RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ACOX3 (Homo sapiens)

Ensembl gene IDs: ENSG00000087008

Ensembl transcript IDs: ENST00000356406.10, ENST00000413009.6, ENST00000503233.5, ENST00000508302.1, ENST00000510365.5, ENST00000512411.5, ENST00000514423.1, ENST00000515797.5

Found 351 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACGGCGCATCAGGTAGACATGATCATCTGCATTTCTTTTCCACGCTaGAAATCACCGCGATCCCAGATTAGTCCAGCCGGCCGGGTGCCT +
Preference number: 1 (lower is better)
Translates to: TAHQVDMIICISFPR*KSPRSQISPAGRVP
Trigger: AGGCACCCGGCCGGCTGGACTAATCTGGGATCGCGGTGATTTGCAGCGTGGAAAAGAAATGCAGATGATCATGTCTACCTGATGCGCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356406.10
3UTR TCA 90 bp CTCAGAAAGCAGCAGCAATCTCCGGCGTGTTCTGGAATCAGAAGTTaGGGTCCACGTCTGATTAGTTCCCTTCGTTTCATTAGACTTGGC +
Preference number: 1 (lower is better)
Translates to: LRKQQQSPACSGIRS*GPRLISSLRFIRLG
Trigger: GCCAAGTCTAATGAAACGAAGGGAACTAATCAGACGTGGACCTCAACTTCTGATTCCAGAACACGCCGGAGATTGCTGCTGCTTTCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
3UTR CAA 90 bp ATTAGTCCAGCCGGCCGGGTGCCTCCCTCCCGTCCGCCTGGGCAGTaGAGGCCAATCAGCAGTTTAGGCGCACAGGTGCGGGCTCAGAAA +
Preference number: 2 (lower is better)
Translates to: ISPAGRVPPSRPPGQ*RPISSLGAQVRAQK
Trigger: TTTCTGAGCCCGCACCTGTGCGCCTAAACTGCTGATTGGCCTCAACTGCCCAGGCGGACGGGAGGGAGGCACCCGGCCGGCTGGACTAAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
3UTR-3UTR GCA 90 bp GCTGCAAATCACCGCGATCCCAGATTAGTCCAGCCGGCCGGGTGCCTCCCTCCCCCCGCTCCAACACCTTaGTTTCCTGCAGGACAGCGC +
Preference number: 2 (lower is better)
Translates to: AANHRDPRLVQPAGCLPPPAPTP*FPAGQR
Trigger: GCGCTGTCCTGCAGGAAAGCAAGGTGTTGGAGCGGG...GGGAGGGAGGCACCCGGCCGGCTGGACTAATCTGGGATCGCGGTGATTTGCAGC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000413009.6
3UTR-3UTR GCA 90 bp CGCTGCAAATCACCGCGATCCCAGATTAGTCCAGCCGGCCGGGTGCCTCCCTCCCTCTGGCCACCAGGATaGCCGCTCCAACACCTTGCT +
Preference number: 2 (lower is better)
Translates to: RCKSPRSQISPAGRVPPSLWPPG*PLQHLA
Trigger: AGCAAGGTGTTGGAGCGGGCATCCTGGTGGCCAGAG...GGAGGGAGGCACCCGGCCGGCTGGACTAATCTGGGATCGCGGTGATTTGCAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413009.6
3UTR-3UTR GCA 90 bp CGATCCCAGATTAGTCCAGCCGGCCGGGTGCCTCCCTCCCGTCCGCCTGGGCAGATTTCTTTTCCACGCTaGAAATCACCGCGATCCCAG +
Preference number: 2 (lower is better)
Translates to: RSQISPAGRVPPSRPPGQISFPR*KSPRSQ
Trigger: CTGGGATCGCGGTGATTTGCAGCGTGGAAAAGAAAT...CTGCCCAGGCGGACGGGAGGGAGGCACCCGGCCGGCTGGACTAATCTGGGATCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
3UTR-3UTR GCA 90 bp TTCCACGCTGCAAATCACCGCGATCCCAGATTAGTCCAGCCGGCCGGGTGCCTCGCTCGCCGTCGGCTCTaGCAATCGGTGAGTCCAGAA +
Preference number: 2 (lower is better)
Translates to: FHAANHRDPRLVQPAGCLARRRL*QSVSPE
Trigger: TTCTGGACTCACCGATTGGCAGAGCCGACGGCGAGC...GAGGCACCCGGCCGGCTGGACTAATCTGGGATCGCGGTGATTTGCAGCGTGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413009.6
3UTR-3UTR GCA 90 bp CCGCGATCCCAGATTAGTCCAGCCGGCCGGGTGCCTCCCTCCCGTCCGCCTGGGGTAGACATGATCATCTaGATTTCTTTTCCACGCTGC +
Preference number: 2 (lower is better)
Translates to: PRSQISPAGRVPPSRPPGVDMII*ISFPRC
Trigger: GCAGCGTGGAAAAGAAATGCAGATGATCATGTCTAC...CCCAGGCGGACGGGAGGGAGGCACCCGGCCGGCTGGACTAATCTGGGATCGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
3UTR-3UTR GCA 90 bp GCCTGGGCAGTTGAGGCCAATCAGCAGTTTAGGCGCACAGGTGCGGGCTCAGAAAACACCTTGCTTTCCTaGAGGACAGCGCCCCAGAGG +
Preference number: 2 (lower is better)
Translates to: AWAVEANQQFRRTGAGSENTLLS*RTAPQR
Trigger: CCTCTGGGGCGCTGTCCTGCAGGAAAGCAAGGTGTT...TTCTGAGCCCGCACCTGTGCGCCTAAACTGCTGATTGGCCTCAACTGCCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413009.6
3UTR-3UTR TCA 90 bp CCGCGATCCCAGATTAGTCCAGCCGGCCGGGTGCCTCCCTCCCGTCCGCCTGGGCTGAACCCTGAAAACTaGATGTGCGAAATTCTAATT +
Preference number: 2 (lower is better)
Translates to: PRSQISPAGRVPPSRPPGLNPEN*MCEILI
Trigger: AATTAGAATTTCGCACATTCAGTTTTCAGGGTTCAG...CCCAGGCGGACGGGAGGGAGGCACCCGGCCGGCTGGACTAATCTGGGATCGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356406.10
3UTR-3UTR TCA 90 bp CCCTCCCGTCCGCCTGGGCAGTTGAGGCCAATCAGCAGTTTAGGCGCACAGGTGGTTGAGGTCCACGTCTaGTTAGTTCCCTTCGTTTCA +
Preference number: 2 (lower is better)
Translates to: PSRPPGQLRPISSLGAQVVEVHV*LVPFVS
Trigger: TGAAACGAAGGGAACTAATCAGACGTGGACCTCAAC...CACCTGTGCGCCTAAACTGCTGATTGGCCTCAACTGCCCAGGCGGACGGGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
3UTR-3UTR TCA 90 bp CGCTGCAAATCACCGCGATCCCAGATTAGTCCAGCCGGCCGGGTGCCTCCCTCCTCTGGAATCAGAAGTTaGGGTCCACGTCTGATTAGT +
Preference number: 2 (lower is better)
Translates to: RCKSPRSQISPAGRVPPSSGIRS*GPRLIS
Trigger: ACTAATCAGACGTGGACCTCAACTTCTGATTCCAGA...GGAGGGAGGCACCCGGCCGGCTGGACTAATCTGGGATCGCGGTGATTTGCAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
3UTR-3UTR TCA 90 bp CAGCAGTTTAGGCGCACAGGTGCGGGCTCAGAAAGCAGCAGCAATCTCCGGCGTGTTGAGGTCCACGTCTaGTTAGTTCCCTTCGTTTCA +
Preference number: 2 (lower is better)
Translates to: QQFRRTGAGSESSSNLRRVEVHV*LVPFVS
Trigger: TGAAACGAAGGGAACTAATCAGACGTGGACCTCAAC...ACGCCGGAGATTGCTGCTGCTTTCTGAGCCCGCACCTGTGCGCCTAAACTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
3UTR-3UTR CCA 90 bp GACATGATCATCTGCATTTCTTTTCCACGCTGCAAATCACCGCGATCCCAGATTTCCCTCCCGTCCGCCTaGGCAGTTGAGGCCAATCAG +
Preference number: 2 (lower is better)
Translates to: DMIICISFPRCKSPRSQISLPSA*AVEANQ
Trigger: CTGATTGGCCTCAACTGCCCAGGCGGACGGGAGGGA...AATCTGGGATCGCGGTGATTTGCAGCGTGGAAAAGAAATGCAGATGATCATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
3UTR-3UTR TCA 90 bp TTGAGGCCAATCAGCAGTTTAGGCGCACAGGTGCGGGCTCAGAAAGCAGCAGCATCTGGAATCAGAAGTTaGGGTCCACGTCTGATTAGT +
Preference number: 2 (lower is better)
Translates to: LRPISSLGAQVRAQKAAASGIRS*GPRLIS
Trigger: ACTAATCAGACGTGGACCTCAACTTCTGATTCCAGA...TGCTGCTGCTTTCTGAGCCCGCACCTGTGCGCCTAAACTGCTGATTGGCCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
3UTR-3UTR TCA 90 bp TTTAGGCGCACAGGTGCGGGCTCAGAAAGCAGCAGCAATCTCCGGCGTGTTCTGATTTCAGACTTCCTATaGCAGGTTTGTTCACAGAAA +
Preference number: 2 (lower is better)
Translates to: FRRTGAGSESSSNLRRVLISDFL*QVCSQK
Trigger: TTTCTGTGAACAAACCTGTCATAGGAAGTCTGAAAT...CAGAACACGCCGGAGATTGCTGCTGCTTTCTGAGCCCGCACCTGTGCGCCTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413009.6
3UTR-3UTR GCA 90 bp TTGACAAAGAACCAGACTGGCATCATTGACTTCTCAATGAAGTGGAGCTCGGTAATTTCTTTTCCACGCTaGAAATCACCGCGATCCCAG +
Preference number: 2 (lower is better)
Translates to: LTKNQTGIIDFSMKWSSVISFPR*KSPRSQ
Trigger: CTGGGATCGCGGTGATTTGCAGCGTGGAAAAGAAAT...TACCGAGCTCCACTTCATTGAGAAGTCAATGATGCCAGTCTGGTTCTTTGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356406.10
3UTR-3UTR CCA 90 bp AACAGATGTTCCTCCTTAAGTCTTAAACCACGACATTCAGATGATCTATGTGCAATCTCCGGCGTGTTCTaGAATCAGAAGTTGAGGTCC +
Preference number: 2 (lower is better)
Translates to: NRCSSLSLKPRHSDDLCAISGVF*NQKLRS
Trigger: GGACCTCAACTTCTGATTCCAGAACACGCCGGAGAT...TGCACATAGATCATCTGAATGTCGTGGTTTAAGACTTAAGGAGGAACATCTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356406.10
3UTR-3UTR CAA 90 bp TCCCAGATTAGTCCAGCCGGCCGGGTGCCTCCCTCCCGTCCGCCTGGGCAGTTGCGTCCGCCTGGGCAGTaGAGGCCAATCAGCAGTTTA +
Preference number: 3 (lower is better)
Translates to: SQISPAGRVPPSRPPGQLRPPGQ*RPISSL
Trigger: TAAACTGCTGATTGGCCTCAACTGCCCAGGCGGACG...CAACTGCCCAGGCGGACGGGAGGGAGGCACCCGGCCGGCTGGACTAATCTGGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
3UTR-3UTR CAA 90 bp CGATCCCAGATTAGTCCAGCCGGCCGGGTGCCTCCCTCCCGTCCGCCTGGGCAGTTCGTTTCATTAGACTaGGCTGAATGTGTGCCAGTC +
Preference number: 3 (lower is better)
Translates to: RSQISPAGRVPPSRPPGQFVSLD*AECVPV
Trigger: GACTGGCACACATTCAGCCAAGTCTAATGAAACGAA...CTGCCCAGGCGGACGGGAGGGAGGCACCCGGCCGGCTGGACTAATCTGGGATCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
3UTR-3UTR CAA 90 bp AGACATGATCATCTGCATTTCTTTTCCACGCTGCAAATCACCGCGATCCCAGATGCCCGCTCCAACACCTaGCTTTCCTGCAGGACAGCG +
Preference number: 3 (lower is better)
Translates to: RHDHLHFFSTLQITAIPDARSNT*LSCRTA
Trigger: CGCTGTCCTGCAGGAAAGCAAGGTGTTGGAGCGGGC...ATCTGGGATCGCGGTGATTTGCAGCGTGGAAAAGAAATGCAGATGATCATGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413009.6
3UTR-3UTR CAA 90 bp GCCAATCAGCAGTTTAGGCGCACAGGTGCGGGCTCAGAAAGCAGCAGCAATCTCTTCGTTTCATTAGACTaGGCTGAATGTGTGCCAGTC +
Preference number: 3 (lower is better)
Translates to: ANQQFRRTGAGSESSSNLFVSLD*AECVPV
Trigger: GACTGGCACACATTCAGCCAAGTCTAATGAAACGAA...GAGATTGCTGCTGCTTTCTGAGCCCGCACCTGTGCGCCTAAACTGCTGATTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
3UTR TCA 72 bp CAGCAGCAATCTCCGGCGTGTTCTGGAATCAGAAGTTaGGGTCCACGTCTGATTAGTTCCCTTCGTTTCATT +
Preference number: 3 (lower is better)
Translates to: QQQSPACSGIRS*GPRLISSLRFI
Trigger: AATGAAACGAAGGGAACTAATCAGACGTGGACCTCAACTTCTGATTCCAGAACACGCCGGAGATTGCTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
3UTR TCA 72 bp AATGGGCTGTTTACTTTAGAGAAAGGAGCTGAACCCTaGAAACTGAATGTGCGAAATTCTAATTATCAAAAA +
Preference number: 3 (lower is better)
Translates to: NGLFTLEKGAEP*KLNVRNSNYQK
Trigger: TTTTTGATAATTAGAATTTCGCACATTCAGTTTTCAGGGTTCAGCTCCTTTCTCTAAAGTAAACAGCCCATT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356406.10
CDS-3UTR GCA 90 bp CCGCGATCCCAGATTAGTCCAGCCGGCCGGGTGCCTCCCTCCCGTCCGCCTGGGACGAGGCCAGGGGCTTaGTGGCCGATGCCAGGGCGT +
Preference number: 4 (lower is better)
Translates to: PRSQISPAGRVPPSRPPGTRPGA*WPMPGR
Trigger: ACGCCCTGGCATCGGCCAGCAAGCCCCTGGCCTCGT...CCCAGGCGGACGGGAGGGAGGCACCCGGCCGGCTGGACTAATCTGGGATCGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
3UTR CAA 72 bp GCCGGCCGGGTGCCTCCCTCCCGTCCGCCTGGGCAGTaGAGGCCAATCAGCAGTTTAGGCGCACAGGTGCGG +
Preference number: 4 (lower is better)
Translates to: AGRVPPSRPPGQ*RPISSLGAQVR
Trigger: CCGCACCTGTGCGCCTAAACTGCTGATTGGCCTCAACTGCCCAGGCGGACGGGAGGGAGGCACCCGGCCGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR TCA 90 bp GCCGGCCGGGTGCCTCCCTCCCGTCCGCCTGGGCAGTTGAGGCCAATCAGCAGTCTGACGCCGAGTGGCTaGGAAGCGAAGAGCGATGGC +
Preference number: 4 (lower is better)
Translates to: AGRVPPSRPPGQLRPISSLTPSG*EAKSDG
Trigger: GCCATCGCTCTTCGCTTCTCAGCCACTCGGCGTCAG...ACTGCTGATTGGCCTCAACTGCCCAGGCGGACGGGAGGGAGGCACCCGGCCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR GCA 90 bp GCCGGCCGGGTGCCTCCCTCCCGTCCGCCTGGGCAGTTGAGGCCAATCAGCAGTCTGCCTGTCTGGCGCTaGGGTCTCCCGATGCAAGTC +
Preference number: 4 (lower is better)
Translates to: AGRVPPSRPPGQLRPISSLPVWR*GLPMQV
Trigger: GACTTGCATCGGGAGACCGCAGCGCCAGACAGGCAG...ACTGCTGATTGGCCTCAACTGCCCAGGCGGACGGGAGGGAGGCACCCGGCCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp CGCGATCCCAGATTAGTCCAGCCGGCCGGGTGCCTCCCTCCCGTCCGCCTGGGCAAGGGATGCAGCCCATaGCACTGGTCCCCTGGCACA +
Preference number: 4 (lower is better)
Translates to: RDPRLVQPAGCLPPVRLGKGCSP*HWSPGT
Trigger: TGTGCCAGGGGACCAGTGCCATGGGCTGCATCCCTT...GCCCAGGCGGACGGGAGGGAGGCACCCGGCCGGCTGGACTAATCTGGGATCGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp GCCGGCCGGGTGCCTCCCTCCCGTCCGCCTGGGCAGTTGAGGCCAATCAGCAGTAAGGGATGCAGCCCATaGCACTGGTCCCCTGGCACA +
Preference number: 4 (lower is better)
Translates to: AGRVPPSRPPGQLRPISSKGCSP*HWSPGT
Trigger: TGTGCCAGGGGACCAGTGCCATGGGCTGCATCCCTT...ACTGCTGATTGGCCTCAACTGCCCAGGCGGACGGGAGGGAGGCACCCGGCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR TCA 90 bp CGCTGCAAATCACCGCGATCCCAGATTAGTCCAGCCGGCCGGGTGCCTCCCTCCAGGTGCCCTCGGGGGTaGCGTCTCCCATCCGGTTCA +
Preference number: 4 (lower is better)
Translates to: RCKSPRSQISPAGRVPPSRCPRG*RLPSGS
Trigger: TGAACCGGATGGGAGACGTCACCCCCGAGGGCACCT...GGAGGGAGGCACCCGGCCGGCTGGACTAATCTGGGATCGCGGTGATTTGCAGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR GCA 90 bp CCGCGATCCCAGATTAGTCCAGCCGGCCGGGTGCCTCCCTCCCGTCCGCCTGGGTGCACGATAAAGGGATaGAGCCCATGGCACTGGTCC +
Preference number: 4 (lower is better)
Translates to: PRSQISPAGRVPPSRPPGCTIKG*SPWHWS
Trigger: GGACCAGTGCCATGGGCTGCATCCCTTTATCGTGCA...CCCAGGCGGACGGGAGGGAGGCACCCGGCCGGCTGGACTAATCTGGGATCGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR GCA 90 bp CGATCCCAGATTAGTCCAGCCGGCCGGGTGCCTCCCTCCCGTCCGCCTGGGCAGCAGCCACTTGTATGCTaGCAGGGCGACTGCAGAGTC +
Preference number: 4 (lower is better)
Translates to: RSQISPAGRVPPSRPPGQQPLVC*QGDCRV
Trigger: GACTCTGCAGTCGCCCTGGCAGCATACAAGTGGCTG...CTGCCCAGGCGGACGGGAGGGAGGCACCCGGCCGGCTGGACTAATCTGGGATCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp CGCGATCCCAGATTAGTCCAGCCGGCCGGGTGCCTCCCTCCCGTCCGCCTGGGCCGGTTCAGAAGGCTCTaGCGAGGAACTCTGACCTTG +
Preference number: 4 (lower is better)
Translates to: RDPRLVQPAGCLPPVRLGRFRRL*RGTLTL
Trigger: CAAGGTCAGAGTTCCTCGCCAGAGCCTTCTGAACCG...GCCCAGGCGGACGGGAGGGAGGCACCCGGCCGGCTGGACTAATCTGGGATCGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR TCA 90 bp CCCTCCCGTCCGCCTGGGCAGTTGAGGCCAATCAGCAGTTTAGGCGCACAGGTGAGGTGCCCTCGGGGGTaGCGTCTCCCATCCGGTTCA +
Preference number: 4 (lower is better)
Translates to: PSRPPGQLRPISSLGAQVRCPRG*RLPSGS
Trigger: TGAACCGGATGGGAGACGTCACCCCCGAGGGCACCT...CACCTGTGCGCCTAAACTGCTGATTGGCCTCAACTGCCCAGGCGGACGGGAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR TCA 90 bp GTGCCTCCCTCCCGTCCGCCTGGGCAGTTGAGGCCAATCAGCAGTTTAGGCGCAACCTCTGGACCACCGTaGGCTCCACGAAGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: VPPSRPPGQLRPISSLGATSGPP*APRRPA
Trigger: CGCTGGCCTTCGTGGAGCTCACGGTGGTCCAGAGGT...TGCGCCTAAACTGCTGATTGGCCTCAACTGCCCAGGCGGACGGGAGGGAGGCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp GCTGCAAATCACCGCGATCCCAGATTAGTCCAGCCGGCCGGGTGCCTCCCTCCCCAAGCTCTGCCTGTCTaGCGCTGCGGTCTCCCGATG +
Preference number: 4 (lower is better)
Translates to: AANHRDPRLVQPAGCLPPQALPV*RCGLPM
Trigger: CATCGGGAGACCGCAGCGCCAGACAGGCAGAGCTTG...GGGAGGGAGGCACCCGGCCGGCTGGACTAATCTGGGATCGCGGTGATTTGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp CCGCGATCCCAGATTAGTCCAGCCGGCCGGGTGCCTCCCTCCCGTCCGCCTGGGGCATCGTCTTTCAGCTaGGAACACAAAGCCAGGACG +
Preference number: 4 (lower is better)
Translates to: PRSQISPAGRVPPSRPPGASSFS*EHKART
Trigger: CGTCCTGGCTTTGTGTTCCCAGCTGAAAGACGATGC...CCCAGGCGGACGGGAGGGAGGCACCCGGCCGGCTGGACTAATCTGGGATCGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356406.10
CDS-3UTR GCA 90 bp CGCGATCCCAGATTAGTCCAGCCGGCCGGGTGCCTCCCTCCCGTCCGCCTGGGCCGTAGTGGGCAGTTGTaGGAATGGCCTTGGTATTAC +
Preference number: 4 (lower is better)
Translates to: RDPRLVQPAGCLPPVRLGRSGQL*EWPWYY
Trigger: GTAATACCAAGGCCATTCGCACAACTGCCCACTACG...GCCCAGGCGGACGGGAGGGAGGCACCCGGCCGGCTGGACTAATCTGGGATCGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR GCA 90 bp CCCTCCCGTCCGCCTGGGCAGTTGAGGCCAATCAGCAGTTTAGGCGCACAGGTGCTGCCTGTCTGGCGCTaGGGTCTCCCGATGCAAGTC +
Preference number: 4 (lower is better)
Translates to: PSRPPGQLRPISSLGAQVLPVWR*GLPMQV
Trigger: GACTTGCATCGGGAGACCGCAGCGCCAGACAGGCAG...CACCTGTGCGCCTAAACTGCTGATTGGCCTCAACTGCCCAGGCGGACGGGAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR GCA 90 bp GCTGCAAATCACCGCGATCCCAGATTAGTCCAGCCGGCCGGGTGCCTCCCTCCCGCTCGCCGTCGGCTCTaGCAATCGGTGAGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: AANHRDPRLVQPAGCLPPARRRL*QSVSPE
Trigger: TTCTGGACTCACCGATTGGCAGAGCCGACGGCGAGC...GGGAGGGAGGCACCCGGCCGGCTGGACTAATCTGGGATCGCGGTGATTTGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR GCA 90 bp CGCTGCAAATCACCGCGATCCCAGATTAGTCCAGCCGGCCGGGTGCCTCCCTCCCCCGCTCCAACACCTTaGTTTCCTGCAGGACAGCGC +
Preference number: 4 (lower is better)
Translates to: RCKSPRSQISPAGRVPPSPAPTP*FPAGQR
Trigger: GCGCTGTCCTGCAGGAAAGCAAGGTGTTGGAGCGGG...GGAGGGAGGCACCCGGCCGGCTGGACTAATCTGGGATCGCGGTGATTTGCAGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp TCCCAGATTAGTCCAGCCGGCCGGGTGCCTCCCTCCCGTCCGCCTGGGCAGTTGCGCCTCCTTCCACAGTaGATGCCATCGCGTGATAAG +
