RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ACP7 (Homo sapiens)

Ensembl gene IDs: ENSG00000183760

Ensembl transcript IDs: ENST00000331256.10, ENST00000594229.1, ENST00000601531.1, ENST00000601575.5

Found 303 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGTGGGCACCTCGCCCGATCAGAGCTATGCAGGAGGGTGGGGCCCTaGCAGCAGAAACCTGCCGTGTGTCACTCTGTGCCCGCACACCTG +
Preference number: 1 (lower is better)
Translates to: RGHLARSELCRRVGP*QQKPAVCHSVPAHL
Trigger: CAGGTGTGCGGGCACAGAGTGACACACGGCAGGTTTCTGCTGGCAGGGCCCCACCCTCCTGCATAGCTCTGATCGGGCGAGGTGCCCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
3UTR GCA 90 bp CCGATCAGAGCTATGCAGGAGGGTGGGGCCCTGCCAGCAGAAACCTaGCGTGTGTCACTCTGTGCCCGCACACCTGCCCTCCCTCCACAG +
Preference number: 1 (lower is better)
Translates to: PIRAMQEGGALPAET*RVSLCARTPALPPQ
Trigger: CTGTGGAGGGAGGGCAGGTGTGCGGGCACAGAGTGACACACGGCAGGTTTCTGCTGGCAGGGCCCCACCCTCCTGCATAGCTCTGATCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
3UTR TCA 90 bp CATCCTGGTCGTCCGACACCTGCTGGATGTGGATGTGGGTCCCGTTaGGGATGTGCAGCCGCGTATACCCGTACTCCTTCACACGCACGG +
Preference number: 1 (lower is better)
Translates to: HPGRPTPAGCGCGSR*GCAAAYTRTPSHAR
Trigger: CCGTGCGTGTGAAGGAGTACGGGTATACGCGGCTGCACATCCTCAACGGGACCCACATCCACATCCAGCAGGTGTCGGACGACCAGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601575.5
3UTR GCA 90 bp TCGTCCGACACCTGCTGGATGTGGATGTGGGTCCCGTTGAGGATGTaGAGCCGCGTATACCCGTACTCCTTCACACGCACGGCACTCCAG +
Preference number: 1 (lower is better)
Translates to: SSDTCWMWMWVPLRM*SRVYPYSFTRTALQ
Trigger: CTGGAGTGCCGTGCGTGTGAAGGAGTACGGGTATACGCGGCTGCACATCCTCAACGGGACCCACATCCACATCCAGCAGGTGTCGGACGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601575.5
3UTR CCA 90 bp AATCCATGGAGCCAGAGCTTAAGCCTCTTCATTCCTGAAGCCCCGTaGGCACCTCGCCCGATCAGAGCTATGCAGGAGGGTGGGGCCCTG +
Preference number: 1 (lower is better)
Translates to: NPWSQSLSLFIPEAP*APRPIRAMQEGGAL
Trigger: CAGGGCCCCACCCTCCTGCATAGCTCTGATCGGGCGAGGTGCCCACGGGGCTTCAGGAATGAAGAGGCTTAAGCTCTGGCTCCATGGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
3UTR CCA 90 bp GGCAGTTTCTGGTCACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTaGAGGAGAGCTGCCGCCATCCCTAGAGGTACATCCTCCGGCCAA +
Preference number: 1 (lower is better)
Translates to: GSFWSQQPRRQNLGF*RRAAAIPRGTSSGQ
Trigger: TTGGCCGGAGGATGTACCTCTAGGGATGGCGGCAGCTCTCCTCCAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGTGACCAGAAACTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601575.5
3UTR TCA 90 bp GGCTTCAGACCAACTCTCAGTGCCGGGCTCAGAAGAAAAAGCCCCTaGCGCCACCTGCTGGTGAGTAGTGTCATGACGGTTGTGCCCACC +
Preference number: 1 (lower is better)
Translates to: GFRPTLSAGLRRKSP*RHLLVSSVMTVVPT
Trigger: GGTGGGCACAACCGTCATGACACTACTCACCAGCAGGTGGCGTCAGGGGCTTTTTCTTCTGAGCCCGGCACTGAGAGTTGGTCTGAAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
3UTR GCA 90 bp TCCTGGAGCAGTGAAGAAGGAGCCAGGCTTCAGACCAACTCTCAGTaGCGGGCTCAGAAGAAAAAGCCCCTGACGCCACCTGCTGGTGAG +
Preference number: 1 (lower is better)
Translates to: SWSSEEGARLQTNSQ*RAQKKKPLTPPAGE
Trigger: CTCACCAGCAGGTGGCGTCAGGGGCTTTTTCTTCTGAGCCCGGCACTGAGAGTTGGTCTGAAGCCTGGCTCCTTCTTCACTGCTCCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
3UTR CCA 90 bp ACGATCTTCCCATCCTGGTCGTCCGACACCTGCTGGATGTGGATGTaGGTCCCGTTGAGGATGTGCAGCCGCGTATACCCGTACTCCTTC +
Preference number: 1 (lower is better)
Translates to: TIFPSWSSDTCWMWM*VPLRMCSRVYPYSF
Trigger: GAAGGAGTACGGGTATACGCGGCTGCACATCCTCAACGGGACCCACATCCACATCCAGCAGGTGTCGGACGACCAGGATGGGAAGATCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601575.5
3UTR TCA 90 bp AGATGTGCAGAATCCATGGAGCCAGAGCTTAAGCCTCTTCATTCCTaGAGCCCCGTGGGCACCTCGCCCGATCAGAGCTATGCAGGAGGG +
Preference number: 1 (lower is better)
Translates to: RCAESMEPELKPLHS*SPVGTSPDQSYAGG
Trigger: CCCTCCTGCATAGCTCTGATCGGGCGAGGTGCCCACGGGGCTTCAGGAATGAAGAGGCTTAAGCTCTGGCTCCATGGATTCTGCACATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
3UTR GCA 90 bp ACCCAGACATCATCTACGATCTTCCCATCCTGGTCGTCCGACACCTaGTGGATGTGGATGTGGGTCCCGTTGAGGATGTGCAGCCGCGTA +
Preference number: 1 (lower is better)
Translates to: TQTSSTIFPSWSSDT*WMWMWVPLRMCSRV
Trigger: TACGCGGCTGCACATCCTCAACGGGACCCACATCCACATCCAGCAGGTGTCGGACGACCAGGATGGGAAGATCGTAGATGATGTCTGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601575.5
3UTR CCA 90 bp TCATCTACGATCTTCCCATCCTGGTCGTCCGACACCTGCTGGATGTaGATGTGGGTCCCGTTGAGGATGTGCAGCCGCGTATACCCGTAC +
Preference number: 1 (lower is better)
Translates to: SSTIFPSWSSDTCWM*MWVPLRMCSRVYPY
Trigger: GTACGGGTATACGCGGCTGCACATCCTCAACGGGACCCACATCCACATCCAGCAGGTGTCGGACGACCAGGATGGGAAGATCGTAGATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601575.5
3UTR CCA 90 bp AACAGGGGTCTCACCACCCAGACATCATCTACGATCTTCCCATCCTaGTCGTCCGACACCTGCTGGATGTGGATGTGGGTCCCGTTGAGG +
Preference number: 1 (lower is better)
Translates to: NRGLTTQTSSTIFPS*SSDTCWMWMWVPLR
Trigger: CCTCAACGGGACCCACATCCACATCCAGCAGGTGTCGGACGACCAGGATGGGAAGATCGTAGATGATGTCTGGGTGGTGAGACCCCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601575.5
3UTR CCA 90 bp CTGTTCCTCTGCCTGGAATGCTCTTCCCCCAGATGTCTGCCCACTTaGCTCCTTCCCCACCTCCTTCAGATCAAATGTTGCCCTCTCAGT +
Preference number: 1 (lower is better)
Translates to: LFLCLECSSPRCLPT*LLPHLLQIKCCPLS
Trigger: ACTGAGAGGGCAACATTTGATCTGAAGGAGGTGGGGAAGGAGCCAAGTGGGCAGACATCTGGGGGAAGAGCATTCCAGGCAGAGGAACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
3UTR-3UTR CCA 90 bp CTGAAGCCCCGTGGGCACCTCGCCCGATCAGAGCTATGCAGGAGGGTGGGGCCCGGCCTGGGCAGTTTCTaGTCACAGCAGCCAAGGCGG +
Preference number: 2 (lower is better)
Translates to: LKPRGHLARSELCRRVGPGLGSF*SQQPRR
Trigger: CCGCCTTGGCTGCTGTGACCAGAAACTGCCCAGGCC...GGGCCCCACCCTCCTGCATAGCTCTGATCGGGCGAGGTGCCCACGGGGCTTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
3UTR-3UTR GCA 90 bp CTGCCTGGAATGCTCTTCCCCCAGATGTCTGCCCACTTGGCTCCTTCCCCACCTCTGTGCCCGCACACCTaGCCTCCCTCCACAGCCAGC +
Preference number: 2 (lower is better)
Translates to: LPGMLFPQMSAHLAPSPPLCPHT*PPSTAS
Trigger: GCTGGCTGTGGAGGGAGGGCAGGTGTGCGGGCACAG...AGGTGGGGAAGGAGCCAAGTGGGCAGACATCTGGGGGAAGAGCATTCCAGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
3UTR-3UTR GCA 90 bp AGAGGAGGAAGCCCAGCGGCATCCCCCGCAGATGTGCAGAATCCATGGAGCCAGACCTGGCGATGCCCTTaGCAGGTGGGCAGGAGAGGA +
Preference number: 2 (lower is better)
Translates to: RGGSPAASPADVQNPWSQTWRCP*QVGRRG
Trigger: TCCTCTCCTGCCCACCTGGCAAGGGCATCGCCAGGT...CTGGCTCCATGGATTCTGCACATCTGCGGGGGATGCCGCTGGGCTTCCTCCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
3UTR-3UTR GCA 90 bp TCCTCTGCCTGGAATGCTCTTCCCCCAGATGTCTGCCCACTTGGCTCCTTCCCCACCTGGCGATGCCCTTaGCAGGTGGGCAGGAGAGGA +
Preference number: 2 (lower is better)
Translates to: SSAWNALPPDVCPLGSFPTWRCP*QVGRRG
Trigger: TCCTCTCCTGCCCACCTGGCAAGGGCATCGCCAGGT...GGGGAAGGAGCCAAGTGGGCAGACATCTGGGGGAAGAGCATTCCAGGCAGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
3UTR CAA 90 bp CCATCCTGGTCGTCCGACACCTGCTGGATGTGGATGTGGGTCCCGTaGAGGATGTGCAGCCGCGTATACCCGTACTCCTTCACACGCACG +
Preference number: 2 (lower is better)
Translates to: PSWSSDTCWMWMWVP*RMCSRVYPYSFTRT
Trigger: CGTGCGTGTGAAGGAGTACGGGTATACGCGGCTGCACATCCTCAACGGGACCCACATCCACATCCAGCAGGTGTCGGACGACCAGGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601575.5
3UTR-3UTR TCA 90 bp CTGGTGAGTAGTGTCATGACGGTTGTGCCCACCTGGCGATGCCCTTGCCAGGTGAAGCCTCTTCATTCCTaGAGCCCCGTGGGCACCTCG +
Preference number: 2 (lower is better)
Translates to: LVSSVMTVVPTWRCPCQVKPLHS*SPVGTS
Trigger: CGAGGTGCCCACGGGGCTTCAGGAATGAAGAGGCTT...CACCTGGCAAGGGCATCGCCAGGTGGGCACAACCGTCATGACACTACTCACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
3UTR-3UTR GCA 90 bp CAGAGCTTAAGCCTCTTCATTCCTGAAGCCCCGTGGGCACCTCGCCCGATCAGACCAGGAGGGAACAGCTaGCCCAGCTCCATAGGGCTG +
Preference number: 2 (lower is better)
Translates to: QSLSLFIPEAPWAPRPIRPGGNS*PSSIGL
Trigger: CAGCCCTATGGAGCTGGGGCAGCTGTTCCCTCCTGG...TCTGATCGGGCGAGGTGCCCACGGGGCTTCAGGAATGAAGAGGCTTAAGCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
3UTR-3UTR CCA 90 bp CCTGGAATGCTCTTCCCCCAGATGTCTGCCCACTTGGCTCCTTCCCCACCTCCTATTCCTGAAGCCCCGTaGGCACCTCGCCCGATCAGA +
Preference number: 2 (lower is better)
Translates to: PGMLFPQMSAHLAPSPPPIPEAP*APRPIR
Trigger: TCTGATCGGGCGAGGTGCCCACGGGGCTTCAGGAAT...AGGAGGTGGGGAAGGAGCCAAGTGGGCAGACATCTGGGGGAAGAGCATTCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
3UTR-3UTR GCA 90 bp ACTGTACCCAGCCGGCCAGGCACATTTCTGTCTCAGGGCCTTTGCACTGGCTGTCTTCCCCCAGATGTCTaGCCACTTGGCTCCTTCCCC +
Preference number: 2 (lower is better)
Translates to: TVPSRPGTFLSQGLCTGCLPPDV*PLGSFP
Trigger: GGGGAAGGAGCCAAGTGGGCAGACATCTGGGGGAAG...ACAGCCAGTGCAAAGGCCCTGAGACAGAAATGTGCCTGGCCGGCTGGGTACAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
3UTR-3UTR CCA 90 bp CAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGGAGGAGAGCTGCCGCCATCCCTCAAAACCTAGGCTTCTaGAGGAGAGCTGCCGCCATC +
Preference number: 2 (lower is better)
Translates to: QQPRRQNLGFWRRAAAIPQNLGF*RRAAAI
Trigger: GATGGCGGCAGCTCTCCTCCAGAAGCCTAGGTTTTG...AGGGATGGCGGCAGCTCTCCTCCAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594229.1
ENST00000601575.5
3UTR-3UTR GCA 90 bp CAGAGCTTAAGCCTCTTCATTCCTGAAGCCCCGTGGGCACCTCGCCCGATCAGACTGCCAGCAGAAACCTaGCGTGTGTCACTCTGTGCC +
Preference number: 2 (lower is better)
Translates to: QSLSLFIPEAPWAPRPIRLPAET*RVSLCA
Trigger: GGCACAGAGTGACACACGGCAGGTTTCTGCTGGCAG...TCTGATCGGGCGAGGTGCCCACGGGGCTTCAGGAATGAAGAGGCTTAAGCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
3UTR-3UTR CCA 90 bp CAGAATCCATGGAGCCAGAGCTTAAGCCTCTTCATTCCTGAAGCCCCGTGGGCAACGGTTGTGCCCACCTaGCGATGCCCTTGCCAGGTG +
Preference number: 2 (lower is better)
Translates to: QNPWSQSLSLFIPEAPWATVVPT*RCPCQV
Trigger: CACCTGGCAAGGGCATCGCCAGGTGGGCACAACCGT...TGCCCACGGGGCTTCAGGAATGAAGAGGCTTAAGCTCTGGCTCCATGGATTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
3UTR-3UTR GCA 90 bp CAGAGCTTAAGCCTCTTCATTCCTGAAGCCCCGTGGGCACCTCGCCCGATCAGACATCCCCCGCAGATGTaGAGAATCCATGGAGCCAGA +
Preference number: 2 (lower is better)
Translates to: QSLSLFIPEAPWAPRPIRHPPQM*RIHGAR
Trigger: TCTGGCTCCATGGATTCTGCACATCTGCGGGGGATG...TCTGATCGGGCGAGGTGCCCACGGGGCTTCAGGAATGAAGAGGCTTAAGCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
3UTR-3UTR CCA 90 bp GATGTGCAGAATCCATGGAGCCAGAGCTTAAGCCTCTTCATTCCTGAAGCCCCGGGCCTGGGCAGTTTCTaGTCACAGCAGCCAAGGCGG +
Preference number: 2 (lower is better)
Translates to: DVQNPWSQSLSLFIPEAPGLGSF*SQQPRR
Trigger: CCGCCTTGGCTGCTGTGACCAGAAACTGCCCAGGCC...CGGGGCTTCAGGAATGAAGAGGCTTAAGCTCTGGCTCCATGGATTCTGCACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
3UTR-3UTR GCA 90 bp TTTTGTCCAACTCTCTGGTTAGGATGTCAGCTCTGTGAGGGCCGAGATCTCTGTCCGTGTGTCACTCTGTaGCCGCACACCTGCCCTCCC +
Preference number: 2 (lower is better)
Translates to: FCPTLWLGCQLCEGRDLCPCVTL*PHTCPP
Trigger: GGGAGGGCAGGTGTGCGGGCACAGAGTGACACACGG...ACAGAGATCTCGGCCCTCACAGAGCTGACATCCTAACCAGAGAGTTGGACAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
3UTR-3UTR GCA 90 bp TTTTGTCCAACTCTCTGGTTAGGATGTCAGCTCTGTGAGGGCCGAGATCTCTGTGCCCGATCAGAGCTATaGAGGAGGGTGGGGCCCTGC +
Preference number: 2 (lower is better)
Translates to: FCPTLWLGCQLCEGRDLCARSEL*RRVGPC
Trigger: GCAGGGCCCCACCCTCCTGCATAGCTCTGATCGGGC...ACAGAGATCTCGGCCCTCACAGAGCTGACATCCTAACCAGAGAGTTGGACAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
3UTR-3UTR GCA 90 bp TGCCCTCTCAGTGAGATCCCCCTGAAAATTGAAACTGCTCTCTCACCGTCCCTGCTGCCAGCAGAAACCTaGCGTGTGTCACTCTGTGCC +
Preference number: 2 (lower is better)
Translates to: CPLSEIPLKIETALSPSLLPAET*RVSLCA
Trigger: GGCACAGAGTGACACACGGCAGGTTTCTGCTGGCAG...CAGGGACGGTGAGAGAGCAGTTTCAATTTTCAGGGGGATCTCACTGAGAGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
3UTR-3UTR CCA 90 bp TTTTGTCCAACTCTCTGGTTAGGATGTCAGCTCTGTGAGGGCCGAGATCTCTGTACGGTTGTGCCCACCTaGCGATGCCCTTGCCAGGTG +
Preference number: 2 (lower is better)
Translates to: FCPTLWLGCQLCEGRDLCTVVPT*RCPCQV
Trigger: CACCTGGCAAGGGCATCGCCAGGTGGGCACAACCGT...ACAGAGATCTCGGCCCTCACAGAGCTGACATCCTAACCAGAGAGTTGGACAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
3UTR-3UTR TCA 90 bp TTTTGTCCAACTCTCTGGTTAGGATGTCAGCTCTGTGAGGGCCGAGATCTCTGTAAGCCTCTTCATTCCTaGAGCCCCGTGGGCACCTCG +
Preference number: 2 (lower is better)
Translates to: FCPTLWLGCQLCEGRDLCKPLHS*SPVGTS
Trigger: CGAGGTGCCCACGGGGCTTCAGGAATGAAGAGGCTT...ACAGAGATCTCGGCCCTCACAGAGCTGACATCCTAACCAGAGAGTTGGACAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
3UTR-3UTR TCA 90 bp TGCCCTCTCAGTGAGATCCCCCTGAAAATTGAAACTGCTCTCTCACCGTCCCTGCTGTCTCTCCAGCACTaGGAACAGAGCCTGGCACAT +
Preference number: 2 (lower is better)
Translates to: CPLSEIPLKIETALSPSLLSLQH*EQSLAH
Trigger: ATGTGCCAGGCTCTGTTCTCAGTGCTGGAGAGACAG...CAGGGACGGTGAGAGAGCAGTTTCAATTTTCAGGGGGATCTCACTGAGAGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
3UTR-3UTR CCA 90 bp TGCCCTCTCAGTGAGATCCCCCTGAAAATTGAAACTGCTCTCTCACCGTCCCTGCAAAACCTAGGCTTCTaGAGGAGAGCTGCCGCCATC +
Preference number: 2 (lower is better)
Translates to: CPLSEIPLKIETALSPSLQNLGF*RRAAAI
Trigger: GATGGCGGCAGCTCTCCTCCAGAAGCCTAGGTTTTG...CAGGGACGGTGAGAGAGCAGTTTCAATTTTCAGGGGGATCTCACTGAGAGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
3UTR-3UTR CCA 90 bp ACTGTACCCAGCCGGCCAGGCACATTTCTGTCTCAGGGCCTTTGCACTGGCTGTACTGAGAACAGAGCCTaGCACATGGTAGATGCTCAA +
Preference number: 2 (lower is better)
Translates to: TVPSRPGTFLSQGLCTGCTENRA*HMVDAQ
Trigger: TTGAGCATCTACCATGTGCCAGGCTCTGTTCTCAGT...ACAGCCAGTGCAAAGGCCCTGAGACAGAAATGTGCCTGGCCGGCTGGGTACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
3UTR-3UTR CCA 90 bp TGCCCTCTCAGTGAGATCCCCCTGAAAATTGAAACTGCTCTCTCACCGTCCCTGGATGTGCAGAATCCATaGAGCCAGAGCTTAAGCCTC +
Preference number: 2 (lower is better)
Translates to: CPLSEIPLKIETALSPSLDVQNP*SQSLSL
Trigger: GAGGCTTAAGCTCTGGCTCCATGGATTCTGCACATC...CAGGGACGGTGAGAGAGCAGTTTCAATTTTCAGGGGGATCTCACTGAGAGGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
3UTR-3UTR CCA 90 bp TGCCCTCTCAGTGAGATCCCCCTGAAAATTGAAACTGCTCTCTCACCGTCCCTGTCTTCCCGAATAAGATaGTGCCAGGCTGGGAAACTG +
Preference number: 2 (lower is better)
