAGAAGCTTCACGTGTGGGTAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR TCA 90 bp CTACCTGGAACTAAGGCCAAAAATTATCAGCCCTTTCGTTCTGGAAGGAGAGCTCATTCCCCAGCTCCATaGATTCCTCCATCGTGTACA +
Preference number: 4 (lower is better)
Translates to: LPGTKAKNYQPFRSGRRAHSPAP*IPPSCT
Trigger: TGTACACGATGGAGGAATTCATGGAGCTGGGGAATG...AGCTCTCCTTCCAGAACGAAAGGGCTGATAATTTTTGGCCTTAGTTCCAGGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR TCA 90 bp CTCAGACTTCACAGAGGAAATCTGTCGCCGAGTAAAAGATTTAGATTAACACTTCCTGGATGCGCTCCATaGTCTTCTCCCATACCCGGG +
Preference number: 4 (lower is better)
Translates to: LRLHRGNLSPSKRFRLTLPGCAP*SSPIPG
Trigger: CCCGGGTATGGGAGAAGATCATGGAGCGCATCCAGG...AAGTGTTAATCTAAATCTTTTACTCGGCGACAGATTTCCTCTGTGAAGTCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR TCA 90 bp CAGCTTTTTAATCTACCTGGAACTAAGGCCAAAAATTATCAGCCCTTTCGTTCTCCTGGATGCGCTCCATaGTCTTCTCCCATACCCGGG +
Preference number: 4 (lower is better)
Translates to: QLFNLPGTKAKNYQPFRSPGCAP*SSPIPG
Trigger: CCCGGGTATGGGAGAAGATCATGGAGCGCATCCAGG...AGAACGAAAGGGCTGATAATTTTTGGCCTTAGTTCCAGGTAGATTAAAAAGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR TCA 90 bp CTCAGACTTCACAGAGGAAATCTGTCGCCGAGTAAAAGATTTAGATTAACACTTGCATCTTTCGCCGGATaGAGCCAGACTGAGCCGCCA +
Preference number: 4 (lower is better)
Translates to: LRLHRGNLSPSKRFRLTLASFAG*SQTEPP
Trigger: TGGCGGCTCAGTCTGGCTTCATCCGGCGAAAGATGC...AAGTGTTAATCTAAATCTTTTACTCGGCGACAGATTTCCTCTGTGAAGTCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR TCA 90 bp ACTGAATTAAAACTACCCACACGTGAAGCTTCTTGGAATTGTCAGCTATTGTTGCTGCCAGTCTGGTTGTaGAGGGCTTCAGGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: TELKLPTREASWNCQLLLLPVWL*RASGRC
Trigger: GCAGCGACCTGAAGCCCTTCACAACCAGACTGGCAG...CAACAATAGCTGACAATTCCAAGAAGCTTCACGTGTGGGTAGTTTTAATTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR TCA 90 bp TACCTGGAACTAAGGCCAAAAATTATCAGCCCTTTCGTTCTGGAAGGAGAGCTGCATACAAGCGGATGTTaGGACCCAGGAAGAAGTGCT +
Preference number: 4 (lower is better)
Translates to: YLELRPKIISPFVLEGELHTSGC*DPGRSA
Trigger: AGCACTTCTTCCTGGGTCTCAACATCCGCTTGTATG...CAGCTCTCCTTCCAGAACGAAAGGGCTGATAATTTTTGGCCTTAGTTCCAGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR GCA 90 bp ATTCCAAAACTGAGATGTTTGCTTTCTCTACCTGTTTCCTGTTCAGATGCCTTCCTCACAATCATGTCCTaGCGGCTCTCCTGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: IPKLRCLLSLPVSCSDAFLTIMS*RLSCGV
Trigger: GACCCCACAGGAGAGCCGGCAGGACATGATTGTGAG...GAAGGCATCTGAACAGGAAACAGGTAGAGAAAGCAAACATCTCAGTTTTGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR GCA 90 bp GGTTCTTTATATATCACGACTGCCTTTAGATGTGGCAACTGTTTCCAGATCTTCCTCACAATCATGTCCTaGCGGCTCTCCTGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: GSLYITTAFRCGNCFQIFLTIMS*RLSCGV
Trigger: GACCCCACAGGAGAGCCGGCAGGACATGATTGTGAG...GAAGATCTGGAAACAGTTGCCACATCTAAAGGCAGTCGTGATATATAAAGAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
CDS-3UTR GCA 90 bp AATTTTGGTAAAGCTCCCTGCCTCCCTTTGCATCAAGAGCACCTTATTCTTTGCCACCTGCAAATACTGTaGCCACTGCCGAGAAGAACC +
Preference number: 4 (lower is better)
Translates to: NFGKAPCLPLHQEHLILCHLQIL*PLPRRT
Trigger: GGTTCTTCTCGGCAGTGGGCACAGTATTTGCAGGTG...GCAAAGAATAAGGTGCTCTTGATGCAAAGGGAGGCAGGGAGCTTTACCAAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR GCA 90 bp ACTAAGGCCAAAAATTATCAGCCCTTTCGTTCTGGAAGGAGAGCTGATCTCATTTGGGGTTCCCAGTGGTaGCGGAAGTGTAGACTAGCA +
Preference number: 4 (lower is better)
Translates to: TKAKNYQPFRSGRRADLIWGSQW*RKCRLA
Trigger: TGCTAGTCTACACTTCCGGCACCACTGGGAACCCCA...AATGAGATCAGCTCTCCTTCCAGAACGAAAGGGCTGATAATTTTTGGCCTTAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR GCA 90 bp CAGCTTTTTAATCTACCTGGAACTAAGGCCAAAAATTATCAGCCCTTTCGTTCTAGCCGGGCACCAACTTaGCTGAGCTGTACAGCCGGT +
Preference number: 4 (lower is better)
Translates to: QLFNLPGTKAKNYQPFRSSRAPT*LSCTAG
Trigger: ACCGGCTGTACAGCTCAGGCAAGTTGGTGCCCGGCT...AGAACGAAAGGGCTGATAATTTTTGGCCTTAGTTCCAGGTAGATTAAAAAGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR GCA 90 bp ACTGAATTAAAACTACCCACACGTGAAGCTTCTTGGAATTGTCAGCTATTGTTGAGCCGGGCACCAACTTaGCTGAGCTGTACAGCCGGT +
Preference number: 4 (lower is better)
Translates to: TELKLPTREASWNCQLLLSRAPT*LSCTAG
Trigger: ACCGGCTGTACAGCTCAGGCAAGTTGGTGCCCGGCT...CAACAATAGCTGACAATTCCAAGAAGCTTCACGTGTGGGTAGTTTTAATTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR GCA 90 bp CAGCTTTTTAATCTACCTGGAACTAAGGCCAAAAATTATCAGCCCTTTCGTTCTACACTGTGGTGGCTCTaGTGCCCACCCTCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: QLFNLPGTKAKNYQPFRSTLWWL*CPPSGR
Trigger: TCTGCCAGAGGGTGGGCAGCAGAGCCACCACAGTGT...AGAACGAAAGGGCTGATAATTTTTGGCCTTAGTTCCAGGTAGATTAAAAAGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR GCA 90 bp ACTGAATTAAAACTACCCACACGTGAAGCTTCTTGGAATTGTCAGCTATTGTTGACACTGTGGTGGCTCTaGTGCCCACCCTCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: TELKLPTREASWNCQLLLTLWWL*CPPSGR
Trigger: TCTGCCAGAGGGTGGGCAGCAGAGCCACCACAGTGT...CAACAATAGCTGACAATTCCAAGAAGCTTCACGTGTGGGTAGTTTTAATTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR GCA 90 bp AACTACCCACACGTGAAGCTTCTTGGAATTGTCAGCTATTGTTGGCGTAAGACCGAGGCTCGGAACGCCTaGCCTCTATTCTATAGAAAC +
Preference number: 4 (lower is better)
Translates to: NYPHVKLLGIVSYCWRKTEARNA*PLFYRN
Trigger: GTTTCTATAGAATAGAGGGCAGGCGTTCCGAGCCTC...GGTCTTACGCCAACAATAGCTGACAATTCCAAGAAGCTTCACGTGTGGGTAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR GCA 90 bp CAAACAGGCAGCAGCAGTTTTATTAAGCATCAAGTCAGTTGGCATGTGGGTGGCGCTACTGAGAATGGCTaGTTCCCGTATTCAGAATGG +
Preference number: 4 (lower is better)
Translates to: QTGSSSFIKHQVSWHVGGATENG*FPYSEW
Trigger: CCATTCTGAATACGGGAAGCAGCCATTCTCAGTAGC...GCCACCCACATGCCAACTGACTTGATGCTTAATAAAACTGCTGCTGCCTGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR GCA 90 bp GTTGTGACTGATTGCTTTTCCTGCAGCGCACGTGAGCAGTATCAGCCATCTCTCAGATTTGGGAGGCAATaGAAAATGCTCAGACTTCAC +
Preference number: 4 (lower is better)
Translates to: VVTDCFSCSAREQYQPSLRFGRQ*KMLRLH
Trigger: GTGAAGTCTGAGCATTTTGCATTGCCTCCCAAATCT...GAGAGATGGCTGATACTGCTCACGTGCGCTGCAGGAAAAGCAATCAGTCACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CCA 90 bp TCTTGTTTGGAGGAGGTTCTTTATATATCACGACTGCCTTTAGATGTGGCAACTAGCTCCAGAATTGCGTaGCATCTGCCTCGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: SCLEEVLYISRLPLDVATSSRIA*HLPRAS
Trigger: GGAAGCCCGAGGCAGATGCCACGCAATTCTGGAGCT...AGTTGCCACATCTAAAGGCAGTCGTGATATATAAAGAACCTCCTCCAAACAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
CDS-3UTR CCA 90 bp CATGATGACATTGGCGCAGCAGTCATAAGCGATGTACTGGCAGGCCTCTGGGGAGTTTTCAATTTTTCTTaGGTGGTCCTCACAATCATG +
Preference number: 4 (lower is better)
Translates to: HDDIGAAVISDVLAGLWGVFNFS*VVLTIM
Trigger: CATGATTGTGAGGACCACCCAAGAAAAATTGAAAAC...TCCCCAGAGGCCTGCCAGTACATCGCTTATGACTGCTGCGCCAATGTCATCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
CDS-3UTR CCA 90 bp ACTGAATTAAAACTACCCACACGTGAAGCTTCTTGGAATTGTCAGCTATTGTTGCCACAGCGCCTCCTCTaGAGCATCCCACTGGGCATT +
Preference number: 4 (lower is better)
Translates to: TELKLPTREASWNCQLLLPQRLL*SIPLGI
Trigger: AATGCCCAGTGGGATGCTCCAGAGGAGGCGCTGTGG...CAACAATAGCTGACAATTCCAAGAAGCTTCACGTGTGGGTAGTTTTAATTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CCA 90 bp ACATTGGCCATCTTGTTTGGAGGAGGTTCTTTATATATCACGACTGCCTTTAGAGTACTGGCAGGCCTCTaGGGAGCTGGTGGTGTAGAT +
Preference number: 4 (lower is better)
Translates to: TLAILFGGGSLYITTAFRVLAGL*GAGGVD
Trigger: ATCTACACCACCAGCTCCCCAGAGGCCTGCCAGTAC...TCTAAAGGCAGTCGTGATATATAAAGAACCTCCTCCAAACAAGATGGCCAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
CDS-3UTR CCA 90 bp ACTAAGGCCAAAAATTATCAGCCCTTTCGTTCTGGAAGGAGAGCTGATCTCATTCCTTGGGGTTCCCAGTaGTGCCGGAAGTGTAGACTA +
Preference number: 4 (lower is better)
Translates to: TKAKNYQPFRSGRRADLIPWGSQ*CRKCRL
Trigger: TAGTCTACACTTCCGGCACCACTGGGAACCCCAAGG...AATGAGATCAGCTCTCCTTCCAGAACGAAAGGGCTGATAATTTTTGGCCTTAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp ATTCCAAAACTGAGATGTTTGCTTTCTCTACCTGTTTCCTGTTCAGATGCCTTCGCAAATCCCAGTGCCTaGCGAACCTTGGCTAGCACC +
Preference number: 4 (lower is better)
Translates to: IPKLRCLLSLPVSCSDAFANPSA*RTLAST
Trigger: GGTGCTAGCCAAGGTTCGCCAGGCACTGGGATTTGC...GAAGGCATCTGAACAGGAAACAGGTAGAGAAAGCAAACATCTCAGTTTTGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CCA 90 bp ACTTCATTCCCCAGCTCCATGAATTCCTCCATCGTGTACACATTGGCCATCTTGAGTTCTTTTGACACTTaGCAAATCCCAGTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: TSFPSSMNSSIVYTLAILSSFDT*QIPVPG
Trigger: GCCAGGCACTGGGATTTGCCAAGTGTCAAAAGAACT...CAAGATGGCCAATGTGTACACGATGGAGGAATTCATGGAGCTGGGGAATGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559707.5
ENST00000560124.5
CDS-3UTR CCA 90 bp ACTGAATTAAAACTACCCACACGTGAAGCTTCTTGGAATTGTCAGCTATTGTTGTCACGGCCTCCTCGATaGGCACAGGGGGCACATTCT +
Preference number: 4 (lower is better)
Translates to: TELKLPTREASWNCQLLLSRPPR*AQGAHS
Trigger: AGAATGTGCCCCCTGTGCCCATCGAGGAGGCCGTGA...CAACAATAGCTGACAATTCCAAGAAGCTTCACGTGTGGGTAGTTTTAATTCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp AGAGAGGTGCCTGAATTACATAGTGGGCCCTTTTATTGTGTAGGATGGAAAGATCTGCTGCCCACCCTCTaGCAGAACTCCATAGCTTGT +
Preference number: 4 (lower is better)
Translates to: REVPELHSGPFYCVGWKDLLPTL*QNSIAC
Trigger: ACAAGCTATGGAGTTCTGCCAGAGGGTGGGCAGCAG...ATCTTTCCATCCTACACAATAAAAGGGCCCACTATGTAATTCAGGCACCTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CCA 90 bp ATTCCAAAACTGAGATGTTTGCTTTCTCTACCTGTTTCCTGTTCAGATGCCTTCCCCTCTTCGATGGCCTaGTACACGGCCTCATCCTTC +
Preference number: 4 (lower is better)
Translates to: IPKLRCLLSLPVSCSDAFPSSMA*YTASSF
Trigger: GAAGGATGAGGCCGTGTACCAGGCCATCGAAGAGGG...GAAGGCATCTGAACAGGAAACAGGTAGAGAAAGCAAACATCTCAGTTTTGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CCA 90 bp CTACCTGGAACTAAGGCCAAAAATTATCAGCCCTTTCGTTCTGGAAGGAGAGCTAGTCTCTCTCGAGAATaGCCCACTTCTGGATGTGGT +
Preference number: 4 (lower is better)
Translates to: LPGTKAKNYQPFRSGRRASLSRE*PTSGCG