Preference number: 4 (lower is better)
Translates to: SQISPAGRVPPSRPPGQLRLLPQ*MPSRDK
Trigger: CTTATCACGCGATGGCATCCACTGTGGAAGGAGGCG...CAACTGCCCAGGCGGACGGGAGGGAGGCACCCGGCCGGCTGGACTAATCTGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp TCCCGTCCGCCTGGGCAGTTGAGGCCAATCAGCAGTTTAGGCGCACAGGTGCGGTGCAGCCCATGGCACTaGTCCCCTGGCACACACAGC +
Preference number: 4 (lower is better)
Translates to: SRPPGQLRPISSLGAQVRCSPWH*SPGTHS
Trigger: GCTGTGTGTGCCAGGGGACCAGTGCCATGGGCTGCA...CCGCACCTGTGCGCCTAAACTGCTGATTGGCCTCAACTGCCCAGGCGGACGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp CCTGCAGGACAGCGCCCCAGAGGTTTTTGTAGAGCTCGCCGTCGGCTCTGCCAAGGCGGCACGGAAGGCTaGTGCACGTGCTCGTGGAAC +
Preference number: 4 (lower is better)
Translates to: PAGQRPRGFCRARRRLCQGGTEG*CTCSWN
Trigger: GTTCCACGAGCACGTGCACCAGCCTTCCGTGCCGCC...TTGGCAGAGCCGACGGCGAGCTCTACAAAAACCTCTGGGGCGCTGTCCTGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413009.6
CDS-3UTR CCA 90 bp TCCCGTCCGCCTGGGCAGTTGAGGCCAATCAGCAGTTTAGGCGCACAGGTGCGGTCCCTCCCGTCCGCCTaGGCAGTTGAGGCCAATCAG +
Preference number: 4 (lower is better)
Translates to: SRPPGQLRPISSLGAQVRSLPSA*AVEANQ
Trigger: CTGATTGGCCTCAACTGCCCAGGCGGACGGGAGGGA...CCGCACCTGTGCGCCTAAACTGCTGATTGGCCTCAACTGCCCAGGCGGACGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR TCA 90 bp AAATCACCGCGATCCCAGATTAGTCCAGCCGGCCGGGTGCCTCCCTCCCGTCCGTACATGCCCAGGCACTaGATCAAGGCGGGGACCTTC +
Preference number: 4 (lower is better)
Translates to: KSPRSQISPAGRVPPSRPYMPRH*IKAGTF
Trigger: GAAGGTCCCCGCCTTGATTCAGTGCCTGGGCATGTA...CGGACGGGAGGGAGGCACCCGGCCGGCTGGACTAATCTGGGATCGCGGTGATTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR TCA 90 bp TCCGCCTGGGCAGTTGAGGCCAATCAGCAGTTTAGGCGCACAGGTGCGGGCTCACTGACGCCGAGTGGCTaGGAAGCGAAGAGCGATGGC +
Preference number: 4 (lower is better)
Translates to: SAWAVEANQQFRRTGAGSLTPSG*EAKSDG
Trigger: GCCATCGCTCTTCGCTTCTCAGCCACTCGGCGTCAG...TGAGCCCGCACCTGTGCGCCTAAACTGCTGATTGGCCTCAACTGCCCAGGCGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR GCA 90 bp CCGCCTGGGCAGTTGAGGCCAATCAGCAGTTTAGGCGCACAGGTGCGGGCTCAGGCTCGCCGTCGGCTCTaGCAATCGGTGAGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: PPGQLRPISSLGAQVRAQARRRL*QSVSPE
Trigger: TTCTGGACTCACCGATTGGCAGAGCCGACGGCGAGC...CTGAGCCCGCACCTGTGCGCCTAAACTGCTGATTGGCCTCAACTGCCCAGGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp GGCGCACAGGTGCGGGCTCAGAAAGCAGCAGCAATCTCCGGCGTGTTCTGGAATTGGCCAGGCTCACGATaGAGACCCGGCCCGAGGACA +
Preference number: 4 (lower is better)
Translates to: GAQVRAQKAAAISGVFWNWPGSR*RPGPRT
Trigger: TGTCCTCGGGCCGGGTCTCCATCGTGAGCCTGGCCA...ATTCCAGAACACGCCGGAGATTGCTGCTGCTTTCTGAGCCCGCACCTGTGCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp GCCTGGGCAGTTGAGGCCAATCAGCAGTTTAGGCGCACAGGTGCGGGCTCAGAATGGCCAGGCTCACGATaGAGACCCGGCCCGAGGACA +
Preference number: 4 (lower is better)
Translates to: AWAVEANQQFRRTGAGSEWPGSR*RPGPRT
Trigger: TGTCCTCGGGCCGGGTCTCCATCGTGAGCCTGGCCA...TTCTGAGCCCGCACCTGTGCGCCTAAACTGCTGATTGGCCTCAACTGCCCAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp TCCCGTCCGCCTGGGCAGTTGAGGCCAATCAGCAGTTTAGGCGCACAGGTGCGGTGCTCGTGGAACCTCTaGACCACCGTGAGCTCCACG +
Preference number: 4 (lower is better)
Translates to: SRPPGQLRPISSLGAQVRCSWNL*TTVSST
Trigger: CGTGGAGCTCACGGTGGTCCAGAGGTTCCACGAGCA...CCGCACCTGTGCGCCTAAACTGCTGATTGGCCTCAACTGCCCAGGCGGACGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp GCCGGCCGGGTGCCTCCCTCCCGTCCGCCTGGGCAGTTGAGGCCAATCAGCAGTATCTCCGGCGTGTTCTaGAATCAGAAGTTGAGGTCC +
Preference number: 4 (lower is better)
Translates to: AGRVPPSRPPGQLRPISSISGVF*NQKLRS
Trigger: GGACCTCAACTTCTGATTCCAGAACACGCCGGAGAT...ACTGCTGATTGGCCTCAACTGCCCAGGCGGACGGGAGGGAGGCACCCGGCCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR TCA 90 bp CCGCCTGGGCAGTTGAGGCCAATCAGCAGTTTAGGCGCACAGGTGCGGGCTCAGTCTGTGGGTCCAAACTaGCGCCGAGTGGCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: PPGQLRPISSLGAQVRAQSVGPN*RRVAEK
Trigger: CTTCTCAGCCACTCGGCGTCAGTTTGGACCCACAGA...CTGAGCCCGCACCTGTGCGCCTAAACTGCTGATTGGCCTCAACTGCCCAGGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR TCA 90 bp CGCTGCAAATCACCGCGATCCCAGATTAGTCCAGCCGGCCGGGTGCCTCCCTCCGTCCAGAAAGTCCACTaGCTTCAGCGGACTGCGGAA +
Preference number: 4 (lower is better)
Translates to: RCKSPRSQISPAGRVPPSVQKVH*LQRTAE
Trigger: TTCCGCAGTCCGCTGAAGTCAGTGGACTTTCTGGAC...GGAGGGAGGCACCCGGCCGGCTGGACTAATCTGGGATCGCGGTGATTTGCAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR TCA 90 bp AAATCACCGCGATCCCAGATTAGTCCAGCCGGCCGGGTGCCTCCCTCCCGTCCGGGCTCTGCCAATCGGTaGGTCCAGAACAAAGTCAGG +
Preference number: 4 (lower is better)
Translates to: KSPRSQISPAGRVPPSRPGSANR*VQNKVR
Trigger: CCTGACTTTGTTCTGGACTCACCGATTGGCAGAGCC...CGGACGGGAGGGAGGCACCCGGCCGGCTGGACTAATCTGGGATCGCGGTGATTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR TCA 90 bp CGCGATCCCAGATTAGTCCAGCCGGCCGGGTGCCTCCCTCCCGTCCGCCTGGGCTCTGGAATCAGAAGTTaGGGTCCACGTCTGATTAGT +
Preference number: 4 (lower is better)
Translates to: RDPRLVQPAGCLPPVRLGSGIRS*GPRLIS
Trigger: ACTAATCAGACGTGGACCTCAACTTCTGATTCCAGA...GCCCAGGCGGACGGGAGGGAGGCACCCGGCCGGCTGGACTAATCTGGGATCGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR GCA 90 bp AGCAGTTTAGGCGCACAGGTGCGGGCTCAGAAAGCAGCAGCAATCTCCGGCGTGCTCACGTCCAAGCTCTaGCTGTCTGGCGCTGCGGTC +
Preference number: 4 (lower is better)
Translates to: SSLGAQVRAQKAAAISGVLTSKL*LSGAAV
Trigger: GACCGCAGCGCCAGACAGGCAGAGCTTGGACGTGAG...CACGCCGGAGATTGCTGCTGCTTTCTGAGCCCGCACCTGTGCGCCTAAACTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR GCA 90 bp TTTAGGCGCACAGGTGCGGGCTCAGAAAGCAGCAGCAATCTCCGGCGTGTTCTGGGGCTTGCTGGCCGATaGCAGGGCGTGGATCTCACG +
Preference number: 4 (lower is better)
Translates to: FRRTGAGSESSSNLRRVLGLAGR*QGVDLT
Trigger: CGTGAGATCCACGCCCTGGCATCGGCCAGCAAGCCC...CAGAACACGCCGGAGATTGCTGCTGCTTTCTGAGCCCGCACCTGTGCGCCTAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR GCA 90 bp CCGCCTGGGCAGTTGAGGCCAATCAGCAGTTTAGGCGCACAGGTGCGGGCTCAGCAGCCACTTGTATGCTaGCAGGGCGACTGCAGAGTC +
Preference number: 4 (lower is better)
Translates to: PPGQLRPISSLGAQVRAQQPLVC*QGDCRV
Trigger: GACTCTGCAGTCGCCCTGGCAGCATACAAGTGGCTG...CTGAGCCCGCACCTGTGCGCCTAAACTGCTGATTGGCCTCAACTGCCCAGGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR GCA 90 bp CCCTCCCGTCCGCCTGGGCAGTTGAGGCCAATCAGCAGTTTAGGCGCACAGGTGAACACCTTGCTTTCCTaGAGGACAGCGCCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: PSRPPGQLRPISSLGAQVNTLLS*RTAPQR
Trigger: CCTCTGGGGCGCTGTCCTGCAGGAAAGCAAGGTGTT...CACCTGTGCGCCTAAACTGCTGATTGGCCTCAACTGCCCAGGCGGACGGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR GCA 90 bp TTCCACGCTGCAAATCACCGCGATCCCAGATTAGTCCAGCCGGCCGGGTGCCTCCCCGCTCCAACACCTTaGTTTCCTGCAGGACAGCGC +
Preference number: 4 (lower is better)
Translates to: FHAANHRDPRLVQPAGCLPAPTP*FPAGQR
Trigger: GCGCTGTCCTGCAGGAAAGCAAGGTGTTGGAGCGGG...GAGGCACCCGGCCGGCTGGACTAATCTGGGATCGCGGTGATTTGCAGCGTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp CCCTCCCGTCCGCCTGGGCAGTTGAGGCCAATCAGCAGTTTAGGCGCACAGGTGACACCACCGCGTGAGTaGCTGTCTTGCCCATGTTGC +
Preference number: 4 (lower is better)
Translates to: PSRPPGQLRPISSLGAQVTPPRE*LSCPCC
Trigger: GCAACATGGGCAAGACAGCCACTCACGCGGTGGTGT...CACCTGTGCGCCTAAACTGCTGATTGGCCTCAACTGCCCAGGCGGACGGGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp CGCTGCAAATCACCGCGATCCCAGATTAGTCCAGCCGGCCGGGTGCCTCCCTCCCAAACTGACGCCGAGTaGCTGAGAAGCGAAGAGCGA +
Preference number: 4 (lower is better)
Translates to: RCKSPRSQISPAGRVPPSQTDAE*LRSEER
Trigger: TCGCTCTTCGCTTCTCAGCCACTCGGCGTCAGTTTG...GGAGGGAGGCACCCGGCCGGCTGGACTAATCTGGGATCGCGGTGATTTGCAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp CAGCAGTTTAGGCGCACAGGTGCGGGCTCAGAAAGCAGCAGCAATCTCCGGCGTGCTCCATCGTGGACCTaGTGTGCCAGGAGACCCAGC +
Preference number: 4 (lower is better)
Translates to: QQFRRTGAGSESSSNLRRAPSWT*CARRPS
Trigger: GCTGGGTCTCCTGGCACACCAGGTCCACGATGGAGC...ACGCCGGAGATTGCTGCTGCTTTCTGAGCCCGCACCTGTGCGCCTAAACTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp CGCTGCAAATCACCGCGATCCCAGATTAGTCCAGCCGGCCGGGTGCCTCCCTCCCGGCCGTGGGACACCTaGCATTTGTTCCTTGCTTCA +
Preference number: 4 (lower is better)
Translates to: RCKSPRSQISPAGRVPPSRPWDT*HLFLAS
Trigger: TGAAGCAAGGAACAAATGCCAGGTGTCCCACGGCCG...GGAGGGAGGCACCCGGCCGGCTGGACTAATCTGGGATCGCGGTGATTTGCAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR TCA 90 bp TTCCACGCTGCAAATCACCGCGATCCCAGATTAGTCCAGCCGGCCGGGTGCCTCTACATGCCCAGGCACTaGATCAAGGCGGGGACCTTC +
Preference number: 4 (lower is better)
Translates to: FHAANHRDPRLVQPAGCLYMPRH*IKAGTF
Trigger: GAAGGTCCCCGCCTTGATTCAGTGCCTGGGCATGTA...GAGGCACCCGGCCGGCTGGACTAATCTGGGATCGCGGTGATTTGCAGCGTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR GCA 90 bp CGCTGCAAATCACCGCGATCCCAGATTAGTCCAGCCGGCCGGGTGCCTCCCTCCCCACAGTTCAACCCCTaGCAGGGAAACCAAAAGCAG +
Preference number: 4 (lower is better)
Translates to: RCKSPRSQISPAGRVPPSPQFNP*QGNQKQ
Trigger: CTGCTTTTGGTTTCCCTGGCAGGGGTTGAACTGTGG...GGAGGGAGGCACCCGGCCGGCTGGACTAATCTGGGATCGCGGTGATTTGCAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR GCA 90 bp CCGCCTGGGCAGTTGAGGCCAATCAGCAGTTTAGGCGCACAGGTGCGGGCTCAGAACCAGCCACTTGTATaGTGCCAGGGCGACTGCAGA +
Preference number: 4 (lower is better)
Translates to: PPGQLRPISSLGAQVRAQNQPLV*CQGDCR
Trigger: TCTGCAGTCGCCCTGGCAGCATACAAGTGGCTGGTT...CTGAGCCCGCACCTGTGCGCCTAAACTGCTGATTGGCCTCAACTGCCCAGGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR GCA 90 bp GGCGCACAGGTGCGGGCTCAGAAAGCAGCAGCAATCTCCGGCGTGTTCTGGAATGAAGGCTGGTGCACGTaGTCGTGGAACCTCTGGACC +
Preference number: 4 (lower is better)
Translates to: GAQVRAQKAAAISGVFWNEGWCT*SWNLWT
Trigger: GGTCCAGAGGTTCCACGAGCACGTGCACCAGCCTTC...ATTCCAGAACACGCCGGAGATTGCTGCTGCTTTCTGAGCCCGCACCTGTGCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp CCCTCCCGTCCGCCTGGGCAGTTGAGGCCAATCAGCAGTTTAGGCGCACAGGTGCGCCTCCTTCCACAGTaGATGCCATCGCGTGATAAG +
Preference number: 4 (lower is better)
Translates to: PSRPPGQLRPISSLGAQVRLLPQ*MPSRDK
Trigger: CTTATCACGCGATGGCATCCACTGTGGAAGGAGGCG...CACCTGTGCGCCTAAACTGCTGATTGGCCTCAACTGCCCAGGCGGACGGGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp TTTAGGCGCACAGGTGCGGGCTCAGAAAGCAGCAGCAATCTCCGGCGTGTTCTGCATCGAGGGGCCCCCTaGGGAATTCTGGGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: FRRTGAGSESSSNLRRVLHRGAP*GILGAE
Trigger: CTCTGCTCCCAGAATTCCCCAGGGGGCCCCTCGATG...CAGAACACGCCGGAGATTGCTGCTGCTTTCTGAGCCCGCACCTGTGCGCCTAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp AAATCACCGCGATCCCAGATTAGTCCAGCCGGCCGGGTGCCTCCCTCCCGTCCGGGGCAGTTGTGCGAATaGCCTTGGTATTACTGCCGT +
Preference number: 4 (lower is better)
Translates to: KSPRSQISPAGRVPPSRPGQLCE*PWYYCR
Trigger: ACGGCAGTAATACCAAGGCCATTCGCACAACTGCCC...CGGACGGGAGGGAGGCACCCGGCCGGCTGGACTAATCTGGGATCGCGGTGATTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp AAATCACCGCGATCCCAGATTAGTCCAGCCGGCCGGGTGCCTCCCTCCCGTCCGATGGCACTGGTCCCCTaGCACACACAGCTTAGCAAA +
Preference number: 4 (lower is better)
Translates to: KSPRSQISPAGRVPPSRPMALVP*HTQLSK
Trigger: TTTGCTAAGCTGTGTGTGCCAGGGGACCAGTGCCAT...CGGACGGGAGGGAGGCACCCGGCCGGCTGGACTAATCTGGGATCGCGGTGATTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp CCCTCCCGTCCGCCTGGGCAGTTGAGGCCAATCAGCAGTTTAGGCGCACAGGTGAGAAGCGAAGAGCGATaGCCACGGCCAGCTTTAGGT +
Preference number: 4 (lower is better)
Translates to: PSRPPGQLRPISSLGAQVRSEER*PRPALG
Trigger: ACCTAAAGCTGGCCGTGGCCATCGCTCTTCGCTTCT...CACCTGTGCGCCTAAACTGCTGATTGGCCTCAACTGCCCAGGCGGACGGGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp TCCCGTCCGCCTGGGCAGTTGAGGCCAATCAGCAGTTTAGGCGCACAGGTGCGGTTTCCTCCTCCTCTGTaGGTCCAAACTGACGCCGAG +
Preference number: 4 (lower is better)
Translates to: SRPPGQLRPISSLGAQVRFPPPL*VQTDAE
Trigger: CTCGGCGTCAGTTTGGACCCACAGAGGAGGAGGAAA...CCGCACCTGTGCGCCTAAACTGCTGATTGGCCTCAACTGCCCAGGCGGACGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp CAGCAGTTTAGGCGCACAGGTGCGGGCTCAGAAAGCAGCAGCAATCTCCGGCGTGAATTCCTTGCTGGGTaGTCCACGAGGCCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: QQFRRTGAGSESSSNLRREFLAG*STRPGA
Trigger: AGCCCCTGGCCTCGTGGACCACCCAGCAAGGAATTC...ACGCCGGAGATTGCTGCTGCTTTCTGAGCCCGCACCTGTGCGCCTAAACTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp GGCGCACAGGTGCGGGCTCAGAAAGCAGCAGCAATCTCCGGCGTGTTCTGGAATGCCAACGGACGGCCGTaGGACACCTGGCATTTGTTC +
Preference number: 4 (lower is better)
Translates to: GAQVRAQKAAAISGVFWNANGRP*DTWHLF
Trigger: GAACAAATGCCAGGTGTCCCACGGCCGTCCGTTGGC...ATTCCAGAACACGCCGGAGATTGCTGCTGCTTTCTGAGCCCGCACCTGTGCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp GCCTGGGCAGTTGAGGCCAATCAGCAGTTTAGGCGCACAGGTGCGGGCTCAGAATGGTGCACGTGCTCGTaGAACCTCTGGACCACCGTG +
Preference number: 4 (lower is better)
Translates to: AWAVEANQQFRRTGAGSEWCTCS*NLWTTV
Trigger: CACGGTGGTCCAGAGGTTCCACGAGCACGTGCACCA...TTCTGAGCCCGCACCTGTGCGCCTAAACTGCTGATTGGCCTCAACTGCCCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp ATCAGCAGTTTAGGCGCACAGGTGCGGGCTCAGAAAGCAGCAGCAATCTCCGGCTCCCTCCCGTCCGCCTaGGCAGTTGAGGCCAATCAG +
Preference number: 4 (lower is better)
Translates to: ISSLGAQVRAQKAAAISGSLPSA*AVEANQ
Trigger: CTGATTGGCCTCAACTGCCCAGGCGGACGGGAGGGA...GCCGGAGATTGCTGCTGCTTTCTGAGCCCGCACCTGTGCGCCTAAACTGCTGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR TCA 90 bp CCGCGATCCCAGATTAGTCCAGCCGGCCGGGTGCCTCCCTCCCGTCCGCCTGGGTTTAGAGAAAGGAGCTaGACCCTGAAAACTGAATGT +
Preference number: 4 (lower is better)
Translates to: PRSQISPAGRVPPSRPPGFRERS*TLKTEC
Trigger: ACATTCAGTTTTCAGGGTTCAGCTCCTTTCTCTAAA...CCCAGGCGGACGGGAGGGAGGCACCCGGCCGGCTGGACTAATCTGGGATCGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356406.10
CDS-3UTR GCA 90 bp CCTCCCTCCCGTCCGCCTGGGCAGTTGAGGCCAATCAGCAGTTTAGGCGCACAGCGTGAGTGGCTGTCTTaGCCATGTTGCCAACCCAAA +
Preference number: 4 (lower is better)
Translates to: PPSRPPGQLRPISSLGAQREWLS*PCCQPK
Trigger: TTTGGGTTGGCAACATGGGCAAGACAGCCACTCACG...CTGTGCGCCTAAACTGCTGATTGGCCTCAACTGCCCAGGCGGACGGGAGGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR GCA 90 bp GGCGCACAGGTGCGGGCTCAGAAAGCAGCAGCAATCTCCGGCGTGTTCTGGAATGACGCTCCAAAGCGCTaGCTGACGTCCTTAAAGGGG +
Preference number: 4 (lower is better)
Translates to: GAQVRAQKAAAISGVFWNDAPKR*LTSLKG
Trigger: CCCCTTTAAGGACGTCAGGCAGCGCTTTGGAGCGTC...ATTCCAGAACACGCCGGAGATTGCTGCTGCTTTCTGAGCCCGCACCTGTGCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR GCA 90 bp GTGCGGGCTCAGAAAGCAGCAGCAATCTCCGGCGTGTTCTGGAATCAGAAGTTGGGGCTTGCTGGCCGATaGCAGGGCGTGGATCTCACG +
Preference number: 4 (lower is better)
Translates to: VRAQKAAAISGVFWNQKLGLAGR*QGVDLT
Trigger: CGTGAGATCCACGCCCTGGCATCGGCCAGCAAGCCC...CAACTTCTGATTCCAGAACACGCCGGAGATTGCTGCTGCTTTCTGAGCCCGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR GCA 90 bp GCTCAGAAAGCAGCAGCAATCTCCGGCGTGTTCTGGAATCAGAAGTTGAGGTCCACGAGGCCAGGGGCTTaGTGGCCGATGCCAGGGCGT +
Preference number: 4 (lower is better)
Translates to: AQKAAAISGVFWNQKLRSTRPGA*WPMPGR
Trigger: ACGCCCTGGCATCGGCCAGCAAGCCCCTGGCCTCGT...GGACCTCAACTTCTGATTCCAGAACACGCCGGAGATTGCTGCTGCTTTCTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR GCA 90 bp GTGCCTCCCTCCCGTCCGCCTGGGCAGTTGAGGCCAATCAGCAGTTTAGGCGCAATCGTGGACCTGGTGTaGCAGGAGACCCAGCAAATA +
Preference number: 4 (lower is better)
Translates to: VPPSRPPGQLRPISSLGAIVDLV*QETQQI
Trigger: TATTTGCTGGGTCTCCTGGCACACCAGGTCCACGAT...TGCGCCTAAACTGCTGATTGGCCTCAACTGCCCAGGCGGACGGGAGGGAGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR GCA 90 bp CCTCCCTCCCGTCCGCCTGGGCAGTTGAGGCCAATCAGCAGTTTAGGCGCACAGATCGTGGACCTGGTGTaGCAGGAGACCCAGCAAATA +
Preference number: 4 (lower is better)
Translates to: PPSRPPGQLRPISSLGAQIVDLV*QETQQI
