RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ACRBP (Homo sapiens)

Ensembl gene IDs: ENSG00000111644

Ensembl transcript IDs: ENST00000229243.7, ENST00000414226.6, ENST00000535884.5, ENST00000536350.5, ENST00000538524.1, ENST00000540513.1, ENST00000542357.1, ENST00000544352.1, ENST00000546114.1

Found 212 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCCTGCCTGTGCTCCACTCCTTGCTCCTGCTTGTGCTCTGGCGCTTaGTCCTGGCCTCCCAGGGACAAGGAGGATTGTAGGAGCTCTTCC +
Preference number: 1 (lower is better)
Translates to: SCLCSTPCSCLCSGA*SWPPRDKEDCRSSS
Trigger: GGAAGAGCTCCTACAATCCTCCTTGTCCCTGGGAGGCCAGGAGCAAGCGCCAGAGCACAAGCAGGAGCAAGGAGTGGAGCACAGGCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535884.5
3UTR GCA 90 bp TTCTGCCCCTCTTCCTGCTTGTGTTCTTGTGTCGGCTCCTGCCTGTaGTCCACTCCTTGCTCCTGCTTGTGCTCTGGCGCTTGCTCCTGG +
Preference number: 1 (lower is better)
Translates to: FCPSSCLCSCVGSCL*STPCSCLCSGACSW
Trigger: CCAGGAGCAAGCGCCAGAGCACAAGCAGGAGCAAGGAGTGGAGCACAGGCAGGAGCCGACACAAGAACACAAGCAGGAAGAGGGGCAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535884.5
3UTR CCA 90 bp CTGTGCTCCACTCCTTGCTCCTGCTTGTGCTCTGGCGCTTGCTCCTaGCCTCCCAGGGACAAGGAGGATTGTAGGAGCTCTTCCACGTTG +
Preference number: 1 (lower is better)
Translates to: LCSTPCSCLCSGACS*PPRDKEDCRSSSTL
Trigger: CAACGTGGAAGAGCTCCTACAATCCTCCTTGTCCCTGGGAGGCCAGGAGCAAGCGCCAGAGCACAAGCAGGAGCAAGGAGTGGAGCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535884.5
3UTR TCA 90 bp CTCCCAGGGACAAGGAGGATTGTAGGAGCTCTTCCACGTTGTTGCTaGGCCTCTCAGGCCAGGGCTGGAAGGTCTGGCGTTCTGTCACTG +
Preference number: 1 (lower is better)
Translates to: LPGTRRIVGALPRCC*ASQARAGRSGVLSL
Trigger: CAGTGACAGAACGCCAGACCTTCCAGCCCTGGCCTGAGAGGCTCAGCAACAACGTGGAAGAGCTCCTACAATCCTCCTTGTCCCTGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535884.5
3UTR CCA 90 bp TGTAGGAGCTCTTCCACGTTGTTGCTGAGCCTCTCAGGCCAGGGCTaGAAGGTCTGGCGTTCTGTCACTGTGAAGTGGGGTGAGATGGGG +
Preference number: 1 (lower is better)
Translates to: CRSSSTLLLSLSGQG*KVWRSVTVKWGEMG
Trigger: CCCCATCTCACCCCACTTCACAGTGACAGAACGCCAGACCTTCCAGCCCTGGCCTGAGAGGCTCAGCAACAACGTGGAAGAGCTCCTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535884.5
3UTR-3UTR CCA 90 bp AGGGCGCAGCTCCCACCGTGGCCCTCTCTGGGACTGTTGCTCCAACCCAAGGAAAGAACGTGGGCAGGTTaGGCTGGGGTGTGGGCAGAA +
Preference number: 2 (lower is better)
Translates to: RAQLPPWPSLGLLLQPKERTWAG*AGVWAE
Trigger: TTCTGCCCACACCCCAGCCCAACCTGCCCACGTTCT...TTCCTTGGGTTGGAGCAACAGTCCCAGAGAGGGCCACGGTGGGAGCTGCGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229243.7
3UTR-3UTR CCA 90 bp CGGCTCCTGCCTGTGCTCCACTCCTTGCTCCTGCTTGTGCTCTGGCGCTTGCTCCTCTCAGGCCAGGGCTaGAAGGTCTGGCGTTCTGTC +
Preference number: 2 (lower is better)
Translates to: RLLPVLHSLLLLVLWRLLLSGQG*KVWRSV
Trigger: GACAGAACGCCAGACCTTCCAGCCCTGGCCTGAGAG...GAGCAAGCGCCAGAGCACAAGCAGGAGCAAGGAGTGGAGCACAGGCAGGAGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535884.5
3UTR-3UTR TCA 90 bp CGGCTCCTGCCTGTGCTCCACTCCTTGCTCCTGCTTGTGCTCTGGCGCTTGCTCCACTGTGAAGTGGGGTaGGATGGGGGAGGTCATCGT +
Preference number: 2 (lower is better)
Translates to: RLLPVLHSLLLLVLWRLLHCEVG*DGGGHR
Trigger: ACGATGACCTCCCCCATCTCACCCCACTTCACAGTG...GAGCAAGCGCCAGAGCACAAGCAGGAGCAAGGAGTGGAGCACAGGCAGGAGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535884.5
3UTR CAA 90 bp TGGCCTCCCAGGGACAAGGAGGATTGTAGGAGCTCTTCCACGTTGTaGCTGAGCCTCTCAGGCCAGGGCTGGAAGGTCTGGCGTTCTGTC +
Preference number: 2 (lower is better)
Translates to: WPPRDKEDCRSSSTL*LSLSGQGWKVWRSV
Trigger: GACAGAACGCCAGACCTTCCAGCCCTGGCCTGAGAGGCTCAGCAACAACGTGGAAGAGCTCCTACAATCCTCCTTGTCCCTGGGAGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535884.5
3UTR CAA 90 bp TCCTGGCCTCCCAGGGACAAGGAGGATTGTAGGAGCTCTTCCACGTaGTTGCTGAGCCTCTCAGGCCAGGGCTGGAAGGTCTGGCGTTCT +
Preference number: 2 (lower is better)
Translates to: SWPPRDKEDCRSSST*LLSLSGQGWKVWRS
Trigger: AGAACGCCAGACCTTCCAGCCCTGGCCTGAGAGGCTCAGCAACAACGTGGAAGAGCTCCTACAATCCTCCTTGTCCCTGGGAGGCCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535884.5
3UTR-3UTR TCA 90 bp TTCCTGCTTGTGTTCTTGTGTCGGCTCCTGCCTGTGCTCCACTCCTTGCTCCTGGGCGTTCTGTCACTGTaGAGTGGGGTGAGATGGGGG +
Preference number: 2 (lower is better)
Translates to: FLLVFLCRLLPVLHSLLLGVLSL*SGVRWG
Trigger: CCCCCATCTCACCCCACTTCACAGTGACAGAACGCC...CAGGAGCAAGGAGTGGAGCACAGGCAGGAGCCGACACAAGAACACAAGCAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535884.5
3UTR-3UTR CCA 90 bp AGGAGCTCTTCCACGTTGTTGCTGAGCCTCTCAGGCCAGGGCTGGAAGGTCTGGTCTGTCACTGTGAAGTaGGGTGAGATGGGGGAGGTC +
Preference number: 2 (lower is better)
Translates to: RSSSTLLLSLSGQGWKVWSVTVK*GEMGEV
Trigger: GACCTCCCCCATCTCACCCCACTTCACAGTGACAGA...CCAGACCTTCCAGCCCTGGCCTGAGAGGCTCAGCAACAACGTGGAAGAGCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535884.5
3UTR-3UTR CCA 90 bp GTTGCTCCAACCCAAGGAAATGTGAGTAGGGGCCGAGTAACAGACCCAGAAGGGGTGGGCAGGTTGGGCTaGGGTGTGGGCAGAATAGAC +
Preference number: 2 (lower is better)
Translates to: VAPTQGNVSRGRVTDPEGVGRLG*GVGRID
Trigger: GTCTATTCTGCCCACACCCCAGCCCAACCTGCCCAC...CCCTTCTGGGTCTGTTACTCGGCCCCTACTCACATTTCCTTGGGTTGGAGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229243.7
3UTR-3UTR CCA 90 bp CTTCCTGCTTGTGTTCTTGTGTCGGCTCCTGCCTGTGCTCCACTCCTTGCTCCTGGGAGGTCATCGTGGTaGGTGAGACTTCAGCTGAAG +
Preference number: 2 (lower is better)
Translates to: LPACVLVSAPACAPLLAPGRSSW*VRLQLK
Trigger: CTTCAGCTGAAGTCTCACCCACCACGATGACCTCCC...AGGAGCAAGGAGTGGAGCACAGGCAGGAGCCGACACAAGAACACAAGCAGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535884.5
3UTR-3UTR GCA 90 bp AGGAGTAGACTCTACTTCTCGTACCCGGGGAGCAAAAGAGGAAGGGTTAGAAGAGTCGGCTCCTGCCTGTaGTCCACTCCTTGCTCCTGC +
Preference number: 2 (lower is better)
Translates to: RSRLYFSYPGSKRGRVRRVGSCL*STPCSC
Trigger: GCAGGAGCAAGGAGTGGAGCACAGGCAGGAGCCGAC...TCTTCTAACCCTTCCTCTTTTGCTCCCCGGGTACGAGAAGTAGAGTCTACTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535884.5
3UTR-3UTR GCA 90 bp ATAGGAGTAGACTCTACTTCTCGTACCCGGGGAGCAAAAGAGGAAGGGTTAGAATTGTGCTCTGGCGCTTaGTCCTGGCCTCCCAGGGAC +
Preference number: 2 (lower is better)
Translates to: IGVDSTSRTRGAKEEGLELCSGA*SWPPRD
Trigger: GTCCCTGGGAGGCCAGGAGCAAGCGCCAGAGCACAA...TTCTAACCCTTCCTCTTTTGCTCCCCGGGTACGAGAAGTAGAGTCTACTCCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535884.5
3UTR-3UTR CCA 90 bp ATAGGAGTAGACTCTACTTCTCGTACCCGGGGAGCAAAAGAGGAAGGGTTAGAATGGGGGAGGTCATCGTaGTGGGTGAGACTTCAGCTG +
Preference number: 2 (lower is better)
Translates to: IGVDSTSRTRGAKEEGLEWGRSS*WVRLQL
Trigger: CAGCTGAAGTCTCACCCACCACGATGACCTCCCCCA...TTCTAACCCTTCCTCTTTTGCTCCCCGGGTACGAGAAGTAGAGTCTACTCCTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000535884.5
3UTR-3UTR GCA 90 bp ATAGGAGTAGACTCTACTTCTCGTACCCGGGGAGCAAAAGAGGAAGGGTTAGAATGCTCTTCCTGTTTCTaGCCCTCTTCCTGCTTGTGT +
Preference number: 2 (lower is better)
Translates to: IGVDSTSRTRGAKEEGLECSSCF*PSSCLC
Trigger: ACACAAGCAGGAAGAGGGGCAGAAACAGGAAGAGCA...TTCTAACCCTTCCTCTTTTGCTCCCCGGGTACGAGAAGTAGAGTCTACTCCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535884.5
3UTR-3UTR CAA 90 bp CTCCTGCCTGTGCTCCACTCCTTGCTCCTGCTTGTGCTCTGGCGCTTGCTCCTGAGCTCTTCCACGTTGTaGCTGAGCCTCTCAGGCCAG +
Preference number: 3 (lower is better)
Translates to: LLPVLHSLLLLVLWRLLLSSSTL*LSLSGQ
Trigger: CTGGCCTGAGAGGCTCAGCAACAACGTGGAAGAGCT...CAGGAGCAAGCGCCAGAGCACAAGCAGGAGCAAGGAGTGGAGCACAGGCAGGAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535884.5
3UTR-3UTR CAA 90 bp CTTCCTGCTTGTGTTCTTGTGTCGGCTCCTGCCTGTGCTCCACTCCTTGCTCCTCTTGTGCTCTGGCGCTaGCTCCTGGCCTCCCAGGGA +
Preference number: 3 (lower is better)
Translates to: LPACVLVSAPACAPLLAPLVLWR*LLASQG
Trigger: TCCCTGGGAGGCCAGGAGCAAGCGCCAGAGCACAAG...AGGAGCAAGGAGTGGAGCACAGGCAGGAGCCGACACAAGAACACAAGCAGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535884.5
3UTR CCA 72 bp TTGTTGCTGAGCCTCTCAGGCCAGGGCTGGAAGGTCTaGCGTTCTGTCACTGTGAAGTGGGGTGAGATGGGG +
Preference number: 3 (lower is better)
Translates to: LLLSLSGQGWKV*RSVTVKWGEMG
Trigger: CCCCATCTCACCCCACTTCACAGTGACAGAACGCCAGACCTTCCAGCCCTGGCCTGAGAGGCTCAGCAACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535884.5
3UTR GCA 72 bp TCTTCCTGCTTGTGTTCTTGTGTCGGCTCCTGCCTGTaGTCCACTCCTTGCTCCTGCTTGTGCTCTGGCGCT +
Preference number: 3 (lower is better)
Translates to: SSCLCSCVGSCL*STPCSCLCSGA
Trigger: AGCGCCAGAGCACAAGCAGGAGCAAGGAGTGGAGCACAGGCAGGAGCCGACACAAGAACACAAGCAGGAAGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535884.5
3UTR CCA 72 bp TCTTCCACGTTGTTGCTGAGCCTCTCAGGCCAGGGCTaGAAGGTCTGGCGTTCTGTCACTGTGAAGTGGGGT +
Preference number: 3 (lower is better)
Translates to: SSTLLLSLSGQG*KVWRSVTVKWG
Trigger: ACCCCACTTCACAGTGACAGAACGCCAGACCTTCCAGCCCTGGCCTGAGAGGCTCAGCAACAACGTGGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535884.5
3UTR TCA 72 bp ACAAGGAGGATTGTAGGAGCTCTTCCACGTTGTTGCTaGGCCTCTCAGGCCAGGGCTGGAAGGTCTGGCGTT +
Preference number: 3 (lower is better)
Translates to: TRRIVGALPRCC*ASQARAGRSGV
Trigger: AACGCCAGACCTTCCAGCCCTGGCCTGAGAGGCTCAGCAACAACGTGGAAGAGCTCCTACAATCCTCCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535884.5
CDS-3UTR CCA 90 bp AGGGCGCAGCTCCCACCGTGGCCCTCTCTGGGACTGTTGCTCCAACCCAAGGAATCCGCCCGCGTCCCGTaGACACAAGCCGCCTCTAAC +
Preference number: 4 (lower is better)
Translates to: RAQLPPWPSLGLLLQPKESARVP*TQAASN
Trigger: GTTAGAGGCGGCTTGTGTCCACGGGACGCGGGCGGA...TTCCTTGGGTTGGAGCAACAGTCCCAGAGAGGGCCACGGTGGGAGCTGCGCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR GCA 90 bp AGGGCGCAGCTCCCACCGTGGCCCTCTCTGGGACTGTTGCTCCAACCCAAGGAAGTCGGCTCCTGCCTGTaGTCCACTCCTTGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: RAQLPPWPSLGLLLQPKEVGSCL*STPCSC