Trigger: ACCACATCCAGAAGTGGGCCATTCTCGAGAGAGACT...AGCTCTCCTTCCAGAACGAAAGGGCTGATAATTTTTGGCCTTAGTTCCAGGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp AACTACCCACACGTGAAGCTTCTTGGAATTGTCAGCTATTGTTGGCGTAAGACCTATTCAGAATGGAAGTaGGGTGGTCTGGTGGCGACA +
Preference number: 4 (lower is better)
Translates to: NYPHVKLLGIVSYCWRKTYSEWK*GGLVAT
Trigger: TGTCGCCACCAGACCACCCCACTTCCATTCTGAATA...GGTCTTACGCCAACAATAGCTGACAATTCCAAGAAGCTTCACGTGTGGGTAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CCA 90 bp AACTACCCACACGTGAAGCTTCTTGGAATTGTCAGCTATTGTTGGCGTAAGACCTTCCCGTATTCAGAATaGAAGTGGGGTGGTCTGGTG +
Preference number: 4 (lower is better)
Translates to: NYPHVKLLGIVSYCWRKTFPYSE*KWGGLV
Trigger: CACCAGACCACCCCACTTCCATTCTGAATACGGGAA...GGTCTTACGCCAACAATAGCTGACAATTCCAAGAAGCTTCACGTGTGGGTAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CCA 90 bp GTAGATGCCAGTGACGATGCCACCTGCAAATACTGTGCCCACTGCCGAGAAGAAGCAAGACTCCATCTCTaGTTTTCAATTTTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: VDASDDATCKYCAHCREEARLHL*FSIFLG
Trigger: CCCAAGAAAAATTGAAAACCAGAGATGGAGTCTTGC...TTCTTCTCGGCAGTGGGCACAGTATTTGCAGGTGGCATCGTCACTGGCATCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557935.1
CDS-3UTR TCA 90 bp ATTCCAAAACTGAGATGTTTGCTTTCTCTACCTGTTTCCTGTTCAGATGCCTTCCACCTTCTCTGGCACTaGGAGCTCGAGAGCATGGTT +
Preference number: 4 (lower is better)
Translates to: IPKLRCLLSLPVSCSDAFHLLWH*ELESMV
Trigger: AACCATGCTCTCGAGCTCTCAGTGCCAGAGAAGGTG...GAAGGCATCTGAACAGGAAACAGGTAGAGAAAGCAAACATCTCAGTTTTGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR TCA 90 bp CAGCTTTTTAATCTACCTGGAACTAAGGCCAAAAATTATCAGCCCTTTCGTTCTGGGCACCAACTTGCCTaGGCTGTACAGCCGGTAGTT +
Preference number: 4 (lower is better)
Translates to: QLFNLPGTKAKNYQPFRSGHQLA*AVQPVV
Trigger: AACTACCGGCTGTACAGCTCAGGCAAGTTGGTGCCC...AGAACGAAAGGGCTGATAATTTTTGGCCTTAGTTCCAGGTAGATTAAAAAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR TCA 90 bp CACTTCATTCCCCAGCTCCATGAATTCCTCCATCGTGTACACATTGGCCATCTTACTTCTCCAAAACTGTaGGCCGTTTCAGTTTCATCG +
Preference number: 4 (lower is better)
Translates to: HFIPQLHEFLHRVHIGHLTSPKL*AVSVSS
Trigger: CGATGAAACTGAAACGGCTCACAGTTTTGGAGAAGT...AAGATGGCCAATGTGTACACGATGGAGGAATTCATGGAGCTGGGGAATGAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560124.5
CDS-3UTR TCA 90 bp TACCTGGAACTAAGGCCAAAAATTATCAGCCCTTTCGTTCTGGAAGGAGAGCTGAGTCAGGTCGCTAGGTaGGTTGTGACTGATTGCTTT +
Preference number: 4 (lower is better)
Translates to: YLELRPKIISPFVLEGELSQVAR*VVTDCF
Trigger: AAAGCAATCAGTCACAACTCACCTAGCGACCTGACT...CAGCTCTCCTTCCAGAACGAAAGGGCTGATAATTTTTGGCCTTAGTTCCAGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR TCA 90 bp CAAACAGGCAGCAGCAGTTTTATTAAGCATCAAGTCAGTTGGCATGTGGGTGGCCCTTTTCTCAGAGCTTaGCAAAAGATTTGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: QTGSSSFIKHQVSWHVGGPFLRA*QKIWEA
Trigger: TGCCTCCCAAATCTTTTGTCAAGCTCTGAGAAAAGG...GCCACCCACATGCCAACTGACTTGATGCTTAATAAAACTGCTGCTGCCTGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CCA 90 bp AGCGATGAGGTCCCCATACTTATCCAGGGCCTCGTAGAACATCCGATGCACAGTGTTTTCAATTTTTCTTaGGTGGTCCTCACAATCATG +
Preference number: 4 (lower is better)
Translates to: SDEVPILIQGLVEHPMHSVFNFS*VVLTIM
Trigger: CATGATTGTGAGGACCACCCAAGAAAAATTGAAAAC...ACTGTGCATCGGATGTTCTACGAGGCCCTGGATAAGTATGGGGACCTCATCGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000557935.1
CDS-3UTR CCA 90 bp TACCTGGAACTAAGGCCAAAAATTATCAGCCCTTTCGTTCTGGAAGGAGAGCTGTCTGGAGCATCCCACTaGGCATTATTCACCTTCTCT +
Preference number: 4 (lower is better)
Translates to: YLELRPKIISPFVLEGELSGASH*ALFTFS
Trigger: AGAGAAGGTGAATAATGCCCAGTGGGATGCTCCAGA...CAGCTCTCCTTCCAGAACGAAAGGGCTGATAATTTTTGGCCTTAGTTCCAGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CCA 90 bp ATCTTGTTTGGAGGAGGTTCTTTATATATCACGACTGCCTTTAGATGTGGCAACTGTTCCCACTTGTCCTaGCGCTTGAAGCCCAAAGCG +
Preference number: 4 (lower is better)
Translates to: ILFGGGSLYITTAFRCGNCSHLS*RLKPKA
Trigger: CGCTTTGGGCTTCAAGCGCCAGGACAAGTGGGAACA...GTTGCCACATCTAAAGGCAGTCGTGATATATAAAGAACCTCCTCCAAACAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
CDS-3UTR CCA 90 bp AGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTATAGAAATTGGCCATCTTGTTTaGAGGAGGTTCTTTATATAT +
Preference number: 4 (lower is better)
Translates to: RDLGLRKRLGTPALYSIEIGHLV*RRFFIY
Trigger: ATATATAAAGAACCTCCTCCAAACAAGATGGCCAAT...TTCTATAGAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp ATTCCAAAACTGAGATGTTTGCTTTCTCTACCTGTTTCCTGTTCAGATGCCTTCACTAGCACACAGCACTaGTTGGGCTGCTGGGTGTCA +
Preference number: 4 (lower is better)
Translates to: IPKLRCLLSLPVSCSDAFTSTQH*LGCWVS
Trigger: TGACACCCAGCAGCCCAACCAGTGCTGTGTGCTAGT...GAAGGCATCTGAACAGGAAACAGGTAGAGAAAGCAAACATCTCAGTTTTGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CCA 90 bp CAGCTTTTTAATCTACCTGGAACTAAGGCCAAAAATTATCAGCCCTTTCGTTCTGCAAATCCCAGTGCCTaGCGAACCTTGGCTAGCACC +
Preference number: 4 (lower is better)
Translates to: QLFNLPGTKAKNYQPFRSANPSA*RTLAST
Trigger: GGTGCTAGCCAAGGTTCGCCAGGCACTGGGATTTGC...AGAACGAAAGGGCTGATAATTTTTGGCCTTAGTTCCAGGTAGATTAAAAAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp CTACCTGGAACTAAGGCCAAAAATTATCAGCCCTTTCGTTCTGGAAGGAGAGCTACTCTCCACCCGAAATaGAGAAGTCTCTCTCGAGAA +
Preference number: 4 (lower is better)
Translates to: LPGTKAKNYQPFRSGRRATLHPK*RSLSRE
Trigger: TTCTCGAGAGAGACTTCTCCATTTCGGGTGGAGAGT...AGCTCTCCTTCCAGAACGAAAGGGCTGATAATTTTTGGCCTTAGTTCCAGGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp AGAGAGGTGCCTGAATTACATAGTGGGCCCTTTTATTGTGTAGGATGGAAAGATTGCTGTGCCCTGACCTaGAGATCTAACAGACTTGGC +
Preference number: 4 (lower is better)
Translates to: REVPELHSGPFYCVGWKDCCALT*RSNRLG
Trigger: GCCAAGTCTGTTAGATCTCCAGGTCAGGGCACAGCA...ATCTTTCCATCCTACACAATAAAAGGGCCCACTATGTAATTCAGGCACCTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CCA 90 bp AACTACCCACACGTGAAGCTTCTTGGAATTGTCAGCTATTGTTGGCGTAAGACCTGCCTTCGGTCATTTTaGCTCAGCTTGCTACTGAGA +
Preference number: 4 (lower is better)
Translates to: NYPHVKLLGIVSYCWRKTCLRSF*LSLLLR
Trigger: TCTCAGTAGCAAGCTGAGCCAAAATGACCGAAGGCA...GGTCTTACGCCAACAATAGCTGACAATTCCAAGAAGCTTCACGTGTGGGTAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258873.9
3UTR CAA 72 bp TTCCTGTTCAGATGCCTTCGGTCATTTTGGCTCAGCTaGCTACTGAGAATGGCTGCTTCCCGTATTCAGAAT +
Preference number: 4 (lower is better)
Translates to: FLFRCLRSFWLS*LLRMAASRIQN
Trigger: ATTCTGAATACGGGAAGCAGCCATTCTCAGTAGCAAGCTGAGCCAAAATGACCGAAGGCATCTGAACAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR TCA 90 bp CAGCTTTTTAATCTACCTGGAACTAAGGCCAAAAATTATCAGCCCTTTCGTTCTAGCTCAGTCACCCACTaGGAGAGGCTAGCCTTGAGT +
Preference number: 4 (lower is better)
Translates to: QLFNLPGTKAKNYQPFRSSSVTH*ERLALS
Trigger: ACTCAAGGCTAGCCTCTCTCAGTGGGTGACTGAGCT...AGAACGAAAGGGCTGATAATTTTTGGCCTTAGTTCCAGGTAGATTAAAAAGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR TCA 90 bp TACCTGGAACTAAGGCCAAAAATTATCAGCCCTTTCGTTCTGGAAGGAGAGCTGACTTCTCCAAAACTGTaGGCCGTTTCAGTTTCATCG +
Preference number: 4 (lower is better)
Translates to: YLELRPKIISPFVLEGELTSPKL*AVSVSS
Trigger: CGATGAAACTGAAACGGCTCACAGTTTTGGAGAAGT...CAGCTCTCCTTCCAGAACGAAAGGGCTGATAATTTTTGGCCTTAGTTCCAGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR TCA 90 bp ACTGAATTAAAACTACCCACACGTGAAGCTTCTTGGAATTGTCAGCTATTGTTGTTCCTGCAGCGCACGTaGGCAGTATCAGCCATCTCT +
Preference number: 4 (lower is better)
Translates to: TELKLPTREASWNCQLLLFLQRT*AVSAIS
Trigger: AGAGATGGCTGATACTGCTCACGTGCGCTGCAGGAA...CAACAATAGCTGACAATTCCAAGAAGCTTCACGTGTGGGTAGTTTTAATTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR TCA 90 bp CTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTATAGAAACTGCAGGCATATTAGGGTCTATTGTGTaGACAAAGGGAAAATTTTGG +
Preference number: 4 (lower is better)
Translates to: LRKRLGTPALYSIETAGILGSIV*TKGKFW
Trigger: CCAAAATTTTCCCTTTGTTCACACAATAGACCCTAA...TATGCCTGCAGTTTCTATAGAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR GCA 90 bp GGTTCTTTATATATCACGACTGCCTTTAGATGTGGCAACTGTTTCCAGATCTTCAAATACTGTGCCCACTaGCGAGAAGAACCACTCCGG +
Preference number: 4 (lower is better)
Translates to: GSLYITTAFRCGNCFQIFKYCAH*REEPLR
Trigger: CCGGAGTGGTTCTTCTCGGCAGTGGGCACAGTATTT...GAAGATCTGGAAACAGTTGCCACATCTAAAGGCAGTCGTGATATATAAAGAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
CDS-3UTR GCA 90 bp ACATTGGCCATCTTGTTTGGAGGAGGTTCTTTATATATCACGACTGCCTTTAGACACCTGCAAATACTGTaGCCACTGCCGAGAAGAACC +
Preference number: 4 (lower is better)
Translates to: TLAILFGGGSLYITTAFRHLQIL*PLPRRT
Trigger: GGTTCTTCTCGGCAGTGGGCACAGTATTTGCAGGTG...TCTAAAGGCAGTCGTGATATATAAAGAACCTCCTCCAAACAAGATGGCCAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
CDS-3UTR GCA 90 bp ACTGAATTAAAACTACCCACACGTGAAGCTTCTTGGAATTGTCAGCTATTGTTGATGCCCACTACTCTCTaGACTGGTCCCACCTGCTCA +
Preference number: 4 (lower is better)
Translates to: TELKLPTREASWNCQLLLMPTTL*TGPTCS
Trigger: TGAGCAGGTGGGACCAGTGCAGAGAGTAGTGGGCAT...CAACAATAGCTGACAATTCCAAGAAGCTTCACGTGTGGGTAGTTTTAATTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CCA 90 bp CAGCTGCTTCTGCGTGTCGACCATGATGACATTGGCGCAGCAGTCATAAGCGATATTGGCCATCTTGTTTaGAGGAGGTTCTTTATATAT +
Preference number: 4 (lower is better)
Translates to: QLLLRVDHDDIGAAVISDIGHLV*RRFFIY
Trigger: ATATATAAAGAACCTCCTCCAAACAAGATGGCCAAT...ATCGCTTATGACTGCTGCGCCAATGTCATCATGGTCGACACGCAGAAGCAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
CDS-3UTR CCA 90 bp ACTGAATTAAAACTACCCACACGTGAAGCTTCTTGGAATTGTCAGCTATTGTTGACTAGCACACAGCACTaGTTGGGCTGCTGGGTGTCA +
Preference number: 4 (lower is better)
Translates to: TELKLPTREASWNCQLLLTSTQH*LGCWVS
Trigger: TGACACCCAGCAGCCCAACCAGTGCTGTGTGCTAGT...CAACAATAGCTGACAATTCCAAGAAGCTTCACGTGTGGGTAGTTTTAATTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp ACTGAATTAAAACTACCCACACGTGAAGCTTCTTGGAATTGTCAGCTATTGTTGGTGCCTGGCGAACCTTaGCTAGCACCAGGTAATCTG +
Preference number: 4 (lower is better)
Translates to: TELKLPTREASWNCQLLLVPGEP*LAPGNL
