RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ACP3 (Homo sapiens)

Ensembl gene IDs: ENSG00000014257

Ensembl transcript IDs: ENST00000336375.10, ENST00000351273.11, ENST00000475741.5, ENST00000483689.1, ENST00000489084.5, ENST00000493235.5, ENST00000495911.5, ENST00000507647.1, ENST00000512463.1

Found 244 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTGTTCATCCAGCAGCAGCCTGTGGGTCACTGTGAGTTCAGACCCTaGTCTGGGCAGATTCAAAAGGCAGGGTGTGAGGATGGCAATGCC +
Preference number: 1 (lower is better)
Translates to: VFIQQQPVGHCEFRP*SGQIQKAGCEDGNA
Trigger: GGCATTGCCATCCTCACACCCTGCCTTTTGAATCTGCCCAGAGCAGGGTCTGAACTCACAGTGACCCACAGGCTGCTGCTGGATGAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000351273.11
3UTR TCA 90 bp AGCCTCTTTCTAGCTGAACAAGCAGCCTGCACTACCACTCCATTATaGGAAGACCTAGGTAGCCTGAGTGTTCATCCAGCAGCAGCCTGT +
Preference number: 1 (lower is better)
Translates to: SLFLAEQAACTTTPL*EDLGSLSVHPAAAC
Trigger: ACAGGCTGCTGCTGGATGAACACTCAGGCTACCTAGGTCTTCTCATAATGGAGTGGTAGTGCAGGCTGCTTGTTCAGCTAGAAAGAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000351273.11
3UTR GCA 90 bp TCAAAGCTGGGGGTAATGGCCAAAGTATGTTCTCAAAGCATCATCTaGCCTGAGAAAGGGCAGCTACTCCTTCTACAGAGATCTCTGTGC +
Preference number: 1 (lower is better)
Translates to: SKLGVMAKVCSQSII*PEKGQLLLLQRSLC
Trigger: GCACAGAGATCTCTGTAGAAGGAGTAGCTGCCCTTTCTCAGGGCAGATGATGCTTTGAGAACATACTTTGGCCATTACCCCCAGCTTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000475741.5
3UTR CCA 90 bp ATCGATGTCTTTGTCAGTCATTCTGTGACCAACCAGGAGCGGGGATaGCTTTGCTCTAGATTCTGGCAGCCAGTAGAAACCATCTCTAGA +
Preference number: 1 (lower is better)
Translates to: IDVFVSHSVTNQERG*LCSRFWQPVETISR
Trigger: TCTAGAGATGGTTTCTACTGGCTGCCAGAATCTAGAGCAAAGCCATCCCCGCTCCTGGTTGGTCACAGAATGACTGACAAAGACATCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000507647.1
3UTR TCA 90 bp GTCTTTGTCCACCTTCTCACCCTTCACTCTTTGCAGGTAAAAGGCTaGTTGGAGTTTGGCTTCTTATTTCTCTCCGGACAACTGTGGCAG +
Preference number: 1 (lower is better)
Translates to: VFVHLLTLHSLQVKG*LEFGFLFLSGQLWQ
Trigger: CTGCCACAGTTGTCCGGAGAGAAATAAGAAGCCAAACTCCAATCAGCCTTTTACCTGCAAAGAGTGAAGGGTGAGAAGGTGGACAAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000351273.11
3UTR CCA 90 bp CATTCTGTGACCAACCAGGAGCGGGGATGGCTTTGCTCTAGATTCTaGCAGCCAGTAGAAACCATCTCTAGAAACCATCTCATCTTTATC +
Preference number: 1 (lower is better)
Translates to: HSVTNQERGWLCSRF*QPVETISRNHLIFI
Trigger: GATAAAGATGAGATGGTTTCTAGAGATGGTTTCTACTGGCTGCCAGAATCTAGAGCAAAGCCATCCCCGCTCCTGGTTGGTCACAGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336375.10
3UTR TCA 90 bp GTGTTCTCTAGACATGTAGATCTGCCACATGGCAAAGCTATATCATaGTTTCTTCTTGCAGAGTGGGCAGTTTCAGCAGGACCTGTAAGT +
Preference number: 1 (lower is better)
Translates to: VFSRHVDLPHGKAIS*FLLAEWAVSAGPVS
Trigger: ACTTACAGGTCCTGCTGAAACTGCCCACTCTGCAAGAAGAAATCATGATATAGCTTTGCCATGTGGCAGATCTACATGTCTAGAGAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336375.10
3UTR GCA 90 bp TCTAGAGAAACTCCATCACGTGGTGCTCTCTTTCCTGATGTGTTGTaGCCAAATAGCTTGTTCTCATCAGATGACTTATTTGCTATGATA +
Preference number: 1 (lower is better)
Translates to: SRETPSRGALFPDVL*PNSLFSSDDLFAMI
Trigger: TATCATAGCAAATAAGTCATCTGATGAGAACAAGCTATTTGGGCACAACACATCAGGAAAGAGAGCACCACGTGATGGAGTTTCTCTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336375.10
3UTR-3UTR GCA 90 bp GAATACAACCATCCTATGCATAACAGCCTCTTTCTAGCTGAACAAGCAGCCTGCGGCACCACTGAGAGATaGTGTGTCACAGGAGGTTGG +
Preference number: 2 (lower is better)
Translates to: EYNHPMHNSLFLAEQAACGTTER*CVTGGW
Trigger: CCAACCTCCTGTGACACAGCATCTCTCAGTGGTGCC...GCAGGCTGCTTGTTCAGCTAGAAAGAGGCTGTTATGCATAGGATGGTTGTATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000351273.11
3UTR-3UTR GCA 90 bp CATCCTATGCATAACAGCCTCTTTCTAGCTGAACAAGCAGCCTGCACTACCACTAGCCTGTCCTTTAGATaGGGCACCACTGAGAGATGC +
Preference number: 2 (lower is better)
Translates to: HPMHNSLFLAEQAACTTTSLSFR*GTTERC
Trigger: GCATCTCTCAGTGGTGCCGCATCTAAAGGACAGGCT...AGTGGTAGTGCAGGCTGCTTGTTCAGCTAGAAAGAGGCTGTTATGCATAGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000351273.11
3UTR-3UTR CCA 90 bp TTGGAGTTTGGCTTCTTATTTCTCTCCGGACAACTGTGGCAGAGAATACAACCATCCAGCAGCAGCCTGTaGGTCACTGTGAGTTCAGAC +
Preference number: 2 (lower is better)
Translates to: LEFGFLFLSGQLWQRIQPSSSSL*VTVSSD
Trigger: GTCTGAACTCACAGTGACCCACAGGCTGCTGCTGGA...TGGTTGTATTCTCTGCCACAGTTGTCCGGAGAGAAATAAGAAGCCAAACTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000351273.11
3UTR-3UTR TCA 90 bp GATTGGAGTTTGGCTTCTTATTTCTCTCCGGACAACTGTGGCAGAGAATACAACTCAAAAGGCAGGGTGTaGGGATGGCAATGCCCACAT +
Preference number: 2 (lower is better)
Translates to: DWSLASYFSPDNCGREYNSKGRV*GWQCPH
Trigger: ATGTGGGCATTGCCATCCTCACACCCTGCCTTTTGA...GTTGTATTCTCTGCCACAGTTGTCCGGAGAGAAATAAGAAGCCAAACTCCAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000351273.11
3UTR-3UTR GCA 90 bp TTTGTCAGTCATTCTGTGACCAACCAGGAGCGGGGATGGCTTTGCTCTAGATTCCTCGGACTCCCAAAATaGTGGGATTATAGGCGTAAA +
Preference number: 2 (lower is better)
Translates to: FVSHSVTNQERGWLCSRFLGLPK*WDYRRK
Trigger: TTTACGCCTATAATCCCAGCATTTTGGGAGTCCGAG...GAATCTAGAGCAAAGCCATCCCCGCTCCTGGTTGGTCACAGAATGACTGACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336375.10
3UTR-3UTR CCA 90 bp TTGGAGTTTGGCTTCTTATTTCTCTCCGGACAACTGTGGCAGAGAATACAACCAGTTCAGACCCTGCTCTaGGCAGATTCAAAAGGCAGG +
Preference number: 2 (lower is better)
Translates to: LEFGFLFLSGQLWQRIQPVQTLL*ADSKGR
Trigger: CCTGCCTTTTGAATCTGCCCAGAGCAGGGTCTGAAC...TGGTTGTATTCTCTGCCACAGTTGTCCGGAGAGAAATAAGAAGCCAAACTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000351273.11
3UTR-3UTR GCA 90 bp GAATACAACCATCCTATGCATAACAGCCTCTTTCTAGCTGAACAAGCAGCCTGCTGTGAGTTCAGACCCTaGTCTGGGCAGATTCAAAAG +
Preference number: 2 (lower is better)
Translates to: EYNHPMHNSLFLAEQAACCEFRP*SGQIQK
Trigger: CTTTTGAATCTGCCCAGAGCAGGGTCTGAACTCACA...GCAGGCTGCTTGTTCAGCTAGAAAGAGGCTGTTATGCATAGGATGGTTGTATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000351273.11
3UTR CAA 90 bp GCTTCTAGAGAAACTCCATCACGTGGTGCTCTCTTTCCTGATGTGTaGTGCCCAAATAGCTTGTTCTCATCAGATGACTTATTTGCTATG +
Preference number: 2 (lower is better)
Translates to: ASRETPSRGALFPDV*CPNSLFSSDDLFAM
Trigger: CATAGCAAATAAGTCATCTGATGAGAACAAGCTATTTGGGCACAACACATCAGGAAAGAGAGCACCACGTGATGGAGTTTCTCTAGAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336375.10
3UTR-3UTR TCA 90 bp CATTTACTTGGGAGGGAAATAACACAAAGAAGCATATCAATCGATGTCTTTGTCAAGCATCATCTGCCCTaGGAAAGGGCAGCTACTCCT +
Preference number: 2 (lower is better)
Translates to: HLLGREITQRSISIDVFVKHHLP*ERAATP
Trigger: AGGAGTAGCTGCCCTTTCTCAGGGCAGATGATGCTT...GACAAAGACATCGATTGATATGCTTCTTTGTGTTATTTCCCTCCCAAGTAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336375.10
3UTR-3UTR TCA 90 bp GTAAGTTTGCTTAGGTTTTCTGAAGATATCGGCATTAAAGACTTACACATTCCTACACCAGGCCTAAAGTaGTCCTCCTGCCTCAGCCTT +
Preference number: 2 (lower is better)
Translates to: VSLLRFSEDIGIKDLHIPTPGLK*SSCLSL
Trigger: AAGGCTGAGGCAGGAGGATCACTTTAGGCCTGGTGT...AGGAATGTGTAAGTCTTTAATGCCGATATCTTCAGAAAACCTAAGCAAACTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336375.10
3UTR-3UTR GCA 90 bp GCAGTTTCAGCAGGACCTGTAAGTTTGCTTAGGTTTTCTGAAGATATCGGCATTCTCAGCCTTCCAAAATaGAAGGATTACAGGTGTGAG +
Preference number: 2 (lower is better)
Translates to: AVSAGPVSLLRFSEDIGILSLPK*KDYRCE
Trigger: CTCACACCTGTAATCCTTGCATTTTGGAAGGCTGAG...AATGCCGATATCTTCAGAAAACCTAAGCAAACTTACAGGTCCTGCTGAAACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336375.10
3UTR-3UTR CCA 90 bp GGGTCTTCTTTCGTAAGAATCACCCTGTATAATAATACTTCTAGTCTAACTTCCTGTGTCACAGGAGGTTaGCCTGGCTTATCCAGCTGT +
Preference number: 2 (lower is better)
Translates to: GSSFVRITLYNNTSSLTSCVTGG*PGLSSC
Trigger: ACAGCTGGATAAGCCAGGCCAACCTCCTGTGACACA...GGAAGTTAGACTAGAAGTATTATTATACAGGGTGATTCTTACGAAAGAAGACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000351273.11
3UTR-3UTR CCA 90 bp AGAATCACCCTGTATAATAATACTTCTAGTCTAACTTCCCCCAATATCCAGTATCTCTCCGGACAACTGTaGCAGAGAATACAACCATCC +
Preference number: 2 (lower is better)
Translates to: RITLYNNTSSLTSPNIQYLSGQL*QRIQPS
Trigger: GGATGGTTGTATTCTCTGCCACAGTTGTCCGGAGAG...ATACTGGATATTGGGGGAAGTTAGACTAGAAGTATTATTATACAGGGTGATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000351273.11
3UTR-3UTR TCA 90 bp AGAATCACCCTGTATAATAATACTTCTAGTCTAACTTCCCCCAATATCCAGTATACTACCACTCCATTATaGGAAGACCTAGGTAGCCTG +
Preference number: 2 (lower is better)
Translates to: RITLYNNTSSLTSPNIQYTTTPL*EDLGSL
Trigger: CAGGCTACCTAGGTCTTCTCATAATGGAGTGGTAGT...ATACTGGATATTGGGGGAAGTTAGACTAGAAGTATTATTATACAGGGTGATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000351273.11
3UTR CAA 90 bp CCATCACGTGGTGCTCTCTTTCCTGATGTGTTGTGCCCAAATAGCTaGTTCTCATCAGATGACTTATTTGCTATGATATATATACTTCAA +
Preference number: 2 (lower is better)
Translates to: PSRGALFPDVLCPNS*FSSDDLFAMIYILQ
Trigger: TTGAAGTATATATATCATAGCAAATAAGTCATCTGATGAGAACAAGCTATTTGGGCACAACACATCAGGAAAGAGAGCACCACGTGATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336375.10
3UTR-3UTR CCA 90 bp GTAAGTTTGCTTAGGTTTTCTGAAGATATCGGCATTAAAGACTTACACATTCCTGGACTCCCAAAATGCTaGGATTATAGGCGTAAACCA +
Preference number: 2 (lower is better)
Translates to: VSLLRFSEDIGIKDLHIPGLPKC*DYRRKP
Trigger: TGGTTTACGCCTATAATCCCAGCATTTTGGGAGTCC...AGGAATGTGTAAGTCTTTAATGCCGATATCTTCAGAAAACCTAAGCAAACTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336375.10
3UTR GCA 72 bp CAGCAGCAGCCTGTGGGTCACTGTGAGTTCAGACCCTaGTCTGGGCAGATTCAAAAGGCAGGGTGTGAGGAT +
Preference number: 3 (lower is better)
Translates to: QQQPVGHCEFRP*SGQIQKAGCED
Trigger: ATCCTCACACCCTGCCTTTTGAATCTGCCCAGAGCAGGGTCTGAACTCACAGTGACCCACAGGCTGCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000351273.11
3UTR GCA 72 bp AAAAGCCTGTCCTTTAGATGCGGCACCACTGAGAGATaGTGTGTCACAGGAGGTTGGCCTGGCTTATCCAGC +
Preference number: 3 (lower is better)
Translates to: KSLSFRCGTTER*CVTGGWPGLSS
Trigger: GCTGGATAAGCCAGGCCAACCTCCTGTGACACAGCATCTCTCAGTGGTGCCGCATCTAAAGGACAGGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000351273.11
3UTR CCA 72 bp ACCAACCAGGAGCGGGGATGGCTTTGCTCTAGATTCTaGCAGCCAGTAGAAACCATCTCTAGAAACCATCTC +
Preference number: 3 (lower is better)
Translates to: TNQERGWLCSRF*QPVETISRNHL
Trigger: GAGATGGTTTCTAGAGATGGTTTCTACTGGCTGCCAGAATCTAGAGCAAAGCCATCCCCGCTCCTGGTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000507647.1
3UTR CCA 72 bp TTTGTCAGTCATTCTGTGACCAACCAGGAGCGGGGATaGCTTTGCTCTAGATTCTGGCAGCCAGTAGAAACC +
Preference number: 3 (lower is better)
Translates to: FVSHSVTNQERG*LCSRFWQPVET
Trigger: GGTTTCTACTGGCTGCCAGAATCTAGAGCAAAGCCATCCCCGCTCCTGGTTGGTCACAGAATGACTGACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000507647.1
3UTR TCA 72 bp CTAGCTGAACAAGCAGCCTGCACTACCACTCCATTATaGGAAGACCTAGGTAGCCTGAGTGTTCATCCAGCA +
Preference number: 3 (lower is better)
Translates to: LAEQAACTTTPL*EDLGSLSVHPA
Trigger: TGCTGGATGAACACTCAGGCTACCTAGGTCTTCTCATAATGGAGTGGTAGTGCAGGCTGCTTGTTCAGCTAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000351273.11
3UTR GCA 72 bp GGGGTAATGGCCAAAGTATGTTCTCAAAGCATCATCTaGCCTGAGAAAGGGCAGCTACTCCTTCTACAGAGA +
Preference number: 3 (lower is better)
Translates to: GVMAKVCSQSII*PEKGQLLLLQR
Trigger: TCTCTGTAGAAGGAGTAGCTGCCCTTTCTCAGGGCAGATGATGCTTTGAGAACATACTTTGGCCATTACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000475741.5