Translates to: CPLSEIPLKIETALSPSLSSRIR*CQAGKL
Trigger: CAGTTTCCCAGCCTGGCACCATCTTATTCGGGAAGA...CAGGGACGGTGAGAGAGCAGTTTCAATTTTCAGGGGGATCTCACTGAGAGGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
3UTR-3UTR CCA 90 bp GACTACAGATGTGAGTTACTGTACCCAGCCGGCCAGGCACATTTCTGTCTCAGGAAAGAGGGAAGGAACTaGCAAGTCTGTGGCTCTTGC +
Preference number: 2 (lower is better)
Translates to: DYRCELLYPAGQAHFCLRKEGRN*QVCGSC
Trigger: GCAAGAGCCACAGACTTGCCAGTTCCTTCCCTCTTT...CCTGAGACAGAAATGTGCCTGGCCGGCTGGGTACAGTAACTCACATCTGTAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
3UTR GCA 72 bp CTCGCCCGATCAGAGCTATGCAGGAGGGTGGGGCCCTaGCAGCAGAAACCTGCCGTGTGTCACTCTGTGCCC +
Preference number: 3 (lower is better)
Translates to: LARSELCRRVGP*QQKPAVCHSVP
Trigger: GGGCACAGAGTGACACACGGCAGGTTTCTGCTGGCAGGGCCCCACCCTCCTGCATAGCTCTGATCGGGCGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
3UTR GCA 72 bp CCAGCCAGGACTCCCACCTCTCCAGGAGGGAACAGCTaGCCCAGCTCCATAGGGCTGCATGTACCCTACATG +
Preference number: 3 (lower is better)
Translates to: PARTPTSPGGNS*PSSIGLHVPYM
Trigger: CATGTAGGGTACATGCAGCCCTATGGAGCTGGGGCAGCTGTTCCCTCCTGGAGAGGTGGGAGTCCTGGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
3UTR CCA 72 bp CCATCCTGGTCGTCCGACACCTGCTGGATGTGGATGTaGGTCCCGTTGAGGATGTGCAGCCGCGTATACCCG +
Preference number: 3 (lower is better)
Translates to: PSWSSDTCWMWM*VPLRMCSRVYP
Trigger: CGGGTATACGCGGCTGCACATCCTCAACGGGACCCACATCCACATCCAGCAGGTGTCGGACGACCAGGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601575.5
3UTR CCA 72 bp AGCCAGAGCTTAAGCCTCTTCATTCCTGAAGCCCCGTaGGCACCTCGCCCGATCAGAGCTATGCAGGAGGGT +
Preference number: 3 (lower is better)
Translates to: SQSLSLFIPEAP*APRPIRAMQEG
Trigger: ACCCTCCTGCATAGCTCTGATCGGGCGAGGTGCCCACGGGGCTTCAGGAATGAAGAGGCTTAAGCTCTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
3UTR CCA 72 bp ATCTTCCCATCCTGGTCGTCCGACACCTGCTGGATGTaGATGTGGGTCCCGTTGAGGATGTGCAGCCGCGTA +
Preference number: 3 (lower is better)
Translates to: IFPSWSSDTCWM*MWVPLRMCSRV
Trigger: TACGCGGCTGCACATCCTCAACGGGACCCACATCCACATCCAGCAGGTGTCGGACGACCAGGATGGGAAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601575.5
3UTR CCA 72 bp TGGTCACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTaGAGGAGAGCTGCCGCCATCCCTAGAGGTACATCC +
Preference number: 3 (lower is better)
Translates to: WSQQPRRQNLGF*RRAAAIPRGTS
Trigger: GGATGTACCTCTAGGGATGGCGGCAGCTCTCCTCCAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGTGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594229.1
ENST00000601575.5
3UTR CCA 72 bp TCTACGATCTTCCCATCCTGGTCGTCCGACACCTGCTaGATGTGGATGTGGGTCCCGTTGAGGATGTGCAGC +
Preference number: 3 (lower is better)
Translates to: STIFPSWSSDTC*MWMWVPLRMCS
Trigger: GCTGCACATCCTCAACGGGACCCACATCCACATCCAGCAGGTGTCGGACGACCAGGATGGGAAGATCGTAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601575.5
3UTR TCA 72 bp GAATCCATGGAGCCAGAGCTTAAGCCTCTTCATTCCTaGAGCCCCGTGGGCACCTCGCCCGATCAGAGCTAT +
Preference number: 3 (lower is better)
Translates to: ESMEPELKPLHS*SPVGTSPDQSY
Trigger: ATAGCTCTGATCGGGCGAGGTGCCCACGGGGCTTCAGGAATGAAGAGGCTTAAGCTCTGGCTCCATGGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
3UTR GCA 72 bp AGTGAAGAAGGAGCCAGGCTTCAGACCAACTCTCAGTaGCGGGCTCAGAAGAAAAAGCCCCTGACGCCACCT +
Preference number: 3 (lower is better)
Translates to: SEEGARLQTNSQ*RAQKKKPLTPP
Trigger: AGGTGGCGTCAGGGGCTTTTTCTTCTGAGCCCGGCACTGAGAGTTGGTCTGAAGCCTGGCTCCTTCTTCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
3UTR GCA 72 bp TCATCTACGATCTTCCCATCCTGGTCGTCCGACACCTaGTGGATGTGGATGTGGGTCCCGTTGAGGATGTGC +
Preference number: 3 (lower is better)
Translates to: SSTIFPSWSSDT*WMWMWVPLRMC
Trigger: GCACATCCTCAACGGGACCCACATCCACATCCAGCAGGTGTCGGACGACCAGGATGGGAAGATCGTAGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601575.5
3UTR CCA 72 bp CTCACCACCCAGACATCATCTACGATCTTCCCATCCTaGTCGTCCGACACCTGCTGGATGTGGATGTGGGTC +
Preference number: 3 (lower is better)
Translates to: LTTQTSSTIFPS*SSDTCWMWMWV
Trigger: GACCCACATCCACATCCAGCAGGTGTCGGACGACCAGGATGGGAAGATCGTAGATGATGTCTGGGTGGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601575.5
3UTR CCA 72 bp TGCCTGGAATGCTCTTCCCCCAGATGTCTGCCCACTTaGCTCCTTCCCCACCTCCTTCAGATCAAATGTTGC +
Preference number: 3 (lower is better)
Translates to: CLECSSPRCLPT*LLPHLLQIKCC
Trigger: GCAACATTTGATCTGAAGGAGGTGGGGAAGGAGCCAAGTGGGCAGACATCTGGGGGAAGAGCATTCCAGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
3UTR TCA 72 bp GGCATGAAGGGACTCTTCATAGCAGTCCTGGAGCAGTaGAGAAGGAGCCAGGCTTCAGACCAACTCTCAGTG +
Preference number: 3 (lower is better)
Translates to: GMKGLFIAVLEQ*RRSQASDQLSV
Trigger: CACTGAGAGTTGGTCTGAAGCCTGGCTCCTTCTTCACTGCTCCAGGACTGCTATGAAGAGTCCCTTCATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
3UTR-3UTR CAA 90 bp GACTACAGATGTGAGTTACTGTACCCAGCCGGCCAGGCACATTTCTGTCTCAGGTGTGGCTCTTGCGGTTaGTCATCTGTCCTAGCTAGG +
Preference number: 3 (lower is better)
Translates to: DYRCELLYPAGQAHFCLRCGSCG*SSVLAR
Trigger: CCTAGCTAGGACAGATGACAAACCGCAAGAGCCACA...CCTGAGACAGAAATGTGCCTGGCCGGCTGGGTACAGTAACTCACATCTGTAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
3UTR TCA 72 bp TTCAGATCAAATGTTGCCCTCTCAGTGAGATCCCCCTaGAAATTGAAACTGCTCTCTCACCGTCCCTGCGTT +
Preference number: 3 (lower is better)
Translates to: FRSNVALSVRSP*KLKLLSHRPCV
Trigger: AACGCAGGGACGGTGAGAGAGCAGTTTCAATTTTCAGGGGGATCTCACTGAGAGGGCAACATTTGATCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
3UTR CCA 72 bp AAGAAGGGAAAGAAAGGAAGGAAAGAGGGAAGGAACTaGCAAGTCTGTGGCTCTTGCGGTTTGTCATCTGTC +
Preference number: 3 (lower is better)
Translates to: KKGKKGRKEGRN*QVCGSCGLSSV
Trigger: GACAGATGACAAACCGCAAGAGCCACAGACTTGCCAGTTCCTTCCCTCTTTCCTTCCTTTCTTTCCCTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
3UTR CCA 72 bp AACCAACTCATTTATCGTGATTTTTGTCCAACTCTCTaGTTAGGATGTCAGCTCTGTGAGGGCCGAGATCTC +
Preference number: 3 (lower is better)
Translates to: NQLIYRDFCPTL*LGCQLCEGRDL
Trigger: GAGATCTCGGCCCTCACAGAGCTGACATCCTAACCAGAGAGTTGGACAAAAATCACGATAAATGAGTTGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR GCA 90 bp CCGCCATCCCTAGAGGTACATCCTCCGGCCAAACAGGGGTCTCACCACCCAGACCCTGCTGGGTGTCCCTaGGCAGCCGGGGGACGGCCT +
Preference number: 4 (lower is better)
Translates to: PPSLEVHPPAKQGSHHPDPAGCP*AAGGRP
Trigger: AGGCCGTCCCCCGGCTGCGCAGGGACACCCAGCAGG...GTCTGGGTGGTGAGACCCCTGTTTGGCCGGAGGATGTACCTCTAGGGATGGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594229.1
ENST00000601575.5
CDS-3UTR CCA 90 bp CCACAGCCAGCCAGGACTCCCACCTCTCCAGGAGGGAACAGCTGCCCCAGCTCCACGGTTGTGCCCACCTaGCGATGCCCTTGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: PQPARTPTSPGGNSCPSSTVVPT*RCPCQV
Trigger: CACCTGGCAAGGGCATCGCCAGGTGGGCACAACCGT...GGAGCTGGGGCAGCTGTTCCCTCCTGGAGAGGTGGGAGTCCTGGCTGGCTGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR TCA 90 bp CCACAGCCAGCCAGGACTCCCACCTCTCCAGGAGGGAACAGCTGCCCCAGCTCCAAGCCTCTTCATTCCTaGAGCCCCGTGGGCACCTCG +
Preference number: 4 (lower is better)
Translates to: PQPARTPTSPGGNSCPSSKPLHS*SPVGTS
Trigger: CGAGGTGCCCACGGGGCTTCAGGAATGAAGAGGCTT...GGAGCTGGGGCAGCTGTTCCCTCCTGGAGAGGTGGGAGTCCTGGCTGGCTGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR TCA 90 bp GATGTGCAGCCGCGTATACCCGTACTCCTTCACACGCACGGCACTCCAGGGCCTCCCGCCTCAGCCTCCTaGGCAGCTGGGACTACAGGC +
Preference number: 4 (lower is better)
Translates to: DVQPRIPVLLHTHGTPGPPASAS*AAGTTG
Trigger: GCCTGTAGTCCCAGCTGCTCAGGAGGCTGAGGCGGG...AGGCCCTGGAGTGCCGTGCGTGTGAAGGAGTACGGGTATACGCGGCTGCACATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601575.5
CDS-3UTR GCA 90 bp GGAGGAGAGCTGCCGCCATCCCTAGAGGTACATCCTCCGGCCAAACAGGGGTCTCAAAGGGGACGAAGGTaGCCTGGGCGCGGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: GGELPPSLEVHPPAKQGSQRGRR*PGRGGA
Trigger: TGCCCCTCCGCGCCCAGGGCACCTTCGTCCCCTTTG...AGACCCCTGTTTGGCCGGAGGATGTACCTCTAGGGATGGCGGCAGCTCTCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000594229.1
ENST00000601575.5
CDS-3UTR GCA 90 bp CTGCCGCCATCCCTAGAGGTACATCCTCCGGCCAAACAGGGGTCTCACCACCCACTGTGCCCGCACACCTaGCCTCCCTCCACAGCCAGC +
Preference number: 4 (lower is better)
Translates to: LPPSLEVHPPAKQGSHHPLCPHT*PPSTAS
Trigger: GCTGGCTGTGGAGGGAGGGCAGGTGTGCGGGCACAG...TGGGTGGTGAGACCCCTGTTTGGCCGGAGGATGTACCTCTAGGGATGGCGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601575.5
CDS-3UTR GCA 90 bp GGATGTGCAGCCGCGTATACCCGTACTCCTTCACACGCACGGCACTCCAGGGCCAGGAGGGTGGGGCCCTaGCAGCAGAAACCTGCCGTG +
Preference number: 4 (lower is better)
Translates to: GCAAAYTRTPSHARHSRARRVGP*QQKPAV
Trigger: CACGGCAGGTTTCTGCTGGCAGGGCCCCACCCTCCT...GGCCCTGGAGTGCCGTGCGTGTGAAGGAGTACGGGTATACGCGGCTGCACATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601575.5
CDS-3UTR GCA 90 bp CCACAGCCAGCCAGGACTCCCACCTCTCCAGGAGGGAACAGCTGCCCCAGCTCCCTTCCCCCAGATGTCTaGCCACTTGGCTCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: PQPARTPTSPGGNSCPSSLPPDV*PLGSFP
Trigger: GGGGAAGGAGCCAAGTGGGCAGACATCTGGGGGAAG...GGAGCTGGGGCAGCTGTTCCCTCCTGGAGAGGTGGGAGTCCTGGCTGGCTGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CCA 90 bp CCACAGCCAGCCAGGACTCCCACCTCTCCAGGAGGGAACAGCTGCCCCAGCTCCCAGGCTGGGGTGCAGTaGCGCAATCATGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: PQPARTPTSPGGNSCPSSQAGVQ*RNHGSL
Trigger: CAGTGAGCCATGATTGCGCCACTGCACCCCAGCCTG...GGAGCTGGGGCAGCTGTTCCCTCCTGGAGAGGTGGGAGTCCTGGCTGGCTGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR TCA 90 bp CTGGTGAGTAGTGTCATGACGGTTGTGCCCACCTGGCGATGCCCTTGCCAGGTGCCCGCCTCAGCCTCCTaGGCAGCTGGGACTACAGGC +
Preference number: 4 (lower is better)
Translates to: LVSSVMTVVPTWRCPCQVPASAS*AAGTTG
Trigger: GCCTGTAGTCCCAGCTGCTCAGGAGGCTGAGGCGGG...CACCTGGCAAGGGCATCGCCAGGTGGGCACAACCGTCATGACACTACTCACCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR GCA 90 bp CCTGGAATGCTCTTCCCCCAGATGTCTGCCCACTTGGCTCCTTCCCCACCTCCTCAAAGGGGACGAAGGTaGCCTGGGCGCGGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: PGMLFPQMSAHLAPSPPPQRGRR*PGRGGA
Trigger: TGCCCCTCCGCGCCCAGGGCACCTTCGTCCCCTTTG...AGGAGGTGGGGAAGGAGCCAAGTGGGCAGACATCTGGGGGAAGAGCATTCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR GCA 90 bp CTGGTGAGTAGTGTCATGACGGTTGTGCCCACCTGGCGATGCCCTTGCCAGGTGCTGTGCCCGCACACCTaGCCTCCCTCCACAGCCAGC +
Preference number: 4 (lower is better)
Translates to: LVSSVMTVVPTWRCPCQVLCPHT*PPSTAS
Trigger: GCTGGCTGTGGAGGGAGGGCAGGTGTGCGGGCACAG...CACCTGGCAAGGGCATCGCCAGGTGGGCACAACCGTCATGACACTACTCACCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR GCA 90 bp GCAGGAGAGGAGGAAGCCCAGCGGCATCCCCCGCAGATGTGCAGAATCCATGGAGCCCGATCAGAGCTATaGAGGAGGGTGGGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: AGEEEAQRHPPQMCRIHGARSEL*RRVGPC
Trigger: GCAGGGCCCCACCCTCCTGCATAGCTCTGATCGGGC...TCCATGGATTCTGCACATCTGCGGGGGATGCCGCTGGGCTTCCTCCTCTCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CCA 90 bp GGAGGAGAGCTGCCGCCATCCCTAGAGGTACATCCTCCGGCCAAACAGGGGTCTCAGATGGACTTGCTCTaGGGCAGCGCTGGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: GGELPPSLEVHPPAKQGSQMDLL*GSAGSP
Trigger: GGGGCTCCCAGCGCTGCCCCAGAGCAAGTCCATCTG...AGACCCCTGTTTGGCCGGAGGATGTACCTCTAGGGATGGCGGCAGCTCTCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594229.1
ENST00000601575.5
CDS-3UTR CCA 90 bp CCACAGCCAGCCAGGACTCCCACCTCTCCAGGAGGGAACAGCTGCCCCAGCTCCCGTCCAGATCTGCGTTaGAGCAGTACATGGGCCGGT +
Preference number: 4 (lower is better)
Translates to: PQPARTPTSPGGNSCPSSRPDLR*SSTWAG
Trigger: ACCGGCCCATGTACTGCTCCAACGCAGATCTGGACG...GGAGCTGGGGCAGCTGTTCCCTCCTGGAGAGGTGGGAGTCCTGGCTGGCTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CCA 90 bp CCGCCATCCCTAGAGGTACATCCTCCGGCCAAACAGGGGTCTCACCACCCAGACCAGGCCCTCGCGGGTTaGTGTAGGGCATCTCTCGGC +
Preference number: 4 (lower is better)
Translates to: PPSLEVHPPAKQGSHHPDQALAG*CRASLG
Trigger: GCCGAGAGATGCCCTACACCAACCCGCGAGGGCCTG...GTCTGGGTGGTGAGACCCCTGTTTGGCCGGAGGATGTACCTCTAGGGATGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594229.1
ENST00000601575.5
CDS-3UTR GCA 90 bp CCACAGCCAGCCAGGACTCCCACCTCTCCAGGAGGGAACAGCTGCCCCAGCTCCAGGATGATCAGGCAGTaGTCTGGGGGACAACAGAGG +
Preference number: 4 (lower is better)
Translates to: PQPARTPTSPGGNSCPSSRMIRQ*SGGQQR
Trigger: CCTCTGTTGTCCCCCAGAGCACTGCCTGATCATCCT...GGAGCTGGGGCAGCTGTTCCCTCCTGGAGAGGTGGGAGTCCTGGCTGGCTGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR GCA 90 bp AGGCCTGGGCAGTTTCTGGTCACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGCAAAGGGGACGAAGGTaGCCTGGGCGCGGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: RPGQFLVTAAKAAKPRLLQRGRR*PGRGGA
Trigger: TGCCCCTCCGCGCCCAGGGCACCTTCGTCCCCTTTG...CAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGTGACCAGAAACTGCCCAGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR GCA 90 bp AGGAGGAAGCCCAGCGGCATCCCCCGCAGATGTGCAGAATCCATGGAGCCAGAGGCTTCCGCCGGAGAATaGCCCCGTCCACAAAGGGGA +
Preference number: 4 (lower is better)
Translates to: RRKPSGIPRRCAESMEPEASAGE*PRPQRG
Trigger: TCCCCTTTGTGGACGGGGGCATTCTCCGGCGGAAGC...CTCTGGCTCCATGGATTCTGCACATCTGCGGGGGATGCCGCTGGGCTTCCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR GCA 90 bp GGAGAGCTGCCGCCATCCCTAGAGGTACATCCTCCGGCCAAACAGGGGTCTCACGCTTCCGCCGGAGAATaGCCCCGTCCACAAAGGGGA +
Preference number: 4 (lower is better)
Translates to: GELPPSLEVHPPAKQGSHASAGE*PRPQRG
Trigger: TCCCCTTTGTGGACGGGGGCATTCTCCGGCGGAAGC...GTGAGACCCCTGTTTGGCCGGAGGATGTACCTCTAGGGATGGCGGCAGCTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000594229.1
ENST00000601575.5
CDS-3UTR GCA 90 bp CAGAATCCATGGAGCCAGAGCTTAAGCCTCTTCATTCCTGAAGCCCCGTGGGCACCTGCTGGGTGTCCCTaGGCAGCCGGGGGACGGCCT +
Preference number: 4 (lower is better)
Translates to: QNPWSQSLSLFIPEAPWAPAGCP*AAGGRP
Trigger: AGGCCGTCCCCCGGCTGCGCAGGGACACCCAGCAGG...TGCCCACGGGGCTTCAGGAATGAAGAGGCTTAAGCTCTGGCTCCATGGATTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR GCA 90 bp CAGACATCATCTACGATCTTCCCATCCTGGTCGTCCGACACCTGCTGGATGTGGCCTGCTGGGTGTCCCTaGGCAGCCGGGGGACGGCCT +
Preference number: 4 (lower is better)
Translates to: QTSSTIFPSWSSDTCWMWPAGCP*AAGGRP