Trigger: GCAGGAGCAAGGAGTGGAGCACAGGCAGGAGCCGAC...TTCCTTGGGTTGGAGCAACAGTCCCAGAGAGGGCCACGGTGGGAGCTGCGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR CCA 90 bp AGGGCGCAGCTCCCACCGTGGCCCTCTCTGGGACTGTTGCTCCAACCCAAGGAAGTTGCCGCTGCAGGCTaGCCTCTGAGTGGCACTGCT +
Preference number: 4 (lower is better)
Translates to: RAQLPPWPSLGLLLQPKEVAAAG*PLSGTA
Trigger: AGCAGTGCCACTCAGAGGCCAGCCTGCAGCGGCAAC...TTCCTTGGGTTGGAGCAACAGTCCCAGAGAGGGCCACGGTGGGAGCTGCGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR GCA 90 bp GGCCAGGGCTGGAAGGTCTGGCGTTCTGTCACTGTGAAGTGGGGTGAGATGGGGAGTCGAATCCTGGGCTaGGGCAGGTGCCAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: GQGWKVWRSVTVKWGEMGSRILG*GRCQRQ
Trigger: CTGCCTCTGGCACCTGCCGCAGCCCAGGATTCGACT...CCCCATCTCACCCCACTTCACAGTGACAGAACGCCAGACCTTCCAGCCCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535884.5
CDS-3UTR CCA 90 bp AGGAGCTCTTCCACGTTGTTGCTGAGCCTCTCAGGCCAGGGCTGGAAGGTCTGGCGGCTGGCTTCCTCATaGCCGGAGAAGATCCGCCCG +
Preference number: 4 (lower is better)
Translates to: RSSSTLLLSLSGQGWKVWRLASS*PEKIRP
Trigger: CGGGCGGATCTTCTCCGGCCATGAGGAAGCCAGCCG...CCAGACCTTCCAGCCCTGGCCTGAGAGGCTCAGCAACAACGTGGAAGAGCTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535884.5
CDS-3UTR CCA 90 bp AGGGCGCAGCTCCCACCGTGGCCCTCTCTGGGACTGTTGCTCCAACCCAAGGAATCTGGGGACCCTACCTaGTTGCCGATGGACAGGCTC +
Preference number: 4 (lower is better)
Translates to: RAQLPPWPSLGLLLQPKESGDPT*LPMDRL
Trigger: GAGCCTGTCCATCGGCAACCAGGTAGGGTCCCCAGA...TTCCTTGGGTTGGAGCAACAGTCCCAGAGAGGGCCACGGTGGGAGCTGCGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR CCA 90 bp GGCCAGGGCTGGAAGGTCTGGCGTTCTGTCACTGTGAAGTGGGGTGAGATGGGGAAGGAAGCCAGCGGCTaGCTTCCTCATGGCCGGAGA +
Preference number: 4 (lower is better)
Translates to: GQGWKVWRSVTVKWGEMGKEASG*LPHGRR
Trigger: TCTCCGGCCATGAGGAAGCCAGCCGCTGGCTTCCTT...CCCCATCTCACCCCACTTCACAGTGACAGAACGCCAGACCTTCCAGCCCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535884.5
CDS-3UTR CCA 90 bp TCATCTTTTAAGGAGGGCGCAGCTCCCACCGTGGCCCTCTCTGGGACTGTTGCTGGATTCCGGCAGCCGTaGGTTGCACGGAGACGGCAG +
Preference number: 4 (lower is better)
Translates to: SSFKEGAAPTVALSGTVAGFRQP*VARRRQ
Trigger: CTGCCGTCTCCGTGCAACCCACGGCTGCCGGAATCC...AGCAACAGTCCCAGAGAGGGCCACGGTGGGAGCTGCGCCCTCCTTAAAAGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR CCA 90 bp AGGGCGCAGCTCCCACCGTGGCCCTCTCTGGGACTGTTGCTCCAACCCAAGGAACTACCTGGTTGCCGATaGACAGGCTCTGGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: RAQLPPWPSLGLLLQPKELPGCR*TGSGRQ
Trigger: TTGCCTCCCAGAGCCTGTCCATCGGCAACCAGGTAG...TTCCTTGGGTTGGAGCAACAGTCCCAGAGAGGGCCACGGTGGGAGCTGCGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR TCA 90 bp AGTCATCTTTTAAGGAGGGCGCAGCTCCCACCGTGGCCCTCTCTGGGACTGTTGCAGCACCTTCAGGAGTaGGGGAAGGAAGCCAGCGGC +
Preference number: 4 (lower is better)
Translates to: SHLLRRAQLPPWPSLGLLQHLQE*GKEASG
Trigger: GCCGCTGGCTTCCTTCCCTCACTCCTGAAGGTGCTG...CAACAGTCCCAGAGAGGGCCACGGTGGGAGCTGCGCCCTCCTTAAAAGATGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR TCA 90 bp TTCCTGCTTGTGTTCTTGTGTCGGCTCCTGCCTGTGCTCCACTCCTTGCTCCTGCCTGGAGTGGAGGCCTaGGTCGAATCCTGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: FLLVFLCRLLPVLHSLLLPGVEA*VESWAA
Trigger: CGCAGCCCAGGATTCGACTCAGGCCTCCACTCCAGG...CAGGAGCAAGGAGTGGAGCACAGGCAGGAGCCGACACAAGAACACAAGCAGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535884.5
CDS-3UTR TCA 90 bp AGGGCGCAGCTCCCACCGTGGCCCTCTCTGGGACTGTTGCTCCAACCCAAGGAACCAGAAGGGGCAGCCTaGAAGCAATGGGGTCTCAAA +
Preference number: 4 (lower is better)
Translates to: RAQLPPWPSLGLLLQPKEPEGAA*KQWGLK
Trigger: TTTGAGACCCCATTGCTTTCAGGCTGCCCCTTCTGG...TTCCTTGGGTTGGAGCAACAGTCCCAGAGAGGGCCACGGTGGGAGCTGCGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR GCA 90 bp TCATCTTTTAAGGAGGGCGCAGCTCCCACCGTGGCCCTCTCTGGGACTGTTGCTTTGTGCTCTGGCGCTTaGTCCTGGCCTCCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: SSFKEGAAPTVALSGTVALCSGA*SWPPRD
Trigger: GTCCCTGGGAGGCCAGGAGCAAGCGCCAGAGCACAA...AGCAACAGTCCCAGAGAGGGCCACGGTGGGAGCTGCGCCCTCCTTAAAAGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR CCA 90 bp CTGTTTCTGCCCCTCTTCCTGCTTGTGTTCTTGTGTCGGCTCCTGCCTGTGCTCGGATTCCGGCAGCCGTaGGTTGCACGGAGACGGCAG +
Preference number: 4 (lower is better)
Translates to: LFLPLFLLVFLCRLLPVLGFRQP*VARRRQ
Trigger: CTGCCGTCTCCGTGCAACCCACGGCTGCCGGAATCC...GAGCACAGGCAGGAGCCGACACAAGAACACAAGCAGGAAGAGGGGCAGAAACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535884.5
CDS-3UTR CCA 90 bp AGGGCGCAGCTCCCACCGTGGCCCTCTCTGGGACTGTTGCTCCAACCCAAGGAAGGGAGGTCATCGTGGTaGGTGAGACTTCAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: RAQLPPWPSLGLLLQPKEGRSSW*VRLQLK
Trigger: CTTCAGCTGAAGTCTCACCCACCACGATGACCTCCC...TTCCTTGGGTTGGAGCAACAGTCCCAGAGAGGGCCACGGTGGGAGCTGCGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR CCA 90 bp AGGGCGCAGCTCCCACCGTGGCCCTCTCTGGGACTGTTGCTCCAACCCAAGGAACCAGCTCATCCGAACTaGCCTAGAGTCAAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: RAQLPPWPSLGLLLQPKEPAHPN*PRVKVL
Trigger: CAGCACCTTGACTCTAGGCCAGTTCGGATGAGCTGG...TTCCTTGGGTTGGAGCAACAGTCCCAGAGAGGGCCACGGTGGGAGCTGCGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR TCA 90 bp GGGACTGTTGCTCCAACCCAAGGAAATGTGAGTAGGGGCCGAGTAACAGACCCACCTGGAGTGGAGGCCTaGGTCGAATCCTGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: GTVAPTQGNVSRGRVTDPPGVEA*VESWAA
Trigger: CGCAGCCCAGGATTCGACTCAGGCCTCCACTCCAGG...TGGGTCTGTTACTCGGCCCCTACTCACATTTCCTTGGGTTGGAGCAACAGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR TCA 90 bp CTGTTTCTGCCCCTCTTCCTGCTTGTGTTCTTGTGTCGGCTCCTGCCTGTGCTCGAGTCTGTCTGCAGCTaGGACACAGCCTCCCGTCCC +
Preference number: 4 (lower is better)
Translates to: LFLPLFLLVFLCRLLPVLESVCS*DTASRP
Trigger: GGGACGGGAGGCTGTGTCTCAGCTGCAGACAGACTC...GAGCACAGGCAGGAGCCGACACAAGAACACAAGCAGGAAGAGGGGCAGAAACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535884.5
CDS-3UTR GCA 90 bp GTTGCTCCAACCCAAGGAAATGTGAGTAGGGGCCGAGTAACAGACCCAGAAGGGCCGGCAGCCGTGGGTTaGACGGAGACGGCAGGTAGT +
Preference number: 4 (lower is better)
Translates to: VAPTQGNVSRGRVTDPEGPAAVG*TETAGS
Trigger: ACTACCTGCCGTCTCCGTGCAACCCACGGCTGCCGG...CCCTTCTGGGTCTGTTACTCGGCCCCTACTCACATTTCCTTGGGTTGGAGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR GCA 90 bp AAGGAGGATTGTAGGAGCTCTTCCACGTTGTTGCTGAGCCTCTCAGGCCAGGGCTTGTGCTCTGGCGCTTaGTCCTGGCCTCCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: KEDCRSSSTLLLSLSGQGLCSGA*SWPPRD
Trigger: GTCCCTGGGAGGCCAGGAGCAAGCGCCAGAGCACAA...GCCCTGGCCTGAGAGGCTCAGCAACAACGTGGAAGAGCTCCTACAATCCTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535884.5
CDS-3UTR GCA 90 bp AGGGCGCAGCTCCCACCGTGGCCCTCTCTGGGACTGTTGCTCCAACCCAAGGAATTCTGCCCCTCTTCCTaGTTGTGTTCTTGTGTCGGC +
Preference number: 4 (lower is better)
Translates to: RAQLPPWPSLGLLLQPKEFCPSS*LCSCVG
Trigger: GCCGACACAAGAACACAAGCAGGAAGAGGGGCAGAA...TTCCTTGGGTTGGAGCAACAGTCCCAGAGAGGGCCACGGTGGGAGCTGCGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR CCA 90 bp GGGACTGTTGCTCCAACCCAAGGAAATGTGAGTAGGGGCCGAGTAACAGACCCACGGCTGGCTTCCTCATaGCCGGAGAAGATCCGCCCG +
Preference number: 4 (lower is better)
Translates to: GTVAPTQGNVSRGRVTDPRLASS*PEKIRP
Trigger: CGGGCGGATCTTCTCCGGCCATGAGGAAGCCAGCCG...TGGGTCTGTTACTCGGCCCCTACTCACATTTCCTTGGGTTGGAGCAACAGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR CCA 90 bp GGGACTGTTGCTCCAACCCAAGGAAATGTGAGTAGGGGCCGAGTAACAGACCCACCAGCTGGACGAGTGTaGGATTCCGGCAGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: GTVAPTQGNVSRGRVTDPPAGRV*DSGSRG
Trigger: CCCACGGCTGCCGGAATCCCACACTCGTCCAGCTGG...TGGGTCTGTTACTCGGCCCCTACTCACATTTCCTTGGGTTGGAGCAACAGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR CCA 90 bp GACAAGGAGGATTGTAGGAGCTCTTCCACGTTGTTGCTGAGCCTCTCAGGCCAGCCAGCTGGACGAGTGTaGGATTCCGGCAGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: DKEDCRSSSTLLLSLSGQPAGRV*DSGSRG
Trigger: CCCACGGCTGCCGGAATCCCACACTCGTCCAGCTGG...CTGGCCTGAGAGGCTCAGCAACAACGTGGAAGAGCTCCTACAATCCTCCTTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535884.5
CDS-3UTR CCA 90 bp CGGCTCCTGCCTGTGCTCCACTCCTTGCTCCTGCTTGTGCTCTGGCGCTTGCTCTCATATTGGTCCAGCTaGACGAGTGTGGGATTCCGG +
Preference number: 4 (lower is better)
Translates to: RLLPVLHSLLLLVLWRLLSYWSS*TSVGFR
Trigger: CCGGAATCCCACACTCGTCCAGCTGGACCAATATGA...GAGCAAGCGCCAGAGCACAAGCAGGAGCAAGGAGTGGAGCACAGGCAGGAGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535884.5
CDS-3UTR CCA 90 bp GGCCAGGGCTGGAAGGTCTGGCGTTCTGTCACTGTGAAGTGGGGTGAGATGGGGCAGGGCTGGAAGGTCTaGCGTTCTGTCACTGTGAAG +
Preference number: 4 (lower is better)
Translates to: GQGWKVWRSVTVKWGEMGQGWKV*RSVTVK
Trigger: CTTCACAGTGACAGAACGCCAGACCTTCCAGCCCTG...CCCCATCTCACCCCACTTCACAGTGACAGAACGCCAGACCTTCCAGCCCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535884.5
CDS-3UTR CCA 90 bp AGGGCGCAGCTCCCACCGTGGCCCTCTCTGGGACTGTTGCTCCAACCCAAGGAACACCAGAAGTCCATGTaGAGCCCACCGTACAAATCC +
Preference number: 4 (lower is better)
Translates to: RAQLPPWPSLGLLLQPKEHQKSM*SPPYKS
Trigger: GGATTTGTACGGTGGGCTCCACATGGACTTCTGGTG...TTCCTTGGGTTGGAGCAACAGTCCCAGAGAGGGCCACGGTGGGAGCTGCGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR CCA 90 bp AGTCATCTTTTAAGGAGGGCGCAGCTCCCACCGTGGCCCTCTCTGGGACTGTTGCACCGTGGCCCTCTCTaGGACTGTTGCTCCAACCCA +
Preference number: 4 (lower is better)
Translates to: SHLLRRAQLPPWPSLGLLHRGPL*DCCSNP
Trigger: TGGGTTGGAGCAACAGTCCCAGAGAGGGCCACGGTG...CAACAGTCCCAGAGAGGGCCACGGTGGGAGCTGCGCCCTCCTTAAAAGATGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229243.7
3UTR CAA 72 bp CCCAGGGACAAGGAGGATTGTAGGAGCTCTTCCACGTaGTTGCTGAGCCTCTCAGGCCAGGGCTGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: PRDKEDCRSSST*LLSLSGQGWKV
Trigger: GACCTTCCAGCCCTGGCCTGAGAGGCTCAGCAACAACGTGGAAGAGCTCCTACAATCCTCCTTGTCCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535884.5