3UTR TCA 72 bp GAAGCATATCAATCGATGTCTTTGTCAGTCATTCTGTaGCCAACCAGGAGCGGGGATGGCTTTGCTCTAGAT +
Preference number: 3 (lower is better)
Translates to: EAYQSMSLSVIL*PTRSGDGFALD
Trigger: ATCTAGAGCAAAGCCATCCCCGCTCCTGGTTGGTCACAGAATGACTGACAAAGACATCGATTGATATGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000507647.1
3UTR TCA 72 bp CACCTTCTCACCCTTCACTCTTTGCAGGTAAAAGGCTaGTTGGAGTTTGGCTTCTTATTTCTCTCCGGACAA +
Preference number: 3 (lower is better)
Translates to: HLLTLHSLQVKG*LEFGFLFLSGQ
Trigger: TTGTCCGGAGAGAAATAAGAAGCCAAACTCCAATCAGCCTTTTACCTGCAAAGAGTGAAGGGTGAGAAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000351273.11
3UTR-3UTR CAA 90 bp AGAATCACCCTGTATAATAATACTTCTAGTCTAACTTCCCCCAATATCCAGTATCTGTGTCACAGGAGGTaGGCCTGGCTTATCCAGCTG +
Preference number: 3 (lower is better)
Translates to: RITLYNNTSSLTSPNIQYLCHRR*AWLIQL
Trigger: CAGCTGGATAAGCCAGGCCAACCTCCTGTGACACAG...ATACTGGATATTGGGGGAAGTTAGACTAGAAGTATTATTATACAGGGTGATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000351273.11
3UTR GCA 72 bp TCTGCCACATGGCAAAGCTATATCATGATTTCTTCTTaGAGAGTGGGCAGTTTCAGCAGGACCTGTAAGTTT +
Preference number: 3 (lower is better)
Translates to: SATWQSYIMISS*RVGSFSRTCKF
Trigger: AAACTTACAGGTCCTGCTGAAACTGCCCACTCTGCAAGAAGAAATCATGATATAGCTTTGCCATGTGGCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR TCA 90 bp AGTCATTCTGTGACCAACCAGGAGCGGGGATGGCTTTGCTCTAGATTCTGGCAGTGCAGCCAGGTAGCATaGGGGGATACGGCTCGTGCT +
Preference number: 4 (lower is better)
Translates to: SHSVTNQERGWLCSRFWQCSQVA*GDTARA
Trigger: AGCACGAGCCGTATCCCCTCATGCTACCTGGCTGCA...CTGCCAGAATCTAGAGCAAAGCCATCCCCGCTCCTGGTTGGTCACAGAATGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000507647.1
CDS-3UTR TCA 90 bp TTTAGATGCGGCACCACTGAGAGATGCTGTGTCACAGGAGGTTGGCCTGGCTTATCCGTGGACCAGTCTTaGGGGATCACAGGGCCAACC +
Preference number: 4 (lower is better)
Translates to: FRCGTTERCCVTGGWPGLSVDQS*GITGPT
Trigger: GGTTGGCCCTGTGATCCCTCAAGACTGGTCCACGGA...TAAGCCAGGCCAACCTCCTGTGACACAGCATCTCTCAGTGGTGCCGCATCTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000351273.11
CDS-3UTR TCA 90 bp GTCAGTCATTCTGTGACCAACCAGGAGCGGGGATGGCTTTGCTCTAGATTCTGGGGGGGCAGGGTCAGGTaGAGAGGTAGGAATTGCCTG +
Preference number: 4 (lower is better)
Translates to: VSHSVTNQERGWLCSRFWGGRVR*RGRNCL
Trigger: CAGGCAATTCCTACCTCTTCACCTGACCCTGCCCCC...CCAGAATCTAGAGCAAAGCCATCCCCGCTCCTGGTTGGTCACAGAATGACTGAC
57% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR CCA 90 bp GCCTGTCCTTTAGATGCGGCACCACTGAGAGATGCTGTGTCACAGGAGGTTGGCTGCTCCATGCCCAGCTaGGTGAGTTGGCCAAATCCT +
Preference number: 4 (lower is better)
Translates to: ACPLDAAPLRDAVSQEVGCSMPS*VSWPNP
Trigger: AGGATTTGGCCAACTCACCCAGCTGGGCATGGAGCA...GCCAACCTCCTGTGACACAGCATCTCTCAGTGGTGCCGCATCTAAAGGACAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000351273.11
CDS-3UTR GCA 90 bp GGTCACTGTGAGTTCAGACCCTGCTCTGGGCAGATTCAAAAGGCAGGGTGTGAGGGCACCACTGAGAGATaGTGTGTCACAGGAGGTTGG +
Preference number: 4 (lower is better)
Translates to: GHCEFRPCSGQIQKAGCEGTTER*CVTGGW
Trigger: CCAACCTCCTGTGACACAGCATCTCTCAGTGGTGCC...CTCACACCCTGCCTTTTGAATCTGCCCAGAGCAGGGTCTGAACTCACAGTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000351273.11
CDS-3UTR CCA 90 bp TTCAGACCCTGCTCTGGGCAGATTCAAAAGGCAGGGTGTGAGGATGGCAATGCCTCCAGCAGCAGCCTGTaGGTCACTGTGAGTTCAGAC +
Preference number: 4 (lower is better)
Translates to: FRPCSGQIQKAGCEDGNASSSSL*VTVSSD
Trigger: GTCTGAACTCACAGTGACCCACAGGCTGCTGCTGGA...GGCATTGCCATCCTCACACCCTGCCTTTTGAATCTGCCCAGAGCAGGGTCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000351273.11
CDS-3UTR TCA 90 bp ATCATCTGCCCTGAGAAAGGGCAGCTACTCCTTCTACAGAGATCTCTGTGCACATGCAGCCAGGTAGCATaGGGGGATACGGCTCGTGCT +
Preference number: 4 (lower is better)
Translates to: IICPEKGQLLLLQRSLCTCSQVA*GDTARA
Trigger: AGCACGAGCCGTATCCCCTCATGCTACCTGGCTGCA...TGTGCACAGAGATCTCTGTAGAAGGAGTAGCTGCCCTTTCTCAGGGCAGATGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000475741.5
CDS-3UTR TCA 90 bp TTTGTCAGTCATTCTGTGACCAACCAGGAGCGGGGATGGCTTTGCTCTAGATTCTCCGTGGACCAGTCTTaGGGGATCACAGGGCCAACC +
Preference number: 4 (lower is better)
Translates to: FVSHSVTNQERGWLCSRFSVDQS*GITGPT
Trigger: GGTTGGCCCTGTGATCCCTCAAGACTGGTCCACGGA...GAATCTAGAGCAAAGCCATCCCCGCTCCTGGTTGGTCACAGAATGACTGACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000507647.1
CDS-3UTR TCA 90 bp TTCAGACCCTGCTCTGGGCAGATTCAAAAGGCAGGGTGTGAGGATGGCAATGCCTCAAAAGGCAGGGTGTaGGGATGGCAATGCCCACAT +
Preference number: 4 (lower is better)
Translates to: FRPCSGQIQKAGCEDGNASKGRV*GWQCPH
Trigger: ATGTGGGCATTGCCATCCTCACACCCTGCCTTTTGA...GGCATTGCCATCCTCACACCCTGCCTTTTGAATCTGCCCAGAGCAGGGTCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000351273.11
CDS-3UTR TCA 90 bp TTCAGACCCTGCTCTGGGCAGATTCAAAAGGCAGGGTGTGAGGATGGCAATGCCCAGCCTCTTTCTAGCTaGACAAGCAGCCTGCACTAC +
Preference number: 4 (lower is better)
Translates to: FRPCSGQIQKAGCEDGNAQPLSS*TSSLHY
Trigger: GTAGTGCAGGCTGCTTGTTCAGCTAGAAAGAGGCTG...GGCATTGCCATCCTCACACCCTGCCTTTTGAATCTGCCCAGAGCAGGGTCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000351273.11
CDS-3UTR GCA 90 bp CTCAAAGCATCATCTGCCCTGAGAAAGGGCAGCTACTCCTTCTACAGAGATCTCGGCCAGGAGGAGGGGTaGAGCTCTCATGTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: LKASSALRKGSYSFYRDLGQEEG*SSHVEE
Trigger: CTCCTCAACATGAGAGCTGCACCCCTCCTCCTGGCC...GAGATCTCTGTAGAAGGAGTAGCTGCCCTTTCTCAGGGCAGATGATGCTTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000475741.5
CDS-3UTR GCA 90 bp ATCGATGTCTTTGTCAGTCATTCTGTGACCAACCAGGAGCGGGGATGGCTTTGCGAAAGAGGAACTGTGTaGACCGGGATGGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: IDVFVSHSVTNQERGWLCERGTV*TGMGCQ
Trigger: CTGGCAGCCCATCCCGGTGCACACAGTTCCTCTTTC...GCAAAGCCATCCCCGCTCCTGGTTGGTCACAGAATGACTGACAAAGACATCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR GCA 90 bp GGTCACTGTGAGTTCAGACCCTGCTCTGGGCAGATTCAAAAGGCAGGGTGTGAGAGCCTGTCCTTTAGATaGGGCACCACTGAGAGATGC +
Preference number: 4 (lower is better)
Translates to: GHCEFRPCSGQIQKAGCESLSFR*GTTERC
Trigger: GCATCTCTCAGTGGTGCCGCATCTAAAGGACAGGCT...CTCACACCCTGCCTTTTGAATCTGCCCAGAGCAGGGTCTGAACTCACAGTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000351273.11
CDS-3UTR CCA 90 bp GAGCGGGGATGGCTTTGCTCTAGATTCTGGCAGCCAGTAGAAACCATCTCTAGAGATGCTGACACCTTCTaGGGGAAACAGGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: ERGWLCSRFWQPVETISRDADTF*GKQGCQ
Trigger: CTGGCAGCCCTGTTTCCCCCAGAAGGTGTCAGCATC...TCTAGAGATGGTTTCTACTGGCTGCCAGAATCTAGAGCAAAGCCATCCCCGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR TCA 90 bp ATCATCTGCCCTGAGAAAGGGCAGCTACTCCTTCTACAGAGATCTCTGTGCACACCATGCCCAGCTGGGTaGGTTGGCCAAATCCTTGTG +
Preference number: 4 (lower is better)
Translates to: IICPEKGQLLLLQRSLCTPCPAG*VGQILV
Trigger: CACAAGGATTTGGCCAACTCACCCAGCTGGGCATGG...TGTGCACAGAGATCTCTGTAGAAGGAGTAGCTGCCCTTTCTCAGGGCAGATGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000475741.5
CDS-3UTR TCA 90 bp TTCCTCAAAGCTGGGGGTAATGGCCAAAGTATGTTCTCAAAGCATCATCTGCCCTCCGTGGACCAGTCTTaGGGGATCACAGGGCCAACC +
Preference number: 4 (lower is better)
Translates to: FLKAGGNGQSMFSKHHLPSVDQS*GITGPT
Trigger: GGTTGGCCCTGTGATCCCTCAAGACTGGTCCACGGA...GGGCAGATGATGCTTTGAGAACATACTTTGGCCATTACCCCCAGCTTTGAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000475741.5
CDS-3UTR TCA 90 bp GCCTGTCCTTTAGATGCGGCACCACTGAGAGATGCTGTGTCACAGGAGGTTGGCACTACCACTCCATTATaGGAAGACCTAGGTAGCCTG +
Preference number: 4 (lower is better)
Translates to: ACPLDAAPLRDAVSQEVGTTTPL*EDLGSL
Trigger: CAGGCTACCTAGGTCTTCTCATAATGGAGTGGTAGT...GCCAACCTCCTGTGACACAGCATCTCTCAGTGGTGCCGCATCTAAAGGACAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000351273.11
CDS-3UTR TCA 90 bp GGTCACTGTGAGTTCAGACCCTGCTCTGGGCAGATTCAAAAGGCAGGGTGTGAGAAATCCTTGTGGCCATaGGGATTCCTTTATGGGGTC +
Preference number: 4 (lower is better)
Translates to: GHCEFRPCSGQIQKAGCEKSLWP*GFLYGV
Trigger: GACCCCATAAAGGAATCCTCATGGCCACAAGGATTT...CTCACACCCTGCCTTTTGAATCTGCCCAGAGCAGGGTCTGAACTCACAGTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000351273.11
CDS-3UTR TCA 90 bp AGAGAAACTCCATCACGTGGTGCTCTCTTTCCTGATGTGTTGTGCCCAAATAGCCCATGCCCAGCTGGGTaGGTTGGCCAAATCCTTGTG +
Preference number: 4 (lower is better)
Translates to: RETPSRGALFPDVLCPNSPCPAG*VGQILV
Trigger: CACAAGGATTTGGCCAACTCACCCAGCTGGGCATGG...GCTATTTGGGCACAACACATCAGGAAAGAGAGCACCACGTGATGGAGTTTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR GCA 90 bp TCTCCGGACAACTGTGGCAGAGAATACAACCATCCTATGCATAACAGCCTCTTTGGCCAGGAGGAGGGGTaGAGCTCTCATGTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: SPDNCGREYNHPMHNSLFGQEEG*SSHVEE
Trigger: CTCCTCAACATGAGAGCTGCACCCCTCCTCCTGGCC...AAAGAGGCTGTTATGCATAGGATGGTTGTATTCTCTGCCACAGTTGTCCGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000351273.11
CDS-3UTR GCA 90 bp TCAATCGATGTCTTTGTCAGTCATTCTGTGACCAACCAGGAGCGGGGATGGCTTTGCACCGGGATGGGCTaGCAGAGTAGGATAGGATTC +
Preference number: 4 (lower is better)
Translates to: SIDVFVSHSVTNQERGWLCTGMG*QSRIGF
Trigger: GAATCCTATCCTACTCTGGCAGCCCATCCCGGTGCA...AAGCCATCCCCGCTCCTGGTTGGTCACAGAATGACTGACAAAGACATCGATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR GCA 90 bp ATCATCTGCCCTGAGAAAGGGCAGCTACTCCTTCTACAGAGATCTCTGTGCACATGCACCGGGATGGGCTaGCAGAGTAGGATAGGATTC +
Preference number: 4 (lower is better)
Translates to: IICPEKGQLLLLQRSLCTCTGMG*QSRIGF
Trigger: GAATCCTATCCTACTCTGGCAGCCCATCCCGGTGCA...TGTGCACAGAGATCTCTGTAGAAGGAGTAGCTGCCCTTTCTCAGGGCAGATGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000475741.5
CDS-3UTR GCA 90 bp CATCCTATGCATAACAGCCTCTTTCTAGCTGAACAAGCAGCCTGCACTACCACTGAAAGAGGAACTGTGTaGACCGGGATGGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: HPMHNSLFLAEQAACTTTERGTV*TGMGCQ
Trigger: CTGGCAGCCCATCCCGGTGCACACAGTTCCTCTTTC...AGTGGTAGTGCAGGCTGCTTGTTCAGCTAGAAAGAGGCTGTTATGCATAGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000351273.11
CDS-3UTR GCA 90 bp TCAAAGCTGGGGGTAATGGCCAAAGTATGTTCTCAAAGCATCATCTGCCCTGAGGAAAGAGGAACTGTGTaGACCGGGATGGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: SKLGVMAKVCSQSIICPEERGTV*TGMGCQ
Trigger: CTGGCAGCCCATCCCGGTGCACACAGTTCCTCTTTC...CTCAGGGCAGATGATGCTTTGAGAACATACTTTGGCCATTACCCCCAGCTTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000475741.5
CDS-3UTR GCA 90 bp TTCAGACCCTGCTCTGGGCAGATTCAAAAGGCAGGGTGTGAGGATGGCAATGCCTGTGAGTTCAGACCCTaGTCTGGGCAGATTCAAAAG +
Preference number: 4 (lower is better)
Translates to: FRPCSGQIQKAGCEDGNACEFRP*SGQIQK
Trigger: CTTTTGAATCTGCCCAGAGCAGGGTCTGAACTCACA...GGCATTGCCATCCTCACACCCTGCCTTTTGAATCTGCCCAGAGCAGGGTCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000351273.11
CDS-3UTR CCA 90 bp GTCAGTCATTCTGTGACCAACCAGGAGCGGGGATGGCTTTGCTCTAGATTCTGGCCTTTATGGGGTCAGTaGGAAAGGTGTCAATGGGAC +
Preference number: 4 (lower is better)
Translates to: VSHSVTNQERGWLCSRFWPLWGQ*ERCQWD
Trigger: GTCCCATTGACACCTTTCCCACTGACCCCATAAAGG...CCAGAATCTAGAGCAAAGCCATCCCCGCTCCTGGTTGGTCACAGAATGACTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR CCA 90 bp CTCAAAGCATCATCTGCCCTGAGAAAGGGCAGCTACTCCTTCTACAGAGATCTCCCCAGCTGGGTGAGTTaGCCAAATCCTTGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: LKASSALRKGSYSFYRDLPSWVS*PNPCGH