Trigger: AGGCCGTCCCCCGGCTGCGCAGGGACACCCAGCAGG...CCACATCCAGCAGGTGTCGGACGACCAGGATGGGAAGATCGTAGATGATGTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601575.5
CDS-3UTR GCA 90 bp CCGCCATCCCTAGAGGTACATCCTCCGGCCAAACAGGGGTCTCACCACCCAGACGCGTCATACATGCCCTaGTGGGTGTCCCTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: PPSLEVHPPAKQGSHHPDASYMP*WVSLRS
Trigger: GCTGCGCAGGGACACCCAGCAGGGCATGTATGACGC...GTCTGGGTGGTGAGACCCCTGTTTGGCCGGAGGATGTACCTCTAGGGATGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594229.1
ENST00000601575.5
CDS-3UTR GCA 90 bp CCACAGCCAGCCAGGACTCCCACCTCTCCAGGAGGGAACAGCTGCCCCAGCTCCCAGTACATGGGCCGGTaGCCCATAGTGATGATCCAC +
Preference number: 4 (lower is better)
Translates to: PQPARTPTSPGGNSCPSSQYMGR*PIVMIH
Trigger: GTGGATCATCACTATGGGGCACCGGCCCATGTACTG...GGAGCTGGGGCAGCTGTTCCCTCCTGGAGAGGTGGGAGTCCTGGCTGGCTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR GCA 90 bp CTGGTGAGTAGTGTCATGACGGTTGTGCCCACCTGGCGATGCCCTTGCCAGGTGCCGTGTGTCACTCTGTaGCCGCACACCTGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: LVSSVMTVVPTWRCPCQVPCVTL*PHTCPP
Trigger: GGGAGGGCAGGTGTGCGGGCACAGAGTGACACACGG...CACCTGGCAAGGGCATCGCCAGGTGGGCACAACCGTCATGACACTACTCACCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR GCA 90 bp CCTCTGCCTGGAATGCTCTTCCCCCAGATGTCTGCCCACTTGGCTCCTTCCCCACCGTGTGTCACTCTGTaGCCGCACACCTGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: PLPGMLFPQMSAHLAPSPPCVTL*PHTCPP
Trigger: GGGAGGGCAGGTGTGCGGGCACAGAGTGACACACGG...TGGGGAAGGAGCCAAGTGGGCAGACATCTGGGGGAAGAGCATTCCAGGCAGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR GCA 90 bp TCCTCTGCCTGGAATGCTCTTCCCCCAGATGTCTGCCCACTTGGCTCCTTCCCCGCCCGATCAGAGCTATaGAGGAGGGTGGGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: SSAWNALPPDVCPLGSFPARSEL*RRVGPC
Trigger: GCAGGGCCCCACCCTCCTGCATAGCTCTGATCGGGC...GGGGAAGGAGCCAAGTGGGCAGACATCTGGGGGAAGAGCATTCCAGGCAGAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CCA 90 bp TCCTCTGCCTGGAATGCTCTTCCCCCAGATGTCTGCCCACTTGGCTCCTTCCCCCAGATGGACTTGCTCTaGGGCAGCGCTGGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: SSAWNALPPDVCPLGSFPQMDLL*GSAGSP
Trigger: GGGGCTCCCAGCGCTGCCCCAGAGCAAGTCCATCTG...GGGGAAGGAGCCAAGTGGGCAGACATCTGGGGGAAGAGCATTCCAGGCAGAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CCA 90 bp CCTCTGCCTGGAATGCTCTTCCCCCAGATGTCTGCCCACTTGGCTCCTTCCCCACAGGCCCTCGCGGGTTaGTGTAGGGCATCTCTCGGC +
Preference number: 4 (lower is better)
Translates to: PLPGMLFPQMSAHLAPSPQALAG*CRASLG
Trigger: GCCGAGAGATGCCCTACACCAACCCGCGAGGGCCTG...TGGGGAAGGAGCCAAGTGGGCAGACATCTGGGGGAAGAGCATTCCAGGCAGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CCA 90 bp GCCGCCATCCCTAGAGGTACATCCTCCGGCCAAACAGGGGTCTCACCACCCAGAGGCCTGGGCAGTTTCTaGTCACAGCAGCCAAGGCGG +
Preference number: 4 (lower is better)
Translates to: AAIPRGTSSGQTGVSPPRGLGSF*SQQPRR
Trigger: CCGCCTTGGCTGCTGTGACCAGAAACTGCCCAGGCC...TCTGGGTGGTGAGACCCCTGTTTGGCCGGAGGATGTACCTCTAGGGATGGCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601575.5
CDS-3UTR CCA 90 bp AGGAGGAAGCCCAGCGGCATCCCCCGCAGATGTGCAGAATCCATGGAGCCAGAGCTCCCCACCCAGGCCTaGGCAGTTTCTGGTCACAGC +
Preference number: 4 (lower is better)
Translates to: RRKPSGIPRRCAESMEPELPTQA*AVSGHS
Trigger: GCTGTGACCAGAAACTGCCCAGGCCTGGGTGGGGAG...CTCTGGCTCCATGGATTCTGCACATCTGCGGGGGATGCCGCTGGGCTTCCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CCA 90 bp GGATGTGCAGCCGCGTATACCCGTACTCCTTCACACGCACGGCACTCCAGGGCCGACCCAGATCCCAGCTaGAGGAGTCAAAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GCAAAYTRTPSHARHSRADPDPS*RSQRAG
Trigger: CCCTGCCCTTTGACTCCTCCAGCTGGGATCTGGGTC...GGCCCTGGAGTGCCGTGCGTGTGAAGGAGTACGGGTATACGCGGCTGCACATCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601575.5
CDS-3UTR TCA 90 bp AGCCGCGTATACCCGTACTCCTTCACACGCACGGCACTCCAGGGCCTCGGGAAGGCAGTCCTGGAGCAGTaGAGAAGGAGCCAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: SRVYPYSFTRTALQGLGKAVLEQ*RRSQAS
Trigger: TGAAGCCTGGCTCCTTCTTCACTGCTCCAGGACTGC...CTTCCCGAGGCCCTGGAGTGCCGTGCGTGTGAAGGAGTACGGGTATACGCGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601575.5
CDS-3UTR TCA 90 bp GGATGTGCAGCCGCGTATACCCGTACTCCTTCACACGCACGGCACTCCAGGGCCGCCAGGCTGGGAAACTaGGGCATGAAGGGACTCTTC +
Preference number: 4 (lower is better)
Translates to: GCAAAYTRTPSHARHSRAARLGN*GMKGLF
Trigger: GAAGAGTCCCTTCATGCCTCAGTTTCCCAGCCTGGC...GGCCCTGGAGTGCCGTGCGTGTGAAGGAGTACGGGTATACGCGGCTGCACATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601575.5
CDS-3UTR TCA 90 bp CTGAAGCCCCGTGGGCACCTCGCCCGATCAGAGCTATGCAGGAGGGTGGGGCCCGATCCCCCTGAAAATTaGAACTGCTCTCTCACCGTC +
Preference number: 4 (lower is better)
Translates to: LKPRGHLARSELCRRVGPDPPEN*NCSLTV
Trigger: GACGGTGAGAGAGCAGTTTCAATTTTCAGGGGGATC...GGGCCCCACCCTCCTGCATAGCTCTGATCGGGCGAGGTGCCCACGGGGCTTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR GCA 90 bp CAGAGCTTAAGCCTCTTCATTCCTGAAGCCCCGTGGGCACCTCGCCCGATCAGAAGGAGGGTGGGGCCCTaGCAGCAGAAACCTGCCGTG +
Preference number: 4 (lower is better)
Translates to: QSLSLFIPEAPWAPRPIRRRVGP*QQKPAV
Trigger: CACGGCAGGTTTCTGCTGGCAGGGCCCCACCCTCCT...TCTGATCGGGCGAGGTGCCCACGGGGCTTCAGGAATGAAGAGGCTTAAGCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR GCA 90 bp TCACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGGAGGAGAGCTGCCGCCATCACCTGGCGATGCCCTTaGCAGGTGGGCAGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: SQQPRRQNLGFWRRAAAITWRCP*QVGRRG
Trigger: TCCTCTCCTGCCCACCTGGCAAGGGCATCGCCAGGT...GATGGCGGCAGCTCTCCTCCAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR GCA 90 bp CCACAGCCAGCCAGGACTCCCACCTCTCCAGGAGGGAACAGCTGCCCCAGCTCCTTCCTCTGCCTGGAATaGTCTTCCCCCAGATGTCTG +
Preference number: 4 (lower is better)
Translates to: PQPARTPTSPGGNSCPSSFLCLE*SSPRCL
Trigger: CAGACATCTGGGGGAAGAGCATTCCAGGCAGAGGAA...GGAGCTGGGGCAGCTGTTCCCTCCTGGAGAGGTGGGAGTCCTGGCTGGCTGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR GCA 90 bp TGGGTCCCGTTGAGGATGTGCAGCCGCGTATACCCGTACTCCTTCACACGCACGGGACCAGGGCTCCCCTaGATCTCCCATCCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: WVPLRMCSRVYPYSFTRTGPGLP*ISHPSG
Trigger: CCCTGAAGGATGGGAGATGCAGGGGAGCCCTGGTCC...CGTGCGTGTGAAGGAGTACGGGTATACGCGGCTGCACATCCTCAACGGGACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601575.5
CDS-3UTR CCA 90 bp GTCACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGGAGGAGAGCTGCCGCCATAGACGGGGACTCCAGTaGGCCCCATTCTTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: VTAAKAAKPRLLEESCRHRRGLQ*APFLRA
Trigger: GGCCCTCAAGAATGGGGCCCACTGGAGTCCCCGTCT...ATGGCGGCAGCTCTCCTCCAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331256.10
ENST00000594229.1
ENST00000601575.5
CDS-3UTR CCA 90 bp CTGAAGCCCCGTGGGCACCTCGCCCGATCAGAGCTATGCAGGAGGGTGGGGCCCTTCTTATTGGCTTTCTaGAGGTCGCTCTCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: LKPRGHLARSELCRRVGPFLLAF*RSLSSQ
Trigger: CTGGCTGGAGAGCGACCTCCAGAAAGCCAATAAGAA...GGGCCCCACCCTCCTGCATAGCTCTGATCGGGCGAGGTGCCCACGGGGCTTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CCA 90 bp TCACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGGAGGAGAGCTGCCGCCATCGGCCTGGGCAGTTTCTaGTCACAGCAGCCAAGGCGG +
Preference number: 4 (lower is better)
Translates to: SQQPRRQNLGFWRRAAAIGLGSF*SQQPRR
Trigger: CCGCCTTGGCTGCTGTGACCAGAAACTGCCCAGGCC...GATGGCGGCAGCTCTCCTCCAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR GCA 90 bp CAGAGCTTAAGCCTCTTCATTCCTGAAGCCCCGTGGGCACCTCGCCCGATCAGAGCTTCCGCCGGAGAATaGCCCCGTCCACAAAGGGGA +
Preference number: 4 (lower is better)
Translates to: QSLSLFIPEAPWAPRPIRASAGE*PRPQRG
Trigger: TCCCCTTTGTGGACGGGGGCATTCTCCGGCGGAAGC...TCTGATCGGGCGAGGTGCCCACGGGGCTTCAGGAATGAAGAGGCTTAAGCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR GCA 90 bp TCTGGAGGAGAGCTGCCGCCATCCCTAGAGGTACATCCTCCGGCCAAACAGGGGTCCAGCCAGCGAAACTaGCTCTGTACCAAGTGGCGG +
Preference number: 4 (lower is better)
Translates to: SGGELPPSLEVHPPAKQGSSQRN*LCTKWR
Trigger: CCGCCACTTGGTACAGAGGCAGTTTCGCTGGCTGGA...CCCCTGTTTGGCCGGAGGATGTACCTCTAGGGATGGCGGCAGCTCTCCTCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594229.1
ENST00000601575.5
CDS-3UTR GCA 90 bp GGAGAGCTGCCGCCATCCCTAGAGGTACATCCTCCGGCCAAACAGGGGTCTCACGATCCACGGCCGGGCTaGCCGGTTCTTATTGGCTTT +
Preference number: 4 (lower is better)
Translates to: GELPPSLEVHPPAKQGSHDPRPG*PVLIGF
Trigger: AAAGCCAATAAGAACCGGGCAGCCCGGCCGTGGATC...GTGAGACCCCTGTTTGGCCGGAGGATGTACCTCTAGGGATGGCGGCAGCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594229.1
ENST00000601575.5
CDS-3UTR GCA 90 bp AGGAGGAAGCCCAGCGGCATCCCCCGCAGATGTGCAGAATCCATGGAGCCAGAGCCAACCCGTACAGCTTaGCTTGGAGGCCTTTGCGGA +
Preference number: 4 (lower is better)
Translates to: RRKPSGIPRRCAESMEPEPTRTA*LGGLCG
Trigger: TCCGCAAAGGCCTCCAAGGCAAGCTGTACGGGTTGG...CTCTGGCTCCATGGATTCTGCACATCTGCGGGGGATGCCGCTGGGCTTCCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR GCA 90 bp CCGCCATCCCTAGAGGTACATCCTCCGGCCAAACAGGGGTCTCACCACCCAGACCCAACCCGTACAGCTTaGCTTGGAGGCCTTTGCGGA +
Preference number: 4 (lower is better)
Translates to: PPSLEVHPPAKQGSHHPDPTRTA*LGGLCG
Trigger: TCCGCAAAGGCCTCCAAGGCAAGCTGTACGGGTTGG...GTCTGGGTGGTGAGACCCCTGTTTGGCCGGAGGATGTACCTCTAGGGATGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594229.1
ENST00000601575.5
CDS-3UTR GCA 90 bp GGGCAGTTTCTGGTCACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGGAGGAGCCAGGAGGGAACAGCTaGCCCAGCTCCATAGGGCTG +
Preference number: 4 (lower is better)
Translates to: GQFLVTAAKAAKPRLLEEPGGNS*PSSIGL
Trigger: CAGCCCTATGGAGCTGGGGCAGCTGTTCCCTCCTGG...CTCCTCCAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGTGACCAGAAACTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR GCA 90 bp CAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGGAGGAGAGCTGCCGCCATCCCTCTGCCAGCAGAAACCTaGCGTGTGTCACTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: QQPRRQNLGFWRRAAAIPLPAET*RVSLCA
Trigger: GGCACAGAGTGACACACGGCAGGTTTCTGCTGGCAG...AGGGATGGCGGCAGCTCTCCTCCAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601575.5
CDS-3UTR GCA 90 bp ACTGTACCCAGCCGGCCAGGCACATTTCTGTCTCAGGGCCTTTGCACTGGCTGTACCTGGCGATGCCCTTaGCAGGTGGGCAGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: TVPSRPGTFLSQGLCTGCTWRCP*QVGRRG
Trigger: TCCTCTCCTGCCCACCTGGCAAGGGCATCGCCAGGT...ACAGCCAGTGCAAAGGCCCTGAGACAGAAATGTGCCTGGCCGGCTGGGTACAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR GCA 90 bp TGGGTCCCGTTGAGGATGTGCAGCCGCGTATACCCGTACTCCTTCACACGCACGCTTCCCCCAGATGTCTaGCCACTTGGCTCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: WVPLRMCSRVYPYSFTRTLPPDV*PLGSFP
Trigger: GGGGAAGGAGCCAAGTGGGCAGACATCTGGGGGAAG...CGTGCGTGTGAAGGAGTACGGGTATACGCGGCTGCACATCCTCAACGGGACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601575.5
CDS-3UTR CCA 90 bp CTGGTGAGTAGTGTCATGACGGTTGTGCCCACCTGGCGATGCCCTTGCCAGGTGGATCAGGCAGTGCTCTaGGGGACAACAGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: LVSSVMTVVPTWRCPCQVDQAVL*GTTEAG
Trigger: CCCTGCCTCTGTTGTCCCCCAGAGCACTGCCTGATC...CACCTGGCAAGGGCATCGCCAGGTGGGCACAACCGTCATGACACTACTCACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CCA 90 bp ACTGTACCCAGCCGGCCAGGCACATTTCTGTCTCAGGGCCTTTGCACTGGCTGTGCCCCCAGGGACCCCTaGACTCCCAAGGAGAATAGC +
Preference number: 4 (lower is better)
Translates to: TVPSRPGTFLSQGLCTGCAPRDP*TPKENS
Trigger: GCTATTCTCCTTGGGAGTCCAGGGGTCCCTGGGGGC...ACAGCCAGTGCAAAGGCCCTGAGACAGAAATGTGCCTGGCCGGCTGGGTACAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CCA 90 bp AGGCCTGGGCAGTTTCTGGTCACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGAGACGGGGACTCCAGTaGGCCCCATTCTTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: RPGQFLVTAAKAAKPRLLRRGLQ*APFLRA
Trigger: GGCCCTCAAGAATGGGGCCCACTGGAGTCCCCGTCT...CAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGTGACCAGAAACTGCCCAGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CCA 90 bp GGGCAGTTTCTGGTCACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGGAGGAGAGACGGGGACTCCAGTaGGCCCCATTCTTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: GQFLVTAAKAAKPRLLEERRGLQ*APFLRA
Trigger: GGCCCTCAAGAATGGGGCCCACTGGAGTCCCCGTCT...CTCCTCCAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGTGACCAGAAACTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CCA 90 bp GCCATCCCTAGAGGTACATCCTCCGGCCAAACAGGGGTCTCACCACCCAGACATTCATACATGCCCTGCTaGGTGTCCCTGCGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: AIPRGTSSGQTGVSPPRHSYMPC*VSLRSR
Trigger: CCGGCTGCGCAGGGACACCCAGCAGGGCATGTATGA...ATGTCTGGGTGGTGAGACCCCTGTTTGGCCGGAGGATGTACCTCTAGGGATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594229.1
ENST00000601575.5
CDS-3UTR CCA 90 bp CAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGGAGGAGAGCTGCCGCCATCCCTGAGAAGGAGATGATGTaGGCGGGACCCAGATCCCAG +
Preference number: 4 (lower is better)
Translates to: QQPRRQNLGFWRRAAAIPEKEMM*AGPRSQ
Trigger: CTGGGATCTGGGTCCCGCCCACATCATCTCCTTCTC...AGGGATGGCGGCAGCTCTCCTCCAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594229.1
ENST00000601575.5
CDS-3UTR CCA 90 bp AGAGGAGGAAGCCCAGCGGCATCCCCCGCAGATGTGCAGAATCCATGGAGCCAGCGTCCAGATCTGCGTTaGAGCAGTACATGGGCCGGT +
Preference number: 4 (lower is better)
Translates to: RGGSPAASPADVQNPWSQRPDLR*SSTWAG
Trigger: ACCGGCCCATGTACTGCTCCAACGCAGATCTGGACG...CTGGCTCCATGGATTCTGCACATCTGCGGGGGATGCCGCTGGGCTTCCTCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CCA 90 bp CAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGGAGGAGAGCTGCCGCCATCCCTCCGTACAGCTTGCCTTaGAGGCCTTTGCGGACCTTG +
Preference number: 4 (lower is better)
Translates to: QQPRRQNLGFWRRAAAIPPYSLP*RPLRTL
Trigger: CAAGGTCCGCAAAGGCCTCCAAGGCAAGCTGTACGG...AGGGATGGCGGCAGCTCTCCTCCAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594229.1
ENST00000601575.5
CDS-3UTR CCA 90 bp ACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGGAGGAGAGCTGCCGCCATCCCCCGTACAGCTTGCCTTaGAGGCCTTTGCGGACCTTG +
Preference number: 4 (lower is better)
Translates to: TAAKAAKPRLLEESCRHPPYSLP*RPLRTL
Trigger: CAAGGTCCGCAAAGGCCTCCAAGGCAAGCTGTACGG...GGGATGGCGGCAGCTCTCCTCCAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594229.1