CDS-3UTR TCA 90 bp GGGACTGTTGCTCCAACCCAAGGAAATGTGAGTAGGGGCCGAGTAACAGACCCAGAGTCTGTCTGCAGCTaGGACACAGCCTCCCGTCCC +
Preference number: 4 (lower is better)
Translates to: GTVAPTQGNVSRGRVTDPESVCS*DTASRP
Trigger: GGGACGGGAGGCTGTGTCTCAGCTGCAGACAGACTC...TGGGTCTGTTACTCGGCCCCTACTCACATTTCCTTGGGTTGGAGCAACAGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR GCA 90 bp GTTGCTCCAACCCAAGGAAATGTGAGTAGGGGCCGAGTAACAGACCCAGAAGGGAGTCGAATCCTGGGCTaGGGCAGGTGCCAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: VAPTQGNVSRGRVTDPEGSRILG*GRCQRQ
Trigger: CTGCCTCTGGCACCTGCCGCAGCCCAGGATTCGACT...CCCTTCTGGGTCTGTTACTCGGCCCCTACTCACATTTCCTTGGGTTGGAGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR GCA 90 bp CTGTTTCTGCCCCTCTTCCTGCTTGTGTTCTTGTGTCGGCTCCTGCCTGTGCTCCCTTGCTCCTGCTTGTaGTCTGGCGCTTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LFLPLFLLVFLCRLLPVLPCSCL*SGACSW
Trigger: CCAGGAGCAAGCGCCAGAGCACAAGCAGGAGCAAGG...GAGCACAGGCAGGAGCCGACACAAGAACACAAGCAGGAAGAGGGGCAGAAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535884.5
CDS-3UTR GCA 90 bp TCATCTTTTAAGGAGGGCGCAGCTCCCACCGTGGCCCTCTCTGGGACTGTTGCTTCCACTCCTTGCTCCTaGTTGTGCTCTGGCGCTTGC +
Preference number: 4 (lower is better)
Translates to: SSFKEGAAPTVALSGTVASTPCS*LCSGAC
Trigger: GCAAGCGCCAGAGCACAAGCAGGAGCAAGGAGTGGA...AGCAACAGTCCCAGAGAGGGCCACGGTGGGAGCTGCGCCCTCCTTAAAAGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR GCA 90 bp AGGGCGCAGCTCCCACCGTGGCCCTCTCTGGGACTGTTGCTCCAACCCAAGGAATGCTCTTCCTGTTTCTaGCCCTCTTCCTGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: RAQLPPWPSLGLLLQPKECSSCF*PSSCLC
Trigger: ACACAAGCAGGAAGAGGGGCAGAAACAGGAAGAGCA...TTCCTTGGGTTGGAGCAACAGTCCCAGAGAGGGCCACGGTGGGAGCTGCGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR GCA 90 bp GTTGCTCCAACCCAAGGAAATGTGAGTAGGGGCCGAGTAACAGACCCAGAAGGGGGGACCCTACCTGGTTaGCGATGGACAGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: VAPTQGNVSRGRVTDPEGGTLPG*RWTGSG
Trigger: CCCAGAGCCTGTCCATCGGCAACCAGGTAGGGTCCC...CCCTTCTGGGTCTGTTACTCGGCCCCTACTCACATTTCCTTGGGTTGGAGCAAC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR GCA 90 bp AGGGCGCAGCTCCCACCGTGGCCCTCTCTGGGACTGTTGCTCCAACCCAAGGAAGGGACACCTTCCGATTaGGGTTTCTCATCAGACACT +
Preference number: 4 (lower is better)
Translates to: RAQLPPWPSLGLLLQPKEGTPSD*GFSSDT
Trigger: AGTGTCTGATGAGAAACCGCAATCGGAAGGTGTCCC...TTCCTTGGGTTGGAGCAACAGTCCCAGAGAGGGCCACGGTGGGAGCTGCGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR CCA 90 bp GTGAAGTGGGGTGAGATGGGGGAGGTCATCGTGGTGGGTGAGACTTCAGCTGAAAGAGAGAGGGCTGCCTaGAGTGGAGGCCTGAGTCGA +
Preference number: 4 (lower is better)
Translates to: VKWGEMGEVIVVGETSAERERAA*SGGLSR
Trigger: TCGACTCAGGCCTCCACTCCAGGCAGCCCTCTCTCT...TTCAGCTGAAGTCTCACCCACCACGATGACCTCCCCCATCTCACCCCACTTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535884.5
CDS-3UTR CCA 90 bp AGGGCGCAGCTCCCACCGTGGCCCTCTCTGGGACTGTTGCTCCAACCCAAGGAATCGGGCACTAAGCCGTaGTTTTCATATTGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: RAQLPPWPSLGLLLQPKESGTKP*FSYWSS
Trigger: GCTGGACCAATATGAAAACCACGGCTTAGTGCCCGA...TTCCTTGGGTTGGAGCAACAGTCCCAGAGAGGGCCACGGTGGGAGCTGCGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR CCA 90 bp GGGACTGTTGCTCCAACCCAAGGAAATGTGAGTAGGGGCCGAGTAACAGACCCACTCCTGCTTGTGCTCTaGCGCTTGCTCCTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: GTVAPTQGNVSRGRVTDPLLLVL*RLLLAS
Trigger: GGAGGCCAGGAGCAAGCGCCAGAGCACAAGCAGGAG...TGGGTCTGTTACTCGGCCCCTACTCACATTTCCTTGGGTTGGAGCAACAGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR CCA 90 bp AGGGACAAGGAGGATTGTAGGAGCTCTTCCACGTTGTTGCTGAGCCTCTCAGGCCTCCTGCTTGTGCTCTaGCGCTTGCTCCTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: RDKEDCRSSSTLLLSLSGLLLVL*RLLLAS
Trigger: GGAGGCCAGGAGCAAGCGCCAGAGCACAAGCAGGAG...GCCTGAGAGGCTCAGCAACAACGTGGAAGAGCTCCTACAATCCTCCTTGTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535884.5
CDS-3UTR CCA 90 bp TCATCTTTTAAGGAGGGCGCAGCTCCCACCGTGGCCCTCTCTGGGACTGTTGCTAGGCTGGCCTCTGAGTaGCACTGCTCCAGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: SSFKEGAAPTVALSGTVARLASE*HCSSFK
Trigger: CTTGAAGCTGGAGCAGTGCCACTCAGAGGCCAGCCT...AGCAACAGTCCCAGAGAGGGCCACGGTGGGAGCTGCGCCCTCCTTAAAAGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR CCA 90 bp GGGACTGTTGCTCCAACCCAAGGAAATGTGAGTAGGGGCCGAGTAACAGACCCACCGATGGACAGGCTCTaGGAGGCAAGCAAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GTVAPTQGNVSRGRVTDPPMDRL*EASKGL
Trigger: CAGCCCCTTGCTTGCCTCCCAGAGCCTGTCCATCGG...TGGGTCTGTTACTCGGCCCCTACTCACATTTCCTTGGGTTGGAGCAACAGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR TCA 90 bp CGGCTCCTGCCTGTGCTCCACTCCTTGCTCCTGCTTGTGCTCTGGCGCTTGCTCCTTGAGAGTGTTAGGTaGGAGAATAGAGACTGGCTG +
Preference number: 4 (lower is better)
Translates to: RLLPVLHSLLLLVLWRLLLESVR*ENRDWL
Trigger: CAGCCAGTCTCTATTCTCTCACCTAACACTCTCAAG...GAGCAAGCGCCAGAGCACAAGCAGGAGCAAGGAGTGGAGCACAGGCAGGAGCCG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535884.5
CDS-3UTR TCA 90 bp CTTCCTGCTTGTGTTCTTGTGTCGGCTCCTGCCTGTGCTCCACTCCTTGCTCCTCACTGTGAAGTGGGGTaGGATGGGGGAGGTCATCGT +
Preference number: 4 (lower is better)
Translates to: LPACVLVSAPACAPLLAPHCEVG*DGGGHR
Trigger: ACGATGACCTCCCCCATCTCACCCCACTTCACAGTG...AGGAGCAAGGAGTGGAGCACAGGCAGGAGCCGACACAAGAACACAAGCAGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535884.5
CDS-3UTR TCA 90 bp GGGACTGTTGCTCCAACCCAAGGAAATGTGAGTAGGGGCCGAGTAACAGACCCAGGCGTTCTGTCACTGTaGAGTGGGGTGAGATGGGGG +
Preference number: 4 (lower is better)
Translates to: GTVAPTQGNVSRGRVTDPGVLSL*SGVRWG
Trigger: CCCCCATCTCACCCCACTTCACAGTGACAGAACGCC...TGGGTCTGTTACTCGGCCCCTACTCACATTTCCTTGGGTTGGAGCAACAGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR TCA 90 bp GACAAGGAGGATTGTAGGAGCTCTTCCACGTTGTTGCTGAGCCTCTCAGGCCAGGGCGTTCTGTCACTGTaGAGTGGGGTGAGATGGGGG +
Preference number: 4 (lower is better)
Translates to: DKEDCRSSSTLLLSLSGQGVLSL*SGVRWG
Trigger: CCCCCATCTCACCCCACTTCACAGTGACAGAACGCC...CTGGCCTGAGAGGCTCAGCAACAACGTGGAAGAGCTCCTACAATCCTCCTTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535884.5
CDS-3UTR TCA 90 bp GGGACTGTTGCTCCAACCCAAGGAAATGTGAGTAGGGGCCGAGTAACAGACCCACCCGTAAAAGCGGCCTaGTTCTGGGGACCCTACCTG +
Preference number: 4 (lower is better)
Translates to: GTVAPTQGNVSRGRVTDPPVKAA*FWGPYL
Trigger: CAGGTAGGGTCCCCAGAATCAGGCCGCTTTTACGGG...TGGGTCTGTTACTCGGCCCCTACTCACATTTCCTTGGGTTGGAGCAACAGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR TCA 90 bp AGGGCGCAGCTCCCACCGTGGCCCTCTCTGGGACTGTTGCTCCAACCCAAGGAAGACACTGCTGGCTTTTaGAGGAACAGTAGTTTGGGT +
Preference number: 4 (lower is better)
Translates to: RAQLPPWPSLGLLLQPKEDTAGF*RNSSLG
Trigger: ACCCAAACTACTGTTCCTTCAAAAGCCAGCAGTGTC...TTCCTTGGGTTGGAGCAACAGTCCCAGAGAGGGCCACGGTGGGAGCTGCGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR GCA 90 bp GGGACTGTTGCTCCAACCCAAGGAAATGTGAGTAGGGGCCGAGTAACAGACCCACCTTGCTCCTGCTTGTaGTCTGGCGCTTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: GTVAPTQGNVSRGRVTDPPCSCL*SGACSW
Trigger: CCAGGAGCAAGCGCCAGAGCACAAGCAGGAGCAAGG...TGGGTCTGTTACTCGGCCCCTACTCACATTTCCTTGGGTTGGAGCAACAGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR GCA 90 bp GTGAAGTGGGGTGAGATGGGGGAGGTCATCGTGGTGGGTGAGACTTCAGCTGAATCCACTCCTTGCTCCTaGTTGTGCTCTGGCGCTTGC +
Preference number: 4 (lower is better)
Translates to: VKWGEMGEVIVVGETSAESTPCS*LCSGAC
Trigger: GCAAGCGCCAGAGCACAAGCAGGAGCAAGGAGTGGA...TTCAGCTGAAGTCTCACCCACCACGATGACCTCCCCCATCTCACCCCACTTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535884.5
CDS-3UTR GCA 90 bp GTTGCTCCAACCCAAGGAAATGTGAGTAGGGGCCGAGTAACAGACCCAGAAGGGTCGCATTGTTGCCGCTaGAGGCTGGCCTCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: VAPTQGNVSRGRVTDPEGSHCCR*RLASEW
Trigger: CCACTCAGAGGCCAGCCTGCAGCGGCAACAATGCGA...CCCTTCTGGGTCTGTTACTCGGCCCCTACTCACATTTCCTTGGGTTGGAGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR GCA 90 bp TCATCTTTTAAGGAGGGCGCAGCTCCCACCGTGGCCCTCTCTGGGACTGTTGCTCAACGTCCTCACTTTTaGCAGGGCTCAGCGCACTGT +
Preference number: 4 (lower is better)
Translates to: SSFKEGAAPTVALSGTVAQRPHF*QGSAHC
Trigger: ACAGTGCGCTGAGCCCTGGCAAAAGTGAGGACGTTG...AGCAACAGTCCCAGAGAGGGCCACGGTGGGAGCTGCGCCCTCCTTAAAAGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR CCA 90 bp GGGACTGTTGCTCCAACCCAAGGAAATGTGAGTAGGGGCCGAGTAACAGACCCAAAGGAAGCCAGCGGCTaGCTTCCTCATGGCCGGAGA +
Preference number: 4 (lower is better)
Translates to: GTVAPTQGNVSRGRVTDPKEASG*LPHGRR
Trigger: TCTCCGGCCATGAGGAAGCCAGCCGCTGGCTTCCTT...TGGGTCTGTTACTCGGCCCCTACTCACATTTCCTTGGGTTGGAGCAACAGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR CCA 90 bp GTTGCTCCAACCCAAGGAAATGTGAGTAGGGGCCGAGTAACAGACCCAGAAGGGAGAGAGAGGGCTGCCTaGAGTGGAGGCCTGAGTCGA +
Preference number: 4 (lower is better)
Translates to: VAPTQGNVSRGRVTDPEGRERAA*SGGLSR
Trigger: TCGACTCAGGCCTCCACTCCAGGCAGCCCTCTCTCT...CCCTTCTGGGTCTGTTACTCGGCCCCTACTCACATTTCCTTGGGTTGGAGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR CCA 90 bp AGGGCGCAGCTCCCACCGTGGCCCTCTCTGGGACTGTTGCTCCAACCCAAGGAAAGAATAGAGACTGGCTaGGAACACAGGACTCTCTTG +
Preference number: 4 (lower is better)
Translates to: RAQLPPWPSLGLLLQPKERIETG*EHRTLL
Trigger: CAAGAGAGTCCTGTGTTCCCAGCCAGTCTCTATTCT...TTCCTTGGGTTGGAGCAACAGTCCCAGAGAGGGCCACGGTGGGAGCTGCGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR CCA 90 bp CTGTTTCTGCCCCTCTTCCTGCTTGTGTTCTTGTGTCGGCTCCTGCCTGTGCTCTGGGGGAGGTCATCGTaGTGGGTGAGACTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: LFLPLFLLVFLCRLLPVLWGRSS*WVRLQL
Trigger: CAGCTGAAGTCTCACCCACCACGATGACCTCCCCCA...GAGCACAGGCAGGAGCCGACACAAGAACACAAGCAGGAAGAGGGGCAGAAACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535884.5
CDS-3UTR CCA 90 bp AGTCATCTTTTAAGGAGGGCGCAGCTCCCACCGTGGCCCTCTCTGGGACTGTTGCAGGGCTGGAAGGTCTaGCGTTCTGTCACTGTGAAG +
Preference number: 4 (lower is better)