Trigger: ATGGCCACAAGGATTTGGCCAACTCACCCAGCTGGG...GAGATCTCTGTAGAAGGAGTAGCTGCCCTTTCTCAGGGCAGATGATGCTTTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000475741.5
CDS-3UTR CCA 90 bp AATCGATGTCTTTGTCAGTCATTCTGTGACCAACCAGGAGCGGGGATGGCTTTGTGCTCCATGCCCAGCTaGGTGAGTTGGCCAAATCCT +
Preference number: 4 (lower is better)
Translates to: NRCLCQSFCDQPGAGMALCSMPS*VSWPNP
Trigger: AGGATTTGGCCAACTCACCCAGCTGGGCATGGAGCA...CAAAGCCATCCCCGCTCCTGGTTGGTCACAGAATGACTGACAAAGACATCGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR TCA 90 bp AATCGATGTCTTTGTCAGTCATTCTGTGACCAACCAGGAGCGGGGATGGCTTTGTTGTCAGTCATTCTGTaGCCAACCAGGAGCGGGGAT +
Preference number: 4 (lower is better)
Translates to: NRCLCQSFCDQPGAGMALLSVIL*PTRSGD
Trigger: ATCCCCGCTCCTGGTTGGTCACAGAATGACTGACAA...CAAAGCCATCCCCGCTCCTGGTTGGTCACAGAATGACTGACAAAGACATCGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000507647.1
CDS-3UTR GCA 90 bp AGCATCATCTGCCCTGAGAAAGGGCAGCTACTCCTTCTACAGAGATCTCTGTGCGGACTTCGGTCTCCATaGCGAAACACCAAAGTCACA +
Preference number: 4 (lower is better)
Translates to: SIICPEKGQLLLLQRSLCGLRSP*RNTKVT
Trigger: TGTGACTTTGGTGTTTCGGCATGGAGACCGAAGTCC...GCACAGAGATCTCTGTAGAAGGAGTAGCTGCCCTTTCTCAGGGCAGATGATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000475741.5
CDS-3UTR GCA 90 bp GCCTGTCCTTTAGATGCGGCACCACTGAGAGATGCTGTGTCACAGGAGGTTGGCGCTTGGTATCTGAGTTaGTCTCTTCATGTGATTGAG +
Preference number: 4 (lower is better)
Translates to: ACPLDAAPLRDAVSQEVGAWYLS*SLHVIE
Trigger: CTCAATCACATGAAGAGAGCAACTCAGATACCAAGC...GCCAACCTCCTGTGACACAGCATCTCTCAGTGGTGCCGCATCTAAAGGACAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000351273.11
CDS-3UTR CCA 90 bp CTCAAAGCATCATCTGCCCTGAGAAAGGGCAGCTACTCCTTCTACAGAGATCTCTGGGAAAGGTGTCAATaGGACTTCGGTCTCCATGCC +
Preference number: 4 (lower is better)
Translates to: LKASSALRKGSYSFYRDLWERCQ*DFGLHA
Trigger: GGCATGGAGACCGAAGTCCCATTGACACCTTTCCCA...GAGATCTCTGTAGAAGGAGTAGCTGCCCTTTCTCAGGGCAGATGATGCTTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000475741.5
CDS-3UTR CCA 90 bp TTCCTCAAAGCTGGGGGTAATGGCCAAAGTATGTTCTCAAAGCATCATCTGCCCTGCTCCATGCCCAGCTaGGTGAGTTGGCCAAATCCT +
Preference number: 4 (lower is better)
Translates to: FLKAGGNGQSMFSKHHLPCSMPS*VSWPNP
Trigger: AGGATTTGGCCAACTCACCCAGCTGGGCATGGAGCA...GGGCAGATGATGCTTTGAGAACATACTTTGGCCATTACCCCCAGCTTTGAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000475741.5
CDS-3UTR CCA 90 bp GTCTTTGTCAGTCATTCTGTGACCAACCAGGAGCGGGGATGGCTTTGCTCTAGACTTGATGGCTGTTTGTaGTCATACACTCCGTGGACC +
Preference number: 4 (lower is better)
Translates to: VFVSHSVTNQERGWLCSRLDGCL*SYTPWT
Trigger: GGTCCACGGAGTGTATGACCACAAACAGCCATCAAG...TCTAGAGCAAAGCCATCCCCGCTCCTGGTTGGTCACAGAATGACTGACAAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000507647.1
CDS-3UTR CCA 90 bp AGCATCATCTGCCCTGAGAAAGGGCAGCTACTCCTTCTACAGAGATCTCTGTGCAAGTTTTATGGCAAGTaGGGGCAGGGTCAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: SIICPEKGQLLLLQRSLCKFYGK*GQGQVK
Trigger: CTTCACCTGACCCTGCCCCCACTTGCCATAAAACTT...GCACAGAGATCTCTGTAGAAGGAGTAGCTGCCCTTTCTCAGGGCAGATGATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR CCA 90 bp AATCGATGTCTTTGTCAGTCATTCTGTGACCAACCAGGAGCGGGGATGGCTTTGAACCAGGAGCGGGGATaGCTTTGCTCTAGATTCTGG +
Preference number: 4 (lower is better)
Translates to: NRCLCQSFCDQPGAGMALNQERG*LCSRFW
Trigger: CCAGAATCTAGAGCAAAGCCATCCCCGCTCCTGGTT...CAAAGCCATCCCCGCTCCTGGTTGGTCACAGAATGACTGACAAAGACATCGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000507647.1
CDS-3UTR TCA 90 bp GTCTTTGTCAGTCATTCTGTGACCAACCAGGAGCGGGGATGGCTTTGCTCTAGACCCAGGAGGGTAAAGTaGAATTGTGAACACTCTCAC +
Preference number: 4 (lower is better)
Translates to: VFVSHSVTNQERGWLCSRPRRVK*NCEHSH
Trigger: GTGAGAGTGTTCACAATTTCACTTTACCCTCCTGGG...TCTAGAGCAAAGCCATCCCCGCTCCTGGTTGGTCACAGAATGACTGACAAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR TCA 90 bp TTCCTCAAAGCTGGGGGTAATGGCCAAAGTATGTTCTCAAAGCATCATCTGCCCAAGCATCATCTGCCCTaGGAAAGGGCAGCTACTCCT +
Preference number: 4 (lower is better)
Translates to: FLKAGGNGQSMFSKHHLPKHHLP*ERAATP
Trigger: AGGAGTAGCTGCCCTTTCTCAGGGCAGATGATGCTT...GGGCAGATGATGCTTTGAGAACATACTTTGGCCATTACCCCCAGCTTTGAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000475741.5
CDS-3UTR GCA 90 bp CATCCTATGCATAACAGCCTCTTTCTAGCTGAACAAGCAGCCTGCACTACCACTTGGGGGAAACAGGGCTaGCAGGTTTGTCATAGCACT +
Preference number: 4 (lower is better)
Translates to: HPMHNSLFLAEQAACTTTWGKQG*QVCHST
Trigger: AGTGCTATGACAAACCTGGCAGCCCTGTTTCCCCCA...AGTGGTAGTGCAGGCTGCTTGTTCAGCTAGAAAGAGGCTGTTATGCATAGGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000351273.11
CDS-3UTR CCA 90 bp GGTCACTGTGAGTTCAGACCCTGCTCTGGGCAGATTCAAAAGGCAGGGTGTGAGCAAACTTCAACTCCTTaGCTAGTACACTTCGGTCTA +
Preference number: 4 (lower is better)
Translates to: GHCEFRPCSGQIQKAGCEQTSTP*LVHFGL
Trigger: TAGACCGAAGTGTACTAGCCAAGGAGTTGAAGTTTG...CTCACACCCTGCCTTTTGAATCTGCCCAGAGCAGGGTCTGAACTCACAGTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000351273.11
CDS-3UTR CCA 90 bp TCTCCGGACAACTGTGGCAGAGAATACAACCATCCTATGCATAACAGCCTCTTTCCCAGCTGGGTGAGTTaGCCAAATCCTTGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: SPDNCGREYNHPMHNSLFPSWVS*PNPCGH
Trigger: ATGGCCACAAGGATTTGGCCAACTCACCCAGCTGGG...AAAGAGGCTGTTATGCATAGGATGGTTGTATTCTCTGCCACAGTTGTCCGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000351273.11
CDS-3UTR CCA 90 bp CCATTTTCCTCAAAGCTGGGGGTAATGGCCAAAGTATGTTCTCAAAGCATCATCGATGCTGACACCTTCTaGGGGAAACAGGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: PFSSKLGVMAKVCSQSIIDADTF*GKQGCQ
Trigger: CTGGCAGCCCTGTTTCCCCCAGAAGGTGTCAGCATC...GATGATGCTTTGAGAACATACTTTGGCCATTACCCCCAGCTTTGAGGAAAATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000475741.5
CDS-3UTR CCA 90 bp ATCATCTGCCCTGAGAAAGGGCAGCTACTCCTTCTACAGAGATCTCTGTGCACATGGTCATACACTCCGTaGACCAGTCTTGAGGGATCA +
Preference number: 4 (lower is better)
Translates to: IICPEKGQLLLLQRSLCTWSYTP*TSLEGS
Trigger: TGATCCCTCAAGACTGGTCCACGGAGTGTATGACCA...TGTGCACAGAGATCTCTGTAGAAGGAGTAGCTGCCCTTTCTCAGGGCAGATGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000475741.5
CDS-3UTR CCA 90 bp CTCAAAGCATCATCTGCCCTGAGAAAGGGCAGCTACTCCTTCTACAGAGATCTCTGGTCATACACTCCGTaGACCAGTCTTGAGGGATCA +
Preference number: 4 (lower is better)
Translates to: LKASSALRKGSYSFYRDLWSYTP*TSLEGS
Trigger: TGATCCCTCAAGACTGGTCCACGGAGTGTATGACCA...GAGATCTCTGTAGAAGGAGTAGCTGCCCTTTCTCAGGGCAGATGATGCTTTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000475741.5
CDS-3UTR GCA 90 bp CATCCTATGCATAACAGCCTCTTTCTAGCTGAACAAGCAGCCTGCACTACCACTGGACTTCGGTCTCCATaGCGAAACACCAAAGTCACA +
Preference number: 4 (lower is better)
Translates to: HPMHNSLFLAEQAACTTTGLRSP*RNTKVT
Trigger: TGTGACTTTGGTGTTTCGGCATGGAGACCGAAGTCC...AGTGGTAGTGCAGGCTGCTTGTTCAGCTAGAAAGAGGCTGTTATGCATAGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000351273.11
CDS-3UTR GCA 90 bp CGATGTCTTTGTCAGTCATTCTGTGACCAACCAGGAGCGGGGATGGCTTTGCTCTCCGGTCAACGTCTGTaGTTCGAATATAAACCTGTT +
Preference number: 4 (lower is better)
Translates to: RCLCQSFCDQPGAGMALLSGQRL*FEYKPV
Trigger: AACAGGTTTATATTCGAAGCACAGACGTTGACCGGA...GAGCAAAGCCATCCCCGCTCCTGGTTGGTCACAGAATGACTGACAAAGACATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR GCA 90 bp AAGCTGGGGGTAATGGCCAAAGTATGTTCTCAAAGCATCATCTGCCCTGAGAAATGGGGGAAACAGGGCTaGCAGGTTTGTCATAGCACT +
Preference number: 4 (lower is better)
Translates to: KLGVMAKVCSQSIICPEKWGKQG*QVCHST
Trigger: AGTGCTATGACAAACCTGGCAGCCCTGTTTCCCCCA...TTTCTCAGGGCAGATGATGCTTTGAGAACATACTTTGGCCATTACCCCCAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000475741.5
CDS-3UTR GCA 90 bp GTCAGTCATTCTGTGACCAACCAGGAGCGGGGATGGCTTTGCTCTAGATTCTGGGCTTGGTATCTGAGTTaGTCTCTTCATGTGATTGAG +
Preference number: 4 (lower is better)
Translates to: VSHSVTNQERGWLCSRFWAWYLS*SLHVIE
Trigger: CTCAATCACATGAAGAGAGCAACTCAGATACCAAGC...CCAGAATCTAGAGCAAAGCCATCCCCGCTCCTGGTTGGTCACAGAATGACTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR GCA 90 bp CGATGTCTTTGTCAGTCATTCTGTGACCAACCAGGAGCGGGGATGGCTTTGCTCCTCACAGTAGTGTCATaGGCAGAATACATGATGAGT +
Preference number: 4 (lower is better)
Translates to: RCLCQSFCDQPGAGMALLLTVVS*AEYMMS
Trigger: ACTCATCATGTATTCTGCGCATGACACTACTGTGAG...GAGCAAAGCCATCCCCGCTCCTGGTTGGTCACAGAATGACTGACAAAGACATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR GCA 90 bp GTCTTTGTCAGTCATTCTGTGACCAACCAGGAGCGGGGATGGCTTTGCTCTAGACTCGGACTCCCAAAATaGTGGGATTATAGGCGTAAA +
Preference number: 4 (lower is better)
Translates to: VFVSHSVTNQERGWLCSRLGLPK*WDYRRK
Trigger: TTTACGCCTATAATCCCAGCATTTTGGGAGTCCGAG...TCTAGAGCAAAGCCATCCCCGCTCCTGGTTGGTCACAGAATGACTGACAAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR GCA 90 bp ATCGATGTCTTTGTCAGTCATTCTGTGACCAACCAGGAGCGGGGATGGCTTTGCCTCAGCCTTCCAAAATaGAAGGATTACAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: IDVFVSHSVTNQERGWLCLSLPK*KDYRCE
Trigger: CTCACACCTGTAATCCTTGCATTTTGGAAGGCTGAG...GCAAAGCCATCCCCGCTCCTGGTTGGTCACAGAATGACTGACAAAGACATCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR CCA 90 bp CTTATTTCTCTCCGGACAACTGTGGCAGAGAATACAACCATCCTATGCATAACAGATGCTGACACCTTCTaGGGGAAACAGGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: LISLRTTVAENTTILCITDADTF*GKQGCQ
Trigger: CTGGCAGCCCTGTTTCCCCCAGAAGGTGTCAGCATC...TGTTATGCATAGGATGGTTGTATTCTCTGCCACAGTTGTCCGGAGAGAAATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000351273.11
CDS-3UTR CCA 90 bp AGCATCATCTGCCCTGAGAAAGGGCAGCTACTCCTTCTACAGAGATCTCTGTGCGGGTGCAGCCTCTTCTaGAATTCCTCTGATTTCAAA +
Preference number: 4 (lower is better)
Translates to: SIICPEKGQLLLLQRSLCGCSLF*NSSDFK
Trigger: TTTGAAATCAGAGGAATTCCAGAAGAGGCTGCACCC...GCACAGAGATCTCTGTAGAAGGAGTAGCTGCCCTTTCTCAGGGCAGATGATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR CCA 90 bp TTCCTCAAAGCTGGGGGTAATGGCCAAAGTATGTTCTCAAAGCATCATCTGCCCCTTGATGGCTGTTTGTaGTCATACACTCCGTGGACC +
Preference number: 4 (lower is better)
Translates to: FLKAGGNGQSMFSKHHLPLDGCL*SYTPWT
Trigger: GGTCCACGGAGTGTATGACCACAAACAGCCATCAAG...GGGCAGATGATGCTTTGAGAACATACTTTGGCCATTACCCCCAGCTTTGAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000475741.5
CDS-3UTR TCA 90 bp CCCATTTTCCTCAAAGCTGGGGGTAATGGCCAAAGTATGTTCTCAAAGCATCATGTGCAGCTCTCATGTTaGGGAGAGCTGTTTCTGGCA +
Preference number: 4 (lower is better)
Translates to: PIFLKAGGNGQSMFSKHHVQLSC*GELFLA
Trigger: TGCCAGAAACAGCTCTCCTCAACATGAGAGCTGCAC...ATGATGCTTTGAGAACATACTTTGGCCATTACCCCCAGCTTTGAGGAAAATGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000475741.5
CDS-3UTR TCA 90 bp AAGCTGGGGGTAATGGCCAAAGTATGTTCTCAAAGCATCATCTGCCCTGAGAAAAACGAGGGCAGTTCCTaGAAGGCAGGTATAGCAACT +
Preference number: 4 (lower is better)
Translates to: KLGVMAKVCSQSIICPEKNEGSS*KAGIAT
Trigger: AGTTGCTATACCTGCCTTTCAGGAACTGCCCTCGTT...TTTCTCAGGGCAGATGATGCTTTGAGAACATACTTTGGCCATTACCCCCAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR TCA 90 bp TCAAAGCTGGGGGTAATGGCCAAAGTATGTTCTCAAAGCATCATCTGCCCTGAGCCCAGGAGGGTAAAGTaGAATTGTGAACACTCTCAC +
Preference number: 4 (lower is better)
Translates to: SKLGVMAKVCSQSIICPEPRRVK*NCEHSH
Trigger: GTGAGAGTGTTCACAATTTCACTTTACCCTCCTGGG...CTCAGGGCAGATGATGCTTTGAGAACATACTTTGGCCATTACCCCCAGCTTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000475741.5