Trigger: TATTTGCTGGGTCTCCTGGCACACCAGGTCCACGAT...CTGTGCGCCTAAACTGCTGATTGGCCTCAACTGCCCAGGCGGACGGGAGGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR GCA 90 bp TGCCCGCTCCAACACCTTGCTTTCCTGCAGGACAGCGCCCCAGAGGTTTTTGTAGGCACGGAAGGCTGGTaGACGTGCTCGTGGAACCTC +
Preference number: 4 (lower is better)
Translates to: CPLQHLAFLQDSAPEVFVGTEGW*TCSWNL
Trigger: GAGGTTCCACGAGCACGTGCACCAGCCTTCCGTGCC...TACAAAAACCTCTGGGGCGCTGTCCTGCAGGAAAGCAAGGTGTTGGAGCGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413009.6
CDS-3UTR GCA 90 bp GTGCCTCCCTCCCGTCCGCCTGGGCAGTTGAGGCCAATCAGCAGTTTAGGCGCAAACACTTCTCCCGCCTaGTCACCGGAGAAGTATCCT +
Preference number: 4 (lower is better)
Translates to: VPPSRPPGQLRPISSLGANTSPA*SPEKYP
Trigger: AGGATACTTCTCCGGTGAGCAGGCGGGAGAAGTGTT...TGCGCCTAAACTGCTGATTGGCCTCAACTGCCCAGGCGGACGGGAGGGAGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356406.10
CDS-3UTR GCA 90 bp TGGGCAGTTGAGGCCAATCAGCAGTTTAGGCGCACAGGTGCGGGCTCAGAAAGCCTCTGGCCACCAGGATaGCCGCTCCAACACCTTGCT +
Preference number: 4 (lower is better)
Translates to: WAVEANQQFRRTGAGSESLWPPG*PLQHLA
Trigger: AGCAAGGTGTTGGAGCGGGCATCCTGGTGGCCAGAG...GCTTTCTGAGCCCGCACCTGTGCGCCTAAACTGCTGATTGGCCTCAACTGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp AAATCACCGCGATCCCAGATTAGTCCAGCCGGCCGGGTGCCTCCCTCCCGTCCGTGCCAACCCAAAACTTaGCAGCTTCGAAATCAGGGG +
Preference number: 4 (lower is better)
Translates to: KSPRSQISPAGRVPPSRPCQPKT*QLRNQG
Trigger: CCCCTGATTTCGAAGCTGCCAAGTTTTGGGTTGGCA...CGGACGGGAGGGAGGCACCCGGCCGGCTGGACTAATCTGGGATCGCGGTGATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp TTCCACGCTGCAAATCACCGCGATCCCAGATTAGTCCAGCCGGCCGGGTGCCTCTTTCCTCCTCCTCTGTaGGTCCAAACTGACGCCGAG +
Preference number: 4 (lower is better)
Translates to: FHAANHRDPRLVQPAGCLFPPPL*VQTDAE
Trigger: CTCGGCGTCAGTTTGGACCCACAGAGGAGGAGGAAA...GAGGCACCCGGCCGGCTGGACTAATCTGGGATCGCGGTGATTTGCAGCGTGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp CGCTGCAAATCACCGCGATCCCAGATTAGTCCAGCCGGCCGGGTGCCTCCCTCCCCAGGAAGAGCGACTTaGAGAAATGGTCTAAGGCGT +
Preference number: 4 (lower is better)
Translates to: RCKSPRSQISPAGRVPPSPGRAT*RNGLRR
Trigger: ACGCCTTAGACCATTTCTCCAAGTCGCTCTTCCTGG...GGAGGGAGGCACCCGGCCGGCTGGACTAATCTGGGATCGCGGTGATTTGCAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp ATCAGCAGTTTAGGCGCACAGGTGCGGGCTCAGAAAGCAGCAGCAATCTCCGGCGATGCAAGTCCTCGCTaGAGCTCCACCAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: ISSLGAQVRAQKAAAISGDASPR*SSTRSR
Trigger: CCTGGACCTGGTGGAGCTCCAGCGAGGACTTGCATC...GCCGGAGATTGCTGCTGCTTTCTGAGCCCGCACCTGTGCGCCTAAACTGCTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp ATCAGCAGTTTAGGCGCACAGGTGCGGGCTCAGAAAGCAGCAGCAATCTCCGGCGCCGATGCCAGGGCGTaGATCTCACGTCCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: ISSLGAQVRAQKAAAISGADARA*ISRPSS
Trigger: AGAGCTTGGACGTGAGATCCACGCCCTGGCATCGGC...GCCGGAGATTGCTGCTGCTTTCTGAGCCCGCACCTGTGCGCCTAAACTGCTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR TCA 90 bp TTGAGGCCAATCAGCAGTTTAGGCGCACAGGTGCGGGCTCAGAAAGCAGCAGCAGCCTCCCGGCATTCCTaGATTCCTTGCTGGGTGGTC +
Preference number: 4 (lower is better)
Translates to: LRPISSLGAQVRAQKAAAASRHS*IPCWVV
Trigger: GACCACCCAGCAAGGAATTCAGGAATGCCGGGAGGC...TGCTGCTGCTTTCTGAGCCCGCACCTGTGCGCCTAAACTGCTGATTGGCCTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR GCA 90 bp CGCTGCAAATCACCGCGATCCCAGATTAGTCCAGCCGGCCGGGTGCCTCCCTCCGAGAAGAGTCATACATaGCCAGGCACTGAATCAAGG +
Preference number: 4 (lower is better)
Translates to: RCKSPRSQISPAGRVPPSEKSHT*PGTESR
Trigger: CCTTGATTCAGTGCCTGGGCATGTATGACTCTTCTC...GGAGGGAGGCACCCGGCCGGCTGGACTAATCTGGGATCGCGGTGATTTGCAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR GCA 90 bp TCCGCCTGGGCAGTTGAGGCCAATCAGCAGTTTAGGCGCACAGGTGCGGGCTCACGTGAGTGGCTGTCTTaGCCATGTTGCCAACCCAAA +
Preference number: 4 (lower is better)
Translates to: SAWAVEANQQFRRTGAGSREWLS*PCCQPK
Trigger: TTTGGGTTGGCAACATGGGCAAGACAGCCACTCACG...TGAGCCCGCACCTGTGCGCCTAAACTGCTGATTGGCCTCAACTGCCCAGGCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR GCA 90 bp GCCTGGGCAGTTGAGGCCAATCAGCAGTTTAGGCGCACAGGTGCGGGCTCAGAATGCACGATAAAGGGATaGAGCCCATGGCACTGGTCC +
Preference number: 4 (lower is better)
Translates to: AWAVEANQQFRRTGAGSECTIKG*SPWHWS
Trigger: GGACCAGTGCCATGGGCTGCATCCCTTTATCGTGCA...TTCTGAGCCCGCACCTGTGCGCCTAAACTGCTGATTGGCCTCAACTGCCCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR GCA 90 bp TTTAGGCGCACAGGTGCGGGCTCAGAAAGCAGCAGCAATCTCCGGCGTGTTCTGGACGCTCCAAAGCGCTaGCTGACGTCCTTAAAGGGG +
Preference number: 4 (lower is better)
Translates to: FRRTGAGSESSSNLRRVLDAPKR*LTSLKG
Trigger: CCCCTTTAAGGACGTCAGGCAGCGCTTTGGAGCGTC...CAGAACACGCCGGAGATTGCTGCTGCTTTCTGAGCCCGCACCTGTGCGCCTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR GCA 90 bp GCCAATCAGCAGTTTAGGCGCACAGGTGCGGGCTCAGAAAGCAGCAGCAATCTCGAAGGCTGGTGCACGTaGTCGTGGAACCTCTGGACC +
Preference number: 4 (lower is better)
Translates to: ANQQFRRTGAGSESSSNLEGWCT*SWNLWT
Trigger: GGTCCAGAGGTTCCACGAGCACGTGCACCAGCCTTC...GAGATTGCTGCTGCTTTCTGAGCCCGCACCTGTGCGCCTAAACTGCTGATTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR GCA 90 bp CGCTGCAAATCACCGCGATCCCAGATTAGTCCAGCCGGCCGGGTGCCTCCCTCCATTTCTTTTCCACGCTaGAAATCACCGCGATCCCAG +
Preference number: 4 (lower is better)
Translates to: RCKSPRSQISPAGRVPPSISFPR*KSPRSQ
Trigger: CTGGGATCGCGGTGATTTGCAGCGTGGAAAAGAAAT...GGAGGGAGGCACCCGGCCGGCTGGACTAATCTGGGATCGCGGTGATTTGCAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp CCTCCCTCCCGTCCGCCTGGGCAGTTGAGGCCAATCAGCAGTTTAGGCGCACAGCCAAAAACCAAGCTATaGAGGAGGTACTTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: PPSRPPGQLRPISSLGAQPKTKL*RRYLAA
Trigger: GGCTGCCAAGTACCTCCTCCATAGCTTGGTTTTTGG...CTGTGCGCCTAAACTGCTGATTGGCCTCAACTGCCCAGGCGGACGGGAGGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp AGGTGCGGGCTCAGAAAGCAGCAGCAATCTCCGGCGTGTTCTGGAATCAGAAGTTGCAGCCCATGGCACTaGTCCCCTGGCACACACAGC +
Preference number: 4 (lower is better)
Translates to: RCGLRKQQQSPACSGIRSCSPWH*SPGTHS
Trigger: GCTGTGTGTGCCAGGGGACCAGTGCCATGGGCTGCA...ACTTCTGATTCCAGAACACGCCGGAGATTGCTGCTGCTTTCTGAGCCCGCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp CCTGCAGGACAGCGCCCCAGAGGTTTTTGTAGAGCTCGCCGTCGGCTCTGCCAAGACAGCTGCCAGATATaGAAGCAAGCGCCATTGCTG +
Preference number: 4 (lower is better)
Translates to: PAGQRPRGFCRARRRLCQDSCQI*KQAPLL
Trigger: CAGCAATGGCGCTTGCTTCCATATCTGGCAGCTGTC...TTGGCAGAGCCGACGGCGAGCTCTACAAAAACCTCTGGGGCGCTGTCCTGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413009.6
CDS-3UTR CCA 90 bp CAACACCTTGCTTTCCTGCAGGACAGCGCCCCAGAGGTTTTTGTAGAGCTCGCCGCCAACGGACGGCCGTaGGACACCTGGCATTTGTTC +
Preference number: 4 (lower is better)
Translates to: QHLAFLQDSAPEVFVELAANGRP*DTWHLF
Trigger: GAACAAATGCCAGGTGTCCCACGGCCGTCCGTTGGC...GGCGAGCTCTACAAAAACCTCTGGGGCGCTGTCCTGCAGGAAAGCAAGGTGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413009.6
CDS-3UTR CCA 90 bp TTGAGGCCAATCAGCAGTTTAGGCGCACAGGTGCGGGCTCAGAAAGCAGCAGCATGGTGCACGTGCTCGTaGAACCTCTGGACCACCGTG +
Preference number: 4 (lower is better)
Translates to: LRPISSLGAQVRAQKAAAWCTCS*NLWTTV
Trigger: CACGGTGGTCCAGAGGTTCCACGAGCACGTGCACCA...TGCTGCTGCTTTCTGAGCCCGCACCTGTGCGCCTAAACTGCTGATTGGCCTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR GCA 90 bp GTGCGGGCTCAGAAAGCAGCAGCAATCTCCGGCGTGTTCTGGAATCAGAAGTTGGCTGAAGGACGCTCTTaGTCGGTAGGCATCGAGGGG +
Preference number: 4 (lower is better)
Translates to: VRAQKAAAISGVFWNQKLAEGRS*SVGIEG
Trigger: CCCCTCGATGCCTACCGAGCAAGAGCGTCCTTCAGC...CAACTTCTGATTCCAGAACACGCCGGAGATTGCTGCTGCTTTCTGAGCCCGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR GCA 90 bp CCGCCTGGGCAGTTGAGGCCAATCAGCAGTTTAGGCGCACAGGTGCGGGCTCAGACTCGAAGATCCGCTTaGATCGAAGGAAGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: PPGQLRPISSLGAQVRAQTRRSA*IEGSSA
Trigger: AGCTGAACTTCCTTCGATGCAAGCGGATCTTCGAGT...CTGAGCCCGCACCTGTGCGCCTAAACTGCTGATTGGCCTCAACTGCCCAGGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR GCA 90 bp GGCTCAGAAAGCAGCAGCAATCTCCGGCGTGTTCTGGAATCAGAAGTTGAGGTCGCTGCGGTCTCCCGATaGAAGTCCTCGCTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: GSESSSNLRRVLESEVEVAAVSR*KSSLEL
Trigger: GAGCTCCAGCGAGGACTTGCATCGGGAGACCGCAGC...GACCTCAACTTCTGATTCCAGAACACGCCGGAGATTGCTGCTGCTTTCTGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp GCTCAGAAAGCAGCAGCAATCTCCGGCGTGTTCTGGAATCAGAAGTTGAGGTCCCCCCCTGGGGAATTCTaGGAGCAGAGCTGTGTCGCC +
Preference number: 4 (lower is better)
Translates to: AQKAAAISGVFWNQKLRSPPGEF*EQSCVA
Trigger: GGCGACACAGCTCTGCTCCCAGAATTCCCCAGGGGG...GGACCTCAACTTCTGATTCCAGAACACGCCGGAGATTGCTGCTGCTTTCTGAGC
58% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp ATCAGCAGTTTAGGCGCACAGGTGCGGGCTCAGAAAGCAGCAGCAATCTCCGGCCAAACTGACGCCGAGTaGCTGAGAAGCGAAGAGCGA +
Preference number: 4 (lower is better)
Translates to: ISSLGAQVRAQKAAAISGQTDAE*LRSEER
Trigger: TCGCTCTTCGCTTCTCAGCCACTCGGCGTCAGTTTG...GCCGGAGATTGCTGCTGCTTTCTGAGCCCGCACCTGTGCGCCTAAACTGCTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp TCCGCCTGGGCAGTTGAGGCCAATCAGCAGTTTAGGCGCACAGGTGCGGGCTCAAGCAGTCGGCAACACTaGAGACCTCAAACTTCTGGT +
Preference number: 4 (lower is better)
Translates to: SAWAVEANQQFRRTGAGSSSRQH*RPQTSG
Trigger: ACCAGAAGTTTGAGGTCTCCAGTGTTGCCGACTGCT...TGAGCCCGCACCTGTGCGCCTAAACTGCTGATTGGCCTCAACTGCCCAGGCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp TCAGAAAGCAGCAGCAATCTCCGGCGTGTTCTGGAATCAGAAGTTGAGGTCCACGGCGGCACGGAAGGCTaGTGCACGTGCTCGTGGAAC +
Preference number: 4 (lower is better)
Translates to: SESSSNLRRVLESEVEVHGGTEG*CTCSWN
Trigger: GTTCCACGAGCACGTGCACCAGCCTTCCGTGCCGCC...GTGGACCTCAACTTCTGATTCCAGAACACGCCGGAGATTGCTGCTGCTTTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR TCA 90 bp TCCCGTCCGCCTGGGCAGTTGAGGCCAATCAGCAGTTTAGGCGCACAGGTGCGGACATGTCTTCGACACTaGGGAAGTCATACTCGAAGA +
Preference number: 4 (lower is better)
Translates to: SRPPGQLRPISSLGAQVRTCLRH*GSHTRR
Trigger: TCTTCGAGTATGACTTCCTCAGTGTCGAAGACATGT...CCGCACCTGTGCGCCTAAACTGCTGATTGGCCTCAACTGCCCAGGCGGACGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR TCA 90 bp GCCAATCAGCAGTTTAGGCGCACAGGTGCGGGCTCAGAAAGCAGCAGCAATCTCGTCCAGAAAGTCCACTaGCTTCAGCGGACTGCGGAA +
Preference number: 4 (lower is better)
Translates to: ANQQFRRTGAGSESSSNLVQKVH*LQRTAE
Trigger: TTCCGCAGTCCGCTGAAGTCAGTGGACTTTCTGGAC...GAGATTGCTGCTGCTTTCTGAGCCCGCACCTGTGCGCCTAAACTGCTGATTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR TCA 90 bp TGCCCGCTCCAACACCTTGCTTTCCTGCAGGACAGCGCCCCAGAGGTTTTTGTAGGCTCTGCCAATCGGTaGGTCCAGAACAAAGTCAGG +
Preference number: 4 (lower is better)
Translates to: CPLQHLAFLQDSAPEVFVGSANR*VQNKVR
Trigger: CCTGACTTTGTTCTGGACTCACCGATTGGCAGAGCC...TACAAAAACCTCTGGGGCGCTGTCCTGCAGGAAAGCAAGGTGTTGGAGCGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413009.6
CDS-3UTR TCA 90 bp TTTAGGCGCACAGGTGCGGGCTCAGAAAGCAGCAGCAATCTCCGGCGTGTTCTGAAGCCGAGGGAGAGTTaGCAAAGAACCAGACTGGCA +
Preference number: 4 (lower is better)
Translates to: FRRTGAGSESSSNLRRVLKPRES*QRTRLA
Trigger: TGCCAGTCTGGTTCTTTGTCAACTCTCCCTCGGCTT...CAGAACACGCCGGAGATTGCTGCTGCTTTCTGAGCCCGCACCTGTGCGCCTAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356406.10
CDS-3UTR GCA 90 bp TCCGCCTGGGCAGTTGAGGCCAATCAGCAGTTTAGGCGCACAGGTGCGGGCTCAGAGAAGAGTCATACATaGCCAGGCACTGAATCAAGG +
Preference number: 4 (lower is better)
Translates to: SAWAVEANQQFRRTGAGSEKSHT*PGTESR
Trigger: CCTTGATTCAGTGCCTGGGCATGTATGACTCTTCTC...TGAGCCCGCACCTGTGCGCCTAAACTGCTGATTGGCCTCAACTGCCCAGGCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR GCA 90 bp TTCCACGCTGCAAATCACCGCGATCCCAGATTAGTCCAGCCGGCCGGGTGCCTCTGGCCTTGGTATTACTaGCGTGGCTTAATTCGGTCA +
Preference number: 4 (lower is better)
Translates to: FHAANHRDPRLVQPAGCLWPWYY*RGLIRS
Trigger: TGACCGAATTAAGCCACGGCAGTAATACCAAGGCCA...GAGGCACCCGGCCGGCTGGACTAATCTGGGATCGCGGTGATTTGCAGCGTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR GCA 90 bp CCGCCTGGGCAGTTGAGGCCAATCAGCAGTTTAGGCGCACAGGTGCGGGCTCAGCTGGCATTTGTTCCTTaGTTCAAAGTCACTGCTTCC +
Preference number: 4 (lower is better)
Translates to: PPGQLRPISSLGAQVRAQLAFVP*FKVTAS
Trigger: GGAAGCAGTGACTTTGAAGCAAGGAACAAATGCCAG...CTGAGCCCGCACCTGTGCGCCTAAACTGCTGATTGGCCTCAACTGCCCAGGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR GCA 90 bp TCAGAAAGCAGCAGCAATCTCCGGCGTGTTCTGGAATCAGAAGTTGAGGTCCACGGCACGGAAGGCTGGTaGACGTGCTCGTGGAACCTC +
Preference number: 4 (lower is better)
Translates to: SESSSNLRRVLESEVEVHGTEGW*TCSWNL
Trigger: GAGGTTCCACGAGCACGTGCACCAGCCTTCCGTGCC...GTGGACCTCAACTTCTGATTCCAGAACACGCCGGAGATTGCTGCTGCTTTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR GCA 90 bp GCTCAGAAAGCAGCAGCAATCTCCGGCGTGTTCTGGAATCAGAAGTTGAGGTCCCTCTGGCCACCAGGATaGCCGCTCCAACACCTTGCT +
Preference number: 4 (lower is better)
Translates to: AQKAAAISGVFWNQKLRSLWPPG*PLQHLA
Trigger: AGCAAGGTGTTGGAGCGGGCATCCTGGTGGCCAGAG...GGACCTCAACTTCTGATTCCAGAACACGCCGGAGATTGCTGCTGCTTTCTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR GCA 90 bp GCTGCAAATCACCGCGATCCCAGATTAGTCCAGCCGGCCGGGTGCCTCCCTCCCGTAGACATGATCATCTaGATTTCTTTTCCACGCTGC +
Preference number: 4 (lower is better)
Translates to: AANHRDPRLVQPAGCLPPVDMII*ISFPRC
Trigger: GCAGCGTGGAAAAGAAATGCAGATGATCATGTCTAC...GGGAGGGAGGCACCCGGCCGGCTGGACTAATCTGGGATCGCGGTGATTTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp TTCCACGCTGCAAATCACCGCGATCCCAGATTAGTCCAGCCGGCCGGGTGCCTCTTGTGCGAATGGCCTTaGTATTACTGCCGTGGCTTA +
Preference number: 4 (lower is better)
Translates to: FHAANHRDPRLVQPAGCLLCEWP*YYCRGL
Trigger: TAAGCCACGGCAGTAATACCAAGGCCATTCGCACAA...GAGGCACCCGGCCGGCTGGACTAATCTGGGATCGCGGTGATTTGCAGCGTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp GCCAATCAGCAGTTTAGGCGCACAGGTGCGGGCTCAGAAAGCAGCAGCAATCTCCGGTTCAGAAGGCTCTaGCGAGGAACTCTGACCTTG +
Preference number: 4 (lower is better)
Translates to: ANQQFRRTGAGSESSSNLRFRRL*RGTLTL
Trigger: CAAGGTCAGAGTTCCTCGCCAGAGCCTTCTGAACCG...GAGATTGCTGCTGCTTTCTGAGCCCGCACCTGTGCGCCTAAACTGCTGATTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp GTGCCTCCCTCCCGTCCGCCTGGGCAGTTGAGGCCAATCAGCAGTTTAGGCGCATGGATACTCAAGCACTaGTATTTCCTCCTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: VPPSRPPGQLRPISSLGAWILKH*YFLLLC
Trigger: ACAGAGGAGGAGGAAATACCAGTGCTTGAGTATCCA...TGCGCCTAAACTGCTGATTGGCCTCAACTGCCCAGGCGGACGGGAGGGAGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp CAGACTTCCTATGACAGGTTTGTTCACAGAAAACTCTGGCCACCAGGATGCCCGGCTCCATCGTGGACCTaGTGTGCCAGGAGACCCAGC +
Preference number: 4 (lower is better)
Translates to: QTSYDRFVHRKLWPPGCPAPSWT*CARRPS
Trigger: GCTGGGTCTCCTGGCACACCAGGTCCACGATGGAGC...CGGGCATCCTGGTGGCCAGAGTTTTCTGTGAACAAACCTGTCATAGGAAGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413009.6
CDS-3UTR CCA 90 bp GGCTCAGAAAGCAGCAGCAATCTCCGGCGTGTTCTGGAATCAGAAGTTGAGGTCTGCTCGTGGAACCTCTaGACCACCGTGAGCTCCACG +
Preference number: 4 (lower is better)
Translates to: GSESSSNLRRVLESEVEVCSWNL*TTVSST
Trigger: CGTGGAGCTCACGGTGGTCCAGAGGTTCCACGAGCA...GACCTCAACTTCTGATTCCAGAACACGCCGGAGATTGCTGCTGCTTTCTGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp CAGCAGTTTAGGCGCACAGGTGCGGGCTCAGAAAGCAGCAGCAATCTCCGGCGTATCTCCGGCGTGTTCTaGAATCAGAAGTTGAGGTCC +
Preference number: 4 (lower is better)
Translates to: QQFRRTGAGSESSSNLRRISGVF*NQKLRS
Trigger: GGACCTCAACTTCTGATTCCAGAACACGCCGGAGAT...ACGCCGGAGATTGCTGCTGCTTTCTGAGCCCGCACCTGTGCGCCTAAACTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR GCA 90 bp GCCTGGGCAGTTGAGGCCAATCAGCAGTTTAGGCGCACAGGTGCGGGCTCAGAAACTCGAAGATCCGCTTaGATCGAAGGAAGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: AWAVEANQQFRRTGAGSETRRSA*IEGSSA