Trigger: CAGATTACCTGGTGCTAGCCAAGGTTCGCCAGGCAC...CAACAATAGCTGACAATTCCAAGAAGCTTCACGTGTGGGTAGTTTTAATTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp ACTGAATTAAAACTACCCACACGTGAAGCTTCTTGGAATTGTCAGCTATTGTTGCTGCTGCCCACCCTCTaGCAGAACTCCATAGCTTGT +
Preference number: 4 (lower is better)
Translates to: TELKLPTREASWNCQLLLLLPTL*QNSIAC
Trigger: ACAAGCTATGGAGTTCTGCCAGAGGGTGGGCAGCAG...CAACAATAGCTGACAATTCCAAGAAGCTTCACGTGTGGGTAGTTTTAATTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp AAAATTATGCCATGCTGGGGCTTGAGCTTGAGCTTGGGCTTAGGCTTGGGCTCAGATACAAAAATTAGTTaGGTATGGTGGCATGCACTT +
Preference number: 4 (lower is better)
Translates to: KIMPCWGLSLSLGLGLGSDTKIS*VWWHAL
Trigger: AAGTGCATGCCACCATACCCAACTAATTTTTGTATC...TGAGCCCAAGCCTAAGCCCAAGCTCAAGCTCAAGCCCCAGCATGGCATAATTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR GCA 90 bp GGTTCTTTATATATCACGACTGCCTTTAGATGTGGCAACTGTTTCCAGATCTTCAGACCCAGGAAGAAGTaGTGTGTCTCTGCCATCATG +
Preference number: 4 (lower is better)
Translates to: GSLYITTAFRCGNCFQIFRPRKK*CVSAIM
Trigger: CATGATGGCAGAGACACAGCACTTCTTCCTGGGTCT...GAAGATCTGGAAACAGTTGCCACATCTAAAGGCAGTCGTGATATATAAAGAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559707.5
CDS-3UTR CCA 90 bp GTATTTGTGTCCCAGCCTCCAAAAATAGATCAGATACAAAAATTAGTTGGGTATATGCCCTCTGCGTCCTaGTTCACCAGCTTCACCCGA +
Preference number: 4 (lower is better)
Translates to: VFVSQPPKIDQIQKLVGYMPSAS*FTSFTR
Trigger: TCGGGTGAAGCTGGTGAACCAGGACGCAGAGGGCAT...ATACCCAACTAATTTTTGTATCTGATCTATTTTTGGAGGCTGGGACACAAATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CCA 90 bp ACTGAATTAAAACTACCCACACGTGAAGCTTCTTGGAATTGTCAGCTATTGTTGAGCCTTCCTCGTCGATaGCCTCACAAGTCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: TELKLPTREASWNCQLLLSLPRR*PHKSCP
Trigger: AGGACAAGACTTGTGAGGCCATCGACGAGGAAGGCT...CAACAATAGCTGACAATTCCAAGAAGCTTCACGTGTGGGTAGTTTTAATTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp CAAACAGGCAGCAGCAGTTTTATTAAGCATCAAGTCAGTTGGCATGTGGGTGGCACACGTGAAGCTTCTTaGAATTGTCAGCTATTGTTG +
Preference number: 4 (lower is better)
Translates to: QTGSSSFIKHQVSWHVGGTREAS*NCQLLL
Trigger: CAACAATAGCTGACAATTCCAAGAAGCTTCACGTGT...GCCACCCACATGCCAACTGACTTGATGCTTAATAAAACTGCTGCTGCCTGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258873.9
ENST00000560124.5
CDS-3UTR CCA 90 bp CTCAGGCACTTCATTCCCCAGCTCCATGAATTCCTCCATCGTGTACACATTGGCAACTGTTTCCAGATCTaGTTTTCAATTTTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: LRHFIPQLHEFLHRVHIGNCFQI*FSIFLG
Trigger: CCCAAGAAAAATTGAAAACCAGATCTGGAAACAGTT...GCCAATGTGTACACGATGGAGGAATTCATGGAGCTGGGGAATGAAGTGCCTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000560124.5
CDS-3UTR TCA 90 bp ACTGAATTAAAACTACCCACACGTGAAGCTTCTTGGAATTGTCAGCTATTGTTGCATCCTTCTTCTCTATaGTCTCGGACACTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: TELKLPTREASWNCQLLLHPSSL*SRTLWW
Trigger: CCACCACAGTGTCCGAGATCATAGAGAAGAAGGATG...CAACAATAGCTGACAATTCCAAGAAGCTTCACGTGTGGGTAGTTTTAATTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR TCA 90 bp AGAGAGGTGCCTGAATTACATAGTGGGCCCTTTTATTGTGTAGGATGGAAAGATTTCTGGAAGGAGAGCTaGTCTCATTTGTCACCTGAA +
Preference number: 4 (lower is better)
Translates to: REVPELHSGPFYCVGWKDFWKES*SHLSPE
Trigger: TTCAGGTGACAAATGAGATCAGCTCTCCTTCCAGAA...ATCTTTCCATCCTACACAATAAAAGGGCCCACTATGTAATTCAGGCACCTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR TCA 90 bp ATTCCAAAACTGAGATGTTTGCTTTCTCTACCTGTTTCCTGTTCAGATGCCTTCTCGCTAGGTGAGTTGTaGCTGATTGCTTTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: IPKLRCLLSLPVSCSDAFSLGEL*LIAFPA
Trigger: TGCAGGAAAAGCAATCAGTCACAACTCACCTAGCGA...GAAGGCATCTGAACAGGAAACAGGTAGAGAAAGCAAACATCTCAGTTTTGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR GCA 90 bp ACTGAATTAAAACTACCCACACGTGAAGCTTCTTGGAATTGTCAGCTATTGTTGAGGATCTTTTCCAGCTaGTTCTGCGTGTCGACCATG +
Preference number: 4 (lower is better)
Translates to: TELKLPTREASWNCQLLLRIFSS*FCVSTM
Trigger: CATGGTCGACACGCAGAAGCAGCTGGAAAAGATCCT...CAACAATAGCTGACAATTCCAAGAAGCTTCACGTGTGGGTAGTTTTAATTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CCA 90 bp CAAACAGGCAGCAGCAGTTTTATTAAGCATCAAGTCAGTTGGCATGTGGGTGGCGTTTTCAATTTTTCTTaGGTGGTCCTCACAATCATG +
Preference number: 4 (lower is better)
Translates to: QTGSSSFIKHQVSWHVGGVFNFS*VVLTIM
Trigger: CATGATTGTGAGGACCACCCAAGAAAAATTGAAAAC...GCCACCCACATGCCAACTGACTTGATGCTTAATAAAACTGCTGCTGCCTGTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258873.9
ENST00000560124.5
CDS-3UTR CCA 90 bp GTATTTGTGTCCCAGCCTCCAAAAATAGATCAGATACAAAAATTAGTTGGGTATGACAGGAACTTCCTCTaGTCCCCAATGAGCATGGCG +
Preference number: 4 (lower is better)
Translates to: VFVSQPPKIDQIQKLVGYDRNFL*SPMSMA
Trigger: CGCCATGCTCATTGGGGACCAGAGGAAGTTCCTGTC...ATACCCAACTAATTTTTGTATCTGATCTATTTTTGGAGGCTGGGACACAAATAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CCA 90 bp CAGCTTTTTAATCTACCTGGAACTAAGGCCAAAAATTATCAGCCCTTTCGTTCTGTCAGATTATCAGTCTaGTCAGAGGTGTCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: QLFNLPGTKAKNYQPFRSVRLSV*SEVSGS
Trigger: GGACCCAGACACCTCTGACCAGACTGATAATCTGAC...AGAACGAAAGGGCTGATAATTTTTGGCCTTAGTTCCAGGTAGATTAAAAAGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp GCTAGCAGCTTTTTAATCTACCTGGAACTAAGGCCAAAAATTATCAGCCCTTTCACTCTCCACCCGAAATaGAGAAGTCTCTCTCGAGAA +
Preference number: 4 (lower is better)
Translates to: ASSFLIYLELRPKIISPFTLHPK*RSLSRE
Trigger: TTCTCGAGAGAGACTTCTCCATTTCGGGTGGAGAGT...GAAAGGGCTGATAATTTTTGGCCTTAGTTCCAGGTAGATTAAAAAGCTGCTAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp CTACCTGGAACTAAGGCCAAAAATTATCAGCCCTTTCGTTCTGGAAGGAGAGCTATTAGTTGGGTATGGTaGCATGCACTTGTAATTCCA +
Preference number: 4 (lower is better)
Translates to: LPGTKAKNYQPFRSGRRAISWVW*HALVIP
Trigger: TGGAATTACAAGTGCATGCCACCATACCCAACTAAT...AGCTCTCCTTCCAGAACGAAAGGGCTGATAATTTTTGGCCTTAGTTCCAGGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR GCA 90 bp CAGCTTTTTAATCTACCTGGAACTAAGGCCAAAAATTATCAGCCCTTTCGTTCTACTGATTGCTTTTCCTaGAGCGCACGTGAGCAGTAT +
Preference number: 4 (lower is better)
Translates to: QLFNLPGTKAKNYQPFRSTDCFS*SAREQY
Trigger: ATACTGCTCACGTGCGCTGCAGGAAAAGCAATCAGT...AGAACGAAAGGGCTGATAATTTTTGGCCTTAGTTCCAGGTAGATTAAAAAGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR GCA 90 bp ACTGAATTAAAACTACCCACACGTGAAGCTTCTTGGAATTGTCAGCTATTGTTGCACAAAATTATGCCATaGTGGGGCTTGAGCTTGAGC +
Preference number: 4 (lower is better)
Translates to: TELKLPTREASWNCQLLLHKIMP*WGLSLS
Trigger: GCTCAAGCTCAAGCCCCAGCATGGCATAATTTTGTG...CAACAATAGCTGACAATTCCAAGAAGCTTCACGTGTGGGTAGTTTTAATTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR GCA 90 bp CAAACAGGCAGCAGCAGTTTTATTAAGCATCAAGTCAGTTGGCATGTGGGTGGCATGTATGCATTGGTTTaGTTGTTTCTTGACAGTACA +
Preference number: 4 (lower is better)
Translates to: QTGSSSFIKHQVSWHVGGMYALV*LFLDST
Trigger: TGTACTGTCAAGAAACAAGCAAACCAATGCATACAT...GCCACCCACATGCCAACTGACTTGATGCTTAATAAAACTGCTGCTGCCTGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CCA 90 bp ATTCCAAAACTGAGATGTTTGCTTTCTCTACCTGTTTCCTGTTCAGATGCCTTCTGCAAAAGATGCAGGTaGATGTCCCTAGGTCTGTTT +
Preference number: 4 (lower is better)
Translates to: IPKLRCLLSLPVSCSDAFCKRCR*MSLGLF
Trigger: AAACAGACCTAGGGACATCCACCTGCATCTTTTGCA...GAAGGCATCTGAACAGGAAACAGGTAGAGAAAGCAAACATCTCAGTTTTGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CCA 90 bp AGAGAGGTGCCTGAATTACATAGTGGGCCCTTTTATTGTGTAGGATGGAAAGATATCAGTCACTCTAAATaGACACCACATGAACCTCTG +
Preference number: 4 (lower is better)
Translates to: REVPELHSGPFYCVGWKDISHSK*TPHEPL
Trigger: CAGAGGTTCATGTGGTGTCCATTTAGAGTGACTGAT...ATCTTTCCATCCTACACAATAAAAGGGCCCACTATGTAATTCAGGCACCTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR TCA 90 bp AGAGAGGTGCCTGAATTACATAGTGGGCCCTTTTATTGTGTAGGATGGAAAGATTTCATTTTCTCAAACTaGGACTCTGCACCCGTTAAA +
Preference number: 4 (lower is better)
Translates to: REVPELHSGPFYCVGWKDFIFSN*DSAPVK
Trigger: TTTAACGGGTGCAGAGTCTCAGTTTGAGAAAATGAA...ATCTTTCCATCCTACACAATAAAAGGGCCCACTATGTAATTCAGGCACCTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR GCA 90 bp CAGCTTTTTAATCTACCTGGAACTAAGGCCAAAAATTATCAGCCCTTTCGTTCTCTCTCCCTTCTCCTCTaGTGCAGCATGATTTTCTTA +
Preference number: 4 (lower is better)
Translates to: QLFNLPGTKAKNYQPFRSLSLLL*CSMIFL
Trigger: TAAGAAAATCATGCTGCAGCAGAGGAGAAGGGAGAG...AGAACGAAAGGGCTGATAATTTTTGGCCTTAGTTCCAGGTAGATTAAAAAGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CCA 90 bp AACTACCCACACGTGAAGCTTCTTGGAATTGTCAGCTATTGTTGGCGTAAGACCTACGTATGTATGCATTaGTTTGCTTGTTTCTTGACA +
Preference number: 4 (lower is better)
Translates to: NYPHVKLLGIVSYCWRKTYVCMH*FACFLT
Trigger: TGTCAAGAAACAAGCAAACCAATGCATACATACGTA...GGTCTTACGCCAACAATAGCTGACAATTCCAAGAAGCTTCACGTGTGGGTAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CCA 90 bp ATTCCAAAACTGAGATGTTTGCTTTCTCTACCTGTTTCCTGTTCAGATGCCTTCCATGACCAACTAATCTaGGTTAGGGTCTATTGTGTG +
Preference number: 4 (lower is better)
Translates to: IPKLRCLLSLPVSCSDAFHDQLI*VRVYCV
Trigger: CACACAATAGACCCTAACCCAGATTAGTTGGTCATG...GAAGGCATCTGAACAGGAAACAGGTAGAGAAAGCAAACATCTCAGTTTTGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR GCA 90 bp AATTTTGGTAAAGCTCCCTGCCTCCCTTTGCATCAAGAGCACCTTATTCTTTGCATACCTACGTATGTATaGATTGGTTTGCTTGTTTCT +
Preference number: 4 (lower is better)
Translates to: NFGKAPCLPLHQEHLILCIPTYV*IGLLVS
Trigger: AGAAACAAGCAAACCAATGCATACATACGTAGGTAT...GCAAAGAATAAGGTGCTCTTGATGCAAAGGGAGGCAGGGAGCTTTACCAAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CCA 90 bp ACATTGGCCATCTTGTTTGGAGGAGGTTCTTTATATATCACGACTGCCTTTAGATCAATTTTTCTTGGGTaGTCCTCACAATCATGTCCT +
Preference number: 4 (lower is better)
Translates to: TLAILFGGGSLYITTAFRSIFLG*SSQSCP
Trigger: AGGACATGATTGTGAGGACCACCCAAGAAAAATTGA...TCTAAAGGCAGTCGTGATATATAAAGAACCTCCTCCAAACAAGATGGCCAATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
CDS-3UTR TCA 90 bp GCTAGCAGCTTTTTAATCTACCTGGAACTAAGGCCAAAAATTATCAGCCCTTTCACAGTATTTGTCCTTTaGGTCTGGCTTATTTCACTT +
Preference number: 4 (lower is better)
Translates to: ASSFLIYLELRPKIISPFTVFVL*VWLISL