ENST00000601575.5
CDS-3UTR CCA 90 bp AGAGGAGGAAGCCCAGCGGCATCCCCCGCAGATGTGCAGAATCCATGGAGCCAGGATCCTGTGATGATGTaGACAGGCCCTCGCGGGTTG +
Preference number: 4 (lower is better)
Translates to: RGGSPAASPADVQNPWSQDPVMM*TGPRGL
Trigger: CAACCCGCGAGGGCCTGTCCACATCATCACAGGATC...CTGGCTCCATGGATTCTGCACATCTGCGGGGGATGCCGCTGGGCTTCCTCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CCA 90 bp TGGTCACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGGAGGAGAGCTGCCGCCGATCCTGTGATGATGTaGACAGGCCCTCGCGGGTTG +
Preference number: 4 (lower is better)
Translates to: WSQQPRRQNLGFWRRAAADPVMM*TGPRGL
Trigger: CAACCCGCGAGGGCCTGTCCACATCATCACAGGATC...GGCGGCAGCTCTCCTCCAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGTGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331256.10
ENST00000594229.1
ENST00000601575.5
CDS-3UTR CCA 90 bp GCCATCCCTAGAGGTACATCCTCCGGCCAAACAGGGGTCTCACCACCCAGACATACGGTTGTGCCCACCTaGCGATGCCCTTGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: AIPRGTSSGQTGVSPPRHTVVPT*RCPCQV
Trigger: CACCTGGCAAGGGCATCGCCAGGTGGGCACAACCGT...ATGTCTGGGTGGTGAGACCCCTGTTTGGCCGGAGGATGTACCTCTAGGGATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601575.5
CDS-3UTR TCA 90 bp CTGCCGCCATCCCTAGAGGTACATCCTCCGGCCAAACAGGGGTCTCACCACCCAGCAGCTTGCGAAGCGTaGCTCGGTGTATGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: LPPSLEVHPPAKQGSHHPAACEA*LGVCRA
Trigger: AGCTCTACATACACCGAGTCACGCTTCGCAAGCTGC...TGGGTGGTGAGACCCCTGTTTGGCCGGAGGATGTACCTCTAGGGATGGCGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594229.1
ENST00000601575.5
CDS-3UTR TCA 90 bp TCTGGAGGAGAGCTGCCGCCATCCCTAGAGGTACATCCTCCGGCCAAACAGGGGTCATACGAGTGCTCATaGGCCCACAGCTGCAGATCC +
Preference number: 4 (lower is better)
Translates to: SGGELPPSLEVHPPAKQGSYECS*AHSCRS
Trigger: GGATCTGCAGCTGTGGGCTCATGAGCACTCGTATGA...CCCCTGTTTGGCCGGAGGATGTACCTCTAGGGATGGCGGCAGCTCTCCTCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594229.1
ENST00000601575.5
CDS-3UTR GCA 90 bp GCAGGAGAGGAGGAAGCCCAGCGGCATCCCCCGCAGATGTGCAGAATCCATGGAAGGATGATCAGGCAGTaGTCTGGGGGACAACAGAGG +
Preference number: 4 (lower is better)
Translates to: AGEEEAQRHPPQMCRIHGRMIRQ*SGGQQR
Trigger: CCTCTGTTGTCCCCCAGAGCACTGCCTGATCATCCT...TCCATGGATTCTGCACATCTGCGGGGGATGCCGCTGGGCTTCCTCCTCTCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR GCA 90 bp GTCACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGGAGGAGAGCTGCCGCCATGGCTGCAACCCGAATTaGACTTCAGAGCGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: VTAAKAAKPRLLEESCRHGCNPN*TSERVG
Trigger: CCCAACCCGCTCTGAAGTGCAATTCGGGTTGCAGCC...ATGGCGGCAGCTCTCCTCCAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331256.10
ENST00000594229.1
ENST00000601575.5
CDS-3UTR GCA 90 bp GGGCAGTTTCTGGTCACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGGAGGAGAGGGGCCCCGACGGCTaGAACCCGAATTGCACTTCA +
Preference number: 4 (lower is better)
Translates to: GQFLVTAAKAAKPRLLEERGPDG*NPNCTS
Trigger: TGAAGTGCAATTCGGGTTGCAGCCGTCGGGGCCCCT...CTCCTCCAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGTGACCAGAAACTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR GCA 90 bp TCCTCTGCCTGGAATGCTCTTCCCCCAGATGTCTGCCCACTTGGCTCCTTCCCCTCCAGCCAGCGAAACTaGCTCTGTACCAAGTGGCGG +
Preference number: 4 (lower is better)
Translates to: SSAWNALPPDVCPLGSFPSSQRN*LCTKWR
Trigger: CCGCCACTTGGTACAGAGGCAGTTTCGCTGGCTGGA...GGGGAAGGAGCCAAGTGGGCAGACATCTGGGGGAAGAGCATTCCAGGCAGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR GCA 90 bp TCACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGGAGGAGAGCTGCCGCCATCGATCCACGGCCGGGCTaGCCGGTTCTTATTGGCTTT +
Preference number: 4 (lower is better)
Translates to: SQQPRRQNLGFWRRAAAIDPRPG*PVLIGF
Trigger: AAAGCCAATAAGAACCGGGCAGCCCGGCCGTGGATC...GATGGCGGCAGCTCTCCTCCAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331256.10
ENST00000594229.1
ENST00000601575.5
CDS-3UTR GCA 90 bp TGGTCACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGGAGGAGAGCTGCCGCCCAGTACATGGGCCGGTaGCCCATAGTGATGATCCAC +
Preference number: 4 (lower is better)
Translates to: WSQQPRRQNLGFWRRAAAQYMGR*PIVMIH
Trigger: GTGGATCATCACTATGGGGCACCGGCCCATGTACTG...GGCGGCAGCTCTCCTCCAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGTGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331256.10
ENST00000594229.1
ENST00000601575.5
CDS-3UTR GCA 90 bp ACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGGAGGAGAGCTGCCGCCATCCCGCAGTCGTCCAGATCTaGGTTGGAGCAGTACATGGG +
Preference number: 4 (lower is better)
Translates to: TAAKAAKPRLLEESCRHPAVVQI*VGAVHG
Trigger: CCCATGTACTGCTCCAACGCAGATCTGGACGACTGC...GGGATGGCGGCAGCTCTCCTCCAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594229.1
ENST00000601575.5
CDS-3UTR GCA 90 bp GCAGGAGAGGAGGAAGCCCAGCGGCATCCCCCGCAGATGTGCAGAATCCATGGAGCAGTCGTCCAGATCTaGGTTGGAGCAGTACATGGG +
Preference number: 4 (lower is better)
Translates to: AGEEEAQRHPPQMCRIHGAVVQI*VGAVHG
Trigger: CCCATGTACTGCTCCAACGCAGATCTGGACGACTGC...TCCATGGATTCTGCACATCTGCGGGGGATGCCGCTGGGCTTCCTCCTCTCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR GCA 90 bp TCACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGGAGGAGAGCTGCCGCCATCCCAACCCGTACAGCTTaGCTTGGAGGCCTTTGCGGA +
Preference number: 4 (lower is better)
Translates to: SQQPRRQNLGFWRRAAAIPTRTA*LGGLCG
Trigger: TCCGCAAAGGCCTCCAAGGCAAGCTGTACGGGTTGG...GATGGCGGCAGCTCTCCTCCAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331256.10
ENST00000594229.1
ENST00000601575.5
CDS-3UTR GCA 90 bp TCACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGGAGGAGAGCTGCCGCCATCCTGTCTCAGGGCCTTTaGACTGGCTGTTCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: SQQPRRQNLGFWRRAAAILSQGL*TGCSSA
Trigger: GGCAGAGGAACAGCCAGTGCAAAGGCCCTGAGACAG...GATGGCGGCAGCTCTCCTCCAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR GCA 90 bp TTCTGGAGGAGAGCTGCCGCCATCCCTAGAGGTACATCCTCCGGCCAAACAGGGGCTTTCCAGCCTCGCTaGATCTTCCTCCAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: FWRRAAAIPRGTSSGQTGAFQPR*IFLQPS
Trigger: GGAAGGCTGGAGGAAGATGCAGCGAGGCTGGAAAGC...CCCTGTTTGGCCGGAGGATGTACCTCTAGGGATGGCGGCAGCTCTCCTCCAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601575.5
CDS-3UTR GCA 90 bp GCCGCCATCCCTAGAGGTACATCCTCCGGCCAAACAGGGGTCTCACCACCCAGAGGGTGGTTATCCAGGTaGTTTCCAGCCTCGCTGCAT +
Preference number: 4 (lower is better)
Translates to: AAIPRGTSSGQTGVSPPRGWLSR*FPASLH
Trigger: ATGCAGCGAGGCTGGAAAGCACCTGGATAACCACCC...TCTGGGTGGTGAGACCCCTGTTTGGCCGGAGGATGTACCTCTAGGGATGGCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601575.5
CDS-3UTR CCA 90 bp CAGACATCATCTACGATCTTCCCATCCTGGTCGTCCGACACCTGCTGGATGTGGCAGATGGACTTGCTCTaGGGCAGCGCTGGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: QTSSTIFPSWSSDTCWMWQMDLL*GSAGSP
Trigger: GGGGCTCCCAGCGCTGCCCCAGAGCAAGTCCATCTG...CCACATCCAGCAGGTGTCGGACGACCAGGATGGGAAGATCGTAGATGATGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601575.5
CDS-3UTR CCA 90 bp ACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGGAGGAGAGCTGCCGCCATCCCGGAGCCTGGCTCACCTaGGTAAGACAGATGGACTTG +
Preference number: 4 (lower is better)
Translates to: TAAKAAKPRLLEESCRHPGAWLT*VRQMDL
Trigger: CAAGTCCATCTGTCTTACCCAGGTGAGCCAGGCTCC...GGGATGGCGGCAGCTCTCCTCCAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594229.1
ENST00000601575.5
CDS-3UTR CCA 90 bp TTCTGGAGGAGAGCTGCCGCCATCCCTAGAGGTACATCCTCCGGCCAAACAGGGCGTCCAGATCTGCGTTaGAGCAGTACATGGGCCGGT +
Preference number: 4 (lower is better)
Translates to: FWRRAAAIPRGTSSGQTGRPDLR*SSTWAG
Trigger: ACCGGCCCATGTACTGCTCCAACGCAGATCTGGACG...CCCTGTTTGGCCGGAGGATGTACCTCTAGGGATGGCGGCAGCTCTCCTCCAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594229.1
ENST00000601575.5
CDS-3UTR CCA 90 bp CAGAATCCATGGAGCCAGAGCTTAAGCCTCTTCATTCCTGAAGCCCCGTGGGCACAGGCCCTCGCGGGTTaGTGTAGGGCATCTCTCGGC +
Preference number: 4 (lower is better)
Translates to: QNPWSQSLSLFIPEAPWAQALAG*CRASLG
Trigger: GCCGAGAGATGCCCTACACCAACCCGCGAGGGCCTG...TGCCCACGGGGCTTCAGGAATGAAGAGGCTTAAGCTCTGGCTCCATGGATTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CCA 90 bp TTCTGGAGGAGAGCTGCCGCCATCCCTAGAGGTACATCCTCCGGCCAAACAGGGGATCCTGTGATGATGTaGACAGGCCCTCGCGGGTTG +
Preference number: 4 (lower is better)
Translates to: FWRRAAAIPRGTSSGQTGDPVMM*TGPRGL
Trigger: CAACCCGCGAGGGCCTGTCCACATCATCACAGGATC...CCCTGTTTGGCCGGAGGATGTACCTCTAGGGATGGCGGCAGCTCTCCTCCAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594229.1
ENST00000601575.5
CDS-3UTR CCA 90 bp AGGAGGAAGCCCAGCGGCATCCCCCGCAGATGTGCAGAATCCATGGAGCCAGAGCAAAACCTAGGCTTCTaGAGGAGAGCTGCCGCCATC +
Preference number: 4 (lower is better)
Translates to: RRKPSGIPRRCAESMEPEQNLGF*RRAAAI
Trigger: GATGGCGGCAGCTCTCCTCCAGAAGCCTAGGTTTTG...CTCTGGCTCCATGGATTCTGCACATCTGCGGGGGATGCCGCTGGGCTTCCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CCA 90 bp CCGCCATCCCTAGAGGTACATCCTCCGGCCAAACAGGGGTCTCACCACCCAGACCAAAACCTAGGCTTCTaGAGGAGAGCTGCCGCCATC +
Preference number: 4 (lower is better)
Translates to: PPSLEVHPPAKQGSHHPDQNLGF*RRAAAI
Trigger: GATGGCGGCAGCTCTCCTCCAGAAGCCTAGGTTTTG...GTCTGGGTGGTGAGACCCCTGTTTGGCCGGAGGATGTACCTCTAGGGATGGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594229.1
ENST00000601575.5
CDS-3UTR CCA 90 bp TCTGGAGGAGAGCTGCCGCCATCCCTAGAGGTACATCCTCCGGCCAAACAGGGGCAAAACCTAGGCTTCTaGAGGAGAGCTGCCGCCATC +
Preference number: 4 (lower is better)
Translates to: SGGELPPSLEVHPPAKQGQNLGF*RRAAAI
Trigger: GATGGCGGCAGCTCTCCTCCAGAAGCCTAGGTTTTG...CCCCTGTTTGGCCGGAGGATGTACCTCTAGGGATGGCGGCAGCTCTCCTCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594229.1
ENST00000601575.5
CDS-3UTR CCA 90 bp CAGAGCTTAAGCCTCTTCATTCCTGAAGCCCCGTGGGCACCTCGCCCGATCAGAATTCCTGAAGCCCCGTaGGCACCTCGCCCGATCAGA +
Preference number: 4 (lower is better)
Translates to: QSLSLFIPEAPWAPRPIRIPEAP*APRPIR
Trigger: TCTGATCGGGCGAGGTGCCCACGGGGCTTCAGGAAT...TCTGATCGGGCGAGGTGCCCACGGGGCTTCAGGAATGAAGAGGCTTAAGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CCA 90 bp AGGCCTGGGCAGTTTCTGGTCACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGCAGGCTGGGGTGCAGTaGCGCAATCATGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: RPGQFLVTAAKAAKPRLLQAGVQ*RNHGSL
Trigger: CAGTGAGCCATGATTGCGCCACTGCACCCCAGCCTG...CAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGTGACCAGAAACTGCCCAGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR TCA 90 bp GTCACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGGAGGAGAGCTGCCGCCATGCAGCTTGCGAAGCGTaGCTCGGTGTATGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: VTAAKAAKPRLLEESCRHAACEA*LGVCRA
Trigger: AGCTCTACATACACCGAGTCACGCTTCGCAAGCTGC...ATGGCGGCAGCTCTCCTCCAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331256.10
ENST00000594229.1
ENST00000601575.5
CDS-3UTR TCA 90 bp AGGCCTGGGCAGTTTCTGGTCACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGGCCAGGCTGGGAAACTaGGGCATGAAGGGACTCTTC +
Preference number: 4 (lower is better)
Translates to: RPGQFLVTAAKAAKPRLLARLGN*GMKGLF
Trigger: GAAGAGTCCCTTCATGCCTCAGTTTCCCAGCCTGGC...CAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGTGACCAGAAACTGCCCAGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR TCA 90 bp CCTCTGCCTGGAATGCTCTTCCCCCAGATGTCTGCCCACTTGGCTCCTTCCCCACTGTCTCTCCAGCACTaGGAACAGAGCCTGGCACAT +
Preference number: 4 (lower is better)
Translates to: PLPGMLFPQMSAHLAPSPLSLQH*EQSLAH
Trigger: ATGTGCCAGGCTCTGTTCTCAGTGCTGGAGAGACAG...TGGGGAAGGAGCCAAGTGGGCAGACATCTGGGGGAAGAGCATTCCAGGCAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR GCA 90 bp CAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGGAGGAGAGCTGCCGCCATCCCTTCCAGCCCTGCGCACTaGCACAGCGATAAACATACT +
Preference number: 4 (lower is better)
Translates to: QQPRRQNLGFWRRAAAIPSSPAH*HSDKHT
Trigger: AGTATGTTTATCGCTGTGGCAGTGCGCAGGGCTGGA...AGGGATGGCGGCAGCTCTCCTCCAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594229.1
ENST00000601575.5
CDS-3UTR GCA 90 bp CTGCCGCCATCCCTAGAGGTACATCCTCCGGCCAAACAGGGGTCTCACCACCCATCCAGCCCTGCGCACTaGCACAGCGATAAACATACT +
Preference number: 4 (lower is better)
Translates to: LPPSLEVHPPAKQGSHHPSSPAH*HSDKHT
Trigger: AGTATGTTTATCGCTGTGGCAGTGCGCAGGGCTGGA...TGGGTGGTGAGACCCCTGTTTGGCCGGAGGATGTACCTCTAGGGATGGCGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594229.1
ENST00000601575.5
CDS-3UTR GCA 90 bp CAAAACCTAGGCTTCTGGAGGAGAGCTGCCGCCATCCCTAGAGGTACATCCTCCGAACGGCGTCATACATaGCCTGCTGGGTGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: QNLGFWRRAAAIPRGTSSERRHT*PAGCPC
Trigger: GCAGGGACACCCAGCAGGGCATGTATGACGCCGTTC...GGAGGATGTACCTCTAGGGATGGCGGCAGCTCTCCTCCAGAAGCCTAGGTTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594229.1
ENST00000601575.5
CDS-3UTR GCA 90 bp CAGAGCTTAAGCCTCTTCATTCCTGAAGCCCCGTGGGCACCTCGCCCGATCAGATCCAGCCAGCGAAACTaGCTCTGTACCAAGTGGCGG +
Preference number: 4 (lower is better)
Translates to: QSLSLFIPEAPWAPRPIRSSQRN*LCTKWR
Trigger: CCGCCACTTGGTACAGAGGCAGTTTCGCTGGCTGGA...TCTGATCGGGCGAGGTGCCCACGGGGCTTCAGGAATGAAGAGGCTTAAGCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR GCA 90 bp CTGCCGCCATCCCTAGAGGTACATCCTCCGGCCAAACAGGGGTCTCACCACCCAGGCCTTTGCGGACCTTaGTTTCATGTCGTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: LPPSLEVHPPAKQGSHHPGLCGP*FHVVCS
Trigger: ACTGCACACGACATGAAAGCAAGGTCCGCAAAGGCC...TGGGTGGTGAGACCCCTGTTTGGCCGGAGGATGTACCTCTAGGGATGGCGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594229.1
ENST00000601575.5
CDS-3UTR GCA 90 bp TGGTCACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGGAGGAGAGCTGCCGCCGGCCTTTGCGGACCTTaGTTTCATGTCGTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: WSQQPRRQNLGFWRRAAAGLCGP*FHVVCS
Trigger: ACTGCACACGACATGAAAGCAAGGTCCGCAAAGGCC...GGCGGCAGCTCTCCTCCAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGTGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331256.10
ENST00000594229.1
ENST00000601575.5
CDS-3UTR GCA 90 bp ACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGGAGGAGAGCTGCCGCCATCCCTGCCTTGGAGGCCTTTaGGGACCTTGCTTTCATGTC +
Preference number: 4 (lower is better)