Trigger: AGCTGAACTTCCTTCGATGCAAGCGGATCTTCGAGT...TTCTGAGCCCGCACCTGTGCGCCTAAACTGCTGATTGGCCTCAACTGCCCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR GCA 90 bp TCCGCCTGGGCAGTTGAGGCCAATCAGCAGTTTAGGCGCACAGGTGCGGGCTCATGTCACCTTCGTATGTaGAGTTGGGATCGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: SAWAVEANQQFRRTGAGSCHLRM*SWDRCH
Trigger: ATGACAACGATCCCAACTGCACATACGAAGGTGACA...TGAGCCCGCACCTGTGCGCCTAAACTGCTGATTGGCCTCAACTGCCCAGGCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR GCA 90 bp GTGCGGGCTCAGAAAGCAGCAGCAATCTCCGGCGTGTTCTGGAATCAGAAGTTGCTGACTTCAGCGGACTaGGGAAGCAAGCTCCATCGT +
Preference number: 4 (lower is better)
Translates to: VRAQKAAAISGVFWNQKLLTSAD*GSKLHR
Trigger: ACGATGGAGCTTGCTTCCGCAGTCCGCTGAAGTCAG...CAACTTCTGATTCCAGAACACGCCGGAGATTGCTGCTGCTTTCTGAGCCCGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR GCA 90 bp GCCAATCAGCAGTTTAGGCGCACAGGTGCGGGCTCAGAAAGCAGCAGCAATCTCACTTCTGGTCAAGGATaGCGGGATAGGCGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: ANQQFRRTGAGSESSSNLTSGQG*RDRRPE
Trigger: TTCTGGACGCCTATCCCGGCATCCTTGACCAGAAGT...GAGATTGCTGCTGCTTTCTGAGCCCGCACCTGTGCGCCTAAACTGCTGATTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp TTTAGGCGCACAGGTGCGGGCTCAGAAAGCAGCAGCAATCTCCGGCGTGTTCTGCCAAAAACCAAGCTATaGAGGAGGTACTTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: FRRTGAGSESSSNLRRVLPKTKL*RRYLAA
Trigger: GGCTGCCAAGTACCTCCTCCATAGCTTGGTTTTTGG...CAGAACACGCCGGAGATTGCTGCTGCTTTCTGAGCCCGCACCTGTGCGCCTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp TCCGCCTGGGCAGTTGAGGCCAATCAGCAGTTTAGGCGCACAGGTGCGGGCTCAGGAACTCTGACCTTGTaGAACATGGCGAAACCATTA +
Preference number: 4 (lower is better)
Translates to: SAWAVEANQQFRRTGAGSGTLTL*NMAKPL
Trigger: TAATGGTTTCGCCATGTTCCACAAGGTCAGAGTTCC...TGAGCCCGCACCTGTGCGCCTAAACTGCTGATTGGCCTCAACTGCCCAGGCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp GGCGCACAGGTGCGGGCTCAGAAAGCAGCAGCAATCTCCGGCGTGTTCTGGAATGCGCCATTGCTGCATTaGATACTCAAGCACTGGTAT +
Preference number: 4 (lower is better)
Translates to: GAQVRAQKAAAISGVFWNAPLLH*ILKHWY
Trigger: ATACCAGTGCTTGAGTATCCAATGCAGCAATGGCGC...ATTCCAGAACACGCCGGAGATTGCTGCTGCTTTCTGAGCCCGCACCTGTGCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp TGGGCAGTTGAGGCCAATCAGCAGTTTAGGCGCACAGGTGCGGGCTCAGAAAGCCCAGGAAGAGCGACTTaGAGAAATGGTCTAAGGCGT +
Preference number: 4 (lower is better)
Translates to: WAVEANQQFRRTGAGSESPGRAT*RNGLRR
Trigger: ACGCCTTAGACCATTTCTCCAAGTCGCTCTTCCTGG...GCTTTCTGAGCCCGCACCTGTGCGCCTAAACTGCTGATTGGCCTCAACTGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp TCAGAAAGCAGCAGCAATCTCCGGCGTGTTCTGGAATCAGAAGTTGAGGTCCACGCCGATGCCAGGGCGTaGATCTCACGTCCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: SESSSNLRRVLESEVEVHADARA*ISRPSS
Trigger: AGAGCTTGGACGTGAGATCCACGCCCTGGCATCGGC...GTGGACCTCAACTTCTGATTCCAGAACACGCCGGAGATTGCTGCTGCTTTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp GACATGATCATCTGCATTTCTTTTCCACGCTGCAAATCACCGCGATCCCAGATTAGGCCAGGGGCTTGCTaGCCGATGCCAGGGCGTGGA +
Preference number: 4 (lower is better)
Translates to: DMIICISFPRCKSPRSQIRPGAC*PMPGRG
Trigger: TCCACGCCCTGGCATCGGCCAGCAAGCCCCTGGCCT...AATCTGGGATCGCGGTGATTTGCAGCGTGGAAAAGAAATGCAGATGATCATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR TCA 90 bp GGAGAGTTGACAAAGAACCAGACTGGCATCATTGACTTCTCAATGAAGTGGAGCACCTCTGGACCACCGTaGGCTCCACGAAGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: GELTKNQTGIIDFSMKWSTSGPP*APRRPA
Trigger: CGCTGGCCTTCGTGGAGCTCACGGTGGTCCAGAGGT...GCTCCACTTCATTGAGAAGTCAATGATGCCAGTCTGGTTCTTTGTCAACTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356406.10
CDS-3UTR TCA 90 bp TTTAGGCGCACAGGTGCGGGCTCAGAAAGCAGCAGCAATCTCCGGCGTGTTCTGGTTGAGGTCCACGTCTaGTTAGTTCCCTTCGTTTCA +
Preference number: 4 (lower is better)
Translates to: FRRTGAGSESSSNLRRVLVEVHV*LVPFVS
Trigger: TGAAACGAAGGGAACTAATCAGACGTGGACCTCAAC...CAGAACACGCCGGAGATTGCTGCTGCTTTCTGAGCCCGCACCTGTGCGCCTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR TCA 90 bp TCTTTTCCACGCTGCAAATCACCGCGATCCCAGATTAGTCCAGCCGGCCGGGTGGTTGAGGTCCACGTCTaGTTAGTTCCCTTCGTTTCA +
Preference number: 4 (lower is better)
Translates to: SFPRCKSPRSQISPAGRVVEVHV*LVPFVS
Trigger: TGAAACGAAGGGAACTAATCAGACGTGGACCTCAAC...CACCCGGCCGGCTGGACTAATCTGGGATCGCGGTGATTTGCAGCGTGGAAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR GCA 90 bp GCCAATCAGCAGTTTAGGCGCACAGGTGCGGGCTCAGAAAGCAGCAGCAATCTCCGTAGTGGGCAGTTGTaGGAATGGCCTTGGTATTAC +
Preference number: 4 (lower is better)
Translates to: ANQQFRRTGAGSESSSNLRSGQL*EWPWYY
Trigger: GTAATACCAAGGCCATTCGCACAACTGCCCACTACG...GAGATTGCTGCTGCTTTCTGAGCCCGCACCTGTGCGCCTAAACTGCTGATTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp GCCGAGGGAGAGTTGACAAAGAACCAGACTGGCATCATTGACTTCTCAATGAAGCCCCCTGGGGAATTCTaGGAGCAGAGCTGTGTCGCC +
Preference number: 4 (lower is better)
Translates to: AEGELTKNQTGIIDFSMKPPGEF*EQSCVA
Trigger: GGCGACACAGCTCTGCTCCCAGAATTCCCCAGGGGG...CTTCATTGAGAAGTCAATGATGCCAGTCTGGTTCTTTGTCAACTCTCCCTCGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356406.10
CDS-3UTR CCA 90 bp GTGCGGGCTCAGAAAGCAGCAGCAATCTCCGGCGTGTTCTGGAATCAGAAGTTGGACAGCTGCCAGATATaGAAGCAAGCGCCATTGCTG +
Preference number: 4 (lower is better)
Translates to: VRAQKAAAISGVFWNQKLDSCQI*KQAPLL
Trigger: CAGCAATGGCGCTTGCTTCCATATCTGGCAGCTGTC...CAACTTCTGATTCCAGAACACGCCGGAGATTGCTGCTGCTTTCTGAGCCCGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp CAGACTTCCTATGACAGGTTTGTTCACAGAAAACTCTGGCCACCAGGATGCCCGCACCCAACCGGTTCATaGCCAGATAGCCGTGTCCTC +
Preference number: 4 (lower is better)
Translates to: QTSYDRFVHRKLWPPGCPHPTGS*PDSRVL
Trigger: GAGGACACGGCTATCTGGCCATGAACCGGTTGGGTG...CGGGCATCCTGGTGGCCAGAGTTTTCTGTGAACAAACCTGTCATAGGAAGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413009.6
CDS-3UTR CCA 90 bp TGCCCGCTCCAACACCTTGCTTTCCTGCAGGACAGCGCCCCAGAGGTTTTTGTAAGCAGTCGGCAACACTaGAGACCTCAAACTTCTGGT +
Preference number: 4 (lower is better)
Translates to: CPLQHLAFLQDSAPEVFVSSRQH*RPQTSG
Trigger: ACCAGAAGTTTGAGGTCTCCAGTGTTGCCGACTGCT...TACAAAAACCTCTGGGGCGCTGTCCTGCAGGAAAGCAAGGTGTTGGAGCGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413009.6
CDS-3UTR TCA 90 bp TCAGAAAGCAGCAGCAATCTCCGGCGTGTTCTGGAATCAGAAGTTGAGGTCCACTCTGGCGAGGAACTCTaGCCTTGTGGAACATGGCGA +
Preference number: 4 (lower is better)
Translates to: SESSSNLRRVLESEVEVHSGEEL*PCGTWR
Trigger: TCGCCATGTTCCACAAGGTCAGAGTTCCTCGCCAGA...GTGGACCTCAACTTCTGATTCCAGAACACGCCGGAGATTGCTGCTGCTTTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR TCA 90 bp ATCTGCATTTCTTTTCCACGCTGCAAATCACCGCGATCCCAGATTAGTCCAGCCTCTGTGGGTCCAAACTaGCGCCGAGTGGCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: ICISFPRCKSPRSQISPASVGPN*RRVAEK
Trigger: CTTCTCAGCCACTCGGCGTCAGTTTGGACCCACAGA...GGCTGGACTAATCTGGGATCGCGGTGATTTGCAGCGTGGAAAAGAAATGCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR TCA 90 bp GCCGAGGGAGAGTTGACAAAGAACCAGACTGGCATCATTGACTTCTCAATGAAGGCCTCCCGGCATTCCTaGATTCCTTGCTGGGTGGTC +
Preference number: 4 (lower is better)
Translates to: AEGELTKNQTGIIDFSMKASRHS*IPCWVV
Trigger: GACCACCCAGCAAGGAATTCAGGAATGCCGGGAGGC...CTTCATTGAGAAGTCAATGATGCCAGTCTGGTTCTTTGTCAACTCTCCCTCGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356406.10
CDS-3UTR TCA 90 bp TGGGCAGTTGAGGCCAATCAGCAGTTTAGGCGCACAGGTGCGGGCTCAGAAAGCTCTGGAATCAGAAGTTaGGGTCCACGTCTGATTAGT +
Preference number: 4 (lower is better)
Translates to: WAVEANQQFRRTGAGSESSGIRS*GPRLIS
Trigger: ACTAATCAGACGTGGACCTCAACTTCTGATTCCAGA...GCTTTCTGAGCCCGCACCTGTGCGCCTAAACTGCTGATTGGCCTCAACTGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR GCA 90 bp TCAGAAAGCAGCAGCAATCTCCGGCGTGTTCTGGAATCAGAAGTTGAGGTCCACAACCAGCCACTTGTATaGTGCCAGGGCGACTGCAGA +
Preference number: 4 (lower is better)
Translates to: SESSSNLRRVLESEVEVHNQPLV*CQGDCR
Trigger: TCTGCAGTCGCCCTGGCAGCATACAAGTGGCTGGTT...GTGGACCTCAACTTCTGATTCCAGAACACGCCGGAGATTGCTGCTGCTTTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR GCA 90 bp TGGGCAGTTGAGGCCAATCAGCAGTTTAGGCGCACAGGTGCGGGCTCAGAAAGCCTGGCATTTGTTCCTTaGTTCAAAGTCACTGCTTCC +
Preference number: 4 (lower is better)
Translates to: WAVEANQQFRRTGAGSESLAFVP*FKVTAS
Trigger: GGAAGCAGTGACTTTGAAGCAAGGAACAAATGCCAG...GCTTTCTGAGCCCGCACCTGTGCGCCTAAACTGCTGATTGGCCTCAACTGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR GCA 90 bp GCAGCAGCAATCTCCGGCGTGTTCTGGAATCAGAAGTTGAGGTCCACGTCTGATGTCTACCAGGGCAACTaGATCGTCTTTCAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: AAAISGVFWNQKLRSTSDVYQGN*IVFQLG
Trigger: TCCCAGCTGAAAGACGATGCAGTTGCCCTGGTAGAC...ATCAGACGTGGACCTCAACTTCTGATTCCAGAACACGCCGGAGATTGCTGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356406.10
CDS-3UTR GCA 90 bp GCCAATCAGCAGTTTAGGCGCACAGGTGCGGGCTCAGAAAGCAGCAGCAATCTCATTTCTTTTCCACGCTaGAAATCACCGCGATCCCAG +
Preference number: 4 (lower is better)
Translates to: ANQQFRRTGAGSESSSNLISFPR*KSPRSQ
Trigger: CTGGGATCGCGGTGATTTGCAGCGTGGAAAAGAAAT...GAGATTGCTGCTGCTTTCTGAGCCCGCACCTGTGCGCCTAAACTGCTGATTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp GCCAATCAGCAGTTTAGGCGCACAGGTGCGGGCTCAGAAAGCAGCAGCAATCTCTTGTGCGAATGGCCTTaGTATTACTGCCGTGGCTTA +
Preference number: 4 (lower is better)
Translates to: ANQQFRRTGAGSESSSNLLCEWP*YYCRGL
Trigger: TAAGCCACGGCAGTAATACCAAGGCCATTCGCACAA...GAGATTGCTGCTGCTTTCTGAGCCCGCACCTGTGCGCCTAAACTGCTGATTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp TTGAGGCCAATCAGCAGTTTAGGCGCACAGGTGCGGGCTCAGAAAGCAGCAGCAGCGCCATTGCTGCATTaGATACTCAAGCACTGGTAT +
Preference number: 4 (lower is better)
Translates to: LRPISSLGAQVRAQKAAAAPLLH*ILKHWY
Trigger: ATACCAGTGCTTGAGTATCCAATGCAGCAATGGCGC...TGCTGCTGCTTTCTGAGCCCGCACCTGTGCGCCTAAACTGCTGATTGGCCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp GGAGAGTTGACAAAGAACCAGACTGGCATCATTGACTTCTCAATGAAGTGGAGCCAAGCTCTGCCTGTCTaGCGCTGCGGTCTCCCGATG +
Preference number: 4 (lower is better)
Translates to: GELTKNQTGIIDFSMKWSQALPV*RCGLPM
Trigger: CATCGGGAGACCGCAGCGCCAGACAGGCAGAGCTTG...GCTCCACTTCATTGAGAAGTCAATGATGCCAGTCTGGTTCTTTGTCAACTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356406.10
CDS-3UTR TCA 90 bp CAACACCTTGCTTTCCTGCAGGACAGCGCCCCAGAGGTTTTTGTAGAGCTCGCCACATGTCTTCGACACTaGGGAAGTCATACTCGAAGA +
Preference number: 4 (lower is better)
Translates to: QHLAFLQDSAPEVFVELATCLRH*GSHTRR
Trigger: TCTTCGAGTATGACTTCCTCAGTGTCGAAGACATGT...GGCGAGCTCTACAAAAACCTCTGGGGCGCTGTCCTGCAGGAAAGCAAGGTGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413009.6
CDS-3UTR TCA 90 bp GGCGCACAGGTGCGGGCTCAGAAAGCAGCAGCAATCTCCGGCGTGTTCTGGAATCATAATTCAATTATGTaGCAAAGCCGAGGGAGAGTT +
Preference number: 4 (lower is better)
Translates to: GAQVRAQKAAAISGVFWNHNSIM*QSRGRV
Trigger: AACTCTCCCTCGGCTTTGTCACATAATTGAATTATG...ATTCCAGAACACGCCGGAGATTGCTGCTGCTTTCTGAGCCCGCACCTGTGCGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356406.10
CDS-3UTR GCA 90 bp ATGATCATCTGCATTTCTTTTCCACGCTGCAAATCACCGCGATCCCAGATTAGTGCTGCGGTCTCCCGATaGAAGTCCTCGCTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: MIICISFPRCKSPRSQISAAVSR*KSSLEL
Trigger: GAGCTCCAGCGAGGACTTGCATCGGGAGACCGCAGC...ACTAATCTGGGATCGCGGTGATTTGCAGCGTGGAAAAGAAATGCAGATGATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR GCA 90 bp GCAGCAGCAATCTCCGGCGTGTTCTGGAATCAGAAGTTGAGGTCCACGTCTGATGACCCAGCAAATAGTTaGTTGTCTGCTGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: AAAISGVFWNQKLRSTSDDPANS*LSAAAG
Trigger: TCCTGCTGCAGCAGACAAGCAACTATTTGCTGGGTC...ATCAGACGTGGACCTCAACTTCTGATTCCAGAACACGCCGGAGATTGCTGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR GCA 90 bp CTTCCTATGACAGGTTTGTTCACAGAAAACTCTGGCCACCAGGATGCCCGCTCCGACCCAGCAAATAGTTaGTTGTCTGCTGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: LPMTGLFTENSGHQDARSDPANS*LSAAAG
Trigger: TCCTGCTGCAGCAGACAAGCAACTATTTGCTGGGTC...GGAGCGGGCATCCTGGTGGCCAGAGTTTTCTGTGAACAAACCTGTCATAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413009.6
CDS-3UTR CCA 90 bp TCAGAAAGCAGCAGCAATCTCCGGCGTGTTCTGGAATCAGAAGTTGAGGTCCACGGGCAGTTGTGCGAATaGCCTTGGTATTACTGCCGT +
Preference number: 4 (lower is better)
Translates to: SESSSNLRRVLESEVEVHGQLCE*PWYYCR
Trigger: ACGGCAGTAATACCAAGGCCATTCGCACAACTGCCC...GTGGACCTCAACTTCTGATTCCAGAACACGCCGGAGATTGCTGCTGCTTTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp ATCTGCATTTCTTTTCCACGCTGCAAATCACCGCGATCCCAGATTAGTCCAGCCAGAAGCGAAGAGCGATaGCCACGGCCAGCTTTAGGT +
Preference number: 4 (lower is better)
Translates to: ICISFPRCKSPRSQISPARSEER*PRPALG
Trigger: ACCTAAAGCTGGCCGTGGCCATCGCTCTTCGCTTCT...GGCTGGACTAATCTGGGATCGCGGTGATTTGCAGCGTGGAAAAGAAATGCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp GCCAATCAGCAGTTTAGGCGCACAGGTGCGGGCTCAGAAAGCAGCAGCAATCTCTGGATACTCAAGCACTaGTATTTCCTCCTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: ANQQFRRTGAGSESSSNLWILKH*YFLLLC
Trigger: ACAGAGGAGGAGGAAATACCAGTGCTTGAGTATCCA...GAGATTGCTGCTGCTTTCTGAGCCCGCACCTGTGCGCCTAAACTGCTGATTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp AGACATGATCATCTGCATTTCTTTTCCACGCTGCAAATCACCGCGATCCCAGATGATGCAAGTCCTCGCTaGAGCTCCACCAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: RHDHLHFFSTLQITAIPDDASPR*SSTRSR
Trigger: CCTGGACCTGGTGGAGCTCCAGCGAGGACTTGCATC...ATCTGGGATCGCGGTGATTTGCAGCGTGGAAAAGAAATGCAGATGATCATGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR TCA 90 bp GGCGCACAGGTGCGGGCTCAGAAAGCAGCAGCAATCTCCGGCGTGTTCTGGAATATTTCAGACTTCCTATaGCAGGTTTGTTCACAGAAA +
Preference number: 4 (lower is better)
Translates to: GAQVRAQKAAAISGVFWNISDFL*QVCSQK
Trigger: TTTCTGTGAACAAACCTGTCATAGGAAGTCTGAAAT...ATTCCAGAACACGCCGGAGATTGCTGCTGCTTTCTGAGCCCGCACCTGTGCGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR TCA 90 bp AGCAGTTTAGGCGCACAGGTGCGGGCTCAGAAAGCAGCAGCAATCTCCGGCGTGCTGAACCCTGAAAACTaGATGTGCGAAATTCTAATT +
Preference number: 4 (lower is better)
Translates to: SSLGAQVRAQKAAAISGVLNPEN*MCEILI
Trigger: AATTAGAATTTCGCACATTCAGTTTTCAGGGTTCAG...CACGCCGGAGATTGCTGCTGCTTTCTGAGCCCGCACCTGTGCGCCTAAACTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356406.10
CDS-3UTR GCA 90 bp GGCGCACAGGTGCGGGCTCAGAAAGCAGCAGCAATCTCCGGCGTGTTCTGGAATTTGCTTCAAAGTCACTaGTTCCTGATCTTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: GAQVRAQKAAAISGVFWNLLQSH*FLIFSL
Trigger: AAGAGAAAAGATCAGGAAGCAGTGACTTTGAAGCAA...ATTCCAGAACACGCCGGAGATTGCTGCTGCTTTCTGAGCCCGCACCTGTGCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp GGAGAGTTGACAAAGAACCAGACTGGCATCATTGACTTCTCAATGAAGTGGAGCACACCACCGCGTGAGTaGCTGTCTTGCCCATGTTGC +
Preference number: 4 (lower is better)
Translates to: GELTKNQTGIIDFSMKWSTPPRE*LSCPCC
Trigger: GCAACATGGGCAAGACAGCCACTCACGCGGTGGTGT...GCTCCACTTCATTGAGAAGTCAATGATGCCAGTCTGGTTCTTTGTCAACTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356406.10
CDS-3UTR CCA 90 bp AACAGATGTTCCTCCTTAAGTCTTAAACCACGACATTCAGATGATCTATGTGCAAGGCCAGGGGCTTGCTaGCCGATGCCAGGGCGTGGA +
Preference number: 4 (lower is better)
Translates to: NRCSSLSLKPRHSDDLCARPGAC*PMPGRG
Trigger: TCCACGCCCTGGCATCGGCCAGCAAGCCCCTGGCCT...TGCACATAGATCATCTGAATGTCGTGGTTTAAGACTTAAGGAGGAACATCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356406.10
CDS-3UTR CCA 90 bp ATGATCATCTGCATTTCTTTTCCACGCTGCAAATCACCGCGATCCCAGATTAGTGAATTCCTTGCTGGGTaGTCCACGAGGCCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: MIICISFPRCKSPRSQISEFLAG*STRPGA
Trigger: AGCCCCTGGCCTCGTGGACCACCCAGCAAGGAATTC...ACTAATCTGGGATCGCGGTGATTTGCAGCGTGGAAAAGAAATGCAGATGATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp GGAGAGTTGACAAAGAACCAGACTGGCATCATTGACTTCTCAATGAAGTGGAGCCACCCAACCGGTTCATaGCCAGATAGCCGTGTCCTC +
Preference number: 4 (lower is better)