Trigger: AAGTGAAATAAGCCAGACTCAAAGGACAAATACTGT...GAAAGGGCTGATAATTTTTGGCCTTAGTTCCAGGTAGATTAAAAAGCTGCTAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR GCA 90 bp GTATTTGTGTCCCAGCCTCCAAAAATAGATCAGATACAAAAATTAGTTGGGTATTGTTTCCTGTTCAGATaGCTTCGGTCATTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: VFVSQPPKIDQIQKLVGYCFLFR*LRSFWL
Trigger: GAGCCAAAATGACCGAAGGCATCTGAACAGGAAACA...ATACCCAACTAATTTTTGTATCTGATCTATTTTTGGAGGCTGGGACACAAATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR GCA 90 bp ACTGAATTAAAACTACCCACACGTGAAGCTTCTTGGAATTGTCAGCTATTGTTGATATTGGGGTCTGTATaGAGGAAAGAAAGGATAAGC +
Preference number: 4 (lower is better)
Translates to: TELKLPTREASWNCQLLLILGSV*RKERIS
Trigger: GCTTATCCTTTCTTTCCTGCATACAGACCCCAATAT...CAACAATAGCTGACAATTCCAAGAAGCTTCACGTGTGGGTAGTTTTAATTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CCA 90 bp CTCAGACTTCACAGAGGAAATCTGTCGCCGAGTAAAAGATTTAGATTAACACTTTGTCAGTCAGTGAGCTaGTTTTCAATTTTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: LRLHRGNLSPSKRFRLTLCQSVS*FSIFLG
Trigger: CCCAAGAAAAATTGAAAACCAGCTCACTGACTGACA...AAGTGTTAATCTAAATCTTTTACTCGGCGACAGATTTCCTCTGTGAAGTCTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CCA 90 bp CAGCTTTTTAATCTACCTGGAACTAAGGCCAAAAATTATCAGCCCTTTCGTTCTATTGGCCATCTTGTTTaGAGGAGGTTCTTTATATAT +
Preference number: 4 (lower is better)
Translates to: QLFNLPGTKAKNYQPFRSIGHLV*RRFFIY
Trigger: ATATATAAAGAACCTCCTCCAAACAAGATGGCCAAT...AGAACGAAAGGGCTGATAATTTTTGGCCTTAGTTCCAGGTAGATTAAAAAGCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CCA 90 bp GTATTTGTGTCCCAGCCTCCAAAAATAGATCAGATACAAAAATTAGTTGGGTATAACAGATCAGTTGTATaGGAGGCTTTCTTTCCTAAA +
Preference number: 4 (lower is better)
Translates to: VFVSQPPKIDQIQKLVGYNRSVV*EAFFPK
Trigger: TTTAGGAAAGAAAGCCTCCCATACAACTGATCTGTT...ATACCCAACTAATTTTTGTATCTGATCTATTTTTGGAGGCTGGGACACAAATAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CAA 90 bp TCCCATACCCGGGGCACCCCCATGTGTGATGTGGGCTCCACCTCCCGCAGCGTGCAGCCGGGCACCAACTaGCCTGAGCTGTACAGCCGG +
Preference number: 5 (lower is better)
Translates to: SHTRGTPMCDVGSTSRSVQPGTN*PELYSR
Trigger: CCGGCTGTACAGCTCAGGCAAGTTGGTGCCCGGCTG...CACGCTGCGGGAGGTGGAGCCCACATCACACATGGGGGTGCCCCGGGTATGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560124.5
CDS-3UTR CAA 90 bp TGTGCCCAGACTGAAGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCCTCAGCATCACGCCCTaGGGGTTCCCAGTGGTGCCG +
Preference number: 5 (lower is better)
Translates to: CAQTEETWGSGRGSERLPLSITP*GFPVVP
Trigger: CGGCACCACTGGGAACCCCAAGGGCGTGATGCTGAG...GGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCTTCAGTCTGGGCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CAA 90 bp TGTGCCCAGACTGAAGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCCAGCCGGGCACCAACTaGCCTGAGCTGTACAGCCGG +
Preference number: 5 (lower is better)
Translates to: CAQTEETWGSGRGSERLPQPGTN*PELYSR
Trigger: CCGGCTGTACAGCTCAGGCAAGTTGGTGCCCGGCTG...GGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCTTCAGTCTGGGCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CAA 90 bp CACTCCGGGGAGTTGAAGCCGAGGATGGCCACACTGTGGGCCTGCTTCAGGCCGGAGATGTGTTCCCACTaGTCCTGGCGCTTGAAGCCC +
Preference number: 5 (lower is better)
Translates to: HSGELKPRMATLWACFRPEMCSH*SWRLKP
Trigger: GGGCTTCAAGCGCCAGGACAAGTGGGAACACATCTC...CGGCCTGAAGCAGGCCCACAGTGTGGCCATCCTCGGCTTCAACTCCCCGGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
CDS GCA 90 bp TGGGAGCCAAGAAGCAGTGGCAGGCCCTCCAAAGCAACTCACACCTaGTTGGGGGCTGGTGGCAGCACCCCGACGACAAATGCTCACCCA +
Preference number: 5 (lower is better)
Translates to: WEPRSSGRPSKATHT*LGAGGSTPTTNAHP
Trigger: TGGGTGAGCATTTGTCGTCGGGGTGCTGCCACCAGCCCCCAAGCAGGTGTGAGTTGCTTTGGAGGGCCTGCCACTGCTTCTTGGCTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560183.1
CDS-3UTR CAA 90 bp TTCTGCCGGCCGGATGTCACCGGCCTGGCTGCCGTACCGTGCCGTCCACGTGATGCATACAAGCGGATGTaGAGACCCAGGAAGAAGTGC +
Preference number: 5 (lower is better)
Translates to: FCRPDVTGLAAVPCRPRDAYKRM*RPRKKC
Trigger: GCACTTCTTCCTGGGTCTCAACATCCGCTTGTATGC...ATCACGTGGACGGCACGGTACGGCAGCCAGGCCGGTGACATCCGGCCGGCAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559707.5
ENST00000560124.5
CDS CCA 90 bp ACCACAACCCAAGCCTCAACCACAACCCGGAAGCCTCAGCACAGCTaGAGATGCCCCCTTTCTGGGAGCCAAGAAGCAGTGGCAGGCCCT +
Preference number: 5 (lower is better)
Translates to: TTTQASTTTRKPQHS*RCPLSGSQEAVAGP
Trigger: AGGGCCTGCCACTGCTTCTTGGCTCCCAGAAAGGGGGCATCTCCAGCTGTGCTGAGGCTTCCGGGTTGTGGTTGAGGCTTGGGTTGTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560183.1
CDS-3UTR CAA 90 bp CGAGAAGAACCACTCCGGGGAGTTGAAGCCGAGGATGGCCACACTGTGGGCCTGTATCCAGCTCCAGAATaGCGTGGCATCTGCCTCGGG +
Preference number: 5 (lower is better)
Translates to: REEPLRGVEAEDGHTVGLYPAPE*RGICLG
Trigger: CCCGAGGCAGATGCCACGCAATTCTGGAGCTGGATA...CAGGCCCACAGTGTGGCCATCCTCGGCTTCAACTCCCCGGAGTGGTTCTTCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
CDS-3UTR CAA 90 bp CACCTCCTGGATGCGCTCCATGATCTTCTCCCATACCCGGGGCACCCCCATGTGGAGATGTGTTCCCACTaGTCCTGGCGCTTGAAGCCC +
Preference number: 5 (lower is better)
Translates to: HLLDALHDLLPYPGHPHVEMCSH*SWRLKP
Trigger: GGGCTTCAAGCGCCAGGACAAGTGGGAACACATCTC...CACATGGGGGTGCCCCGGGTATGGGAGAAGATCATGGAGCGCATCCAGGAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559707.5
CDS TCA 90 bp CAGCCTGCCCTAGGGCTGCTGTTGAGGTGTAGCCCCAGATACCTCTaGCCTATATGGCACGGGACCCAGTTGCCCACCTGTGTGGCTCTT +
Preference number: 5 (lower is better)
Translates to: QPALGLLLRCSPRYL*PIWHGTQLPTCVAL
Trigger: AAGAGCCACACAGGTGGGCAACTGGGTCCCGTGCCATATAGGTCAGAGGTATCTGGGGCTACACCTCAACAGCAGCCCTAGGGCAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559713.1
CDS CCA 90 bp AGCCAAGAAGCAGTGGCAGGCCCTCCAAAGCAACTCACACCTGCTTaGGGGCTGGTGGCAGCACCCCGACGACAAATGCTCACCCAAGTT +
Preference number: 5 (lower is better)
Translates to: SQEAVAGPPKQLTPA*GLVAAPRRQMLTQV
Trigger: AACTTGGGTGAGCATTTGTCGTCGGGGTGCTGCCACCAGCCCCCAAGCAGGTGTGAGTTGCTTTGGAGGGCCTGCCACTGCTTCTTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560183.1
CDS CCA 90 bp AACCACAACCCGGAAGCCTCAGCACAGCTGGAGATGCCCCCTTTCTaGGAGCCAAGAAGCAGTGGCAGGCCCTCCAAAGCAACTCACACC +
Preference number: 5 (lower is better)
Translates to: NHNPEASAQLEMPPF*EPRSSGRPSKATHT
Trigger: GGTGTGAGTTGCTTTGGAGGGCCTGCCACTGCTTCTTGGCTCCCAGAAAGGGGGCATCTCCAGCTGTGCTGAGGCTTCCGGGTTGTGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560183.1
CDS-3UTR CAA 90 bp CGGCCGGATGTCACCGGCCTGGCTGCCGTACCGTGCCGTCCACGTGATATTGTCCCACGTGATATTGTCTaGACTCAGCATCACGCCCTT +
Preference number: 5 (lower is better)
Translates to: RPDVTGLAAVPCRPRDIVPRDIV*TQHHAL
Trigger: AAGGGCGTGATGCTGAGTCAAGACAATATCACGTGG...GACAATATCACGTGGACGGCACGGTACGGCAGCCAGGCCGGTGACATCCGGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559707.5
ENST00000560124.5
CDS-3UTR CAA 90 bp AGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTATAGAACAGCCGGGCACCAACTaGCCTGAGCTGTACAGCCGG +
Preference number: 5 (lower is better)
Translates to: RDLGLRKRLGTPALYSIEQPGTN*PELYSR
Trigger: CCGGCTGTACAGCTCAGGCAAGTTGGTGCCCGGCTG...TTCTATAGAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS GCA 90 bp AACTCACACCTGCTTGGGGGCTGGTGGCAGCACCCCGACGACAAATaGTCACCCAAGTTTCCCTCTCCTCGGCTTGTCATCCACGACTCA +
Preference number: 5 (lower is better)
Translates to: NSHLLGGWWQHPDDK*SPKFPSPRLVIHDS
Trigger: TGAGTCGTGGATGACAAGCCGAGGAGAGGGAAACTTGGGTGAGCATTTGTCGTCGGGGTGCTGCCACCAGCCCCCAAGCAGGTGTGAGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560183.1
CDS-3UTR CAA 90 bp GGCCTCTGGGGAGCTGGTGGTGTAGATGCCAGTGACGATGCCACCTGCAAATACTATCCAGCTCCAGAATaGCGTGGCATCTGCCTCGGG +
Preference number: 5 (lower is better)
Translates to: GLWGAGGVDASDDATCKYYPAPE*RGICLG
Trigger: CCCGAGGCAGATGCCACGCAATTCTGGAGCTGGATA...GTATTTGCAGGTGGCATCGTCACTGGCATCTACACCACCAGCTCCCCAGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
CDS-3UTR CAA 90 bp CTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTATAGAAACTGCAGGCATAAGCTTCAGGAAGCCCTaGGCGGCTCTGCGGGCGAGC +
Preference number: 5 (lower is better)
Translates to: LRKRLGTPALYSIETAGISFRKP*AALRAS
Trigger: GCTCGCCCGCAGAGCCGCCAAGGGCTTCCTGAAGCT...TATGCCTGCAGTTTCTATAGAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CAA 90 bp GCATACAAGCGGATGTTGAGACCCAGGAAGAAGTGCTGTGTCTCTGCCATCATGAGCTTCAGGAAGCCCTaGGCGGCTCTGCGGGCGAGC +
Preference number: 5 (lower is better)
Translates to: AYKRMLRPRKKCCVSAIMSFRKP*AALRAS
Trigger: GCTCGCCCGCAGAGCCGCCAAGGGCTTCCTGAAGCT...CATGATGGCAGAGACACAGCACTTCTTCCTGGGTCTCAACATCCGCTTGTATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559707.5
CDS-3UTR CAA 90 bp ACTCTGCACCCGTTAAACAGTAACTTTCCCTTCCCCCTCCCATCCTCTGACACCCTCAGCATCACGCCCTaGGGGTTCCCAGTGGTGCCG +
Preference number: 5 (lower is better)
Translates to: TLHPLNSNFPFPLPSSDTLSITP*GFPVVP
Trigger: CGGCACCACTGGGAACCCCAAGGGCGTGATGCTGAG...GGTGTCAGAGGATGGGAGGGGGAAGGGAAAGTTACTGTTTAACGGGTGCAGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CAA 90 bp CACCTCCTGCTGGACTTCTGCCGGCCGGATGTCACCGGCCTGGCTGCCGTACCGCATTGGCCATCTTGTTaGGAGGAGGTTCTTTATATA +
Preference number: 5 (lower is better)
Translates to: HLLLDFCRPDVTGLAAVPHWPSC*EEVLYI
Trigger: TATATAAAGAACCTCCTCCAAACAAGATGGCCAATG...CGGTACGGCAGCCAGGCCGGTGACATCCGGCCGGCAGAAGTCCAGCAGGAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559707.5
ENST00000560124.5
CDS-3UTR CAA 90 bp CAGGTGAGGTTCTGCTCCAAGGTCACCGACATGGCCCACAGCAGCATCTTTCGCGGCGAGCAGGTAGTATaGGGAGTAGGAGATGTGTTC +
Preference number: 5 (lower is better)
Translates to: QVRFCSKVTDMAHSSIFRGEQVV*GVGDVF
Trigger: GAACACATCTCCTACTCCCAATACTACCTGCTCGCC...GCGAAAGATGCTGCTGTGGGCCATGTCGGTGACCTTGGAGCAGAACCTCACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559707.5
CDS-3UTR CAA 90 bp AGACTGAAGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCGCATACAAGCGGATGTaGAGACCCAGGAAGAAGTGC +
Preference number: 5 (lower is better)
Translates to: RLKRPGAQEEARNACPLFAYKRM*RPRKKC