Translates to: SHLLRRAQLPPWPSLGLLQGWKV*RSVTVK
Trigger: CTTCACAGTGACAGAACGCCAGACCTTCCAGCCCTG...CAACAGTCCCAGAGAGGGCCACGGTGGGAGCTGCGCCCTCCTTAAAAGATGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR CCA 90 bp GGGACTGTTGCTCCAACCCAAGGAAATGTGAGTAGGGGCCGAGTAACAGACCCACTCTCAGGCCAGGGCTaGAAGGTCTGGCGTTCTGTC +
Preference number: 4 (lower is better)
Translates to: GTVAPTQGNVSRGRVTDPLSGQG*KVWRSV
Trigger: GACAGAACGCCAGACCTTCCAGCCCTGGCCTGAGAG...TGGGTCTGTTACTCGGCCCCTACTCACATTTCCTTGGGTTGGAGCAACAGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR CCA 90 bp GGGACTGTTGCTCCAACCCAAGGAAATGTGAGTAGGGGCCGAGTAACAGACCCAGTGGGCAGGTTGGGCTaGGGTGTGGGCAGAATAGAC +
Preference number: 4 (lower is better)
Translates to: GTVAPTQGNVSRGRVTDPVGRLG*GVGRID
Trigger: GTCTATTCTGCCCACACCCCAGCCCAACCTGCCCAC...TGGGTCTGTTACTCGGCCCCTACTCACATTTCCTTGGGTTGGAGCAACAGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229243.7
3UTR CAA 72 bp AGGGACAAGGAGGATTGTAGGAGCTCTTCCACGTTGTaGCTGAGCCTCTCAGGCCAGGGCTGGAAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: RDKEDCRSSSTL*LSLSGQGWKVW
Trigger: CCAGACCTTCCAGCCCTGGCCTGAGAGGCTCAGCAACAACGTGGAAGAGCTCCTACAATCCTCCTTGTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535884.5
CDS-3UTR TCA 90 bp GTTGCTCCAACCCAAGGAAATGTGAGTAGGGGCCGAGTAACAGACCCAGAAGGGCACTGTGAAGTGGGGTaGGATGGGGGAGGTCATCGT +
Preference number: 4 (lower is better)
Translates to: VAPTQGNVSRGRVTDPEGHCEVG*DGGGHR
Trigger: ACGATGACCTCCCCCATCTCACCCCACTTCACAGTG...CCCTTCTGGGTCTGTTACTCGGCCCCTACTCACATTTCCTTGGGTTGGAGCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR TCA 90 bp CGGCTCCTGCCTGTGCTCCACTCCTTGCTCCTGCTTGTGCTCTGGCGCTTGCTCGATAGAGATTCAGAGTaGAACTTGGGCTCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: RLLPVLHSLLLLVLWRLLDRDSE*NLGSES
Trigger: AGACTCAGAGCCCAAGTTTCACTCTGAATCTCTATC...GAGCAAGCGCCAGAGCACAAGCAGGAGCAAGGAGTGGAGCACAGGCAGGAGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535884.5
CDS-3UTR TCA 90 bp AGTCATCTTTTAAGGAGGGCGCAGCTCCCACCGTGGCCCTCTCTGGGACTGTTGTGGCTGTGGGGGTTATaGTGCAGGTATTCTCCACGA +
Preference number: 4 (lower is better)
Translates to: SHLLRRAQLPPWPSLGLLWLWGL*CRYSPR
Trigger: TCGTGGAGAATACCTGCATCATAACCCCCACAGCCA...CAACAGTCCCAGAGAGGGCCACGGTGGGAGCTGCGCCCTCCTTAAAAGATGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR TCA 90 bp GGGACTGTTGCTCCAACCCAAGGAAATGTGAGTAGGGGCCGAGTAACAGACCCAAGGCAAGCAAGGGGCTaGCAAAGGGAGTCTTGTGGG +
Preference number: 4 (lower is better)
Translates to: GTVAPTQGNVSRGRVTDPRQARG*QRESCG
Trigger: CCCACAAGACTCCCTTTGTCAGCCCCTTGCTTGCCT...TGGGTCTGTTACTCGGCCCCTACTCACATTTCCTTGGGTTGGAGCAACAGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR GCA 90 bp AGGAGCTCTTCCACGTTGTTGCTGAGCCTCTCAGGCCAGGGCTGGAAGGTCTGGTGCTCTTCCTGTTTCTaGCCCTCTTCCTGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: RSSSTLLLSLSGQGWKVWCSSCF*PSSCLC
Trigger: ACACAAGCAGGAAGAGGGGCAGAAACAGGAAGAGCA...CCAGACCTTCCAGCCCTGGCCTGAGAGGCTCAGCAACAACGTGGAAGAGCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535884.5
CDS-3UTR GCA 90 bp GGGACTGTTGCTCCAACCCAAGGAAATGTGAGTAGGGGCCGAGTAACAGACCCAGCCTCTGAGTGGCACTaGTCCAGCTTCAAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: GTVAPTQGNVSRGRVTDPASEWH*SSFKEQ
Trigger: CTGCTCCTTGAAGCTGGAGCAGTGCCACTCAGAGGC...TGGGTCTGTTACTCGGCCCCTACTCACATTTCCTTGGGTTGGAGCAACAGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR CCA 90 bp TCATCTTTTAAGGAGGGCGCAGCTCCCACCGTGGCCCTCTCTGGGACTGTTGCTTCATATTGGTCCAGCTaGACGAGTGTGGGATTCCGG +
Preference number: 4 (lower is better)
Translates to: SSFKEGAAPTVALSGTVASYWSS*TSVGFR
Trigger: CCGGAATCCCACACTCGTCCAGCTGGACCAATATGA...AGCAACAGTCCCAGAGAGGGCCACGGTGGGAGCTGCGCCCTCCTTAAAAGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR CCA 90 bp AAGGAGGATTGTAGGAGCTCTTCCACGTTGTTGCTGAGCCTCTCAGGCCAGGGCGGGAGGTCATCGTGGTaGGTGAGACTTCAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: KEDCRSSSTLLLSLSGQGGRSSW*VRLQLK
Trigger: CTTCAGCTGAAGTCTCACCCACCACGATGACCTCCC...GCCCTGGCCTGAGAGGCTCAGCAACAACGTGGAAGAGCTCCTACAATCCTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535884.5
CDS-3UTR CCA 90 bp GGGACTGTTGCTCCAACCCAAGGAAATGTGAGTAGGGGCCGAGTAACAGACCCATGGGGGAGGTCATCGTaGTGGGTGAGACTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: GTVAPTQGNVSRGRVTDPWGRSS*WVRLQL
Trigger: CAGCTGAAGTCTCACCCACCACGATGACCTCCCCCA...TGGGTCTGTTACTCGGCCCCTACTCACATTTCCTTGGGTTGGAGCAACAGTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR CCA 90 bp CTTCCTGCTTGTGTTCTTGTGTCGGCTCCTGCCTGTGCTCCACTCCTTGCTCCTTCTGTCACTGTGAAGTaGGGTGAGATGGGGGAGGTC +
Preference number: 4 (lower is better)
Translates to: LPACVLVSAPACAPLLAPSVTVK*GEMGEV
Trigger: GACCTCCCCCATCTCACCCCACTTCACAGTGACAGA...AGGAGCAAGGAGTGGAGCACAGGCAGGAGCCGACACAAGAACACAAGCAGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535884.5
CDS-3UTR CCA 90 bp GGGACTGTTGCTCCAACCCAAGGAAATGTGAGTAGGGGCCGAGTAACAGACCCACTTCACAGCCTTTCGTaGCAAGCCGGGCACACCAGA +
Preference number: 4 (lower is better)
Translates to: GTVAPTQGNVSRGRVTDPLHSLS*QAGHTR
Trigger: TCTGGTGTGCCCGGCTTGCCACGAAAGGCTGTGAAG...TGGGTCTGTTACTCGGCCCCTACTCACATTTCCTTGGGTTGGAGCAACAGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR CCA 90 bp TCATCTTTTAAGGAGGGCGCAGCTCCCACCGTGGCCCTCTCTGGGACTGTTGCTAAGGTGCTGAACTCCTaGCTCCATCGAAGCACAACG +
Preference number: 4 (lower is better)
Translates to: SSFKEGAAPTVALSGTVAKVLNS*LHRSTT
Trigger: CGTTGTGCTTCGATGGAGCCAGGAGTTCAGCACCTT...AGCAACAGTCCCAGAGAGGGCCACGGTGGGAGCTGCGCCCTCCTTAAAAGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR TCA 90 bp AGGAGTAGACTCTACTTCTCGTACCCGGGGAGCAAAAGAGGAAGGGTTAGAAGACAGCACCTTCAGGAGTaGGGGAAGGAAGCCAGCGGC +
Preference number: 4 (lower is better)
Translates to: RSRLYFSYPGSKRGRVRRQHLQE*GKEASG
Trigger: GCCGCTGGCTTCCTTCCCTCACTCCTGAAGGTGCTG...TCTTCTAACCCTTCCTCTTTTGCTCCCCGGGTACGAGAAGTAGAGTCTACTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000535884.5
CDS-3UTR TCA 90 bp GTTGCTCCAACCCAAGGAAATGTGAGTAGGGGCCGAGTAACAGACCCAGAAGGGCCTGGGCTGATCGAATaGGCTCCTGGATGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: VAPTQGNVSRGRVTDPEGPGLIE*APGCSP
Trigger: TGGAGAACATCCAGGAGCTCATTCGATCAGCCCAGG...CCCTTCTGGGTCTGTTACTCGGCCCCTACTCACATTTCCTTGGGTTGGAGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR GCA 90 bp TCATCTTTTAAGGAGGGCGCAGCTCCCACCGTGGCCCTCTCTGGGACTGTTGCTGGTTGGAGTCAGCAGTaGGAAGAAGCGTTCGTATTC +
Preference number: 4 (lower is better)
Translates to: SSFKEGAAPTVALSGTVAGWSQQ*EEAFVF
Trigger: GAATACGAACGCTTCTTCGCACTGCTGACTCCAACC...AGCAACAGTCCCAGAGAGGGCCACGGTGGGAGCTGCGCCCTCCTTAAAAGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR CCA 90 bp GTGAAGTGGGGTGAGATGGGGGAGGTCATCGTGGTGGGTGAGACTTCAGCTGAACTCTGCCTTCCAGGTTaGAGTCAGCAGTGCGAAGAA +
Preference number: 4 (lower is better)
Translates to: VKWGEMGEVIVVGETSAELCLPG*SQQCEE
Trigger: TTCTTCGCACTGCTGACTCCAACCTGGAAGGCAGAG...TTCAGCTGAAGTCTCACCCACCACGATGACCTCCCCCATCTCACCCCACTTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535884.5
CDS-3UTR CCA 90 bp GTTGCTCCAACCCAAGGAAATGTGAGTAGGGGCCGAGTAACAGACCCAGAAGGGTCTGTCACTGTGAAGTaGGGTGAGATGGGGGAGGTC +
Preference number: 4 (lower is better)
Translates to: VAPTQGNVSRGRVTDPEGSVTVK*GEMGEV
Trigger: GACCTCCCCCATCTCACCCCACTTCACAGTGACAGA...CCCTTCTGGGTCTGTTACTCGGCCCCTACTCACATTTCCTTGGGTTGGAGCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR CCA 90 bp AGTCATCTTTTAAGGAGGGCGCAGCTCCCACCGTGGCCCTCTCTGGGACTGTTGGGGAAATCCCCATCCTaGAAGCTAAGGAACTCAGTC +
Preference number: 4 (lower is better)
Translates to: SHLLRRAQLPPWPSLGLLGKSPS*KLRNSV
Trigger: GACTGAGTTCCTTAGCTTCCAGGATGGGGATTTCCC...CAACAGTCCCAGAGAGGGCCACGGTGGGAGCTGCGCCCTCCTTAAAAGATGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR TCA 90 bp TCATCTTTTAAGGAGGGCGCAGCTCCCACCGTGGCCCTCTCTGGGACTGTTGCTCTTGAGAGTGTTAGGTaGGAGAATAGAGACTGGCTG +
Preference number: 4 (lower is better)
Translates to: SSFKEGAAPTVALSGTVALESVR*ENRDWL
Trigger: CAGCCAGTCTCTATTCTCTCACCTAACACTCTCAAG...AGCAACAGTCCCAGAGAGGGCCACGGTGGGAGCTGCGCCCTCCTTAAAAGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR TCA 90 bp GGGACTGTTGCTCCAACCCAAGGAAATGTGAGTAGGGGCCGAGTAACAGACCCACTAGAGTCAAGGTGCTaGACTCCTGGCTCCATCGAA +
Preference number: 4 (lower is better)
Translates to: GTVAPTQGNVSRGRVTDPLESRC*TPGSIE
Trigger: TTCGATGGAGCCAGGAGTTCAGCACCTTGACTCTAG...TGGGTCTGTTACTCGGCCCCTACTCACATTTCCTTGGGTTGGAGCAACAGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR GCA 90 bp AGGGACAAGGAGGATTGTAGGAGCTCTTCCACGTTGTTGCTGAGCCTCTCAGGCTTCTGCCCCTCTTCCTaGTTGTGTTCTTGTGTCGGC +
Preference number: 4 (lower is better)
Translates to: RDKEDCRSSSTLLLSLSGFCPSS*LCSCVG
Trigger: GCCGACACAAGAACACAAGCAGGAAGAGGGGCAGAA...GCCTGAGAGGCTCAGCAACAACGTGGAAGAGCTCCTACAATCCTCCTTGTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535884.5
CDS-3UTR GCA 90 bp GTTGCTCCAACCCAAGGAAATGTGAGTAGGGGCCGAGTAACAGACCCAGAAGGGTCTGCAGACATCTCATaGGGGACACCTTCCGATTGC +
Preference number: 4 (lower is better)
Translates to: VAPTQGNVSRGRVTDPEGSADIS*GTPSDC
Trigger: GCAATCGGAAGGTGTCCCGCATGAGATGTCTGCAGA...CCCTTCTGGGTCTGTTACTCGGCCCCTACTCACATTTCCTTGGGTTGGAGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR CCA 90 bp GGGACTGTTGCTCCAACCCAAGGAAATGTGAGTAGGGGCCGAGTAACAGACCCACTCTGCCTTCCAGGTTaGAGTCAGCAGTGCGAAGAA +
Preference number: 4 (lower is better)
Translates to: GTVAPTQGNVSRGRVTDPLCLPG*SQQCEE
Trigger: TTCTTCGCACTGCTGACTCCAACCTGGAAGGCAGAG...TGGGTCTGTTACTCGGCCCCTACTCACATTTCCTTGGGTTGGAGCAACAGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR CCA 90 bp TTCCTGCTTGTGTTCTTGTGTCGGCTCCTGCCTGTGCTCCACTCCTTGCTCCTGCCGTGGTTTTCATATTaGTCCAGCTGGACGAGTGTG +
Preference number: 4 (lower is better)
Translates to: FLLVFLCRLLPVLHSLLLPWFSY*SSWTSV