Translates to: TAAKAAKPRLLEESCRHPCLGGL*GPCFHV
Trigger: GACATGAAAGCAAGGTCCGCAAAGGCCTCCAAGGCA...GGGATGGCGGCAGCTCTCCTCCAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594229.1
ENST00000601575.5
CDS-3UTR GCA 90 bp CCTGGAATGCTCTTCCCCCAGATGTCTGCCCACTTGGCTCCTTCCCCACCTCCTCATCCCCCGCAGATGTaGAGAATCCATGGAGCCAGA +
Preference number: 4 (lower is better)
Translates to: PGMLFPQMSAHLAPSPPPHPPQM*RIHGAR
Trigger: TCTGGCTCCATGGATTCTGCACATCTGCGGGGGATG...AGGAGGTGGGGAAGGAGCCAAGTGGGCAGACATCTGGGGGAAGAGCATTCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR GCA 90 bp CTGGGCAGTTTCTGGTCACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGGAGGCTGTCTCAGGGCCTTTaGACTGGCTGTTCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: LGSFWSQQPRRQNLGFWRLSQGL*TGCSSA
Trigger: GGCAGAGGAACAGCCAGTGCAAAGGCCCTGAGACAG...CCTCCAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGTGACCAGAAACTGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CCA 90 bp CCGCCATCCCTAGAGGTACATCCTCCGGCCAAACAGGGGTCTCACCACCCAGACTACAGTCATGGAGCCTaGCTCACCTGGGTAAGACAG +
Preference number: 4 (lower is better)
Translates to: PPSLEVHPPAKQGSHHPDYSHGA*LTWVRQ
Trigger: CTGTCTTACCCAGGTGAGCCAGGCTCCATGACTGTA...GTCTGGGTGGTGAGACCCCTGTTTGGCCGGAGGATGTACCTCTAGGGATGGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594229.1
ENST00000601575.5
CDS-3UTR CCA 90 bp GTCACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGGAGGAGAGCTGCCGCCATCACTTCAGAGCGGGTTaGGACCCATGTGGTCCAAGT +
Preference number: 4 (lower is better)
Translates to: VTAAKAAKPRLLEESCRHHFRAG*DPCGPS
Trigger: ACTTGGACCACATGGGTCCCAACCCGCTCTGAAGTG...ATGGCGGCAGCTCTCCTCCAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331256.10
ENST00000594229.1
ENST00000601575.5
CDS-3UTR CCA 90 bp GCTTCTGGAGGAGAGCTGCCGCCATCCCTAGAGGTACATCCTCCGGCCAAACAGCACTTCAGAGCGGGTTaGGACCCATGTGGTCCAAGT +
Preference number: 4 (lower is better)
Translates to: ASGGELPPSLEVHPPAKQHFRAG*DPCGPS
Trigger: ACTTGGACCACATGGGTCCCAACCCGCTCTGAAGTG...CTGTTTGGCCGGAGGATGTACCTCTAGGGATGGCGGCAGCTCTCCTCCAGAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594229.1
ENST00000601575.5
CDS-3UTR CCA 90 bp CCCACTTGGCTCCTTCCCCACCTCCTTCAGATCAAATGTTGCCCTCTCAGTGAGTCATACATGCCCTGCTaGGTGTCCCTGCGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: PTWLLPHLLQIKCCPLSESYMPC*VSLRSR
Trigger: CCGGCTGCGCAGGGACACCCAGCAGGGCATGTATGA...CTCACTGAGAGGGCAACATTTGATCTGAAGGAGGTGGGGAAGGAGCCAAGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CCA 90 bp CAGAGCTTAAGCCTCTTCATTCCTGAAGCCCCGTGGGCACCTCGCCCGATCAGAGAGAAGGAGATGATGTaGGCGGGACCCAGATCCCAG +
Preference number: 4 (lower is better)
Translates to: QSLSLFIPEAPWAPRPIREKEMM*AGPRSQ
Trigger: CTGGGATCTGGGTCCCGCCCACATCATCTCCTTCTC...TCTGATCGGGCGAGGTGCCCACGGGGCTTCAGGAATGAAGAGGCTTAAGCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CCA 90 bp GGGCAGTTTCTGGTCACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGGAGGAGGAGAAGGAGATGATGTaGGCGGGACCCAGATCCCAG +
Preference number: 4 (lower is better)
Translates to: GQFLVTAAKAAKPRLLEEEKEMM*AGPRSQ
Trigger: CTGGGATCTGGGTCCCGCCCACATCATCTCCTTCTC...CTCCTCCAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGTGACCAGAAACTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CCA 90 bp CCCACTTGGCTCCTTCCCCACCTCCTTCAGATCAAATGTTGCCCTCTCAGTGAGCTCCCCACCCAGGCCTaGGCAGTTTCTGGTCACAGC +
Preference number: 4 (lower is better)
Translates to: PTWLLPHLLQIKCCPLSELPTQA*AVSGHS
Trigger: GCTGTGACCAGAAACTGCCCAGGCCTGGGTGGGGAG...CTCACTGAGAGGGCAACATTTGATCTGAAGGAGGTGGGGAAGGAGCCAAGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CCA 90 bp CCTGGAATGCTCTTCCCCCAGATGTCTGCCCACTTGGCTCCTTCCCCACCTCCTAGATGTCTGCCCACTTaGCTCCTTCCCCACCTCCTT +
Preference number: 4 (lower is better)
Translates to: PGMLFPQMSAHLAPSPPPRCLPT*LLPHLL
Trigger: AAGGAGGTGGGGAAGGAGCCAAGTGGGCAGACATCT...AGGAGGTGGGGAAGGAGCCAAGTGGGCAGACATCTGGGGGAAGAGCATTCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CCA 90 bp TCACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGGAGGAGAGCTGCCGCCATCAGATGTCTGCCCACTTaGCTCCTTCCCCACCTCCTT +
Preference number: 4 (lower is better)
Translates to: SQQPRRQNLGFWRRAAAIRCLPT*LLPHLL
Trigger: AAGGAGGTGGGGAAGGAGCCAAGTGGGCAGACATCT...GATGGCGGCAGCTCTCCTCCAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR TCA 90 bp CAGAGCTTAAGCCTCTTCATTCCTGAAGCCCCGTGGGCACCTCGCCCGATCAGAGCAGCTTGCGAAGCGTaGCTCGGTGTATGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: QSLSLFIPEAPWAPRPIRAACEA*LGVCRA
Trigger: AGCTCTACATACACCGAGTCACGCTTCGCAAGCTGC...TCTGATCGGGCGAGGTGCCCACGGGGCTTCAGGAATGAAGAGGCTTAAGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR TCA 90 bp CTGGGCAGTTTCTGGTCACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGGAGGTCATACGAGTGCTCATaGGCCCACAGCTGCAGATCC +
Preference number: 4 (lower is better)
Translates to: LGSFWSQQPRRQNLGFWRSYECS*AHSCRS
Trigger: GGATCTGCAGCTGTGGGCTCATGAGCACTCGTATGA...CCTCCAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGTGACCAGAAACTGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR TCA 90 bp GCCATCCCTAGAGGTACATCCTCCGGCCAAACAGGGGTCTCACCACCCAGACATCTGTCTCTCCAGCACTaGGAACAGAGCCTGGCACAT +
Preference number: 4 (lower is better)
Translates to: AIPRGTSSGQTGVSPPRHLSLQH*EQSLAH
Trigger: ATGTGCCAGGCTCTGTTCTCAGTGCTGGAGAGACAG...ATGTCTGGGTGGTGAGACCCCTGTTTGGCCGGAGGATGTACCTCTAGGGATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601575.5
CDS-3UTR GCA 90 bp CAAAACCTAGGCTTCTGGAGGAGAGCTGCCGCCATCCCTAGAGGTACATCCTCCGGCTGCAACCCGAATTaGACTTCAGAGCGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: QNLGFWRRAAAIPRGTSSGCNPN*TSERVG
Trigger: CCCAACCCGCTCTGAAGTGCAATTCGGGTTGCAGCC...GGAGGATGTACCTCTAGGGATGGCGGCAGCTCTCCTCCAGAAGCCTAGGTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594229.1
ENST00000601575.5
CDS-3UTR GCA 90 bp TGCCCTCTCAGTGAGATCCCCCTGAAAATTGAAACTGCTCTCTCACCGTCCCTGGCGTCATACATGCCCTaGTGGGTGTCCCTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: CPLSEIPLKIETALSPSLASYMP*WVSLRS
Trigger: GCTGCGCAGGGACACCCAGCAGGGCATGTATGACGC...CAGGGACGGTGAGAGAGCAGTTTCAATTTTCAGGGGGATCTCACTGAGAGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR GCA 90 bp CAGAATCCATGGAGCCAGAGCTTAAGCCTCTTCATTCCTGAAGCCCCGTGGGCAGAACGGCGTCATACATaGCCTGCTGGGTGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: QNPWSQSLSLFIPEAPWAERRHT*PAGCPC
Trigger: GCAGGGACACCCAGCAGGGCATGTATGACGCCGTTC...TGCCCACGGGGCTTCAGGAATGAAGAGGCTTAAGCTCTGGCTCCATGGATTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR GCA 90 bp CCCACTTGGCTCCTTCCCCACCTCCTTCAGATCAAATGTTGCCCTCTCAGTGAGGAACGGCGTCATACATaGCCTGCTGGGTGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: PTWLLPHLLQIKCCPLSEERRHT*PAGCPC
Trigger: GCAGGGACACCCAGCAGGGCATGTATGACGCCGTTC...CTCACTGAGAGGGCAACATTTGATCTGAAGGAGGTGGGGAAGGAGCCAAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR GCA 90 bp CTGGGCAGTTTCTGGTCACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGGAGGCAGTACATGGGCCGGTaGCCCATAGTGATGATCCAC +
Preference number: 4 (lower is better)
Translates to: LGSFWSQQPRRQNLGFWRQYMGR*PIVMIH
Trigger: GTGGATCATCACTATGGGGCACCGGCCCATGTACTG...CCTCCAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGTGACCAGAAACTGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR GCA 90 bp GCAGGAGAGGAGGAAGCCCAGCGGCATCCCCCGCAGATGTGCAGAATCCATGGATGCTTTCATGTCGTGTaGAGTCGTCCAGATCTGCGT +
Preference number: 4 (lower is better)
Translates to: AGEEEAQRHPPQMCRIHGCFHVV*SRPDLR
Trigger: ACGCAGATCTGGACGACTGCACACGACATGAAAGCA...TCCATGGATTCTGCACATCTGCGGGGGATGCCGCTGGGCTTCCTCCTCTCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR GCA 90 bp GGAGGAGAGCTGCCGCCATCCCTAGAGGTACATCCTCCGGCCAAACAGGGGTCTTGCTTTCATGTCGTGTaGAGTCGTCCAGATCTGCGT +
Preference number: 4 (lower is better)
Translates to: GGELPPSLEVHPPAKQGSCFHVV*SRPDLR
Trigger: ACGCAGATCTGGACGACTGCACACGACATGAAAGCA...AGACCCCTGTTTGGCCGGAGGATGTACCTCTAGGGATGGCGGCAGCTCTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594229.1
ENST00000601575.5
CDS-3UTR GCA 90 bp CTGCCTGGAATGCTCTTCCCCCAGATGTCTGCCCACTTGGCTCCTTCCCCACCTGGCCTTTGCGGACCTTaGTTTCATGTCGTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: LPGMLFPQMSAHLAPSPPGLCGP*FHVVCS
Trigger: ACTGCACACGACATGAAAGCAAGGTCCGCAAAGGCC...AGGTGGGGAAGGAGCCAAGTGGGCAGACATCTGGGGGAAGAGCATTCCAGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR GCA 90 bp CCATCCCTAGAGGTACATCCTCCGGCCAAACAGGGGTCTCACCACCCAGACATCCATCCCCCGCAGATGTaGAGAATCCATGGAGCCAGA +
Preference number: 4 (lower is better)
Translates to: PSLEVHPPAKQGSHHPDIHPPQM*RIHGAR
Trigger: TCTGGCTCCATGGATTCTGCACATCTGCGGGGGATG...GATGTCTGGGTGGTGAGACCCCTGTTTGGCCGGAGGATGTACCTCTAGGGATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601575.5
CDS-3UTR GCA 90 bp GATGTGCAGCCGCGTATACCCGTACTCCTTCACACGCACGGCACTCCAGGGCCTCAGACCAACTCTCAGTaGCGGGCTCAGAAGAAAAAG +
Preference number: 4 (lower is better)
Translates to: DVQPRIPVLLHTHGTPGPQTNSQ*RAQKKK
Trigger: CTTTTTCTTCTGAGCCCGGCACTGAGAGTTGGTCTG...AGGCCCTGGAGTGCCGTGCGTGTGAAGGAGTACGGGTATACGCGGCTGCACATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601575.5
CDS-3UTR GCA 90 bp CCTGGAATGCTCTTCCCCCAGATGTCTGCCCACTTGGCTCCTTCCCCACCTCCTTTCCTCTGCCTGGAATaGTCTTCCCCCAGATGTCTG +
Preference number: 4 (lower is better)
Translates to: PGMLFPQMSAHLAPSPPPFLCLE*SSPRCL
Trigger: CAGACATCTGGGGGAAGAGCATTCCAGGCAGAGGAA...AGGAGGTGGGGAAGGAGCCAAGTGGGCAGACATCTGGGGGAAGAGCATTCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CCA 90 bp CAGAATCCATGGAGCCAGAGCTTAAGCCTCTTCATTCCTGAAGCCCCGTGGGCAGATCAGGCAGTGCTCTaGGGGACAACAGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: QNPWSQSLSLFIPEAPWADQAVL*GTTEAG
Trigger: CCCTGCCTCTGTTGTCCCCCAGAGCACTGCCTGATC...TGCCCACGGGGCTTCAGGAATGAAGAGGCTTAAGCTCTGGCTCCATGGATTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CCA 90 bp CAGAGCTTAAGCCTCTTCATTCCTGAAGCCCCGTGGGCACCTCGCCCGATCAGAGGAGCCTGGCTCACCTaGGTAAGACAGATGGACTTG +
Preference number: 4 (lower is better)
Translates to: QSLSLFIPEAPWAPRPIRGAWLT*VRQMDL
Trigger: CAAGTCCATCTGTCTTACCCAGGTGAGCCAGGCTCC...TCTGATCGGGCGAGGTGCCCACGGGGCTTCAGGAATGAAGAGGCTTAAGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CCA 90 bp TCACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGGAGGAGAGCTGCCGCCATCGGGTTGGGACCCATGTaGTCCAAGTTACAGTCATGG +
Preference number: 4 (lower is better)
Translates to: SQQPRRQNLGFWRRAAAIGLGPM*SKLQSW
Trigger: CCATGACTGTAACTTGGACCACATGGGTCCCAACCC...GATGGCGGCAGCTCTCCTCCAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331256.10
ENST00000594229.1
ENST00000601575.5
CDS-3UTR CCA 90 bp GTCACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGGAGGAGAGCTGCCGCCATGGGTTGGGACCCATGTaGTCCAAGTTACAGTCATGG +
Preference number: 4 (lower is better)
Translates to: VTAAKAAKPRLLEESCRHGLGPM*SKLQSW
Trigger: CCATGACTGTAACTTGGACCACATGGGTCCCAACCC...ATGGCGGCAGCTCTCCTCCAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331256.10
ENST00000594229.1
ENST00000601575.5
CDS-3UTR CCA 90 bp CCATCCCTAGAGGTACATCCTCCGGCCAAACAGGGGTCTCACCACCCAGACATCCACTTCAGAGCGGGTTaGGACCCATGTGGTCCAAGT +
Preference number: 4 (lower is better)
Translates to: PSLEVHPPAKQGSHHPDIHFRAG*DPCGPS
Trigger: ACTTGGACCACATGGGTCCCAACCCGCTCTGAAGTG...GATGTCTGGGTGGTGAGACCCCTGTTTGGCCGGAGGATGTACCTCTAGGGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594229.1
ENST00000601575.5
CDS-3UTR CCA 90 bp GACTACAGATGTGAGTTACTGTACCCAGCCGGCCAGGCACATTTCTGTCTCAGGTCATACATGCCCTGCTaGGTGTCCCTGCGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: DYRCELLYPAGQAHFCLRSYMPC*VSLRSR
Trigger: CCGGCTGCGCAGGGACACCCAGCAGGGCATGTATGA...CCTGAGACAGAAATGTGCCTGGCCGGCTGGGTACAGTAACTCACATCTGTAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CCA 90 bp CTGCCGCCATCCCTAGAGGTACATCCTCCGGCCAAACAGGGGTCTCACCACCCATTCTTATTGGCTTTCTaGAGGTCGCTCTCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: LPPSLEVHPPAKQGSHHPFLLAF*RSLSSQ
Trigger: CTGGCTGGAGAGCGACCTCCAGAAAGCCAATAAGAA...TGGGTGGTGAGACCCCTGTTTGGCCGGAGGATGTACCTCTAGGGATGGCGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594229.1
ENST00000601575.5
CDS-3UTR CCA 90 bp TCACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGGAGGAGAGCTGCCGCCATCCTGCCCGGTTCTTATTaGCTTTCTGGAGGTCGCTCT +
Preference number: 4 (lower is better)
Translates to: SQQPRRQNLGFWRRAAAILPGSY*LSGGRS
Trigger: AGAGCGACCTCCAGAAAGCCAATAAGAACCGGGCAG...GATGGCGGCAGCTCTCCTCCAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331256.10
ENST00000594229.1
ENST00000601575.5
CDS-3UTR CCA 90 bp GCAGGAGAGGAGGAAGCCCAGCGGCATCCCCCGCAGATGTGCAGAATCCATGGAGAACTGGCAAGTCTGTaGCTCTTGCGGTTTGTCATC +
Preference number: 4 (lower is better)
Translates to: AGEEEAQRHPPQMCRIHGELASL*LLRFVI
Trigger: GATGACAAACCGCAAGAGCCACAGACTTGCCAGTTC...TCCATGGATTCTGCACATCTGCGGGGGATGCCGCTGGGCTTCCTCCTCTCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR TCA 90 bp CCACAGCCAGCCAGGACTCCCACCTCTCCAGGAGGGAACAGCTGCCCCAGCTCCCCAACTCATTTATCGTaGTTTTTGTCCAACTCTCTG +
Preference number: 4 (lower is better)
Translates to: PQPARTPTSPGGNSCPSSPTHLS*FLSNSL
Trigger: CAGAGAGTTGGACAAAAATCACGATAAATGAGTTGG...GGAGCTGGGGCAGCTGTTCCCTCCTGGAGAGGTGGGAGTCCTGGCTGGCTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR GCA 90 bp CCCACTTGGCTCCTTCCCCACCTCCTTCAGATCAAATGTTGCCCTCTCAGTGAGGATCCACGGCCGGGCTaGCCGGTTCTTATTGGCTTT +
Preference number: 4 (lower is better)
Translates to: PTWLLPHLLQIKCCPLSEDPRPG*PVLIGF
Trigger: AAAGCCAATAAGAACCGGGCAGCCCGGCCGTGGATC...CTCACTGAGAGGGCAACATTTGATCTGAAGGAGGTGGGGAAGGAGCCAAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR GCA 90 bp CTGGGCAGTTTCTGGTCACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGGAGGTGCCTTGGAGGCCTTTaGGGACCTTGCTTTCATGTC +
Preference number: 4 (lower is better)
Translates to: LGSFWSQQPRRQNLGFWRCLGGL*GPCFHV
Trigger: GACATGAAAGCAAGGTCCGCAAAGGCCTCCAAGGCA...CCTCCAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGTGACCAGAAACTGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR GCA 90 bp CAGAATCCATGGAGCCAGAGCTTAAGCCTCTTCATTCCTGAAGCCCCGTGGGCACTGCCAGCAGAAACCTaGCGTGTGTCACTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: QNPWSQSLSLFIPEAPWALPAET*RVSLCA