Translates to: GELTKNQTGIIDFSMKWSHPTGS*PDSRVL
Trigger: GAGGACACGGCTATCTGGCCATGAACCGGTTGGGTG...GCTCCACTTCATTGAGAAGTCAATGATGCCAGTCTGGTTCTTTGTCAACTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356406.10
CDS-3UTR GCA 90 bp GCCGAGGGAGAGTTGACAAAGAACCAGACTGGCATCATTGACTTCTCAATGAAGCCACAGTTCAACCCCTaGCAGGGAAACCAAAAGCAG +
Preference number: 4 (lower is better)
Translates to: AEGELTKNQTGIIDFSMKPQFNP*QGNQKQ
Trigger: CTGCTTTTGGTTTCCCTGGCAGGGGTTGAACTGTGG...CTTCATTGAGAAGTCAATGATGCCAGTCTGGTTCTTTGTCAACTCTCCCTCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356406.10
CDS-3UTR GCA 90 bp TTGACAAAGAACCAGACTGGCATCATTGACTTCTCAATGAAGTGGAGCTCGGTAAACACCTTGCTTTCCTaGAGGACAGCGCCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: LTKNQTGIIDFSMKWSSVNTLLS*RTAPQR
Trigger: CCTCTGGGGCGCTGTCCTGCAGGAAAGCAAGGTGTT...TACCGAGCTCCACTTCATTGAGAAGTCAATGATGCCAGTCTGGTTCTTTGTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356406.10
CDS-3UTR CCA 90 bp TCAGAAAGCAGCAGCAATCTCCGGCGTGTTCTGGAATCAGAAGTTGAGGTCCACTATGGAGGAGGTACTTaGCAGCCAGAGAAGAGTCAT +
Preference number: 4 (lower is better)
Translates to: SESSSNLRRVLESEVEVHYGGGT*QPEKSH
Trigger: ATGACTCTTCTCTGGCTGCCAAGTACCTCCTCCATA...GTGGACCTCAACTTCTGATTCCAGAACACGCCGGAGATTGCTGCTGCTTTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR GCA 90 bp ATCTGCATTTCTTTTCCACGCTGCAAATCACCGCGATCCCAGATTAGTCCAGCCAGCAAGCGCCATTGCTaGATTGGATACTCAAGCACT +
Preference number: 4 (lower is better)
Translates to: ICISFPRCKSPRSQISPASKRHC*IGYSST
Trigger: AGTGCTTGAGTATCCAATGCAGCAATGGCGCTTGCT...GGCTGGACTAATCTGGGATCGCGGTGATTTGCAGCGTGGAAAAGAAATGCAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR GCA 90 bp GGCTCAGAAAGCAGCAGCAATCTCCGGCGTGTTCTGGAATCAGAAGTTGAGGTCGTAGACATGATCATCTaGATTTCTTTTCCACGCTGC +
Preference number: 4 (lower is better)
Translates to: GSESSSNLRRVLESEVEVVDMII*ISFPRC
Trigger: GCAGCGTGGAAAAGAAATGCAGATGATCATGTCTAC...GACCTCAACTTCTGATTCCAGAACACGCCGGAGATTGCTGCTGCTTTCTGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR GCA 90 bp AGACATGATCATCTGCATTTCTTTTCCACGCTGCAAATCACCGCGATCCCAGATGTCTACCAGGGCAACTaGATCGTCTTTCAGCTCGGT +
Preference number: 4 (lower is better)
Translates to: RHDHLHFFSTLQITAIPDVYQGN*IVFQLG
Trigger: ACCGAGCTGAAAGACGATGCAGTTGCCCTGGTAGAC...ATCTGGGATCGCGGTGATTTGCAGCGTGGAAAAGAAATGCAGATGATCATGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413009.6
CDS-3UTR CCA 90 bp AGACATGATCATCTGCATTTCTTTTCCACGCTGCAAATCACCGCGATCCCAGATATGGCACTGGTCCCCTaGCACACACAGCTTAGCAAA +
Preference number: 4 (lower is better)
Translates to: RHDHLHFFSTLQITAIPDMALVP*HTQLSK
Trigger: TTTGCTAAGCTGTGTGTGCCAGGGGACCAGTGCCAT...ATCTGGGATCGCGGTGATTTGCAGCGTGGAAAAGAAATGCAGATGATCATGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp ATGATCATCTGCATTTCTTTTCCACGCTGCAAATCACCGCGATCCCAGATTAGTCGGCCGTGGGACACCTaGCATTTGTTCCTTGCTTCA +
Preference number: 4 (lower is better)
Translates to: MIICISFPRCKSPRSQISRPWDT*HLFLAS
Trigger: TGAAGCAAGGAACAAATGCCAGGTGTCCCACGGCCG...ACTAATCTGGGATCGCGGTGATTTGCAGCGTGGAAAAGAAATGCAGATGATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp TCTTTTCCACGCTGCAAATCACCGCGATCCCAGATTAGTCCAGCCGGCCGGGTGAAAACATTTCCTCGATaGAAATTTCCAGTTCCACAA +
Preference number: 4 (lower is better)
Translates to: SFPRCKSPRSQISPAGRVKTFPR*KFPVPQ
Trigger: TTGTGGAACTGGAAATTTCCATCGAGGAAATGTTTT...CACCCGGCCGGCTGGACTAATCTGGGATCGCGGTGATTTGCAGCGTGGAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356406.10
CDS-3UTR TCA 90 bp AACAGATGTTCCTCCTTAAGTCTTAAACCACGACATTCAGATGATCTATGTGCAGCAAACACCACCGCGTaGGTGGCTGTCTTGCCCATG +
Preference number: 4 (lower is better)
Translates to: NRCSSLSLKPRHSDDLCAANTTA*VAVLPM
Trigger: CATGGGCAAGACAGCCACTCACGCGGTGGTGTTTGC...TGCACATAGATCATCTGAATGTCGTGGTTTAAGACTTAAGGAGGAACATCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356406.10
CDS-3UTR GCA 90 bp ATGATCATCTGCATTTCTTTTCCACGCTGCAAATCACCGCGATCCCAGATTAGTTCCTTCCACAGTGGATaGCATCGCGTGATAAGAGCC +
Preference number: 4 (lower is better)
Translates to: MIICISFPRCKSPRSQISSFHSG*HRVIRA
Trigger: GGCTCTTATCACGCGATGGCATCCACTGTGGAAGGA...ACTAATCTGGGATCGCGGTGATTTGCAGCGTGGAAAAGAAATGCAGATGATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR GCA 90 bp TTGACAAAGAACCAGACTGGCATCATTGACTTCTCAATGAAGTGGAGCTCGGTAACTTCTGGTCAAGGATaGCGGGATAGGCGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: LTKNQTGIIDFSMKWSSVTSGQG*RDRRPE
Trigger: TTCTGGACGCCTATCCCGGCATCCTTGACCAGAAGT...TACCGAGCTCCACTTCATTGAGAAGTCAATGATGCCAGTCTGGTTCTTTGTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356406.10
CDS-3UTR GCA 90 bp GCTCAGAAAGCAGCAGCAATCTCCGGCGTGTTCTGGAATCAGAAGTTGAGGTCCGGTTGGAGACTGAATTaGCCATTCAAATCATTAGAC +
Preference number: 4 (lower is better)
Translates to: AQKAAAISGVFWNQKLRSGWRLN*PFKSLD
Trigger: GTCTAATGATTTGAATGGGCAATTCAGTCTCCAACC...GGACCTCAACTTCTGATTCCAGAACACGCCGGAGATTGCTGCTGCTTTCTGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356406.10
CDS-3UTR CCA 90 bp GACATGATCATCTGCATTTCTTTTCCACGCTGCAAATCACCGCGATCCCAGATTTGCCAACCCAAAACTTaGCAGCTTCGAAATCAGGGG +
Preference number: 4 (lower is better)
Translates to: DMIICISFPRCKSPRSQICQPKT*QLRNQG
Trigger: CCCCTGATTTCGAAGCTGCCAAGTTTTGGGTTGGCA...AATCTGGGATCGCGGTGATTTGCAGCGTGGAAAAGAAATGCAGATGATCATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CCA 90 bp ATCTGCATTTCTTTTCCACGCTGCAAATCACCGCGATCCCAGATTAGTCCAGCCGGAACTCTGACCTTGTaGAACATGGCGAAACCATTA +
Preference number: 4 (lower is better)
Translates to: ICISFPRCKSPRSQISPAGTLTL*NMAKPL
Trigger: TAATGGTTTCGCCATGTTCCACAAGGTCAGAGTTCC...GGCTGGACTAATCTGGGATCGCGGTGATTTGCAGCGTGGAAAAGAAATGCAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR TCA 90 bp ATGATCATCTGCATTTCTTTTCCACGCTGCAAATCACCGCGATCCCAGATTAGTGGGGCGGTTGGAGACTaGATTGCCCATTCAAATCAT +
Preference number: 4 (lower is better)
Translates to: MIICISFPRCKSPRSQISGAVGD*IAHSNH
Trigger: ATGATTTGAATGGGCAATTCAGTCTCCAACCGCCCC...ACTAATCTGGGATCGCGGTGATTTGCAGCGTGGAAAAGAAATGCAGATGATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356406.10
CDS-3UTR GCA 90 bp AGACATGATCATCTGCATTTCTTTTCCACGCTGCAAATCACCGCGATCCCAGATAGCAAGCGCCATTGCTaGATTGGATACTCAAGCACT +
Preference number: 4 (lower is better)
Translates to: RHDHLHFFSTLQITAIPDSKRHC*IGYSST
Trigger: AGTGCTTGAGTATCCAATGCAGCAATGGCGCTTGCT...ATCTGGGATCGCGGTGATTTGCAGCGTGGAAAAGAAATGCAGATGATCATGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR GCA 90 bp TTGGCTGAATGTGTGCCAGTCCCACTAGAGCTTCGATTTCAGACTTCCTATGACTGTCACCTTCGTATGTaGAGTTGGGATCGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: LAECVPVPLELRFQTSYDCHLRM*SWDRCH
Trigger: ATGACAACGATCCCAACTGCACATACGAAGGTGACA...GTCATAGGAAGTCTGAAATCGAAGCTCTAGTGGGACTGGCACACATTCAGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413009.6
CDS-3UTR GCA 90 bp CTTCCTATGACAGGTTTGTTCACAGAAAACTCTGGCCACCAGGATGCCCGCTCCTTGCTTCAAAGTCACTaGTTCCTGATCTTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: LPMTGLFTENSGHQDARSLLQSH*FLIFSL
Trigger: AAGAGAAAAGATCAGGAAGCAGTGACTTTGAAGCAA...GGAGCGGGCATCCTGGTGGCCAGAGTTTTCTGTGAACAAACCTGTCATAGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413009.6
CDS-3UTR CCA 90 bp AGACATGATCATCTGCATTTCTTTTCCACGCTGCAAATCACCGCGATCCCAGATTATGGAGGAGGTACTTaGCAGCCAGAGAAGAGTCAT +
Preference number: 4 (lower is better)
Translates to: RHDHLHFFSTLQITAIPDYGGGT*QPEKSH
Trigger: ATGACTCTTCTCTGGCTGCCAAGTACCTCCTCCATA...ATCTGGGATCGCGGTGATTTGCAGCGTGGAAAAGAAATGCAGATGATCATGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR TCA 90 bp AACAGATGTTCCTCCTTAAGTCTTAAACCACGACATTCAGATGATCTATGTGCATCTGGCGAGGAACTCTaGCCTTGTGGAACATGGCGA +
Preference number: 4 (lower is better)
Translates to: NRCSSLSLKPRHSDDLCASGEEL*PCGTWR
Trigger: TCGCCATGTTCCACAAGGTCAGAGTTCCTCGCCAGA...TGCACATAGATCATCTGAATGTCGTGGTTTAAGACTTAAGGAGGAACATCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356406.10
CDS-3UTR GCA 90 bp ATGATCATCTGCATTTCTTTTCCACGCTGCAAATCACCGCGATCCCAGATTAGTTGGCCTTGGTATTACTaGCGTGGCTTAATTCGGTCA +
Preference number: 4 (lower is better)
Translates to: MIICISFPRCKSPRSQISWPWYY*RGLIRS
Trigger: TGACCGAATTAAGCCACGGCAGTAATACCAAGGCCA...ACTAATCTGGGATCGCGGTGATTTGCAGCGTGGAAAAGAAATGCAGATGATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR GCA 90 bp AACAGATGTTCCTCCTTAAGTCTTAAACCACGACATTCAGATGATCTATGTGCATCCTTCCACAGTGGATaGCATCGCGTGATAAGAGCC +
Preference number: 4 (lower is better)
Translates to: NRCSSLSLKPRHSDDLCASFHSG*HRVIRA
Trigger: GGCTCTTATCACGCGATGGCATCCACTGTGGAAGGA...TGCACATAGATCATCTGAATGTCGTGGTTTAAGACTTAAGGAGGAACATCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356406.10
CDS-3UTR TCA 90 bp TTGGCTGAATGTGTGCCAGTCCCACTAGAGCTTCGATTTCAGACTTCCTATGACATTTCAGACTTCCTATaGCAGGTTTGTTCACAGAAA +
Preference number: 4 (lower is better)
Translates to: LAECVPVPLELRFQTSYDISDFL*QVCSQK
Trigger: TTTCTGTGAACAAACCTGTCATAGGAAGTCTGAAAT...GTCATAGGAAGTCTGAAATCGAAGCTCTAGTGGGACTGGCACACATTCAGCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413009.6
CDS TCA 90 bp GCAGGGCCGCGTGGCGGCTCAGGGACCACAGGGCGTACAGAGCACTaGGCCGCCCCAGCACGGCCCGCAGCGAGGGCGGCACGGAAGGCT +
Preference number: 5 (lower is better)
Translates to: AGPRGGSGTTGRTEH*AAPARPAARAARKA
Trigger: AGCCTTCCGTGCCGCCCTCGCTGCGGGCCGTGCTGGGGCGGCTCAGTGCTCTGTACGCCCTGTGGTCCCTGAGCCGCCACGCGGCCCTGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000510365.5
CDS CCA 90 bp CTGAGCCGCCCCAGCACGGCCCGCAGCGAGGGCGGCACGGAAGGCTaGTGCACGTGCTCGTGGAACCTCTGGACCACCGTGAGCTCCACG +
Preference number: 5 (lower is better)
Translates to: LSRPSTARSEGGTEG*CTCSWNLWTTVSST
Trigger: CGTGGAGCTCACGGTGGTCCAGAGGTTCCACGAGCACGTGCACCAGCCTTCCGTGCCGCCCTCGCTGCGGGCCGTGCTGGGGCGGCTCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000510365.5
CDS GCA 90 bp CCCAGCACGGCCCGCAGCGAGGGCGGCACGGAAGGCTGGTGCACGTaGTCGTGGAACCTCTGGACCACCGTGAGCTCCACGAAGGCCAGC +
Preference number: 5 (lower is better)
Translates to: PSTARSEGGTEGWCT*SWNLWTTVSSTKAS
Trigger: GCTGGCCTTCGTGGAGCTCACGGTGGTCCAGAGGTTCCACGAGCACGTGCACCAGCCTTCCGTGCCGCCCTCGCTGCGGGCCGTGCTGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000510365.5
CDS GCA 90 bp AGCCGCCCCAGCACGGCCCGCAGCGAGGGCGGCACGGAAGGCTGGTaGACGTGCTCGTGGAACCTCTGGACCACCGTGAGCTCCACGAAG +
Preference number: 5 (lower is better)
Translates to: SRPSTARSEGGTEGW*TCSWNLWTTVSSTK
Trigger: CTTCGTGGAGCTCACGGTGGTCCAGAGGTTCCACGAGCACGTGCACCAGCCTTCCGTGCCGCCCTCGCTGCGGGCCGTGCTGGGGCGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000510365.5
CDS GCA 90 bp GGGATGCCTGTCGGCCCGCGACCGACTCGGAGTACTGGGACTAGCTaGCCGCACAGCGCAGCTGTCTCTGGCCTGGCCCCACTGCTCCCC +
Preference number: 5 (lower is better)
Translates to: GMPVGPRPTRSTGTS*PHSAAVSGLAPLLP
Trigger: GGGGAGCAGTGGGGCCAGGCCAGAGACAGCTGCGCTGTGCGGGCAGCTAGTCCCAGTACTCCGAGTCGGTCGCGGGCCGACAGGCATCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503233.5
ENST00000514423.1
CDS CCA 90 bp AGCGAGGGCGGCACGGAAGGCTGGTGCACGTGCTCGTGGAACCTCTaGACCACCGTGAGCTCCACGAAGGCCAGCGCCAACGGACGGCCG +
Preference number: 5 (lower is better)
Translates to: SEGGTEGWCTCSWNL*TTVSSTKASANGRP
Trigger: CGGCCGTCCGTTGGCGCTGGCCTTCGTGGAGCTCACGGTGGTCCAGAGGTTCCACGAGCACGTGCACCAGCCTTCCGTGCCGCCCTCGCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000510365.5
CDS CCA 90 bp ACGGCCCGCAGCGAGGGCGGCACGGAAGGCTGGTGCACGTGCTCGTaGAACCTCTGGACCACCGTGAGCTCCACGAAGGCCAGCGCCAAC +
Preference number: 5 (lower is better)
Translates to: TARSEGGTEGWCTCS*NLWTTVSSTKASAN
Trigger: GTTGGCGCTGGCCTTCGTGGAGCTCACGGTGGTCCAGAGGTTCCACGAGCACGTGCACCAGCCTTCCGTGCCGCCCTCGCTGCGGGCCGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000510365.5
CDS CCA 90 bp TGGGTGGTCCACGAGGCCAGGGGCTTGCTGGCCGATGCCAGGGCGTaGATCTCACGTCCAAGCTCTGCCTGTCTGGCGCTGCGGTCTCCC +
Preference number: 5 (lower is better)
Translates to: WVVHEARGLLADARA*ISRPSSACLALRSP
Trigger: GGGAGACCGCAGCGCCAGACAGGCAGAGCTTGGACGTGAGATCCACGCCCTGGCATCGGCCAGCAAGCCCCTGGCCTCGTGGACCACCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000508302.1
ENST00000510365.5
CDS-3UTR CAA 90 bp CCGCCTGGGCAGTTGAGGCCAATCAGCAGTTTAGGCGCACAGGTGCGGGCTCAGCACGAGGCCAGGGGCTaGCTGGCCGATGCCAGGGCG +
Preference number: 5 (lower is better)
Translates to: PPGQLRPISSLGAQVRAQHEARG*LADARA
Trigger: CGCCCTGGCATCGGCCAGCAAGCCCCTGGCCTCGTG...CTGAGCCCGCACCTGTGCGCCTAAACTGCTGATTGGCCTCAACTGCCCAGGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS TCA 90 bp GCACGGAAGGCTGGTGCACGTGCTCGTGGAACCTCTGGACCACCGTaGGCTCCACGAAGGCCAGCGCCAACGGACGGCCGTGGGACACCT +
Preference number: 5 (lower is better)
Translates to: ARKAGARARGTSGPP*APRRPAPTDGRGTP
Trigger: AGGTGTCCCACGGCCGTCCGTTGGCGCTGGCCTTCGTGGAGCTCACGGTGGTCCAGAGGTTCCACGAGCACGTGCACCAGCCTTCCGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000510365.5
CDS-3UTR CAA 90 bp CGCGATCCCAGATTAGTCCAGCCGGCCGGGTGCCTCCCTCCCGTCCGCCTGGGCCGTCCGCCTGGGCAGTaGAGGCCAATCAGCAGTTTA +
Preference number: 5 (lower is better)
Translates to: RDPRLVQPAGCLPPVRLGRPPGQ*RPISSL
Trigger: TAAACTGCTGATTGGCCTCAACTGCCCAGGCGGACG...GCCCAGGCGGACGGGAGGGAGGCACCCGGCCGGCTGGACTAATCTGGGATCGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS CCA 90 bp CGTGTCCTCCACACGCCTCCCGGCATTCCTGAATTCCTTGCTGGGTaGTCCACGAGGCCAGGGGCTTGCTGGCCGATGCCAGGGCGTGGA +
Preference number: 5 (lower is better)
Translates to: RVLHTPPGIPEFLAG*STRPGACWPMPGRG
Trigger: TCCACGCCCTGGCATCGGCCAGCAAGCCCCTGGCCTCGTGGACCACCCAGCAAGGAATTCAGGAATGCCGGGAGGCGTGTGGAGGACACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000508302.1
ENST00000510365.5
CDS-3UTR CAA 90 bp GCCGGCCGGGTGCCTCCCTCCCGTCCGCCTGGGCAGTTGAGGCCAATCAGCAGTGCATTCCTGAATTCCTaGCTGGGTGGTCCACGAGGC +
Preference number: 5 (lower is better)
Translates to: AGRVPPSRPPGQLRPISSAFLNS*LGGPRG
Trigger: GCCTCGTGGACCACCCAGCAAGGAATTCAGGAATGC...ACTGCTGATTGGCCTCAACTGCCCAGGCGGACGGGAGGGAGGCACCCGGCCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CAA 90 bp CGCGATCCCAGATTAGTCCAGCCGGCCGGGTGCCTCCCTCCCGTCCGCCTGGGCGTGCAGTTGGGATCGTaGTCATCTCTAAGGACACCC +
Preference number: 5 (lower is better)
Translates to: RDPRLVQPAGCLPPVRLGVQLGS*SSLRTP
Trigger: GGGTGTCCTTAGAGATGACAACGATCCCAACTGCAC...GCCCAGGCGGACGGGAGGGAGGCACCCGGCCGGCTGGACTAATCTGGGATCGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS GCA 90 bp AATTCCTTGCTGGGTGGTCCACGAGGCCAGGGGCTTGCTGGCCGATaGCAGGGCGTGGATCTCACGTCCAAGCTCTGCCTGTCTGGCGCT +
Preference number: 5 (lower is better)
Translates to: NSLLGGPRGQGLAGR*QGVDLTSKLCLSGA
Trigger: AGCGCCAGACAGGCAGAGCTTGGACGTGAGATCCACGCCCTGGCATCGGCCAGCAAGCCCCTGGCCTCGTGGACCACCCAGCAAGGAATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000508302.1
ENST00000510365.5
CDS-3UTR CAA 90 bp CGCGATCCCAGATTAGTCCAGCCGGCCGGGTGCCTCCCTCCCGTCCGCCTGGGCTACTCGAAGATCCGCTaGCATCGAAGGAAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: RDPRLVQPAGCLPPVRLGYSKIR*HRRKFS
Trigger: GCTGAACTTCCTTCGATGCAAGCGGATCTTCGAGTA...GCCCAGGCGGACGGGAGGGAGGCACCCGGCCGGCTGGACTAATCTGGGATCGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CAA 90 bp CGCGATCCCAGATTAGTCCAGCCGGCCGGGTGCCTCCCTCCCGTCCGCCTGGGCTGCTGCAGCAGGATGTaGTTGTCACCTTCGTATGTG +
Preference number: 5 (lower is better)
Translates to: RDPRLVQPAGCLPPVRLGCCSRM*LSPSYV
Trigger: CACATACGAAGGTGACAACAACATCCTGCTGCAGCA...GCCCAGGCGGACGGGAGGGAGGCACCCGGCCGGCTGGACTAATCTGGGATCGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CAA 90 bp CCGCCTGGGCAGTTGAGGCCAATCAGCAGTTTAGGCGCACAGGTGCGGGCTCAGGCCCGCTCCAACACCTaGCTTTCCTGCAGGACAGCG +
Preference number: 5 (lower is better)
Translates to: PPGQLRPISSLGAQVRAQARSNT*LSCRTA