Trigger: CACACTCGTCCAGCTGGACCAATATGAAAACCACGG...CAGGAGCAAGGAGTGGAGCACAGGCAGGAGCCGACACAAGAACACAAGCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535884.5
CDS-3UTR CCA 90 bp CTGTTTCTGCCCCTCTTCCTGCTTGTGTTCTTGTGTCGGCTCCTGCCTGTGCTCTCGGGCACTAAGCCGTaGTTTTCATATTGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: LFLPLFLLVFLCRLLPVLSGTKP*FSYWSS
Trigger: GCTGGACCAATATGAAAACCACGGCTTAGTGCCCGA...GAGCACAGGCAGGAGCCGACACAAGAACACAAGCAGGAAGAGGGGCAGAAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535884.5
CDS-3UTR CCA 90 bp AGGAGTAGACTCTACTTCTCGTACCCGGGGAGCAAAAGAGGAAGGGTTAGAAGACTCTCAGGCCAGGGCTaGAAGGTCTGGCGTTCTGTC +
Preference number: 4 (lower is better)
Translates to: RSRLYFSYPGSKRGRVRRLSGQG*KVWRSV
Trigger: GACAGAACGCCAGACCTTCCAGCCCTGGCCTGAGAG...TCTTCTAACCCTTCCTCTTTTGCTCCCCGGGTACGAGAAGTAGAGTCTACTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535884.5
CDS-3UTR TCA 90 bp AGTCATCTTTTAAGGAGGGCGCAGCTCCCACCGTGGCCCTCTCTGGGACTGTTGGATAGAGATTCAGAGTaGAACTTGGGCTCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: SHLLRRAQLPPWPSLGLLDRDSE*NLGSES
Trigger: AGACTCAGAGCCCAAGTTTCACTCTGAATCTCTATC...CAACAGTCCCAGAGAGGGCCACGGTGGGAGCTGCGCCCTCCTTAAAAGATGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR GCA 90 bp GGGACTGTTGCTCCAACCCAAGGAAATGTGAGTAGGGGCCGAGTAACAGACCCACCTCTCTGGGACTGTTaGTCCAACCCAAGGAAATGT +
Preference number: 4 (lower is better)
Translates to: GTVAPTQGNVSRGRVTDPPLWDC*SNPRKC
Trigger: ACATTTCCTTGGGTTGGAGCAACAGTCCCAGAGAGG...TGGGTCTGTTACTCGGCCCCTACTCACATTTCCTTGGGTTGGAGCAACAGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR CCA 90 bp GTTGCTCCAACCCAAGGAAATGTGAGTAGGGGCCGAGTAACAGACCCAGAAGGGCCGTGGTTTTCATATTaGTCCAGCTGGACGAGTGTG +
Preference number: 4 (lower is better)
Translates to: VAPTQGNVSRGRVTDPEGPWFSY*SSWTSV
Trigger: CACACTCGTCCAGCTGGACCAATATGAAAACCACGG...CCCTTCTGGGTCTGTTACTCGGCCCCTACTCACATTTCCTTGGGTTGGAGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR CCA 90 bp GGGACTGTTGCTCCAACCCAAGGAAATGTGAGTAGGGGCCGAGTAACAGACCCAACAAAGGGAGTCTTGTaGGAGGTGTCGCATTGTTGC +
Preference number: 4 (lower is better)
Translates to: GTVAPTQGNVSRGRVTDPTKGVL*EVSHCC
Trigger: GCAACAATGCGACACCTCCCACAAGACTCCCTTTGT...TGGGTCTGTTACTCGGCCCCTACTCACATTTCCTTGGGTTGGAGCAACAGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR CCA 90 bp TTCCTGCTTGTGTTCTTGTGTCGGCTCCTGCCTGTGCTCCACTCCTTGCTCCTGAGAATAGAGACTGGCTaGGAACACAGGACTCTCATC +
Preference number: 4 (lower is better)
Translates to: FLLVFLCRLLPVLHSLLLRIETG*EHRTLI
Trigger: GATGAGAGTCCTGTGTTCCCAGCCAGTCTCTATTCT...CAGGAGCAAGGAGTGGAGCACAGGCAGGAGCCGACACAAGAACACAAGCAGGAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535884.5
CDS-3UTR TCA 90 bp GTTGCTCCAACCCAAGGAAATGTGAGTAGGGGCCGAGTAACAGACCCAGAAGGGAGCAACGGTAGTGAGTaGACTGGCAGAAAGACTCAA +
Preference number: 4 (lower is better)
Translates to: VAPTQGNVSRGRVTDPEGSNGSE*TGRKTQ
Trigger: TTGAGTCTTTCTGCCAGTTCACTCACTACCGTTGCT...CCCTTCTGGGTCTGTTACTCGGCCCCTACTCACATTTCCTTGGGTTGGAGCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR TCA 90 bp GGGACTGTTGCTCCAACCCAAGGAAATGTGAGTAGGGGCCGAGTAACAGACCCAATCTATTTCCTGGGCTaGTCGAATGAGCTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: GTVAPTQGNVSRGRVTDPIYFLG*SNELLD
Trigger: ATCCAGGAGCTCATTCGATCAGCCCAGGAAATAGAT...TGGGTCTGTTACTCGGCCCCTACTCACATTTCCTTGGGTTGGAGCAACAGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR GCA 90 bp TCATCTTTTAAGGAGGGCGCAGCTCCCACCGTGGCCCTCTCTGGGACTGTTGCTTTTCTCATCAGACACTaGTGGCTTTTGAAGGAACAG +
Preference number: 4 (lower is better)
Translates to: SSFKEGAAPTVALSGTVAFLIRH*WLLKEQ
Trigger: CTGTTCCTTCAAAAGCCAGCAGTGTCTGATGAGAAA...AGCAACAGTCCCAGAGAGGGCCACGGTGGGAGCTGCGCCCTCCTTAAAAGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR CCA 90 bp GTTGCTCCAACCCAAGGAAATGTGAGTAGGGGCCGAGTAACAGACCCAGAAGGGAACACAGGACTCTCTTaGCATAGTAGACGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: VAPTQGNVSRGRVTDPEGNTGLS*HSRRGW
Trigger: CCAACCACGTCTACTATGCCAAGAGAGTCCTGTGTT...CCCTTCTGGGTCTGTTACTCGGCCCCTACTCACATTTCCTTGGGTTGGAGCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR CCA 90 bp TCATCTTTTAAGGAGGGCGCAGCTCCCACCGTGGCCCTCTCTGGGACTGTTGCTGATCGAATGAGCTCCTaGATGTTCTCCATTATCATA +
Preference number: 4 (lower is better)
Translates to: SSFKEGAAPTVALSGTVADRMSS*MFSIII
Trigger: TATGATAATGGAGAACATCCAGGAGCTCATTCGATC...AGCAACAGTCCCAGAGAGGGCCACGGTGGGAGCTGCGCCCTCCTTAAAAGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR CCA 90 bp TCATCTTTTAAGGAGGGCGCAGCTCCCACCGTGGCCCTCTCTGGGACTGTTGCTGAAGGAACAGTAGTTTaGGTACTGGATATAGTCTGT +
Preference number: 4 (lower is better)
Translates to: SSFKEGAAPTVALSGTVAEGTVV*VLDIVC
Trigger: ACAGACTATATCCAGTACCCAAACTACTGTTCCTTC...AGCAACAGTCCCAGAGAGGGCCACGGTGGGAGCTGCGCCCTCCTTAAAAGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR GCA 90 bp AGGAGTAGACTCTACTTCTCGTACCCGGGGAGCAAAAGAGGAAGGGTTAGAAGAGGTTGGAGTCAGCAGTaGGAAGAAGCGTTCGTATTC +
Preference number: 4 (lower is better)
Translates to: RSRLYFSYPGSKRGRVRRGWSQQ*EEAFVF
Trigger: GAATACGAACGCTTCTTCGCACTGCTGACTCCAACC...TCTTCTAACCCTTCCTCTTTTGCTCCCCGGGTACGAGAAGTAGAGTCTACTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535884.5
CDS CCA 90 bp GCACCTTCAGGAGTGAGGGAAGGAAGCCAGCGGCTGGCTTCCTCATaGCCGGAGAAGATCCGCCCGCGTCCCGTGGACACAAGCCGCCTC +
Preference number: 5 (lower is better)
Translates to: APSGVREGSQRLASS*PEKIRPRPVDTSRL
Trigger: GAGGCGGCTTGTGTCCACGGGACGCGGGCGGATCTTCTCCGGCCATGAGGAAGCCAGCCGCTGGCTTCCTTCCCTCACTCCTGAAGGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229243.7
ENST00000414226.6
ENST00000535884.5
ENST00000538524.1
ENST00000546114.1
CDS-3UTR CAA 90 bp AGGGCGCAGCTCCCACCGTGGCCCTCTCTGGGACTGTTGCTCCAACCCAAGGAACTTGTGCTCTGGCGCTaGCTCCTGGCCTCCCAGGGA +
Preference number: 5 (lower is better)
Translates to: RAQLPPWPSLGLLLQPKELVLWR*LLASQG
Trigger: TCCCTGGGAGGCCAGGAGCAAGCGCCAGAGCACAAG...TTCCTTGGGTTGGAGCAACAGTCCCAGAGAGGGCCACGGTGGGAGCTGCGCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR CAA 90 bp AGGGCGCAGCTCCCACCGTGGCCCTCTCTGGGACTGTTGCTCCAACCCAAGGAAGTGGGAGGTGTCGCATaGTTGCCGCTGCAGGCTGGC +
Preference number: 5 (lower is better)
Translates to: RAQLPPWPSLGLLLQPKEVGGVA*LPLQAG
Trigger: GCCAGCCTGCAGCGGCAACAATGCGACACCTCCCAC...TTCCTTGGGTTGGAGCAACAGTCCCAGAGAGGGCCACGGTGGGAGCTGCGCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS CCA 90 bp CAGTGCGAAGAAGCGTTCGTATTCGGTAGGAGAGAGAGGGCTGCCTaGAGTGGAGGCCTGAGTCGAATCCTGGGCTGCGGCAGGTGCCAG +
Preference number: 5 (lower is better)
Translates to: QCEEAFVFGRRERAA*SGGLSRILGCGRCQ
Trigger: CTGGCACCTGCCGCAGCCCAGGATTCGACTCAGGCCTCCACTCCAGGCAGCCCTCTCTCTCCTACCGAATACGAACGCTTCTTCGCACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229243.7
ENST00000414226.6
ENST00000535884.5
ENST00000536350.5
ENST00000538524.1
ENST00000544352.1
ENST00000546114.1
CDS-3UTR CAA 90 bp AGGGCGCAGCTCCCACCGTGGCCCTCTCTGGGACTGTTGCTCCAACCCAAGGAAAGCTCTTCCACGTTGTaGCTGAGCCTCTCAGGCCAG +
Preference number: 5 (lower is better)
Translates to: RAQLPPWPSLGLLLQPKESSSTL*LSLSGQ
Trigger: CTGGCCTGAGAGGCTCAGCAACAACGTGGAAGAGCT...TTCCTTGGGTTGGAGCAACAGTCCCAGAGAGGGCCACGGTGGGAGCTGCGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR CAA 90 bp TCATCTTTTAAGGAGGGCGCAGCTCCCACCGTGGCCCTCTCTGGGACTGTTGCTGGAGGTGTCGCATTGTaGCCGCTGCAGGCTGGCCTC +
Preference number: 5 (lower is better)
Translates to: SSFKEGAAPTVALSGTVAGGVAL*PLQAGL
Trigger: GAGGCCAGCCTGCAGCGGCAACAATGCGACACCTCC...AGCAACAGTCCCAGAGAGGGCCACGGTGGGAGCTGCGCCCTCCTTAAAAGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS GCA 90 bp GGGCTGACAAAGGGAGTCTTGTGGGAGGTGTCGCATTGTTGCCGCTaGAGGCTGGCCTCTGAGTGGCACTGCTCCAGCTTCAAGGAGCAG +
Preference number: 5 (lower is better)
Translates to: GLTKGVLWEVSHCCR*RLASEWHCSSFKEQ
Trigger: CTGCTCCTTGAAGCTGGAGCAGTGCCACTCAGAGGCCAGCCTGCAGCGGCAACAATGCGACACCTCCCACAAGACTCCCTTTGTCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229243.7
ENST00000414226.6
ENST00000542357.1
CDS CCA 90 bp CCCTCACCATCGGGCACTAAGCCGTGGTTTTCATATTGGTCCAGCTaGACGAGTGTGGGATTCCGGCAGCCGTGGGTTGCACGGAGACGG +
Preference number: 5 (lower is better)
Translates to: PSPSGTKPWFSYWSS*TSVGFRQPWVARRR
Trigger: CCGTCTCCGTGCAACCCACGGCTGCCGGAATCCCACACTCGTCCAGCTGGACCAATATGAAAACCACGGCTTAGTGCCCGATGGTGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538524.1
CDS-3UTR CAA 90 bp AGGAGCTCTTCCACGTTGTTGCTGAGCCTCTCAGGCCAGGGCTGGAAGGTCTGGACTCCTTGCTCCTGCTaGTGCTCTGGCGCTTGCTCC +
Preference number: 5 (lower is better)
Translates to: RSSSTLLLSLSGQGWKVWTPCSC*CSGACS
Trigger: GGAGCAAGCGCCAGAGCACAAGCAGGAGCAAGGAGT...CCAGACCTTCCAGCCCTGGCCTGAGAGGCTCAGCAACAACGTGGAAGAGCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535884.5
CDS TCA 90 bp CTACCTGGTTGCCGATGGACAGGCTCTGGGAGGCAAGCAAGGGGCTaGCAAAGGGAGTCTTGTGGGAGGTGTCGCATTGTTGCCGCTGCA +
Preference number: 5 (lower is better)
Translates to: LPGCRWTGSGRQARG*QRESCGRCRIVAAA
Trigger: TGCAGCGGCAACAATGCGACACCTCCCACAAGACTCCCTTTGTCAGCCCCTTGCTTGCCTCCCAGAGCCTGTCCATCGGCAACCAGGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229243.7
ENST00000414226.6
ENST00000542357.1
CDS GCA 90 bp GGGATTCCGGCAGCCGTGGGTTGCACGGAGACGGCAGGTAGTCTCTaGCTTCCAGGTTGGAGTCAGCAGTGCGAAGAAGCGTTCGTATTC +
Preference number: 5 (lower is better)
Translates to: GIPAAVGCTETAGSL*LPGWSQQCEEAFVF
Trigger: GAATACGAACGCTTCTTCGCACTGCTGACTCCAACCTGGAAGGCAGAGACTACCTGCCGTCTCCGTGCAACCCACGGCTGCCGGAATCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229243.7
ENST00000414226.6
ENST00000535884.5
ENST00000536350.5
ENST00000538524.1
ENST00000544352.1
ENST00000546114.1
CDS GCA 90 bp ATATTGGTCCAGCTGGACGAGTGTGGGATTCCGGCAGCCGTGGGTTaGACGGAGACGGCAGGTAGTCTCTGCCTTCCAGGTTGGAGTCAG +
Preference number: 5 (lower is better)
Translates to: ILVQLDECGIPAAVG*TETAGSLCLPGWSQ