Trigger: GCACTTCTTCCTGGGTCTCAACATCCGCTTGTATGC...GAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCTTCAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CAA 90 bp CAGACTGAAGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTGCATACAAGCGGATGTaGAGACCCAGGAAGAAGTGC +
Preference number: 5 (lower is better)
Translates to: QTEETWGSGRGSERLPSIAYKRM*RPRKKC
Trigger: GCACTTCTTCCTGGGTCTCAACATCCGCTTGTATGC...AATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCTTCAGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CAA 90 bp TCCTCAGGCACTTCATTCCCCAGCTCCATGAATTCCTCCATCGTGTACACATTGGCCGCCGCGTTCATGTaGACCCTCCGGATCCCCTCT +
Preference number: 5 (lower is better)
Translates to: SSGTSFPSSMNSSIVYTLAAAFM*TLRIPS
Trigger: AGAGGGGATCCGGAGGGTCAACATGAACGCGGCGGC...CAATGTGTACACGATGGAGGAATTCATGGAGCTGGGGAATGAAGTGCCTGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560124.5
CDS TCA 90 bp CTCCTCTGGAGCATCCCACTGGGCATTATTCACCTTCTCTGGCACTaGGAGCTCGAGAGCATGGTTCAGGGACTCTTTGGAGAGTGGCTG +
Preference number: 5 (lower is better)
Translates to: LLWSIPLGIIHLLWH*ELESMVQGLFGEWL
Trigger: CAGCCACTCTCCAAAGAGTCCCTGAACCATGCTCTCGAGCTCTCAGTGCCAGAGAAGGTGAATAATGCCCAGTGGGATGCTCCAGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258873.9
ENST00000558130.1
ENST00000558828.5
ENST00000559241.5
CDS CCA 90 bp GGATGTGTTCGGAGTTTCTTCCTTCTGGTGGGTTCGTGGTCTCGCTaGCTCAGGAGTGAAGCTGCAGACCTTCACGGTGAGTGTTACAGC +
Preference number: 5 (lower is better)
Translates to: GCVRSFFLLVGSWSR*LRSEAADLHGECYS
Trigger: GCTGTAACACTCACCGTGAAGGTCTGCAGCTTCACTCCTGAGCCAGCGAGACCACGAACCCACCAGAAGGAAGAAACTCCGAACACATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558793.1
ENST00000558828.5
ENST00000560817.5
CDS CCA 90 bp GAGAGTGGCTGCCTGTCAGTCAGTGAGCTATGTGTCCCGAATTGGTaGGTTCTTGGTCTCACTGACTTCAAGACTGACGCCGCAGACCCT +
Preference number: 5 (lower is better)
Translates to: ESGCLSVSELCVPNW*VLGLTDFKTDAADP
Trigger: AGGGTCTGCGGCGTCAGTCTTGAAGTCAGTGAGACCAAGAACCCACCAATTCGGGACACATAGCTCACTGACTGACAGGCAGCCACTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558828.5
CDS CCA 90 bp GGCCCACCTGGCAGCCATCTGCTTAAGAACCTATGTGTCCCGAATTaGTGGGTTCTTGGTCTCACTGACTTCAAGACTGACGCCGCAGAC +
Preference number: 5 (lower is better)
Translates to: GPPGSHLLKNLCVPN*WVLGLTDFKTDAAD
Trigger: GTCTGCGGCGTCAGTCTTGAAGTCAGTGAGACCAAGAACCCACCAATTCGGGACACATAGGTTCTTAAGCAGATGGCTGCCAGGTGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558793.1
CDS-3UTR CAA 90 bp TTGAGCTTGGGCTTAGGCTTGGGCTCAGCTTTTGACCCTCAGGCATCTCCTTTCGAGATGTGTTCCCACTaGTCCTGGCGCTTGAAGCCC +
Preference number: 5 (lower is better)
Translates to: LSLGLGLGSAFDPQASPFEMCSH*SWRLKP
Trigger: GGGCTTCAAGCGCCAGGACAAGTGGGAACACATCTC...GAAAGGAGATGCCTGAGGGTCAAAAGCTGAGCCCAAGCCTAAGCCCAAGCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CAA 90 bp AAGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTATAGAATGCCATGCTGGGGCTaGAGCTTGAGCTTGGGCTTA +
Preference number: 5 (lower is better)
Translates to: KRPGAQEEARNACPLFYRMPCWG*SLSLGL
Trigger: TAAGCCCAAGCTCAAGCTCAAGCCCCAGCATGGCAT...TCTATAGAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS CCA 90 bp CACTGGGCATTATTCACCTTCTCTGGCACTGAGAGCTCGAGAGCATaGTTCAGGGACTCTTTGGAGAGTGGCTGCCTGTCAGTCAGTGAG +
Preference number: 5 (lower is better)
Translates to: HWALFTFSGTESSRA*FRDSLESGCLSVSE
Trigger: CTCACTGACTGACAGGCAGCCACTCTCCAAAGAGTCCCTGAACCATGCTCTCGAGCTCTCAGTGCCAGAGAAGGTGAATAATGCCCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258873.9
ENST00000558130.1
ENST00000558828.5
ENST00000559241.5
CDS CCA 90 bp CCTTCTCTGGCACTGAGAGCTCGAGAGCATGGTTCAGGGACTCTTTaGAGAGTGGCTGCCTGTCAGTCAGTGAGCTGCTTCTCACATTCA +
Preference number: 5 (lower is better)
Translates to: PSLALRAREHGSGTL*RVAACQSVSCFSHS
Trigger: TGAATGTGAGAAGCAGCTCACTGACTGACAGGCAGCCACTCTCCAAAGAGTCCCTGAACCATGCTCTCGAGCTCTCAGTGCCAGAGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559241.5
CDS CCA 90 bp TTGGAGAGTGGCTGCCTGTCAGTCAGTGAGCTATGTGTCCCGAATTaGTGGGTTCTTGGTCTCACTGACTTCAAGACTGACGCCGCAGAC +
Preference number: 5 (lower is better)
Translates to: LESGCLSVSELCVPN*WVLGLTDFKTDAAD
Trigger: GTCTGCGGCGTCAGTCTTGAAGTCAGTGAGACCAAGAACCCACCAATTCGGGACACATAGCTCACTGACTGACAGGCAGCCACTCTCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558828.5
CDS CCA 90 bp CCTTCTCTGGCACTGAGAGCTCGAGAGCATGGTTCAGGGACTCTTTaGAGAGTGGCTGCCTGTCAGTCAGTGAGCTATGTGTCCCGAATT +
Preference number: 5 (lower is better)
Translates to: PSLALRAREHGSGTL*RVAACQSVSYVSRI
Trigger: AATTCGGGACACATAGCTCACTGACTGACAGGCAGCCACTCTCCAAAGAGTCCCTGAACCATGCTCTCGAGCTCTCAGTGCCAGAGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558828.5
CDS CCA 90 bp CCACCTGGCAGCCATCTGCTTAAGAACCTATGTGTCCCGAATTGGTaGGTTCTTGGTCTCACTGACTTCAAGACTGACGCCGCAGACCCT +
Preference number: 5 (lower is better)
Translates to: PPGSHLLKNLCVPNW*VLGLTDFKTDAADP
Trigger: AGGGTCTGCGGCGTCAGTCTTGAAGTCAGTGAGACCAAGAACCCACCAATTCGGGACACATAGGTTCTTAAGCAGATGGCTGCCAGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558793.1
CDS-3UTR CAA 90 bp CTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTATAGAAACTGCAGGCATATATCCAGCTCCAGAATaGCGTGGCATCTGCCTCGGG +
Preference number: 5 (lower is better)
Translates to: LRKRLGTPALYSIETAGIYPAPE*RGICLG
Trigger: CCCGAGGCAGATGCCACGCAATTCTGGAGCTGGATA...TATGCCTGCAGTTTCTATAGAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258873.9
ENST00000560124.5
CDS-3UTR CAA 90 bp ACTCTGCACCCGTTAAACAGTAACTTTCCCTTCCCCCTCCCATCCTCTGACACCTGGTTCAGGGACTCTTaGGAGAGTGGCTGCCTGTCA +
Preference number: 5 (lower is better)
Translates to: TLHPLNSNFPFPLPSSDTWFRDS*ESGCLS
Trigger: TGACAGGCAGCCACTCTCCAAAGAGTCCCTGAACCA...GGTGTCAGAGGATGGGAGGGGGAAGGGAAAGTTACTGTTTAACGGGTGCAGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CAA 90 bp CACCTCCTGGATGCGCTCCATGATCTTCTCCCATACCCGGGGCACCCCCATGTGGCAGAACTCCATAGCTaGTTCAGTCAGATTATCAGT +
Preference number: 5 (lower is better)
Translates to: HLLDALHDLLPYPGHPHVAELHS*FSQIIS
Trigger: ACTGATAATCTGACTGAACAAGCTATGGAGTTCTGC...CACATGGGGGTGCCCCGGGTATGGGAGAAGATCATGGAGCGCATCCAGGAGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560124.5
CDS GCA 90 bp ACTGAGAGCTCGAGAGCATGGTTCAGGGACTCTTTGGAGAGTGGCTaGCTGTCAGTCAGTGAGCTATGTGTCCCGAATTGGTGGGTTCTT +
Preference number: 5 (lower is better)
Translates to: TESSRAWFRDSLESG*LSVSELCVPNWWVL
Trigger: AAGAACCCACCAATTCGGGACACATAGCTCACTGACTGACAGGCAGCCACTCTCCAAAGAGTCCCTGAACCATGCTCTCGAGCTCTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558828.5
CDS-3UTR CAA 90 bp TTGGGAGTAGGAGATGTGTTCCCACTTGTCCTGGCGCTTGAAGCCCAAAGCGATGGCGAGCAGGTAGTATaGGGAGTAGGAGATGTGTTC +
Preference number: 5 (lower is better)
Translates to: LGVGDVFPLVLALEAQSDGEQVV*GVGDVF
Trigger: GAACACATCTCCTACTCCCAATACTACCTGCTCGCC...ATCGCTTTGGGCTTCAAGCGCCAGGACAAGTGGGAACACATCTCCTACTCCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
CDS-3UTR CAA 90 bp CAGCTGCTTCTGCGTGTCGACCATGATGACATTGGCGCAGCAGTCATAAGCGATGCATACAAGCGGATGTaGAGACCCAGGAAGAAGTGC +
Preference number: 5 (lower is better)
Translates to: QLLLRVDHDDIGAAVISDAYKRM*RPRKKC
Trigger: GCACTTCTTCCTGGGTCTCAACATCCGCTTGTATGC...ATCGCTTATGACTGCTGCGCCAATGTCATCATGGTCGACACGCAGAAGCAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559707.5
CDS-3UTR CAA 90 bp AAAATTATGCCATGCTGGGGCTTGAGCTTGAGCTTGGGCTTAGGCTTGGGCTCAGCTTGGGCTCAGCTTTaGACCCTCAGGCATCTCCTT +
Preference number: 5 (lower is better)
Translates to: KIMPCWGLSLSLGLGLGSAWAQL*TLRHLL
Trigger: AAGGAGATGCCTGAGGGTCAAAAGCTGAGCCCAAGC...TGAGCCCAAGCCTAAGCCCAAGCTCAAGCTCAAGCCCCAGCATGGCATAATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CAA 90 bp TGTGCCCAGACTGAAGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTACAGTATTTGTCCTTaGAGTCTGGCTTATTTCACT +
Preference number: 5 (lower is better)
Translates to: CAQTEETWGSGRGSERLPYSICP*SLAYFT
Trigger: AGTGAAATAAGCCAGACTCAAAGGACAAATACTGTA...GGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCTTCAGTCTGGGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CAA 90 bp AGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTATAGAATCTATGTGTCCCGAATaGGTGGGTTCTTGGTCTCAC +
Preference number: 5 (lower is better)
Translates to: RDLGLRKRLGTPALYSIESMCPE*VGSWSH
Trigger: GTGAGACCAAGAACCCACCAATTCGGGACACATAGA...TTCTATAGAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560817.5
CDS TCA 90 bp CTCGCGGTCTTGCTGGCTTCAGGAATGAAGCTGCAGACTTTCCAGTaGGTGTTACAGCTCATAAAAGCAGCGTGGACCCAAAGACTGAGC +
Preference number: 5 (lower is better)
Translates to: LAVLLASGMKLQTFQ*VLQLIKAAWTQRLS
Trigger: GCTCAGTCTTTGGGTCCACGCTGCTTTTATGAGCTGTAACACTCACTGGAAAGTCTGCAGCTTCATTCCTGAAGCCAGCAAGACCGCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558793.1
ENST00000558828.5
ENST00000560817.5
CDS-3UTR CAA 90 bp ACTTCATTCCCCAGCTCCATGAATTCCTCCATCGTGTACACATTGGCCATCTTGTATCCAGCTCCAGAATaGCGTGGCATCTGCCTCGGG +
Preference number: 5 (lower is better)
Translates to: TSFPSSMNSSIVYTLAILYPAPE*RGICLG
Trigger: CCCGAGGCAGATGCCACGCAATTCTGGAGCTGGATA...CAAGATGGCCAATGTGTACACGATGGAGGAATTCATGGAGCTGGGGAATGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559707.5
ENST00000560124.5
CDS-3UTR CAA 90 bp TTGGCCATCTTGTTTGGAGGAGGTTCTTTATATATCACGACTGCCTTTAGATGTAGCTTCAGGAAGCCCTaGGCGGCTCTGCGGGCGAGC +
Preference number: 5 (lower is better)
Translates to: LAILFGGGSLYITTAFRCSFRKP*AALRAS
Trigger: GCTCGCCCGCAGAGCCGCCAAGGGCTTCCTGAAGCT...ACATCTAAAGGCAGTCGTGATATATAAAGAACCTCCTCCAAACAAGATGGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
CDS-3UTR CAA 90 bp ACGATGCCACCTGCAAATACTGTGCCCACTGCCGAGAAGAACCACTCCGGGGAGTACACATTGGCCATCTaGTTTGGAGGAGGTTCTTTA +
Preference number: 5 (lower is better)
Translates to: TMPPANTVPTAEKNHSGEYTLAI*FGGGSL
Trigger: TAAAGAACCTCCTCCAAACAAGATGGCCAATGTGTA...CTCCCCGGAGTGGTTCTTCTCGGCAGTGGGCACAGTATTTGCAGGTGGCATCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
CDS-3UTR CAA 90 bp CAGACTGAAGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTTACACATTGGCCATCTaGTTTGGAGGAGGTTCTTTA +
Preference number: 5 (lower is better)
Translates to: QTEETWGSGRGSERLPSIYTLAI*FGGGSL