CDS-3UTR TCA 90 bp AATCGATGTCTTTGTCAGTCATTCTGTGACCAACCAGGAGCGGGGATGGCTTTGCTGTCTTCAGTACCTTaGTGGCTGTTTGTGGTCATA +
Preference number: 4 (lower is better)
Translates to: NRCLCQSFCDQPGAGMALLSSVP*WLFVVI
Trigger: TATGACCACAAACAGCCATCAAGGTACTGAAGACAG...CAAAGCCATCCCCGCTCCTGGTTGGTCACAGAATGACTGACAAAGACATCGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR TCA 90 bp CTCAAAGCATCATCTGCCCTGAGAAAGGGCAGCTACTCCTTCTACAGAGATCTCCTGTCTTCAGTACCTTaGTGGCTGTTTGTGGTCATA +
Preference number: 4 (lower is better)
Translates to: LKASSALRKGSYSFYRDLLSSVP*WLFVVI
Trigger: TATGACCACAAACAGCCATCAAGGTACTGAAGACAG...GAGATCTCTGTAGAAGGAGTAGCTGCCCTTTCTCAGGGCAGATGATGCTTTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000475741.5
CDS-3UTR GCA 90 bp ACTTGGGAGGGAAATAACACAAAGAAGCATATCAATCGATGTCTTTGTCAGTCAGGCCAGGAGGAGGGGTaGAGCTCTCATGTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: TWEGNNTKKHINRCLCQSGQEEG*SSHVEE
Trigger: CTCCTCAACATGAGAGCTGCACCCCTCCTCCTGGCC...TGACTGACAAAGACATCGATTGATATGCTTCTTTGTGTTATTTCCCTCCCAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR CCA 90 bp AGCATCATCTGCCCTGAGAAAGGGCAGCTACTCCTTCTACAGAGATCTCTGTGCCAAACTTCAACTCCTTaGCTAGTACACTTCGGTCTA +
Preference number: 4 (lower is better)
Translates to: SIICPEKGQLLLLQRSLCQTSTP*LVHFGL
Trigger: TAGACCGAAGTGTACTAGCCAAGGAGTTGAAGTTTG...GCACAGAGATCTCTGTAGAAGGAGTAGCTGCCCTTTCTCAGGGCAGATGATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000475741.5
CDS-3UTR CCA 90 bp TCTCCGGACAACTGTGGCAGAGAATACAACCATCCTATGCATAACAGCCTCTTTCCTTTATGGGGTCAGTaGGAAAGGTGTCAATGGGAC +
Preference number: 4 (lower is better)
Translates to: SPDNCGREYNHPMHNSLFPLWGQ*ERCQWD
Trigger: GTCCCATTGACACCTTTCCCACTGACCCCATAAAGG...AAAGAGGCTGTTATGCATAGGATGGTTGTATTCTCTGCCACAGTTGTCCGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000351273.11
CDS-3UTR CCA 90 bp GAGTCAACATCTCTTATCACTGGAGCTTCTAGAGAAACTCCATCACGTGGTGCTACCAGGACACCCCCTTaGAGCCTAGATTTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: ESTSLITGASRETPSRGATRTPP*SLDFSF
Trigger: GAAAGAGAAATCTAGGCTCCAAGGGGGTGTCCTGGT...AGCACCACGTGATGGAGTTTCTCTAGAAGCTCCAGTGATAAGAGATGTTGACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR CCA 90 bp GGATGGCTTTGCTCTAGATTCTGGCAGCCAGTAGAAACCATCTCTAGAAACCATTGGTCATACACTCCGTaGACCAGTCTTGAGGGATCA +
Preference number: 4 (lower is better)
Translates to: GWLCSRFWQPVETISRNHWSYTP*TSLEGS
Trigger: TGATCCCTCAAGACTGGTCCACGGAGTGTATGACCA...ATGGTTTCTAGAGATGGTTTCTACTGGCTGCCAGAATCTAGAGCAAAGCCATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000507647.1
CDS-3UTR CCA 90 bp AGCATATCAATCGATGTCTTTGTCAGTCATTCTGTGACCAACCAGGAGCGGGGATTTCTTCTTGCAGAGTaGGCAGTTTCAGCAGGACCT +
Preference number: 4 (lower is better)
Translates to: SISIDVFVSHSVTNQERGFLLAE*AVSAGP
Trigger: AGGTCCTGCTGAAACTGCCCACTCTGCAAGAAGAAA...TCCCCGCTCCTGGTTGGTCACAGAATGACTGACAAAGACATCGATTGATATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000507647.1
CDS-3UTR CCA 90 bp AGAGAATACAACCATCCTATGCATAACAGCCTCTTTCTAGCTGAACAAGCAGCCCACAGGAGGTTGGCCTaGCTTATCCAGCTGTCTGTT +
Preference number: 4 (lower is better)
Translates to: REYNHPMHNSLFLAEQAAHRRLA*LIQLSV
Trigger: AACAGACAGCTGGATAAGCCAGGCCAACCTCCTGTG...GGCTGCTTGTTCAGCTAGAAAGAGGCTGTTATGCATAGGATGGTTGTATTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000351273.11
CDS-3UTR CCA 90 bp AGAGAATACAACCATCCTATGCATAACAGCCTCTTTCTAGCTGAACAAGCAGCCGTTCAGACCCTGCTCTaGGCAGATTCAAAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: REYNHPMHNSLFLAEQAAVQTLL*ADSKGR
Trigger: CCTGCCTTTTGAATCTGCCCAGAGCAGGGTCTGAAC...GGCTGCTTGTTCAGCTAGAAAGAGGCTGTTATGCATAGGATGGTTGTATTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000351273.11
CDS-3UTR TCA 90 bp GGGTCTTCTTTCGTAAGAATCACCCTGTATAATAATACTTCTAGTCTAACTTCCTGCAGCCAGGTAGCATaGGGGGATACGGCTCGTGCT +
Preference number: 4 (lower is better)
Translates to: GSSFVRITLYNNTSSLTSCSQVA*GDTARA
Trigger: AGCACGAGCCGTATCCCCTCATGCTACCTGGCTGCA...GGAAGTTAGACTAGAAGTATTATTATACAGGGTGATTCTTACGAAAGAAGACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000351273.11
CDS-3UTR TCA 90 bp ATCATCTGCCCTGAGAAAGGGCAGCTACTCCTTCTACAGAGATCTCTGTGCACAGGCAAAGCTATATCATaGTTTCTTCTTGCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: IICPEKGQLLLLQRSLCTGKAIS*FLLAEW
Trigger: CCACTCTGCAAGAAGAAATCATGATATAGCTTTGCC...TGTGCACAGAGATCTCTGTAGAAGGAGTAGCTGCCCTTTCTCAGGGCAGATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR TCA 90 bp GCAGTTTCAGCAGGACCTGTAAGTTTGCTTAGGTTTTCTGAAGATATCGGCATTTTGTCAGTCATTCTGTaGCCAACCAGGAGCGGGGAT +
Preference number: 4 (lower is better)
Translates to: AVSAGPVSLLRFSEDIGILSVIL*PTRSGD
Trigger: ATCCCCGCTCCTGGTTGGTCACAGAATGACTGACAA...AATGCCGATATCTTCAGAAAACCTAAGCAAACTTACAGGTCCTGCTGAAACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR GCA 90 bp GTTCCATTTCAGACATTTAAAGAACAGCCTTATCTAATCCTGCTCAAGCAAAATAAGGCTAAGGCTTGCTaGCCTGGCCAGGAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: VPFQTFKEQPYLILLKQNKAKAC*PGQEEG
Trigger: CCCCTCCTCCTGGCCAGGGCAGCAAGCCTTAGCCTT...ATTTTGCTTGAGCAGGATTAGATAAGGCTGTTCTTTAAATGTCTGAAATGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR GCA 90 bp TCTAGTCTAACTTCCCCCAATATCCAGTATTTTTCTAATCTATGTCTTTGTCCAAAGGCTAAGGCTTGCTaGCCTGGCCAGGAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: SSLTSPNIQYFSNLCLCPKAKAC*PGQEEG
Trigger: CCCCTCCTCCTGGCCAGGGCAGCAAGCCTTAGCCTT...TGGACAAAGACATAGATTAGAAAAATACTGGATATTGGGGGAAGTTAGACTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000351273.11
CDS-3UTR GCA 90 bp CTCAAAGCATCATCTGCCCTGAGAAAGGGCAGCTACTCCTTCTACAGAGATCTCCTCACAGTAGTGTCATaGGCAGAATACATGATGAGT +
Preference number: 4 (lower is better)
Translates to: LKASSALRKGSYSFYRDLLTVVS*AEYMMS
Trigger: ACTCATCATGTATTCTGCGCATGACACTACTGTGAG...GAGATCTCTGTAGAAGGAGTAGCTGCCCTTTCTCAGGGCAGATGATGCTTTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000475741.5
CDS-3UTR GCA 90 bp CTCAAAGCATCATCTGCCCTGAGAAAGGGCAGCTACTCCTTCTACAGAGATCTCCTACAGAGATCTCTGTaGACACTAATCTGTACTGTC +
Preference number: 4 (lower is better)
Translates to: LKASSALRKGSYSFYRDLLQRSL*TLICTV
Trigger: GACAGTACAGATTAGTGTGCACAGAGATCTCTGTAG...GAGATCTCTGTAGAAGGAGTAGCTGCCCTTTCTCAGGGCAGATGATGCTTTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000475741.5
CDS-3UTR GCA 90 bp CTCAAAGCATCATCTGCCCTGAGAAAGGGCAGCTACTCCTTCTACAGAGATCTCATATTTTGGCACTGCTaGCCCTTTACATTAACGCTG +
Preference number: 4 (lower is better)
Translates to: LKASSALRKGSYSFYRDLIFWHC*PFTLTL
Trigger: CAGCGTTAATGTAAAGGGGCAGCAGTGCCAAAATAT...GAGATCTCTGTAGAAGGAGTAGCTGCCCTTTCTCAGGGCAGATGATGCTTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR GCA 90 bp AGAGAAACTCCATCACGTGGTGCTCTCTTTCCTGATGTGTTGTGCCCAAATAGCAGGCGTAAACCACCATaGCTGGCCTTAAATCAACTT +
Preference number: 4 (lower is better)
Translates to: RETPSRGALFPDVLCPNSRRKPP*LALNQL
Trigger: AAGTTGATTTAAGGCCAGGCATGGTGGTTTACGCCT...GCTATTTGGGCACAACACATCAGGAAAGAGAGCACCACGTGATGGAGTTTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR GCA 90 bp AATCGATGTCTTTGTCAGTCATTCTGTGACCAACCAGGAGCGGGGATGGCTTTGATCATGATTTCTTCTTaGAGAGTGGGCAGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: NRCLCQSFCDQPGAGMALIMISS*RVGSFS
Trigger: GCTGAAACTGCCCACTCTGCAAGAAGAAATCATGAT...CAAAGCCATCCCCGCTCCTGGTTGGTCACAGAATGACTGACAAAGACATCGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000507647.1
CDS-3UTR CCA 90 bp CCCATTTTCCTCAAAGCTGGGGGTAATGGCCAAAGTATGTTCTCAAAGCATCATCCTTTATGGGGTCAGTaGGAAAGGTGTCAATGGGAC +
Preference number: 4 (lower is better)
Translates to: PIFLKAGGNGQSMFSKHHPLWGQ*ERCQWD
Trigger: GTCCCATTGACACCTTTCCCACTGACCCCATAAAGG...ATGATGCTTTGAGAACATACTTTGGCCATTACCCCCAGCTTTGAGGAAAATGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000475741.5
CDS-3UTR CCA 90 bp CCATTTTCCTCAAAGCTGGGGGTAATGGCCAAAGTATGTTCTCAAAGCATCATCACCAGGACACCCCCTTaGAGCCTAGATTTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: PFSSKLGVMAKVCSQSIITRTPP*SLDFSF
Trigger: GAAAGAGAAATCTAGGCTCCAAGGGGGTGTCCTGGT...GATGATGCTTTGAGAACATACTTTGGCCATTACCCCCAGCTTTGAGGAAAATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000475741.5
CDS-3UTR CCA 90 bp GTTTGGCTTCTTATTTCTCTCCGGACAACTGTGGCAGAGAATACAACCATCCTATGGTCATACACTCCGTaGACCAGTCTTGAGGGATCA +
Preference number: 4 (lower is better)
Translates to: VWLLISLRTTVAENTTILWSYTP*TSLEGS
Trigger: TGATCCCTCAAGACTGGTCCACGGAGTGTATGACCA...TAGGATGGTTGTATTCTCTGCCACAGTTGTCCGGAGAGAAATAAGAAGCCAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000351273.11
CDS-3UTR CCA 90 bp TATTTCTCTCCGGACAACTGTGGCAGAGAATACAACCATCCTATGCATAACAGCCTTGATGGCTGTTTGTaGTCATACACTCCGTGGACC +
Preference number: 4 (lower is better)
Translates to: YFSPDNCGREYNHPMHNSLDGCL*SYTPWT
Trigger: GGTCCACGGAGTGTATGACCACAAACAGCCATCAAG...GCTGTTATGCATAGGATGGTTGTATTCTCTGCCACAGTTGTCCGGAGAGAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000351273.11
CDS-3UTR TCA 90 bp ACATTTACTTGGGAGGGAAATAACACAAAGAAGCATATCAATCGATGTCTTTGTTGCAGCCAGGTAGCATaGGGGGATACGGCTCGTGCT +
Preference number: 4 (lower is better)
Translates to: TFTWEGNNTKKHINRCLCCSQVA*GDTARA
Trigger: AGCACGAGCCGTATCCCCTCATGCTACCTGGCTGCA...ACAAAGACATCGATTGATATGCTTCTTTGTGTTATTTCCCTCCCAAGTAAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000507647.1
CDS-3UTR TCA 90 bp AAGCATATCAATCGATGTCTTTGTCAGTCATTCTGTGACCAACCAGGAGCGGGGGGCAAAGCTATATCATaGTTTCTTCTTGCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: KHINRCLCQSFCDQPGAGGKAIS*FLLAEW
Trigger: CCACTCTGCAAGAAGAAATCATGATATAGCTTTGCC...CCCCGCTCCTGGTTGGTCACAGAATGACTGACAAAGACATCGATTGATATGCTT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000507647.1
CDS-3UTR GCA 90 bp GCAGTTTCAGCAGGACCTGTAAGTTTGCTTAGGTTTTCTGAAGATATCGGCATTGGACTTCGGTCTCCATaGCGAAACACCAAAGTCACA +
Preference number: 4 (lower is better)
Translates to: AVSAGPVSLLRFSEDIGIGLRSP*RNTKVT
Trigger: TGTGACTTTGGTGTTTCGGCATGGAGACCGAAGTCC...AATGCCGATATCTTCAGAAAACCTAAGCAAACTTACAGGTCCTGCTGAAACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR GCA 90 bp TTCCTCAAAGCTGGGGGTAATGGCCAAAGTATGTTCTCAAAGCATCATCTGCCCTCCGGTCAACGTCTGTaGTTCGAATATAAACCTGTT +
Preference number: 4 (lower is better)
Translates to: FLKAGGNGQSMFSKHHLPSGQRL*FEYKPV
Trigger: AACAGGTTTATATTCGAAGCACAGACGTTGACCGGA...GGGCAGATGATGCTTTGAGAACATACTTTGGCCATTACCCCCAGCTTTGAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000475741.5
CDS-3UTR GCA 90 bp TCAAAGCTGGGGGTAATGGCCAAAGTATGTTCTCAAAGCATCATCTGCCCTGAGGCTTGGTATCTGAGTTaGTCTCTTCATGTGATTGAG +
Preference number: 4 (lower is better)
Translates to: SKLGVMAKVCSQSIICPEAWYLS*SLHVIE
Trigger: CTCAATCACATGAAGAGAGCAACTCAGATACCAAGC...CTCAGGGCAGATGATGCTTTGAGAACATACTTTGGCCATTACCCCCAGCTTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000475741.5
CDS-3UTR GCA 90 bp AAGCATATCAATCGATGTCTTTGTCAGTCATTCTGTGACCAACCAGGAGCGGGGCTACAGAGATCTCTGTaGACACTAATCTGTACTGTC +
Preference number: 4 (lower is better)
Translates to: KHINRCLCQSFCDQPGAGLQRSL*TLICTV
Trigger: GACAGTACAGATTAGTGTGCACAGAGATCTCTGTAG...CCCCGCTCCTGGTTGGTCACAGAATGACTGACAAAGACATCGATTGATATGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR CCA 90 bp AGGCTGATTGGAGTTTGGCTTCTTATTTCTCTCCGGACAACTGTGGCAGAGAATGGGTGCAGCCTCTTCTaGAATTCCTCTGATTTCAAA +
Preference number: 4 (lower is better)
Translates to: RLIGVWLLISLRTTVAENGCSLF*NSSDFK