Trigger: CTGACTCCAACCTGGAAGGCAGAGACTACCTGCCGTCTCCGTGCAACCCACGGCTGCCGGAATCCCACACTCGTCCAGCTGGACCAATAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229243.7
ENST00000414226.6
ENST00000535884.5
ENST00000536350.5
ENST00000538524.1
ENST00000544352.1
ENST00000546114.1
CDS GCA 90 bp GAGGTGTCGCATTGTTGCCGCTGCAGGCTGGCCTCTGAGTGGCACTaGTCCAGCTTCAAGGAGCAGAAGTCACAGAGGGCACAGGTAGAC +
Preference number: 5 (lower is better)
Translates to: EVSHCCRCRLASEWH*SSFKEQKSQRAQVD
Trigger: GTCTACCTGTGCCCTCTGTGACTTCTGCTCCTTGAAGCTGGAGCAGTGCCACTCAGAGGCCAGCCTGCAGCGGCAACAATGCGACACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229243.7
ENST00000414226.6
ENST00000542357.1
CDS GCA 90 bp AGCAAGGGGCTGACAAAGGGAGTCTTGTGGGAGGTGTCGCATTGTTaGCGCTGCAGGCTGGCCTCTGAGTGGCACTGCTCCAGCTTCAAG +
Preference number: 5 (lower is better)
Translates to: SKGLTKGVLWEVSHC*RCRLASEWHCSSFK
Trigger: CTTGAAGCTGGAGCAGTGCCACTCAGAGGCCAGCCTGCAGCGGCAACAATGCGACACCTCCCACAAGACTCCCTTTGTCAGCCCCTTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229243.7
ENST00000414226.6
ENST00000542357.1
CDS GCA 90 bp TCCTGCTTGTGTTCTTGTGTCGGCTCCTGCCTGTGCTCCACTCCTTaGTCCTGCTTGTGCTCTGGCGCTGTGAAGTGGGGTGAGATGGGG +
Preference number: 5 (lower is better)
Translates to: SCLCSCVGSCLCSTP*SCLCSGAVKWGEMG
Trigger: CCCCATCTCACCCCACTTCACAGCGCCAGAGCACAAGCAGGAGCAAGGAGTGGAGCACAGGCAGGAGCCGACACAAGAACACAAGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414226.6
CDS CCA 90 bp ACAGCACCATCGGGCACTAAGCCGTGGTTTTCATATTGGTCCAGCTaGACGAGTGTGGGATTCCGGCAGCCGTGGGTTGCACGGAGACGG +
Preference number: 5 (lower is better)
Translates to: TAPSGTKPWFSYWSS*TSVGFRQPWVARRR
Trigger: CCGTCTCCGTGCAACCCACGGCTGCCGGAATCCCACACTCGTCCAGCTGGACCAATATGAAAACCACGGCTTAGTGCCCGATGGTGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000229243.7
ENST00000414226.6
ENST00000536350.5
ENST00000544352.1
ENST00000546114.1
CDS CCA 90 bp CAGTCTGGAGCCACCCAGAGACTCGGACATCTTCACAGCCTTTCGTaGCAAGCCGGGCACACCAGAAGTCCATGTGGAGCCCACCGTACA +
Preference number: 5 (lower is better)
Translates to: QSGATQRLGHLHSLS*QAGHTRSPCGAHRT
Trigger: TGTACGGTGGGCTCCACATGGACTTCTGGTGTGCCCGGCTTGCCACGAAAGGCTGTGAAGATGTCCGAGTCTCTGGGTGGCTCCAGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229243.7
ENST00000414226.6
ENST00000542357.1
CDS CCA 90 bp GGACTCTCATCGGGCACTAAGCCGTGGTTTTCATATTGGTCCAGCTaGACGAGTGTGGGATTCCGGCAGCCGTGGGTTGCACGGAGACGG +
Preference number: 5 (lower is better)
Translates to: GLSSGTKPWFSYWSS*TSVGFRQPWVARRR
Trigger: CCGTCTCCGTGCAACCCACGGCTGCCGGAATCCCACACTCGTCCAGCTGGACCAATATGAAAACCACGGCTTAGTGCCCGATGAGAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535884.5
CDS-3UTR CAA 90 bp TCATCTTTTAAGGAGGGCGCAGCTCCCACCGTGGCCCTCTCTGGGACTGTTGCTACTCCTTGCTCCTGCTaGTGCTCTGGCGCTTGCTCC +
Preference number: 5 (lower is better)
Translates to: SSFKEGAAPTVALSGTVATPCSC*CSGACS
Trigger: GGAGCAAGCGCCAGAGCACAAGCAGGAGCAAGGAGT...AGCAACAGTCCCAGAGAGGGCCACGGTGGGAGCTGCGCCCTCCTTAAAAGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR CAA 90 bp CTCCTGCCTGTGCTCCACTCCTTGCTCCTGCTTGTGCTCTGGCGCTTGCTCCTGTTCCTGCTTGTGTTCTaGTGTCGGCTCCTGCCTGTG +
Preference number: 5 (lower is better)
Translates to: LLPVLHSLLLLVLWRLLLFLLVF*CRLLPV
Trigger: CACAGGCAGGAGCCGACACAAGAACACAAGCAGGAA...CAGGAGCAAGCGCCAGAGCACAAGCAGGAGCAAGGAGTGGAGCACAGGCAGGAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535884.5
CDS-3UTR CAA 90 bp GTTGCTCCAACCCAAGGAAATGTGAGTAGGGGCCGAGTAACAGACCCAGAAGGGGGGGACCCTACCTGGTaGCCGATGGACAGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: VAPTQGNVSRGRVTDPEGGDPTW*PMDRLW
Trigger: CCAGAGCCTGTCCATCGGCAACCAGGTAGGGTCCCC...CCCTTCTGGGTCTGTTACTCGGCCCCTACTCACATTTCCTTGGGTTGGAGCAAC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS GCA 90 bp ACGGAGACGGCAGGTAGTCTCTGCCTTCCAGGTTGGAGTCAGCAGTaGGAAGAAGCGTTCGTATTCGGTAGGAGAGAGAGGGCTGCCTGG +
Preference number: 5 (lower is better)
Translates to: TETAGSLCLPGWSQQ*EEAFVFGRRERAAW
Trigger: CCAGGCAGCCCTCTCTCTCCTACCGAATACGAACGCTTCTTCGCACTGCTGACTCCAACCTGGAAGGCAGAGACTACCTGCCGTCTCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229243.7
ENST00000414226.6
ENST00000535884.5
ENST00000536350.5
ENST00000538524.1
ENST00000544352.1
ENST00000546114.1
CDS GCA 90 bp TTCTGCCCCTCTTCCTGCTTGTGTTCTTGTGTCGGCTCCTGCCTGTaGTCCACTCCTTGCTCCTGCTTGTGCTCTGGCGCTGTGAAGTGG +
Preference number: 5 (lower is better)
Translates to: FCPSSCLCSCVGSCL*STPCSCLCSGAVKW
Trigger: CCACTTCACAGCGCCAGAGCACAAGCAGGAGCAAGGAGTGGAGCACAGGCAGGAGCCGACACAAGAACACAAGCAGGAAGAGGGGCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414226.6
CDS GCA 90 bp TGCCAGGGCTCAGCGCACTGTAAGTCTCATTCTGCAGACATCTCATaGGGGACACCGAGACCTCAACGTCCAAGTCCTGGCCCAGCCAAG +
Preference number: 5 (lower is better)
Translates to: CQGSAHCKSHSADIS*GTPRPQRPSPGPAK
Trigger: CTTGGCTGGGCCAGGACTTGGACGTTGAGGTCTCGGTGTCCCGCATGAGATGTCTGCAGAATGAGACTTACAGTGCGCTGAGCCCTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540513.1
CDS CCA 90 bp CAAAGGGAGTCTTGTGGGAGGTGTCGCATTGTTGCCGCTGCAGGCTaGCCTCTGAGTGGCACTGCTCCAGCTTCAAGGAGCAGAAGTCAC +
Preference number: 5 (lower is better)
Translates to: QRESCGRCRIVAAAG*PLSGTAPASRSRSH
Trigger: GTGACTTCTGCTCCTTGAAGCTGGAGCAGTGCCACTCAGAGGCCAGCCTGCAGCGGCAACAATGCGACACCTCCCACAAGACTCCCTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229243.7
ENST00000414226.6
ENST00000542357.1
CDS-3UTR CAA 90 bp TCATCTTTTAAGGAGGGCGCAGCTCCCACCGTGGCCCTCTCTGGGACTGTTGCTTGCCCCTCTTCCTGCTaGTGTTCTTGTGTCGGCTCC +
Preference number: 5 (lower is better)
Translates to: SSFKEGAAPTVALSGTVACPSSC*CSCVGS
Trigger: GGAGCCGACACAAGAACACAAGCAGGAAGAGGGGCA...AGCAACAGTCCCAGAGAGGGCCACGGTGGGAGCTGCGCCCTCCTTAAAAGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR CAA 90 bp TCATCTTTTAAGGAGGGCGCAGCTCCCACCGTGGCCCTCTCTGGGACTGTTGCTACAACGTCCTCACTTTaGCCAGGGCTCAGCGCACTG +
Preference number: 5 (lower is better)
Translates to: SSFKEGAAPTVALSGTVATTSSL*PGLSAL
Trigger: CAGTGCGCTGAGCCCTGGCAAAAGTGAGGACGTTGT...AGCAACAGTCCCAGAGAGGGCCACGGTGGGAGCTGCGCCCTCCTTAAAAGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS CCA 90 bp TTTTCATATTGGTCCAGCTGGACGAGTGTGGGATTCCGGCAGCCGTaGGTTGCACGGAGACGGCAGGTAGTCTCTGCCTTCCAGGTTGGA +
Preference number: 5 (lower is better)
Translates to: FSYWSSWTSVGFRQP*VARRRQVVSAFQVG
Trigger: TCCAACCTGGAAGGCAGAGACTACCTGCCGTCTCCGTGCAACCCACGGCTGCCGGAATCCCACACTCGTCCAGCTGGACCAATATGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229243.7
ENST00000414226.6
ENST00000535884.5
ENST00000536350.5
ENST00000538524.1
ENST00000544352.1
ENST00000546114.1
CDS CCA 90 bp ACGCCAGCTCATCCGAACTGGCCTAGAGTCAAGGTGCTGAACTCCTaGCTCCATCGAAGCACAACGTCCTCACTTTTGCCAGGGCTCAGC +
Preference number: 5 (lower is better)
Translates to: TPAHPNWPRVKVLNS*LHRSTTSSLLPGLS
Trigger: GCTGAGCCCTGGCAAAAGTGAGGACGTTGTGCTTCGATGGAGCCAGGAGTTCAGCACCTTGACTCTAGGCCAGTTCGGATGAGCTGGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229243.7
ENST00000414226.6
ENST00000540513.1
CDS-3UTR CAA 90 bp CTGTTTCTGCCCCTCTTCCTGCTTGTGTTCTTGTGTCGGCTCCTGCCTGTGCTCAGCTCTTCCACGTTGTaGCTGAGCCTCTCAGGCCAG +
Preference number: 5 (lower is better)
Translates to: LFLPLFLLVFLCRLLPVLSSSTL*LSLSGQ
Trigger: CTGGCCTGAGAGGCTCAGCAACAACGTGGAAGAGCT...GAGCACAGGCAGGAGCCGACACAAGAACACAAGCAGGAAGAGGGGCAGAAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535884.5
CDS-3UTR CAA 90 bp CTGTTTCTGCCCCTCTTCCTGCTTGTGTTCTTGTGTCGGCTCCTGCCTGTGCTCTGCCCCTCTTCCTGCTaGTGTTCTTGTGTCGGCTCC +
Preference number: 5 (lower is better)
Translates to: LFLPLFLLVFLCRLLPVLCPSSC*CSCVGS
Trigger: GGAGCCGACACAAGAACACAAGCAGGAAGAGGGGCA...GAGCACAGGCAGGAGCCGACACAAGAACACAAGCAGGAAGAGGGGCAGAAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535884.5
CDS GCA 90 bp ACCCCTTTCATGCAGAAACAGGCGGCTGAGGCTCAGAGGGGGAAGTaGCTCATCCCAGGCTACTTGGTGAGTAAGAAGAGGAGACAGACC +
Preference number: 5 (lower is better)
Translates to: TPFMQKQAAEAQRGK*LIPGYLVSKKRRQT
Trigger: GGTCTGTCTCCTCTTCTTACTCACCAAGTAGCCTGGGATGAGGCACTTCCCCCTCTGAGCCTCAGCCGCCTGTTTCTGCATGAAAGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542357.1
CDS-3UTR CAA 90 bp AGTCATCTTTTAAGGAGGGCGCAGCTCCCACCGTGGCCCTCTCTGGGACTGTTGGCCGTGGTTTTCATATaGGTCCAGCTGGACGAGTGT +
Preference number: 5 (lower is better)
Translates to: SHLLRRAQLPPWPSLGLLAVVFI*VQLDEC
Trigger: ACACTCGTCCAGCTGGACCAATATGAAAACCACGGC...CAACAGTCCCAGAGAGGGCCACGGTGGGAGCTGCGCCCTCCTTAAAAGATGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR CAA 90 bp AGGGCGCAGCTCCCACCGTGGCCCTCTCTGGGACTGTTGCTCCAACCCAAGGAAGAAGCTTCTATCTCCTaGAGAGTGTTAGGTGAGAGA +
Preference number: 5 (lower is better)
Translates to: RAQLPPWPSLGLLLQPKEEASIS*RVLGER
Trigger: TCTCTCACCTAACACTCTCAAGGAGATAGAAGCTTC...TTCCTTGGGTTGGAGCAACAGTCCCAGAGAGGGCCACGGTGGGAGCTGCGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR CAA 90 bp AGTCATCTTTTAAGGAGGGCGCAGCTCCCACCGTGGCCCTCTCTGGGACTGTTGCTGACAAAGGGAGTCTaGTGGGAGGTGTCGCATTGT +
Preference number: 5 (lower is better)
Translates to: SHLLRRAQLPPWPSLGLLLTKGV*WEVSHC
Trigger: ACAATGCGACACCTCCCACAAGACTCCCTTTGTCAG...CAACAGTCCCAGAGAGGGCCACGGTGGGAGCTGCGCCCTCCTTAAAAGATGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR CAA 90 bp GGGACTGTTGCTCCAACCCAAGGAAATGTGAGTAGGGGCCGAGTAACAGACCCATCTCTGCCTTCCAGGTaGGAGTCAGCAGTGCGAAGA +
Preference number: 5 (lower is better)
Translates to: GTVAPTQGNVSRGRVTDPSLPSR*ESAVRR
Trigger: TCTTCGCACTGCTGACTCCAACCTGGAAGGCAGAGA...TGGGTCTGTTACTCGGCCCCTACTCACATTTCCTTGGGTTGGAGCAACAGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR CAA 90 bp ATAGGAGTAGACTCTACTTCTCGTACCCGGGGAGCAAAAGAGGAAGGGTTAGAACTTGTGCTCTGGCGCTaGCTCCTGGCCTCCCAGGGA +
Preference number: 5 (lower is better)
Translates to: IGVDSTSRTRGAKEEGLELVLWR*LLASQG
Trigger: TCCCTGGGAGGCCAGGAGCAAGCGCCAGAGCACAAG...TTCTAACCCTTCCTCTTTTGCTCCCCGGGTACGAGAAGTAGAGTCTACTCCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535884.5