Trigger: TAAAGAACCTCCTCCAAACAAGATGGCCAATGTGTA...AATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCTTCAGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CAA 90 bp AGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTATAGAATCATTTTGGCTCAGCTaGCTACTGAGAATGGCTGCT +
Preference number: 5 (lower is better)
Translates to: RDLGLRKRLGTPALYSIESFWLS*LLRMAA
Trigger: AGCAGCCATTCTCAGTAGCAAGCTGAGCCAAAATGA...TTCTATAGAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CAA 90 bp CACAAAATTATGCCATGCTGGGGCTTGAGCTTGAGCTTGGGCTTAGGCTTGGGCATGCCTTCGGTCATTTaGGCTCAGCTTGCTACTGAG +
Preference number: 5 (lower is better)
Translates to: HKIMPCWGLSLSLGLGLGMPSVI*AQLATE
Trigger: CTCAGTAGCAAGCTGAGCCAAAATGACCGAAGGCAT...GCCCAAGCCTAAGCCCAAGCTCAAGCTCAAGCCCCAGCATGGCATAATTTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS CCA 90 bp CCTTCTCTGGCACTGAGAGCTCGAGAGCATGGTTCAGGGACTCTTTaGAGAGTGGCTGCCTGTCAGTCAGTGAGCTGGTTTTCAATTTTT +
Preference number: 5 (lower is better)
Translates to: PSLALRAREHGSGTL*RVAACQSVSWFSIF
Trigger: AAAAATTGAAAACCAGCTCACTGACTGACAGGCAGCCACTCTCCAAAGAGTCCCTGAACCATGCTCTCGAGCTCTCAGTGCCAGAGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258873.9
ENST00000558130.1
CDS-3UTR CAA 90 bp AGACTGAAGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCGGTTTTCAATTTTTCTaGGGTGGTCCTCACAATCAT +
Preference number: 5 (lower is better)
Translates to: RLKRPGAQEEARNACPLFGFQFF*GGPHNH
Trigger: ATGATTGTGAGGACCACCCAAGAAAAATTGAAAACC...GAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCTTCAGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258873.9
ENST00000560124.5
CDS-3UTR CAA 90 bp CATTGGCCATCTTGTTTGGAGGAGGTTCTTTATATATCACGACTGCCTTTAGATCTCAGCATCACGCCCTaGGGGTTCCCAGTGGTGCCG +
Preference number: 5 (lower is better)
Translates to: HWPSCLEEVLYISRLPLDLSITP*GFPVVP
Trigger: CGGCACCACTGGGAACCCCAAGGGCGTGATGCTGAG...ATCTAAAGGCAGTCGTGATATATAAAGAACCTCCTCCAAACAAGATGGCCAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559707.5
CDS-3UTR CAA 90 bp GCTAGCAGCTTTTTAATCTACCTGGAACTAAGGCCAAAAATTATCAGCCCTTTCCTCAGCATCACGCCCTaGGGGTTCCCAGTGGTGCCG +
Preference number: 5 (lower is better)
Translates to: ASSFLIYLELRPKIISPFLSITP*GFPVVP
Trigger: CGGCACCACTGGGAACCCCAAGGGCGTGATGCTGAG...GAAAGGGCTGATAATTTTTGGCCTTAGTTCCAGGTAGATTAAAAAGCTGCTAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CAA 90 bp ATCTTTTCCAGCTGCTTCTGCGTGTCGACCATGATGACATTGGCGCAGCAGTCACCACGTGATATTGTCTaGACTCAGCATCACGCCCTT +
Preference number: 5 (lower is better)
Translates to: IFSSCFCVSTMMTLAQQSPRDIV*TQHHAL
Trigger: AAGGGCGTGATGCTGAGTCAAGACAATATCACGTGG...TGACTGCTGCGCCAATGTCATCATGGTCGACACGCAGAAGCAGCTGGAAAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559707.5
CDS-3UTR CAA 90 bp GTTGTGACTGATTGCTTTTCCTGCAGCGCACGTGAGCAGTATCAGCCATCTCTCCCACGTGATATTGTCTaGACTCAGCATCACGCCCTT +
Preference number: 5 (lower is better)
Translates to: VVTDCFSCSAREQYQPSLPRDIV*TQHHAL
Trigger: AAGGGCGTGATGCTGAGTCAAGACAATATCACGTGG...GAGAGATGGCTGATACTGCTCACGTGCGCTGCAGGAAAAGCAATCAGTCACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CAA 90 bp ATTCCAAAACTGAGATGTTTGCTTTCTCTACCTGTTTCCTGTTCAGATGCCTTCGCCGCCGCGTTCATGTaGACCCTCCGGATCCCCTCT +
Preference number: 5 (lower is better)
Translates to: IPKLRCLLSLPVSCSDAFAAAFM*TLRIPS
Trigger: AGAGGGGATCCGGAGGGTCAACATGAACGCGGCGGC...GAAGGCATCTGAACAGGAAACAGGTAGAGAAAGCAAACATCTCAGTTTTGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CAA 90 bp GCCGTACCGTGCCGTCCACGTGATATTGTCTTGACTCAGCATCACGCCCTTGGGGAGTCAATGATACCTTaGTACTTCTCCAAAACTGTG +
Preference number: 5 (lower is better)
Translates to: AVPCRPRDIVLTQHHALGESMIP*YFSKTV
Trigger: CACAGTTTTGGAGAAGTACAAAGGTATCATTGACTC...CCCAAGGGCGTGATGCTGAGTCAAGACAATATCACGTGGACGGCACGGTACGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560124.5
CDS-3UTR CAA 90 bp AACTACCCACACGTGAAGCTTCTTGGAATTGTCAGCTATTGTTGGCGTAAGACCGGCTTGAGCTTGAGCTaGGGCTTAGGCTTGGGCTCA +
Preference number: 5 (lower is better)
Translates to: NYPHVKLLGIVSYCWRKTGLSLS*GLGLGS
Trigger: TGAGCCCAAGCCTAAGCCCAAGCTCAAGCTCAAGCC...GGTCTTACGCCAACAATAGCTGACAATTCCAAGAAGCTTCACGTGTGGGTAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CAA 90 bp AGACTGAAGAGACCTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCCTACGTATGTATGCATaGGTTTGCTTGTTTCTTGAC +
Preference number: 5 (lower is better)
Translates to: RLKRPGAQEEARNACPLFLRMYA*VCLFLD
Trigger: GTCAAGAAACAAGCAAACCAATGCATACATACGTAG...GAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAGGTCTCTTCAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CAA 90 bp ACTGAATTAAAACTACCCACACGTGAAGCTTCTTGGAATTGTCAGCTATTGTTGGCCGCCGCGTTCATGTaGACCCTCCGGATCCCCTCT +
Preference number: 5 (lower is better)
Translates to: TELKLPTREASWNCQLLLAAAFM*TLRIPS
Trigger: AGAGGGGATCCGGAGGGTCAACATGAACGCGGCGGC...CAACAATAGCTGACAATTCCAAGAAGCTTCACGTGTGGGTAGTTTTAATTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CAA 90 bp CTGGGGCTCAGGAAGAGGCTCGGAACGCCTGCCCTCTATTCTATAGAAACTGCACATTGGCCATCTTGTTaGGAGGAGGTTCTTTATATA +
Preference number: 5 (lower is better)
Translates to: LGLRKRLGTPALYSIETAHWPSC*EEVLYI
Trigger: TATATAAAGAACCTCCTCCAAACAAGATGGCCAATG...TGCAGTTTCTATAGAATAGAGGGCAGGCGTTCCGAGCCTCTTCCTGAGCCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CAA 90 bp TTGAGCTTGGGCTTAGGCTTGGGCTCAGCTTTTGACCCTCAGGCATCTCCTTTCTACACATTGGCCATCTaGTTTGGAGGAGGTTCTTTA +
Preference number: 5 (lower is better)
Translates to: LSLGLGLGSAFDPQASPFYTLAI*FGGGSL
Trigger: TAAAGAACCTCCTCCAAACAAGATGGCCAATGTGTA...GAAAGGAGATGCCTGAGGGTCAAAAGCTGAGCCCAAGCCTAAGCCCAAGCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS GCA 90 bp TTTTGTTTGGTTTGGTTCCTTACTAAGCACATGTACTATGCCGAGTaGCTTGTGTTGGCTTCTCCCATTCTCTCCACGGCCCTGGTTTTC +
Preference number: 5 (lower is better)
Translates to: FCLVWFLTKHMYYAE*LVLASPILSTALVF
Trigger: GAAAACCAGGGCCGTGGAGAGAATGGGAGAAGCCAACACAAGGCACTCGGCATAGTACATGTGCTTAGTAAGGAACCAAACCAAACAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559713.1
CDS-3UTR CAA 90 bp TTGGGAGTAGGAGATGTGTTCCCACTTGTCCTGGCGCTTGAAGCCCAAAGCGATCATTGGCCATCTTGTTaGGAGGAGGTTCTTTATATA +
Preference number: 5 (lower is better)
Translates to: LGVGDVFPLVLALEAQSDHWPSC*EEVLYI
Trigger: TATATAAAGAACCTCCTCCAAACAAGATGGCCAATG...ATCGCTTTGGGCTTCAAGCGCCAGGACAAGTGGGAACACATCTCCTACTCCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
CDS-3UTR CAA 90 bp CTACCTGGAACTAAGGCCAAAAATTATCAGCCCTTTCGTTCTGGAAGGAGAGCTCCACGTGATATTGTCTaGACTCAGCATCACGCCCTT +
Preference number: 5 (lower is better)
Translates to: LPGTKAKNYQPFRSGRRAPRDIV*TQHHAL
Trigger: AAGGGCGTGATGCTGAGTCAAGACAATATCACGTGG...AGCTCTCCTTCCAGAACGAAAGGGCTGATAATTTTTGGCCTTAGTTCCAGGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CAA 90 bp GTTGTGACTGATTGCTTTTCCTGCAGCGCACGTGAGCAGTATCAGCCATCTCTCCATTGGCCATCTTGTTaGGAGGAGGTTCTTTATATA +
Preference number: 5 (lower is better)
Translates to: VVTDCFSCSAREQYQPSLHWPSC*EEVLYI
Trigger: TATATAAAGAACCTCCTCCAAACAAGATGGCCAATG...GAGAGATGGCTGATACTGCTCACGTGCGCTGCAGGAAAAGCAATCAGTCACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS CCA 90 bp TTTGGTTCCTTACTAAGCACATGTACTATGCCGAGTGCCTTGTGTTaGCTTCTCCCATTCTCTCCACGGCCCTGGTTTTCAATTTTTCTT +
Preference number: 5 (lower is better)
Translates to: FGSLLSTCTMPSALC*LLPFSPRPWFSIFL
Trigger: AAGAAAAATTGAAAACCAGGGCCGTGGAGAGAATGGGAGAAGCCAACACAAGGCACTCGGCATAGTACATGTGCTTAGTAAGGAACCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559713.1
CDS-3UTR CAA 90 bp ATTCCAAAACTGAGATGTTTGCTTTCTCTACCTGTTTCCTGTTCAGATGCCTTCATGAGAATGCGCCACTaGACCCCATCCTGCACCTTT +
Preference number: 5 (lower is better)
Translates to: IPKLRCLLSLPVSCSDAFMRMRH*TPSCTF
Trigger: AAAGGTGCAGGATGGGGTCAAGTGGCGCATTCTCAT...GAAGGCATCTGAACAGGAAACAGGTAGAGAAAGCAAACATCTCAGTTTTGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CAA 90 bp ATTCCAAAACTGAGATGTTTGCTTTCTCTACCTGTTTCCTGTTCAGATGCCTTCGCTCCCTGCCTCCCTTaGCATCAAGAGCACCTTATT +
Preference number: 5 (lower is better)
Translates to: IPKLRCLLSLPVSCSDAFAPCLP*HQEHLI
Trigger: AATAAGGTGCTCTTGATGCAAAGGGAGGCAGGGAGC...GAAGGCATCTGAACAGGAAACAGGTAGAGAAAGCAAACATCTCAGTTTTGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CAA 90 bp AACTACCCACACGTGAAGCTTCTTGGAATTGTCAGCTATTGTTGGCGTAAGACCGGTAGAACAGATCAGTaGTATGGGAGGCTTTCTTTC +
Preference number: 5 (lower is better)
Translates to: NYPHVKLLGIVSYCWRKTGRTDQ*YGRLSF
Trigger: GAAAGAAAGCCTCCCATACAACTGATCTGTTCTACC...GGTCTTACGCCAACAATAGCTGACAATTCCAAGAAGCTTCACGTGTGGGTAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CAA 90 bp CAGCTTTTTAATCTACCTGGAACTAAGGCCAAAAATTATCAGCCCTTTCGTTCTGGCGAGCAGGTAGTATaGGGAGTAGGAGATGTGTTC +
Preference number: 5 (lower is better)
Translates to: QLFNLPGTKAKNYQPFRSGEQVV*GVGDVF
Trigger: GAACACATCTCCTACTCCCAATACTACCTGCTCGCC...AGAACGAAAGGGCTGATAATTTTTGGCCTTAGTTCCAGGTAGATTAAAAAGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CAA 90 bp AATTTTGGTAAAGCTCCCTGCCTCCCTTTGCATCAAGAGCACCTTATTCTTTGCGCAGAACTCCATAGCTaGTTCAGTCAGATTATCAGT +
Preference number: 5 (lower is better)
Translates to: NFGKAPCLPLHQEHLILCAELHS*FSQIIS
Trigger: ACTGATAATCTGACTGAACAAGCTATGGAGTTCTGC...GCAAAGAATAAGGTGCTCTTGATGCAAAGGGAGGCAGGGAGCTTTACCAAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CAA 90 bp TACCTGGAACTAAGGCCAAAAATTATCAGCCCTTTCGTTCTGGAAGGAGAGCTGATATTTCTTTCGTATTaGTGTCCCAGCCTCCAAAAA +
Preference number: 5 (lower is better)
Translates to: YLELRPKIISPFVLEGELIFLSY*CPSLQK
Trigger: TTTTTGGAGGCTGGGACACAAATACGAAAGAAATAT...CAGCTCTCCTTCCAGAACGAAAGGGCTGATAATTTTTGGCCTTAGTTCCAGGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CAA 90 bp TCTTGTTTGGAGGAGGTTCTTTATATATCACGACTGCCTTTAGATGTGGCAACTTACACATTGGCCATCTaGTTTGGAGGAGGTTCTTTA +
Preference number: 5 (lower is better)
Translates to: SCLEEVLYISRLPLDVATYTLAI*FGGGSL
Trigger: TAAAGAACCTCCTCCAAACAAGATGGCCAATGTGTA...AGTTGCCACATCTAAAGGCAGTCGTGATATATAAAGAACCTCCTCCAAACAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557935.1