Trigger: TTTGAAATCAGAGGAATTCCAGAAGAGGCTGCACCC...ATTCTCTGCCACAGTTGTCCGGAGAGAAATAAGAAGCCAAACTCCAATCAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000351273.11
CDS-3UTR CCA 90 bp GCAGTTTCAGCAGGACCTGTAAGTTTGCTTAGGTTTTCTGAAGATATCGGCATTCTTGATGGCTGTTTGTaGTCATACACTCCGTGGACC +
Preference number: 4 (lower is better)
Translates to: AVSAGPVSLLRFSEDIGILDGCL*SYTPWT
Trigger: GGTCCACGGAGTGTATGACCACAAACAGCCATCAAG...AATGCCGATATCTTCAGAAAACCTAAGCAAACTTACAGGTCCTGCTGAAACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR CCA 90 bp TGGGAGGGAAATAACACAAAGAAGCATATCAATCGATGTCTTTGTCAGTCATTCCTCGCTCTCTTGCCCTaGCTGGAGTACAGTAGTGCA +
Preference number: 4 (lower is better)
Translates to: WEGNNTKKHINRCLCQSFLALLP*LEYSSA
Trigger: TGCACTACTGTACTCCAGCCAGGGCAAGAGAGCGAG...GAATGACTGACAAAGACATCGATTGATATGCTTCTTTGTGTTATTTCCCTCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR CCA 90 bp GAGCGGGGATGGCTTTGCTCTAGATTCTGGCAGCCAGTAGAAACCATCTCTAGATGTAGATCTGCCACATaGCAAAGCTATATCATGATT +
Preference number: 4 (lower is better)
Translates to: ERGWLCSRFWQPVETISRCRSAT*QSYIMI
Trigger: AATCATGATATAGCTTTGCCATGTGGCAGATCTACA...TCTAGAGATGGTTTCTACTGGCTGCCAGAATCTAGAGCAAAGCCATCCCCGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000507647.1
CDS-3UTR CCA 90 bp GGATGGCTTTGCTCTAGATTCTGGCAGCCAGTAGAAACCATCTCTAGAAACCATCTTTGCTCTAGATTCTaGCAGCCAGTAGAAACCATC +
Preference number: 4 (lower is better)
Translates to: GWLCSRFWQPVETISRNHLCSRF*QPVETI
Trigger: GATGGTTTCTACTGGCTGCCAGAATCTAGAGCAAAG...ATGGTTTCTAGAGATGGTTTCTACTGGCTGCCAGAATCTAGAGCAAAGCCATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000507647.1
CDS-3UTR TCA 90 bp TGGGAGGGAAATAACACAAAGAAGCATATCAATCGATGTCTTTGTCAGTCATTCGTGCAGCTCTCATGTTaGGGAGAGCTGTTTCTGGCA +
Preference number: 4 (lower is better)
Translates to: WEGNNTKKHINRCLCQSFVQLSC*GELFLA
Trigger: TGCCAGAAACAGCTCTCCTCAACATGAGAGCTGCAC...GAATGACTGACAAAGACATCGATTGATATGCTTCTTTGTGTTATTTCCCTCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR TCA 90 bp TCTAGTCTAACTTCCCCCAATATCCAGTATTTTTCTAATCTATGTCTTTGTCCACCATGCCCAGCTGGGTaGGTTGGCCAAATCCTTGTG +
Preference number: 4 (lower is better)
Translates to: SSLTSPNIQYFSNLCLCPPCPAG*VGQILV
Trigger: CACAAGGATTTGGCCAACTCACCCAGCTGGGCATGG...TGGACAAAGACATAGATTAGAAAAATACTGGATATTGGGGGAAGTTAGACTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000351273.11
CDS-3UTR TCA 90 bp ACTTGGGAGGGAAATAACACAAAGAAGCATATCAATCGATGTCTTTGTCAGTCAAAGCATCATCTGCCCTaGGAAAGGGCAGCTACTCCT +
Preference number: 4 (lower is better)
Translates to: TWEGNNTKKHINRCLCQSKHHLP*ERAATP
Trigger: AGGAGTAGCTGCCCTTTCTCAGGGCAGATGATGCTT...TGACTGACAAAGACATCGATTGATATGCTTCTTTGTGTTATTTCCCTCCCAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR TCA 90 bp GGAAATAACACAAAGAAGCATATCAATCGATGTCTTTGTCAGTCATTCTGTGACACACCAGGCCTAAAGTaGTCCTCCTGCCTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: GNNTKKHINRCLCQSFCDTPGLK*SSCLSL
Trigger: AAGGCTGAGGCAGGAGGATCACTTTAGGCCTGGTGT...GTCACAGAATGACTGACAAAGACATCGATTGATATGCTTCTTTGTGTTATTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR GCA 90 bp GGGAGGGAAATAACACAAAGAAGCATATCAATCGATGTCTTTGTCAGTCATTCTTGGGGGAAACAGGGCTaGCAGGTTTGTCATAGCACT +
Preference number: 4 (lower is better)
Translates to: GREITQRSISIDVFVSHSWGKQG*QVCHST
Trigger: AGTGCTATGACAAACCTGGCAGCCCTGTTTCCCCCA...AGAATGACTGACAAAGACATCGATTGATATGCTTCTTTGTGTTATTTCCCTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR GCA 90 bp GGGTCTTCTTTCGTAAGAATCACCCTGTATAATAATACTTCTAGTCTAACTTCCTGCACCGGGATGGGCTaGCAGAGTAGGATAGGATTC +
Preference number: 4 (lower is better)
Translates to: GSSFVRITLYNNTSSLTSCTGMG*QSRIGF
Trigger: GAATCCTATCCTACTCTGGCAGCCCATCCCGGTGCA...GGAAGTTAGACTAGAAGTATTATTATACAGGGTGATTCTTACGAAAGAAGACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000351273.11
CDS-3UTR GCA 90 bp TTTGTCAGTCATTCTGTGACCAACCAGGAGCGGGGATGGCTTTGCTCTAGATTCATTATATTTTGGCACTaGTGCCCCTTTACATTAACG +
Preference number: 4 (lower is better)
Translates to: FVSHSVTNQERGWLCSRFIIFWH*CPFTLT
Trigger: CGTTAATGTAAAGGGGCAGCAGTGCCAAAATATAAT...GAATCTAGAGCAAAGCCATCCCCGCTCCTGGTTGGTCACAGAATGACTGACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR GCA 90 bp AAGCTGGGGGTAATGGCCAAAGTATGTTCTCAAAGCATCATCTGCCCTGAGAAAATCATGATTTCTTCTTaGAGAGTGGGCAGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: KLGVMAKVCSQSIICPEKIMISS*RVGSFS
Trigger: GCTGAAACTGCCCACTCTGCAAGAAGAAATCATGAT...TTTCTCAGGGCAGATGATGCTTTGAGAACATACTTTGGCCATTACCCCCAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR CCA 90 bp GAGTCAACATCTCTTATCACTGGAGCTTCTAGAGAAACTCCATCACGTGGTGCTCAAACTTCAACTCCTTaGCTAGTACACTTCGGTCTA +
Preference number: 4 (lower is better)
Translates to: ESTSLITGASRETPSRGAQTSTP*LVHFGL
Trigger: TAGACCGAAGTGTACTAGCCAAGGAGTTGAAGTTTG...AGCACCACGTGATGGAGTTTCTCTAGAAGCTCCAGTGATAAGAGATGTTGACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR CCA 90 bp AAGCATATCAATCGATGTCTTTGTCAGTCATTCTGTGACCAACCAGGAGCGGGGTCTCTGATTATATTTTaGCACTGCTGCCCCTTTACA +
Preference number: 4 (lower is better)
Translates to: KHINRCLCQSFCDQPGAGSLIIF*HCCPFT
Trigger: TGTAAAGGGGCAGCAGTGCCAAAATATAATCAGAGA...CCCCGCTCCTGGTTGGTCACAGAATGACTGACAAAGACATCGATTGATATGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR CCA 90 bp AGCATATCAATCGATGTCTTTGTCAGTCATTCTGTGACCAACCAGGAGCGGGGAGTAGCAGTTTTCCAGTaGAGAAAACTTTCCAGATGT +
Preference number: 4 (lower is better)
Translates to: SISIDVFVSHSVTNQERGVAVFQ*RKLSRC
Trigger: ACATCTGGAAAGTTTTCTCCACTGGAAAACTGCTAC...TCCCCGCTCCTGGTTGGTCACAGAATGACTGACAAAGACATCGATTGATATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000336375.10
3UTR CAA 72 bp CTTGCAGAGTGGGCAGTTTCAGCAGGACCTGTAAGTTaGCTTAGGTTTTCTGAAGATATCGGCATTAAAGAC +
Preference number: 4 (lower is better)
Translates to: LAEWAVSAGPVS*LRFSEDIGIKD
Trigger: GTCTTTAATGCCGATATCTTCAGAAAACCTAAGCAAACTTACAGGTCCTGCTGAAACTGCCCACTCTGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR TCA 90 bp GGGTCTTCTTTCGTAAGAATCACCCTGTATAATAATACTTCTAGTCTAACTTCCGTGCAGCTCTCATGTTaGGGAGAGCTGTTTCTGGCA +
Preference number: 4 (lower is better)
Translates to: GSSFVRITLYNNTSSLTSVQLSC*GELFLA
Trigger: TGCCAGAAACAGCTCTCCTCAACATGAGAGCTGCAC...GGAAGTTAGACTAGAAGTATTATTATACAGGGTGATTCTTACGAAAGAAGACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000351273.11
CDS-3UTR TCA 90 bp TATTTCTCTCCGGACAACTGTGGCAGAGAATACAACCATCCTATGCATAACAGCCAGGAGGGACAATTCTaGCAATTCTCTCAACTTAGT +
Preference number: 4 (lower is better)
Translates to: YFSPDNCGREYNHPMHNSQEGQF*QFSQLS
Trigger: ACTAAGTTGAGAGAATTGTCAGAATTGTCCCTCCTG...GCTGTTATGCATAGGATGGTTGTATTCTCTGCCACAGTTGTCCGGAGAGAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000351273.11
CDS-3UTR TCA 90 bp CCCATTTTCCTCAAAGCTGGGGGTAATGGCCAAAGTATGTTCTCAAAGCATCATCAGGAGGGACAATTCTaGCAATTCTCTCAACTTAGT +
Preference number: 4 (lower is better)
Translates to: PIFLKAGGNGQSMFSKHHQEGQF*QFSQLS
Trigger: ACTAAGTTGAGAGAATTGTCAGAATTGTCCCTCCTG...ATGATGCTTTGAGAACATACTTTGGCCATTACCCCCAGCTTTGAGGAAAATGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000475741.5
CDS-3UTR TCA 90 bp GATTGGAGTTTGGCTTCTTATTTCTCTCCGGACAACTGTGGCAGAGAATACAACTTGCAGGTAAAAGGCTaGTTGGAGTTTGGCTTCTTA +
Preference number: 4 (lower is better)
Translates to: DWSLASYFSPDNCGREYNLQVKG*LEFGFL
Trigger: TAAGAAGCCAAACTCCAATCAGCCTTTTACCTGCAA...GTTGTATTCTCTGCCACAGTTGTCCGGAGAGAAATAAGAAGCCAAACTCCAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000351273.11
CDS-3UTR GCA 90 bp GATTGGAGTTTGGCTTCTTATTTCTCTCCGGACAACTGTGGCAGAGAATACAACTCCGGTCAACGTCTGTaGTTCGAATATAAACCTGTT +
Preference number: 4 (lower is better)
Translates to: DWSLASYFSPDNCGREYNSGQRL*FEYKPV
Trigger: AACAGGTTTATATTCGAAGCACAGACGTTGACCGGA...GTTGTATTCTCTGCCACAGTTGTCCGGAGAGAAATAAGAAGCCAAACTCCAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000351273.11
CDS-3UTR GCA 90 bp AGAGAATACAACCATCCTATGCATAACAGCCTCTTTCTAGCTGAACAAGCAGCCCTCACAGTAGTGTCATaGGCAGAATACATGATGAGT +
Preference number: 4 (lower is better)
Translates to: REYNHPMHNSLFLAEQAALTVVS*AEYMMS
Trigger: ACTCATCATGTATTCTGCGCATGACACTACTGTGAG...GGCTGCTTGTTCAGCTAGAAAGAGGCTGTTATGCATAGGATGGTTGTATTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000351273.11
CDS-3UTR GCA 90 bp GTTTGCTTAGGTTTTCTGAAGATATCGGCATTAAAGACTTACACATTCCTTTTGAGGGTCTCGCTCTCTTaGCCTGGCTGGAGTACAGTA +
Preference number: 4 (lower is better)
Translates to: VCLGFLKISALKTYTFLLRVSLS*PGWSTV
Trigger: TACTGTACTCCAGCCAGGGCAAGAGAGCGAGACCCT...CAAAAGGAATGTGTAAGTCTTTAATGCCGATATCTTCAGAAAACCTAAGCAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR CCA 90 bp GTAAGTTTGCTTAGGTTTTCTGAAGATATCGGCATTAAAGACTTACACATTCCTCCCAGCTGGGTGAGTTaGCCAAATCCTTGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: VSLLRFSEDIGIKDLHIPPSWVS*PNPCGH
Trigger: ATGGCCACAAGGATTTGGCCAACTCACCCAGCTGGG...AGGAATGTGTAAGTCTTTAATGCCGATATCTTCAGAAAACCTAAGCAAACTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR CCA 90 bp CATTTACTTGGGAGGGAAATAACACAAAGAAGCATATCAATCGATGTCTTTGTCAACCAGGAGCGGGGATaGCTTTGCTCTAGATTCTGG +
Preference number: 4 (lower is better)
Translates to: HLLGREITQRSISIDVFVNQERG*LCSRFW
Trigger: CCAGAATCTAGAGCAAAGCCATCCCCGCTCCTGGTT...GACAAAGACATCGATTGATATGCTTCTTTGTGTTATTTCCCTCCCAAGTAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000507647.1
CDS-3UTR CCA 90 bp AAGCATATCAATCGATGTCTTTGTCAGTCATTCTGTGACCAACCAGGAGCGGGGTCACTATTTTACATTTaGCTCACTGCTAGAAGACAG +
Preference number: 4 (lower is better)
Translates to: KHINRCLCQSFCDQPGAGSLFYI*LTARRQ
Trigger: CTGTCTTCTAGCAGTGAGCCAAATGTAAAATAGTGA...CCCCGCTCCTGGTTGGTCACAGAATGACTGACAAAGACATCGATTGATATGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR CCA 90 bp GTTTGGCTTCTTATTTCTCTCCGGACAACTGTGGCAGAGAATACAACCATCCTAAGTCCACGGCGAATGTaGATAAACAGTAGTACCATT +
Preference number: 4 (lower is better)
Translates to: VWLLISLRTTVAENTTILSPRRM*INSSTI
Trigger: AATGGTACTACTGTTTATCCACATTCGCCGTGGACT...TAGGATGGTTGTATTCTCTGCCACAGTTGTCCGGAGAGAAATAAGAAGCCAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000351273.11
CDS-3UTR TCA 90 bp GTAAGTTTGCTTAGGTTTTCTGAAGATATCGGCATTAAAGACTTACACATTCCTGAGGTAGGAATTGCCTaGGGTTGGGGGTCCCTAAAA +
Preference number: 4 (lower is better)
Translates to: VSLLRFSEDIGIKDLHIPEVGIA*GWGSLK
Trigger: TTTTAGGGACCCCCAACCTCAGGCAATTCCTACCTC...AGGAATGTGTAAGTCTTTAATGCCGATATCTTCAGAAAACCTAAGCAAACTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR TCA 90 bp TGGGAGGGAAATAACACAAAGAAGCATATCAATCGATGTCTTTGTCAGTCATTCTTCTTTGCCTCTCCTTaGGAGAAGGCTGGAACTGAT +
Preference number: 4 (lower is better)
Translates to: WEGNNTKKHINRCLCQSFFFASP*EKAGTD
Trigger: ATCAGTTCCAGCCTTCTCTCAAGGAGAGGCAAAGAA...GAATGACTGACAAAGACATCGATTGATATGCTTCTTTGTGTTATTTCCCTCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR TCA 90 bp AATAACACAAAGAAGCATATCAATCGATGTCTTTGTCAGTCATTCTGTGACCAACTGATCTTGACCTCCTaGGCTCAAGTGATCTGCCCA +
Preference number: 4 (lower is better)
Translates to: NNTKKHINRCLCQSFCDQLILTS*AQVICP
Trigger: TGGGCAGATCACTTGAGCTCAGGAGGTCAAGATCAG...TTGGTCACAGAATGACTGACAAAGACATCGATTGATATGCTTCTTTGTGTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR GCA 90 bp CCCATTTTCCTCAAAGCTGGGGGTAATGGCCAAAGTATGTTCTCAAAGCATCATTTTCCTGATGTGTTGTaGCCAAATAGCTTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: PIFLKAGGNGQSMFSKHHFPDVL*PNSLFS