Trigger: CGCTGTCCTGCAGGAAAGCAAGGTGTTGGAGCGGGC...CTGAGCCCGCACCTGTGCGCCTAAACTGCTGATTGGCCTCAACTGCCCAGGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS GCA 90 bp GGCATTCCTGAATTCCTTGCTGGGTGGTCCACGAGGCCAGGGGCTTaGTGGCCGATGCCAGGGCGTGGATCTCACGTCCAAGCTCTGCCT +
Preference number: 5 (lower is better)
Translates to: GIPEFLAGWSTRPGA*WPMPGRGSHVQALP
Trigger: AGGCAGAGCTTGGACGTGAGATCCACGCCCTGGCATCGGCCAGCAAGCCCCTGGCCTCGTGGACCACCCAGCAAGGAATTCAGGAATGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000508302.1
ENST00000510365.5
CDS CCA 90 bp GCACTCCTGGCTCGTGTCTGTCTGTGCCTTATGGGACCTAGTGGGTaGGCTTCTGCTCTCTGCAGAGCCCGGCAGGCTGCCTGGCATGAG +
Preference number: 5 (lower is better)
Translates to: ALLARVCLCLMGPSG*ASALCRARQAAWHE
Trigger: CTCATGCCAGGCAGCCTGCCGGGCTCTGCAGAGAGCAGAAGCCCACCCACTAGGTCCCATAAGGCACAGACAGACACGAGCCAGGAGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510365.5
CDS-3UTR CAA 90 bp GCCGGCCGGGTGCCTCCCTCCCGTCCGCCTGGGCAGTTGAGGCCAATCAGCAGTTGCAGCAGGATGTTGTaGTCACCTTCGTATGTGCAG +
Preference number: 5 (lower is better)
Translates to: AGRVPPSRPPGQLRPISSCSRML*SPSYVQ
Trigger: CTGCACATACGAAGGTGACAACAACATCCTGCTGCA...ACTGCTGATTGGCCTCAACTGCCCAGGCGGACGGGAGGGAGGCACCCGGCCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS GCA 90 bp GATCTCACGTCCAAGCTCTGCCTGTCTGGCGCTGCGGTCTCCCGATaGAAGTCCTCGCTGGAGCTCCACCAGGTCCAGGAAGAGCGACTT +
Preference number: 5 (lower is better)
Translates to: DLTSKLCLSGAAVSR*KSSLELHQVQEERL
Trigger: AAGTCGCTCTTCCTGGACCTGGTGGAGCTCCAGCGAGGACTTGCATCGGGAGACCGCAGCGCCAGACAGGCAGAGCTTGGACGTGAGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000508302.1
ENST00000510365.5
CDS GCA 90 bp TGGGAACACAAAGCCAGGACGGCGCTCTCCAACACTTCTCCCGCCTaGTCACCGGAGAAGTATCCTCCTGCAGGGACTCAGAGGCCGCAG +
Preference number: 5 (lower is better)
Translates to: WEHKARTALSNTSPA*SPEKYPPAGTQRPQ
Trigger: CTGCGGCCTCTGAGTCCCTGCAGGAGGATACTTCTCCGGTGAGCAGGCGGGAGAAGTGTTGGAGAGCGCCGTCCTGGCTTTGTGTTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515797.5
CDS GCA 90 bp CGCCATCCGCCGTGCTCAGTGAGTCCCGTGGAAGGAGGACGATGGTaGAGGAAGCAGCTTCCTAGATACAACACGGGGGCCCTGACTCTG +
Preference number: 5 (lower is better)
Translates to: RHPPCSVSPVEGGRW*RKQLPRYNTGALTL
Trigger: CAGAGTCAGGGCCCCCGTGTTGTATCTAGGAAGCTGCTTCCTGCACCATCGTCCTCCTTCCACGGGACTCACTGAGCACGGCGGATGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510365.5
CDS CCA 90 bp ATTCCTGAATTCCTTGCTGGGTGGTCCACGAGGCCAGGGGCTTGCTaGCCGATGCCAGGGCGTGGATCTCACGTCCAAGCTCTGCCTGTC +
Preference number: 5 (lower is better)
Translates to: IPEFLAGWSTRPGAC*PMPGRGSHVQALPV
Trigger: GACAGGCAGAGCTTGGACGTGAGATCCACGCCCTGGCATCGGCCAGCAAGCCCCTGGCCTCGTGGACCACCCAGCAAGGAATTCAGGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000508302.1
ENST00000510365.5
CDS CCA 90 bp CAGCGCCATCCGCCGTGCTCAGTGAGTCCCGTGGAAGGAGGACGATaGTGCAGGAAGCAGCTTCCTAGATACAACACGGGGGCCCTGACT +
Preference number: 5 (lower is better)
Translates to: QRHPPCSVSPVEGGR*CRKQLPRYNTGALT
Trigger: AGTCAGGGCCCCCGTGTTGTATCTAGGAAGCTGCTTCCTGCACCATCGTCCTCCTTCCACGGGACTCACTGAGCACGGCGGATGGCGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510365.5
CDS-3UTR CAA 90 bp GCTCAGAAAGCAGCAGCAATCTCCGGCGTGTTCTGGAATCAGAAGTTGAGGTCCCACGAGGCCAGGGGCTaGCTGGCCGATGCCAGGGCG +
Preference number: 5 (lower is better)
Translates to: AQKAAAISGVFWNQKLRSHEARG*LADARA
Trigger: CGCCCTGGCATCGGCCAGCAAGCCCCTGGCCTCGTG...GGACCTCAACTTCTGATTCCAGAACACGCCGGAGATTGCTGCTGCTTTCTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CAA 90 bp CGCGATCCCAGATTAGTCCAGCCGGCCGGGTGCCTCCCTCCCGTCCGCCTGGGCCTTCCTATGACAGGTTaGTTCACAGAAAACTCTGGC +
Preference number: 5 (lower is better)
Translates to: RDPRLVQPAGCLPPVRLGLPMTG*FTENSG
Trigger: GCCAGAGTTTTCTGTGAACAAACCTGTCATAGGAAG...GCCCAGGCGGACGGGAGGGAGGCACCCGGCCGGCTGGACTAATCTGGGATCGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS TCA 90 bp GACGATGGTGCAGGAAGCAGCTTCCTAGATACAACACGGGGGCCCTaGCTCTGGGGAGGACAGCAAGCCCGCAGTCAGAAGCCTCACCTC +
Preference number: 5 (lower is better)
Translates to: DDGAGSSFLDTTRGP*LWGGQQARSQKPHL
Trigger: GAGGTGAGGCTTCTGACTGCGGGCTTGCTGTCCTCCCCAGAGTCAGGGCCCCCGTGTTGTATCTAGGAAGCTGCTTCCTGCACCATCGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510365.5
CDS CCA 90 bp AGGGTCTTCGGGTCCCGGATCTGCACGATAAAGGGATGCAGCCCATaGCACTGGTCCCCTGGCACACACAGCTTAGCAAACACCACCGCG +
Preference number: 5 (lower is better)
Translates to: RVFGSRICTIKGCSP*HWSPGTHSLANTTA
Trigger: CGCGGTGGTGTTTGCTAAGCTGTGTGTGCCAGGGGACCAGTGCCATGGGCTGCATCCCTTTATCGTGCAGATCCGGGACCCGAAGACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000510365.5
CDS CCA 90 bp AGCTCTGCCTGTCTGGCGCTGCGGTCTCCCGATGCAAGTCCTCGCTaGAGCTCCACCAGGTCCAGGAAGAGCGACTTGGAGAAATGGTCT +
Preference number: 5 (lower is better)
Translates to: SSACLALRSPDASPR*SSTRSRKSDLEKWS
Trigger: AGACCATTTCTCCAAGTCGCTCTTCCTGGACCTGGTGGAGCTCCAGCGAGGACTTGCATCGGGAGACCGCAGCGCCAGACAGGCAGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000508302.1
ENST00000510365.5
CDS-3UTR CAA 90 bp CGCTGCAAATCACCGCGATCCCAGATTAGTCCAGCCGGCCGGGTGCCTCCCTCCGATCGTAGTGGGCAGTaGTGCGAATGGCCTTGGTAT +
Preference number: 5 (lower is better)
Translates to: RCKSPRSQISPAGRVPPSDRSGQ*CEWPWY
Trigger: ATACCAAGGCCATTCGCACAACTGCCCACTACGATC...GGAGGGAGGCACCCGGCCGGCTGGACTAATCTGGGATCGCGGTGATTTGCAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CAA 90 bp TCTTTTCCACGCTGCAAATCACCGCGATCCCAGATTAGTCCAGCCGGCCGGGTGGCCCGCTCCAACACCTaGCTTTCCTGCAGGACAGCG +
Preference number: 5 (lower is better)
Translates to: SFPRCKSPRSQISPAGRVARSNT*LSCRTA
Trigger: CGCTGTCCTGCAGGAAAGCAAGGTGTTGGAGCGGGC...CACCCGGCCGGCTGGACTAATCTGGGATCGCGGTGATTTGCAGCGTGGAAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS TCA 90 bp GAACTGGGCTTCTCATCTGTCCACAGCGCCATCCGCCGTGCTCAGTaGGTCCCGTGGAAGGAGGACGATGGTGCAGGAAGCAGCTTCCTA +
Preference number: 5 (lower is better)
Translates to: ELGFSSVHSAIRRAQ*VPWKEDDGAGSSFL
Trigger: TAGGAAGCTGCTTCCTGCACCATCGTCCTCCTTCCACGGGACTCACTGAGCACGGCGGATGGCGCTGTGGACAGATGAGAAGCCCAGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510365.5
CDS GCA 90 bp GCTCTCCAACACTTCTCCCGCCTGCTCACCGGAGAAGTATCCTCCTaGAAGCACAGCCTCGGTCACATGGGGGCTGGGTCCAGTCCAAAA +
Preference number: 5 (lower is better)
Translates to: ALQHFSRLLTGEVSS*KHSLGHMGAGSSPK
Trigger: TTTTGGACTGGACCCAGCCCCCATGTGACCGAGGCTGTGCTTGCAGGAGGATACTTCTCCGGTGAGCAGGCGGGAGAAGTGTTGGAGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512411.5
CDS CCA 90 bp ATTCCCAAGTCTAGGCACTCCTGGCTCGTGTCTGTCTGTGCCTTATaGGACCTAGTGGGTGGGCTTCTGCTCTCTGCAGAGCCCGGCAGG +
Preference number: 5 (lower is better)
Translates to: IPKSRHSWLVSVCAL*DLVGGLLLSAEPGR
Trigger: CCTGCCGGGCTCTGCAGAGAGCAGAAGCCCACCCACTAGGTCCCATAAGGCACAGACAGACACGAGCCAGGAGTGCCTAGACTTGGGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510365.5
CDS-3UTR CAA 90 bp AAATCACCGCGATCCCAGATTAGTCCAGCCGGCCGGGTGCCTCCCTCCCGTCCGTGGAAGCAAGCGCCATaGCTGCATTGGATACTCAAG +
Preference number: 5 (lower is better)
Translates to: KSPRSQISPAGRVPPSRPWKQAP*LHWILK
Trigger: CTTGAGTATCCAATGCAGCAATGGCGCTTGCTTCCA...CGGACGGGAGGGAGGCACCCGGCCGGCTGGACTAATCTGGGATCGCGGTGATTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CAA 90 bp CCCTCCCGTCCGCCTGGGCAGTTGAGGCCAATCAGCAGTTTAGGCGCACAGGTGTCCAGGAAGAGCGACTaGGAGAAATGGTCTAAGGCG +
Preference number: 5 (lower is better)
Translates to: PSRPPGQLRPISSLGAQVSRKSD*EKWSKA
Trigger: CGCCTTAGACCATTTCTCCAAGTCGCTCTTCCTGGA...CACCTGTGCGCCTAAACTGCTGATTGGCCTCAACTGCCCAGGCGGACGGGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CAA 90 bp CAGCAGTTTAGGCGCACAGGTGCGGGCTCAGAAAGCAGCAGCAATCTCCGGCGTCGTCCGCCTGGGCAGTaGAGGCCAATCAGCAGTTTA +
Preference number: 5 (lower is better)
Translates to: QQFRRTGAGSESSSNLRRRPPGQ*RPISSL
Trigger: TAAACTGCTGATTGGCCTCAACTGCCCAGGCGGACG...ACGCCGGAGATTGCTGCTGCTTTCTGAGCCCGCACCTGTGCGCCTAAACTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS TCA 90 bp GGATACTCAAGCACTGGTATTTCCTCCTCCTCTGTGGGTCCAAACTaGCGCCGAGTGGCTGAGAAGCGAAGAGCGATGGCCACGGCCAGC +
Preference number: 5 (lower is better)
Translates to: GYSSTGISSSSVGPN*RRVAEKRRAMATAS
Trigger: GCTGGCCGTGGCCATCGCTCTTCGCTTCTCAGCCACTCGGCGTCAGTTTGGACCCACAGAGGAGGAGGAAATACCAGTGCTTGAGTATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000510365.5
CDS TCA 90 bp GCCCCAGAGGTTTTTGTAGAGCTCGCCGTCGGCTCTGCCAATCGGTaGGTCCAGAACAAAGTCAGGAGGAGCGATCACGTCTACCAGGGC +
Preference number: 5 (lower is better)
Translates to: APEVFVELAVGSANR*VQNKVRRSDHVYQG
Trigger: GCCCTGGTAGACGTGATCGCTCCTCCTGACTTTGTTCTGGACTCACCGATTGGCAGAGCCGACGGCGAGCTCTACAAAAACCTCTGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000512411.5
ENST00000515797.5
CDS GCA 90 bp CATTATGGAACTGGGCTTCTCATCTGTCCACAGCGCCATCCGCCGTaGTCAGTGAGTCCCGTGGAAGGAGGACGATGGTGCAGGAAGCAG +
Preference number: 5 (lower is better)
Translates to: HYGTGLLICPQRHPP*SVSPVEGGRWCRKQ
Trigger: CTGCTTCCTGCACCATCGTCCTCCTTCCACGGGACTCACTGAGCACGGCGGATGGCGCTGTGGACAGATGAGAAGCCCAGTTCCATAATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510365.5
CDS CCA 90 bp CCGGATCTGCACGATAAAGGGATGCAGCCCATGGCACTGGTCCCCTaGCACACACAGCTTAGCAAACACCACCGCGTGAGTGGCTGTCTT +
Preference number: 5 (lower is better)
Translates to: PDLHDKGMQPMALVP*HTQLSKHHRVSGCL
Trigger: AAGACAGCCACTCACGCGGTGGTGTTTGCTAAGCTGTGTGTGCCAGGGGACCAGTGCCATGGGCTGCATCCCTTTATCGTGCAGATCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000510365.5
CDS-3UTR CAA 90 bp CCCTCCCGTCCGCCTGGGCAGTTGAGGCCAATCAGCAGTTTAGGCGCACAGGTGAGCGCCATTGCTGCATaGGATACTCAAGCACTGGTA +
Preference number: 5 (lower is better)
Translates to: PSRPPGQLRPISSLGAQVSAIAA*DTQALV
Trigger: TACCAGTGCTTGAGTATCCAATGCAGCAATGGCGCT...CACCTGTGCGCCTAAACTGCTGATTGGCCTCAACTGCCCAGGCGGACGGGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS TCA 90 bp TGGCACTGGTCCCCTGGCACACACAGCTTAGCAAACACCACCGCGTaGGTGGCTGTCTTGCCCATGTTGCCAACCCAAAACTTGGCAGCT +
Preference number: 5 (lower is better)
Translates to: WHWSPGTHSLANTTA*VAVLPMLPTQNLAA
Trigger: AGCTGCCAAGTTTTGGGTTGGCAACATGGGCAAGACAGCCACTCACGCGGTGGTGTTTGCTAAGCTGTGTGTGCCAGGGGACCAGTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000510365.5
CDS CCA 90 bp TGTATGCTGCCAGGGCGACTGCAGAGTCCAAGCAGTCGGCAACACTaGAGACCTCAAACTTCTGGTCAAGGATGCCGGGATAGGCGTCCA +
Preference number: 5 (lower is better)
Translates to: CMLPGRLQSPSSRQH*RPQTSGQGCRDRRP
Trigger: TGGACGCCTATCCCGGCATCCTTGACCAGAAGTTTGAGGTCTCCAGTGTTGCCGACTGCTTGGACTCTGCAGTCGCCCTGGCAGCATACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000508302.1
ENST00000510365.5
CDS-3UTR CAA 90 bp AGCAGTTTAGGCGCACAGGTGCGGGCTCAGAAAGCAGCAGCAATCTCCGGCGTGTCCAGGAAGAGCGACTaGGAGAAATGGTCTAAGGCG +
Preference number: 5 (lower is better)
Translates to: SSLGAQVRAQKAAAISGVSRKSD*EKWSKA
Trigger: CGCCTTAGACCATTTCTCCAAGTCGCTCTTCCTGGA...CACGCCGGAGATTGCTGCTGCTTTCTGAGCCCGCACCTGTGCGCCTAAACTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CAA 90 bp AGCAGTTTAGGCGCACAGGTGCGGGCTCAGAAAGCAGCAGCAATCTCCGGCGTGGTGCAGTTGGGATCGTaGTCATCTCTAAGGACACCC +
Preference number: 5 (lower is better)
Translates to: SSLGAQVRAQKAAAISGVVQLGS*SSLRTP
Trigger: GGGTGTCCTTAGAGATGACAACGATCCCAACTGCAC...CACGCCGGAGATTGCTGCTGCTTTCTGAGCCCGCACCTGTGCGCCTAAACTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CAA 90 bp TCCCGTCCGCCTGGGCAGTTGAGGCCAATCAGCAGTTTAGGCGCACAGGTGCGGCCTTCGTATGTGCAGTaGGGATCGTTGTCATCTCTA +
Preference number: 5 (lower is better)
Translates to: SRPPGQLRPISSLGAQVRPSYVQ*GSLSSL
Trigger: TAGAGATGACAACGATCCCAACTGCACATACGAAGG...CCGCACCTGTGCGCCTAAACTGCTGATTGGCCTCAACTGCCCAGGCGGACGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CAA 90 bp GCTGCAAATCACCGCGATCCCAGATTAGTCCAGCCGGCCGGGTGCCTCCCTCCCTTCGTTTCATTAGACTaGGCTGAATGTGTGCCAGTC +
Preference number: 5 (lower is better)
Translates to: AANHRDPRLVQPAGCLPPFVSLD*AECVPV
Trigger: GACTGGCACACATTCAGCCAAGTCTAATGAAACGAA...GGGAGGGAGGCACCCGGCCGGCTGGACTAATCTGGGATCGCGGTGATTTGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS TCA 90 bp AAACTTCTGGTCAAGGATGCCGGGATAGGCGTCCAGAAAGTCCACTaGCTTCAGCGGACTGCGGAAGCAAGCTCCATCGTGGACCTGGTG +
Preference number: 5 (lower is better)
Translates to: KLLVKDAGIGVQKVH*LQRTAEASSIVDLV
Trigger: CACCAGGTCCACGATGGAGCTTGCTTCCGCAGTCCGCTGAAGTCAGTGGACTTTCTGGACGCCTATCCCGGCATCCTTGACCAGAAGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000508302.1
ENST00000510365.5
CDS GCA 90 bp CCAAGCAGTCGGCAACACTGGAGACCTCAAACTTCTGGTCAAGGATaGCGGGATAGGCGTCCAGAAAGTCCACTGACTTCAGCGGACTGC +
Preference number: 5 (lower is better)
Translates to: PSSRQHWRPQTSGQG*RDRRPESPLTSADC
Trigger: GCAGTCCGCTGAAGTCAGTGGACTTTCTGGACGCCTATCCCGGCATCCTTGACCAGAAGTTTGAGGTCTCCAGTGTTGCCGACTGCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000508302.1
ENST00000510365.5
CDS-3UTR CAA 90 bp GCCTGGGCAGTTGAGGCCAATCAGCAGTTTAGGCGCACAGGTGCGGGCTCAGAATGCAGCAGGATGTTGTaGTCACCTTCGTATGTGCAG +
Preference number: 5 (lower is better)
Translates to: AWAVEANQQFRRTGAGSECSRML*SPSYVQ
Trigger: CTGCACATACGAAGGTGACAACAACATCCTGCTGCA...TTCTGAGCCCGCACCTGTGCGCCTAAACTGCTGATTGGCCTCAACTGCCCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CAA 90 bp CAGCAGTTTAGGCGCACAGGTGCGGGCTCAGAAAGCAGCAGCAATCTCCGGCGTTGCTGCAGCAGGATGTaGTTGTCACCTTCGTATGTG +
Preference number: 5 (lower is better)
Translates to: QQFRRTGAGSESSSNLRRCCSRM*LSPSYV
Trigger: CACATACGAAGGTGACAACAACATCCTGCTGCAGCA...ACGCCGGAGATTGCTGCTGCTTTCTGAGCCCGCACCTGTGCGCCTAAACTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CAA 90 bp TGGGCAGTTGAGGCCAATCAGCAGTTTAGGCGCACAGGTGCGGGCTCAGAAAGCACCTTCAGAGGGCTCTaGAACATGTCTTCGACACTG +
Preference number: 5 (lower is better)
Translates to: WAVEANQQFRRTGAGSESTFRGL*NMSSTL
Trigger: CAGTGTCGAAGACATGTTCAAGAGCCCTCTGAAGGT...GCTTTCTGAGCCCGCACCTGTGCGCCTAAACTGCTGATTGGCCTCAACTGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CAA 90 bp TCTTTTCCACGCTGCAAATCACCGCGATCCCAGATTAGTCCAGCCGGCCGGGTGTTGCCAACCCAAAACTaGGCAGCTTCGAAATCAGGG +
Preference number: 5 (lower is better)
Translates to: SFPRCKSPRSQISPAGRVLPTQN*AASKSG
Trigger: CCCTGATTTCGAAGCTGCCAAGTTTTGGGTTGGCAA...CACCCGGCCGGCTGGACTAATCTGGGATCGCGGTGATTTGCAGCGTGGAAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CAA 90 bp GGCTCAGAAAGCAGCAGCAATCTCCGGCGTGTTCTGGAATCAGAAGTTGAGGTCGCATTCCTGAATTCCTaGCTGGGTGGTCCACGAGGC +
Preference number: 5 (lower is better)
Translates to: GSESSSNLRRVLESEVEVAFLNS*LGGPRG
Trigger: GCCTCGTGGACCACCCAGCAAGGAATTCAGGAATGC...GACCTCAACTTCTGATTCCAGAACACGCCGGAGATTGCTGCTGCTTTCTGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CAA 90 bp TCTTTTCCACGCTGCAAATCACCGCGATCCCAGATTAGTCCAGCCGGCCGGGTGCCAGCAAATAGTTGCTaGTCTGCTGCAGCAGGATGT +
Preference number: 5 (lower is better)
Translates to: SFPRCKSPRSQISPAGRVPANSC*SAAAGC
Trigger: ACATCCTGCTGCAGCAGACAAGCAACTATTTGCTGG...CACCCGGCCGGCTGGACTAATCTGGGATCGCGGTGATTTGCAGCGTGGAAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS TCA 90 bp AGGAGGTACTTGGCAGCCAGAGAAGAGTCATACATGCCCAGGCACTaGATCAAGGCGGGGACCTTCAGAGGGCTCTTGAACATGTCTTCG +
Preference number: 5 (lower is better)
Translates to: RRYLAAREESYMPRH*IKAGTFRGLLNMSS
Trigger: CGAAGACATGTTCAAGAGCCCTCTGAAGGTCCCCGCCTTGATTCAGTGCCTGGGCATGTATGACTCTTCTCTGGCTGCCAAGTACCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000514423.1
CDS CCA 90 bp ATGCAAGTCCTCGCTGGAGCTCCACCAGGTCCAGGAAGAGCGACTTaGAGAAATGGTCTAAGGCGTAGACAGCTGCCAGATATGGAAGCA +
Preference number: 5 (lower is better)
Translates to: MQVLAGAPPGPGRAT*RNGLRRRQLPDMEA
Trigger: TGCTTCCATATCTGGCAGCTGTCTACGCCTTAGACCATTTCTCCAAGTCGCTCTTCCTGGACCTGGTGGAGCTCCAGCGAGGACTTGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000508302.1
ENST00000510365.5
CDS-3UTR CAA 90 bp GCCAATCAGCAGTTTAGGCGCACAGGTGCGGGCTCAGAAAGCAGCAGCAATCTCTACTCGAAGATCCGCTaGCATCGAAGGAAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: ANQQFRRTGAGSESSSNLYSKIR*HRRKFS