ENST00000559707.5
CDS-3UTR CAA 90 bp GCTAGCAGCTTTTTAATCTACCTGGAACTAAGGCCAAAAATTATCAGCCCTTTCGCAGAACTCCATAGCTaGTTCAGTCAGATTATCAGT +
Preference number: 5 (lower is better)
Translates to: ASSFLIYLELRPKIISPFAELHS*FSQIIS
Trigger: ACTGATAATCTGACTGAACAAGCTATGGAGTTCTGC...GAAAGGGCTGATAATTTTTGGCCTTAGTTCCAGGTAGATTAAAAAGCTGCTAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CAA 90 bp AGAGAGGTGCCTGAATTACATAGTGGGCCCTTTTATTGTGTAGGATGGAAAGATGAGTCAATGATACCTTaGTACTTCTCCAAAACTGTG +
Preference number: 5 (lower is better)
Translates to: REVPELHSGPFYCVGWKDESMIP*YFSKTV
Trigger: CACAGTTTTGGAGAAGTACAAAGGTATCATTGACTC...ATCTTTCCATCCTACACAATAAAAGGGCCCACTATGTAATTCAGGCACCTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CAA 90 bp ATTCCAAAACTGAGATGTTTGCTTTCTCTACCTGTTTCCTGTTCAGATGCCTTCCCTGTCTCTATGAATTaGACTACTCTAGGTACCTCA +
Preference number: 5 (lower is better)
Translates to: IPKLRCLLSLPVSCSDAFPVSMN*TTLGTS
Trigger: TGAGGTACCTAGAGTAGTCAAATTCATAGAGACAGG...GAAGGCATCTGAACAGGAAACAGGTAGAGAAAGCAAACATCTCAGTTTTGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258873.9
CDS-3UTR CAA 90 bp CAGCTTTTTAATCTACCTGGAACTAAGGCCAAAAATTATCAGCCCTTTCGTTCTTACACATTGGCCATCTaGTTTGGAGGAGGTTCTTTA +
Preference number: 5 (lower is better)
Translates to: QLFNLPGTKAKNYQPFRSYTLAI*FGGGSL
Trigger: TAAAGAACCTCCTCCAAACAAGATGGCCAATGTGTA...AGAACGAAAGGGCTGATAATTTTTGGCCTTAGTTCCAGGTAGATTAAAAAGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CAA 90 bp GCTAGCAGCTTTTTAATCTACCTGGAACTAAGGCCAAAAATTATCAGCCCTTTCGAGTCAATGATACCTTaGTACTTCTCCAAAACTGTG +
Preference number: 5 (lower is better)
Translates to: ASSFLIYLELRPKIISPFESMIP*YFSKTV
Trigger: CACAGTTTTGGAGAAGTACAAAGGTATCATTGACTC...GAAAGGGCTGATAATTTTTGGCCTTAGTTCCAGGTAGATTAAAAAGCTGCTAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS-3UTR CAA 90 bp ACTGAATTAAAACTACCCACACGTGAAGCTTCTTGGAATTGTCAGCTATTGTTGCATTGGCCATCTTGTTaGGAGGAGGTTCTTTATATA +
Preference number: 5 (lower is better)
Translates to: TELKLPTREASWNCQLLLHWPSC*EEVLYI
Trigger: TATATAAAGAACCTCCTCCAAACAAGATGGCCAATG...CAACAATAGCTGACAATTCCAAGAAGCTTCACGTGTGGGTAGTTTTAATTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258873.9
ENST00000560124.5
ENST00000560817.5
CDS GCA 90 bp TTATATATCACGACTGCCTTTAGATGTGGCAACTGTTTCCAGATCTaGATTGACAGGAAAAATAGATCAGGTTTCAGTAAGAGAAATGTC +
Preference number: 5 (lower is better)
Translates to: LYITTAFRCGNCFQI*IDRKNRSGFSKRNV
Trigger: GACATTTCTCTTACTGAAACCTGATCTATTTTTCCTGTCAATGCAGATCTGGAAACAGTTGCCACATCTAAAGGCAGTCGTGATATATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558728.1
CDS CCA 72 bp GCAGTGGCAGGCCCTCCAAAGCAACTCACACCTGCTTaGGGGCTGGTGGCAGCACCCCGACGACAAATGCTC +
Preference number: 6 (lower is better)
Translates to: AVAGPPKQLTPA*GLVAAPRRQML
Trigger: GAGCATTTGTCGTCGGGGTGCTGCCACCAGCCCCCAAGCAGGTGTGAGTTGCTTTGGAGGGCCTGCCACTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560183.1
CDS CAA 72 bp GGGTCCCCGTGTGGGCAGCCGTATCCAGCTCCAGAATaGCGTGGCATCTGCCTCGGGCTTCCACTGAAGACA +
Preference number: 6 (lower is better)
Translates to: GSPCGQPYPAPE*RGICLGLPLKT
Trigger: TGTCTTCAGTGGAAGCCCGAGGCAGATGCCACGCAATTCTGGAGCTGGATACGGCTGCCCACACGGGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258873.9
ENST00000557935.1
ENST00000559707.5
ENST00000559713.1
CDS CAA 72 bp AGCAGTGGCAGGCCCTCCAAAGCAACTCACACCTGCTaGGGGGCTGGTGGCAGCACCCCGACGACAAATGCT +
Preference number: 6 (lower is better)
Translates to: SSGRPSKATHTC*GAGGSTPTTNA
Trigger: AGCATTTGTCGTCGGGGTGCTGCCACCAGCCCCCAAGCAGGTGTGAGTTGCTTTGGAGGGCCTGCCACTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560183.1
CDS CAA 90 bp AGCATGCTGGGGTCCCCGTGTGGGCAGCCGTATCCAGCTCCAGAATaGCGTGGCATCTGCCTCGGGCTTCCACTGAAGACAGCTCAGTCA +
Preference number: 6 (lower is better)
Translates to: SMLGSPCGQPYPAPE*RGICLGLPLKTAQS
Trigger: TGACTGAGCTGTCTTCAGTGGAAGCCCGAGGCAGATGCCACGCAATTCTGGAGCTGGATACGGCTGCCCACACGGGGACCCCAGCATGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258873.9
ENST00000557935.1
ENST00000559707.5
ENST00000559713.1
CDS CAA 90 bp GAGCCAAGAAGCAGTGGCAGGCCCTCCAAAGCAACTCACACCTGCTaGGGGGCTGGTGGCAGCACCCCGACGACAAATGCTCACCCAAGT +
Preference number: 6 (lower is better)
Translates to: EPRSSGRPSKATHTC*GAGGSTPTTNAHPS
Trigger: ACTTGGGTGAGCATTTGTCGTCGGGGTGCTGCCACCAGCCCCCAAGCAGGTGTGAGTTGCTTTGGAGGGCCTGCCACTGCTTCTTGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560183.1
CDS CAA 90 bp CCTGCAAATACTGTGCCCACTGCCGAGAAGAACCACTCCGGGGAGTaGAAGCCGAGGATGGCCACACTGTGGGCCTGCTTCAGGAAGCCC +
Preference number: 6 (lower is better)
Translates to: PANTVPTAEKNHSGE*KPRMATLWACFRKP
Trigger: GGGCTTCCTGAAGCAGGCCCACAGTGTGGCCATCCTCGGCTTCAACTCCCCGGAGTGGTTCTTCTCGGCAGTGGGCACAGTATTTGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558130.1
CDS GCA 72 bp GGGCAGCCGTATCCAGCTCCAGAATTGCGTGGCATCTaGCTCGGGCTTCCACTGAAGACAGCTCAGTCACCC +
Preference number: 6 (lower is better)
Translates to: GQPYPAPELRGI*LGLPLKTAQSP
Trigger: GGGTGACTGAGCTGTCTTCAGTGGAAGCCCGAGGCAGATGCCACGCAATTCTGGAGCTGGATACGGCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258873.9
ENST00000557935.1
ENST00000559707.5
ENST00000559713.1
CDS GCA 72 bp CTGCTTGGGGGCTGGTGGCAGCACCCCGACGACAAATaGTCACCCAAGTTTCCCTCTCCTCGGCTTGTCATC +
Preference number: 6 (lower is better)
Translates to: LLGGWWQHPDDK*SPKFPSPRLVI
Trigger: GATGACAAGCCGAGGAGAGGGAAACTTGGGTGAGCATTTGTCGTCGGGGTGCTGCCACCAGCCCCCAAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560183.1
CDS GCA 72 bp AGAAGCAGTGGCAGGCCCTCCAAAGCAACTCACACCTaGTTGGGGGCTGGTGGCAGCACCCCGACGACAAAT +
Preference number: 6 (lower is better)
Translates to: RSSGRPSKATHT*LGAGGSTPTTN
Trigger: ATTTGTCGTCGGGGTGCTGCCACCAGCCCCCAAGCAGGTGTGAGTTGCTTTGGAGGGCCTGCCACTGCTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560183.1
CDS GCA 72 bp CACTGTGGGCCTGCTTCAGGAAGCCCTTGGCGGCTCTaGGGGCGAGCAGGTAGTATTGGGAGTAGGAGATGT +
Preference number: 6 (lower is better)
Translates to: HCGPASGSPWRL*GRAGSIGSRRC
Trigger: ACATCTCCTACTCCCAATACTACCTGCTCGCCCGCAGAGCCGCCAAGGGCTTCCTGAAGCAGGCCCACAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558130.1
CDS CAA 90 bp CTGCTTCAGGAAGCCCTTGGCGGCTCTGCGGGCGAGCAGGTAGTATaGGGAGTAGGAGATGTGTTCCCACTTGTCCTGGCGCTTGAAGCC +
Preference number: 6 (lower is better)
Translates to: LLQEALGGSAGEQVV*GVGDVFPLVLALEA
Trigger: GGCTTCAAGCGCCAGGACAAGTGGGAACACATCTCCTACTCCCAATACTACCTGCTCGCCCGCAGAGCCGCCAAGGGCTTCCTGAAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558130.1
CDS CCA 72 bp GCCCTCCAAAGCAACTCACACCTGCTTGGGGGCTGGTaGCAGCACCCCGACGACAAATGCTCACCCAAGTTT +
Preference number: 6 (lower is better)
Translates to: ALQSNSHLLGGW*QHPDDKCSPKF
Trigger: AAACTTGGGTGAGCATTTGTCGTCGGGGTGCTGCCACCAGCCCCCAAGCAGGTGTGAGTTGCTTTGGAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560183.1
CDS CCA 72 bp GACCTATATGGCACGGGACCCAGTTGCCCACCTGTGTaGCTCTTACATAAGAAGGGTGGGCGGCAGGAGAGG +
Preference number: 6 (lower is better)
Translates to: DLYGTGPSCPPV*LLHKKGGRQER
Trigger: CCTCTCCTGCCGCCCACCCTTCTTATGTAAGAGCCACACAGGTGGGCAACTGGGTCCCGTGCCATATAGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559713.1
CDS CAA 90 bp GCTGCCTGTCAGTCAGTGAGCTATGTGTCCCGAATTGGTGGGTTCTaGGTCTCACTGACTTCAAGACTGACGCCGCAGACCCTCGCGGTG +
Preference number: 6 (lower is better)
Translates to: AACQSVSYVSRIGGF*VSLTSRLTPQTLAV
Trigger: CACCGCGAGGGTCTGCGGCGTCAGTCTTGAAGTCAGTGAGACCAAGAACCCACCAATTCGGGACACATAGCTCACTGACTGACAGGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558828.5
CDS TCA 72 bp CTAGGGCTGCTGTTGAGGTGTAGCCCCAGATACCTCTaGCCTATATGGCACGGGACCCAGTTGCCCACCTGT +
Preference number: 6 (lower is better)
Translates to: LGLLLRCSPRYL*PIWHGTQLPTC
Trigger: ACAGGTGGGCAACTGGGTCCCGTGCCATATAGGTCAGAGGTATCTGGGGCTACACCTCAACAGCAGCCCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559713.1
CDS GCA 72 bp TTTCCCTCTCCTCGGCTTGTCATCCACGACTCAGCCTaGTCAGACATCTCATCCATGGCCCCCTTCTGCCAG +
Preference number: 6 (lower is better)
Translates to: FPSPRLVIHDSA*SDISSMAPFCQ
Trigger: CTGGCAGAAGGGGGCCATGGATGAGATGTCTGAGCAGGCTGAGTCGTGGATGACAAGCCGAGGAGAGGGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560183.1
CDS CCA 72 bp GCACTGAGAGCTCGAGAGCATGGTTCAGGGACTCTTTaGAGAGTGGCTGCCTGTCAGTCAGTGAGCTGCTTC +
Preference number: 6 (lower is better)
Translates to: ALRAREHGSGTL*RVAACQSVSCF
Trigger: GAAGCAGCTCACTGACTGACAGGCAGCCACTCTCCAAAGAGTCCCTGAACCATGCTCTCGAGCTCTCAGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559241.5
CDS CAA 90 bp GCAGCCATCTGCTTAAGAACCTATGTGTCCCGAATTGGTGGGTTCTaGGTCTCACTGACTTCAAGACTGACGCCGCAGACCCTCGCGGTG +
Preference number: 6 (lower is better)
Translates to: AAICLRTYVSRIGGF*VSLTSRLTPQTLAV
Trigger: CACCGCGAGGGTCTGCGGCGTCAGTCTTGAAGTCAGTGAGACCAAGAACCCACCAATTCGGGACACATAGGTTCTTAAGCAGATGGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558793.1
CDS CCA 72 bp GGATGTGTTCGGAGTTTCTTCCTTCTGGTGGGTTCGTaGTCTCGCTGGCTCAGGAGTGAAGCTGCAGACCTT +
Preference number: 6 (lower is better)
Translates to: GCVRSFFLLVGS*SRWLRSEAADL
Trigger: AAGGTCTGCAGCTTCACTCCTGAGCCAGCGAGACCACGAACCCACCAGAAGGAAGAAACTCCGAACACATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558793.1
ENST00000558828.5
ENST00000560817.5
CDS CCA 72 bp GCACTGAGAGCTCGAGAGCATGGTTCAGGGACTCTTTaGAGAGTGGCTGCCTGTCAGTCAGTGAGCTATGTG +
Preference number: 6 (lower is better)
Translates to: ALRAREHGSGTL*RVAACQSVSYV
Trigger: CACATAGCTCACTGACTGACAGGCAGCCACTCTCCAAAGAGTCCCTGAACCATGCTCTCGAGCTCTCAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558828.5
CDS CAA 72 bp TACATAAGAAGGGTGGGCGGCAGGAGAGGCAGTTTTTaGGCCGTCATCCTTGGCAGAGCCTTGGGAGACAGT +
Preference number: 6 (lower is better)
Translates to: YIRRVGGRRGSF*AVILGRALGDS
Trigger: ACTGTCTCCCAAGGCTCTGCCAAGGATGACGGCCAAAAAACTGCCTCTCCTGCCGCCCACCCTTCTTATGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559713.1
CDS CAA 90 bp ACCTTCTCTGGCACTGAGAGCTCGAGAGCATGGTTCAGGGACTCTTaGGAGAGTGGCTGCCTGTCAGTCAGTGAGCTGCTTCTCACATTC +