CDS-3UTR CAA 90 bp GTTGCTCCAACCCAAGGAAATGTGAGTAGGGGCCGAGTAACAGACCCAGAAGGGTTCCTGCTTGTGTTCTaGTGTCGGCTCCTGCCTGTG +
Preference number: 5 (lower is better)
Translates to: VAPTQGNVSRGRVTDPEGFLLVF*CRLLPV
Trigger: CACAGGCAGGAGCCGACACAAGAACACAAGCAGGAA...CCCTTCTGGGTCTGTTACTCGGCCCCTACTCACATTTCCTTGGGTTGGAGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR CAA 90 bp GTTGCTCCAACCCAAGGAAATGTGAGTAGGGGCCGAGTAACAGACCCAGAAGGGCGGGACACCTTCCGATaGCGGTTTCTCATCAGACAC +
Preference number: 5 (lower is better)
Translates to: VAPTQGNVSRGRVTDPEGRDTFR*RFLIRH
Trigger: GTGTCTGATGAGAAACCGCAATCGGAAGGTGTCCCG...CCCTTCTGGGTCTGTTACTCGGCCCCTACTCACATTTCCTTGGGTTGGAGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS-3UTR CAA 90 bp GTTGCTCCAACCCAAGGAAATGTGAGTAGGGGCCGAGTAACAGACCCAGAAGGGCCCTCTCTGGGACTGTaGCTCCAACCCAAGGAAATG +
Preference number: 5 (lower is better)
Translates to: VAPTQGNVSRGRVTDPEGPSLGL*LQPKEM
Trigger: CATTTCCTTGGGTTGGAGCAACAGTCCCAGAGAGGG...CCCTTCTGGGTCTGTTACTCGGCCCCTACTCACATTTCCTTGGGTTGGAGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS TCA 90 bp GGATCTCCTCCTCCATGTACTTCCAGGCCTTGGCTGTGGGGGTTATaGTGCAGGTATTCTCCACGATCGAATAGCACAGCACCAGCAAGG +
Preference number: 5 (lower is better)
Translates to: GSPPPCTSRPWLWGL*CRYSPRSNSTAPAR
Trigger: CCTTGCTGGTGCTGTGCTATTCGATCGTGGAGAATACCTGCATCATAACCCCCACAGCCAAGGCCTGGAAGTACATGGAGGAGGAGATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229243.7
ENST00000414226.6
ENST00000542357.1
CDS TCA 90 bp CAGAATAGACGCCAGCTCATCCGAACTGGCCTAGAGTCAAGGTGCTaGACTCCTGGCTCCATCGAAGCACAACGTCCTCACTTTTGCCAG +
Preference number: 5 (lower is better)
Translates to: QNRRQLIRTGLESRC*TPGSIEAQRPHFCQ
Trigger: CTGGCAAAAGTGAGGACGTTGTGCTTCGATGGAGCCAGGAGTTCAGCACCTTGACTCTAGGCCAGTTCGGATGAGCTGGCGTCTATTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229243.7
ENST00000414226.6
ENST00000540513.1
CDS-3UTR CAA 90 bp GACAAGGAGGATTGTAGGAGCTCTTCCACGTTGTTGCTGAGCCTCTCAGGCCAGGCCGTGGTTTTCATATaGGTCCAGCTGGACGAGTGT +
Preference number: 5 (lower is better)
Translates to: DKEDCRSSSTLLLSLSGQAVVFI*VQLDEC
Trigger: ACACTCGTCCAGCTGGACCAATATGAAAACCACGGC...CTGGCCTGAGAGGCTCAGCAACAACGTGGAAGAGCTCCTACAATCCTCCTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535884.5
CDS-3UTR CAA 90 bp GTTGCTCCAACCCAAGGAAATGTGAGTAGGGGCCGAGTAACAGACCCAGAAGGGATGTACTTCCAGGCCTaGGCTGTGGGGGTTATGATG +
Preference number: 5 (lower is better)
Translates to: VAPTQGNVSRGRVTDPEGMYFQA*AVGVMM
Trigger: CATCATAACCCCCACAGCCAAGGCCTGGAAGTACAT...CCCTTCTGGGTCTGTTACTCGGCCCCTACTCACATTTCCTTGGGTTGGAGCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS TCA 90 bp GGACTCTCTTGGCATAGTAGACGTGGTTGGAGCAACGGTAGTGAGTaGACTGGCAGAAAGACTCAAACCAGGAGGCATAAGGGAGGTTGG +
Preference number: 5 (lower is better)
Translates to: GLSWHSRRGWSNGSE*TGRKTQTRRHKGGW
Trigger: CCAACCTCCCTTATGCCTCCTGGTTTGAGTCTTTCTGCCAGTTCACTCACTACCGTTGCTCCAACCACGTCTACTATGCCAAGAGAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229243.7
ENST00000414226.6
ENST00000536350.5
ENST00000544352.1
ENST00000546114.1
CDS-3UTR CAA 90 bp AGGAGTAGACTCTACTTCTCGTACCCGGGGAGCAAAAGAGGAAGGGTTAGAAGATCTCTGCCTTCCAGGTaGGAGTCAGCAGTGCGAAGA +
Preference number: 5 (lower is better)
Translates to: RSRLYFSYPGSKRGRVRRSLPSR*ESAVRR
Trigger: TCTTCGCACTGCTGACTCCAACCTGGAAGGCAGAGA...TCTTCTAACCCTTCCTCTTTTGCTCCCCGGGTACGAGAAGTAGAGTCTACTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535884.5
CDS-3UTR CAA 90 bp GTTGCTCCAACCCAAGGAAATGTGAGTAGGGGCCGAGTAACAGACCCAGAAGGGTCTGTGTCACAAATCTaGGTAGGGAAATCCCCATCC +
Preference number: 5 (lower is better)
Translates to: VAPTQGNVSRGRVTDPEGSVSQI*VGKSPS
Trigger: GGATGGGGATTTCCCTACCAAGATTTGTGACACAGA...CCCTTCTGGGTCTGTTACTCGGCCCCTACTCACATTTCCTTGGGTTGGAGCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229243.7
CDS TCA 90 bp GGGACACCTTCCGATTGCGGTTTCTCATCAGACACTGCTGGCTTTTaGAGGAACAGTAGTTTGGGTACTGGATATAGTCTGTGTCACAAA +
Preference number: 5 (lower is better)
Translates to: GTPSDCGFSSDTAGF*RNSSLGTGYSLCHK
Trigger: TTTGTGACACAGACTATATCCAGTACCCAAACTACTGTTCCTTCAAAAGCCAGCAGTGTCTGATGAGAAACCGCAATCGGAAGGTGTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229243.7
ENST00000414226.6
CDS TCA 90 bp GCCAGGACTTCCGATTGCGGTTTCTCATCAGACACTGCTGGCTTTTaGAGGAACAGTAGTTTGGGTACTGGATATAGTCTGTGTCACAAA +
Preference number: 5 (lower is better)
Translates to: ARTSDCGFSSDTAGF*RNSSLGTGYSLCHK
Trigger: TTTGTGACACAGACTATATCCAGTACCCAAACTACTGTTCCTTCAAAAGCCAGCAGTGTCTGATGAGAAACCGCAATCGGAAGTCCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542357.1
CDS GCA 90 bp AGAAGGGAGGGCAGGGTGGATGACAGAGTCAAAACTTCCTATACCTaGCAGGGTTTTGGTTTCTCCAGTAGGAGTTCTCATCATATATTT +
Preference number: 5 (lower is better)
Translates to: RREGRVDDRVKTSYT*QGFGFSSRSSHHIF
Trigger: AAATATATGATGAGAACTCCTACTGGAGAAACCAAAACCCTGGCAGGTATAGGAAGTTTTGACTCTGTCATCCACCCTGCCCTCCCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536350.5
CDS CCA 72 bp CTTCCTCATGGCCGGAGAAGATCCGCCCGCGTCCCGTaGACACAAGCCGCCTCTAACGGGCCAAGCCGCAGA +
Preference number: 6 (lower is better)
Translates to: LPHGRRRSARVP*TQAASNGPSRR
Trigger: TCTGCGGCTTGGCCCGTTAGAGGCGGCTTGTGTCCACGGGACGCGGGCGGATCTTCTCCGGCCATGAGGAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229243.7
ENST00000546114.1
CDS CCA 72 bp GGAGTGAGGGAAGGAAGCCAGCGGCTGGCTTCCTCATaGCCGGAGAAGATCCGCCCGCGTCCCGTGGACACA +
Preference number: 6 (lower is better)
Translates to: GVREGSQRLASS*PEKIRPRPVDT
Trigger: TGTGTCCACGGGACGCGGGCGGATCTTCTCCGGCCATGAGGAAGCCAGCCGCTGGCTTCCTTCCCTCACTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229243.7
ENST00000414226.6
ENST00000535884.5
ENST00000538524.1
ENST00000546114.1
CDS TCA 72 bp AGAGGCAGGAGCAGCACTGCGGAGCGGGCGAACGGATaGTGGAAGGACCGAACCCCAAAACCCGCTCCGAGA +
Preference number: 6 (lower is better)
Translates to: RGRSSTAERANG*WKDRTPKPAPR
Trigger: TCTCGGAGCGGGTTTTGGGGTTCGGTCCTTCCATCATCCGTTCGCCCGCTCCGCAGTGCTGCTCCTGCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544352.1
CDS GCA 72 bp CAGCTGGACGAGTGTGGGATTCCGGCAGCCGTGGGTTaGACGGAGACGGCAGGTAGTCTCTGCCTTCCAGGT +
Preference number: 6 (lower is better)
Translates to: QLDECGIPAAVG*TETAGSLCLPG
Trigger: ACCTGGAAGGCAGAGACTACCTGCCGTCTCCGTGCAACCCACGGCTGCCGGAATCCCACACTCGTCCAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229243.7
ENST00000414226.6
ENST00000535884.5
ENST00000536350.5
ENST00000538524.1
ENST00000544352.1
ENST00000546114.1
CDS CCA 72 bp TGGTCCAGCTGGACGAGTGTGGGATTCCGGCAGCCGTaGGTTGCACGGAGACGGCAGGTAGTCTCTGCCTTC +
Preference number: 6 (lower is better)
Translates to: WSSWTSVGFRQP*VARRRQVVSAF
Trigger: GAAGGCAGAGACTACCTGCCGTCTCCGTGCAACCCACGGCTGCCGGAATCCCACACTCGTCCAGCTGGACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229243.7
ENST00000414226.6
ENST00000535884.5
ENST00000536350.5
ENST00000538524.1
ENST00000544352.1
ENST00000546114.1
CDS CCA 72 bp GGGCTGTGGGCAATGGACTCCACGCCATGGGGAGGGTaGAGAGTACGAGCTCATGGTGTGGTGCCAGCCATG +
Preference number: 6 (lower is better)
Translates to: GLWAMDSTPWGG*RVRAHGVVPAM
Trigger: CATGGCTGGCACCACACCATGAGCTCGTACTCTCCACCCTCCCCATGGCGTGGAGTCCATTGCCCACAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538524.1
CDS CCA 72 bp CTTGGGGTGGGGCTGTGGGCAATGGACTCCACGCCATaGGGAGGGTGGAGAGTACGAGCTCATGGTGTGGTG +
Preference number: 6 (lower is better)
Translates to: LGVGLWAMDSTP*GGWRVRAHGVV
Trigger: CACCACACCATGAGCTCGTACTCTCCACCCTCCCCATGGCGTGGAGTCCATTGCCCACAGCCCCACCCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538524.1
CDS CAA 72 bp GTCGGCTCCTGCCTGTGCTCCACTCCTTGCTCCTGCTaGTGCTCTGGCGCTGTGAAGTGGGGTGAGATGGGG +
Preference number: 6 (lower is better)
Translates to: VGSCLCSTPCSC*CSGAVKWGEMG
Trigger: CCCCATCTCACCCCACTTCACAGCGCCAGAGCACAAGCAGGAGCAAGGAGTGGAGCACAGGCAGGAGCCGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414226.6
CDS GCA 72 bp CATGGGGAGGGTGGAGAGTACGAGCTCATGGTGTGGTaGCAGCCATGCCCTTCCCCGCCTCACATGAGCACA +
Preference number: 6 (lower is better)
Translates to: HGEGGEYELMVW*QPCPSPPHMST
Trigger: TGTGCTCATGTGAGGCGGGGAAGGGCATGGCTGGCACCACACCATGAGCTCGTACTCTCCACCCTCCCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538524.1
CDS CCA 72 bp CTTCCGCCAGGACTGGAGGAATGGAGGAGAGCCTGCTaGTGGAGGCCTCTGCCCCAGAGATGCAAGCAGGAA +
Preference number: 6 (lower is better)
Translates to: LPPGLEEWRRAC*WRPLPQRCKQE
Trigger: TTCCTGCTTGCATCTCTGGGGCAGAGGCCTCCACCAGCAGGCTCTCCTCCATTCCTCCAGTCCTGGCGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540513.1
CDS CAA 90 bp ATGGACAGGCTCTGGGAGGCAAGCAAGGGGCTGACAAAGGGAGTCTaGTGGGAGGTGTCGCATTGTTGCCGCTGCAGGCTGGCCTCTGAG +
Preference number: 6 (lower is better)
Translates to: MDRLWEASKGLTKGV*WEVSHCCRCRLASE
Trigger: CTCAGAGGCCAGCCTGCAGCGGCAACAATGCGACACCTCCCACAAGACTCCCTTTGTCAGCCCCTTGCTTGCCTCCCAGAGCCTGTCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229243.7
ENST00000414226.6
ENST00000542357.1
CDS CAA 90 bp CTCTTAGGACCCTCCTCTGTTATCCACCAGCTGCCTAGGAGGGCCTaGCTTCCGCCAGGACTGGAGGAATGGAGGAGAGCCTGCTGGTGG +
Preference number: 6 (lower is better)
Translates to: LLGPSSVIHQLPRRA*LPPGLEEWRRACWW
Trigger: CCACCAGCAGGCTCTCCTCCATTCCTCCAGTCCTGGCGGAAGCAAGGCCCTCCTAGGCAGCTGGTGGATAACAGAGGAGGGTCCTAAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540513.1
CDS GCA 72 bp AAGGGAGTCTTGTGGGAGGTGTCGCATTGTTGCCGCTaGAGGCTGGCCTCTGAGTGGCACTGCTCCAGCTTC +
Preference number: 6 (lower is better)
Translates to: KGVLWEVSHCCR*RLASEWHCSSF
Trigger: GAAGCTGGAGCAGTGCCACTCAGAGGCCAGCCTGCAGCGGCAACAATGCGACACCTCCCACAAGACTCCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229243.7
ENST00000414226.6
ENST00000542357.1
CDS CCA 72 bp AGCCGTGGTTTTCATATTGGTCCAGCTGGACGAGTGTaGGATTCCGGCAGCCGTGGGTTGCACGGAGACGGC +
Preference number: 6 (lower is better)