Trigger: TGAGAACAAGCTATTTGGGCACAACACATCAGGAAA...ATGATGCTTTGAGAACATACTTTGGCCATTACCCCCAGCTTTGAGGAAAATGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR CCA 90 bp AGAATCACCCTGTATAATAATACTTCTAGTCTAACTTCCCCCAATATCCAGTATTGGGAAAGGTGTCAATaGGACTTCGGTCTCCATGCC +
Preference number: 4 (lower is better)
Translates to: RITLYNNTSSLTSPNIQYWERCQ*DFGLHA
Trigger: GGCATGGAGACCGAAGTCCCATTGACACCTTTCCCA...ATACTGGATATTGGGGGAAGTTAGACTAGAAGTATTATTATACAGGGTGATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000351273.11
CDS-3UTR TCA 90 bp AGAATCACCCTGTATAATAATACTTCTAGTCTAACTTCCCCCAATATCCAGTATAACGAGGGCAGTTCCTaGAAGGCAGGTATAGCAACT +
Preference number: 4 (lower is better)
Translates to: RITLYNNTSSLTSPNIQYNEGSS*KAGIAT
Trigger: AGTTGCTATACCTGCCTTTCAGGAACTGCCCTCGTT...ATACTGGATATTGGGGGAAGTTAGACTAGAAGTATTATTATACAGGGTGATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000351273.11
CDS-3UTR TCA 90 bp CCCATTTTCCTCAAAGCTGGGGGTAATGGCCAAAGTATGTTCTCAAAGCATCATCCTAAGCTTTATCTCTaGTTATATTTTGGCACTGCT +
Preference number: 4 (lower is better)
Translates to: PIFLKAGGNGQSMFSKHHPKLYL*LYFGTA
Trigger: AGCAGTGCCAAAATATAATCAGAGATAAAGCTTAGG...ATGATGCTTTGAGAACATACTTTGGCCATTACCCCCAGCTTTGAGGAAAATGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR CCA 90 bp TCTAGTCTAACTTCCCCCAATATCCAGTATTTTTCTAATCTATGTCTTTGTCCAACCAGGACACCCCCTTaGAGCCTAGATTTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: SSLTSPNIQYFSNLCLCPTRTPP*SLDFSF
Trigger: GAAAGAGAAATCTAGGCTCCAAGGGGGTGTCCTGGT...TGGACAAAGACATAGATTAGAAAAATACTGGATATTGGGGGAAGTTAGACTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000351273.11
CDS-3UTR CCA 90 bp CATTTACTTGGGAGGGAAATAACACAAAGAAGCATATCAATCGATGTCTTTGTCTTTCTTCTTGCAGAGTaGGCAGTTTCAGCAGGACCT +
Preference number: 4 (lower is better)
Translates to: HLLGREITQRSISIDVFVFLLAE*AVSAGP
Trigger: AGGTCCTGCTGAAACTGCCCACTCTGCAAGAAGAAA...GACAAAGACATCGATTGATATGCTTCTTTGTGTTATTTCCCTCCCAAGTAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000507647.1
CDS-3UTR CCA 90 bp TGGGAGGGAAATAACACAAAGAAGCATATCAATCGATGTCTTTGTCAGTCATTCCTTTGCTCTAGATTCTaGCAGCCAGTAGAAACCATC +
Preference number: 4 (lower is better)
Translates to: WEGNNTKKHINRCLCQSFLCSRF*QPVETI
Trigger: GATGGTTTCTACTGGCTGCCAGAATCTAGAGCAAAG...GAATGACTGACAAAGACATCGATTGATATGCTTCTTTGTGTTATTTCCCTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000507647.1
CDS-3UTR CCA 90 bp TCTAGTCTAACTTCCCCCAATATCCAGTATTTTTCTAATCTATGTCTTTGTCCACTCTCCGGACAACTGTaGCAGAGAATACAACCATCC +
Preference number: 4 (lower is better)
Translates to: SSLTSPNIQYFSNLCLCPLSGQL*QRIQPS
Trigger: GGATGGTTGTATTCTCTGCCACAGTTGTCCGGAGAG...TGGACAAAGACATAGATTAGAAAAATACTGGATATTGGGGGAAGTTAGACTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000351273.11
CDS-3UTR TCA 90 bp CATGGGAACTCTATGAACTTTGACCTAAGCTTTATCTCTGATTATATTTTGGCAAAATCCTTGTGGCCATaGGGATTCCTTTATGGGGTC +
Preference number: 4 (lower is better)
Translates to: HGNSMNFDLSFISDYILAKSLWP*GFLYGV
Trigger: GACCCCATAAAGGAATCCTCATGGCCACAAGGATTT...TGCCAAAATATAATCAGAGATAAAGCTTAGGTCAAAGTTCATAGAGTTCCCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR TCA 90 bp AGAATCACCCTGTATAATAATACTTCTAGTCTAACTTCCCCCAATATCCAGTATCCCAGGAGGGTAAAGTaGAATTGTGAACACTCTCAC +
Preference number: 4 (lower is better)
Translates to: RITLYNNTSSLTSPNIQYPRRVK*NCEHSH
Trigger: GTGAGAGTGTTCACAATTTCACTTTACCCTCCTGGG...ATACTGGATATTGGGGGAAGTTAGACTAGAAGTATTATTATACAGGGTGATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000351273.11
CDS-3UTR TCA 90 bp ACTTGGGAGGGAAATAACACAAAGAAGCATATCAATCGATGTCTTTGTCAGTCACAGGAGGGACAATTCTaGCAATTCTCTCAACTTAGT +
Preference number: 4 (lower is better)
Translates to: TWEGNNTKKHINRCLCQSQEGQF*QFSQLS
Trigger: ACTAAGTTGAGAGAATTGTCAGAATTGTCCCTCCTG...TGACTGACAAAGACATCGATTGATATGCTTCTTTGTGTTATTTCCCTCCCAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR TCA 90 bp AATAACACAAAGAAGCATATCAATCGATGTCTTTGTCAGTCATTCTGTGACCAAGTTTCAGCAGGACCTTaGTGGCTGTTTGTGGTCATA +
Preference number: 4 (lower is better)
Translates to: NNTKKHINRCLCQSFCDQVSAGP*WLFVVI
Trigger: TATGACCACAAACAGCCATCAAGGTCCTGCTGAAAC...TTGGTCACAGAATGACTGACAAAGACATCGATTGATATGCTTCTTTGTGTTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507647.1
CDS-3UTR CCA 90 bp GGAAATAACACAAAGAAGCATATCAATCGATGTCTTTGTCAGTCATTCTGTGACGGACTCCCAAAATGCTaGGATTATAGGCGTAAACCA +
Preference number: 4 (lower is better)
Translates to: GNNTKKHINRCLCQSFCDGLPKC*DYRRKP
Trigger: TGGTTTACGCCTATAATCCCAGCATTTTGGGAGTCC...GTCACAGAATGACTGACAAAGACATCGATTGATATGCTTCTTTGTGTTATTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR CCA 90 bp TCTAGTCTAACTTCCCCCAATATCCAGTATTTTTCTAATCTATGTCTTTGTCCAAGGCTGATTGGAGTTTaGCTTCTTATTTCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: SSLTSPNIQYFSNLCLCPRLIGV*LLISLR
Trigger: CCGGAGAGAAATAAGAAGCCAAACTCCAATCAGCCT...TGGACAAAGACATAGATTAGAAAAATACTGGATATTGGGGGAAGTTAGACTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000351273.11
3UTR CAA 72 bp GGTGCTCTCTTTCCTGATGTGTTGTGCCCAAATAGCTaGTTCTCATCAGATGACTTATTTGCTATGATATAT +
Preference number: 4 (lower is better)
Translates to: GALFPDVLCPNS*FSSDDLFAMIY
Trigger: ATATATCATAGCAAATAAGTCATCTGATGAGAACAAGCTATTTGGGCACAACACATCAGGAAAGAGAGCACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR TCA 90 bp CATGGGAACTCTATGAACTTTGACCTAAGCTTTATCTCTGATTATATTTTGGCACATTCCAATAAGTTTTaGACTTGGAGGCACTTAGAA +
Preference number: 4 (lower is better)
Translates to: HGNSMNFDLSFISDYILAHSNKF*TWRHLE
Trigger: TTCTAAGTGCCTCCAAGTTCAAAACTTATTGGAATG...TGCCAAAATATAATCAGAGATAAAGCTTAGGTCAAAGTTCATAGAGTTCCCATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR CCA 90 bp GTAAGTTTGCTTAGGTTTTCTGAAGATATCGGCATTAAAGACTTACACATTCCTTGTAGATCTGCCACATaGCAAAGCTATATCATGATT +
Preference number: 4 (lower is better)
Translates to: VSLLRFSEDIGIKDLHIPCRSAT*QSYIMI
Trigger: AATCATGATATAGCTTTGCCATGTGGCAGATCTACA...AGGAATGTGTAAGTCTTTAATGCCGATATCTTCAGAAAACCTAAGCAAACTTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336375.10
3UTR CAA 72 bp ATGAACTTTGACCTAAGCTTTATCTCTGATTATATTTaGGCACTGCTGCCCCTTTACATTAACGCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: MNFDLSFISDYI*ALLPLYINAEK
Trigger: TTTTTCAGCGTTAATGTAAAGGGGCAGCAGTGCCAAAATATAATCAGAGATAAAGCTTAGGTCAAAGTTCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR CCA 90 bp GTAAGTTTGCTTAGGTTTTCTGAAGATATCGGCATTAAAGACTTACACATTCCTTACAAGCATAGAAAATaGACCCAAGGACAAACATTT +
Preference number: 4 (lower is better)
Translates to: VSLLRFSEDIGIKDLHIPYKHRK*TQGQTF
Trigger: AAATGTTTGTCCTTGGGTCCATTTTCTATGCTTGTA...AGGAATGTGTAAGTCTTTAATGCCGATATCTTCAGAAAACCTAAGCAAACTTAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR CCA 90 bp ACATTTACTTGGGAGGGAAATAACACAAAGAAGCATATCAATCGATGTCTTTGTTACAAGCATAGAAAATaGACCCAAGGACAAACATTT +
Preference number: 4 (lower is better)
Translates to: TFTWEGNNTKKHINRCLCYKHRK*TQGQTF
Trigger: AAATGTTTGTCCTTGGGTCCATTTTCTATGCTTGTA...ACAAAGACATCGATTGATATGCTTCTTTGTGTTATTTCCCTCCCAAGTAAATGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000507647.1
CDS TCA 90 bp CAGCAAACCTCTCCAGAGGACAGCTGGGGCTGCAGCCAGGTAGCATaGGGGGATACGGCTCGTGCTGCGTCTCATTCCGATAGTACATCT +
Preference number: 5 (lower is better)
Translates to: QQTSPEDSWGCSQVA*GDTARAASHSDSTS
Trigger: AGATGTACTATCGGAATGAGACGCAGCACGAGCCGTATCCCCTCATGCTACCTGGCTGCAGCCCCAGCTGTCCTCTGGAGAGGTTTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336375.10
ENST00000351273.11
ENST00000475741.5
ENST00000507647.1
CDS-3UTR CAA 90 bp AGCATCATCTGCCCTGAGAAAGGGCAGCTACTCCTTCTACAGAGATCTCTGTGCGCCCAGCTGGGTGAGTaGGCCAAATCCTTGTGGCCA +
Preference number: 5 (lower is better)
Translates to: SIICPEKGQLLLLQRSLCAQLGE*AKSLWP
Trigger: TGGCCACAAGGATTTGGCCAACTCACCCAGCTGGGC...GCACAGAGATCTCTGTAGAAGGAGTAGCTGCCCTTTCTCAGGGCAGATGATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000475741.5
CDS-3UTR CAA 90 bp GCCTGTCCTTTAGATGCGGCACCACTGAGAGATGCTGTGTCACAGGAGGTTGGCGACCAGGACACCCCCTaGGAGCCTAGATTTCTCTTT +
Preference number: 5 (lower is better)
Translates to: ACPLDAAPLRDAVSQEVGDQDTP*EPRFLF
Trigger: AAAGAGAAATCTAGGCTCCAAGGGGGTGTCCTGGTC...GCCAACCTCCTGTGACACAGCATCTCTCAGTGGTGCCGCATCTAAAGGACAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000351273.11
CDS-3UTR CAA 90 bp AGCATCATCTGCCCTGAGAAAGGGCAGCTACTCCTTCTACAGAGATCTCTGTGCCTCCGTGGACCAGTCTaGAGGGATCACAGGGCCAAC +
Preference number: 5 (lower is better)
Translates to: SIICPEKGQLLLLQRSLCLRGPV*RDHRAN
Trigger: GTTGGCCCTGTGATCCCTCAAGACTGGTCCACGGAG...GCACAGAGATCTCTGTAGAAGGAGTAGCTGCCCTTTCTCAGGGCAGATGATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000475741.5
CDS TCA 90 bp CTGCTCCATGCCCAGCTGGGTGAGTTGGCCAAATCCTTGTGGCCATaGGGATTCCTTTATGGGGTCAGTGGGAAAGGTGTCAATGGGACT +
Preference number: 5 (lower is better)
Translates to: LLHAQLGELAKSLWP*GFLYGVSGKGVNGT
Trigger: AGTCCCATTGACACCTTTCCCACTGACCCCATAAAGGAATCCTCATGGCCACAAGGATTTGGCCAACTCACCCAGCTGGGCATGGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336375.10
ENST00000351273.11
ENST00000475741.5
ENST00000489084.5
ENST00000493235.5
CDS GCA 90 bp CCACATGGCAAAAGCCTGTCCTTTAGATGCGGCACCACTGAGAGATaGTGTGTCACAGGAGGTTGGCCTGGCTTATCCAGCTGTCTGTTC +
Preference number: 5 (lower is better)
Translates to: PHGKSLSFRCGTTER*CVTGGWPGLSSCLF
Trigger: GAACAGACAGCTGGATAAGCCAGGCCAACCTCCTGTGACACAGCATCTCTCAGTGGTGCCGCATCTAAAGGACAGGCTTTTGCCATGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000351273.11
CDS CCA 90 bp CAGTTTCAGCAGGACCTTGATGGCTGTTTGTGGTCATACACTCCGTaGACCAGTCTTGAGGGATCACAGGGCCAACCAGCTCAGCAAACC +
Preference number: 5 (lower is better)
Translates to: QFQQDLDGCLWSYTP*TSLEGSQGQPAQQT
Trigger: GGTTTGCTGAGCTGGTTGGCCCTGTGATCCCTCAAGACTGGTCCACGGAGTGTATGACCACAAACAGCCATCAAGGTCCTGCTGAAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507647.1
CDS-3UTR CAA 90 bp ATCAATCGATGTCTTTGTCAGTCATTCTGTGACCAACCAGGAGCGGGGATGGCTCTCCGTGGACCAGTCTaGAGGGATCACAGGGCCAAC +
Preference number: 5 (lower is better)
Translates to: INRCLCQSFCDQPGAGMALRGPV*RDHRAN
Trigger: GTTGGCCCTGTGATCCCTCAAGACTGGTCCACGGAG...AGCCATCCCCGCTCCTGGTTGGTCACAGAATGACTGACAAAGACATCGATTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000507647.1
CDS-3UTR CAA 90 bp AGCATCATCTGCCCTGAGAAAGGGCAGCTACTCCTTCTACAGAGATCTCTGTGCGGTGCAGCTCTCATGTaGAGGAGAGCTGTTTCTGGC +
Preference number: 5 (lower is better)
Translates to: SIICPEKGQLLLLQRSLCGAALM*RRAVSG
Trigger: GCCAGAAACAGCTCTCCTCAACATGAGAGCTGCACC...GCACAGAGATCTCTGTAGAAGGAGTAGCTGCCCTTTCTCAGGGCAGATGATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000475741.5
CDS CCA 90 bp GTTGGCCAAATCCTTGTGGCCATGAGGATTCCTTTATGGGGTCAGTaGGAAAGGTGTCAATGGGACTTCGGTCTCCATGCCGAAACACCA +
Preference number: 5 (lower is better)
Translates to: VGQILVAMRIPLWGQ*ERCQWDFGLHAETP
Trigger: TGGTGTTTCGGCATGGAGACCGAAGTCCCATTGACACCTTTCCCACTGACCCCATAAAGGAATCCTCATGGCCACAAGGATTTGGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336375.10
ENST00000351273.11
ENST00000475741.5
ENST00000489084.5
ENST00000493235.5
ENST00000495911.5
CDS CCA 90 bp TACTGTCTTCAGTACCTTGATGGCTGTTTGTGGTCATACACTCCGTaGACCAGTCTTGAGGGATCACAGGGCCAACCAGCTCAGCAAACC +
Preference number: 5 (lower is better)
Translates to: YCLQYLDGCLWSYTP*TSLEGSQGQPAQQT