Trigger: GGCACAGAGTGACACACGGCAGGTTTCTGCTGGCAG...TGCCCACGGGGCTTCAGGAATGAAGAGGCTTAAGCTCTGGCTCCATGGATTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR GCA 90 bp CAGAGCTTAAGCCTCTTCATTCCTGAAGCCCCGTGGGCACCTCGCCCGATCAGATCCCGAATAAGATGGTaGCAGGCTGGGAAACTGAGG +
Preference number: 4 (lower is better)
Translates to: QSLSLFIPEAPWAPRPIRSRIRW*QAGKLR
Trigger: CCTCAGTTTCCCAGCCTGGCACCATCTTATTCGGGA...TCTGATCGGGCGAGGTGCCCACGGGGCTTCAGGAATGAAGAGGCTTAAGCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR GCA 90 bp AGGCCTGGGCAGTTTCTGGTCACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGTCCCGAATAAGATGGTaGCAGGCTGGGAAACTGAGG +
Preference number: 4 (lower is better)
Translates to: RPGQFLVTAAKAAKPRLLSRIRW*QAGKLR
Trigger: CCTCAGTTTCCCAGCCTGGCACCATCTTATTCGGGA...CAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGTGACCAGAAACTGCCCAGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR GCA 90 bp TGGTCACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGGAGGAGAGCTGCCGCCCTTCAGATCAAATGTTaGCCTCTCAGTGAGATCCCC +
Preference number: 4 (lower is better)
Translates to: WSQQPRRQNLGFWRRAAALQIKC*PLSEIP
Trigger: GGGGATCTCACTGAGAGGGCAACATTTGATCTGAAG...GGCGGCAGCTCTCCTCCAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGTGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CCA 90 bp CCATCCCTAGAGGTACATCCTCCGGCCAAACAGGGGTCTCACCACCCAGACATCTACAGTCATGGAGCCTaGCTCACCTGGGTAAGACAG +
Preference number: 4 (lower is better)
Translates to: PSLEVHPPAKQGSHHPDIYSHGA*LTWVRQ
Trigger: CTGTCTTACCCAGGTGAGCCAGGCTCCATGACTGTA...GATGTCTGGGTGGTGAGACCCCTGTTTGGCCGGAGGATGTACCTCTAGGGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594229.1
ENST00000601575.5
CDS-3UTR CCA 90 bp ACTGTACCCAGCCGGCCAGGCACATTTCTGTCTCAGGGCCTTTGCACTGGCTGTCTGCCCGGTTCTTATTaGCTTTCTGGAGGTCGCTCT +
Preference number: 4 (lower is better)
Translates to: TVPSRPGTFLSQGLCTGCLPGSY*LSGGRS
Trigger: AGAGCGACCTCCAGAAAGCCAATAAGAACCGGGCAG...ACAGCCAGTGCAAAGGCCCTGAGACAGAAATGTGCCTGGCCGGCTGGGTACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CCA 90 bp CCCACTTGGCTCCTTCCCCACCTCCTTCAGATCAAATGTTGCCCTCTCAGTGAGCCGTACAGCTTGCCTTaGAGGCCTTTGCGGACCTTG +
Preference number: 4 (lower is better)
Translates to: PTWLLPHLLQIKCCPLSEPYSLP*RPLRTL
Trigger: CAAGGTCCGCAAAGGCCTCCAAGGCAAGCTGTACGG...CTCACTGAGAGGGCAACATTTGATCTGAAGGAGGTGGGGAAGGAGCCAAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CCA 90 bp TGCCCTCTCAGTGAGATCCCCCTGAAAATTGAAACTGCTCTCTCACCGTCCCTGATTCCTGAAGCCCCGTaGGCACCTCGCCCGATCAGA +
Preference number: 4 (lower is better)
Translates to: CPLSEIPLKIETALSPSLIPEAP*APRPIR
Trigger: TCTGATCGGGCGAGGTGCCCACGGGGCTTCAGGAAT...CAGGGACGGTGAGAGAGCAGTTTCAATTTTCAGGGGGATCTCACTGAGAGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CCA 90 bp TCACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGGAGGAGAGCTGCCGCCATCGATGTGCAGAATCCATaGAGCCAGAGCTTAAGCCTC +
Preference number: 4 (lower is better)
Translates to: SQQPRRQNLGFWRRAAAIDVQNP*SQSLSL
Trigger: GAGGCTTAAGCTCTGGCTCCATGGATTCTGCACATC...GATGGCGGCAGCTCTCCTCCAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CCA 90 bp CCTGGAATGCTCTTCCCCCAGATGTCTGCCCACTTGGCTCCTTCCCCACCTCCTGAACTGGCAAGTCTGTaGCTCTTGCGGTTTGTCATC +
Preference number: 4 (lower is better)
Translates to: PGMLFPQMSAHLAPSPPPELASL*LLRFVI
Trigger: GATGACAAACCGCAAGAGCCACAGACTTGCCAGTTC...AGGAGGTGGGGAAGGAGCCAAGTGGGCAGACATCTGGGGGAAGAGCATTCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CCA 90 bp TCACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGGAGGAGAGCTGCCGCCATCAAAGAGGGAAGGAACTaGCAAGTCTGTGGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: SQQPRRQNLGFWRRAAAIKEGRN*QVCGSC
Trigger: GCAAGAGCCACAGACTTGCCAGTTCCTTCCCTCTTT...GATGGCGGCAGCTCTCCTCCAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CCA 90 bp TGGGTCCCGTTGAGGATGTGCAGCCGCGTATACCCGTACTCCTTCACACGCACGAAAGAGGGAAGGAACTaGCAAGTCTGTGGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: WVPLRMCSRVYPYSFTRTKEGRN*QVCGSC
Trigger: GCAAGAGCCACAGACTTGCCAGTTCCTTCCCTCTTT...CGTGCGTGTGAAGGAGTACGGGTATACGCGGCTGCACATCCTCAACGGGACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601575.5
CDS-3UTR CCA 90 bp AGAGGAGGAAGCCCAGCGGCATCCCCCGCAGATGTGCAGAATCCATGGAGCCAGACTGAGAACAGAGCCTaGCACATGGTAGATGCTCAA +
Preference number: 4 (lower is better)
Translates to: RGGSPAASPADVQNPWSQTENRA*HMVDAQ
Trigger: TTGAGCATCTACCATGTGCCAGGCTCTGTTCTCAGT...CTGGCTCCATGGATTCTGCACATCTGCGGGGGATGCCGCTGGGCTTCCTCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CCA 90 bp GGAGAGCTGCCGCCATCCCTAGAGGTACATCCTCCGGCCAAACAGGGGTCTCACAGAGAAGTTGCCACATaGAGAACGGCGTCATACATG +
Preference number: 4 (lower is better)
Translates to: GELPPSLEVHPPAKQGSHREVAT*RTASYM
Trigger: CATGTATGACGCCGTTCTCCATGTGGCAACTTCTCT...GTGAGACCCCTGTTTGGCCGGAGGATGTACCTCTAGGGATGGCGGCAGCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594229.1
ENST00000601575.5
CDS-3UTR GCA 90 bp CAGAGCTTAAGCCTCTTCATTCCTGAAGCCCCGTGGGCACCTCGCCCGATCAGATGCTTTCATGTCGTGTaGAGTCGTCCAGATCTGCGT +
Preference number: 4 (lower is better)
Translates to: QSLSLFIPEAPWAPRPIRCFHVV*SRPDLR
Trigger: ACGCAGATCTGGACGACTGCACACGACATGAAAGCA...TCTGATCGGGCGAGGTGCCCACGGGGCTTCAGGAATGAAGAGGCTTAAGCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR GCA 90 bp CCTGGAATGCTCTTCCCCCAGATGTCTGCCCACTTGGCTCCTTCCCCACCTCCTCTCTCTCACCGTCCCTaGGTTTTCTACTCACAAATC +
Preference number: 4 (lower is better)
Translates to: PGMLFPQMSAHLAPSPPPLSHRP*VFYSQI
Trigger: GATTTGTGAGTAGAAAACGCAGGGACGGTGAGAGAG...AGGAGGTGGGGAAGGAGCCAAGTGGGCAGACATCTGGGGGAAGAGCATTCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CCA 90 bp CTGGGCAGTTTCTGGTCACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGGAGGAGGTCTCCTTCAAGATaGGTGGTTATCCAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: LGSFWSQQPRRQNLGFWRRSPSR*VVIQVP
Trigger: AGGCACCTGGATAACCACCCATCTTGAAGGAGACCT...CCTCCAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGTGACCAGAAACTGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331256.10
CDS-3UTR CCA 90 bp AGGCCTGGGCAGTTTCTGGTCACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGGATGTGCAGAATCCATaGAGCCAGAGCTTAAGCCTC +
Preference number: 4 (lower is better)
Translates to: RPGQFLVTAAKAAKPRLLDVQNP*SQSLSL
Trigger: GAGGCTTAAGCTCTGGCTCCATGGATTCTGCACATC...CAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGTGACCAGAAACTGCCCAGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CCA 90 bp CTGGGCAGTTTCTGGTCACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGGAGGTCTTCCCGAATAAGATaGTGCCAGGCTGGGAAACTG +
Preference number: 4 (lower is better)
Translates to: LGSFWSQQPRRQNLGFWRSSRIR*CQAGKL
Trigger: CAGTTTCCCAGCCTGGCACCATCTTATTCGGGAAGA...CCTCCAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGTGACCAGAAACTGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CCA 90 bp TCACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGGAGGAGAGCTGCCGCCATCACTGAGAACAGAGCCTaGCACATGGTAGATGCTCAA +
Preference number: 4 (lower is better)
Translates to: SQQPRRQNLGFWRRAAAITENRA*HMVDAQ
Trigger: TTGAGCATCTACCATGTGCCAGGCTCTGTTCTCAGT...GATGGCGGCAGCTCTCCTCCAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR GCA 90 bp GATGTGCAGAATCCATGGAGCCAGAGCTTAAGCCTCTTCATTCCTGAAGCCCCGGCAGTCGTCCAGATCTaGGTTGGAGCAGTACATGGG +
Preference number: 4 (lower is better)
Translates to: DVQNPWSQSLSLFIPEAPAVVQI*VGAVHG
Trigger: CCCATGTACTGCTCCAACGCAGATCTGGACGACTGC...CGGGGCTTCAGGAATGAAGAGGCTTAAGCTCTGGCTCCATGGATTCTGCACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR GCA 90 bp CAGACATCATCTACGATCTTCCCATCCTGGTCGTCCGACACCTGCTGGATGTGGTGCCTTGGAGGCCTTTaGGGACCTTGCTTTCATGTC +
Preference number: 4 (lower is better)
Translates to: QTSSTIFPSWSSDTCWMWCLGGL*GPCFHV
Trigger: GACATGAAAGCAAGGTCCGCAAAGGCCTCCAAGGCA...CCACATCCAGCAGGTGTCGGACGACCAGGATGGGAAGATCGTAGATGATGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601575.5
CDS-3UTR GCA 90 bp ACTGTACCCAGCCGGCCAGGCACATTTCTGTCTCAGGGCCTTTGCACTGGCTGTCTTCAGATCAAATGTTaGCCTCTCAGTGAGATCCCC +
Preference number: 4 (lower is better)
Translates to: TVPSRPGTFLSQGLCTGCLQIKC*PLSEIP
Trigger: GGGGATCTCACTGAGAGGGCAACATTTGATCTGAAG...ACAGCCAGTGCAAAGGCCCTGAGACAGAAATGTGCCTGGCCGGCTGGGTACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CCA 90 bp TGCCCTCTCAGTGAGATCCCCCTGAAAATTGAAACTGCTCTCTCACCGTCCCTGCTCCTTCAAGATGGGTaGTTATCCAGGTGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: CPLSEIPLKIETALSPSLLLQDG*LSRCLG
Trigger: CCCGAGGCACCTGGATAACCACCCATCTTGAAGGAG...CAGGGACGGTGAGAGAGCAGTTTCAATTTTCAGGGGGATCTCACTGAGAGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331256.10
CDS-3UTR CCA 90 bp TGCCCTCTCAGTGAGATCCCCCTGAAAATTGAAACTGCTCTCTCACCGTCCCTGGGAGCCTGGCTCACCTaGGTAAGACAGATGGACTTG +
Preference number: 4 (lower is better)
Translates to: CPLSEIPLKIETALSPSLGAWLT*VRQMDL
Trigger: CAAGTCCATCTGTCTTACCCAGGTGAGCCAGGCTCC...CAGGGACGGTGAGAGAGCAGTTTCAATTTTCAGGGGGATCTCACTGAGAGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CCA 90 bp CAGAATCCATGGAGCCAGAGCTTAAGCCTCTTCATTCCTGAAGCCCCGTGGGCATACAGTCATGGAGCCTaGCTCACCTGGGTAAGACAG +
Preference number: 4 (lower is better)
Translates to: QNPWSQSLSLFIPEAPWAYSHGA*LTWVRQ
Trigger: CTGTCTTACCCAGGTGAGCCAGGCTCCATGACTGTA...TGCCCACGGGGCTTCAGGAATGAAGAGGCTTAAGCTCTGGCTCCATGGATTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CCA 90 bp GCAGGAGAGGAGGAAGCCCAGCGGCATCCCCCGCAGATGTGCAGAATCCATGGACTGGTAGTTGTAAATTaGCCACAGTCGTTCATACGA +
Preference number: 4 (lower is better)
Translates to: AGEEEAQRHPPQMCRIHGLVVVN*PQSFIR
Trigger: TCGTATGAACGACTGTGGCCAATTTACAACTACCAG...TCCATGGATTCTGCACATCTGCGGGGGATGCCGCTGGGCTTCCTCCTCTCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CCA 90 bp GGAGGAGAGCTGCCGCCATCCCTAGAGGTACATCCTCCGGCCAAACAGGGGTCTCTGGTAGTTGTAAATTaGCCACAGTCGTTCATACGA +
Preference number: 4 (lower is better)
Translates to: GGELPPSLEVHPPAKQGSLVVVN*PQSFIR
Trigger: TCGTATGAACGACTGTGGCCAATTTACAACTACCAG...AGACCCCTGTTTGGCCGGAGGATGTACCTCTAGGGATGGCGGCAGCTCTCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594229.1
ENST00000601575.5
CDS-3UTR CCA 90 bp CAGAGCTTAAGCCTCTTCATTCCTGAAGCCCCGTGGGCACCTCGCCCGATCAGAAGAGAAGTTGCCACATaGAGAACGGCGTCATACATG +
Preference number: 4 (lower is better)
Translates to: QSLSLFIPEAPWAPRPIRREVAT*RTASYM
Trigger: CATGTATGACGCCGTTCTCCATGTGGCAACTTCTCT...TCTGATCGGGCGAGGTGCCCACGGGGCTTCAGGAATGAAGAGGCTTAAGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601575.5
CDS-3UTR TCA 90 bp TTTTGTCCAACTCTCTGGTTAGGATGTCAGCTCTGTGAGGGCCGAGATCTCTGTGCAGTCCTGGAGCAGTaGAGAAGGAGCCAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: FCPTLWLGCQLCEGRDLCAVLEQ*RRSQAS
Trigger: TGAAGCCTGGCTCCTTCTTCACTGCTCCAGGACTGC...ACAGAGATCTCGGCCCTCACAGAGCTGACATCCTAACCAGAGAGTTGGACAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR TCA 90 bp TGGTCACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGGAGGAGAGCTGCCGCCCCAACTCATTTATCGTaGTTTTTGTCCAACTCTCTG +
Preference number: 4 (lower is better)
Translates to: WSQQPRRQNLGFWRRAAAPTHLS*FLSNSL
Trigger: CAGAGAGTTGGACAAAAATCACGATAAATGAGTTGG...GGCGGCAGCTCTCCTCCAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGTGACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR TCA 90 bp ATCCTCCGGCCAAACAGGGGTCTCACCACCCAGACATCATCTACGATCTTCCCAGATCCCCCTGAAAATTaGAACTGCTCTCTCACCGTC +
Preference number: 4 (lower is better)
Translates to: ILRPNRGLTTQTSSTIFPDPPEN*NCSLTV
Trigger: GACGGTGAGAGAGCAGTTTCAATTTTCAGGGGGATC...TGGGAAGATCGTAGATGATGTCTGGGTGGTGAGACCCCTGTTTGGCCGGAGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000601575.5
CDS-3UTR GCA 90 bp TGCCCTCTCAGTGAGATCCCCCTGAAAATTGAAACTGCTCTCTCACCGTCCCTGTCCAGCCCTGCGCACTaGCACAGCGATAAACATACT +
Preference number: 4 (lower is better)
Translates to: CPLSEIPLKIETALSPSLSSPAH*HSDKHT
Trigger: AGTATGTTTATCGCTGTGGCAGTGCGCAGGGCTGGA...CAGGGACGGTGAGAGAGCAGTTTCAATTTTCAGGGGGATCTCACTGAGAGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR GCA 90 bp CAGAATCCATGGAGCCAGAGCTTAAGCCTCTTCATTCCTGAAGCCCCGTGGGCACAGACCAACTCTCAGTaGCGGGCTCAGAAGAAAAAG +
Preference number: 4 (lower is better)
Translates to: QNPWSQSLSLFIPEAPWAQTNSQ*RAQKKK
Trigger: CTTTTTCTTCTGAGCCCGGCACTGAGAGTTGGTCTG...TGCCCACGGGGCTTCAGGAATGAAGAGGCTTAAGCTCTGGCTCCATGGATTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CCA 90 bp GACTACAGATGTGAGTTACTGTACCCAGCCGGCCAGGCACATTTCTGTCTCAGGGGGTTGGGACCCATGTaGTCCAAGTTACAGTCATGG +
Preference number: 4 (lower is better)
Translates to: DYRCELLYPAGQAHFCLRGLGPM*SKLQSW
Trigger: CCATGACTGTAACTTGGACCACATGGGTCCCAACCC...CCTGAGACAGAAATGTGCCTGGCCGGCTGGGTACAGTAACTCACATCTGTAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CCA 90 bp TGCCCTCTCAGTGAGATCCCCCTGAAAATTGAAACTGCTCTCTCACCGTCCCTGCTGCCCGGTTCTTATTaGCTTTCTGGAGGTCGCTCT +
Preference number: 4 (lower is better)
Translates to: CPLSEIPLKIETALSPSLLPGSY*LSGGRS
Trigger: AGAGCGACCTCCAGAAAGCCAATAAGAACCGGGCAG...CAGGGACGGTGAGAGAGCAGTTTCAATTTTCAGGGGGATCTCACTGAGAGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CCA 90 bp GACTACAGATGTGAGTTACTGTACCCAGCCGGCCAGGCACATTTCTGTCTCAGGGCAAAGTCTCCCACATaGAGAACGGCGTCATACATG +
Preference number: 4 (lower is better)
Translates to: DYRCELLYPAGQAHFCLRAKSPT*RTASYM
Trigger: CATGTATGACGCCGTTCTCCATGTGGGAGACTTTGC...CCTGAGACAGAAATGTGCCTGGCCGGCTGGGTACAGTAACTCACATCTGTAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331256.10
CDS-3UTR CCA 90 bp TGCCCTCTCAGTGAGATCCCCCTGAAAATTGAAACTGCTCTCTCACCGTCCCTGTTCTTATTGGCTTTCTaGAGGTCGCTCTCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: CPLSEIPLKIETALSPSLFLLAF*RSLSSQ
Trigger: CTGGCTGGAGAGCGACCTCCAGAAAGCCAATAAGAA...CAGGGACGGTGAGAGAGCAGTTTCAATTTTCAGGGGGATCTCACTGAGAGGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CCA 90 bp CAGAGCTTAAGCCTCTTCATTCCTGAAGCCCCGTGGGCACCTCGCCCGATCAGACTGGTAGTTGTAAATTaGCCACAGTCGTTCATACGA +