Trigger: GCTGAACTTCCTTCGATGCAAGCGGATCTTCGAGTA...GAGATTGCTGCTGCTTTCTGAGCCCGCACCTGTGCGCCTAAACTGCTGATTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CAA 90 bp AGGTGCGGGCTCAGAAAGCAGCAGCAATCTCCGGCGTGTTCTGGAATCAGAAGTGTTGTGCGAATGGCCTaGGTATTACTGCCGTGGCTT +
Preference number: 5 (lower is better)
Translates to: RCGLRKQQQSPACSGIRSVVRMA*VLLPWL
Trigger: AAGCCACGGCAGTAATACCAAGGCCATTCGCACAAC...ACTTCTGATTCCAGAACACGCCGGAGATTGCTGCTGCTTTCTGAGCCCGCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CAA 90 bp CAGCAGTTTAGGCGCACAGGTGCGGGCTCAGAAAGCAGCAGCAATCTCCGGCGTTTCGTTTCATTAGACTaGGCTGAATGTGTGCCAGTC +
Preference number: 5 (lower is better)
Translates to: QQFRRTGAGSESSSNLRRFVSLD*AECVPV
Trigger: GACTGGCACACATTCAGCCAAGTCTAATGAAACGAA...ACGCCGGAGATTGCTGCTGCTTTCTGAGCCCGCACCTGTGCGCCTAAACTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS CCA 90 bp ATTGCTGCATTGGATACTCAAGCACTGGTATTTCCTCCTCCTCTGTaGGTCCAAACTGACGCCGAGTGGCTGAGAAGCGAAGAGCGATGG +
Preference number: 5 (lower is better)
Translates to: IAALDTQALVFPPPL*VQTDAEWLRSEERW
Trigger: CCATCGCTCTTCGCTTCTCAGCCACTCGGCGTCAGTTTGGACCCACAGAGGAGGAGGAAATACCAGTGCTTGAGTATCCAATGCAGCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000510365.5
CDS-3UTR CAA 90 bp GCAGCAGCAATCTCCGGCGTGTTCTGGAATCAGAAGTTGAGGTCCACGTCTGATGATCGTAGTGGGCAGTaGTGCGAATGGCCTTGGTAT +
Preference number: 5 (lower is better)
Translates to: AAAISGVFWNQKLRSTSDDRSGQ*CEWPWY
Trigger: ATACCAAGGCCATTCGCACAACTGCCCACTACGATC...ATCAGACGTGGACCTCAACTTCTGATTCCAGAACACGCCGGAGATTGCTGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CAA 90 bp GCAGCAGCAATCTCCGGCGTGTTCTGGAATCAGAAGTTGAGGTCCACGTCTGATGCTGTCTTGCCCATGTaGCCAACCCAAAACTTGGCA +
Preference number: 5 (lower is better)
Translates to: AAAISGVFWNQKLRSTSDAVLPM*PTQNLA
Trigger: TGCCAAGTTTTGGGTTGGCAACATGGGCAAGACAGC...ATCAGACGTGGACCTCAACTTCTGATTCCAGAACACGCCGGAGATTGCTGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CAA 90 bp AGGTGCGGGCTCAGAAAGCAGCAGCAATCTCCGGCGTGTTCTGGAATCAGAAGTTGGAAGCAAGCGCCATaGCTGCATTGGATACTCAAG +
Preference number: 5 (lower is better)
Translates to: RCGLRKQQQSPACSGIRSWKQAP*LHWILK
Trigger: CTTGAGTATCCAATGCAGCAATGGCGCTTGCTTCCA...ACTTCTGATTCCAGAACACGCCGGAGATTGCTGCTGCTTTCTGAGCCCGCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CAA 90 bp TGCCCGCTCCAACACCTTGCTTTCCTGCAGGACAGCGCCCCAGAGGTTTTTGTACCTTCGTATGTGCAGTaGGGATCGTTGTCATCTCTA +
Preference number: 5 (lower is better)
Translates to: CPLQHLAFLQDSAPEVFVPSYVQ*GSLSSL
Trigger: TAGAGATGACAACGATCCCAACTGCACATACGAAGG...TACAAAAACCTCTGGGGCGCTGTCCTGCAGGAAAGCAAGGTGTTGGAGCGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413009.6
CDS-3UTR CAA 90 bp GTGCGGGCTCAGAAAGCAGCAGCAATCTCCGGCGTGTTCTGGAATCAGAAGTTGCCAGCAAATAGTTGCTaGTCTGCTGCAGCAGGATGT +
Preference number: 5 (lower is better)
Translates to: VRAQKAAAISGVFWNQKLPANSC*SAAAGC
Trigger: ACATCCTGCTGCAGCAGACAAGCAACTATTTGCTGG...CAACTTCTGATTCCAGAACACGCCGGAGATTGCTGCTGCTTTCTGAGCCCGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CAA 90 bp GCAGCAGCAATCTCCGGCGTGTTCTGGAATCAGAAGTTGAGGTCCACGTCTGATACCTTCAGAGGGCTCTaGAACATGTCTTCGACACTG +
Preference number: 5 (lower is better)
Translates to: AAAISGVFWNQKLRSTSDTFRGL*NMSSTL
Trigger: CAGTGTCGAAGACATGTTCAAGAGCCCTCTGAAGGT...ATCAGACGTGGACCTCAACTTCTGATTCCAGAACACGCCGGAGATTGCTGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CAA 90 bp TCAGAAAGCAGCAGCAATCTCCGGCGTGTTCTGGAATCAGAAGTTGAGGTCCACGTTGTGCGAATGGCCTaGGTATTACTGCCGTGGCTT +
Preference number: 5 (lower is better)
Translates to: SESSSNLRRVLESEVEVHVVRMA*VLLPWL
Trigger: AAGCCACGGCAGTAATACCAAGGCCATTCGCACAAC...GTGGACCTCAACTTCTGATTCCAGAACACGCCGGAGATTGCTGCTGCTTTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS GCA 90 bp AGTGAAAGAAAAATTGGGTTTCTCGGCACCACCCTGACGCTGCTCTaGCCCATATGCTTCTCATTATGGAACTGGGCTTCTCATCTGTCC +
Preference number: 5 (lower is better)
Translates to: SERKIGFLGTTLTLL*PICFSLWNWASHLS
Trigger: GGACAGATGAGAAGCCCAGTTCCATAATGAGAAGCATATGGGGCAGAGCAGCGTCAGGGTGGTGCCGAGAAACCCAATTTTTCTTTCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510365.5
CDS CCA 90 bp ATTCCTCAGTGGCAGGATCGTAGTGGGCAGTTGTGCGAATGGCCTTaGTATTACTGCCGTGGCTTAATTCGGTCAGAGCAAAACATCCAA +
Preference number: 5 (lower is better)
Translates to: IPQWQDRSGQLCEWP*YYCRGLIRSEQNIQ
Trigger: TTGGATGTTTTGCTCTGACCGAATTAAGCCACGGCAGTAATACCAAGGCCATTCGCACAACTGCCCACTACGATCCTGCCACTGAGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000510365.5
ENST00000514423.1
CDS-3UTR CAA 90 bp GCAGCAGCAATCTCCGGCGTGTTCTGGAATCAGAAGTTGAGGTCCACGTCTGATCTTCCTATGACAGGTTaGTTCACAGAAAACTCTGGC +
Preference number: 5 (lower is better)
Translates to: AAAISGVFWNQKLRSTSDLPMTG*FTENSG
Trigger: GCCAGAGTTTTCTGTGAACAAACCTGTCATAGGAAG...ATCAGACGTGGACCTCAACTTCTGATTCCAGAACACGCCGGAGATTGCTGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS GCA 90 bp TGGCAGGATCGTAGTGGGCAGTTGTGCGAATGGCCTTGGTATTACTaGCGTGGCTTAATTCGGTCAGAGCAAAACATCCAAAAATCTCCA +
Preference number: 5 (lower is better)
Translates to: WQDRSGQLCEWPWYY*RGLIRSEQNIQKSP
Trigger: TGGAGATTTTTGGATGTTTTGCTCTGACCGAATTAAGCCACGGCAGTAATACCAAGGCCATTCGCACAACTGCCCACTACGATCCTGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000510365.5
ENST00000514423.1
CDS-3UTR CAA 90 bp AGACATGATCATCTGCATTTCTTTTCCACGCTGCAAATCACCGCGATCCCAGATGCTGTCTTGCCCATGTaGCCAACCCAAAACTTGGCA +
Preference number: 5 (lower is better)
Translates to: RHDHLHFFSTLQITAIPDAVLPM*PTQNLA
Trigger: TGCCAAGTTTTGGGTTGGCAACATGGGCAAGACAGC...ATCTGGGATCGCGGTGATTTGCAGCGTGGAAAAGAAATGCAGATGATCATGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CAA 90 bp ATGATCATCTGCATTTCTTTTCCACGCTGCAAATCACCGCGATCCCAGATTAGTCTATGGAGGAGGTACTaGGCAGCCAGAGAAGAGTCA +
Preference number: 5 (lower is better)
Translates to: MIICISFPRCKSPRSQISLWRRY*AAREES
Trigger: TGACTCTTCTCTGGCTGCCAAGTACCTCCTCCATAG...ACTAATCTGGGATCGCGGTGATTTGCAGCGTGGAAAAGAAATGCAGATGATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS-3UTR CAA 90 bp GGAGAGTTGACAAAGAACCAGACTGGCATCATTGACTTCTCAATGAAGTGGAGCTTGCCAACCCAAAACTaGGCAGCTTCGAAATCAGGG +
Preference number: 5 (lower is better)
Translates to: GELTKNQTGIIDFSMKWSLPTQN*AASKSG
Trigger: CCCTGATTTCGAAGCTGCCAAGTTTTGGGTTGGCAA...GCTCCACTTCATTGAGAAGTCAATGATGCCAGTCTGGTTCTTTGTCAACTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356406.10
CDS-3UTR CAA 90 bp AGACATGATCATCTGCATTTCTTTTCCACGCTGCAAATCACCGCGATCCCAGATCGGTTGGAGACTGAATaGCCCATTCAAATCATTAGA +
Preference number: 5 (lower is better)
Translates to: RHDHLHFFSTLQITAIPDRLETE*PIQIIR
Trigger: TCTAATGATTTGAATGGGCAATTCAGTCTCCAACCG...ATCTGGGATCGCGGTGATTTGCAGCGTGGAAAAGAAATGCAGATGATCATGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356406.10
CDS-3UTR CAA 90 bp AACAGATGTTCCTCCTTAAGTCTTAAACCACGACATTCAGATGATCTATGTGCAAGCGCCATTGCTGCATaGGATACTCAAGCACTGGTA +
Preference number: 5 (lower is better)
Translates to: NRCSSLSLKPRHSDDLCASAIAA*DTQALV
Trigger: TACCAGTGCTTGAGTATCCAATGCAGCAATGGCGCT...TGCACATAGATCATCTGAATGTCGTGGTTTAAGACTTAAGGAGGAACATCTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356406.10
CDS CCA 72 bp CCCAGCACGGCCCGCAGCGAGGGCGGCACGGAAGGCTaGTGCACGTGCTCGTGGAACCTCTGGACCACCGTG +
Preference number: 6 (lower is better)
Translates to: PSTARSEGGTEG*CTCSWNLWTTV
Trigger: CACGGTGGTCCAGAGGTTCCACGAGCACGTGCACCAGCCTTCCGTGCCGCCCTCGCTGCGGGCCGTGCTGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000510365.5
CDS GCA 72 bp GCCCGCAGCGAGGGCGGCACGGAAGGCTGGTGCACGTaGTCGTGGAACCTCTGGACCACCGTGAGCTCCACG +
Preference number: 6 (lower is better)
Translates to: ARSEGGTEGWCT*SWNLWTTVSST
Trigger: CGTGGAGCTCACGGTGGTCCAGAGGTTCCACGAGCACGTGCACCAGCCTTCCGTGCCGCCCTCGCTGCGGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000510365.5
CDS GCA 72 bp AGCACGGCCCGCAGCGAGGGCGGCACGGAAGGCTGGTaGACGTGCTCGTGGAACCTCTGGACCACCGTGAGC +
Preference number: 6 (lower is better)
Translates to: STARSEGGTEGW*TCSWNLWTTVS
Trigger: GCTCACGGTGGTCCAGAGGTTCCACGAGCACGTGCACCAGCCTTCCGTGCCGCCCTCGCTGCGGGCCGTGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000510365.5
CDS GCA 72 bp GTCGGCCCGCGACCGACTCGGAGTACTGGGACTAGCTaGCCGCACAGCGCAGCTGTCTCTGGCCTGGCCCCA +
Preference number: 6 (lower is better)
Translates to: VGPRPTRSTGTS*PHSAAVSGLAP
Trigger: TGGGGCCAGGCCAGAGACAGCTGCGCTGTGCGGGCAGCTAGTCCCAGTACTCCGAGTCGGTCGCGGGCCGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503233.5
ENST00000514423.1
CDS TCA 72 bp GCTGGTGCACGTGCTCGTGGAACCTCTGGACCACCGTaGGCTCCACGAAGGCCAGCGCCAACGGACGGCCGT +
Preference number: 6 (lower is better)
Translates to: AGARARGTSGPP*APRRPAPTDGR
Trigger: ACGGCCGTCCGTTGGCGCTGGCCTTCGTGGAGCTCACGGTGGTCCAGAGGTTCCACGAGCACGTGCACCAGC
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000510365.5
CDS CCA 72 bp CACGAGGCCAGGGGCTTGCTGGCCGATGCCAGGGCGTaGATCTCACGTCCAAGCTCTGCCTGTCTGGCGCTG +
Preference number: 6 (lower is better)
Translates to: HEARGLLADARA*ISRPSSACLAL
Trigger: CAGCGCCAGACAGGCAGAGCTTGGACGTGAGATCCACGCCCTGGCATCGGCCAGCAAGCCCCTGGCCTCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000508302.1
ENST00000510365.5
CDS CCA 72 bp AGCGAGGGCGGCACGGAAGGCTGGTGCACGTGCTCGTaGAACCTCTGGACCACCGTGAGCTCCACGAAGGCC +
Preference number: 6 (lower is better)
Translates to: SEGGTEGWCTCS*NLWTTVSSTKA
Trigger: GGCCTTCGTGGAGCTCACGGTGGTCCAGAGGTTCCACGAGCACGTGCACCAGCCTTCCGTGCCGCCCTCGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000510365.5
CDS GCA 72 bp CATCGCGTGATAAGAGCCCAGCAGGCGCTCAGGGGATaGCTGTCGGCCCGCGACCGACTCGGAGTACTGGGA +
Preference number: 6 (lower is better)
Translates to: HRVIRAQQALRG*LSARDRLGVLG
Trigger: TCCCAGTACTCCGAGTCGGTCGCGGGCCGACAGGCATCCCCTGAGCGCCTGCTGGGCTCTTATCACGCGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503233.5
CDS CCA 72 bp TTCCTTGCTGGGTGGTCCACGAGGCCAGGGGCTTGCTaGCCGATGCCAGGGCGTGGATCTCACGTCCAAGCT +
Preference number: 6 (lower is better)
Translates to: FLAGWSTRPGAC*PMPGRGSHVQA
Trigger: AGCTTGGACGTGAGATCCACGCCCTGGCATCGGCCAGCAAGCCCCTGGCCTCGTGGACCACCCAGCAAGGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000508302.1
ENST00000510365.5
CDS CAA 72 bp GTGTCCTCCACACGCCTCCCGGCATTCCTGAATTCCTaGCTGGGTGGTCCACGAGGCCAGGGGCTTGCTGGC +
Preference number: 6 (lower is better)
Translates to: VSSTRLPAFLNS*LGGPRGQGLAG
Trigger: GCCAGCAAGCCCCTGGCCTCGTGGACCACCCAGCAAGGAATTCAGGAATGCCGGGAGGCGTGTGGAGGACAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000508302.1
ENST00000510365.5
CDS CAA 72 bp CTGCAGGGACTCAGAGGCCGCAGGGGGACTTGGTCCTaGGTGTCACCTCCAGCCGCTGTGGTTTCTGGCAGG +
Preference number: 6 (lower is better)
Translates to: LQGLRGRRGTWS*VSPPAAVVSGR
Trigger: CCTGCCAGAAACCACAGCGGCTGGAGGTGACACCAAGGACCAAGTCCCCCTGCGGCCTCTGAGTCCCTGCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515797.5
CDS CAA 90 bp CAGATAGCCGTGTCCTCCACACGCCTCCCGGCATTCCTGAATTCCTaGCTGGGTGGTCCACGAGGCCAGGGGCTTGCTGGCCGATGCCAG +
Preference number: 6 (lower is better)
Translates to: QIAVSSTRLPAFLNS*LGGPRGQGLAGRCQ
Trigger: CTGGCATCGGCCAGCAAGCCCCTGGCCTCGTGGACCACCCAGCAAGGAATTCAGGAATGCCGGGAGGCGTGTGGAGGACACGGCTATCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000508302.1
ENST00000510365.5
CDS GCA 72 bp TCCAAGCTCTGCCTGTCTGGCGCTGCGGTCTCCCGATaGAAGTCCTCGCTGGAGCTCCACCAGGTCCAGGAA +
Preference number: 6 (lower is better)
Translates to: SKLCLSGAAVSR*KSSLELHQVQE
Trigger: TTCCTGGACCTGGTGGAGCTCCAGCGAGGACTTGCATCGGGAGACCGCAGCGCCAGACAGGCAGAGCTTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000508302.1
ENST00000510365.5
CDS GCA 72 bp CACTTCTCCCGCCTGCTCACCGGAGAAGTATCCTCCTaGAAGCACAGCCTCGGTCACATGGGGGCTGGGTCC +
Preference number: 6 (lower is better)
Translates to: HFSRLLTGEVSS*KHSLGHMGAGS
Trigger: GGACCCAGCCCCCATGTGACCGAGGCTGTGCTTGCAGGAGGATACTTCTCCGGTGAGCAGGCGGGAGAAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512411.5
CDS CCA 72 bp AGGACGCTCTTGCTCGGTAGGCATCGAGGGGCCCCCTaGGGAATTCTGGGAGCAGAGCTGTGTCGCCTCCTT +
Preference number: 6 (lower is better)
Translates to: RTLLLGRHRGAP*GILGAELCRLL
Trigger: AAGGAGGCGACACAGCTCTGCTCCCAGAATTCCCCAGGGGGCCCCTCGATGCCTACCGAGCAAGAGCGTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
CDS CCA 72 bp TGTCTGGCGCTGCGGTCTCCCGATGCAAGTCCTCGCTaGAGCTCCACCAGGTCCAGGAAGAGCGACTTGGAG +
Preference number: 6 (lower is better)
Translates to: CLALRSPDASPR*SSTRSRKSDLE
Trigger: CTCCAAGTCGCTCTTCCTGGACCTGGTGGAGCTCCAGCGAGGACTTGCATCGGGAGACCGCAGCGCCAGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000508302.1
ENST00000510365.5
CDS GCA 72 bp AGGGTCTTCGGGTCCCGGATCTGCACGATAAAGGGATaGAGCCCATGGCACTGGTCCCCTGGCACACACAGC +
Preference number: 6 (lower is better)
Translates to: RVFGSRICTIKG*SPWHWSPGTHS
Trigger: GCTGTGTGTGCCAGGGGACCAGTGCCATGGGCTGCATCCCTTTATCGTGCAGATCCGGGACCCGAAGACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000510365.5
CDS GCA 72 bp TGGGAGCAGAGCTGTGTCGCCTCCTTCCACAGTGGATaGCATCGCGTGATAAGAGCCCAGCAGGCGCTCAGG +
Preference number: 6 (lower is better)
Translates to: WEQSCVASFHSG*HRVIRAQQALR
Trigger: CCTGAGCGCCTGCTGGGCTCTTATCACGCGATGGCATCCACTGTGGAAGGAGGCGACACAGCTCTGCTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503233.5
CDS GCA 72 bp ACTGGGCTTCTCATCTGTCCACAGCGCCATCCGCCGTaGTCAGTGAGTCCCGTGGAAGGAGGACGATGGTGC +
Preference number: 6 (lower is better)
Translates to: TGLLICPQRHPP*SVSPVEGGRWC
Trigger: GCACCATCGTCCTCCTTCCACGGGACTCACTGAGCACGGCGGATGGCGCTGTGGACAGATGAGAAGCCCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510365.5
CDS CCA 72 bp ATCCTCCTGCAGGGACTCAGAGGCCGCAGGGGGACTTaGTCCTTGGTGTCACCTCCAGCCGCTGTGGTTTCT +
Preference number: 6 (lower is better)
Translates to: ILLQGLRGRRGT*SLVSPPAAVVS
Trigger: AGAAACCACAGCGGCTGGAGGTGACACCAAGGACCAAGTCCCCCTGCGGCCTCTGAGTCCCTGCAGGAGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515797.5
CDS CAA 72 bp TATCCTCCTGCAGGGACTCAGAGGCCGCAGGGGGACTaGGTCCTTGGTGTCACCTCCAGCCGCTGTGGTTTC +
Preference number: 6 (lower is better)
Translates to: YPPAGTQRPQGD*VLGVTSSRCGF
Trigger: GAAACCACAGCGGCTGGAGGTGACACCAAGGACCAAGTCCCCCTGCGGCCTCTGAGTCCCTGCAGGAGGATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515797.5
CDS TCA 72 bp GCAGGAAGCAGCTTCCTAGATACAACACGGGGGCCCTaGCTCTGGGGAGGACAGCAAGCCCGCAGTCAGAAG +
Preference number: 6 (lower is better)
Translates to: AGSSFLDTTRGP*LWGGQQARSQK
Trigger: CTTCTGACTGCGGGCTTGCTGTCCTCCCCAGAGTCAGGGCCCCCGTGTTGTATCTAGGAAGCTGCTTCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510365.5
CDS TCA 72 bp TTCTCATCTGTCCACAGCGCCATCCGCCGTGCTCAGTaGGTCCCGTGGAAGGAGGACGATGGTGCAGGAAGC +
Preference number: 6 (lower is better)
Translates to: FSSVHSAIRRAQ*VPWKEDDGAGS
Trigger: GCTTCCTGCACCATCGTCCTCCTTCCACGGGACTCACTGAGCACGGCGGATGGCGCTGTGGACAGATGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510365.5
CDS GCA 72 bp AAAGCCAGGACGGCGCTCTCCAACACTTCTCCCGCCTaGTCACCGGAGAAGTATCCTCCTGCAGGGACTCAG +
Preference number: 6 (lower is better)
Translates to: KARTALSNTSPA*SPEKYPPAGTQ
Trigger: CTGAGTCCCTGCAGGAGGATACTTCTCCGGTGAGCAGGCGGGAGAAGTGTTGGAGAGCGCCGTCCTGGCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515797.5
CDS GCA 72 bp CCGTGCTCAGTGAGTCCCGTGGAAGGAGGACGATGGTaGAGGAAGCAGCTTCCTAGATACAACACGGGGGCC +
Preference number: 6 (lower is better)
Translates to: PCSVSPVEGGRW*RKQLPRYNTGA
Trigger: GGCCCCCGTGTTGTATCTAGGAAGCTGCTTCCTGCACCATCGTCCTCCTTCCACGGGACTCACTGAGCACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510365.5
CDS GCA 72 bp AAAGCCAGGACGGCGCTCTCCAACACTTCTCCCGCCTaGTCACCGGAGAAGTATCCTCCTGCAAGCACAGCC +
Preference number: 6 (lower is better)