Trigger: GGTTTGCTGAGCTGGTTGGCCCTGTGATCCCTCAAGACTGGTCCACGGAGTGTATGACCACAAACAGCCATCAAGGTACTGAAGACAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000475741.5
CDS-3UTR CAA 90 bp CTCAAAGCATCATCTGCCCTGAGAAAGGGCAGCTACTCCTTCTACAGAGATCTCGGTGCAGCTCTCATGTaGAGGAGAGCTGTTTCTGGC +
Preference number: 5 (lower is better)
Translates to: LKASSALRKGSYSFYRDLGAALM*RRAVSG
Trigger: GCCAGAAACAGCTCTCCTCAACATGAGAGCTGCACC...GAGATCTCTGTAGAAGGAGTAGCTGCCCTTTCTCAGGGCAGATGATGCTTTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000475741.5
CDS-3UTR CAA 90 bp AGCATCATCTGCCCTGAGAAAGGGCAGCTACTCCTTCTACAGAGATCTCTGTGCGACCAGGACACCCCCTaGGAGCCTAGATTTCTCTTT +
Preference number: 5 (lower is better)
Translates to: SIICPEKGQLLLLQRSLCDQDTP*EPRFLF
Trigger: AAAGAGAAATCTAGGCTCCAAGGGGGTGTCCTGGTC...GCACAGAGATCTCTGTAGAAGGAGTAGCTGCCCTTTCTCAGGGCAGATGATGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000475741.5
CDS CCA 90 bp TCCTTTAGATGCGGCACCACTGAGAGATGCTGTGTCACAGGAGGTTaGCCTGGCTTATCCAGCTGTCTGTTCAGATGTTCCCATAGGATT +
Preference number: 5 (lower is better)
Translates to: SFRCGTTERCCVTGG*PGLSSCLFRCSHRI
Trigger: AATCCTATGGGAACATCTGAACAGACAGCTGGATAAGCCAGGCCAACCTCCTGTGACACAGCATCTCTCAGTGGTGCCGCATCTAAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000351273.11
CDS-3UTR CAA 90 bp ATCATCTGCCCTGAGAAAGGGCAGCTACTCCTTCTACAGAGATCTCTGTGCACAGACCAGGACACCCCCTaGGAGCCTAGATTTCTCTTT +
Preference number: 5 (lower is better)
Translates to: IICPEKGQLLLLQRSLCTDQDTP*EPRFLF
Trigger: AAAGAGAAATCTAGGCTCCAAGGGGGTGTCCTGGTC...TGTGCACAGAGATCTCTGTAGAAGGAGTAGCTGCCCTTTCTCAGGGCAGATGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000475741.5
CDS-3UTR CAA 90 bp AATCGATGTCTTTGTCAGTCATTCTGTGACCAACCAGGAGCGGGGATGGCTTTGTTGACCAGGCTGGTCTaGAACACACCAGGCCTAAAG +
Preference number: 5 (lower is better)
Translates to: NRCLCQSFCDQPGAGMALLTRLV*NTPGLK
Trigger: CTTTAGGCCTGGTGTGTTCAAGACCAGCCTGGTCAA...CAAAGCCATCCCCGCTCCTGGTTGGTCACAGAATGACTGACAAAGACATCGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS TCA 90 bp GCTGGGGGTAATGGCCAAAGTATGTTCTCAAAGCATCATCTGCCCTaGGAAAGGGCAGCTACTCCTTCTACAGAGATCTCTGTGCACACT +
Preference number: 5 (lower is better)
Translates to: AGGNGQSMFSKHHLP*ERAATPSTEISVHT
Trigger: AGTGTGCACAGAGATCTCTGTAGAAGGAGTAGCTGCCCTTTCTCAGGGCAGATGATGCTTTGAGAACATACTTTGGCCATTACCCCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000475741.5
CDS CCA 90 bp GTGGCCATGAGGATTCCTTTATGGGGTCAGTGGGAAAGGTGTCAATaGGACTTCGGTCTCCATGCCGAAACACCAAAGTCACAAACTTCA +
Preference number: 5 (lower is better)
Translates to: VAMRIPLWGQWERCQ*DFGLHAETPKSQTS
Trigger: TGAAGTTTGTGACTTTGGTGTTTCGGCATGGAGACCGAAGTCCCATTGACACCTTTCCCACTGACCCCATAAAGGAATCCTCATGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336375.10
ENST00000351273.11
ENST00000475741.5
ENST00000489084.5
ENST00000493235.5
ENST00000495911.5
CDS CCA 90 bp GTGCACACTAATCTGTACTGTCTTCAGTACCTTGATGGCTGTTTGTaGTCATACACTCCGTGGACCAGTCTTGAGGGATCACAGGGCCAA +
Preference number: 5 (lower is better)
Translates to: VHTNLYCLQYLDGCL*SYTPWTSLEGSQGQ
Trigger: TTGGCCCTGTGATCCCTCAAGACTGGTCCACGGAGTGTATGACCACAAACAGCCATCAAGGTACTGAAGACAGTACAGATTAGTGTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000475741.5
CDS-3UTR CAA 90 bp CTTATTTCTCTCCGGACAACTGTGGCAGAGAATACAACCATCCTATGCATAACAGCCCAGCTGGGTGAGTaGGCCAAATCCTTGTGGCCA +
Preference number: 5 (lower is better)
Translates to: LISLRTTVAENTTILCITAQLGE*AKSLWP
Trigger: TGGCCACAAGGATTTGGCCAACTCACCCAGCTGGGC...TGTTATGCATAGGATGGTTGTATTCTCTGCCACAGTTGTCCGGAGAGAAATAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000351273.11
CDS-3UTR CAA 90 bp ATCATCTGCCCTGAGAAAGGGCAGCTACTCCTTCTACAGAGATCTCTGTGCACATACCTTGATGGCTGTTaGTGGTCATACACTCCGTGG +
Preference number: 5 (lower is better)
Translates to: IICPEKGQLLLLQRSLCTYLDGC*WSYTPW
Trigger: CCACGGAGTGTATGACCACAAACAGCCATCAAGGTA...TGTGCACAGAGATCTCTGTAGAAGGAGTAGCTGCCCTTTCTCAGGGCAGATGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000475741.5
CDS-3UTR CAA 90 bp AAGCATATCAATCGATGTCTTTGTCAGTCATTCTGTGACCAACCAGGAGCGGGGGACCTTGATGGCTGTTaGTGGTCATACACTCCGTGG +
Preference number: 5 (lower is better)
Translates to: KHINRCLCQSFCDQPGAGDLDGC*WSYTPW
Trigger: CCACGGAGTGTATGACCACAAACAGCCATCAAGGTC...CCCCGCTCCTGGTTGGTCACAGAATGACTGACAAAGACATCGATTGATATGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507647.1
CDS TCA 90 bp GCTTCGAATATAAACCTGGGTGAGTTGGCCAAATCCTTGTGGCCATaGGGATTCCTTTATGGGGTCAGTGGGAAAGGTGTCAATGGGACT +
Preference number: 5 (lower is better)
Translates to: ASNINLGELAKSLWP*GFLYGVSGKGVNGT
Trigger: AGTCCCATTGACACCTTTCCCACTGACCCCATAAAGGAATCCTCATGGCCACAAGGATTTGGCCAACTCACCCAGGTTTATATTCGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495911.5
CDS-3UTR CAA 90 bp GTTTGGCTTCTTATTTCTCTCCGGACAACTGTGGCAGAGAATACAACCATCCTAGGTGCAGCTCTCATGTaGAGGAGAGCTGTTTCTGGC +
Preference number: 5 (lower is better)
Translates to: VWLLISLRTTVAENTTILGAALM*RRAVSG
Trigger: GCCAGAAACAGCTCTCCTCAACATGAGAGCTGCACC...TAGGATGGTTGTATTCTCTGCCACAGTTGTCCGGAGAGAAATAAGAAGCCAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000351273.11
CDS-3UTR CAA 90 bp AGTCATTCTGTGACCAACCAGGAGCGGGGATGGCTTTGCTCTAGATTCTGGCAGATCTCTGATTATATTTaGGCACTGCTGCCCCTTTAC +
Preference number: 5 (lower is better)
Translates to: SHSVTNQERGWLCSRFWQISDYI*ALLPLY
Trigger: GTAAAGGGGCAGCAGTGCCAAAATATAATCAGAGAT...CTGCCAGAATCTAGAGCAAAGCCATCCCCGCTCCTGGTTGGTCACAGAATGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR CAA 90 bp TTTGCAGGTAAAAGGCTGATTGGAGTTTGGCTTCTTATTTCTCTCCGGACAACTCTGTGTCACAGGAGGTaGGCCTGGCTTATCCAGCTG +
Preference number: 5 (lower is better)
Translates to: FAGKRLIGVWLLISLRTTLCHRR*AWLIQL
Trigger: CAGCTGGATAAGCCAGGCCAACCTCCTGTGACACAG...AGTTGTCCGGAGAGAAATAAGAAGCCAAACTCCAATCAGCCTTTTACCTGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000351273.11
CDS TCA 90 bp CTCTTTCTGCTTGTGAATTCCATAGAGGGACAGGAGGGACAATTCTaGCAATTCTCTCAACTTAGTCATGGTGTCCTCAGTGGCCCAGGA +
Preference number: 5 (lower is better)
Translates to: LFLLVNSIEGQEGQF*QFSQLSHGVLSGPG
Trigger: TCCTGGGCCACTGAGGACACCATGACTAAGTTGAGAGAATTGTCAGAATTGTCCCTCCTGTCCCTCTATGGAATTCACAAGCAGAAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336375.10
ENST00000351273.11
ENST00000475741.5
ENST00000512463.1
CDS-3UTR CAA 90 bp ATCAATCGATGTCTTTGTCAGTCATTCTGTGACCAACCAGGAGCGGGGATGGCTACAAACTTCAACTCCTaGGCTAGTACACTTCGGTCT +
Preference number: 5 (lower is better)
Translates to: INRCLCQSFCDQPGAGMATNFNS*ASTLRS
Trigger: AGACCGAAGTGTACTAGCCAAGGAGTTGAAGTTTGT...AGCCATCCCCGCTCCTGGTTGGTCACAGAATGACTGACAAAGACATCGATTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR CAA 90 bp TGGGAGGGAAATAACACAAAGAAGCATATCAATCGATGTCTTTGTCAGTCATTCGCCCAGCTGGGTGAGTaGGCCAAATCCTTGTGGCCA +
Preference number: 5 (lower is better)
Translates to: WEGNNTKKHINRCLCQSFAQLGE*AKSLWP
Trigger: TGGCCACAAGGATTTGGCCAACTCACCCAGCTGGGC...GAATGACTGACAAAGACATCGATTGATATGCTTCTTTGTGTTATTTCCCTCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR CAA 90 bp AGCATATCAATCGATGTCTTTGTCAGTCATTCTGTGACCAACCAGGAGCGGGGACTCACTCTCAAGTTCTaGAAAACGAGGGCAGTTCCT +
Preference number: 5 (lower is better)
Translates to: SISIDVFVSHSVTNQERGLTLKF*KTRAVP
Trigger: AGGAACTGCCCTCGTTTTCAAGAACTTGAGAGTGAG...TCCCCGCTCCTGGTTGGTCACAGAATGACTGACAAAGACATCGATTGATATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR CAA 90 bp GGGAGGGAAATAACACAAAGAAGCATATCAATCGATGTCTTTGTCAGTCATTCTCTCCGTGGACCAGTCTaGAGGGATCACAGGGCCAAC +
Preference number: 5 (lower is better)
Translates to: GREITQRSISIDVFVSHSLRGPV*RDHRAN
Trigger: GTTGGCCCTGTGATCCCTCAAGACTGGTCCACGGAG...AGAATGACTGACAAAGACATCGATTGATATGCTTCTTTGTGTTATTTCCCTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000507647.1
CDS-3UTR CAA 90 bp CTCAAAGCATCATCTGCCCTGAGAAAGGGCAGCTACTCCTTCTACAGAGATCTCACTGTCTTCAGTACCTaGATGGCTGTTTGTGGTCAT +
Preference number: 5 (lower is better)
Translates to: LKASSALRKGSYSFYRDLTVFST*MAVCGH
Trigger: ATGACCACAAACAGCCATCAAGGTACTGAAGACAGT...GAGATCTCTGTAGAAGGAGTAGCTGCCCTTTCTCAGGGCAGATGATGCTTTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000475741.5
CDS-3UTR CAA 90 bp GAGCGGGGATGGCTTTGCTCTAGATTCTGGCAGCCAGTAGAAACCATCTCTAGATATCATGATTTCTTCTaGCAGAGTGGGCAGTTTCAG +
Preference number: 5 (lower is better)
Translates to: ERGWLCSRFWQPVETISRYHDFF*QSGQFQ
Trigger: CTGAAACTGCCCACTCTGCAAGAAGAAATCATGATA...TCTAGAGATGGTTTCTACTGGCTGCCAGAATCTAGAGCAAAGCCATCCCCGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000507647.1
CDS-3UTR CAA 90 bp AGGCTGATTGGAGTTTGGCTTCTTATTTCTCTCCGGACAACTGTGGCAGAGAATGAACTTGATGGCTGTTaGTGGTCATACACTCCGTGG +
Preference number: 5 (lower is better)
Translates to: RLIGVWLLISLRTTVAENELDGC*WSYTPW
Trigger: CCACGGAGTGTATGACCACAAACAGCCATCAAGTTC...ATTCTCTGCCACAGTTGTCCGGAGAGAAATAAGAAGCCAAACTCCAATCAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000351273.11
CDS GCA 90 bp ATCTGCCCTGAGAAAGGGCAGCTACTCCTTCTACAGAGATCTCTGTaGACACTAATCTGTACTGTCTTCAGTACCTTGATGGCTGTTTGT +
Preference number: 5 (lower is better)
Translates to: ICPEKGQLLLLQRSL*TLICTVFSTLMAVC
Trigger: ACAAACAGCCATCAAGGTACTGAAGACAGTACAGATTAGTGTGCACAGAGATCTCTGTAGAAGGAGTAGCTGCCCTTTCTCAGGGCAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000475741.5
CDS-3UTR CAA 90 bp AGGCTGATTGGAGTTTGGCTTCTTATTTCTCTCCGGACAACTGTGGCAGAGAATCTCACTCTCAAGTTCTaGAAAACGAGGGCAGTTCCT +
Preference number: 5 (lower is better)
Translates to: RLIGVWLLISLRTTVAENLTLKF*KTRAVP
Trigger: AGGAACTGCCCTCGTTTTCAAGAACTTGAGAGTGAG...ATTCTCTGCCACAGTTGTCCGGAGAGAAATAAGAAGCCAAACTCCAATCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000351273.11
CDS GCA 90 bp ACATGTAGATCTGCCACATGGCAAAGCTATATCATGATTTCTTCTTaGAGAGTGGGCAGTTTCAGCAGGACCTTGATGGCTGTTTGTGGT +
Preference number: 5 (lower is better)
Translates to: TCRSATWQSYIMISS*RVGSFSRTLMAVCG
Trigger: ACCACAAACAGCCATCAAGGTCCTGCTGAAACTGCCCACTCTGCAAGAAGAAATCATGATATAGCTTTGCCATGTGGCAGATCTACATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507647.1
CDS-3UTR CAA 90 bp GGTAAAAGGCTGATTGGAGTTTGGCTTCTTATTTCTCTCCGGACAACTGTGGCAACAAACTTCAACTCCTaGGCTAGTACACTTCGGTCT +
Preference number: 5 (lower is better)
Translates to: GKRLIGVWLLISLRTTVATNFNS*ASTLRS
Trigger: AGACCGAAGTGTACTAGCCAAGGAGTTGAAGTTTGT...TGCCACAGTTGTCCGGAGAGAAATAAGAAGCCAAACTCCAATCAGCCTTTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000351273.11
CDS-3UTR CAA 90 bp TCTAGTCTAACTTCCCCCAATATCCAGTATTTTTCTAATCTATGTCTTTGTCCACTCCGTGGACCAGTCTaGAGGGATCACAGGGCCAAC +
Preference number: 5 (lower is better)
Translates to: SSLTSPNIQYFSNLCLCPLRGPV*RDHRAN
Trigger: GTTGGCCCTGTGATCCCTCAAGACTGGTCCACGGAG...TGGACAAAGACATAGATTAGAAAAATACTGGATATTGGGGGAAGTTAGACTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000351273.11
CDS-3UTR CAA 90 bp ACTCCATCACGTGGTGCTCTCTTTCCTGATGTGTTGTGCCCAAATAGCTTGTTCTATCATGATTTCTTCTaGCAGAGTGGGCAGTTTCAG +
Preference number: 5 (lower is better)
Translates to: TPSRGALFPDVLCPNSLFYHDFF*QSGQFQ
Trigger: CTGAAACTGCCCACTCTGCAAGAAGAAATCATGATA...GAACAAGCTATTTGGGCACAACACATCAGGAAAGAGAGCACCACGTGATGGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR CAA 90 bp CCCATTTTCCTCAAAGCTGGGGGTAATGGCCAAAGTATGTTCTCAAAGCATCATCTCTTTCCTGATGTGTaGTGCCCAAATAGCTTGTTC +
Preference number: 5 (lower is better)
Translates to: PIFLKAGGNGQSMFSKHHLFPDV*CPNSLF