Preference number: 4 (lower is better)
Translates to: QSLSLFIPEAPWAPRPIRLVVVN*PQSFIR
Trigger: TCGTATGAACGACTGTGGCCAATTTACAACTACCAG...TCTGATCGGGCGAGGTGCCCACGGGGCTTCAGGAATGAAGAGGCTTAAGCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR GCA 90 bp TGCCCTCTCAGTGAGATCCCCCTGAAAATTGAAACTGCTCTCTCACCGTCCCTGCTCTCTCACCGTCCCTaGGTTTTCTACTCACAAATC +
Preference number: 4 (lower is better)
Translates to: CPLSEIPLKIETALSPSLLSHRP*VFYSQI
Trigger: GATTTGTGAGTAGAAAACGCAGGGACGGTGAGAGAG...CAGGGACGGTGAGAGAGCAGTTTCAATTTTCAGGGGGATCTCACTGAGAGGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CCA 90 bp CATCATCTACGATCTTCCCATCCTGGTCGTCCGACACCTGCTGGATGTGGATGTAGGTCTCCTTCAAGATaGGTGGTTATCCAGGTGCTT +
Preference number: 4 (lower is better)
Translates to: HHLRSSHPGRPTPAGCGCRSPSR*VVIQVL
Trigger: AAGCACCTGGATAACCACCCATCTTGAAGGAGACCT...ACATCCACATCCAGCAGGTGTCGGACGACCAGGATGGGAAGATCGTAGATGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601575.5
CDS-3UTR CCA 90 bp TTTTGTCCAACTCTCTGGTTAGGATGTCAGCTCTGTGAGGGCCGAGATCTCTGTTCTTCCCGAATAAGATaGTGCCAGGCTGGGAAACTG +
Preference number: 4 (lower is better)
Translates to: FCPTLWLGCQLCEGRDLCSSRIR*CQAGKL
Trigger: CAGTTTCCCAGCCTGGCACCATCTTATTCGGGAAGA...ACAGAGATCTCGGCCCTCACAGAGCTGACATCCTAACCAGAGAGTTGGACAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CCA 90 bp TTTTGTCCAACTCTCTGGTTAGGATGTCAGCTCTGTGAGGGCCGAGATCTCTGTCTCCTTCAAGATGGGTaGTTATCCAGGTGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: FCPTLWLGCQLCEGRDLCLLQDG*LSRCFP
Trigger: TGGAAAGCACCTGGATAACCACCCATCTTGAAGGAG...ACAGAGATCTCGGCCCTCACAGAGCTGACATCCTAACCAGAGAGTTGGACAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601575.5
CDS-3UTR CAA 90 bp CTGAAGCCCCGTGGGCACCTCGCCCGATCAGAGCTATGCAGGAGGGTGGGGCCCGGGACGGCCTTCGGGTaGTCAGCCCCCAGGTCTCCA +
Preference number: 5 (lower is better)
Translates to: LKPRGHLARSELCRRVGPGTAFG*SAPRSP
Trigger: TGGAGACCTGGGGGCTGACAACCCGAAGGCCGTCCC...GGGCCCCACCCTCCTGCATAGCTCTGATCGGGCGAGGTGCCCACGGGGCTTCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS GCA 90 bp CTCCCACATGGAGAACGGCGTCATACATGCCCTGCTGGGTGTCCCTaGGCAGCCGGGGGACGGCCTTCGGGTTGTCAGCCCCCAGGTCTC +
Preference number: 5 (lower is better)
Translates to: LPHGERRHTCPAGCP*AAGGRPSGCQPPGL
Trigger: GAGACCTGGGGGCTGACAACCCGAAGGCCGTCCCCCGGCTGCGCAGGGACACCCAGCAGGGCATGTATGACGCCGTTCTCCATGTGGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000331256.10
CDS GCA 90 bp TTGCCACATGGAGAACGGCGTCATACATGCCCTGCTGGGTGTCCCTaGGCAGCCGGGGGACGGCCTTCGGGTTGTCAGCCCCCAGGTCTC +
Preference number: 5 (lower is better)
Translates to: LPHGERRHTCPAGCP*AAGGRPSGCQPPGL
Trigger: GAGACCTGGGGGCTGACAACCCGAAGGCCGTCCCCCGGCTGCGCAGGGACACCCAGCAGGGCATGTATGACGCCGTTCTCCATGTGGCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000594229.1
ENST00000601575.5
CDS-3UTR CAA 90 bp CCGCCATCCCTAGAGGTACATCCTCCGGCCAAACAGGGGTCTCACCACCCAGACGGGACGGCCTTCGGGTaGTCAGCCCCCAGGTCTCCA +
Preference number: 5 (lower is better)
Translates to: PPSLEVHPPAKQGSHHPDGTAFG*SAPRSP
Trigger: TGGAGACCTGGGGGCTGACAACCCGAAGGCCGTCCC...GTCTGGGTGGTGAGACCCCTGTTTGGCCGGAGGATGTACCTCTAGGGATGGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594229.1
ENST00000601575.5
CDS-3UTR CAA 90 bp CCACAGCCAGCCAGGACTCCCACCTCTCCAGGAGGGAACAGCTGCCCCAGCTCCCAGATGTCTGCCCACTaGGCTCCTTCCCCACCTCCT +
Preference number: 5 (lower is better)
Translates to: PQPARTPTSPGGNSCPSSQMSAH*APSPPP
Trigger: AGGAGGTGGGGAAGGAGCCAAGTGGGCAGACATCTG...GGAGCTGGGGCAGCTGTTCCCTCCTGGAGAGGTGGGAGTCCTGGCTGGCTGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS GCA 90 bp CCAGGTTGTAGGCAAAGTCTCCCACATGGAGAACGGCGTCATACATaGCCTGCTGGGTGTCCCTGCGCAGCCGGGGGACGGCCTTCGGGT +
Preference number: 5 (lower is better)
Translates to: PGCRQSLPHGERRHT*PAGCPCAAGGRPSG
Trigger: ACCCGAAGGCCGTCCCCCGGCTGCGCAGGGACACCCAGCAGGGCATGTATGACGCCGTTCTCCATGTGGGAGACTTTGCCTACAACCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601531.1
CDS GCA 90 bp GCAGTACATGGGCCGGTGCCCCATAGTGATGATCCACGGCCGGGCTaGCCGGTTCTTATTGGCTTTCTGGAGGTCGCTCTCCAGCCAGCG +
Preference number: 5 (lower is better)
Translates to: AVHGPVPHSDDPRPG*PVLIGFLEVALQPA
Trigger: CGCTGGCTGGAGAGCGACCTCCAGAAAGCCAATAAGAACCGGGCAGCCCGGCCGTGGATCATCACTATGGGGCACCGGCCCATGTACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331256.10
ENST00000594229.1
ENST00000601531.1
ENST00000601575.5
CDS-3UTR CAA 90 bp TGGTCACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGGAGGAGAGCTGCCGCCACCCCTGGCAGCAGCTaGCGAAGCGTGACTCGGTGT +
Preference number: 5 (lower is better)
Translates to: WSQQPRRQNLGFWRRAAATPGSS*RSVTRC
Trigger: ACACCGAGTCACGCTTCGCAAGCTGCTGCCAGGGGT...GGCGGCAGCTCTCCTCCAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGTGACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331256.10
ENST00000594229.1
ENST00000601575.5
CDS-3UTR CAA 90 bp GCCGCCATCCCTAGAGGTACATCCTCCGGCCAAACAGGGGTCTCACCACCCAGAACCCCTGGCAGCAGCTaGCGAAGCGTGACTCGGTGT +
Preference number: 5 (lower is better)
Translates to: AAIPRGTSSGQTGVSPPRTPGSS*RSVTRC
Trigger: ACACCGAGTCACGCTTCGCAAGCTGCTGCCAGGGGT...TCTGGGTGGTGAGACCCCTGTTTGGCCGGAGGATGTACCTCTAGGGATGGCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594229.1
ENST00000601575.5
CDS-3UTR CAA 90 bp TGGTCACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGGAGGAGAGCTGCCGCCCAGTGGGCCCCATTCTaGAGGGCCCTGAAGCGGAAC +
Preference number: 5 (lower is better)
Translates to: WSQQPRRQNLGFWRRAAAQWAPF*RALKRN
Trigger: GTTCCGCTTCAGGGCCCTCAAGAATGGGGCCCACTG...GGCGGCAGCTCTCCTCCAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGTGACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331256.10
ENST00000594229.1
ENST00000601575.5
CDS-3UTR CAA 90 bp CTGCCGCCATCCCTAGAGGTACATCCTCCGGCCAAACAGGGGTCTCACCACCCAGCACTTCAGAGCGGGTaGGGACCCATGTGGTCCAAG +
Preference number: 5 (lower is better)
Translates to: LPPSLEVHPPAKQGSHHPALQSG*GPMWSK
Trigger: CTTGGACCACATGGGTCCCAACCCGCTCTGAAGTGC...TGGGTGGTGAGACCCCTGTTTGGCCGGAGGATGTACCTCTAGGGATGGCGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594229.1
ENST00000601575.5
CDS-3UTR CAA 90 bp GCTTCTGGAGGAGAGCTGCCGCCATCCCTAGAGGTACATCCTCCGGCCAAACAGACCCCTGGCAGCAGCTaGCGAAGCGTGACTCGGTGT +
Preference number: 5 (lower is better)
Translates to: ASGGELPPSLEVHPPAKQTPGSS*RSVTRC
Trigger: ACACCGAGTCACGCTTCGCAAGCTGCTGCCAGGGGT...CTGTTTGGCCGGAGGATGTACCTCTAGGGATGGCGGCAGCTCTCCTCCAGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594229.1
ENST00000601575.5
CDS-3UTR CAA 90 bp TCACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGGAGGAGAGCTGCCGCCATCCAGTGGGCCCCATTCTaGAGGGCCCTGAAGCGGAAC +
Preference number: 5 (lower is better)
Translates to: SQQPRRQNLGFWRRAAAIQWAPF*RALKRN
Trigger: GTTCCGCTTCAGGGCCCTCAAGAATGGGGCCCACTG...GATGGCGGCAGCTCTCCTCCAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331256.10
ENST00000594229.1
ENST00000601575.5
CDS-3UTR CAA 90 bp GGAGGAGAGCTGCCGCCATCCCTAGAGGTACATCCTCCGGCCAAACAGGGGTCTTCGTCCAGATCTGCGTaGGAGCAGTACATGGGCCGG +
Preference number: 5 (lower is better)
Translates to: GGELPPSLEVHPPAKQGSSSRSA*EQYMGR
Trigger: CCGGCCCATGTACTGCTCCAACGCAGATCTGGACGA...AGACCCCTGTTTGGCCGGAGGATGTACCTCTAGGGATGGCGGCAGCTCTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594229.1
ENST00000601575.5
CDS-3UTR CAA 90 bp ACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGGAGGAGAGCTGCCGCCATCCCCCCGTACAGCTTGCCTaGGAGGCCTTTGCGGACCTT +
Preference number: 5 (lower is better)
Translates to: TAAKAAKPRLLEESCRHPPVQLA*EAFADL
Trigger: AAGGTCCGCAAAGGCCTCCAAGGCAAGCTGTACGGG...GGGATGGCGGCAGCTCTCCTCCAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000594229.1
ENST00000601575.5
CDS-3UTR CAA 90 bp CCGCCATCCCTAGAGGTACATCCTCCGGCCAAACAGGGGTCTCACCACCCAGACTCCAACCCGTACAGCTaGCCTTGGAGGCCTTTGCGG +
Preference number: 5 (lower is better)
Translates to: PPSLEVHPPAKQGSHHPDSNPYS*PWRPLR
Trigger: CCGCAAAGGCCTCCAAGGCAAGCTGTACGGGTTGGA...GTCTGGGTGGTGAGACCCCTGTTTGGCCGGAGGATGTACCTCTAGGGATGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594229.1
ENST00000601575.5
CDS-3UTR CAA 90 bp AGAGGAGGAAGCCCAGCGGCATCCCCCGCAGATGTGCAGAATCCATGGAGCCAGCAGATGTCTGCCCACTaGGCTCCTTCCCCACCTCCT +
Preference number: 5 (lower is better)
Translates to: RGGSPAASPADVQNPWSQQMSAH*APSPPP
Trigger: AGGAGGTGGGGAAGGAGCCAAGTGGGCAGACATCTG...CTGGCTCCATGGATTCTGCACATCTGCGGGGGATGCCGCTGGGCTTCCTCCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS GCA 90 bp CGTGTGCAGTCGTCCAGATCTGCGTTGGAGCAGTACATGGGCCGGTaGCCCATAGTGATGATCCACGGCCGGGCTGCCCGGTTCTTATTG +
Preference number: 5 (lower is better)
Translates to: RVQSSRSALEQYMGR*PIVMIHGRAARFLL
Trigger: CAATAAGAACCGGGCAGCCCGGCCGTGGATCATCACTATGGGGCACCGGCCCATGTACTGCTCCAACGCAGATCTGGACGACTGCACACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331256.10
ENST00000594229.1
ENST00000601531.1
ENST00000601575.5
CDS GCA 90 bp GTAGTTAGAGAAGTTGCCACATGGAGAACGGCGTCATACATGCCCTaGTGGGTGTCCCTGCGCAGCCGGGGGACGGCCTTCGGGTTGTCA +
Preference number: 5 (lower is better)
Translates to: VVREVATWRTASYMP*WVSLRSRGTAFGLS
Trigger: TGACAACCCGAAGGCCGTCCCCCGGCTGCGCAGGGACACCCAGCAGGGCATGTATGACGCCGTTCTCCATGTGGCAACTTCTCTAACTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594229.1
ENST00000601575.5
CDS-3UTR CAA 90 bp TCACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGGAGGAGAGCTGCCGCCATCGCACTTCAGAGCGGGTaGGGACCCATGTGGTCCAAG +
Preference number: 5 (lower is better)
Translates to: SQQPRRQNLGFWRRAAAIALQSG*GPMWSK
Trigger: CTTGGACCACATGGGTCCCAACCCGCTCTGAAGTGC...GATGGCGGCAGCTCTCCTCCAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331256.10
ENST00000594229.1
ENST00000601575.5
CDS-3UTR CAA 90 bp TGGGTCCCGTTGAGGATGTGCAGCCGCGTATACCCGTACTCCTTCACACGCACGGCACTTCAGAGCGGGTaGGGACCCATGTGGTCCAAG +
Preference number: 5 (lower is better)
Translates to: WVPLRMCSRVYPYSFTRTALQSG*GPMWSK
Trigger: CTTGGACCACATGGGTCCCAACCCGCTCTGAAGTGC...CGTGCGTGTGAAGGAGTACGGGTATACGCGGCTGCACATCCTCAACGGGACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601575.5
CDS-3UTR CAA 90 bp GCTTCTGGAGGAGAGCTGCCGCCATCCCTAGAGGTACATCCTCCGGCCAAACAGCGGCTGCAACCCGAATaGCACTTCAGAGCGGGTTGG +
Preference number: 5 (lower is better)
Translates to: ASGGELPPSLEVHPPAKQRLQPE*HFRAGW
Trigger: CCAACCCGCTCTGAAGTGCAATTCGGGTTGCAGCCG...CTGTTTGGCCGGAGGATGTACCTCTAGGGATGGCGGCAGCTCTCCTCCAGAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594229.1
ENST00000601575.5
CDS-3UTR CAA 90 bp AGAGGAGGAAGCCCAGCGGCATCCCCCGCAGATGTGCAGAATCCATGGAGCCAGGCTGCCCGGTTCTTATaGGCTTTCTGGAGGTCGCTC +
Preference number: 5 (lower is better)
Translates to: RGGSPAASPADVQNPWSQAARFL*AFWRSL
Trigger: GAGCGACCTCCAGAAAGCCAATAAGAACCGGGCAGC...CTGGCTCCATGGATTCTGCACATCTGCGGGGGATGCCGCTGGGCTTCCTCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CAA 90 bp CCGCCATCCCTAGAGGTACATCCTCCGGCCAAACAGGGGTCTCACCACCCAGACGCTGCCCGGTTCTTATaGGCTTTCTGGAGGTCGCTC +
Preference number: 5 (lower is better)
Translates to: PPSLEVHPPAKQGSHHPDAARFL*AFWRSL
Trigger: GAGCGACCTCCAGAAAGCCAATAAGAACCGGGCAGC...GTCTGGGTGGTGAGACCCCTGTTTGGCCGGAGGATGTACCTCTAGGGATGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594229.1
ENST00000601575.5
CDS-3UTR CAA 90 bp TCACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGGAGGAGAGCTGCCGCCATCTCGTCCAGATCTGCGTaGGAGCAGTACATGGGCCGG +
Preference number: 5 (lower is better)
Translates to: SQQPRRQNLGFWRRAAAISSRSA*EQYMGR
Trigger: CCGGCCCATGTACTGCTCCAACGCAGATCTGGACGA...GATGGCGGCAGCTCTCCTCCAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331256.10
ENST00000594229.1
ENST00000601575.5
CDS-3UTR CAA 90 bp GATGTGCAGAATCCATGGAGCCAGAGCTTAAGCCTCTTCATTCCTGAAGCCCCGGGGACGGCCTTCGGGTaGTCAGCCCCCAGGTCTCCA +
Preference number: 5 (lower is better)
Translates to: DVQNPWSQSLSLFIPEAPGTAFG*SAPRSP
Trigger: TGGAGACCTGGGGGCTGACAACCCGAAGGCCGTCCC...CGGGGCTTCAGGAATGAAGAGGCTTAAGCTCTGGCTCCATGGATTCTGCACATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CAA 90 bp CTGCCTGGAATGCTCTTCCCCCAGATGTCTGCCCACTTGGCTCCTTCCCCACCTGCTGCCCGGTTCTTATaGGCTTTCTGGAGGTCGCTC +
Preference number: 5 (lower is better)
Translates to: LPGMLFPQMSAHLAPSPPAARFL*AFWRSL
Trigger: GAGCGACCTCCAGAAAGCCAATAAGAACCGGGCAGC...AGGTGGGGAAGGAGCCAAGTGGGCAGACATCTGGGGGAAGAGCATTCCAGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CAA 90 bp AGGCCTGGGCAGTTTCTGGTCACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGTCGTCCAGATCTGCGTaGGAGCAGTACATGGGCCGG +
Preference number: 5 (lower is better)
Translates to: RPGQFLVTAAKAAKPRLLSSRSA*EQYMGR
Trigger: CCGGCCCATGTACTGCTCCAACGCAGATCTGGACGA...CAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGTGACCAGAAACTGCCCAGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CAA 90 bp CTGGGCAGTTTCTGGTCACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGGAGGCCCGTACAGCTTGCCTaGGAGGCCTTTGCGGACCTT +
Preference number: 5 (lower is better)
Translates to: LGSFWSQQPRRQNLGFWRPVQLA*EAFADL
Trigger: AAGGTCCGCAAAGGCCTCCAAGGCAAGCTGTACGGG...CCTCCAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGTGACCAGAAACTGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CAA 90 bp TTCTGGAGGAGAGCTGCCGCCATCCCTAGAGGTACATCCTCCGGCCAAACAGGGAGGCCTTTGCGGACCTaGCTTTCATGTCGTGTGCAG +
Preference number: 5 (lower is better)
Translates to: FWRRAAAIPRGTSSGQTGRPLRT*LSCRVQ
Trigger: CTGCACACGACATGAAAGCAAGGTCCGCAAAGGCCT...CCCTGTTTGGCCGGAGGATGTACCTCTAGGGATGGCGGCAGCTCTCCTCCAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594229.1
ENST00000601575.5
CDS TCA 90 bp CACAGCGATAAACATACTGAACCCCTGGCAGCAGCTTGCGAAGCGTaGCTCGGTGTATGTAGAGCTTCCGCCGGAGAATGCCCCCGTCCA +
Preference number: 5 (lower is better)
Translates to: HSDKHTEPLAAACEA*LGVCRASAGECPRP
Trigger: TGGACGGGGGCATTCTCCGGCGGAAGCTCTACATACACCGAGTCACGCTTCGCAAGCTGCTGCCAGGGGTTCAGTATGTTTATCGCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331256.10
ENST00000594229.1
ENST00000601575.5
CDS-3UTR CAA 90 bp CCCACTTGGCTCCTTCCCCACCTCCTTCAGATCAAATGTTGCCCTCTCAGTGAGCGGCTGCAACCCGAATaGCACTTCAGAGCGGGTTGG +
Preference number: 5 (lower is better)
Translates to: PTWLLPHLLQIKCCPLSERLQPE*HFRAGW