Translates to: KARTALSNTSPA*SPEKYPPASTA
Trigger: GGCTGTGCTTGCAGGAGGATACTTCTCCGGTGAGCAGGCGGGAGAAGTGTTGGAGAGCGCCGTCCTGGCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512411.5
CDS CCA 72 bp TTTCCTCCTCCTCTGTGGGTCCAAACTGACGCCGAGTaGCTGAGAAGCGAAGAGCGATGGCCACGGCCAGCT +
Preference number: 6 (lower is better)
Translates to: FPPPLWVQTDAE*LRSEERWPRPA
Trigger: AGCTGGCCGTGGCCATCGCTCTTCGCTTCTCAGCCACTCGGCGTCAGTTTGGACCCACAGAGGAGGAGGAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000510365.5
CDS CCA 72 bp GGGTCCCGGATCTGCACGATAAAGGGATGCAGCCCATaGCACTGGTCCCCTGGCACACACAGCTTAGCAAAC +
Preference number: 6 (lower is better)
Translates to: GSRICTIKGCSP*HWSPGTHSLAN
Trigger: GTTTGCTAAGCTGTGTGTGCCAGGGGACCAGTGCCATGGGCTGCATCCCTTTATCGTGCAGATCCGGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000510365.5
CDS CCA 72 bp AGAGCCCGGCAGGCTGCCTGGCATGAGGGGGCCTTCTaGAAGTGTTCTCTGAACCGAACCCCAAGTGAAAGA +
Preference number: 6 (lower is better)
Translates to: RARQAAWHEGAF*KCSLNRTPSER
Trigger: TCTTTCACTTGGGGTTCGGTTCAGAGAACACTTCCAGAAGGCCCCCTCATGCCAGGCAGCCTGCCGGGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510365.5
CDS TCA 72 bp AGCACTGGTATTTCCTCCTCCTCTGTGGGTCCAAACTaGCGCCGAGTGGCTGAGAAGCGAAGAGCGATGGCC +
Preference number: 6 (lower is better)
Translates to: STGISSSSVGPN*RRVAEKRRAMA
Trigger: GGCCATCGCTCTTCGCTTCTCAGCCACTCGGCGTCAGTTTGGACCCACAGAGGAGGAGGAAATACCAGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000510365.5
CDS TCA 72 bp GTCAAGGATGCCGGGATAGGCGTCCAGAAAGTCCACTaGCTTCAGCGGACTGCGGAAGCAAGCTCCATCGTG +
Preference number: 6 (lower is better)
Translates to: VKDAGIGVQKVH*LQRTAEASSIV
Trigger: CACGATGGAGCTTGCTTCCGCAGTCCGCTGAAGTCAGTGGACTTTCTGGACGCCTATCCCGGCATCCTTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000508302.1
ENST00000510365.5
CDS GCA 72 bp TGGGAGCAGAGCTGTGTCGCCTCCTTCCACAGTGGATaGCATCGCGTGATAAGAGCCCACACACTCCACAGT +
Preference number: 6 (lower is better)
Translates to: WEQSCVASFHSG*HRVIRAHTLHS
Trigger: ACTGTGGAGTGTGTGGGCTCTTATCACGCGATGGCATCCACTGTGGAAGGAGGCGACACAGCTCTGCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS GCA 72 bp GATAGGCGTCCAGAAAGTCCACTGACTTCAGCGGACTaGGGAAGCAAGCTCCATCGTGGACCTGGTGTGCCA +
Preference number: 6 (lower is better)
Translates to: DRRPESPLTSAD*GSKLHRGPGVP
Trigger: TGGCACACCAGGTCCACGATGGAGCTTGCTTCCGCAGTCCGCTGAAGTCAGTGGACTTTCTGGACGCCTATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000508302.1
ENST00000510365.5
CDS GCA 72 bp CGCCCCAGAGGTTTTTGTAGAGCTCGCCGTCGGCTCTaGCAATCGGTGAGTCCAGAACAAAGTCAGGAGGAG +
Preference number: 6 (lower is better)
Translates to: RPRGFCRARRRL*QSVSPEQSQEE
Trigger: CTCCTCCTGACTTTGTTCTGGACTCACCGATTGGCAGAGCCGACGGCGAGCTCTACAAAAACCTCTGGGGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000512411.5
ENST00000515797.5
CDS GCA 72 bp AAAGTCAGGAGGAGCGATCACGTCTACCAGGGCAACTaGATCGTCTTTCAGCTCGGTAGAGCAGGGCCGCGT +
Preference number: 6 (lower is better)
Translates to: KVRRSDHVYQGN*IVFQLGRAGPR
Trigger: ACGCGGCCCTGCTCTACCGAGCTGAAAGACGATGCAGTTGCCCTGGTAGACGTGATCGCTCCTCCTGACTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413009.6
CDS CCA 72 bp CACGATAAAGGGATGCAGCCCATGGCACTGGTCCCCTaGCACACACAGCTTAGCAAACACCACCGCGTGAGT +
Preference number: 6 (lower is better)
Translates to: HDKGMQPMALVP*HTQLSKHHRVS
Trigger: ACTCACGCGGTGGTGTTTGCTAAGCTGTGTGTGCCAGGGGACCAGTGCCATGGGCTGCATCCCTTTATCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000510365.5
CDS CCA 72 bp CGGATCTGCACGATAAAGGGATGCAGCCCATGGCACTaGTCCCCTGGCACACACAGCTTAGCAAACACCACC +
Preference number: 6 (lower is better)
Translates to: RICTIKGCSPWH*SPGTHSLANTT
Trigger: GGTGGTGTTTGCTAAGCTGTGTGTGCCAGGGGACCAGTGCCATGGGCTGCATCCCTTTATCGTGCAGATCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000510365.5
CDS CCA 72 bp TCGGGGGTGACGTCTCCCATCCGGTTCAGAAGGCTCTaGCGAGGAACTCTGACCTTGTGGAACATGGCGAAA +
Preference number: 6 (lower is better)
Translates to: SGVTSPIRFRRL*RGTLTLWNMAK
Trigger: TTTCGCCATGTTCCACAAGGTCAGAGTTCCTCGCCAGAGCCTTCTGAACCGGATGGGAGACGTCACCCCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000510365.5
CDS CCA 72 bp CCAGGGCGACTGCAGAGTCCAAGCAGTCGGCAACACTaGAGACCTCAAACTTCTGGTCAAGGATGCCGGGAT +
Preference number: 6 (lower is better)
Translates to: PGRLQSPSSRQH*RPQTSGQGCRD
Trigger: ATCCCGGCATCCTTGACCAGAAGTTTGAGGTCTCCAGTGTTGCCGACTGCTTGGACTCTGCAGTCGCCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000508302.1
ENST00000510365.5
CDS CCA 72 bp TCTAGGCACTCCTGGCTCGTGTCTGTCTGTGCCTTATaGGACCTAGTGGGTGGGCTTCTGCTCTCTGCAGAG +
Preference number: 6 (lower is better)
Translates to: SRHSWLVSVCAL*DLVGGLLLSAE
Trigger: CTCTGCAGAGAGCAGAAGCCCACCCACTAGGTCCCATAAGGCACAGACAGACACGAGCCAGGAGTGCCTAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510365.5
CDS TCA 72 bp TCCCCTGGCACACACAGCTTAGCAAACACCACCGCGTaGGTGGCTGTCTTGCCCATGTTGCCAACCCAAAAC +
Preference number: 6 (lower is better)
Translates to: SPGTHSLANTTA*VAVLPMLPTQN
Trigger: GTTTTGGGTTGGCAACATGGGCAAGACAGCCACTCACGCGGTGGTGTTTGCTAAGCTGTGTGTGCCAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000510365.5
CDS TCA 72 bp TTGGCAGCCAGAGAAGAGTCATACATGCCCAGGCACTaGATCAAGGCGGGGACCTTCAGAGGGCTCTTGAAC +
Preference number: 6 (lower is better)
Translates to: LAAREESYMPRH*IKAGTFRGLLN
Trigger: GTTCAAGAGCCCTCTGAAGGTCCCCGCCTTGATTCAGTGCCTGGGCATGTATGACTCTTCTCTGGCTGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000514423.1
CDS TCA 72 bp AACACATCAGTGTCATTGCTGTCCCCAGCCCAGATGTaGCCCAAGGAATGTGCTGCTCAGGGGCCGAGTTCT +
Preference number: 6 (lower is better)
Translates to: NTSVSLLSPAQM*PKECAAQGPSS
Trigger: AGAACTCGGCCCCTGAGCAGCACATTCCTTGGGTCACATCTGGGCTGGGGACAGCAATGACACTGATGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512411.5
CDS GCA 72 bp CAAACACCACCGCGTGAGTGGCTGTCTTGCCCATGTTaGCAACCCAAAACTTGGCAGCTTCGAAATCAGGGG +
Preference number: 6 (lower is better)
Translates to: QTPPREWLSCPC*QPKTWQLRNQG
Trigger: CCCCTGATTTCGAAGCTGCCAAGTTTTGGGTTGGCAACATGGGCAAGACAGCCACTCACGCGGTGGTGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000510365.5
CDS GCA 72 bp CGTGATAAGAGCCCACACACTCCACAGTTCAACCCCTaGCAGGGAAACCAAAAGCAGGAAAGGATCTCCAGC +
Preference number: 6 (lower is better)
Translates to: RDKSPHTPQFNP*QGNQKQERISS
Trigger: GCTGGAGATCCTTTCCTGCTTTTGGTTTCCCTGGCAGGGGTTGAACTGTGGAGTGTGTGGGCTCTTATCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356406.10
ENST00000413009.6
CDS GCA 72 bp CGTGGACCTGGTGTGCCAGGAGACCCAGCAAATAGTTaGTTGTCTGCTGCAGCAGGATGTTGTTGTCACCTT +
Preference number: 6 (lower is better)
Translates to: RGPGVPGDPANS*LSAAAGCCCHL
Trigger: AAGGTGACAACAACATCCTGCTGCAGCAGACAAGCAACTATTTGCTGGGTCTCCTGGCACACCAGGTCCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000508302.1
ENST00000510365.5
CDS GCA 72 bp CGGCAACACTGGAGACCTCAAACTTCTGGTCAAGGATaGCGGGATAGGCGTCCAGAAAGTCCACTGACTTCA +
Preference number: 6 (lower is better)
Translates to: RQHWRPQTSGQG*RDRRPESPLTS
Trigger: TGAAGTCAGTGGACTTTCTGGACGCCTATCCCGGCATCCTTGACCAGAAGTTTGAGGTCTCCAGTGTTGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000508302.1
ENST00000510365.5
CDS CCA 72 bp CCTCAGTGGCAGGATCGTAGTGGGCAGTTGTGCGAATaGCCTTGGTATTACTGCCGTGGCTTAATTCGGTCA +
Preference number: 6 (lower is better)
Translates to: PQWQDRSGQLCE*PWYYCRGLIRS
Trigger: TGACCGAATTAAGCCACGGCAGTAATACCAAGGCCATTCGCACAACTGCCCACTACGATCCTGCCACTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000510365.5
ENST00000514423.1
CDS CCA 72 bp CGGTTCAGAAGGCTCTGGCGAGGAACTCTGACCTTGTaGAACATGGCGAAACCATTATCCAGACCGTTCTGC +
Preference number: 6 (lower is better)
Translates to: RFRRLWRGTLTL*NMAKPLSRPFC
Trigger: GCAGAACGGTCTGGATAATGGTTTCGCCATGTTCCACAAGGTCAGAGTTCCTCGCCAGAGCCTTCTGAACCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000510365.5
CDS CCA 72 bp AGGAAGCCTTCCAGTATTCCCAAGTCTAGGCACTCCTaGCTCGTGTCTGTCTGTGCCTTATGGGACCTAGTG +
Preference number: 6 (lower is better)
Translates to: RKPSSIPKSRHS*LVSVCALWDLV
Trigger: CACTAGGTCCCATAAGGCACAGACAGACACGAGCCAGGAGTGCCTAGACTTGGGAATACTGGAAGGCTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510365.5
CDS CAA 72 bp GGACCTGGTGTGCCAGGAGACCCAGCAAATAGTTGCTaGTCTGCTGCAGCAGGATGTTGTTGTCACCTTCGT +
Preference number: 6 (lower is better)
Translates to: GPGVPGDPANSC*SAAAGCCCHLR
Trigger: ACGAAGGTGACAACAACATCCTGCTGCAGCAGACAAGCAACTATTTGCTGGGTCTCCTGGCACACCAGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000508302.1
ENST00000510365.5
CDS CAA 90 bp CTCCATCGTGGACCTGGTGTGCCAGGAGACCCAGCAAATAGTTGCTaGTCTGCTGCAGCAGGATGTTGTTGTCACCTTCGTATGTGCAGT +
Preference number: 6 (lower is better)
Translates to: LHRGPGVPGDPANSC*SAAAGCCCHLRMCS
Trigger: ACTGCACATACGAAGGTGACAACAACATCCTGCTGCAGCAGACAAGCAACTATTTGCTGGGTCTCCTGGCACACCAGGTCCACGATGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000508302.1
ENST00000510365.5
CDS TCA 72 bp GTCCAGTCCAAAACCACCCCCAATACCAACATGCCCTaGGTGCACTTTCCAAATCGGCCATATAGGAGGCCT +
Preference number: 6 (lower is better)
Translates to: VQSKTTPNTNMP*VHFPNRPYRRP
Trigger: AGGCCTCCTATATGGCCGATTTGGAAAGTGCACTCAGGGCATGTTGGTATTGGGGGTGGTTTTGGACTGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512411.5
CDS GCA 72 bp GCTGGGTCCAGTCCAAAACCACCCCCAATACCAACATaGCCTGAGTGCACTTTCCAAATCGGCCATATAGGA +
Preference number: 6 (lower is better)
Translates to: AGSSPKPPPIPT*PECTFQIGHIG
Trigger: TCCTATATGGCCGATTTGGAAAGTGCACTCAGGGCATGTTGGTATTGGGGGTGGTTTTGGACTGGACCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512411.5
CDS CCA 72 bp TGGCAGGATCGTAGTGGGCAGTTGTGCGAATGGCCTTaGTATTACTGCCGTGGCTTAATTCGGTCAGAGCAA +
Preference number: 6 (lower is better)
Translates to: WQDRSGQLCEWP*YYCRGLIRSEQ
Trigger: TTGCTCTGACCGAATTAAGCCACGGCAGTAATACCAAGGCCATTCGCACAACTGCCCACTACGATCCTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000510365.5
ENST00000514423.1
CDS CCA 72 bp TTGGATACTCAAGCACTGGTATTTCCTCCTCCTCTGTaGGTCCAAACTGACGCCGAGTGGCTGAGAAGCGAA +
Preference number: 6 (lower is better)
Translates to: LDTQALVFPPPL*VQTDAEWLRSE
Trigger: TTCGCTTCTCAGCCACTCGGCGTCAGTTTGGACCCACAGAGGAGGAGGAAATACCAGTGCTTGAGTATCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000510365.5
CDS CAA 90 bp CTTGTCTGCTGCAGCAGGATGTTGTTGTCACCTTCGTATGTGCAGTaGGGATCGTTGTCATCTCTAAGGACACCCAACCGGTTCATGGCC +
Preference number: 6 (lower is better)
Translates to: LVCCSRMLLSPSYVQ*GSLSSLRTPNRFMA
Trigger: GGCCATGAACCGGTTGGGTGTCCTTAGAGATGACAACGATCCCAACTGCACATACGAAGGTGACAACAACATCCTGCTGCAGCAGACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000508302.1
ENST00000510365.5
CDS TCA 72 bp GGCCTTCTGGAAGTGTTCTCTGAACCGAACCCCAAGTaGAAGAAAAATTGGGTTTCTCGGCACCACCCTGAC +
Preference number: 6 (lower is better)
Translates to: GLLEVFSEPNPK*KKNWVSRHHPD
Trigger: GTCAGGGTGGTGCCGAGAAACCCAATTTTTCTTTCACTTGGGGTTCGGTTCAGAGAACACTTCCAGAAGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510365.5
CDS GCA 72 bp AAAATTGGGTTTCTCGGCACCACCCTGACGCTGCTCTaGCCCATATGCTTCTCATTATGGAACTGGGCTTCT +
Preference number: 6 (lower is better)
Translates to: KIGFLGTTLTLL*PICFSLWNWAS
Trigger: AGAAGCCCAGTTCCATAATGAGAAGCATATGGGGCAGAGCAGCGTCAGGGTGGTGCCGAGAAACCCAATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510365.5
CDS CCA 72 bp CTGCTGATCCAAAAACCAAGCTATGGAGGAGGTACTTaGCAGCCAGAGAAGAGTCATACATGCCCAGGCACT +
Preference number: 6 (lower is better)
Translates to: LLIQKPSYGGGT*QPEKSHTCPGT
Trigger: AGTGCCTGGGCATGTATGACTCTTCTCTGGCTGCCAAGTACCTCCTCCATAGCTTGGTTTTTGGATCAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000510365.5
ENST00000514423.1
CDS CCA 72 bp AAGCAAGCGCCATTGCTGCATTGGATACTCAAGCACTaGTATTTCCTCCTCCTCTGTGGGTCCAAACTGACG +
Preference number: 6 (lower is better)
Translates to: KQAPLLHWILKH*YFLLLCGSKLT
Trigger: CGTCAGTTTGGACCCACAGAGGAGGAGGAAATACCAGTGCTTGAGTATCCAATGCAGCAATGGCGCTTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000510365.5
CDS CCA 72 bp TGCACTTTCCAAATCGGCCATATAGGAGGCCTGTTTTaGGTGAACACATCAGTGTCATTGCTGTCCCCAGCC +
Preference number: 6 (lower is better)
Translates to: CTFQIGHIGGLF*VNTSVSLLSPA
Trigger: GGCTGGGGACAGCAATGACACTGATGTGTTCACCCAAAACAGGCCTCCTATATGGCCGATTTGGAAAGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512411.5
CDS CAA 72 bp ACTGCTGATCCAAAAACCAAGCTATGGAGGAGGTACTaGGCAGCCAGAGAAGAGTCATACATGCCCAGGCAC +
Preference number: 6 (lower is better)
Translates to: TADPKTKLWRRY*AAREESYMPRH
Trigger: GTGCCTGGGCATGTATGACTCTTCTCTGGCTGCCAAGTACCTCCTCCATAGCTTGGTTTTTGGATCAGCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000510365.5
ENST00000514423.1
CDS CAA 72 bp TGCAGCAGGATGTTGTTGTCACCTTCGTATGTGCAGTaGGGATCGTTGTCATCTCTAAGGACACCCAACCGG +
Preference number: 6 (lower is better)
Translates to: CSRMLLSPSYVQ*GSLSSLRTPNR
Trigger: CCGGTTGGGTGTCCTTAGAGATGACAACGATCCCAACTGCACATACGAAGGTGACAACAACATCCTGCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000508302.1
ENST00000510365.5
CDS CAA 72 bp GTGCACTTTCCAAATCGGCCATATAGGAGGCCTGTTTaGGGTGAACACATCAGTGTCATTGCTGTCCCCAGC +
Preference number: 6 (lower is better)
Translates to: VHFPNRPYRRPV*GEHISVIAVPS
Trigger: GCTGGGGACAGCAATGACACTGATGTGTTCACCCAAAACAGGCCTCCTATATGGCCGATTTGGAAAGTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512411.5
CDS GCA 72 bp CGTAGTGGGCAGTTGTGCGAATGGCCTTGGTATTACTaGCGTGGCTTAATTCGGTCAGAGCAAAACATCCAA +
Preference number: 6 (lower is better)
Translates to: RSGQLCEWPWYY*RGLIRSEQNIQ
Trigger: TTGGATGTTTTGCTCTGACCGAATTAAGCCACGGCAGTAATACCAAGGCCATTCGCACAACTGCCCACTACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000510365.5
ENST00000514423.1
CDS GCA 72 bp AGTCCAAAACCACCCCCAATACCAACATGCCCTGAGTaGACTTTCCAAATCGGCCATATAGGAGGCCTGTTT +
Preference number: 6 (lower is better)
Translates to: SPKPPPIPTCPE*TFQIGHIGGLF
Trigger: AAACAGGCCTCCTATATGGCCGATTTGGAAAGTGCACTCAGGGCATGTTGGTATTGGGGGTGGTTTTGGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512411.5
CDS CAA 72 bp TCTTCGACACTGAGGAAGTCATACTCGAAGATCCGCTaGCATCGAAGGAAGTTCAGCTCGCGATACTTCTCC +
Preference number: 6 (lower is better)
Translates to: SSTLRKSYSKIR*HRRKFSSRYFS
Trigger: GGAGAAGTATCGCGAGCTGAACTTCCTTCGATGCAAGCGGATCTTCGAGTATGACTTCCTCAGTGTCGAAGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000514423.1
CDS CAA 72 bp ATGTTGTTGTCACCTTCGTATGTGCAGTTGGGATCGTaGTCATCTCTAAGGACACCCAACCGGTTCATGGCC +
Preference number: 6 (lower is better)
Translates to: MLLSPSYVQLGS*SSLRTPNRFMA
Trigger: GGCCATGAACCGGTTGGGTGTCCTTAGAGATGACAACGATCCCAACTGCACATACGAAGGTGACAACAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000508302.1
ENST00000510365.5
CDS TCA 72 bp CAAGTGAAAGAAAAATTGGGTTTCTCGGCACCACCCTaGCGCTGCTCTGCCCCATATGCTTCTCATTATGGA +
Preference number: 6 (lower is better)
Translates to: QVKEKLGFSAPP*RCSAPYASHYG
Trigger: TCCATAATGAGAAGCATATGGGGCAGAGCAGCGTCAGGGTGGTGCCGAGAAACCCAATTTTTCTTTCACTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510365.5
CDS CAA 90 bp TTGAACATGTCTTCGACACTGAGGAAGTCATACTCGAAGATCCGCTaGCATCGAAGGAAGTTCAGCTCGCGATACTTCTCCAAGGACAGA +
Preference number: 6 (lower is better)
Translates to: LNMSSTLRKSYSKIR*HRRKFSSRYFSKDR
Trigger: TCTGTCCTTGGAGAAGTATCGCGAGCTGAACTTCCTTCGATGCAAGCGGATCTTCGAGTATGACTTCCTCAGTGTCGAAGACATGTTCAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000514423.1
CDS CCA 72 bp TGGGCAGTTGTGCGAATGGCCTTGGTATTACTGCCGTaGCTTAATTCGGTCAGAGCAAAACATCCAAAAATC +
Preference number: 6 (lower is better)
Translates to: WAVVRMALVLLP*LNSVRAKHPKI
Trigger: GATTTTTGGATGTTTTGCTCTGACCGAATTAAGCCACGGCAGTAATACCAAGGCCATTCGCACAACTGCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356406.10
ENST00000413009.6
ENST00000503233.5
ENST00000510365.5
ENST00000514423.1