Trigger: GAACAAGCTATTTGGGCACAACACATCAGGAAAGAG...ATGATGCTTTGAGAACATACTTTGGCCATTACCCCCAGCTTTGAGGAAAATGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR CAA 90 bp AAGCTGGGGGTAATGGCCAAAGTATGTTCTCAAAGCATCATCTGCCCTGAGAAAGCAGGACCTGTAAGTTaGCTTAGGTTTTCTGAAGAT +
Preference number: 5 (lower is better)
Translates to: KLGVMAKVCSQSIICPEKAGPVS*LRFSED
Trigger: ATCTTCAGAAAACCTAAGCAAACTTACAGGTCCTGC...TTTCTCAGGGCAGATGATGCTTTGAGAACATACTTTGGCCATTACCCCCAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR CAA 90 bp CTTATTTCTCTCCGGACAACTGTGGCAGAGAATACAACCATCCTATGCATAACAAAGGCTGATTGGAGTTaGGCTTCTTATTTCTCTCCG +
Preference number: 5 (lower is better)
Translates to: LISLRTTVAENTTILCITKADWS*ASYFSP
Trigger: CGGAGAGAAATAAGAAGCCAAACTCCAATCAGCCTT...TGTTATGCATAGGATGGTTGTATTCTCTGCCACAGTTGTCCGGAGAGAAATAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000351273.11
CDS CCA 90 bp TCTGTGTATGACGATGAGGGGGCAAATTGCCAAGAGTTGCAAGAGTaGCAAAACAAAGTGGATCATACAGATCCAAAGAGAAATTTGGTT +
Preference number: 5 (lower is better)
Translates to: SVYDDEGANCQELQE*QNKVDHTDPKRNLV
Trigger: AACCAAATTTCTCTTTGGATCTGTATGATCCACTTTGTTTTGCCACTCTTGCAACTCTTGGCAATTTGCCCCCTCATCGTCATACACAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483689.1
CDS-3UTR CAA 90 bp CACATTCCTTTTGTCCTCCTAACGTATTTCGTAACCACACTCTCAACATTCCAAACTGTCTTCAGTACCTaGATGGCTGTTTGTGGTCAT +
Preference number: 5 (lower is better)
Translates to: HIPFVLLTYFVTTLSTFQTVFST*MAVCGH
Trigger: ATGACCACAAACAGCCATCAAGGTACTGAAGACAGT...TTGGAATGTTGAGAGTGTGGTTACGAAATACGTTAGGAGGACAAAAGGAATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR CAA 90 bp CATGGGAACTCTATGAACTTTGACCTAAGCTTTATCTCTGATTATATTTTGGCATACCTTGATGGCTGTTaGTGGTCATACACTCCGTGG +
Preference number: 5 (lower is better)
Translates to: HGNSMNFDLSFISDYILAYLDGC*WSYTPW
Trigger: CCACGGAGTGTATGACCACAAACAGCCATCAAGGTA...TGCCAAAATATAATCAGAGATAAAGCTTAGGTCAAAGTTCATAGAGTTCCCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS-3UTR CAA 90 bp GGGAGGGAAATAACACAAAGAAGCATATCAATCGATGTCTTTGTCAGTCATTCTTTGTGCCCAAATAGCTaGTTCTCATCAGATGACTTA +
Preference number: 5 (lower is better)
Translates to: GREITQRSISIDVFVSHSLCPNS*FSSDDL
Trigger: TAAGTCATCTGATGAGAACAAGCTATTTGGGCACAA...AGAATGACTGACAAAGACATCGATTGATATGCTTCTTTGTGTTATTTCCCTCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336375.10
CDS TCA 72 bp TCTCCAGAGGACAGCTGGGGCTGCAGCCAGGTAGCATaGGGGGATACGGCTCGTGCTGCGTCTCATTCCGAT +
Preference number: 6 (lower is better)
Translates to: SPEDSWGCSQVA*GDTARAASHSD
Trigger: ATCGGAATGAGACGCAGCACGAGCCGTATCCCCTCATGCTACCTGGCTGCAGCCCCAGCTGTCCTCTGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336375.10
ENST00000351273.11
ENST00000475741.5
ENST00000507647.1
CDS CAA 90 bp AGGACCTTGATGGCTGTTTGTGGTCATACACTCCGTGGACCAGTCTaGAGGGATCACAGGGCCAACCAGCTCAGCAAACCTCTCCAGAGG +
Preference number: 6 (lower is better)
Translates to: RTLMAVCGHTLRGPV*RDHRANQLSKPLQR
Trigger: CCTCTGGAGAGGTTTGCTGAGCTGGTTGGCCCTGTGATCCCTCAAGACTGGTCCACGGAGTGTATGACCACAAACAGCCATCAAGGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507647.1
CDS TCA 72 bp GCCCAGCTGGGTGAGTTGGCCAAATCCTTGTGGCCATaGGGATTCCTTTATGGGGTCAGTGGGAAAGGTGTC +
Preference number: 6 (lower is better)
Translates to: AQLGELAKSLWP*GFLYGVSGKGV
Trigger: GACACCTTTCCCACTGACCCCATAAAGGAATCCTCATGGCCACAAGGATTTGGCCAACTCACCCAGCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336375.10
ENST00000351273.11
ENST00000475741.5
ENST00000489084.5
ENST00000493235.5
CDS CCA 72 bp CAGGACCTTGATGGCTGTTTGTGGTCATACACTCCGTaGACCAGTCTTGAGGGATCACAGGGCCAACCAGCT +
Preference number: 6 (lower is better)
Translates to: QDLDGCLWSYTP*TSLEGSQGQPA
Trigger: AGCTGGTTGGCCCTGTGATCCCTCAAGACTGGTCCACGGAGTGTATGACCACAAACAGCCATCAAGGTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507647.1
CDS CAA 90 bp AGTACCTTGATGGCTGTTTGTGGTCATACACTCCGTGGACCAGTCTaGAGGGATCACAGGGCCAACCAGCTCAGCAAACCTCTCCAGAGG +
Preference number: 6 (lower is better)
Translates to: STLMAVCGHTLRGPV*RDHRANQLSKPLQR
Trigger: CCTCTGGAGAGGTTTGCTGAGCTGGTTGGCCCTGTGATCCCTCAAGACTGGTCCACGGAGTGTATGACCACAAACAGCCATCAAGGTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000475741.5
CDS CCA 72 bp CAGTACCTTGATGGCTGTTTGTGGTCATACACTCCGTaGACCAGTCTTGAGGGATCACAGGGCCAACCAGCT +
Preference number: 6 (lower is better)
Translates to: QYLDGCLWSYTP*TSLEGSQGQPA
Trigger: AGCTGGTTGGCCCTGTGATCCCTCAAGACTGGTCCACGGAGTGTATGACCACAAACAGCCATCAAGGTACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000475741.5
CDS GCA 72 bp ATTCCAGATGCTGACACCTTCTGGGGGAAACAGGGCTaGCAGGTTTGTCATAGCACTCATCAAAGTCCGGTC +
Preference number: 6 (lower is better)
Translates to: IPDADTFWGKQG*QVCHSTHQSPV
Trigger: GACCGGACTTTGATGAGTGCTATGACAAACCTGGCAGCCCTGTTTCCCCCAGAAGGTGTCAGCATCTGGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000336375.10
ENST00000351273.11
ENST00000475741.5
ENST00000483689.1
ENST00000489084.5
ENST00000493235.5
ENST00000495911.5
CDS GCA 72 bp TCTTCAGAAAGAGGAACTGTGTGCACCGGGATGGGCTaGCAGAGTAGGATAGGATTCCAGATGCTGACACCT +
Preference number: 6 (lower is better)
Translates to: SSERGTVCTGMG*QSRIGFQMLTP
Trigger: AGGTGTCAGCATCTGGAATCCTATCCTACTCTGGCAGCCCATCCCGGTGCACACAGTTCCTCTTTCTGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336375.10
ENST00000351273.11
ENST00000475741.5
ENST00000483689.1
ENST00000489084.5
ENST00000493235.5
ENST00000495911.5
CDS CCA 72 bp ATCCTTGTGGCCATGAGGATTCCTTTATGGGGTCAGTaGGAAAGGTGTCAATGGGACTTCGGTCTCCATGCC +
Preference number: 6 (lower is better)
Translates to: ILVAMRIPLWGQ*ERCQWDFGLHA
Trigger: GGCATGGAGACCGAAGTCCCATTGACACCTTTCCCACTGACCCCATAAAGGAATCCTCATGGCCACAAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336375.10
ENST00000351273.11
ENST00000475741.5
ENST00000489084.5
ENST00000493235.5
ENST00000495911.5
CDS CCA 72 bp TTAGAACTTGATGGCTGTTTGTGGTCATACACTCCGTaGACCAGTCTTGAGGGATCACAGGGCCAACCAGCT +
Preference number: 6 (lower is better)
Translates to: LELDGCLWSYTP*TSLEGSQGQPA
Trigger: AGCTGGTTGGCCCTGTGATCCCTCAAGACTGGTCCACGGAGTGTATGACCACAAACAGCCATCAAGTTCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000351273.11
CDS CCA 72 bp GAGGGGTGCAGCTCTCATGTTGAGGAGAGCTGTTTCTaGCAGGAGTTAGGAGGAACTGCTACCACTTCAAAA +
Preference number: 6 (lower is better)
Translates to: EGCSSHVEESCF*QELGGTATTSK
Trigger: TTTTGAAGTGGTAGCAGTTCCTCCTAACTCCTGCCAGAAACAGCTCTCCTCAACATGAGAGCTGCACCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495911.5
CDS CAA 90 bp TCTGTGCACACTAATCTGTACTGTCTTCAGTACCTTGATGGCTGTTaGTGGTCATACACTCCGTGGACCAGTCTTGAGGGATCACAGGGC +
Preference number: 6 (lower is better)
Translates to: SVHTNLYCLQYLDGC*WSYTPWTSLEGSQG
Trigger: GCCCTGTGATCCCTCAAGACTGGTCCACGGAGTGTATGACCACAAACAGCCATCAAGGTACTGAAGACAGTACAGATTAGTGTGCACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000475741.5
CDS TCA 72 bp ATAAACCTGGGTGAGTTGGCCAAATCCTTGTGGCCATaGGGATTCCTTTATGGGGTCAGTGGGAAAGGTGTC +
Preference number: 6 (lower is better)
Translates to: INLGELAKSLWP*GFLYGVSGKGV
Trigger: GACACCTTTCCCACTGACCCCATAAAGGAATCCTCATGGCCACAAGGATTTGGCCAACTCACCCAGGTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495911.5
CDS CCA 72 bp AGGATTCCTTTATGGGGTCAGTGGGAAAGGTGTCAATaGGACTTCGGTCTCCATGCCGAAACACCAAAGTCA +
Preference number: 6 (lower is better)
Translates to: RIPLWGQWERCQ*DFGLHAETPKS
Trigger: TGACTTTGGTGTTTCGGCATGGAGACCGAAGTCCCATTGACACCTTTCCCACTGACCCCATAAAGGAATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336375.10
ENST00000351273.11
ENST00000475741.5
ENST00000489084.5
ENST00000493235.5
ENST00000495911.5
CDS CAA 90 bp CTACAGAGATCTCTGTGCACACTAATCTGTACTGTCTTCAGTACCTaGATGGCTGTTTGTGGTCATACACTCCGTGGACCAGTCTTGAGG +
Preference number: 6 (lower is better)
Translates to: LQRSLCTLICTVFST*MAVCGHTLRGPVLR
Trigger: CCTCAAGACTGGTCCACGGAGTGTATGACCACAAACAGCCATCAAGGTACTGAAGACAGTACAGATTAGTGTGCACAGAGATCTCTGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000475741.5
CDS TCA 72 bp CATCTGAAATCTCCTGGTTTTCCCAGTATACTGACCTaGTCTTCAGAAAGAGGAACTGTGTGCACCGGGATG +
Preference number: 6 (lower is better)
Translates to: HLKSPGFPSILT*SSERGTVCTGM
Trigger: CATCCCGGTGCACACAGTTCCTCTTTCTGAAGATCAGGTCAGTATACTGGGAAAACCAGGAGATTTCAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483689.1
CDS GCA 72 bp TCTGCCACATGGCAAAGCTATATCATGATTTCTTCTTaGAGAGTGGGCAGTTTCAGCAGGACCTTGATGGCT +
Preference number: 6 (lower is better)
Translates to: SATWQSYIMISS*RVGSFSRTLMA
Trigger: AGCCATCAAGGTCCTGCTGAAACTGCCCACTCTGCAAGAAGAAATCATGATATAGCTTTGCCATGTGGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507647.1
CDS CAA 72 bp TCTCTGTGCACACTAATCTGTACTGTCTTCAGTACCTaGATGGCTGTTTGTGGTCATACACTCCGTGGACCA +
Preference number: 6 (lower is better)
Translates to: SLCTLICTVFST*MAVCGHTLRGP
Trigger: TGGTCCACGGAGTGTATGACCACAAACAGCCATCAAGGTACTGAAGACAGTACAGATTAGTGTGCACAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000475741.5
CDS CAA 72 bp ATCTGCCACATGGCAAAGCTATATCATGATTTCTTCTaGCAGAGTGGGCAGTTTCAGCAGGACCTTGATGGC +
Preference number: 6 (lower is better)
Translates to: ICHMAKLYHDFF*QSGQFQQDLDG
Trigger: GCCATCAAGGTCCTGCTGAAACTGCCCACTCTGCAAGAAGAAATCATGATATAGCTTTGCCATGTGGCAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507647.1
CDS CAA 90 bp CTCTCTCTCTCTGTGTATGACGATGAGGGGGCAAATTGCCAAGAGTaGCAAGAGTGGCAAAACAAAGTGGATCATACAGATCCAAAGAGA +
Preference number: 6 (lower is better)
Translates to: LSLSVYDDEGANCQE*QEWQNKVDHTDPKR
Trigger: TCTCTTTGGATCTGTATGATCCACTTTGTTTTGCCACTCTTGCAACTCTTGGCAATTTGCCCCCTCATCGTCATACACAGAGAGAGAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483689.1
CDS GCA 72 bp GAGAAAGGGCAGCTACTCCTTCTACAGAGATCTCTGTaGACACTAATCTGTACTGTCTTCAGTACCTTGATG +
Preference number: 6 (lower is better)
Translates to: EKGQLLLLQRSL*TLICTVFSTLM
Trigger: CATCAAGGTACTGAAGACAGTACAGATTAGTGTGCACAGAGATCTCTGTAGAAGGAGTAGCTGCCCTTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336375.10
ENST00000475741.5
CDS GCA 72 bp CTGTGTATGACGATGAGGGGGCAAATTGCCAAGAGTTaGAAGAGTGGCAAAACAAAGTGGATCATACAGATC +
Preference number: 6 (lower is better)
Translates to: LCMTMRGQIAKS*KSGKTKWIIQI
Trigger: GATCTGTATGATCCACTTTGTTTTGCCACTCTTGCAACTCTTGGCAATTTGCCCCCTCATCGTCATACACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483689.1
CDS CCA 72 bp GACGATGAGGGGGCAAATTGCCAAGAGTTGCAAGAGTaGCAAAACAAAGTGGATCATACAGATCCAAAGAGA +
Preference number: 6 (lower is better)
Translates to: DDEGANCQELQE*QNKVDHTDPKR
Trigger: TCTCTTTGGATCTGTATGATCCACTTTGTTTTGCCACTCTTGCAACTCTTGGCAATTTGCCCCCTCATCGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483689.1
CDS TCA 72 bp CTTGTGAATTCCATAGAGGGACAGGAGGGACAATTCTaGCAATTCTCTCAACTTAGTCATGGTGTCCTCAGT +
Preference number: 6 (lower is better)
Translates to: LVNSIEGQEGQF*QFSQLSHGVLS
Trigger: ACTGAGGACACCATGACTAAGTTGAGAGAATTGTCAGAATTGTCCCTCCTGTCCCTCTATGGAATTCACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336375.10
ENST00000351273.11
ENST00000475741.5
ENST00000512463.1
CDS TCA 72 bp TCTCACTCTCAAGTTCTTGAAAACGAGGGCAGTTCCTaGAAGGCAGGTATAGCAACTGAGGATAAGAGAAAA +
Preference number: 6 (lower is better)
Translates to: SHSQVLENEGSS*KAGIATEDKRK
Trigger: TTTTCTCTTATCCTCAGTTGCTATACCTGCCTTTCAGGAACTGCCCTCGTTTTCAAGAACTTGAGAGTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512463.1