Trigger: CCAACCCGCTCTGAAGTGCAATTCGGGTTGCAGCCG...CTCACTGAGAGGGCAACATTTGATCTGAAGGAGGTGGGGAAGGAGCCAAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CAA 90 bp GACTACAGATGTGAGTTACTGTACCCAGCCGGCCAGGCACATTTCTGTCTCAGGCAGTGGGCCCCATTCTaGAGGGCCCTGAAGCGGAAC +
Preference number: 5 (lower is better)
Translates to: DYRCELLYPAGQAHFCLRQWAPF*RALKRN
Trigger: GTTCCGCTTCAGGGCCCTCAAGAATGGGGCCCACTG...CCTGAGACAGAAATGTGCCTGGCCGGCTGGGTACAGTAACTCACATCTGTAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CAA 90 bp GTCACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGGAGGAGAGCTGCCGCCATTTGCCTTGGAGGCCTTaGCGGACCTTGCTTTCATGT +
Preference number: 5 (lower is better)
Translates to: VTAAKAAKPRLLEESCRHLPWRP*RTLLSC
Trigger: ACATGAAAGCAAGGTCCGCAAAGGCCTCCAAGGCAA...ATGGCGGCAGCTCTCCTCCAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331256.10
ENST00000594229.1
ENST00000601575.5
CDS-3UTR CAA 90 bp CCCACTTGGCTCCTTCCCCACCTCCTTCAGATCAAATGTTGCCCTCTCAGTGAGTCCAACCCGTACAGCTaGCCTTGGAGGCCTTTGCGG +
Preference number: 5 (lower is better)
Translates to: PTWLLPHLLQIKCCPLSESNPYS*PWRPLR
Trigger: CCGCAAAGGCCTCCAAGGCAAGCTGTACGGGTTGGA...CTCACTGAGAGGGCAACATTTGATCTGAAGGAGGTGGGGAAGGAGCCAAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CAA 90 bp TCACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGGAGGAGAGCTGCCGCCATCGCAAGTCTGTGGCTCTaGCGGTTTGTCATCTGTCCT +
Preference number: 5 (lower is better)
Translates to: SQQPRRQNLGFWRRAAAIASLWL*RFVICP
Trigger: AGGACAGATGACAAACCGCAAGAGCCACAGACTTGC...GATGGCGGCAGCTCTCCTCCAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS GCA 90 bp GCCTTTGCGGACCTTGCTTTCATGTCGTGTGCAGTCGTCCAGATCTaGGTTGGAGCAGTACATGGGCCGGTGCCCCATAGTGATGATCCA +
Preference number: 5 (lower is better)
Translates to: AFADLAFMSCAVVQI*VGAVHGPVPHSDDP
Trigger: TGGATCATCACTATGGGGCACCGGCCCATGTACTGCTCCAACGCAGATCTGGACGACTGCACACGACATGAAAGCAAGGTCCGCAAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331256.10
ENST00000594229.1
ENST00000601531.1
ENST00000601575.5
CDS-3UTR CAA 90 bp GGCAGTTTCTGGTCACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGGAGGAGAAGGCCTTTGCGGACCTaGCTTTCATGTCGTGTGCAG +
Preference number: 5 (lower is better)
Translates to: GSFWSQQPRRQNLGFWRRRPLRT*LSCRVQ
Trigger: CTGCACACGACATGAAAGCAAGGTCCGCAAAGGCCT...TCTCCTCCAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGTGACCAGAAACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CAA 90 bp GATGTGCAGAATCCATGGAGCCAGAGCTTAAGCCTCTTCATTCCTGAAGCCCCGCCCGTACAGCTTGCCTaGGAGGCCTTTGCGGACCTT +
Preference number: 5 (lower is better)
Translates to: DVQNPWSQSLSLFIPEAPPVQLA*EAFADL
Trigger: AAGGTCCGCAAAGGCCTCCAAGGCAAGCTGTACGGG...CGGGGCTTCAGGAATGAAGAGGCTTAAGCTCTGGCTCCATGGATTCTGCACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CAA 90 bp GGGCAGTTTCTGGTCACAGCAGCCAAGGCGGCAAAACCTAGGCTTCTGGAGGAGGCAAGTCTGTGGCTCTaGCGGTTTGTCATCTGTCCT +
Preference number: 5 (lower is better)
Translates to: GQFLVTAAKAAKPRLLEEASLWL*RFVICP
Trigger: AGGACAGATGACAAACCGCAAGAGCCACAGACTTGC...CTCCTCCAGAAGCCTAGGTTTTGCCGCCTTGGCTGCTGTGACCAGAAACTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CAA 90 bp CCTCTGCCTGGAATGCTCTTCCCCCAGATGTCTGCCCACTTGGCTCCTTCCCCACCTGGTAGTTGTAAATaGGCCACAGTCGTTCATACG +
Preference number: 5 (lower is better)
Translates to: PLPGMLFPQMSAHLAPSPPGSCK*ATVVHT
Trigger: CGTATGAACGACTGTGGCCAATTTACAACTACCAGG...TGGGGAAGGAGCCAAGTGGGCAGACATCTGGGGGAAGAGCATTCCAGGCAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CAA 90 bp CAGAATCCATGGAGCCAGAGCTTAAGCCTCTTCATTCCTGAAGCCCCGTGGGCATTGCCTTGGAGGCCTTaGCGGACCTTGCTTTCATGT +
Preference number: 5 (lower is better)
Translates to: QNPWSQSLSLFIPEAPWALPWRP*RTLLSC
Trigger: ACATGAAAGCAAGGTCCGCAAAGGCCTCCAAGGCAA...TGCCCACGGGGCTTCAGGAATGAAGAGGCTTAAGCTCTGGCTCCATGGATTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CAA 90 bp ACTGTACCCAGCCGGCCAGGCACATTTCTGTCTCAGGGCCTTTGCACTGGCTGTCCTGGTAGTTGTAAATaGGCCACAGTCGTTCATACG +
Preference number: 5 (lower is better)
Translates to: TVPSRPGTFLSQGLCTGCPGSCK*ATVVHT
Trigger: CGTATGAACGACTGTGGCCAATTTACAACTACCAGG...ACAGCCAGTGCAAAGGCCCTGAGACAGAAATGTGCCTGGCCGGCTGGGTACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CAA 90 bp GACTACAGATGTGAGTTACTGTACCCAGCCGGCCAGGCACATTTCTGTCTCAGGTTGCCTTGGAGGCCTTaGCGGACCTTGCTTTCATGT +
Preference number: 5 (lower is better)
Translates to: DYRCELLYPAGQAHFCLRLPWRP*RTLLSC
Trigger: ACATGAAAGCAAGGTCCGCAAAGGCCTCCAAGGCAA...CCTGAGACAGAAATGTGCCTGGCCGGCTGGGTACAGTAACTCACATCTGTAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CAA 90 bp CAAAACCTAGGCTTCTGGAGGAGAGCTGCCGCCATCCCTAGAGGTACATCCTCCCCTGGTAGTTGTAAATaGGCCACAGTCGTTCATACG +
Preference number: 5 (lower is better)
Translates to: QNLGFWRRAAAIPRGTSSPGSCK*ATVVHT
Trigger: CGTATGAACGACTGTGGCCAATTTACAACTACCAGG...GGAGGATGTACCTCTAGGGATGGCGGCAGCTCTCCTCCAGAAGCCTAGGTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594229.1
ENST00000601575.5
CDS-3UTR CAA 90 bp TTTTGTCCAACTCTCTGGTTAGGATGTCAGCTCTGTGAGGGCCGAGATCTCTGTAGGCCTTTGCGGACCTaGCTTTCATGTCGTGTGCAG +
Preference number: 5 (lower is better)
Translates to: FCPTLWLGCQLCEGRDLCRPLRT*LSCRVQ
Trigger: CTGCACACGACATGAAAGCAAGGTCCGCAAAGGCCT...ACAGAGATCTCGGCCCTCACAGAGCTGACATCCTAACCAGAGAGTTGGACAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS-3UTR CAA 90 bp TTTTGTCCAACTCTCTGGTTAGGATGTCAGCTCTGTGAGGGCCGAGATCTCTGTTGTGGCTCTTGCGGTTaGTCATCTGTCCTAGCTAGG +
Preference number: 5 (lower is better)
Translates to: FCPTLWLGCQLCEGRDLCCGSCG*SSVLAR
Trigger: CCTAGCTAGGACAGATGACAAACCGCAAGAGCCACA...ACAGAGATCTCGGCCCTCACAGAGCTGACATCCTAACCAGAGAGTTGGACAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601575.5
CDS GCA 72 bp GGAGAACGGCGTCATACATGCCCTGCTGGGTGTCCCTaGGCAGCCGGGGGACGGCCTTCGGGTTGTCAGCCC +
Preference number: 6 (lower is better)
Translates to: GERRHTCPAGCP*AAGGRPSGCQP
Trigger: GGGCTGACAACCCGAAGGCCGTCCCCCGGCTGCGCAGGGACACCCAGCAGGGCATGTATGACGCCGTTCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331256.10
ENST00000594229.1
ENST00000601531.1
ENST00000601575.5
CDS CCA 72 bp TCTCCCACATGGAGAACGGCGTCATACATGCCCTGCTaGGTGTCCCTGCGCAGCCGGGGGACGGCCTTCGGG +
Preference number: 6 (lower is better)
Translates to: SPTWRTASYMPC*VSLRSRGTAFG
Trigger: CCCGAAGGCCGTCCCCCGGCTGCGCAGGGACACCCAGCAGGGCATGTATGACGCCGTTCTCCATGTGGGAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601531.1
CDS CCA 72 bp GTTGCCACATGGAGAACGGCGTCATACATGCCCTGCTaGGTGTCCCTGCGCAGCCGGGGGACGGCCTTCGGG +
Preference number: 6 (lower is better)
Translates to: VATWRTASYMPC*VSLRSRGTAFG
Trigger: CCCGAAGGCCGTCCCCCGGCTGCGCAGGGACACCCAGCAGGGCATGTATGACGCCGTTCTCCATGTGGCAAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594229.1
ENST00000601575.5
CDS CAA 72 bp AACACAGCCAGACGGGGACTCCAGTGGGCCCCATTCTaGAGGGCCCTGAAGCGGAACCGACGGCTCCAGCCC +
Preference number: 6 (lower is better)
Translates to: NTARRGLQWAPF*RALKRNRRLQP
Trigger: GGGCTGGAGCCGTCGGTTCCGCTTCAGGGCCCTCAAGAATGGGGCCCACTGGAGTCCCCGTCTGGCTGTGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331256.10
ENST00000594229.1
ENST00000601575.5
CDS CAA 90 bp AGGTCTCCAAACACAGCCAGACGGGGACTCCAGTGGGCCCCATTCTaGAGGGCCCTGAAGCGGAACCGACGGCTCCAGCCCTGCGCACTG +
Preference number: 6 (lower is better)
Translates to: RSPNTARRGLQWAPF*RALKRNRRLQPCAL
Trigger: CAGTGCGCAGGGCTGGAGCCGTCGGTTCCGCTTCAGGGCCCTCAAGAATGGGGCCCACTGGAGTCCCCGTCTGGCTGTGTTTGGAGACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331256.10
ENST00000594229.1
ENST00000601575.5
CDS GCA 72 bp AAGTCTCCCACATGGAGAACGGCGTCATACATGCCCTaGTGGGTGTCCCTGCGCAGCCGGGGGACGGCCTTC +
Preference number: 6 (lower is better)
Translates to: KSPTWRTASYMP*WVSLRSRGTAF
Trigger: GAAGGCCGTCCCCCGGCTGCGCAGGGACACCCAGCAGGGCATGTATGACGCCGTTCTCCATGTGGGAGACTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601531.1
CDS GCA 72 bp AGGCAAAGTCTCCCACATGGAGAACGGCGTCATACATaGCCTGCTGGGTGTCCCTGCGCAGCCGGGGGACGG +
Preference number: 6 (lower is better)
Translates to: RQSLPHGERRHT*PAGCPCAAGGR
Trigger: CCGTCCCCCGGCTGCGCAGGGACACCCAGCAGGGCATGTATGACGCCGTTCTCCATGTGGGAGACTTTGCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331256.10
ENST00000601531.1
CDS GCA 72 bp TCGTCCAGATCTGCGTTGGAGCAGTACATGGGCCGGTaGCCCATAGTGATGATCCACGGCCGGGCTGCCCGG +
Preference number: 6 (lower is better)
Translates to: SSRSALEQYMGR*PIVMIHGRAAR
Trigger: CCGGGCAGCCCGGCCGTGGATCATCACTATGGGGCACCGGCCCATGTACTGCTCCAACGCAGATCTGGACGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331256.10
ENST00000594229.1
ENST00000601531.1
ENST00000601575.5
CDS GCA 72 bp GAAGTTGCCACATGGAGAACGGCGTCATACATGCCCTaGTGGGTGTCCCTGCGCAGCCGGGGGACGGCCTTC +
Preference number: 6 (lower is better)
Translates to: EVATWRTASYMP*WVSLRSRGTAF
Trigger: GAAGGCCGTCCCCCGGCTGCGCAGGGACACCCAGCAGGGCATGTATGACGCCGTTCTCCATGTGGCAACTTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594229.1
ENST00000601575.5
CDS CCA 72 bp GACAACAGAGGCAGGGCAGGGAGGTCTCCTTCAAGATaGGTGGTTATCCAGGTGCCTCGGGGGCGCCGGCTG +
Preference number: 6 (lower is better)
Translates to: DNRGRAGRSPSR*VVIQVPRGRRL
Trigger: CAGCCGGCGCCCCCGAGGCACCTGGATAACCACCCATCTTGAAGGAGACCTCCCTGCCCTGCCTCTGTTGTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331256.10
CDS GCA 72 bp GGGCCGGTGCCCCATAGTGATGATCCACGGCCGGGCTaGCCGGTTCTTATTGGCTTTCTGGAGGTCGCTCTC +
Preference number: 6 (lower is better)
Translates to: GPVPHSDDPRPG*PVLIGFLEVAL
Trigger: GAGAGCGACCTCCAGAAAGCCAATAAGAACCGGGCAGCCCGGCCGTGGATCATCACTATGGGGCACCGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331256.10
ENST00000594229.1
ENST00000601531.1
ENST00000601575.5
CDS CCA 72 bp CCCAGGTCTCCAAACACAGCCAGACGGGGACTCCAGTaGGCCCCATTCTTGAGGGCCCTGAAGCGGAACCGA +
Preference number: 6 (lower is better)
Translates to: PRSPNTARRGLQ*APFLRALKRNR
Trigger: TCGGTTCCGCTTCAGGGCCCTCAAGAATGGGGCCCACTGGAGTCCCCGTCTGGCTGTGTTTGGAGACCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331256.10
ENST00000594229.1
ENST00000601575.5
CDS GCA 72 bp TTAGAGAAGTTGCCACATGGAGAACGGCGTCATACATaGCCTGCTGGGTGTCCCTGCGCAGCCGGGGGACGG +
Preference number: 6 (lower is better)
Translates to: LEKLPHGERRHT*PAGCPCAAGGR
Trigger: CCGTCCCCCGGCTGCGCAGGGACACCCAGCAGGGCATGTATGACGCCGTTCTCCATGTGGCAACTTCTCTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594229.1
ENST00000601575.5
CDS CAA 90 bp TTGCGGACCTTGCTTTCATGTCGTGTGCAGTCGTCCAGATCTGCGTaGGAGCAGTACATGGGCCGGTGCCCCATAGTGATGATCCACGGC +
Preference number: 6 (lower is better)
Translates to: LRTLLSCRVQSSRSA*EQYMGRCPIVMIHG
Trigger: GCCGTGGATCATCACTATGGGGCACCGGCCCATGTACTGCTCCAACGCAGATCTGGACGACTGCACACGACATGAAAGCAAGGTCCGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331256.10
ENST00000594229.1
ENST00000601531.1
ENST00000601575.5
CDS CCA 72 bp CGACGGCTGCAACCCGAATTGCACTTCAGAGCGGGTTaGGACCCATGTGGTCCAAGTTACAGTCATGGAGCC +
Preference number: 6 (lower is better)
Translates to: RRLQPELHFRAG*DPCGPSYSHGA
Trigger: GGCTCCATGACTGTAACTTGGACCACATGGGTCCCAACCCGCTCTGAAGTGCAATTCGGGTTGCAGCCGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331256.10
ENST00000594229.1
ENST00000601575.5
CDS GCA 72 bp GACCTTGCTTTCATGTCGTGTGCAGTCGTCCAGATCTaGGTTGGAGCAGTACATGGGCCGGTGCCCCATAGT +
Preference number: 6 (lower is better)
Translates to: DLAFMSCAVVQI*VGAVHGPVPHS
Trigger: ACTATGGGGCACCGGCCCATGTACTGCTCCAACGCAGATCTGGACGACTGCACACGACATGAAAGCAAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331256.10
ENST00000594229.1
ENST00000601531.1
ENST00000601575.5
CDS TCA 72 bp AAACATACTGAACCCCTGGCAGCAGCTTGCGAAGCGTaGCTCGGTGTATGTAGAGCTTCCGCCGGAGAATGC +
Preference number: 6 (lower is better)
Translates to: KHTEPLAAACEA*LGVCRASAGEC
Trigger: GCATTCTCCGGCGGAAGCTCTACATACACCGAGTCACGCTTCGCAAGCTGCTGCCAGGGGTTCAGTATGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331256.10
ENST00000594229.1
ENST00000601575.5
CDS GCA 72 bp CTTGGAGGCCTTTGCGGACCTTGCTTTCATGTCGTGTaGAGTCGTCCAGATCTGCGTTGGAGCAGTACATGG +
Preference number: 6 (lower is better)
Translates to: LGGLCGPCFHVV*SRPDLRWSSTW
Trigger: CCATGTACTGCTCCAACGCAGATCTGGACGACTGCACACGACATGAAAGCAAGGTCCGCAAAGGCCTCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331256.10
ENST00000594229.1
ENST00000601531.1
ENST00000601575.5
CDS CCA 72 bp CTGCGCACTGCCACAGCGATAAACATACTGAACCCCTaGCAGCAGCTTGCGAAGCGTGACTCGGTGTATGTA +
Preference number: 6 (lower is better)
Translates to: LRTATAINILNP*QQLAKRDSVYV
Trigger: TACATACACCGAGTCACGCTTCGCAAGCTGCTGCCAGGGGTTCAGTATGTTTATCGCTGTGGCAGTGCGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331256.10
ENST00000594229.1
ENST00000601575.5
CDS CAA 72 bp TTGCTTTCATGTCGTGTGCAGTCGTCCAGATCTGCGTaGGAGCAGTACATGGGCCGGTGCCCCATAGTGATG +
Preference number: 6 (lower is better)
Translates to: LLSCRVQSSRSA*EQYMGRCPIVM
Trigger: CATCACTATGGGGCACCGGCCCATGTACTGCTCCAACGCAGATCTGGACGACTGCACACGACATGAAAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331256.10
ENST00000594229.1
ENST00000601531.1
ENST00000601575.5
CDS CAA 72 bp TTTGTAGAAAAGATCCTCCAACCCGTACAGCTTGCCTaGGAGGCCTTTGCGGACCTTGCTTTCATGTCGTGT +
Preference number: 6 (lower is better)
Translates to: FVEKILQPVQLA*EAFADLAFMSC
Trigger: ACACGACATGAAAGCAAGGTCCGCAAAGGCCTCCAAGGCAAGCTGTACGGGTTGGAGGATCTTTTCTACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331256.10
ENST00000594229.1
ENST00000601531.1
ENST00000601575.5
CDS GCA 72 bp CATATTTGTAGAAAAGATCCTCCAACCCGTACAGCTTaGCTTGGAGGCCTTTGCGGACCTTGCTTTCATGTC +
Preference number: 6 (lower is better)
Translates to: HICRKDPPTRTA*LGGLCGPCFHV
Trigger: GACATGAAAGCAAGGTCCGCAAAGGCCTCCAAGGCAAGCTGTACGGGTTGGAGGATCTTTTCTACAAATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331256.10
ENST00000594229.1
ENST00000601531.1
ENST00000601575.5
CDS CCA 72 bp ATCATCTACGATCTTCCCATCCTGGTAGTTGTAAATTaGCCACAGTCGTTCATACGAGTGCTCATGAGCCCA +
Preference number: 6 (lower is better)
Translates to: IIYDLPILVVVN*PQSFIRVLMSP
Trigger: TGGGCTCATGAGCACTCGTATGAACGACTGTGGCCAATTTACAACTACCAGGATGGGAAGATCGTAGATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601531.1