Preference number: 6 (lower is better)
Translates to: TFSGTESSRAWFRDS*ESGCLSVSELLLTF
Trigger: GAATGTGAGAAGCAGCTCACTGACTGACAGGCAGCCACTCTCCAAAGAGTCCCTGAACCATGCTCTCGAGCTCTCAGTGCCAGAGAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559241.5
CDS CAA 90 bp TGTGGCAACTGTTTCCAGATCTATGTGTCCCGAATTGGTGGGTTCTaGGTCTCACTGACTTCAAGACTGACGCCGCAGACCCTCGCGGTG +
Preference number: 6 (lower is better)
Translates to: CGNCFQIYVSRIGGF*VSLTSRLTPQTLAV
Trigger: CACCGCGAGGGTCTGCGGCGTCAGTCTTGAAGTCAGTGAGACCAAGAACCCACCAATTCGGGACACATAGATCTGGAAACAGTTGCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560817.5
CDS CAA 90 bp ACCTTCTCTGGCACTGAGAGCTCGAGAGCATGGTTCAGGGACTCTTaGGAGAGTGGCTGCCTGTCAGTCAGTGAGCTATGTGTCCCGAAT +
Preference number: 6 (lower is better)
Translates to: TFSGTESSRAWFRDS*ESGCLSVSELCVPN
Trigger: ATTCGGGACACATAGCTCACTGACTGACAGGCAGCCACTCTCCAAAGAGTCCCTGAACCATGCTCTCGAGCTCTCAGTGCCAGAGAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558828.5
CDS TCA 72 bp CAGGGACTCTTTGGAGAGTGGCTGCCTGTCAGTCAGTaGGCTATGTGTCCCGAATTGGTGGGTTCTTGGTCT +
Preference number: 6 (lower is better)
Translates to: QGLFGEWLPVSQ*AMCPELVGSWS
Trigger: AGACCAAGAACCCACCAATTCGGGACACATAGCTCACTGACTGACAGGCAGCCACTCTCCAAAGAGTCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558828.5
CDS GCA 72 bp TCGAGAGCATGGTTCAGGGACTCTTTGGAGAGTGGCTaGCTGTCAGTCAGTGAGCTGCTTCTCACATTCAGC +
Preference number: 6 (lower is better)
Translates to: SRAWFRDSLESG*LSVSELLLTFS
Trigger: GCTGAATGTGAGAAGCAGCTCACTGACTGACAGGCAGCCACTCTCCAAAGAGTCCCTGAACCATGCTCTCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559241.5
CDS GCA 72 bp TCGAGAGCATGGTTCAGGGACTCTTTGGAGAGTGGCTaGCTGTCAGTCAGTGAGCTATGTGTCCCGAATTGG +
Preference number: 6 (lower is better)
Translates to: SRAWFRDSLESG*LSVSELCVPNW
Trigger: CCAATTCGGGACACATAGCTCACTGACTGACAGGCAGCCACTCTCCAAAGAGTCCCTGAACCATGCTCTCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558828.5
CDS CCA 72 bp CCACAGCGCCTCCTCTGGTTTTCAATTTTTCTTGGGTaGTCCTCACAATCATGTCCTGCCGGCTCTCCTGTG +
Preference number: 6 (lower is better)
Translates to: PQRLLWFSIFLG*SSQSCPAGSPV
Trigger: CACAGGAGAGCCGGCAGGACATGATTGTGAGGACCACCCAAGAAAAATTGAAAACCAGAGGAGGCGCTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559707.5
CDS CCA 72 bp TCGTCCACAGCGCCTCCTCTGGTTTTCAATTTTTCTTaGGTGGTCCTCACAATCATGTCCTGCCGGCTCTCC +
Preference number: 6 (lower is better)
Translates to: SSTAPPLVFNFS*VVLTIMSCRLS
Trigger: GGAGAGCCGGCAGGACATGATTGTGAGGACCACCCAAGAAAAATTGAAAACCAGAGGAGGCGCTGTGGACGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559707.5
CDS CCA 72 bp CCCATTCTCTCCACGGCCCTGGTTTTCAATTTTTCTTaGGTGGTCCTCACAATCATGTCCTGCCGGCTCTCC +
Preference number: 6 (lower is better)
Translates to: PILSTALVFNFS*VVLTIMSCRLS
Trigger: GGAGAGCCGGCAGGACATGATTGTGAGGACCACCCAAGAAAAATTGAAAACCAGGGCCGTGGAGAGAATGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559713.1
CDS CAA 72 bp GTCGTCCACAGCGCCTCCTCTGGTTTTCAATTTTTCTaGGGTGGTCCTCACAATCATGTCCTGCCGGCTCTC +
Preference number: 6 (lower is better)
Translates to: VVHSASSGFQFF*GGPHNHVLPAL
Trigger: GAGAGCCGGCAGGACATGATTGTGAGGACCACCCAAGAAAAATTGAAAACCAGAGGAGGCGCTGTGGACGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559707.5
CDS CAA 72 bp GGTTCCTTACTAAGCACATGTACTATGCCGAGTGCCTaGTGTTGGCTTCTCCCATTCTCTCCACGGCCCTGG +
Preference number: 6 (lower is better)
Translates to: GSLLSTCTMPSA*CWLLPFSPRPW
Trigger: CCAGGGCCGTGGAGAGAATGGGAGAAGCCAACACAAGGCACTCGGCATAGTACATGTGCTTAGTAAGGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559713.1
CDS TCA 72 bp AGCATCCCACTGGGCATTATTCACCTTCTCTGGCACTaGGAGCTCGAGAGCATGGTTCAGGGACTCTTTGGA +
Preference number: 6 (lower is better)
Translates to: SIPLGIIHLLWH*ELESMVQGLFG
Trigger: TCCAAAGAGTCCCTGAACCATGCTCTCGAGCTCTCAGTGCCAGAGAAGGTGAATAATGCCCAGTGGGATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258873.9
ENST00000558130.1
ENST00000558828.5
ENST00000559241.5
CDS CCA 72 bp TTATTCACCTTCTCTGGCACTGAGAGCTCGAGAGCATaGTTCAGGGACTCTTTGGAGAGTGGCTGCCTGTCA +
Preference number: 6 (lower is better)
Translates to: LFTFSGTESSRA*FRDSLESGCLS
Trigger: TGACAGGCAGCCACTCTCCAAAGAGTCCCTGAACCATGCTCTCGAGCTCTCAGTGCCAGAGAAGGTGAATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258873.9
ENST00000558130.1
ENST00000558828.5
ENST00000559241.5
CDS CCA 72 bp TGCCTGTCAGTCAGTGAGCTATGTGTCCCGAATTGGTaGGTTCTTGGTCTCACTGACTTCAAGACTGACGCC +
Preference number: 6 (lower is better)
Translates to: CLSVSELCVPNW*VLGLTDFKTDA
Trigger: GGCGTCAGTCTTGAAGTCAGTGAGACCAAGAACCCACCAATTCGGGACACATAGCTCACTGACTGACAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558828.5
CDS CCA 72 bp GGCTGCCTGTCAGTCAGTGAGCTATGTGTCCCGAATTaGTGGGTTCTTGGTCTCACTGACTTCAAGACTGAC +
Preference number: 6 (lower is better)
Translates to: GCLSVSELCVPN*WVLGLTDFKTD
Trigger: GTCAGTCTTGAAGTCAGTGAGACCAAGAACCCACCAATTCGGGACACATAGCTCACTGACTGACAGGCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558828.5
CDS CCA 72 bp TTCTCTCCACGGCCCTGGTTTTCAATTTTTCTTGGGTaGTCCTCACAATCATGTCCTGCCGGCTCTCCTGTG +
Preference number: 6 (lower is better)
Translates to: FSPRPWFSIFLG*SSQSCPAGSPV
Trigger: CACAGGAGAGCCGGCAGGACATGATTGTGAGGACCACCCAAGAAAAATTGAAAACCAGGGCCGTGGAGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559713.1
CDS CAA 72 bp TCCCATTCTCTCCACGGCCCTGGTTTTCAATTTTTCTaGGGTGGTCCTCACAATCATGTCCTGCCGGCTCTC +
Preference number: 6 (lower is better)
Translates to: SHSLHGPGFQFF*GGPHNHVLPAL
Trigger: GAGAGCCGGCAGGACATGATTGTGAGGACCACCCAAGAAAAATTGAAAACCAGGGCCGTGGAGAGAATGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559713.1
CDS CAA 90 bp ACCTTCTCTGGCACTGAGAGCTCGAGAGCATGGTTCAGGGACTCTTaGGAGAGTGGCTGCCTGTCAGTCAGTGAGCTGGTTTTCAATTTT +
Preference number: 6 (lower is better)
Translates to: TFSGTESSRAWFRDS*ESGCLSVSELVFNF
Trigger: AAAATTGAAAACCAGCTCACTGACTGACAGGCAGCCACTCTCCAAAGAGTCCCTGAACCATGCTCTCGAGCTCTCAGTGCCAGAGAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258873.9
ENST00000558130.1
CDS GCA 72 bp GTTTGGTTCCTTACTAAGCACATGTACTATGCCGAGTaGCTTGTGTTGGCTTCTCCCATTCTCTCCACGGCC +
Preference number: 6 (lower is better)
Translates to: VWFLTKHMYYAE*LVLASPILSTA
Trigger: GGCCGTGGAGAGAATGGGAGAAGCCAACACAAGGCACTCGGCATAGTACATGTGCTTAGTAAGGAACCAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559713.1
CDS CCA 72 bp TGCCTGTCAGTCAGTGAGCTGGTTTTCAATTTTTCTTaGGTGGTCCTCACAATCATGTCCTGCCGGCTCTCC +
Preference number: 6 (lower is better)
Translates to: CLSVSELVFNFS*VVLTIMSCRLS
Trigger: GGAGAGCCGGCAGGACATGATTGTGAGGACCACCCAAGAAAAATTGAAAACCAGCTCACTGACTGACAGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258873.9
ENST00000558130.1
CDS CAA 72 bp TGTTTCCAGATCTATGTGTCCCGAATTGGTGGGTTCTaGGTCTCACTGACTTCAAGACTGACGCCGCAGACC +
Preference number: 6 (lower is better)
Translates to: CFQIYVSRIGGF*VSLTSRLTPQT
Trigger: GGTCTGCGGCGTCAGTCTTGAAGTCAGTGAGACCAAGAACCCACCAATTCGGGACACATAGATCTGGAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560817.5
CDS CAA 72 bp CTTACTAAGCACATGTACTATGCCGAGTGCCTTGTGTaGGCTTCTCCCATTCTCTCCACGGCCCTGGTTTTC +
Preference number: 6 (lower is better)
Translates to: LTKHMYYAECLV*ASPILSTALVF
Trigger: GAAAACCAGGGCCGTGGAGAGAATGGGAGAAGCCAACACAAGGCACTCGGCATAGTACATGTGCTTAGTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559713.1
CDS CCA 72 bp TGTCAGTCAGTGAGCTGGTTTTCAATTTTTCTTGGGTaGTCCTCACAATCATGTCCTGCCGGCTCTCCTGTG +
Preference number: 6 (lower is better)
Translates to: CQSVSWFSIFLG*SSQSCPAGSPV
Trigger: CACAGGAGAGCCGGCAGGACATGATTGTGAGGACCACCCAAGAAAAATTGAAAACCAGCTCACTGACTGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258873.9
ENST00000558130.1
CDS CCA 72 bp TGGCAACTGTTTCCAGATCTATGTGTCCCGAATTGGTaGGTTCTTGGTCTCACTGACTTCAAGACTGACGCC +
Preference number: 6 (lower is better)
Translates to: WQLFPDLCVPNW*VLGLTDFKTDA
Trigger: GGCGTCAGTCTTGAAGTCAGTGAGACCAAGAACCCACCAATTCGGGACACATAGATCTGGAAACAGTTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560817.5
CDS CCA 72 bp AGCCATCTGCTTAAGAACCTATGTGTCCCGAATTGGTaGGTTCTTGGTCTCACTGACTTCAAGACTGACGCC +
Preference number: 6 (lower is better)
Translates to: SHLLKNLCVPNW*VLGLTDFKTDA
Trigger: GGCGTCAGTCTTGAAGTCAGTGAGACCAAGAACCCACCAATTCGGGACACATAGGTTCTTAAGCAGATGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558793.1
CDS CCA 72 bp GGCAGCCATCTGCTTAAGAACCTATGTGTCCCGAATTaGTGGGTTCTTGGTCTCACTGACTTCAAGACTGAC +
Preference number: 6 (lower is better)
Translates to: GSHLLKNLCVPN*WVLGLTDFKTD
Trigger: GTCAGTCTTGAAGTCAGTGAGACCAAGAACCCACCAATTCGGGACACATAGGTTCTTAAGCAGATGGCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558793.1
CDS GCA 72 bp TCGAGAGCATGGTTCAGGGACTCTTTGGAGAGTGGCTaGCTGTCAGTCAGTGAGCTGGTTTTCAATTTTTCT +
Preference number: 6 (lower is better)
Translates to: SRAWFRDSLESG*LSVSELVFNFS
Trigger: AGAAAAATTGAAAACCAGCTCACTGACTGACAGGCAGCCACTCTCCAAAGAGTCCCTGAACCATGCTCTCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258873.9
ENST00000558130.1
CDS CAA 90 bp GTTTGGTTTGGTTCCTTACTAAGCACATGTACTATGCCGAGTGCCTaGTGTTGGCTTCTCCCATTCTCTCCACGGCCCTGGTTTTCAATT +
Preference number: 6 (lower is better)
Translates to: VWFGSLLSTCTMPSA*CWLLPFSPRPWFSI
Trigger: AATTGAAAACCAGGGCCGTGGAGAGAATGGGAGAAGCCAACACAAGGCACTCGGCATAGTACATGTGCTTAGTAAGGAACCAAACCAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559713.1
CDS CCA 72 bp ATGTGGCAACTGTTTCCAGATCTATGTGTCCCGAATTaGTGGGTTCTTGGTCTCACTGACTTCAAGACTGAC +
Preference number: 6 (lower is better)
Translates to: MWQLFPDLCVPN*WVLGLTDFKTD
Trigger: GTCAGTCTTGAAGTCAGTGAGACCAAGAACCCACCAATTCGGGACACATAGATCTGGAAACAGTTGCCACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560817.5
CDS GCA 72 bp ACGACTGCCTTTAGATGTGGCAACTGTTTCCAGATCTaGATTGACAGGAAAAATAGATCAGGTTTCAGTAAG +
Preference number: 6 (lower is better)
Translates to: TTAFRCGNCFQI*IDRKNRSGFSK
Trigger: CTTACTGAAACCTGATCTATTTTTCCTGTCAATGCAGATCTGGAAACAGTTGCCACATCTAAAGGCAGTCGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558728.1