Translates to: SRGFHIGPAGRV*DSGSRGLHGDG
Trigger: GCCGTCTCCGTGCAACCCACGGCTGCCGGAATCCCACACTCGTCCAGCTGGACCAATATGAAAACCACGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229243.7
ENST00000414226.6
ENST00000535884.5
ENST00000536350.5
ENST00000538524.1
ENST00000544352.1
ENST00000546114.1
CDS CCA 72 bp TCTGGGGACCCTACCTGGTTGCCGATGGACAGGCTCTaGGAGGCAAGCAAGGGGCTGACAAAGGGAGTCTTG +
Preference number: 6 (lower is better)
Translates to: SGDPTWLPMDRL*EASKGLTKGVL
Trigger: CAAGACTCCCTTTGTCAGCCCCTTGCTTGCCTCCCAGAGCCTGTCCATCGGCAACCAGGTAGGGTCCCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229243.7
ENST00000414226.6
ENST00000542357.1
CDS CCA 72 bp GCCACCCAGAGACTCGGACATCTTCACAGCCTTTCGTaGCAAGCCGGGCACACCAGAAGTCCATGTGGAGCC +
Preference number: 6 (lower is better)
Translates to: ATQRLGHLHSLS*QAGHTRSPCGA
Trigger: GGCTCCACATGGACTTCTGGTGTGCCCGGCTTGCCACGAAAGGCTGTGAAGATGTCCGAGTCTCTGGGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229243.7
ENST00000414226.6
ENST00000542357.1
CDS CAA 72 bp CTCTGGGAGGCAAGCAAGGGGCTGACAAAGGGAGTCTaGTGGGAGGTGTCGCATTGTTGCCGCTGCAGGCTG +
Preference number: 6 (lower is better)
Translates to: LWEASKGLTKGV*WEVSHCCRCRL
Trigger: CAGCCTGCAGCGGCAACAATGCGACACCTCCCACAAGACTCCCTTTGTCAGCCCCTTGCTTGCCTCCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229243.7
ENST00000414226.6
ENST00000542357.1
CDS TCA 72 bp GAGCCCACCGTACAAATCCAGCCCGTAAAAGCGGCCTaGTTCTGGGGACCCTACCTGGTTGCCGATGGACAG +
Preference number: 6 (lower is better)
Translates to: EPTVQIQPVKAA*FWGPYLVADGQ
Trigger: CTGTCCATCGGCAACCAGGTAGGGTCCCCAGAATCAGGCCGCTTTTACGGGCTGGATTTGTACGGTGGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229243.7
ENST00000414226.6
ENST00000542357.1
CDS GCA 72 bp GGTGGAGAGTACGAGCTCATGGTGTGGTGCCAGCCATaGCCTTCCCCGCCTCACATGAGCACAGGGGTTTTT +
Preference number: 6 (lower is better)
Translates to: GGEYELMVWCQP*PSPPHMSTGVF
Trigger: AAAAACCCCTGTGCTCATGTGAGGCGGGGAAGGGCATGGCTGGCACCACACCATGAGCTCGTACTCTCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538524.1
CDS TCA 72 bp TGCCGATGGACAGGCTCTGGGAGGCAAGCAAGGGGCTaGCAAAGGGAGTCTTGTGGGAGGTGTCGCATTGTT +
Preference number: 6 (lower is better)
Translates to: CRWTGSGRQARG*QRESCGRCRIV
Trigger: AACAATGCGACACCTCCCACAAGACTCCCTTTGTCAGCCCCTTGCTTGCCTCCCAGAGCCTGTCCATCGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229243.7
ENST00000414226.6
ENST00000542357.1
CDS TCA 72 bp CGCCAGCTCATCCGAACTGGCCTAGAGTCAAGGTGCTaGACTCCTGGCTCCATCGAAGCACAACGTCCTCAC +
Preference number: 6 (lower is better)
Translates to: RQLIRTGLESRC*TPGSIEAQRPH
Trigger: GTGAGGACGTTGTGCTTCGATGGAGCCAGGAGTTCAGCACCTTGACTCTAGGCCAGTTCGGATGAGCTGGCG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229243.7
ENST00000414226.6
ENST00000540513.1
CDS GCA 72 bp CCTCCTCTGTTATCCACCAGCTGCCTAGGAGGGCCTTaGTTCCGCCAGGACTTCCGATTGCGGTTTCTCATC +
Preference number: 6 (lower is better)
Translates to: PPLLSTSCLGGP*FRQDFRLRFLI
Trigger: GATGAGAAACCGCAATCGGAAGTCCTGGCGGAAGCAAGGCCCTCCTAGGCAGCTGGTGGATAACAGAGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542357.1
CDS CCA 72 bp TCGGGCACTAAGCCGTGGTTTTCATATTGGTCCAGCTaGACGAGTGTGGGATTCCGGCAGCCGTGGGTTGCA +
Preference number: 6 (lower is better)
Translates to: SGTKPWFSYWSS*TSVGFRQPWVA
Trigger: TGCAACCCACGGCTGCCGGAATCCCACACTCGTCCAGCTGGACCAATATGAAAACCACGGCTTAGTGCCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229243.7
ENST00000414226.6
ENST00000535884.5
ENST00000536350.5
ENST00000538524.1
ENST00000544352.1
ENST00000546114.1
CDS CCA 72 bp CCCCTAGTCTGGCCCTCACCATCGGGCACTAAGCCGTaGTTTTCATATTGGTCCAGCTGGACGAGTGTGGGA +
Preference number: 6 (lower is better)
Translates to: PLVWPSPSGTKP*FSYWSSWTSVG
Trigger: TCCCACACTCGTCCAGCTGGACCAATATGAAAACCACGGCTTAGTGCCCGATGGTGAGGGCCAGACTAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538524.1
CDS CAA 72 bp GAGGCTCAGAGGGGGAAGTGCCTCATCCCAGGCTACTaGGTGAGTAAGAAGAGGAGACAGACCGAGACCTCA +
Preference number: 6 (lower is better)
Translates to: EAQRGKCLIPGY*VSKKRRQTETS
Trigger: TGAGGTCTCGGTCTGTCTCCTCTTCTTACTCACCAAGTAGCCTGGGATGAGGCACTTCCCCCTCTGAGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542357.1
CDS TCA 72 bp CTCAGAGGGGGAAGTGCCTCATCCCAGGCTACTTGGTaGGTAAGAAGAGGAGACAGACCGAGACCTCAACGT +
Preference number: 6 (lower is better)
Translates to: LRGGSASSQATW*VRRGDRPRPQR
Trigger: ACGTTGAGGTCTCGGTCTGTCTCCTCTTCTTACTCACCAAGTAGCCTGGGATGAGGCACTTCCCCCTCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542357.1
CDS GCA 72 bp GCAGGTAGTCTCTGCCTTCCAGGTTGGAGTCAGCAGTaGGAAGAAGCGTTCGTATTCGGTAGGAGAGAGAGG +
Preference number: 6 (lower is better)
Translates to: AGSLCLPGWSQQ*EEAFVFGRRER
Trigger: CCTCTCTCTCCTACCGAATACGAACGCTTCTTCGCACTGCTGACTCCAACCTGGAAGGCAGAGACTACCTGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229243.7
ENST00000414226.6
ENST00000535884.5
ENST00000536350.5
ENST00000538524.1
ENST00000544352.1
ENST00000546114.1
CDS CCA 72 bp AGGTTGGAGCAGACAGCACCATCGGGCACTAAGCCGTaGTTTTCATATTGGTCCAGCTGGACGAGTGTGGGA +
Preference number: 6 (lower is better)
Translates to: RLEQTAPSGTKP*FSYWSSWTSVG
Trigger: TCCCACACTCGTCCAGCTGGACCAATATGAAAACCACGGCTTAGTGCCCGATGGTGCTGTCTGCTCCAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000229243.7
ENST00000414226.6
ENST00000536350.5
ENST00000544352.1
ENST00000546114.1
CDS CCA 72 bp GGTCTCAAAACAATAGAGAACGTGGGCAGGTTGGGCTaGGGTGTGGGCAGAATAGACGCCAGCTCATCCGAA +
Preference number: 6 (lower is better)
Translates to: GLKTIENVGRLG*GVGRIDASSSE
Trigger: TTCGGATGAGCTGGCGTCTATTCTGCCCACACCCCAGCCCAACCTGCCCACGTTCTCTATTGTTTTGAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229243.7
ENST00000414226.6
ENST00000540513.1
CDS CCA 72 bp GCTGGGAACACAGGACTCTCATCGGGCACTAAGCCGTaGTTTTCATATTGGTCCAGCTGGACGAGTGTGGGA +
Preference number: 6 (lower is better)
Translates to: AGNTGLSSGTKP*FSYWSSWTSVG
Trigger: TCCCACACTCGTCCAGCTGGACCAATATGAAAACCACGGCTTAGTGCCCGATGAGAGTCCTGTGTTCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535884.5
CDS GCA 72 bp ACTCCTGGCTCCATCGAAGCACAACGTCCTCACTTTTaGCAGGGCTCAGCGCACTGTAAGTCTCATTCTGCA +
Preference number: 6 (lower is better)
Translates to: TPGSIEAQRPHF*QGSAHCKSHSA
Trigger: TGCAGAATGAGACTTACAGTGCGCTGAGCCCTGGCAAAAGTGAGGACGTTGTGCTTCGATGGAGCCAGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229243.7
ENST00000414226.6
ENST00000540513.1
CDS CCA 72 bp CATCCGAACTGGCCTAGAGTCAAGGTGCTGAACTCCTaGCTCCATCGAAGCACAACGTCCTCACTTTTGCCA +
Preference number: 6 (lower is better)
Translates to: HPNWPRVKVLNS*LHRSTTSSLLP
Trigger: TGGCAAAAGTGAGGACGTTGTGCTTCGATGGAGCCAGGAGTTCAGCACCTTGACTCTAGGCCAGTTCGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229243.7
ENST00000414226.6
ENST00000540513.1
CDS TCA 72 bp CCTCCATGTACTTCCAGGCCTTGGCTGTGGGGGTTATaGTGCAGGTATTCTCCACGATCGAATAGCACAGCA +
Preference number: 6 (lower is better)
Translates to: PPCTSRPWLWGL*CRYSPRSNSTA
Trigger: TGCTGTGCTATTCGATCGTGGAGAATACCTGCATCATAACCCCCACAGCCAAGGCCTGGAAGTACATGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229243.7
ENST00000414226.6
ENST00000542357.1
CDS CAA 90 bp GAGGTCATCGTGGTGGGTGAGACTTCAGCTGAAGCTTCTATCTCCTaGAGAGTGTTAGGTGAGAGAATAGAGACTGGCTGGGAACACAGG +
Preference number: 6 (lower is better)
Translates to: EVIVVGETSAEASIS*RVLGERIETGWEHR
Trigger: CCTGTGTTCCCAGCCAGTCTCTATTCTCTCACCTAACACTCTCAAGGAGATAGAAGCTTCAGCTGAAGTCTCACCCACCACGATGACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000229243.7
ENST00000414226.6
ENST00000535884.5
ENST00000536350.5
ENST00000544352.1
ENST00000546114.1
CDS CCA 72 bp TCTGTGTCACAAATCTTGGTAGGGAAATCCCCATCCTaGAAGCTAAGGAACTCAGTCTGGAGCCACCCAGAG +
Preference number: 6 (lower is better)
Translates to: SVSQILVGKSPS*KLRNSVWSHPE
Trigger: CTCTGGGTGGCTCCAGACTGAGTTCCTTAGCTTCCAGGATGGGGATTTCCCTACCAAGATTTGTGACACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229243.7
ENST00000414226.6
ENST00000542357.1
CDS CCA 72 bp GCACAGGGCAGTAGAGGGAAGGAGGAAACTCAAATGTaGGTTTTTAAAGCCAGAGGAGACATCAAGCAGCCC +
Preference number: 6 (lower is better)
Translates to: AQGSRGKEETQM*VFKARGDIKQP
Trigger: GGGCTGCTTGATGTCTCCTCTGGCTTTAAAAACCCACATTTGAGTTTCCTCCTTCCCTCTACTGCCCTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542357.1
CDS TCA 72 bp TGGCATAGTAGACGTGGTTGGAGCAACGGTAGTGAGTaGACTGGCAGAAAGACTCAAACCAGGAGGCATAAG +
Preference number: 6 (lower is better)
Translates to: WHSRRGWSNGSE*TGRKTQTRRHK
Trigger: CTTATGCCTCCTGGTTTGAGTCTTTCTGCCAGTTCACTCACTACCGTTGCTCCAACCACGTCTACTATGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229243.7
ENST00000414226.6
ENST00000536350.5
ENST00000544352.1
ENST00000546114.1
CDS CAA 72 bp GTGGTGGGTGAGACTTCAGCTGAAGCTTCTATCTCCTaGAGAGTGTTAGGTGAGAGAATAGAGACTGGCTGG +
Preference number: 6 (lower is better)
Translates to: VVGETSAEASIS*RVLGERIETGW
Trigger: CCAGCCAGTCTCTATTCTCTCACCTAACACTCTCAAGGAGATAGAAGCTTCAGCTGAAGTCTCACCCACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000229243.7
ENST00000414226.6
ENST00000535884.5
ENST00000536350.5
ENST00000544352.1
ENST00000546114.1
CDS TCA 72 bp TCCGATTGCGGTTTCTCATCAGACACTGCTGGCTTTTaGAGGAACAGTAGTTTGGGTACTGGATATAGTCTG +
Preference number: 6 (lower is better)
Translates to: SDCGFSSDTAGF*RNSSLGTGYSL
Trigger: CAGACTATATCCAGTACCCAAACTACTGTTCCTTCAAAAGCCAGCAGTGTCTGATGAGAAACCGCAATCGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229243.7
ENST00000414226.6
ENST00000542357.1
CDS CAA 90 bp GCAGGGTGGATGACAGAGTCAAAACTTCCTATACCTGCCAGGGTTTaGGTTTCTCCAGTAGGAGTTCTCATCATATATTTCATTCATTTC +
Preference number: 6 (lower is better)
Translates to: AGWMTESKLPIPARV*VSPVGVLIIYFIHF
Trigger: GAAATGAATGAAATATATGATGAGAACTCCTACTGGAGAAACCAAAACCCTGGCAGGTATAGGAAGTTTTGACTCTGTCATCCACCCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536350.5